BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005802
(676 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359475162|ref|XP_003631603.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g18840-like [Vitis vinifera]
Length = 670
Score = 956 bits (2471), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/672 (67%), Positives = 540/672 (80%), Gaps = 3/672 (0%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
MRS+ K+ H AIK G+T T T+NQLIH+YSKH L E+ KLFDEMPERNVF+WN
Sbjct: 1 MRSI--KDGFRFHAHAIKNGITSTVFTSNQLIHLYSKHGFLAEAHKLFDEMPERNVFTWN 58
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
II A IK+ +LKQAR LFDS+P KDLVTYNSML GYIN +GYE +ALKLFIEMQS ++
Sbjct: 59 AIIWAYIKTQNLKQARELFDSAPSKDLVTYNSMLSGYINTDGYETNALKLFIEMQSLNDE 118
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
R+DEF++T LNL KL +G+QLH++MVKT+N+ SGFAVSSLIDMYSKC C+ E C
Sbjct: 119 TRIDEFSLTRMLNLSAKLSMESYGKQLHSYMVKTANNISGFAVSSLIDMYSKCGCFREVC 178
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+VF+GC ++L+SKNAMVAACCREGE+EM + FWR ELND VSWNTLISGYVQNG
Sbjct: 179 QVFDGCAGVLDLVSKNAMVAACCREGELEMGVNLFWRDLELNDVVSWNTLISGYVQNGCE 238
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
E+ LKLFV M EN VRWNEHT A LSAC GLR++K KE+H WVLK L NPF+SSG+
Sbjct: 239 EDALKLFVHMEENEVRWNEHTIAGLLSACAGLRSLKLGKEVHGWVLKYELGFNPFISSGL 298
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
VDVYCKC NM YAE + G N+FSI+SMIVG+S QGNM EARR FDSLTEK+ ++WT
Sbjct: 299 VDVYCKCGNMKYAELVYATIGTGNAFSITSMIVGHSSQGNMGEARRLFDSLTEKSSIIWT 358
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
ALF+GYVK+Q CEA+F+LLSEF KE +V DALIL+ +LGACA+QAAL+PGK+IHAY+LR
Sbjct: 359 ALFTGYVKSQQCEAVFELLSEFRVKEAMVPDALILISVLGACAIQAALNPGKQIHAYVLR 418
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
+G+++D+KL+S +VDMYSK GN+ YAE IFQ RD V+YN+M A YAHHGHE +AI
Sbjct: 419 IGIELDEKLVSAMVDMYSKSGNIKYAEKIFQRVTNRDAVIYNIMTAGYAHHGHENQAIQQ 478
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
FEEMLE+G++PDAVTFVA+LSA RHCG VE+GEKYF SMT DY I PE DHYACMIDLYG
Sbjct: 479 FEEMLERGVRPDAVTFVALLSACRHCGLVELGEKYFASMT-DYNILPEIDHYACMIDLYG 537
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQ 600
RANQLEKA+ FMK IP E DAVILG+FLN CR+NRN +LA EAEEK+LR+EG+N ARYVQ
Sbjct: 538 RANQLEKAVAFMKRIPIEPDAVILGAFLNACRINRNTKLAREAEEKILRIEGDNGARYVQ 597
Query: 601 LANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSV 660
LANVYAAEG W EMGRIR++MR + +FAGCSWVYVE+ +HIFT GD SH AIYS+
Sbjct: 598 LANVYAAEGKWVEMGRIRRKMRENEIKKFAGCSWVYVENRVHIFTSGDSSHSSAEAIYSI 657
Query: 661 LAIFTGELYEIA 672
L I T EL + A
Sbjct: 658 LLILTAELNDTA 669
>gi|224080303|ref|XP_002306089.1| predicted protein [Populus trichocarpa]
gi|222849053|gb|EEE86600.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 946 bits (2444), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/678 (66%), Positives = 547/678 (80%), Gaps = 5/678 (0%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
MRSL K+ L+ HV++IK+G TL +T+NQL+H+YSKH L+ E++KLFDEMP+RN +SWN
Sbjct: 1 MRSL--KDGLMRHVRSIKSGFTLPILTSNQLVHLYSKHCLINEAQKLFDEMPQRNTYSWN 58
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
TIISA IKS +L QA+S+FDS+ +DLVTYNSML GY++ +GYE +AL+LF+EMQS
Sbjct: 59 TIISAHIKSQNLAQAKSIFDSASVRDLVTYNSMLSGYVSVDGYERNALELFVEMQSIRNE 118
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
I +D+ T+TS +NL KL N +GRQLH++MVKT ND SGF VSSLIDMYSKC C++EAC
Sbjct: 119 IEIDDLTITSMVNLFSKLCNSCYGRQLHSYMVKTGNDRSGFVVSSLIDMYSKCGCFKEAC 178
Query: 181 RVFEGCTEE--VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
+VF+GC E +L+SKNAMVAA CREG+MEMAL+ FWR+ ELND+VSWNTLISGYVQNG
Sbjct: 179 QVFKGCEREGGFDLVSKNAMVAAYCREGDMEMALRLFWRESELNDSVSWNTLISGYVQNG 238
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
E LKLFV MGENGV+WNEHTF S LSAC LRN+K KE+H+W+LKNGL S+ FV S
Sbjct: 239 YPVEALKLFVCMGENGVKWNEHTFGSVLSACADLRNLKIGKEMHAWILKNGLGSSAFVES 298
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
GIVDVYCKC NM YAES+LL +GVR+SFSI+SMIVG+S QGNM EA R FDSL EKN +V
Sbjct: 299 GIVDVYCKCGNMKYAESLLLTRGVRSSFSITSMIVGFSSQGNMVEACRLFDSLEEKNSIV 358
Query: 359 WTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
W ALFSGYVK + CEA F+LL E++ KE + DALIL+ CA QAAL PGK+IH Y+
Sbjct: 359 WAALFSGYVKLKQCEAFFELLREYIAKEAAIPDALILISAFNVCAFQAALGPGKQIHGYV 418
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
RMG++MD K + ++DMYSKCG++ YAE +F IERDLVLYNVM+A YAHHGHE KAI
Sbjct: 419 FRMGIEMDMKTTTAMIDMYSKCGSIPYAEKLFLKVIERDLVLYNVMLAGYAHHGHEIKAI 478
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
LF+EMLE+G+ PDAVTFVA+LSA RH G V++GEK F SMT DY I PETDHYACMIDL
Sbjct: 479 NLFQEMLERGVGPDAVTFVALLSACRHRGLVDLGEKTFYSMTEDYHILPETDHYACMIDL 538
Query: 539 YGRANQLEKAIEFMKSIPTE-EDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKAR 597
YGRA+QLEK + FM+ IP E +DA ++G+F N CRLN N ELA EAEEKLL +EG++ AR
Sbjct: 539 YGRASQLEKMVLFMQRIPMEHQDAAVVGAFFNACRLNNNTELAKEAEEKLLNIEGDSGAR 598
Query: 598 YVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
YVQLANVYAAEGNWAEMGRIR++MRG + +FAGCSWVY+++E+H FT GD +H K +I
Sbjct: 599 YVQLANVYAAEGNWAEMGRIRREMRGKEAKKFAGCSWVYLDNEVHSFTSGDRTHTKAESI 658
Query: 658 YSVLAIFTGELYEIAGAF 675
YS+L ELYEIAGAF
Sbjct: 659 YSMLEFLMAELYEIAGAF 676
>gi|224080297|ref|XP_002306087.1| predicted protein [Populus trichocarpa]
gi|222849051|gb|EEE86598.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 941 bits (2431), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/678 (66%), Positives = 544/678 (80%), Gaps = 5/678 (0%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
MRSL K+ L+ HV++IK+G TL +T+NQL+H+YSKH L+ E++KLFDEMP+RN +SWN
Sbjct: 1 MRSL--KDGLMRHVRSIKSGFTLPILTSNQLVHLYSKHCLINEAQKLFDEMPQRNTYSWN 58
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
TIISA IKS +L QA+S+FDS+ +DLVTYNSML GY++ +GYE +AL+LF+EMQS
Sbjct: 59 TIISAHIKSQNLAQAKSIFDSASVRDLVTYNSMLSGYVSVDGYERNALELFVEMQSKRNE 118
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
I +D+ T+TS +NL KL N +GRQLH++MVKT ND SGF VSSLIDMYSKC C++EAC
Sbjct: 119 IEIDDLTITSMVNLFSKLCNSCYGRQLHSYMVKTGNDRSGFVVSSLIDMYSKCGCFKEAC 178
Query: 181 RVFEGCTEE--VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
+VF+GC E +L+SKNAMVAA CREG+MEMAL+ FWR+ ELND+VSWNTLISGYVQNG
Sbjct: 179 QVFKGCEREGGFDLVSKNAMVAAYCREGDMEMALRLFWRESELNDSVSWNTLISGYVQNG 238
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
E LKLFV MGENGV+WNEHTF S LSAC LRN+K KE+H+W+LKNGL S+ FV S
Sbjct: 239 YPVEALKLFVCMGENGVKWNEHTFGSVLSACADLRNLKIGKEMHAWILKNGLGSSAFVES 298
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
GIVDVYCKC NM YAES+ L +GVR+SFSI+SMIVGYS QGNM EA R FDSL EKN +V
Sbjct: 299 GIVDVYCKCGNMKYAESLHLTRGVRSSFSITSMIVGYSSQGNMVEACRLFDSLEEKNSIV 358
Query: 359 WTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
W ALFSGYVK + CEA F+LL E++ KE + DALIL+ CA QAAL PGK+IH Y+
Sbjct: 359 WAALFSGYVKLKQCEAFFELLREYIAKEAAIPDALILINAFNVCAFQAALGPGKQIHGYV 418
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
RMG++MD K + ++DMYSKCG++ YAE +F IERDLVLYNVM+A YAHHGHE KAI
Sbjct: 419 FRMGIEMDMKTTTAMIDMYSKCGSIPYAEKLFLKVIERDLVLYNVMLAGYAHHGHEIKAI 478
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
LF+EMLE+G+ PDAVTFVA+LSA RH G V++GEK F SMT DY I PETDHYACMIDL
Sbjct: 479 NLFQEMLERGVGPDAVTFVALLSACRHRGLVDLGEKTFYSMTEDYHILPETDHYACMIDL 538
Query: 539 YGRANQLEKAIEFMKSIPTE-EDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKAR 597
YGRA+QLEK + FM+ IP E +DA ++G+F N CRLN N ELA EAEEKLL +EG++ AR
Sbjct: 539 YGRASQLEKMVLFMQRIPVEHQDAAVVGAFFNACRLNNNTELAKEAEEKLLNIEGDSGAR 598
Query: 598 YVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
YVQLANVYAAEGNWAEMGRI ++MRG + +FAGCSWVY+++E+H FT GD +H K +I
Sbjct: 599 YVQLANVYAAEGNWAEMGRISREMRGKEAKKFAGCSWVYLDNEVHSFTSGDRTHTKAESI 658
Query: 658 YSVLAIFTGELYEIAGAF 675
YS L ELYEIAGAF
Sbjct: 659 YSKLEFLMAELYEIAGAF 676
>gi|224103443|ref|XP_002313059.1| predicted protein [Populus trichocarpa]
gi|222849467|gb|EEE87014.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 916 bits (2368), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/678 (65%), Positives = 534/678 (78%), Gaps = 5/678 (0%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
MRSL + LI HV++IK+G TL +T+NQLIH+YSKH L+ E++KLFDEMP RN++SWN
Sbjct: 1 MRSLRV--GLIHHVRSIKSGFTLPILTSNQLIHLYSKHCLINEAQKLFDEMPRRNIYSWN 58
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
TIISA +KS +L QA+S+FDS+ +DLVTYNSML GY + +GYE +AL+LF+EM S
Sbjct: 59 TIISAHVKSQNLAQAKSIFDSASVRDLVTYNSMLSGYADVDGYERNALELFVEMHSKSND 118
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
I +D+FTVTS + L KL N+ +G QLH++MVKT ND SGF VSSLIDMYSKC CY+EAC
Sbjct: 119 IGVDDFTVTSMVKLFAKLSNLCYGMQLHSYMVKTGNDRSGFVVSSLIDMYSKCGCYKEAC 178
Query: 181 RVFEGCTEE--VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
+F G +E ++L+SKNAMVAACCREGEMEMAL FWR+ ELND+VSWNTLISGYVQNG
Sbjct: 179 GIFRGSEKEGGIDLVSKNAMVAACCREGEMEMALGLFWRENELNDSVSWNTLISGYVQNG 238
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
E LKLFV MGENGV+WNEHTF S LSAC LRN+K KE+H+W+LKNGL S+ FV S
Sbjct: 239 YPLEALKLFVCMGENGVKWNEHTFGSVLSACADLRNLKIGKEMHAWILKNGLSSSAFVES 298
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
GIVDVYCK NM YAES L G +SFSI+SMIVGYS QGNM EA R FDSL EKN +V
Sbjct: 299 GIVDVYCKGGNMKYAESFHLTSGTGSSFSITSMIVGYSSQGNMVEACRLFDSLEEKNSIV 358
Query: 359 WTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
W ALF GYVK CEA+F+LL ++ KE + DALILV L CA QAAL PGK+IH Y+
Sbjct: 359 WAALFGGYVKLNQCEAIFELLCLYIAKEAAIPDALILVSALSVCAFQAALGPGKQIHGYV 418
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
RMG++MD K+ + ++DMYSKCG++ YAE +F IERDLVLYNVM+A YAHHG+E KAI
Sbjct: 419 YRMGIEMDIKMTTAMIDMYSKCGSIPYAEKMFLKVIERDLVLYNVMVAGYAHHGYEIKAI 478
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
LF+EMLE+G+ PDA+TFVA+LSA RH G V++GE+ F SMT DY I PETDHYACMIDL
Sbjct: 479 NLFQEMLERGVGPDAITFVALLSACRHRGLVDLGERTFYSMTEDYLILPETDHYACMIDL 538
Query: 539 YGRANQLEKAIEFMKSIPTE-EDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKAR 597
YGRA+QLEK + FM+ IP E +DA + G+F N CRLN+N ELA EAEEKLL++EG++ AR
Sbjct: 539 YGRASQLEKMVLFMQRIPIEYQDAAVAGAFFNACRLNKNTELAREAEEKLLKIEGDSGAR 598
Query: 598 YVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
YVQLAN YAAEGNWAEMGRIRK+MRG + +FAGCSWVY+++ +H F GD +H K I
Sbjct: 599 YVQLANAYAAEGNWAEMGRIRKEMRGKEAKKFAGCSWVYLDNGVHTFISGDRTHSKAVCI 658
Query: 658 YSVLAIFTGELYEIAGAF 675
YS+L T ELYEIAG F
Sbjct: 659 YSMLDFLTSELYEIAGVF 676
>gi|449493040|ref|XP_004159175.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g18840-like [Cucumis sativus]
Length = 1096
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/664 (62%), Positives = 528/664 (79%), Gaps = 1/664 (0%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+LK L+CH+Q IK+G T T +NQLI Y+KH LL +++KLFDEMPERNVFSWN II+
Sbjct: 426 HLKHGLLCHLQGIKSGFTPTIFMSNQLITFYAKHGLLNDAQKLFDEMPERNVFSWNAIIA 485
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
A +KS +L+QAR+LFDS+ KDLVTYNSML GY ++GY+ AL F+EMQ+A + IR+D
Sbjct: 486 AYVKSQNLRQARALFDSAVCKDLVTYNSMLSGYARSDGYQGQALGFFMEMQTAPDMIRID 545
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
EFT+ + LNL KL + +G+QLH+FM+KT+ND + FA SSLIDMYSKC ++EACRV+
Sbjct: 546 EFTLITMLNLTAKLCVISYGKQLHSFMLKTANDLTVFAASSLIDMYSKCGFFKEACRVYY 605
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
GC E V+ +S+NAMVAACCREGE+++AL FW++ E ND V+WNT+ISG+VQNG EE L
Sbjct: 606 GCGEVVDSVSRNAMVAACCREGEIDVALDLFWKELEQNDVVAWNTMISGFVQNGYEEESL 665
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
KLFVRM + V WNEHTFAS LSAC LR++K KE+H++VLKN LI+NPF+ SG+VDVY
Sbjct: 666 KLFVRMADEKVGWNEHTFASVLSACSNLRSLKLGKEVHAYVLKNRLIANPFICSGLVDVY 725
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
CKC NM YAES+ ++N +SI+SMIVGYS QGNM EAR+ FDSL EKN VVWTALF
Sbjct: 726 CKCNNMRYAESVNSELRMQNVYSITSMIVGYSSQGNMAEARKLFDSLDEKNSVVWTALFF 785
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
GYVK Q CEA+F+LLSE+ KE V D LIL+ ++GACA+QAAL PGK+IH+Y+LR G++
Sbjct: 786 GYVKLQQCEAVFELLSEY-RKEAKVPDVLILISIIGACAIQAALVPGKQIHSYMLRAGIK 844
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
+D KL S+LVDMYSKCG++ YAE IF+ ++D ++YN+MIA YAHHG E +A+ LF+EM
Sbjct: 845 LDTKLTSSLVDMYSKCGSIIYAERIFREVTDKDSIIYNIMIAGYAHHGWENEAVQLFKEM 904
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
++ G KPDA+TFVA+LSA RH G VE+GE +F+SM+ DY I PE DHYACMIDLYGRANQ
Sbjct: 905 VKHGFKPDAITFVALLSACRHGGLVELGEHFFDSMSNDYNICPEIDHYACMIDLYGRANQ 964
Query: 545 LEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANV 604
L+KA+EFM+ IP + DAVI G+FLN CR+N NAELA +AE++LL +EG N +RYVQLANV
Sbjct: 965 LDKALEFMRKIPIQLDAVIWGAFLNACRINGNAELARKAEDELLVIEGENGSRYVQLANV 1024
Query: 605 YAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIF 664
YAAEGNW EMGRIRK+M+G + + AGCSWV+VE + H+F GD H K AIYS LA
Sbjct: 1025 YAAEGNWEEMGRIRKKMKGKEVKKNAGCSWVFVESKFHVFISGDRFHSKNEAIYSTLASL 1084
Query: 665 TGEL 668
T EL
Sbjct: 1085 TDEL 1088
>gi|449461160|ref|XP_004148310.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g18840-like [Cucumis
sativus]
Length = 1096
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/664 (62%), Positives = 528/664 (79%), Gaps = 1/664 (0%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+LK L+CH+Q IK+G T T +NQLI Y+KH LL +++KLFDEMPERNVFSWN II+
Sbjct: 426 HLKHGLLCHLQGIKSGFTPTIFMSNQLITFYAKHGLLNDAQKLFDEMPERNVFSWNAIIA 485
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
A +KSH+L+QAR+LFDS+ KDLVTYNSML GY ++GY+ AL F+EMQ+A + IR+D
Sbjct: 486 AYVKSHNLRQARALFDSAVCKDLVTYNSMLSGYARSDGYQGQALGFFMEMQTAPDMIRID 545
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
EFT+ + LNL KL + +G+QLH+FM+KT+ND + FA SSLIDMYSKC ++EACRV+
Sbjct: 546 EFTLITMLNLTAKLCVISYGKQLHSFMLKTANDLTVFAASSLIDMYSKCGFFKEACRVYY 605
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
GC E V+ +S+NAMVAACCREGE+++AL FW++ E ND V+WNT+ISG+VQNG EE L
Sbjct: 606 GCGEVVDSVSRNAMVAACCREGEIDVALDLFWKELEQNDVVAWNTMISGFVQNGYEEESL 665
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
KLFVRM + V WNEHTFAS LSAC LR++K KE+H++VLKN LI+NPF+ SG+VDVY
Sbjct: 666 KLFVRMADEKVGWNEHTFASVLSACSNLRSLKLGKEVHAYVLKNRLIANPFICSGLVDVY 725
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
CKC NM YA+S+ ++N +SI+SMIVGYS QGNM EAR+ FDSL EKN VWTALF
Sbjct: 726 CKCNNMRYAKSVNSELRMQNVYSITSMIVGYSSQGNMAEARKLFDSLDEKNSAVWTALFF 785
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
GYVK Q CEA+F+LLSE+ KE V D LIL+ ++GACA+QAAL PGK+IH+Y+LR G++
Sbjct: 786 GYVKLQQCEAVFELLSEY-RKEAKVPDVLILISIIGACAIQAALVPGKQIHSYMLRAGIK 844
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
+D KL S+LVDMYSKCG++ YAE IF+ ++D ++YN+MIA YAHHG E +A+ LF+EM
Sbjct: 845 LDTKLTSSLVDMYSKCGSIIYAERIFREVTDKDSIIYNIMIAGYAHHGWENEAVQLFKEM 904
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
++ G KPDA+TFVA+LSA RH G VE+GE +F+SM+ DY I PE DHYACMIDLYGRANQ
Sbjct: 905 VKHGFKPDAITFVALLSACRHGGLVELGEHFFDSMSNDYNICPEIDHYACMIDLYGRANQ 964
Query: 545 LEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANV 604
L+KA+EFM+ IP + DAVI G+FLN CR+N NAELA +AE++LL +EG N +RYVQLANV
Sbjct: 965 LDKALEFMRKIPIQLDAVIWGAFLNACRINGNAELARKAEDELLVIEGENGSRYVQLANV 1024
Query: 605 YAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIF 664
YAAEGNW EMGRIRK+M+G + + AGCSWV+VE + H+F GD H K AIYS LA
Sbjct: 1025 YAAEGNWEEMGRIRKKMKGKEVKKNAGCSWVFVESKFHVFISGDRFHSKNEAIYSTLASL 1084
Query: 665 TGEL 668
T EL
Sbjct: 1085 TDEL 1088
>gi|356541109|ref|XP_003539025.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g18840-like [Glycine max]
Length = 681
Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/659 (60%), Positives = 506/659 (76%), Gaps = 3/659 (0%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
HVQAIK+GL + T NQLIH+YS H LL+E+ KLFDEMP NVFSWN II A IK+H+L
Sbjct: 6 HVQAIKSGLVSSIFTCNQLIHLYSNHGLLQEAHKLFDEMPHPNVFSWNAIIMAYIKAHNL 65
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
QAR+LFDS+ H+DLV+YNS+L Y+ ++GYE +AL LF MQSA + I +DE T+T+ L
Sbjct: 66 TQARALFDSASHRDLVSYNSLLSAYVGSDGYETEALDLFTRMQSARDTIGIDEITLTNML 125
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
NL KL + +G+Q+H++MVKT+ND S FA+SSLIDMYSKC C++EAC +F C E V+L
Sbjct: 126 NLAAKLRVLCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGCFQEACNLFGSCDEMVDL 185
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+SKNAMVAACCREG+M+MAL FW+ PEL D VSWNTLI+GY QNG E+ L FV M E
Sbjct: 186 VSKNAMVAACCREGKMDMALNVFWKNPELKDTVSWNTLIAGYSQNGYMEKSLTFFVEMIE 245
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
NG+ +NEHT AS L+AC L+ K K +H+WVLK G SN F+SSG+VD Y KC N+ Y
Sbjct: 246 NGIDFNEHTLASVLNACSALKCSKLGKSVHAWVLKKGYSSNQFISSGVVDFYSKCGNIRY 305
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
AE + G+++ F+++S+I YS QGNM EA+R FDSL E+N VVWTAL SGYVK+Q C
Sbjct: 306 AELVYAKIGIKSPFAVASLIAAYSSQGNMTEAQRLFDSLLERNSVVWTALCSGYVKSQQC 365
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
EA+F L EF TKE +V DA+I+V +LGACA+QA L GK+IHAYILRM ++DKKL+S+
Sbjct: 366 EAVFKLFREFRTKEALVPDAMIIVSILGACAIQADLSLGKQIHAYILRMRFKVDKKLLSS 425
Query: 433 LVDMYSKCGNMTYAEIIFQNFI--ERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
LVDMYSKCGN+ YAE +F+ +RD +LYNV+IA YAHHG E KAI LF+EML K +K
Sbjct: 426 LVDMYSKCGNVAYAEKLFRLVTDSDRDAILYNVIIAGYAHHGFENKAIELFQEMLNKSVK 485
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
PDAVTFVA+LSA RH G VE+GE++F SM Y + PE HYACM+D+YGRANQLEKA+E
Sbjct: 486 PDAVTFVALLSACRHRGLVELGEQFFMSME-HYNVLPEIYHYACMVDMYGRANQLEKAVE 544
Query: 551 FMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGN 610
FM+ IP + DA I G+FLN C+++ +A L +AEE+LL++E +N +RYVQLAN YAA+G
Sbjct: 545 FMRKIPIKIDATIWGAFLNACQMSSDAALVKQAEEELLKVEADNGSRYVQLANAYAAKGK 604
Query: 611 WAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELY 669
W EMGRIRK+MRG + + AGCSW+YVE+ IH+FT GD SH K A+YS L G+LY
Sbjct: 605 WDEMGRIRKKMRGHEAKKLAGCSWIYVENGIHVFTSGDRSHSKAEAVYSTLTCLNGKLY 663
>gi|297741429|emb|CBI32560.3| unnamed protein product [Vitis vinifera]
Length = 553
Score = 781 bits (2017), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/553 (67%), Positives = 444/553 (80%), Gaps = 3/553 (0%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
MRS+ K+ H AIK G+T T T+NQLIH+YSKH L E+ KLFDEMPERNVF+WN
Sbjct: 1 MRSI--KDGFRFHAHAIKNGITSTVFTSNQLIHLYSKHGFLAEAHKLFDEMPERNVFTWN 58
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
II A IK+ +LKQAR LFDS+P KDLVTYNSML GYIN +GYE +ALKLFIEMQS ++
Sbjct: 59 AIIWAYIKTQNLKQARELFDSAPSKDLVTYNSMLSGYINTDGYETNALKLFIEMQSLNDE 118
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
R+DEF++T LNL KL +G+QLH++MVKT+N+ SGFAVSSLIDMYSKC C+ E C
Sbjct: 119 TRIDEFSLTRMLNLSAKLSMESYGKQLHSYMVKTANNISGFAVSSLIDMYSKCGCFREVC 178
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+VF+GC ++L+SKNAMVAACCREGE+EM + FWR ELND VSWNTLISGYVQNG
Sbjct: 179 QVFDGCAGVLDLVSKNAMVAACCREGELEMGVNLFWRDLELNDVVSWNTLISGYVQNGCE 238
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
E+ LKLFV M EN VRWNEHT A LSAC GLR++K KE+H WVLK L NPF+SSG+
Sbjct: 239 EDALKLFVHMEENEVRWNEHTIAGLLSACAGLRSLKLGKEVHGWVLKYELGFNPFISSGL 298
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
VDVYCKC NM YAE + G N+FSI+SMIVG+S QGNM EARR FDSLTEK+ ++WT
Sbjct: 299 VDVYCKCGNMKYAELVYATIGTGNAFSITSMIVGHSSQGNMGEARRLFDSLTEKSSIIWT 358
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
ALF+GYVK+Q CEA+F+LLSEF KE +V DALIL+ +LGACA+QAAL+PGK+IHAY+LR
Sbjct: 359 ALFTGYVKSQQCEAVFELLSEFRVKEAMVPDALILISVLGACAIQAALNPGKQIHAYVLR 418
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
+G+++D+KL+S +VDMYSK GN+ YAE IFQ RD V+YN+M A YAHHGHE +AI
Sbjct: 419 IGIELDEKLVSAMVDMYSKSGNIKYAEKIFQRVTNRDAVIYNIMTAGYAHHGHENQAIQQ 478
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
FEEMLE+G++PDAVTFVA+LSA RHCG VE+GEKYF SMT DY I PE DHYACMIDLYG
Sbjct: 479 FEEMLERGVRPDAVTFVALLSACRHCGLVELGEKYFASMT-DYNILPEIDHYACMIDLYG 537
Query: 541 RANQLEKAIEFMK 553
RANQLEKA E K
Sbjct: 538 RANQLEKAQERQK 550
>gi|334185448|ref|NP_001078182.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273297|sp|Q9LHN5.1|PP242_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g18840
gi|9294693|dbj|BAB03093.1| unnamed protein product [Arabidopsis thaliana]
gi|332642633|gb|AEE76154.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 678
Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/670 (54%), Positives = 490/670 (73%), Gaps = 4/670 (0%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
LK+ + H+++IK+G TLT +++NQL+++YSK LLRE+R +FDEM ERNV+SWN +I+A
Sbjct: 4 LKDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAA 63
Query: 66 CIKSHDLKQARSLFDSSP-HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSAD-EHIRM 123
+K +++K+AR LF+S +DL+TYN++L G+ +G E++A+++F EM + + I +
Sbjct: 64 YVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWI 123
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
D+FTVT+ + L KL NV +G QLH +VKT ND + FAVSSLI MYSKC ++E C +F
Sbjct: 124 DDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIF 183
Query: 184 EG-CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
G C E V+ +++NAM+AA CREG+++ AL FWR PELND +SWNTLI+GY QNG EE
Sbjct: 184 NGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEE 243
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
LK+ V M ENG++W+EH+F + L+ L+++K KE+H+ VLKNG SN FVSSGIVD
Sbjct: 244 ALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVD 303
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
VYCKC NM YAES LL G N +S SSMIVGYS QG M EA+R FDSL+EKN+VVWTA+
Sbjct: 304 VYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAM 363
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
F GY+ + +++ +L F+ E D+L++V +LGAC+LQA + PGKEIH + LR G
Sbjct: 364 FLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTG 423
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
+ MDKKL++ VDMYSKCGN+ YAE IF + ERD V+YN MIA AHHGHE K+ FE
Sbjct: 424 ILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFE 483
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRA 542
+M E G KPD +TF+A+LSA RH G V GEKYF SM Y ISPET HY CMIDLYG+A
Sbjct: 484 DMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKA 543
Query: 543 NQLEKAIEFMKSIP-TEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQL 601
+L+KAIE M+ I E+DAVILG+FLN C N+N EL E EEKLL +EG+N +RY+Q+
Sbjct: 544 YRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQI 603
Query: 602 ANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
AN YA+ G W EM RIR QMRG + F+GCSW ++ + H+FT D+SH +T AIY++L
Sbjct: 604 ANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAML 663
Query: 662 AIFTGELYEI 671
T +L EI
Sbjct: 664 HFVTKDLSEI 673
>gi|297830544|ref|XP_002883154.1| hypothetical protein ARALYDRAFT_479395 [Arabidopsis lyrata subsp.
lyrata]
gi|297328994|gb|EFH59413.1| hypothetical protein ARALYDRAFT_479395 [Arabidopsis lyrata subsp.
lyrata]
Length = 614
Score = 724 bits (1870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/610 (57%), Positives = 455/610 (74%), Gaps = 4/610 (0%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
LK+ + H+++IK G TLTTI++NQL+++YSK+ LLRE+R +FDEMPERNV+SWN +I+A
Sbjct: 4 LKDGFLHHIRSIKTGSTLTTISSNQLVNLYSKNGLLREARNVFDEMPERNVYSWNAVIAA 63
Query: 66 CIKSHDLKQARSLFDSSP-HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSAD-EHIRM 123
+K +++K+AR LF +DL+TYN++L G+ +G E++A+K+F EM + + I +
Sbjct: 64 YVKFNNVKEARELFKRDNCERDLITYNTLLSGFAKTDGCESEAIKMFGEMHRKEKDEIWI 123
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
D+F+VT+ + L KL NV +G QLH MVKT NDA+ F+VSSLI MYSKC ++E C VF
Sbjct: 124 DDFSVTTMVKLSAKLTNVFYGEQLHGVMVKTGNDATKFSVSSLIHMYSKCGKFKEVCNVF 183
Query: 184 EG-CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
G C E V+ +++NAM+AA CREG+++ AL FWR PELND +SWNTLISGY QNG EE
Sbjct: 184 NGSCVEFVDSVARNAMIAAYCREGDIDKALSIFWRNPELNDTISWNTLISGYAQNGYEEE 243
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
LK+ V M E+G++W+EHTFA+ L+ L+++K KE+H+ +LKNG SN FVSSGIVD
Sbjct: 244 ALKIAVSMEESGLKWDEHTFAAVLNVLSSLKSLKIGKEVHARLLKNGSYSNKFVSSGIVD 303
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
VYCKC NM YAES LL G N +S SSMIVGYS QG M EA+R FDSL+EKN+VVWTA+
Sbjct: 304 VYCKCGNMKYAESAHLLYGFGNLYSTSSMIVGYSSQGKMGEAKRLFDSLSEKNLVVWTAM 363
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
F GY+ + +++ +L +F+ E V D+L++V +LGAC+LQA + PGKEIH + LR G
Sbjct: 364 FLGYLNLRQPDSVLELARDFIANETNVPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTG 423
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
+ MDKKL++ VDMYSKCGN+ YAE IF ERD V+YN MIA YAHHGHE K+ LFE
Sbjct: 424 ILMDKKLVTAFVDMYSKCGNVEYAERIFDISFERDTVMYNTMIAGYAHHGHEAKSFQLFE 483
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRA 542
+M E G KPD +TF+A+LSA RH G V GEKYF SM Y ISPE HY CMIDLYG+A
Sbjct: 484 DMTEGGFKPDEITFMALLSACRHRGLVLAGEKYFKSMIEAYNISPEAGHYTCMIDLYGKA 543
Query: 543 NQLEKAIEFMKSIP-TEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQL 601
N+L+KAIE M+ I E+DAVILG+FLN C N+N EL E EEKLL +EG+N +RY+QL
Sbjct: 544 NRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLAIEGSNGSRYIQL 603
Query: 602 ANVYAAEGNW 611
AN YA+ G W
Sbjct: 604 ANAYASSGRW 613
>gi|255556101|ref|XP_002519085.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541748|gb|EEF43296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1157
Score = 672 bits (1734), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/492 (64%), Positives = 392/492 (79%)
Query: 20 GLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLF 79
G L T+N+LIH+YSKH L RE+R LFDEMPE+NVFSWN IISA I++H+L QA+++F
Sbjct: 492 GCILPVFTSNKLIHLYSKHGLAREARNLFDEMPEKNVFSWNAIISAHIRTHNLTQAKAIF 551
Query: 80 DSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLL 139
DS+ +DLVTYN ML GY+ +G E+ AL LF EM + +DEF++T+ + L KL
Sbjct: 552 DSASVRDLVTYNLMLSGYVRVDGCESYALDLFKEMPRNRSKVGIDEFSLTTMVKLFAKLS 611
Query: 140 NVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMV 199
+ GRQ+H++MVKT+ND SGFAVSSLIDMYSKC C++ A VF+GC V+L+SKNAMV
Sbjct: 612 MLCHGRQVHSYMVKTANDKSGFAVSSLIDMYSKCGCFKAALEVFKGCERVVDLVSKNAMV 671
Query: 200 AACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNE 259
AACCREGEM++ALK FWR+ ELND VSWNTLISGYVQNG A E K FVRM +NGV WNE
Sbjct: 672 AACCREGEMDLALKLFWRENELNDTVSWNTLISGYVQNGYAVESFKSFVRMMDNGVMWNE 731
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLL 319
HTFAS LSAC GLRN+K KEIH+ VLKNG+ SNP++ SGI+DVYCKC N+ YAES+ L
Sbjct: 732 HTFASLLSACSGLRNLKLGKEIHACVLKNGMDSNPYIESGIIDVYCKCGNVKYAESIYLG 791
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLL 379
+ + FS SSMIVGYSLQGNM EARR FDSL EKN +VWTALF+GYVK Q+CEA+F+L
Sbjct: 792 SRIGSPFSTSSMIVGYSLQGNMAEARRLFDSLEEKNAIVWTALFTGYVKLQHCEAIFELF 851
Query: 380 SEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
SEF +KE +V D+LIL+ +LGACAL+AAL PGK+IH Y+ RMG+ MDKK+ + +VDMYSK
Sbjct: 852 SEFRSKEAMVPDSLILISVLGACALEAALSPGKQIHGYVFRMGITMDKKMSTAMVDMYSK 911
Query: 440 CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
G+ YAE +FQN ERD +LYNVM+A YAH+GHE +AI LF+EMLEKG++P+ VTFVA+
Sbjct: 912 SGSTAYAEKVFQNVNERDSILYNVMMAGYAHNGHEIEAIQLFQEMLEKGVRPNVVTFVAL 971
Query: 500 LSAFRHCGSVEM 511
LSA RHCG V +
Sbjct: 972 LSACRHCGLVGL 983
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 117/270 (43%), Gaps = 37/270 (13%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
NLK H +K G+ + +I +Y K ++ + ++ + FS +++I
Sbjct: 746 NLKLGKEIHACVLKNGMDSNPYIESGIIDVYCKCGNVKYAESIYLGSRIGSPFSTSSMIV 805
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
++ +AR LFDS K+ + + ++ GY+ + EA +LF E +S + + D
Sbjct: 806 GYSLQGNMAEARRLFDSLEEKNAIVWTALFTGYVKLQHCEA-IFELFSEFRSKEAMVP-D 863
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
+ S L C + G+Q+H ++ + ++++DMYSK A +VF+
Sbjct: 864 SLILISVLGACALEAALSPGKQIHGYVFRMGITMDKKMSTAMVDMYSKSGSTAYAEKVFQ 923
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
E D++ +N +++GY NG E +
Sbjct: 924 NVNER---------------------------------DSILYNVMMAGYAHNGHEIEAI 950
Query: 245 KLFVRMGENGVRWNEHTFASALSAC--CGL 272
+LF M E GVR N TF + LSAC CGL
Sbjct: 951 QLFQEMLEKGVRPNVVTFVALLSACRHCGL 980
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 120/261 (45%), Gaps = 35/261 (13%)
Query: 289 GLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHF 348
G I F S+ ++ +Y K A ++ +N FS +++I + N+ +A+ F
Sbjct: 492 GCILPVFTSNKLIHLYSKHGLAREARNLFDEMPEKNVFSWNAIISAHIRTHNLTQAKAIF 551
Query: 349 DSLTEKNVVVWTALFSGYVKAQNCEAL-FDLLSEFV-TKEGVVTDALILVILLGACALQA 406
DS + +++V + + SGYV+ CE+ DL E + V D L ++ A +
Sbjct: 552 DSASVRDLVTYNLMLSGYVRVDGCESYALDLFKEMPRNRSKVGIDEFSLTTMVKLFAKLS 611
Query: 407 ALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQ------NFIER---- 456
L G+++H+Y+++ +S+L+DMYSKCG A +F+ + + +
Sbjct: 612 MLCHGRQVHSYMVKTANDKSGFAVSSLIDMYSKCGCFKAALEVFKGCERVVDLVSKNAMV 671
Query: 457 -----------------------DLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDA 493
D V +N +I+ Y +G+ ++ F M++ G+ +
Sbjct: 672 AACCREGEMDLALKLFWRENELNDTVSWNTLISGYVQNGYAVESFKSFVRMMDNGVMWNE 731
Query: 494 VTFVAILSAFRHCGSVEMGEK 514
TF ++LSA ++++G++
Sbjct: 732 HTFASLLSACSGLRNLKLGKE 752
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 92/202 (45%), Gaps = 36/202 (17%)
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN--- 371
S ++L + F+ + +I YS G EAR FD + EKNV W A+ S +++ N
Sbjct: 487 SFVILGCILPVFTSNKLIHLYSKHGLAREARNLFDEMPEKNVFSWNAIISAHIRTHNLTQ 546
Query: 372 CEALFD------------LLSEFVTKEG------------------VVTDALILVILLGA 401
+A+FD +LS +V +G V D L ++
Sbjct: 547 AKAIFDSASVRDLVTYNLMLSGYVRVDGCESYALDLFKEMPRNRSKVGIDEFSLTTMVKL 606
Query: 402 CALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER--DLV 459
A + L G+++H+Y+++ +S+L+DMYSKCG A +F+ ER DLV
Sbjct: 607 FAKLSMLCHGRQVHSYMVKTANDKSGFAVSSLIDMYSKCGCFKAALEVFKG-CERVVDLV 665
Query: 460 LYNVMIACYAHHGHEEKAILLF 481
N M+A G + A+ LF
Sbjct: 666 SKNAMVAACCREGEMDLALKLF 687
Score = 39.7 bits (91), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 8/144 (5%)
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH-HGHEEKAILLFEEMLEKGIKP 491
++ + + N+T A+ IF + RDLV YN+M++ Y G E A+ LF+EM K
Sbjct: 534 IISAHIRTHNLTQAKAIFDSASVRDLVTYNLMLSGYVRVDGCESYALDLFKEMPRNRSKV 593
Query: 492 --DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC--MIDLYGRANQLEK 547
D + ++ F + G + + M K + + +A +ID+Y + +
Sbjct: 594 GIDEFSLTTMVKLFAKLSMLCHGRQVHSYMV---KTANDKSGFAVSSLIDMYSKCGCFKA 650
Query: 548 AIEFMKSIPTEEDAVILGSFLNVC 571
A+E K D V + + C
Sbjct: 651 ALEVFKGCERVVDLVSKNAMVAAC 674
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 241/664 (36%), Positives = 367/664 (55%), Gaps = 46/664 (6%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H IK+G + N+LI YSK L + R++FD+MP+RN+++WN++++ K L
Sbjct: 43 HASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFL 102
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+A SLF S P +D T+NSM+ G+ + E +AL F M E ++E++ S L
Sbjct: 103 DEADSLFRSMPERDQCTWNSMVSGFAQHDRCE-EALCYFAMMHK--EGFVLNEYSFASVL 159
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C L ++ G Q+H+ + K+ + + S+L+DMYSKC +A RVF+
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFD-------- 211
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
EM + + VSWN+LI+ + QNG A E L +F M E
Sbjct: 212 ----------------EMGDR---------NVVSWNSLITCFEQNGPAVEALDVFQMMLE 246
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFV-SSGIVDVYCKCENMN 311
+ V +E T AS +SAC L +K +E+H V+KN + N + S+ VD+Y KC +
Sbjct: 247 SRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIK 306
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK-AQ 370
A + +RN + +SMI GY++ + + AR F + E+NVV W AL +GY + +
Sbjct: 307 EARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGE 366
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM----- 425
N EAL L + +E V +L ACA A LH G + H ++L+ G +
Sbjct: 367 NEEALS--LFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEE 424
Query: 426 -DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
D + ++L+DMY KCG + ++F+ +ERD V +N MI +A +G+ +A+ LF EM
Sbjct: 425 DDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREM 484
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
LE G KPD +T + +LSA H G VE G YF+SMT D+ ++P DHY CM+DL GRA
Sbjct: 485 LESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGF 544
Query: 545 LEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANV 604
LE+A ++ +P + D+VI GS L C+++RN L EKLL +E +N YV L+N+
Sbjct: 545 LEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNM 604
Query: 605 YAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIF 664
YA G W ++ +RK MR + GCSW+ ++ H+F V D SHP+ I+S+L I
Sbjct: 605 YAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDIL 664
Query: 665 TGEL 668
E+
Sbjct: 665 IAEM 668
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 198/406 (48%), Gaps = 41/406 (10%)
Query: 107 ALKLFIEMQSADEHIRMDEFTVTSTLNLCVK-LLNVGFGRQLHAFMVKTSNDASGFAVSS 165
A K F+++ +AD D L+ C+K L+ + R +HA ++K+ F +
Sbjct: 2 ATKSFLKL-AADLSSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNR 60
Query: 166 LIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAV 225
LID YSKC E+ +VF+ + N+ + N++V + G ++ A F PE D
Sbjct: 61 LIDAYSKCGSLEDGRQVFDKMPQR-NIYTWNSVVTGLTKLGFLDEADSLFRSMPE-RDQC 118
Query: 226 SWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWV 285
+WN+++SG+ Q+ EE L F M + G NE++FAS LSAC GL ++ ++HS +
Sbjct: 119 TWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLI 178
Query: 286 LKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEAR 345
K+ +S+ ++ S +VD+Y KC N+N A+ + G RN S +S+I + G EA
Sbjct: 179 AKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEAL 238
Query: 346 RHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQ 405
F + E V D + L ++ ACA
Sbjct: 239 DVFQMMLESR--------------------------------VEPDEVTLASVISACASL 266
Query: 406 AALHPGKEIHAYILRMG-VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVM 464
+A+ G+E+H +++ ++ D L + VDMY+KC + A IF + R+++ M
Sbjct: 267 SAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSM 326
Query: 465 IACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVE 510
I+ YA + A L+F +M E+ + V++ A+++ + G E
Sbjct: 327 ISGYAMAASTKAARLMFTKMAERNV----VSWNALIAGYTQNGENE 368
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 158/300 (52%), Gaps = 2/300 (0%)
Query: 258 NEHTFASALSACCGLR-NVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESM 316
+ FA L +C + + + +H+ V+K+G + F+ + ++D Y KC ++ +
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77
Query: 317 LLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALF 376
RN ++ +S++ G + G ++EA F S+ E++ W ++ SG+ + CE
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 377 DLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDM 436
+ + KEG V + +L AC+ ++ G ++H+ I + D + S LVDM
Sbjct: 138 CYFA-MMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDM 196
Query: 437 YSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTF 496
YSKCGN+ A+ +F +R++V +N +I C+ +G +A+ +F+ MLE ++PD VT
Sbjct: 197 YSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTL 256
Query: 497 VAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIP 556
+++SA ++++G++ + + K+ + +D+Y + +++++A S+P
Sbjct: 257 ASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP 316
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 241/666 (36%), Positives = 366/666 (54%), Gaps = 46/666 (6%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H IK+G + N+LI Y+K L + R+LFD+MP+RNVF+WN++++ K L
Sbjct: 43 HASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGFL 102
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+A SLF S P +D T+NSM+ G+ + E +AL F M E ++E+T S L
Sbjct: 103 DEADSLFRSMPERDQCTWNSMVSGFAQHDRCE-EALYYFAMMHK--EGFVLNEYTFASGL 159
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C L ++ G Q+H+ + K+ + + S+L+DMYSKC +A +VF+
Sbjct: 160 SACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFD-------- 211
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
EM + + VSWN+LI+ Y QNG A E LK+F M E
Sbjct: 212 ----------------EMGDR---------NVVSWNSLITCYEQNGPAVEALKVFQVMLE 246
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFV-SSGIVDVYCKCENMN 311
+ V +E T AS +SAC L +K +E+H+ V+K + N + S+ VD+Y KC +
Sbjct: 247 SWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIK 306
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK-AQ 370
A + +RN + +SM+ GY++ + + AR F + E+NVV W AL +GY + +
Sbjct: 307 EARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGE 366
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM----- 425
N EAL L + +E V +L ACA A LH G + H ++L+ G +
Sbjct: 367 NEEALS--LFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEE 424
Query: 426 -DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
D + ++L+DMY KCG + ++F+ +ERD V +N MI +A +G+ +A+ LF EM
Sbjct: 425 DDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREM 484
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
L+ G KPD +T + +LSA H G VE G YF+SMT D+ ++P DHY CM+DL GRA
Sbjct: 485 LDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGF 544
Query: 545 LEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANV 604
LE+A ++ +P + D+VI GS L C+++RN L EKL +E +N YV L+N+
Sbjct: 545 LEEAKSIIEEMPVQPDSVIWGSLLAACKVHRNITLGKYVAEKLFEVETSNSGPYVLLSNM 604
Query: 605 YAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIF 664
YA G W + +RK MR + GCSW+ + H+F V D SHP+ I+S+L I
Sbjct: 605 YAELGKWGDAMNVRKLMRKEGVTKQPGCSWIKIPGHAHVFMVKDKSHPRKKQIHSLLDIL 664
Query: 665 TGELYE 670
E+ +
Sbjct: 665 IAEMRQ 670
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/410 (29%), Positives = 205/410 (50%), Gaps = 49/410 (11%)
Query: 107 ALKLFIEMQSADEHIRMDEFTVTST----LNLCVKL-LNVGFGRQLHAFMVKTSNDASGF 161
A K+F+++ + FTV+S L+ C+KL L+ R +HA ++K+ F
Sbjct: 2 ARKIFLKLAG-----DLSSFTVSSPFAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVF 56
Query: 162 AVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPEL 221
+ LID Y+KC E+ ++F+ + N+ + N++V + G ++ A F PE
Sbjct: 57 IQNRLIDAYAKCGSLEDGRQLFDKMPQR-NVFTWNSVVTGLTKLGFLDEADSLFRSMPE- 114
Query: 222 NDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEI 281
D +WN+++SG+ Q+ EE L F M + G NE+TFAS LSAC GL ++ +I
Sbjct: 115 RDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQI 174
Query: 282 HSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNM 341
HS + K+ +S+ ++ S +VD+Y KC N+N A+ + G RN S +S+I Y G
Sbjct: 175 HSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPA 234
Query: 342 EEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGA 401
EA + F + E W V D + L ++ A
Sbjct: 235 VEALKVFQVMLES----W----------------------------VEPDEVTLASVISA 262
Query: 402 CALQAALHPGKEIHAYILRMG-VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL 460
CA +A+ G+E+HA +++M ++ D L + VDMY+KC + A IF + R+++
Sbjct: 263 CASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIA 322
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVE 510
M++ YA + A L+F +M E+ + V++ A+++ + G E
Sbjct: 323 ETSMVSGYAMAASTKAARLMFTKMAERNV----VSWNALIAGYTQNGENE 368
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 158/300 (52%), Gaps = 8/300 (2%)
Query: 261 TFASALSACCGLR----NVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESM 316
FA L +C L+ +V+C +H+ V+K+G + F+ + ++D Y KC ++ +
Sbjct: 21 PFAKLLDSCIKLKLSAIDVRC---VHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQL 77
Query: 317 LLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALF 376
RN F+ +S++ G + G ++EA F S+ E++ W ++ SG+ + CE
Sbjct: 78 FDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 377 DLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDM 436
+ + KEG V + L AC+ ++ G +IH+ I + D + S LVDM
Sbjct: 138 YYFA-MMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDM 196
Query: 437 YSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTF 496
YSKCGN+ A+ +F +R++V +N +I CY +G +A+ +F+ MLE ++PD VT
Sbjct: 197 YSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTL 256
Query: 497 VAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIP 556
+++SA ++++G++ + K+ + +D+Y + +++++A S+P
Sbjct: 257 ASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP 316
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 240/680 (35%), Positives = 372/680 (54%), Gaps = 47/680 (6%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
+RS + + + H + + ++ N+LI +Y K + L ++RKLFD MP+RN F+WN
Sbjct: 26 LRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMPQRNTFTWN 85
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
++IS KS L +A LF S P D ++NSM+ G+ + +E ++L+ F++M D
Sbjct: 86 SLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFE-ESLEYFVKMHRED-- 142
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
++E++ S L+ C L+++ G Q+HA + K+ + S+LIDMYSKC A
Sbjct: 143 FLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAE 202
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
VF G E NL++ WN+LI+ Y QNG A
Sbjct: 203 EVFSGMIER-NLVT--------------------------------WNSLITCYEQNGPA 229
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFV-SSG 299
E L++FVRM ++G+ +E T AS +SAC L +K +IH+ V+K + V +
Sbjct: 230 SEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNA 289
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
+VD+Y KC +N A + +RN S +SM+ GY+ +++ AR F +T++NVV W
Sbjct: 290 LVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSW 349
Query: 360 TALFSGYVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
AL +GY + +N EAL L + +E + LL ACA A L G++ H ++
Sbjct: 350 NALIAGYTQNGENEEAL--RLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHV 407
Query: 419 LRMGVQM------DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
L+ G + D + ++L+DMY KCG++ +F+ ERD V +N +I YA +G
Sbjct: 408 LKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNG 467
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
+ +A+ +F +ML G KPD VT + +L A H G VE G YF SM ++ + P DHY
Sbjct: 468 YGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSME-EHGLIPLKDHY 526
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
CM+DL GRA L +A ++++P DAV+ GS L C+++ N E+ A EKLL ++
Sbjct: 527 TCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDP 586
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
N YV L+N+YA G W ++ R+RK MR + GCSW+ VE +H+F V D SHP
Sbjct: 587 WNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVESRVHVFLVKDKSHP 646
Query: 653 KTNAIYSVLAIFTGELYEIA 672
IYSVL + T ++ +
Sbjct: 647 HRKQIYSVLKMLTEQMKRVG 666
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 121/477 (25%), Positives = 221/477 (46%), Gaps = 79/477 (16%)
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L+ C++ + R +HA ++ T F + LID+Y KC C ++A ++F+ + N
Sbjct: 22 LDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMPQR-N 80
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
+ N++++ + G ++ A + F PE D SWN+++SG+ Q+ EE L+ FV+M
Sbjct: 81 TFTWNSLISVLTKSGFLDEAARLFGSMPE-PDQCSWNSMVSGFAQHDRFEESLEYFVKMH 139
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
NE++F SALSAC GL ++ ++H+ V K+ ++ ++ S ++D+Y KC ++
Sbjct: 140 REDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVA 199
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
AE + F + E+N+V W +L + Y QN
Sbjct: 200 CAEEV-------------------------------FSGMIERNLVTWNSLITCY--EQN 226
Query: 372 CEALFDLLSEFV--TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG-VQMDKK 428
A + L FV G+ D + L ++ ACA AL G +IHA +++ + D
Sbjct: 227 GPA-SEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLV 285
Query: 429 LISTLVDMYSKC-------------------------------GNMTYAEIIFQNFIERD 457
L + LVDMY+KC ++ A +F +R+
Sbjct: 286 LGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRN 345
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFN 517
+V +N +IA Y +G E+A+ LF + + I P TF +LSA + + +G +
Sbjct: 346 VVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHT 405
Query: 518 SMTA---DYKISPETDHYA--CMIDLYGRANQLEKAIEFMKSIPTEE----DAVILG 565
+ +++ E+D + +ID+Y + +E + + + +A+I+G
Sbjct: 406 HVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVG 462
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 151/293 (51%), Gaps = 5/293 (1%)
Query: 258 NEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESML 317
N FA L +C R+ + + +H+ +L F+ + ++DVY KC+ ++ A +
Sbjct: 14 NSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLF 73
Query: 318 LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFD 377
RN+F+ +S+I + G ++EA R F S+ E + W ++ SG+ + E +
Sbjct: 74 DRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFE---E 130
Query: 378 LLSEFVT--KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVD 435
L FV +E + + L ACA L+ G ++HA + + D + S L+D
Sbjct: 131 SLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALID 190
Query: 436 MYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVT 495
MYSKCG++ AE +F IER+LV +N +I CY +G +A+ +F M++ G++PD VT
Sbjct: 191 MYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVT 250
Query: 496 FVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
+++SA +++ G + + K + ++D+Y + +++ +A
Sbjct: 251 LASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEA 303
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 233/680 (34%), Positives = 371/680 (54%), Gaps = 46/680 (6%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
++S ++ EA + H + IK + N+L+ +Y K L ++RK+FD M +RN FSWN
Sbjct: 30 VKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQQRNTFSWN 89
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
++ A K L +A +LF P +D ++N+M+ G+ + +E +AL+ ++M S D
Sbjct: 90 AVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFE-EALRFVVDMHSED-- 146
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
++E++ S L+ C L+++ G Q+H + K+ + S+L+DMYSKCR A
Sbjct: 147 FVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQ 206
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
R F+ ++ + VSWN+LI+ Y QNG A
Sbjct: 207 RAFDDM---------------------------------DVRNIVSWNSLITCYEQNGPA 233
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFV-SSG 299
+ L++FVRM G+ +E T AS SAC L ++ +IH+ V+K+ N V +
Sbjct: 234 GKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNA 293
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
+VD+Y KC +N A + +R+ S +SM+ GY+ +++ AR F ++ E+NVV W
Sbjct: 294 LVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSW 353
Query: 360 TALFSGYVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
AL +GY + +N EA+ L + +E + LL ACA A L G++ H +I
Sbjct: 354 NALIAGYTQNGENEEAVRLFL--LLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHI 411
Query: 419 LRMGV------QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
L+ G D + ++L+DMY KCG + ++F+ +ERD V +N MI YA +G
Sbjct: 412 LKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNG 471
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
+ +A+ +F EML G +PD VT + +LSA H G VE G YF SMT ++ + P DHY
Sbjct: 472 YGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHY 531
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
CM+DL GRA L++A ++++P E DAV+ GS L C+++ N L E+LL ++
Sbjct: 532 TCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVAERLLEIDP 591
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
N YV L+N+YA G W ++ R+RKQMR M + GCSW+ ++ +H+F V D HP
Sbjct: 592 LNSGPYVLLSNMYAELGRWKDVVRVRKQMRQMGVIKQPGCSWISIQSHLHVFMVKDKRHP 651
Query: 653 KTNAIYSVLAIFTGELYEIA 672
IY +L I T ++ +
Sbjct: 652 HKKDIYLILKILTEQMKRVG 671
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 126/461 (27%), Positives = 210/461 (45%), Gaps = 71/461 (15%)
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
+D L+ CVK +V R +HA ++KT + F + L+D+Y KC E+A +V
Sbjct: 17 LDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKV 76
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
F+ ++ N S NA++ A + G ++ AL F PE D SWN ++SG+ Q EE
Sbjct: 77 FDH-MQQRNTFSWNAVLGALTKFGALDEALNLFKCMPE-RDQCSWNAMVSGFAQRDRFEE 134
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
L+ V M NE++F SALSAC GL ++ +IH + K+ + ++ S +VD
Sbjct: 135 ALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVD 194
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
+Y KC + A+ VRN S +S+I Y G +A F
Sbjct: 195 MYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVF-------------- 240
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
V+ NC G+ D + L + ACA +A+ G +IHA +++
Sbjct: 241 ----VRMMNC--------------GIEPDEITLASVASACASLSAIREGLQIHARVMKHD 282
Query: 423 -VQMDKKLISTLVDMYSKC-------------------------------GNMTYAEIIF 450
+ D L + LVDMY+KC ++ A ++F
Sbjct: 283 KYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMF 342
Query: 451 QNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVE 510
N +ER++V +N +IA Y +G E+A+ LF + + I P TF +L+A + ++
Sbjct: 343 SNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLK 402
Query: 511 MGEKYFNSMTAD---YKISPETDHYA--CMIDLYGRANQLE 546
+G + + +K ++D + +ID+Y + +E
Sbjct: 403 LGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVE 443
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 145/307 (47%), Gaps = 11/307 (3%)
Query: 258 NEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESML 317
+ FA L C ++V A+ +H+ ++K S F+ + +VDVY KC + A +
Sbjct: 18 DSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVF 77
Query: 318 LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEA--- 374
RN+FS ++++ + G ++EA F + E++ W A+ SG+ + E
Sbjct: 78 DHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALR 137
Query: 375 -LFDLLSE-FVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
+ D+ SE FV E A L ACA L G +IH I + +D + S
Sbjct: 138 FVVDMHSEDFVLNEYSFGSA------LSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSA 191
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
LVDMYSKC + A+ F + R++V +N +I CY +G KA+ +F M+ GI+PD
Sbjct: 192 LVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPD 251
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
+T ++ SA ++ G + + K + ++D+Y + ++ +A
Sbjct: 252 EITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVF 311
Query: 553 KSIPTEE 559
+P +
Sbjct: 312 DRMPLRD 318
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 230/660 (34%), Positives = 372/660 (56%), Gaps = 16/660 (2%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKH----NLLRESRKLFDEMP--ERNVFSWNTIISAC 66
H +A+KAGL + N L+ Y + LR++R+LFDE+P RNVF+WN+++S
Sbjct: 49 HARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIPLARRNVFTWNSLLSMF 108
Query: 67 IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEF 126
KS L AR +F P +D V++ M+ G +N G +A+K ++M + + +F
Sbjct: 109 AKSGRLADARGVFAEMPERDAVSWTVMVVG-LNRAGRFGEAIKTLLDMTA--DGFTPTQF 165
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
T+T+ L+ C GR++H+F+VK + +S+++MY KC E A VFE
Sbjct: 166 TLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERM 225
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
++ S NAMV+ G M++A F P+ VSWN +I+GY QNG + LKL
Sbjct: 226 PVR-SVSSWNAMVSLNTHLGRMDLAESLFESMPD-RSIVSWNAMIAGYNQNGLDAKALKL 283
Query: 247 FVRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
F RM E+ + +E T S LSAC L NV+ K++H+++L+ + N V++ ++ Y
Sbjct: 284 FSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYA 343
Query: 306 KCENMNYAESML--LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
K ++ A ++ ++ N S ++++ GY G+ME AR F + ++VV WTA+
Sbjct: 344 KSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMI 403
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
GY + + DL +T G ++ L +L CA A L GK+IH +R +
Sbjct: 404 VGYEQNGRNDEAIDLFRSMITC-GPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLL 462
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER-DLVLYNVMIACYAHHGHEEKAILLFE 482
+ + + ++ MY++ G+ +A +F R + + + MI A HG E+A+ LFE
Sbjct: 463 EQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFE 522
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRA 542
EML G++PD +T+V +LSA H G V G++Y++ + +++I+PE HYACM+DL RA
Sbjct: 523 EMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARA 582
Query: 543 NQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLA 602
+A EF++ +P E DA+ GS L+ CR+++NAELA A EKLL ++ NN Y +A
Sbjct: 583 GLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIA 642
Query: 603 NVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLA 662
NVY+A G W++ RI K + + G SW ++ +IH+F DV HP+ +A+Y++ A
Sbjct: 643 NVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAA 702
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 196/421 (46%), Gaps = 39/421 (9%)
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR----CYEEACRVFEGCT 187
L LC N G GR +HA VK AS + ++L+ Y + +A R+F+
Sbjct: 33 LQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIP 92
Query: 188 -EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
N+ + N++++ + G + A F PE DAVSW ++ G + G E +K
Sbjct: 93 LARRNVFTWNSLLSMFAKSGRLADARGVFAEMPE-RDAVSWTVMVVGLNRAGRFGEAIKT 151
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
+ M +G + T + LS+C + +++HS+V+K GL S V++ ++++Y K
Sbjct: 152 LLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGK 211
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
C + A ++ VR+ S ++M+ + G M+ A F+S+ ++++V W A+ +GY
Sbjct: 212 CGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGY 271
Query: 367 VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV--- 423
+ L S + + + D + +L ACA + GK++HAYILR +
Sbjct: 272 NQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYN 331
Query: 424 -QMDKKLIST-----------------------------LVDMYSKCGNMTYAEIIFQNF 453
Q+ LIST L++ Y K G+M A +F
Sbjct: 332 SQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVM 391
Query: 454 IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
RD+V + MI Y +G ++AI LF M+ G +P++ T A+LS ++ G+
Sbjct: 392 NNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGK 451
Query: 514 K 514
+
Sbjct: 452 Q 452
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 164/347 (47%), Gaps = 43/347 (12%)
Query: 262 FASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE----NMNYAESML 317
+A L C N + IH+ +K GL+++ ++ + ++ Y + + A +
Sbjct: 29 YARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLF 88
Query: 318 --LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN-CEA 374
+ RN F+ +S++ ++ G + +AR F + E++ V WT + G +A EA
Sbjct: 89 DEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEA 148
Query: 375 LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLV 434
+ LL +T +G L +L +CA+ A G+++H++++++G+ + ++++
Sbjct: 149 IKTLLD--MTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVL 206
Query: 435 DMYSKCGN-------------------------------MTYAEIIFQNFIERDLVLYNV 463
+MY KCG+ M AE +F++ +R +V +N
Sbjct: 207 NMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNA 266
Query: 464 MIACYAHHGHEEKAILLFEEML-EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTAD 522
MIA Y +G + KA+ LF ML E + PD T ++LSA + G+V +G K ++
Sbjct: 267 MIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIG-KQVHAYILR 325
Query: 523 YKISPETDHYACMIDLYGRANQLEKAIEFM-KSIPTEEDAVILGSFL 568
+++ + +I Y ++ +E A M +S+ T+ + + + L
Sbjct: 326 TEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALL 372
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 230/660 (34%), Positives = 371/660 (56%), Gaps = 16/660 (2%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKH----NLLRESRKLFDEMP--ERNVFSWNTIISAC 66
H +A+KAGL + N L+ Y + LR++R+LFDE+P RNVF+WN+++S
Sbjct: 49 HARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIPLARRNVFTWNSLLSMF 108
Query: 67 IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEF 126
KS L AR +F P +D V++ M+ G +N G +A+K ++M + + +F
Sbjct: 109 AKSGRLADARGVFAEMPERDAVSWTVMVVG-LNRAGRFGEAIKTLLDMTA--DGFTPTQF 165
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
T+T+ L+ C GR++H+F+VK + +S+++MY KC E A VFE
Sbjct: 166 TLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVFERM 225
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
++ S NAMV+ G M++A F P VSWN +I+GY QNG + LKL
Sbjct: 226 PVR-SVSSWNAMVSLNTHLGRMDLAESLFESMPG-RSIVSWNAMIAGYNQNGLDAKALKL 283
Query: 247 FVRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
F RM E+ + +E T S LSAC L NV+ K++H+++L+ + N V++ ++ Y
Sbjct: 284 FSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYA 343
Query: 306 KCENMNYAESML--LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
K ++ A ++ ++ N S ++++ GY G+ME AR F + ++VV WTA+
Sbjct: 344 KSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMI 403
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
GY + + DL +T G ++ L +L CA A L GK+IH +R +
Sbjct: 404 VGYEQNGRNDEAIDLFRSMITC-GPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLL 462
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER-DLVLYNVMIACYAHHGHEEKAILLFE 482
+ + + ++ MY++ G+ +A +F R + + + MI A HG E+A+ LFE
Sbjct: 463 ERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFE 522
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRA 542
EML G++PD +T+V +LSA H G V G++Y++ + +++I+PE HYACM+DL RA
Sbjct: 523 EMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARA 582
Query: 543 NQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLA 602
+A EF++ +P E DA+ GS L+ CR+++NAELA A EKLL ++ NN Y +A
Sbjct: 583 GLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIA 642
Query: 603 NVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLA 662
NVY+A G W++ RI K + + G SW ++ +IH+F DV HP+ +A+Y++ A
Sbjct: 643 NVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAA 702
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 195/421 (46%), Gaps = 39/421 (9%)
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR----CYEEACRVFEGCT 187
L LC N G GR +HA VK AS + ++L+ Y + +A R+F+
Sbjct: 33 LQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIP 92
Query: 188 -EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
N+ + N++++ + G + A F PE DAVSW ++ G + G E +K
Sbjct: 93 LARRNVFTWNSLLSMFAKSGRLADARGVFAEMPE-RDAVSWTVMVVGLNRAGRFGEAIKT 151
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
+ M +G + T + LS+C + +++HS+V+K GL S V++ ++++Y K
Sbjct: 152 LLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGK 211
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
C + A ++ VR+ S ++M+ + G M+ A F+S+ +++V W A+ +GY
Sbjct: 212 CGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGY 271
Query: 367 VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV--- 423
+ L S + + + D + +L ACA + GK++HAYILR +
Sbjct: 272 NQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYN 331
Query: 424 -QMDKKLIST-----------------------------LVDMYSKCGNMTYAEIIFQNF 453
Q+ LIST L++ Y K G+M A +F
Sbjct: 332 SQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVM 391
Query: 454 IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
RD+V + MI Y +G ++AI LF M+ G +P++ T A+LS ++ G+
Sbjct: 392 NNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGK 451
Query: 514 K 514
+
Sbjct: 452 Q 452
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 163/347 (46%), Gaps = 43/347 (12%)
Query: 262 FASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE----NMNYAESML 317
+A L C N + IH+ +K GL+++ ++ + ++ Y + + A +
Sbjct: 29 YARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLF 88
Query: 318 --LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN-CEA 374
+ RN F+ +S++ ++ G + +AR F + E++ V WT + G +A EA
Sbjct: 89 DEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEA 148
Query: 375 LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLV 434
+ LL +T +G L +L +CA+ A G+++H++++++G+ + ++++
Sbjct: 149 IKTLLD--MTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVL 206
Query: 435 DMYSKCGN-------------------------------MTYAEIIFQNFIERDLVLYNV 463
+MY KCG+ M AE +F++ R +V +N
Sbjct: 207 NMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNA 266
Query: 464 MIACYAHHGHEEKAILLFEEML-EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTAD 522
MIA Y +G + KA+ LF ML E + PD T ++LSA + G+V +G K ++
Sbjct: 267 MIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIG-KQVHAYILR 325
Query: 523 YKISPETDHYACMIDLYGRANQLEKAIEFM-KSIPTEEDAVILGSFL 568
+++ + +I Y ++ +E A M +S+ T+ + + + L
Sbjct: 326 TEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALL 372
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 243/679 (35%), Positives = 384/679 (56%), Gaps = 15/679 (2%)
Query: 2 RSLNLKEALI---CHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFS 58
RSL K+ H + IKAGL L N L++ Y+K + ++ ++FDEMP ++VFS
Sbjct: 22 RSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFS 81
Query: 59 WNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSAD 118
WN I+S K L++A +F+ P D V++ +M+ GY N G +A+ +F EM S D
Sbjct: 82 WNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGY-NQMGQFENAIGMFREMVSDD 140
Query: 119 EHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEE 178
+ +FT+T+ L C + +G GR++H+F+VK + +SL++MY+K
Sbjct: 141 --VPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVT 198
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
A VF+ + + S N M+++ + G +++A F + E D VSWN +ISGY Q+G
Sbjct: 199 AKIVFDRMKLK-STSSWNTMISSHMQSGLVDLAQVQFEQMIE-RDVVSWNAMISGYNQHG 256
Query: 239 DAEEGLKLFVRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVS 297
E L +F +M ++ + ++ T ASALSAC L N+K K+IH+ +++ + V
Sbjct: 257 FDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVG 316
Query: 298 SGIVDVYCKCENMNYAESMLLLKGVRN--SFSISSMIVGYSLQGNMEEARRHFDSLTEKN 355
+ ++ +Y K + A+ ++ + N + ++++ GY G++ ARR FDSL ++
Sbjct: 317 NALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRD 376
Query: 356 VVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIH 415
VV WTA+ GYV+ + +L + KEG + L +L + A+L G++IH
Sbjct: 377 VVAWTAMIVGYVQNGFNQDAMELFRSMI-KEGPKPNNYTLATMLSVSSSLASLDHGRQIH 435
Query: 416 AYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFI--ERDLVLYNVMIACYAHHGH 473
A R G + + L+ MY+K G++ A +F N I +RD + + MI A HG
Sbjct: 436 ASATRSGNASSVSVSNALITMYAKSGSINDARWVF-NLIHWKRDTITWTSMIIALAQHGL 494
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA 533
E+A+ LFE MLE GIKPD +T+V +LSA H G VE G Y+N M +KI P HYA
Sbjct: 495 GEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYA 554
Query: 534 CMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGN 593
CMIDL+GRA L++A F++++P E D + GS L C++++N ELA A E+LL +E
Sbjct: 555 CMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPE 614
Query: 594 NKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPK 653
N Y LANVY+A G W IRK M+ + G SWV +++++HIF V D HP+
Sbjct: 615 NSGAYSALANVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDDGLHPQ 674
Query: 654 TNAIYSVLAIFTGELYEIA 672
+AIY ++A E+ ++
Sbjct: 675 RDAIYEMMAKIWKEIKKMG 693
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 122/473 (25%), Positives = 224/473 (47%), Gaps = 36/473 (7%)
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE 188
TS L +K + G+ +HA ++K F +++L++ Y+K +A RVF+
Sbjct: 17 TSFLQRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPV 76
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
+ ++ S N +++ + G +E A + F PE D+VSW +I GY Q G E + +F
Sbjct: 77 K-SVFSWNIILSGYAKGGRLEEAHRVFEEMPE-PDSVSWTAMIVGYNQMGQFENAIGMFR 134
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
M + V + T + L++C + + +++HS+V+K+GL S V++ ++++Y K
Sbjct: 135 EMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSG 194
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
+ A+ + ++++ S ++MI + G ++ A+ F+ + E++VV W A+ SGY +
Sbjct: 195 DPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQ 254
Query: 369 AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM------- 421
D+ S+ + D L L ACA L GK+IHA+I+R
Sbjct: 255 HGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGA 314
Query: 422 -------------GVQMDKKLI-------------STLVDMYSKCGNMTYAEIIFQNFIE 455
GV++ +K+I + L+D Y K G++ A IF +
Sbjct: 315 VGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRV 374
Query: 456 RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKY 515
RD+V + MI Y +G + A+ LF M+++G KP+ T +LS S++ G +
Sbjct: 375 RDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQI 434
Query: 516 FNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFL 568
S T S + A +I +Y ++ + A I + D + S +
Sbjct: 435 HASATRSGNASSVSVSNA-LITMYAKSGSINDARWVFNLIHWKRDTITWTSMI 486
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 164/345 (47%), Gaps = 43/345 (12%)
Query: 262 FASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKG 321
+ S L ++ K IH+ ++K GL F+ + +++ Y K + A +
Sbjct: 16 YTSFLQRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMP 75
Query: 322 VRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSE 381
V++ FS + ++ GY+ G +EEA R F+ + E + V WTA+ GY + E + E
Sbjct: 76 VKSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFRE 135
Query: 382 FVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
V+ + V L +L +CA L G+++H+++++ G+ + ++L++MY+K G
Sbjct: 136 MVSDD-VPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSG 194
Query: 442 NMTYAEII-------------------------------FQNFIERDLVLYNVMIACYAH 470
+ A+I+ F+ IERD+V +N MI+ Y
Sbjct: 195 DPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQ 254
Query: 471 HGHEEKAILLFEEML-EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPET 529
HG + +A+ +F +ML + KPD T + LSA + ++++G++ + I E
Sbjct: 255 HGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHI-----IRTEF 309
Query: 530 DHYA----CMIDLYGRANQLEKAIEFM-KSIPTEEDAVILGSFLN 569
D + +I +Y ++ +E A + + +S+ + D + + L+
Sbjct: 310 DTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLD 354
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 233/656 (35%), Positives = 374/656 (57%), Gaps = 14/656 (2%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H Q IK GL L N L+ Y+K LR + +FDEMP ++ FSWNT+IS K +
Sbjct: 33 HCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAKQGNF 92
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+ +R L P D V++ +++ GY N G +A+ +F +M S E + +FTV++ L
Sbjct: 93 EVSRRLLYEMPDCDPVSWTAIIVGY-NQFGLFDNAIWMFAKMIS--ERVPPSQFTVSNVL 149
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C + GR++H+F+VK + +SL++MY+KC A VF+ T + N+
Sbjct: 150 SSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVK-NI 208
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM-G 251
+ NA+++ + G+ E+A F + P+ D VSWN++ISGY Q G E L +F +M
Sbjct: 209 STWNALISLYMQSGQFELAASQFEKMPD-RDIVSWNSMISGYSQQGYNLEALAIFSKMLN 267
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
E ++ + T AS LSAC L + K+IH+++L+ ++ V + ++ +Y K +
Sbjct: 268 EPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVE 327
Query: 312 YAESMLLLKGVRNS----FSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
A L+++ R S + +S++ GY+ GN++ AR F+ L +++VV WTA+ GYV
Sbjct: 328 IAR--LIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYV 385
Query: 368 KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDK 427
+ +L + EG ++ L +L + L GK+IHA ++ G
Sbjct: 386 QNGLWNDALELF-RLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTP 444
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQ-NFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
+ + L+ MY+K GN+ A+ +F ++++V + MI A HG ++AI LFE ML
Sbjct: 445 SVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLS 504
Query: 487 KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLE 546
G+KPD +T+V +LSA H G VE G KY+N MT ++I P HYACMIDLYGRA L+
Sbjct: 505 VGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQ 564
Query: 547 KAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYA 606
+A F++S+P E D + GS L C++++NA+LA A E+LL ++ N Y+ LANVY+
Sbjct: 565 EAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYS 624
Query: 607 AEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLA 662
A G W + RK M+ + G SW+++++E+H F V DV HP+ + IY ++A
Sbjct: 625 ACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMA 680
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 115/452 (25%), Positives = 221/452 (48%), Gaps = 40/452 (8%)
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L V++ + GR +H ++K + +++L+ Y+K A VF+ + +
Sbjct: 17 LQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLK-S 75
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
S N +++ ++G E++ + + P+ D VSW +I GY Q G + + +F +M
Sbjct: 76 TFSWNTLISGYAKQGNFEVSRRLLYEMPDC-DPVSWTAIIVGYNQFGLFDNAIWMFAKMI 134
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
V ++ T ++ LS+C + + ++IHS+V+K GL S V++ ++++Y KC +
Sbjct: 135 SERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPV 194
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV-KAQ 370
A+ + V+N + +++I Y G E A F+ + ++++V W ++ SGY +
Sbjct: 195 IAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGY 254
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM--------- 421
N EAL + S+ + + + D L +L ACA L+ GK+IHAYILR
Sbjct: 255 NLEAL-AIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVG 313
Query: 422 -----------GVQMDKKLI-------------STLVDMYSKCGNMTYAEIIFQNFIERD 457
GV++ + ++ ++L+D Y+K GN+ A IF +RD
Sbjct: 314 NALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRD 373
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK-YF 516
+V + MI Y +G A+ LF M+ +G +P++ T A+LS +E G++ +
Sbjct: 374 VVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHA 433
Query: 517 NSMTADYKISPETDHYACMIDLYGRANQLEKA 548
+++ A +P + +I +Y + + A
Sbjct: 434 SAIKAGESSTPSVTN--ALIAMYAKTGNINVA 463
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 159/327 (48%), Gaps = 50/327 (15%)
Query: 262 FASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKG 321
FA L +++ + +H ++K GL ++ + ++ Y K ++ +A +
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 322 VRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFD---- 377
++++FS +++I GY+ QGN E +RR + + + V WTA+ GY N LFD
Sbjct: 73 LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGY----NQFGLFDNAIW 128
Query: 378 LLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMY 437
+ ++ ++ E V + +L +CA L G++IH++++++G+ + ++L++MY
Sbjct: 129 MFAKMIS-ERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMY 187
Query: 438 SKCGNMTYAEII-------------------------------FQNFIERDLVLYNVMIA 466
+KCG+ A+++ F+ +RD+V +N MI+
Sbjct: 188 AKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMIS 247
Query: 467 CYAHHGHEEKAILLFEEML-EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKI 525
Y+ G+ +A+ +F +ML E +KPD T +ILSA + + +G++ Y +
Sbjct: 248 GYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIH-----AYIL 302
Query: 526 SPETDHYA----CMIDLYGRANQLEKA 548
ET+ +I +Y ++ +E A
Sbjct: 303 RAETETSGAVGNALISMYAKSGGVEIA 329
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 236/678 (34%), Positives = 370/678 (54%), Gaps = 50/678 (7%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
+RS + +A H + IK + N+L+ Y K ++RK+FD MP+RN FS+N
Sbjct: 30 VRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMPQRNTFSYN 89
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
++S K L +A ++F S P D ++N+M+ G+ + +E +AL+ F++M S D
Sbjct: 90 AVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFE-EALRFFVDMHSED-- 146
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
++E++ S L+ C L ++ G Q+HA + K+ + S+L+DMYSKC A
Sbjct: 147 FVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQ 206
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
R F+G MA++ VSWN+LI+ Y QNG A
Sbjct: 207 RAFDG------------------------MAVRNI---------VSWNSLITCYEQNGPA 233
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFV-SSG 299
+ L++FV M +NGV +E T AS +SAC ++ +IH+ V+K N V +
Sbjct: 234 GKALEVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNA 293
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
+VD+Y KC +N A + +RN S +SM+ GY+ +++ AR F ++ EKNVV W
Sbjct: 294 LVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSW 353
Query: 360 TALFSGYVK-AQNCEA--LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHA 416
AL +GY + +N EA LF LL +E + LL ACA A L G++ H
Sbjct: 354 NALIAGYTQNGENEEAVRLFLLLK----RESIWPTHYTFGNLLNACANLADLKLGRQAHT 409
Query: 417 YILRMGV------QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
IL+ G + D + ++L+DMY KCG + ++F+ +ERD+V +N MI YA
Sbjct: 410 QILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQ 469
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD 530
+G+ A+ +F +ML G KPD VT + +LSA H G VE G +YF+SM + ++P D
Sbjct: 470 NGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKD 529
Query: 531 HYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRL 590
H+ CM+DL GRA L++A + ++++P + D V+ GS L C+++ N EL EKL+ +
Sbjct: 530 HFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVVWGSLLAACKVHGNIELGKYVAEKLMEI 589
Query: 591 EGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVS 650
+ N YV L+N+YA G W ++ R+RKQMR + GCSW+ ++ +H+F V D
Sbjct: 590 DPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQRGVIKQPGCSWIEIQSRVHVFMVKDKR 649
Query: 651 HPKTNAIYSVLAIFTGEL 668
HP I+ VL T ++
Sbjct: 650 HPLKKDIHLVLKFLTEQM 667
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 126/463 (27%), Positives = 217/463 (46%), Gaps = 75/463 (16%)
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
+D L+ CV+ + R++HA ++KT + F + L+D Y KC +E+A +V
Sbjct: 17 LDSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKV 76
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
F+ + N S NA+++ + G+++ A F PE D SWN ++SG+ Q+ EE
Sbjct: 77 FDRMPQR-NTFSYNAVLSVLTKFGKLDEAFNVFKSMPE-PDQCSWNAMVSGFAQHDRFEE 134
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
L+ FV M NE++F SALSAC GL ++ +IH+ + K+ + + ++ S +VD
Sbjct: 135 ALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVD 194
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
+Y KC G + A+R FD + +N+V W +L
Sbjct: 195 MYSKC-------------------------------GVVACAQRAFDGMAVRNIVSWNSL 223
Query: 363 FSGYVKAQNCEALFDLLSEFV--TKEGVVTDALILVILLGACALQAALHPGKEIHAYIL- 419
+ Y QN A L FV GV D + L ++ ACA +A+ G +IHA ++
Sbjct: 224 ITCY--EQNGPA-GKALEVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVK 280
Query: 420 RMGVQMDKKLISTLVDMYSKC-------------------------------GNMTYAEI 448
R + D L + LVDMY+KC ++ A +
Sbjct: 281 RDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARL 340
Query: 449 IFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGS 508
+F N +E+++V +N +IA Y +G E+A+ LF + + I P TF +L+A +
Sbjct: 341 MFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLAD 400
Query: 509 VEMGEKYFNSMTAD---YKISPETDHYA--CMIDLYGRANQLE 546
+++G + + ++ E+D + +ID+Y + +E
Sbjct: 401 LKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVE 443
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 142/299 (47%), Gaps = 1/299 (0%)
Query: 258 NEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESML 317
+ FA L +C ++ A+ IH+ ++K S F+ + +VD Y KC A +
Sbjct: 18 DSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVF 77
Query: 318 LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFD 377
RN+FS ++++ + G ++EA F S+ E + W A+ SG+ + E
Sbjct: 78 DRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALR 137
Query: 378 LLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMY 437
+ + E V + L ACA L+ G +IHA I + +D + S LVDMY
Sbjct: 138 FFVD-MHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMY 196
Query: 438 SKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFV 497
SKCG + A+ F R++V +N +I CY +G KA+ +F M++ G++PD +T
Sbjct: 197 SKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLA 256
Query: 498 AILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIP 556
+++SA ++ G + + K + ++D+Y + ++ +A +P
Sbjct: 257 SVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMP 315
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 233/656 (35%), Positives = 374/656 (57%), Gaps = 14/656 (2%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H Q IK GL L N L+ Y+K LR + +FDEMP ++ FSWNT+IS K +
Sbjct: 33 HCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAKQGNF 92
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+ +R L P D V++ +++ GY N G +A+ +F +M S E + +FTV++ L
Sbjct: 93 EVSRRLLYEMPDCDPVSWTAIIVGY-NQFGLFDNAIWMFAKMIS--ERVPPSQFTVSNVL 149
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C + GR++H+F+VK + +SL++MY+KC A VF+ T + N+
Sbjct: 150 SSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVK-NI 208
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM-G 251
+ NA+++ + G+ E+A F + P+ D VSWN++ISGY Q G E L +F +M
Sbjct: 209 STWNALISLYMQSGQFELAASQFEKMPD-RDIVSWNSMISGYSQQGYNLEALVIFSKMLN 267
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
E ++ + T AS LSAC L + K+IH+++L+ ++ V + ++ +Y K +
Sbjct: 268 EPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVE 327
Query: 312 YAESMLLLKGVRNS----FSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
A L+++ R S + +S++ GY+ GN++ AR F+ L +++VV WTA+ GYV
Sbjct: 328 IAR--LIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYV 385
Query: 368 KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDK 427
+ +L + EG ++ L +L + L GK+IHA ++ G
Sbjct: 386 QNGLWNDALELF-RLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTP 444
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQ-NFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
+ + L+ MY+K GN+ A+ +F ++++V + MI A HG ++AI LFE ML
Sbjct: 445 SVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLS 504
Query: 487 KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLE 546
G+KPD +T+V +LSA H G VE G KY+N MT ++I P HYACMIDLYGRA L+
Sbjct: 505 VGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQ 564
Query: 547 KAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYA 606
+A F++S+P E D + GS L C++++NA+LA A E+LL ++ N Y+ LANVY+
Sbjct: 565 EAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYS 624
Query: 607 AEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLA 662
A G W + RK M+ + G SW+++++E+H F V DV HP+ + IY ++A
Sbjct: 625 ACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMA 680
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 115/452 (25%), Positives = 221/452 (48%), Gaps = 40/452 (8%)
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L V++ + GR +H ++K + +++L+ Y+K A VF+ + +
Sbjct: 17 LQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLK-S 75
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
S N +++ ++G E++ + + P+ D VSW +I GY Q G + + +F +M
Sbjct: 76 TFSWNTLISGYAKQGNFEVSRRLLYEMPDC-DPVSWTAIIVGYNQFGLFDNAIWMFAKMI 134
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
V ++ T ++ LS+C + + ++IHS+V+K GL S V++ ++++Y KC +
Sbjct: 135 SERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPV 194
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV-KAQ 370
A+ + V+N + +++I Y G E A F+ + ++++V W ++ SGY +
Sbjct: 195 IAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGY 254
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM--------- 421
N EAL + S+ + + + D L +L ACA L+ GK+IHAYILR
Sbjct: 255 NLEALV-IFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVG 313
Query: 422 -----------GVQMDKKLI-------------STLVDMYSKCGNMTYAEIIFQNFIERD 457
GV++ + ++ ++L+D Y+K GN+ A IF +RD
Sbjct: 314 NALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRD 373
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK-YF 516
+V + MI Y +G A+ LF M+ +G +P++ T A+LS +E G++ +
Sbjct: 374 VVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHA 433
Query: 517 NSMTADYKISPETDHYACMIDLYGRANQLEKA 548
+++ A +P + +I +Y + + A
Sbjct: 434 SAIKAGESSTPSVTN--ALIAMYAKTGNINVA 463
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 160/327 (48%), Gaps = 50/327 (15%)
Query: 262 FASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKG 321
FA L +++ + +H ++K GL ++ + ++ Y K ++ +A +
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 322 VRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFD---- 377
++++FS +++I GY+ QGN E +RR + + + V WTA+ GY N LFD
Sbjct: 73 LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGY----NQFGLFDNAIW 128
Query: 378 LLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMY 437
+ ++ ++ E V + +L +CA L G++IH++++++G+ + ++L++MY
Sbjct: 129 MFAKMIS-ERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMY 187
Query: 438 SKCGNMTYAEII-------------------------------FQNFIERDLVLYNVMIA 466
+KCG+ A+++ F+ +RD+V +N MI+
Sbjct: 188 AKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMIS 247
Query: 467 CYAHHGHEEKAILLFEEML-EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKI 525
Y+ G+ +A+++F +ML E +KPD T +ILSA + + +G++ Y +
Sbjct: 248 GYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIH-----AYIL 302
Query: 526 SPETDHYA----CMIDLYGRANQLEKA 548
ET+ +I +Y ++ +E A
Sbjct: 303 RAETETSGAVGNALISMYAKSGGVEIA 329
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 230/657 (35%), Positives = 361/657 (54%), Gaps = 36/657 (5%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
N +A H IK+ T N LI+ YSK + +R +FD+MP+ N FSWNT++S
Sbjct: 20 NQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTMLS 79
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
A KS DL + +F P++D V++NS++ GY+ G +A+K + M D + ++
Sbjct: 80 AYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYV-CYGSVVEAVKTYNSMMK-DGVLNLN 137
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
T ++ L L V GRQ+H +VK A F SSL+DMY+K A +VF+
Sbjct: 138 RITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFD 197
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
+E N++ N M+ R G ++ + + F E D++SW T+I+G +QNG E +
Sbjct: 198 E-VQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKE-RDSISWTTMITGLIQNGLEAEAM 255
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
LF M + G+ +++TF S L+AC GLR +K KEIH+ ++++G N FV S +VD+Y
Sbjct: 256 DLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMY 315
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
CKC ++ YAE++ +N S ++M+VGY G EEA R F
Sbjct: 316 CKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVF---------------- 359
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
C+ + + G+ D L ++ +CA A+L G + H L G+
Sbjct: 360 -------CD---------MQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLI 403
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
+ + L+ +Y KCG++ + +F RD V + +++ YA G + I LFE M
Sbjct: 404 SFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERM 463
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
L +G+KPDAVTF+A+LSA G VE G++YF SM D+ I P +DHY CMIDL+GRA +
Sbjct: 464 LVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGR 523
Query: 545 LEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANV 604
LE+A F+ +P D++ + L+ CRL N E+ A E LL L+ N A Y+ L+++
Sbjct: 524 LEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKWAAESLLELDPQNPAGYILLSSI 583
Query: 605 YAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
YAA+G W+ + ++R+ MR + G SW+ + +++IF+ D S P ++ IY+ L
Sbjct: 584 YAAKGKWSNVAQLRRGMREKGARKEPGFSWIKYKSKVYIFSADDQSSPFSDQIYAEL 640
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 125/416 (30%), Positives = 210/416 (50%), Gaps = 5/416 (1%)
Query: 134 LCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLI 193
LC + N ++LH ++K+ + F ++LI+ YSK A VF+ + N
Sbjct: 14 LCCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQP-NSF 72
Query: 194 SKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGEN 253
S N M++A + G++ + F P D VSWN+LISGYV G E +K + M ++
Sbjct: 73 SWNTMLSAYSKSGDLSTMQEIFSIMPN-RDGVSWNSLISGYVCYGSVVEAVKTYNSMMKD 131
Query: 254 GV-RWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
GV N TF++ L V ++IH ++K G + FV S +VD+Y K ++
Sbjct: 132 GVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSV 191
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
A + RN ++MI G G +++++R F + E++ + WT + +G ++
Sbjct: 192 ASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLE 251
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
DL + + +EG+ D +L AC AL GKEIH I+R G + + S
Sbjct: 252 AEAMDLFRD-MRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSA 310
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
LVDMY KC ++ YAE +F+ +++V + M+ Y +G E+A+ +F +M GI+PD
Sbjct: 311 LVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPD 370
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
T +++S+ + S+E G ++ IS T A +I LYG+ +E +
Sbjct: 371 DFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNA-LITLYGKCGSIEDS 425
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 232/654 (35%), Positives = 363/654 (55%), Gaps = 10/654 (1%)
Query: 9 ALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIK 68
A + H + IK+GL + N L+++YSK +RKLFDEMP R FSWNT++SA K
Sbjct: 33 AQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYAK 92
Query: 69 SHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
D+ + FD P +D V++ +M+ GY N Y A+++ EM E I +FT+
Sbjct: 93 RGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYH-KAIRIMGEMMR--EGIEPSQFTL 149
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE 188
T+ L + G+++H+F+VK + +SL++MY+KC A VF+
Sbjct: 150 TNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVV 209
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
+ ++ S NAM+A + G+M++A+ F + E D V+WN++ISGY Q G L +F
Sbjct: 210 K-DISSWNAMIALHMQVGQMDLAMAQFEQMAE-RDIVTWNSMISGYNQRGYDLRALDMFS 267
Query: 249 RMGENG-VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
+M + + + T AS LSAC L + ++IHS ++ G + V + ++ +Y +C
Sbjct: 268 KMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRC 327
Query: 308 ENMNYAESMLLLKGVRNSF--SISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
+ A ++ +G ++ ++++ GY G+M EA+ FDSL +++VV WTA+ G
Sbjct: 328 GGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVG 387
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
Y + +L V +E ++ L +L + A+L GK+IH ++ G
Sbjct: 388 YEQHGLYGEAINLFRSMVGEEQR-PNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIY 446
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
+ + L+ MY+K G++T A F ERD V + MI A HGH E+A+ LFE M
Sbjct: 447 SVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETM 506
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
L +G++PD +T+V + SA H G V G +YF+ M KI P HYACM+DL+GRA
Sbjct: 507 LMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGL 566
Query: 545 LEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANV 604
L++A EF++ +P E D V GS L+ CR+ +N +L A E+LL LE N Y LAN+
Sbjct: 567 LQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALANL 626
Query: 605 YAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
Y+A G W E +IRK M+ + + G SW+ V+H++H F V D HP+ N IY
Sbjct: 627 YSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHAFGVEDGIHPQKNEIY 680
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 228/662 (34%), Positives = 371/662 (56%), Gaps = 19/662 (2%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNL-----LRESRKLFDEMP--ERNVFSWNTIISA 65
H +A+KAGL + N L+ Y+ RE+R+LFDE+P +RNVF+WN+++S
Sbjct: 46 HARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLFDEIPAAQRNVFTWNSLLSL 105
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
KS L AR++F P +D V++ M+ G +N G +A+K+F++M + + + +
Sbjct: 106 YAKSGRLADARAVFAEMPERDPVSWTVMVVG-LNRVGRFGEAIKMFLDMVT--DGLSPTQ 162
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
FT+T+ L+ C G GR++H+F+VK + +S+++MY KC E A VFE
Sbjct: 163 FTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAVFER 222
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
E ++ S NAMV+ G M++AL F P+ VSWN +I+GY QNG + L
Sbjct: 223 MPER-SVSSWNAMVSLDAHLGRMDLALSLFENMPD-RTIVSWNAVIAGYNQNGLNAKALW 280
Query: 246 LFVRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
F RM + + +E T S LSAC L V K++H+++L++ + V++ ++ +Y
Sbjct: 281 FFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMY 340
Query: 305 CKCENMNYAESML--LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
K ++ A ++ + N S ++++ GY G+M+ AR FD ++ ++VV WTA+
Sbjct: 341 AKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAM 400
Query: 363 FSGYVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
GY + N EA+ L + + G ++ + +L CA A L GK+IH +R
Sbjct: 401 IVGYEQNGHNDEAM--ELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRS 458
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKAILL 480
+ + +++V MY++ G++ +A +F ++ V + MI A HG E A+ L
Sbjct: 459 LQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGL 518
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
FEEML G+KPD +TFV +LSA H G V+ G++YF + + I PE HYACM+DL
Sbjct: 519 FEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLA 578
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQ 600
RA +A EF++ +P E DA+ GS L+ CR+++NA+LA A EKLL ++ N Y
Sbjct: 579 RAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNADLAELAAEKLLSIDPGNSGAYSA 638
Query: 601 LANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSV 660
L+NVY+A G W + +I K+ + + G SW ++ + +H+F DV HP+ + +Y
Sbjct: 639 LSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSWTHIGNRVHVFGADDVLHPQRDTVYRT 698
Query: 661 LA 662
A
Sbjct: 699 AA 700
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 134/273 (49%), Gaps = 12/273 (4%)
Query: 263 ASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY---CKCENMNYAESMLLL 319
A L C N + IH+ +K GL+++ ++ + ++ Y + E+ L
Sbjct: 27 ARLLQRCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLF 86
Query: 320 KGV----RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEAL 375
+ RN F+ +S++ Y+ G + +AR F + E++ V WT + G +
Sbjct: 87 DEIPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEA 146
Query: 376 FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVD 435
+ + VT +G+ L +L +CA A G+++H++++++G+ + +++++
Sbjct: 147 IKMFLDMVT-DGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLN 205
Query: 436 MYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVT 495
MY KCG+ A +F+ ER + +N M++ AH G + A+ LFE M ++ I V+
Sbjct: 206 MYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTI----VS 261
Query: 496 FVAILSAFRHCGSVEMGEKYFNSMTADYKISPE 528
+ A+++ + G +F+ M + ++P+
Sbjct: 262 WNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPD 294
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 231/673 (34%), Positives = 360/673 (53%), Gaps = 63/673 (9%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
+RS + + + H + + ++ N+LI +Y K + L ++RKLFD MP+RN F+WN
Sbjct: 26 LRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMPQRNTFTWN 85
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
++IS KS L +A LF S P D ++NSM+ G+ + +E ++L+ F++M D
Sbjct: 86 SLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFE-ESLEYFVKMHRED-- 142
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
++E++ S L+ C L+++ G Q+HA + K+ + S+LIDMYSKC A
Sbjct: 143 FLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAE 202
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
VF G E NL++ WN+LI+ Y QNG A
Sbjct: 203 EVFSGMIER-NLVT--------------------------------WNSLITCYEQNGPA 229
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFV-SSG 299
E L++FVRM ++G+ +E T AS +SAC L +K +IH+ V+K + V +
Sbjct: 230 SEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNA 289
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
+VD+Y KC +N A + +RN S +SM+ GY+ +++ AR F +T++NVV W
Sbjct: 290 LVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSW 349
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
AL +GY T+ G +AL L LL + ++ P +L
Sbjct: 350 NALIAGY-----------------TQNGENEEALRLFRLLK----RESIWPTHYTFGNLL 388
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
+ + + ++L+DMY KCG++ +F+ ERD V +N +I YA +G+ +A+
Sbjct: 389 KSDIFVG----NSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQ 444
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
+F +ML G KPD VT + +L A H G VE G YF SM ++ + P DHY CM+DL
Sbjct: 445 IFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSME-EHGLIPLKDHYTCMVDLL 503
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYV 599
GRA L +A ++++P DAV+ GS L C+++ N E+ A EKLL ++ N YV
Sbjct: 504 GRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYV 563
Query: 600 QLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYS 659
L+N+YA G W ++ R+RK MR + GCSW+ VE +H+F V D SHP IYS
Sbjct: 564 LLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYS 623
Query: 660 VLAIFTGELYEIA 672
VL + T ++ +
Sbjct: 624 VLKMLTEQMKRVG 636
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 200/433 (46%), Gaps = 81/433 (18%)
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L+ C++ + R +HA ++ T F + LID+Y KC C ++A ++F+ + N
Sbjct: 22 LDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMPQR-N 80
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
+ N++++ + G ++ A + F PE D SWN+++SG+ Q+ EE L+ FV+M
Sbjct: 81 TFTWNSLISVLTKSGFLDEAARLFGSMPE-PDQCSWNSMVSGFAQHDRFEESLEYFVKMH 139
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
NE++F SALSAC GL ++ ++H+ V K+ ++ ++ S ++D+Y KC ++
Sbjct: 140 REDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVA 199
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
AE + F + E+N+V W +L + Y QN
Sbjct: 200 CAEEV-------------------------------FSGMIERNLVTWNSLITCY--EQN 226
Query: 372 CEALFDLLSEFV--TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG-VQMDKK 428
A + L FV G+ D + L ++ ACA AL G +IHA +++ + D
Sbjct: 227 GPA-SEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLV 285
Query: 429 LISTLVDMYSKC-------------------------------GNMTYAEIIFQNFIERD 457
L + LVDMY+KC ++ A +F +R+
Sbjct: 286 LGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRN 345
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA-----------FRHC 506
+V +N +IA Y +G E+A+ LF + + I P TF +L + + C
Sbjct: 346 VVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLKSDIFVGNSLIDMYMKC 405
Query: 507 GSVEMGEKYFNSM 519
GS+E G + F M
Sbjct: 406 GSIEDGSRVFEKM 418
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 151/293 (51%), Gaps = 5/293 (1%)
Query: 258 NEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESML 317
N FA L +C R+ + + +H+ +L F+ + ++DVY KC+ ++ A +
Sbjct: 14 NSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLF 73
Query: 318 LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFD 377
RN+F+ +S+I + G ++EA R F S+ E + W ++ SG+ + E +
Sbjct: 74 DRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFE---E 130
Query: 378 LLSEFVT--KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVD 435
L FV +E + + L ACA L+ G ++HA + + D + S L+D
Sbjct: 131 SLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALID 190
Query: 436 MYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVT 495
MYSKCG++ AE +F IER+LV +N +I CY +G +A+ +F M++ G++PD VT
Sbjct: 191 MYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVT 250
Query: 496 FVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
+++SA +++ G + + K + ++D+Y + +++ +A
Sbjct: 251 LASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEA 303
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 231/666 (34%), Positives = 368/666 (55%), Gaps = 18/666 (2%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLR----ESRKLFDEMP--ERNV 56
++N H A+KAGL ++ N L+ Y++ + R E+R+LFD++P RN
Sbjct: 38 AVNPSAGRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLFDDIPYARRNA 97
Query: 57 FSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQS 116
F+WN+++S KS L AR +F P +D V++ M+ G +N G DA+K F++M
Sbjct: 98 FTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVG-LNRAGRFWDAVKTFLDM-- 154
Query: 117 ADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCY 176
E + +F +T+ L+ C G GR++H+F++K + +S++ MY KC
Sbjct: 155 VGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDA 214
Query: 177 EEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQ 236
E A VFE S NAMV+ +G M++AL F E VSWN +I+GY Q
Sbjct: 215 ETARAVFERMKVRSE-SSWNAMVSLYTHQGRMDLALSMF-ENMEERSIVSWNAIIAGYNQ 272
Query: 237 NGDAEEGLKLFVRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF 295
NG + LK F RM + + +E T S LSAC LR +K K++HS++L+ G+ +
Sbjct: 273 NGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQ 332
Query: 296 VSSGIVDVYCKCENMNYAESMLLLKGVR--NSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
+ + ++ Y K ++ A ++ V N S ++++ GY G+ ++AR FD +
Sbjct: 333 IMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNN 392
Query: 354 KNVVVWTALFSGYVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
++V+ WTA+ GY + QN EA+ +L + + G ++ L +L ACA A L GK
Sbjct: 393 RDVIAWTAMIVGYEQNGQNDEAM-ELFRSMI-RSGPEPNSHTLAAVLSACASLAYLGYGK 450
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER-DLVLYNVMIACYAHH 471
+IH +R + + + ++ +Y++ G++ A +F R + V + MI A H
Sbjct: 451 QIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQH 510
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH 531
G E+AI+LFEEML G+KPD VT++ + SA H G ++ G++Y+ M ++ I PE H
Sbjct: 511 GLGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSH 570
Query: 532 YACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLE 591
YACM+DL RA L +A EF++ +P D V+ GS L CR+ +NA+LA A EKLL ++
Sbjct: 571 YACMVDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSID 630
Query: 592 GNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSH 651
+N Y LANVY+A G W + RI K + + G SW +V+ ++H+F DV H
Sbjct: 631 PDNSGAYSALANVYSACGRWNDAARIWKLRKDKAVKKETGFSWTHVQSKVHVFGADDVLH 690
Query: 652 PKTNAI 657
P+ +AI
Sbjct: 691 PQRDAI 696
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 136/275 (49%), Gaps = 15/275 (5%)
Query: 262 FASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN--YAESMLLL 319
FA L N + IH+ +K GL+ + ++ + ++ Y + + E+ L
Sbjct: 28 FARLLQLSQTAVNPSAGRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLF 87
Query: 320 KGV----RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEAL 375
+ RN+F+ +S++ Y+ G + +AR F + E++ V WT + G +A
Sbjct: 88 DDIPYARRNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGR---F 144
Query: 376 FDLLSEFV--TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL 433
+D + F+ EG+ +L +L +CA A G+++H++++++G+ + +++
Sbjct: 145 WDAVKTFLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSV 204
Query: 434 VDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDA 493
+ MY KCG+ A +F+ R +N M++ Y H G + A+ +FE M E+ I
Sbjct: 205 LYMYGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSI---- 260
Query: 494 VTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE 528
V++ AI++ + G +M K+F+ M + P+
Sbjct: 261 VSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPD 295
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 223/649 (34%), Positives = 369/649 (56%), Gaps = 10/649 (1%)
Query: 17 IKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQAR 76
+K GLT + N L+++Y+K ++ LF+EMP + FSWNTI+S K L++A
Sbjct: 2 VKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAH 61
Query: 77 SLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCV 136
+FD P +D V++ +++ GY N G DA+K+F++M + + +FT+T+ L C
Sbjct: 62 QVFDLIPVRDSVSWTTIIVGY-NQMGRFEDAIKIFVDM--VKDKVLPTQFTLTNVLASCA 118
Query: 137 KLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKN 196
+ G G+++H+F+VK A +SL++MY+K + A VF+ N S N
Sbjct: 119 ATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLR-NTSSWN 177
Query: 197 AMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR-MGENGV 255
AM++ G +++AL F E D VSWN++I+G Q+G E L+ F + + +
Sbjct: 178 AMISLHMNCGRVDLALAQFELLSE-RDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSL 236
Query: 256 RWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAES 315
+ + + ASALSAC L + K+IH ++++ ++ V + ++ +Y K + A
Sbjct: 237 KPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARR 296
Query: 316 MLLLKGVRN--SFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE 373
++ G+ + + ++++ GY G++ AR+ F+SL + +VV WTA+ GYV+
Sbjct: 297 IIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNN 356
Query: 374 ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL 433
++ V+ EG ++ L +L A + +L+ GK+IHA +R G + + + L
Sbjct: 357 DAIEVFKTMVS-EGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNAL 415
Query: 434 VDMYSKCGNMTYAEIIFQNFIE-RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
MY+K G++ A +F + RD V + MI A HG E+AI LFE+ML GIKPD
Sbjct: 416 TTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPD 475
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
+T+V +LSA H G VE G YF+ M +KI P HYACM+DL+GRA L++A +F+
Sbjct: 476 HITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFV 535
Query: 553 KSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWA 612
+++P E D + GS L+ C++ +N +LA A E+LL +E NN Y LANVY++ G W
Sbjct: 536 ENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWD 595
Query: 613 EMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+ +IRK M+ + G SWV ++++ H+F V D HP+ + IY ++
Sbjct: 596 DAAKIRKLMKARGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYKMM 644
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 142/562 (25%), Positives = 268/562 (47%), Gaps = 45/562 (8%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K GL N L+++Y+K L+ ++ +FD M RN SWN +IS + +
Sbjct: 130 HSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRV 189
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
A + F+ +D+V++NSM+ G N G++ +AL+ F + D ++ D F++ S L
Sbjct: 190 DLALAQFELLSERDIVSWNSMIAG-CNQHGFDNEALQFFSSILK-DTSLKPDRFSLASAL 247
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE-GCTEEVN 191
+ C L + FG+Q+H ++V+T DASG ++LI MY+K E A R+ E +++
Sbjct: 248 SACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLD 307
Query: 192 LISKNAMVAACCREGEMEMALKTF--WRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
+I+ A++ + G++ A + F + P D V+W +I GYVQNG + +++F
Sbjct: 308 VIAFTALLNGYVKLGDITPARQIFNSLKDP---DVVAWTAMIVGYVQNGLNNDAIEVFKT 364
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
M G R N T A+ LSA + ++ K+IH+ +++G +P V + + +Y K +
Sbjct: 365 MVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGS 424
Query: 310 MNYAESML-LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
+N A + LL+ R++ S +SMI+ + G EEA F+ + + + G +
Sbjct: 425 INGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLS 484
Query: 369 A-------QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
A + + FDL+ + ++ +V L G L +E + ++ M
Sbjct: 485 ACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLL------QEAYKFVENM 538
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFI---ERDLVLYNVMIACYAHHGHEEKAI 478
++ D +L+ N+ A++ + + + Y+ + Y+ G + A
Sbjct: 539 PMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAA 598
Query: 479 LLFEEMLEKGIKPD-AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID 537
+ + M +G+K + +++V I + H VE G + P+ D +
Sbjct: 599 KIRKLMKARGVKKEQGLSWVQIQNK-THVFGVEDG------------LHPQKD------E 639
Query: 538 LYGRANQLEKAIEFMKSIPTEE 559
+Y +++ K I+ M P E
Sbjct: 640 IYKMMDKIWKEIKKMGFAPDTE 661
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
++++G+ L++ L+++Y+K G A +F + +N +++ YA G EKA
Sbjct: 1 MVKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKA 60
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISP 527
+F+ + + D+V++ I+ + G E K F M D K+ P
Sbjct: 61 HQVFDLIPVR----DSVSWTTIIVGYNQMGRFEDAIKIFVDMVKD-KVLP 105
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 231/668 (34%), Positives = 368/668 (55%), Gaps = 10/668 (1%)
Query: 9 ALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIK 68
A + H + IK+GL + N L+++YSK +RKLFDEMP R FSWNT++SA K
Sbjct: 33 AQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSK 92
Query: 69 SHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
D+ FD P +D V++ +M+ GY N Y A+++ +M E I +FT+
Sbjct: 93 RGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHK-AIRVMGDM--VKEGIEPTQFTL 149
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE 188
T+ L + G+++H+F+VK + +SL++MY+KC A VF+
Sbjct: 150 TNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVV 209
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
++ S NAM+A + G+M++A+ F + E D V+WN++ISG+ Q G L +F
Sbjct: 210 R-DISSWNAMIALHMQVGQMDLAMAQFEQMAE-RDIVTWNSMISGFNQRGYDLRALDIFS 267
Query: 249 RMGENGV-RWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
+M + + + T AS LSAC L + K+IHS ++ G + V + ++ +Y +C
Sbjct: 268 KMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRC 327
Query: 308 ENMNYAESMLLLKGVRNSF--SISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
+ A ++ +G ++ ++++ GY G+M +A+ F SL +++VV WTA+ G
Sbjct: 328 GGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVG 387
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
Y + + +L V G ++ L +L + A+L GK+IH ++ G
Sbjct: 388 YEQHGSYGEAINLFRSMVGG-GQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIY 446
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
+ + L+ MY+K GN+T A F ERD V + MI A HGH E+A+ LFE M
Sbjct: 447 SVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETM 506
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
L +G++PD +T+V + SA H G V G +YF+ M KI P HYACM+DL+GRA
Sbjct: 507 LMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGL 566
Query: 545 LEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANV 604
L++A EF++ +P E D V GS L+ CR+++N +L A E+LL LE N Y LAN+
Sbjct: 567 LQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANL 626
Query: 605 YAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIF 664
Y+A G W E +IRK M+ + + G SW+ V+H++H+F V D +HP+ N IY +
Sbjct: 627 YSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKI 686
Query: 665 TGELYEIA 672
E+ ++
Sbjct: 687 WDEIKKMG 694
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 231/672 (34%), Positives = 363/672 (54%), Gaps = 46/672 (6%)
Query: 7 KEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISAC 66
++A H + I+ N+LI +Y K L +RK+FD M ERNVFS+N+IIS
Sbjct: 41 RDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMSERNVFSFNSIISTL 100
Query: 67 IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEF 126
++ + ++ LF P KD ++NSM+ G+ + +E +AL F+ M D ++++
Sbjct: 101 MRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFE-EALDWFVRMHRDD--FVLNDY 157
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
+ S L+ C +L ++ G Q+H + K+ F S LID YSKC A RVF+G
Sbjct: 158 SFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDG- 216
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
EE N++S N LI+ Y QNG A E L+
Sbjct: 217 MEEKNVVSWNC--------------------------------LITCYEQNGPAIEALEA 244
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFV-SSGIVDVYC 305
F RM E G + +E T AS +SAC L K +IH+ V+K+ N + + +VD+Y
Sbjct: 245 FGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYA 304
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
KC +N A + VRN+ S ++M+ GY+ +++ AR F ++ +K++V W AL +G
Sbjct: 305 KCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAG 364
Query: 366 YVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
Y + +N EAL L + +E V LL A A A L G++ H+++++ G +
Sbjct: 365 YTQNGENEEALG--LFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFR 422
Query: 425 M------DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
D + ++L+DMY KCG++ +F+N +E+D V +N MI YA +G+ +A+
Sbjct: 423 FQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEAL 482
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
LF++MLE G KPD VT + L A H G VE G +YF SMT ++ + P DHY CM+DL
Sbjct: 483 ELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDL 542
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARY 598
GRA LE+A + ++S+P + DAV+ S L+ C+++RN L EK+ ++ + Y
Sbjct: 543 LGRAGCLEEAKDLIESMPKQPDAVVWSSLLSACKVHRNITLGKYVAEKIFEIDPTSSGPY 602
Query: 599 VQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
V LAN+Y+ G W + +RK MR + GCSW+ ++ +H+F V D HP+ IY
Sbjct: 603 VLLANMYSELGRWGDAVSVRKLMRRRGVVKQPGCSWIDIQSNVHVFMVKDKRHPQKKEIY 662
Query: 659 SVLAIFTGELYE 670
S+L + T + +
Sbjct: 663 SILKLLTKHMRQ 674
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 133/478 (27%), Positives = 223/478 (46%), Gaps = 76/478 (15%)
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
D L+LCVKL + R +H +++T F + LID+Y KC + A +VF
Sbjct: 23 DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
+ +E N+ S N++++ R G ++ + F PE D SWN++I+G+ Q+ EE
Sbjct: 83 DRMSER-NVFSFNSIISTLMRWGFVDESAWLFSLMPE-KDQCSWNSMIAGFAQHDRFEEA 140
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
L FVRM + N+++F S LSAC L+++K +IH + K+ + F+ SG++D
Sbjct: 141 LDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDF 200
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y KC G + ARR FD + EKNVV W L
Sbjct: 201 YSKC-------------------------------GLVGCARRVFDGMEEKNVVSWNCLI 229
Query: 364 SGYVKAQNCEALFDLLSEF--VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+ Y QN A+ + L F +T+ G D + L ++ ACA AA G +IHA +++
Sbjct: 230 TCY--EQNGPAI-EALEAFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIHARVVKS 286
Query: 422 G-VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFI-------------------------- 454
+ D L + LVDMY+KCG + A +F
Sbjct: 287 DKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAARSM 346
Query: 455 -----ERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSV 509
++D+V +N +IA Y +G E+A+ LF + + + P TF +L+A + +
Sbjct: 347 FATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADL 406
Query: 510 EMGEKYFNSMTAD---YKISPETDHYA--CMIDLYGRANQLEKAIEFMKSIPTEEDAV 562
E+G + + + ++ E D + +ID+Y + +E+ + +++ E+D V
Sbjct: 407 ELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENM-VEKDHV 463
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 125/483 (25%), Positives = 217/483 (44%), Gaps = 86/483 (17%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R +LK H K+ +L + LI YSK L+ +R++FD M E+NV SWN
Sbjct: 168 RLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGMEEKNVVSWNC 227
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I+ C + + G +AL+ F M +
Sbjct: 228 LIT-CYEQN-------------------------------GPAIEALEAFGRM--TELGF 253
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV-SSLIDMYSKCRCYEEAC 180
+ DE T+ S ++ C L G Q+HA +VK+ + + ++L+DMY+KC EA
Sbjct: 254 KPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEAR 313
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
VF+ N +S+ MV+ + ++ A ++ + + D VSWN LI+GY QNG+
Sbjct: 314 CVFDRMPVR-NAVSETTMVSGYAKSASVKAA-RSMFATIKQKDIVSWNALIAGYTQNGEN 371
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI------SNP 294
EE L LF + V +TF + L+A L +++ ++ HS V+K+G +
Sbjct: 372 EEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDI 431
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
FV + ++D+Y KC G++EE R F+++ EK
Sbjct: 432 FVGNSLIDMYMKC-------------------------------GSVEEGLRVFENMVEK 460
Query: 355 NVVVWTALFSGYVKAQNCEALFDL-LSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
+ V W + GY AQN + L L + + + G D + ++ L AC+ + G+
Sbjct: 461 DHVSWNTMIIGY--AQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRR 518
Query: 414 IHAYILRM----GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER-DLVLYNVMI-AC 467
Y M G+ K + +VD+ + G + A+ + ++ ++ D V+++ ++ AC
Sbjct: 519 ---YFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLSAC 575
Query: 468 YAH 470
H
Sbjct: 576 KVH 578
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 60/133 (45%), Gaps = 4/133 (3%)
Query: 390 TDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEII 449
TD+ LL C + + +H +++ + + + L+D+Y KCG + YA +
Sbjct: 22 TDSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKV 81
Query: 450 FQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSV 509
F ER++ +N +I+ G +++ LF M EK D ++ ++++ F
Sbjct: 82 FDRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEK----DQCSWNSMIAGFAQHDRF 137
Query: 510 EMGEKYFNSMTAD 522
E +F M D
Sbjct: 138 EEALDWFVRMHRD 150
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 230/667 (34%), Positives = 366/667 (54%), Gaps = 18/667 (2%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSK----HNLLRESRKLFDEMP--ERNV 56
++N H A+KAGL ++T N L+ Y+ RE+R LFD++P RN
Sbjct: 222 AVNPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLFDDIPYARRNA 281
Query: 57 FSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQS 116
F+WN+++S KS L A +F P +D V++ M+ G +N G DA+K F++M S
Sbjct: 282 FTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVG-LNRSGRFWDAVKTFLDMVS 340
Query: 117 ADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCY 176
E +FT+T+ L+ C + G GR++H F+VK + +S++ MY KC
Sbjct: 341 --EGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDA 398
Query: 177 EEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQ 236
E A VFE + ++ S N MV+ +G ME+A+ F E VSWNT+I+GY Q
Sbjct: 399 ETARAVFER-MQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVE-RSIVSWNTIIAGYNQ 456
Query: 237 NGDAEEGLKLFVRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF 295
NG LK F RM + + + T S LSAC LR +K K++HS++L+ G+ +
Sbjct: 457 NGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQ 516
Query: 296 VSSGIVDVYCKCENMNYAESMLLLKGVR--NSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
+ + ++ Y K ++ A ++ V N S ++++ GY G+ ++AR FD +
Sbjct: 517 IMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNN 576
Query: 354 KNVVVWTALFSGYVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
++V+ WTA+ GY + QN EA+ S + G ++ L +L ACA A L GK
Sbjct: 577 RDVIAWTAMIVGYHQNGQNDEAMELFRSMILI--GPEPNSHTLAAVLSACASLAYLDYGK 634
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER-DLVLYNVMIACYAHH 471
+IH +R + + + ++ +Y++ G++ A +F R + + + MI A H
Sbjct: 635 QIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQH 694
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH 531
G E+A++LFEEM+ G+KPD +T+V +LSA H G V+ G++Y+ M ++ I P+ H
Sbjct: 695 GLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSH 754
Query: 532 YACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLE 591
YACM+DL+ RA L +A EF++ +P D V+ GS L CR+ +NA+LA A KLL ++
Sbjct: 755 YACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSID 814
Query: 592 GNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSH 651
+N Y LANVY+A G W + RI K + + G SW +V ++H+F DV H
Sbjct: 815 PHNSGAYSALANVYSACGRWNDAARIWKLRKDKGVKKETGFSWTHVRGKVHVFGADDVLH 874
Query: 652 PKTNAIY 658
P+ ++IY
Sbjct: 875 PQRDSIY 881
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 197/421 (46%), Gaps = 39/421 (9%)
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKC----RCYEEACRVFEGCT 187
L LC +N GR +HA VK S + ++L+ Y+ C+ EA +F+
Sbjct: 216 LQLCRTAVNPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLFDDIP 275
Query: 188 -EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
N + N++++ + G + A F P+ DAVSW +I G ++G + +K
Sbjct: 276 YARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPD-RDAVSWTIMIVGLNRSGRFWDAVKT 334
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
F+ M G ++ T + LS+C + +++H +V+K GL S V++ ++ +Y K
Sbjct: 335 FLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGK 394
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
C + A ++ VR+ S + M+ Y+ QG ME A F+++ E+++V W + +GY
Sbjct: 395 CGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGY 454
Query: 367 VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMD 426
+ S ++ + DA + +L ACA L GK++H+YILR G+
Sbjct: 455 NQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCS 514
Query: 427 KKLISTLVDMYSKCGNMTYAE-------------IIFQNFIE------------------ 455
++++ L+ Y+K G++ A I F +E
Sbjct: 515 SQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIM 574
Query: 456 --RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
RD++ + MI Y +G ++A+ LF M+ G +P++ T A+LSA ++ G+
Sbjct: 575 NNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGK 634
Query: 514 K 514
+
Sbjct: 635 Q 635
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 134/275 (48%), Gaps = 15/275 (5%)
Query: 262 FASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK--CENMNYAESMLLL 319
+A L C N + IH+ +K GL+ + ++ + ++ Y + E+ L
Sbjct: 212 YARLLQLCRTAVNPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLF 271
Query: 320 KGV----RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEAL 375
+ RN+F+ +S++ Y+ G + +A F + +++ V WT + G ++
Sbjct: 272 DDIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGR---F 328
Query: 376 FDLLSEFV--TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL 433
+D + F+ EG L +L +CA A G+++H +++++G+ + +++
Sbjct: 329 WDAVKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSV 388
Query: 434 VDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDA 493
+ MY KCG+ A +F+ R + +NVM++ Y H G E A+ +FE M+E+ I
Sbjct: 389 LYMYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSI---- 444
Query: 494 VTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE 528
V++ I++ + G M K+F+ M + + P+
Sbjct: 445 VSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPD 479
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/646 (32%), Positives = 347/646 (53%), Gaps = 35/646 (5%)
Query: 25 TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPH 84
T N L+ Y K +R++FD MP N+F++N ++S + L +LF S
Sbjct: 41 TYLLNHLLTAYGKAGRHARARRVFDAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQ 100
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
+D+V+YN+++ G+ + G A A+++++ + AD +R T+++ + L + G
Sbjct: 101 RDIVSYNAVIAGF-SGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALG 159
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
+Q H +++ A+ F S L+DMY+K +A R F+ + N++ N M+ R
Sbjct: 160 KQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDE-VDSKNVVMYNTMITGLLR 218
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFAS 264
+E A + F + D+++W T+++G+ QNG E L++F RM G+ +++TF S
Sbjct: 219 CKMVEEARRLFEVMTD-RDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGS 277
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
L+AC L ++ K+IH+++++ N FV S +VD+Y KC ++ AE++
Sbjct: 278 ILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETV-------- 329
Query: 325 SFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVT 384
F +T KN++ WTAL GY + E + SE +
Sbjct: 330 -----------------------FRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSE-MQ 365
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
++G+ D L ++ +CA A+L G + H L G+ + + LV +Y KCG++
Sbjct: 366 RDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIE 425
Query: 445 YAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR 504
A +F D V + +++ YA G ++ I LFE+ML KG+KPD VTF+ +LSA
Sbjct: 426 DAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACS 485
Query: 505 HCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVIL 564
G VE G YF+SM D+ I P DHY CMIDLY R+ +L++A EF+K +P DA+
Sbjct: 486 RAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGW 545
Query: 565 GSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGM 624
G+ L+ CRL + E+ A E LL ++ N A YV L +++AA+G W E+ ++R+ MR
Sbjct: 546 GTLLSACRLRGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDR 605
Query: 625 KGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYE 670
+ + GCSW+ ++++HIF+ D SHP + IY L ++ E
Sbjct: 606 QVKKEPGCSWIKYKNKVHIFSADDQSHPCSKGIYEKLEWLNSKMLE 651
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/476 (26%), Positives = 229/476 (48%), Gaps = 70/476 (14%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H Q ++ G + L+ +Y+K +L+ ++++ FDE+ +NV +NT+I+ ++ +
Sbjct: 163 HCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMV 222
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
++AR LF+ +D +T+ +M+ G+ G E++AL++F M+ + I +D++T S L
Sbjct: 223 EEARRLFEVMTDRDSITWTTMVTGFTQ-NGLESEALEIFRRMRF--QGIAIDQYTFGSIL 279
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C L + G+Q+HA++++T D + F S+L+DMYSKCR + A
Sbjct: 280 TACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLA------------- 326
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+T +R+ + +SW LI GY QNG +EE +++F M
Sbjct: 327 --------------------ETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQR 366
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+G+ +++T S +S+C L +++ + H L +GL+ VS+ +V +Y KC
Sbjct: 367 DGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKC----- 421
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G++E+A R FD ++ + V WTAL SGY +
Sbjct: 422 --------------------------GSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRA 455
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE-IHAYILRMGVQMDKKLIS 431
+ DL + + K GV D + + +L AC+ + G+ H+ G+ +
Sbjct: 456 KETIDLFEKMLAK-GVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYT 514
Query: 432 TLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
++D+YS+ G + A E I Q + D + + +++ G E E +LE
Sbjct: 515 CMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAENLLE 570
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 82/211 (38%), Gaps = 41/211 (19%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L+E H A+ +GL +N L+ +Y K + ++ +LFDEM + SW ++S
Sbjct: 388 SLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVS 447
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
GY G + + LF +M + + ++ D
Sbjct: 448 -------------------------------GYAQF-GRAKETIDLFEKMLA--KGVKPD 473
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV----SSLIDMYSKCRCYEEAC 180
T L+ C + GF + ++ D + + +ID+YS+ +EA
Sbjct: 474 GVTFIGVLSACSR---AGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAE 530
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMA 211
+ + I +++AC G+ME+
Sbjct: 531 EFIKQMPMHPDAIGWGTLLSACRLRGDMEIG 561
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 228/668 (34%), Positives = 361/668 (54%), Gaps = 46/668 (6%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
RS + ++ H IK+ T N+LI +Y K + +RKLFD M ERN+FSWN+
Sbjct: 31 RSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRMLERNIFSWNS 90
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
II A KS L A +F+ P D ++NSM+ G+ G +AL F +M
Sbjct: 91 IICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGF-EQHGRFDEALVYFAQMHG--HGF 147
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
++E++ S L+ C L ++ G Q+H+ + +++ + + S+L+DMYSKC E A
Sbjct: 148 LVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQS 207
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
VF+ EM +++ VSWN+LI+ Y QNG +
Sbjct: 208 VFD------------------------EMTVRS---------RVSWNSLITCYEQNGPVD 234
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFV-SSGI 300
E LK+FV M + GV +E T AS +SAC + +K ++IH+ V+K N + + +
Sbjct: 235 EALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNAL 294
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
+D+Y KC +N A + + +R+ S +SM+ GY+ ++ AR F ++ K+V+ W
Sbjct: 295 LDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWN 354
Query: 361 ALFSGYVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
AL +G + +N EAL +L + +E V LL ACA A L G++ H+++L
Sbjct: 355 ALIAGCTQNGENEEAL--ILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVL 412
Query: 420 RMGVQM------DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH 473
+ G + D + ++L+DMY KCG++ +FQ+ +E+D V +N MI YA +G
Sbjct: 413 KHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGF 472
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA 533
KA+ +F +MLE G PD VT + +L A H G ++ G YF SMTA + + P DHY
Sbjct: 473 GNKALEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYT 532
Query: 534 CMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGN 593
CM+DL GRA LE+A ++ + + DA++ GS L C+++RN +L +KLL ++
Sbjct: 533 CMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPE 592
Query: 594 NKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPK 653
N YV L+N+YA +W + R+RK MR + GCSW+ ++ E+++F V D H +
Sbjct: 593 NSGPYVLLSNMYAENRDWKNVVRVRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHAR 652
Query: 654 TNAIYSVL 661
IY VL
Sbjct: 653 KKEIYMVL 660
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 125/477 (26%), Positives = 232/477 (48%), Gaps = 72/477 (15%)
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
+D + LN C + + ++HA ++K+ + F + LID+Y KC C + A ++
Sbjct: 17 LDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKL 76
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
F+ E N+ S N+++ A + G ++ A+ F + P++ D SWN++ISG+ Q+G +E
Sbjct: 77 FDRMLER-NIFSWNSIICAFTKSGFLDDAVHIFEKMPQV-DQCSWNSMISGFEQHGRFDE 134
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
L F +M +G NE++F SALSAC GL+++K +IHS V ++ +S+ ++ S +VD
Sbjct: 135 ALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVD 194
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
+Y KC + YA+S+ VR+ S +S+I Y G ++EA + F +
Sbjct: 195 MYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEM----------- 243
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
K GV D + L ++ ACA +A+ G++IHA +++
Sbjct: 244 ---------------------IKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCD 282
Query: 423 -VQMDKKLISTLVDMYSKCGNMTYAEIIFQ------------------------------ 451
+ D L + L+DMY+KC + A IIF
Sbjct: 283 EFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMF 342
Query: 452 -NFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVE 510
N + +D++ +N +IA +G E+A++LF + + + P TF +L+A + ++
Sbjct: 343 SNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQ 402
Query: 511 MGEKYFNSMTAD---YKISPETDHYA--CMIDLYGRANQLEKAIEFMKSIPTEEDAV 562
+G + + + ++ ++D + +ID+Y + +E + + E+D V
Sbjct: 403 LGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHM-LEKDCV 458
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 218/649 (33%), Positives = 343/649 (52%), Gaps = 36/649 (5%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + I+ T N LI+ Y K L+ +R +FD +P+ N+FSWNT++SA K L
Sbjct: 28 HCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQPNLFSWNTLLSAYSKLGYL 87
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+ + +FDS P+ D+V++NS+L GY G +++++++ M D + ++ T ++ L
Sbjct: 88 QDMQRVFDSMPNHDVVSWNSLLSGYA-GNGLISESVRVY-NMMLKDGSVNLNRITFSTML 145
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
L V GRQ+H + K + F S L+DMY+K +A R+FE E+ N+
Sbjct: 146 ILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEK-NI 204
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+ N M+ R + A + F PE D++SW T+I+G QNG +E + F MG
Sbjct: 205 VVYNTMITGLLRCRFIVEAEQLFDNMPE-KDSISWTTIITGLTQNGLFKEAVDKFKEMGI 263
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G ++ TF S L+AC G + K+IH+++++ N FV S ++D+YCKC N+ Y
Sbjct: 264 EGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKY 323
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
AE++ F + KNV+ WTA+ GY +
Sbjct: 324 AEAV-------------------------------FRKMRHKNVISWTAMLVGYGQNGYS 352
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
E + + E + D L ++ +CA A+L G + H L G+ + +
Sbjct: 353 EEAVRIFCDMQRNE-IHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNA 411
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
L+ +Y KCG++ +A +F RD V + +++ YA G + I LFE ML GI PD
Sbjct: 412 LITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPD 471
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
VTFV +LSA G VE G YF M +++I+P DHY CMIDL RA +LE+A F+
Sbjct: 472 GVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFI 531
Query: 553 KSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWA 612
+P DA+ + L+ CRLN N E+ A E L +LE N A Y+ L+++YAA+G W
Sbjct: 532 NQMPFSPDAIGWATLLSSCRLNGNLEIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWD 591
Query: 613 EMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
++ ++RK MR M + G SW+ ++++HIF+ D S P ++ IY+ L
Sbjct: 592 DVAKLRKGMREMGVKKEPGHSWIKYKNKVHIFSADDRSSPFSDQIYAKL 640
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 127/433 (29%), Positives = 215/433 (49%), Gaps = 5/433 (1%)
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE 188
T+ L C + N ++LH +++T + F ++LI+ Y K + A VF+ +
Sbjct: 9 TAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQ 68
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
NL S N +++A + G ++ + F P +D VSWN+L+SGY NG E ++++
Sbjct: 69 P-NLFSWNTLLSAYSKLGYLQDMQRVFDSMPN-HDVVSWNSLLSGYAGNGLISESVRVYN 126
Query: 249 RMGENG-VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
M ++G V N TF++ L V ++IH + K G S FV S +VD+Y K
Sbjct: 127 MMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKT 186
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
+N A + +N ++MI G + EA + FD++ EK+ + WT + +G
Sbjct: 187 GFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLT 246
Query: 368 KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDK 427
+ + D E + EG D +L AC AL GK+IHAYI+R Q +
Sbjct: 247 QNGLFKEAVDKFKE-MGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNI 305
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
+ S L+DMY KC N+ YAE +F+ ++++ + M+ Y +G+ E+A+ +F +M
Sbjct: 306 FVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRN 365
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEK 547
I PD T +++S+ + S+E G ++ A I T A +I LYG+ LE
Sbjct: 366 EIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNA-LITLYGKCGSLEH 424
Query: 548 AIEFMKSIPTEED 560
A + + ++
Sbjct: 425 AHQLFHEMKIRDE 437
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 132/267 (49%), Gaps = 22/267 (8%)
Query: 262 FASALSACCGLRNVKCAKEIHSWVLKNGLISNP--FVSSGIVDVYCKCENMNYAESMLLL 319
+ +AL CC RN K++H +++ ++NP F+ + +++ Y K ++ A ++
Sbjct: 8 YTAALKFCCEARNRAQVKKLHCRIIRT--LTNPETFLYNNLINTYGKLGDLKNARNVFDH 65
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLL 379
N FS ++++ YS G +++ +R FDS+ +VV W +L SGY A N L+
Sbjct: 66 IPQPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGY--AGN-----GLI 118
Query: 380 SEFVT------KEGVVT-DALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
SE V K+G V + + +L + + + G++IH I + G Q + S
Sbjct: 119 SESVRVYNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSP 178
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
LVDMY+K G + A IF+ E+++V+YN MI +A LF+ M EK D
Sbjct: 179 LVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEK----D 234
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSM 519
++++ I++ G + F M
Sbjct: 235 SISWTTIITGLTQNGLFKEAVDKFKEM 261
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L+E H QA+ +GL +N LI +Y K L + +LF EM R+ SW ++S
Sbjct: 386 SLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVS 445
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINA 100
+ + SLF++ +V G ++A
Sbjct: 446 GYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSA 481
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 229/668 (34%), Positives = 369/668 (55%), Gaps = 17/668 (2%)
Query: 13 HVQAIKAGLT-LTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHD 71
H + IK GL L TN L+++Y K ++ +LFDEMP + FSWNTI+SA K+ +
Sbjct: 35 HARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTILSAHAKAGN 94
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
L AR +FD P D V++ +M+ GY N G A+ F+ M S+ I +FT T+
Sbjct: 95 LDSARRVFDEIPQPDSVSWTTMIVGY-NHLGLFKSAVHAFLRMVSSG--ISPTQFTFTNV 151
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L C + G+++H+F+VK +SL++MY+KC A VF+ + +
Sbjct: 152 LASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLK-D 210
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM- 250
+ N M++ + + ++AL F + + D VSWN++I+GY G L+ F M
Sbjct: 211 TSTWNTMISMHMQFCQFDLALALFDQMTD-PDIVSWNSIITGYCHQGYDIRALETFSFML 269
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
+ ++ ++ T S LSAC ++K K+IH+ +++ + V + ++ +Y K +
Sbjct: 270 KSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAV 329
Query: 311 NYAESMLLLKGVR--NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
A ++ + G N + +S++ GY G+++ AR FDSL ++VV WTA+ GY
Sbjct: 330 EVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGY-- 387
Query: 369 AQN---CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
AQN +AL +L + +EG + L +L + A+L GK++HA +R+
Sbjct: 388 AQNGLISDAL--VLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVS 445
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFIE-RDLVLYNVMIACYAHHGHEEKAILLFEEM 484
+ + L+ MYS+ G++ A IF + RD + + MI A HG +AI LFE+M
Sbjct: 446 SVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKM 505
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
L +KPD +T+V +LSA H G VE G+ YFN M + I P + HYACMIDL GRA
Sbjct: 506 LRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGL 565
Query: 545 LEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANV 604
LE+A F++++P E D V GS L+ CR+++ +LA A EKLL ++ NN Y+ LAN
Sbjct: 566 LEEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLALANT 625
Query: 605 YAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIF 664
+A G W + ++RK M+ + G SWV +++++HIF V D HP+ +AIY +++
Sbjct: 626 LSACGKWEDAAKVRKSMKDKAVKKEQGFSWVQIKNKVHIFGVEDALHPQRDAIYCMISKI 685
Query: 665 TGELYEIA 672
E+ ++
Sbjct: 686 WKEIKKMG 693
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 218/672 (32%), Positives = 351/672 (52%), Gaps = 44/672 (6%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
NL A H + +K+ + T N L+ Y++ LR++R++FDE+P RN FS+N ++S
Sbjct: 32 NLSGARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLRNTFSYNALLS 91
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYI-NAEGYEADALKLFIEMQSADEHIRM 123
A + +AR+LF++ P D +YN+++ + G+ ADAL+ M + D +
Sbjct: 92 AYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAMHADD--FVL 149
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
+ ++ S L+ C + G Q+H + ++ + S+L+DMY+KC E+A RVF
Sbjct: 150 NAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVF 209
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
+ PE N VSWN+LI+ Y QNG E
Sbjct: 210 DA--------------------------------MPERN-VVSWNSLITCYEQNGPVGEA 236
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLK-NGLISNPFVSSGIVD 302
L LFV M G +E T +S +SAC GL + +++H+ ++K + L + +++ +VD
Sbjct: 237 LMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALVD 296
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
+Y KC A + R+ S +S++ GY+ N+E+A+ F + EKNV+ W L
Sbjct: 297 MYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNVL 356
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
+ Y + E L + + ++ + +L AC A L G++ H ++L+ G
Sbjct: 357 IAAYAQNGEEEEAIRLFVQ-LKRDSIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEG 415
Query: 423 VQMDKKLIS------TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
+ D S +LVDMY K G++ +F+ RD V +N MI YA +G +
Sbjct: 416 FRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKD 475
Query: 477 AILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMI 536
A+ LFE ML PD+VT + +LSA H G V+ G +YF+SMT D+ I+P DHY CM+
Sbjct: 476 ALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRYFHSMTEDHGITPSRDHYTCMV 535
Query: 537 DLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKA 596
DL GRA L++A E + +P E D+V+ S L CRL++N EL +L L+ N
Sbjct: 536 DLLGRAGHLKEAEELINDMPMEPDSVLWASLLGACRLHKNVELGEWTAGRLFELDPQNSG 595
Query: 597 RYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNA 656
YV L+N+YA G WAE+ R+R+ M+ ++ GCSW+ + ++++F D HP N
Sbjct: 596 PYVLLSNMYAEMGKWAEVFRVRRSMKDRGVSKQPGCSWIEIGRKMNVFLARDKRHPCRNE 655
Query: 657 IYSVLAIFTGEL 668
I++ L I E+
Sbjct: 656 IHNTLRIIQMEM 667
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 218/657 (33%), Positives = 350/657 (53%), Gaps = 35/657 (5%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
N +A H IK T N LI Y+K + + K+FD+MP N++SWNTI+S
Sbjct: 24 NFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNLYSWNTILS 83
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
A K + + LFD+ P +D V++NS++ GY G ++K + M D ++
Sbjct: 84 AYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGC-GLIYQSVKAYNLMLKNDGSFNLN 142
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
T ++ L L K V GRQ+H +VK + F S L+DMYSK A +VF+
Sbjct: 143 RITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFD 202
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
E+ N++ N ++ R G +E + + F+ E D++SW ++I+G+ QNG + +
Sbjct: 203 ELPEK-NVVMYNTLIMGLMRCGRVEDSKRLFFEMRE-RDSISWTSMITGFTQNGLDRDAI 260
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
+F M ++ +++TF S L+AC G+ ++ K++H+++++ N FV+S +VD+Y
Sbjct: 261 DIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMY 320
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
CKC+N+ AE++ F +T KNVV WTA+
Sbjct: 321 CKCKNIKSAEAV-------------------------------FKKMTCKNVVSWTAMLV 349
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
GY + E S+ + K G+ D L ++ +CA A+L G + HA L G+
Sbjct: 350 GYGQNGYSEEAVKTFSD-MQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLI 408
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
+ + LV +Y KCG++ + +F +D V + +++ YA G + I LFE M
Sbjct: 409 SFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESM 468
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
L G+KPD VTF+ +LSA G VE G + F SM ++ I P DHY CMIDL+ RA +
Sbjct: 469 LAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGR 528
Query: 545 LEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANV 604
+E+A F+ +P DA+ + L+ CR N ++ A E L+ L+ +N A YV L++V
Sbjct: 529 IEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSV 588
Query: 605 YAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
YAA+G W E+ R+RK MR + GCSW+ ++++H+F+ D S+P ++ IYS L
Sbjct: 589 YAAKGKWEEVARLRKDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSEL 645
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 126/436 (28%), Positives = 219/436 (50%), Gaps = 12/436 (2%)
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L LC + N + LH+ ++KT F +++LI Y+K AC+VF+ N
Sbjct: 16 LKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHP-N 74
Query: 192 LISKNAMVAACCREG---EMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
L S N +++A + G EME R+ D VSWN+LISGY G + +K +
Sbjct: 75 LYSWNTILSAYSKLGRVSEMEYLFDAMPRR----DGVSWNSLISGYAGCGLIYQSVKAYN 130
Query: 249 RMGENGVRWNEH--TFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
M +N +N + TF++ L VK ++IH V+K G +S FV S +VD+Y K
Sbjct: 131 LMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSK 190
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
++ A + +N +++I+G G +E+++R F + E++ + WT++ +G+
Sbjct: 191 MGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGF 250
Query: 367 VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMD 426
+ D+ E + E + D +L AC AL GK++HAYI+R + +
Sbjct: 251 TQNGLDRDAIDIFRE-MKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDN 309
Query: 427 KKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
+ S LVDMY KC N+ AE +F+ +++V + M+ Y +G+ E+A+ F +M +
Sbjct: 310 IFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQK 369
Query: 487 KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLE 546
GI+PD T +++S+ + S+E G ++ IS T A ++ LYG+ +E
Sbjct: 370 YGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNA-LVTLYGKCGSIE 428
Query: 547 KAIEFMKSIPTEEDAV 562
+ I +++
Sbjct: 429 DSHRLFNEISFKDEVT 444
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 121/250 (48%), Gaps = 11/250 (4%)
Query: 262 FASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKG 321
+ + L CC N AK +HS ++K F+ + ++ Y K ++ YA +
Sbjct: 12 YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMP 71
Query: 322 VRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSE 381
N +S ++++ YS G + E FD++ ++ V W +L SGY C ++ +
Sbjct: 72 HPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYA---GCGLIYQSVKA 128
Query: 382 F---VTKEGVVT-DALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMY 437
+ + +G + + LL + + + G++IH ++++ G + S LVDMY
Sbjct: 129 YNLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMY 188
Query: 438 SKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFV 497
SK G ++ A +F E+++V+YN +I G E + LF EM E+ D++++
Sbjct: 189 SKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRER----DSISWT 244
Query: 498 AILSAFRHCG 507
++++ F G
Sbjct: 245 SMITGFTQNG 254
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD 457
LL C K +H++I++ + L++ L+ Y+K G++ YA +F +
Sbjct: 15 LLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPN 74
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFN 517
L +N +++ Y+ G + LF+ M + D V++ +++S + CG + K +N
Sbjct: 75 LYSWNTILSAYSKLGRVSEMEYLFDAMPRR----DGVSWNSLISGYAGCGLIYQSVKAYN 130
Query: 518 SM 519
M
Sbjct: 131 LM 132
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 219/655 (33%), Positives = 348/655 (53%), Gaps = 44/655 (6%)
Query: 25 TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPH 84
T N L+ Y++ L ++R++FD MP RN FS+N ++SAC + A +LF + P
Sbjct: 50 TFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIPD 109
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
D +YN+++ + G DAL+ M AD+ + ++ ++ S L+ C G
Sbjct: 110 PDQCSYNAVVAA-LAQHGRGGDALRFLAAMH-ADDFV-LNAYSFASALSACASEKASRTG 166
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
Q+HA + K+S+ + + ++L+DMY+KC EEA +VF+ E N++S
Sbjct: 167 EQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPER-NIVS---------- 215
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFAS 264
W N+LI+ Y QNG +E L LFVRM ++G +E T AS
Sbjct: 216 -----------W-----------NSLITCYEQNGPVDEALALFVRMMKDGFVPDEVTLAS 253
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFV-SSGIVDVYCKCENMNYAESMLLLKGVR 323
+SAC GL + +++H+ ++K+ V ++ +VD+Y KC A+ + +R
Sbjct: 254 VMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIR 313
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV 383
+ S +SMI GY+ N+ +A+ F + EKNVV W L + Y E L +
Sbjct: 314 SVVSETSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVR-L 372
Query: 384 TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS------TLVDMY 437
+E V +L ACA A L G++ H ++L+ G + D S +LVDMY
Sbjct: 373 KRESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMY 432
Query: 438 SKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFV 497
K G+++ +F+ RD V +N MI YA +G + A+LLFE ML +PD+VT +
Sbjct: 433 LKTGSISDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSVTMI 492
Query: 498 AILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPT 557
+LSA H G V+ G +YF SMT D+ I P DHY CMIDL GRA L++ E ++++P
Sbjct: 493 GVLSACGHSGLVKEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIENMPM 552
Query: 558 EEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRI 617
E DAV+ S L CRL++N ++ A KL L+ +N YV L+N+YA G WA++ R+
Sbjct: 553 EPDAVLWASLLGACRLHKNIDMGEWAAGKLFELDPDNSGPYVLLSNMYAELGKWADVFRV 612
Query: 618 RKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
R+ M+ ++ GCSW+ + ++++F D HP N I+ L I ++ ++
Sbjct: 613 RRSMKHRGVSKQPGCSWIEIGRKVNVFLARDNIHPCRNEIHDTLRIIQMQMSRMS 667
>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
Length = 789
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/656 (32%), Positives = 352/656 (53%), Gaps = 37/656 (5%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
LK AL H A K + T ++ +Y K + ++K+F P ++F WN++I
Sbjct: 130 LKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYG 189
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
K +K+A LF P +D V++N+M+ ++ G+ A+ L F+EM ++ R +
Sbjct: 190 YSKYGSVKKALELFAKMPERDTVSWNTMI-SILSQHGFGAETLNTFLEMW--NQGFRPNS 246
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
T S L+ C + ++ +G LHA +V+ +A LIDMY+KC E A +VF+G
Sbjct: 247 MTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDG 306
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
TE ++AVSW +LI G Q G EE L
Sbjct: 307 LTE---------------------------------HNAVSWTSLIGGVAQAGFQEEALV 333
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
LF +M E V ++ T A+ L C +++ +++H+ + GL S+ V++ +V +Y
Sbjct: 334 LFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYA 393
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
KC ++ A L +R+ S ++MI +S G++E+AR +FD + E+NV+ W ++ +
Sbjct: 394 KCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLAT 453
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
Y++ E + + + +EGV TD + + ACA A L G +I A ++G
Sbjct: 454 YMQRGYWEEGLKVYIQML-REGVKTDWITFSTSISACADLAVLILGNQILAQAEKLGFSS 512
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
+ + +++V MYS+CG + A+ +F + + ++LV +N M+A YA +G K I +FE+ML
Sbjct: 513 NVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKML 572
Query: 486 EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQL 545
G PD +++V++LS H G V G+ YF SMT D+ ISP ++H+ CM+DL GRA QL
Sbjct: 573 NIGNVPDQISYVSVLSGCSHSGFVSEGQYYFLSMTKDHGISPMSEHFVCMVDLLGRAGQL 632
Query: 546 EKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVY 605
E+A + +P + +A I G+ L CR++ N +LA A + LL L+ Y LAN+Y
Sbjct: 633 EQAKNLINQMPFKPNAAIWGALLAACRIHGNTKLAELAVKNLLELDAEGPGSYCLLANIY 692
Query: 606 AAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+ G + +RK MR + GCSW+ V++ +H+FTV D +HP+ ++ +L
Sbjct: 693 SESGKIQGVTNVRKLMRDKGVRKNPGCSWIEVDNRVHVFTVDDTNHPQIKDVHRML 748
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 159/587 (27%), Positives = 263/587 (44%), Gaps = 95/587 (16%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
+RS+ + L H Q I GL + N L+++YS L+ ++ ++F + NV+SWN
Sbjct: 17 LRSIPIARKL--HAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNVYSWN 74
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
T+IS S +++A LF+ P +D V++NSM+ GY + EA
Sbjct: 75 TMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEA--------------- 119
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
T+ L + QLH F K +S++DMY KC + A
Sbjct: 120 ----------TIKASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQ 169
Query: 181 RVFEGC-TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
+VF C T +L N+M+ + G ++ AL+ F + PE D VSWNT+IS Q+G
Sbjct: 170 KVF--CRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPE-RDTVSWNTMISILSQHGF 226
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
E L F+ M G R N T+AS LSAC + +++ +H+ +++ + + G
Sbjct: 227 GAETLNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCG 286
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
++D+Y KC G +E AR+ FD LTE N V W
Sbjct: 287 LIDMYAKC-------------------------------GRLESARQVFDGLTEHNAVSW 315
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
T+L G +A E L ++ + + V +D L +LG C Q + G+++HA+ +
Sbjct: 316 TSLIGGVAQAGFQEEALVLFNQ-MREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTI 374
Query: 420 RMGVQMDKKLISTLVDMYSKCGN----------MTYAEII-------------------- 449
G+ + + LV MY+KCG+ M +II
Sbjct: 375 TRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKARE 434
Query: 450 -FQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGS 508
F ER+++ +N M+A Y G+ E+ + ++ +ML +G+K D +TF +SA
Sbjct: 435 YFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISACADLAV 494
Query: 509 VEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSI 555
+ +G + + S ++ +Y R Q+E+A + SI
Sbjct: 495 LILGNQIL-AQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSI 540
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 125/490 (25%), Positives = 219/490 (44%), Gaps = 36/490 (7%)
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
C L ++ R+LHA ++ +S F + L++MYS C +A RVF G N+ S
Sbjct: 14 CASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFP-NVYS 72
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
N M++ G+M A K F + PE D+VSWN+++SGY NG+ E +K
Sbjct: 73 WNTMISGFADSGQMREAEKLFEKMPE-RDSVSWNSMMSGYFHNGELEATIK--------- 122
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
A L +K A ++H + K + V + ++D+Y KC M++A+
Sbjct: 123 -------------ASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQ 169
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN--- 371
+ + F +SMI GYS G++++A F + E++ V W + S + +Q+
Sbjct: 170 KVFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMIS--ILSQHGFG 227
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
E L L + +G +++ +L AC L G +HA I+RM +D
Sbjct: 228 AETLNTFLEMW--NQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGC 285
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
L+DMY+KCG + A +F E + V + +I A G +E+A++LF +M E +
Sbjct: 286 GLIDMYAKCGRLESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVAS 345
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
D T +L + +GE+ ++ T + ++ +Y + + KA
Sbjct: 346 DQFTLATVLGVCLSQKDISIGEQ-LHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHA 404
Query: 552 MKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNW 611
+ +P D + + + + E +A E ++ N + + Y G W
Sbjct: 405 FELMPI-RDIISWTAMITAFSQAGDVE---KAREYFDKMPERNVISWNSMLATYMQRGYW 460
Query: 612 AEMGRIRKQM 621
E ++ QM
Sbjct: 461 EEGLKVYIQM 470
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Brachypodium distachyon]
Length = 1430
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 233/677 (34%), Positives = 351/677 (51%), Gaps = 48/677 (7%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
NL A H +A+K+ T N L+ Y++ L ++R++FDE+P N FS+N ++S
Sbjct: 775 NLPAARAAHARALKSPFVAETFLLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLS 834
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
A + AR+LF + P D +YN+++ + ADAL LF+ AD+ + ++
Sbjct: 835 AHARLGRPADARALFHAIPDPDQCSYNAVIAA-LAQHSRGADAL-LFLAAMHADDFV-LN 891
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
++ S L+ C + G Q+HA + K+ + + S+L+DMY+KC EEA RVFE
Sbjct: 892 AYSFASALSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFE 951
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
PE N VSWN+LI+ Y QNG E L
Sbjct: 952 A--------------------------------MPERN-IVSWNSLITCYEQNGPVGEAL 978
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFV-SSGIVDV 303
LFV M + G +E T AS +SAC GL + +++H+ V+K+ V S+ +VD+
Sbjct: 979 VLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFREDMVLSNALVDM 1038
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y KC A + R+ S +S+I GY+ N+E+A+ F + EKNV+ W L
Sbjct: 1039 YAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVEDAQMVFSQMVEKNVIAWNVLI 1098
Query: 364 SGYVKAQNCEALFDLLSEFV--TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+ Y AQN E + L FV +E V +L AC A L G++ H ++L+
Sbjct: 1099 AAY--AQNGEEE-EALRLFVRLKRESVWPTHYTYGNVLNACGNVADLQLGQQAHVHVLKE 1155
Query: 422 GVQMDKKLIS------TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEE 475
G + D S +LVDMY K G++ +F+ RD V +N MI +A +G +
Sbjct: 1156 GFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGHAQNGRAK 1215
Query: 476 KAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACM 535
A+ LFE ML PD+VT + +LSA H G VE G +YF SMT D+ I P DHY CM
Sbjct: 1216 DALHLFERMLCSKESPDSVTMIGVLSACGHSGLVEEGRRYFRSMTEDHGIIPSQDHYTCM 1275
Query: 536 IDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNK 595
IDL GRA L++ E +K + E DAV+ S L CRL++N E+ A KL L+ N
Sbjct: 1276 IDLLGRAGHLKEVEELIKEMSMEPDAVLWASLLGSCRLHKNVEMGEWAAGKLFELDPRNS 1335
Query: 596 ARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTN 655
YV L+N+YA G WA++ R+R M+ ++ GCSW+ + ++ +F D HP N
Sbjct: 1336 GPYVLLSNMYAELGKWADVFRVRSSMKHRGVSKQPGCSWIEIGRKVSVFLARDNGHPCKN 1395
Query: 656 AIYSVLAIFTGELYEIA 672
I+++L I ++ ++
Sbjct: 1396 EIHAILRIIQMQMSRVS 1412
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 170/582 (29%), Positives = 274/582 (47%), Gaps = 72/582 (12%)
Query: 4 LNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
L+L A H K I L+ +Y LL ++R+ FD++ E N SWN I+
Sbjct: 165 LDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRAFDDILEPNAISWNVIV 224
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
+ H L M A+ +F M SA +R
Sbjct: 225 R---RYH----------------LAGMGDM-------------AVDMFFRMLSAG--VRP 250
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
+TV+ + C + GR +HAF+++ + SS++DMY+KC + A +F
Sbjct: 251 LGYTVSHAVLACRDNNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLF 310
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
+ +++ ++V+ G + A + F E N VSWN +++GY+++ D
Sbjct: 311 NLAPMK-DMVMSTSIVSGLASCGRIADAKRVFEGMKERN-LVSWNAMLTGYIRSMDLTGA 368
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
L LF +M + ++ T S LSAC G+ ++ +E+H++ +K G S+P + + +V +
Sbjct: 369 LLLFQQMRQETREFDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRM 428
Query: 304 YCKCENMNYAESMLLLK--GVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
Y KC + AE +LL + R+S+S +S+I GY RH S++E A
Sbjct: 429 YSKCGCLRSAERLLLFEMGSERDSYSWNSLISGY---------ERH--SMSE------AA 471
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
L+ AL + SE + + AL ACA L G +IHAY++R
Sbjct: 472 LY----------ALTKMQSEVTPNQSTFSSAL------AACANIFLLKQGMQIHAYMIRK 515
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
G ++D L S L+DMY KC Y+ IF+ RD++L+N MI A+ G E + LF
Sbjct: 516 GYEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYSGKGEYGLDLF 575
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGR 541
+EM ++GIK D+VTF+ L + G V +G YF M D I P +HY CMI+L G+
Sbjct: 576 DEMQKQGIKADSVTFLGALVSCISEGHVRLGRSYFTLMM-DESIIPRIEHYECMIELLGK 634
Query: 542 ANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEA 583
+ + +F++ +P E + + CR N +L A
Sbjct: 635 HGCMVELEDFVEHMPFEPTTAMWLRIFDCCREYGNRKLGERA 676
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 138/527 (26%), Positives = 253/527 (48%), Gaps = 46/527 (8%)
Query: 56 VFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQ 115
F +N I + + AR LFD P +D ++N+++ A G+ ++AL LF M
Sbjct: 85 TFLFNRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRA-GHPSEALSLFSNMN 143
Query: 116 SADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRC 175
S IR + T+ S L+ C + L++ RQLH + K ++ ++L+D+Y C
Sbjct: 144 SLG--IRPKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFL 201
Query: 176 YEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYV 235
+A R F+ E +A+SWN ++ Y
Sbjct: 202 LADARRAFDDILEP---------------------------------NAISWNVIVRRYH 228
Query: 236 QNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF 295
G + + +F RM GVR +T + A+ AC ++ + IH++VL++G +
Sbjct: 229 LAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNALEEGRCIHAFVLRHGYEHHVH 288
Query: 296 VSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKN 355
V S +VD+Y KC M+ A+S+ L +++ +S++ G + G + +A+R F+ + E+N
Sbjct: 289 VRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGRIADAKRVFEGMKERN 348
Query: 356 VVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIH 415
+V W A+ +GY+++ + LL + + +E DA+ L +L AC + G+E+H
Sbjct: 349 LVSWNAMLTGYIRSMDLTGAL-LLFQQMRQETREFDAITLGSVLSACTGILDIGKGEEVH 407
Query: 416 AYILRMGVQMDKKLISTLVDMYSKCGNMTYAE--IIFQNFIERDLVLYNVMIACYAHHGH 473
A+ ++ G L + LV MYSKCG + AE ++F+ ERD +N +I+ Y H
Sbjct: 408 AFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSM 467
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY- 532
E A+ +M + + P+ TF + L+A C ++ + ++ + E D
Sbjct: 468 SEAALYALTKM-QSEVTPNQSTFSSALAA---CANIFLLKQGMQIHAYMIRKGYEIDDIL 523
Query: 533 -ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAE 578
+ +ID+Y + Q + +I ++ P+ D ++ S + C + E
Sbjct: 524 RSVLIDMYCKCRQFDYSIRIFEARPS-RDVILWNSMIFGCAYSGKGE 569
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 116/521 (22%), Positives = 206/521 (39%), Gaps = 65/521 (12%)
Query: 78 LFDSSPHKDLVTYNSML--CGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLC 135
+F++ P +D++ +NSM+ C Y Y L LF EMQ + I+ D T L C
Sbjct: 543 IFEARPSRDVILWNSMIFGCAYSGKGEY---GLDLFDEMQK--QGIKADSVTFLGALVSC 597
Query: 136 VKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISK 195
+ +V GR M+ S +I++ K C E E E +
Sbjct: 598 ISEGHVRLGRSYFTLMMDESIIPRIEHYECMIELLGKHGCMVE----LEDFVEHMPFEPT 653
Query: 196 NAM---VAACCRE-GEMEMALKTFWRQPELNDA-----VSWNTLISGYVQNGDAEEGLKL 246
AM + CCRE G ++ + +ND+ V + + +G E
Sbjct: 654 TAMWLRIFDCCREYGNRKLGERA---AKCINDSNPLTPVQFVATVDYESNDGGREAESTS 710
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSW-----VLKNGLISNPFVSSGIV 301
F GE E F+ A L + + W + +S+ S+ +
Sbjct: 711 FSSEGEG---CEELPFSLEGEASGSLPAPLTTRPLAIWYGMARHHHHHFVSHLRASAPLA 767
Query: 302 DVYCKCENMNYAESM----LLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVV 357
D+ N+ A + L V +F +++++ Y+ G + +ARR FD + N
Sbjct: 768 DLLRSAPNLPAARAAHARALKSPFVAETFLLNTLVSAYARLGRLPDARRVFDEIPHPNTF 827
Query: 358 VWTALFSGYVK---AQNCEALFDLLSE-----------FVTKEGVVTDALILVIL----- 398
+ AL S + + + ALF + + + + DAL+ +
Sbjct: 828 SYNALLSAHARLGRPADARALFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAAMHADD 887
Query: 399 -----------LGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAE 447
L ACA + G ++HA + + D + S L+DMY+KC A
Sbjct: 888 FVLNAYSFASALSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEAR 947
Query: 448 IIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCG 507
+F+ ER++V +N +I CY +G +A++LF M++ G PD VT +++SA
Sbjct: 948 RVFEAMPERNIVSWNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLA 1007
Query: 508 SVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
+ G + + + + ++D+Y + + A
Sbjct: 1008 ADREGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAA 1048
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 206/599 (34%), Positives = 335/599 (55%), Gaps = 10/599 (1%)
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFT 127
KS L AR +F P +D V++ M+ G +N G +A+K ++M + + +FT
Sbjct: 4 KSGRLADARGVFAEMPERDAVSWTVMVVG-LNRAGRFGEAIKTLLDMTA--DGFTPTQFT 60
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
+T+ L+ C GR++H+F+VK + +S+++MY KC E A VFE
Sbjct: 61 LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
++ S NAMV+ G M++A F P+ VSWN +I+GY QNG + LKLF
Sbjct: 121 VR-SVSSWNAMVSLNTHLGRMDLAESLFESMPD-RSIVSWNAMIAGYNQNGLDAKALKLF 178
Query: 248 VRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
RM E+ + +E T S LSAC L NV+ K++H+++L+ + N V++ ++ Y K
Sbjct: 179 SRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAK 238
Query: 307 CENMNYAESML--LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
++ A ++ ++ N S ++++ GY G+ME AR F + ++VV WTA+
Sbjct: 239 SGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIV 298
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
GY + + DL +T G ++ L +L CA A L GK+IH +R ++
Sbjct: 299 GYEQNGRNDEAIDLFRSMITC-GPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLE 357
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIER-DLVLYNVMIACYAHHGHEEKAILLFEE 483
+ + ++ MY++ G+ +A +F R + + + MI A HG E+A+ LFEE
Sbjct: 358 QSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEE 417
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRAN 543
ML G++PD +T+V +LSA H G V G++Y++ + +++I+PE HYACM+DL RA
Sbjct: 418 MLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAG 477
Query: 544 QLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLAN 603
+A EF++ +P E DA+ GS L+ CR+++NAELA A EKLL ++ NN Y +AN
Sbjct: 478 LFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIAN 537
Query: 604 VYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLA 662
VY+A G W++ RI K + + G SW ++ +IH+F DV HP+ +A+Y++ A
Sbjct: 538 VYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAA 596
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 140/500 (28%), Positives = 237/500 (47%), Gaps = 42/500 (8%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K GL N ++++Y K + +F+ MP R+V SWN ++S +
Sbjct: 81 HSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRM 140
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
A SLF+S P + +V++N+M+ GY N G +A ALKLF M + + DEFT+TS L
Sbjct: 141 DLAESLFESMPDRSIVSWNAMIAGY-NQNGLDAKALKLFSRMLH-ESSMAPDEFTITSVL 198
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE-EVN 191
+ C L NV G+Q+HA++++T + ++LI Y+K E A R+ + E ++N
Sbjct: 199 SACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLN 258
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
+IS A++ + G+ME A + F D V+W +I GY QNG +E + LF M
Sbjct: 259 VISFTALLEGYVKIGDMESAREMFGVMNN-RDVVAWTAMIVGYEQNGRNDEAIDLFRSMI 317
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
G N +T A+ LS C L + K+IH +++ L + VS+ I+ +Y +
Sbjct: 318 TCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYAR----- 372
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT-EKNVVVWTALFSGYVKAQ 370
G+ ARR FD + K + WT++ +
Sbjct: 373 --------------------------SGSFPWARRMFDQVCWRKETITWTSMIVALAQHG 406
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL-RMGVQMDKKL 429
E L E + + GV D + V +L AC+ ++ GK + I + +
Sbjct: 407 QGEEAVGLFEEML-RAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSH 465
Query: 430 ISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
+ +VD+ ++ G + A E I + +E D + + +++ H + E A L E++L
Sbjct: 466 YACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLS-- 523
Query: 489 IKP-DAVTFVAILSAFRHCG 507
I P ++ + AI + + CG
Sbjct: 524 IDPNNSGAYSAIANVYSACG 543
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 129/268 (48%), Gaps = 37/268 (13%)
Query: 335 YSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN-CEALFDLLSEFVTKEGVVTDAL 393
++ G + +AR F + E++ V WT + G +A EA+ LL +T +G
Sbjct: 2 FAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLD--MTADGFTPTQF 59
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGN----------- 442
L +L +CA+ A G+++H++++++G+ + +++++MY KCG+
Sbjct: 60 TLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERM 119
Query: 443 --------------------MTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
M AE +F++ +R +V +N MIA Y +G + KA+ LF
Sbjct: 120 PVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFS 179
Query: 483 EML-EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGR 541
ML E + PD T ++LSA + G+V +G K ++ +++ + +I Y +
Sbjct: 180 RMLHESSMAPDEFTITSVLSACANLGNVRIG-KQVHAYILRTEMAYNSQVTNALISTYAK 238
Query: 542 ANQLEKAIEFM-KSIPTEEDAVILGSFL 568
+ +E A M +S+ T+ + + + L
Sbjct: 239 SGSVENARRIMDQSMETDLNVISFTALL 266
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 214/672 (31%), Positives = 348/672 (51%), Gaps = 44/672 (6%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L A H +K+ + T N L+ Y++ LRE+R++FD +P RN FS+N ++S
Sbjct: 32 SLPGARAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPLRNTFSYNALLS 91
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYI-NAEGYEADALKLFIEMQSADEHIRM 123
A + +AR+LF++ P D +YN+++ + G+ DAL+ M + D +
Sbjct: 92 AYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADD--FVL 149
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
+ ++ S L+ C ++ G Q+H + ++ + ++L+DMY+KC +A RVF
Sbjct: 150 NAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVF 209
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
+ PE N VSWN+LI+ Y QNG E
Sbjct: 210 DA--------------------------------MPERN-VVSWNSLITCYEQNGPVGEA 236
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFV-SSGIVD 302
L LFV M G +E T +S +SAC GL + +++H+ ++K + + V ++ +VD
Sbjct: 237 LVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVD 296
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
+Y KC A + R+ S +S++ GY+ N+E+A+ F + EKNV+ W L
Sbjct: 297 MYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVL 356
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
+ Y + E L + + ++ + +L AC A L G++ H ++L+ G
Sbjct: 357 IAAYAQNGEEEEAIRLFVQ-LKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEG 415
Query: 423 VQMDKKLIS------TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
+ D S +LVDMY K G++ +F+ RD V +N MI YA +G +
Sbjct: 416 FRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKD 475
Query: 477 AILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMI 536
A+ LFE ML PD+VT + +LSA H G V+ G ++F+ MT D+ I+P DHY CM+
Sbjct: 476 ALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMV 535
Query: 537 DLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKA 596
DL GRA L++A E +K +PTE D+V+ S L CRL++N EL +L L+ N
Sbjct: 536 DLLGRAGHLKEAEELIKDMPTEPDSVLWASLLGACRLHKNVELGERTAGRLFELDPENSG 595
Query: 597 RYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNA 656
YV L+N+YA G WA++ R+R+ M+ ++ GCSW+ + ++++F D HP N
Sbjct: 596 PYVLLSNMYAEMGKWADVFRVRRSMKDRGVSKQPGCSWIEIGSKMNVFLARDNRHPCRNE 655
Query: 657 IYSVLAIFTGEL 668
I+S L I E+
Sbjct: 656 IHSTLRIIQMEM 667
>gi|296087629|emb|CBI34885.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 210/644 (32%), Positives = 360/644 (55%), Gaps = 7/644 (1%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
+ +N +I Y + L ++R LFDEMPERN SW+ +IS +K ++++ F+ +P +
Sbjct: 88 VVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNPFQ 147
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR 145
++V++ + + G++ G +ALKLF + + +R ++ T TS + C +L + G G
Sbjct: 148 NVVSWTAAISGFVR-NGLNFEALKLFFRL--LESGVRPNDVTFTSVVRACGELGDFGLGM 204
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
+ +VK + +SLI + + + A RVF+ E+ +++S A++ A
Sbjct: 205 SILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDR-MEKRDVVSWTAILDAYVET 263
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASA 265
G++ A + F PE N+ +SW+ +I+ Y Q+G AEE LKLF +M + G + N FA
Sbjct: 264 GDLREARRIFDEMPERNE-ISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACT 322
Query: 266 LSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNS 325
LSA LR + IH V K G+ + F+ S ++D+YCKC + + L +N
Sbjct: 323 LSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNV 382
Query: 326 FSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTK 385
+SM+ GYS+ G +EE F+ + EKN V W + +GY++ + CE + ++ + +
Sbjct: 383 VCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLV- 441
Query: 386 EGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTY 445
G + +L ACA A+L G +H I+++G+Q D + + L DMY+KCG++
Sbjct: 442 SGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGS 501
Query: 446 AEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG-IKPDAVTFVAILSAFR 504
++ +F+ E++ + + VMI A G ++++LFEEM + P+ + +++L A
Sbjct: 502 SKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACS 561
Query: 505 HCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVIL 564
HCG V+ G YFNSM Y I P+ HY C++DL R+ +L +A EF+++IP + +A
Sbjct: 562 HCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAW 621
Query: 565 GSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGM 624
+ L+ C+ ++ ++A +KL +L NN A YV L+N+YA+ G W ++ IRK MR
Sbjct: 622 AALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREK 681
Query: 625 KGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
+ GCSWV V +++H F D SH ++N IY L + E+
Sbjct: 682 GLKKSGGCSWVEVRNQVHSFYSEDGSHSQSNEIYGTLQLLRSEM 725
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 210/432 (48%), Gaps = 37/432 (8%)
Query: 17 IKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQAR 76
+KAG +N LI + + + +R++FD M +R+V SW I+ A +++ DL++AR
Sbjct: 211 VKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREAR 270
Query: 77 SLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCV 136
+FD P ++ +++++M+ Y + GY +ALKLF +M E + + TL+
Sbjct: 271 RIFDEMPERNEISWSAMIARY-SQSGYAEEALKLFSKM--VQEGFKPNISCFACTLSALA 327
Query: 137 KLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKN 196
L + G +H + K D F SSLID+Y KC ++ VF+ E+ N++ N
Sbjct: 328 SLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEK-NVVCWN 386
Query: 197 AMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVR 256
+MV G +E + F PE ND VSW T+I+GY++N E+ L++F + +G
Sbjct: 387 SMVGGYSINGRLEETEELFELIPEKND-VSWGTIIAGYLENEQCEKVLEVFNTLLVSGQT 445
Query: 257 WNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESM 316
N+ TF+S L AC + ++ +H ++K G+ + FV + + D+Y KC
Sbjct: 446 PNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKC--------- 496
Query: 317 LLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALF 376
G++ +++ F+ + EKN + WT + G ++
Sbjct: 497 ----------------------GDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESL 534
Query: 377 DLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM-GVQMDKKLISTLVD 435
L E V + L+L+ +L AC+ + G + ++ G++ K + +VD
Sbjct: 535 ILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVD 594
Query: 436 MYSKCGNMTYAE 447
+ S+ G + AE
Sbjct: 595 LLSRSGRLYEAE 606
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 125/496 (25%), Positives = 219/496 (44%), Gaps = 75/496 (15%)
Query: 135 CVKLL----NVGF---GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV---FE 184
CV LL N G G LHA ++KT + + L+ +Y CR + E ++ F+
Sbjct: 24 CVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFD 83
Query: 185 GCT---------------------------EEVNLISKNAMVAACCREGEMEMALKTFWR 217
G E N +S +A+++ + G +E ++ F R
Sbjct: 84 GSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFER 143
Query: 218 QPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKC 277
P + VSW ISG+V+NG E LKLF R+ E+GVR N+ TF S + AC L +
Sbjct: 144 NP-FQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGL 202
Query: 278 AKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSL 337
I V+K G VS+ ++ + + ++ A + R+ S ++++ Y
Sbjct: 203 GMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVE 262
Query: 338 QGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVI 397
G++ EARR FD + E+N + W+A+ + Y ++ E L S+ V +EG +
Sbjct: 263 TGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMV-QEGFKPNISCFAC 321
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD 457
L A A AL G IH ++ ++G+ D + S+L+D+Y KCG ++F +E++
Sbjct: 322 TLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKN 381
Query: 458 LVLYNVMIACYAHHGHE-------------------------------EKAILLFEEMLE 486
+V +N M+ Y+ +G EK + +F +L
Sbjct: 382 VVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLV 441
Query: 487 KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY--ACMIDLYGRANQ 544
G P+ TF ++L A C S+ +K N K+ + D + + D+Y +
Sbjct: 442 SGQTPNKSTFSSVLCA---CASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGD 498
Query: 545 LEKAIEFMKSIPTEED 560
+ + + + +P + +
Sbjct: 499 IGSSKQVFERMPEKNE 514
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 117/270 (43%), Gaps = 39/270 (14%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L + H K G+ + LI +Y K + R +FD + E+NV WN+++
Sbjct: 332 LSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGG 391
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
+ L++ LF+ P K+ V++ +++ GY+ E E L++F + + + ++
Sbjct: 392 YSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCE-KVLEVFNTLLVSGQ--TPNK 448
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
T +S L C + ++ G +H ++K F ++L DMY+KC
Sbjct: 449 STFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKC------------ 496
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
G++ + + F R PE N+ +SW +I G ++G A E L
Sbjct: 497 --------------------GDIGSSKQVFERMPEKNE-ISWTVMIQGLAESGFAVESLI 535
Query: 246 LFVRMGENG-VRWNEHTFASALSAC--CGL 272
LF M V NE S L AC CGL
Sbjct: 536 LFEEMERTSEVAPNELMLLSVLFACSHCGL 565
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 42/90 (46%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L + + H + IK G+ L +Y+K + S+++F+ MPE+N SW +I
Sbjct: 463 SLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQ 522
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSML 94
+S ++ LF+ V N ++
Sbjct: 523 GLAESGFAVESLILFEEMERTSEVAPNELM 552
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 207/650 (31%), Positives = 347/650 (53%), Gaps = 38/650 (5%)
Query: 12 CHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHD 71
CH+ IKA N L+ Y+K + + +R++FD+MP+RN++SWNT++S+ K
Sbjct: 33 CHI--IKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSYSKLAC 90
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
L + +F + P +D+V++NS++ Y G+ ++K + + + ++ +++
Sbjct: 91 LPEMERVFHAMPTRDMVSWNSLISAYA-GRGFLLQSVKAY-NLMLYNGPFNLNRIALSTM 148
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L L K V G Q+H +VK + F S L+DMYSK A + F+ E+ N
Sbjct: 149 LILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEK-N 207
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
++ N ++A R +E + + F+ E D++SW +I+G+ QNG E + LF M
Sbjct: 208 VVMYNTLIAGLMRCSRIEDSRQLFYDMQE-KDSISWTAMIAGFTQNGLDREAIDLFREMR 266
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
+ +++TF S L+AC G+ ++ K++H+++++ N FV S +VD+YCKC+++
Sbjct: 267 LENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIK 326
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
AE++ F + KNVV WTA+ GY +
Sbjct: 327 SAETV-------------------------------FRKMNCKNVVSWTAMLVGYGQNGY 355
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
E + + + G+ D L ++ +CA A+L G + H L G+ + +
Sbjct: 356 SEEAVKIFCD-MQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSN 414
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
LV +Y KCG++ + +F D V + +++ YA G + + LFE ML G KP
Sbjct: 415 ALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKP 474
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
D VTF+ +LSA G V+ G + F SM +++I P DHY CMIDL+ RA +LE+A +F
Sbjct: 475 DKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKF 534
Query: 552 MKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNW 611
+ +P DA+ S L+ CR +RN E+ A E LL+LE +N A Y+ L+++YAA+G W
Sbjct: 535 INKMPFSPDAIGWASLLSSCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKW 594
Query: 612 AEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
E+ +RK MR + GCSW+ ++++HIF+ D S+P ++ IYS L
Sbjct: 595 EEVANLRKGMRDKGLRKEPGCSWIKYKNQVHIFSADDQSNPFSDQIYSEL 644
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 196/405 (48%), Gaps = 5/405 (1%)
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
+++H ++K + F +++L+ Y+K A RVF+ + NL S N ++++ +
Sbjct: 29 KKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQR-NLYSWNTLLSSYSK 87
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG-VRWNEHTFA 263
+ + F P D VSWN+LIS Y G + +K + M NG N +
Sbjct: 88 LACLPEMERVFHAMPT-RDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALS 146
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
+ L V ++H V+K G S FV S +VD+Y K + A +
Sbjct: 147 TMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEK 206
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV 383
N +++I G +E++R+ F + EK+ + WTA+ +G+ + DL E +
Sbjct: 207 NVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFRE-M 265
Query: 384 TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNM 443
E + D +L AC AL GK++HAYI+R Q + + S LVDMY KC ++
Sbjct: 266 RLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSI 325
Query: 444 TYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAF 503
AE +F+ +++V + M+ Y +G+ E+A+ +F +M GI+PD T +++S+
Sbjct: 326 KSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSC 385
Query: 504 RHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
+ S+E G ++ IS T A ++ LYG+ +E +
Sbjct: 386 ANLASLEEGAQFHCRALVSGLISFITVSNA-LVTLYGKCGSIEDS 429
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 123/547 (22%), Positives = 220/547 (40%), Gaps = 136/547 (24%)
Query: 10 LICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKS 69
+ C QA + N LI + + + +SR+LF +M E++ SW +I+
Sbjct: 193 VFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAG---- 248
Query: 70 HDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVT 129
G + +A+ LF EM+ E++ MD++T
Sbjct: 249 ----------------------------FTQNGLDREAIDLFREMRL--ENLEMDQYTFG 278
Query: 130 STLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEE 189
S L C ++ + G+Q+HA++++T + F S+L+DMY KC+ + A
Sbjct: 279 SVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSA---------- 328
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
+T +R+ + VSW ++ GY QNG +EE +K+F
Sbjct: 329 -----------------------ETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCD 365
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
M NG+ ++ T S +S+C L +++ + H L +GLIS VS+ +V +Y KC
Sbjct: 366 MQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKC-- 423
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
G++E++ R F ++ + V WTAL SGY +
Sbjct: 424 -----------------------------GSIEDSHRLFSEMSYVDEVSWTALVSGYAQF 454
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
L E + G D + + +L AC+ + G +I +++ + ++
Sbjct: 455 GKANETLRLF-ESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIK-----EHRI 508
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
I IE Y MI ++ G E+A +M
Sbjct: 509 IP----------------------IEDH---YTCMIDLFSRAGRLEEARKFINKM---PF 540
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE-TDHYACMIDLYGRANQLEKA 548
PDA+ + ++LS+ R ++E+G+ S+ K+ P T Y + +Y + E+
Sbjct: 541 SPDAIGWASLLSSCRFHRNMEIGKWAAESLL---KLEPHNTASYILLSSIYAAKGKWEEV 597
Query: 549 IEFMKSI 555
K +
Sbjct: 598 ANLRKGM 604
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 119/250 (47%), Gaps = 26/250 (10%)
Query: 269 CCGLRNVKCAKEIHSWVLKNGLISNP--FVSSGIVDVYCKCENMNYAESMLLLKGVRNSF 326
C L++ + K+IH ++K NP F+ + +V Y K + + YA + RN +
Sbjct: 19 CELLKHCRDTKKIHCHIIK--AFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLY 76
Query: 327 SISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY---------VKAQNCEALFD 377
S ++++ YS + E R F ++ +++V W +L S Y VKA N L
Sbjct: 77 SWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYN---LML 133
Query: 378 LLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMY 437
F ++ LIL + Q +H G ++H ++++ G Q + S LVDMY
Sbjct: 134 YNGPFNLNRIALSTMLILA------SKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMY 187
Query: 438 SKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFV 497
SK G + A F E+++V+YN +IA E + LF +M EK D++++
Sbjct: 188 SKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEK----DSISWT 243
Query: 498 AILSAFRHCG 507
A+++ F G
Sbjct: 244 AMIAGFTQNG 253
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 121/312 (38%), Gaps = 56/312 (17%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L+E H +A+ +GL +N L+ +Y K + +S +LF EM + SW ++S
Sbjct: 390 SLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVS 449
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
+ + LF+ SML A G++ D +
Sbjct: 450 GYAQFGKANETLRLFE-----------SML-----AHGFKPDKV---------------- 477
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDAS-GFAVSSLIDMYSKCRCYEEACRVF 183
T L+ C + V G Q+ M+K + +ID++S+ EEA +
Sbjct: 478 --TFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFI 535
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEM---ALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+ I +++++C ME+ A ++ + E ++ S+ L S Y G
Sbjct: 536 NKMPFSPDAIGWASLLSSCRFHRNMEIGKWAAESLLKL-EPHNTASYILLSSIYAAKGKW 594
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
EE L M + G+R G +K ++H + + SNPF
Sbjct: 595 EEVANLRKGMRDKGLRKEP-----------GCSWIKYKNQVHIFSADDQ--SNPFSDQ-- 639
Query: 301 VDVYCKCENMNY 312
+Y + E +NY
Sbjct: 640 --IYSELEKLNY 649
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 365 bits (936), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 215/639 (33%), Positives = 343/639 (53%), Gaps = 55/639 (8%)
Query: 24 TTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP 83
++I+ N +I ++ +R+LF++MP R++ SWN +IS C++ +L+ AR LFD P
Sbjct: 79 SSISWNAMISGCLSNDKFYLARQLFEKMPTRDLVSWNVMISGCVRYRNLRAARLLFDQMP 138
Query: 84 HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGF 143
+D+V++N+ML GY GY +A ++F EM +
Sbjct: 139 ERDVVSWNAMLSGYAQ-NGYVKEAKEIFDEMPCKNS------------------------ 173
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
+ + ++ Y + E+A R+FE + LIS N M+
Sbjct: 174 -----------------ISWNGMLAAYVQNGRIEDARRLFE-SKADWELISWNCMMGGYV 215
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
+ + A F R PE D VSWNT+ISGY QNG+ E +LF E+ VR + T+
Sbjct: 216 KRNRLVDARGIFDRMPE-RDEVSWNTMISGYAQNGELLEAQRLFE---ESPVR-DVFTWT 270
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVS-SGIVDVYCKCENMNYAESMLLLKGV 322
+ +S + A+ + +G+ VS + I+ Y +C+ M+ A +
Sbjct: 271 AMVSGYVQNGMLDEARRVF-----DGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPC 325
Query: 323 RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF 382
+N S ++MI GY+ G++ +AR FD + +++ + W A+ +GY ++ E L E
Sbjct: 326 QNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVE- 384
Query: 383 VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGN 442
+ ++G + L CA AAL GK++H +++ G++ + + L+ MY KCGN
Sbjct: 385 MKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGN 444
Query: 443 MTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
+ A I+F+ E+++V +N MIA YA HG ++A++LFE M + GI PD VT V +LSA
Sbjct: 445 IDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSA 504
Query: 503 FRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAV 562
H G V+ G +YF SMT DY I+ + HY CMIDL GRA +L+ A MK++P E DA
Sbjct: 505 CSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAA 564
Query: 563 ILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMR 622
G+ L R++ N EL +A + + +E +N YV L+N+YAA G W ++GR+R +MR
Sbjct: 565 TWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMR 624
Query: 623 GMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+ G SWV V+++IH FTVGD HP+ + IY+ L
Sbjct: 625 DRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFL 663
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 136/539 (25%), Positives = 238/539 (44%), Gaps = 101/539 (18%)
Query: 22 TLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDS 81
T ++ N +I ++ LR +R LFD+MPER+V SWN ++S ++ +K+A+ +FD
Sbjct: 108 TRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDE 167
Query: 82 SPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI-----------RMDEFTVTS 130
P K+ +++N ML Y+ G DA +LF E ++ E I R
Sbjct: 168 MPCKNSISWNGMLAAYVQ-NGRIEDARRLF-ESKADWELISWNCMMGGYVKRNRLVDARG 225
Query: 131 TLNLCVKLLNVGFGRQLHAF-----------MVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
+ + V + + + + + S F ++++ Y + +EA
Sbjct: 226 IFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEA 285
Query: 180 CRVFEGCTEE------------------------------VNLISKNAMVAACCREGEME 209
RVF+G E+ N+ S N M+ + G++
Sbjct: 286 RRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIA 345
Query: 210 MALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
A F R P+ D++SW +I+GY Q+G EE L LFV M +G R N TF S LS C
Sbjct: 346 QARNFFDRMPQ-RDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTC 404
Query: 270 CGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSIS 329
+ ++ K++H V+K GL S +V + ++ +YCKC
Sbjct: 405 AEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKC---------------------- 442
Query: 330 SMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK-AQNCEALFDLLSEFVTKEGV 388
GN+++A F+ + EK VV W + +GY + EAL +L E + K G+
Sbjct: 443 ---------GNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEAL--MLFESMKKTGI 491
Query: 389 VTDALILVILLGACALQAALHPGKE-IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAE 447
+ D + +V +L AC+ + G E ++ G+ + K + ++D+ + G + A+
Sbjct: 492 LPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQ 551
Query: 448 IIFQNF-IERDLVLYNVMIACYAHHGH----EEKAILLFEEMLEKGIKPDAVTFVAILS 501
+ +N E D + ++ HG+ E+ A ++FE ++PD +LS
Sbjct: 552 NLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFE------MEPDNSGMYVLLS 604
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 352 TEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG 411
T+ ++V W + +++ C++ L + + + +A+I C +
Sbjct: 45 TDADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMI-----SGCLSNDKFYLA 99
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKC---GNMTYAEIIFQNFIERDLVLYNVMIACY 468
+++ +M + + + M S C N+ A ++F ERD+V +N M++ Y
Sbjct: 100 RQLFE-------KMPTRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGY 152
Query: 469 AHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE 528
A +G+ ++A +F+EM K +++++ +L+A+ G +E + F S AD+ E
Sbjct: 153 AQNGYVKEAKEIFDEMPCK----NSISWNGMLAAYVQNGRIEDARRLFES-KADW----E 203
Query: 529 TDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAV 562
+ CM+ Y + N+L A +P E D V
Sbjct: 204 LISWNCMMGGYVKRNRLVDARGIFDRMP-ERDEV 236
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + +KAGL N L+ +Y K + ++ +F+ + E+ V SWNT+I+ +
Sbjct: 417 HGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFG 476
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINA 100
K+A LF+S ++ + + G ++A
Sbjct: 477 KEALMLFESMKKTGILPDDVTMVGVLSA 504
>gi|359488823|ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
Length = 1984
Score = 364 bits (935), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 210/644 (32%), Positives = 360/644 (55%), Gaps = 7/644 (1%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
+ +N +I Y + L ++R LFDEMPERN SW+ +IS +K ++++ F+ +P +
Sbjct: 88 VVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNPFQ 147
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR 145
++V++ + + G++ G +ALKLF + + +R ++ T TS + C +L + G G
Sbjct: 148 NVVSWTAAISGFVR-NGLNFEALKLFFRL--LESGVRPNDVTFTSVVRACGELGDFGLGM 204
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
+ +VK + +SLI + + + A RVF+ E+ +++S A++ A
Sbjct: 205 SILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDR-MEKRDVVSWTAILDAYVET 263
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASA 265
G++ A + F PE N+ +SW+ +I+ Y Q+G AEE LKLF +M + G + N FA
Sbjct: 264 GDLREARRIFDEMPERNE-ISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACT 322
Query: 266 LSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNS 325
LSA LR + IH V K G+ + F+ S ++D+YCKC + + L +N
Sbjct: 323 LSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNV 382
Query: 326 FSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTK 385
+SM+ GYS+ G +EE F+ + EKN V W + +GY++ + CE + ++ + +
Sbjct: 383 VCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLV- 441
Query: 386 EGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTY 445
G + +L ACA A+L G +H I+++G+Q D + + L DMY+KCG++
Sbjct: 442 SGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGS 501
Query: 446 AEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG-IKPDAVTFVAILSAFR 504
++ +F+ E++ + + VMI A G ++++LFEEM + P+ + +++L A
Sbjct: 502 SKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACS 561
Query: 505 HCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVIL 564
HCG V+ G YFNSM Y I P+ HY C++DL R+ +L +A EF+++IP + +A
Sbjct: 562 HCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAW 621
Query: 565 GSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGM 624
+ L+ C+ ++ ++A +KL +L NN A YV L+N+YA+ G W ++ IRK MR
Sbjct: 622 AALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREK 681
Query: 625 KGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
+ GCSWV V +++H F D SH ++N IY L + E+
Sbjct: 682 GLKKSGGCSWVEVRNQVHSFYSEDGSHSQSNEIYGTLQLLRSEM 725
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 210/432 (48%), Gaps = 37/432 (8%)
Query: 17 IKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQAR 76
+KAG +N LI + + + +R++FD M +R+V SW I+ A +++ DL++AR
Sbjct: 211 VKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREAR 270
Query: 77 SLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCV 136
+FD P ++ +++++M+ Y + GY +ALKLF +M E + + TL+
Sbjct: 271 RIFDEMPERNEISWSAMIARY-SQSGYAEEALKLFSKM--VQEGFKPNISCFACTLSALA 327
Query: 137 KLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKN 196
L + G +H + K D F SSLID+Y KC ++ VF+ E+ N++ N
Sbjct: 328 SLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEK-NVVCWN 386
Query: 197 AMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVR 256
+MV G +E + F PE ND VSW T+I+GY++N E+ L++F + +G
Sbjct: 387 SMVGGYSINGRLEETEELFELIPEKND-VSWGTIIAGYLENEQCEKVLEVFNTLLVSGQT 445
Query: 257 WNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESM 316
N+ TF+S L AC + ++ +H ++K G+ + FV + + D+Y KC
Sbjct: 446 PNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKC--------- 496
Query: 317 LLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALF 376
G++ +++ F+ + EKN + WT + G ++
Sbjct: 497 ----------------------GDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESL 534
Query: 377 DLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM-GVQMDKKLISTLVD 435
L E V + L+L+ +L AC+ + G + ++ G++ K + +VD
Sbjct: 535 ILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVD 594
Query: 436 MYSKCGNMTYAE 447
+ S+ G + AE
Sbjct: 595 LLSRSGRLYEAE 606
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 125/496 (25%), Positives = 219/496 (44%), Gaps = 75/496 (15%)
Query: 135 CVKLL----NVGF---GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV---FE 184
CV LL N G G LHA ++KT + + L+ +Y CR + E ++ F+
Sbjct: 24 CVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFD 83
Query: 185 GCT---------------------------EEVNLISKNAMVAACCREGEMEMALKTFWR 217
G E N +S +A+++ + G +E ++ F R
Sbjct: 84 GSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFER 143
Query: 218 QPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKC 277
P + VSW ISG+V+NG E LKLF R+ E+GVR N+ TF S + AC L +
Sbjct: 144 NP-FQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGL 202
Query: 278 AKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSL 337
I V+K G VS+ ++ + + ++ A + R+ S ++++ Y
Sbjct: 203 GMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVE 262
Query: 338 QGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVI 397
G++ EARR FD + E+N + W+A+ + Y ++ E L S+ V +EG +
Sbjct: 263 TGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMV-QEGFKPNISCFAC 321
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD 457
L A A AL G IH ++ ++G+ D + S+L+D+Y KCG ++F +E++
Sbjct: 322 TLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKN 381
Query: 458 LVLYNVMIACYAHHGHE-------------------------------EKAILLFEEMLE 486
+V +N M+ Y+ +G EK + +F +L
Sbjct: 382 VVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLV 441
Query: 487 KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY--ACMIDLYGRANQ 544
G P+ TF ++L A C S+ +K N K+ + D + + D+Y +
Sbjct: 442 SGQTPNKSTFSSVLCA---CASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGD 498
Query: 545 LEKAIEFMKSIPTEED 560
+ + + + +P + +
Sbjct: 499 IGSSKQVFERMPEKNE 514
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 115/263 (43%), Gaps = 39/263 (14%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H K G+ + LI +Y K + R +FD + E+NV WN+++ + L
Sbjct: 339 HGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRL 398
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
++ LF+ P K+ V++ +++ GY+ E E L++F + + + ++ T +S L
Sbjct: 399 EETEELFELIPEKNDVSWGTIIAGYLENEQCEK-VLEVFNTLLVSGQ--TPNKSTFSSVL 455
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C + ++ G +H ++K F ++L DMY+KC
Sbjct: 456 CACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKC------------------- 496
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
G++ + + F R PE N+ +SW +I G ++G A E L LF M
Sbjct: 497 -------------GDIGSSKQVFERMPEKNE-ISWTVMIQGLAESGFAVESLILFEEMER 542
Query: 253 NG-VRWNEHTFASALSAC--CGL 272
V NE S L AC CGL
Sbjct: 543 TSEVAPNELMLLSVLFACSHCGL 565
Score = 39.3 bits (90), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 42/90 (46%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L + + H + IK G+ L +Y+K + S+++F+ MPE+N SW +I
Sbjct: 463 SLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQ 522
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSML 94
+S ++ LF+ V N ++
Sbjct: 523 GLAESGFAVESLILFEEMERTSEVAPNELM 552
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 202/642 (31%), Positives = 336/642 (52%), Gaps = 35/642 (5%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLV 88
N L+ Y K +R++FD P N+F++N ++S + L SLF S +D V
Sbjct: 45 NHLLTAYGKAGRHARARRVFDATPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTV 104
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLH 148
+YN+++ G+ + G A A++L+ + A +R T+++ + L + GRQ H
Sbjct: 105 SYNAVIAGF-SGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFH 163
Query: 149 AFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEM 208
+++ + F S L+ MY+K +A RVF+ + N++ N M+ R +
Sbjct: 164 CQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDE-MDGKNVVMYNTMITGLLRCKMV 222
Query: 209 EMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSA 268
E A + F + D ++W T+++G+ QNG + L F RM G+ +++TF S L+A
Sbjct: 223 EEARRLFEVMTD-RDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTA 281
Query: 269 CCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSI 328
C L ++ K+IH+++++ N FV S +VD+Y KC ++ AE+
Sbjct: 282 CGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETA------------ 329
Query: 329 SSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGV 388
F ++ KN++ WTAL GY + E + SE + ++G+
Sbjct: 330 -------------------FRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSE-MQRDGI 369
Query: 389 VTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEI 448
D L ++ +CA A+L G + H L G+ + + LV +Y KCG++ A
Sbjct: 370 DPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHR 429
Query: 449 IFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGS 508
+F + D V + ++ YA G ++ I LFE+ML K +KPD VTF+ +LSA G
Sbjct: 430 LFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGF 489
Query: 509 VEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFL 568
VE G YF+SM D+ I P DHY CMIDLY R+ +L++A EF+K +P DA+ G+ L
Sbjct: 490 VEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLL 549
Query: 569 NVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNR 628
+ CRL + E+ A E LL ++ N A YV L +++A +GNW ++ ++R+ MR + +
Sbjct: 550 SACRLRGDMEIGQWAAENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQVKK 609
Query: 629 FAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYE 670
GCSW+ ++++HIF+ D SHP + IY L ++ E
Sbjct: 610 EPGCSWIKYKNKVHIFSADDQSHPFSKGIYEKLEWLNSKMLE 651
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 123/476 (25%), Positives = 224/476 (47%), Gaps = 70/476 (14%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H Q ++ G + + L+ +Y+K L+ +++++FDEM +NV +NT+I+ ++ +
Sbjct: 163 HCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMV 222
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
++AR LF+ +D +T+ +M+ G+ G E+ AL F M+ + I +D++T S L
Sbjct: 223 EEARRLFEVMTDRDCITWTTMVTGFTQ-NGLESQALNFFRRMRF--QGIAIDQYTFGSIL 279
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C L + G+Q+HA++++T D + F S+L+DMYSKCR + A
Sbjct: 280 TACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPA------------- 326
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+T +R+ + +SW LI GY QNG +EE +++F M
Sbjct: 327 --------------------ETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQR 366
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+G+ ++ T S +S+C L +++ + H L +GL+ VS+ +V +Y KC
Sbjct: 367 DGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKC----- 421
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G++E+A R FD + + V WTAL +GY +
Sbjct: 422 --------------------------GSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRA 455
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG-KEIHAYILRMGVQMDKKLIS 431
+ DL + + K+ V D + + +L AC+ + G H+ G+ +
Sbjct: 456 KETIDLFEKMLAKD-VKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYT 514
Query: 432 TLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
++D+YS+ G + A E I Q + D + + +++ G E E +LE
Sbjct: 515 CMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGQWAAENLLE 570
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 134/340 (39%), Gaps = 71/340 (20%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L++ H I+ + L+ +YSK ++ + F M +N+ SW +I
Sbjct: 288 LEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALI-- 345
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
GY G +A+++F EMQ + I D+
Sbjct: 346 -----------------------------VGY-GQNGCSEEAVRVFSEMQR--DGIDPDD 373
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
FT+ S ++ C L ++ G Q H + + ++L+ +Y KC E+A R+F+
Sbjct: 374 FTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFD- 432
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
EM +D VSW L++GY Q G A+E +
Sbjct: 433 -----------------------EML---------FHDQVSWTALVTGYAQFGRAKETID 460
Query: 246 LFVRMGENGVRWNEHTFASALSAC--CGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
LF +M V+ + TF LSAC G C+ HS +G++ + ++D+
Sbjct: 461 LFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSY-FHSMQKDHGIVPIDDHYTCMIDL 519
Query: 304 YCKCENMNYAESMLLLKGVR-NSFSISSMIVGYSLQGNME 342
Y + + AE + + ++ +++ L+G+ME
Sbjct: 520 YSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDME 559
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/210 (19%), Positives = 78/210 (37%), Gaps = 39/210 (18%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L+E H A+ +GL +N L+ +Y K + ++ +LFDEM + SW +++
Sbjct: 388 SLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVT 447
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINA---EGYEADALKLFIEMQSADEHI 121
+ K+ LF+ KD+ G ++A G+ F MQ +
Sbjct: 448 GYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIV 507
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+D+ + +ID+YS+ +EA
Sbjct: 508 PIDDH------------------------------------YTCMIDLYSRSGRLKEAEE 531
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMA 211
+ + I +++AC G+ME+
Sbjct: 532 FIKQMPMHPDAIGWGTLLSACRLRGDMEIG 561
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 206/647 (31%), Positives = 341/647 (52%), Gaps = 35/647 (5%)
Query: 24 TTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP 83
T N L+ Y+ LL +R++FD MP RN+ + N+++SA ++ ++ LF S P
Sbjct: 45 PTYLLNTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALARAGLVRDMERLFTSLP 104
Query: 84 HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGF 143
+D V+YN++L G+ + G A A ++ + + +R T++ + + L +
Sbjct: 105 QRDAVSYNALLAGF-SRAGAHARAAGAYVALLRDEAGVRPSRITMSGVVMVASALGDRAL 163
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
GRQ+H +++ A F S L+DMY+K +A RVF+ E N++ N M+
Sbjct: 164 GRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDE-MEGKNVVMCNTMITGLL 222
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
R +M + + E D+++W T+++G QNG E L +F RM GV +++TF
Sbjct: 223 R-CKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFG 281
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
S L+AC L ++ K+IH+++ + N FV S +VD+Y KC ++ AE++
Sbjct: 282 SILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAV------- 334
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV 383
F + KN++ WTA+ GY + E + SE +
Sbjct: 335 ------------------------FRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSE-M 369
Query: 384 TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNM 443
++G+ D L ++ +CA A+L G + H L G++ + + LV +Y KCG++
Sbjct: 370 QRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSI 429
Query: 444 TYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAF 503
A +F D V + ++ YA G ++ I LFE+ML KG+KPD VTF+ +LSA
Sbjct: 430 EDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSAC 489
Query: 504 RHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVI 563
G V+ G YF+SM D+ I P DHY CMIDLY R+ L++A EF+K +P DA
Sbjct: 490 SRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFG 549
Query: 564 LGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRG 623
+ L+ CRL + E+ A E LL+L+ N A YV L +++A++G W ++ ++R+ MR
Sbjct: 550 WATLLSACRLRGDMEIGKWAAENLLKLDPQNPASYVLLCSMHASKGEWNDVAKLRRGMRD 609
Query: 624 MKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYE 670
+ + GCSW+ ++++HIF+ D SHP + IY L ++ E
Sbjct: 610 RQVKKEPGCSWIKYKNKVHIFSADDQSHPFSRTIYEKLQWLNSKMVE 656
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 132/507 (26%), Positives = 234/507 (46%), Gaps = 113/507 (22%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H Q ++ G T + L+ +Y+K + ++R++FDEM +NV NT+I+ ++ +
Sbjct: 168 HCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLLRCKMV 227
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+AR+LF++ +D +T+ +M+ G + G E++AL +F M++ E + +D++T S L
Sbjct: 228 AEARALFEAIEERDSITWTTMVTG-LTQNGLESEALDVFRRMRA--EGVGIDQYTFGSIL 284
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C L + G+Q+HA++ +T + + F S+L+DMYSKCR A VF
Sbjct: 285 TACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFR-------- 336
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+ W+ + +SW +I GY QNG EE +++F M
Sbjct: 337 --------------------RMMWK-----NIISWTAMIVGYGQNGCGEEAVRVFSEMQR 371
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+G++ ++ T S +S+C L +++ + H L +GL VS+ +V +Y KC
Sbjct: 372 DGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKC----- 426
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G++E+A R FD ++ + V WTAL GY +
Sbjct: 427 --------------------------GSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKA 460
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI-- 430
+ DL + ++K GV D + + +L AC+ + G+ +Y M Q D ++
Sbjct: 461 KETIDLFEKMLSK-GVKPDGVTFIGVLSACSRSGLVDKGR---SYFHSM--QQDHDIVPL 514
Query: 431 ----STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
+ ++D+YS+ G + AE FI++ M C
Sbjct: 515 DDHYTCMIDLYSRSGWLKQAE----EFIKQ-------MPRC------------------- 544
Query: 487 KGIKPDAVTFVAILSAFRHCGSVEMGE 513
PDA + +LSA R G +E+G+
Sbjct: 545 ----PDAFGWATLLSACRLRGDMEIGK 567
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 72/173 (41%), Gaps = 10/173 (5%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L+E H A+ +GL +N L+ +Y K + ++ +LFDEM + SW ++
Sbjct: 393 SLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVM 452
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINA---EGYEADALKLFIEMQSADEHI 121
+ K+ LF+ K + G ++A G F MQ + +
Sbjct: 453 GYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIV 512
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
+D+ T ++L + G+ +Q F+ + F ++L+ S CR
Sbjct: 513 PLDDH-YTCMIDLYSR---SGWLKQAEEFIKQMPRCPDAFGWATLL---SACR 558
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 220/680 (32%), Positives = 357/680 (52%), Gaps = 93/680 (13%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSK----HNLLRESRKLFDEMPERNV------------ 56
H A+K G +T + L+ +Y+K ++ LR +LF EM + V
Sbjct: 181 HGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEMQKAGVGALQLHGHALKT 240
Query: 57 -FSWNTIISAC-----IKSHDLKQ-ARSLFDSSPHKDLVTYNSMLCGYINAE-GYEADAL 108
F + +I +K ++L + LF+S P+ +L +YN+++ GY ++ G EA L
Sbjct: 241 DFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEA--L 298
Query: 109 KLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLID 168
+F +Q + + +DE +++ C + G Q+H +K+ ++ ++++D
Sbjct: 299 GMFRLLQKSG--LGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILD 356
Query: 169 MYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWN 228
MY KC EAC VFE ++S+ DAVSWN
Sbjct: 357 MYGKCGALVEACLVFE------EMVSR---------------------------DAVSWN 383
Query: 229 TLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKN 288
+I+ + QNG+ E+ L LFV M ++G+ +E T+ S L AC G + + C EIH+ ++K+
Sbjct: 384 AIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKS 443
Query: 289 GLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHF 348
+ + FV ++D+Y KC G ME+A +
Sbjct: 444 RMGLDSFVGIALIDMYSKC-------------------------------GMMEKAEKLH 472
Query: 349 DSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAAL 408
D L E+ VV W A+ SG+ + E S+ + + GV D +L CA +
Sbjct: 473 DRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKML-EMGVDPDNFTYATILDTCANLVTV 531
Query: 409 HPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACY 468
GK+IHA I++ +Q D + STLVDMYSKCGNM ++IF+ RD V +N M+ Y
Sbjct: 532 ELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGY 591
Query: 469 AHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE 528
A HG E+A+ +FE M + +KP+ TF+A+L A H G VE G YF+SM ++Y + P+
Sbjct: 592 AQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQ 651
Query: 529 TDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLL 588
+HY+C++D+ GR+ Q+ KA+E ++ +P E DAVI + L+ C+++ N E+A +A +L
Sbjct: 652 LEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAYSIL 711
Query: 589 RLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGD 648
+LE + A YV L+N+YA G W E+ ++RK MR + GCSW+ ++ E+H F VGD
Sbjct: 712 QLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGD 771
Query: 649 VSHPKTNAIYSVLAIFTGEL 668
+HP++ IY L + T E+
Sbjct: 772 KAHPRSKEIYENLDVLTDEM 791
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 121/474 (25%), Positives = 219/474 (46%), Gaps = 52/474 (10%)
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
G+Q HA M+ T + F + LI MY KC A +VF+G + + +S NAM+
Sbjct: 61 GKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGMPQR-DTVSWNAMLFGYA 119
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF-VRMGENGVRWNEHTF 262
G++ +A K F P V ++LF RMG G ++ TF
Sbjct: 120 GRGDIGVAQKLFDAMPGTGCGV------------------VELFDFRMGRMGTVFDRTTF 161
Query: 263 ASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC--ENMNYAESMLLLK 320
A L +C L + +IH +K G + S ++D+Y KC +N + + L K
Sbjct: 162 AVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFK 221
Query: 321 GVRNSFSISSMIVGYSLQ--------------------GNMEE-ARRHFDSLTEKNVVVW 359
++ + + + G++L+ N+ + + + F+SL N+ +
Sbjct: 222 EMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSY 281
Query: 360 TALFSGYVKA-QNCEAL--FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHA 416
A+ GY ++ + EAL F LL K G+ D + L ACA+ G ++H
Sbjct: 282 NAIIVGYARSDKGIEALGMFRLLQ----KSGLGLDEVSLSGAXRACAVIKGDLEGLQVHG 337
Query: 417 YILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
++ Q + + + ++DMY KCG + A ++F+ + RD V +N +IA + +G+EEK
Sbjct: 338 LSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEK 397
Query: 477 AILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMI 536
+ LF ML+ G++PD T+ ++L A ++ G + N + ++ ++ +I
Sbjct: 398 TLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKS-RMGLDSFVGIALI 456
Query: 537 DLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRL 590
D+Y + +EKA E + E+ V + ++ L + +E A + K+L +
Sbjct: 457 DMYSKCGMMEKA-EKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEM 509
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 116/473 (24%), Positives = 192/473 (40%), Gaps = 103/473 (21%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACI 67
E L H ++K+ N ++ +Y K L E+ +F+EM R+ SWN II+A
Sbjct: 331 EGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAA-- 388
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM-QSADEHIRMDEF 126
H+ G E L LF+ M QS E DEF
Sbjct: 389 --HE----------------------------QNGNEEKTLSLFVWMLQSGMEP---DEF 415
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
T S L C + G ++H ++K+ F +LIDMYSKC E+A ++ +
Sbjct: 416 TYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRL 475
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
E+ ++S NA++ SG+ +EE K
Sbjct: 476 AEQT-VVSWNAII--------------------------------SGFSLQKQSEEAQKT 502
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
F +M E GV + T+A+ L C L V+ K+IH+ ++K L S+ ++SS +VD+Y K
Sbjct: 503 FSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSK 562
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
C GNM++ + F+ ++ V W A+ GY
Sbjct: 563 C-------------------------------GNMQDFQLIFEKAPNRDFVTWNAMVCGY 591
Query: 367 VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE-IHAYILRMGVQM 425
+ E + E++ E V + + +L AC + G H+ + G+
Sbjct: 592 AQHGLGEEALKIF-EYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDP 650
Query: 426 DKKLISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
+ S +VD+ + G ++ A E+I E D V++ +++ HG+ E A
Sbjct: 651 QLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVA 703
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 85/182 (46%), Gaps = 17/182 (9%)
Query: 259 EHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLL 318
+ TF+ C + + K+ H+ ++ FV++ ++ +Y KC ++ +A +
Sbjct: 42 KKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFD 101
Query: 319 LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDL 378
R++ S ++M+ GY+ +G++ A++ FD++ G V+ LFD
Sbjct: 102 GMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGC--------GVVE------LFDF 147
Query: 379 LSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYS 438
+ + G V D ++L +C+ G +IH ++MG D S L+DMY+
Sbjct: 148 R---MGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYA 204
Query: 439 KC 440
KC
Sbjct: 205 KC 206
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%)
Query: 379 LSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYS 438
+S F + + T + C+ + AL PGK+ HA ++ + + + L+ MY
Sbjct: 29 ISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYI 88
Query: 439 KCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
KC ++ +A +F +RD V +N M+ YA G A LF+ M G
Sbjct: 89 KCSDLGFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTG 138
>gi|147859209|emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
Length = 728
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 208/644 (32%), Positives = 359/644 (55%), Gaps = 7/644 (1%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
+ +N +I Y + L ++R LFDEMPERN SW+ +IS +K ++++ F+ +P +
Sbjct: 88 VVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNPFQ 147
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR 145
++V++ + + G++ G +ALKLF + + +R ++ T TS + C +L + G G
Sbjct: 148 NVVSWTAAISGFVR-NGLNFEALKLFFRL--LESGVRPNDVTFTSVVRACGELGDFGLGM 204
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
+ +VK + +SLI + + + A RVF+ E+ +++S A++ A
Sbjct: 205 SILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDR-MEKRDVVSWTAILDAYVET 263
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASA 265
G++ A + F PE N+ +SW+ +I+ Y Q+G AEE LKLF +M + G + N FA
Sbjct: 264 GDLREARRIFDEMPERNE-ISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACT 322
Query: 266 LSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNS 325
LSA LR + IH V K G+ + F+ S ++D+YCKC + + L +N
Sbjct: 323 LSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNV 382
Query: 326 FSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTK 385
+SM+ GYS+ G +EE F+ + EKN W + +GY++ + CE + ++ + +
Sbjct: 383 VCWNSMVGGYSINGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVFNTLLVS 442
Query: 386 EGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTY 445
G + +L ACA A+L G +H I+++G+Q D + + L DMY+KCG++
Sbjct: 443 -GQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGS 501
Query: 446 AEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG-IKPDAVTFVAILSAFR 504
++ +F+ E++ + + VMI A G ++++LFEEM + P+ + +++L A
Sbjct: 502 SKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACS 561
Query: 505 HCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVIL 564
HCG V+ G YFNSM Y I P+ HY C++DL R+ +L +A EF+++IP + +A
Sbjct: 562 HCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAW 621
Query: 565 GSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGM 624
+ L+ C+ ++ ++A +KL +L NN A YV L+N+YA+ G W ++ IRK MR
Sbjct: 622 AALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREK 681
Query: 625 KGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
+ GCSWV V +++H F D SH +++ IY L + E+
Sbjct: 682 GLKKSGGCSWVEVRNQVHSFYSEDGSHSQSDEIYGTLQLLRSEM 725
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 209/432 (48%), Gaps = 37/432 (8%)
Query: 17 IKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQAR 76
+KAG +N LI + + + +R++FD M +R+V SW I+ A +++ DL++AR
Sbjct: 211 VKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREAR 270
Query: 77 SLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCV 136
+FD P ++ +++++M+ Y + GY +ALKLF +M E + + TL+
Sbjct: 271 RIFDEMPERNEISWSAMIARY-SQSGYAEEALKLFSKM--VQEGFKPNISCFACTLSALA 327
Query: 137 KLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKN 196
L + G +H + K D F SSLID+Y KC ++ VF+ E+ N++ N
Sbjct: 328 SLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEK-NVVCWN 386
Query: 197 AMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVR 256
+MV G +E + F PE ND SW T+J+GY++N E+ L++F + +G
Sbjct: 387 SMVGGYSINGRLEEXEELFELIPEKNDX-SWGTIJAGYLENEQCEKVLEVFNTLLVSGQT 445
Query: 257 WNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESM 316
N+ TF+S L AC + ++ +H ++K G+ + FV + + D+Y KC
Sbjct: 446 PNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKC--------- 496
Query: 317 LLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALF 376
G++ +++ F+ + EKN + WT + G ++
Sbjct: 497 ----------------------GDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESL 534
Query: 377 DLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM-GVQMDKKLISTLVD 435
L E V + L+L+ +L AC+ + G + ++ G++ K + +VD
Sbjct: 535 ILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVD 594
Query: 436 MYSKCGNMTYAE 447
+ S+ G + AE
Sbjct: 595 LLSRSGRLYEAE 606
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 125/496 (25%), Positives = 219/496 (44%), Gaps = 75/496 (15%)
Query: 135 CVKLL----NVGF---GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV---FE 184
CV LL N G G LHA ++KT + + L+ +Y CR + E ++ F+
Sbjct: 24 CVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFD 83
Query: 185 GCT---------------------------EEVNLISKNAMVAACCREGEMEMALKTFWR 217
G E N +S +A+++ + G +E ++ F R
Sbjct: 84 GSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFER 143
Query: 218 QPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKC 277
P + VSW ISG+V+NG E LKLF R+ E+GVR N+ TF S + AC L +
Sbjct: 144 NP-FQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGL 202
Query: 278 AKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSL 337
I V+K G VS+ ++ + + ++ A + R+ S ++++ Y
Sbjct: 203 GMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVE 262
Query: 338 QGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVI 397
G++ EARR FD + E+N + W+A+ + Y ++ E L S+ V +EG +
Sbjct: 263 TGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMV-QEGFKPNISCFAC 321
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD 457
L A A AL G IH ++ ++G+ D + S+L+D+Y KCG ++F +E++
Sbjct: 322 TLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKN 381
Query: 458 LVLYNVMIACYAHHGHE-------------------------------EKAILLFEEMLE 486
+V +N M+ Y+ +G EK + +F +L
Sbjct: 382 VVCWNSMVGGYSINGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVFNTLLV 441
Query: 487 KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY--ACMIDLYGRANQ 544
G P+ TF ++L A C S+ +K N K+ + D + + D+Y +
Sbjct: 442 SGQTPNKSTFSSVLCA---CASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGD 498
Query: 545 LEKAIEFMKSIPTEED 560
+ + + + +P + +
Sbjct: 499 IGSSKQVFERMPEKNE 514
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 114/263 (43%), Gaps = 39/263 (14%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H K G+ + LI +Y K + R +FD + E+NV WN+++ + L
Sbjct: 339 HGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRL 398
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
++ LF+ P K+ ++ ++J GY+ E E L++F + + + ++ T +S L
Sbjct: 399 EEXEELFELIPEKNDXSWGTIJAGYLENEQCE-KVLEVFNTLLVSGQ--TPNKSTFSSVL 455
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C + ++ G +H ++K F ++L DMY+KC
Sbjct: 456 CACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKC------------------- 496
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
G++ + + F R PE N+ +SW +I G ++G A E L LF M
Sbjct: 497 -------------GDIGSSKQVFERMPEKNE-ISWTVMIQGLAESGFAVESLILFEEMER 542
Query: 253 NG-VRWNEHTFASALSAC--CGL 272
V NE S L AC CGL
Sbjct: 543 TSEVAPNELMLLSVLFACSHCGL 565
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 42/90 (46%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L + + H + IK G+ L +Y+K + S+++F+ MPE+N SW +I
Sbjct: 463 SLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQ 522
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSML 94
+S ++ LF+ V N ++
Sbjct: 523 GLAESGFAVESLILFEEMERTSEVAPNELM 552
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 205/603 (33%), Positives = 330/603 (54%), Gaps = 70/603 (11%)
Query: 67 IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAE-GYEADALKLFIEMQSADEHIRMDE 125
+K ++L A+ LF+S P+ +L +YN+++ GY ++ G EA L +F +Q + + +DE
Sbjct: 321 MKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEA--LGMFRLLQKSG--LGLDE 376
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
+++ C + G Q+H +K+ ++ ++++DMY KC EAC VFE
Sbjct: 377 VSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFE- 435
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
++S+ DAVSWN +I+ + QNG+ E+ L
Sbjct: 436 -----EMVSR---------------------------DAVSWNAIIAAHEQNGNEEKTLS 463
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
LFV M ++G+ +E T+ S L AC G + + C EIH+ ++K+ L + FV ++D+Y
Sbjct: 464 LFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYS 523
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
KC G ME+A + D L E+ VV W A+ SG
Sbjct: 524 KC-------------------------------GMMEKAEKLHDRLAEQTVVSWNAIISG 552
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
+ + E S+ + + GV D +L CA + GK+IHA I++ +Q
Sbjct: 553 FSLQKQSEEAQKTFSKML-EMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQS 611
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
D + STLVDMYSKCGNM ++IF+ RD V +N M+ YA HG E+A+ +FE M
Sbjct: 612 DAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQ 671
Query: 486 EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQL 545
+ +KP+ TF+A+L A H G VE G YF+SM ++Y + P+ +HY+C++D+ GR+ Q+
Sbjct: 672 LENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQV 731
Query: 546 EKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVY 605
KA+E ++ +P E DAVI + L++C+++ N E+A +A +L+LE + A YV L+N+Y
Sbjct: 732 SKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIY 791
Query: 606 AAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFT 665
A G W E+ ++RK MR + GCSW+ ++ E+H F VGD +HP++ IY L + T
Sbjct: 792 ANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLT 851
Query: 666 GEL 668
E+
Sbjct: 852 DEM 854
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 154/581 (26%), Positives = 270/581 (46%), Gaps = 76/581 (13%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + I T TN LI +Y K + L + K+FD MP+R+ SWN ++ D+
Sbjct: 65 HARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDI 124
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
A+ LFD+ P +D+V++NS++ GY++ G + +F++M D T L
Sbjct: 125 GVAQKLFDAMPERDVVSWNSLISGYLH-NGDHRKVIDVFLQMGRMG--TVFDRTTFAVVL 181
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C L + G G Q+H VK D S+L+DMY+KC+ + + + F E+ N
Sbjct: 182 KSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEK-NW 240
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+S +A++A C VQN D GL+LF M +
Sbjct: 241 VSWSAIIAGC--------------------------------VQNDDLRGGLELFKEMQK 268
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
GV ++ TFAS +C GL ++ ++H LK ++ + + +D+Y KC N++
Sbjct: 269 AGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLS- 327
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA-QN 371
+A++ F+SL N+ + A+ GY ++ +
Sbjct: 328 ------------------------------DAQKLFNSLPNHNLQSYNAIIVGYARSDKG 357
Query: 372 CEAL--FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
EAL F LL K G+ D + L ACA+ G ++H ++ Q + +
Sbjct: 358 IEALGMFRLLQ----KSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICV 413
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+ ++DMY KCG + A ++F+ + RD V +N +IA + +G+EEK + LF ML+ G+
Sbjct: 414 ANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGM 473
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
+PD T+ ++L A ++ G + N + ++ ++ +ID+Y + +EKA
Sbjct: 474 EPDEFTYGSVLKACAGWQALNCGMEIHNRIIKS-RLGLDSFVGIALIDMYSKCGMMEKA- 531
Query: 550 EFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRL 590
E + E+ V + ++ L + +E A + K+L +
Sbjct: 532 EKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEM 572
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 176/367 (47%), Gaps = 37/367 (10%)
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
G+Q HA M+ T + F + LI MY KC E A +VF+G + + +S NAM+
Sbjct: 61 GKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQR-DTVSWNAMLFGYA 119
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
G++ +A K F PE D VSWN+LISGY+ NGD + + +F++MG G ++ TFA
Sbjct: 120 GRGDIGVAQKLFDAMPE-RDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFA 178
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
L +C L + +IH +K G + S ++D+Y KC+ ++
Sbjct: 179 VVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLD------------ 226
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV 383
S+Q F S+ EKN V W+A+ +G V+ + +L E +
Sbjct: 227 -----------CSIQ--------FFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKE-M 266
Query: 384 TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNM 443
K GV + +CA +AL G ++H + L+ D + + +DMY KC N+
Sbjct: 267 QKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNL 326
Query: 444 TYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAF 503
+ A+ +F + +L YN +I YA +A+ +F + + G+ D V+ AF
Sbjct: 327 SDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSG---AF 383
Query: 504 RHCGSVE 510
R C ++
Sbjct: 384 RACAVIK 390
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 116/473 (24%), Positives = 192/473 (40%), Gaps = 103/473 (21%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACI 67
E L H ++K+ N ++ +Y K L E+ +F+EM R+ SWN II+A
Sbjct: 394 EGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAA-- 451
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM-QSADEHIRMDEF 126
H+ G E L LF+ M QS E DEF
Sbjct: 452 --HE----------------------------QNGNEEKTLSLFVWMLQSGMEP---DEF 478
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
T S L C + G ++H ++K+ F +LIDMYSKC E+A ++ +
Sbjct: 479 TYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRL 538
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
E+ ++S NA++ SG+ +EE K
Sbjct: 539 AEQT-VVSWNAII--------------------------------SGFSLQKQSEEAQKT 565
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
F +M E GV + T+A+ L C L V+ K+IH+ ++K L S+ ++SS +VD+Y K
Sbjct: 566 FSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSK 625
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
C GNM++ + F+ ++ V W A+ GY
Sbjct: 626 C-------------------------------GNMQDFQLIFEKAPNRDFVTWNAMVCGY 654
Query: 367 VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE-IHAYILRMGVQM 425
+ E + E++ E V + + +L AC + G H+ + G+
Sbjct: 655 AQHGLGEEALKIF-EYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDP 713
Query: 426 DKKLISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
+ S +VD+ + G ++ A E+I E D V++ +++ HG+ E A
Sbjct: 714 QLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVA 766
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 151/317 (47%), Gaps = 18/317 (5%)
Query: 259 EHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLL 318
+ TF+ C + + K+ H+ ++ FV++ ++ +Y KC ++ +A +
Sbjct: 42 KKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFD 101
Query: 319 LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDL 378
R++ S ++M+ GY+ +G++ A++ FD++ E++VV W +L SGY+ + + D+
Sbjct: 102 GMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDV 161
Query: 379 LSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYS 438
+ + + G V D ++L +C+ G +IH ++MG D S L+DMY+
Sbjct: 162 FLQ-MGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYA 220
Query: 439 KCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVA 498
KC + + F + E++ V ++ +IA + + LF+EM + G+ TF +
Sbjct: 221 KCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFAS 280
Query: 499 I------LSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
+ LSA R GS G D I T +D+Y + N L A +
Sbjct: 281 VFRSCAGLSALR-LGSQLHGHALKTDFGTDVVIGTAT------LDMYMKCNNLSDAQKLF 333
Query: 553 KSIPTEE----DAVILG 565
S+P +A+I+G
Sbjct: 334 NSLPNHNLQSYNAIIVG 350
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 101/239 (42%), Gaps = 39/239 (16%)
Query: 379 LSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYS 438
+S F + + T + C+ + AL PGK+ HA ++ + + + L+ MY
Sbjct: 29 ISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYI 88
Query: 439 KC-------------------------------GNMTYAEIIFQNFIERDLVLYNVMIAC 467
KC G++ A+ +F ERD+V +N +I+
Sbjct: 89 KCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISG 148
Query: 468 YAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVE--MGEKYFNSMTADYKI 525
Y H+G K I +F +M G D TF +L + C S+E G + +
Sbjct: 149 YLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVL---KSCSSLEDHGGGIQIHGLAVKMGF 205
Query: 526 SPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAE 584
+ + ++D+Y + +L+ +I+F S+P E++ V + + C +N +L G E
Sbjct: 206 DCDVVTGSALLDMYAKCKKLDCSIQFFHSMP-EKNWVSWSAIIAGCV--QNDDLRGGLE 261
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 213/668 (31%), Positives = 342/668 (51%), Gaps = 78/668 (11%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPER----NVFSWNTII 63
+AL + Q + G+ + +I + L+ RK+ +++ R +V +
Sbjct: 103 KALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALA 162
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYI-NAEGYEADALKLFIEMQSADEHIR 122
S K L+ AR +FD P +D+V++N+++ GY N + YEA L LF EMQ I+
Sbjct: 163 SMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEA--LALFSEMQV--NGIK 218
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
+ T+ S + +C LL + G+Q+H + +++ ++ V+ L++MY+KC
Sbjct: 219 PNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKC--------- 269
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
G + A K F R P + D SWN +I GY N E
Sbjct: 270 -----------------------GNVNTAHKLFERMP-IRDVASWNAIIGGYSLNSQHHE 305
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
L F RM G++ N T S L AC L ++ ++IH + +++G SN V + +V+
Sbjct: 306 ALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVN 365
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
+Y KC GN+ A + F+ + +KNVV W A+
Sbjct: 366 MYAKC-------------------------------GNVNSAYKLFERMPKKNVVAWNAI 394
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
SGY + + L E + +G+ D+ +V +L ACA AL GK+IH Y +R G
Sbjct: 395 ISGYSQHGHPHEALALFIE-MQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSG 453
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
+ + + + LVD+Y+KCGN+ A+ +F+ E+D+V + MI Y HGH E A+ LF
Sbjct: 454 FESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFS 513
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRA 542
+M E G K D + F AIL+A H G V+ G +YF M +DY ++P+ +HYAC++DL GRA
Sbjct: 514 KMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRA 573
Query: 543 NQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLA 602
L++A +K++ E DA + G+ L CR++ N EL +A + L L+ +N YV L+
Sbjct: 574 GHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYYVLLS 633
Query: 603 NVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLA 662
N+YA W ++ ++RK M+ + GCS V V ++ F VGD +HP++ IY++L
Sbjct: 634 NIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGDRTHPQSEQIYAMLE 693
Query: 663 IFTGELYE 670
I LYE
Sbjct: 694 I----LYE 697
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 135/553 (24%), Positives = 235/553 (42%), Gaps = 140/553 (25%)
Query: 4 LNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
L L++ H AI++G+ + N L+++Y+K + + KLF+ MP R+V SWN II
Sbjct: 235 LALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAII 294
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGY-INAEGYEADALKLFIEMQSADEHIR 122
GY +N++ +E AL F MQ I+
Sbjct: 295 G-------------------------------GYSLNSQHHE--ALAFFNRMQV--RGIK 319
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
+ T+ S L C L + G+Q+H + +++ +++ ++L++MY+KC
Sbjct: 320 PNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKC--------- 370
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
G + A K F R P+ N V+WN +ISGY Q+G E
Sbjct: 371 -----------------------GNVNSAYKLFERMPKKN-VVAWNAIISGYSQHGHPHE 406
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
L LF+ M G++ + S L AC ++ K+IH + +++G SN V +G+VD
Sbjct: 407 ALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVD 466
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
+Y KC N+N A+ + ++ S ++MI+ Y + G+ E+A
Sbjct: 467 IYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDAL----------------- 509
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
ALF + E TK D + +L AC+ HA ++ G
Sbjct: 510 -----------ALFSKMQETGTK----LDHIAFTAILTACS-----------HAGLVDQG 543
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
+Q Y +C Y + L Y ++ GH ++A + +
Sbjct: 544 LQ------------YFQCMKSDYG-------LAPKLEHYACLVDLLGRAGHLDEANGIIK 584
Query: 483 EMLEKGIKPDAVTFVAILSAFR-HCGSVEMGEKYFNSMTADYKISPE-TDHYACMIDLYG 540
M ++PDA + A+L A R HC ++E+GE+ + +++ P+ +Y + ++Y
Sbjct: 585 NM---SLEPDANVWGALLGACRIHC-NIELGEQAAKHL---FELDPDNAGYYVLLSNIYA 637
Query: 541 RANQLEKAIEFMK 553
A + E + K
Sbjct: 638 EAQRWEDVAKLRK 650
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 189/381 (49%), Gaps = 48/381 (12%)
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
N + V+AC + + F + N+AV W I GYV+NG + L+L+ +M
Sbjct: 59 NKVKTTREVSACANQTQ-------FTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYYQM 111
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
G+ ++ F S + AC +++ +++H ++ G S+ V + + +Y KC
Sbjct: 112 QRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKC--- 168
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK-A 369
G++E AR+ FD + +++VV W A+ +GY +
Sbjct: 169 ----------------------------GSLENARQVFDRMPKRDVVSWNAIIAGYSQNG 200
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
Q EAL L SE G+ ++ LV ++ CA AL GK+IH Y +R G++ D +
Sbjct: 201 QPYEAL-ALFSEMQVN-GIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLV 258
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
++ LV+MY+KCGN+ A +F+ RD+ +N +I Y+ + +A+ F M +GI
Sbjct: 259 VNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGI 318
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFN-SMTADYKISPETDHYACMIDLYGRANQLEKA 548
KP+++T V++L A H ++E G++ ++ + ++ + + ++++Y + + A
Sbjct: 319 KPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGN--ALVNMYAKCGNVNSA 376
Query: 549 IEFMKSIPTEE----DAVILG 565
+ + +P + +A+I G
Sbjct: 377 YKLFERMPKKNVVAWNAIISG 397
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 110/219 (50%), Gaps = 6/219 (2%)
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
N VVW GYVK L + + + G+ D L+ + ++ AC Q+ L G+++
Sbjct: 84 NAVVWKETIIGYVKNGFWNKALRLYYQ-MQRTGINPDKLVFLSVIKACGSQSDLQAGRKV 142
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
H I+ G + D + + L MY+KCG++ A +F +RD+V +N +IA Y+ +G
Sbjct: 143 HEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQP 202
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC 534
+A+ LF EM GIKP++ T V+++ H ++E G K + I +
Sbjct: 203 YEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQG-KQIHCYAIRSGIESDVLVVNG 261
Query: 535 MIDLYGRANQLEKAIEFMKSIPTEE----DAVILGSFLN 569
++++Y + + A + + +P + +A+I G LN
Sbjct: 262 LVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLN 300
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 361 bits (926), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 205/619 (33%), Positives = 343/619 (55%), Gaps = 44/619 (7%)
Query: 54 RNVFSWNTIISACI-----KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADAL 108
RN+ + + I+ + + K +++A +F S ++ V+YN++L GY+ EG +AL
Sbjct: 405 RNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQ-EGKAEEAL 463
Query: 109 KLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLID 168
+L+ +MQS D I+ D+FT T+ L LC N GRQ+HA +++ + + + L+
Sbjct: 464 ELYHDMQSED-GIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVH 522
Query: 169 MYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWN 228
MYS+C G + A + F R E N A SWN
Sbjct: 523 MYSEC--------------------------------GRLNYAKEIFNRMAERN-AYSWN 549
Query: 229 TLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKN 288
++I GY QNG+ +E L+LF +M NG++ + + +S LS+C L + + +E+H+++++N
Sbjct: 550 SMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRN 609
Query: 289 GLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHF 348
+ + +VD+Y KC +M+YA + ++ + M+ + G +A+ F
Sbjct: 610 TMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLF 669
Query: 349 DSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAAL 408
D + ++N +W ++ +GY + F+ E + + + D L +V ++ C+ AL
Sbjct: 670 DQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESD-IEYDVLTMVTIVNLCSSLPAL 728
Query: 409 HPGKEIHAYILRMG-VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIAC 467
G ++H+ I++ G V L + LVDMYSKCG +T A +F N +++V +N MI+
Sbjct: 729 EHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISG 788
Query: 468 YAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISP 527
Y+ HG ++A++L+EEM +KG+ P+ VTF+AILSA H G VE G + F SM DY I
Sbjct: 789 YSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEA 848
Query: 528 ETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKL 587
+ +HY CM+DL GRA +LE A EF++ +P E + G+ L CR++++ ++ A ++L
Sbjct: 849 KAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRL 908
Query: 588 LRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKG-NRFAGCSWVYVEHEIHIFTV 646
L+ N YV ++N+YAA G W E+ IR+ M+ MKG + G SW+ + EI IF
Sbjct: 909 FELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMK-MKGVKKDPGVSWIEINSEIQIFHA 967
Query: 647 GDVSHPKTNAIYSVLAIFT 665
G +HPKT IY+ L T
Sbjct: 968 GSKTHPKTEEIYNNLRHLT 986
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 160/650 (24%), Positives = 273/650 (42%), Gaps = 144/650 (22%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRE---SRKLFDEMPERNVFSWNT-------- 61
H Q I G +++ +Y++ L + +RKLF+EMPERN+ +WNT
Sbjct: 94 HTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILAYARV 153
Query: 62 ---------------------------IISACIKSHDLKQARSL---------------- 78
+I ACI D+ R L
Sbjct: 154 DDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVG 213
Query: 79 -------------------FDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
D +VT+N+++ GY+ +E +A +F M
Sbjct: 214 GALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWE-EAWGIFDRMLKIG- 271
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
+ D FT S L +C L + G+Q+H+ ++ F ++LIDMY+KC E
Sbjct: 272 -VCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESC 330
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
+VF+ E + V+WN++IS Q G
Sbjct: 331 LKVFDEMGER---------------------------------NQVTWNSIISAEAQFGH 357
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
+ L LF+RM E+G + N S L A GL ++ +E+H +++N L S+ + S
Sbjct: 358 FNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSA 417
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
+VD+Y KC G +EEA + F SL E+N V +
Sbjct: 418 LVDMYSKC-------------------------------GMVEEAHQVFRSLLERNEVSY 446
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
AL +GYV+ E +L + +++G+ D LL CA Q + G++IHA+++
Sbjct: 447 NALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLI 506
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
R + + + + LV MYS+CG + YA+ IF ER+ +N MI Y +G ++A+
Sbjct: 507 RANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALR 566
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
LF++M GIKPD + ++LS+ + G + N + + + E ++D+Y
Sbjct: 567 LFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRN-TMEEEGILQVVLVDMY 625
Query: 540 GRANQLEKAIEFMKSIPTEE---DAVILGSFLNVCRLNRNAELAGEAEEK 586
+ ++ A + ++ + V++ +F+N R N L + E++
Sbjct: 626 AKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQR 675
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 123/227 (54%), Gaps = 8/227 (3%)
Query: 31 LIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTY 90
L+ +Y+K + + K++D+ +++V N ++SA + S A++LFD ++ +
Sbjct: 621 LVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALW 680
Query: 91 NSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAF 150
NS+L GY N +G + ++ F+EM +D I D T+ + +NLC L + G QLH+
Sbjct: 681 NSILAGYAN-KGLKKESFNHFLEMLESD--IEYDVLTMVTIVNLCSSLPALEHGDQLHSL 737
Query: 151 MVKTS-NDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEME 209
++K + S ++L+DMYSKC +A VF+ + N++S NAM++ + G +
Sbjct: 738 IIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGK-NIVSWNAMISGYSKHGCSK 796
Query: 210 MALKTFWRQPE---LNDAVSWNTLISGYVQNGDAEEGLKLFVRMGEN 253
AL + P+ + V++ ++S G EEGL++F M E+
Sbjct: 797 EALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQED 843
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 13 HVQAIKAG-LTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHD 71
H IK G + + + L+ +YSK + ++R +FD M +N+ SWN +IS K
Sbjct: 735 HSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGC 794
Query: 72 LKQARSLFDSSPHKDL----VTYNSMLCGYINAEGYEADALKLFIEMQ 115
K+A L++ P K + VT+ ++L + G + L++F MQ
Sbjct: 795 SKEALILYEEMPKKGMYPNEVTFLAILSA-CSHTGLVEEGLRIFTSMQ 841
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 206/646 (31%), Positives = 337/646 (52%), Gaps = 36/646 (5%)
Query: 25 TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPH 84
T N L+ Y+K L +R++FDEMP+ N+F+ N ++SA S + LF S P
Sbjct: 48 TFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPE 107
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
+D V+YN+++ G+ ++ G A +++L+ + +E +R T+++ + + L + G
Sbjct: 108 RDAVSYNALITGF-SSTGSPARSVQLYRALLR-EESVRPTRITLSAMIMVASALSDRALG 165
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
+H +++ A F S L+DMY+K +A RVF+ E ++ N ++ R
Sbjct: 166 HSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQE-MEAKTVVMYNTLITGLLR 224
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFAS 264
+E A F + D+++W T+++G QNG E L +F RM GV +++TF S
Sbjct: 225 CKMIEDAKGLFQLMVD-RDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGS 283
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
L+AC L ++ K+IH+++ + N FV S +VD+Y KC ++ AE++
Sbjct: 284 ILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAV-------- 335
Query: 325 SFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVT 384
F +T +N++ WTA+ GY + E SE +
Sbjct: 336 -----------------------FRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSE-MQ 371
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
+G+ D L ++ +CA A+L G + H L G+ + + LV +Y KCG++
Sbjct: 372 MDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIE 431
Query: 445 YAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR 504
A +F D V + ++ YA G ++ I LFE+ML G+KPD VTF+ +LSA
Sbjct: 432 DAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACS 491
Query: 505 HCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVIL 564
G VE G YF+SM D+ I P DHY CMIDLY R+ + ++A EF+K +P DA
Sbjct: 492 RAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGW 551
Query: 565 GSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGM 624
+ L+ CRL N E+ A E LL + N A YV L +++AA+G W E+ +R+ MR
Sbjct: 552 ATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDR 611
Query: 625 KGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYE 670
+ + GCSW+ ++++HIF+ D SHP ++ IY L ++ E
Sbjct: 612 QVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAE 657
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 206/441 (46%), Gaps = 79/441 (17%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H Q ++ G + L+ +Y+K L+R++R++F EM + V +NT+I+ ++ +
Sbjct: 169 HCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMI 228
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+ A+ LF +D +T+ +M+ G + G + +AL +F M++ E + +D++T S L
Sbjct: 229 EDAKGLFQLMVDRDSITWTTMVTG-LTQNGLQLEALDVFRRMRA--EGVGIDQYTFGSIL 285
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C L + G+Q+HA++ +T + + F S+L+DMYSKCR A VF T
Sbjct: 286 TACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMT----- 340
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
CR + +SW +I GY QN +EE ++ F M
Sbjct: 341 ----------CR------------------NIISWTAMIVGYGQNACSEEAVRAFSEMQM 372
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+G++ ++ T S +S+C L +++ + H L +GL+ VS+ +V +Y KC
Sbjct: 373 DGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKC----- 427
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G++E+A R FD ++ + V WTAL +GY +
Sbjct: 428 --------------------------GSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKA 461
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI-- 430
+ DL + + G+ D + + +L AC+ + G + Y M Q D ++
Sbjct: 462 KETIDLFEKMLAN-GLKPDGVTFIGVLSACSRAGLVEKGCD---YFDSM--QKDHGIVPI 515
Query: 431 ----STLVDMYSKCGNMTYAE 447
+ ++D+YS+ G AE
Sbjct: 516 DDHYTCMIDLYSRSGRFKEAE 536
Score = 39.3 bits (90), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 38/76 (50%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L+E H A+ +GL +N L+ +Y K + ++ +LFDEM + SW +++
Sbjct: 394 SLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVT 453
Query: 65 ACIKSHDLKQARSLFD 80
+ K+ LF+
Sbjct: 454 GYAQFGKAKETIDLFE 469
>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
Length = 742
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 206/646 (31%), Positives = 337/646 (52%), Gaps = 36/646 (5%)
Query: 25 TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPH 84
T N L+ Y+K L +R++FDEMP+ N+F+ N ++SA S + LF S P
Sbjct: 48 TFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPE 107
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
+D V+YN+++ G+ ++ G A +++L+ + +E +R T+++ + + L + G
Sbjct: 108 RDAVSYNALITGF-SSTGSPARSVQLYRALLR-EESVRPTRITLSAMIMVASALSDRALG 165
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
+H +++ A F S L+DMY+K +A RVF+ E ++ N ++ R
Sbjct: 166 HSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQE-MEAKTVVMYNTLITGLLR 224
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFAS 264
+E A F + D+++W T+++G QNG E L +F RM GV +++TF S
Sbjct: 225 CKMIEDAKGLFQLMVD-RDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGS 283
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
L+AC L ++ K+IH+++ + N FV S +VD+Y KC ++ AE++
Sbjct: 284 ILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAV-------- 335
Query: 325 SFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVT 384
F +T +N++ WTA+ GY + E SE +
Sbjct: 336 -----------------------FRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSE-MQ 371
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
+G+ D L ++ +CA A+L G + H L G+ + + LV +Y KCG++
Sbjct: 372 MDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIE 431
Query: 445 YAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR 504
A +F D V + ++ YA G ++ I LFE+ML G+KPD VTF+ +LSA
Sbjct: 432 DAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACS 491
Query: 505 HCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVIL 564
G VE G YF+SM D+ I P DHY CMIDLY R+ + ++A EF+K +P DA
Sbjct: 492 RAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGW 551
Query: 565 GSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGM 624
+ L+ CRL N E+ A E LL + N A YV L +++AA+G W E+ +R+ MR
Sbjct: 552 ATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDR 611
Query: 625 KGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYE 670
+ + GCSW+ ++++HIF+ D SHP ++ IY L ++ E
Sbjct: 612 QVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAE 657
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 206/441 (46%), Gaps = 79/441 (17%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H Q ++ G + L+ +Y+K L+R++R++F EM + V +NT+I+ ++ +
Sbjct: 169 HCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMI 228
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+ A+ LF +D +T+ +M+ G + G + +AL +F M++ E + +D++T S L
Sbjct: 229 EDAKGLFQLMVDRDSITWTTMVTG-LTQNGLQLEALDVFRRMRA--EGVGIDQYTFGSIL 285
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C L + G+Q+HA++ +T + + F S+L+DMYSKCR A VF T
Sbjct: 286 TACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMT----- 340
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
CR + +SW +I GY QN +EE ++ F M
Sbjct: 341 ----------CR------------------NIISWTAMIVGYGQNACSEEAVRAFSEMQM 372
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+G++ ++ T S +S+C L +++ + H L +GL+ VS+ +V +Y KC
Sbjct: 373 DGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKC----- 427
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G++E+A R FD ++ + V WTAL +GY +
Sbjct: 428 --------------------------GSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKA 461
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI-- 430
+ DL + + G+ D + + +L AC+ + G + Y M Q D ++
Sbjct: 462 KETIDLFEKMLAN-GLKPDGVTFIGVLSACSRAGLVEKGCD---YFDSM--QKDHGIVPI 515
Query: 431 ----STLVDMYSKCGNMTYAE 447
+ ++D+YS+ G AE
Sbjct: 516 DDHYTCMIDLYSRSGRFKEAE 536
Score = 38.9 bits (89), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 38/76 (50%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L+E H A+ +GL +N L+ +Y K + ++ +LFDEM + SW +++
Sbjct: 394 SLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVT 453
Query: 65 ACIKSHDLKQARSLFD 80
+ K+ LF+
Sbjct: 454 GYAQFGKAKETIDLFE 469
>gi|357436395|ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477521|gb|AES58724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 827
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 203/664 (30%), Positives = 357/664 (53%), Gaps = 17/664 (2%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K G N LI +Y K L E++K+ + M +++ SWN+II+AC+ + +
Sbjct: 157 HGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITACVANGVV 216
Query: 73 KQARSLFD----SSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
+A L + S ++VT+++++ G+ ++ Y+ ++++LF M A + D T+
Sbjct: 217 YEALDLLENMLLSELEPNVVTWSAVIGGF-SSNAYDVESVELFARMVGAG--VAPDARTL 273
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE 188
S L C ++ + G++LH ++V+ ++GF ++L+ MY +C + A ++F
Sbjct: 274 ASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGDMKSAFKIFSKFAR 333
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELN---DAVSWNTLISGYVQNGDAEEGLK 245
+ S N M+ G + A + F++ + D +SWN +ISG+V N ++ L
Sbjct: 334 KCA-ASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDALM 392
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
LF + G+ + T S L+ + ++ KEIHS + GL SN FV +V++YC
Sbjct: 393 LFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGALVEMYC 452
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT----EKNVVVWTA 361
KC ++ A+ R++ + +++I GY+ + + R + + E NV W +
Sbjct: 453 KCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPNVYTWNS 512
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+ +G V+ + + L +E + D + I+L AC+ A +H GK++HAY +R
Sbjct: 513 ILAGLVENKQYDLAMQLFNEMQVSS-LRPDIYTVGIILAACSKLATIHRGKQVHAYSIRA 571
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
G D + +TLVDMY+KCG++ + ++ +LV +N M+ YA HGH E+ I++F
Sbjct: 572 GYDSDAHIGATLVDMYAKCGSIKHCYQVYNKISNPNLVCHNAMLTAYAMHGHGEEGIVIF 631
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGR 541
ML+ ++PD VTF+++LS+ H GS+++G + F M Y I+P HY CM+DL R
Sbjct: 632 RRMLDSRVRPDHVTFLSVLSSCVHAGSIKIGYECFYLMET-YNITPTLKHYTCMVDLLSR 690
Query: 542 ANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQL 601
A +L++A + +K++P E D+V + L C +++ L A EKL+ LE +N YV L
Sbjct: 691 AGKLDEAYQLIKNMPMEADSVTWSALLGGCFIHKEVALGEIAAEKLIELEPSNTGNYVLL 750
Query: 602 ANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
AN+YA+ G W ++ + R+ M + GCSW+ +HIF D SH + IY +L
Sbjct: 751 ANLYASAGRWHDLAKTRELMNDKGMQKSPGCSWIEDRDGVHIFLASDKSHQRVEEIYFML 810
Query: 662 AIFT 665
T
Sbjct: 811 DNLT 814
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 145/527 (27%), Positives = 251/527 (47%), Gaps = 49/527 (9%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTI 62
SL L + L H +IK G +L+ +YS ++ ++ +FD+M +N+ SW +
Sbjct: 46 SLTLGKQL--HSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHMFDKMTLKNLHSWTAV 103
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
+ L LF +K + + LC + +
Sbjct: 104 LR-------LHLNMGLF----YKGFMLFEEFLCDGLGE---------------------K 131
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
+D F LN+C L ++ GRQ+H ++K + + ++LIDMY KC +EA +V
Sbjct: 132 LDFFVFPVVLNICCGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKV 191
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQ--PELN-DAVSWNTLISGYVQNGD 239
EG T++ + +S N+++ AC G + AL EL + V+W+ +I G+ N
Sbjct: 192 LEGMTQK-DCVSWNSIITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAY 250
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
E ++LF RM GV + T AS L AC ++ + KE+H +++++ L SN FV++
Sbjct: 251 DVESVELFARMVGAGVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANA 310
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL----TEKN 355
+V +Y +C +M A + + + S ++MIVGY GN+ +A+ F + E++
Sbjct: 311 LVGMYRRCGDMKSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERD 370
Query: 356 VVVWTALFSGYVKAQNCEALFD---LLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
+ W + SG+V +FD +L + EG+ D+ L +L A + GK
Sbjct: 371 RISWNCMISGHVD----NFMFDDALMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGK 426
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
EIH+ + G+Q + + LV+MY KC ++ A++ F ERD +N +I+ YA
Sbjct: 427 EIHSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCN 486
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSM 519
K L E M G +P+ T+ +IL+ ++ + FN M
Sbjct: 487 QIGKIRELVERMKSDGFEPNVYTWNSILAGLVENKQYDLAMQLFNEM 533
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 190/612 (31%), Positives = 336/612 (54%), Gaps = 36/612 (5%)
Query: 46 KLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEA 105
K F ++ VF N++++ KS+ + A LF+S P +D+V++N M+ ++ G
Sbjct: 218 KQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWN-MMVSALSQSGRAR 276
Query: 106 DALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS 165
+AL + ++M + +R+D T TS+L C KL ++G+G+QLHA ++++ + S+
Sbjct: 277 EALSVAVDMH--NRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASA 334
Query: 166 LIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAV 225
++++Y+KC C++EA RVF + + V
Sbjct: 335 MVELYAKCGCFKEARRVFSSLRDR---------------------------------NTV 361
Query: 226 SWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWV 285
SW LI G++Q G E L+LF +M + ++ A+ +S C ++ A+++HS
Sbjct: 362 SWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLS 421
Query: 286 LKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEAR 345
LK+G +S+ ++ +Y KC N+ AES+ R+ S + M+ YS GN+ +AR
Sbjct: 422 LKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAR 481
Query: 346 RHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQ 405
FD ++ +NV+ W A+ Y++ E + S +T++ V+ D + V L CA
Sbjct: 482 EFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADM 541
Query: 406 AALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMI 465
A G +I + +++G+ +D +++ ++ MYSKCG ++ A IF +DLV +N MI
Sbjct: 542 GANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVSWNAMI 601
Query: 466 ACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKI 525
Y+ HG ++AI +F++ML+KG KPD +++VA+LS+ H G V+ G+ YF+ + D+ +
Sbjct: 602 TGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEGKFYFDMLKRDHNV 661
Query: 526 SPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEE 585
SP +H++CM+DL RA L +A + +P + A + G+ L+ C+ + N ELA A +
Sbjct: 662 SPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNELAELAAK 721
Query: 586 KLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFT 645
L L+ + Y+ LA +YA G + ++RK MR + G SW+ V++++H+F
Sbjct: 722 HLFDLDSPDSGGYMLLAKIYADAGKSVDSAQVRKLMRDKGIKKNPGYSWMEVKNKVHVFK 781
Query: 646 VGDVSHPKTNAI 657
DVSHP+ AI
Sbjct: 782 AEDVSHPQVIAI 793
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 137/524 (26%), Positives = 251/524 (47%), Gaps = 41/524 (7%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLF-DEMPERNVFSWNTIISACIKSHD 71
H + + GL N L+H Y L ++R L ++ E NV + N +++ K
Sbjct: 51 HGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDITEPNVITHNIMMNGYAKLGS 110
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
L A LF P +D+ ++N+++ GY + G DA++ F+ M+ + + + + FT
Sbjct: 111 LSDAEELFGRMPRRDVTSWNTLMSGYYQS-GRFLDAMESFVSMRRSGDSLP-NAFTFGCA 168
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
+ C L QL + K + ++DM+ +C + A + F E
Sbjct: 169 MKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQ-IERPT 227
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
+ +N+M+A + ++ AL+ F PE D VSWN ++S Q+G A E L + V M
Sbjct: 228 VFCRNSMLAGYAKSYGVDHALELFESMPE-RDVVSWNMMVSALSQSGRAREALSVAVDMH 286
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
GVR + T+ S+L+AC L ++ K++H+ V+++ +P+V+S +V++Y KC
Sbjct: 287 NRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKC---- 342
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
G +EARR F SL ++N V WT L G+++
Sbjct: 343 ---------------------------GCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGC 375
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
+L ++ + E + D L ++ C+ + + +++H+ L+ G + +
Sbjct: 376 FSESLELFNQ-MRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISN 434
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
+L+ MY+KCGN+ AE IF + ERD+V + M+ Y+ G+ KA F+ M + +
Sbjct: 435 SLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNV-- 492
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACM 535
+T+ A+L A+ G+ E G K +++M + + P+ Y +
Sbjct: 493 --ITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTL 534
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 15 QAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQ 74
+K GL L T N +I +YSK + E+RK+FD + +++ SWN +I+ + KQ
Sbjct: 553 HTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQ 612
Query: 75 ARSLFDSSPHK----DLVTYNSML 94
A +FD K D ++Y ++L
Sbjct: 613 AIEIFDDMLKKGAKPDYISYVAVL 636
>gi|357518009|ref|XP_003629293.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355523315|gb|AET03769.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 672
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 214/665 (32%), Positives = 350/665 (52%), Gaps = 39/665 (5%)
Query: 6 LKEALICHVQAIKAG-LTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
++EA H+ +K G L + ITTN+L+ +YS+ L ++ KLFDEMP+ N FSWNT+I
Sbjct: 10 IREARQLHLSLLKTGNLHSSVITTNRLLQLYSRRGSLHDASKLFDEMPQPNPFSWNTLIE 69
Query: 65 ACI-------------------------------KSHDLKQARSLFDSSPHKDLVTYNSM 93
A I KS DL+QA++LF++ P K+ + +NSM
Sbjct: 70 AHINLGHRNKSLELFHAMPHKTHYSWNLIVSTLSKSGDLQQAQALFNAMPMKNPLVWNSM 129
Query: 94 LCGYINAEGYEADALKLFIEMQ-SADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHA--F 150
+ GY + GY ++L LF EM E + D F +++ C L + G+Q+HA F
Sbjct: 130 IHGY-SRHGYPRNSLLLFKEMNLDPLETVHRDAFVLSTVFGACADLFALDCGKQVHARVF 188
Query: 151 MVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEM 210
+ + SS+++ Y KC + A RV G +EV+ S +A+V+ G M
Sbjct: 189 IDGFEFEQDKVLCSSIVNFYGKCGDLDSAARVV-GFVKEVDDFSLSALVSGYANAGRMSD 247
Query: 211 ALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACC 270
A K F + + +V WN++ISGYV NG+ E L LF +M NGV + A+ LS
Sbjct: 248 ARKVFDNKVDPC-SVLWNSIISGYVSNGEEMEALALFNKMRRNGVWGDFSAVANILSISS 306
Query: 271 GLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISS 330
L NV+ K++H K G + V+S ++D Y KC++ + + + V ++ +++
Sbjct: 307 SLLNVELVKQMHDHAFKIGATHDIVVASTLLDAYSKCQHPHDSCKLFHELKVYDAILLNT 366
Query: 331 MIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVT 390
MI Y G +E+A+ F+S+ K ++ W ++ G + D S + K V
Sbjct: 367 MITVYCNCGRVEDAKEVFNSMPNKTLISWNSILVGLTQNACPSEALDTFS-MMNKLDVKM 425
Query: 391 DALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIF 450
D ++ ACA++++L G+++ + +G++ D+ + ++LVD Y KCG + +F
Sbjct: 426 DKFSFASVISACAIKSSLELGEQLFGKAITLGLESDQIICTSLVDFYCKCGLVEMGRKVF 485
Query: 451 QNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVE 510
I+ D V +N M+ YA +G+ +A+ LF EM G++P A+TF ILSA HCG VE
Sbjct: 486 DGMIKTDEVSWNTMLMGYATNGYGIEALTLFNEMGYSGVRPSAITFTGILSACDHCGLVE 545
Query: 511 MGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNV 570
G F +M DY I+P +HY+CM+DL+ R +A+ ++ +P + DA + S L
Sbjct: 546 EGRDLFRTMKHDYDINPGIEHYSCMVDLFARVGCFGEAMYLIEEMPFQADANMWLSVLRG 605
Query: 571 CRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFA 630
C + N + A EK+++L+ N Y+QL+N+ A +W +R+ MR +
Sbjct: 606 CVSHGNKTIGKMAAEKIIQLDPGNSGAYIQLSNILATSEDWEGSAEVRELMRNKNVQKIP 665
Query: 631 GCSWV 635
GCSW+
Sbjct: 666 GCSWM 670
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 125/271 (46%), Gaps = 38/271 (14%)
Query: 4 LNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
LN++ H A K G T + + L+ YSK +S KLF E+ + NT+I
Sbjct: 309 LNVELVKQMHDHAFKIGATHDIVVASTLLDAYSKCQHPHDSCKLFHELKVYDAILLNTMI 368
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
+ ++ A+ +F+S P+K L+++NS+L G + ++AL F M D ++M
Sbjct: 369 TVYCNCGRVEDAKEVFNSMPNKTLISWNSILVG-LTQNACPSEALDTFSMMNKLD--VKM 425
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
D+F+ S ++ C ++ G QL + ++ +SL+D Y KC E +VF
Sbjct: 426 DKFSFASVISACAIKSSLELGEQLFGKAITLGLESDQIICTSLVDFYCKCGLVEMGRKVF 485
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
+G +KT D VSWNT++ GY NG E
Sbjct: 486 DG-------------------------MIKT--------DEVSWNTMLMGYATNGYGIEA 512
Query: 244 LKLFVRMGENGVRWNEHTFASALSAC--CGL 272
L LF MG +GVR + TF LSAC CGL
Sbjct: 513 LTLFNEMGYSGVRPSAITFTGILSACDHCGL 543
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 118/499 (23%), Positives = 198/499 (39%), Gaps = 112/499 (22%)
Query: 167 IDMYSKCRCYEEACRVFEGCTEEVNL----ISKNAMVAACCREGEMEMALKTFWRQPELN 222
++++S CR EA ++ + NL I+ N ++ R G + A K F P+ N
Sbjct: 1 MELHSVCRTIREARQLHLSLLKTGNLHSSVITTNRLLQLYSRRGSLHDASKLFDEMPQPN 60
Query: 223 DAVSWNTLISGYVQNGDAEEGLKLFVRMG------------------------------- 251
SWNTLI ++ G + L+LF M
Sbjct: 61 -PFSWNTLIEAHINLGHRNKSLELFHAMPHKTHYSWNLIVSTLSKSGDLQQAQALFNAMP 119
Query: 252 -ENGVRWNE-----------------------------HTFASALSACCG----LRNVKC 277
+N + WN H A LS G L + C
Sbjct: 120 MKNPLVWNSMIHGYSRHGYPRNSLLLFKEMNLDPLETVHRDAFVLSTVFGACADLFALDC 179
Query: 278 AKEIHSWVLKNG--LISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGY 335
K++H+ V +G + + S IV+ Y KC +++ A ++ + FS+S+++ GY
Sbjct: 180 GKQVHARVFIDGFEFEQDKVLCSSIVNFYGKCGDLDSAARVVGFVKEVDDFSLSALVSGY 239
Query: 336 SLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK-AQNCEALFDLLSEFVTKEGVVTDALI 394
+ G M +AR+ FD+ + V+W ++ SGYV + EAL L + + GV D
Sbjct: 240 ANAGRMSDARKVFDNKVDPCSVLWNSIISGYVSNGEEMEAL--ALFNKMRRNGVWGDFSA 297
Query: 395 LVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFI 454
+ +L + + K++H + ++G D + STL+D YSKC + + +F
Sbjct: 298 VANILSISSSLLNVELVKQMHDHAFKIGATHDIVVASTLLDAYSKCQHPHDSCKLFHELK 357
Query: 455 ERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK--------------------------- 487
D +L N MI Y + G E A +F M K
Sbjct: 358 VYDAILLNTMITVYCNCGRVEDAKEVFNSMPNKTLISWNSILVGLTQNACPSEALDTFSM 417
Query: 488 ----GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC--MIDLYGR 541
+K D +F +++SA S+E+GE+ F + E+D C ++D Y +
Sbjct: 418 MNKLDVKMDKFSFASVISACAIKSSLELGEQLFGKAIT---LGLESDQIICTSLVDFYCK 474
Query: 542 ANQLEKAIE-FMKSIPTEE 559
+E + F I T+E
Sbjct: 475 CGLVEMGRKVFDGMIKTDE 493
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 206/646 (31%), Positives = 336/646 (52%), Gaps = 36/646 (5%)
Query: 25 TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPH 84
T N L+ Y+K L +R++FDEMP+ N+F+ N ++SA S + LF S P
Sbjct: 48 TFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPE 107
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
+D V+YN+++ G+ ++ G A +++L+ + +E +R T+++ + + L + G
Sbjct: 108 RDAVSYNALITGF-SSTGSPARSVQLYRALLR-EESVRPTRITLSAMIMVASALSDRALG 165
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
+H +++ A F S L+DMY+K +A RVF+ E ++ N ++ R
Sbjct: 166 HSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQE-MEAKTVVMYNTLITGLLR 224
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFAS 264
+E A F + D+++W T+++G QNG E L +F RM GV +++TF S
Sbjct: 225 CKMIEDAKGLFQLMVD-RDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGS 283
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
L+AC L + K+IH+++ + N FV S +VD+Y KC ++ AE++
Sbjct: 284 ILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAV-------- 335
Query: 325 SFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVT 384
F +T +N++ WTA+ GY + E SE +
Sbjct: 336 -----------------------FRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSE-MQ 371
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
+G+ D L ++ +CA A+L G + H L G+ + + LV +Y KCG++
Sbjct: 372 MDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIE 431
Query: 445 YAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR 504
A +F D V + ++ YA G ++ I LFE+ML G+KPD VTF+ +LSA
Sbjct: 432 DAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACS 491
Query: 505 HCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVIL 564
G VE G YF+SM D+ I P DHY CMIDLY R+ + ++A EF+K +P DA
Sbjct: 492 RAGLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGW 551
Query: 565 GSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGM 624
+ L+ CRL N E+ A E LL + N A YV L +++AA+G W E+ +R+ MR
Sbjct: 552 ATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDR 611
Query: 625 KGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYE 670
+ + GCSW+ ++++HIF+ D SHP ++ IY L ++ E
Sbjct: 612 QVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAE 657
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 205/441 (46%), Gaps = 79/441 (17%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H Q ++ G + L+ +Y+K L+R++R++F EM + V +NT+I+ ++ +
Sbjct: 169 HCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMI 228
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+ A+ LF +D +T+ +M+ G + G + +AL +F M++ E + +D++T S L
Sbjct: 229 EDAKGLFQLMVDRDSITWTTMVTG-LTQNGLQLEALDVFRRMRA--EGVGIDQYTFGSIL 285
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C L G+Q+HA++ +T + + F S+L+DMYSKCR A VF T
Sbjct: 286 TACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMT----- 340
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
CR + +SW +I GY QN +EE ++ F M
Sbjct: 341 ----------CR------------------NIISWTAMIVGYGQNACSEEAVRAFSEMQM 372
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+G++ ++ T S +S+C L +++ + H L +GL+ VS+ +V +Y KC
Sbjct: 373 DGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKC----- 427
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G++E+A R FD ++ + V WTAL +GY +
Sbjct: 428 --------------------------GSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKA 461
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI-- 430
+ DL + + G+ D + + +L AC+ + G + Y M Q D ++
Sbjct: 462 KETIDLFEKMLVN-GLKPDGVTFIGVLSACSRAGLVEKGCD---YFDSM--QKDHDIVPI 515
Query: 431 ----STLVDMYSKCGNMTYAE 447
+ ++D+YS+ G AE
Sbjct: 516 DDHYTCMIDLYSRSGRFKEAE 536
Score = 39.7 bits (91), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 75/174 (43%), Gaps = 12/174 (6%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L+E H A+ +GL +N L+ +Y K + ++ +LFDEM + SW +++
Sbjct: 394 SLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVT 453
Query: 65 ACIKSHDLKQARSLFD----SSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
+ K+ LF+ + D VT+ +L A G F MQ +
Sbjct: 454 GYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRA-GLVEKGCDYFDSMQKDHDI 512
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
+ +D+ T ++L + G ++ F+ + + F ++L+ S CR
Sbjct: 513 VPIDDH-YTCMIDLYSR---SGRFKEAEEFIKQMPHSPDAFGWATLL---SSCR 559
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 358 bits (918), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 190/627 (30%), Positives = 344/627 (54%), Gaps = 36/627 (5%)
Query: 31 LIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTY 90
L+ ++ + + + +LF + E +F N++++ +K++ + A LFDS P +D+V++
Sbjct: 179 LVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSW 238
Query: 91 NSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAF 150
N M+ ++ G +AL + ++MQS + +R+D T TS+L C +L ++ +G+QLHA
Sbjct: 239 N-MMVSALSQSGRVREALDMVVDMQS--KGVRLDSTTYTSSLTACARLSSLRWGKQLHAQ 295
Query: 151 MVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEM 210
+++ + S+L+++Y+K C++EA VF + N
Sbjct: 296 VIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNN------------------- 336
Query: 211 ALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACC 270
V+W LISG++Q G E ++LF +M + ++ A+ +S CC
Sbjct: 337 --------------VAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCC 382
Query: 271 GLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISS 330
++ +++HS LK+G I VS+ ++ +Y KC+N+ AE++ ++ S +S
Sbjct: 383 SRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTS 442
Query: 331 MIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVT 390
MI YS GN+ +AR FD ++EKNV+ W A+ Y++ E + +++E V
Sbjct: 443 MITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRP 502
Query: 391 DALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIF 450
D + V L CA A G +I +++G+ +D + + ++ MYSKCG + A +F
Sbjct: 503 DWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVF 562
Query: 451 QNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVE 510
+D+V +N MI Y+ HG ++AI +F+++L++G KPD +++VA+LS H G V+
Sbjct: 563 DFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQ 622
Query: 511 MGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNV 570
G+ YF+ M + ISP +H++CM+DL GRA L +A + + +P + A + G+ L+
Sbjct: 623 EGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSA 682
Query: 571 CRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFA 630
C+++ N ELA A + + L+ + Y+ +A +YA G + +IRK MR +
Sbjct: 683 CKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNP 742
Query: 631 GCSWVYVEHEIHIFTVGDVSHPKTNAI 657
G SW+ V++++H+F DVSHP+ AI
Sbjct: 743 GYSWMEVDNKVHVFKADDVSHPQVLAI 769
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 142/529 (26%), Positives = 257/529 (48%), Gaps = 51/529 (9%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLF-DEMPERNVFSWNTIISACIKSHD 71
H + + GL N L+H Y L ++R+L ++ NV + N +++ K
Sbjct: 27 HGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGR 86
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
L A LF P +D+ ++N+++ GY + Y +L+ F+ M + + + FT+
Sbjct: 87 LSDAVELFGRMPARDVASWNTLMSGYFQSRQYLV-SLETFLSMHRSGDSWP-NAFTLACA 144
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
+ C L QL A + K + ++L+DM+ +C + A R+F +E
Sbjct: 145 MKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVR-IKEPT 203
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
+ +N+M+A + ++ AL+ F PE D VSWN ++S Q+G E L + V M
Sbjct: 204 MFCRNSMLAGYVKTYGVDHALELFDSMPE-RDVVSWNMMVSALSQSGRVREALDMVVDMQ 262
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
GVR + T+ S+L+AC L +++ K++H+ V++N +P+V+S +V++Y K
Sbjct: 263 SKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAK----- 317
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK--- 368
G +EA+ F+SL ++N V WT L SG+++
Sbjct: 318 --------------------------SGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGC 351
Query: 369 -AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDK 427
++ E + +E +T D L L+ C + L G+++H+ L+ G Q+
Sbjct: 352 FTESVELFNQMRAELMT-----LDQFALATLISGCCSRMDLCLGRQLHSLCLKSG-QIQA 405
Query: 428 KLIS-TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
++S +L+ MY+KC N+ AE IF+ E+D+V + MI Y+ G+ KA F+ M E
Sbjct: 406 VVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSE 465
Query: 487 KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACM 535
K + +T+ A+L A+ G+ E G + + M ++ + P+ Y +
Sbjct: 466 KNV----ITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTL 510
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 15 QAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQ 74
+ +K GL + T N +I +YSK + E+RK+FD + +++ SWN +I+ + KQ
Sbjct: 529 RTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQ 588
Query: 75 ARSLFDS----SPHKDLVTYNSMLCG 96
A +FD D ++Y ++L G
Sbjct: 589 AIEIFDDILKRGAKPDYISYVAVLSG 614
>gi|359490816|ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 702
Score = 357 bits (917), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 218/669 (32%), Positives = 345/669 (51%), Gaps = 69/669 (10%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R+LNL + + H +K G +L+ +Y + L ++ +F +MP+RN++SW
Sbjct: 73 RTLNLGKQV--HAHTLKTGFHGHEFVETKLLQMYGRFGCLDDANLVFVKMPQRNLYSWTA 130
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
I+S H D GY +AL LF ++Q D I
Sbjct: 131 ILSV------------------HVD--------------HGYFEEALSLFEKLQLDD--I 156
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
++ F L LC L + GRQLH ++K +C A +
Sbjct: 157 GLEFFVFPVVLKLCGGLRVLELGRQLHGVVIK------------------RCADMGSALK 198
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPEL--NDAVSWNTLISGYVQNGD 239
+F G + + N++S N M+ C G +E A K + Q EL D +SWN++ISGY N
Sbjct: 199 IFSGFSVK-NVVSYNTMIVGYCENGNVEKA-KELFDQMELVGKDTISWNSMISGYADNLL 256
Query: 240 AEEGLKLFVRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
+E L +F + E G+ + T S L+AC + +++ KE+H+ + GL N FV
Sbjct: 257 FDEALSMFRDLLMEEGIEADSFTLGSVLAACADMASLRRGKEVHAQAVVRGLHWNTFVGG 316
Query: 299 GIVDVYCKCENMNYAESMLLLKGV--RNSFSISSMIVGYSLQGNMEEARRHFDSLT---- 352
+V++Y KCE++ A+ L GV R++ + + +I GY+ +E + +
Sbjct: 317 ALVEMYSKCEDLKAAQ--LAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGF 374
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
E NV W + SG+V+ + E L +E T + D + I+L ACA A + GK
Sbjct: 375 EPNVYTWNGIISGHVENGHNELALRLFTEMQTSS-LRPDIYTVGIILPACARLATIARGK 433
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
++HA+ +R G ++D + + LVDMY+KCG++ +A ++ +LV N M+ YA HG
Sbjct: 434 QVHAHSIRQGYELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHG 493
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
H ++ I LF ML G +PD VTF+++LS+ H G+VE G ++F+ MT Y ++P HY
Sbjct: 494 HGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLMTY-YNVTPSLKHY 552
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
C++DL RA +L++A E +K IP + D+V+ G+ L C + N EL A E L+ LE
Sbjct: 553 TCIVDLLSRAGRLDEAYELVKKIPRKPDSVMWGALLGGCVIWGNVELGEIAAESLIELEP 612
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
NN YV LAN+YA G W ++ R R+ ++ ++ GCSW+ +IH+F D SH
Sbjct: 613 NNTGNYVLLANLYAYAGRWHDLDRTRQMIKDRGMHKSPGCSWIEDREDIHVFLSCDKSHE 672
Query: 653 KTNAIYSVL 661
KT IY+ L
Sbjct: 673 KTEDIYTTL 681
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/416 (21%), Positives = 160/416 (38%), Gaps = 126/416 (30%)
Query: 261 TFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLK 320
T+AS L +C R + K++H+ LK G + FV + ++ +Y + ++ A + +
Sbjct: 64 TYASLLESC---RTLNLGKQVHAHTLKTGFHGHEFVETKLLQMYGRFGCLDDANLVFVKM 120
Query: 321 GVRNSFSISSMI---------------------------------------------VGY 335
RN +S ++++ +G
Sbjct: 121 PQRNLYSWTAILSVHVDHGYFEEALSLFEKLQLDDIGLEFFVFPVVLKLCGGLRVLELGR 180
Query: 336 SLQG-------NMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEA---LFD-------- 377
L G +M A + F + KNVV + + GY + N E LFD
Sbjct: 181 QLHGVVIKRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQMELVGKD 240
Query: 378 ----------------------LLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIH 415
+ + + +EG+ D+ L +L ACA A+L GKE+H
Sbjct: 241 TISWNSMISGYADNLLFDEALSMFRDLLMEEGIEADSFTLGSVLAACADMASLRRGKEVH 300
Query: 416 AYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYA------ 469
A + G+ + + LV+MYSKC ++ A++ F ERD +NV+I+ YA
Sbjct: 301 AQAVVRGLHWNTFVGGALVEMYSKCEDLKAAQLAFDGVTERDTATWNVLISGYACCNQLE 360
Query: 470 -----------------------------HHGHEEKAILLFEEMLEKGIKPDAVTFVAIL 500
+GH E A+ LF EM ++PD T IL
Sbjct: 361 NIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQTSSLRPDIYTVGIIL 420
Query: 501 SAFRHCGSVEMGEK-YFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSI 555
A ++ G++ + +S+ Y++ A ++D+Y + ++ A++ I
Sbjct: 421 PACARLATIARGKQVHAHSIRQGYELDVHIG--AALVDMYAKCGSIKHAMQVYNRI 474
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 112/268 (41%), Gaps = 32/268 (11%)
Query: 391 DALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIF 450
D+ LL +C L+ GK++HA+ L+ G + + + L+ MY + G + A ++F
Sbjct: 61 DSSTYASLLESCR---TLNLGKQVHAHTLKTGFHGHEFVETKLLQMYGRFGCLDDANLVF 117
Query: 451 QNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS--------- 501
+R+L + +++ + HG+ E+A+ LFE++ I + F +L
Sbjct: 118 VKMPQRNLYSWTAILSVHVDHGYFEEALSLFEKLQLDDIGLEFFVFPVVLKLCGGLRVLE 177
Query: 502 --------AFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMK 553
+ C + K F+ + +S Y MI Y +EKA E
Sbjct: 178 LGRQLHGVVIKRCADMGSALKIFSGFSVKNVVS-----YNTMIVGYCENGNVEKAKELFD 232
Query: 554 SIP-TEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWA 612
+ +D + S ++ N + A LL EG +A L +V AA + A
Sbjct: 233 QMELVGKDTISWNSMISGYADNLLFDEALSMFRDLLMEEG-IEADSFTLGSVLAACADMA 291
Query: 613 EMGRIRK-----QMRGMKGNRFAGCSWV 635
+ R ++ +RG+ N F G + V
Sbjct: 292 SLRRGKEVHAQAVVRGLHWNTFVGGALV 319
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 190/627 (30%), Positives = 344/627 (54%), Gaps = 36/627 (5%)
Query: 31 LIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTY 90
L+ ++ + + + +LF + E +F N++++ +K++ + A LFDS P +D+V++
Sbjct: 199 LVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSW 258
Query: 91 NSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAF 150
N M+ ++ G +AL + ++MQS + +R+D T TS+L C +L ++ +G+QLHA
Sbjct: 259 N-MMVSALSQSGRVREALDMVVDMQS--KGVRLDSTTYTSSLTACARLSSLRWGKQLHAQ 315
Query: 151 MVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEM 210
+++ + S+L+++Y+K C++EA VF + N
Sbjct: 316 VIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNN------------------- 356
Query: 211 ALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACC 270
V+W LISG++Q G E ++LF +M + ++ A+ +S CC
Sbjct: 357 --------------VAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCC 402
Query: 271 GLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISS 330
++ +++HS LK+G I VS+ ++ +Y KC+N+ AE++ ++ S +S
Sbjct: 403 SRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTS 462
Query: 331 MIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVT 390
MI YS GN+ +AR FD ++EKNV+ W A+ Y++ E + +++E V
Sbjct: 463 MITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRP 522
Query: 391 DALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIF 450
D + V L CA A G +I +++G+ +D + + ++ MYSKCG + A +F
Sbjct: 523 DWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVF 582
Query: 451 QNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVE 510
+D+V +N MI Y+ HG ++AI +F+++L++G KPD +++VA+LS H G V+
Sbjct: 583 DFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQ 642
Query: 511 MGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNV 570
G+ YF+ M + ISP +H++CM+DL GRA L +A + + +P + A + G+ L+
Sbjct: 643 EGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSA 702
Query: 571 CRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFA 630
C+++ N ELA A + + L+ + Y+ +A +YA G + +IRK MR +
Sbjct: 703 CKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNP 762
Query: 631 GCSWVYVEHEIHIFTVGDVSHPKTNAI 657
G SW+ V++++H+F DVSHP+ AI
Sbjct: 763 GYSWMEVDNKVHVFKADDVSHPQVLAI 789
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 142/529 (26%), Positives = 257/529 (48%), Gaps = 51/529 (9%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLF-DEMPERNVFSWNTIISACIKSHD 71
H + + GL N L+H Y L ++R+L ++ NV + N +++ K
Sbjct: 47 HGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGR 106
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
L A LF P +D+ ++N+++ GY + Y +L+ F+ M + + + FT+
Sbjct: 107 LSDAVELFGRMPARDVASWNTLMSGYFQSRQYLV-SLETFLSMHRSGDSWP-NAFTLACA 164
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
+ C L QL A + K + ++L+DM+ +C + A R+F +E
Sbjct: 165 MKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVR-IKEPT 223
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
+ +N+M+A + ++ AL+ F PE D VSWN ++S Q+G E L + V M
Sbjct: 224 MFCRNSMLAGYVKTYGVDHALELFDSMPE-RDVVSWNMMVSALSQSGRVREALDMVVDMQ 282
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
GVR + T+ S+L+AC L +++ K++H+ V++N +P+V+S +V++Y K
Sbjct: 283 SKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAK----- 337
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK--- 368
G +EA+ F+SL ++N V WT L SG+++
Sbjct: 338 --------------------------SGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGC 371
Query: 369 -AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDK 427
++ E + +E +T D L L+ C + L G+++H+ L+ G Q+
Sbjct: 372 FTESVELFNQMRAELMT-----LDQFALATLISGCCSRMDLCLGRQLHSLCLKSG-QIQA 425
Query: 428 KLIS-TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
++S +L+ MY+KC N+ AE IF+ E+D+V + MI Y+ G+ KA F+ M E
Sbjct: 426 VVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSE 485
Query: 487 KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACM 535
K + +T+ A+L A+ G+ E G + + M ++ + P+ Y +
Sbjct: 486 KNV----ITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTL 530
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 15 QAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQ 74
+ +K GL + T N +I +YSK + E+RK+FD + +++ SWN +I+ + KQ
Sbjct: 549 RTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQ 608
Query: 75 ARSLFDS----SPHKDLVTYNSMLCG 96
A +FD D ++Y ++L G
Sbjct: 609 AIEIFDDILKRGAKPDYISYVAVLSG 634
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 197/656 (30%), Positives = 356/656 (54%), Gaps = 40/656 (6%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
RSL L+ L+ VQ K G + L+ ++ + + + +LF + E +F N+
Sbjct: 154 RSLALQ--LLGMVQ--KFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFCRNS 209
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
++ +K++ + A LFDS P +D+V++N M+ ++ G +AL + ++MQS + +
Sbjct: 210 MLVGYVKTYGVDHALELFDSMPERDVVSWN-MMVSALSQSGRVREALDMVVDMQS--KGV 266
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
R+D T TS+L C +L ++ +G+QLHA +++ + S+L+++Y+KC C++EA
Sbjct: 267 RLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKG 326
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
VF + N V+W LI+G++Q+G
Sbjct: 327 VFNSLHDRNN---------------------------------VAWTVLIAGFLQHGCFT 353
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E ++LF +M + ++ A+ +S CC ++ +++HS LK+G I VS+ ++
Sbjct: 354 ESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLI 413
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
+Y KC+N+ AES+ ++ S +SMI +S GN+ +AR FD ++ KNV+ W A
Sbjct: 414 SMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNA 473
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+ Y++ E + + ++++ V D + V L CA A G +I +++
Sbjct: 474 MLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKV 533
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
G+ +D + + ++ MYSKCG + A +F +D+V +N MI Y+ HG ++AI +F
Sbjct: 534 GLILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIF 593
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGR 541
+++L++G KPD +++VA+LS H G V+ G+ YF+ M + ISP +H++CM+DL GR
Sbjct: 594 DDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGR 653
Query: 542 ANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQL 601
A L +A + + +P + A + G+ L+ C+++ N ELA A + + L+ + Y+ +
Sbjct: 654 AGHLTEAKDLIDEMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLM 713
Query: 602 ANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
A +YA G + +IRK MR + G SW+ V +++H+F DVSHP+ AI
Sbjct: 714 AKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVNNKVHVFKADDVSHPQVIAI 769
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 140/529 (26%), Positives = 258/529 (48%), Gaps = 51/529 (9%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLF-DEMPERNVFSWNTIISACIKSHD 71
H + + GL N L+H Y L ++R+L ++ NV + N +++ +K
Sbjct: 27 HGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTDIAHPNVITHNVMLNGYVKLGR 86
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
L A LF P +D+ ++N+++ GY ++ Y A +L+ F+ M + + + FT
Sbjct: 87 LSDAVELFGRMPARDVASWNTLMSGYFQSQQYLA-SLESFVSMHRSGDS-SPNAFTFAYA 144
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
+ C L QL + K + ++L+DM+ +C + A R+F +E
Sbjct: 145 MKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVR-IKEPT 203
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
+ +N+M+ + ++ AL+ F PE D VSWN ++S Q+G E L + V M
Sbjct: 204 IFCRNSMLVGYVKTYGVDHALELFDSMPE-RDVVSWNMMVSALSQSGRVREALDMVVDMQ 262
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
GVR + T+ S+L+AC L +++ K++H+ V++N +P+V+S +V++Y KC
Sbjct: 263 SKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKC---- 318
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK--- 368
G +EA+ F+SL ++N V WT L +G+++
Sbjct: 319 ---------------------------GCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGC 351
Query: 369 -AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDK 427
++ E + +E +T D L L+ C + L G+++H+ L+ G Q+
Sbjct: 352 FTESVELFNQMRAELMT-----LDQFALATLISGCCSRMDLCLGRQLHSLCLKSG-QIQA 405
Query: 428 KLIS-TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
++S +L+ MY+KC N+ AE IF+ E+D+V + MI ++ G+ KA F+ M
Sbjct: 406 VVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMST 465
Query: 487 KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACM 535
K + +T+ A+L A+ G+ E G + +N M ++ + P+ Y +
Sbjct: 466 KNV----ITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTL 510
>gi|224118338|ref|XP_002317794.1| predicted protein [Populus trichocarpa]
gi|222858467|gb|EEE96014.1| predicted protein [Populus trichocarpa]
Length = 852
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 208/664 (31%), Positives = 358/664 (53%), Gaps = 23/664 (3%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKS--- 69
H IK L +N LI +Y K L +++K+ +MPER+ +WN++I+AC +
Sbjct: 183 HGLVIKFRFCLNIYVSNALIDMYGKCGSLDDAKKVLVKMPERDSVTWNSVITACAANGMV 242
Query: 70 ----HDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
L++ +SL S P ++V++++++ G+ GY+ +A+++ MQ E + +
Sbjct: 243 YEALEFLEKMKSLDYSMP--NVVSWSAVIGGFAQ-NGYDEEAIEMLFRMQV--EGLVPNA 297
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
T+ L C +L + G+QLH ++ + ++ V++L+D+Y +C A ++F
Sbjct: 298 QTLAGVLPACARLQRLDLGKQLHGYITRHDFISNPVVVNALVDVYRRCGDMGGAAKIFLK 357
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN---DAVSWNTLISGYVQNGDAEE 242
+ + N++S N M+ C G++ A + F L +SWN++ISGYV+N +E
Sbjct: 358 FSVK-NVLSCNTMIVGYCESGDVSKAKELFDCMDVLGIERGLISWNSIISGYVRNFMFDE 416
Query: 243 GLKLFVRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
+F M E G+ + T S L+AC +++ KEIH+ + GL S+ FV +V
Sbjct: 417 AFSMFQNMLMEEGIEPDSFTLGSVLTACADTISLRQGKEIHAQAIVKGLQSDTFVGGALV 476
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT----EKNVV 357
++Y KC+++ A+ ++ + +++I GY+ +E + + + N+
Sbjct: 477 EMYSKCQDLTAAQVAFDEVMEKDVPTWNALISGYTRSNQIERIQYLLEKMKGDGYHPNIY 536
Query: 358 VWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
W ++ +G V+ + + L SE + + D + I+L AC+ A L GK+ HA+
Sbjct: 537 TWNSILAGLVENRQLDLTMQLFSEMQISK-LRPDIYTVGIILPACSRLATLERGKQAHAH 595
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
++ G D + + LVDMY+KCG++ YA++ + +LV +N M+ A HGH E+
Sbjct: 596 SIKCGYDTDVHIGAALVDMYAKCGSLKYAQLAYDRISNPNLVSHNAMLTACAMHGHGEEG 655
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID 537
I LF+ ML G PD VTF+++LS+ H GSVE G ++F+ M Y + P HY M+D
Sbjct: 656 ISLFQTMLALGFIPDHVTFLSVLSSCVHVGSVETGCEFFDLM-GYYNVKPTLKHYTSMVD 714
Query: 538 LYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKAR 597
L R+ QL +A E +K +P E D+V+ G+ L C + N EL A E+L+ LE NN
Sbjct: 715 LLSRSGQLHEAYELIKKMPVECDSVLWGALLGGCVTHGNIELGEIAAERLIELEPNNSGN 774
Query: 598 YVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
YV LAN++A W ++ R+R M+ ++ GCSW+ ++EIH F D SH + I
Sbjct: 775 YVLLANLHAYARRWTDLARVRGMMKDRGMHKSPGCSWIEDKNEIHSFLACDRSHKRAEEI 834
Query: 658 YSVL 661
Y+ L
Sbjct: 835 YATL 838
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 155/544 (28%), Positives = 267/544 (49%), Gaps = 44/544 (8%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H IK G +L+ +Y++ LL+++ LF+ MP RN+ SW I+S
Sbjct: 82 HAHTIKTGFDADGFIDTKLLQMYARCGLLKDADFLFETMPMRNLHSWKAILSV------- 134
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
Y++ +E +A LF +Q + + +D F
Sbjct: 135 ------------------------YLDHGLFE-EAFLLFQVLQF--DGVELDFFVFPLVF 167
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C L +V GRQLH ++K + + ++LIDMY KC ++A +V E +
Sbjct: 168 KACSGLGSVELGRQLHGLVIKFRFCLNIYVSNALIDMYGKCGSLDDAKKVLVKMPER-DS 226
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELN----DAVSWNTLISGYVQNGDAEEGLKLFV 248
++ N+++ AC G + AL+ + L+ + VSW+ +I G+ QNG EE +++
Sbjct: 227 VTWNSVITACAANGMVYEALEFLEKMKSLDYSMPNVVSWSAVIGGFAQNGYDEEAIEMLF 286
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
RM G+ N T A L AC L+ + K++H ++ ++ ISNP V + +VDVY +C
Sbjct: 287 RMQVEGLVPNAQTLAGVLPACARLQRLDLGKQLHGYITRHDFISNPVVVNALVDVYRRCG 346
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL----TEKNVVVWTALFS 364
+M A + L V+N S ++MIVGY G++ +A+ FD + E+ ++ W ++ S
Sbjct: 347 DMGGAAKIFLKFSVKNVLSCNTMIVGYCESGDVSKAKELFDCMDVLGIERGLISWNSIIS 406
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
GYV+ + F + + +EG+ D+ L +L ACA +L GKEIHA + G+Q
Sbjct: 407 GYVRNFMFDEAFSMFQNMLMEEGIEPDSFTLGSVLTACADTISLRQGKEIHAQAIVKGLQ 466
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
D + LV+MYSKC ++T A++ F +E+D+ +N +I+ Y E+ L E+M
Sbjct: 467 SDTFVGGALVEMYSKCQDLTAAQVAFDEVMEKDVPTWNALISGYTRSNQIERIQYLLEKM 526
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
G P+ T+ +IL+ +++ + F+ M K+ P+ ++ R
Sbjct: 527 KGDGYHPNIYTWNSILAGLVENRQLDLTMQLFSEMQIS-KLRPDIYTVGIILPACSRLAT 585
Query: 545 LEKA 548
LE+
Sbjct: 586 LERG 589
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 188/392 (47%), Gaps = 39/392 (9%)
Query: 143 FGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAAC 202
G+Q+HA +KT DA GF + L+ MY++C ++A +FE
Sbjct: 77 LGKQVHAHTIKTGFDADGFIDTKLLQMYARCGLLKDADFLFE------------------ 118
Query: 203 CREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTF 262
M ++ SW ++S Y+ +G EE LF + +GV + F
Sbjct: 119 ------TMPMRNLH---------SWKAILSVYLDHGLFEEAFLLFQVLQFDGVELDFFVF 163
Query: 263 ASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGV 322
AC GL +V+ +++H V+K N +VS+ ++D+Y KC +++ A+ +L+
Sbjct: 164 PLVFKACSGLGSVELGRQLHGLVIKFRFCLNIYVSNALIDMYGKCGSLDDAKKVLVKMPE 223
Query: 323 RNSFSISSMIVGYSLQGNMEEARRHFDSL-----TEKNVVVWTALFSGYVKAQNCEALFD 377
R+S + +S+I + G + EA + + + NVV W+A+ G+ + E +
Sbjct: 224 RDSVTWNSVITACAANGMVYEALEFLEKMKSLDYSMPNVVSWSAVIGGFAQNGYDEEAIE 283
Query: 378 LLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMY 437
+L + EG+V +A L +L ACA L GK++H YI R + +++ LVD+Y
Sbjct: 284 MLFR-MQVEGLVPNAQTLAGVLPACARLQRLDLGKQLHGYITRHDFISNPVVVNALVDVY 342
Query: 438 SKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFV 497
+CG+M A IF F ++++ N MI Y G KA LF+ M GI+ +++
Sbjct: 343 RRCGDMGGAAKIFLKFSVKNVLSCNTMIVGYCESGDVSKAKELFDCMDVLGIERGLISWN 402
Query: 498 AILSAFRHCGSVEMGEKYFNSMTADYKISPET 529
+I+S + + F +M + I P++
Sbjct: 403 SIISGYVRNFMFDEAFSMFQNMLMEEGIEPDS 434
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 134/262 (51%), Gaps = 13/262 (4%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTI 62
+++L++ H QAI GL T L+ +YSK L ++ FDE+ E++V +WN +
Sbjct: 447 TISLRQGKEIHAQAIVKGLQSDTFVGGALVEMYSKCQDLTAAQVAFDEVMEKDVPTWNAL 506
Query: 63 ISACIKSHDLKQARSLFDSSP----HKDLVTYNSMLCGYINAEGYEAD-ALKLFIEMQSA 117
IS +S+ +++ + L + H ++ T+NS+L G + E + D ++LF EMQ +
Sbjct: 507 ISGYTRSNQIERIQYLLEKMKGDGYHPNIYTWNSILAGLV--ENRQLDLTMQLFSEMQIS 564
Query: 118 DEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYE 177
+R D +TV L C +L + G+Q HA +K D ++L+DMY+KC +
Sbjct: 565 K--LRPDIYTVGIILPACSRLATLERGKQAHAHSIKCGYDTDVHIGAALVDMYAKCGSLK 622
Query: 178 EACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN---DAVSWNTLISGY 234
A ++ + NL+S NAM+ AC G E + F L D V++ +++S
Sbjct: 623 YAQLAYDRISNP-NLVSHNAMLTACAMHGHGEEGISLFQTMLALGFIPDHVTFLSVLSSC 681
Query: 235 VQNGDAEEGLKLFVRMGENGVR 256
V G E G + F MG V+
Sbjct: 682 VHVGSVETGCEFFDLMGYYNVK 703
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/334 (20%), Positives = 145/334 (43%), Gaps = 75/334 (22%)
Query: 258 NEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESML 317
N +AS L +C + K K++H+ +K G ++ F+ + ++ +Y +C
Sbjct: 61 NTSKYASVLDSC---KCPKLGKQVHAHTIKTGFDADGFIDTKLLQMYARC---------- 107
Query: 318 LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFD 377
G +++A F+++ +N+ W A+ S Y+ E F
Sbjct: 108 ---------------------GLLKDADFLFETMPMRNLHSWKAILSVYLDHGLFEEAF- 145
Query: 378 LLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMY 437
LL + + +GV D + ++ AC+ ++ G+++H +++ ++ + + L+DMY
Sbjct: 146 LLFQVLQFDGVELDFFVFPLVFKACSGLGSVELGRQLHGLVIKFRFCLNIYVSNALIDMY 205
Query: 438 SKCGNMTYAEIIFQNFIERDLVLYN-VMIAC----------------------------- 467
KCG++ A+ + ERD V +N V+ AC
Sbjct: 206 GKCGSLDDAKKVLVKMPERDSVTWNSVITACAANGMVYEALEFLEKMKSLDYSMPNVVSW 265
Query: 468 ------YAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTA 521
+A +G++E+AI + M +G+ P+A T +L A +++G++ +T
Sbjct: 266 SAVIGGFAQNGYDEEAIEMLFRMQVEGLVPNAQTLAGVLPACARLQRLDLGKQLHGYITR 325
Query: 522 -DYKISPETDHYACMIDLYGRANQLEKAIE-FMK 553
D+ +P ++D+Y R + A + F+K
Sbjct: 326 HDFISNPVV--VNALVDVYRRCGDMGGAAKIFLK 357
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 2/181 (1%)
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
GK++HA+ ++ G D + + L+ MY++CG + A+ +F+ R+L + +++ Y
Sbjct: 78 GKQVHAHTIKTGFDADGFIDTKLLQMYARCGLLKDADFLFETMPMRNLHSWKAILSVYLD 137
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD 530
HG E+A LLF+ + G++ D F + A GSVE+G + + + ++
Sbjct: 138 HGLFEEAFLLFQVLQFDGVELDFFVFPLVFKACSGLGSVELGRQ-LHGLVIKFRFCLNIY 196
Query: 531 HYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRL 590
+ID+YG+ L+ A + + +P E D+V S + C N A E EK+ L
Sbjct: 197 VSNALIDMYGKCGSLDDAKKVLVKMP-ERDSVTWNSVITACAANGMVYEALEFLEKMKSL 255
Query: 591 E 591
+
Sbjct: 256 D 256
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 355 bits (912), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 213/699 (30%), Positives = 351/699 (50%), Gaps = 78/699 (11%)
Query: 17 IKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQA- 75
+ G + ++ ++ K + +R+ F+E+ ++VF WN ++S + K+A
Sbjct: 217 LSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKAL 276
Query: 76 RSLFD---SSPHKDLVTYNSMLCGYINA-------------------------------- 100
+ + D S D VT+N+++ GY +
Sbjct: 277 KCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAG 336
Query: 101 ---EGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSN- 156
GY+ +AL +F +M E ++ + T+ S ++ C L + GR++H + +K
Sbjct: 337 SEQNGYDFEALSVFRKM--VLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEEL 394
Query: 157 DASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFW 216
D+ +SL+D Y+KCR E A R F G ++ +L+S NAM+A G E A++
Sbjct: 395 DSDLLVGNSLVDYYAKCRSVEVARRKF-GMIKQTDLVSWNAMLAGYALRGSHEEAIELLS 453
Query: 217 R---QPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLR 273
Q D ++WN L++G+ Q GD + L+ F RM G+ N T + AL+AC +R
Sbjct: 454 EMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVR 513
Query: 274 NVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIV 333
N+K KEIH +VL+N + + V S ++ +Y C+++ A S+
Sbjct: 514 NLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSV----------------- 556
Query: 334 GYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDAL 393
F L+ ++VVVW ++ S ++ DLL E + V + +
Sbjct: 557 --------------FSELSTRDVVVWNSIISACAQSGRSVNALDLLRE-MNLSNVEVNTV 601
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF 453
+V L AC+ AAL GKEIH +I+R G+ ++++L+DMY +CG++ + IF
Sbjct: 602 TMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLM 661
Query: 454 IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
+RDLV +NVMI+ Y HG A+ LF++ G+KP+ +TF +LSA H G +E G
Sbjct: 662 PQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGW 721
Query: 514 KYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRL 573
KYF M +Y + P + YACM+DL RA Q + +EF++ +P E +A + GS L CR+
Sbjct: 722 KYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRI 781
Query: 574 NRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCS 633
+ N +LA A L LE + YV +AN+Y+A G W + +IR M+ + GCS
Sbjct: 782 HCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCS 841
Query: 634 WVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
W+ V+ ++H F VGD SHP I + + ++ EI
Sbjct: 842 WIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIG 880
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 153/600 (25%), Positives = 267/600 (44%), Gaps = 83/600 (13%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
NL+ H Q + G+ + ++L+ +Y + + ++R++FD+M ERNVFSW I+
Sbjct: 104 NLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIM- 162
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
M CG + E + +KLF M +E +R D
Sbjct: 163 ---------------------------EMYCGLGDYE----ETIKLFYLM--VNEGVRPD 189
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
F C +L N G+ ++ +M+ + + S++DM+ KC + A R FE
Sbjct: 190 HFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFE 249
Query: 185 ---------------------------GCTEEVNL-------ISKNAMVAACCREGEMEM 210
C ++ L ++ NA+++ + G+ E
Sbjct: 250 EIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEE 309
Query: 211 ALKTFWRQPELND----AVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASAL 266
A K F L D VSW LI+G QNG E L +F +M GV+ N T ASA+
Sbjct: 310 ASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAV 369
Query: 267 SACCGLRNVKCAKEIHSWVLK-NGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNS 325
SAC L ++ +EIH + +K L S+ V + +VD Y KC ++ A + +
Sbjct: 370 SACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDL 429
Query: 326 FSISSMIVGYSLQGNMEEARRHFDSLT----EKNVVVWTALFSGYVKAQNCEALFDLLSE 381
S ++M+ GY+L+G+ EEA + E +++ W L +G+ + + +A +
Sbjct: 430 VSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQR 489
Query: 382 FVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
+ G+ + + L AC L GKEIH Y+LR +++ + S L+ MYS C
Sbjct: 490 MHSM-GMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCD 548
Query: 442 NMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
++ A +F RD+V++N +I+ A G A+ L EM ++ + VT V+ L
Sbjct: 549 SLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALP 608
Query: 502 AFRHCGSVEMGEKYFNSMTADYKISPETDHYA--CMIDLYGRANQLEKAIEFMKSIPTEE 559
A ++ G++ + + +T ++ +ID+YGR ++K+ +P +
Sbjct: 609 ACSKLAALRQGKEIHQFII---RCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRD 665
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/452 (27%), Positives = 205/452 (45%), Gaps = 85/452 (18%)
Query: 112 IEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYS 171
+++ + DE I + S L C KL N+ G Q+HA +V D F S L+++Y
Sbjct: 80 MDLTNPDECIEI----YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYC 135
Query: 172 KCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLI 231
+ C E+A R+F+ +E + SW ++
Sbjct: 136 QTGCVEDARRMFDKMSER---------------------------------NVFSWTAIM 162
Query: 232 SGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI 291
Y GD EE +KLF M GVR + F AC L+N + K+++ ++L G
Sbjct: 163 EMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFE 222
Query: 292 SNPFVSSGIVDVYCKCENMNYAE----------------------------------SML 317
N V I+D++ KC M+ A S +
Sbjct: 223 GNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDM 282
Query: 318 LLKGVR-NSFSISSMIVGYSLQGNMEEARRHFDSLT-----EKNVVVWTALFSGYVKAQN 371
L GV+ + + +++I GY+ G EEA ++F + + NVV WTAL +G QN
Sbjct: 283 KLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAG--SEQN 340
Query: 372 CEALFDLLSEF--VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
F+ LS F + EGV +++ + + AC + L G+EIH Y +++ ++D L
Sbjct: 341 GYD-FEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVE-ELDSDL 398
Query: 430 I--STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
+ ++LVD Y+KC ++ A F + DLV +N M+A YA G E+AI L EM +
Sbjct: 399 LVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQ 458
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSM 519
GI+PD +T+ +++ F G + ++F M
Sbjct: 459 GIEPDIITWNGLVTGFTQYGDGKAALEFFQRM 490
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 128/275 (46%), Gaps = 32/275 (11%)
Query: 262 FASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKG 321
+AS L C L N++ ++H+ ++ NG+ F+ S +++VYC+
Sbjct: 92 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQ--------------- 136
Query: 322 VRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSE 381
G +E+ARR FD ++E+NV WTA+ Y + E L
Sbjct: 137 ----------------TGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYL 180
Query: 382 FVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
V EGV D + + AC+ GK+++ Y+L +G + + + +++DM+ KCG
Sbjct: 181 MVN-EGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCG 239
Query: 442 NMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
M A F+ +D+ ++N+M++ Y G +KA+ +M G+KPD VT+ AI+S
Sbjct: 240 RMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIIS 299
Query: 502 AFRHCGSVEMGEKYFNSMTADYKISPETDHYACMI 536
+ G E KYF M P + +I
Sbjct: 300 GYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALI 334
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 114/253 (45%), Gaps = 23/253 (9%)
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF 453
I +L C L G ++HA ++ GV + + L S L+++Y + G + A +F
Sbjct: 91 IYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKM 150
Query: 454 IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
ER++ + ++ Y G E+ I LF M+ +G++PD F + A + +G+
Sbjct: 151 SERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGK 210
Query: 514 KYFNSMTADYKISPETDHYAC----MIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLN 569
+ DY +S + +C ++D++ + +++ A F + I E V + + +
Sbjct: 211 DVY-----DYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEI--EFKDVFMWNIMV 263
Query: 570 VCRLNRNAELAGEAEEKL-----LRLEG--NNKARYVQLANVYAAEGNWAEMGRIRKQMR 622
++ GE ++ L ++L G ++ + + + YA G + E + +M
Sbjct: 264 SGYTSK-----GEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMG 318
Query: 623 GMKGNRFAGCSWV 635
G+K + SW
Sbjct: 319 GLKDFKPNVVSWT 331
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 126/317 (39%), Gaps = 61/317 (19%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L++ H I+ GL N LI +Y + +++SR++FD MP+R++ SWN +IS
Sbjct: 616 LRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISV 675
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
G+ DA+ LF + ++ ++ +
Sbjct: 676 --------------------------------YGMHGFGMDAVNLFQQFRTMG--LKPNH 701
Query: 126 FTVTSTLNLCVK--LLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
T T+ L+ C L+ G+ + + + D + + ++D+ S+ + E
Sbjct: 702 ITFTNLLSACSHSGLIEEGW-KYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFI 760
Query: 184 EGCTEEVNLISKNAMVAAC---CREGEMEMALKTFWRQPELNDAVSWNTLISG--YVQNG 238
E E N +++ AC C E A + + EL S N ++ Y G
Sbjct: 761 EKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLF---ELEPQSSGNYVLMANIYSAAG 817
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF--- 295
E+ K+ M E GV + G ++ +++HS+V+ G S+P
Sbjct: 818 RWEDAAKIRCLMKERGV-----------TKPPGCSWIEVKRKLHSFVV--GDTSHPLMEQ 864
Query: 296 VSSGIVDVYCKCENMNY 312
+S+ + +Y + + Y
Sbjct: 865 ISAKMESLYFDIKEIGY 881
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 210/679 (30%), Positives = 343/679 (50%), Gaps = 78/679 (11%)
Query: 17 IKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQA- 75
+ G + ++ ++ K + +R+ F+E+ ++VF WN ++S + K+A
Sbjct: 217 LSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKAL 276
Query: 76 RSLFD---SSPHKDLVTYNSMLCGYINA-------------------------------- 100
+ + D S D VT+N+++ GY +
Sbjct: 277 KCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAG 336
Query: 101 ---EGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSN- 156
GY+ +AL +F +M E ++ + T+ S ++ C L + GR++H + +K
Sbjct: 337 SEQNGYDFEALSVFRKM--VLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEEL 394
Query: 157 DASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFW 216
D+ +SL+D Y+KCR E A R F G ++ +L+S NAM+A G E A++
Sbjct: 395 DSDLLVGNSLVDYYAKCRSVEVARRKF-GMIKQTDLVSWNAMLAGYALRGSHEEAIELLS 453
Query: 217 R---QPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLR 273
Q D ++WN L++G+ Q GD + L+ F RM G+ N T + AL+AC +R
Sbjct: 454 EMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVR 513
Query: 274 NVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIV 333
N+K KEIH +VL+N + + V S ++ +Y C+++ A S+
Sbjct: 514 NLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSV----------------- 556
Query: 334 GYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDAL 393
F L+ ++VVVW ++ S ++ DLL E + V + +
Sbjct: 557 --------------FSELSTRDVVVWNSIISACAQSGRSVNALDLLRE-MNLSNVEVNTV 601
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF 453
+V L AC+ AAL GKEIH +I+R G+ ++++L+DMY +CG++ + IF
Sbjct: 602 TMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLM 661
Query: 454 IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
+RDLV +NVMI+ Y HG A+ LF+ G+KP+ +TF +LSA H G +E G
Sbjct: 662 PQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEGW 721
Query: 514 KYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRL 573
KYF M +Y + P + YACM+DL RA Q + +EF++ +P E +A + GS L CR+
Sbjct: 722 KYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRI 781
Query: 574 NRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCS 633
+ N +LA A L LE + YV +AN+Y+A G W + +IR M+ + GCS
Sbjct: 782 HCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCS 841
Query: 634 WVYVEHEIHIFTVGDVSHP 652
W+ V+ ++H F VGD SHP
Sbjct: 842 WIEVKRKLHSFVVGDTSHP 860
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 153/600 (25%), Positives = 267/600 (44%), Gaps = 83/600 (13%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
NL+ H Q + G+ + ++L+ +Y + + ++R++FD+M ERNVFSW I+
Sbjct: 104 NLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIM- 162
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
M CG + E + +KLF M +E +R D
Sbjct: 163 ---------------------------EMYCGLGDYE----ETIKLFYLM--VNEGVRPD 189
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
F C +L N G+ ++ +M+ + + S++DM+ KC + A R FE
Sbjct: 190 HFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFE 249
Query: 185 ---------------------------GCTEEVNL-------ISKNAMVAACCREGEMEM 210
C ++ L ++ NA+++ + G+ E
Sbjct: 250 EIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEE 309
Query: 211 ALKTFWRQPELND----AVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASAL 266
A K F L D VSW LI+G QNG E L +F +M GV+ N T ASA+
Sbjct: 310 ASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAV 369
Query: 267 SACCGLRNVKCAKEIHSWVLK-NGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNS 325
SAC L ++ +EIH + +K L S+ V + +VD Y KC ++ A + +
Sbjct: 370 SACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDL 429
Query: 326 FSISSMIVGYSLQGNMEEARRHFDSLT----EKNVVVWTALFSGYVKAQNCEALFDLLSE 381
S ++M+ GY+L+G+ EEA + E +++ W L +G+ + + +A +
Sbjct: 430 VSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQR 489
Query: 382 FVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
+ G+ + + L AC L GKEIH Y+LR +++ + S L+ MYS C
Sbjct: 490 MHSM-GMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCD 548
Query: 442 NMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
++ A +F RD+V++N +I+ A G A+ L EM ++ + VT V+ L
Sbjct: 549 SLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALP 608
Query: 502 AFRHCGSVEMGEKYFNSMTADYKISPETDHYA--CMIDLYGRANQLEKAIEFMKSIPTEE 559
A ++ G++ + + +T ++ +ID+YGR ++K+ +P +
Sbjct: 609 ACSKLAALRQGKEIHQFII---RCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRD 665
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/452 (27%), Positives = 205/452 (45%), Gaps = 85/452 (18%)
Query: 112 IEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYS 171
+++ + DE I + S L C KL N+ G Q+HA +V D F S L+++Y
Sbjct: 80 MDLTNPDECIEI----YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYC 135
Query: 172 KCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLI 231
+ C E+A R+F+ +E + SW ++
Sbjct: 136 QTGCVEDARRMFDKMSER---------------------------------NVFSWTAIM 162
Query: 232 SGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI 291
Y GD EE +KLF M GVR + F AC L+N + K+++ ++L G
Sbjct: 163 EMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFE 222
Query: 292 SNPFVSSGIVDVYCKCENMNYAE----------------------------------SML 317
N V I+D++ KC M+ A S +
Sbjct: 223 GNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDM 282
Query: 318 LLKGVR-NSFSISSMIVGYSLQGNMEEARRHFDSLT-----EKNVVVWTALFSGYVKAQN 371
L GV+ + + +++I GY+ G EEA ++F + + NVV WTAL +G QN
Sbjct: 283 KLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAG--SEQN 340
Query: 372 CEALFDLLSEF--VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
F+ LS F + EGV +++ + + AC + L G+EIH Y +++ ++D L
Sbjct: 341 GYD-FEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVE-ELDSDL 398
Query: 430 I--STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
+ ++LVD Y+KC ++ A F + DLV +N M+A YA G E+AI L EM +
Sbjct: 399 LVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQ 458
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSM 519
GI+PD +T+ +++ F G + ++F M
Sbjct: 459 GIEPDIITWNGLVTGFTQYGDGKAALEFFQRM 490
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 128/275 (46%), Gaps = 32/275 (11%)
Query: 262 FASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKG 321
+AS L C L N++ ++H+ ++ NG+ F+ S +++VYC+
Sbjct: 92 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQ--------------- 136
Query: 322 VRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSE 381
G +E+ARR FD ++E+NV WTA+ Y + E L
Sbjct: 137 ----------------TGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFY- 179
Query: 382 FVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
+ EGV D + + AC+ GK+++ Y+L +G + + + +++DM+ KCG
Sbjct: 180 LMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCG 239
Query: 442 NMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
M A F+ +D+ ++N+M++ Y G +KA+ +M G+KPD VT+ AI+S
Sbjct: 240 RMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIIS 299
Query: 502 AFRHCGSVEMGEKYFNSMTADYKISPETDHYACMI 536
+ G E KYF M P + +I
Sbjct: 300 GYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALI 334
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 114/253 (45%), Gaps = 23/253 (9%)
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF 453
I +L C L G ++HA ++ GV + + L S L+++Y + G + A +F
Sbjct: 91 IYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKM 150
Query: 454 IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
ER++ + ++ Y G E+ I LF M+ +G++PD F + A + +G+
Sbjct: 151 SERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGK 210
Query: 514 KYFNSMTADYKISPETDHYAC----MIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLN 569
+ DY +S + +C ++D++ + +++ A F + I E V + + +
Sbjct: 211 DVY-----DYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEI--EFKDVFMWNIMV 263
Query: 570 VCRLNRNAELAGEAEEKL-----LRLEG--NNKARYVQLANVYAAEGNWAEMGRIRKQMR 622
++ GE ++ L ++L G ++ + + + YA G + E + +M
Sbjct: 264 SGYTSK-----GEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMG 318
Query: 623 GMKGNRFAGCSWV 635
G+K + SW
Sbjct: 319 GLKDFKPNVVSWT 331
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 117/298 (39%), Gaps = 58/298 (19%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L++ H I+ GL N LI +Y + +++SR++FD MP+R++ SWN +IS
Sbjct: 616 LRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISV 675
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
G+ DA+ LF ++ ++ +
Sbjct: 676 --------------------------------YGMHGFGMDAVNLFQXFRTMG--LKPNH 701
Query: 126 FTVTSTLNLCVK--LLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
T T+ L+ C L+ G+ + + + D + + ++D+ S+ + E
Sbjct: 702 ITFTNLLSACSHSGLIEEGW-KYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFI 760
Query: 184 EGCTEEVNLISKNAMVAAC---CREGEMEMALKTFWRQPELNDAVSWNTLISG--YVQNG 238
E E N +++ AC C E A + + EL S N ++ Y G
Sbjct: 761 EKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLF---ELEPQSSGNYVLMANIYSAAG 817
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFV 296
E+ K+ M E GV + G ++ +++HS+V+ G S+P +
Sbjct: 818 RWEDAAKIRCLMKERGV-----------TKPPGCSWIEVKRKLHSFVV--GDTSHPLM 862
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 197/601 (32%), Positives = 312/601 (51%), Gaps = 68/601 (11%)
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFT 127
K + AR +F++ P+ ++N+++ GY + +AL++F +Q + ++ DE +
Sbjct: 318 KCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQV-LEALEIFRSLQKS--YLDFDEIS 374
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
++ L C + G QLH VK D + ++++DMY+KC EAC +F+
Sbjct: 375 LSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDM- 433
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
E+ DAVSWN +I+ + QN EE L LF
Sbjct: 434 --------------------------------EIKDAVSWNAIIAAHEQNEHVEETLALF 461
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
V M + + +++TF S + AC G + + E+H V+K+G+ + FV S I+D+YCKC
Sbjct: 462 VSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKC 521
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
G + EA + + L E+ V W ++ SG+
Sbjct: 522 -------------------------------GMLVEAEKIHERLEERTTVSWNSIISGFS 550
Query: 368 KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDK 427
+ E S + + GV+ D +L CA A + GK+IH IL++ + D
Sbjct: 551 SEKQGENALSYFSRML-QVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDV 609
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
+ ST+VDMYSKCGNM + I+F+ +RD V ++ MI YA+HG E AI LFEEM +
Sbjct: 610 YIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQ 669
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEK 547
+KP+ F+++L A H G V+ G YF M + Y + P+ +HY+CM+DL GR+ Q+ +
Sbjct: 670 NVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNE 729
Query: 548 AIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAA 607
A+E ++S+P E D VI + L +CRL N E+A +A LL+L+ + + YV L+NVYA
Sbjct: 730 ALELIESMPFEADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQDSSAYVLLSNVYAI 789
Query: 608 EGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGE 667
G W E+ +IR M+ K + GCSW+ V E+H F VGD +HP++ IY + E
Sbjct: 790 AGMWGEVAKIRSFMKNYKLKKEPGCSWIQVRDEVHAFLVGDKAHPRSEEIYQQTHLLVDE 849
Query: 668 L 668
+
Sbjct: 850 M 850
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 153/621 (24%), Positives = 271/621 (43%), Gaps = 116/621 (18%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H Q G T +N L+ Y K L + +FD+MP+R+V SWNT+I ++
Sbjct: 61 HAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNM 120
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+ A+ LFDS P +D+V++NSML Y+ G+ ++++F +M+ + I+ D T L
Sbjct: 121 EFAQFLFDSMPERDVVSWNSMLSCYLQ-NGFHRKSIEIFTKMRLLE--IQHDYATFAVVL 177
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C + + G G Q+H ++ D+ ++L+DMYS C+
Sbjct: 178 KACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCK------------------ 219
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+++ A F PE N +V W+ +I+GYV+N EGLKL+ M +
Sbjct: 220 --------------KLDHAFNIFCEMPERN-SVCWSAVIAGYVRNDRFTEGLKLYKVMLD 264
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G+ ++ TFASA +C GL + ++H++ LK + V + +D+Y KC+ M
Sbjct: 265 EGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVD 324
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK------------------ 354
A + S +++IVGY+ Q + EA F SL +
Sbjct: 325 ARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSA 384
Query: 355 ---------------------NVVVWTALFSGYVKAQNCEALFD---LLSEFVTKEGVVT 390
N+ V + Y K C AL + + + K+ V
Sbjct: 385 IKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAK---CGALMEACLIFDDMEIKDAVSW 441
Query: 391 DALIL----------VILLGACALQAALHP--------------------GKEIHAYILR 420
+A+I + L L++ + P G E+H +++
Sbjct: 442 NAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIK 501
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
G+ +D + S ++DMY KCG + AE I + ER V +N +I+ ++ E A+
Sbjct: 502 SGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSY 561
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY--ACMIDL 538
F ML+ G+ PD T+ +L + +VE+G++ + K+ +D Y + ++D+
Sbjct: 562 FSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQIL---KLQLHSDVYIASTIVDM 618
Query: 539 YGRANQLEKAIEFMKSIPTEE 559
Y + ++ + + P +
Sbjct: 619 YSKCGNMQDSRIMFEKAPKRD 639
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 167/379 (44%), Gaps = 36/379 (9%)
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
+ T + C L + G+Q HA + T + F + L+ Y KC A VF+
Sbjct: 38 KLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFD 97
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
+ ++IS N M+ G ME A F PE D VSWN+++S Y+QNG + +
Sbjct: 98 KMPQR-DVISWNTMIFGYAGVGNMEFAQFLFDSMPE-RDVVSWNSMLSCYLQNGFHRKSI 155
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
++F +M ++ + TFA L AC G+ + ++H ++ G S+ + +VD+Y
Sbjct: 156 EIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMY 215
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
C+ +++A F+I F + E+N V W+A+ +
Sbjct: 216 STCKKLDHA------------FNI-------------------FCEMPERNSVCWSAVIA 244
Query: 365 GYVKAQN-CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
GYV+ E L L + + EG+ +CA +A G ++HAY L+
Sbjct: 245 GYVRNDRFTEGL--KLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNF 302
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
D + + +DMY+KC M A +F F +N +I YA +A+ +F
Sbjct: 303 GYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRS 362
Query: 484 MLEKGIKPDAVTFVAILSA 502
+ + + D ++ L+A
Sbjct: 363 LQKSYLDFDEISLSGALTA 381
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 155/328 (47%), Gaps = 20/328 (6%)
Query: 261 TFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLK 320
TF+ C L+ + K+ H+ + G + FVS+ ++ YCKC N+NYA ++
Sbjct: 40 TFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKM 99
Query: 321 GVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLS 380
R+ S ++MI GY+ GNME A+ FDS+ E++VV W ++ S Y++ ++ +
Sbjct: 100 PQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFT 159
Query: 381 EFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC 440
+ E + D ++L AC G ++H ++MG D + LVDMYS C
Sbjct: 160 KMRLLE-IQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTC 218
Query: 441 GNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAIL 500
+ +A IF ER+ V ++ +IA Y + + + L++ ML++G+ TF
Sbjct: 219 KKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFA--- 275
Query: 501 SAFRHCGSV---EMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPT 557
SAFR C + E+G + ++ + +D+Y + +++ A + + P
Sbjct: 276 SAFRSCAGLSAFELGTQ-LHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFP- 333
Query: 558 EEDAVILGSFLNVCRLNRNAELAGEAEE 585
N R + NA + G A +
Sbjct: 334 -----------NPTRQSHNALIVGYARQ 350
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 155/362 (42%), Gaps = 67/362 (18%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACI 67
E + H A+K GL N ++ +Y+K L E+ +FD+M ++ SWN II+A
Sbjct: 390 EGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHE 449
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFT 127
++ +++ L LF+ M + + D++T
Sbjct: 450 QNEHVEE--------------------------------TLALFVSMLRST--MEPDDYT 475
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
S + C + +G ++H ++K+ F S++IDMY KC EA ++ E
Sbjct: 476 FGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHER-L 534
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
EE +S N+ +ISG+ E L F
Sbjct: 535 EERTTVSWNS--------------------------------IISGFSSEKQGENALSYF 562
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
RM + GV + T+A+ L C L V+ K+IH +LK L S+ +++S IVD+Y KC
Sbjct: 563 SRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKC 622
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
NM + M R+ + S+MI Y+ G E+A + F+ + +NV +F +
Sbjct: 623 GNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVL 682
Query: 368 KA 369
+A
Sbjct: 683 RA 684
>gi|255567371|ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536026|gb|EEF37684.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 2000
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 204/629 (32%), Positives = 350/629 (55%), Gaps = 7/629 (1%)
Query: 41 LRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINA 100
L E+RKLFDEMP+ N SW +IS +K ++++ F+ +P +++V++ + + GY+
Sbjct: 103 LDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFERNPFQNVVSWTAAISGYVQ- 161
Query: 101 EGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASG 160
G+ +A+KLFI++ ++ ++ ++ T TS + C L + G G + +VKT +
Sbjct: 162 NGFSVEAMKLFIKLLESE--VKPNKVTFTSVVRACANLGDFGLGMSVLGLIVKTGYEHDL 219
Query: 161 FAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPE 220
+SLI + + A VF+ EE +++S A++ E+ A + F P+
Sbjct: 220 AVSNSLITLCLRMGEIHLAREVFDR-MEEKDVVSWTAILDLYVEMDELGEARRIFDEMPQ 278
Query: 221 LNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKE 280
N+ VSW+ +I+ Y Q+G EE L+LF RM + G + N F+S LSA + ++
Sbjct: 279 RNE-VSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSILSALASVEALQAGMN 337
Query: 281 IHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGN 340
IH V K G + FVSS ++D+YCKC + +N S ++M+ GYSL G+
Sbjct: 338 IHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNMVSWNAMVGGYSLNGH 397
Query: 341 MEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLG 400
MEEA+ F+ + +N V W+A+ +G++ + + +F++ +E + G + + LL
Sbjct: 398 MEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILL-GEIPNKSTFSSLLC 456
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL 460
ACA A+L GK +H I+++G+Q D + + L DMY+K G++ ++ +F +++ V
Sbjct: 457 ACASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKKVFNRMPKKNEVS 516
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLE-KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSM 519
+ MI A G E+++ LFEEM + I P+ V F+A+L A H G V+ G YFNSM
Sbjct: 517 WTAMIQGLAESGLAEESLTLFEEMEKTSSIAPNEVMFLAVLFACSHSGLVDKGLWYFNSM 576
Query: 520 TADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAEL 579
A Y + P+ H+ C++D+ RA +L +A EF+ S+P + + + L+ C+ +N EL
Sbjct: 577 EAVYGLKPKGRHFTCVVDMLSRAGRLFEAEEFIYSMPFQPETNAWAALLSGCKTYKNEEL 636
Query: 580 AGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEH 639
A KL + N A YV L+N+YA+ G W ++ ++RK M+ + GCSWV +
Sbjct: 637 AERVAGKLWEMAEKNCAGYVLLSNIYASAGRWRDVLKVRKLMKAKGLKKSGGCSWVEIRD 696
Query: 640 EIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
+H F D +H ++ IY +L + E+
Sbjct: 697 RVHSFYSEDGAHSQSAEIYEILELLGYEM 725
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/432 (25%), Positives = 202/432 (46%), Gaps = 37/432 (8%)
Query: 17 IKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQAR 76
+K G +N LI + + + +R++FD M E++V SW I+ ++ +L +AR
Sbjct: 211 VKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVEMDELGEAR 270
Query: 77 SLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCV 136
+FD P ++ V++++M+ Y + GY ++L+LF M E + + +S L+
Sbjct: 271 RIFDEMPQRNEVSWSAMIARYCQS-GYPEESLRLFCRM--IQEGFKPNISCFSSILSALA 327
Query: 137 KLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKN 196
+ + G +H + K + F SSLIDMY KC ++ +F+ E+ N++S N
Sbjct: 328 SVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEK-NMVSWN 386
Query: 197 AMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVR 256
AMV G ME A F P N+ VSW+ +I+G++ +E ++F M G
Sbjct: 387 AMVGGYSLNGHMEEAKYLFNIMPVRNN-VSWSAIIAGHLDCEQFDEMFEVFNEMILLGEI 445
Query: 257 WNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESM 316
N+ TF+S L AC ++ K +H ++K G+ + +V + + D+Y K
Sbjct: 446 PNKSTFSSLLCACASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAK---------- 495
Query: 317 LLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALF 376
G++E +++ F+ + +KN V WTA+ G ++ E
Sbjct: 496 ---------------------SGDIESSKKVFNRMPKKNEVSWTAMIQGLAESGLAEESL 534
Query: 377 DLLSEFVTKEGVVTDALILVILLGACALQAALHPGK-EIHAYILRMGVQMDKKLISTLVD 435
L E + + ++ + +L AC+ + G ++ G++ + + +VD
Sbjct: 535 TLFEEMEKTSSIAPNEVMFLAVLFACSHSGLVDKGLWYFNSMEAVYGLKPKGRHFTCVVD 594
Query: 436 MYSKCGNMTYAE 447
M S+ G + AE
Sbjct: 595 MLSRAGRLFEAE 606
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 125/265 (47%), Gaps = 37/265 (13%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L+ + H K G ++ LI +Y K ++ R LFD + E+N+ SWN ++
Sbjct: 332 LQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNMVSWNAMVGG 391
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
+ +++A+ LF+ P ++ V++++++ G+++ E ++ + ++F EM E ++
Sbjct: 392 YSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFD-EMFEVFNEMILLGE--IPNK 448
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
T +S L C ++ G+ LH +VK + ++L DMY+K
Sbjct: 449 STFSSLLCACASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKS------------ 496
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
G++E + K F R P+ N+ VSW +I G ++G AEE L
Sbjct: 497 --------------------GDIESSKKVFNRMPKKNE-VSWTAMIQGLAESGLAEESLT 535
Query: 246 LFVRMGE-NGVRWNEHTFASALSAC 269
LF M + + + NE F + L AC
Sbjct: 536 LFEEMEKTSSIAPNEVMFLAVLFAC 560
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 4/127 (3%)
Query: 390 TDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEII 449
T A V LL Q + G +HA++ + G+ ++ + L+ MY A+ I
Sbjct: 19 TYAQTCVSLLKNLTNQGLIRDGSALHAHLFKTGISSEQYISIKLLIMYLNYRKSAEADQI 78
Query: 450 FQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSV 509
++F DLV++N MI+ G+ ++A LF+EM + + +++ A++S F G V
Sbjct: 79 SKDFDGFDLVVHNCMISANVQRGNLDEARKLFDEMPQT----NEISWTALISGFMKYGRV 134
Query: 510 EMGEKYF 516
YF
Sbjct: 135 RESMWYF 141
>gi|225457861|ref|XP_002279169.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial-like [Vitis vinifera]
Length = 685
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 213/656 (32%), Positives = 352/656 (53%), Gaps = 39/656 (5%)
Query: 13 HVQAIKAGLTLTTITT-NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHD 71
H+ +K+G+ + ++ N+L+ +YS+ N +RE+++LF+EMP+RN FSWNT+I +KS
Sbjct: 29 HILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQLFEEMPKRNCFSWNTMIEGYLKSGS 88
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSAD------------- 118
++ LFDS PHKD ++N ++ G+ EG A +LF EM +
Sbjct: 89 KGKSLELFDSMPHKDAFSWNVVISGFAK-EGNLEVARRLFNEMPWKNGIAWNSMIHGYAC 147
Query: 119 -------------------EHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDAS 159
E D F + + + C L + G+Q+HA +V +
Sbjct: 148 NGRPKEAVGLFKDLSLNPLERFCGDTFVLATVVGACTNLGALDCGKQIHARIVVDEVEFD 207
Query: 160 GFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQP 219
SSL+++Y KC + A V +E + S +A+++ G M A + F +
Sbjct: 208 SVLGSSLVNLYGKCGDIDSANHVLN-LMKEPDAFSLSALISGYASCGRMNDARRIFCLKS 266
Query: 220 ELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAK 279
V WN++ISGYV N +A E L+LF M GV+ + TFAS LSAC L +
Sbjct: 267 NAC-VVLWNSMISGYVANNEALEALELFNNMRRKGVQEDYSTFASVLSACSTLGIIDQGI 325
Query: 280 EIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQG 339
++H+ V K G ++ + S +VD+Y KC + A + ++ ++SMI YS G
Sbjct: 326 QVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQAYDTILLNSMITVYSNCG 385
Query: 340 NMEEARRHFDSLTEKNVVVWTALFSGYVK-AQNCEALFDLLSEFVTKEGVVTDALILVIL 398
+++AR+ FD++ K+++ W ++ G+ + A EAL DL E + K G+ D L +
Sbjct: 386 RIDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEAL-DLFCE-MNKLGLRMDKFSLAGV 443
Query: 399 LGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDL 458
+ ACA ++L G++I A +G++ D+ + ++LVD Y KCG + + +F ++ D
Sbjct: 444 ISACASISSLELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRMMKSDE 503
Query: 459 VLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNS 518
V +N M+ YA +GH +A+ +F++M G++P +TFV +LSA HCG VE G K+F +
Sbjct: 504 VPWNSMLMGYATNGHGIEALNVFDQMRSVGVQPTDITFVGVLSACDHCGLVEEGRKWFYA 563
Query: 519 MTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAE 578
M DY I+P +HY+CM+DLY RA LE A+ ++ +P + D + S L C + N
Sbjct: 564 MKLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQMPLKADTSMWSSVLRGCVAHGNNI 623
Query: 579 LAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSW 634
L + ++++ L+ N YVQL+ +YA +W ++RK M K + GCSW
Sbjct: 624 LGKKVAKRIIDLDPENSGAYVQLSGIYATFEDWGRSAQVRKLMYDKKIPKVPGCSW 679
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 139/518 (26%), Positives = 236/518 (45%), Gaps = 80/518 (15%)
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS-LIDMYSKCRCYEEA 179
+ +D ++ L C ++ GR LH +K+ S ++ + L+ MYS+C EA
Sbjct: 2 VDLDLHSLARQLGSCNNYGSIYRGRLLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREA 61
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
++FE + N S N M+ + G +L+ F P DA SWN +ISG+ + G+
Sbjct: 62 QQLFEEMPKR-NCFSWNTMIEGYLKSGSKGKSLELFDSMPH-KDAFSWNVVISGFAKEGN 119
Query: 240 AEEGLKLFVRMG-ENGVRWNE-------------------------------HTF--ASA 265
E +LF M +NG+ WN TF A+
Sbjct: 120 LEVARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLATV 179
Query: 266 LSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNS 325
+ AC L + C K+IH+ ++ + + + + S +V++Y KC +++ A +L L ++
Sbjct: 180 VGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDA 239
Query: 326 FSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDL-LSEFVT 384
FS+S++I GY+ G M +ARR F + VV+W ++ SGYV N EAL L L +
Sbjct: 240 FSLSALISGYASCGRMNDARRIFCLKSNACVVLWNSMISGYVA--NNEALEALELFNNMR 297
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK----- 439
++GV D +L AC+ + G ++HA++ ++G D + S LVDMYSK
Sbjct: 298 RKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPD 357
Query: 440 --------------------------CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH 473
CG + A IF + L+ +N MI ++ +
Sbjct: 358 DACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNAC 417
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY- 532
+A+ LF EM + G++ D + ++SA S+E+GE+ F T I E D
Sbjct: 418 PIEALDLFCEMNKLGLRMDKFSLAGVISACASISSLELGEQIFARATI---IGLEFDQII 474
Query: 533 -ACMIDLYGRANQLEKAIEF----MKSIPTEEDAVILG 565
++D Y + +E + MKS +++++G
Sbjct: 475 STSLVDFYCKCGLVEHGRKLFDRMMKSDEVPWNSMLMG 512
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 160/378 (42%), Gaps = 71/378 (18%)
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF-VSSGIVDVYCKCENMNYAESMLL 318
H+ A L +C ++ + +H LK+G++ + + + ++ +Y +C +M A+ +
Sbjct: 7 HSLARQLGSCNNYGSIYRGRLLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQLFE 66
Query: 319 LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDL 378
RN FS ++MI GY G+ ++ FDS+ K+ W + SG+ K N E L
Sbjct: 67 EMPKRNCFSWNTMIEGYLKSGSKGKSLELFDSMPHKDAFSWNVVISGFAKEGNLEVARRL 126
Query: 379 LSEFVTKEGVV---------------------------------TDALILVILLGACALQ 405
+E K G+ D +L ++GAC
Sbjct: 127 FNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLATVVGACTNL 186
Query: 406 AALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD-------- 457
AL GK+IHA I+ V+ D L S+LV++Y KCG++ A + E D
Sbjct: 187 GALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLSALI 246
Query: 458 -----------------------LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAV 494
+VL+N MI+ Y + +A+ LF M KG++ D
Sbjct: 247 SGYASCGRMNDARRIFCLKSNACVVLWNSMISGYVANNEALEALELFNNMRRKGVQEDYS 306
Query: 495 TFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY--ACMIDLYGRANQLEKAIEFM 552
TF ++LSA G ++ G + + YK+ D + ++D+Y + + + A +
Sbjct: 307 TFASVLSACSTLGIIDQGIQVHAHV---YKVGFTNDIIIDSALVDMYSKCRRPDDACKLF 363
Query: 553 KSIPTEEDAVILGSFLNV 570
+ D ++L S + V
Sbjct: 364 SDLQA-YDTILLNSMITV 380
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 140/323 (43%), Gaps = 51/323 (15%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
+ + + H K G T I + L+ +YSK ++ KLF ++ + N++I+
Sbjct: 321 IDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQAYDTILLNSMITV 380
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
+ AR +FD+ P K L+++NSM+ G+ + +AL LF EM +RMD+
Sbjct: 381 YSNCGRIDDARQIFDTMPSKSLISWNSMIVGF-SQNACPIEALDLFCEMNKLG--LRMDK 437
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
F++ ++ C + ++ G Q+ A + +SL+D Y KC E ++F+
Sbjct: 438 FSLAGVISACASISSLELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDR 497
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
+ +D V WN+++ GY NG E L
Sbjct: 498 MMK---------------------------------SDEVPWNSMLMGYATNGHGIEALN 524
Query: 246 LFVRMGENGVRWNEHTFASALSAC--CGLRNVKCAKEIHSW--VLKNGLISNPFVS--SG 299
+F +M GV+ + TF LSAC CGL +E W +K NP + S
Sbjct: 525 VFDQMRSVGVQPTDITFVGVLSACDHCGL-----VEEGRKWFYAMKLDYHINPGIEHYSC 579
Query: 300 IVDVYCKC----ENMNYAESMLL 318
+VD+Y + + MN E M L
Sbjct: 580 MVDLYARAGLLEDAMNLIEQMPL 602
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 208/704 (29%), Positives = 371/704 (52%), Gaps = 71/704 (10%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
++ N +I Y ++ L+ +RKLFDEMPE+NV SWN++++ + + +AR LFD P +
Sbjct: 265 VSWNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPER 324
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEM----QSADEHI---------RMDEFTVTSTL 132
+ V++ M+ GY++ Y +A +F++M D+ I +D+ + +L
Sbjct: 325 NSVSWMVMISGYVHISDY-WEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSL 383
Query: 133 N------------------LCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
L N +H F +T + + ++ +++I +++C
Sbjct: 384 RPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFF--ETMPERNEYSWTTMIAAFAQCG 441
Query: 175 CYEEACRVFEGCTEEV------------------------------NLISKNAMVAACCR 204
++A +++E E+ N+++ NA++A +
Sbjct: 442 RLDDAIQLYERVPEQTVATKTAMMTAYAQVGRIQKARLIFDEILNPNVVAWNAIIAGYTQ 501
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFAS 264
G ++ A F + P N A SW +I+G+VQN ++ E L+L + + +G ++ +F S
Sbjct: 502 NGMLKEAKDLFQKMPVKNSA-SWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTS 560
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
ALSAC + +V+ + IHS +K G N +V +G++ +Y KC N+ + V++
Sbjct: 561 ALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKD 620
Query: 325 SFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVT 384
+ S +S+I G S +++AR F+ + +++VV WTA+ S YV+A + E DL + +
Sbjct: 621 TVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLA 680
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
+ G+ + L + LL AC A+ G++ HA I ++G + ++L+ MY KCG
Sbjct: 681 R-GIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG--- 736
Query: 445 YAE--IIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
Y + +F+ E DL+ +N ++ A +G ++AI +FE+M +GI PD ++F+ +L A
Sbjct: 737 YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCA 796
Query: 503 FRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAV 562
H G V+ G +FNSMT Y I P HY CM+DL GRA L +A ++++P + D+V
Sbjct: 797 CSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSV 856
Query: 563 ILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMR 622
I + L CR++RN EL E+L ++ A YV L+N++A++G W ++ IRK M+
Sbjct: 857 IWEALLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLMK 916
Query: 623 GMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTG 666
+ G SW+ V++++H F GD +H + IYS L + G
Sbjct: 917 DQGLTKEPGISWIQVKNKLHCFVTGDRTHDQIEEIYSALKEYYG 960
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 140/579 (24%), Positives = 245/579 (42%), Gaps = 136/579 (23%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLV 88
N I + + E+R++F+EM +R+V SWN++I+ ++ + +AR LFD+ K++
Sbjct: 175 NTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIR 234
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLH 148
T+ +L GY EG +A ++F M E V S
Sbjct: 235 TWTILLTGYAK-EGRIEEAREVFESMT---------ERNVVSW----------------- 267
Query: 149 AFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEM 208
+++I Y + + A ++F+ E+ N+ S N++V C M
Sbjct: 268 ---------------NAMISGYVQNGDLKNARKLFDEMPEK-NVASWNSVVTGYCHCYRM 311
Query: 209 EMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSA 268
A + F + PE N +VSW +ISGYV D E +FV+M R ++ F LSA
Sbjct: 312 SEARELFDQMPERN-SVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSA 370
Query: 269 CCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSI 328
GL +++ + +K G + V S I++ Y + +++ A RN +S
Sbjct: 371 ITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSW 430
Query: 329 SSMI-------------------------------VGYSLQGNMEEARRHFDSLTEKNVV 357
++MI Y+ G +++AR FD + NVV
Sbjct: 431 TTMIAAFAQCGRLDDAIQLYERVPEQTVATKTAMMTAYAQVGRIQKARLIFDEILNPNVV 490
Query: 358 VWTALFSGYVK---------------AQNCEALFDLLSEFVTKE---------------G 387
W A+ +GY + +N + +++ FV E G
Sbjct: 491 AWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSG 550
Query: 388 VVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGN----- 442
V L ACA + G+ IH+ ++ G Q + +++ L+ MY+KCGN
Sbjct: 551 SVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGS 610
Query: 443 --------------------------MTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
+ A ++F+ +RD+V + +I+ Y GH E
Sbjct: 611 HVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEV 670
Query: 477 AILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKY 515
A+ LF +ML +GIKP+ +T ++LSA + G++++GE++
Sbjct: 671 ALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQF 709
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 127/490 (25%), Positives = 234/490 (47%), Gaps = 49/490 (10%)
Query: 24 TTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP 83
T T ++ Y++ ++++R +FDE+ NV +WN II+ ++ LK+A+ LF P
Sbjct: 457 TVATKTAMMTAYAQVGRIQKARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMP 516
Query: 84 HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGF 143
K+ ++ +M+ G++ E +AL+L IE+ + F TS L+ C + +V
Sbjct: 517 VKNSASWAAMIAGFVQNE-ESREALELLIELHRSGSVPSDSSF--TSALSACANIGDVEI 573
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
GR +H+ +KT + + ++ LI MY+KC E+ VF + + +S N++++
Sbjct: 574 GRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVK-DTVSWNSLISGLS 632
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
++ A F + P+ D VSW +IS YVQ G E L LF+ M G++ N+ T
Sbjct: 633 ENYMLDDARVVFEKMPK-RDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVT 691
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
S LSAC L +K ++ H+ + K G + FV + ++ +Y KC G
Sbjct: 692 SLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKC-------------GYE 738
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC---EALFDLLS 380
+ F + F+ + E +++ W A+ G AQN EA+ +
Sbjct: 739 DGFCV-------------------FEEMPEHDLITWNAVLVGC--AQNGLGKEAI--KIF 775
Query: 381 EFVTKEGVVTDALILVILLGACALQAALHPG-KEIHAYILRMGVQMDKKLISTLVDMYSK 439
E + EG++ D + + +L AC+ + G ++ + G+ + +VD+ +
Sbjct: 776 EQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGR 835
Query: 440 CGNMTYAEIIFQNF-IERDLVLYNVMI-ACYAHHGHEEKAILLFEEMLEKGIKPDAVTFV 497
G ++ AE + +N ++ D V++ ++ AC H E + E L + KP + T+V
Sbjct: 836 AGYLSEAEALIENMPVKPDSVIWEALLGACRIHRNVELGQRV--AERLFQMTKPKSATYV 893
Query: 498 AILSAFRHCG 507
+ + F G
Sbjct: 894 LLSNLFASQG 903
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 161/339 (47%), Gaps = 41/339 (12%)
Query: 11 ICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSH 70
+ H AIK G + N LI +Y+K + + +F + ++ SWN++IS +++
Sbjct: 576 VIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENY 635
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
L AR +F+ P +D+V++ +++ Y+ A G+ AL LF++M + I+ ++ TVTS
Sbjct: 636 MLDDARVVFEKMPKRDVVSWTAIISAYVQA-GHGEVALDLFLDMLA--RGIKPNQLTVTS 692
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L+ C L + G Q HA + K D F +SLI MY KC YE+ VFE E
Sbjct: 693 LLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKC-GYEDGFCVFEEMPEH- 750
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
+LI+ NA++ C QNG +E +K+F +M
Sbjct: 751 DLITWNAVLVGCA--------------------------------QNGLGKEAIKIFEQM 778
Query: 251 GENGVRWNEHTFASALSAC--CGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
G+ ++ +F L AC GL + A +S K G++ + + +VD+ +
Sbjct: 779 EVEGILPDQMSFLGVLCACSHAGLVDEGWA-HFNSMTQKYGIMPLVYHYTCMVDLLGRAG 837
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGY-SLQGNMEEARR 346
++ AE+++ V+ I ++G + N+E +R
Sbjct: 838 YLSEAEALIENMPVKPDSVIWEALLGACRIHRNVELGQR 876
>gi|225427963|ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
[Vitis vinifera]
Length = 612
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 196/561 (34%), Positives = 312/561 (55%), Gaps = 5/561 (0%)
Query: 117 ADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASG-FAVSSLIDMYSKCRC 175
A +R+D T+ S L C + G+++H + T G F + LI+MY+KC
Sbjct: 51 ARRGLRLDSRTLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHLINMYAKCGK 110
Query: 176 YEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYV 235
EA +VF+ + NL S N M++ + G ++ A K F + PE D VSWNT++ +
Sbjct: 111 EVEARKVFDKMSAR-NLYSWNNMLSGYAKLGMIKPARKLFDKMPE-KDVVSWNTMVIAHA 168
Query: 236 QNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF 295
Q G +E L+ + + G++ N +FA L+ C L+ V +++H +L G +SN
Sbjct: 169 QCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVV 228
Query: 296 VSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKN 355
+SS ++D Y KC M A + R+ + ++M+ GY+ G+M+ A F + EKN
Sbjct: 229 LSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMPEKN 288
Query: 356 VVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIH 415
V WTAL SGY + +L ++ + V D L ACA A+L GK+IH
Sbjct: 289 PVSWTALISGYARNGMGHKALELFTKMMLFH-VRPDQFTFSSCLCACASIASLKHGKQIH 347
Query: 416 AYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER-DLVLYNVMIACYAHHGHE 474
AY+LR+ Q + ++S L+DMYSKCG++ +F + D+VL+N +I+ A HG
Sbjct: 348 AYLLRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQHGCG 407
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC 534
E+AI + ++M+ G KPD +TFV IL+A H G V+ G +F SM+ DY I P +HYAC
Sbjct: 408 EEAIQMLDDMVRSGAKPDKITFVVILNACSHSGLVQQGLNFFESMSCDYGIVPSQEHYAC 467
Query: 535 MIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNN 594
+IDL GRA E+ ++ ++ +P + D + + L VCR++ + EL +A E+L+ LE +
Sbjct: 468 LIDLLGRAGCFEEVMDQLEKMPYKPDDRVWNALLGVCRIHGHIELGRKAAERLIELEPQS 527
Query: 595 KARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKT 654
YV L+++YA G W + ++R+ M + + SW+ +E+++H F+V D SHP
Sbjct: 528 STAYVLLSSIYAVLGRWESVQKVRQLMNERQVKKERAISWLEIENKVHSFSVSDSSHPLK 587
Query: 655 NAIYSVLAIFTGELYEIAGAF 675
IYSVL G++ E A F
Sbjct: 588 EQIYSVLEQLAGQMEEDASLF 608
Score = 195 bits (495), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 143/509 (28%), Positives = 250/509 (49%), Gaps = 51/509 (10%)
Query: 3 SLNLKEALICHVQAIKAGLTLT-TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
S L+E H+ GL T +N LI++Y+K E+RK+FD+M RN++SWN
Sbjct: 72 SRALREGKRVHLHLKLTGLKRPGTFLSNHLINMYAKCGKEVEARKVFDKMSARNLYSWNN 131
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
++S K +K AR LFD P KD+V++N+M+ + GY +AL+ + E + I
Sbjct: 132 MLSGYAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQC-GYWDEALRFYSEFRQLG--I 188
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+ + F+ L +CVKL VG RQ+H ++ ++ SS++D Y KC +A +
Sbjct: 189 QCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMGDARK 248
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F+ + ++++ MV+ + G+M+ A + F PE N VSW LISGY +NG
Sbjct: 249 LFDEMSAR-DVLAWTTMVSGYAKWGDMKSANELFVEMPEKN-PVSWTALISGYARNGMGH 306
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
+ L+LF +M VR ++ TF+S L AC + ++K K+IH+++L+ N V S ++
Sbjct: 307 KALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQPNTIVVSALI 366
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK-NVVVWT 360
D+Y KC G++ R+ FD + K +VV+W
Sbjct: 367 DMYSKC-------------------------------GSLGIGRKVFDLMGNKLDVVLWN 395
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE-IHAYIL 419
+ S + E +L + V + G D + V++L AC+ + G +
Sbjct: 396 TIISALAQHGCGEEAIQMLDDMV-RSGAKPDKITFVVILNACSHSGLVQQGLNFFESMSC 454
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER-----DLVLYNVMIACYAHHGHE 474
G+ ++ + L+D+ + G + E++ Q +E+ D ++N ++ HGH
Sbjct: 455 DYGIVPSQEHYACLIDLLGRAG--CFEEVMDQ--LEKMPYKPDDRVWNALLGVCRIHGHI 510
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAF 503
E E ++E ++P + T +LS+
Sbjct: 511 ELGRKAAERLIE--LEPQSSTAYVLLSSI 537
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 140/328 (42%), Gaps = 34/328 (10%)
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI-SNPFVSSGIVDVYCKCE 308
+ G+R + T AS L C R ++ K +H + GL F+S+ ++++Y KC
Sbjct: 50 LARRGLRLDSRTLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHLINMYAKCG 109
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
A + RN +S ++M+ GY+ G ++ AR+ FD + EK+VV W + + +
Sbjct: 110 KEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQ 169
Query: 369 AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK 428
+ SEF + G+ + +L C + +++H IL G +
Sbjct: 170 CGYWDEALRFYSEF-RQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVV 228
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
L S+++D Y KCG M A +F RD++ + M++ YA G + A LF EM EK
Sbjct: 229 LSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMPEKN 288
Query: 489 -------------------------------IKPDAVTFVAILSAFRHCGSVEMGEKYFN 517
++PD TF + L A S++ G K +
Sbjct: 289 PVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHG-KQIH 347
Query: 518 SMTADYKISPETDHYACMIDLYGRANQL 545
+ P T + +ID+Y + L
Sbjct: 348 AYLLRINFQPNTIVVSALIDMYSKCGSL 375
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 5/138 (3%)
Query: 381 EFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST-LVDMYSK 439
E + + G+ D+ L LL CA AL GK +H ++ G++ +S L++MY+K
Sbjct: 48 ENLARRGLRLDSRTLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHLINMYAK 107
Query: 440 CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
CG A +F R+L +N M++ YA G + A LF++M EK D V++ +
Sbjct: 108 CGKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEK----DVVSWNTM 163
Query: 500 LSAFRHCGSVEMGEKYFN 517
+ A CG + ++++
Sbjct: 164 VIAHAQCGYWDEALRFYS 181
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 206/665 (30%), Positives = 340/665 (51%), Gaps = 104/665 (15%)
Query: 11 ICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSH 70
+ H IK+G + + + + +Y+K N+ ++ KLFDEM
Sbjct: 319 MVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEM------------------- 359
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
P +D+ ++N+++ Y +G AL+LF EM+ + + D T+T+
Sbjct: 360 ------------PERDVASWNNVISCYYQ-DGQPEKALELFEEMKVSG--FKPDSVTLTT 404
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
++ C +LL++ G+++H +V++ GF S+L+DMY KC C E A VFE
Sbjct: 405 VISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFE------ 458
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
Q + + VSWN++I+GY GD++ ++LF RM
Sbjct: 459 ---------------------------QIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRM 491
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
E G+R T +S L AC N++ K IH ++++N + ++ FV+S ++D+Y KC N+
Sbjct: 492 DEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNI 551
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
AE++ F ++ + NVV W + SGYVK
Sbjct: 552 GSAENV-------------------------------FQNMPKTNVVSWNVMISGYVKVG 580
Query: 371 N-CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
+ EAL ++ + K GV DA+ +L AC+ A L GKEIH +I+ +++++ +
Sbjct: 581 SYLEAL--VIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVV 638
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+ L+DMY+KCG + A IF ERD V + MIA Y HG +A+ LFE+M +
Sbjct: 639 MGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDA 698
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
KPD VTF+AILSA H G V+ G YFN M A+Y P +HY+C+IDL GR +L +A
Sbjct: 699 KPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAY 758
Query: 550 EFMKSIP-TEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAE 608
E ++ P ED +L + + C L++ +L + L+ + ++ + Y+ L+N+YA+
Sbjct: 759 EILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASV 818
Query: 609 GNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTG-- 666
W E+ ++R +++ + + GCSW+ V IH F V D SHP+ + IY ++I
Sbjct: 819 KKWDEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQADMIYECMSILASHV 878
Query: 667 ELYEI 671
E Y++
Sbjct: 879 EKYQV 883
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 119/474 (25%), Positives = 202/474 (42%), Gaps = 105/474 (22%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R L+L+ H++ +++G L ++ L+ +Y K L ++++F+++ +NV SW
Sbjct: 411 RLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSW-- 468
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
NSM+ GY + +G ++LF M +E I
Sbjct: 469 -----------------------------NSMIAGY-SLKGDSKSCIELFRRMD--EEGI 496
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
R T++S L C + +N+ G+ +H ++++ +A F SSLID+Y KC
Sbjct: 497 RPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKC-------- 548
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
G + A F P+ N VSWN +ISGYV+ G
Sbjct: 549 ------------------------GNIGSAENVFQNMPKTN-VVSWNVMISGYVKVGSYL 583
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E L +F M + GV+ + TF S L AC L ++ KEIH++++++ L N V ++
Sbjct: 584 EALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALL 643
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D+Y KC G ++EA F+ L E++ V WT+
Sbjct: 644 DMYAKC-------------------------------GAVDEALHIFNQLPERDFVSWTS 672
Query: 362 LFSGY-VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG-KEIHAYIL 419
+ + Y Q EAL L E + + D + + +L AC+ + G + I
Sbjct: 673 MIAAYGSHGQAFEAL--KLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIA 730
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF--IERDLVLYNVMI-ACYAH 470
G + + S L+D+ + G + A I Q I D+ L + + AC+ H
Sbjct: 731 EYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLH 784
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 5/154 (3%)
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER--DLVLYNVMIACY 468
GK IH I+ +G+Q + L +L+++Y C A+++FQ IE D+ L+N ++A
Sbjct: 214 GKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQT-IENPLDITLWNGLMAAC 272
Query: 469 AHHGHEEKAILLFEEMLE-KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISP 527
+ + + +F +L +KPDA T+ ++L A G V G K ++ +
Sbjct: 273 TKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYG-KMVHTHVIKSGFAM 331
Query: 528 ETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDA 561
+ + + +Y + N E AI+ +P + A
Sbjct: 332 DVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVA 365
>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
Length = 861
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 207/606 (34%), Positives = 329/606 (54%), Gaps = 58/606 (9%)
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAE-GYEADALKLFIEMQSADEHIRMDEF 126
K +++ A+ LFD+S + + +YN+M+ GY E G++A L LF + S+ + DE
Sbjct: 286 KCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKA--LLLFHRLMSSG--LGFDEI 341
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
+++ C + + G Q++ +K+S ++ IDMY KC+ EA RVF+
Sbjct: 342 SLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFD-- 399
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
EM + DAVSWN +I+ + QNG E L L
Sbjct: 400 ----------------------EMRRR---------DAVSWNAIIAAHEQNGKGYETLFL 428
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
FV M + + +E TF S L AC G ++ EIHS ++K+G+ SN V ++D+Y K
Sbjct: 429 FVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSK 487
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
C + AE + S ++ G MEE + + ++ V W ++ SGY
Sbjct: 488 CGMIEEAEKIH-----------SRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGY 536
Query: 367 V---KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
V ++++ + LF + E G+ D +L CA A+ GK+IHA +++ +
Sbjct: 537 VMKEQSEDAQMLFTRMMEM----GITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKEL 592
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
Q D + STLVDMYSKCG++ + ++F+ + RD V +N MI YAHHG E+AI LFE
Sbjct: 593 QSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFER 652
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRAN 543
M+ + IKP+ VTF++IL A H G ++ G +YF M DY + P+ HY+ M+D+ G++
Sbjct: 653 MILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSG 712
Query: 544 QLEKAIEFMKSIPTEEDAVILGSFLNVCRLNR-NAELAGEAEEKLLRLEGNNKARYVQLA 602
++++A+E ++ +P E D VI + L VC ++R N E+A EA LLRL+ + + Y L+
Sbjct: 713 KVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLS 772
Query: 603 NVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLA 662
NVYA G W ++ +R+ MRG K + GCSWV ++ E+H+F VGD +HP+ IY L
Sbjct: 773 NVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELG 832
Query: 663 IFTGEL 668
+ E+
Sbjct: 833 LIYSEM 838
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 146/536 (27%), Positives = 249/536 (46%), Gaps = 70/536 (13%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H I +G TT N L+ +Y+ + +FD+MP R+V SWN +I+ KS+D+
Sbjct: 29 HAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDM 88
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+A S F+ P +D+V++NSML GY+ G ++++F++M E I D T L
Sbjct: 89 FKANSFFNMMPVRDVVSWNSMLSGYLQ-NGESLKSIEVFVDM--GREGIEFDGRTFAIIL 145
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+C L + G Q+H +V+ D A S+L+DMY+K + + E+ RVF+G E+ N
Sbjct: 146 KVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEK-NS 204
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+S +A++A C + + +ALK F ++N VS
Sbjct: 205 VSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVS-------------------------- 238
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+ +AS L +C L ++ ++H+ LK+ ++ V + +D+Y KC+NM
Sbjct: 239 ------QSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQD 292
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
A+ + N S ++MI GYS + F +L
Sbjct: 293 AQILFDNSENLNRQSYNAMITGYS------QEEHGFKAL--------------------- 325
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
LL + G+ D + L + ACAL L G +I+ ++ + +D + +
Sbjct: 326 -----LLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANA 380
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
+DMY KC + A +F RD V +N +IA + +G + + LF ML I+PD
Sbjct: 381 AIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPD 440
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
TF +IL A GS+ G + +S+ ++ + +ID+Y + +E+A
Sbjct: 441 EFTFGSILKACTG-GSLGYGMEIHSSIVKS-GMASNSSVGCSLIDMYSKCGMIEEA 494
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 133/476 (27%), Positives = 211/476 (44%), Gaps = 85/476 (17%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L E L + AIK+ L+L N I +Y K L E+ ++FDEM R+ SWN II+A
Sbjct: 356 LSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAA 415
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
H+ N +GYE L LF+ M + I DE
Sbjct: 416 ------------------HEQ------------NGKGYE--TLFLFVSMLRS--RIEPDE 441
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
FT S L C ++G+G ++H+ +VK+ ++ SLIDMYSKC EEA ++
Sbjct: 442 FTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSR 500
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
+ N+ G ME L+ + VSWN++ISGYV +E+
Sbjct: 501 FFQRANV------------SGTME-ELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQM 547
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
LF RM E G+ ++ T+A+ L C L + K+IH+ V+K L S+ ++ S +VD+Y
Sbjct: 548 LFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYS 607
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
KC G++ ++R F+ ++ V W A+ G
Sbjct: 608 KC-------------------------------GDLHDSRLMFEKSLRRDFVTWNAMICG 636
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
Y E L + E + + + + +L ACA + G E + Y+++ +
Sbjct: 637 YAHHGKGEEAIQLFERMIL-ENIKPNHVTFISILRACAHMGLIDKGLE-YFYMMKRDYGL 694
Query: 426 DKKL--ISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMIA-CYAHHGHEEKA 477
D +L S +VD+ K G + A E+I + E D V++ ++ C H + E A
Sbjct: 695 DPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVA 750
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 199/432 (46%), Gaps = 44/432 (10%)
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
C K + G+Q HA M+ + + F ++ L+ +Y+ R + A VF+ +++S
Sbjct: 16 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLR-DVVS 74
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
N M+ + +M A +F+ + D VSWN+++SGY+QNG++ + +++FV MG G
Sbjct: 75 WNKMINGYSKSNDMFKA-NSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREG 133
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
+ ++ TFA L C L + +IH V++ G ++ +S ++D+Y K + + E
Sbjct: 134 IEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGK--RFVE 191
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEA 374
S+ + +G+ EKN V W+A+ +G V+
Sbjct: 192 SLRVFQGI-----------------------------PEKNSVSWSAIIAGCVQNNLLSL 222
Query: 375 LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLV 434
E V+ + I +L +CA + L G ++HA+ L+ D + + +
Sbjct: 223 ALKFFKEMQKVNAGVSQS-IYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATL 281
Query: 435 DMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAV 494
DMY+KC NM A+I+F N + YN MI Y+ H KA+LLF ++ G+ D +
Sbjct: 282 DMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEI 341
Query: 495 TFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACM----IDLYGRANQLEKAIE 550
+ + FR C V+ + K S D C+ ID+YG+ L +A
Sbjct: 342 SLSGV---FRACALVKGLSEGLQIYGLAIKSSLSLD--VCVANAAIDMYGKCQALAEAFR 396
Query: 551 FMKSIPTEEDAV 562
+ DAV
Sbjct: 397 VFDEM-RRRDAV 407
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 152/328 (46%), Gaps = 34/328 (10%)
Query: 273 RNVKCAKE--------IHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
R+V+CAK+ H+ ++ +G FV + ++ VY + A + +R+
Sbjct: 12 RSVECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRD 71
Query: 325 SFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVT 384
S + MI GYS +M +A F+ + ++VV W ++ SGY+ QN E+L + FV
Sbjct: 72 VVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYL--QNGESL-KSIEVFVD 128
Query: 385 --KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGN 442
+EG+ D I+L C+ G +IH ++R+G D S L+DMY+K
Sbjct: 129 MGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKR 188
Query: 443 MTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
+ +FQ E++ V ++ +IA + A+ F+EM + + ++L
Sbjct: 189 FVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVL-- 246
Query: 503 FRHCGSVEM----GEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE 558
R C ++ G+ + +++ +D+ + + +D+Y + + ++ A
Sbjct: 247 -RSCAALSELRLGGQLHAHALKSDF--AADGIVRTATLDMYAKCDNMQDA---------- 293
Query: 559 EDAVILGSFLNVCRLNRNAELAGEAEEK 586
++ + N+ R + NA + G ++E+
Sbjct: 294 --QILFDNSENLNRQSYNAMITGYSQEE 319
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 224/670 (33%), Positives = 342/670 (51%), Gaps = 74/670 (11%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R L+ ++L H IK+ + +T +N I +YSK L +RK F ++ + NVFS+N
Sbjct: 22 RDLSTGKSL--HSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPNVFSFNA 79
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
II+A K A LFD P DLV+YN+++ Y + G A AL LF M+ +
Sbjct: 80 IIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADC-GETAPALGLFSGMREMG--L 136
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
MD FT+++ + C +VG QLH+ AVSS D Y
Sbjct: 137 DMDXFTLSAVITACCD--DVGLIGQLHSV-----------AVSSGFDSYVS--------- 174
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
VN NA++ + G+++ A + F+ + D VSWN++I Y Q+ +
Sbjct: 175 --------VN----NALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGS 222
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
+ L LF M G+ + T AS L+A L ++ + H ++K G N V SG++
Sbjct: 223 KALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLI 282
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D+Y KC G M + R+ F+ +TE ++V+W
Sbjct: 283 DLYSKC------------------------------GGGMSDCRKVFEEITEPDLVLWNT 312
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGV--VTDALILVILLGACALQAALHPGKEIHAYIL 419
+ SGY +QN E L D L F +G+ + V ++ AC+ ++ GK+IH+ L
Sbjct: 313 MVSGY--SQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLAL 370
Query: 420 RMGVQMDK-KLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
+ + ++ + + L+ MYSKCGN+ A +F E + V N MIA YA HG E +++
Sbjct: 371 KSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESL 430
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
LF+ MLE+ I P ++TF+++LSA H G VE G YFN M + I PE +HY+CMIDL
Sbjct: 431 HLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDL 490
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARY 598
GRA +L +A + +P ++ S L CR + N ELA +A ++L+LE +N A Y
Sbjct: 491 LGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPY 550
Query: 599 VQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
V L+N+YA+ G W E+ +RK MR + GCSW+ V+ IH+F D SHP IY
Sbjct: 551 VVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIY 610
Query: 659 SVLAIFTGEL 668
L +G++
Sbjct: 611 EFLEEMSGKM 620
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 117/444 (26%), Positives = 204/444 (45%), Gaps = 48/444 (10%)
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L C+ ++ G+ LH+ +K+ S + + I +YSKC A + F+ ++ N
Sbjct: 15 LKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDP-N 73
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
+ S NA++AA +E +A + F + PE D VS+NTLIS Y G+ L LF M
Sbjct: 74 VFSFNAIIAAYAKESRPLIAHQLFDQIPE-PDLVSYNTLISAYADCGETAPALGLFSGMR 132
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
E G+ + T ++ ++ACC +V ++HS + +G S V++ ++ Y K +++
Sbjct: 133 EMGLDMDXFTLSAVITACC--DDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLD 190
Query: 312 YAESMLL-LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
A+ + + G+R+ S +SMIV Y G +E +
Sbjct: 191 DAKRVFYGMGGIRDEVSWNSMIVAY---GQHQEGSK------------------------ 223
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
L E V + G+ D L +L A L G + H +++ G + +
Sbjct: 224 ----ALGLFQEMV-RRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVG 278
Query: 431 STLVDMYSKC-GNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH-EEKAILLFEEMLEKG 488
S L+D+YSKC G M+ +F+ E DLVL+N M++ Y+ + E A+ F +M G
Sbjct: 279 SGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIG 338
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKY----FNSMTADYKISPETDHYACMIDLYGRANQ 544
+P+ +FV ++SA + S G++ S +IS + +I +Y +
Sbjct: 339 YRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDN----ALIAMYSKCGN 394
Query: 545 LEKAIEFMKSIPTEEDAVILGSFL 568
L+ A + E + V L S +
Sbjct: 395 LQDARRLFDRM-AEHNTVSLNSMI 417
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 147/345 (42%), Gaps = 15/345 (4%)
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
N + W F L C R++ K +HS +K+ + + + S+ + +Y KC + +
Sbjct: 2 NQISWTLQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAW 61
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
A N FS +++I Y+ + A + FD + E ++V + L S Y
Sbjct: 62 ARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGET 121
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
L S + + G+ D L ++ AC L ++H+ + G + +
Sbjct: 122 APALGLFSG-MREMGLDMDXFTLSAVITACCDDVGLI--GQLHSVAVSSGFDSYVSVNNA 178
Query: 433 LVDMYSKCGNMTYAEIIFQNFIE-RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
L+ Y K G++ A+ +F RD V +N MI Y H KA+ LF+EM+ +G+
Sbjct: 179 LLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNV 238
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY----GRANQLEK 547
D T ++L+AF C G F+ + + +IDLY G + K
Sbjct: 239 DMFTLASVLTAFT-CLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRK 297
Query: 548 AIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
E + TE D V+ + V ++N E +A E +++G
Sbjct: 298 VFEEI----TEPDLVLWNTM--VSGYSQNEEFLEDALECFRQMQG 336
>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 903
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 207/606 (34%), Positives = 329/606 (54%), Gaps = 58/606 (9%)
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAE-GYEADALKLFIEMQSADEHIRMDEF 126
K +++ A+ LFD+S + + +YN+M+ GY E G++A L LF + S+ + DE
Sbjct: 328 KCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKA--LLLFHRLMSSG--LGFDEI 383
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
+++ C + + G Q++ +K+S ++ IDMY KC+ EA RVF+
Sbjct: 384 SLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFD-- 441
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
EM + DAVSWN +I+ + QNG E L L
Sbjct: 442 ----------------------EMRRR---------DAVSWNAIIAAHEQNGKGYETLFL 470
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
FV M + + +E TF S L AC G ++ EIHS ++K+G+ SN V ++D+Y K
Sbjct: 471 FVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSK 529
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
C + AE + S ++ G MEE + + ++ V W ++ SGY
Sbjct: 530 CGMIEEAEKIH-----------SRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGY 578
Query: 367 V---KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
V ++++ + LF + E G+ D +L CA A+ GK+IHA +++ +
Sbjct: 579 VMKEQSEDAQMLFTRMMEM----GITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKEL 634
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
Q D + STLVDMYSKCG++ + ++F+ + RD V +N MI YAHHG E+AI LFE
Sbjct: 635 QSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFER 694
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRAN 543
M+ + IKP+ VTF++IL A H G ++ G +YF M DY + P+ HY+ M+D+ G++
Sbjct: 695 MILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSG 754
Query: 544 QLEKAIEFMKSIPTEEDAVILGSFLNVCRLNR-NAELAGEAEEKLLRLEGNNKARYVQLA 602
++++A+E ++ +P E D VI + L VC ++R N E+A EA LLRL+ + + Y L+
Sbjct: 755 KVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLS 814
Query: 603 NVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLA 662
NVYA G W ++ +R+ MRG K + GCSWV ++ E+H+F VGD +HP+ IY L
Sbjct: 815 NVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELG 874
Query: 663 IFTGEL 668
+ E+
Sbjct: 875 LIYSEM 880
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 147/538 (27%), Positives = 250/538 (46%), Gaps = 74/538 (13%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H I +G TT N L+ +Y+ + +FD+MP R+V SWN +I+ KS+D+
Sbjct: 71 HAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDM 130
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+A S F+ P +D+V++NSML GY+ G ++++F++M E I D T L
Sbjct: 131 FKANSFFNMMPVRDVVSWNSMLSGYLQ-NGESLKSIEVFVDM--GREGIEFDGRTFAIIL 187
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+C L + G Q+H +V+ D A S+L+DMY+K + + E+ RVF+G E+ N
Sbjct: 188 KVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEK-NS 246
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+S +A++A C + + +ALK F ++N VS
Sbjct: 247 VSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVS-------------------------- 280
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+ +AS L +C L ++ ++H+ LK+ ++ V + +D+Y KC+NM
Sbjct: 281 ------QSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQD 334
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
A+ + N S ++MI GYS + F +L
Sbjct: 335 AQILFDNSENLNRQSYNAMITGYS------QEEHGFKAL--------------------- 367
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
LL + G+ D + L + ACAL L G +I+ ++ + +D + +
Sbjct: 368 -----LLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANA 422
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
+DMY KC + A +F RD V +N +IA + +G + + LF ML I+PD
Sbjct: 423 AIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPD 482
Query: 493 AVTFVAILSAFRHC--GSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
TF +IL A C GS+ G + +S+ ++ + +ID+Y + +E+A
Sbjct: 483 EFTFGSILKA---CTGGSLGYGMEIHSSIVKS-GMASNSSVGCSLIDMYSKCGMIEEA 536
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 133/476 (27%), Positives = 211/476 (44%), Gaps = 85/476 (17%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L E L + AIK+ L+L N I +Y K L E+ ++FDEM R+ SWN II+A
Sbjct: 398 LSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAA 457
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
H+ N +GYE L LF+ M + I DE
Sbjct: 458 ------------------HEQ------------NGKGYE--TLFLFVSMLRS--RIEPDE 483
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
FT S L C ++G+G ++H+ +VK+ ++ SLIDMYSKC EEA ++
Sbjct: 484 FTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSR 542
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
+ N+ G ME L+ + VSWN++ISGYV +E+
Sbjct: 543 FFQRANV------------SGTME-ELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQM 589
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
LF RM E G+ ++ T+A+ L C L + K+IH+ V+K L S+ ++ S +VD+Y
Sbjct: 590 LFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYS 649
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
KC G++ ++R F+ ++ V W A+ G
Sbjct: 650 KC-------------------------------GDLHDSRLMFEKSLRRDFVTWNAMICG 678
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
Y E L + E + + + + +L ACA + G E + Y+++ +
Sbjct: 679 YAHHGKGEEAIQLFERMIL-ENIKPNHVTFISILRACAHMGLIDKGLE-YFYMMKRDYGL 736
Query: 426 DKKL--ISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMIA-CYAHHGHEEKA 477
D +L S +VD+ K G + A E+I + E D V++ ++ C H + E A
Sbjct: 737 DPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVA 792
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 199/432 (46%), Gaps = 44/432 (10%)
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
C K + G+Q HA M+ + + F ++ L+ +Y+ R + A VF+ +++S
Sbjct: 58 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLR-DVVS 116
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
N M+ + +M A +F+ + D VSWN+++SGY+QNG++ + +++FV MG G
Sbjct: 117 WNKMINGYSKSNDMFKA-NSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREG 175
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
+ ++ TFA L C L + +IH V++ G ++ +S ++D+Y K + + E
Sbjct: 176 IEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGK--RFVE 233
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEA 374
S+ + +G+ EKN V W+A+ +G V+
Sbjct: 234 SLRVFQGI-----------------------------PEKNSVSWSAIIAGCVQNNLLSL 264
Query: 375 LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLV 434
E V+ + I +L +CA + L G ++HA+ L+ D + + +
Sbjct: 265 ALKFFKEMQKVNAGVSQS-IYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATL 323
Query: 435 DMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAV 494
DMY+KC NM A+I+F N + YN MI Y+ H KA+LLF ++ G+ D +
Sbjct: 324 DMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEI 383
Query: 495 TFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACM----IDLYGRANQLEKAIE 550
+ + FR C V+ + K S D C+ ID+YG+ L +A
Sbjct: 384 SLSGV---FRACALVKGLSEGLQIYGLAIKSSLSLD--VCVANAAIDMYGKCQALAEAFR 438
Query: 551 FMKSIPTEEDAV 562
+ DAV
Sbjct: 439 VFDEM-RRRDAV 449
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 151/331 (45%), Gaps = 26/331 (7%)
Query: 262 FASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKG 321
F+ C ++ K+ H+ ++ +G FV + ++ VY + A +
Sbjct: 51 FSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMP 110
Query: 322 VRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSE 381
+R+ S + MI GYS +M +A F+ + ++VV W ++ SGY+ QN E+L +
Sbjct: 111 LRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYL--QNGESL-KSIEV 167
Query: 382 FVT--KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
FV +EG+ D I+L C+ G +IH ++R+G D S L+DMY+K
Sbjct: 168 FVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAK 227
Query: 440 CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
+ +FQ E++ V ++ +IA + A+ F+EM + + ++
Sbjct: 228 GKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASV 287
Query: 500 LSAFRHCGSVEM----GEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSI 555
L R C ++ G+ + +++ +D+ + + +D+Y + + ++ A
Sbjct: 288 L---RSCAALSELRLGGQLHAHALKSDF--AADGIVRTATLDMYAKCDNMQDA------- 335
Query: 556 PTEEDAVILGSFLNVCRLNRNAELAGEAEEK 586
++ + N+ R + NA + G ++E+
Sbjct: 336 -----QILFDNSENLNRQSYNAMITGYSQEE 361
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 224/670 (33%), Positives = 342/670 (51%), Gaps = 74/670 (11%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R L+ ++L H IK+ + +T +N I +YSK L +RK F ++ + NVFS+N
Sbjct: 22 RDLSTGKSL--HSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPNVFSFNA 79
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
II+A K A LFD P DLV+YN+++ Y + G A AL LF M+ +
Sbjct: 80 IIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADC-GETAPALGLFSGMREMG--L 136
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
MD FT+++ + C +VG QLH+ AVSS D Y
Sbjct: 137 DMDGFTLSAVITACCD--DVGLIGQLHSV-----------AVSSGFDSYVS--------- 174
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
VN NA++ + G+++ A + F+ + D VSWN++I Y Q+ +
Sbjct: 175 --------VN----NALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGS 222
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
+ L LF M G+ + T AS L+A L ++ + H ++K G N V SG++
Sbjct: 223 KALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLI 282
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D+Y KC G M + R+ F+ +TE ++V+W
Sbjct: 283 DLYSKC------------------------------GGGMSDCRKVFEEITEPDLVLWNT 312
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGV--VTDALILVILLGACALQAALHPGKEIHAYIL 419
+ SGY +QN E L D L F +G+ + V ++ AC+ ++ GK+IH+ L
Sbjct: 313 MVSGY--SQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLAL 370
Query: 420 RMGVQMDK-KLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
+ + ++ + + L+ MYSKCGN+ A +F E + V N MIA YA HG E +++
Sbjct: 371 KSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESL 430
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
LF+ MLE+ I P ++TF+++LSA H G VE G YFN M + I PE +HY+CMIDL
Sbjct: 431 HLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDL 490
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARY 598
GRA +L +A + +P ++ S L CR + N ELA +A ++L+LE +N A Y
Sbjct: 491 LGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPY 550
Query: 599 VQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
V L+N+YA+ G W E+ +RK MR + GCSW+ V+ IH+F D SHP IY
Sbjct: 551 VVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIY 610
Query: 659 SVLAIFTGEL 668
L +G++
Sbjct: 611 EFLEEMSGKM 620
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 117/444 (26%), Positives = 204/444 (45%), Gaps = 48/444 (10%)
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L C+ ++ G+ LH+ +K+ S + + I +YSKC A + F+ ++ N
Sbjct: 15 LKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDP-N 73
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
+ S NA++AA +E +A + F + PE D VS+NTLIS Y G+ L LF M
Sbjct: 74 VFSFNAIIAAYAKESRPLIAHQLFDQIPE-PDLVSYNTLISAYADCGETAPALGLFSGMR 132
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
E G+ + T ++ ++ACC +V ++HS + +G S V++ ++ Y K +++
Sbjct: 133 EMGLDMDGFTLSAVITACC--DDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLD 190
Query: 312 YAESMLL-LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
A+ + + G+R+ S +SMIV Y G +E +
Sbjct: 191 DAKRVFYGMGGIRDEVSWNSMIVAY---GQHQEGSK------------------------ 223
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
L E V + G+ D L +L A L G + H +++ G + +
Sbjct: 224 ----ALGLFQEMV-RRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVG 278
Query: 431 STLVDMYSKC-GNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH-EEKAILLFEEMLEKG 488
S L+D+YSKC G M+ +F+ E DLVL+N M++ Y+ + E A+ F +M G
Sbjct: 279 SGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIG 338
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKY----FNSMTADYKISPETDHYACMIDLYGRANQ 544
+P+ +FV ++SA + S G++ S +IS + +I +Y +
Sbjct: 339 YRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDN----ALIAMYSKCGN 394
Query: 545 LEKAIEFMKSIPTEEDAVILGSFL 568
L+ A + E + V L S +
Sbjct: 395 LQDARRLFDRM-AEHNTVSLNSMI 417
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 147/345 (42%), Gaps = 15/345 (4%)
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
N + W F L C R++ K +HS +K+ + + + S+ + +Y KC + +
Sbjct: 2 NQISWTLQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAW 61
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
A N FS +++I Y+ + A + FD + E ++V + L S Y
Sbjct: 62 ARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGET 121
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
L S + + G+ D L ++ AC L ++H+ + G + +
Sbjct: 122 APALGLFSG-MREMGLDMDGFTLSAVITACCDDVGLI--GQLHSVAVSSGFDSYVSVNNA 178
Query: 433 LVDMYSKCGNMTYAEIIFQNFIE-RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
L+ Y K G++ A+ +F RD V +N MI Y H KA+ LF+EM+ +G+
Sbjct: 179 LLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNV 238
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY----GRANQLEK 547
D T ++L+AF C G F+ + + +IDLY G + K
Sbjct: 239 DMFTLASVLTAFT-CLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRK 297
Query: 548 AIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
E + TE D V+ + V ++N E +A E +++G
Sbjct: 298 VFEEI----TEPDLVLWNTM--VSGYSQNEEFLEDALECFRQMQG 336
>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 861
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 207/606 (34%), Positives = 328/606 (54%), Gaps = 58/606 (9%)
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAE-GYEADALKLFIEMQSADEHIRMDEF 126
K +++ A+ LFD S + + +YN+M+ GY E G++A L LF + S+ + DE
Sbjct: 286 KCDNMQDAQILFDKSENLNRQSYNAMITGYSQEEHGFKA--LLLFHRLMSSG--LGFDEI 341
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
+++ C + + G Q++ +K+S ++ IDMY KC+ EA RVF+
Sbjct: 342 SLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFD-- 399
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
EM + DAVSWN +I+ + QNG E L L
Sbjct: 400 ----------------------EMRRR---------DAVSWNAIIAAHEQNGKGYETLFL 428
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
FV M + + +E TF S L AC G ++ EIHS ++K+G+ SN V ++D+Y K
Sbjct: 429 FVSMLRSRIEPDEFTFGSVLKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSK 487
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
C + AE + S ++ G MEE + + ++ V W ++ SGY
Sbjct: 488 CGMIEEAEKIH-----------SRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGY 536
Query: 367 V---KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
V ++++ + LF + E G+ D +L CA A+ GK+IHA +++ +
Sbjct: 537 VMKEQSEDAQMLFTRMMEM----GITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKEL 592
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
Q D + STLVDMYSKCG++ + ++F+ + RD V +N MI YAHHG E+AI LFE
Sbjct: 593 QSDVYISSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFER 652
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRAN 543
M+ + IKP+ VTF++IL A H G ++ G +YF M DY + P+ HY+ M+D+ G++
Sbjct: 653 MILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSG 712
Query: 544 QLEKAIEFMKSIPTEEDAVILGSFLNVCRLNR-NAELAGEAEEKLLRLEGNNKARYVQLA 602
++++A+E ++ +P E D VI + L VC ++R N E+A EA LLRL+ + + Y L+
Sbjct: 713 KVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLS 772
Query: 603 NVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLA 662
NVYA G W ++ +R+ MRG K + GCSWV ++ E+H+F VGD +HP+ IY L
Sbjct: 773 NVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELG 832
Query: 663 IFTGEL 668
+ E+
Sbjct: 833 LIYSEM 838
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 142/536 (26%), Positives = 246/536 (45%), Gaps = 70/536 (13%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H I +G TT N L+ +Y+ + +FD MP R+V SWN +I+ KS+++
Sbjct: 29 HAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSWNKMINGYAKSNNM 88
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+A F+ P +D+V++NSML GY+ G ++++F++M A D T L
Sbjct: 89 VKASFFFNMMPVRDVVSWNSMLSGYLQ-NGETLKSIEVFVDMGRAGTEF--DGRTFAIIL 145
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+C L + G Q+H +V+ D A S+L+DMY+K + + E+ RVF+G E+ N
Sbjct: 146 KVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEK-NS 204
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+S +A++A C + + +ALK F ++N VS
Sbjct: 205 VSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVS-------------------------- 238
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+ +AS L +C L ++ ++H+ LK+ ++ V + +D+Y KC+NM
Sbjct: 239 ------QSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQD 292
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
A+ + N S ++MI GYS + F +L
Sbjct: 293 AQILFDKSENLNRQSYNAMITGYS------QEEHGFKAL--------------------- 325
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
LL + G+ D + L + ACAL L G +I+ ++ + +D + +
Sbjct: 326 -----LLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANA 380
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
+DMY KC + A +F RD V +N +IA + +G + + LF ML I+PD
Sbjct: 381 AIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPD 440
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
TF ++L A GS+ G + +S+ ++ + +ID+Y + +E+A
Sbjct: 441 EFTFGSVLKACTG-GSLGYGMEIHSSIVKS-GMASNSSVGCSLIDMYSKCGMIEEA 494
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 134/476 (28%), Positives = 212/476 (44%), Gaps = 85/476 (17%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L E L + AIK+ L+L N I +Y K L E+ ++FDEM R+ SWN II+A
Sbjct: 356 LSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAA 415
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
H+ N +GYE L LF+ M + I DE
Sbjct: 416 ------------------HEQ------------NGKGYE--TLFLFVSMLRS--RIEPDE 441
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
FT S L C ++G+G ++H+ +VK+ ++ SLIDMYSKC EEA ++
Sbjct: 442 FTFGSVLKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSR 500
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
+ N+ G ME L+ + VSWN++ISGYV +E+
Sbjct: 501 FFQRTNV------------SGTME-ELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQM 547
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
LF RM E G+ ++ T+A+ L C L + K+IH+ V+K L S+ ++SS +VD+Y
Sbjct: 548 LFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYISSTLVDMYS 607
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
KC G++ ++R F+ ++ V W A+ G
Sbjct: 608 KC-------------------------------GDLHDSRLMFEKSLRRDFVTWNAMICG 636
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
Y E L + E + + + + +L ACA + G E + Y+++ +
Sbjct: 637 YAHHGKGEEAIQLFERMIL-ENIKPNHVTFISILRACAHMGLIDKGLE-YFYMMKRDYGL 694
Query: 426 DKKL--ISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMIA-CYAHHGHEEKA 477
D +L S +VD+ K G + A E+I + E D V++ ++ C H + E A
Sbjct: 695 DPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVA 750
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 194/432 (44%), Gaps = 44/432 (10%)
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
C K + G+Q HA M+ + + F ++ L+ +Y+ R + A VF+ +++S
Sbjct: 16 CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLR-DVVS 74
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
N M+ + M A F P + D VSWN+++SGY+QNG+ + +++FV MG G
Sbjct: 75 WNKMINGYAKSNNMVKASFFFNMMP-VRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAG 133
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
++ TFA L C L + +IH V++ G ++ +S ++D+Y K + + E
Sbjct: 134 TEFDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGK--RFVE 191
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEA 374
S+ + +G+ EKN V W+A+ +G V+
Sbjct: 192 SLRVFQGI-----------------------------PEKNSVSWSAIIAGCVQNNLLSL 222
Query: 375 LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLV 434
E V+ + I +L +CA + L G ++HA+ L+ D + + +
Sbjct: 223 ALKFFKEMQKVNAGVSQS-IYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATL 281
Query: 435 DMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAV 494
DMY+KC NM A+I+F + YN MI Y+ H KA+LLF ++ G+ D +
Sbjct: 282 DMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEI 341
Query: 495 TFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACM----IDLYGRANQLEKAIE 550
+ + FR C V+ + K S D C+ ID+YG+ L +A
Sbjct: 342 SLSGV---FRACALVKGLSEGLQIYDLAIKSSLSLD--VCVANAAIDMYGKCQALAEAFR 396
Query: 551 FMKSIPTEEDAV 562
+ DAV
Sbjct: 397 VFDEM-RRRDAV 407
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 206/665 (30%), Positives = 340/665 (51%), Gaps = 104/665 (15%)
Query: 11 ICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSH 70
+ H IK+G + + + + +Y+K N+ ++ KLFDEM
Sbjct: 127 MVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEM------------------- 167
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
P +D+ ++N+++ Y +G AL+LF EM+ + + D T+T+
Sbjct: 168 ------------PERDVASWNNVISCYYQ-DGQPEKALELFEEMKVSG--FKPDSVTLTT 212
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
++ C +LL++ G+++H +V++ GF S+L+DMY KC C E A VFE
Sbjct: 213 VISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFE------ 266
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
Q + + VSWN++I+GY GD++ ++LF RM
Sbjct: 267 ---------------------------QIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRM 299
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
E G+R T +S L AC N++ K IH ++++N + ++ FV+S ++D+Y KC N+
Sbjct: 300 DEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNI 359
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
AE++ F ++ + NVV W + SGYVK
Sbjct: 360 GSAENV-------------------------------FQNMPKTNVVSWNVMISGYVKVG 388
Query: 371 N-CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
+ EAL ++ + K GV DA+ +L AC+ A L GKEIH +I+ +++++ +
Sbjct: 389 SYLEAL--VIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVV 446
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+ L+DMY+KCG + A IF ERD V + MIA Y HG +A+ LFE+M +
Sbjct: 447 MGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDA 506
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
KPD VTF+AILSA H G V+ G YFN M A+Y P +HY+C+IDL GR +L +A
Sbjct: 507 KPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAY 566
Query: 550 EFMKSIP-TEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAE 608
E ++ P ED +L + + C L++ +L + L+ + ++ + Y+ L+N+YA+
Sbjct: 567 EILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASV 626
Query: 609 GNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTG-- 666
W E+ ++R +++ + + GCSW+ V IH F V D SHP+ + IY ++I
Sbjct: 627 KKWDEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQADMIYECMSILASHV 686
Query: 667 ELYEI 671
E Y++
Sbjct: 687 EKYQV 691
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 128/508 (25%), Positives = 214/508 (42%), Gaps = 114/508 (22%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R L+L+ H++ +++G L ++ L+ +Y K L ++++F+++ +NV SW
Sbjct: 219 RLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSW-- 276
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
NSM+ GY + +G ++LF M +E I
Sbjct: 277 -----------------------------NSMIAGY-SLKGDSKSCIELFRRMD--EEGI 304
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
R T++S L C + +N+ G+ +H ++++ +A F SSLID+Y KC
Sbjct: 305 RPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKC-------- 356
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
G + A F P+ N VSWN +ISGYV+ G
Sbjct: 357 ------------------------GNIGSAENVFQNMPKTN-VVSWNVMISGYVKVGSYL 391
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E L +F M + GV+ + TF S L AC L ++ KEIH++++++ L N V ++
Sbjct: 392 EALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALL 451
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D+Y KC G ++EA F+ L E++ V WT+
Sbjct: 452 DMYAKC-------------------------------GAVDEALHIFNQLPERDFVSWTS 480
Query: 362 LFSGY-VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG-KEIHAYIL 419
+ + Y Q EAL L E + + D + + +L AC+ + G + I
Sbjct: 481 MIAAYGSHGQAFEAL--KLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIA 538
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF--IERDLVLYNVMI-ACYAHHG---H 473
G + + S L+D+ + G + A I Q I D+ L + + AC+ H
Sbjct: 539 EYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLG 598
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILS 501
E+ LL E+ PD + ILS
Sbjct: 599 EQIGRLLIEK------DPDDPSTYIILS 620
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 5/174 (2%)
Query: 391 DALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIF 450
D L+ LL C L GK IH I+ +G+Q + L +L+++Y C A+++F
Sbjct: 2 DTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVF 61
Query: 451 QNFIER--DLVLYNVMIACYAHHGHEEKAILLFEEMLE-KGIKPDAVTFVAILSAFRHCG 507
Q IE D+ L+N ++A + + + +F +L +KPDA T+ ++L A G
Sbjct: 62 QT-IENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLG 120
Query: 508 SVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDA 561
V G K ++ + + + + +Y + N E AI+ +P + A
Sbjct: 121 RVGYG-KMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVA 173
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 351 bits (900), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 207/646 (32%), Positives = 343/646 (53%), Gaps = 56/646 (8%)
Query: 24 TTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP 83
+T+T N +I Y +N +RK+F++MP+R++ SWN ++S +K+ +L AR+LF+ P
Sbjct: 90 STVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMP 149
Query: 84 HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGF 143
KD+V++N+ML G+ G+ +A K+F D+ + +E + L+ V+ +
Sbjct: 150 EKDVVSWNAMLSGFAQ-NGFVEEARKIF------DQMLVKNEISWNGLLSAYVQNGRIED 202
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
R+L + D + + L+ Y + + ++A +F+ + IS N M+
Sbjct: 203 ARRL----FDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVR-DKISWNIMITGYA 257
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE-NGVRWNEHTF 262
+ G + A + F P + D +W ++SG+VQNG +E ++F M E N V WN
Sbjct: 258 QNGLLSEARRLFEELP-IRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWN---- 312
Query: 263 ASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGV 322
++ Y + + + A +
Sbjct: 313 ------------------------------------AMIAGYVQSQQIEKARELFDQMPS 336
Query: 323 RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF 382
RN+ S ++M+ GY+ GN+++A+ FD + +++ + W A+ SGY ++ E L +
Sbjct: 337 RNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIK- 395
Query: 383 VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGN 442
+ ++G + + L L +CA AAL GK++H +++ G Q + L+ MY KCG+
Sbjct: 396 MKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGS 455
Query: 443 MTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
+ A +F++ E+D+V +N MIA YA HG ++A+ LFE M + IKPD VT V +LSA
Sbjct: 456 IEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSA 514
Query: 503 FRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAV 562
H G V+ G +YFNSM +Y I+ HY CMIDL GRA +L++A+ MKS+P DA
Sbjct: 515 CSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAA 574
Query: 563 ILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMR 622
G+ L R++ + EL +A EK+ +E +N YV L+N+YAA G W E+ +R +MR
Sbjct: 575 TWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMR 634
Query: 623 GMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
+ G SWV ++++ HIFTVGD SHP+ IY+ L EL
Sbjct: 635 DKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLEL 680
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 136/535 (25%), Positives = 239/535 (44%), Gaps = 91/535 (17%)
Query: 21 LTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFD 80
L I+ N L+ Y ++ + ++R+LFD + + SWN ++ ++ L ARSLFD
Sbjct: 180 LVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFD 239
Query: 81 SSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLN 140
P +D +++N M+ GY G ++A +LF E+ IR D F T+ ++ V+
Sbjct: 240 RMPVRDKISWNIMITGYAQ-NGLLSEARRLFEELP-----IR-DVFAWTAMVSGFVQNGM 292
Query: 141 VGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVA 200
+ ++ M + + + +++I Y + + E+A +F+ N S N MV
Sbjct: 293 LDEATRIFEEMPEKNE----VSWNAMIAGYVQSQQIEKARELFDQMPSR-NTSSWNTMVT 347
Query: 201 ACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEH 260
+ G ++ A F P+ D +SW +ISGY Q+G +EE L LF++M +G N
Sbjct: 348 GYAQCGNIDQAKILFDEMPQ-RDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRS 406
Query: 261 TFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLK 320
A ALS+C + ++ K++H ++K G + + ++ +Y KC
Sbjct: 407 ALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKC------------- 453
Query: 321 GVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK---AQNCEALFD 377
G++EEA F+ +TEK++V W + +GY + + ALF+
Sbjct: 454 ------------------GSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFE 495
Query: 378 LLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMY 437
+ K + D + LV +L AC+ H G VD
Sbjct: 496 SM-----KMTIKPDDVTLVGVLSACS-----HTG---------------------FVDK- 523
Query: 438 SKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTF 496
M Y ++QN+ I + Y MI G ++A+ L + M PDA T+
Sbjct: 524 ----GMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSM---PFYPDAATW 576
Query: 497 VAILSAFRHCGSVEMGEKYFNSMTADYKISPE-TDHYACMIDLYGRANQLEKAIE 550
A+L A R G E+GEK + +++ P+ + Y + +LY + + + E
Sbjct: 577 GALLGASRIHGDTELGEKAAEKV---FEMEPDNSGMYVLLSNLYAASGRWREVRE 628
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 41/69 (59%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + +KAG I N L+ +Y K + E+ +F+++ E+++ SWNT+I+ +
Sbjct: 428 HGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFG 487
Query: 73 KQARSLFDS 81
K+A +LF+S
Sbjct: 488 KEALALFES 496
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 351 bits (900), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 207/646 (32%), Positives = 343/646 (53%), Gaps = 56/646 (8%)
Query: 24 TTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP 83
+T+T N +I Y +N +RK+F++MP+R++ SWN ++S +K+ +L AR+LF+ P
Sbjct: 90 STVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMP 149
Query: 84 HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGF 143
KD+V++N+ML G+ G+ +A K+F D+ + +E + L+ V+ +
Sbjct: 150 EKDVVSWNAMLSGFAQ-NGFVEEARKIF------DQMLVKNEISWNGLLSAYVQNGRIED 202
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
R+L + D + + L+ Y + + ++A +F+ + IS N M+
Sbjct: 203 ARRL----FDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVR-DKISWNIMITGYA 257
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE-NGVRWNEHTF 262
+ G + A + F P + D +W ++SG+VQNG +E ++F M E N V WN
Sbjct: 258 QNGLLSEARRLFEELP-IRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWN---- 312
Query: 263 ASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGV 322
++ Y + + + A +
Sbjct: 313 ------------------------------------AMIAGYVQSQQIEKARELFDQMPS 336
Query: 323 RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF 382
RN+ S ++M+ GY+ GN+++A+ FD + +++ + W A+ SGY ++ E L +
Sbjct: 337 RNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIK- 395
Query: 383 VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGN 442
+ ++G + + L L +CA AAL GK++H +++ G Q + L+ MY KCG+
Sbjct: 396 MKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGS 455
Query: 443 MTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
+ A +F++ E+D+V +N MIA YA HG ++A+ LFE M + IKPD VT V +LSA
Sbjct: 456 IEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSA 514
Query: 503 FRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAV 562
H G V+ G +YFNSM +Y I+ HY CMIDL GRA +L++A+ MKS+P DA
Sbjct: 515 CSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAA 574
Query: 563 ILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMR 622
G+ L R++ + EL +A EK+ +E +N YV L+N+YAA G W E+ +R +MR
Sbjct: 575 TWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMR 634
Query: 623 GMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
+ G SWV ++++ HIFTVGD SHP+ IY+ L EL
Sbjct: 635 DKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLEL 680
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 137/535 (25%), Positives = 240/535 (44%), Gaps = 91/535 (17%)
Query: 21 LTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFD 80
L I+ N L+ Y ++ + ++R+LFD + + SWN ++ ++ L ARSLFD
Sbjct: 180 LVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFD 239
Query: 81 SSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLN 140
P +D +++N M+ GY G ++A +LF E+ IR D F T+ ++ V+
Sbjct: 240 RMPVRDKISWNIMITGYAQ-NGLLSEARRLFEELP-----IR-DVFAWTAMVSGFVQNGM 292
Query: 141 VGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVA 200
+ ++ M + + + +++I Y + + E+A +F+ N S N MV
Sbjct: 293 LDEATRIFEEMPEKNE----VSWNAMIAGYVQSQQIEKARELFDQMPSR-NTSSWNTMVT 347
Query: 201 ACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEH 260
+ G ++ A F P+ D +SW +ISGY Q+G +EE L LF++M +G N
Sbjct: 348 GYAQCGNIDQAKILFDEMPQ-RDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRS 406
Query: 261 TFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLK 320
A ALS+C + ++ K++H ++K G + + ++ +Y KC
Sbjct: 407 ALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKC------------- 453
Query: 321 GVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK---AQNCEALFD 377
G++EEA F+ +TEK++V W + +GY + + ALF+
Sbjct: 454 ------------------GSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFE 495
Query: 378 LLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMY 437
+ K + D + LV +L AC+ H G LVD
Sbjct: 496 SM-----KMTIKPDDVTLVGVLSACS-----HTG---------------------LVDK- 523
Query: 438 SKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTF 496
M Y ++QN+ I + Y MI G ++A+ L + M PDA T+
Sbjct: 524 ----GMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSM---PFYPDAATW 576
Query: 497 VAILSAFRHCGSVEMGEKYFNSMTADYKISPE-TDHYACMIDLYGRANQLEKAIE 550
A+L A R G E+GEK + +++ P+ + Y + +LY + + + E
Sbjct: 577 GALLGASRIHGDTELGEKAAEKV---FEMEPDNSGMYVLLSNLYAASGRWREVRE 628
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 41/69 (59%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + +KAG I N L+ +Y K + E+ +F+++ E+++ SWNT+I+ +
Sbjct: 428 HGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFG 487
Query: 73 KQARSLFDS 81
K+A +LF+S
Sbjct: 488 KEALALFES 496
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 221/673 (32%), Positives = 357/673 (53%), Gaps = 60/673 (8%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTI 62
S+N + + H + IK G I N L+++Y+K L ++ K+F+E+P+ +VFSW +
Sbjct: 301 SMNYPNSEVLHAKLIKNGCV--GIRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVL 358
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
IS + G AD L LF +MQ D+ +
Sbjct: 359 ISGFARI--------------------------------GLSADVLGLFTKMQ--DQGVC 384
Query: 123 MDEFTVTSTLNLCVKLLNVG-FGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
++FT++ L C +N G+ +H ++++ D +S++D Y KCRC+ A +
Sbjct: 385 PNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEK 444
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F G E + +S N M+++ + G+M+ ++ F RQ DA SWNT+I G ++NG
Sbjct: 445 LF-GLMAEKDTVSWNIMMSSYLQIGDMQKSVDLF-RQLPGKDAASWNTMIDGLMRNGCER 502
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
L+L +M G +N+ TF+ AL L + K+IH+ VLK G++ + FV + ++
Sbjct: 503 VALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLI 562
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D+YCKC M A ++ K + SSM+ N EE+ D++ E V W++
Sbjct: 563 DMYCKCGEMEKAS--VIFKHLPQE---SSMM-------NSEESCD--DAVVES--VSWSS 606
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+ SGYV+ E S F+ V D L ++ ACA L G+++H YI ++
Sbjct: 607 MVSGYVQNGRFEDALKTFS-FMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKI 665
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
G +D L S+++DMY KCG++ A +IF +R++VL+ MI+ A HG +A+ LF
Sbjct: 666 GHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLF 725
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGR 541
E M+ +GI P+ V+FV +L+A H G +E G KYF M Y I P +H+ CM+DLYGR
Sbjct: 726 ELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGR 785
Query: 542 ANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQL 601
A +L + EF+ + + + + SFL+ CR+++N E+ +KLL LE + Y+
Sbjct: 786 AGRLNEIKEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELEPFDAGPYILF 845
Query: 602 ANVYAAEGNWAEMGRIRK--QMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYS 659
+++ A E W E +IR Q RG+K N SW+ +++++H F +GD SHP+ IYS
Sbjct: 846 SSICATEHRWEEAAKIRSLMQQRGVKKN--PSQSWIQLKNQVHSFVMGDRSHPQDTKIYS 903
Query: 660 VLAIFTGELYEIA 672
L G L EI
Sbjct: 904 YLDELIGRLKEIG 916
>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 754
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 207/651 (31%), Positives = 332/651 (50%), Gaps = 38/651 (5%)
Query: 24 TTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP 83
T N L+ Y++ L +R+LFD MP+ N+F+ N ++SA + L LF S P
Sbjct: 44 PTYVLNHLLTAYARSGRLPLARRLFDAMPDPNLFTRNALLSALAHARLLPDMDRLFASMP 103
Query: 84 HKDLVTYNSMLCGY---INAEGYEADALKLFIEMQSAD-EHIRMDEFTVTSTLNLCVKLL 139
+D V+YN+++ G+ L E D +R T++ + L
Sbjct: 104 QRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRITMSGMVMAASALG 163
Query: 140 NVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMV 199
+ GRQ+H +++ A F S L+DMY+K +A RVF+ + N++ N M+
Sbjct: 164 DRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVK-NVVMYNTMI 222
Query: 200 AACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNE 259
R +E A F + D+++W T+++G QNG E L +F RM GV ++
Sbjct: 223 TGLLRCKMVEEARGVFEAMVD-RDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQ 281
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLL 319
+TF S L+AC L + K+IH++ ++ N FV S +VD+Y KC ++ AE++
Sbjct: 282 YTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAV--- 338
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLL 379
F +T KN++ WTA+ GY + E +
Sbjct: 339 ----------------------------FRRMTCKNIISWTAMIVGYGQNGCGEEAVRVF 370
Query: 380 SEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
SE T +G+ + L ++ +CA A+L G + H L G++ + S LV +Y K
Sbjct: 371 SEMQT-DGIKPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGK 429
Query: 440 CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
CG++ A +F D V Y +++ YA G ++ I LFE+ML KG+KP+ VTF+ +
Sbjct: 430 CGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGV 489
Query: 500 LSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE 559
LSA G VE G YF+SM D+ I DHY CMIDLY R+ +L++A EF++ +P
Sbjct: 490 LSACSRSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCP 549
Query: 560 DAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRK 619
DA+ + L+ CRL + E+ A E LL+ + N A YV L +++A++G W+E+ +R+
Sbjct: 550 DAIGWATLLSACRLRGDMEIGKWAAENLLKTDPQNPASYVLLCSMHASKGEWSEVALLRR 609
Query: 620 QMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYE 670
MR + + GCSW+ ++ +HIF+ D SHP + IY L ++ E
Sbjct: 610 GMRDRQVKKEPGCSWIKYKNRVHIFSADDQSHPFSGTIYEKLQWLNSKMAE 660
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 132/502 (26%), Positives = 231/502 (46%), Gaps = 103/502 (20%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H Q ++ G T + L+ +Y+K L+ +++++FDEM +NV +NT+I+ ++ +
Sbjct: 172 HCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVMYNTMITGLLRCKMV 231
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
++AR +F++ +D +T+ +M+ G + G +++AL +F M++ E + +D++T S L
Sbjct: 232 EEARGVFEAMVDRDSITWTTMVTG-LTQNGLQSEALDVFRRMRA--EGVGIDQYTFGSIL 288
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C L G+Q+HA+ ++T D + F S+L+DMYSKCR A VF T + N+
Sbjct: 289 TACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCK-NI 347
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
IS W +I GY QNG EE +++F M
Sbjct: 348 IS--------------------------------WTAMIVGYGQNGCGEEAVRVFSEMQT 375
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+G++ N+ T S +S+C L +++ + H L +GL VSS +V +Y KC
Sbjct: 376 DGIKPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKC----- 430
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G++E+A R FD + + V +TAL SGY +
Sbjct: 431 --------------------------GSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKA 464
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG-KEIHAYILRMGVQMDKKLIS 431
+ DL + + K GV + + + +L AC+ + G H+ G+ + +
Sbjct: 465 KETIDLFEKMLLK-GVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHGIVLLDDHYT 523
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
++D+YS+ G + AE FI + M C P
Sbjct: 524 CMIDLYSRSGRLKEAE----EFIRQ-------MPRC-----------------------P 549
Query: 492 DAVTFVAILSAFRHCGSVEMGE 513
DA+ + +LSA R G +E+G+
Sbjct: 550 DAIGWATLLSACRLRGDMEIGK 571
Score = 39.7 bits (91), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L+E H A+ +GL ++ L+ +Y K + ++ +LFDEMP + S+ ++S
Sbjct: 397 SLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVS 456
Query: 65 ACIKSHDLKQARSLFD 80
+ K+ LF+
Sbjct: 457 GYAQFGKAKETIDLFE 472
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 225/689 (32%), Positives = 360/689 (52%), Gaps = 40/689 (5%)
Query: 9 ALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIK 68
A H I +G L N+LI IY K + +RKLFDE+P+ +V + T+I+A
Sbjct: 32 ARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTLITAYSA 91
Query: 69 SHDLKQARSLFDSSP--HKDLVTYNSMLCGYINA-EGYEADALKLFIEMQSADEHIRMDE 125
+LK AR +F+ +P +D V YN+M+ GY + +G+ A ++LF M+ A+ + D+
Sbjct: 92 LGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSA--IELFRAMRWAN--FQPDD 147
Query: 126 FTVTSTLNLCVKLL----NVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKC-------- 173
FT S L+ + G Q+H +VK + +++L+ +Y KC
Sbjct: 148 FTFASVLSASTLIFYDERQCG---QMHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSS 204
Query: 174 -RCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMA---LKTFWRQPELNDAVSWNT 229
A ++F+ + I ++ R G++ A L T QP ++WN
Sbjct: 205 SSLMASARKLFDEMPKRNEFIW-TTLITGYVRNGDLTGAREILDTMTEQP----GIAWNA 259
Query: 230 LISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG 289
+ISGY+ +G E+ L LF +M GV+ +E T+ S +SAC K++H+++LKN
Sbjct: 260 MISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNE 319
Query: 290 LISNP------FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEE 343
L NP V + ++ +Y K ++ A + V++ + ++++ GY G MEE
Sbjct: 320 L--NPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEE 377
Query: 344 ARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACA 403
A+ F + EKN++ WT + SG + E L ++ + +G + + AC+
Sbjct: 378 AKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQ-MKLDGYEPNDYAFAGAITACS 436
Query: 404 LQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNV 463
+ AL G+++HA I+ +G + + ++ MY++CG + A +F D V +N
Sbjct: 437 VLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNS 496
Query: 464 MIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADY 523
MIA HGH KAI L+E+ML++GI PD TF+ +LSA H G VE G +YFNSM +Y
Sbjct: 497 MIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENY 556
Query: 524 KISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEA 583
I+P DHYA MIDL+ RA + A + S+P E A I + L CR + N +L EA
Sbjct: 557 GIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEA 616
Query: 584 EEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHI 643
EKL +L + YV L+N+YA+ G W ++ R RK MR + CSW VE+++H+
Sbjct: 617 AEKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPACSWTEVENKVHV 676
Query: 644 FTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
F V D HP+ +IY+ L E+ +I
Sbjct: 677 FLVDDTVHPEVLSIYNYLEKLNLEMKKIG 705
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/385 (19%), Positives = 158/385 (41%), Gaps = 52/385 (13%)
Query: 255 VRWNEHTFASALSACC--GLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
VR + + + L+ CC L + A+ +H V+ +G + + ++D+Y K + Y
Sbjct: 7 VRVLANRYFAQLNLCCPQNLSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVY 66
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFD--SLTEKNVVVWTALFSGYVKAQ 370
A + + + +++I YS GN++ AR F+ L ++ V + A+ +GY
Sbjct: 67 ARKLFDEIPQPDVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMN 126
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
+ + +L D +L + + ++H +++ G+++ ++
Sbjct: 127 DGHSAIELFRAMRWANFQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAVL 186
Query: 431 STLVDMYSKC----------------------------------------GNMTYAEIIF 450
+ L+ +Y KC G++T A I
Sbjct: 187 NALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREIL 246
Query: 451 QNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVE 510
E+ + +N MI+ Y HHG E A+ LF +M G++ D T+ +++SA G
Sbjct: 247 DTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFL 306
Query: 511 MGEKYFNSMTADYKISPETDHYA----CMIDLYGRANQLEKAIEFMKSIPTEEDA---VI 563
+G K ++ +++P+ D +I LY + +++ A + +P ++ +
Sbjct: 307 LG-KQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTL 365
Query: 564 LGSFLNVCRLNRNAELAGEAEEKLL 588
L ++N R+ + EK L
Sbjct: 366 LSGYVNAGRMEEAKSFFAQMPEKNL 390
>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 222/667 (33%), Positives = 348/667 (52%), Gaps = 60/667 (8%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K G T N L+ +Y+K N + ++KLFDE+P+RN +W +IS
Sbjct: 312 HALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILIS-------- 363
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
G+ A E LF EMQ+ +++T++S L
Sbjct: 364 -----------------------GFARAGSSEM-VFNLFREMQAKGAC--PNQYTLSSVL 397
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C N+ G+ +HA+M++ D +S++D+Y KC+ +E A R+FE E ++
Sbjct: 398 KCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFE-LMNEGDV 456
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+S N M+ A R G++E +L F R P D VSWNT++ G +Q G L+ M E
Sbjct: 457 VSWNIMIGAYLRAGDVEKSLDMFRRLP-YKDVVSWNTIVDGLLQCGYERHALEQLYCMVE 515
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G ++ TF+ AL L +V+ +++H VLK G S+ F+ S +V++YCKC M+
Sbjct: 516 CGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDK 575
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
A ++L+ V + +GN + + + +V W ++ SGYV
Sbjct: 576 AS--IILRDVP---------LDVLRKGNARVSYKE----PKAGIVSWGSMVSGYVWNGKY 620
Query: 373 EALFDLLSEF--VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
E D L F + +E VV D + ++ ACA L G+ +HAY+ ++G ++D +
Sbjct: 621 E---DGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVG 677
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
S+L+DMYSK G++ A ++F+ E ++V++ MI+ YA HG AI LFEEML +GI
Sbjct: 678 SSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGII 737
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
P+ VTF+ +L+A H G +E G +YF M Y I+P +H M+DLYGRA L K
Sbjct: 738 PNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTKTKN 797
Query: 551 FMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGN 610
F+ + SFL+ CRL++N E+ E LL++ ++ YV L+N+ A+
Sbjct: 798 FIFKNGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHR 857
Query: 611 WAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
W E R+R M RG+K + G SW+ ++ +IH F +GD SHP+ + IYS L I G L
Sbjct: 858 WDEAARVRSLMHQRGVK--KQPGQSWIQLKDQIHTFVMGDRSHPQDDEIYSYLDILIGRL 915
Query: 669 YEIAGAF 675
EI +F
Sbjct: 916 KEIGYSF 922
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 130/510 (25%), Positives = 241/510 (47%), Gaps = 67/510 (13%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
NL+ H ++ G+ + + N ++ +Y K + + +LF+ M E +V SWN +I
Sbjct: 405 NLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIG 464
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADAL-KLFIEMQSADEHIRM 123
A +++ D++++ +F P+KD+V++N+++ G + GYE AL +L+ ++ E
Sbjct: 465 AYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQC-GYERHALEQLYCMVECGTE---F 520
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
T + L L L +V GRQLH ++K D+ GF SSL++MY KC ++A +
Sbjct: 521 SAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKASIIL 580
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
+V L NA V+ +++P+ VSW +++SGYV NG E+G
Sbjct: 581 RDVPLDV-LRKGNARVS---------------YKEPKAG-IVSWGSMVSGYVWNGKYEDG 623
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
LK F M V + T + +SAC ++ + +H++V K G + +V S ++D+
Sbjct: 624 LKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDM 683
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y K G++++A F E N+V+WT++
Sbjct: 684 YSK-------------------------------SGSLDDAWMVFRQSNEPNIVMWTSMI 712
Query: 364 SGY-VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI-----HAY 417
SGY + Q A+ L E + +G++ + + + +L AC+ + G AY
Sbjct: 713 SGYALHGQGMHAIG--LFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAY 770
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAE-IIFQNFIERDLVLYNVMIACYAHHGHEEK 476
+ GV+ +++VD+Y + G++T + IF+N I ++ ++ H + E
Sbjct: 771 CINPGVEH----CTSMVDLYGRAGHLTKTKNFIFKNGISHLTSVWKSFLSSCRLHKNVEM 826
Query: 477 AILLFEEMLEKGIK-PDAVTFVAILSAFRH 505
+ E +L+ P A ++ + A H
Sbjct: 827 GKWVSEMLLQVAPSDPGAYVLLSNMCASNH 856
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 134/309 (43%), Gaps = 64/309 (20%)
Query: 281 IHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGN 340
+H+ +KNG + ++ ++ +Y K NM +A+ +
Sbjct: 311 LHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKL------------------------ 346
Query: 341 MEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLG 400
FD + ++N WT L SG+ +A + E +F+L E K G + L +L
Sbjct: 347 -------FDEIPQRNTQTWTILISGFARAGSSEMVFNLFREMQAK-GACPNQYTLSSVLK 398
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL 460
C+L L GK +HA++LR G+ +D L ++++D+Y KC YAE +F+ E D+V
Sbjct: 399 CCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMNEGDVVS 458
Query: 461 YNVMIACYAHHGHEEKAILLFEE-------------------------------MLEKGI 489
+N+MI Y G EK++ +F M+E G
Sbjct: 459 WNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQLYCMVECGT 518
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
+ AVTF L VE+G + + M + + + ++++Y + +++KA
Sbjct: 519 EFSAVTFSIALILASSLSHVELGRQ-LHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKAS 577
Query: 550 EFMKSIPTE 558
++ +P +
Sbjct: 578 IILRDVPLD 586
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 71/185 (38%), Gaps = 40/185 (21%)
Query: 410 PGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYA 469
P +HA ++ G + L+ +Y+K NM +A+ +F +R+ + ++I+ +A
Sbjct: 307 PLGTLHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFA 366
Query: 470 HHGHEEKAILLFEE-----------------------------------MLEKGIKPDAV 494
G E LF E ML GI D V
Sbjct: 367 RAGSSEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVV 426
Query: 495 TFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKS 554
+IL + C E E+ F M +S + MI Y RA +EK+++ +
Sbjct: 427 LGNSILDLYLKCKVFEYAERLFELMNEGDVVS-----WNIMIGAYLRAGDVEKSLDMFRR 481
Query: 555 IPTEE 559
+P ++
Sbjct: 482 LPYKD 486
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 348 bits (893), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 218/676 (32%), Positives = 361/676 (53%), Gaps = 26/676 (3%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTI 62
S +L A+ H I +G N+L+ +Y K + L +R+LF+E+P + + T+
Sbjct: 28 SFSLARAV--HAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNPDAIARTTL 85
Query: 63 ISACIKSHDLKQARSLFDSSP--HKDLVTYNSMLCGYI-NAEGYEADALKLFIEMQSADE 119
I+A +L+ R +F+ +P +D V YN+M+ GY N +G+ A L+LF M+ D
Sbjct: 86 ITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSA--LELFRAMRRDD- 142
Query: 120 HIRMDEFTVTSTLNLCVKLL-NVGFGRQLHAFMVKTSND-ASGFAVSSLIDMYSK----- 172
R D+FT TS L+ V + N Q+H +VKT S +++L+ +Y K
Sbjct: 143 -FRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASEL 201
Query: 173 ---CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNT 229
C A ++F+ + L + M+ R ++ A + F E N +WN
Sbjct: 202 GISCSAMVSARKLFDEMPKRDEL-TWTTMITGYVRNDDLNGAREVFEAMVE-NLGAAWNA 259
Query: 230 LISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG 289
+ISGYV G +E L L +M G+++++ T+ + +SAC + + + K++H+++LKN
Sbjct: 260 MISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNE 319
Query: 290 LISNPF----VSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEAR 345
L N VS+ ++ +YCK ++ A + VRN + ++++ GY G MEEA+
Sbjct: 320 LNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAK 379
Query: 346 RHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQ 405
F+ + KN++ T + SG + + L + + +G L AC++
Sbjct: 380 SFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQ-MRLDGFEPCDFAFAGALTACSVL 438
Query: 406 AALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMI 465
AL G+++HA ++ +G + + + ++ MY+KCG + AE +F DLV +N MI
Sbjct: 439 GALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMI 498
Query: 466 ACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKI 525
A HGH KAI LF++ML++G+ PD +TF+ +L+A H G VE G YFNSM Y I
Sbjct: 499 AALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGI 558
Query: 526 SPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEE 585
+P DHYA M+DL+ RA A + S+P++ A + + L CR++ N +L EA E
Sbjct: 559 TPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAE 618
Query: 586 KLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFT 645
+L +L N YV L+N+YA G W E+ ++RK MR + CSW+ VE+++H+F
Sbjct: 619 QLFKLMPQNDGTYVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPACSWIEVENKVHVFM 678
Query: 646 VGDVSHPKTNAIYSVL 661
V D HP+ ++Y L
Sbjct: 679 VDDDVHPEVLSVYRYL 694
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 62/161 (38%), Gaps = 47/161 (29%)
Query: 399 LGACALQ--AALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIE- 455
L C+ Q A+ + +HA+++ G + ++ L++MY K N+ YA +F+
Sbjct: 18 LQLCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNP 77
Query: 456 --------------------------------RDLVLYNVMIACYAHHGHEEKAILLFEE 483
RD V YN MI YAH+G A+ LF
Sbjct: 78 DAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRA 137
Query: 484 MLEKGIKPDAVTFVAILSAF------------RHCGSVEMG 512
M +PD TF ++LSA HC V+ G
Sbjct: 138 MRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTG 178
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 204/638 (31%), Positives = 337/638 (52%), Gaps = 53/638 (8%)
Query: 24 TTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP 83
++++ N +I Y +++ +R LFD+MPER++FSWN +++ +++ L AR LFD P
Sbjct: 79 SSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMP 138
Query: 84 HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGF 143
KD+V++NS+L GY GY +A ++F M
Sbjct: 139 EKDVVSWNSLLSGYAQ-NGYVDEAREVFDNMP---------------------------- 169
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
+ + + + L+ Y EEAC +FE + +LIS N ++
Sbjct: 170 -------------EKNSISWNGLLAAYVHNGRIEEACLLFE-SKSDWDLISWNCLMGGFV 215
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
R+ ++ A F + P + DA+SWNT+ISGY Q G + +LF E+ R + T+
Sbjct: 216 RKKKLGDARWLFDKMP-VRDAISWNTMISGYAQGGGLSQARRLF---DESPTR-DVFTWT 270
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
+ +S + AK + + +S + +G Y + + M+ A + R
Sbjct: 271 AMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAG----YVQTKKMDIARELFESMPCR 326
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV 383
N S ++MI GY G++ +AR+ FD + +++ V W A+ +GY ++ + E ++ E +
Sbjct: 327 NISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVE-I 385
Query: 384 TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNM 443
++G + L CA AAL GK+IH ++MG + + L+ MY KCG++
Sbjct: 386 KQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSI 445
Query: 444 TYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAF 503
A F+ E+D+V +N M+A YA HG +A+ +FE M G+KPD +T V +LSA
Sbjct: 446 DEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSAC 505
Query: 504 RHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVI 563
H G ++ G +YF SMT DY + P + HY CMIDL GRA +LE+A + ++++P + A
Sbjct: 506 SHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAAS 565
Query: 564 LGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRG 623
G+ L R++ N EL +A E + ++E N YV L+N+YAA G W + ++R +MR
Sbjct: 566 WGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRD 625
Query: 624 MKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+ + G SWV V+++IH F+VGD SHP+ IY+ L
Sbjct: 626 IGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYL 663
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 120/279 (43%), Gaps = 67/279 (24%)
Query: 22 TLTTITTNQLIHIYSKHNLLRESRKLFDEMPE---------------------------- 53
T T ++ Y ++ +L E++ FDEMPE
Sbjct: 263 TRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFES 322
Query: 54 ---RNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKL 110
RN+ SWNT+I+ + D+ QAR FD P +D V++ +++ GY + YE +AL +
Sbjct: 323 MPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYE-EALNM 381
Query: 111 FIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMY 170
F+E++ E ++ T L+ C + + G+Q+H VK F ++L+ MY
Sbjct: 382 FVEIKQDGES--LNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMY 439
Query: 171 SKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTL 230
KC +EA FEG EE +++S N M+A
Sbjct: 440 FKCGSIDEANDTFEG-IEEKDVVSWNTMLA------------------------------ 468
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
GY ++G + L +F M GV+ +E T LSAC
Sbjct: 469 --GYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSAC 505
Score = 42.4 bits (98), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 75/202 (37%), Gaps = 35/202 (17%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H QA+K G N L+ +Y K + E+ F+ + E++V SWNT
Sbjct: 417 HGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNT----------- 465
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
ML GY G+ AL +F M++A ++ DE T+ L
Sbjct: 466 --------------------MLAGYAR-HGFGRQALTVFESMKTAG--VKPDEITMVGVL 502
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSN-DASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
+ C + G + M K + + +ID+ + EEA + +
Sbjct: 503 SACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPG 562
Query: 192 LISKNAMVAACCREGEMEMALK 213
S A++ A G E+ K
Sbjct: 563 AASWGALLGASRIHGNTELGEK 584
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 204/638 (31%), Positives = 337/638 (52%), Gaps = 53/638 (8%)
Query: 24 TTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP 83
++++ N +I Y +++ +R LFD+MPER++FSWN +++ +++ L AR LFD P
Sbjct: 79 SSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMP 138
Query: 84 HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGF 143
KD+V++NS+L GY GY +A ++F M
Sbjct: 139 EKDVVSWNSLLSGYAQ-NGYVDEAREVFDNMP---------------------------- 169
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
+ + + + L+ Y EEAC +FE + +LIS N ++
Sbjct: 170 -------------EKNSISWNGLLAAYVHNGRIEEACLLFE-SKSDWDLISWNCLMGGFV 215
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
R+ ++ A F + P + DA+SWNT+ISGY Q G + +LF E+ R + T+
Sbjct: 216 RKKKLGDARWLFDKMP-VRDAISWNTMISGYAQGGGLSQARRLF---DESPTR-DVFTWT 270
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
+ +S + AK + + +S + +G Y + + M+ A + R
Sbjct: 271 AMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAG----YVQTKKMDIARELFESMPCR 326
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV 383
N S ++MI GY G++ +AR+ FD + +++ V W A+ +GY ++ + E ++ E +
Sbjct: 327 NISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVE-I 385
Query: 384 TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNM 443
++G + L CA AAL GK+IH ++MG + + L+ MY KCG++
Sbjct: 386 KQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSI 445
Query: 444 TYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAF 503
A F+ E+D+V +N M+A YA HG +A+ +FE M G+KPD +T V +LSA
Sbjct: 446 DEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSAC 505
Query: 504 RHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVI 563
H G ++ G +YF SMT DY + P + HY CMIDL GRA +LE+A + ++++P + A
Sbjct: 506 SHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAAS 565
Query: 564 LGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRG 623
G+ L R++ N EL +A E + ++E N YV L+N+YAA G W + ++R +MR
Sbjct: 566 WGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRD 625
Query: 624 MKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+ + G SWV V+++IH F+VGD SHP+ IY+ L
Sbjct: 626 IGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYL 663
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 120/279 (43%), Gaps = 67/279 (24%)
Query: 22 TLTTITTNQLIHIYSKHNLLRESRKLFDEMPE---------------------------- 53
T T ++ Y ++ +L E++ FDEMPE
Sbjct: 263 TRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFES 322
Query: 54 ---RNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKL 110
RN+ SWNT+I+ + D+ QAR FD P +D V++ +++ GY + YE +AL +
Sbjct: 323 MPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYE-EALNM 381
Query: 111 FIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMY 170
F+E++ E ++ T L+ C + + G+Q+H VK F ++L+ MY
Sbjct: 382 FVEIKQDGES--LNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMY 439
Query: 171 SKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTL 230
KC +EA FEG EE +++S N M+A
Sbjct: 440 FKCGSIDEANDTFEG-IEEKDVVSWNTMLA------------------------------ 468
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
GY ++G + L +F M GV+ +E T LSAC
Sbjct: 469 --GYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSAC 505
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 38/143 (26%)
Query: 505 HCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVIL 564
+ G ++ G +YF M +Y ++P + HY CMIDL GR ++LE+
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEE----------------- 818
Query: 565 GSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGM 624
G+ L R++ N EL +A + ++ N +MR +
Sbjct: 819 GALLGASRIHGNTELGEKAAQMFFKMGPQNSG---------------------ISKMRDV 857
Query: 625 KGNRFAGCSWVYVEHEIHIFTVG 647
+ G SW V+++IH F+VG
Sbjct: 858 GVQKVPGYSWFEVQNKIHTFSVG 880
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 75/202 (37%), Gaps = 35/202 (17%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H QA+K G N L+ +Y K + E+ F+ + E++V SWNT
Sbjct: 417 HGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNT----------- 465
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
ML GY G+ AL +F M++A ++ DE T+ L
Sbjct: 466 --------------------MLAGYAR-HGFGRQALTVFESMKTAG--VKPDEITMVGVL 502
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSN-DASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
+ C + G + M K + + +ID+ + EEA + +
Sbjct: 503 SACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPG 562
Query: 192 LISKNAMVAACCREGEMEMALK 213
S A++ A G E+ K
Sbjct: 563 AASWGALLGASRIHGNTELGEK 584
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 186/614 (30%), Positives = 324/614 (52%), Gaps = 36/614 (5%)
Query: 44 SRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGY 103
+ K F + + N+++ KSH + A +F S P +D+V++N M+ ++ G
Sbjct: 213 ASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWN-MVISALSKSGR 271
Query: 104 EADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV 163
+AL + ++M + +R D T TS+L C +L ++ +G+QLH +++ +
Sbjct: 272 VREALDMVVDMHG--KGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVA 329
Query: 164 SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELND 223
S+++++Y+KC C++EA RVF + +
Sbjct: 330 SAMVELYAKCGCFKEAKRVFSSLRDR---------------------------------N 356
Query: 224 AVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHS 283
+VSW LI G++Q G E ++LF +M + ++ A+ +S CC ++ ++HS
Sbjct: 357 SVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHS 416
Query: 284 WVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEE 343
LK+G VS+ ++ +Y KC N+ AE + R+ S + MI YS GN+ +
Sbjct: 417 LCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAK 476
Query: 344 ARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACA 403
AR FD ++ +NV+ W A+ Y++ E + S+ +T++ V+ D + V L CA
Sbjct: 477 AREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCA 536
Query: 404 LQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNV 463
A G +I + +++G+ +D +++ ++ MYSKCG ++ A F +DLV +N
Sbjct: 537 DIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSWNA 596
Query: 464 MIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADY 523
MI Y+ HG ++AI +F+++L KG KPD +++VA+LS H G VE G+ YF+ M D+
Sbjct: 597 MITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEGKFYFDMMKRDH 656
Query: 524 KISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEA 583
ISP +H++CM+DL GRA L +A + +P + A + G+ L+ C+ + N +LA A
Sbjct: 657 NISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNDLAELA 716
Query: 584 EEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHI 643
+ L L+ Y+ LA +YA G + ++RK MR + G SW+ V + +H+
Sbjct: 717 AKHLFDLDSPGSGGYMLLAKMYADAGKSDDSAQVRKLMRDKGIKKSPGYSWMEVNNRVHV 776
Query: 644 FTVGDVSHPKTNAI 657
F DVSHP+ AI
Sbjct: 777 FKAEDVSHPQVIAI 790
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 145/533 (27%), Positives = 253/533 (47%), Gaps = 45/533 (8%)
Query: 1 MRSLNLKEALI----CHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLF-DEMPERN 55
+RS + AL H + I GL N L+H Y L ++R L DE+ E N
Sbjct: 32 LRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEITEPN 91
Query: 56 VFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQ 115
V + N +++ K L A LF P +D+ ++N+++ GY + G +AL +F+ M+
Sbjct: 92 VITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQS-GQFLNALDIFVSMR 150
Query: 116 SADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRC 175
+ + + FT + C L QL + K + ++L+DM +C
Sbjct: 151 QTGDSLP-NAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGA 209
Query: 176 YEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYV 235
+ A + F + +I +N+M+ + ++ AL+ F PE D VSWN +IS
Sbjct: 210 MDFASKQFSR-IKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPE-RDVVSWNMVISALS 267
Query: 236 QNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF 295
++G E L + V M GVR + T+ S+L+AC L +++ K++H V++N +P+
Sbjct: 268 KSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPY 327
Query: 296 VSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKN 355
V+S +V++Y KC G +EA+R F SL ++N
Sbjct: 328 VASAMVELYAKC-------------------------------GCFKEAKRVFSSLRDRN 356
Query: 356 VVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIH 415
V WT L G+++ +L ++ + E + D L L+ C + G ++H
Sbjct: 357 SVSWTVLIGGFLQYGCFSESVELFNQ-MRAELMAVDQFALATLISGCCNTMDICLGSQLH 415
Query: 416 AYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEE 475
+ L+ G + ++L+ MY+KCGN+ AE+IF ERD+V + MI Y+ G+
Sbjct: 416 SLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIA 475
Query: 476 KAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE 528
KA F++M + + +T+ A+L A+ G+ E G K ++ M + + P+
Sbjct: 476 KAREFFDDMSTRNV----ITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPD 524
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 8/120 (6%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L + +I H +K GL L T N +I +YSK + E+RK FD + +++ SWN +I+
Sbjct: 543 LGDQIIGHT--VKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITG 600
Query: 66 CIKSHDLKQARSLFDSSPHK----DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+ KQA +FD +K D ++Y ++L G ++ E K + +M D +I
Sbjct: 601 YSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEG--KFYFDMMKRDHNI 658
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 210/663 (31%), Positives = 351/663 (52%), Gaps = 61/663 (9%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
MR+ EAL + K ++++ N +I Y ++ +R LFDEMPER++ SWN
Sbjct: 70 MRTGRCSEAL----RVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEMPERDLVSWN 125
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
+I +++ +L +AR LF+ P +D+ ++N++L GY G DA ++F M
Sbjct: 126 VMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQ-NGCVDDARRVFDRMPE---- 180
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
ND S ++L+ Y + EEAC
Sbjct: 181 ----------------------------------KNDVS---WNALLSAYVQNSKLEEAC 203
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+F G E L+S N ++ ++ ++ A + F+ ++ D VSWNT+I+GY QNG+
Sbjct: 204 VLF-GSRENWALVSWNCLLGGFVKKKKIVEA-RQFFDSMKVRDVVSWNTIITGYAQNGEI 261
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
+E +LF + V T+ + +S R V+ A+E+ + + +S + +G
Sbjct: 262 DEARQLFDESPVHDV----FTWTAMVSGYIQNRMVEEARELFDRMPERNEVSWNAMLAG- 316
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
Y + E + A+ + + RN + ++MI GY+ G + EA+ FD + +++ V W
Sbjct: 317 ---YVQGERVEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWA 373
Query: 361 ALFSGYVKAQNCEALFDLLSEFV--TKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
A+ +GY ++ + ++ L FV +EG + L CA AL GK++H +
Sbjct: 374 AMIAGYSQSGHS---YEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRL 430
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
++ G + + + L+ MY KCG++ A +F+ +D+V +N MIA Y+ HG E+A+
Sbjct: 431 VKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEAL 490
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
FE M +G+KPD T VA+LSA H G V+ G +YF++MT DY + P + HYACM+DL
Sbjct: 491 RFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDL 550
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARY 598
GRA LE+A MK++P E DA I G+ L R++ N ELA A +K+ +E N Y
Sbjct: 551 LGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMY 610
Query: 599 VQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
V L+N+YA+ G W ++G++R +MR + G SW+ ++++ H F+VGD HP+ + I+
Sbjct: 611 VLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIF 670
Query: 659 SVL 661
+ L
Sbjct: 671 AFL 673
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 196/606 (32%), Positives = 316/606 (52%), Gaps = 70/606 (11%)
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAE-GYEADALKLFIEMQSADEHIRMDEF 126
K + A+ + S P L +YN+++ GY ++ G++A LK F + + DE
Sbjct: 329 KCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQA--LKSFQLLLKTG--LGFDEI 384
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
T++ LN C + GRQ+H VK+ + ++ ++++DMY KC+ EA +F+
Sbjct: 385 TLSGALNACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFD-- 442
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
E DAVSWN +I+ QNG+ EE L
Sbjct: 443 -------------------------------MMERRDAVSWNAIIAACEQNGNEEETLAH 471
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
F M + + ++ T+ S L AC G + + EIH+ ++K+G+ + FV + +VD+YCK
Sbjct: 472 FASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCK 531
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
C G +E+A + D +K +V W A+ SG+
Sbjct: 532 C-------------------------------GMIEKADKIHDRTEQKTMVSWNAIISGF 560
Query: 367 VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMD 426
Q E S + + GV D +L CA A + GK+IHA I++ +Q D
Sbjct: 561 SLLQQSEDAHKFFSRML-EMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQELQSD 619
Query: 427 KKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
+ STLVDMYSKCGNM ++++F+ RD V +N M+ YAHHG E+A+ LFE M
Sbjct: 620 VYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQL 679
Query: 487 KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLE 546
+KP+ TFV++L A H G V+ G YF+ M ++Y + P+++HY+CM+D+ GR+ +++
Sbjct: 680 VNVKPNHATFVSVLRACAHMGLVDKGLHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRID 739
Query: 547 KAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYA 606
+A+ ++ +P E DAVI + L+VC+++ N E+A +A LL+L+ + + V L+N+YA
Sbjct: 740 EALNLVQKMPFEADAVIWRNLLSVCKIHGNVEVAEKATRALLQLDPQDSSACVLLSNIYA 799
Query: 607 AEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTG 666
G W + +RK MR K + GCSW+ ++ E+H F VGD HP+ IY L + G
Sbjct: 800 DAGMWGNVSEMRKMMRHNKLKKEPGCSWIELKDEVHAFLVGDKGHPRDEEIYEKLGVLIG 859
Query: 667 ELYEIA 672
E+ +
Sbjct: 860 EMQSVG 865
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 156/618 (25%), Positives = 267/618 (43%), Gaps = 110/618 (17%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + I G TT +N L+ +Y K L + K+FD+M R+V S+N+IIS ++
Sbjct: 72 HARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKMYLRDVVSYNSIISGYASCGEM 131
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
AR F P +D+V++NS++ G++ G ++ +F+EM + D ++ L
Sbjct: 132 DIARKFFYEMPERDVVSWNSVISGFLQ-NGECRKSIDVFLEMGRCG--VGFDRASLAVVL 188
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C L G Q+H +VK D S+L+ MY+KC+ +++ VF E+ N
Sbjct: 189 KACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEK-NW 247
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+S +AM+A C VQN EGL+LF M
Sbjct: 248 VSWSAMIAGC--------------------------------VQNDRNVEGLELFKEMQG 275
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
GV ++ +AS +C L ++ KE+HS LK+ S+ V + +D+Y KC M
Sbjct: 276 VGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMAD 335
Query: 313 AESMLLLKGVRNSFSISSMIVGY------------------------------------S 336
A+ +L + S +++IVGY S
Sbjct: 336 AQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACAS 395
Query: 337 LQGNMEEARRH---FDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDAL 393
++G++E + H S++ N+ V A+ Y K + DL ++ V +A+
Sbjct: 396 IRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAI 455
Query: 394 ILVI------------------------------LLGACALQAALHPGKEIHAYILRMGV 423
I +L ACA + AL+ G EIH I++ G+
Sbjct: 456 IAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGM 515
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
D + + LVDMY KCG + A+ I ++ +V +N +I+ ++ E A F
Sbjct: 516 GFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSR 575
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC--MIDLYGR 541
MLE G+ PD T+ A+L + +V +G++ + K ++D Y C ++D+Y +
Sbjct: 576 MLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQII---KQELQSDVYICSTLVDMYSK 632
Query: 542 ANQLEKAIEFMKSIPTEE 559
++ + + P +
Sbjct: 633 CGNMQDSQLMFEKAPNRD 650
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/447 (27%), Positives = 213/447 (47%), Gaps = 42/447 (9%)
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
C K ++ G+Q HA M+ + + F + L+ MY KC + AC+VF+ +++S
Sbjct: 59 CSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKMYLR-DVVS 117
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
N++++ GEM++A K F+ PE D VSWN++ISG++QNG+ + + +F+ MG G
Sbjct: 118 YNSIISGYASCGEMDIARKFFYEMPE-RDVVSWNSVISGFLQNGECRKSIDVFLEMGRCG 176
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
V ++ + A L AC L ++H V+K G + S ++ +Y KC+ ++
Sbjct: 177 VGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLD--- 233
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK-AQNCE 373
+S S+ F L EKN V W+A+ +G V+ +N E
Sbjct: 234 ---------DSLSV-------------------FSELPEKNWVSWSAMIAGCVQNDRNVE 265
Query: 374 ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL 433
L +L E + GV I L +CA +AL GKE+H++ L+ D + +
Sbjct: 266 GL-ELFKE-MQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTAT 323
Query: 434 VDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDA 493
+DMY+KCG M A+ + + + L YN +I YA +A+ F+ +L+ G+ D
Sbjct: 324 LDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDE 383
Query: 494 VTFVAILSAFRHCGSV--EMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
+T L+A C S+ ++ + + + ++D+YG+ L +A +
Sbjct: 384 ITLSGALNA---CASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDL 440
Query: 552 MKSIPTEEDAVILGSFLNVCRLNRNAE 578
+ DAV + + C N N E
Sbjct: 441 FDMM-ERRDAVSWNAIIAACEQNGNEE 466
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 155/359 (43%), Gaps = 71/359 (19%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A+K+ N ++ +Y K L E+ LFD M R+ SWN II+AC ++
Sbjct: 406 HGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQN--- 462
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM--DEFTVTS 130
G E + L F M H RM D+FT S
Sbjct: 463 -----------------------------GNEEETLAHFASMI----HSRMEPDDFTYGS 489
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L C + G ++H ++K+ F ++L+DMY KC E+A ++ + TE+
Sbjct: 490 VLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDR-TEQK 548
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
++S WN +ISG+ +E+ K F RM
Sbjct: 549 TMVS--------------------------------WNAIISGFSLLQQSEDAHKFFSRM 576
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
E GV + T+A+ L C L V K+IH+ ++K L S+ ++ S +VD+Y KC NM
Sbjct: 577 LEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNM 636
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
++ M R+ + ++M+ GY+ G EEA + F+S+ NV A F ++A
Sbjct: 637 QDSQLMFEKAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRA 695
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 148/312 (47%), Gaps = 12/312 (3%)
Query: 261 TFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLK 320
TF+ C ++ K+ H+ ++ G FVS+ ++ +Y KC ++YA +
Sbjct: 51 TFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKM 110
Query: 321 GVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLS 380
+R+ S +S+I GY+ G M+ AR+ F + E++VV W ++ SG+++ C D+
Sbjct: 111 YLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFL 170
Query: 381 EFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC 440
E + + GV D L ++L AC G ++H +++ G D S L+ MY+KC
Sbjct: 171 E-MGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKC 229
Query: 441 GNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAIL 500
+ + +F E++ V ++ MIA + + + LF+EM G+ V+
Sbjct: 230 KRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGV---GVSQSIYA 286
Query: 501 SAFRHCG---SVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIP- 556
S FR C ++ +G K +S + +D+Y + ++ A + + S+P
Sbjct: 287 SLFRSCAALSALRLG-KELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPK 345
Query: 557 ---TEEDAVILG 565
+A+I+G
Sbjct: 346 CSLQSYNAIIVG 357
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 104/257 (40%), Gaps = 67/257 (26%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + IK+G+ + L+ +Y K ++ ++ K+ D ++ + SWN IIS
Sbjct: 507 HTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIIS-------- 558
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
SL S DA K F M + + D FT + L
Sbjct: 559 --GFSLLQQSE----------------------DAHKFFSRM--LEMGVNPDNFTYAAVL 592
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C L VG G+Q+HA ++K + + S+L+DMYSKC
Sbjct: 593 DTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKC------------------- 633
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
G M+ + F + P D V+WN ++ GY +G EE LKLF M
Sbjct: 634 -------------GNMQDSQLMFEKAPN-RDFVTWNAMLCGYAHHGLGEEALKLFESMQL 679
Query: 253 NGVRWNEHTFASALSAC 269
V+ N TF S L AC
Sbjct: 680 VNVKPNHATFVSVLRAC 696
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 83/165 (50%), Gaps = 8/165 (4%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
+ +V+ +T++ K +++ ++ +F+ +P++D VT+N+MLCGY + G +ALKLF
Sbjct: 617 QSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAH-HGLGEEALKLFE 675
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSN---DASGFAVSSLIDM 169
MQ + ++ + T S L C + V G LH F V S D S ++D+
Sbjct: 676 SMQLVN--VKPNHATFVSVLRACAHMGLVDKG--LHYFDVMLSEYGLDPQSEHYSCMVDI 731
Query: 170 YSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKT 214
+ +EA + + E + + +++ C G +E+A K
Sbjct: 732 LGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHGNVEVAEKA 776
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 207/681 (30%), Positives = 337/681 (49%), Gaps = 81/681 (11%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
NL+ H Q + G+ + ++L+ +Y + + ++R++FD+M ERNVFSW I+
Sbjct: 25 NLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIME 84
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
M CG + E + +KLF M +E +R D
Sbjct: 85 ----------------------------MYCGLGDYE----ETIKLFYLM--VNEGVRPD 110
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
F C +L N G+ ++ +M+ + + S++DM+ KC
Sbjct: 111 HFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKC----------- 159
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
G M++A + F+ + E D WN ++SGY G+ ++ L
Sbjct: 160 ---------------------GRMDIA-RRFFEEIEFKDVFMWNIMVSGYTSKGEFKKAL 197
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLK-NGLISNPFVSSGIVDV 303
+F +M GV+ N T ASA+SAC L ++ +EIH + +K L S+ V + +VD
Sbjct: 198 NVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDY 257
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSM--IVGYSLQGNMEEA-----RRH-----FDSL 351
Y KC ++ A + + S ++M + G++ G+ + A R H F L
Sbjct: 258 YAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSEL 317
Query: 352 TEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG 411
+ ++VVVW ++ S ++ DLL E + V + + +V L AC+ AAL G
Sbjct: 318 STRDVVVWNSIISACAQSGRSVNALDLLRE-MNLSNVEVNTVTMVSALPACSKLAALRQG 376
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
KEIH +I+R G+ ++++L+DMY +CG++ + IF +RDLV +NVMI+ Y H
Sbjct: 377 KEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMH 436
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH 531
G A+ LF++ G+KP+ +TF +LSA H G +E G KYF M +Y + P +
Sbjct: 437 GFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQ 496
Query: 532 YACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLE 591
YACM+DL RA Q + +EF++ +P E +A + GS L CR++ N +LA A L LE
Sbjct: 497 YACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELE 556
Query: 592 GNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSH 651
+ YV +AN+Y+A G W + +IR M+ + GCSW+ V+ ++H F VGD SH
Sbjct: 557 PQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSH 616
Query: 652 PKTNAIYSVLAIFTGELYEIA 672
P I + + ++ EI
Sbjct: 617 PLMEQISAKMESLYFDIKEIG 637
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 216/676 (31%), Positives = 361/676 (53%), Gaps = 26/676 (3%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTI 62
S +L A+ H I +G N+L+ +Y K + + +R+LF+E+P + + T+
Sbjct: 28 SFSLARAV--HAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTL 85
Query: 63 ISACIKSHDLKQARSLFDSSP--HKDLVTYNSMLCGYI-NAEGYEADALKLFIEMQSADE 119
I+A +L+ R +F+ +P +D V YN+M+ GY N +G+ A L+LF M+ D
Sbjct: 86 ITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSA--LELFRAMRRDD- 142
Query: 120 HIRMDEFTVTSTLNLCVKLL-NVGFGRQLHAFMVKTSND-ASGFAVSSLIDMYSK----- 172
R D+FT TS L+ V + N Q+H +VKT S +++L+ +Y K
Sbjct: 143 -FRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASEL 201
Query: 173 ---CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNT 229
C A ++F+ + L + M+ R ++ A + F E N +WN
Sbjct: 202 GIPCSAMVSARKLFDEMPKRDEL-TWTTMITGYVRNDDLNGAREVFEAMVE-NLGAAWNA 259
Query: 230 LISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG 289
+ISGYV G +E L L +M G+++++ T+ + +SAC + + + K++H+++LKN
Sbjct: 260 MISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNE 319
Query: 290 LISNPF----VSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEAR 345
L N VS+ ++ +YCK ++ A + VRN + ++++ GY G MEEA+
Sbjct: 320 LNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAK 379
Query: 346 RHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQ 405
F+ + KN++ T + SG + + L + + +G L AC++
Sbjct: 380 SFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQ-MRLDGFEPCDFAFAGALTACSVL 438
Query: 406 AALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMI 465
AL G+++HA ++ +G + + + ++ MY+KCG + AE +F DLV +N MI
Sbjct: 439 GALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMI 498
Query: 466 ACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKI 525
A HGH KAI LF++ML++G+ PD +TF+ +L+A H G VE G YFNSM Y I
Sbjct: 499 AALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGI 558
Query: 526 SPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEE 585
+P DHYA M+DL+ RA A + S+P++ A + + L CR++ N +L EA E
Sbjct: 559 TPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAE 618
Query: 586 KLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFT 645
+L +L N YV L+N+YA G W ++ ++RK MR + CSW+ VE+++H+F
Sbjct: 619 QLFKLMPQNDGTYVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACSWIEVENKVHVFM 678
Query: 646 VGDVSHPKTNAIYSVL 661
V D HP+ ++Y L
Sbjct: 679 VDDDVHPEVLSVYRYL 694
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 62/161 (38%), Gaps = 47/161 (29%)
Query: 399 LGACALQ--AALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIE- 455
L C+ Q A+ + +HA+++ G + ++ L++MY K N+ YA +F+
Sbjct: 18 LQLCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNP 77
Query: 456 --------------------------------RDLVLYNVMIACYAHHGHEEKAILLFEE 483
RD V YN MI YAH+G A+ LF
Sbjct: 78 DAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRA 137
Query: 484 MLEKGIKPDAVTFVAILSAF------------RHCGSVEMG 512
M +PD TF ++LSA HC V+ G
Sbjct: 138 MRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTG 178
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 203/639 (31%), Positives = 335/639 (52%), Gaps = 55/639 (8%)
Query: 24 TTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP 83
++++ N +I Y ++ +R LFD+MPER++FSWN +++ +++ L +A LFD P
Sbjct: 76 SSVSYNAMISGYLRNAKFSLARDLFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMP 135
Query: 84 HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGF 143
KD+V++N+ML GY G+ +A ++F +M +
Sbjct: 136 KKDVVSWNAMLSGYAQ-NGFVDEAREVFNKMPHRNS------------------------ 170
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
+ + L+ Y +EA R+FE LIS N ++
Sbjct: 171 -----------------ISWNGLLAAYVHNGRLKEARRLFE-SQSNWELISWNCLMGGYV 212
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
+ + A + F R P + D +SWNT+ISGY Q GD + +LF E+ +R + T+
Sbjct: 213 KRNMLGDARQLFDRMP-VRDVISWNTMISGYAQVGDLSQAKRLF---NESPIR-DVFTWT 267
Query: 264 SALSACCGLRNVKCAKE-IHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGV 322
+ +S V A++ +KN + N ++ Y + + M A +
Sbjct: 268 AMVSGYVQNGMVDEARKYFDEMPVKNEISYNAMLAG-----YVQYKKMVIAGELFEAMPC 322
Query: 323 RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF 382
RN S ++MI GY G + +AR+ FD + +++ V W A+ SGY + + E ++ E
Sbjct: 323 RNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVE- 381
Query: 383 VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGN 442
+ ++G ++ L CA AAL GK++H +++ G + + + L+ MY KCG+
Sbjct: 382 MKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGS 441
Query: 443 MTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
A +F+ E+D+V +N MIA YA HG +A++LFE M + G+KPD +T V +LSA
Sbjct: 442 TDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSA 501
Query: 503 FRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAV 562
H G ++ G +YF SM DY + P + HY CMIDL GRA +LE+A M+++P + A
Sbjct: 502 CSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAA 561
Query: 563 ILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMR 622
G+ L R++ N EL +A E + ++E N YV L+N+YAA G W ++G++R +MR
Sbjct: 562 SWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMR 621
Query: 623 GMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+ G SWV V+++IH F+VGD HP+ + IY+ L
Sbjct: 622 EAGVQKVTGYSWVEVQNKIHTFSVGDCFHPEKDRIYAFL 660
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/213 (18%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 351 LTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGA-CALQAALH 409
+ ++V W S +++ +C++ + + + V +A+I L A +L L
Sbjct: 41 FKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLF 100
Query: 410 ---PGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIA 466
P +++ ++ + ++ Y + + A +F ++D+V +N M++
Sbjct: 101 DKMPERDLFSW-------------NVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLS 147
Query: 467 CYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKIS 526
YA +G ++A +F +M + +++++ +L+A+ H G ++ + F S + IS
Sbjct: 148 GYAQNGFVDEAREVFNKMPHR----NSISWNGLLAAYVHNGRLKEARRLFESQSNWELIS 203
Query: 527 PETDHYACMIDLYGRANQLEKAIEFMKSIPTEE 559
+ C++ Y + N L A + +P +
Sbjct: 204 -----WNCLMGGYVKRNMLGDARQLFDRMPVRD 231
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H Q +KAG N L+ +Y K E+ +F+ + E++V SWNT+I+ +
Sbjct: 414 HGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFG 473
Query: 73 KQARSLFDS 81
+QA LF+S
Sbjct: 474 RQALVLFES 482
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 344 bits (883), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 193/602 (32%), Positives = 322/602 (53%), Gaps = 70/602 (11%)
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGYI-NAEGYEADALKLFIEMQSADEHIRMDEF 126
K L A+ +F+S P L YN+++ G + N +G+EA L+ F + + + +E
Sbjct: 324 KCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEA--LQFFQLLLKSG--LGFNEI 379
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
+++ + C + GRQLH+ VK++ ++ +S++DMY KC EAC +F+
Sbjct: 380 SLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFD-- 437
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
EME DAVSWN +I+ + QNG+ EE L L
Sbjct: 438 --------------------EMER-----------RDAVSWNAVIAAHEQNGNEEETLNL 466
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
F M + ++ T+ S L AC + + EIH+ ++K+GL + FV ++D+YCK
Sbjct: 467 FASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCK 526
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
C G +EEA++ D + ++ +V W A+ +G+
Sbjct: 527 C-------------------------------GMIEEAKKIHDRIEQQTMVSWNAIIAGF 555
Query: 367 VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMD 426
++ E E + K V D I+L ACA A++ GK+IH I+++ + D
Sbjct: 556 TLLKHSEDAHSFFYEML-KMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSD 614
Query: 427 KKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
+ STLVDMYSKCGNM + ++F+ +D V +N MI YA HG E+A+ FE M
Sbjct: 615 VYITSTLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQL 674
Query: 487 KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLE 546
+ ++P+ TFV+IL A H G ++ G YFN+M +Y + P+ +HY+CMID+ GR+ ++
Sbjct: 675 ENVRPNHATFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRIS 734
Query: 547 KAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYA 606
+A++ ++ +P E DAVI + L++C+++ N E+A +A +L+LE + + + L+N+YA
Sbjct: 735 EALKLIQEMPFEADAVIWRTLLSICKIHGNIEIAEKATNAILQLEPEDSSACILLSNIYA 794
Query: 607 AEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTG 666
G W ++ +RK MR K + GCSW+ V+ E+H F VG+ +HP+ IY +L++
Sbjct: 795 DAGMWGKVSEMRKMMRYNKLKKEPGCSWIEVKDEVHAFLVGNKTHPRYEEIYKILSVLLD 854
Query: 667 EL 668
E+
Sbjct: 855 EM 856
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 150/629 (23%), Positives = 285/629 (45%), Gaps = 115/629 (18%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+LK H + I +G +N L+ +Y + + L + K+F++M +R+V S+NT+IS
Sbjct: 58 SLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMIS 117
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
+ ++ A F +P +D+V++NSML G++ G ++ +F++M ++E + D
Sbjct: 118 GYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQ-NGECRKSIDVFLDMGRSEE-VGFD 175
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
+ T L C L + G G Q+H +V+ S+L+DMY+KC+ +++ ++F
Sbjct: 176 QTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFS 235
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
E+ +K + V W+ +I+G VQN + GL
Sbjct: 236 ------------------------EIPVKNW---------VCWSAIIAGCVQNDEHILGL 262
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
+LF M + G+ ++ +AS +C GL +K ++H+ LK S+ V + +D+Y
Sbjct: 263 ELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMY 322
Query: 305 CKCENMNYAESM--------------LLLKGVRNSFSISSMI---------VGY------ 335
KC ++ A+ + +++ VRN ++ +G+
Sbjct: 323 AKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLS 382
Query: 336 -------SLQGNMEEARRH---FDSLTEKNVVVWTALFSGYVKAQNCEALFD---LLSEF 382
S++G+++ + H S N+ V ++ Y K CEAL + + E
Sbjct: 383 GAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGK---CEALSEACCMFDEM 439
Query: 383 VTKEGVVTDALILV------------------------------ILLGACALQAALHPGK 412
++ V +A+I +L AC+ Q AL+ G
Sbjct: 440 ERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGM 499
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
EIH I++ G+ +D + L+DMY KCG + A+ I ++ +V +N +IA +
Sbjct: 500 EIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLK 559
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
H E A F EML+ +KPD T+ +L A + SV +G++ + K+ +D Y
Sbjct: 560 HSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQII---KLELHSDVY 616
Query: 533 --ACMIDLYGRANQLEKAIEFMKSIPTEE 559
+ ++D+Y + ++ + + P ++
Sbjct: 617 ITSTLVDMYSKCGNMQDSALVFEKAPNKD 645
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 152/317 (47%), Gaps = 13/317 (4%)
Query: 261 TFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLK 320
TF+ + C ++K K+ H+ ++ +G I + ++S+ ++ +Y +C ++NYA +
Sbjct: 45 TFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKM 104
Query: 321 GVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLS 380
R+ S ++MI GY+ G M A F +++VV W ++ SG+++ C D+
Sbjct: 105 SQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFL 164
Query: 381 EFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC 440
+ E V D ++L AC++ G ++H I+RMG D S L+DMY+KC
Sbjct: 165 DMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKC 224
Query: 441 GNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAIL 500
+ + IF ++ V ++ +IA + + LF+EM + GI V+
Sbjct: 225 KRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGI---GVSQSIYA 281
Query: 501 SAFRHCG---SVEMGEK-YFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIP 556
S FR C ++++G + + +++ D+ + +D+Y + L A S+P
Sbjct: 282 SVFRSCAGLSALKVGTQLHAHALKCDF--GSDITVGTATLDMYAKCGSLADAQRIFNSLP 339
Query: 557 TEE----DAVILGSFLN 569
+A+I+G N
Sbjct: 340 KHSLQCYNAIIVGCVRN 356
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 213/663 (32%), Positives = 349/663 (52%), Gaps = 61/663 (9%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
MR+ EAL + K ++++ N +I Y ++ +RKLFDEMPER++ SWN
Sbjct: 75 MRTGRCNEAL----RVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWN 130
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
+I +++ +L +AR LF+ P +D+ ++N+ML GY
Sbjct: 131 VMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQ--------------------- 169
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
N CV F R + ND S ++L+ Y + EEAC
Sbjct: 170 ------------NGCVDDARSVFDR------MPEKNDVS---WNALLSAYVQNSKMEEAC 208
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+F+ E L+S N ++ ++ ++ A + F+ + D VSWNT+I+GY Q+G
Sbjct: 209 MLFKS-RENWALVSWNCLLGGFVKKKKIVEA-RQFFDSMNVRDVVSWNTIITGYAQSGKI 266
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
+E +LF E+ V+ + T+ + +S R V+ A+E+ + + +S + +G
Sbjct: 267 DEARQLF---DESPVQ-DVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAG- 321
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
Y + E M A+ + + RN + ++MI GY+ G + EA+ FD + +++ V W
Sbjct: 322 ---YVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWA 378
Query: 361 ALFSGYVKAQNCEALFDLLSEFVT--KEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
A+ +GY ++ + F+ L FV +EG + L CA AL GK++H +
Sbjct: 379 AMIAGYSQSGHS---FEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRL 435
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
++ G + + + L+ MY KCG++ A +F+ +D+V +N MIA Y+ HG E A+
Sbjct: 436 VKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVAL 495
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
FE M +G+KPD T VA+LSA H G V+ G +YF +MT DY + P + HYACM+DL
Sbjct: 496 RFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDL 555
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARY 598
GRA LE A MK++P E DA I G+ L R++ N ELA A +K+ +E N Y
Sbjct: 556 LGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMY 615
Query: 599 VQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
V L+N+YA+ G W ++G++R +MR + G SW+ ++++ H F+VGD HP+ + I+
Sbjct: 616 VLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIF 675
Query: 659 SVL 661
+ L
Sbjct: 676 AFL 678
>gi|147833409|emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
Length = 1796
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 209/647 (32%), Positives = 347/647 (53%), Gaps = 39/647 (6%)
Query: 13 HVQAIKAGLTLTTITT-NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHD 71
H+ +K+G+ + ++ N+L+ +YS+ N +RE+++LF+EMP+RN FSWNT+I +KS
Sbjct: 29 HILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQLFEEMPKRNCFSWNTMIEGYLKSGS 88
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSAD------------- 118
++ LFDS PHKD ++N ++ G+ EG A +LF EM +
Sbjct: 89 KGKSLELFDSMPHKDAFSWNVVISGFAK-EGNLEVARRLFNEMPWKNGIAWNSMIHGYAC 147
Query: 119 -------------------EHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDAS 159
E D F + + + C L + G+Q+HA +V +
Sbjct: 148 NGRPKEAVGLFKDLSLNPLERFCGDTFVLATVVGACTNLGALDCGKQIHARIVVDEVEFD 207
Query: 160 GFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQP 219
SSL+++Y KC + A V +E + S +A+++ G M A + F +
Sbjct: 208 SVLGSSLVNLYGKCGDIDSANHVLN-LMKEPDAFSLSALISGYASCGRMNDARRIFCLKS 266
Query: 220 ELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAK 279
V WN++ISGYV N +A E L+LF M GV+ + TFAS LSAC L +
Sbjct: 267 NXC-VVLWNSMISGYVANNEALEALELFNNMRRKGVQEDYSTFASVLSACSTLGIIDQGI 325
Query: 280 EIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQG 339
++H+ V K G ++ + S +VD+Y KC + A + ++ ++SMI YS G
Sbjct: 326 QVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQAYDTILLNSMITVYSNCG 385
Query: 340 NMEEARRHFDSLTEKNVVVWTALFSGYVK-AQNCEALFDLLSEFVTKEGVVTDALILVIL 398
+++AR+ FD++ K+++ W ++ G+ + A EAL DL E + K G+ D L +
Sbjct: 386 RIDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEAL-DLFCE-MNKLGLRMDKFSLAGV 443
Query: 399 LGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDL 458
+ ACA ++L G++I A +G++ D+ + ++LVD Y KCG + + +F ++ D
Sbjct: 444 ISACASISSLELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRMMKSDE 503
Query: 459 VLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNS 518
V +N M+ YA +GH +A+ +F++M G++P +TFV +LSA HCG VE G K+F +
Sbjct: 504 VPWNSMLMGYATNGHGIEALNVFDQMRSVGVQPTDITFVGVLSACDHCGLVEEGRKWFYA 563
Query: 519 MTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAE 578
M DY I+P +HY+CM+DLY RA LE A+ ++ +P + D + S L C + N
Sbjct: 564 MKLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQMPLKADTSMWSSVLRGCVAHGNNI 623
Query: 579 LAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMK 625
L + ++++ L+ N YVQL+ +YA +W ++RK M K
Sbjct: 624 LGKKVAKRIIDLDPENSGAYVQLSGIYATFEDWGRSAQVRKLMYDKK 670
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 176/656 (26%), Positives = 316/656 (48%), Gaps = 78/656 (11%)
Query: 17 IKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQAR 76
IK G T N+ + +YS+ +S ++F+++ ++N+ SWN + A ++ +L++AR
Sbjct: 737 IKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFEDIIDKNLISWNIFLKAFVRFGELERAR 796
Query: 77 SLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCV 136
+FD P +D+V++N+M+ GY++ G DA + F EMQ A IR FT ++ L+
Sbjct: 797 DVFDEMPKRDVVSWNTMISGYVSF-GLFDDAFRFFSEMQKAG--IRPSGFTYSTLLSFVS 853
Query: 137 KLLNVGFGRQLHAFMVKTSNDASGFAV-SSLIDMYSKCRCYEEACRVFEGCTEEVNLISK 195
G+Q+HA M++ D S V +SLI MY K
Sbjct: 854 SACR---GKQIHASMIRNGVDLSNVVVGNSLIGMYGKF---------------------- 888
Query: 196 NAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGV 255
G ++ A F EL D +SWN+LI ++G L+ FV M G
Sbjct: 889 ----------GVVDYAFGVFITMEEL-DIISWNSLIWSCGKSGYQNLALRQFVLMRSVGY 937
Query: 256 RWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAES 315
++ T ++ ++ C L++++ ++I + ++ G +SN VSS +D++ KC +
Sbjct: 938 SPDQFTVSTVITVCSNLQDLEKGEQIFALCIRVGFLSNSIVSSASIDLFSKCNRL----- 992
Query: 316 MLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK---AQNC 372
E++ R F+ + + + V+ A+ S Y +N
Sbjct: 993 --------------------------EDSVRVFEEIYQWDSVLCNAMISSYAWHGFGENA 1026
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
LF L +E + L I+L A ++ + G +IH+ +++ G++ D + S+
Sbjct: 1027 LQLFVL----TLRENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLVVKSGLESDVIVASS 1082
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
LV+MY+K G + A F RDL+ +N MI A++G KA+ +F+E+L G PD
Sbjct: 1083 LVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPD 1142
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
+T +L A G V+ G F+SM +Y + P +HYAC++D+ R +L++A++ +
Sbjct: 1143 EITLAGVLLACNVGGLVDEGLSIFSSMEKEYGVIPAIEHYACIVDMMSRGGKLKEAMDIV 1202
Query: 553 KSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWA 612
+ +P E +I GS L C + + E+++ LE + Y+ LA Y G W
Sbjct: 1203 ELMPHEPSGLIWGSLLCACEIYGDLRFTERVAERVMELEPQSSLPYLVLAQAYEMRGRWE 1262
Query: 613 EMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
+ R+ + M+ + GCSW+ +++ + +F + H IY +L + E+
Sbjct: 1263 SLVRVXRAMKEKGVRKVIGCSWIGIKNHVFVFKENQLLHIGGKDIYFILRLLIQEI 1318
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 139/518 (26%), Positives = 236/518 (45%), Gaps = 80/518 (15%)
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS-LIDMYSKCRCYEEA 179
+ +D ++ L C ++ GR LH +K+ S ++ + L+ MYS+C EA
Sbjct: 2 VDLDLHSLARQLGSCNNYGSIYRGRXLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREA 61
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
++FE + N S N M+ + G +L+ F P DA SWN +ISG+ + G+
Sbjct: 62 QQLFEEMPKR-NCFSWNTMIEGYLKSGSKGKSLELFDSMPH-KDAFSWNVVISGFAKEGN 119
Query: 240 AEEGLKLFVRMG-ENGVRWNE-------------------------------HTF--ASA 265
E +LF M +NG+ WN TF A+
Sbjct: 120 LEVARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLATV 179
Query: 266 LSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNS 325
+ AC L + C K+IH+ ++ + + + + S +V++Y KC +++ A +L L ++
Sbjct: 180 VGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDA 239
Query: 326 FSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDL-LSEFVT 384
FS+S++I GY+ G M +ARR F + VV+W ++ SGYV N EAL L L +
Sbjct: 240 FSLSALISGYASCGRMNDARRIFCLKSNXCVVLWNSMISGYVA--NNEALEALELFNNMR 297
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK----- 439
++GV D +L AC+ + G ++HA++ ++G D + S LVDMYSK
Sbjct: 298 RKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPD 357
Query: 440 --------------------------CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH 473
CG + A IF + L+ +N MI ++ +
Sbjct: 358 DACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNAC 417
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY- 532
+A+ LF EM + G++ D + ++SA S+E+GE+ F T I E D
Sbjct: 418 PIEALDLFCEMNKLGLRMDKFSLAGVISACASISSLELGEQIFARATI---IGLEFDQII 474
Query: 533 -ACMIDLYGRANQLEKAIEF----MKSIPTEEDAVILG 565
++D Y + +E + MKS +++++G
Sbjct: 475 STSLVDFYCKCGLVEHGRKLFDRMMKSDEVPWNSMLMG 512
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 134/592 (22%), Positives = 242/592 (40%), Gaps = 112/592 (18%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
+ + + H K G T I + L+ +YSK ++ KLF ++ + N++I+
Sbjct: 321 IDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQAYDTILLNSMITV 380
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
+ AR +FD+ P K L+++NSM+ G+ + +AL LF EM +RMD+
Sbjct: 381 YSNCGRIDDARQIFDTMPSKSLISWNSMIVGF-SQNACPIEALDLFCEMNKLG--LRMDK 437
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
F++ ++ C + ++ G Q+ A + +SL+D Y KC E ++F+
Sbjct: 438 FSLAGVISACASISSLELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDR 497
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
+ +D V WN+++ GY NG E L
Sbjct: 498 MMK---------------------------------SDEVPWNSMLMGYATNGHGIEALN 524
Query: 246 LFVRMGENGVRWNEHTFASALSAC--CGLRNVKCAKEIHSW--VLKNGLISNPFVS--SG 299
+F +M GV+ + TF LSAC CGL +E W +K NP + S
Sbjct: 525 VFDQMRSVGVQPTDITFVGVLSACDHCGL-----VEEGRKWFYAMKLDYHINPGIEHYSC 579
Query: 300 IVDVYCKC----ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGN----MEEARRHFDSL 351
+VD+Y + + MN E M L ++ SS++ G GN + A+R D
Sbjct: 580 MVDLYARAGLLEDAMNLIEQMPLKA---DTSMWSSVLRGCVAHGNNILGKKVAKRIIDLD 636
Query: 352 TEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALIL----VILLGACALQAA 407
E + YV+ A F+ ++ D I + G +
Sbjct: 637 PENS--------GAYVQLSGIYATFEDWGRSAQVRKLMYDKKIPKDTSFDIAGEEGXEGL 688
Query: 408 LHPGKEI------HAYILRMGV-------QMDKKLIS---TLV--DMYSKCGNMT----- 444
KE+ +LR+ + D+K ++ TL+ DM K G T
Sbjct: 689 SSETKEVTKMKQRQNLVLRLVAEKKRECDERDQKFMAARRTLLEFDMLIKVGFNTHTFLG 748
Query: 445 ------YAEI--------IFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
Y+++ +F++ I+++L+ +N+ + + G E+A +F+EM ++
Sbjct: 749 NRCLDLYSQLGTGNDSLRVFEDIIDKNLISWNIFLKAFVRFGELERARDVFDEMPKR--- 805
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRA 542
D V++ ++S + G + ++F+ M I P Y+ ++ A
Sbjct: 806 -DVVSWNTMISGYVSFGLFDDAFRFFSEMQK-AGIRPSGFTYSTLLSFVSSA 855
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 160/378 (42%), Gaps = 71/378 (18%)
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF-VSSGIVDVYCKCENMNYAESMLL 318
H+ A L +C ++ + +H LK+G++ + + + ++ +Y +C +M A+ +
Sbjct: 7 HSLARQLGSCNNYGSIYRGRXLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQLFE 66
Query: 319 LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDL 378
RN FS ++MI GY G+ ++ FDS+ K+ W + SG+ K N E L
Sbjct: 67 EMPKRNCFSWNTMIEGYLKSGSKGKSLELFDSMPHKDAFSWNVVISGFAKEGNLEVARRL 126
Query: 379 LSEFVTKEGVV---------------------------------TDALILVILLGACALQ 405
+E K G+ D +L ++GAC
Sbjct: 127 FNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLATVVGACTNL 186
Query: 406 AALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD-------- 457
AL GK+IHA I+ V+ D L S+LV++Y KCG++ A + E D
Sbjct: 187 GALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLSALI 246
Query: 458 -----------------------LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAV 494
+VL+N MI+ Y + +A+ LF M KG++ D
Sbjct: 247 SGYASCGRMNDARRIFCLKSNXCVVLWNSMISGYVANNEALEALELFNNMRRKGVQEDYS 306
Query: 495 TFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY--ACMIDLYGRANQLEKAIEFM 552
TF ++LSA G ++ G + + YK+ D + ++D+Y + + + A +
Sbjct: 307 TFASVLSACSTLGIIDQGIQVHAHV---YKVGFTNDIIIDSALVDMYSKCRRPDDACKLF 363
Query: 553 KSIPTEEDAVILGSFLNV 570
+ D ++L S + V
Sbjct: 364 SDLQA-YDTILLNSMITV 380
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 96/250 (38%), Gaps = 43/250 (17%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K+GL I + L+ +Y+K L+ + K F ++ R++ SWNT+I + +
Sbjct: 1065 HSLVVKSGLESDVIVASSLVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIMGLAYNGRV 1124
Query: 73 KQARSLFD----SSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
+A +F P D +T +L N G + L +F M+ E+ V
Sbjct: 1125 SKALEIFKELLIGGPPPDEITLAGVLLA-CNVGGLVDEGLSIFSSMEK--------EYGV 1175
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE 188
+ + ++DM S+ +EA + E
Sbjct: 1176 IPAIE----------------------------HYACIVDMMSRGGKLKEAMDIVELMPH 1207
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPEL--NDAVSWNTLISGYVQNGDAEEGLKL 246
E + + +++ AC G++ + R EL ++ + L Y G E +++
Sbjct: 1208 EPSGLIWGSLLCACEIYGDLRFTERVAERVMELEPQSSLPYLVLAQAYEMRGRWESLVRV 1267
Query: 247 FVRMGENGVR 256
M E GVR
Sbjct: 1268 XRAMKEKGVR 1277
>gi|224066769|ref|XP_002302206.1| predicted protein [Populus trichocarpa]
gi|222843932|gb|EEE81479.1| predicted protein [Populus trichocarpa]
Length = 681
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 202/655 (30%), Positives = 345/655 (52%), Gaps = 37/655 (5%)
Query: 13 HVQAIKAGLTLTTIT-TNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSH- 70
H+ K GL +T++ N+L+ +Y++ + ++ KLFDEMP RN FSWNT+I +KS
Sbjct: 28 HILFFKKGLIQSTLSLANRLLQMYTRCGSMTDAHKLFDEMPHRNCFSWNTMIEGYMKSGN 87
Query: 71 ------------------------------DLKQARSLFDSSPHKDLVTYNSMLCGYINA 100
+++ AR LF+ P+++ V +NSM+ Y
Sbjct: 88 KERSIRLFDMMSNKNDYSWNVVFSGFAKAGEMEIARRLFNEMPNRNGVVWNSMIHSYAR- 146
Query: 101 EGYEADALKLFIEMQ-SADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDAS 159
G +A++LF E+ + D F + + + C L + G+Q+HA ++ + +
Sbjct: 147 NGSPREAVRLFKELNLDPLDKSCCDTFVLATVIGACTDLGEIQCGKQIHARILIDNMELD 206
Query: 160 GFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQP 219
SSLI++Y KC + A V EE + S +A++ G M A + F+R+
Sbjct: 207 SVLTSSLINLYGKCGDLDSAHCVLN-TMEEPDDFSLSALITGYANHGRMNDARRAFYRKS 265
Query: 220 ELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAK 279
+ V WN+LISGYV N + E LF M + G++ + T A+ LSAC L N + K
Sbjct: 266 N-SCVVVWNSLISGYVTNNEEIEAFLLFNDMQKKGLKVDFSTLATILSACSSLCNSQHGK 324
Query: 280 EIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQG 339
++H++ K GLI + V+S +D Y KC ++N A + ++ ++SMI YS G
Sbjct: 325 QMHAYACKVGLICDNVVASAFIDAYSKCGSLNDACKLFSELKTYDTILLNSMITVYSNSG 384
Query: 340 NMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILL 399
+E+A++ F+++ K+++ W ++ G + DL + K + + L ++
Sbjct: 385 KIEDAKQIFNTMPSKSLISWNSMIVGLSQNGCPVEALDLFC-MMNKLDLRMNRFNLTSVI 443
Query: 400 GACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLV 459
ACA ++L G++I A +G+ D+ + ++LVD Y KCG + +F ++ D +
Sbjct: 444 SACASISSLELGEQIFARATVVGLDSDEVISTSLVDFYCKCGFIEIGRKLFDTMMKSDEI 503
Query: 460 LYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSM 519
+N M+ YA +GH +A+ LF EM G++P +TF +LSA HCG V+ G ++FN M
Sbjct: 504 SWNSMLMGYATNGHGLEALTLFNEMRHAGVRPTEITFTGVLSACDHCGLVKEGWRWFNIM 563
Query: 520 TADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAEL 579
DY I P +HY+CM+DL+ RA LE+A+ +K +P E DA + S L C + +L
Sbjct: 564 QYDYHIDPGIEHYSCMVDLFARAGCLEEAMNLIKRMPFEADASMWSSVLRGCMAHGEKDL 623
Query: 580 AGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSW 634
+ ++++ L+ N YVQL++++A G+W +RK M+ + ++ G SW
Sbjct: 624 GEKVAQQIIELDPENSGAYVQLSSIFATSGDWESSALVRKVMQERQVQKYPGYSW 678
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 151/358 (42%), Gaps = 67/358 (18%)
Query: 278 AKEIHSWVLKNGLISNPF-VSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYS 336
K++H K GLI + +++ ++ +Y +C +M A + RN FS ++MI GY
Sbjct: 24 GKQLHILFFKKGLIQSTLSLANRLLQMYTRCGSMTDAHKLFDEMPHRNCFSWNTMIEGYM 83
Query: 337 LQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVV------- 389
GN E + R FD ++ KN W +FSG+ KA E L +E + GVV
Sbjct: 84 KSGNKERSIRLFDMMSNKNDYSWNVVFSGFAKAGEMEIARRLFNEMPNRNGVVWNSMIHS 143
Query: 390 --------------------------TDALILVILLGACALQAALHPGKEIHAYILRMGV 423
D +L ++GAC + GK+IHA IL +
Sbjct: 144 YARNGSPREAVRLFKELNLDPLDKSCCDTFVLATVIGACTDLGEIQCGKQIHARILIDNM 203
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD-------------------------- 457
++D L S+L+++Y KCG++ A + E D
Sbjct: 204 ELDSVLTSSLINLYGKCGDLDSAHCVLNTMEEPDDFSLSALITGYANHGRMNDARRAFYR 263
Query: 458 -----LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMG 512
+V++N +I+ Y + E +A LLF +M +KG+K D T ILSA + + G
Sbjct: 264 KSNSCVVVWNSLISGYVTNNEEIEAFLLFNDMQKKGLKVDFSTLATILSACSSLCNSQHG 323
Query: 513 EKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNV 570
K ++ + + + ID Y + L A + + T D ++L S + V
Sbjct: 324 -KQMHAYACKVGLICDNVVASAFIDAYSKCGSLNDACKLFSELKT-YDTILLNSMITV 379
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 214/679 (31%), Positives = 355/679 (52%), Gaps = 28/679 (4%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H I +G N+LI IYSK + L +R LFDE+P+ ++ + T+I+A + DL
Sbjct: 36 HAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYSAAGDL 95
Query: 73 KQARSLFDSSP--HKDLVTYNSMLCGYI-NAEGYEADALKLFIEMQSADEHIRMDEFTVT 129
K +R +F +P +D V YN+M+ Y N +G+ A ++LF +MQ ++ R D +T T
Sbjct: 96 KLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAA--IELFCDMQR--DNFRPDNYTFT 151
Query: 130 STLN-LCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR---------CYEEA 179
S L L + +QLH +VK+ +++LI Y KC EA
Sbjct: 152 SVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAEA 211
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
++F+ L S ++ + +++ A K F V+WN +ISGY G
Sbjct: 212 RKLFDEMPNRDEL-SWTTIITGYVKNNDLDAA-KEFLNGTSKKLGVAWNAMISGYAHRGL 269
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF---- 295
E ++F +M + ++ +E TF S +S C + KE+H++ LK ++NP
Sbjct: 270 YLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKT--VANPAPDVA 327
Query: 296 --VSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
V++ ++ Y KC ++ A+ + R+ S + ++ GY M+EA+ F+ + E
Sbjct: 328 MPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPE 387
Query: 354 KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
KN++ W + SG + E + + D ++ +C++ +L G++
Sbjct: 388 KNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAII-SCSVLGSLKHGRQ 446
Query: 414 IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH 473
+HA ++R G + + L+ MY++CG + A +F N D + +N MIA HG
Sbjct: 447 LHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQ 506
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA 533
+AI LFEEML++GI PD ++F+ ++SA H G V+ G KYF+SM Y ++P+ +HYA
Sbjct: 507 GTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYA 566
Query: 534 CMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGN 593
+IDL RA + +A E M+S+P E A I + L CR++ N +L EA E+L L+
Sbjct: 567 RIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERLFELKPQ 626
Query: 594 NKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPK 653
+ YV L+N+YA G W +M ++RK MR + GCSW+ VE+++H F VGD +HP+
Sbjct: 627 HDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKVHSFLVGDANHPE 686
Query: 654 TNAIYSVLAIFTGELYEIA 672
IY+ L E+ +I
Sbjct: 687 VRQIYNYLEQLVLEMRKIG 705
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/421 (25%), Positives = 195/421 (46%), Gaps = 23/421 (5%)
Query: 116 SADEHIRMDEFTVTSTLNLCV--KLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKC 173
+ + IR S L +C ++ R +HA M+ + G ++ LID+YSK
Sbjct: 2 TTPDSIRTAANRYGSLLQICCLQSPISYSLARPVHAHMIASGFQPRGHILNRLIDIYSKS 61
Query: 174 RCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQP-ELNDAVSWNTLIS 232
A +F+ + +++++ ++AA G+++++ K F P + D+V +N +I+
Sbjct: 62 SKLNYARYLFDEIPQP-DIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMIT 120
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGL-RNVKCAKEIHSWVLKNGLI 291
Y N D ++LF M + R + +TF S L A + K +++H V+K+G
Sbjct: 121 AYSHNHDGHAAIELFCDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTG 180
Query: 292 SNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSF---------SISSMIVGYSLQGNME 342
V + ++ Y KC A+S L+ R F S +++I GY +++
Sbjct: 181 FVTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLD 240
Query: 343 EARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGAC 402
A+ + ++K V W A+ SGY F++ + + + + D ++ C
Sbjct: 241 AAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSK-IQLDEFTFTSVISVC 299
Query: 403 ALQAALHPGKEIHAYILRM----GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDL 458
A GKE+HAY L+ + + + L+ Y KCG + A+ IF ERDL
Sbjct: 300 ANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDL 359
Query: 459 VLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNS 518
V +N++++ Y + ++A F EM EK I ++++ ++S G E K+FN
Sbjct: 360 VSWNIILSGYVNVRCMDEAKSFFNEMPEKNI----LSWIIMISGLAQIGFAEEALKFFNR 415
Query: 519 M 519
M
Sbjct: 416 M 416
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 215/680 (31%), Positives = 358/680 (52%), Gaps = 15/680 (2%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
+R +L+ A H I G N+LI +Y K + L +R+LFDE+ E + +
Sbjct: 25 LRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDKIART 84
Query: 61 TIISACIKSHDLKQARSLFDSSP--HKDLVTYNSMLCGYI-NAEGYEADALKLFIEMQSA 117
T++S S D+ ARS+F+ +P +D V YN+M+ G+ N +GY A + LF +M+
Sbjct: 85 TMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSA--INLFCKMKH- 141
Query: 118 DEHIRMDEFTVTSTL-NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKC--- 173
E + D+FT S L L + + + Q HA +K+ ++L+ +YS+C
Sbjct: 142 -EGFKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASS 200
Query: 174 -RCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
A +VF+ E+ + S M+ + G ++ + E V++N +IS
Sbjct: 201 PSLLHSARKVFDDIPEK-DERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMIS 259
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
GYV G +E L++ RM +G+ +E T+ S + AC R ++ K++H++VL+ S
Sbjct: 260 GYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDFS 319
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
F +S +V +Y KC N A ++ ++ S ++++ GY G++ EA+ F +
Sbjct: 320 FHFDNS-LVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMK 378
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
EKN++ W + SG + E L S + +EG + +CA+ A G+
Sbjct: 379 EKNILSWMIMISGLAENGFGEEGLKLFS-CMKREGFEPCDYAFSGAIKSCAVLGAYCNGQ 437
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
+ HA ++++G + L+ MY+KCG + A+ +F+ D V +N +IA HG
Sbjct: 438 QFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHG 497
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
H +A+ ++EEML+KGI+PD +TF+ +L+A H G V+ G KYFNSM Y+I P DHY
Sbjct: 498 HGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADHY 557
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
A +IDL R+ + +A ++S+P + A I + L+ CR++ N EL A +KL L
Sbjct: 558 ARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIP 617
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
+ Y+ L+N+YAA G W E+ R+RK MR + CSW+ +E ++H F V D SHP
Sbjct: 618 EHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHP 677
Query: 653 KTNAIYSVLAIFTGELYEIA 672
+ A+Y L E+ +
Sbjct: 678 EAEAVYKYLQDLGKEMRRLG 697
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 114/420 (27%), Positives = 197/420 (46%), Gaps = 26/420 (6%)
Query: 114 MQSADEHIRMDEFTVTSTLNLCVKL--LNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYS 171
MQ + +R + L LC+ L ++ R +H ++ ++ LID+Y
Sbjct: 1 MQPNPDLVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYC 60
Query: 172 KCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQP-ELNDAVSWNTL 230
K + A ++F+ +E + I++ MV+ C G++ +A F P + D V +N +
Sbjct: 61 KSSELDYARQLFDEISEP-DKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAM 119
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSA-CCGLRNVKCAKEIHSWVLKNG 289
I+G+ N D + LF +M G + ++ T+AS L+ + + K + H+ LK+G
Sbjct: 120 ITGFSHNNDGYSAINLFCKMKHEGFKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSG 179
Query: 290 LISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSF---------SISSMIVGYSLQGN 340
VS+ +V VY +C A S LL R F S ++M+ GY G
Sbjct: 180 AGYVTSVSNALVSVYSRC-----ASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGC 234
Query: 341 MEEARRHFDSLTEK-NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILL 399
+ + + E +V + A+ SGYV + +++ V+ G+ D ++
Sbjct: 235 FDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVS-SGIELDEFTYPSVI 293
Query: 400 GACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLV 459
ACA L GK++HAY+LR ++LV +Y KCG A IF+ +DLV
Sbjct: 294 RACANARLLQLGKQVHAYVLRRE-DFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLV 352
Query: 460 LYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSM 519
+N +++ Y GH +A L+F+EM EK I ++++ ++S G E G K F+ M
Sbjct: 353 SWNALLSGYVSSGHIGEAKLIFKEMKEKNI----LSWMIMISGLAENGFGEEGLKLFSCM 408
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 217/673 (32%), Positives = 355/673 (52%), Gaps = 30/673 (4%)
Query: 9 ALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIK 68
A H I +G N+LI +Y K + L + LFDE+ + ++ + T+I+A
Sbjct: 34 ARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSS 93
Query: 69 SHDLKQARSLFDSSPH--KDLVTYNSMLCGYI-NAEGYEADALKLFIEMQSADEHIRMDE 125
+ + AR +F ++P +D V YN+M+ GY N +G+ A++LF ++ R D
Sbjct: 94 AGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGF--GAIELFRDLLR--NGFRPDN 149
Query: 126 FTVTSTLN-LCVKLLNVGFGRQLHAFMVKTSNDASGFAVS---SLIDMYSKC-------- 173
FT TS L L + + + +Q+H +VK+ SGF S +L+ ++ KC
Sbjct: 150 FTFTSVLGALALIVEDEKQCQQIHCAVVKS---GSGFVTSVLNALLSVFVKCASSPLVSS 206
Query: 174 -RCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
A ++F+ TE L S M+A R GE++ A + F V+WN +IS
Sbjct: 207 SSLMAAARKLFDEMTERDEL-SWTTMIAGYVRNGELDAA-RQFLDGMTEKLVVAWNAMIS 264
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKN---- 288
GYV +G E L++F +M G++W+E T+ S LSAC K++H+++L+
Sbjct: 265 GYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRP 324
Query: 289 GLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHF 348
L + V++ + +Y KC ++ A + V++ S ++++ GY G ++EA+ F
Sbjct: 325 SLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFF 384
Query: 349 DSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAAL 408
+ + E+N++ WT + SG + E L + + EG + ACA AAL
Sbjct: 385 EEMPERNLLTWTVMISGLAQNGFGEESLKLFNR-MKSEGFEPCDYAFAGAIIACAWLAAL 443
Query: 409 HPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACY 468
G+++HA ++R+G + L+ MY+KCG + A +F D V +N MIA
Sbjct: 444 MHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAAL 503
Query: 469 AHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE 528
HGH +A+ LFE ML++ I PD +TF+ +LS H G VE G +YF SM+ Y I P
Sbjct: 504 GQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPG 563
Query: 529 TDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLL 588
DHYA MIDL RA + +A + ++++P E I + L CR++ N +L +A E+L
Sbjct: 564 EDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLF 623
Query: 589 RLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGD 648
L + YV L+N+YA G W ++ ++RK MR + GCSW+ VE+++H+F V D
Sbjct: 624 ELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWIEVENKVHVFLVDD 683
Query: 649 VSHPKTNAIYSVL 661
+ HP+ A+Y+ L
Sbjct: 684 IVHPEVQAVYNYL 696
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 192/405 (47%), Gaps = 33/405 (8%)
Query: 139 LNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAM 198
++ R +HA M+ + G+ ++ LID+Y K A +F+ + +++++ +
Sbjct: 29 MSYSIARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDE-IRQPDIVARTTL 87
Query: 199 VAACCREGEMEMALKTFWRQP-ELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRW 257
+AA G +A + F+ P + D V +N +I+GY N D ++LF + NG R
Sbjct: 88 IAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRP 147
Query: 258 NEHTFASALSACCGL-RNVKCAKEIHSWVLKNGLISNPFVSS---GIVDVYCKCENMNYA 313
+ TF S L A + + K ++IH V+K+G + FV+S ++ V+ KC +
Sbjct: 148 DNFTFTSVLGALALIVEDEKQCQQIHCAVVKSG---SGFVTSVLNALLSVFVKCASSPLV 204
Query: 314 ESMLLLKGVRNSF---------SISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
S L+ R F S ++MI GY G ++ AR+ D +TEK VV W A+ S
Sbjct: 205 SSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMIS 264
Query: 365 GYVKAQNCEALFDLLSEFVTKE---GVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
GYV F E K G+ D +L ACA GK++HAYILR
Sbjct: 265 GYVH----HGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRT 320
Query: 422 ----GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
+ + + L +Y KCG + A +F +DLV +N +++ Y + G ++A
Sbjct: 321 EPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEA 380
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTAD 522
FEEM E+ + +T+ ++S G E K FN M ++
Sbjct: 381 KSFFEEMPERNL----LTWTVMISGLAQNGFGEESLKLFNRMKSE 421
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/386 (20%), Positives = 158/386 (40%), Gaps = 54/386 (13%)
Query: 255 VRWNEHTFASALSACC--GLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
VR + +A+ L CC + A+ +H+ ++ +G ++ + ++DVYCK ++
Sbjct: 9 VRRLANQYAAQLQQCCPHNPMSYSIARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVS 68
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHF--DSLTEKNVVVWTALFSGYVKAQ 370
A + + + +++I +S GN AR F L ++ V + A+ +GY
Sbjct: 69 AHHLFDEIRQPDIVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNN 128
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG-KEIHAYILRMGVQMDKKL 429
+ +L + + + G D +LGA AL ++IH +++ G +
Sbjct: 129 DGFGAIELFRDLL-RNGFRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSV 187
Query: 430 ISTLVDMYSKCG---------NMTYAEIIFQNFIERD----------------------- 457
++ L+ ++ KC M A +F ERD
Sbjct: 188 LNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQF 247
Query: 458 --------LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSV 509
+V +N MI+ Y HHG +A+ +F +M GI+ D T+ ++LSA + G
Sbjct: 248 LDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFF 307
Query: 510 EMGEKYFNSMTADYKISPETDHYA----CMIDLYGRANQLEKAIEFMKSIPTEEDA---V 562
G K ++ + P D + LY + ++++A + +P ++
Sbjct: 308 LHG-KQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNA 366
Query: 563 ILGSFLNVCRLNRNAELAGEAEEKLL 588
IL ++N R++ E E+ L
Sbjct: 367 ILSGYVNAGRIDEAKSFFEEMPERNL 392
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 204/662 (30%), Positives = 328/662 (49%), Gaps = 68/662 (10%)
Query: 13 HVQAIKAGLTLTTITTNQLIHI--YSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSH 70
H Q ++ GL + ++LI S L ++++FD++P N+++WNT+I A S
Sbjct: 55 HAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASS- 113
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
S+PH+ L+ + ML QS D D+FT
Sbjct: 114 ----------SNPHQSLLIFLRML-------------------HQSPD---FPDKFTFPF 141
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
+ +L + G+ H ++K + F ++SLI Y+KC
Sbjct: 142 LIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKC----------------- 184
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
GE+ + + F P D VSWN++I+ +VQ G EE L+LF M
Sbjct: 185 ---------------GELGLGYRVFVNIPR-RDVVSWNSMITAFVQGGCPEEALELFQEM 228
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
V+ N T LSAC + + + +HS++ +N + + +S+ ++D+Y KC ++
Sbjct: 229 ETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSV 288
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
A+ + ++ S ++M+VGY+ G + A+ FD++ +++ W AL S Y +
Sbjct: 289 EDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCG 348
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
+ +L E + D + LV L ACA A+ G IH YI + G++++ L
Sbjct: 349 KPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLT 408
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
++L+DMY KCG++ A ++F + +D+ +++ MIA A HGH + AI LF +M E +K
Sbjct: 409 TSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVK 468
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
P+AVTF IL A H G VE G +FN M Y + P HYACM+D+ GRA LE+A+E
Sbjct: 469 PNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVE 528
Query: 551 FMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGN 610
++ +P A + G+ L C ++ N LA +A +L+ LE N YV L+N+YA G
Sbjct: 529 LIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGK 588
Query: 611 WAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYE 670
W + +RK MR + + GCS + V+ +H F VGD SHP IY+ L L
Sbjct: 589 WDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARLET 648
Query: 671 IA 672
I
Sbjct: 649 IG 650
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 126/303 (41%), Gaps = 34/303 (11%)
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLL 319
H S + C K K+IH+ +L+ GL +PF +S ++
Sbjct: 36 HPTLSLIDQC---SETKQLKQIHAQMLRTGLFFDPFSASRLITA---------------- 76
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLL 379
S +++ A++ FD + N+ W L Y + N +
Sbjct: 77 -------------AALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIF 123
Query: 380 SEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
+ + D L+ A + L GK H ++++ + D ++++L+ Y+K
Sbjct: 124 LRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAK 183
Query: 440 CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
CG + +F N RD+V +N MI + G E+A+ LF+EM + +KP+ +T V +
Sbjct: 184 CGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGV 243
Query: 500 LSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE 559
LSA E G ++ +S +I M+D+Y + +E A +P E+
Sbjct: 244 LSACAKKSDFEFG-RWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMP-EK 301
Query: 560 DAV 562
D V
Sbjct: 302 DIV 304
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 341 bits (874), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 204/638 (31%), Positives = 335/638 (52%), Gaps = 53/638 (8%)
Query: 24 TTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP 83
+++ N +I Y ++ +R LFD+MP +++FSWN +++ ++ L+ AR LFDS P
Sbjct: 63 NSVSYNAMISGYLRNAKFSLARDLFDKMPHKDLFSWNLMLTGYARNRRLRDARMLFDSMP 122
Query: 84 HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGF 143
KD+V++N+ML GY+ + G+ +A +F M +
Sbjct: 123 EKDVVSWNAMLSGYVRS-GHVDEARDVFDRMPHKNS------------------------ 157
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
+ + L+ Y + EEA R+FE + LIS N ++
Sbjct: 158 -----------------ISWNGLLAAYVRSGRLEEARRLFES-KSDWELISCNCLMGGYV 199
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
+ + A + F + P + D +SWNT+ISGY Q+GD + +LF E+ VR + T+
Sbjct: 200 KRNMLGDARQLFDQIP-VRDLISWNTMISGYAQDGDLSQARRLFE---ESPVR-DVFTWT 254
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
+ + A + A+ + + + +S + +G Y + + M+ +
Sbjct: 255 AMVYAYVQDGMLDEARRVFDEMPQKREMSYNVMIAG----YAQYKRMDMGRELFEEMPFP 310
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV 383
N S + MI GY G++ +AR FD + +++ V W A+ +GY + E ++L E +
Sbjct: 311 NIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVE-M 369
Query: 384 TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNM 443
++G + L ACA AAL GK++H ++R G + + + LV MY KCG +
Sbjct: 370 KRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCI 429
Query: 444 TYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAF 503
A +FQ +D+V +N M+A YA HG +A+ +FE M+ G+KPD +T V +LSA
Sbjct: 430 DEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSAC 489
Query: 504 RHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVI 563
H G + G +YF+SM DY I+P + HYACMIDL GRA LE+A ++++P E DA
Sbjct: 490 SHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAAT 549
Query: 564 LGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRG 623
G+ L R++ N EL +A E + ++E +N YV L+N+YAA G W ++ ++R +MR
Sbjct: 550 WGALLGASRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASGRWVDVSKMRLKMRQ 609
Query: 624 MKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+ + G SWV V+++IH FTVGD HP+ IY+ L
Sbjct: 610 IGVQKTPGYSWVEVQNKIHTFTVGDCFHPEKGRIYAFL 647
>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
Length = 852
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 205/658 (31%), Positives = 324/658 (49%), Gaps = 99/658 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A+K GL N L+ +Y+K L + KLF MP ++ +WN +IS C+++
Sbjct: 270 HTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQN--- 326
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
G+ AL LF +MQ + IR D T+ S L
Sbjct: 327 -----------------------------GFVDQALLLFCDMQKSG--IRPDSVTLVSLL 355
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
L G++LH ++V+ F VS+L+D+Y KCR A V++
Sbjct: 356 PALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYD-------- 407
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
S A+ D V +T+ISGYV NG ++E +K+F + E
Sbjct: 408 -SSKAI------------------------DVVIGSTMISGYVLNGMSQEAVKMFRYLLE 442
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G+R N AS L AC + +K +E+HS+ LKN +V S ++D+Y KC
Sbjct: 443 QGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKC----- 497
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G ++ + F ++ K+ V W ++ S + +
Sbjct: 498 --------------------------GRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEP 531
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
E +L E EGV + + +L ACA A++ GKEIH +++ ++ D S
Sbjct: 532 EEALNLFREMCM-EGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESA 590
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
L+DMY KCGN+ +A +F++ E++ V +N +IA Y +G ++++ L M E+G K D
Sbjct: 591 LIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKAD 650
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
VTF+A++SA H G V+ G + F MT +Y+I+P +H+ACM+DLY RA +L+KA+E +
Sbjct: 651 HVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELI 710
Query: 553 KSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWA 612
+P + DA I G+ L+ CR++RN ELA A ++L +L+ +N YV ++N+ A G W
Sbjct: 711 VDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWD 770
Query: 613 EMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYE 670
+ ++R+ M+ K + G SWV V + H+F D SHP + IY L EL E
Sbjct: 771 GVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSEDIYMSLKSILLELRE 828
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 133/558 (23%), Positives = 239/558 (42%), Gaps = 114/558 (20%)
Query: 10 LICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPER----NVFSWNTIISA 65
L C +Q K+G+ ++T L+ + N + ++L + +VF + ++
Sbjct: 335 LFCDMQ--KSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDI 392
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
K ++ A+S++DSS D+V ++M+ GY+ G +A+K+F + ++ IR +
Sbjct: 393 YFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYV-LNGMSQEAVKMFRYL--LEQGIRPNA 449
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
+ S L C + + G++LH++ +K + + + S+L+DMY+KC
Sbjct: 450 VAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKC------------ 497
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
G ++++ F + D V+WN++IS + QNG+ EE L
Sbjct: 498 --------------------GRLDLSHYIF-SKISAKDEVTWNSMISSFAQNGEPEEALN 536
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
LF M GV+++ T +S LSAC L + KEIH V+K + ++ F S ++D+Y
Sbjct: 537 LFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYG 596
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
KC N+ +A R F+S+ EKN V W ++ +
Sbjct: 597 KCGNLEWAH-------------------------------RVFESMPEKNEVSWNSIIAS 625
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
Y + LL + +EG D + + L+ ACA H G+ VQ
Sbjct: 626 YGAYGLVKESVSLLRH-MQEEGFKADHVTFLALVSACA-----HAGQ----------VQE 669
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
+L + + Y M + + M+ Y+ G +KA+ L +M
Sbjct: 670 GLRLFRCMTEEYQIAPRMEH---------------FACMVDLYSRAGKLDKAMELIVDM- 713
Query: 486 EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID----LYGR 541
KPDA + A+L A R +VE+ E + +K+ P Y ++ + GR
Sbjct: 714 --PFKPDAGIWGALLHACRVHRNVELAEIASQEL---FKLDPHNSGYYVLMSNINAVAGR 768
Query: 542 ANQLEKAIEFMKSIPTEE 559
+ + K MK ++
Sbjct: 769 WDGVSKVRRLMKDTKVQK 786
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 135/584 (23%), Positives = 241/584 (41%), Gaps = 103/584 (17%)
Query: 5 NLKEALICHVQAIKAGLTLT-TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
+L L H +A+ AGL T T +L+ +Y R++ +F +P
Sbjct: 54 HLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRGA-------- 105
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
+AC + +N ++ G A Y + AL +++M +
Sbjct: 106 AACA--------------------LPWNWLIRGLTMAGDYRS-ALLFYLKMWAHPSAPLP 144
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
D T + C L + GR +H D F S+LI MY+ +A +VF
Sbjct: 145 DSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVF 204
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
+G E D V WN ++ GYV+ G
Sbjct: 205 DGMAER---------------------------------DCVLWNVMMDGYVKAGSVSSA 231
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
++LF M +G N T A LS ++ ++H+ +K GL S V++ +V +
Sbjct: 232 VELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSM 291
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y KC+ + ++ + F + ++V W +
Sbjct: 292 YAKCKCL-------------------------------DDGWKLFGLMPRDDLVTWNGMI 320
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
SG V+ + L + + K G+ D++ LV LL A + GKE+H YI+R V
Sbjct: 321 SGCVQNGFVDQALLLFCD-MQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCV 379
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
MD L+S LVD+Y KC + A+ ++ + D+V+ + MI+ Y +G ++A+ +F
Sbjct: 380 HMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRY 439
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRAN 543
+LE+GI+P+AV ++L A ++++G++ +S + ++D+Y +
Sbjct: 440 LLEQGIRPNAVAIASVLPACASMAAMKLGQE-LHSYALKNAYEGRCYVESALMDMYAKCG 498
Query: 544 QLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKL 587
+L+ + ++ S + +D V S ++ N GE EE L
Sbjct: 499 RLDLS-HYIFSKISAKDEVTWNSMISSFAQN------GEPEEAL 535
>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 843
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 205/658 (31%), Positives = 324/658 (49%), Gaps = 99/658 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A+K GL N L+ +Y+K L + KLF MP ++ +WN +IS C+++
Sbjct: 270 HTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQN--- 326
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
G+ AL LF +MQ + IR D T+ S L
Sbjct: 327 -----------------------------GFVDQALLLFCDMQKSG--IRPDSVTLVSLL 355
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
L G++LH ++V+ F VS+L+D+Y KCR A V++
Sbjct: 356 PALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYD-------- 407
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
S A+ D V +T+ISGYV NG ++E +K+F + E
Sbjct: 408 -SSKAI------------------------DVVIGSTMISGYVLNGMSQEAVKMFRYLLE 442
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G+R N AS L AC + +K +E+HS+ LKN +V S ++D+Y KC
Sbjct: 443 QGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKC----- 497
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G ++ + F ++ K+ V W ++ S + +
Sbjct: 498 --------------------------GRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEP 531
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
E +L E EGV + + +L ACA A++ GKEIH +++ ++ D S
Sbjct: 532 EEALNLFREMCM-EGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESA 590
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
L+DMY KCGN+ +A +F++ E++ V +N +IA Y +G ++++ L M E+G K D
Sbjct: 591 LIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKAD 650
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
VTF+A++SA H G V+ G + F MT +Y+I+P +H+ACM+DLY RA +L+KA+E +
Sbjct: 651 HVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELI 710
Query: 553 KSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWA 612
+P + DA I G+ L+ CR++RN ELA A ++L +L+ +N YV ++N+ A G W
Sbjct: 711 VDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWD 770
Query: 613 EMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYE 670
+ ++R+ M+ K + G SWV V + H+F D SHP + IY L EL E
Sbjct: 771 GVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSEDIYMSLKSILLELRE 828
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 133/558 (23%), Positives = 239/558 (42%), Gaps = 114/558 (20%)
Query: 10 LICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPER----NVFSWNTIISA 65
L C +Q K+G+ ++T L+ + N + ++L + +VF + ++
Sbjct: 335 LFCDMQ--KSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDI 392
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
K ++ A+S++DSS D+V ++M+ GY+ G +A+K+F + ++ IR +
Sbjct: 393 YFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYV-LNGMSQEAVKMFRYL--LEQGIRPNA 449
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
+ S L C + + G++LH++ +K + + + S+L+DMY+KC
Sbjct: 450 VAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKC------------ 497
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
G ++++ F + D V+WN++IS + QNG+ EE L
Sbjct: 498 --------------------GRLDLSHYIF-SKISAKDEVTWNSMISSFAQNGEPEEALN 536
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
LF M GV+++ T +S LSAC L + KEIH V+K + ++ F S ++D+Y
Sbjct: 537 LFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYG 596
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
KC N+ +A R F+S+ EKN V W ++ +
Sbjct: 597 KCGNLEWAH-------------------------------RVFESMPEKNEVSWNSIIAS 625
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
Y + LL + +EG D + + L+ ACA H G+ VQ
Sbjct: 626 YGAYGLVKESVSLLRH-MQEEGFKADHVTFLALVSACA-----HAGQ----------VQE 669
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
+L + + Y M + + M+ Y+ G +KA+ L +M
Sbjct: 670 GLRLFRCMTEEYQIAPRMEH---------------FACMVDLYSRAGKLDKAMELIVDM- 713
Query: 486 EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID----LYGR 541
KPDA + A+L A R +VE+ E + +K+ P Y ++ + GR
Sbjct: 714 --PFKPDAGIWGALLHACRVHRNVELAEIASQEL---FKLDPHNSGYYVLMSNINAVAGR 768
Query: 542 ANQLEKAIEFMKSIPTEE 559
+ + K MK ++
Sbjct: 769 WDGVSKVRRLMKDTKVQK 786
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 135/584 (23%), Positives = 241/584 (41%), Gaps = 103/584 (17%)
Query: 5 NLKEALICHVQAIKAGLTLT-TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
+L L H +A+ AGL T T +L+ +Y R++ +F +P
Sbjct: 54 HLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRGA-------- 105
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
+AC + +N ++ G A Y + AL +++M +
Sbjct: 106 AACA--------------------LPWNWLIRGLTMAGDYRS-ALLFYLKMWAHPSAPLP 144
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
D T + C L + GR +H D F S+LI MY+ +A +VF
Sbjct: 145 DSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVF 204
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
+G E D V WN ++ GYV+ G
Sbjct: 205 DGMAER---------------------------------DCVLWNVMMDGYVKAGSVSSA 231
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
++LF M +G N T A LS ++ ++H+ +K GL S V++ +V +
Sbjct: 232 VELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSM 291
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y KC+ + ++ + F + ++V W +
Sbjct: 292 YAKCKCL-------------------------------DDGWKLFGLMPRDDLVTWNGMI 320
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
SG V+ + L + + K G+ D++ LV LL A + GKE+H YI+R V
Sbjct: 321 SGCVQNGFVDQALLLFCD-MQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCV 379
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
MD L+S LVD+Y KC + A+ ++ + D+V+ + MI+ Y +G ++A+ +F
Sbjct: 380 HMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRY 439
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRAN 543
+LE+GI+P+AV ++L A ++++G++ +S + ++D+Y +
Sbjct: 440 LLEQGIRPNAVAIASVLPACASMAAMKLGQE-LHSYALKNAYEGRCYVESALMDMYAKCG 498
Query: 544 QLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKL 587
+L+ + ++ S + +D V S ++ N GE EE L
Sbjct: 499 RLDLS-HYIFSKISAKDEVTWNSMISSFAQN------GEPEEAL 535
>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Cucumis sativus]
Length = 720
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 212/661 (32%), Positives = 333/661 (50%), Gaps = 74/661 (11%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L+ H IK+ + +T +N + +YSK L +R++FD + NVFS+NT+IS
Sbjct: 23 DLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNVFSFNTLIS 82
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
A K ++ A LFD P D V+YN+++ Y G A +LF+EM+ A + MD
Sbjct: 83 AYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYAR-RGDTQPAFQLFLEMREA--FLDMD 139
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
FT++ + C +NVG RQLHA V T D+ ++LI YSK +EA R+F
Sbjct: 140 GFTLSGIITACG--INVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFH 197
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
+E+ D VSWN+++ Y+Q+ + + L
Sbjct: 198 WLSED--------------------------------RDEVSWNSMVVAYMQHREGSKAL 225
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
+L++ M G+ + T AS L+A ++++ + H+ ++K+G N V SG++D+Y
Sbjct: 226 ELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLY 285
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
KC G M + R+ FD ++ ++V+W + S
Sbjct: 286 SKC------------------------------GGCMLDCRKVFDEISNPDLVLWNTMIS 315
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVV---TDALILVILLGACALQAALHPGKEIHAYILRM 421
GY E L D E + VV D LV ++ AC+ ++ G+++H L++
Sbjct: 316 GYSLY---EDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKL 372
Query: 422 GVQMDKKLIS-TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
+ ++ ++ L+ MYSKCGN+ A+ +F E + V YN MIA YA HG +++ L
Sbjct: 373 DIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHL 432
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
F+ MLE G P +TF+++L+A H G VE G+ YFN M + I PE H++CMIDL G
Sbjct: 433 FQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLG 492
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQ 600
RA +L +A +++IP + + L CR++ N ELA +A +LL+L+ N A YV
Sbjct: 493 RAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPYVM 552
Query: 601 LANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSV 660
LAN+Y+ G + +RK MR + GCSW+ V IHIF D HP I
Sbjct: 553 LANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIKKIQEY 612
Query: 661 L 661
L
Sbjct: 613 L 613
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 202/428 (47%), Gaps = 39/428 (9%)
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L C+ ++ G+ LHA +K+ S + + + +YSKCR A RVF+ T + N
Sbjct: 15 LKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDH-THDCN 73
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
+ S N +++A +E +E+A + F P+ D+VS+NTLI+ Y + GD + +LF+ M
Sbjct: 74 VFSFNTLISAYAKESYVEVAHQLFDEMPQ-PDSVSYNTLIAAYARRGDTQPAFQLFLEMR 132
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
E + + T + ++A CG+ NV +++H+ + GL S +VS G
Sbjct: 133 EAFLDMDGFTLSGIITA-CGI-NVGLIRQLHALSVVTGLDS--YVSVG------------ 176
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE-KNVVVWTALFSGYVKAQ 370
+++I YS G ++EARR F L+E ++ V W ++ Y++ +
Sbjct: 177 -----------------NALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHR 219
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
+L E +T G++ D L +L A L G + HA +++ G + +
Sbjct: 220 EGSKALELYLE-MTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVG 278
Query: 431 STLVDMYSKCGN-MTYAEIIFQNFIERDLVLYNVMIACYA-HHGHEEKAILLFEEMLEKG 488
S L+D+YSKCG M +F DLVL+N MI+ Y+ + ++A+ F ++ G
Sbjct: 279 SGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQVVG 338
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
+PD + V ++SA + S G + S +I +Y + L A
Sbjct: 339 HRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDA 398
Query: 549 IEFMKSIP 556
++P
Sbjct: 399 KTLFDTMP 406
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 135/284 (47%), Gaps = 7/284 (2%)
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLL 319
H F L C R+++ K +H+ +K+ + ++ ++S+ + +Y KC ++ A +
Sbjct: 9 HNFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDH 68
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLL 379
N FS +++I Y+ + +E A + FD + + + V + L + Y + + + F L
Sbjct: 69 THDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLF 128
Query: 380 SEFVTKEGVVT-DALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYS 438
E +E + D L ++ AC + L +++HA + G+ + + L+ YS
Sbjct: 129 LEM--REAFLDMDGFTLSGIITACGINVGL--IRQLHALSVVTGLDSYVSVGNALITSYS 184
Query: 439 KCGNMTYAEIIFQNFIE-RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFV 497
K G + A IF E RD V +N M+ Y H KA+ L+ EM +G+ D T
Sbjct: 185 KNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLA 244
Query: 498 AILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGR 541
++L+AF + + +G F++ + + +IDLY +
Sbjct: 245 SVLTAFTNVQDL-LGGLQFHAKLIKSGYHQNSHVGSGLIDLYSK 287
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 189/592 (31%), Positives = 319/592 (53%), Gaps = 66/592 (11%)
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
DL+ A +FD P +++VT+ M+ + G+ DA+ LF++M + D FT++
Sbjct: 94 DLESAYKVFDRMPDRNVVTWTLMITRF-QQLGFSRDAVDLFLDMVLSG--YVPDRFTLSG 150
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
++ C ++ + GRQ H ++K+ D SL+DMY+KC
Sbjct: 151 VVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKC----------------- 193
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE-EGLKLFVR 249
+G ++ A K F R P +++ +SW +I+GYVQ+G + E ++LF+
Sbjct: 194 ------------VADGSVDDARKVFDRMP-VHNVMSWTAIITGYVQSGGCDREAIELFLE 240
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
M + V+ N TF+S L AC L ++ +++++ V+K L S V + ++ +Y +C
Sbjct: 241 MVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRC-- 298
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
GNME AR+ FD L EKN+V + + + Y K+
Sbjct: 299 -----------------------------GNMENARKAFDVLFEKNLVSYNTIVNAYAKS 329
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
N E F+L +E + G +A LL + A+ G++IH+ IL+ G + + +
Sbjct: 330 LNSEEAFELFNE-IEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHI 388
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+ L+ MYS+CGN+ A +F + +++ + MI +A HG +A+ F +MLE G+
Sbjct: 389 CNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGV 448
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
P+ VT++A+LSA H G + G K+F SM ++ I P +HYAC++DL GR+ LE+A+
Sbjct: 449 SPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAM 508
Query: 550 EFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEG 609
E + S+P + DA++L +FL CR++ N +L A E +L + ++ A Y+ L+N++A+ G
Sbjct: 509 ELVNSMPFKADALVLRTFLGACRVHGNMDLGKHAAEMILEQDPHDPAAYILLSNLHASAG 568
Query: 610 NWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
W E+ IRK+M+ + AGCSW+ VE+++H F VGD SHP+ IY L
Sbjct: 569 QWEEVAEIRKKMKERNLTKEAGCSWIEVENKVHKFYVGDTSHPQAQEIYDEL 620
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 119/470 (25%), Positives = 216/470 (45%), Gaps = 71/470 (15%)
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
+DLV++++++ Y N E +A+ F +M +E+ T C N+ G
Sbjct: 5 RDLVSWSALISCYANNEK-AFEAISAFFDMLECG--FYPNEYCFTGVFRACSNKENISLG 61
Query: 145 RQLHAFMVKTSNDASGFAVS-SLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
+ + F++KT S V +LIDM+ K
Sbjct: 62 KIIFGFLLKTGYFESDVCVGCALIDMFVK------------------------------- 90
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
G++E A K F R P+ N V+W +I+ + Q G + + + LF+ M +G + T +
Sbjct: 91 GNGDLESAYKVFDRMPDRN-VVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLS 149
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
+SAC + + ++ H V+K+GL + V +VD+Y KC
Sbjct: 150 GVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKC---------------- 193
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE-ALFDLLSEF 382
G++++AR+ FD + NV+ WTA+ +GYV++ C+ +L E
Sbjct: 194 ------------VADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEM 241
Query: 383 VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGN 442
V + V + +L ACA + + G++++A +++M + + ++L+ MYS+CGN
Sbjct: 242 VQGQ-VKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGN 300
Query: 443 MTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
M A F E++LV YN ++ YA + E+A LF E+ G +A TF ++LS
Sbjct: 301 MENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSG 360
Query: 503 FRHCGSVEMGEKYFNSMTADYKISPETDHYAC--MIDLYGRANQLEKAIE 550
G++ GE+ + + K +++ + C +I +Y R +E A +
Sbjct: 361 ASSIGAIGKGEQIHSRIL---KSGFKSNLHICNALISMYSRCGNIEAAFQ 407
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 122/486 (25%), Positives = 195/486 (40%), Gaps = 106/486 (21%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSK---HNLLRESRKLFDEMPERNVFSWNTIISACIKS 69
H +K+GL L L+ +Y+K + ++RK+FD MP NV SW II+
Sbjct: 168 HCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIIT----- 222
Query: 70 HDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVT 129
GY+ + G + +A++LF+EM ++ + FT +
Sbjct: 223 --------------------------GYVQSGGCDREAIELFLEMVQG--QVKPNHFTFS 254
Query: 130 STLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEE 189
S L C L ++ G Q++A +VK + +SLI MYS+C E A + F+
Sbjct: 255 SVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFD----- 309
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
L KN VS+NT+++ Y ++ ++EE +LF
Sbjct: 310 -VLFEKN---------------------------LVSYNTIVNAYAKSLNSEEAFELFNE 341
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
+ G N TFAS LS + + ++IHS +LK+G SN + + ++ +Y +C N
Sbjct: 342 IEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGN 401
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNV----VVWTALFSG 365
+ A + G N S +SMI G++ G A F + E V V + A+ S
Sbjct: 402 IEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSA 461
Query: 366 ------------YVKAQNCE-----------ALFDLLS---------EFVTKEGVVTDAL 393
+ K+ E + DLL E V DAL
Sbjct: 462 CSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADAL 521
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF 453
+L LGAC + + GK IL D L ++++ G I +
Sbjct: 522 VLRTFLGACRVHGNMDLGKHAAEMILEQDPH-DPAAYILLSNLHASAGQWEEVAEIRKKM 580
Query: 454 IERDLV 459
ER+L
Sbjct: 581 KERNLT 586
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Query: 455 ERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
+RDLV ++ +I+CYA++ +AI F +MLE G P+ F + A + ++ +G+
Sbjct: 4 KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63
Query: 515 YFNSMTADYKISPETDHYACMIDLYGRAN-QLEKAIEFMKSIP 556
F + + +ID++ + N LE A + +P
Sbjct: 64 IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMP 106
>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49710-like [Cucumis sativus]
Length = 720
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 211/665 (31%), Positives = 336/665 (50%), Gaps = 82/665 (12%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L+ H IK+ + +T +N + +YSK L +R++FD + NVFS+NT+IS
Sbjct: 23 DLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNVFSFNTLIS 82
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
A K ++ A LFD P D V+YN+++ Y G A +LF+EM+ A + MD
Sbjct: 83 AYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYAR-RGDTQPAFQLFLEMREA--FLDMD 139
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
FT++ + C +NVG RQLHA V T D+ ++LI YSK +EA R+F
Sbjct: 140 GFTLSGIITACG--INVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFH 197
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
+E+ D VSWN+++ Y+Q+ + + L
Sbjct: 198 WLSED--------------------------------RDEVSWNSMVVAYMQHREGSKAL 225
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
+L++ M G+ + T AS L+A ++++ + H+ ++K+G N V SG++D+Y
Sbjct: 226 ELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLY 285
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
KC G M + R+ FD ++ ++V+W + S
Sbjct: 286 SKC------------------------------GGCMLDCRKVFDEISNPDLVLWNTMIS 315
Query: 365 GYVKAQNCEALFDLLSE-----FVTKEGV--VTDALILVILLGACALQAALHPGKEIHAY 417
GY +L++ LS+ F +GV D LV ++ AC+ ++ G+++H
Sbjct: 316 GY-------SLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGL 368
Query: 418 ILRMGVQMDKKLIS-TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
L++ + ++ ++ L+ MYSKCGN+ A+ +F E + V YN MIA YA HG +
Sbjct: 369 ALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQ 428
Query: 477 AILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMI 536
++ LF+ MLE P +TF+++L+A H G VE G+ YFN M + I PE H++CMI
Sbjct: 429 SLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMI 488
Query: 537 DLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKA 596
DL GRA +L +A +++IP + + L CR++ N ELA +A +LL+L+ N A
Sbjct: 489 DLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQLDPLNAA 548
Query: 597 RYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNA 656
YV LAN+Y+ G + +RK MR + GCSW+ V IHIF D HP
Sbjct: 549 PYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIKK 608
Query: 657 IYSVL 661
I L
Sbjct: 609 IQEYL 613
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 202/428 (47%), Gaps = 39/428 (9%)
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L C+ ++ G+ LHA +K+ S + + + +YSKCR A RVF+ T + N
Sbjct: 15 LKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDH-THDCN 73
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
+ S N +++A +E +E+A + F P+ D+VS+NTLI+ Y + GD + +LF+ M
Sbjct: 74 VFSFNTLISAYAKESYVEVAHQLFDEMPQ-PDSVSYNTLIAAYARRGDTQPAFQLFLEMR 132
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
E + + T + ++A CG+ NV +++H+ + GL S +VS G
Sbjct: 133 EAFLDMDGFTLSGIITA-CGI-NVGLIRQLHALSVVTGLDS--YVSVG------------ 176
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE-KNVVVWTALFSGYVKAQ 370
+++I YS G ++EARR F L+E ++ V W ++ Y++ +
Sbjct: 177 -----------------NALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHR 219
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
+L E +T G++ D L +L A L G + HA +++ G + +
Sbjct: 220 EGSKALELYLE-MTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVG 278
Query: 431 STLVDMYSKCGN-MTYAEIIFQNFIERDLVLYNVMIACYA-HHGHEEKAILLFEEMLEKG 488
S L+D+YSKCG M +F DLVL+N MI+ Y+ + ++A+ F ++ G
Sbjct: 279 SGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQGVG 338
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
+PD + V ++SA + S G + S +I +Y + L A
Sbjct: 339 HRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDA 398
Query: 549 IEFMKSIP 556
++P
Sbjct: 399 KTLFDTMP 406
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 136/284 (47%), Gaps = 7/284 (2%)
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLL 319
H+F L C R+++ K +H+ +K+ + ++ ++S+ + +Y KC ++ A +
Sbjct: 9 HSFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDH 68
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLL 379
N FS +++I Y+ + +E A + FD + + + V + L + Y + + + F L
Sbjct: 69 THDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLF 128
Query: 380 SEFVTKEGVVT-DALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYS 438
E +E + D L ++ AC + L +++HA + G+ + + L+ YS
Sbjct: 129 LEM--REAFLDMDGFTLSGIITACGINVGL--IRQLHALSVVTGLDSYVSVGNALITSYS 184
Query: 439 KCGNMTYAEIIFQNFIE-RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFV 497
K G + A IF E RD V +N M+ Y H KA+ L+ EM +G+ D T
Sbjct: 185 KNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLA 244
Query: 498 AILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGR 541
++L+AF + + +G F++ + + +IDLY +
Sbjct: 245 SVLTAFTNVQDL-LGGLQFHAKLIKSGYHQNSHVGSGLIDLYSK 287
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 216/719 (30%), Positives = 353/719 (49%), Gaps = 78/719 (10%)
Query: 21 LTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFD 80
L T+ N +I Y ++ + +R+LFD MP R+V SWN++++ S + AR+LF+
Sbjct: 123 LERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFE 182
Query: 81 SSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLN 140
P ++LV++ M+ GY E + A +F +M E + D+ S L+ L N
Sbjct: 183 KMPERNLVSWTVMISGYGRIENH-GKAWDIFCKMHR--EGLLPDQSNFASALSAVKGLGN 239
Query: 141 VGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK-CRCYEEACRVFEGCTEEVNLISKNAMV 199
+ L +KT + ++++++YS+ + A + FE E N + + M+
Sbjct: 240 LDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIER-NEYTWSTMI 298
Query: 200 AACCREGEMEMALKTFWRQP------------------ELNDA------------VSWNT 229
AA G ++ A+ + R P ++DA VSWN
Sbjct: 299 AALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNA 358
Query: 230 LISGYVQNGDAEEGLKLFVRMG-ENGVRW------------------------------N 258
LI+GY+QNG E +LF +M N + W +
Sbjct: 359 LITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPS 418
Query: 259 EHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLL 318
+ S AC + ++ ++HS +K G N F + ++ +Y KC NM YA +
Sbjct: 419 LSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFS 478
Query: 319 LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA-QNCEALFD 377
++ S +S + ++EAR FD++ ++ V WT + S Y A Q+ EA+
Sbjct: 479 RMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGA 538
Query: 378 LLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI--STLVD 435
+ F E + ++ IL ILLG C A G++IH +++G MD +LI + L+
Sbjct: 539 FKTMFCEHE--LPNSPILTILLGVCGSLGASKIGQQIHTVAIKLG--MDSELIVANALIS 594
Query: 436 MYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVT 495
MY KCG + IF ERD+ +N +I YA HG +AI +++ M G+ P+ VT
Sbjct: 595 MYFKCG-CADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVT 653
Query: 496 FVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSI 555
FV +L+A H G V+ G K+F SM+ DY ++P +HYACM+DL GR ++ A +F+ +
Sbjct: 654 FVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDM 713
Query: 556 PTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMG 615
P E D VI + L C++++NAE+ A EKL R+E +N YV L+N+Y++ G W E+
Sbjct: 714 PIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVA 773
Query: 616 RIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIAGA 674
+RK M+ + GCSW ++ ++H F GD H + I + L ELY + A
Sbjct: 774 EVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLE----ELYTLLKA 828
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 131/547 (23%), Positives = 231/547 (42%), Gaps = 112/547 (20%)
Query: 43 ESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEG 102
E+R++FD MP R++ +WN++ISA + AR L+D+ ++ T +L GY G
Sbjct: 52 EAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSGY-GRLG 110
Query: 103 YEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFA 162
+A ++F D + + + ++ V+ ++ R+L F S D S
Sbjct: 111 RVLEARRVF------DGMLERNTVAWNAMISCYVQNGDITMARRL--FDAMPSRDVS--- 159
Query: 163 VSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN 222
S N+M+ C +M A F + PE N
Sbjct: 160 -------------------------------SWNSMLTGYCHSLQMVDARNLFEKMPERN 188
Query: 223 DAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIH 282
VSW +ISGY + + + +F +M G+ ++ FASALSA GL N+ + +
Sbjct: 189 -LVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLR 247
Query: 283 SWVLKNGLISNPFVSSGIVDVYCKCEN-----MNYAESML-------------LLKGVRN 324
LK G + + + I++VY + + + + ESM+ L G R
Sbjct: 248 VLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRI 307
Query: 325 SFSI--------------SSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK-- 368
+I +++I G + G +++AR F+ + E VV W AL +GY++
Sbjct: 308 DAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNG 367
Query: 369 ---------------------------AQN--CEALFDLLSEFVTKEGVVTDALILVILL 399
AQN E LL E + + G++ L +
Sbjct: 368 MVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQE-LHRSGMLPSLSSLTSIF 426
Query: 400 GACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLV 459
AC+ AL G ++H+ +++G Q + + L+ MY KC NM YA +F + +D+V
Sbjct: 427 FACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIV 486
Query: 460 LYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSM 519
+N +A + ++A F+ ML + D V++ I+SA+ H F +M
Sbjct: 487 SWNSFLAALVQNDLLDEARNTFDNMLSR----DDVSWTTIISAYAHAEQSNEAMGAFKTM 542
Query: 520 TADYKIS 526
++++
Sbjct: 543 FCEHELP 549
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 153/342 (44%), Gaps = 41/342 (11%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A+K G + N LI +Y K + +R++F M +++ SWN+ ++A +++ L
Sbjct: 442 HSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLL 501
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+AR+ FD+ +D V++ +++ Y +AE +A+ F M EH + +T L
Sbjct: 502 DEARNTFDNMLSRDDVSWTTIISAYAHAE-QSNEAMGAFKTMFC--EHELPNSPILTILL 558
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+C L G+Q+H +K D+ ++LI MY KC C ++ R+F+ E
Sbjct: 559 GVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGC-ADSRRIFDLMEER--- 614
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
D +WNT+I+GY Q+G E +K++ M
Sbjct: 615 ------------------------------DIFTWNTIITGYAQHGLGREAIKMYQHMES 644
Query: 253 NGVRWNEHTFASALSAC--CGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
GV NE TF L+AC GL + + K S GL P + +VD+ + ++
Sbjct: 645 AGVLPNEVTFVGLLNACSHAGLVD-EGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDV 703
Query: 311 NYAESMLLLKGVRNSFSISSMIVGY-SLQGNMEEARRHFDSL 351
AE + + I S ++G + N E +R + L
Sbjct: 704 QGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKL 745
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 164/383 (42%), Gaps = 20/383 (5%)
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
R G + A + F P D ++WN++IS Y NG + L+ + +R T A
Sbjct: 46 RLGRVGEAREVFDAMPR-RDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMR----TGA 100
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
LS L V A+ + +L+ N + ++ Y + ++ A + R
Sbjct: 101 ILLSGYGRLGRVLEARRVFDGMLER----NTVAWNAMISCYVQNGDITMARRLFDAMPSR 156
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV 383
+ S +SM+ GY M +AR F+ + E+N+V WT + SGY + +N +D+ + +
Sbjct: 157 DVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCK-M 215
Query: 384 TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNM 443
+EG++ D L A L + + L+ G + D + + ++++YS+ ++
Sbjct: 216 HREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSV 275
Query: 444 TYAEI-IFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
I F++ IER+ ++ MIA +H G + AI ++E K I A+++
Sbjct: 276 LDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSI----ACRTALITG 331
Query: 503 FRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAV 562
CG ++ F + +S + +I Y + + +A E +P
Sbjct: 332 LAQCGRIDDARILFEQIPEPIVVS-----WNALITGYMQNGMVNEAKELFDKMPFRNTIS 386
Query: 563 ILGSFLNVCRLNRNAELAGEAEE 585
G + R+ E G +E
Sbjct: 387 WAGMIAGYAQNGRSEEALGLLQE 409
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 216/719 (30%), Positives = 353/719 (49%), Gaps = 78/719 (10%)
Query: 21 LTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFD 80
L T+ N +I Y ++ + +R+LFD MP R+V SWN++++ S + AR+LF+
Sbjct: 123 LERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFE 182
Query: 81 SSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLN 140
P ++LV++ M+ GY E + A +F +M E + D+ S L+ L N
Sbjct: 183 KMPERNLVSWTVMISGYGRIENH-GKAWDIFCKMHR--EGLLPDQSNFASALSAVKGLGN 239
Query: 141 VGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK-CRCYEEACRVFEGCTEEVNLISKNAMV 199
+ L +KT + ++++++YS+ + A + FE E N + + M+
Sbjct: 240 LDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIER-NEYTWSTMI 298
Query: 200 AACCREGEMEMALKTFWRQP------------------ELNDA------------VSWNT 229
AA G ++ A+ + R P ++DA VSWN
Sbjct: 299 AALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNA 358
Query: 230 LISGYVQNGDAEEGLKLFVRMG-ENGVRW------------------------------N 258
LI+GY+QNG E +LF +M N + W +
Sbjct: 359 LITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPS 418
Query: 259 EHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLL 318
+ S AC + ++ ++HS +K G N F + ++ +Y KC NM YA +
Sbjct: 419 LSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFS 478
Query: 319 LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA-QNCEALFD 377
++ S +S + ++EAR FD++ ++ V WT + S Y A Q+ EA+
Sbjct: 479 RMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGA 538
Query: 378 LLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI--STLVD 435
+ F E + ++ IL ILLG C A G++IH +++G MD +LI + L+
Sbjct: 539 FKTMFCEHE--LPNSPILTILLGVCGSLGASKIGQQIHTVAIKLG--MDSELIVANALIS 594
Query: 436 MYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVT 495
MY KCG + IF ERD+ +N +I YA HG +AI +++ M G+ P+ VT
Sbjct: 595 MYFKCG-CADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVT 653
Query: 496 FVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSI 555
FV +L+A H G V+ G K+F SM+ DY ++P +HYACM+DL GR ++ A +F+ +
Sbjct: 654 FVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDM 713
Query: 556 PTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMG 615
P E D VI + L C++++NAE+ A EKL R+E +N YV L+N+Y++ G W E+
Sbjct: 714 PIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVA 773
Query: 616 RIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIAGA 674
+RK M+ + GCSW ++ ++H F GD H + I + L ELY + A
Sbjct: 774 EVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLE----ELYTLLKA 828
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 131/547 (23%), Positives = 231/547 (42%), Gaps = 112/547 (20%)
Query: 43 ESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEG 102
E+R++FD MP R++ +WN++ISA + AR L+D+ ++ T +L GY G
Sbjct: 52 EAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSGY-GRLG 110
Query: 103 YEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFA 162
+A ++F D + + + ++ V+ ++ R+L F S D S
Sbjct: 111 RVLEARRVF------DGMLERNTVAWNAMISCYVQNGDITMARRL--FDAMPSRDVS--- 159
Query: 163 VSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN 222
S N+M+ C +M A F + PE N
Sbjct: 160 -------------------------------SWNSMLTGYCHSLQMVDARNLFEKMPERN 188
Query: 223 DAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIH 282
VSW +ISGY + + + +F +M G+ ++ FASALSA GL N+ + +
Sbjct: 189 -LVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLR 247
Query: 283 SWVLKNGLISNPFVSSGIVDVYCKCEN-----MNYAESML-------------LLKGVRN 324
LK G + + + I++VY + + + + ESM+ L G R
Sbjct: 248 VLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRI 307
Query: 325 SFSI--------------SSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK-- 368
+I +++I G + G +++AR F+ + E VV W AL +GY++
Sbjct: 308 DAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNG 367
Query: 369 ---------------------------AQN--CEALFDLLSEFVTKEGVVTDALILVILL 399
AQN E LL E + + G++ L +
Sbjct: 368 MVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQE-LHRSGMLPSLSSLTSIF 426
Query: 400 GACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLV 459
AC+ AL G ++H+ +++G Q + + L+ MY KC NM YA +F + +D+V
Sbjct: 427 FACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIV 486
Query: 460 LYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSM 519
+N +A + ++A F+ ML + D V++ I+SA+ H F +M
Sbjct: 487 SWNSFLAALVQNDLLDEARNTFDNMLSR----DDVSWTTIISAYAHAEQSNEAMGAFKTM 542
Query: 520 TADYKIS 526
++++
Sbjct: 543 FCEHELP 549
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 153/342 (44%), Gaps = 41/342 (11%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A+K G + N LI +Y K + +R++F M +++ SWN+ ++A +++ L
Sbjct: 442 HSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLL 501
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+AR+ FD+ +D V++ +++ Y +AE +A+ F M EH + +T L
Sbjct: 502 DEARNTFDNMLSRDDVSWTTIISAYAHAE-QSNEAMGAFKTMFC--EHELPNSPILTILL 558
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+C L G+Q+H +K D+ ++LI MY KC C ++ R+F+ E
Sbjct: 559 GVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGC-ADSRRIFDLMEER--- 614
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
D +WNT+I+GY Q+G E +K++ M
Sbjct: 615 ------------------------------DIFTWNTIITGYAQHGLGREAIKMYQHMES 644
Query: 253 NGVRWNEHTFASALSAC--CGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
GV NE TF L+AC GL + + K S GL P + +VD+ + ++
Sbjct: 645 AGVLPNEVTFVGLLNACSHAGLVD-EGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDV 703
Query: 311 NYAESMLLLKGVRNSFSISSMIVGY-SLQGNMEEARRHFDSL 351
AE + + I S ++G + N E +R + L
Sbjct: 704 QGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKL 745
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 164/383 (42%), Gaps = 20/383 (5%)
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
R G + A + F P D ++WN++IS Y NG + L+ + +R T A
Sbjct: 46 RLGRVGEAREVFDAMPR-RDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMR----TGA 100
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
LS L V A+ + +L+ N + ++ Y + ++ A + R
Sbjct: 101 ILLSGYGRLGRVLEARRVFDGMLER----NTVAWNAMISCYVQNGDITMARRLFDAMPSR 156
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV 383
+ S +SM+ GY M +AR F+ + E+N+V WT + SGY + +N +D+ + +
Sbjct: 157 DVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCK-M 215
Query: 384 TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNM 443
+EG++ D L A L + + L+ G + D + + ++++YS+ ++
Sbjct: 216 HREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSV 275
Query: 444 TYAEI-IFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
I F++ IER+ ++ MIA +H G + AI ++E K I A+++
Sbjct: 276 LDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSI----ACRTALITG 331
Query: 503 FRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAV 562
CG ++ F + +S + +I Y + + +A E +P
Sbjct: 332 LAQCGRIDDARILFEQIPEPIVVS-----WNALITGYMQNGMVNEAKELFDKMPFRNTIS 386
Query: 563 ILGSFLNVCRLNRNAELAGEAEE 585
G + R+ E G +E
Sbjct: 387 WAGMIAGYAQNGRSEEALGLLQE 409
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 214/679 (31%), Positives = 342/679 (50%), Gaps = 51/679 (7%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L + H +K GL T +L+ Y+ + ++ + D +PE NVFS++T+I
Sbjct: 28 SLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIY 87
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
A K H A S F + L+ N +L
Sbjct: 88 AFSKFHQFHHALSTFSQMLTRGLMPDNRVL------------------------------ 117
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
S + C L + RQ+H + D+ F SSL+ MY KC +A RVF+
Sbjct: 118 ----PSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFD 173
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWR------QPELNDAVSWNTLISGYVQNG 238
E +++S +A+VAA R+G ++ A + F QP L +SWN +I+G+ +G
Sbjct: 174 RMFEP-DVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNL---ISWNGMIAGFNHSG 229
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
E + +F+ M G + T +S L A L ++ IH +V+K GL+S+ VSS
Sbjct: 230 LYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSS 289
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK---- 354
++D+Y KC + + + S ++ I G S G +E + R F L ++
Sbjct: 290 ALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMEL 349
Query: 355 NVVVWTALFSGYVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
NVV WT++ + + ++ EAL +L E + GV +++ + LL AC AAL GK
Sbjct: 350 NVVSWTSMIACCSQNGRDIEAL-ELFRE-MQIAGVKPNSVTIPCLLPACGNIAALMHGKA 407
Query: 414 IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH 473
H + LR G+ D + S L+DMY+KCG + + I F ++LV +N +IA YA HG
Sbjct: 408 AHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGK 467
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA 533
++A+ +F+ M G KPD ++F +LSA G E G YFNSM++ Y I +HYA
Sbjct: 468 AKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYA 527
Query: 534 CMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGN 593
CM+ L RA +LE+A ++ +P DA + G+ L+ CR++ N L A EKL LE +
Sbjct: 528 CMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPS 587
Query: 594 NKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPK 653
N Y+ L+N+YA++G W E+ R+R M+ + GCSW+ V++++H+ GD SHP+
Sbjct: 588 NPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQ 647
Query: 654 TNAIYSVLAIFTGELYEIA 672
I L + E+ ++
Sbjct: 648 MTQIIEKLDKLSMEMKKLG 666
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 70/151 (46%), Gaps = 17/151 (11%)
Query: 406 AALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAE--IIFQNFIERDLVLYNV 463
A+L ++ HA+IL+ G+ D L + L+ Y+ NM +A+ ++ E ++ ++
Sbjct: 27 ASLSQTRQAHAHILKTGLFNDTHLATKLLSHYAN--NMCFADATLVLDLVPEPNVFSFST 84
Query: 464 MIACYAHHGHEEKAILLFEEMLEKGIKPD------AVTFVAILSAFRHCGSVEMGEKYFN 517
+I ++ A+ F +ML +G+ PD AV A LSA + V G +
Sbjct: 85 LIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVH-GIASVS 143
Query: 518 SMTADYKISPETDHYACMIDLYGRANQLEKA 548
+D + + ++ +Y + NQ+ A
Sbjct: 144 GFDSDSFVQ------SSLVHMYIKCNQIRDA 168
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 214/679 (31%), Positives = 342/679 (50%), Gaps = 51/679 (7%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L + H +K GL T +L+ Y+ + ++ + D +PE NVFS++T+I
Sbjct: 28 SLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIY 87
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
A K H A S F + L+ N +L
Sbjct: 88 AFSKFHQFHHALSTFSQMLTRGLMPDNRVL------------------------------ 117
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
S + C L + RQ+H + D+ F SSL+ MY KC +A RVF+
Sbjct: 118 ----PSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFD 173
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWR------QPELNDAVSWNTLISGYVQNG 238
E +++S +A+VAA R+G ++ A + F QP L +SWN +I+G+ +G
Sbjct: 174 RMFEP-DVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNL---ISWNGMIAGFNHSG 229
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
E + +F+ M G + T +S L A L ++ IH +V+K GL+S+ VSS
Sbjct: 230 LYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSS 289
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK---- 354
++D+Y KC + + + S ++ I G S G +E + R F L ++
Sbjct: 290 ALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMEL 349
Query: 355 NVVVWTALFSGYVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
NVV WT++ + + ++ EAL +L E + GV +++ + LL AC AAL GK
Sbjct: 350 NVVSWTSMIACCSQNGRDMEAL-ELFRE-MQIAGVKPNSVTIPCLLPACGNIAALMHGKA 407
Query: 414 IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH 473
H + LR G+ D + S L+DMY+KCG + + I F ++LV +N +IA YA HG
Sbjct: 408 AHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGK 467
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA 533
++A+ +F+ M G KPD ++F +LSA G E G YFNSM++ Y I +HYA
Sbjct: 468 AKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYA 527
Query: 534 CMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGN 593
CM+ L RA +LE+A ++ +P DA + G+ L+ CR++ N L A EKL LE +
Sbjct: 528 CMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPS 587
Query: 594 NKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPK 653
N Y+ L+N+YA++G W E+ R+R M+ + GCSW+ V++++H+ GD SHP+
Sbjct: 588 NPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQ 647
Query: 654 TNAIYSVLAIFTGELYEIA 672
I L + E+ ++
Sbjct: 648 MTQIIENLDKLSMEMKKLG 666
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 70/151 (46%), Gaps = 17/151 (11%)
Query: 406 AALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAE--IIFQNFIERDLVLYNV 463
A+L ++ HA+IL+ G+ D L + L+ Y+ NM +A+ ++ E ++ ++
Sbjct: 27 ASLSQTRQAHAHILKTGLFNDTHLATKLLSHYAN--NMCFADATLVLDLVPEPNVFSFST 84
Query: 464 MIACYAHHGHEEKAILLFEEMLEKGIKPD------AVTFVAILSAFRHCGSVEMGEKYFN 517
+I ++ A+ F +ML +G+ PD AV A LSA + V G +
Sbjct: 85 LIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVH-GIASVS 143
Query: 518 SMTADYKISPETDHYACMIDLYGRANQLEKA 548
+D + + ++ +Y + NQ+ A
Sbjct: 144 GFDSDSFVQ------SSLVHMYIKCNQIRDA 168
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 199/648 (30%), Positives = 351/648 (54%), Gaps = 10/648 (1%)
Query: 7 KEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPE----RNVFSWNTI 62
+E L C+ + G+ L T + LIH K+ ++ ++ + + RN N +
Sbjct: 115 QEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHGRILKCGFGRNKSLNNNL 174
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
+ K LK+ LF+ H+D++++N+M+ Y+ +G +AL LF EM + +
Sbjct: 175 MGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYV-LKGMYREALDLFDEMLVSG--VL 231
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
DE T+ S ++ C KL ++ G++LH ++V G ++ L+DMYSKC +EA +
Sbjct: 232 PDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGL 291
Query: 183 FEGCTE-EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
C E EV+++ +V+ + +++ A + F + E VSW T++SGYVQ G
Sbjct: 292 LSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNE-RSLVSWTTMMSGYVQGGYYC 350
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E L+LF +M V +E + LSAC L + + +H++++ G++ + F+ + ++
Sbjct: 351 ESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALL 410
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D+Y KC ++ A +++ S +SM+ G+ G +++AR F+ + EK++V W
Sbjct: 411 DLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNT 470
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+ + YVK F++ + + V D L+ LL +CA AL+ G ++ YI +
Sbjct: 471 MVNAYVKHDLFNESFEIFCK-MQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKN 529
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
+ +D L + L+DMY KCG + A IF IE+++ ++ M+A YA G +AI L+
Sbjct: 530 EIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLY 589
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGR 541
EM E+G+KPD VTF+A+L+A H G V+ G KYFN + + Y I P HY CM+DL GR
Sbjct: 590 LEMEERGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGR 649
Query: 542 ANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQL 601
LE+ ++F++ +P E D I S + CR + N ELA +A ++L+ ++ N +V L
Sbjct: 650 VGHLEETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLIEIDPTNNGAHVLL 709
Query: 602 ANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDV 649
+N+YA G W ++ ++R ++ + G + + +H F ++
Sbjct: 710 SNIYADAGRWDDVSKVRTKLHETGVPKQPGFTMIEQNGVVHEFVASNL 757
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 171/393 (43%), Gaps = 71/393 (18%)
Query: 214 TFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLR 273
++ +PE ++ WNTL+ ++ G +E L+ + M GV + TF + ACC
Sbjct: 91 SYSHEPE---SIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNF 147
Query: 274 NVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIV 333
+VK E+H +LK G N +++ ++ +Y KC
Sbjct: 148 DVKLGSEVHGRILKCGFGRNKSLNNNLMGLYSKC-------------------------- 181
Query: 334 GYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV-KAQNCEALFDLLSEFVTKEGVVTDA 392
G ++E + F+ +T ++V+ W + S YV K EAL DL E + GV+ D
Sbjct: 182 -----GKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREAL-DLFDEMLVS-GVLPDE 234
Query: 393 LILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNM--------- 443
+ +V L+ CA L GK +H YI+ + + L++ LVDMYSKCG M
Sbjct: 235 ITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSR 294
Query: 444 ------------------------TYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
A +F ER LV + M++ Y G+ +++
Sbjct: 295 CDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLE 354
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
LF++M + + PD V V +LSA H ++G + ++ Y + + ++DLY
Sbjct: 355 LFQQMRFENVIPDEVALVTVLSACVHLEDFDLG-RSVHAFIVTYGMLVDGFLGNALLDLY 413
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLNVCR 572
+ +L++A+ + +P + A CR
Sbjct: 414 AKCGKLDEALRTFEQLPCKSAASWNSMLDGFCR 446
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 155/363 (42%), Gaps = 38/363 (10%)
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLL 319
H L +C +R IH+ ++ LI +P ++S ++ N++ A +L
Sbjct: 36 HWIIDLLKSCSNIREFS---PIHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQIL-- 90
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLL 379
S+S E ++W L +K + + +
Sbjct: 91 -----SYS------------------------HEPESIIWNTLLENKLKEGCPQEVLECY 121
Query: 380 SEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
VT +GV+ D L+ AC + G E+H IL+ G +K L + L+ +YSK
Sbjct: 122 YHMVT-QGVLLDISTFHFLIHACCKNFDVKLGSEVHGRILKCGFGRNKSLNNNLMGLYSK 180
Query: 440 CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
CG + +F+ RD++ +N MI+CY G +A+ LF+EML G+ PD +T V++
Sbjct: 181 CGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSL 240
Query: 500 LSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE 559
+S +EMG K + D K+ C++D+Y + ++++A + E
Sbjct: 241 VSTCAKLKDLEMG-KRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESE 299
Query: 560 DAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRK 619
V+L + L + N +A + ++ + + + + Y G + E + +
Sbjct: 300 VDVVLWTTLVSGYVKSNK--IDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQ 357
Query: 620 QMR 622
QMR
Sbjct: 358 QMR 360
>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 721
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 209/643 (32%), Positives = 323/643 (50%), Gaps = 70/643 (10%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K+ + +T +N +++YSK L +R FD E NVFS+N I+ A K +
Sbjct: 31 HALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPNVFSYNVIVKAYAKDSKI 90
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
AR LFD +P D V+YN+++ GY +A A A+ LF M+ +D FT++ +
Sbjct: 91 HIARQLFDENPQPDTVSYNTLISGYADARETVA-AMVLFKRMRELG--FEVDGFTLSGLI 147
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C V +QLH F AVS D YS VN
Sbjct: 148 AACCD--RVDLIKQLHCF-----------AVSGGFDSYS-----------------SVN- 176
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
NA V + G + A+ F+ L D VSWN++I Y Q+ + + L L+ M
Sbjct: 177 ---NAFVTYYSKGGLLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIF 233
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G + + T AS L+A L ++ ++ H ++K G N V SG++D Y KC
Sbjct: 234 KGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKC----- 288
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G R+ M ++ + F + ++V+W + SGY + N
Sbjct: 289 --------GGRD---------------GMSDSEKVFQEILSPDLVLWNTMISGY--SMNE 323
Query: 373 EALFDLLSEF--VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
E + + F + + G D V + AC+ ++ GK+IH ++ + ++ +
Sbjct: 324 EHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRISV 383
Query: 431 S-TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+ L+ +Y K GN+ A +F E + V +N MI YA HGH +A+ L++ ML+ GI
Sbjct: 384 NNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGI 443
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
P+ +TFVAILSA HCG V+ G+KYFN+M +KI PE +HY+CMIDL GRA +LE+A
Sbjct: 444 APNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAE 503
Query: 550 EFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEG 609
F+ ++P + +V + L CR ++N LA A ++L+ ++ YV LAN+YA G
Sbjct: 504 RFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQPLAATPYVMLANMYADAG 563
Query: 610 NWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
W EM +RK MRG + + GCSW+ V+ + H+F D SHP
Sbjct: 564 KWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHP 606
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 192/418 (45%), Gaps = 41/418 (9%)
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
G+ LHA VK+ +S + + +++YSKC C A F+ TEE N+ S N +V A
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDS-TEEPNVFSYNVIVKAYA 85
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
++ ++ +A + F P+ D VS+NTLISGY + + LF RM E G + T +
Sbjct: 86 KDSKIHIARQLFDENPQ-PDTVSYNTLISGYADARETVAAMVLFKRMRELGFEVDGFTLS 144
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLL-LKGV 322
++ACC V K++H + + G S V++ V Y K + A S+ + G+
Sbjct: 145 GLIAACCD--RVDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDGL 202
Query: 323 RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF 382
R+ S +SMIV Y G +E + AL+ E +F
Sbjct: 203 RDEVSWNSMIVAY---GQHKEGAKAL------------ALYK--------EMIF------ 233
Query: 383 VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCG- 441
+G D L +L A L G++ H +++ G + + S L+D YSKCG
Sbjct: 234 ---KGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGG 290
Query: 442 --NMTYAEIIFQNFIERDLVLYNVMIACYA-HHGHEEKAILLFEEMLEKGIKPDAVTFVA 498
M+ +E +FQ + DLVL+N MI+ Y+ + H E+A+ F +M G +PD +FV
Sbjct: 291 RDGMSDSEKVFQEILSPDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVC 350
Query: 499 ILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIP 556
+ SA + S G++ S +I LY ++ L A +P
Sbjct: 351 VTSACSNLSSPSQGKQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMP 408
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 118/255 (46%), Gaps = 10/255 (3%)
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
N +W +F L R++ K +H+ +K+ + S+ ++S+ V++Y KC ++Y
Sbjct: 2 NQTQWKFKSFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSY 61
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
A + N FS + ++ Y+ + AR+ FD + + V + L SGY A+
Sbjct: 62 ARAAFDSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARET 121
Query: 373 EA---LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
A LF + E G D L L+ AC + L K++H + + G +
Sbjct: 122 VAAMVLFKRMREL----GFEVDGFTLSGLIAACCDRVDLI--KQLHCFAVSGGFDSYSSV 175
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIE-RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
+ V YSK G + A +F RD V +N MI Y H KA+ L++EM+ KG
Sbjct: 176 NNAFVTYYSKGGLLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKG 235
Query: 489 IKPDAVTFVAILSAF 503
K D T ++L+A
Sbjct: 236 FKIDMFTLASVLNAL 250
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 195/608 (32%), Positives = 322/608 (52%), Gaps = 35/608 (5%)
Query: 54 RNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIE 113
+++F N+++ + +L AR +FD +++V++ SM+CGY + + DA+ LF
Sbjct: 167 KDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRD-FAKDAVDLFFR 225
Query: 114 MQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKC 173
M DE + + T+ ++ C KL ++ G +++AF+ + + + VS+L+DMY KC
Sbjct: 226 MVR-DEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKC 284
Query: 174 RCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISG 233
+ A R+F+ G + L N + S
Sbjct: 285 NAIDVAKRLFD-------------------EYGASNLDL--------------CNAMASN 311
Query: 234 YVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISN 293
YV+ G E L +F M ++GVR + + SA+S+C LRN+ K H +VL+NG S
Sbjct: 312 YVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESW 371
Query: 294 PFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
+ + ++D+Y KC + A + + + +S++ GY G ++ A F+++ E
Sbjct: 372 DNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPE 431
Query: 354 KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
KN+V W + SG V+ E ++ ++EGV D + ++ + AC AL K
Sbjct: 432 KNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKW 491
Query: 414 IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH 473
I+ YI + G+Q+D +L +TLVDM+S+CG+ A IF + RD+ + I A G+
Sbjct: 492 IYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGN 551
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA 533
E+AI LF++M+E+G+KPD V FV L+A H G V+ G++ F SM + +SPE HY
Sbjct: 552 AERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYG 611
Query: 534 CMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGN 593
CM+DL GRA LE+A++ ++ +P E + VI S L CR+ N E+A A EK+ L
Sbjct: 612 CMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPE 671
Query: 594 NKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPK 653
YV L+NVYA+ G W +M ++R M+ + G S + + + H FT GD SHP+
Sbjct: 672 RTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPE 731
Query: 654 TNAIYSVL 661
I ++L
Sbjct: 732 MPNIEAML 739
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 156/617 (25%), Positives = 258/617 (41%), Gaps = 149/617 (24%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT----------- 61
H +K G N L+H Y++ L +RK+FDEM ERNV SW +
Sbjct: 157 HGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFA 216
Query: 62 -------------------------IISACIKSHDLKQ---------------------- 74
+ISAC K DL+
Sbjct: 217 KDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSA 276
Query: 75 -------------ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
A+ LFD +L N+M Y+ +G +AL +F M D +
Sbjct: 277 LVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVR-QGLTREALGVFNLMM--DSGV 333
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
R D ++ S ++ C +L N+ +G+ H ++++ ++ ++LIDMY KC + A R
Sbjct: 334 RPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFR 393
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F+ + + +++ N++VA GE++ A +TF PE N VSWNT+ISG VQ E
Sbjct: 394 IFDRMSNKT-VVTWNSIVAGYVENGEVDAAWETFETMPEKN-IVSWNTIISGLVQGSLFE 451
Query: 242 EGLKLFVRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
E +++F M + GV + T S SAC L + AK I+ ++ KNG+ + + + +
Sbjct: 452 EAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTL 511
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
VD++ +C G+ E A F+SLT ++V WT
Sbjct: 512 VDMFSRC-------------------------------GDPESAMSIFNSLTNRDVSAWT 540
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
A A N E +L + + ++G+ D + V L AC+ + GKEI +L+
Sbjct: 541 AAIGAMAMAGNAERAIELFDDMI-EQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLK 599
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
+ + + + V Y M+ G E+A+ L
Sbjct: 600 L------------------------------HGVSPEDVHYGCMVDLLGRAGLLEEAVQL 629
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE-TDHYACMIDLY 539
E+M ++P+ V + ++L+A R G+VEM + ++PE T Y + ++Y
Sbjct: 630 IEDM---PMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQV---LAPERTGSYVLLSNVY 683
Query: 540 ---GRANQLEKAIEFMK 553
GR N + K MK
Sbjct: 684 ASAGRWNDMAKVRLSMK 700
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 155/322 (48%), Gaps = 36/322 (11%)
Query: 184 EGCTEEVNLISKNAMVAACCREGEME---MALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+G +V+ I+K +VA C G E A + F +N+LI GY +G
Sbjct: 58 QGLDNDVSTITK--LVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLC 115
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
E + LF+RM +G+ +++TF LSAC R +IH ++K G + FV + +
Sbjct: 116 NEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSL 175
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
V Y +C ++ A + RN S +SMI GY ARR F K+ V
Sbjct: 176 VHFYAECGELDSARKVFDEMSERNVVSWTSMICGY--------ARRDF----AKDAV--- 220
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
DL V E V +++ +V ++ ACA L G++++A+I
Sbjct: 221 ----------------DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRN 264
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
G++++ ++S LVDMY KC + A+ +F + +L L N M + Y G +A+ +
Sbjct: 265 SGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGV 324
Query: 481 FEEMLEKGIKPDAVTFVAILSA 502
F M++ G++PD ++ ++ +S+
Sbjct: 325 FNLMMDSGVRPDRISMLSAISS 346
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 149/338 (44%), Gaps = 43/338 (12%)
Query: 12 CHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHD 71
CH ++ G N LI +Y K + + ++FD M + V +WN+I++ +++ +
Sbjct: 359 CHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGE 418
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
+ A F++ P K++V++N+++ G + +E +A+++F MQS E + D T+ S
Sbjct: 419 VDAAWETFETMPEKNIVSWNTIISGLVQGSLFE-EAIEVFCSMQS-QEGVNADGVTMMSI 476
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
+ C L + + ++ ++ K ++L+DM+S+C E A +F T
Sbjct: 477 ASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR-- 534
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
D +W I G+AE ++LF M
Sbjct: 535 -------------------------------DVSAWTAAIGAMAMAGNAERAIELFDDMI 563
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG-IVDVYCKC--- 307
E G++ + F AL+AC V+ KEI +LK +S V G +VD+ +
Sbjct: 564 EQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLL 623
Query: 308 -ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEA 344
E + E M + N +S++ +QGN+E A
Sbjct: 624 EEAVQLIEDMPMEP---NDVIWNSLLAACRVQGNVEMA 658
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 338 bits (866), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 195/608 (32%), Positives = 322/608 (52%), Gaps = 35/608 (5%)
Query: 54 RNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIE 113
+++F N+++ + +L AR +FD +++V++ SM+CGY + + DA+ LF
Sbjct: 167 KDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRD-FAKDAVDLFFR 225
Query: 114 MQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKC 173
M DE + + T+ ++ C KL ++ G +++AF+ + + + VS+L+DMY KC
Sbjct: 226 MVR-DEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKC 284
Query: 174 RCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISG 233
+ A R+F+ G + L N + S
Sbjct: 285 NAIDVAKRLFD-------------------EYGASNLDL--------------CNAMASN 311
Query: 234 YVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISN 293
YV+ G E L +F M ++GVR + + SA+S+C LRN+ K H +VL+NG S
Sbjct: 312 YVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESW 371
Query: 294 PFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
+ + ++D+Y KC + A + + + +S++ GY G ++ A F+++ E
Sbjct: 372 DNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPE 431
Query: 354 KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
KN+V W + SG V+ E ++ ++EGV D + ++ + AC AL K
Sbjct: 432 KNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKW 491
Query: 414 IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH 473
I+ YI + G+Q+D +L +TLVDM+S+CG+ A IF + RD+ + I A G+
Sbjct: 492 IYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGN 551
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA 533
E+AI LF++M+E+G+KPD V FV L+A H G V+ G++ F SM + +SPE HY
Sbjct: 552 AERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYG 611
Query: 534 CMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGN 593
CM+DL GRA LE+A++ ++ +P E + VI S L CR+ N E+A A EK+ L
Sbjct: 612 CMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPE 671
Query: 594 NKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPK 653
YV L+NVYA+ G W +M ++R M+ + G S + + + H FT GD SHP+
Sbjct: 672 RTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPE 731
Query: 654 TNAIYSVL 661
I ++L
Sbjct: 732 MPNIEAML 739
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 156/617 (25%), Positives = 258/617 (41%), Gaps = 149/617 (24%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT----------- 61
H +K G N L+H Y++ L +RK+FDEM ERNV SW +
Sbjct: 157 HGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFA 216
Query: 62 -------------------------IISACIKSHDLKQ---------------------- 74
+ISAC K DL+
Sbjct: 217 KDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSA 276
Query: 75 -------------ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
A+ LFD +L N+M Y+ +G +AL +F M D +
Sbjct: 277 LVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVR-QGLTREALGVFNLMM--DSGV 333
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
R D ++ S ++ C +L N+ +G+ H ++++ ++ ++LIDMY KC + A R
Sbjct: 334 RPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFR 393
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F+ + + +++ N++VA GE++ A +TF PE N VSWNT+ISG VQ E
Sbjct: 394 IFDRMSNKT-VVTWNSIVAGYVENGEVDAAWETFETMPEKN-IVSWNTIISGLVQGSLFE 451
Query: 242 EGLKLFVRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
E +++F M + GV + T S SAC L + AK I+ ++ KNG+ + + + +
Sbjct: 452 EAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTL 511
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
VD++ +C G+ E A F+SLT ++V WT
Sbjct: 512 VDMFSRC-------------------------------GDPESAMSIFNSLTNRDVSAWT 540
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
A A N E +L + + ++G+ D + V L AC+ + GKEI +L+
Sbjct: 541 AAIGAMAMAGNAERAIELFDDMI-EQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLK 599
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
+ + + + V Y M+ G E+A+ L
Sbjct: 600 L------------------------------HGVSPEDVHYGCMVDLLGRAGLLEEAVQL 629
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE-TDHYACMIDLY 539
E+M ++P+ V + ++L+A R G+VEM + ++PE T Y + ++Y
Sbjct: 630 IEDM---PMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQV---LAPERTGSYVLLSNVY 683
Query: 540 ---GRANQLEKAIEFMK 553
GR N + K MK
Sbjct: 684 ASAGRWNDMAKVRLSMK 700
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 155/322 (48%), Gaps = 36/322 (11%)
Query: 184 EGCTEEVNLISKNAMVAACCREGEME---MALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+G +V+ I+K +VA C G E A + F +N+LI GY +G
Sbjct: 58 QGLDNDVSTITK--LVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLC 115
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
E + LF+RM +G+ +++TF LSAC R +IH ++K G + FV + +
Sbjct: 116 NEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSL 175
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
V Y +C ++ A + RN S +SMI GY ARR F K+ V
Sbjct: 176 VHFYAECGELDSARKVFDEMSERNVVSWTSMICGY--------ARRDF----AKDAV--- 220
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
DL V E V +++ +V ++ ACA L G++++A+I
Sbjct: 221 ----------------DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRN 264
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
G++++ ++S LVDMY KC + A+ +F + +L L N M + Y G +A+ +
Sbjct: 265 SGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGV 324
Query: 481 FEEMLEKGIKPDAVTFVAILSA 502
F M++ G++PD ++ ++ +S+
Sbjct: 325 FNLMMDSGVRPDRISMLSAISS 346
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 149/338 (44%), Gaps = 43/338 (12%)
Query: 12 CHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHD 71
CH ++ G N LI +Y K + + ++FD M + V +WN+I++ +++ +
Sbjct: 359 CHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGE 418
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
+ A F++ P K++V++N+++ G + +E +A+++F MQS E + D T+ S
Sbjct: 419 VDAAWETFETMPEKNIVSWNTIISGLVQGSLFE-EAIEVFCSMQS-QEGVNADGVTMMSI 476
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
+ C L + + ++ ++ K ++L+DM+S+C E A +F T
Sbjct: 477 ASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR-- 534
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
D +W I G+AE ++LF M
Sbjct: 535 -------------------------------DVSAWTAAIGAMAMAGNAERAIELFDDMI 563
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG-IVDVYCKC--- 307
E G++ + F AL+AC V+ KEI +LK +S V G +VD+ +
Sbjct: 564 EQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLL 623
Query: 308 -ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEA 344
E + E M + N +S++ +QGN+E A
Sbjct: 624 EEAVQLIEDMPMEP---NDVIWNSLLAACRVQGNVEMA 658
>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
Length = 864
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 199/632 (31%), Positives = 329/632 (52%), Gaps = 77/632 (12%)
Query: 54 RNVFSWNTIISACI-----KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADAL 108
+NVFS + ++ I K+ +L AR F PH ++ T N+M+ G + G A+A+
Sbjct: 280 KNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRT-GLGAEAM 338
Query: 109 KLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLID 168
+LF M + + D +++ + C ++ G Q+H VK+ D ++++D
Sbjct: 339 QLFQFMTRSG--VGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILD 396
Query: 169 MYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWN 228
+Y KC+ EA VF+ EME D+VSWN
Sbjct: 397 LYGKCKALVEAYLVFQ----------------------EMEQ-----------RDSVSWN 423
Query: 229 TLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKN 288
+I+ QN E+ + M +G+ ++ T+ S L AC GL++++ +H +K+
Sbjct: 424 AIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKS 483
Query: 289 GLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHF 348
GL + FVSS +VD+YCKC + A+ + G + S +S+I G+SL EEA+R F
Sbjct: 484 GLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFF 543
Query: 349 DSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAAL 408
+ + GV D +L CA A +
Sbjct: 544 SEMLDM--------------------------------GVKPDHFTYATVLDTCANLATI 571
Query: 409 HPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACY 468
GK+IH I++ + D+ + STLVDMY+KCGNM + ++F+ + D V +N MI Y
Sbjct: 572 ELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKARKLDFVSWNAMICGY 631
Query: 469 AHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE 528
A HG +A+ +FE M + P+ TFVA+L A H G ++ G +YF+ MT+ YK+ P+
Sbjct: 632 ALHGQGLEALEMFERMQRANVVPNHATFVAVLRACSHVGLLDDGCQYFHLMTSRYKLVPQ 691
Query: 529 TDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLL 588
+H+ACM+D+ GR+ ++A+EF++S+P E DAV+ + L++C++ ++ E+A A +L
Sbjct: 692 LEHFACMVDILGRSKGPQEALEFIRSMPIEADAVVWKTLLSICKIRQDVEVAETAASNVL 751
Query: 589 RLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGD 648
RL+ ++ + Y+ L+NVYA G W ++ R R+ MR + + GCSW+ V+ E+H F VGD
Sbjct: 752 RLDPDDASVYILLSNVYAGSGKWVDVSRTRRLMRQGRLRKEPGCSWIEVQSEMHGFLVGD 811
Query: 649 VSHPKTNAIYSVLAIFTGEL----YEIAGAFY 676
HP++ +Y +L GE+ YE A A +
Sbjct: 812 KVHPRSKEVYEMLNSLIGEMKLSGYEPASALF 843
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 143/501 (28%), Positives = 235/501 (46%), Gaps = 70/501 (13%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + + +G TT +N L+ +Y++ + +FD MP R+ SWNT+++A + + D
Sbjct: 42 HARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFDTMPHRDTVSWNTMLTAYVHAGDT 101
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
A SLF + P D+V++N+++ GY G +++ L +EM + + +D T+ L
Sbjct: 102 DTAASLFGTMPDPDVVSWNTLISGYCQ-HGMFRNSVGLSMEM--SRRGVALDRTTLAVLL 158
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C L ++ G Q+HA VKT + A S+L+DMY KCR ++A R F G E
Sbjct: 159 KSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDALRFFHGMGER--- 215
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
++VSW I+G VQN G++LFV+M
Sbjct: 216 ------------------------------NSVSWGAAIAGCVQNEQYTRGMELFVQMQR 245
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G+ ++ +ASA +C + + A+++H+ +KN S+ V + IVDVY K
Sbjct: 246 LGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKA----- 300
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ-N 371
GN+ +ARR F L NV A+ G V+
Sbjct: 301 --------------------------GNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLG 334
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
EA+ L +F+T+ GV D + L + ACA G ++H ++ G +D + +
Sbjct: 335 AEAM--QLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRN 392
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
++D+Y KC + A ++FQ +RD V +N +IA + E I EML G++P
Sbjct: 393 AILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEP 452
Query: 492 DAVTFVAILSAFRHCGSVEMG 512
D T+ ++L A S+E G
Sbjct: 453 DDFTYGSVLKACAGLQSLEYG 473
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 166/372 (44%), Gaps = 71/372 (19%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACI 67
+ L H A+K+G + N ++ +Y K L E+ +F EM +R+ SWN II+A
Sbjct: 371 QGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAA-- 428
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFT 127
L+Q D+ H N ML G E D+FT
Sbjct: 429 ----LEQNECYEDTIAH-----LNEML-----RSGMEP------------------DDFT 456
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
S L C L ++ +G +H +K+ F S+++DMY KC EA ++ +
Sbjct: 457 YGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHD--- 513
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
R G E+ VSWN++ISG+ +EE + F
Sbjct: 514 ----------------RIGGQEL--------------VSWNSIISGFSLTKQSEEAQRFF 543
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
M + GV+ + T+A+ L C L ++ K+IH ++K ++ + ++SS +VD+Y KC
Sbjct: 544 SEMLDMGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKC 603
Query: 308 ENMNYAESMLLLKGVR--NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
NM +S+L+ + R + S ++MI GY+L G EA F+ + NVV A F
Sbjct: 604 GNM--PDSLLMFEKARKLDFVSWNAMICGYALHGQGLEALEMFERMQRANVVPNHATFVA 661
Query: 366 YVKAQNCEALFD 377
++A + L D
Sbjct: 662 VLRACSHVGLLD 673
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 177/410 (43%), Gaps = 45/410 (10%)
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
G+ HA M+ + + F + L+ MY++C A VF+ + +S N M+ A
Sbjct: 38 GQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFDTMPHR-DTVSWNTMLTAYV 96
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
G+ + A F P+ D VSWNTLISGY Q+G + L + M GV + T A
Sbjct: 97 HAGDTDTAASLFGTMPD-PDVVSWNTLISGYCQHGMFRNSVGLSMEMSRRGVALDRTTLA 155
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
L +C GL ++ +IH+ +K GL ++ S +VD+Y KC +
Sbjct: 156 VLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRS-------------- 201
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV 383
+++A R F + E+N V W A +G V+ + +L + +
Sbjct: 202 -----------------LDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQ-M 243
Query: 384 TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNM 443
+ G+ +CA L +++HA+ ++ D+ + + +VD+Y+K GN+
Sbjct: 244 QRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNL 303
Query: 444 TYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAF 503
A F ++ N M+ G +A+ LF+ M G+ D ++ + SA
Sbjct: 304 VDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSA- 362
Query: 504 RHCGSVEMGEKYFNSMTAD-YKISPETDHYAC----MIDLYGRANQLEKA 548
C V + YF + + D C ++DLYG+ L +A
Sbjct: 363 --CAEV---KGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEA 407
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 116/275 (42%), Gaps = 69/275 (25%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L+ L+ H +AIK+GL L ++ ++ +Y K + E++KL D + + + SWN+IIS
Sbjct: 469 SLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIIS 528
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
F + + +A + F EM D ++ D
Sbjct: 529 G-------------FSLTKQSE-------------------EAQRFFSEM--LDMGVKPD 554
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
FT + L+ C L + G+Q+H ++K + S+L+DMY+KC
Sbjct: 555 HFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKC----------- 603
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
G M +L F + +L D VSWN +I GY +G E L
Sbjct: 604 ---------------------GNMPDSLLMFEKARKL-DFVSWNAMICGYALHGQGLEAL 641
Query: 245 KLFVRMGENGVRWNEHTFASALSAC--CGLRNVKC 277
++F RM V N TF + L AC GL + C
Sbjct: 642 EMFERMQRANVVPNHATFVAVLRACSHVGLLDDGC 676
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 204/699 (29%), Positives = 348/699 (49%), Gaps = 101/699 (14%)
Query: 28 TNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDL 87
TNQL++ SK + ++RKLFD+MP+++ +SWNT+IS+ + L +AR LFD K
Sbjct: 68 TNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSS 127
Query: 88 VTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQL 147
+T++S++ GY G + +A LF M+ E + +FT+ S L +C L + G +
Sbjct: 128 ITWSSIISGYCKF-GCKVEAFDLFRSMRL--EGWKASQFTLGSVLRVCSSLGLIQTGEMI 184
Query: 148 HAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGE 207
H F+VK + + F V+ L+DMY+KC+C EA +F+G
Sbjct: 185 HGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKG---------------------- 222
Query: 208 MEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALS 267
+E K + V W +++GY QNGD + ++ F M GV N++TF + L+
Sbjct: 223 LEFDRK---------NHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILT 273
Query: 268 ACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFS 327
AC + +++H +++K+G SN +V S +VD+Y KC ++ A++ML + S
Sbjct: 274 ACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVS 333
Query: 328 ISSMIVGYSLQGNMEEARRHFDSLTEKNV------------------------------- 356
+S++VG+ G EEA R F ++ +N+
Sbjct: 334 WNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINPKSVHGLIIKT 393
Query: 357 ------VVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALI---------------- 394
+V AL Y K + + + + + + K+ + +L+
Sbjct: 394 GFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIF 453
Query: 395 --------------LVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC 440
+ +L ACA L GK++H ++ G++ + + ++LV MY+KC
Sbjct: 454 CDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKC 513
Query: 441 GNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAIL 500
G + A+ IF + +D++ + +I YA +G ++ ++ M+ G +PD +TF+ +L
Sbjct: 514 GCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLL 573
Query: 501 SAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEED 560
A H G V+ G KYF M Y I P +HYACMIDL+GR+ +L++A + + + + D
Sbjct: 574 FACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPD 633
Query: 561 AVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQ 620
A + S L+ CR++ N ELA A L LE N YV L+N+Y+A W ++ +IRK
Sbjct: 634 ATVWKSLLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKL 693
Query: 621 MRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYS 659
M+ + GCSW+ + ++ F D HP+ IY+
Sbjct: 694 MKSKGIVKEPGCSWLEINSRVNTFISDDRGHPREAEIYT 732
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 160/343 (46%), Gaps = 64/343 (18%)
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS------------------ 232
++ N ++ + G++ A K F + P+ D SWNT+IS
Sbjct: 64 SIYQTNQLLNQLSKSGQVNDARKLFDKMPQ-KDEYSWNTMISSYVNVGRLVEARELFDGC 122
Query: 233 -------------GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAK 279
GY + G E LF M G + ++ T S L C L ++ +
Sbjct: 123 SCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGE 182
Query: 280 EIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQG 339
IH +V+KNG N FV +G+VD+Y KC+ ++ AE L KG+
Sbjct: 183 MIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAE--FLFKGLE---------------- 224
Query: 340 NMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDL-LSEFVTKEGVVTDALILVIL 398
FD KN V+WTA+ +GY AQN + + ++ +GV + +
Sbjct: 225 --------FD---RKNHVLWTAMVTGY--AQNGDGYKAVEFFRYMHAQGVECNQYTFPTI 271
Query: 399 LGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDL 458
L AC+ A G+++H +I++ G + + S LVDMY+KCG++ A+ + + + D+
Sbjct: 272 LTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDV 331
Query: 459 VLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
V +N ++ + HG EE+A+ LF+ M + +K D TF ++L+
Sbjct: 332 VSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLN 374
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/478 (21%), Positives = 205/478 (42%), Gaps = 111/478 (23%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K+G + L+ +Y+K L+ ++ + + M + +V SW
Sbjct: 288 HGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSW------------- 334
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
NS++ G++ G E +AL+LF M ++++D++T S L
Sbjct: 335 ------------------NSLMVGFVR-HGLEEEALRLFKNMHG--RNMKIDDYTFPSVL 373
Query: 133 NLCVKLLNVGF--GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
N CV VG + +H ++KT + ++L+DMY+K
Sbjct: 374 NCCV----VGSINPKSVHGLIIKTGFENYKLVSNALVDMYAK------------------ 411
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
G+M+ A F + E D +SW +L++GY QN EE LK+F M
Sbjct: 412 --------------TGDMDCAYTVFEKMLE-KDVISWTSLVTGYAQNNSHEESLKIFCDM 456
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
GV ++ AS LSAC L ++ K++H +K+GL + V + +V +Y KC +
Sbjct: 457 RVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCL 516
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
+ A+++ + V++ + +++IVGY+ G + + +D++
Sbjct: 517 DDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVS----------------- 559
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM-GVQMDKKL 429
G D + + LL AC+ + G++ + ++ G++ +
Sbjct: 560 ---------------SGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEH 604
Query: 430 ISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMI-ACYAHHG---HEEKAILLFE 482
+ ++D++ + G + A +++ Q ++ D ++ ++ AC H E A LFE
Sbjct: 605 YACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAERAATNLFE 662
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 205/647 (31%), Positives = 331/647 (51%), Gaps = 87/647 (13%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
++ N ++ Y ++N RE+R LFD+MPERN SWN +IS +K+ + +AR FD+ P +
Sbjct: 48 VSWNSMVAGYFQNNRPREARYLFDKMPERNTVSWNGLISGYVKNRMVSEARKAFDTMPER 107
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR 145
++V++ +M+ GY+ EG ++A LF + M E V S + L+ V
Sbjct: 108 NVVSWTAMVRGYVQ-EGLVSEAETLFWQ---------MPEKNVVSWTVMLGGLIQV---- 153
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
R +EA +F+ +++++ M++ C+E
Sbjct: 154 ----------------------------RRIDEARGLFD-IMPVKDVVARTNMISGYCQE 184
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASA 265
G + A + F P N +SW T+ISGYVQNG + KLF M E NE ++ +
Sbjct: 185 GRLAEARELFDEMPRRN-VISWTTMISGYVQNGQVDVARKLFEVMPEK----NEVSWTAM 239
Query: 266 LSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNS 325
L Y + + A + V+
Sbjct: 240 LMG-----------------------------------YTQGGRIEEASELFDAMPVKAV 264
Query: 326 FSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY-VKAQNCEALFDLLSEFVT 384
+ ++MI+G+ G + +AR+ FD + EK+ W+A+ Y K EAL L +
Sbjct: 265 VACNAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALN--LFALMQ 322
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
+EGV ++ L+ +L CA A+L G+++HA +++ D + S L+ MY KCG++
Sbjct: 323 REGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLV 382
Query: 445 YAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR 504
A IF F +D+V++N +I YA HG E+A+ +F EM G+ D VTFV +LSA
Sbjct: 383 KARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACS 442
Query: 505 HCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVIL 564
+ G V+ G + F SM + Y + P+T+HYACM+DL GRA + A++ ++ +P E DA+I
Sbjct: 443 YTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIW 502
Query: 565 GSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGM 624
G+ L CR + N LA A +KLL+LE N Y+ L+N+YA++G W ++ +R+ MR
Sbjct: 503 GALLGACRTHMNMNLAEVAAKKLLQLEPKNAGPYILLSNIYASKGRWGDVAELRRNMRVK 562
Query: 625 KGNRFAGCSWVYVEHEIHIFTVG-DVSHPKTNAIYSVLAIFTGELYE 670
K ++ GCSW+ VE +H+FT G HP+ ++I +L G L E
Sbjct: 563 KVSKSPGCSWIEVEKRVHMFTGGVSTKHPELSSIMKMLEKLDGMLRE 609
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 122/480 (25%), Positives = 220/480 (45%), Gaps = 79/480 (16%)
Query: 25 TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII--------------------- 63
T++ N LI Y K+ ++ E+RK FD MPERNV SW ++
Sbjct: 78 TVSWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPE 137
Query: 64 ----------SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIE 113
I+ + +AR LFD P KD+V +M+ GY EG A+A +LF
Sbjct: 138 KNVVSWTVMLGGLIQVRRIDEARGLFDIMPVKDVVARTNMISGYCQ-EGRLAEARELF-- 194
Query: 114 MQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKC 173
DE R + + T+ ++ V+ V R+L M + N+ S ++++ Y++
Sbjct: 195 ----DEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPE-KNEVSW---TAMLMGYTQG 246
Query: 174 RCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISG 233
EEA +F+ + +++ NAM+ + GE+ A + F + E +D +W+ +I
Sbjct: 247 GRIEEASELFDAMPVKA-VVACNAMILGFGQNGEVAKARQVFDQIREKDDG-TWSAMIKV 304
Query: 234 YVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISN 293
Y + G E L LF M GV+ N + S LS C L ++ +++H+ ++K+ S+
Sbjct: 305 YERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSD 364
Query: 294 PFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
FV+S ++ +Y KC G++ +AR+ FD +
Sbjct: 365 VFVASVLITMYVKC-------------------------------GDLVKARQIFDRFSP 393
Query: 354 KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
K++V+W ++ +GY + E + E + G+ TD + V +L AC+ + G E
Sbjct: 394 KDIVMWNSIITGYAQHGLVEEALQVFHEMCS-SGMATDGVTFVGVLSACSYTGKVKEGLE 452
Query: 414 I-HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMI-ACYAH 470
I + + V+ + + +VD+ + G + A + Q +E D +++ ++ AC H
Sbjct: 453 IFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGACRTH 512
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/325 (19%), Positives = 135/325 (41%), Gaps = 71/325 (21%)
Query: 325 SFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV---KAQNCEALFDLLSE 381
+ + +S I Y+ G +E ARR FD + +K +V W ++ +GY + + LFD + E
Sbjct: 16 AIAYNSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPE 75
Query: 382 --FVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
V+ G+++ + ++ P + + ++ + +V Y +
Sbjct: 76 RNTVSWNGLIS-GYVKNRMVSEARKAFDTMPERNVVSW-------------TAMVRGYVQ 121
Query: 440 CGNMTYAEIIFQNFIERDLVLYNV-------------------------------MIACY 468
G ++ AE +F E+++V + V MI+ Y
Sbjct: 122 EGLVSEAETLFWQMPEKNVVSWTVMLGGLIQVRRIDEARGLFDIMPVKDVVARTNMISGY 181
Query: 469 AHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE 528
G +A LF+EM + + +++ ++S + G V++ K F M ++S
Sbjct: 182 CQEGRLAEARELFDEMPRRNV----ISWTTMISGYVQNGQVDVARKLFEVMPEKNEVS-- 235
Query: 529 TDHYACMIDLYGRANQLEKAIEFMKSIPTEE----DAVILGSFLNVCRLNRNAELAGEAE 584
+ M+ Y + ++E+A E ++P + +A+ILG +N E+A +A
Sbjct: 236 ---WTAMLMGYTQGGRIEEASELFDAMPVKAVVACNAMILG-------FGQNGEVA-KAR 284
Query: 585 EKLLRLEGNNKARYVQLANVYAAEG 609
+ ++ + + + VY +G
Sbjct: 285 QVFDQIREKDDGTWSAMIKVYERKG 309
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + +K+ + LI +Y K L ++R++FD +++ WN+II+ + +
Sbjct: 353 HAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLV 412
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEA---DALKLFIEMQS 116
++A +F + T G ++A Y + L++F M+S
Sbjct: 413 EEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKS 459
>gi|225450537|ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570 [Vitis vinifera]
Length = 607
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 194/612 (31%), Positives = 310/612 (50%), Gaps = 70/612 (11%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
T+I + + +AR+LFD P +D+V + M+ GY + + A +F EM +E
Sbjct: 47 TTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNH-THAWMVFCEMM--NE 103
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKC-RCYEE 178
+ + FT++S L C + + +GR +H +K D + ++L+DMY+ C ++
Sbjct: 104 ELDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDD 163
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
AC VF G L + VSW TLI+GY
Sbjct: 164 ACMVFRGI---------------------------------HLKNEVSWTTLIAGYTHRD 190
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
D GL++F +M V N +F+ A+ AC + + +++H+ V K+G SN V +
Sbjct: 191 DGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAAVTKHGFESNLPVMN 250
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
I+D+YC+C + FS EA R+F + +++++
Sbjct: 251 SILDMYCRC----------------SCFS---------------EANRYFYEMNQRDLIT 279
Query: 359 WTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
W L +GY ++ E+L+ + + EG + ++ ACA A L+ G++IH I
Sbjct: 280 WNTLIAGYERSNPTESLY--VFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRI 337
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
+R G+ + L + L+DMYSKCGN+ + +F RDLV + M+ Y HG+ E+A+
Sbjct: 338 IRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAV 397
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
LF++M+ GI+PD V F+AILSA H G V+ G +YF M DY ISP+ + Y C++DL
Sbjct: 398 ELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDL 457
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARY 598
GRA ++E+A E ++S+P + D + G FL C+ + L A ++L L + Y
Sbjct: 458 LGRAGKVEEAYELIESMPFKPDECVWGPFLGACKAHTFPNLGKLAAHRILDLRPHMAGTY 517
Query: 599 VQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
V L+N+YAA+G W E R+RK M+ M + G SWV V + ++ F VGD K IY
Sbjct: 518 VMLSNIYAADGKWGEFARLRKLMKRMGNKKETGRSWVEVGNHVYSFVVGDEVGSKIEGIY 577
Query: 659 SVLAIFTGELYE 670
VL G + E
Sbjct: 578 QVLENLIGHMKE 589
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 37/217 (17%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
E N+ N+I+ + +A F +DL+T+N+++ GY + E+ L +F
Sbjct: 243 ESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAGYERSNPTES--LYVFS 300
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
M+S E + FT TS + C L + G+Q+H +++ D + ++LIDMYSK
Sbjct: 301 MMES--EGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSK 358
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C ++ +VF G + D VSW ++
Sbjct: 359 CGNIADSHQVFGGMSRR---------------------------------DLVSWTAMMI 385
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
GY +G EE ++LF +M +G+R + F + LSAC
Sbjct: 386 GYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAILSAC 422
Score = 45.8 bits (107), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%)
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
L +TL+ Y G + A +F ERD+V + VMIA Y + A ++F EM+ +
Sbjct: 45 LATTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMNEE 104
Query: 489 IKPDAVTFVAILSA 502
+ P+A T ++L A
Sbjct: 105 LDPNAFTISSVLKA 118
>gi|255558480|ref|XP_002520265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540484|gb|EEF42051.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 681
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 206/658 (31%), Positives = 344/658 (52%), Gaps = 42/658 (6%)
Query: 13 HVQAIKAGLTLTTIT-TNQLIHIYSK--------HNLLRE-------------------- 43
H+ +K GL T++ N+L+ +Y++ HNL E
Sbjct: 28 HLLFLKKGLINATVSLANRLLQMYARCGGTMTDAHNLFDEMPERNCFSWNTMIEGYMRVG 87
Query: 44 ----SRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYIN 99
S KLFD MP++N +SWN +IS K+ +L A+ LF+ P ++ V +NSM+ GY
Sbjct: 88 DKERSLKLFDLMPQKNDYSWNVVISGFAKAGELDVAKKLFNEMPRRNGVAWNSMIHGYAR 147
Query: 100 AEGYEADALKLFIEMQSAD-EHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDA 158
G+ +A+ LF E+ S E D F + S + C L + +G+Q+HA ++ +
Sbjct: 148 -NGFAREAVGLFKELNSNPLEKSCGDTFVLASVIGACADLGAIEYGKQVHARILMDDVEL 206
Query: 159 SGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQ 218
+SSLI++Y+KC + A V + +EV+ S +A++ G M A++ F R
Sbjct: 207 DSVLISSLINLYAKCGHLDTANYVLK-MMDEVDDFSLSALIMGYANCGRMSDAVRIF-RT 264
Query: 219 PELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCA 278
V WN+LISGYV N + + L M N V+ + T LSAC N + A
Sbjct: 265 KSNPCFVVWNSLISGYVNNHEEMKAFALVNEMKNNRVQVDSSTITVILSACSSTGNAQYA 324
Query: 279 KEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQ 338
K++H +V K GLI + V+S +D Y KC N N A + ++ ++SMI Y
Sbjct: 325 KQMHGYVCKVGLIDSVIVASAFIDAYSKCRNPNDACKLFSELKAYDTVLLNSMITAYCNC 384
Query: 339 GNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEAL--FDLLSEFVTKEGVVTDALILV 396
G + +A+ F+++ K+++ W ++ G AQN L D+ + + K + D L
Sbjct: 385 GRIRDAKNIFETMPSKSLISWNSIIVGL--AQNAYPLEALDVFGK-MNKLDLRMDRFSLA 441
Query: 397 ILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER 456
++ ACA ++L G+++ A + G++ D+ + ++LVD Y KCG + +F + I+
Sbjct: 442 SVISACACISSLELGEQVFARAIITGLESDQAVSTSLVDFYCKCGFIENGRKLFDSMIKT 501
Query: 457 DLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYF 516
D V +N M+ YA +G+ + + LF EM + G++P +TF +LSA HCG VE G K+F
Sbjct: 502 DEVSWNSMLMGYATNGYGLETLTLFNEMKQAGLRPTDITFTGVLSACDHCGLVEEGRKWF 561
Query: 517 NSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRN 576
N M DY I P +HY+CM+DL+ RA L++A+ ++ +P E D + S L C + +
Sbjct: 562 NIMKYDYHIDPGIEHYSCMVDLFARAGCLKEALNLVEHMPFEADCSMWSSVLRGCVAHGD 621
Query: 577 AELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSW 634
+L + +++++L + + YVQL+ ++A G+W +RK M + + G SW
Sbjct: 622 KDLGKKVAQQIIQLNPESSSAYVQLSGIFATSGDWESSALVRKIMTEKQVKKHPGFSW 679
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 131/303 (43%), Gaps = 66/303 (21%)
Query: 278 AKEIHSWVLKNGLISNPF-VSSGIVDVYCKCE-NMNYAESMLLLKGVRNSFSISSMIVGY 335
K++H LK GLI+ +++ ++ +Y +C M A ++ RN FS ++MI GY
Sbjct: 24 GKQLHLLFLKKGLINATVSLANRLLQMYARCGGTMTDAHNLFDEMPERNCFSWNTMIEGY 83
Query: 336 SLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVV------ 389
G+ E + + FD + +KN W + SG+ KA + L +E + GV
Sbjct: 84 MRVGDKERSLKLFDLMPQKNDYSWNVVISGFAKAGELDVAKKLFNEMPRRNGVAWNSMIH 143
Query: 390 ---------------------------TDALILVILLGACALQAALHPGKEIHAYILRMG 422
D +L ++GACA A+ GK++HA IL
Sbjct: 144 GYARNGFAREAVGLFKELNSNPLEKSCGDTFVLASVIGACADLGAIEYGKQVHARILMDD 203
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD------------------------- 457
V++D LIS+L+++Y+KCG++ A + + E D
Sbjct: 204 VELDSVLISSLINLYAKCGHLDTANYVLKMMDEVDDFSLSALIMGYANCGRMSDAVRIFR 263
Query: 458 ------LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEM 511
V++N +I+ Y ++ E KA L EM ++ D+ T ILSA G+ +
Sbjct: 264 TKSNPCFVVWNSLISGYVNNHEEMKAFALVNEMKNNRVQVDSSTITVILSACSSTGNAQY 323
Query: 512 GEK 514
++
Sbjct: 324 AKQ 326
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 17/185 (9%)
Query: 395 LVILLGACALQAALHPGKEIHAYILRMG-VQMDKKLISTLVDMYSKC-GNMTYAEIIFQN 452
L LL + +++H GK++H L+ G + L + L+ MY++C G MT A +F
Sbjct: 8 LARLLQSLNTHSSIHQGKQLHLLFLKKGLINATVSLANRLLQMYARCGGTMTDAHNLFDE 67
Query: 453 FIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMG 512
ER+ +N MI Y G +E+++ LF+ M +K + ++ ++S F G +++
Sbjct: 68 MPERNCFSWNTMIEGYMRVGDKERSLKLFDLMPQK----NDYSWNVVISGFAKAGELDVA 123
Query: 513 EKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSI---PTEE---DAVILGS 566
+K FN M ++ + MI Y R +A+ K + P E+ D +L S
Sbjct: 124 KKLFNEMPRRNGVA-----WNSMIHGYARNGFAREAVGLFKELNSNPLEKSCGDTFVLAS 178
Query: 567 FLNVC 571
+ C
Sbjct: 179 VIGAC 183
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 210/627 (33%), Positives = 324/627 (51%), Gaps = 54/627 (8%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHK---DLVTYNSMLCGYINAEGYEADALKLF 111
NVF N ++S K L+ A ++FD H+ DLV++NS++ Y+ A AL LF
Sbjct: 293 NVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANT-ALALF 351
Query: 112 IEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYS 171
+M + + D ++ + L C L GRQ+H F +++ F ++++DMY+
Sbjct: 352 HKM-TTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYA 410
Query: 172 KCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN---DAVSWN 228
KC EEA +VF+ + +++S NAMV + G +E AL F R E N D V+W
Sbjct: 411 KCGKMEEANKVFQRMKFK-DVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWT 469
Query: 229 TLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKN 288
+I+GY Q G E L +F +M + G R N T S LSAC + + KE H + +K
Sbjct: 470 AVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKF 529
Query: 289 GL-ISNP-------FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGN 340
L + P V +G++D+Y KC+ +
Sbjct: 530 ILNLDGPDPGADDLKVINGLIDMYAKCQ-------------------------------S 558
Query: 341 MEEARRHFDSLTEK--NVVVWTALFSGYVKAQNCEALFDLLSE-FVTKEGVVTDALILVI 397
E AR+ FDS++ K +VV WT + GY + + L S F + + + L
Sbjct: 559 TEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSC 618
Query: 398 LLGACALQAALHPGKEIHAYILR--MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIE 455
L ACA AAL G+++HAY+LR G M + + L+DMYSK G++ A+I+F N +
Sbjct: 619 ALVACARLAALRFGRQVHAYVLRNFYGSVM-LFVANCLIDMYSKSGDVDTAQIVFDNMPQ 677
Query: 456 RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKY 515
R+ V + ++ Y HG E A+ +F+EM + + PD +TF+ +L A H G V+ G +
Sbjct: 678 RNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINF 737
Query: 516 FNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNR 575
FN M+ D+ + P +HYACM+DL+GRA +L +A++ + +P E V+ + L+ CRL+
Sbjct: 738 FNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHS 797
Query: 576 NAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWV 635
N EL A +LL LE N Y L+N+YA W ++ RIR M+ + GCSW+
Sbjct: 798 NVELGEFAANRLLELESGNDGSYTLLSNIYANARRWKDVARIRYTMKRTGIKKRPGCSWI 857
Query: 636 YVEHEIHIFTVGDVSHPKTNAIYSVLA 662
+ F VGD SHP++ IY LA
Sbjct: 858 QGRKGVATFYVGDRSHPQSQQIYETLA 884
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 159/587 (27%), Positives = 260/587 (44%), Gaps = 93/587 (15%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPER--NVFSWNTI 62
+L A + H Q+I GL L + TN LI Y N + L + +P +VF WN +
Sbjct: 173 SLAHAKLLHQQSIMQGL-LFHLATN-LIGTYIASNSTAYAILLLERLPPSPSSVFWWNQL 230
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
I R+L SP D L+ +M+S
Sbjct: 231 IR-----------RALHLGSPR---------------------DVFTLYRQMKSLG--WT 256
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
D +T C L ++ G LHA + ++ ++ F ++++ MY KC A +
Sbjct: 257 PDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNM 316
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
F+ C G + D VSWN+++S Y+ DA
Sbjct: 317 FDD----------------LCHRG--------------IQDLVSWNSVVSAYMWASDANT 346
Query: 243 GLKLFVRMGENGVRWNEH-TFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
L LF +M + + + + L AC L +++H + +++GL+ + FV + +V
Sbjct: 347 ALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVV 406
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKN----VV 357
D+Y KC M A + ++ S ++M+ GYS G +E A F+ +TE+N VV
Sbjct: 407 DMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVV 466
Query: 358 VWTALFSGYV-KAQNCEAL--FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
WTA+ +GY + Q CEAL F + + ++ VVT LV LL AC AL GKE
Sbjct: 467 TWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVT----LVSLLSACVSVGALLHGKET 522
Query: 415 HAYILRMGVQMDK--------KLISTLVDMYSKCGNMTYAEIIFQNFI--ERDLVLYNVM 464
H Y ++ + +D K+I+ L+DMY+KC + A +F + +RD+V + VM
Sbjct: 523 HCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVM 582
Query: 465 IACYAHHGHEEKAILLFEEM--LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTAD 522
I YA HG A+ LF M ++K IKP+ T L A ++ G + + +
Sbjct: 583 IGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRN 642
Query: 523 YKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLN 569
+ S C+ID+Y ++ ++ A ++P + +AV S +
Sbjct: 643 FYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMP-QRNAVSWTSLMT 688
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 128/522 (24%), Positives = 231/522 (44%), Gaps = 126/522 (24%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +I++GL N ++ +Y+K + E+ K+F M ++V SWN +++ ++ L
Sbjct: 387 HGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRL 446
Query: 73 KQARSLFDSSPHK----DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
+ A SLF+ + D+VT+ +++ GY G +AL +F +M D R + T+
Sbjct: 447 EHALSLFERMTEENIELDVVTWTAVITGYAQ-RGQGCEALDVFRQM--CDCGSRPNVVTL 503
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGF--------AVSSLIDMYSKCRCYEEAC 180
S L+ CV + + G++ H + +K + G ++ LIDMY+KC+ E A
Sbjct: 504 VSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVAR 563
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
++F+ + P+ D V+W +I GY Q+GDA
Sbjct: 564 KMFDSVS-------------------------------PKDRDVVTWTVMIGGYAQHGDA 592
Query: 241 EEGLKLFVRM--GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS-NPFVS 297
L+LF M + ++ N+ T + AL AC L ++ +++H++VL+N S FV+
Sbjct: 593 NNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVA 652
Query: 298 SGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVV 357
+ ++D+Y K +++ A+ + RN+ S +S++ GY + G E+A R FD +
Sbjct: 653 NCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEM------ 706
Query: 358 VWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHA- 416
K +V D + +++L AC+ H G H
Sbjct: 707 --------------------------RKVPLVPDGITFLVVLYACS-----HSGMVDHGI 735
Query: 417 -YILRM----GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
+ RM GV + + +VD++ + G +
Sbjct: 736 NFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLG--------------------------- 768
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
+A+ L EM ++P V +VA+LSA R +VE+GE
Sbjct: 769 ----EAMKLINEM---PMEPTPVVWVALLSACRLHSNVELGE 803
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 201/600 (33%), Positives = 317/600 (52%), Gaps = 55/600 (9%)
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
+ C++ +L+ AR LFD P +D+V++N+ML GY GY +A ++F EM +
Sbjct: 37 LRGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQ-NGYVKEAKEIFDEMPCKNS--- 92
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
+ + ++ Y + E+A R+
Sbjct: 93 --------------------------------------ISWNGMLAAYVQNGRIEDARRL 114
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
FE + LIS N M+ + + A F R PE D VSWNT+ISGY QNG+ E
Sbjct: 115 FE-SKADWELISWNCMMGGYVKRNRLVDARGIFDRMPE-RDEVSWNTMISGYAQNGELLE 172
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVS-SGIV 301
+LF E+ VR + T+ + +S + A+ + +G+ VS + I+
Sbjct: 173 AQRLFE---ESPVR-DVFTWTAMVSGYVQNGMLDEARRVF-----DGMPEKNSVSWNAII 223
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
Y +C+ M+ A + +N S ++MI GY+ G++ +AR FD + +++ + W A
Sbjct: 224 AGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAA 283
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+ +GY ++ E L E + ++G + L CA AAL GK++H +++
Sbjct: 284 IIAGYAQSGYGEEALHLFVE-MKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKA 342
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
G++ + + L+ MY KCGN+ A I+F+ E+++V +N MIA YA HG ++A++LF
Sbjct: 343 GLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLF 402
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGR 541
E M + GI PD VT V +LSA H G V+ G +YF SMT DY I+ + HY CMIDL GR
Sbjct: 403 ESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGR 462
Query: 542 ANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQL 601
A +L+ A MK++P E DA G+ L R++ N EL +A + + +E +N YV L
Sbjct: 463 AGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLL 522
Query: 602 ANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+N+YAA G W ++GR+R +MR + G SWV V+++IH FTVGD HP+ + IY+ L
Sbjct: 523 SNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFL 582
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 128/484 (26%), Positives = 237/484 (48%), Gaps = 59/484 (12%)
Query: 25 TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPH 84
+I+ N ++ Y ++ + ++R+LF+ + + SWN ++ +K + L AR +FD P
Sbjct: 92 SISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPE 151
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
+D V++N+M+ GY G +A +LF +E D FT T+ ++ V+ +
Sbjct: 152 RDEVSWNTMISGYAQ-NGELLEAQRLF------EESPVRDVFTWTAMVSGYVQNGMLDEA 204
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
R++ M + ++ + +++I Y +C+ ++A +FE + N+ S N M+ +
Sbjct: 205 RRVFDGMPEKNS----VSWNAIIAGYVQCKRMDQARELFEAMPCQ-NVSSWNTMITGYAQ 259
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFAS 264
G++ A F R P+ D++SW +I+GY Q+G EE L LFV M +G R N TF S
Sbjct: 260 NGDIAQARNFFDRMPQ-RDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTS 318
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
LS C + ++ K++H V+K GL S +V + ++ +YCKC
Sbjct: 319 TLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKC----------------- 361
Query: 325 SFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK-AQNCEALFDLLSEFV 383
GN+++A F+ + EK VV W + +GY + EAL +L E +
Sbjct: 362 --------------GNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEAL--MLFESM 405
Query: 384 TKEGVVTDALILVILLGACALQAALHPGKE-IHAYILRMGVQMDKKLISTLVDMYSKCGN 442
K G++ D + +V +L AC+ + G E ++ G+ + K + ++D+ + G
Sbjct: 406 KKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGR 465
Query: 443 MTYAEIIFQNF-IERDLVLYNVMIACYAHHGH----EEKAILLFEEMLEKGIKPDAVTFV 497
+ A+ + +N E D + ++ HG+ E+ A ++FE ++PD
Sbjct: 466 LDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFE------MEPDNSGMY 519
Query: 498 AILS 501
+LS
Sbjct: 520 VLLS 523
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + +KAGL N L+ +Y K + ++ +F+ + E+ V SWNT+I+ +
Sbjct: 336 HGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFG 395
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINA 100
K+A LF+S ++ + + G ++A
Sbjct: 396 KEALMLFESMKKTGILPDDVTMVGVLSA 423
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 219/683 (32%), Positives = 355/683 (51%), Gaps = 30/683 (4%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + +G T N+LI+IY K + + +RKLFD++P+ ++ + T++SA S ++
Sbjct: 28 HAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSSSGNV 87
Query: 73 KQARSLFDSSPH--KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
K A+ LF+++P +D V+YN+M+ Y + A AL LF++M+ D FT +S
Sbjct: 88 KLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHA-ALNLFVQMKRYG--FLPDPFTFSS 144
Query: 131 TLN-LCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKC---------RCYEEAC 180
L+ L + + LH ++K ++L+ Y C + A
Sbjct: 145 VLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASAR 204
Query: 181 RVF-EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
+VF E ++ S M+A R ++ +A + V+WN +ISGYV+ G
Sbjct: 205 KVFDETPKNQIYEPSWTTMIAGYVRNDDL-VAARELLDGLTYPIDVAWNAMISGYVRRGL 263
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSAC------CGLRNVKCAKEIHSWVLKNGL-IS 292
EE F RM G++ +E+T+ S +SAC G+ N C +++H ++L+ + S
Sbjct: 264 YEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFN--CGRQVHGYILRTVVEPS 321
Query: 293 NPFVSS---GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFD 349
+ FV S ++ Y K + M A + VR+ S ++++ GY +EEA F
Sbjct: 322 HHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFS 381
Query: 350 SLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALH 409
+ E+NV+ WT + SG + E L ++ + EG+ + AC++ +L
Sbjct: 382 EMPERNVLTWTVMISGLAQNGFGEEGLKLFNQ-MKSEGLEPCDYAFAGAITACSVLGSLD 440
Query: 410 PGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYA 469
G++IH+ ++R+G + L+ MYS+CG + AE +F D V +N MIA A
Sbjct: 441 NGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALA 500
Query: 470 HHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPET 529
HGH KAI LFE+M+++ I PD +TF+ IL+A H G ++ G YF++M Y I+P
Sbjct: 501 QHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGE 560
Query: 530 DHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLR 589
DHYA +IDL RA KA +KS+P E A I + L CR++ N EL +A ++LL
Sbjct: 561 DHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRLLE 620
Query: 590 LEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDV 649
L Y+ L+N+YAA G W E+ R+R MR + GCSWV VE+ +H+F V D
Sbjct: 621 LIPGQDGTYIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEVENMVHVFLVDDA 680
Query: 650 SHPKTNAIYSVLAIFTGELYEIA 672
HP+ A+Y+ L E+ ++
Sbjct: 681 RHPEVQAVYTYLQQLVNEMKKLG 703
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 185/401 (46%), Gaps = 27/401 (6%)
Query: 143 FGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAAC 202
R +HA ++ + + F ++ LI++Y K A ++F+ + +++++ +++A
Sbjct: 23 IARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKP-DIVARTTLLSAY 81
Query: 203 CREGEMEMALKTFWRQP-ELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHT 261
G +++A + F P + D VS+N +I+ Y D L LFV+M G + T
Sbjct: 82 SSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFT 141
Query: 262 FASALSACCGLRN-VKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLK 320
F+S LSA + + + + +H V+K G + P V++ ++ Y C + +S L+
Sbjct: 142 FSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMA 201
Query: 321 GVRNSF-----------SISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
R F S ++MI GY ++ AR D LT V W A+ SGYV+
Sbjct: 202 SARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRR 261
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACA----LQAALHPGKEIHAYILRMGVQM 425
E FD + G+ D L+ AC + G+++H YILR V+
Sbjct: 262 GLYEEAFDTFRRMHSM-GIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEP 320
Query: 426 DKKLI----STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
+ + L+ Y+K M A +F RD++ +N +++ Y + E+A +F
Sbjct: 321 SHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIF 380
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTAD 522
EM E+ + +T+ ++S G E G K FN M ++
Sbjct: 381 SEMPERNV----LTWTVMISGLAQNGFGEEGLKLFNQMKSE 417
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/368 (19%), Positives = 151/368 (41%), Gaps = 64/368 (17%)
Query: 278 AKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSL 337
A+ +H+ +L +G N F+ + ++++YCK N+ YA + + + ++++ YS
Sbjct: 24 ARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSS 83
Query: 338 QGNMEEARRHFDS--LTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALIL 395
GN++ A++ F++ LT ++ V + A+ + Y + A +L + + + G + D
Sbjct: 84 SGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQ-MKRYGFLPDPFTF 142
Query: 396 VILLGACALQAALHPG-KEIHAYILRMGVQMDKKLISTLVDMYSKCGN---------MTY 445
+L A +L A + +H ++++G + + + L+ Y C + M
Sbjct: 143 SSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMAS 202
Query: 446 AEIIFQNFIERDL---------------------------------VLYNVMIACYAHHG 472
A +F + + V +N MI+ Y G
Sbjct: 203 ARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRG 262
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADY----KISPE 528
E+A F M GI+ D T+ +++SA CGS FN + + E
Sbjct: 263 LYEEAFDTFRRMHSMGIQEDEYTYTSLISA---CGSCNEKMGMFNCGRQVHGYILRTVVE 319
Query: 529 TDHY------ACMIDLYGRANQLEKAIEFMKSIPTEE----DAVILGSFLNVCRLNRNAE 578
H+ +I Y + +++ +A +P + +AV+ G ++N R+
Sbjct: 320 PSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSG-YVNAQRIEEANS 378
Query: 579 LAGEAEEK 586
+ E E+
Sbjct: 379 IFSEMPER 386
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 194/609 (31%), Positives = 311/609 (51%), Gaps = 41/609 (6%)
Query: 69 SHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
S DL++AR LFD P DL T+ ++L + G +A++ + + + + + D+ +
Sbjct: 24 SGDLQRARHLFDKIPQPDLPTW-TILISALTKHGRSLEAIQYYNDFRHKN-CVEPDKLLL 81
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE 188
S C L +V +++H ++ + ++LIDMY KCRC E A VFEG
Sbjct: 82 LSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEGMP- 140
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
D +SW ++ S YV G E L F
Sbjct: 141 --------------------------------FRDVISWTSMASCYVNCGLLREALGAFR 168
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
+MG NG R N T +S L AC L+++K +E+H +V++NG+ N FVSS +V++Y C
Sbjct: 169 KMGLNGERPNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCL 228
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK----NVVVWTALFS 364
++ A+ + R++ S + +I Y L E+ F + + N W A+
Sbjct: 229 SIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIG 288
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
G ++ E ++LS + G + + + +L AC +L GK+IH YI R
Sbjct: 289 GCMQNGRTEKALEVLSR-MQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFF 347
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
D + LV MY+KCG++ + +F +RD V +N MI + HG+ E+A+LLF EM
Sbjct: 348 QDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREM 407
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
++ G++P++VTF +LS H V+ G F+SM+ D+ + P+ DH++CM+D+ RA +
Sbjct: 408 VDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGR 467
Query: 545 LEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANV 604
LE+A EF+K +P E A G+ L CR+ +N EL A +L +E +N YV L+N+
Sbjct: 468 LEEAYEFIKKMPIEPTAGAWGALLGGCRVYKNVELGRIAANRLFEIESDNPGNYVLLSNI 527
Query: 605 YAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIF 664
+ W+E RK MR + GCSW+ V + +H F VGD S+ +++ IY L +
Sbjct: 528 LVSAKLWSEASETRKLMRDRGVTKNPGCSWIQVRNRVHTFVVGDKSNDQSDEIYRFLD-Y 586
Query: 665 TGELYEIAG 673
GE IAG
Sbjct: 587 MGEKMRIAG 595
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 163/319 (51%), Gaps = 13/319 (4%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
+V N +I K + AR +F+ P +D++++ SM Y+N G +AL F +M
Sbjct: 112 DVLLGNALIDMYGKCRCSEGARLVFEGMPFRDVISWTSMASCYVNC-GLLREALGAFRKM 170
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
E R + TV+S L C L ++ GR++H F+V+ + F S+L++MY+ C
Sbjct: 171 GLNGE--RPNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCL 228
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPE----LNDAVSWNTL 230
+A VF+ + + +S N ++ A E E L F R LN A SWN +
Sbjct: 229 SIRQAQLVFDSMSRR-DTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYA-SWNAV 286
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL 290
I G +QNG E+ L++ RM +G + N+ T S L AC L +++ K+IH ++ ++
Sbjct: 287 IGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWF 346
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEA----RR 346
+ ++ +V +Y KC ++ + + + R++ S ++MI+ S+ GN EEA R
Sbjct: 347 FQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFRE 406
Query: 347 HFDSLTEKNVVVWTALFSG 365
DS N V +T + SG
Sbjct: 407 MVDSGVRPNSVTFTGVLSG 425
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 83/168 (49%)
Query: 335 YSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALI 394
YS G+++ AR FD + + ++ WT L S K ++F K V D L+
Sbjct: 21 YSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEPDKLL 80
Query: 395 LVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFI 454
L+ + ACA + K +H +R G D L + L+DMY KC A ++F+
Sbjct: 81 LLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEGMP 140
Query: 455 ERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
RD++ + M +CY + G +A+ F +M G +P++VT +IL A
Sbjct: 141 FRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPA 188
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 126/269 (46%), Gaps = 40/269 (14%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+LK H ++ G+ ++ L+++Y+ +R+++ +FD M R+ SWN +I+
Sbjct: 194 DLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLIT 253
Query: 65 ACIKSHDLKQARSLFDSSPHK----DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
A + + ++ S+F + + ++N+++ G + G AL++ MQ++
Sbjct: 254 AYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQ-NGRTEKALEVLSRMQNSG-- 310
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
+ ++ T+TS L C L ++ G+Q+H ++ + ++L+ MY+KC E +
Sbjct: 311 FKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSR 370
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
RVF ++++K V+ WNT+I +G+
Sbjct: 371 RVF-------SMMTKRDTVS--------------------------WNTMIIATSMHGNG 397
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSAC 269
EE L LF M ++GVR N TF LS C
Sbjct: 398 EEALLLFREMVDSGVRPNSVTFTGVLSGC 426
Score = 42.4 bits (98), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 67/158 (42%), Gaps = 8/158 (5%)
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
++ + L + +YS G++ A +F + DL + ++I+ HG +AI
Sbjct: 4 KLPTSLPPHLALKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQ 63
Query: 480 LFEEMLEKG-IKPDAVTFVAILSAFRHCGSVE--MGEKYFNSMTADYKISPETDHYACMI 536
+ + K ++PD + +++ A C S+ M K + + + +I
Sbjct: 64 YYNDFRHKNCVEPDKLLLLSVAKA---CASLRDVMNAKRVHEDAIRFGFCSDVLLGNALI 120
Query: 537 DLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLN 574
D+YG+ E A + +P + VI + + C +N
Sbjct: 121 DMYGKCRCSEGARLVFEGMPFRD--VISWTSMASCYVN 156
>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
Length = 863
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 194/668 (29%), Positives = 341/668 (51%), Gaps = 79/668 (11%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
M+ L L + + A ++ ++ + T + +H ++ N R +
Sbjct: 241 MQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVV-----------GT 289
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
I+ K++ L AR F P+ + T N+M+ G + A G +A+ LF M +
Sbjct: 290 AIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRA-GLGIEAMGLFQFMIRSS-- 346
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
IR D +++ + C + G+Q+H +K+ D ++++D+Y KC+ EA
Sbjct: 347 IRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAY 406
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+F+G ++ D+VSWN +I+ QNG
Sbjct: 407 LIFQGMKQK---------------------------------DSVSWNAIIAALEQNGHY 433
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
++ + F M G++ ++ T+ S L AC LR+++ +H V+K+GL S+ FV+S +
Sbjct: 434 DDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTV 493
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
VD+YCKC G ++EA++ D + + VV W
Sbjct: 494 VDMYCKC-------------------------------GIIDEAQKLHDRIGGQQVVSWN 522
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
A+ SG+ + E SE + G+ D +L CA A + GK+IH I++
Sbjct: 523 AILSGFSLNKESEEAQKFFSEMLDM-GLKPDHFTFATVLDTCANLATIELGKQIHGQIIK 581
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
+ D+ + STLVDMY+KCG+M + ++F+ +RD V +N MI YA HG +A+ +
Sbjct: 582 QEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRM 641
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
FE M ++ + P+ TFVA+L A H G + G +YF+ MT YK+ P+ +H+ACM+D+ G
Sbjct: 642 FERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILG 701
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQ 600
R+ ++A++F+ S+P + DAVI + L++C++ ++ E+A A +L L+ ++ + Y+
Sbjct: 702 RSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYIL 761
Query: 601 LANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSV 660
L+NVYA G WA++ R R+ ++ + + GCSW+ V+ E+H F VGD +HP++ +Y +
Sbjct: 762 LSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEM 821
Query: 661 LAIFTGEL 668
L GE+
Sbjct: 822 LNDLIGEM 829
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 163/610 (26%), Positives = 280/610 (45%), Gaps = 79/610 (12%)
Query: 17 IKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQAR 76
+ +G T +N L+ +Y++ +R++FD MP R+ SWNT+++A + D+ A
Sbjct: 44 VVSGFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAV 103
Query: 77 SLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCV 136
+LFD P D+V++N+++ GY G +++ LF+EM A + D T L C
Sbjct: 104 ALFDGMPDPDVVSWNALVSGYCQ-RGMFQESVDLFVEM--ARRGVSPDRTTFAVLLKSCS 160
Query: 137 KLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKN 196
L + G Q+HA VKT + S+L+DMY KCR ++A F G E +N
Sbjct: 161 ALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPE------RN 214
Query: 197 AMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVR 256
W VSW I+G VQN GL+LF+ M G+
Sbjct: 215 -------------------W--------VSWGAAIAGCVQNEQYVRGLELFIEMQRLGLG 247
Query: 257 WNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESM 316
++ ++ASA +C + + +++H+ +KN S+ V + IVDVY K ++
Sbjct: 248 VSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLT----- 302
Query: 317 LLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ-NCEAL 375
+ARR F L V A+ G V+A EA+
Sbjct: 303 --------------------------DARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAM 336
Query: 376 FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVD 435
L +F+ + + D + L + ACA G+++H ++ G +D + + ++D
Sbjct: 337 G--LFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLD 394
Query: 436 MYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVT 495
+Y KC + A +IFQ ++D V +N +IA +GH + IL F EML G+KPD T
Sbjct: 395 LYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFT 454
Query: 496 FVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY--ACMIDLYGRANQLEKAIEFMK 553
+ ++L A S+E G + + K +D + + ++D+Y + +++A +
Sbjct: 455 YGSVLKACAALRSLEYGLMVHDKVI---KSGLGSDAFVASTVVDMYCKCGIIDEAQKLHD 511
Query: 554 SIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAE 613
I ++ V + L+ LN+ +E A + ++L + K + A V N A
Sbjct: 512 RIGGQQ-VVSWNAILSGFSLNKESEEAQKFFSEMLDM--GLKPDHFTFATVLDTCANLAT 568
Query: 614 MGRIRKQMRG 623
+ + KQ+ G
Sbjct: 569 I-ELGKQIHG 577
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 174/403 (43%), Gaps = 45/403 (11%)
Query: 151 MVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEM 210
MV + + F + L+ MY++C A RVF+ + +S N M+ A G++
Sbjct: 43 MVVSGFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRR-DTVSWNTMLTAYSHAGDIST 101
Query: 211 ALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACC 270
A+ F P+ D VSWN L+SGY Q G +E + LFV M GV + TFA L +C
Sbjct: 102 AVALFDGMPD-PDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCS 160
Query: 271 GLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISS 330
L + ++H+ +K GL + S +VD+Y KC +++
Sbjct: 161 ALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD------------------- 201
Query: 331 MIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVT 390
+A F + E+N V W A +G V+ + +L E + + G+
Sbjct: 202 ------------DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIE-MQRLGLGV 248
Query: 391 DALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIF 450
+CA + L+ G+++HA+ ++ D+ + + +VD+Y+K ++T A F
Sbjct: 249 SQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAF 308
Query: 451 QNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVE 510
+ N M+ G +A+ LF+ M+ I+ D V+ + SA C
Sbjct: 309 FGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSA---CAET- 364
Query: 511 MGEKYFNSMTAD-YKISPETDHYAC----MIDLYGRANQLEKA 548
+ YF I D C ++DLYG+ L +A
Sbjct: 365 --KGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEA 405
>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
Length = 863
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 194/668 (29%), Positives = 341/668 (51%), Gaps = 79/668 (11%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
M+ L L + + A ++ ++ + T + +H ++ N R +
Sbjct: 241 MQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVV-----------GT 289
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
I+ K++ L AR F P+ + T N+M+ G + A G +A+ LF M +
Sbjct: 290 AIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRA-GLGIEAMGLFQFMIRSS-- 346
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
IR D +++ + C + G+Q+H +K+ D ++++D+Y KC+ EA
Sbjct: 347 IRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAY 406
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+F+G ++ D+VSWN +I+ QNG
Sbjct: 407 LIFQGMKQK---------------------------------DSVSWNAIIAALEQNGHY 433
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
++ + F M G++ ++ T+ S L AC LR+++ +H V+K+GL S+ FV+S +
Sbjct: 434 DDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTV 493
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
VD+YCKC G ++EA++ D + + VV W
Sbjct: 494 VDMYCKC-------------------------------GIIDEAQKLHDRIGGQQVVSWN 522
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
A+ SG+ + E SE + G+ D +L CA A + GK+IH I++
Sbjct: 523 AILSGFSLNKESEEAQKFFSEMLDM-GLKPDHFTFATVLDTCANLATIELGKQIHGQIIK 581
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
+ D+ + STLVDMY+KCG+M + ++F+ +RD V +N MI YA HG +A+ +
Sbjct: 582 QEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRM 641
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
FE M ++ + P+ TFVA+L A H G + G +YF+ MT YK+ P+ +H+ACM+D+ G
Sbjct: 642 FERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILG 701
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQ 600
R+ ++A++F+ S+P + DAVI + L++C++ ++ E+A A +L L+ ++ + Y+
Sbjct: 702 RSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYIL 761
Query: 601 LANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSV 660
L+NVYA G WA++ R R+ ++ + + GCSW+ V+ E+H F VGD +HP++ +Y +
Sbjct: 762 LSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEM 821
Query: 661 LAIFTGEL 668
L GE+
Sbjct: 822 LNDLIGEM 829
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 162/610 (26%), Positives = 279/610 (45%), Gaps = 79/610 (12%)
Query: 17 IKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQAR 76
+ +G +N L+ +Y++ +R++FD MP R+ SWNT+++A + D+ A
Sbjct: 44 VVSGFVPNAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAV 103
Query: 77 SLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCV 136
+LFD P D+V++N+++ GY G +++ LF+EM A + D T L C
Sbjct: 104 ALFDGMPDPDVVSWNALVSGYCQ-RGMFQESVDLFVEM--ARRGVSPDRTTFAVLLKSCS 160
Query: 137 KLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKN 196
L + G Q+HA VKT + S+L+DMY KCR ++A F G E +N
Sbjct: 161 ALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPE------RN 214
Query: 197 AMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVR 256
W VSW I+G VQN GL+LF+ M G+
Sbjct: 215 -------------------W--------VSWGAAIAGCVQNEQYVRGLELFIEMQRLGLG 247
Query: 257 WNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESM 316
++ ++ASA +C + + +++H+ +KN S+ V + IVDVY K ++
Sbjct: 248 VSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLT----- 302
Query: 317 LLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ-NCEAL 375
+ARR F L V A+ G V+A EA+
Sbjct: 303 --------------------------DARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAM 336
Query: 376 FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVD 435
L +F+ + + D + L + ACA G+++H ++ G +D + + ++D
Sbjct: 337 G--LFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLD 394
Query: 436 MYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVT 495
+Y KC + A +IFQ ++D V +N +IA +GH + IL F EML G+KPD T
Sbjct: 395 LYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFT 454
Query: 496 FVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY--ACMIDLYGRANQLEKAIEFMK 553
+ ++L A S+E G + + K +D + + ++D+Y + +++A +
Sbjct: 455 YGSVLKACAALRSLEYGLMVHDKVI---KSGLGSDAFVASTVVDMYCKCGIIDEAQKLHD 511
Query: 554 SIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAE 613
I ++ V + L+ LN+ +E A + ++L + K + A V N A
Sbjct: 512 RIGGQQ-VVSWNAILSGFSLNKESEEAQKFFSEMLDM--GLKPDHFTFATVLDTCANLAT 568
Query: 614 MGRIRKQMRG 623
+ + KQ+ G
Sbjct: 569 I-ELGKQIHG 577
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 174/403 (43%), Gaps = 45/403 (11%)
Query: 151 MVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEM 210
MV + + F + L+ MY++C A RVF+ + +S N M+ A G++
Sbjct: 43 MVVSGFVPNAFVSNCLLQMYARCAGAACARRVFDAMPRR-DTVSWNTMLTAYSHAGDIST 101
Query: 211 ALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACC 270
A+ F P+ D VSWN L+SGY Q G +E + LFV M GV + TFA L +C
Sbjct: 102 AVALFDGMPD-PDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCS 160
Query: 271 GLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISS 330
L + ++H+ +K GL + S +VD+Y KC +++
Sbjct: 161 ALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD------------------- 201
Query: 331 MIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVT 390
+A F + E+N V W A +G V+ + +L E + + G+
Sbjct: 202 ------------DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIE-MQRLGLGV 248
Query: 391 DALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIF 450
+CA + L+ G+++HA+ ++ D+ + + +VD+Y+K ++T A F
Sbjct: 249 SQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAF 308
Query: 451 QNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVE 510
+ N M+ G +A+ LF+ M+ I+ D V+ + SA C
Sbjct: 309 FGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSA---CAET- 364
Query: 511 MGEKYFNSMTAD-YKISPETDHYAC----MIDLYGRANQLEKA 548
+ YF I D C ++DLYG+ L +A
Sbjct: 365 --KGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEA 405
>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 905
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 194/668 (29%), Positives = 341/668 (51%), Gaps = 79/668 (11%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
M+ L L + + A ++ ++ + T + +H ++ N R +
Sbjct: 283 MQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVV-----------GT 331
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
I+ K++ L AR F P+ + T N+M+ G + A G +A+ LF M +
Sbjct: 332 AIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRA-GLGIEAMGLFQFMIRSS-- 388
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
IR D +++ + C + G+Q+H +K+ D ++++D+Y KC+ EA
Sbjct: 389 IRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAY 448
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+F+G ++ D+VSWN +I+ QNG
Sbjct: 449 LIFQGMKQK---------------------------------DSVSWNAIIAALEQNGHY 475
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
++ + F M G++ ++ T+ S L AC LR+++ +H V+K+GL S+ FV+S +
Sbjct: 476 DDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTV 535
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
VD+YCKC G ++EA++ D + + VV W
Sbjct: 536 VDMYCKC-------------------------------GIIDEAQKLHDRIGGQQVVSWN 564
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
A+ SG+ + E SE + G+ D +L CA A + GK+IH I++
Sbjct: 565 AILSGFSLNKESEEAQKFFSEMLDM-GLKPDHFTFATVLDTCANLATIELGKQIHGQIIK 623
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
+ D+ + STLVDMY+KCG+M + ++F+ +RD V +N MI YA HG +A+ +
Sbjct: 624 QEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRM 683
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
FE M ++ + P+ TFVA+L A H G + G +YF+ MT YK+ P+ +H+ACM+D+ G
Sbjct: 684 FERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILG 743
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQ 600
R+ ++A++F+ S+P + DAVI + L++C++ ++ E+A A +L L+ ++ + Y+
Sbjct: 744 RSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYIL 803
Query: 601 LANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSV 660
L+NVYA G WA++ R R+ ++ + + GCSW+ V+ E+H F VGD +HP++ +Y +
Sbjct: 804 LSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEM 863
Query: 661 LAIFTGEL 668
L GE+
Sbjct: 864 LNDLIGEM 871
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 161/610 (26%), Positives = 278/610 (45%), Gaps = 79/610 (12%)
Query: 17 IKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQAR 76
+ +G T +N L+ +Y++ +R++FD MP R+ SWNT+++A + D+ A
Sbjct: 86 VVSGFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAV 145
Query: 77 SLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCV 136
+LFD P D+V++N+++ GY G +++ LF+EM A + D T L C
Sbjct: 146 ALFDGMPDPDVVSWNALVSGYCQ-RGMFQESVDLFVEM--ARRGVSPDRTTFAVLLKSCS 202
Query: 137 KLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKN 196
L + G Q+HA VKT + S+L+DMY KCR ++A F G E
Sbjct: 203 ALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPER------- 255
Query: 197 AMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVR 256
+ VSW I+G VQN GL+LF+ M G+
Sbjct: 256 --------------------------NWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLG 289
Query: 257 WNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESM 316
++ ++ASA +C + + +++H+ +KN S+ V + IVDVY K ++
Sbjct: 290 VSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLT----- 344
Query: 317 LLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ-NCEAL 375
+ARR F L V A+ G V+A EA+
Sbjct: 345 --------------------------DARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAM 378
Query: 376 FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVD 435
L +F+ + + D + L + ACA G+++H ++ G +D + + ++D
Sbjct: 379 G--LFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLD 436
Query: 436 MYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVT 495
+Y KC + A +IFQ ++D V +N +IA +GH + IL F EML G+KPD T
Sbjct: 437 LYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFT 496
Query: 496 FVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY--ACMIDLYGRANQLEKAIEFMK 553
+ ++L A S+E G + + K +D + + ++D+Y + +++A +
Sbjct: 497 YGSVLKACAALRSLEYGLMVHDKVI---KSGLGSDAFVASTVVDMYCKCGIIDEAQKLHD 553
Query: 554 SIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAE 613
I ++ V + L+ LN+ +E A + ++L + K + A V N A
Sbjct: 554 RIGGQQ-VVSWNAILSGFSLNKESEEAQKFFSEMLDM--GLKPDHFTFATVLDTCANLAT 610
Query: 614 MGRIRKQMRG 623
+ + KQ+ G
Sbjct: 611 I-ELGKQIHG 619
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 174/403 (43%), Gaps = 45/403 (11%)
Query: 151 MVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEM 210
MV + + F + L+ MY++C A RVF+ + +S N M+ A G++
Sbjct: 85 MVVSGFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRR-DTVSWNTMLTAYSHAGDIST 143
Query: 211 ALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACC 270
A+ F P+ D VSWN L+SGY Q G +E + LFV M GV + TFA L +C
Sbjct: 144 AVALFDGMPD-PDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCS 202
Query: 271 GLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISS 330
L + ++H+ +K GL + S +VD+Y KC +++
Sbjct: 203 ALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD------------------- 243
Query: 331 MIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVT 390
+A F + E+N V W A +G V+ + +L E + + G+
Sbjct: 244 ------------DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIE-MQRLGLGV 290
Query: 391 DALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIF 450
+CA + L+ G+++HA+ ++ D+ + + +VD+Y+K ++T A F
Sbjct: 291 SQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAF 350
Query: 451 QNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVE 510
+ N M+ G +A+ LF+ M+ I+ D V+ + SA C
Sbjct: 351 FGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSA---CAET- 406
Query: 511 MGEKYFNSMTAD-YKISPETDHYAC----MIDLYGRANQLEKA 548
+ YF I D C ++DLYG+ L +A
Sbjct: 407 --KGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEA 447
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 210/661 (31%), Positives = 320/661 (48%), Gaps = 100/661 (15%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
++ L+ H I AG T T TN L+++YSK L + KLFD MP+RN+ SW
Sbjct: 17 KTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTA 76
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSM-LCGYINAEGYEADALKLFIEMQSADEH 120
+IS ++ +A + T+ M +CG +
Sbjct: 77 MISGLSQNSKFSEA-----------IRTFCGMRICGEVPT-------------------- 105
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
+F +S + C L ++ G+Q+H +K + F S+L DMYSKC +AC
Sbjct: 106 ----QFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDAC 161
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+VFE EM K D VSW +I GY + G+
Sbjct: 162 KVFE------------------------EMPCK---------DEVSWTAMIDGYSKIGEF 188
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
EE L F +M + V ++H S L AC L+ K + +HS V+K G S+ FV + +
Sbjct: 189 EEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNAL 248
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
D+Y K +M A N F I S E R NVV +T
Sbjct: 249 TDMYSKAGDMESAS---------NVFGIDS------------ECR---------NVVSYT 278
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
L GYV+ + E + E + ++G+ + L+ ACA QAAL G ++HA +++
Sbjct: 279 CLIDGYVETEQIEKGLSVFVE-LRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMK 337
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
+ D + S LVDMY KCG + A F + + +N +++ + HG + AI +
Sbjct: 338 INFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKI 397
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
FE M+++G+KP+A+TF+++L+ H G VE G YF SM Y + P +HY+C+IDL G
Sbjct: 398 FERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLG 457
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQ 600
RA +L++A EF+ +P E +A SFL CR++ + E+ A EKL++LE N V
Sbjct: 458 RAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVL 517
Query: 601 LANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSV 660
L+N+YA E W ++ +R +MR + G SWV V ++ H+F D SHP+ +AIY
Sbjct: 518 LSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEK 577
Query: 661 L 661
L
Sbjct: 578 L 578
>gi|255574750|ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532320|gb|EEF34121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 602
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 176/553 (31%), Positives = 308/553 (55%), Gaps = 5/553 (0%)
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTS-NDASGFAVSSLIDMYSKCRCYEEA 179
IR+ T+ L C ++ G+ +H + T + F + LI+MYSKC Y A
Sbjct: 46 IRLPSKTLAYLLQQCANTKSLKLGKWVHLHLKVTGLKRPNTFLANHLINMYSKCGDYPSA 105
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
+VF+ + NL S N M++ + G+++ A K F + PE D VSWNT++ Y ++G
Sbjct: 106 YKVFDEMSTR-NLYSWNGMLSGYAKLGKIKPARKLFDKMPE-KDVVSWNTMVIAYAKSGF 163
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
+ L+ + + G+ +NE++FA L+ C ++ ++ +K+ H VL G +SN +SS
Sbjct: 164 CNDALRFYRELRRLGIGYNEYSFAGLLNICVKVKELELSKQAHGQVLVAGFLSNLVISSS 223
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
++D Y KC M A + +R+ + ++M+ GY+ G++E AR FD + EKN V W
Sbjct: 224 VLDAYAKCSEMGDARRLFDEMIIRDVLAWTTMVSGYAQWGDVEAARELFDLMPEKNPVAW 283
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
T+L +GY + +L ++ + + D L A A A+L+ GK+IH Y++
Sbjct: 284 TSLIAGYARHDLGHKALELFTKMMALN-IRPDQFTFSSCLCASASIASLNHGKQIHGYLI 342
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER-DLVLYNVMIACYAHHGHEEKAI 478
R ++ + ++S+L+DMYSKCG + ++F ++ D+VL+N +I+ A HG ++AI
Sbjct: 343 RTNIRPNTIVVSSLIDMYSKCGCLEVGRLVFDLMGDKWDVVLWNTIISSLAQHGRGQEAI 402
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
+F++M+ G+KPD +T + +L+A H G V+ G + + S+T+ + + P +HYAC+IDL
Sbjct: 403 QMFDDMVRLGMKPDRITLIVLLNACSHSGLVQEGLRLYESITSCHGVIPNQEHYACLIDL 462
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARY 598
GRA + + ++ +P + + I + L VCR++ N E E EK++ L+ + A Y
Sbjct: 463 LGRAGHFDTLMNQLEKMPCKPNDEIWNALLGVCRMHGNIEFGREVAEKIIELDPQSSAAY 522
Query: 599 VQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
V L++++AA G W + +R+ M + SW+ +E+++H FT D HP IY
Sbjct: 523 VLLSSIHAAVGRWELVENVRQLMNERHVRKDRAISWIEIENKVHSFTASDRLHPLKEVIY 582
Query: 659 SVLAIFTGELYEI 671
L G + E+
Sbjct: 583 LALKQLAGHMEEV 595
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 125/482 (25%), Positives = 239/482 (49%), Gaps = 42/482 (8%)
Query: 25 TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPH 84
T N LI++YSK + K+FDEM RN++SWN ++S K +K AR LFD P
Sbjct: 86 TFLANHLINMYSKCGDYPSAYKVFDEMSTRNLYSWNGMLSGYAKLGKIKPARKLFDKMPE 145
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
KD+V++N+M+ Y + G+ DAL+ + E++ I +E++ LN+CVK+ +
Sbjct: 146 KDVVSWNTMVIAYAKS-GFCNDALRFYRELRRLG--IGYNEYSFAGLLNICVKVKELELS 202
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
+Q H ++ ++ SS++D Y+KC +A R+F+ ++++ MV+ +
Sbjct: 203 KQAHGQVLVAGFLSNLVISSSVLDAYAKCSEMGDARRLFDEMIIR-DVLAWTTMVSGYAQ 261
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFAS 264
G++E A + F PE N V+W +LI+GY ++ + L+LF +M +R ++ TF+S
Sbjct: 262 WGDVEAARELFDLMPEKN-PVAWTSLIAGYARHDLGHKALELFTKMMALNIRPDQFTFSS 320
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
L A + ++ K+IH ++++ + N V S ++D+Y KC
Sbjct: 321 CLCASASIASLNHGKQIHGYLIRTNIRPNTIVVSSLIDMYSKC----------------- 363
Query: 325 SFSISSMIVGYSLQGNMEEARRHFDSLTEK-NVVVWTALFSGYVKAQNCEALFDLLSEFV 383
G +E R FD + +K +VV+W + S + + + + V
Sbjct: 364 --------------GCLEVGRLVFDLMGDKWDVVLWNTIISSLAQHGRGQEAIQMFDDMV 409
Query: 384 TKEGVVTDALILVILLGACALQAALHPGKEIHAYILR-MGVQMDKKLISTLVDMYSKCGN 442
+ G+ D + L++LL AC+ + G ++ I GV +++ + L+D+ + G+
Sbjct: 410 -RLGMKPDRITLIVLLNACSHSGLVQEGLRLYESITSCHGVIPNQEHYACLIDLLGRAGH 468
Query: 443 M-TYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
T + + + + ++N ++ HG+ E + E+++E + P + +LS
Sbjct: 469 FDTLMNQLEKMPCKPNDEIWNALLGVCRMHGNIEFGREVAEKIIE--LDPQSSAAYVLLS 526
Query: 502 AF 503
+
Sbjct: 527 SI 528
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 146/256 (57%), Gaps = 9/256 (3%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H Q + AG + ++ ++ Y+K + + ++R+LFDEM R+V +W T++S + D+
Sbjct: 206 HGQVLVAGFLSNLVISSSVLDAYAKCSEMGDARRLFDEMIIRDVLAWTTMVSGYAQWGDV 265
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAE-GYEADALKLFIEMQSADEHIRMDEFTVTST 131
+ AR LFD P K+ V + S++ GY + G++ AL+LF +M + + IR D+FT +S
Sbjct: 266 EAARELFDLMPEKNPVAWTSLIAGYARHDLGHK--ALELFTKMMALN--IRPDQFTFSSC 321
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L + ++ G+Q+H ++++T+ + VSSLIDMYSKC C E VF+ ++ +
Sbjct: 322 LCASASIASLNHGKQIHGYLIRTNIRPNTIVVSSLIDMYSKCGCLEVGRLVFDLMGDKWD 381
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELN---DAVSWNTLISGYVQNGDAEEGLKLFV 248
++ N ++++ + G + A++ F L D ++ L++ +G +EGL+L+
Sbjct: 382 VVLWNTIISSLAQHGRGQEAIQMFDDMVRLGMKPDRITLIVLLNACSHSGLVQEGLRLYE 441
Query: 249 RMGE-NGVRWNEHTFA 263
+ +GV N+ +A
Sbjct: 442 SITSCHGVIPNQEHYA 457
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 209/668 (31%), Positives = 331/668 (49%), Gaps = 114/668 (17%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
+RS+N E L H +K+G N L+ Y K++ + +RK+FDEM ER+V SWN
Sbjct: 208 LRSVNGGEQL--HGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWN 265
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
+II+ GY+ + G L +F++M +
Sbjct: 266 SIIN-------------------------------GYV-SNGLAEKGLSVFVQMLFSG-- 291
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
I +D T+ S C + GR +H F VK ++L+DMYSKC
Sbjct: 292 IEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKC------- 344
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
G+++ A K +R+ VS+ ++I+GY + G A
Sbjct: 345 -------------------------GDLDSA-KVVFREMSGRSVVSYTSMIAGYAREGLA 378
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
E +KLF M E G+ + +T + L+ C R + K +H W+ +N + + FVS+ +
Sbjct: 379 GEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNAL 438
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
+D+Y KC +M AE + F + K+++ W
Sbjct: 439 MDMYAKCGSMREAELV-------------------------------FSEMRVKDIISWN 467
Query: 361 ALFSGYVKAQNCEA-----LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIH 415
+ GY K NC A LF+LL + ++ D + +L ACA +A G+EIH
Sbjct: 468 TVIGGYSK--NCYANEALSLFNLL---LVEKRFSPDERTVACVLPACASLSAFDKGREIH 522
Query: 416 AYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEE 475
YI+R G D+ + ++LVDMY+KCG + A ++F + +DLV + VMIA Y HG +
Sbjct: 523 GYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGK 582
Query: 476 KAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACM 535
+AI LF +M + GI+PD ++FV++L A H G V+ G ++FN M + KI P +HYAC+
Sbjct: 583 EAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACI 642
Query: 536 IDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNK 595
+D+ R L KA F++++P DA I G+ L CR++ + +LA EK+ LE N
Sbjct: 643 VDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKVFELEPENT 702
Query: 596 ARYVQLANVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPK 653
YV +AN+YA W E+ R+RK++ RG++ N GCSW+ ++ ++IF GD S+P+
Sbjct: 703 GYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKN--PGCSWIEIKGRVNIFVAGDSSNPE 760
Query: 654 TNAIYSVL 661
T I + L
Sbjct: 761 TEKIEAFL 768
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 111/455 (24%), Positives = 201/455 (44%), Gaps = 86/455 (18%)
Query: 104 EADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV 163
E+ LK +++ +D T+ S L LC ++ G+++ F+ +GF +
Sbjct: 73 ESGNLKNAVKLLHVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFI-----RGNGFVL 127
Query: 164 SS-----LIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQ 218
S L MY+ C +EA RVF+ Q
Sbjct: 128 DSNLGSKLALMYTNCGDLKEASRVFD---------------------------------Q 154
Query: 219 PELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCA 278
++ A+ WN L++ ++GD + LF +M +GV + +TF+ + LR+V
Sbjct: 155 VKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGG 214
Query: 279 KEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQ 338
+++H ++LK+G G RNS +S++ Y
Sbjct: 215 EQLHGYILKSGF------------------------------GERNSVG-NSLVAFYLKN 243
Query: 339 GNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVIL 398
++ AR+ FD +TE++V+ W ++ +GYV E + + + G+ D +V +
Sbjct: 244 HRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLF-SGIEIDLATIVSV 302
Query: 399 LGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDL 458
CA + G+ +H + ++ + + +TL+DMYSKCG++ A+++F+ R +
Sbjct: 303 FAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSV 362
Query: 459 VLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYF-- 516
V Y MIA YA G +A+ LFEEM E+GI PD T A+L+ ++ G++
Sbjct: 363 VSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEW 422
Query: 517 ---NSMTADYKISPETDHYACMIDLYGRANQLEKA 548
N M D +S ++D+Y + + +A
Sbjct: 423 IKENDMGFDIFVSN------ALMDMYAKCGSMREA 451
>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 196/620 (31%), Positives = 315/620 (50%), Gaps = 73/620 (11%)
Query: 54 RNVFSWNTIISACI-----KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADAL 108
++ F++++II K + A +F++ P+ +YN+++ GY + AL
Sbjct: 267 KSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQD-QGLKAL 325
Query: 109 KLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLID 168
++F +Q ++ DE +++ L C + G QLH VK + ++++D
Sbjct: 326 EIFQSLQRT--YLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTILD 383
Query: 169 MYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWN 228
MY KC EAC +F+ E DAVSWN
Sbjct: 384 MYGKCGALVEACTIFDDM---------------------------------ERRDAVSWN 410
Query: 229 TLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKN 288
+I+ + QN + + L LFV M + + ++ T+ S + AC G + + EIH ++K+
Sbjct: 411 AIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKS 470
Query: 289 GLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHF 348
G+ + FV S +VD+Y KC G + EA +
Sbjct: 471 GMGLDWFVGSALVDMYGKC-------------------------------GMLMEAEKIH 499
Query: 349 DSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAAL 408
D L EK V W ++ SG+ + E S+ + + GV+ D +L CA A +
Sbjct: 500 DRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQML-EMGVIPDNFTYATVLDVCANMATI 558
Query: 409 HPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACY 468
GK+IHA IL++ + D + STLVDMYSKCGNM + ++F+ +RD V ++ MI Y
Sbjct: 559 ELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAY 618
Query: 469 AHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE 528
A+HGH E+AI LFEEM +KP+ F+++L A H G V+ G YF M + Y + P
Sbjct: 619 AYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQIMQSHYGLDPH 678
Query: 529 TDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLL 588
+HY+CM+DL GR++Q+ +A++ ++S+ E D VI + L+ C++ N E+A +A LL
Sbjct: 679 MEHYSCMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLL 738
Query: 589 RLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGD 648
+L+ + + YV LANVYA G W E+ +IR M+ K + GCSW+ V E+H F VGD
Sbjct: 739 QLDPQDSSAYVLLANVYANVGMWGEVAKIRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGD 798
Query: 649 VSHPKTNAIYSVLAIFTGEL 668
+HP++ IY + E+
Sbjct: 799 KAHPRSEEIYEQTHLLVDEM 818
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 153/545 (28%), Positives = 253/545 (46%), Gaps = 87/545 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H Q I T N L+ Y K + + + K+FD MP R+V SWNT+I + ++
Sbjct: 29 HAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDRMPHRDVISWNTMIFGYAEIGNM 88
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
A+SLFD+ P +D+V++NS+L Y++ G ++++F+ M+S I D T + L
Sbjct: 89 GFAQSLFDTMPERDVVSWNSLLSCYLH-NGVNRKSIEIFVRMRSLK--IPHDYATFSVVL 145
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C + + G G Q+H ++ + S+L+DMYSKC+ + A R+F
Sbjct: 146 KACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIF--------- 196
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
RE PE N V W+ +I+GYVQN EGLKLF M +
Sbjct: 197 -----------RE------------MPERN-LVCWSAVIAGYVQNDRFIEGLKLFKDMLK 232
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G+ ++ T+AS +C GL K ++H LK+ + + + +D+Y KC+ M+
Sbjct: 233 VGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSD 292
Query: 313 AESML--LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
A + L R S+ +++IVGY+ Q +A F SL Q
Sbjct: 293 AWKVFNTLPNPPRQSY--NAIIVGYARQDQGLKALEIFQSL------------------Q 332
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
FD +S L L AC++ G ++H ++ G+ + +
Sbjct: 333 RTYLSFDEIS--------------LSGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVA 378
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEE--KAILLFEEMLEKG 488
+T++DMY KCG + A IF + RD V +N +IA AH +EE K + LF ML
Sbjct: 379 NTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIA--AHEQNEEIVKTLSLFVSMLRST 436
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYF-----NSMTADYKISPETDHYACMIDLYGRAN 543
++PD T+ +++ A ++ G + + M D+ + + ++D+YG+
Sbjct: 437 MEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVG------SALVDMYGKCG 490
Query: 544 QLEKA 548
L +A
Sbjct: 491 MLMEA 495
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 165/378 (43%), Gaps = 34/378 (8%)
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
+FT + L C L + G+Q HA M+ TS + + + L+ Y K A +VF+
Sbjct: 6 KFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFD 65
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
++IS N M+ G M A F PE D VSWN+L+S Y+ NG + +
Sbjct: 66 RMPHR-DVISWNTMIFGYAEIGNMGFAQSLFDTMPE-RDVVSWNSLLSCYLHNGVNRKSI 123
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
++FVRM + + TF+ L AC G+ + ++H ++ G ++ S +VD+Y
Sbjct: 124 EIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMY 183
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
KC+ ++ A R F + E+N+V W+A+ +
Sbjct: 184 SKCK-------------------------------KLDGAFRIFREMPERNLVCWSAVIA 212
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
GYV+ L + + K G+ + +CA +A G ++H + L+
Sbjct: 213 GYVQNDRFIEGLKLFKDML-KVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFA 271
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
D + + +DMY+KC M+ A +F YN +I YA KA+ +F+ +
Sbjct: 272 YDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSL 331
Query: 485 LEKGIKPDAVTFVAILSA 502
+ D ++ L+A
Sbjct: 332 QRTYLSFDEISLSGALTA 349
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 156/362 (43%), Gaps = 67/362 (18%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACI 67
E + H A+K GL N ++ +Y K L E+ +FD+M R+ SWN II+A
Sbjct: 358 EGIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHE 417
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFT 127
++ ++ L LF+ M + + D+FT
Sbjct: 418 QNEEI--------------------------------VKTLSLFVSMLRST--MEPDDFT 443
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
S + C + +G ++H +VK+ F S+L+DMY KC EA ++ +
Sbjct: 444 YGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLE 503
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
E+ + SWN++ISG+ +E + F
Sbjct: 504 EKTTV---------------------------------SWNSIISGFSSQKQSENAQRYF 530
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
+M E GV + T+A+ L C + ++ K+IH+ +LK L S+ +++S +VD+Y KC
Sbjct: 531 SQMLEMGVIPDNFTYATVLDVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDMYSKC 590
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
NM + M R+ + S+MI Y+ G+ E+A + F+ + NV +F +
Sbjct: 591 GNMQDSRLMFEKTPKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVL 650
Query: 368 KA 369
+A
Sbjct: 651 RA 652
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 154/315 (48%), Gaps = 18/315 (5%)
Query: 261 TFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLK 320
TF+ L C L+ + K+ H+ ++ + +V++ +V YCK NMNYA +
Sbjct: 8 TFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDRM 67
Query: 321 GVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLS 380
R+ S ++MI GY+ GNM A+ FD++ E++VV W +L S Y+ ++
Sbjct: 68 PHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFV 127
Query: 381 EFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC 440
+ + + D ++L AC+ G ++H ++MG + D S LVDMYSKC
Sbjct: 128 RMRSLK-IPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKC 186
Query: 441 GNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI- 499
+ A IF+ ER+LV ++ +IA Y + + + LF++ML+ G+ T+ ++
Sbjct: 187 KKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVF 246
Query: 500 -----LSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKS 554
LSAF+ G+ G + D I T +D+Y + +++ A + +
Sbjct: 247 RSCAGLSAFK-LGTQLHGHALKSDFAYDSIIGTAT------LDMYAKCDRMSDAWKVFNT 299
Query: 555 IPTEE----DAVILG 565
+P +A+I+G
Sbjct: 300 LPNPPRQSYNAIIVG 314
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 195/654 (29%), Positives = 326/654 (49%), Gaps = 99/654 (15%)
Query: 11 ICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSH 70
+ H A+K GL + + L+ +Y+K+ + E R++F EM
Sbjct: 137 LLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEM------------------- 177
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
P +++V++ +++ G + A GY +AL F EM + + D +T
Sbjct: 178 ------------PMRNVVSWTAIITGLVRA-GYNKEALVYFSEMWRS--RVEYDSYTFAI 222
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L C + +GR++HA +K D S F ++L MY+KC
Sbjct: 223 ALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKC----------------- 265
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
G++E L T + + + D VSW T+I+ VQ G E ++ F+RM
Sbjct: 266 ---------------GKLEYGL-TLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRM 309
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
E+ V NE+TFA+ +S C L ++ +++H+ +L GL ++ V + I+ +Y KC +
Sbjct: 310 RESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQL 369
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
SS ++ F +T +++V W+ + +GY +
Sbjct: 370 T-----------------SSSVI--------------FHEMTRRDIVSWSTIIAGYSQGG 398
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
+ F+LLS ++ EG L +L AC A L GK++HAY+L +G++ ++
Sbjct: 399 HVSEAFELLS-WMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVL 457
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
S L++MY KCG++ A IF D+V + MI YA HG+ + I LFE++ G++
Sbjct: 458 SALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLR 517
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
PD+VTF+ +LSA H G V++G +YFN+M+ Y+ISP +HY CMIDL RA +L A
Sbjct: 518 PDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEH 577
Query: 551 FMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGN 610
++++P D V+ + L CR++ + E E++L+LE N ++ LAN+YA++G
Sbjct: 578 MIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGK 637
Query: 611 WAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIF 664
W E IRK M+ + G SW+ V+ + F GD SHP+ IY++L +
Sbjct: 638 WREAADIRKLMKSKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLL 691
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 133/560 (23%), Positives = 235/560 (41%), Gaps = 115/560 (20%)
Query: 50 EMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALK 109
++PE N + +K+ L AR +FD KD +++ +++ GY+NA ++AL
Sbjct: 48 DLPESN-----KQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNAND-SSEALL 101
Query: 110 LFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDM 169
LF M+ + +R+D F ++ C +V +G LH + VKT S F S+L+DM
Sbjct: 102 LFKNMR-VESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDM 160
Query: 170 YSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNT 229
Y+K ++FEG + F P + + VSW
Sbjct: 161 YTK------NGKIFEG--------------------------RRVFHEMP-MRNVVSWTA 187
Query: 230 LISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG 289
+I+G V+ G +E L F M + V ++ +TFA AL AC + +EIH+ +K G
Sbjct: 188 IITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKG 247
Query: 290 LISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFD 349
+ FV++ + +Y KC + Y ++ F+
Sbjct: 248 FDVSSFVANTLATMYNKCGKLEYGLTL-------------------------------FE 276
Query: 350 SLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALH 409
++ ++VV WT + + V+ E + + V + ++ CA A +
Sbjct: 277 KMSMRDVVSWTTIITTLVQMGQEECAVQAFIR-MRESDVSPNEYTFAAVISGCANLARIE 335
Query: 410 PGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYA 469
G+++HA IL +G+ + ++++ MY+KCG +T + +IF RD+V ++ +IA Y+
Sbjct: 336 WGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYS 395
Query: 470 HHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA--------------------------- 502
GH +A L M +G KP ++LSA
Sbjct: 396 QGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAM 455
Query: 503 --------FRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKS 554
+ CGS+E + F++ D +S + MI+ Y + I+ +
Sbjct: 456 VLSALINMYCKCGSIEEASRIFDAAENDDIVS-----WTAMINGYAEHGYSREVIDLFEK 510
Query: 555 IPT---EEDAVILGSFLNVC 571
IP D+V L+ C
Sbjct: 511 IPRVGLRPDSVTFIGVLSAC 530
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 122/428 (28%), Positives = 196/428 (45%), Gaps = 44/428 (10%)
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
+ +L N + + G + A + F + + D +SW TLISGYV D+ E L LF
Sbjct: 46 QTDLPESNKQLKELVKTGHLGNARRMFDKMSQ-KDEISWTTLISGYVNANDSSEALLLFK 104
Query: 249 RMG-ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
M E+G+R + + A AC +V + +H + +K GL+++ FV S ++D+Y K
Sbjct: 105 NMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTK- 163
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
G + E RR F + +NVV WTA+ +G V
Sbjct: 164 ------------------------------NGKIFEGRRVFHEMPMRNVVSWTAIITGLV 193
Query: 368 KAQ-NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMD 426
+A N EAL SE + + V D+ I L ACA AL+ G+EIHA ++ G +
Sbjct: 194 RAGYNKEALV-YFSE-MWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVS 251
Query: 427 KKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
+ +TL MY+KCG + Y +F+ RD+V + +I G EE A+ F M E
Sbjct: 252 SFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRE 311
Query: 487 KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLE 546
+ P+ TF A++S + +E GE+ +++ ++ ++ +Y + QL
Sbjct: 312 SDVSPNEYTFAAVISGCANLARIEWGEQ-LHALILHLGLAASLSVENSIMTMYAKCGQLT 370
Query: 547 KAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKL--LRLEGNNKARYVQLANV 604
+ + T D V S+ + EA E L +R+EG + LA+V
Sbjct: 371 SSSVIFHEM-TRRDIV---SWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFA-LASV 425
Query: 605 YAAEGNWA 612
+A GN A
Sbjct: 426 LSACGNMA 433
>gi|255594521|ref|XP_002536106.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223520840|gb|EEF26277.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 187/526 (35%), Positives = 302/526 (57%), Gaps = 11/526 (2%)
Query: 51 MPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKL 110
MP + FSWNTI++ K L +A S+FD P +D V++ +M+ GY N G A+K+
Sbjct: 1 MPVKTTFSWNTILTGYAKLGTLAKAHSVFDEIPDRDSVSWTTMIVGY-NQMGRFESAIKM 59
Query: 111 FIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMY 170
F+ M + + +FTVT+ C L + G+++H+F++K +SL++MY
Sbjct: 60 FVAMMK--DKVLPTQFTVTNVFASCAALGALDIGKKIHSFVIKLGLSGCVPVANSLLNMY 117
Query: 171 SKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTL 230
+K A VF+ ++ S N M++ G ++AL F + E D V+WN++
Sbjct: 118 AKAGDSVMAKIVFDRMRLR-SISSWNIMISLHMHGGRADLALAQFEQMSE-RDVVTWNSM 175
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL 290
I+GY Q+G +E L+LF RM E+ ++ + T AS LSAC + N+ K+IHS++++
Sbjct: 176 ITGYSQHGFDKEALELFSRMLEDSLKPDRFTLASILSACANIENLNLGKQIHSYIIRTEF 235
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR--NSFSISSMIVGYSLQGNMEEARRHF 348
+ V + ++ +Y K + A+S++ G+ N + ++++ GY GN+ AR F
Sbjct: 236 DISGVVQNALISMYAKTGGVEIAQSIVEQSGISDLNVIAFTALLDGYVKLGNITPARHIF 295
Query: 349 DSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAAL 408
DSL + +VV WTA+ GYV+ + +L + KEG ++ L +L + A+L
Sbjct: 296 DSLKDSDVVAWTAMIVGYVQNGLNDDAMELF-RIMAKEGPRPNSFTLAAMLSVSSNVASL 354
Query: 409 HPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER--DLVLYNVMIA 466
+ GK+IHA +R G + + + L+ MY+K G++T A+ +F N I+R D V + MI
Sbjct: 355 NHGKQIHASAIRSGENLSVSVGNALITMYAKAGSITDAQQVF-NLIQRNKDTVSWTSMII 413
Query: 467 CYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKIS 526
HG +++I LFE+ML GIKPD +T+V +LSA H G VE G YFN MT+ +KI
Sbjct: 414 ALGQHGLGQESIELFEKMLALGIKPDHITYVGVLSACTHVGLVEQGRGYFNLMTSIHKIE 473
Query: 527 PETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCR 572
P HYACMIDL+GRA L++A F++++P E D + GS L+ C+
Sbjct: 474 PTLSHYACMIDLFGRAGLLQEAFSFIENMPIEPDVIAWGSLLSSCK 519
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 186/341 (54%), Gaps = 6/341 (1%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H IK GL+ N L+++Y+K ++ +FD M R++ SWN +IS +
Sbjct: 95 HSFVIKLGLSGCVPVANSLLNMYAKAGDSVMAKIVFDRMRLRSISSWNIMISLHMHGGRA 154
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
A + F+ +D+VT+NSM+ GY + G++ +AL+LF M ++ ++ D FT+ S L
Sbjct: 155 DLALAQFEQMSERDVVTWNSMITGY-SQHGFDKEALELFSRM--LEDSLKPDRFTLASIL 211
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE-GCTEEVN 191
+ C + N+ G+Q+H+++++T D SG ++LI MY+K E A + E ++N
Sbjct: 212 SACANIENLNLGKQIHSYIIRTEFDISGVVQNALISMYAKTGGVEIAQSIVEQSGISDLN 271
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
+I+ A++ + G + A F + +D V+W +I GYVQNG ++ ++LF M
Sbjct: 272 VIAFTALLDGYVKLGNITPARHIFDSLKD-SDVVAWTAMIVGYVQNGLNDDAMELFRIMA 330
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
+ G R N T A+ LS + ++ K+IH+ +++G + V + ++ +Y K ++
Sbjct: 331 KEGPRPNSFTLAAMLSVSSNVASLNHGKQIHASAIRSGENLSVSVGNALITMYAKAGSIT 390
Query: 312 YAESML-LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL 351
A+ + L++ +++ S +SMI+ G +E+ F+ +
Sbjct: 391 DAQQVFNLIQRNKDTVSWTSMIIALGQHGLGQESIELFEKM 431
>gi|356531902|ref|XP_003534515.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 223/667 (33%), Positives = 346/667 (51%), Gaps = 60/667 (8%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H ++K G T + N L+ +Y K + + +RKLFDE+P+RN +W +IS
Sbjct: 312 HALSVKNGSLQTLNSANYLLTLYVKSSNMDHARKLFDEIPQRNTQTWTILIS-------- 363
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
G+ A E KLF EM++ +++T++S
Sbjct: 364 -----------------------GFSRAGSSEV-VFKLFREMRAKGAC--PNQYTLSSLF 397
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C +N+ G+ +HA+M++ DA +S++D+Y KC+ +E A RVFE E ++
Sbjct: 398 KCCSLDINLQLGKGVHAWMLRNGIDADVVLGNSILDLYLKCKVFEYAERVFE-LMNEGDV 456
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+S N M++A R G++E +L F R P D VSWNT++ G +Q G + L+ M E
Sbjct: 457 VSWNIMISAYLRAGDVEKSLDMFRRLP-YKDVVSWNTIVDGLMQFGYERQALEQLYCMVE 515
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G ++ TF+ AL L V+ +++H VLK G + F+ S +V++YCKC M+
Sbjct: 516 CGTEFSVVTFSIALILSSSLSLVELGRQLHGMVLKFGFCRDGFIRSSLVEMYCKCGRMDN 575
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
A ++LK V F + GN + + +V W + SGYV
Sbjct: 576 AS--IVLKDVPLDFLKN---------GNAGVTCKEL----KAGIVSWGLMVSGYVWNGKY 620
Query: 373 EALFDLLSEF--VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
E D L F + +E VV D + ++ ACA L G+ +HAY ++G ++D +
Sbjct: 621 E---DGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYNHKIGHRIDAYVG 677
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
S+L+DMYSK G++ A IF+ E ++V + MI+ A HG ++AI LFEEML +GI
Sbjct: 678 SSLIDMYSKSGSLDDAWTIFRQTNEPNIVFWTSMISGCALHGQGKQAICLFEEMLNQGII 737
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
P+ VTF+ +L+A H G +E G +YF M Y I+P +H M+DLYGRA L +
Sbjct: 738 PNEVTFLGVLNACCHAGLLEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTETKN 797
Query: 551 FMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGN 610
F+ + SFL+ CRL++N E+ E LL++ ++ YV L+N+ A+
Sbjct: 798 FIFENGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHR 857
Query: 611 WAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
W E R+R M RG+K + G SW+ ++ +IH F +GD SHP+ IYS L I G L
Sbjct: 858 WDEAARVRSLMHQRGIK--KQPGQSWIQLKDQIHTFIMGDRSHPQDEEIYSYLDILIGRL 915
Query: 669 YEIAGAF 675
EI +F
Sbjct: 916 KEIGYSF 922
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 129/511 (25%), Positives = 231/511 (45%), Gaps = 67/511 (13%)
Query: 4 LNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
+NL+ H ++ G+ + N ++ +Y K + + ++F+ M E +V SWN +I
Sbjct: 404 INLQLGKGVHAWMLRNGIDADVVLGNSILDLYLKCKVFEYAERVFELMNEGDVVSWNIMI 463
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADAL-KLFIEMQSADEHIR 122
SA +++ D++++ +F P+KD+V++N+++ G + GYE AL +L+ ++ E
Sbjct: 464 SAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQF-GYERQALEQLYCMVECGTE--- 519
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
T + L L L V GRQLH ++K GF SSL++MY KC + A V
Sbjct: 520 FSVVTFSIALILSSSLSLVELGRQLHGMVLKFGFCRDGFIRSSLVEMYCKCGRMDNASIV 579
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
+ + KN C+E LK VSW ++SGYV NG E+
Sbjct: 580 LKDVPLD---FLKNGNAGVTCKE------LKA--------GIVSWGLMVSGYVWNGKYED 622
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
GLK F M V + T + +SAC ++ + +H++ K G + +V S ++D
Sbjct: 623 GLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYNHKIGHRIDAYVGSSLID 682
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
+Y K G++++A F E N+V WT++
Sbjct: 683 MYSK-------------------------------SGSLDDAWTIFRQTNEPNIVFWTSM 711
Query: 363 FSG-YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI-----HA 416
SG + Q +A+ L E + +G++ + + + +L AC L G A
Sbjct: 712 ISGCALHGQGKQAI--CLFEEMLNQGIIPNEVTFLGVLNACCHAGLLEEGCRYFRMMKDA 769
Query: 417 YILRMGVQMDKKLISTLVDMYSKCGNMTYAE-IIFQNFIERDLVLYNVMIACYAHHGHEE 475
Y + GV+ +++VD+Y + G++T + IF+N I ++ ++ H + E
Sbjct: 770 YCINPGVEH----CTSMVDLYGRAGHLTETKNFIFENGISHLTSVWKSFLSSCRLHKNVE 825
Query: 476 KAILLFEEMLEKGIK-PDAVTFVAILSAFRH 505
+ E +L+ P A ++ + A H
Sbjct: 826 MGKWVSEMLLQVAPSDPGAYVLLSNMCASNH 856
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 131/309 (42%), Gaps = 64/309 (20%)
Query: 281 IHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGN 340
+H+ +KNG + ++ ++ +Y K NM++A
Sbjct: 311 LHALSVKNGSLQTLNSANYLLTLYVKSSNMDHA--------------------------- 343
Query: 341 MEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLG 400
R+ FD + ++N WT L SG+ +A + E +F L E K G + L L
Sbjct: 344 ----RKLFDEIPQRNTQTWTILISGFSRAGSSEVVFKLFREMRAK-GACPNQYTLSSLFK 398
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL 460
C+L L GK +HA++LR G+ D L ++++D+Y KC YAE +F+ E D+V
Sbjct: 399 CCSLDINLQLGKGVHAWMLRNGIDADVVLGNSILDLYLKCKVFEYAERVFELMNEGDVVS 458
Query: 461 YNVMIACYAHHGHEEKAILLFEE-------------------------------MLEKGI 489
+N+MI+ Y G EK++ +F M+E G
Sbjct: 459 WNIMISAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQFGYERQALEQLYCMVECGT 518
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
+ VTF L VE+G + + M + + + ++++Y + +++ A
Sbjct: 519 EFSVVTFSIALILSSSLSLVELGRQ-LHGMVLKFGFCRDGFIRSSLVEMYCKCGRMDNAS 577
Query: 550 EFMKSIPTE 558
+K +P +
Sbjct: 578 IVLKDVPLD 586
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 209/733 (28%), Positives = 360/733 (49%), Gaps = 100/733 (13%)
Query: 27 TTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKD 86
T L+ Y++ + ++R++FD MPERN +WN ++S +++ D+ AR LFD+ P +D
Sbjct: 97 TATILLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSRD 156
Query: 87 LVTYNSMLCGYINAEGYEADALKLFIEMQSA---------------DEH------IRM-- 123
+ ++NSM+ GY ++ DA LF +M ++H RM
Sbjct: 157 VTSWNSMVTGYCHSRQM-VDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMH 215
Query: 124 ------DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK-CRCY 176
D+ S L+ L ++G L ++KT ++ +S++++Y++
Sbjct: 216 HEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASAL 275
Query: 177 EEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQP----------------- 219
+ A + F+G E N + + M+AA G ++ A+ + R P
Sbjct: 276 DIAIKFFDGMVER-NEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSIPSQTALLTGLARC 334
Query: 220 -----------ELNDA--VSWNTLISGYVQNGDAEEGLKLFVRMG--------------- 251
++ D VSWN +I+GY+QNG +E +LF RM
Sbjct: 335 GRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYA 394
Query: 252 ----------------ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF 295
NG+ + + S+ AC + ++ +++HS +K G N +
Sbjct: 395 QNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSY 454
Query: 296 VSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKN 355
V + ++ +Y KC NM Y + V+++ S +S I +E+AR FD++ ++
Sbjct: 455 VCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSRD 514
Query: 356 VVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIH 415
VV WT + S Y +A+ + + + E ++ IL ILL C + G++IH
Sbjct: 515 VVSWTTIISAYAQAERGDEAVEFFKTML-HEHEKPNSPILTILLSVCGGLGSAKLGQQIH 573
Query: 416 AYILRMGVQMDKKLI--STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH 473
++ G MD +LI + L+ MY KCG + +F + ERD+ +N I A HG
Sbjct: 574 TVAIKHG--MDSELIVANALMSMYFKCG-CADSHKVFDSMEERDIFTWNTFITGCAQHGL 630
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA 533
+AI ++E M G+ P+ VTFV +L+A H G V+ G ++F SM+ DY ++P +HYA
Sbjct: 631 GREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYA 690
Query: 534 CMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGN 593
CM+DL GR ++ A +F+ +P E D VI + L C++++NAE+ A EKL E +
Sbjct: 691 CMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGACKIHKNAEIGRRAAEKLFTTEPS 750
Query: 594 NKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPK 653
N YV L+N+Y++ G W E+ +RK M+ ++ GCSW+ + +++H F GD H K
Sbjct: 751 NAGNYVMLSNIYSSLGMWVEVAELRKIMKQRGVSKEPGCSWMQIRNKVHSFVTGDKQHEK 810
Query: 654 TNAI-YSVLAIFT 665
I Y++ ++T
Sbjct: 811 IEEIDYTLQDLYT 823
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 132/547 (24%), Positives = 231/547 (42%), Gaps = 112/547 (20%)
Query: 41 LRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINA 100
LRE+R++FD MP R++ +WN++ISA S L+ AR LFD+ ++ T +L GY
Sbjct: 49 LREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGNVRTATILLSGYARL 108
Query: 101 EGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASG 160
G DA ++F M + +
Sbjct: 109 -GRVLDARRVFDGMP-----------------------------------------ERNT 126
Query: 161 FAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPE 220
A ++++ Y + A R+F+ ++ S N+MV C +M A F + P+
Sbjct: 127 VAWNAMVSCYVQNGDITMARRLFDAMPSR-DVTSWNSMVTGYCHSRQMVDAWNLFKQMPQ 185
Query: 221 LNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKE 280
N V+W +ISGYV+ +G +F M G ++ FAS LSA GL+++ +
Sbjct: 186 RN-LVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEV 244
Query: 281 IHSWVLKNGLISNPFVSSGIVDVYCK---------------CENMNYAESMLLL------ 319
+ VLK G S+ + + I++VY + E Y S ++
Sbjct: 245 LRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGG 304
Query: 320 -----------KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
V++ S ++++ G + G + EAR F+ + + VV W A+ +GY++
Sbjct: 305 RIDAAIAVYGRDPVKSIPSQTALLTGLARCGRITEARILFEQIPDPIVVSWNAMITGYMQ 364
Query: 369 -----------------------------AQN--CEALFDLLSEFVTKEGVVTDALILVI 397
AQN E DLL + + + G++ L
Sbjct: 365 NGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLL-QALHRNGMLPSLSSLTS 423
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD 457
AC+ AL G+++H+ ++ G Q + + + L+ MY KC NM Y +F +D
Sbjct: 424 SFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKD 483
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFN 517
V +N IA + E A +F+ ML + D V++ I+SA+ + ++F
Sbjct: 484 TVSWNSFIAALVQNNMLEDARHIFDNMLSR----DVVSWTTIISAYAQAERGDEAVEFFK 539
Query: 518 SMTADYK 524
+M +++
Sbjct: 540 TMLHEHE 546
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 126/244 (51%), Gaps = 8/244 (3%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A+KAG + N LI +Y K + R++F+ M ++ SWN+ I+A ++++ L
Sbjct: 441 HSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNML 500
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+ AR +FD+ +D+V++ +++ Y AE + +A++ F M EH + + +T L
Sbjct: 501 EDARHIFDNMLSRDVVSWTTIISAYAQAERGD-EAVEFFKTM--LHEHEKPNSPILTILL 557
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
++C L + G+Q+H +K D+ ++L+ MY KC C ++ +VF+ EE ++
Sbjct: 558 SVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGC-ADSHKVFD-SMEERDI 615
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPE---LNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
+ N + C + G A+K + L + V++ L++ G +EG + F
Sbjct: 616 FTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKS 675
Query: 250 MGEN 253
M +
Sbjct: 676 MSRD 679
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 152/364 (41%), Gaps = 20/364 (5%)
Query: 194 SKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGEN 253
+ +A + R G + A + F P D ++WN++IS Y +G E+ LF +
Sbjct: 35 AHSARIRELARLGRLREAREVFDAMPH-RDIIAWNSMISAYCNSGMLEDARILFDAISGG 93
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA 313
VR T LS L V A+ + + + N + +V Y + ++ A
Sbjct: 94 NVR----TATILLSGYARLGRVLDARRVFDGMPER----NTVAWNAMVSCYVQNGDITMA 145
Query: 314 ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE 373
+ R+ S +SM+ GY M +A F + ++N+V WT + SGYV+ +
Sbjct: 146 RRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHG 205
Query: 374 ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL 433
+D+ + EG D +L A L + + +L+ G + D + +++
Sbjct: 206 KGWDIF-RMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSI 264
Query: 434 VDMYSK-CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
+++Y++ + A F +ER+ ++ MIA +H G + AI ++ K I
Sbjct: 265 LNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSIPSQ 324
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
A+L+ CG + F + +S + MI Y + +++A E
Sbjct: 325 ----TALLTGLARCGRITEARILFEQIPDPIVVS-----WNAMITGYMQNGMVDEAKELF 375
Query: 553 KSIP 556
+P
Sbjct: 376 DRMP 379
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 101/239 (42%), Gaps = 25/239 (10%)
Query: 339 GNMEEARRHFDSLTEKNVVVWTALFSGYVKA---QNCEALFDLLSEFVTKEGVVTDALIL 395
G + EAR FD++ ++++ W ++ S Y + ++ LFD +S G V A IL
Sbjct: 47 GRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAIS-----GGNVRTATIL 101
Query: 396 VILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIE 455
L G L L + R V + +V Y + G++T A +F
Sbjct: 102 --LSGYARLGRVLDARRVFDGMPERNTVAWN-----AMVSCYVQNGDITMARRLFDAMPS 154
Query: 456 RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKY 515
RD+ +N M+ Y H A LF++M ++ + VT+ ++S + G
Sbjct: 155 RDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNL----VTWTVMISGYVRIEQHGKGWDI 210
Query: 516 FNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPT----EEDAVILGSFLNV 570
F M + SP+ ++A ++ L +E ++ + E D VI S LNV
Sbjct: 211 FRMMHHE-GASPDQSNFASVLSAVTGLQDL-GVLEVLRPLVLKTGFESDVVIGTSILNV 267
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 59/137 (43%), Gaps = 13/137 (9%)
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
+DK S + ++ G + A +F RD++ +N MI+ Y + G E A +LF+ +
Sbjct: 31 LDKSAHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAI 90
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA--CMIDLYGRA 542
++ T +LS + G V + F+ M PE + A M+ Y +
Sbjct: 91 SGGNVR----TATILLSGYARLGRVLDARRVFDGM-------PERNTVAWNAMVSCYVQN 139
Query: 543 NQLEKAIEFMKSIPTEE 559
+ A ++P+ +
Sbjct: 140 GDITMARRLFDAMPSRD 156
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 215/652 (32%), Positives = 332/652 (50%), Gaps = 88/652 (13%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTIT-TNQLIHIYSKHNLLRESRKLFDEMPERNVFSW 59
+ + +L +A + H I+ I+ N+L+ IY K L E+R++FDEMP +NV SW
Sbjct: 75 LNAKSLPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSW 134
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
+I+A + H+ Q +AL F EMQ D
Sbjct: 135 TAMIAAYAR-HEHGQ-------------------------------EALGFFYEMQ--DV 160
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
I+ + FT S L C L +G + H +VK +++ F + L+DMY+K C E A
Sbjct: 161 GIQPNHFTFASILPACTDLEVLG---EFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFA 217
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
+F+ + +++S NAM+A + G +E ALK F P+ D ++WNT+++GY Q GD
Sbjct: 218 RELFDKMPQR-DVVSWNAMIAGYVQNGLIEDALKLFQEIPK-RDVITWNTMMAGYAQCGD 275
Query: 240 AEEGLKLFVRMGE-NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
E ++LF +M E N V WN I +V +NG + F
Sbjct: 276 VENAVELFEKMPEQNLVSWNTM--------------------IAGYV-QNGSVKEAF--- 311
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
+ + RN S +++I G++ G +EEA + F ++ E NVV
Sbjct: 312 ----------------KLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVS 355
Query: 359 WTALFSGYV---KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIH 415
W A+ +GY +A+N LF + K T I+L ACA A L G E H
Sbjct: 356 WNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTET----FAIVLPACAALAVLEQGNEAH 411
Query: 416 AYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEE 475
++R G Q D + +TLV MY+KCG++ A +F ++D + MI YA +G +
Sbjct: 412 EVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSK 471
Query: 476 KAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACM 535
+++ LFE+M G+KPD VTFV +LSA H G V+ G +YF+ MT Y I+P +HY CM
Sbjct: 472 ESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRFYHITPAMEHYGCM 531
Query: 536 IDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNK 595
IDL GRA ++A + + +P + DA + GS L+ CR + N +L + + L+ L N
Sbjct: 532 IDLLGRAGCFDEANDLINKMPIKPDADMWGSLLSACRTHNNIDLGEKVAQHLIALNPQNP 591
Query: 596 ARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVG 647
A YV L+N+YAA G W ++G +R +M+ K + GCSW+ ++ ++H F VG
Sbjct: 592 APYVLLSNIYAAAGRWDDIGSVRNRMKDRKVKKKLGCSWIVIKKQVHAFLVG 643
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 160/355 (45%), Gaps = 64/355 (18%)
Query: 228 NTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLK 287
+ L+ + G E L + M ENG+ + T+ S L C +++ AK +H+ +++
Sbjct: 33 DGLVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQ 92
Query: 288 NGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRH 347
+C++++ ++ + Y G++ EARR
Sbjct: 93 TQF---------------ECQDISLGNKLVSI---------------YVKLGSLVEARRV 122
Query: 348 FDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAA 407
FD + KNVV WTA+ + Y + ++ + E + G+ + +L AC
Sbjct: 123 FDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYE-MQDVGIQPNHFTFASILPACTDLEV 181
Query: 408 LHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIAC 467
L E H I++ G + + + + LVDMY+K G + +A +F +RD+V +N MIA
Sbjct: 182 L---GEFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAG 238
Query: 468 YAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYF----------- 516
Y +G E A+ LF+E+ ++ D +T+ +++ + CG VE + F
Sbjct: 239 YVQNGLIEDALKLFQEIPKR----DVITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSW 294
Query: 517 NSMTADY-------------KISPETD--HYACMIDLYGRANQLEKAIEFMKSIP 556
N+M A Y +I PE + + +I + + Q+E+A++ K++P
Sbjct: 295 NTMIAGYVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMP 349
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 91/179 (50%), Gaps = 13/179 (7%)
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQ-MDKKLISTLVDMYSKCGNMTYAEIIFQNFIER 456
LL C +L K +HA++++ + D L + LV +Y K G++ A +F +
Sbjct: 70 LLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVK 129
Query: 457 DLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYF 516
++V + MIA YA H H ++A+ F EM + GI+P+ TF +IL A C +E+ ++
Sbjct: 130 NVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPA---CTDLEVLGEFH 186
Query: 517 NSMTADYKISPETDHYA--CMIDLYGRANQLEKAIEFMKSIPTEE----DAVILGSFLN 569
+ + K E++ + ++D+Y + +E A E +P + +A+I G N
Sbjct: 187 DEIV---KGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQN 242
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 212/664 (31%), Positives = 320/664 (48%), Gaps = 79/664 (11%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + G N L+ +YS+ L ++RK+FDEMP +V SWN+II + K
Sbjct: 150 HALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKP 209
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
K A +F N G+ R D+ T+ + L
Sbjct: 210 KMALEMFSK---------------MTNEFGF------------------RPDDITLVNVL 236
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C + G+Q H F V + + F + L+DMY+K +EA VF + ++
Sbjct: 237 PPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVK-DV 295
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELN---DAVSWNTLISGYVQNGDAEEGLKLFVR 249
+S NAMVA + G E A++ F + E D V+W+ ISGY Q G E L + +
Sbjct: 296 VSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQ 355
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVL-------KNGLISNPFVSSGIVD 302
M +G++ NE T S LS C + + KEIH + + KNG V + ++D
Sbjct: 356 MLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLID 415
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT--EKNVVVWT 360
+Y KC+ ++ A +M FDSL+ E++VV WT
Sbjct: 416 MYAKCKKVDIARAM-------------------------------FDSLSPKERDVVTWT 444
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKE-GVVTDALILVILLGACALQAALHPGKEIHAYIL 419
+ GY + + +LLSE ++ +A + L ACA AAL GK+IHAY L
Sbjct: 445 VMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYAL 504
Query: 420 RMGVQMDKKLIST-LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
R +S L+DMY+KCG++ A ++F N +E++ V + ++ Y HG+ E+A+
Sbjct: 505 RNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEAL 564
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
+FEEM G K D VT + +L A H G ++ G +YFN M D+ +SP +HYAC++DL
Sbjct: 565 GIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDL 624
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARY 598
GRA +L A+ ++ +P E V+ + L+ CR++ EL A +K+ L NN Y
Sbjct: 625 LGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGEYAAKKITELASNNDGSY 684
Query: 599 VQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
L+N+YA G W ++ RIR MR + GCSWV F VGD +HP IY
Sbjct: 685 TLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIY 744
Query: 659 SVLA 662
VL+
Sbjct: 745 QVLS 748
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 140/506 (27%), Positives = 228/506 (45%), Gaps = 57/506 (11%)
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTY--NSMLCGYINAEGYEADALKLFIEMQSADE 119
+IS I L A SL P D Y NS++ Y N G L F M S
Sbjct: 65 LISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGN-NGRANKCLSSFCLMHSLS- 122
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
D +T C ++ +V G HA T ++ F ++L+ MYS+C +A
Sbjct: 123 -WTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDA 181
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
+VF+ EM + W D VSWN++I Y + G
Sbjct: 182 RKVFD------------------------EMPV---W------DVVSWNSIIESYAKLGK 208
Query: 240 AEEGLKLFVRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
+ L++F +M E G R ++ T + L C + K+ H + + + +I N FV +
Sbjct: 209 PKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGN 268
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK---- 354
+VD+Y K M+ A ++ V++ S ++M+ GYS G E+A R F+ + E+
Sbjct: 269 CLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKM 328
Query: 355 NVVVWTALFSGYV-KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
+VV W+A SGY + EAL + + G+ + + L+ +L CA AL GKE
Sbjct: 329 DVVTWSAAISGYAQRGLGYEALG--VCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKE 386
Query: 414 IHAYILRMGVQMDKK-------LISTLVDMYSKCGNMTYAEIIFQNFI--ERDLVLYNVM 464
IH Y ++ + + K +I+ L+DMY+KC + A +F + ERD+V + VM
Sbjct: 387 IHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVM 446
Query: 465 IACYAHHGHEEKAILLFEEMLEKG--IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTAD 522
I Y+ HG KA+ L EM E+ +P+A T L A ++ +G++ +
Sbjct: 447 IGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRN 506
Query: 523 YKISPETDHYACMIDLYGRANQLEKA 548
+ + C+ID+Y + + A
Sbjct: 507 QQNAVPLFVSNCLIDMYAKCGDIGDA 532
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 137/320 (42%), Gaps = 29/320 (9%)
Query: 346 RHFDSLTEKNVVVWTALFSGYV---KAQNCEALFDLLSEFVTKEGVVTDALILVILLGAC 402
R F ++ V W +L Y +A C + F L+ D + AC
Sbjct: 83 RRFPP-SDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSL----SWTPDNYTFPFVFKAC 137
Query: 403 ALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYN 462
+++ G HA G + + + LV MYS+CG+++ A +F D+V +N
Sbjct: 138 GEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWN 197
Query: 463 VMIACYAHHGHEEKAILLFEEML-EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTA 521
+I YA G + A+ +F +M E G +PD +T V +L G+ +G K F+
Sbjct: 198 SIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLG-KQFHGFAV 256
Query: 522 DYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE----DAVILGSFLNVCRLNRNA 577
++ C++D+Y + +++A ++P ++ +A++ G + + R
Sbjct: 257 TSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAG-YSQIGRFEDAV 315
Query: 578 ELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQM--RGMKGNR------F 629
L + +E+ ++++ + + YA G E + +QM G+K N
Sbjct: 316 RLFEQMQEEKIKMD---VVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVL 372
Query: 630 AGCSWVYV---EHEIHIFTV 646
+GC+ V EIH + +
Sbjct: 373 SGCASVGALMHGKEIHCYAI 392
>gi|413933352|gb|AFW67903.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 788
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 206/648 (31%), Positives = 343/648 (52%), Gaps = 12/648 (1%)
Query: 24 TTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP 83
++ T + ++ + K + +R+LF MPE++V S+ T++ A +K ++ A L++ P
Sbjct: 148 SSFTYDFMVSEHVKAGDIASARRLFYGMPEKSVVSYTTMVDALMKRGSVRDAVELYERCP 207
Query: 84 HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGF 143
+ + +M+ G++ E ++ DA +F +M + +R + T+ + CV
Sbjct: 208 LHSVAFFTAMISGFVRNELHK-DAFTVFRKMLTCS--VRPNVVTLICVIKACVGAGEFDL 264
Query: 144 GRQLHAFMVKTSNDASGFAV-SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAAC 202
+ VK + V +SLI +Y + A RVF+ E +++S A++
Sbjct: 265 AMGVVGLAVKCNLFEKSIEVHNSLITLYLRMGDAAAARRVFDD-MEVRDVVSWTALLDVY 323
Query: 203 CREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTF 262
G+++ A + P N+ VSW TLI+ + Q GD E LKL+ +M +G R N F
Sbjct: 324 ADLGDLDGARRVLDAMPARNE-VSWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISCF 382
Query: 263 ASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGV 322
+S LSAC L++++ IH+ LK G +N FVSS ++D+YCKC+ YA+ +
Sbjct: 383 SSVLSACATLQDLRGGTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLPE 442
Query: 323 RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF 382
+N+ +S+I GYS G M EA F+ + +N V W + SGY + + D L+ F
Sbjct: 443 KNTVCWNSLISGYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENRR---FGDALNYF 499
Query: 383 --VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC 440
+ G + + L +L ACA +L G+ +HA I+++G++ + + + L DMY+K
Sbjct: 500 YAMLASGHIPGEITLSSVLLACANLCSLEMGRMVHAEIVKLGIEDNIFMGTALCDMYAKS 559
Query: 441 GNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAIL 500
G++ + +F E++ + + M+ A +G E++I LFE+M+E GI P+ TF+AIL
Sbjct: 560 GDLDSSRRVFYQMPEKNNITWTAMVQGLAENGFAEESISLFEDMIENGIAPNEHTFLAIL 619
Query: 501 SAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEED 560
A HCG VE YF +M A + I P++ HY CM+D+ RA L +A E + + +E D
Sbjct: 620 FACSHCGLVEQAIHYFETMQA-HGIPPKSKHYTCMVDVLARAGCLPEAEELLMKVSSELD 678
Query: 561 AVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQ 620
S L+ C RN E+ A +KL LE +N A YV L+N+YA+ G W + R
Sbjct: 679 TSSWSSLLSACSTYRNKEIGERAAKKLHELEKDNTAGYVLLSNMYASCGKWKDAAETRIL 738
Query: 621 MRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
M+G + AGCSW+ + + H F HP + IY +L + EL
Sbjct: 739 MQGASLKKDAGCSWLQLRGQYHAFFSWKEKHPLSLEIYEILDLLMLEL 786
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 168/352 (47%), Gaps = 41/352 (11%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L+ H A+K G + ++ LI +Y K ++++F+ +PE+N WN++IS
Sbjct: 394 DLRGGTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLPEKNTVCWNSLIS 453
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
+ + +A LF+ P ++ V++N+M+ GY + DAL F M A HI
Sbjct: 454 GYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRF-GDALNYFYAML-ASGHIP-G 510
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
E T++S L C L ++ GR +HA +VK + + F ++L DMY+K
Sbjct: 511 EITLSSVLLACANLCSLEMGRMVHAEIVKLGIEDNIFMGTALCDMYAK------------ 558
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
G+++ + + F++ PE N+ ++W ++ G +NG AEE +
Sbjct: 559 --------------------SGDLDSSRRVFYQMPEKNN-ITWTAMVQGLAENGFAEESI 597
Query: 245 KLFVRMGENGVRWNEHTFASALSAC--CGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
LF M ENG+ NEHTF + L AC CGL V+ A + +G+ + +VD
Sbjct: 598 SLFEDMIENGIAPNEHTFLAILFACSHCGL--VEQAIHYFETMQAHGIPPKSKHYTCMVD 655
Query: 303 VYCKCENMNYAESMLL-LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
V + + AE +L+ + ++ S SS++ S N E R L E
Sbjct: 656 VLARAGCLPEAEELLMKVSSELDTSSWSSLLSACSTYRNKEIGERAAKKLHE 707
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/357 (20%), Positives = 148/357 (41%), Gaps = 73/357 (20%)
Query: 281 IHSWVLKNGLISNPFVSSGIVDVY---CKCENMNYAESMLLLKGVRNSFSISSMIVGYSL 337
+H+ L++GL ++ V+S ++ Y + + + A + +SF+ M+ +
Sbjct: 102 LHAHALRSGLATDRSVASNLLTAYAAFARAGDRDQAFRDCVAADAASSFTYDFMVSEHVK 161
Query: 338 QGNMEEARRHFDSLTEKNVVVW-------------------------------TALFSGY 366
G++ ARR F + EK+VV + TA+ SG+
Sbjct: 162 AGDIASARRLFYGMPEKSVVSYTTMVDALMKRGSVRDAVELYERCPLHSVAFFTAMISGF 221
Query: 367 VKAQNCEALFDLLSEFVT---KEGVVTDALILVILLGACALQAAL------------HPG 411
V+ + + F + + +T + VVT ++ +GA A+
Sbjct: 222 VRNELHKDAFTVFRKMLTCSVRPNVVTLICVIKACVGAGEFDLAMGVVGLAVKCNLFEKS 281
Query: 412 KEIHAYI----LRMGVQMDKKLI------------STLVDMYSKCGNMTYAEIIFQNFIE 455
E+H + LRMG + + + L+D+Y+ G++ A +
Sbjct: 282 IEVHNSLITLYLRMGDAAAARRVFDDMEVRDVVSWTALLDVYADLGDLDGARRVLDAMPA 341
Query: 456 RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK- 514
R+ V + +IA + G +A+ L+ +ML G +P+ F ++LSA + G +
Sbjct: 342 RNEVSWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISCFSSVLSACATLQDLRGGTRI 401
Query: 515 YFNSMTADYKISPETDHY--ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLN 569
+ N++ K+ T+ + + +ID+Y + Q A S+P E++ V S ++
Sbjct: 402 HANAL----KMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLP-EKNTVCWNSLIS 453
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 196/654 (29%), Positives = 325/654 (49%), Gaps = 99/654 (15%)
Query: 11 ICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSH 70
+ H A+K GL + + L+ +Y+K+ + E R++F EM
Sbjct: 137 LLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEM------------------- 177
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
P +++V++ +++ G + A GY +AL F EM + + D +T
Sbjct: 178 ------------PMRNVVSWTAIITGLVRA-GYNKEALVYFSEMWRS--RVEYDSYTFAI 222
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L C + +GR++HA +K D S F ++L MY+KC
Sbjct: 223 ALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKC----------------- 265
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
G++E L T + + + D VSW T+I+ VQ G E ++ F+RM
Sbjct: 266 ---------------GKLEYGL-TLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRM 309
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
E+ V NE+TFA+ +S C L ++ +++H+ +L GL ++ V + I+ +Y KC
Sbjct: 310 RESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKC--- 366
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
+ SS+I F +T +++V W+ + +GY +
Sbjct: 367 -------------GQLTSSSVI---------------FHEMTRRDIVSWSTIIAGYXQGG 398
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
+ F+LLS ++ EG L +L AC A L GK++HAY+L +G++ ++
Sbjct: 399 HVSEAFELLS-WMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVL 457
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
S L++MY KCG++ A IF D+V + MI YA HG+ + I LFE++ G++
Sbjct: 458 SALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLR 517
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
PD+VTF+ +LSA H G V++G YFN+M+ Y+ISP +HY CMIDL RA +L A
Sbjct: 518 PDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEH 577
Query: 551 FMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGN 610
++++P D V+ + L CR++ + E E++L+LE N ++ LAN+YA++G
Sbjct: 578 MIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGK 637
Query: 611 WAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIF 664
W E IRK M+ + G SW+ V+ + F GD SHP+ IY++L +
Sbjct: 638 WREAADIRKLMKSKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLL 691
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 133/560 (23%), Positives = 234/560 (41%), Gaps = 115/560 (20%)
Query: 50 EMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALK 109
++PE N + +K+ L AR +FD KD +++ +++ GY+NA ++AL
Sbjct: 48 DLPESN-----KQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNAND-SSEALL 101
Query: 110 LFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDM 169
LF M+ + +R+D F ++ C +V +G LH + VKT S F S+L+DM
Sbjct: 102 LFKNMR-VESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDM 160
Query: 170 YSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNT 229
Y+K ++FEG + F P + + VSW
Sbjct: 161 YTK------NGKIFEG--------------------------RRVFHEMP-MRNVVSWTA 187
Query: 230 LISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG 289
+I+G V+ G +E L F M + V ++ +TFA AL AC + +EIH+ +K G
Sbjct: 188 IITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKG 247
Query: 290 LISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFD 349
+ FV++ + +Y KC + Y ++ F+
Sbjct: 248 FDVSSFVANTLATMYNKCGKLEYGLTL-------------------------------FE 276
Query: 350 SLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALH 409
++ ++VV WT + + V+ E + + V + ++ CA A +
Sbjct: 277 KMSMRDVVSWTTIITTLVQMGQEECAVQAFIR-MRESDVSPNEYTFAAVISGCANLARIE 335
Query: 410 PGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYA 469
G+++HA IL +G+ + ++++ MY+KCG +T + +IF RD+V ++ +IA Y
Sbjct: 336 WGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYX 395
Query: 470 HHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA--------------------------- 502
GH +A L M +G KP ++LSA
Sbjct: 396 QGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAM 455
Query: 503 --------FRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKS 554
+ CGS+E + F++ D +S + MI+ Y + I+ +
Sbjct: 456 VLSALINMYCKCGSIEEASRIFDAAENDDIVS-----WTAMINGYAEHGYSREVIDLFEK 510
Query: 555 IPT---EEDAVILGSFLNVC 571
IP D+V L+ C
Sbjct: 511 IPRVGLRPDSVTFIGVLSAC 530
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 122/428 (28%), Positives = 196/428 (45%), Gaps = 44/428 (10%)
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
+ +L N + + G + A + F + + D +SW TLISGYV D+ E L LF
Sbjct: 46 QTDLPESNKQLKELVKTGHLGNARRMFDKMSQ-KDEISWTTLISGYVNANDSSEALLLFK 104
Query: 249 RMG-ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
M E+G+R + + A AC +V + +H + +K GL+++ FV S ++D+Y K
Sbjct: 105 NMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTK- 163
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
G + E RR F + +NVV WTA+ +G V
Sbjct: 164 ------------------------------NGKIFEGRRVFHEMPMRNVVSWTAIITGLV 193
Query: 368 KAQ-NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMD 426
+A N EAL SE + + V D+ I L ACA AL+ G+EIHA ++ G +
Sbjct: 194 RAGYNKEALV-YFSE-MWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVS 251
Query: 427 KKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
+ +TL MY+KCG + Y +F+ RD+V + +I G EE A+ F M E
Sbjct: 252 SFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRE 311
Query: 487 KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLE 546
+ P+ TF A++S + +E GE+ +++ ++ ++ +Y + QL
Sbjct: 312 SDVSPNEYTFAAVISGCANLARIEWGEQ-LHALILHLGLAASLSVENSIMTMYAKCGQLT 370
Query: 547 KAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKL--LRLEGNNKARYVQLANV 604
+ + T D V S+ + EA E L +R+EG + LA+V
Sbjct: 371 SSSVIFHEM-TRRDIV---SWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFA-LASV 425
Query: 605 YAAEGNWA 612
+A GN A
Sbjct: 426 LSACGNMA 433
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 192/605 (31%), Positives = 318/605 (52%), Gaps = 66/605 (10%)
Query: 69 SHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
S DL A +FD P ++LVT+ M+ + G DA+ LF++M+ + D FT
Sbjct: 196 SGDLGSAYKVFDKMPERNLVTWTLMITRFAQL-GCARDAIDLFLDMELSG--YVPDRFTY 252
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE 188
+S L+ C +L + G+QLH+ +++ SL+DMY+KC
Sbjct: 253 SSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAA------------- 299
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE-EGLKLF 247
+G ++ + K F + PE N +SW +I+ YVQ+G+ + E ++LF
Sbjct: 300 ----------------DGSVDDSRKVFEQMPEHN-VMSWTAIITAYVQSGECDKEAIELF 342
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
+M +R N +F+S L AC L + ++++S+ +K G+ S V + ++ +Y +
Sbjct: 343 CKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYAR- 401
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
G ME+AR+ FD L EKN+V + A+ GY
Sbjct: 402 ------------------------------SGRMEDARKAFDILFEKNLVSYNAIVDGYA 431
Query: 368 KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDK 427
K E F L +E + G+ A LL A A+ G++IH +L+ G + ++
Sbjct: 432 KNLKSEEAFLLFNE-IADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQ 490
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
+ + L+ MYS+CGN+ A +F +R+++ + MI +A HG +A+ +F +MLE
Sbjct: 491 CICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLET 550
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEK 547
G KP+ +T+VA+LSA H G + G+K+FNSM ++ I P +HYACM+DL GR+ L +
Sbjct: 551 GTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVE 610
Query: 548 AIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAA 607
A+EF+ S+P DA++ + L CR++ N EL A E +L E ++ A Y+ L+N++A+
Sbjct: 611 AMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHAS 670
Query: 608 EGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGE 667
G W ++ +IRK M+ + AGCSW+ VE+ +H F VG+ SHP+ IY L +
Sbjct: 671 AGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASK 730
Query: 668 LYEIA 672
+ E+
Sbjct: 731 IKEMG 735
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 128/511 (25%), Positives = 235/511 (45%), Gaps = 72/511 (14%)
Query: 45 RKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK-DLVTYNSMLCGYINAEGY 103
RKL E + NT+IS K D + AR +F+ +K DLV++++M+ + N
Sbjct: 68 RKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFAN-NSM 126
Query: 104 EADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV 163
E A+ F++M + +E+ + + C G ++ F+VKT + V
Sbjct: 127 EWQAIWTFLDM--LELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCV 184
Query: 164 S-SLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN 222
LIDM+ K G++ A K F + PE N
Sbjct: 185 GCELIDMFVK-------------------------------GSGDLGSAYKVFDKMPERN 213
Query: 223 DAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIH 282
V+W +I+ + Q G A + + LF+ M +G + T++S LSAC L + K++H
Sbjct: 214 -LVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLH 272
Query: 283 SWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNME 342
S V++ GL + V +VD+Y KC + G+++
Sbjct: 273 SRVIRLGLALDVCVGCSLVDMYAKC----------------------------AADGSVD 304
Query: 343 EARRHFDSLTEKNVVVWTALFSGYVKAQNCEA-LFDLLSEFVTKEGVVTDALILVILLGA 401
++R+ F+ + E NV+ WTA+ + YV++ C+ +L + ++ + + +L A
Sbjct: 305 DSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGH-IRPNHFSFSSVLKA 363
Query: 402 CALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLY 461
C + + G+++++Y +++G+ + ++L+ MY++ G M A F E++LV Y
Sbjct: 364 CGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSY 423
Query: 462 NVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTA 521
N ++ YA + E+A LLF E+ + GI A TF ++LS G++ GE+ +
Sbjct: 424 NAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRL-- 481
Query: 522 DYKISPETDHYAC--MIDLYGRANQLEKAIE 550
K +++ C +I +Y R +E A +
Sbjct: 482 -LKGGYKSNQCICNALISMYSRCGNIEAAFQ 511
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 118/486 (24%), Positives = 199/486 (40%), Gaps = 106/486 (21%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSK---HNLLRESRKLFDEMPERNVFSWNTIISACIKS 69
H + I+ GL L L+ +Y+K + +SRK+F++MPE NV SW II+A
Sbjct: 272 HSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITA---- 327
Query: 70 HDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVT 129
Y+ + + +A++LF +M S HIR + F+ +
Sbjct: 328 ---------------------------YVQSGECDKEAIELFCKMISG--HIRPNHFSFS 358
Query: 130 STLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEE 189
S L C L + G Q++++ VK + +SLI MY++ E+A + F+
Sbjct: 359 SVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFD----- 413
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
L KN VS+N ++ GY +N +EE LF
Sbjct: 414 -ILFEKN---------------------------LVSYNAIVDGYAKNLKSEEAFLLFNE 445
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
+ + G+ + TFAS LS + + ++IH +LK G SN + + ++ +Y +C N
Sbjct: 446 IADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGN 505
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL----TEKNVVVWTALFS- 364
+ A + RN S +SMI G++ G A F + T+ N + + A+ S
Sbjct: 506 IEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSA 565
Query: 365 ---------------------GYV-KAQNCEALFDLLS---------EFVTKEGVVTDAL 393
G V + ++ + DLL EF+ ++ DAL
Sbjct: 566 CSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADAL 625
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF 453
+ LLGAC + G+ IL D L ++++ G I ++
Sbjct: 626 VWRTLLGACRVHGNTELGRHAAEMILEQEPD-DPAAYILLSNLHASAGQWKDVVKIRKSM 684
Query: 454 IERDLV 459
ER+L+
Sbjct: 685 KERNLI 690
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 77/134 (57%), Gaps = 1/134 (0%)
Query: 381 EFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC 440
+ +T++ D ILL +C GK +H +++ G+++D +++TL+ +YSKC
Sbjct: 33 DLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKC 92
Query: 441 GNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
G+ A +IF+ +RDLV ++ M++C+A++ E +AI F +MLE G P+ F A+
Sbjct: 93 GDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAV 152
Query: 500 LSAFRHCGSVEMGE 513
+ A + +GE
Sbjct: 153 IRACSNANYAWVGE 166
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 120/258 (46%), Gaps = 37/258 (14%)
Query: 261 TFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLK 320
T++ L +C RN + K +H ++++GL + V + ++ +Y KC
Sbjct: 46 TYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKC------------- 92
Query: 321 GVRNSFSISSMIVGYSLQGNMEEARRHFDSL-TEKNVVVWTALFSGYV-KAQNCEALFDL 378
G+ E AR F+ + ++++V W+A+ S + + +A++
Sbjct: 93 ------------------GDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTF 134
Query: 379 LSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG-VQMDKKLISTLVDMY 437
L + + G + ++ AC+ G+ I+ ++++ G ++ D + L+DM+
Sbjct: 135 LD--MLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMF 192
Query: 438 SK-CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTF 496
K G++ A +F ER+LV + +MI +A G AI LF +M G PD T+
Sbjct: 193 VKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTY 252
Query: 497 VAILSAFRHCGSVEMGEK 514
++LSA G + +G++
Sbjct: 253 SSVLSACTELGLLALGKQ 270
>gi|357507741|ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 755
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 208/617 (33%), Positives = 332/617 (53%), Gaps = 24/617 (3%)
Query: 58 SWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSA 117
S N +++ +KS +L A LFD HK+ T+ ++ G+ A G LF EMQ+
Sbjct: 69 SANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARAAGSSELVFSLFREMQA- 127
Query: 118 DEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYE 177
+ +++T++S L C + N+ FG+ +HA++++ +S++D+Y KC+ +E
Sbjct: 128 -DGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFE 186
Query: 178 EACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQN 237
A FE E+ +++S N M+ A REG++E +L+ F P D VSWNT+I G +Q
Sbjct: 187 YAESFFELMIEK-DVVSWNIMIGAYLREGDVEKSLEMFRNFPN-KDVVSWNTIIDGLIQC 244
Query: 238 GDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVS 297
G L+ M +G ++ TF+ AL L V+ +++H VL GL S+ ++
Sbjct: 245 GYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRVLTFGLNSDGYIR 304
Query: 298 SGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVV 357
S +V++Y KC M+ A ++L + + + +GN + + +V
Sbjct: 305 SSLVEMYGKCGRMDKASTIL-----------KDVPLNFLRKGNFGVTCKE----PKARMV 349
Query: 358 VWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
W+++ SGYV E V E +V D + ++ ACA L GK+IHAY
Sbjct: 350 SWSSMVSGYVWNGKYEDGMKTFRSMVC-ELIVVDIRTVATIISACANAGILEFGKQIHAY 408
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
I ++G+++D + S+L+DMYSK G++ A +IF+ E ++VL+ MI+ A HG ++A
Sbjct: 409 IQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEA 468
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID 537
I LFE ML GI P+ VTFV +L+A H G +E G +YF M Y I+PE +HY M++
Sbjct: 469 ISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINPEVEHYTSMVN 528
Query: 538 LYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKAR 597
LYGRA L +A F+ + SFL+ CRL++N + E LL+ ++
Sbjct: 529 LYGRAGHLIEAKNFIFENSISHFTSVWRSFLSSCRLHKNFNMGKSVSEMLLQSAPSDPDA 588
Query: 598 YVQLANVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTN 655
Y+ L+N+ ++ W E +R M RG+K + G SWV ++ +IH FTVGD SHP+
Sbjct: 589 YILLSNMCSSNHQWDEAAIVRSLMYQRGVK--KQPGQSWVQLKDQIHSFTVGDRSHPQDK 646
Query: 656 AIYSVLAIFTGELYEIA 672
IYS L G L EI
Sbjct: 647 EIYSYLDSLIGRLKEIG 663
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 123/512 (24%), Positives = 238/512 (46%), Gaps = 65/512 (12%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R N++ H ++ G+ + N ++ +Y K + F+ M E++V SWN
Sbjct: 146 RENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELMIEKDVVSWNI 205
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I A ++ D++++ +F + P+KD+V++N+++ G I GYE AL+ M +
Sbjct: 206 MIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQC-GYERLALEQLYCMVAHGTEF 264
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
F++ L + L+ V GRQLH ++ ++ G+ SSL++MY KC ++A
Sbjct: 265 SPVTFSIALILVSSLSLVEV--GRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKAST 322
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+ + +N + K C+E + M VSW++++SGYV NG E
Sbjct: 323 ILKDVP--LNFLRKGNF-GVTCKEPKARM--------------VSWSSMVSGYVWNGKYE 365
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
+G+K F M + + T A+ +SAC ++ K+IH+++ K GL + +V S ++
Sbjct: 366 DGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLI 425
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D+Y K G++++A F+ + E NVV+WT+
Sbjct: 426 DMYSK-------------------------------SGSLDDALMIFEQIKEPNVVLWTS 454
Query: 362 LFSG-YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
+ SG + Q EA+ L E + G++ + + V +L AC+ + G R
Sbjct: 455 MISGCALHGQGKEAI--SLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEG----CRYFR 508
Query: 421 M-----GVQMDKKLISTLVDMYSKCGNMTYAE-IIFQNFIERDLVLYNVMIACYAHHGHE 474
M + + + +++V++Y + G++ A+ IF+N I ++ ++ H +
Sbjct: 509 MMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLSSCRLHKNF 568
Query: 475 EKAILLFEEMLEKGIK-PDAVTFVAILSAFRH 505
+ E +L+ PDA ++ + + H
Sbjct: 569 NMGKSVSEMLLQSAPSDPDAYILLSNMCSSNH 600
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 192/605 (31%), Positives = 318/605 (52%), Gaps = 66/605 (10%)
Query: 69 SHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
S DL A +FD P ++LVT+ M+ + G DA+ LF++M+ + D FT
Sbjct: 178 SGDLGSAYKVFDKMPERNLVTWTLMITRFAQL-GCARDAIDLFLDMELSG--YVPDRFTY 234
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE 188
+S L+ C +L + G+QLH+ +++ SL+DMY+KC
Sbjct: 235 SSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAA------------- 281
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE-EGLKLF 247
+G ++ + K F + PE N +SW +I+ YVQ+G+ + E ++LF
Sbjct: 282 ----------------DGSVDDSRKVFEQMPEHN-VMSWTAIITAYVQSGECDKEAIELF 324
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
+M +R N +F+S L AC L + ++++S+ +K G+ S V + ++ +Y +
Sbjct: 325 CKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYAR- 383
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
G ME+AR+ FD L EKN+V + A+ GY
Sbjct: 384 ------------------------------SGRMEDARKAFDILFEKNLVSYNAIVDGYA 413
Query: 368 KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDK 427
K E F L +E + G+ A LL A A+ G++IH +L+ G + ++
Sbjct: 414 KNLKSEEAFLLFNE-IADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQ 472
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
+ + L+ MYS+CGN+ A +F +R+++ + MI +A HG +A+ +F +MLE
Sbjct: 473 CICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLET 532
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEK 547
G KP+ +T+VA+LSA H G + G+K+FNSM ++ I P +HYACM+DL GR+ L +
Sbjct: 533 GTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVE 592
Query: 548 AIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAA 607
A+EF+ S+P DA++ + L CR++ N EL A E +L E ++ A Y+ L+N++A+
Sbjct: 593 AMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHAS 652
Query: 608 EGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGE 667
G W ++ +IRK M+ + AGCSW+ VE+ +H F VG+ SHP+ IY L +
Sbjct: 653 AGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASK 712
Query: 668 LYEIA 672
+ E+
Sbjct: 713 IKEMG 717
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 128/511 (25%), Positives = 235/511 (45%), Gaps = 72/511 (14%)
Query: 45 RKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK-DLVTYNSMLCGYINAEGY 103
RKL E + NT+IS K D + AR +F+ +K DLV++++M+ + N
Sbjct: 50 RKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFAN-NSM 108
Query: 104 EADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV 163
E A+ F++M + +E+ + + C G ++ F+VKT + V
Sbjct: 109 EWQAIWTFLDM--LELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCV 166
Query: 164 S-SLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN 222
LIDM+ K G++ A K F + PE N
Sbjct: 167 GCELIDMFVK-------------------------------GSGDLGSAYKVFDKMPERN 195
Query: 223 DAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIH 282
V+W +I+ + Q G A + + LF+ M +G + T++S LSAC L + K++H
Sbjct: 196 -LVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLH 254
Query: 283 SWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNME 342
S V++ GL + V +VD+Y KC + G+++
Sbjct: 255 SRVIRLGLALDVCVGCSLVDMYAKC----------------------------AADGSVD 286
Query: 343 EARRHFDSLTEKNVVVWTALFSGYVKAQNCEA-LFDLLSEFVTKEGVVTDALILVILLGA 401
++R+ F+ + E NV+ WTA+ + YV++ C+ +L + ++ + + +L A
Sbjct: 287 DSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGH-IRPNHFSFSSVLKA 345
Query: 402 CALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLY 461
C + + G+++++Y +++G+ + ++L+ MY++ G M A F E++LV Y
Sbjct: 346 CGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSY 405
Query: 462 NVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTA 521
N ++ YA + E+A LLF E+ + GI A TF ++LS G++ GE+ +
Sbjct: 406 NAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRL-- 463
Query: 522 DYKISPETDHYAC--MIDLYGRANQLEKAIE 550
K +++ C +I +Y R +E A +
Sbjct: 464 -LKGGYKSNQCICNALISMYSRCGNIEAAFQ 493
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 118/486 (24%), Positives = 199/486 (40%), Gaps = 106/486 (21%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSK---HNLLRESRKLFDEMPERNVFSWNTIISACIKS 69
H + I+ GL L L+ +Y+K + +SRK+F++MPE NV SW II+A
Sbjct: 254 HSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITA---- 309
Query: 70 HDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVT 129
Y+ + + +A++LF +M S HIR + F+ +
Sbjct: 310 ---------------------------YVQSGECDKEAIELFCKMISG--HIRPNHFSFS 340
Query: 130 STLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEE 189
S L C L + G Q++++ VK + +SLI MY++ E+A + F+
Sbjct: 341 SVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFD----- 395
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
L KN VS+N ++ GY +N +EE LF
Sbjct: 396 -ILFEKN---------------------------LVSYNAIVDGYAKNLKSEEAFLLFNE 427
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
+ + G+ + TFAS LS + + ++IH +LK G SN + + ++ +Y +C N
Sbjct: 428 IADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGN 487
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL----TEKNVVVWTALFS- 364
+ A + RN S +SMI G++ G A F + T+ N + + A+ S
Sbjct: 488 IEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSA 547
Query: 365 ---------------------GYV-KAQNCEALFDLLS---------EFVTKEGVVTDAL 393
G V + ++ + DLL EF+ ++ DAL
Sbjct: 548 CSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADAL 607
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF 453
+ LLGAC + G+ IL D L ++++ G I ++
Sbjct: 608 VWRTLLGACRVHGNTELGRHAAEMILEQEPD-DPAAYILLSNLHASAGQWKDVVKIRKSM 666
Query: 454 IERDLV 459
ER+L+
Sbjct: 667 KERNLI 672
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 77/134 (57%), Gaps = 1/134 (0%)
Query: 381 EFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC 440
+ +T++ D ILL +C GK +H +++ G+++D +++TL+ +YSKC
Sbjct: 15 DLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKC 74
Query: 441 GNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
G+ A +IF+ +RDLV ++ M++C+A++ E +AI F +MLE G P+ F A+
Sbjct: 75 GDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAV 134
Query: 500 LSAFRHCGSVEMGE 513
+ A + +GE
Sbjct: 135 IRACSNANYAWVGE 148
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 37/258 (14%)
Query: 261 TFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLK 320
T++ L +C RN + K +H ++++GL + V + ++ +Y KC
Sbjct: 28 TYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKC------------- 74
Query: 321 GVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK-NVVVWTALFSGYV-KAQNCEALFDL 378
G+ E AR F+ + K ++V W+A+ S + + +A++
Sbjct: 75 ------------------GDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTF 116
Query: 379 LSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG-VQMDKKLISTLVDMY 437
L + + G + ++ AC+ G+ I+ ++++ G ++ D + L+DM+
Sbjct: 117 LD--MLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMF 174
Query: 438 SK-CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTF 496
K G++ A +F ER+LV + +MI +A G AI LF +M G PD T+
Sbjct: 175 VKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTY 234
Query: 497 VAILSAFRHCGSVEMGEK 514
++LSA G + +G++
Sbjct: 235 SSVLSACTELGLLALGKQ 252
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 205/599 (34%), Positives = 303/599 (50%), Gaps = 68/599 (11%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
NT+++ K L AR LFD P DLVT+N M+ GY+ G+ +A LF EM SA
Sbjct: 287 NTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQ-NGFMDEASCLFHEMISA-- 343
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
++ D T +S L L + + G+++H ++++ F S+LID+Y KCR
Sbjct: 344 RMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCR----- 398
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
++EMA K F ++ + D V +ISGYV NG
Sbjct: 399 ---------------------------DVEMARKIFDQRTPV-DIVVCTAMISGYVLNGM 430
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
L++F + + +R N T AS L AC GL + KE+H +LKNG + +V S
Sbjct: 431 NNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSA 490
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
I+D+Y KC G ++ A + F +++K+ V W
Sbjct: 491 IMDMYAKC-------------------------------GRLDLAHQTFIGISDKDAVCW 519
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
++ + + E DL + + G D + + L ACA ALH GKEIHA+++
Sbjct: 520 NSMITSCSQNGKPEEAIDLFRQ-MGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMM 578
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
R + D S L+DMYSKCGN+ A +F E++ V +N +IA Y +HG + ++
Sbjct: 579 RGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLN 638
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
LF ML GI+PD VTF+AI+SA H G V+ G YF MT + I +HYACM+DL+
Sbjct: 639 LFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLF 698
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYV 599
GRA +L +A + S+P DA + G+ L CRL+ N ELA A L L+ N YV
Sbjct: 699 GRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYV 758
Query: 600 QLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
L+NV+A G W + +IR M+ + GCSW+ V + H+F D SHP+++ IY
Sbjct: 759 LLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFVAADRSHPQSSQIY 817
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 115/457 (25%), Positives = 197/457 (43%), Gaps = 67/457 (14%)
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
D++T + C L +V GR +H + + F SSLI YS+ C +A +F
Sbjct: 146 DKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLF 205
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
+ R P D V WN +++GYV+NGD +
Sbjct: 206 D--------------------------------RMPS-KDGVLWNVMLNGYVKNGDWDNA 232
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
+F+ M N TFA LS C + ++H V+ +GL + V++ ++ +
Sbjct: 233 TGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAM 292
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y KC G++ +ARR FD + + ++V W +
Sbjct: 293 YAKC-------------------------------GHLFDARRLFDMMPKTDLVTWNGMI 321
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
SGYV+ + L E ++ + D++ L + A L GKEIH YI+R GV
Sbjct: 322 SGYVQNGFMDEASCLFHEMISAR-MKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGV 380
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
+D L S L+D+Y KC ++ A IF D+V+ MI+ Y +G A+ +F
Sbjct: 381 SLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRW 440
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRAN 543
+L++ ++ ++VT ++L A ++ +G++ + + A M D+Y +
Sbjct: 441 LLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIM-DMYAKCG 499
Query: 544 QLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELA 580
+L+ A + I +++DAV S + C N E A
Sbjct: 500 RLDLAHQTFIGI-SDKDAVCWNSMITSCSQNGKPEEA 535
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 125/503 (24%), Positives = 212/503 (42%), Gaps = 84/503 (16%)
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
+ S L C + GRQ HA M+ +G + L+ MY C + +A +F
Sbjct: 49 LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIF---- 104
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
L+ + +P WN +I G+ G + L +
Sbjct: 105 ----------------------YQLRLWCSEP-------WNWMIRGFTMMGQFDFALLFY 135
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
+M G +++TF + AC GL +V + +H + G + FV S
Sbjct: 136 FKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGS--------- 186
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
S+I YS G + +AR FD + K+ V+W + +GYV
Sbjct: 187 ----------------------SLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYV 224
Query: 368 KA---QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
K N +F + T VT A +L + CA + ++ G ++H ++ G++
Sbjct: 225 KNGDWDNATGVFMEMRRTETNPNSVTFACVLSV----CASEIMINFGSQLHGLVVSSGLE 280
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
MD + +TL+ MY+KCG++ A +F + DLV +N MI+ Y +G ++A LF EM
Sbjct: 281 MDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEM 340
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
+ +KPD++TF + L ++ G K + +S + + +ID+Y +
Sbjct: 341 ISARMKPDSITFSSFLPLLSEGATLRQG-KEIHCYIIRNGVSLDVFLKSALIDIYFKCRD 399
Query: 545 LEKAIE-FMKSIPTEE---DAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQ 600
+E A + F + P + A+I G LN +N NA E L+ +A V
Sbjct: 400 VEMARKIFDQRTPVDIVVCTAMISGYVLN--GMNNNA-----LEIFRWLLQERMRANSVT 452
Query: 601 LANVYAAEGNWAEMGRIRKQMRG 623
LA+V A A + + K++ G
Sbjct: 453 LASVLPACAGLAAL-TLGKELHG 474
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 212/663 (31%), Positives = 323/663 (48%), Gaps = 79/663 (11%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H ++ G N L+ +YS+ L ++RK+FDEM +V SWN+II + K
Sbjct: 150 HALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKL--- 206
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
G AL++F M + + R D T+ + L
Sbjct: 207 -----------------------------GKPKVALEMFSRMTN-EFGCRPDNITLVNVL 236
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C L G+QLH F V + + F + L+DMY+KC +EA VF + + ++
Sbjct: 237 PPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK-DV 295
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELN---DAVSWNTLISGYVQNGDAEEGLKLFVR 249
+S NAMVA + G E A++ F + E D V+W+ ISGY Q G E L + +
Sbjct: 296 VSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQ 355
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVL-------KNGLISNPFVSSGIVD 302
M +G++ NE T S LS C + + KEIH + + KNG V + ++D
Sbjct: 356 MLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLID 415
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT--EKNVVVWT 360
+Y KC+ ++ A +M FDSL+ E++VV WT
Sbjct: 416 MYAKCKKVDTARAM-------------------------------FDSLSPKERDVVTWT 444
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKE-GVVTDALILVILLGACALQAALHPGKEIHAYIL 419
+ GY + + +LLSE ++ +A + L ACA AAL GK+IHAY L
Sbjct: 445 VMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYAL 504
Query: 420 RMGVQMDKKLIST-LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
R +S L+DMY+KCG+++ A ++F N + ++ V + ++ Y HG+ E+A+
Sbjct: 505 RNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEAL 564
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
+F+EM G K D VT + +L A H G ++ G +YFN M + +SP +HYAC++DL
Sbjct: 565 GIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDL 624
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARY 598
GRA +L A+ ++ +P E V+ +FL+ CR++ EL A EK+ L N+ Y
Sbjct: 625 LGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSY 684
Query: 599 VQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
L+N+YA G W ++ RIR MR + GCSWV F VGD +HP IY
Sbjct: 685 TLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIY 744
Query: 659 SVL 661
VL
Sbjct: 745 QVL 747
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 144/506 (28%), Positives = 232/506 (45%), Gaps = 57/506 (11%)
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTY--NSMLCGYINAEGYEADALKLFIEMQSADE 119
+IS I L A SL P D Y NS++ Y G L LF M S
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSY-GDNGCANKCLYLFGLMHSLS- 122
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
D +T C ++ +V G HA + T ++ F ++L+ MYS+CR +A
Sbjct: 123 -WTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDA 181
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
+VF+ EM++ W D VSWN++I Y + G
Sbjct: 182 RKVFD------------------------EMSV---W------DVVSWNSIIESYAKLGK 208
Query: 240 AEEGLKLFVRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
+ L++F RM E G R + T + L C L K++H + + + +I N FV +
Sbjct: 209 PKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGN 268
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK---- 354
+VD+Y KC M+ A ++ V++ S ++M+ GYS G E+A R F+ + E+
Sbjct: 269 CLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKM 328
Query: 355 NVVVWTALFSGYV-KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
+VV W+A SGY + EAL + + G+ + + L+ +L CA AL GKE
Sbjct: 329 DVVTWSAAISGYAQRGLGYEALG--VCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKE 386
Query: 414 IHAYILRMGVQMDKK-------LISTLVDMYSKCGNMTYAEIIFQNFI--ERDLVLYNVM 464
IH Y ++ + + K +I+ L+DMY+KC + A +F + ERD+V + VM
Sbjct: 387 IHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVM 446
Query: 465 IACYAHHGHEEKAILLFEEMLEKG--IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTAD 522
I Y+ HG KA+ L EM E+ +P+A T L A ++ +G++ +
Sbjct: 447 IGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRN 506
Query: 523 YKISPETDHYACMIDLYGRANQLEKA 548
+ + C+ID+Y + + A
Sbjct: 507 QQNAVPLFVSNCLIDMYAKCGSISDA 532
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLY--NVMIACYA 469
K IH +L G+ + L S L+ Y G +++A + + F D +Y N +I Y
Sbjct: 45 KLIHQKLLSFGI-LTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYG 103
Query: 470 HHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
+G K + LF M PD TF + A SV GE
Sbjct: 104 DNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGE 147
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 189/651 (29%), Positives = 343/651 (52%), Gaps = 39/651 (5%)
Query: 9 ALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIK 68
A+ H K G + T N ++ +Y K + + +F ++ ++F WN++I +
Sbjct: 165 AIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQ 224
Query: 69 SHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
+ +A +F+ P +D V++N+++ + G+ L +F+EM ++ + T
Sbjct: 225 MYGPYKALQIFNRMPERDEVSWNTLI-SIFSQHGFGVQCLAMFVEM--CNQGFSPNFMTY 281
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE 188
S L+ C ++ +G LHA +++ + + LIDMY+KC C + A RVF+ E
Sbjct: 282 GSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLRE 341
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
+D +SWN+LI+G V G E+ L LF
Sbjct: 342 ---------------------------------HDHISWNSLITGVVHFGLGEDALILFN 368
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
+M + V +E + L C G + +H + +K+G+ S+ V + I+ +Y KC
Sbjct: 369 QMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCG 428
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
+ + A+ + L +RN+ S ++MI +S G++ +AR +FD + E+N+V W ++ S YV+
Sbjct: 429 DTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQ 488
Query: 369 AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK 428
E L + GV D + + ACA A + G ++ + + G+ ++
Sbjct: 489 NGFSEEGLKLYVS-MRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVS 547
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
+ +++V MYS+CG + A+ F + ++DL+ +N M+A +A +G K I FE+ML+
Sbjct: 548 VANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTE 607
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
KP+ +++V++LS H G V G+ YF+SMT + ISP +H++CM+DL GRA LE+A
Sbjct: 608 CKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQA 667
Query: 549 IEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAE 608
+ ++ +P + +A + + L CR++ + LA A +KL+ L+ YV L+N+Y+
Sbjct: 668 KDLIEGMPFKPNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNMYSES 727
Query: 609 GNWAEMGRIRKQMRGMKGNRFA-GCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
G + +RK M+ +KG R + GCSW+ V++ +H+FTV + SHP+ +Y
Sbjct: 728 GELDNVADMRKLMK-VKGIRTSRGCSWIEVDNRVHVFTVDETSHPQIKEVY 777
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 156/582 (26%), Positives = 262/582 (45%), Gaps = 71/582 (12%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H Q I +GL + N L+H+YS L ++ ++F E RN+F+WNT+I A + S +
Sbjct: 31 HAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVSSSRM 90
Query: 73 KQARSLFDSSP--HKDLVTYNSMLCGYINAEGYEADALKLFIEM--QSADEHIRMDEFTV 128
A LFD P KD V++ +M+ GY + G+ + + + F M + D D F+
Sbjct: 91 SDAEKLFDEMPVRVKDSVSWTTMISGY-SQNGFHSRSFETFSLMIRDTNDGGKNYDPFSF 149
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE 188
TS + C L + QLHA + K +S++ MY KC + A VF E
Sbjct: 150 TSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFD-IE 208
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
+L N+M+ + AL+ F R PE D VSWNTLIS + Q+G + L +FV
Sbjct: 209 RPSLFCWNSMIYGYSQMYGPYKALQIFNRMPE-RDEVSWNTLISIFSQHGFGVQCLAMFV 267
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
M G N T+ S LSAC ++K +H+ +L+ + +G++D+Y KC
Sbjct: 268 EMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKC- 326
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
G ++ A+R F SL E + + W +L +G V
Sbjct: 327 ------------------------------GCLDLAKRVFKSLREHDHISWNSLITGVVH 356
Query: 369 AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK 428
E L ++ + + VV D IL +LG C+ G+ +H Y ++ G+
Sbjct: 357 FGLGEDALILFNQ-MRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAP 415
Query: 429 LISTLVDMYSKCGNMTYAEIIF-----QNFI--------------------------ERD 457
+ + ++ MY+KCG+ A+++F +N I ER+
Sbjct: 416 VGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERN 475
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFN 517
+V +N M++ Y +G E+ + L+ M G++PD +TF + A V++G +
Sbjct: 476 IVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVT 535
Query: 518 SMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE 559
T + +S ++ +Y R +++A SI ++
Sbjct: 536 HATK-FGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKD 576
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 128/470 (27%), Positives = 214/470 (45%), Gaps = 54/470 (11%)
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
R+LHA ++ + D+S F +++L+ MYS C +A +VF+ T N+ + N M+ A
Sbjct: 27 ARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQE-THHRNIFTWNTMIRALV 85
Query: 204 REGEMEMALKTFWRQP-ELNDAVSWNTLISGYVQNGDAEEGLKLFVRM----GENGVRWN 258
M A K F P + D+VSW T+ISGY QNG + F M + G ++
Sbjct: 86 SSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYD 145
Query: 259 EHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLL 318
+F S + AC L + + A ++H+ V K G + + +V +Y KC +++ AE++
Sbjct: 146 PFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFF 205
Query: 319 LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL---FSGYVKAQNCEAL 375
+ F +SMI GYS +A + F+ + E++ V W L FS + C A+
Sbjct: 206 DIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAM 265
Query: 376 FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVD 435
F + +G + + +L ACA + L G +HA ILRM +D + L+D
Sbjct: 266 FVEM----CNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLID 321
Query: 436 MYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM----------- 484
MY+KCG + A+ +F++ E D + +N +I H G E A++LF +M
Sbjct: 322 MYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFI 381
Query: 485 ------------------------LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
++ G+ A AI++ + CG + + F M
Sbjct: 382 LPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMP 441
Query: 521 ADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNV 570
IS + MI + R+ + KA + +P E + V S L+
Sbjct: 442 LRNTIS-----WTAMITAFSRSGDIGKARGYFDMMP-ERNIVTWNSMLST 485
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Query: 409 HPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACY 468
H +++HA ++ G+ L++ L+ MYS CG A +FQ R++ +N MI
Sbjct: 25 HIARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRAL 84
Query: 469 AHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTAD 522
A LF+EM + D+V++ ++S + G + F+ M D
Sbjct: 85 VSSSRMSDAEKLFDEMPVR--VKDSVSWTTMISGYSQNGFHSRSFETFSLMIRD 136
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 206/675 (30%), Positives = 338/675 (50%), Gaps = 78/675 (11%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTI 62
S N E++ Q ++ G+ + T + ++ ++ + E R++ + + S+NT+
Sbjct: 229 SGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTV 288
Query: 63 ISACIK----SHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSAD 118
+++ I ++ A+ LFD +D++++NSM+ GY+ G + +++FI+M
Sbjct: 289 VNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVK-NGLDDRGIEIFIKMLVFG 347
Query: 119 EHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSN-DASGFAVSSLIDMYSKCRCYE 177
+ +D T+ + C + + G+ LH++ +K + D ++L+DMYSKC
Sbjct: 348 --VDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLN 405
Query: 178 EACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQN 237
A RVFE E+ VSW ++I+GYV+
Sbjct: 406 SAIRVFERMDEKT---------------------------------VVSWTSMITGYVRE 432
Query: 238 GDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVS 297
G ++ +KLF M GV + + S L+AC N+K K +H ++ +N L +N FVS
Sbjct: 433 GLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVS 492
Query: 298 SGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVV 357
+ + D+Y KC G+M++A F + +K+V+
Sbjct: 493 NALTDMYAKC-------------------------------GSMKDAHDVFSHMKKKDVI 521
Query: 358 VWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
W + GY K L +E + D + +L ACA AAL G+EIH Y
Sbjct: 522 SWNTMIGGYTKNSLPNEALTLFAEMQRESK--PDGTTVACILPACASLAALDKGREIHGY 579
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
LR G DK + + +VDMY KCG + A +F +DLV + VMIA Y HG+ +A
Sbjct: 580 ALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEA 639
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID 537
I F +M GI+PD V+F++IL A H G ++ G K FN M + +I P +HYACM+D
Sbjct: 640 INTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVD 699
Query: 538 LYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKAR 597
L R L KA +F+K++P + DA I G+ L CR++ + +LA + E++ LE N
Sbjct: 700 LLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGY 759
Query: 598 YVQLANVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTN 655
YV LAN+YA W E+ ++RK++ RG+K N GCSW+ ++ +I+IF GD S P+
Sbjct: 760 YVLLANIYAEAEKWEEVQKLRKKIGQRGLKKN--PGCSWIEIKGKINIFVAGDCSKPQAK 817
Query: 656 AIYSVLAIFTGELYE 670
I +L ++ E
Sbjct: 818 KIELLLKRLRSKMKE 832
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/455 (25%), Positives = 200/455 (43%), Gaps = 85/455 (18%)
Query: 104 EADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV 163
E LK +E+ + ++ D S L LC + ++ GR++ + + + G
Sbjct: 129 EVGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILG 188
Query: 164 SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELND 223
L+ MY KC +E VF+ +E K F
Sbjct: 189 VKLVFMYVKCGDLKEGRMVFDKLSES-----------------------KIFL------- 218
Query: 224 AVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHS 283
WN +IS Y +G+ E + LF +M E G++ N +TF+S L + V+ +++H
Sbjct: 219 ---WNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHG 275
Query: 284 WVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFS--ISSMIVGYSLQGNM 341
+ K G NS++ ++S+I Y + +
Sbjct: 276 LICKLGF---------------------------------NSYNTVVNSLISFYFVGRKV 302
Query: 342 EEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKE---GVVTDALILVIL 398
A++ FD LT+++V+ W ++ SGYVK L D E K GV D +V +
Sbjct: 303 RCAQKLFDELTDRDVISWNSMISGYVK----NGLDDRGIEIFIKMLVFGVDIDLATMVNV 358
Query: 399 LGACALQAALHPGKEIHAYILRMG-VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD 457
ACA L GK +H+Y ++ + + + +TL+DMYSKCG++ A +F+ E+
Sbjct: 359 FVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKT 418
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFN 517
+V + MI Y G + AI LF+EM +G+ PD +IL+A G+++ G+
Sbjct: 419 VVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGK---- 474
Query: 518 SMTADY--KISPETDHYA--CMIDLYGRANQLEKA 548
+ DY + + ET+ + + D+Y + ++ A
Sbjct: 475 -IVHDYIRENNLETNSFVSNALTDMYAKCGSMKDA 508
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 205/600 (34%), Positives = 313/600 (52%), Gaps = 41/600 (6%)
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
SA +S D+ A SLF+S +L +NSM+ G ++ A AL F+ M + +
Sbjct: 71 SAVSRSGDISYAISLFNSIEEPNLFIWNSMIRG-LSMSLSPALALVFFVRMIYSG--VEP 127
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
+ +T L C KL + G+Q+HA ++K + F +SLI+MY++ A VF
Sbjct: 128 NSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVF 187
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
+ + IS A++A G M+ A + F P + D VSWN +I+GY Q G ++E
Sbjct: 188 DQSNFR-DAISFTALIAGYALWGYMDRARQLFDEMP-VKDVVSWNAMIAGYAQMGRSKEA 245
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
L LF M + V NE T S LSAC + + SW+ GL SN + + ++D+
Sbjct: 246 LLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDM 305
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y KC G+++ AR FD + E++V+ W +
Sbjct: 306 YSKC-------------------------------GDLQTARELFDDMLERDVISWNVMI 334
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
GY + + L E + GV + + +L +CA A+ GK IHAYI +
Sbjct: 335 GGYTHMCSYKEALALFREMLAS-GVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFN 393
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
+ L ++L+D+Y+KCGN+ A +F + L +N MI A HG +KA LF +
Sbjct: 394 SVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSK 453
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRAN 543
M GI+P+ +TFV ILSA +H G V++G+++F+SM DYKISP++ HY CMIDL GRA
Sbjct: 454 MSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAG 513
Query: 544 QLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLAN 603
E+A ++++ + D I GS L CR + EL E+L LE +N YV L+N
Sbjct: 514 LFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSN 573
Query: 604 VYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+YA G W ++ RIR ++ RGMK + GC+ + V++ +H F VGD HP++ IY +L
Sbjct: 574 IYAGAGKWDDVARIRTRLNDRGMK--KVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRML 631
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 207/385 (53%), Gaps = 34/385 (8%)
Query: 130 STLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEE 189
+L L K ++ +Q+HA ++KT + FA+S LI+
Sbjct: 31 PSLKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEF-------------------- 70
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
+A R G++ A+ F E N + WN++I G + L FVR
Sbjct: 71 ----------SAVSRSGDISYAISLFNSIEEPNLFI-WNSMIRGLSMSLSPALALVFFVR 119
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
M +GV N +TF L +C L + K+IH+ VLK G +S+ F+ + ++++Y +
Sbjct: 120 MIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGE 179
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK- 368
MN A+ + R++ S +++I GY+L G M+ AR+ FD + K+VV W A+ +GY +
Sbjct: 180 MNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQM 239
Query: 369 AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK 428
++ EAL LL E + K V + +V +L ACA AL G + ++I G+ + K
Sbjct: 240 GRSKEAL--LLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLK 297
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
L++ L+DMYSKCG++ A +F + +ERD++ +NVMI Y H ++A+ LF EML G
Sbjct: 298 LVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASG 357
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGE 513
++P +TF++IL + H G++++G+
Sbjct: 358 VEPTEITFLSILPSCAHLGAIDLGK 382
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 116/491 (23%), Positives = 214/491 (43%), Gaps = 72/491 (14%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K G LI++Y++ + ++ +FD+ R+ S+ +I+ +
Sbjct: 152 HAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYM 211
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+AR LFD P KD+V++N+M+ GY G +AL LF +M+ A+ + +E T+ S L
Sbjct: 212 DRARQLFDEMPVKDVVSWNAMIAGYAQM-GRSKEALLLFEDMRKAN--VPPNESTIVSVL 268
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C + + G + +++ ++ V++LIDMYSKC + A +F+ E
Sbjct: 269 SACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLER--- 325
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
D +SWN +I GY +E L LF M
Sbjct: 326 ------------------------------DVISWNVMIGGYTHMCSYKEALALFREMLA 355
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+GV E TF S L +C L + K IH+++ KN + +S+ ++D+Y KC
Sbjct: 356 SGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKC----- 410
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
GN+ AR+ FD + K++ W A+ G
Sbjct: 411 --------------------------GNIVAARQVFDGMKIKSLASWNAMICGLAMHGQA 444
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR-MGVQMDKKLIS 431
+ F+L S+ ++ +G+ + + V +L AC + G++ + +++ + +
Sbjct: 445 DKAFELFSK-MSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYG 503
Query: 432 TLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
++D+ + G AE + QN ++ D ++ ++ HG E L+ E + E ++
Sbjct: 504 CMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFE--LE 561
Query: 491 PDAVTFVAILS 501
PD +LS
Sbjct: 562 PDNPGAYVLLS 572
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 208/658 (31%), Positives = 326/658 (49%), Gaps = 95/658 (14%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQ----------- 74
+ ++L+ +Y LRE R++FD++ VF WN +++ K + ++
Sbjct: 137 VLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMREL 196
Query: 75 -------ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFT 127
AR LFD +D++++NSM+ GY+ + G L LF +M I D T
Sbjct: 197 GIRRVESARKLFDELGDRDVISWNSMISGYV-SNGLSEKGLDLFEQMLLLG--INTDLAT 253
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
+ S + C + GR LH + +K S + L+DMYSK A +VFE
Sbjct: 254 MVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMG 313
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
E VSW ++I+GY + G ++ ++LF
Sbjct: 314 ER---------------------------------SVVSWTSMIAGYAREGLSDMSVRLF 340
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
M + G+ + T + L AC ++ K++H+++ +N + S+ FVS+ ++D+Y KC
Sbjct: 341 HEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKC 400
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
G+M +A F + K++V W + GY
Sbjct: 401 -------------------------------GSMGDAHSVFSEMQVKDIVSWNTMIGGYS 429
Query: 368 KAQNCEALFDLLSE--FVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
K +L E + +K +T A IL ACA AAL G+EIH +ILR G +
Sbjct: 430 KNSLPNEALNLFVEMQYNSKPNSITMACILP----ACASLAALERGQEIHGHILRNGFSL 485
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
D+ + + LVDMY KCG + A ++F E+DLV + VMIA Y HG+ +AI F EM
Sbjct: 486 DRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMR 545
Query: 486 EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQL 545
GI+PD V+F++IL A H G ++ G +FN M + I P+++HYAC++DL RA L
Sbjct: 546 NSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNL 605
Query: 546 EKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVY 605
KA +F+K +P E DA I G+ L CR+ + +LA + E + LE N YV LAN+Y
Sbjct: 606 SKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIY 665
Query: 606 AAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
A W E+ ++R+++ RG++ N GCSW+ ++ ++HIF GD SHP N I +L
Sbjct: 666 AEAEKWEEVKKLRERIGRRGLRKN--PGCSWIEIKGKVHIFVTGDSSHPLANKIELLL 721
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 129/493 (26%), Positives = 216/493 (43%), Gaps = 58/493 (11%)
Query: 87 LVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQ 146
+ YN +C + G A++L + D +R T S L LC L ++ GR+
Sbjct: 68 ITDYNIEICRFCEL-GNLRRAMELINQSPKPDLELR----TYCSVLQLCADLKSIQDGRR 122
Query: 147 LHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREG 206
+H+ + + G S L+ MY C E R+F+ E + N ++ + G
Sbjct: 123 IHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANE-KVFLWNLLMNGYAKIG 181
Query: 207 EMEMALKTFWRQPELN-----------------DAVSWNTLISGYVQNGDAEEGLKLFVR 249
+L F R EL D +SWN++ISGYV NG +E+GL LF +
Sbjct: 182 NFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQ 241
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
M G+ + T S ++ C + + +H + +K +++ ++D+Y K N
Sbjct: 242 MLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGN 301
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
+N A + G R+ S +SMI GY+ +G + + R F +
Sbjct: 302 LNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEM------------------ 343
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
KEG+ D + +L ACA L GK++H YI +Q D +
Sbjct: 344 --------------EKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFV 389
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+ L+DMY+KCG+M A +F +D+V +N MI Y+ + +A+ LF EM +
Sbjct: 390 SNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEM-QYNS 448
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
KP+++T IL A ++E G++ + + S + ++D+Y + L A
Sbjct: 449 KPNSITMACILPACASLAALERGQEIHGHILRN-GFSLDRHVANALVDMYLKCGALGLAR 507
Query: 550 EFMKSIPTEEDAV 562
IP E+D V
Sbjct: 508 LLFDMIP-EKDLV 519
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 170/374 (45%), Gaps = 24/374 (6%)
Query: 261 TFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLK 320
T+ S L C L++++ + IHS + N + + + S +V +Y C ++ +
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162
Query: 321 GVRNSFSISSMIVGYSLQGN------------------MEEARRHFDSLTEKNVVVWTAL 362
F + ++ GY+ GN +E AR+ FD L +++V+ W ++
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSM 222
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
SGYV E DL + + G+ TD +V ++ C+ L G+ +H Y ++
Sbjct: 223 ISGYVSNGLSEKGLDLFEQMLLL-GINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKAS 281
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
+ L + L+DMYSK GN+ A +F+ ER +V + MIA YA G + ++ LF
Sbjct: 282 FGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFH 341
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRA 542
EM ++GI PD T IL A G +E G+ N + + K+ + ++D+Y +
Sbjct: 342 EMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKEN-KMQSDLFVSNALMDMYAKC 400
Query: 543 NQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLA 602
+ A S+ +E + S+ + L EA + ++ N+K + +A
Sbjct: 401 GSMGDA----HSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNSKPNSITMA 456
Query: 603 NVYAAEGNWAEMGR 616
+ A + A + R
Sbjct: 457 CILPACASLAALER 470
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 108/256 (42%), Gaps = 41/256 (16%)
Query: 18 KAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPER----NVFSWNTIISACIKSHDLK 73
K G++ T ++H + LL + + + + E ++F N ++ K +
Sbjct: 345 KEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMG 404
Query: 74 QARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLN 133
A S+F KD+V++N+M+ GY + +AL LF+EMQ + + T+ L
Sbjct: 405 DAHSVFSEMQVKDIVSWNTMIGGY-SKNSLPNEALNLFVEMQYNS---KPNSITMACILP 460
Query: 134 LCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLI 193
C L + G+++H +++ ++L+DMY KC
Sbjct: 461 ACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKC-------------------- 500
Query: 194 SKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGEN 253
G + +A F PE D VSW +I+GY +G E + F M +
Sbjct: 501 ------------GALGLARLLFDMIPE-KDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNS 547
Query: 254 GVRWNEHTFASALSAC 269
G+ +E +F S L AC
Sbjct: 548 GIEPDEVSFISILYAC 563
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 211/663 (31%), Positives = 325/663 (49%), Gaps = 81/663 (12%)
Query: 20 GLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPER---NVFSWNTIISACIKSHDLKQAR 76
G N L+ +YS+ L E+ +FDE+ +R +V SWN+I+SA +KS + A
Sbjct: 192 GFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTAL 251
Query: 77 SLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCV 136
LF + L + + +E R D ++ + L C
Sbjct: 252 DLFSK--------------------------MTLIVHEKPTNE--RSDIISIVNILPACG 283
Query: 137 KLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKN 196
L V +++H ++ F ++LID Y+KC E A +VF E +++S N
Sbjct: 284 SLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFN-MMEFKDVVSWN 342
Query: 197 AMVAACCREGEMEMALKTFWRQPELN---DAVSWNTLISGYVQNGDAEEGLKLFVRMGEN 253
AMVA + G E A + F + N D V+W +I+GY Q G + E L LF +M +
Sbjct: 343 AMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFS 402
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS--NPF--------VSSGIVDV 303
G N T S LSAC L EIH++ LKN L++ N F V + ++D+
Sbjct: 403 GSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDM 462
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFD--SLTEKNVVVWTA 361
Y KC + A S+ FD L E+NVV WT
Sbjct: 463 YSKCRSFKAARSI-------------------------------FDDIPLEERNVVTWTV 491
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKE-GVVTDALILVILLGACALQAALHPGKEIHAYILR 420
+ G+ + + L E +++ GV +A + +L ACA AA+ GK+IHAY+LR
Sbjct: 492 MIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR 551
Query: 421 MGVQMDKK--LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
+ + L+DMYSKCG++ A +F + ++ + + M+ Y HG +A+
Sbjct: 552 HHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEAL 611
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
+F++M + G PD +TF+ +L A HCG V+ G YF+SM+ADY ++P +HYAC IDL
Sbjct: 612 DIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDL 671
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARY 598
R+ +L+KA +K +P E AV+ + L+ CR++ N ELA A KL+ + N Y
Sbjct: 672 LARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSY 731
Query: 599 VQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
++N+YA G W ++ RIR M+ + GCSWV + F VGD SHP + IY
Sbjct: 732 TLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIY 791
Query: 659 SVL 661
++L
Sbjct: 792 ALL 794
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 124/459 (27%), Positives = 212/459 (46%), Gaps = 56/459 (12%)
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
R D FT+ L C +L + G H + +++ F ++L+ MYS+C EEA
Sbjct: 159 RPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASM 218
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F+ T Q ++D +SWN+++S +V++ +A
Sbjct: 219 IFDEIT------------------------------QRGIDDVISWNSIVSAHVKSSNAW 248
Query: 242 EGLKLFVRMG------ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF 295
L LF +M R + + + L AC L+ V KE+H ++NG + F
Sbjct: 249 TALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVF 308
Query: 296 VSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKN 355
V + ++D Y KC M A + + ++ S ++M+ GYS GN E A F ++ ++N
Sbjct: 309 VGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKEN 368
Query: 356 ----VVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG 411
VV WTA+ +GY + +L + + G + + + ++ +L ACA A G
Sbjct: 369 IPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIF-SGSLPNCVTIISVLSACASLGAFSQG 427
Query: 412 KEIHAYILRM----------GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFI--ERDLV 459
EIHAY L+ G D + + L+DMYSKC + A IF + ER++V
Sbjct: 428 TEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVV 487
Query: 460 LYNVMIACYAHHGHEEKAILLFEEMLEK--GIKPDAVTFVAILSAFRHCGSVEMGEKYFN 517
+ VMI +A +G A+ LF EM+ + G+ P+A T IL A H ++ +G++
Sbjct: 488 TWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHA 547
Query: 518 SMTADYKISPETDHYA-CMIDLYGRANQLEKAIEFMKSI 555
+ ++ A C+ID+Y + ++ A S+
Sbjct: 548 YVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSM 586
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 143/564 (25%), Positives = 239/564 (42%), Gaps = 126/564 (22%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H AI+ G N LI Y+K L+ + K+F+ M ++V SWN +++ +S +
Sbjct: 295 HGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNF 354
Query: 73 KQARSLFDSSPHK----DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
+ A LF + + D+VT+ +++ GY + G +AL LF +M + + T+
Sbjct: 355 EAAFELFKNMRKENIPLDVVTWTAVIAGY-SQRGCSHEALNLFRQMIFSGS--LPNCVTI 411
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKT-----SNDASG-----FAVSSLIDMYSKCRCYEE 178
S L+ C L G ++HA+ +K ND G ++LIDMYSKCR ++
Sbjct: 412 ISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKA 471
Query: 179 ACRVFEGCT-EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQN 237
A +F+ EE N+++ M I G+ Q
Sbjct: 472 ARSIFDDIPLEERNVVTWTVM--------------------------------IGGHAQY 499
Query: 238 GDAEEGLKLFVRMGEN--GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI--SN 293
GD+ + LKLFV M GV N +T + L AC L ++ K+IH++VL++ S
Sbjct: 500 GDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSA 559
Query: 294 PFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
FV++ ++D+Y KC +++ A + +++ S +SM+ GY + G EA FD +
Sbjct: 560 YFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKM-- 617
Query: 354 KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
K G V D + +++L AC+
Sbjct: 618 ------------------------------RKAGFVPDDITFLVVLYACS---------- 637
Query: 414 IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH 473
H ++ G +S M + G AE Y I A G
Sbjct: 638 -HCGMVDQG-------LSYFDSMSADYGLTPRAE------------HYACAIDLLARSGR 677
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD-HY 532
+KA ++M ++P AV +VA+LSA R +VE+ E N + +++ E D Y
Sbjct: 678 LDKAWRTVKDM---PMEPTAVVWVALLSACRVHSNVELAEHALNKLV---EMNAENDGSY 731
Query: 533 ACMIDLY---GRANQLEKAIEFMK 553
+ ++Y GR + + MK
Sbjct: 732 TLISNIYATAGRWKDVARIRHLMK 755
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 139/306 (45%), Gaps = 39/306 (12%)
Query: 222 NDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEI 281
+ AV WN LI +++ G + + + RM G R + T L AC L + +C
Sbjct: 125 SPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAF 184
Query: 282 HSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNM 341
H + NG SN F+ + +V +Y +C G++
Sbjct: 185 HGLICCNGFESNVFICNALVAMYSRC-------------------------------GSL 213
Query: 342 EEARRHFDSLTEK---NVVVWTALFSGYVKAQNCEALFDLLSE--FVTKEGVV---TDAL 393
EEA FD +T++ +V+ W ++ S +VK+ N DL S+ + E +D +
Sbjct: 214 EEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDII 273
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF 453
+V +L AC A+ KE+H +R G D + + L+D Y+KCG M A +F
Sbjct: 274 SIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMM 333
Query: 454 IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
+D+V +N M+A Y+ G+ E A LF+ M ++ I D VT+ A+++ + G
Sbjct: 334 EFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEAL 393
Query: 514 KYFNSM 519
F M
Sbjct: 394 NLFRQM 399
>gi|195647336|gb|ACG43136.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 788
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 206/648 (31%), Positives = 342/648 (52%), Gaps = 12/648 (1%)
Query: 24 TTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP 83
++ T + ++ + K + +R+LF MPE++V S+ T++ A +K ++ A L++ P
Sbjct: 148 SSFTYDFMVSEHVKAGDIASARRLFYGMPEKSVVSYTTMVDALMKRGSVRDAVELYERCP 207
Query: 84 HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGF 143
+ + +M+ G++ E ++ DA +F +M + +R + T+ + CV
Sbjct: 208 LHSVAFFTAMISGFVRNELHK-DAFPVFRKMLTCS--VRPNVVTLICVIKACVGAGEFDL 264
Query: 144 GRQLHAFMVKTSNDASGFAV-SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAAC 202
+ VK + V +SLI +Y + A RVF+ E +++S A++
Sbjct: 265 AMGVVGLAVKCNLFEKSIEVHNSLITLYLRMGDAAAAHRVFDD-MEVRDVVSWTALLDVY 323
Query: 203 CREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTF 262
G++ A + P N+ VSW TLI+ + Q GD E LKL+ +M +G R N F
Sbjct: 324 ADLGDLYGARRVLDAMPARNE-VSWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISCF 382
Query: 263 ASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGV 322
+S LSAC L++++ IH+ LK G +N FVSS ++D+YCKC+ YA+ +
Sbjct: 383 SSVLSACATLQDLRGGTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLPE 442
Query: 323 RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF 382
+N+ +S+I GYS G M EA F+ + +N V W + SGY + + D L+ F
Sbjct: 443 KNTVCWNSLISGYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENRR---FGDALNYF 499
Query: 383 --VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC 440
+ G + + L +L ACA +L G+ +HA I+++G++ + + + L DMY+K
Sbjct: 500 YAMLASGHIPGEITLSSVLLACANLCSLEMGRMVHAEIVKLGIEDNIFMGTALSDMYAKS 559
Query: 441 GNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAIL 500
G++ + +F E++ + + M+ A +G E++I LFE+M+E GI P+ TF+AIL
Sbjct: 560 GDLDSSRRVFYQMPEKNNITWTAMVQGLAENGFAEESISLFEDMIENGIAPNEHTFLAIL 619
Query: 501 SAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEED 560
A HCG VE YF +M A + I P++ HY CM+D+ RA L +A E + + +E D
Sbjct: 620 FACSHCGLVEQAIHYFETMQA-HGIPPKSKHYTCMVDVLARAGCLPEAEELLMKVSSELD 678
Query: 561 AVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQ 620
S L+ C RN E+ A +KL LE +N A YV L+N+YA+ G W + R
Sbjct: 679 TSSWSSLLSACSTYRNKEIGERAAKKLHELEKDNTAGYVLLSNMYASCGKWKDAAETRIL 738
Query: 621 MRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
M+G + AGCSW+ + + H F HP + IY +L + EL
Sbjct: 739 MQGASLKKDAGCSWLQLRGQYHAFFSWKEKHPLSLEIYEILDLLMLEL 786
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 168/352 (47%), Gaps = 41/352 (11%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L+ H A+K G + ++ LI +Y K ++++F+ +PE+N WN++IS
Sbjct: 394 DLRGGTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLPEKNTVCWNSLIS 453
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
+ + +A LF+ P ++ V++N+M+ GY + DAL F M A HI
Sbjct: 454 GYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRF-GDALNYFYAML-ASGHIP-G 510
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
E T++S L C L ++ GR +HA +VK + + F ++L DMY+K
Sbjct: 511 EITLSSVLLACANLCSLEMGRMVHAEIVKLGIEDNIFMGTALSDMYAK------------ 558
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
G+++ + + F++ PE N+ ++W ++ G +NG AEE +
Sbjct: 559 --------------------SGDLDSSRRVFYQMPEKNN-ITWTAMVQGLAENGFAEESI 597
Query: 245 KLFVRMGENGVRWNEHTFASALSAC--CGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
LF M ENG+ NEHTF + L AC CGL V+ A + +G+ + +VD
Sbjct: 598 SLFEDMIENGIAPNEHTFLAILFACSHCGL--VEQAIHYFETMQAHGIPPKSKHYTCMVD 655
Query: 303 VYCKCENMNYAESMLL-LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
V + + AE +L+ + ++ S SS++ S N E R L E
Sbjct: 656 VLARAGCLPEAEELLMKVSSELDTSSWSSLLSACSTYRNKEIGERAAKKLHE 707
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/357 (19%), Positives = 147/357 (41%), Gaps = 73/357 (20%)
Query: 281 IHSWVLKNGLISNPFVSSGIVDVYC---KCENMNYAESMLLLKGVRNSFSISSMIVGYSL 337
+H+ ++GL ++ V+S ++ Y + + + A + +SF+ M+ +
Sbjct: 102 LHAHAFRSGLTADRSVASNLLTAYAAFTRAADRDQAFRDCVAADAASSFTYDFMVSEHVK 161
Query: 338 QGNMEEARRHFDSLTEKNVVVWT-------------------------------ALFSGY 366
G++ ARR F + EK+VV +T A+ SG+
Sbjct: 162 AGDIASARRLFYGMPEKSVVSYTTMVDALMKRGSVRDAVELYERCPLHSVAFFTAMISGF 221
Query: 367 VKAQNCEALFDLLSEFVT---KEGVVTDALILVILLGACALQAAL------------HPG 411
V+ + + F + + +T + VVT ++ +GA A+
Sbjct: 222 VRNELHKDAFPVFRKMLTCSVRPNVVTLICVIKACVGAGEFDLAMGVVGLAVKCNLFEKS 281
Query: 412 KEIHAYILRMGVQM----------------DKKLISTLVDMYSKCGNMTYAEIIFQNFIE 455
E+H ++ + ++M D + L+D+Y+ G++ A +
Sbjct: 282 IEVHNSLITLYLRMGDAAAAHRVFDDMEVRDVVSWTALLDVYADLGDLYGARRVLDAMPA 341
Query: 456 RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK- 514
R+ V + +IA + G +A+ L+ +ML G +P+ F ++LSA + G +
Sbjct: 342 RNEVSWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISCFSSVLSACATLQDLRGGTRI 401
Query: 515 YFNSMTADYKISPETDHY--ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLN 569
+ N++ K+ T+ + + +ID+Y + Q A S+P E++ V S ++
Sbjct: 402 HANAL----KMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLP-EKNTVCWNSLIS 453
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 331 bits (849), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 211/663 (31%), Positives = 325/663 (49%), Gaps = 81/663 (12%)
Query: 20 GLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPER---NVFSWNTIISACIKSHDLKQAR 76
G N L+ +YS+ L E+ +FDE+ +R +V SWN+I+SA +KS + A
Sbjct: 185 GFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTAL 244
Query: 77 SLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCV 136
LF + L + + +E R D ++ + L C
Sbjct: 245 DLFSK--------------------------MTLIVHEKPTNE--RSDIISIVNILPACG 276
Query: 137 KLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKN 196
L V +++H ++ F ++LID Y+KC E A +VF E +++S N
Sbjct: 277 SLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFN-MMEFKDVVSWN 335
Query: 197 AMVAACCREGEMEMALKTFWRQPELN---DAVSWNTLISGYVQNGDAEEGLKLFVRMGEN 253
AMVA + G E A + F + N D V+W +I+GY Q G + E L LF +M +
Sbjct: 336 AMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFS 395
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS--NPF--------VSSGIVDV 303
G N T S LSAC L EIH++ LKN L++ N F V + ++D+
Sbjct: 396 GSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDM 455
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFD--SLTEKNVVVWTA 361
Y KC + A S+ FD L E+NVV WT
Sbjct: 456 YSKCRSFKAARSI-------------------------------FDDIPLEERNVVTWTV 484
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKE-GVVTDALILVILLGACALQAALHPGKEIHAYILR 420
+ G+ + + L E +++ GV +A + +L ACA AA+ GK+IHAY+LR
Sbjct: 485 MIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR 544
Query: 421 MGVQMDKK--LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
+ + L+DMYSKCG++ A +F + ++ + + M+ Y HG +A+
Sbjct: 545 HHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEAL 604
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
+F++M + G PD +TF+ +L A HCG V+ G YF+SM+ADY ++P +HYAC IDL
Sbjct: 605 DIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDL 664
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARY 598
R+ +L+KA +K +P E AV+ + L+ CR++ N ELA A KL+ + N Y
Sbjct: 665 LARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSY 724
Query: 599 VQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
++N+YA G W ++ RIR M+ + GCSWV + F VGD SHP + IY
Sbjct: 725 TLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIY 784
Query: 659 SVL 661
++L
Sbjct: 785 ALL 787
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 124/459 (27%), Positives = 212/459 (46%), Gaps = 56/459 (12%)
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
R D FT+ L C +L + G H + +++ F ++L+ MYS+C EEA
Sbjct: 152 RPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASM 211
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F+ T Q ++D +SWN+++S +V++ +A
Sbjct: 212 IFDEIT------------------------------QRGIDDVISWNSIVSAHVKSSNAW 241
Query: 242 EGLKLFVRMG------ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF 295
L LF +M R + + + L AC L+ V KE+H ++NG + F
Sbjct: 242 TALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVF 301
Query: 296 VSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKN 355
V + ++D Y KC M A + + ++ S ++M+ GYS GN E A F ++ ++N
Sbjct: 302 VGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKEN 361
Query: 356 ----VVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG 411
VV WTA+ +GY + +L + + G + + + ++ +L ACA A G
Sbjct: 362 IPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIF-SGSLPNCVTIISVLSACASLGAFSQG 420
Query: 412 KEIHAYILRM----------GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFI--ERDLV 459
EIHAY L+ G D + + L+DMYSKC + A IF + ER++V
Sbjct: 421 TEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVV 480
Query: 460 LYNVMIACYAHHGHEEKAILLFEEMLEK--GIKPDAVTFVAILSAFRHCGSVEMGEKYFN 517
+ VMI +A +G A+ LF EM+ + G+ P+A T IL A H ++ +G++
Sbjct: 481 TWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHA 540
Query: 518 SMTADYKISPETDHYA-CMIDLYGRANQLEKAIEFMKSI 555
+ ++ A C+ID+Y + ++ A S+
Sbjct: 541 YVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSM 579
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 142/564 (25%), Positives = 239/564 (42%), Gaps = 126/564 (22%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H AI+ G N LI Y+K L+ + K+F+ M ++V SWN +++ +S +
Sbjct: 288 HGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNF 347
Query: 73 KQARSLFDSSPHK----DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
+ A LF + + D+VT+ +++ GY + G +AL LF +M + + T+
Sbjct: 348 EAAFELFKNMRKENIPLDVVTWTAVIAGY-SQRGCSHEALNLFRQMIFSGS--LPNCVTI 404
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKT-----SNDASG-----FAVSSLIDMYSKCRCYEE 178
S L+ C L G ++HA+ +K ND G ++LIDMYSKCR ++
Sbjct: 405 ISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKA 464
Query: 179 ACRVFEGCT-EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQN 237
A +F+ EE N+++ M I G+ Q
Sbjct: 465 ARSIFDDIPLEERNVVTWTVM--------------------------------IGGHAQY 492
Query: 238 GDAEEGLKLFVRMGEN--GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP- 294
GD+ + LKLFV M GV N +T + L AC L ++ K+IH++VL++ +
Sbjct: 493 GDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSA 552
Query: 295 -FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
FV++ ++D+Y KC +++ A + +++ S +SM+ GY + G EA FD +
Sbjct: 553 YFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKM-- 610
Query: 354 KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
K G V D + +++L AC+
Sbjct: 611 ------------------------------RKAGFVPDDITFLVVLYACS---------- 630
Query: 414 IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH 473
H ++ G +S M + G AE Y I A G
Sbjct: 631 -HCGMVDQG-------LSYFDSMSADYGLTPRAE------------HYACAIDLLARSGR 670
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD-HY 532
+KA ++M ++P AV +VA+LSA R +VE+ E N + +++ E D Y
Sbjct: 671 LDKAWRTVKDM---PMEPTAVVWVALLSACRVHSNVELAEHALNKLV---EMNAENDGSY 724
Query: 533 ACMIDLY---GRANQLEKAIEFMK 553
+ ++Y GR + + MK
Sbjct: 725 TLISNIYATAGRWKDVARIRHLMK 748
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 139/306 (45%), Gaps = 39/306 (12%)
Query: 222 NDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEI 281
+ AV WN LI +++ G + + + RM G R + T L AC L + +C
Sbjct: 118 SPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAF 177
Query: 282 HSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNM 341
H + NG SN F+ + +V +Y +C G++
Sbjct: 178 HGLICCNGFESNVFICNALVAMYSRC-------------------------------GSL 206
Query: 342 EEARRHFDSLTEK---NVVVWTALFSGYVKAQNCEALFDLLSE--FVTKEGVV---TDAL 393
EEA FD +T++ +V+ W ++ S +VK+ N DL S+ + E +D +
Sbjct: 207 EEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDII 266
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF 453
+V +L AC A+ KE+H +R G D + + L+D Y+KCG M A +F
Sbjct: 267 SIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMM 326
Query: 454 IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
+D+V +N M+A Y+ G+ E A LF+ M ++ I D VT+ A+++ + G
Sbjct: 327 EFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEAL 386
Query: 514 KYFNSM 519
F M
Sbjct: 387 NLFRQM 392
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 209/661 (31%), Positives = 319/661 (48%), Gaps = 100/661 (15%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
++ L+ H I AG T T TN L+++YSK L + KLFD MP+RN+ SW
Sbjct: 17 KTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTA 76
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSM-LCGYINAEGYEADALKLFIEMQSADEH 120
+IS ++ +A + T+ M +CG +
Sbjct: 77 MISGLSQNSKFSEA-----------IRTFCGMRICGEVPT-------------------- 105
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
+F +S + C L ++ G+Q+H +K + F S+L DMYSKC +AC
Sbjct: 106 ----QFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDAC 161
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+VFE EM K D VSW +I GY + G+
Sbjct: 162 KVFE------------------------EMPCK---------DEVSWTAMIDGYSKIGEF 188
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
EE L F +M + V ++H S L AC L+ K + +HS V+K G S+ FV + +
Sbjct: 189 EEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNAL 248
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
D+Y K +M A N F I S E R NVV +T
Sbjct: 249 TDMYSKAGDMESAS---------NVFGIDS------------ECR---------NVVSYT 278
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
L GYV+ + E + E + ++G+ + L+ ACA QAAL G ++HA +++
Sbjct: 279 CLIDGYVETEQIEKGLSVFVE-LRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMK 337
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
+ D + S LVDMY KCG + +A F + + +N +++ + HG + AI
Sbjct: 338 INFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKF 397
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
FE M+++G+KP+A+TF+++L+ H G VE G YF SM Y + P +HY+C+IDL G
Sbjct: 398 FERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLG 457
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQ 600
RA +L++A EF+ +P E +A SFL CR++ + E+ A EKL++LE N V
Sbjct: 458 RAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVL 517
Query: 601 LANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSV 660
L+N+YA E W ++ +R +MR + G SWV V ++ H+F D SH + +AIY
Sbjct: 518 LSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHXRKSAIYEK 577
Query: 661 L 661
L
Sbjct: 578 L 578
>gi|90657601|gb|ABD96900.1| hypothetical protein [Cleome spinosa]
Length = 924
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 225/739 (30%), Positives = 359/739 (48%), Gaps = 121/739 (16%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
N K H A++ G ++ + L+ +Y+K L ES +F MP++N SW+ II+
Sbjct: 196 NYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKRLDESFTVFYAMPQKNWISWSAIIA 255
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
C++ N+ L G LK+F EMQ + +
Sbjct: 256 GCVQ----------------------NNFLDG----------GLKMFKEMQKVG--VGVS 281
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
+ S L C L ++ G QLHA +K+ G ++ +DMY+KC ++A R+F+
Sbjct: 282 QSIYASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFD 341
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN---DAVSW-------------- 227
+E +NL S NAM+ ++ AL F + + + D +S
Sbjct: 342 -MSENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLS 400
Query: 228 ---------------------NTLISGYVQNGDAEEGLKLFVRMG-ENGVRWN------- 258
N I Y + +E ++F MG ++ V WN
Sbjct: 401 EGLQLHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHE 460
Query: 259 -----------------------EHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF 295
E+TF S L AC G ++ EIH+ ++K G+ SNP+
Sbjct: 461 QNEERSKTLNILVSMLRSGMEPDEYTFGSVLKACAG-DSLNHGMEIHTTIVKLGMASNPY 519
Query: 296 VSSGIVDVYCKCENMNYAESM--LLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
+ S +VD+Y KC ++ AE + + G+ +S + S +EE + D +
Sbjct: 520 IGSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEH------PETIEEPKGIQDRRVQ 573
Query: 354 KNVVVWTALFSGYV---KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHP 410
+ +V W A+ SGYV ++++ + F+ + E G+ D +L CA A++
Sbjct: 574 EMIVSWNAIISGYVMRKQSEDAQRFFNRMMEM----GITPDKFTYSTVLDTCANLASIGL 629
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
GK+IHA++++ +Q D + STLVDMYSKCGN+ + ++F+ RD V +N MI YAH
Sbjct: 630 GKQIHAHVIKKELQYDVYICSTLVDMYSKCGNLHDSRLMFEKAPIRDFVTWNAMICGYAH 689
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD 530
HG E+AI LFE M+ I P+ TFV++L A H G VE G YF+ M +Y + P +
Sbjct: 690 HGMGEEAIKLFESMVLMNIMPNHATFVSLLRACAHMGLVERGLDYFHMMKKEYGLDPRLE 749
Query: 531 HYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNR-NAELAGEAEEKLLR 589
HY+ M+D+ G++ ++EKA+E ++ +P E D VI + L+ C++NR N E A A LLR
Sbjct: 750 HYSNMVDILGKSGEVEKALELIQEMPFEADDVIWRTLLSACKINRNNVEAAEVAANALLR 809
Query: 590 LEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDV 649
L+ + + Y+ L+N+YA G W + +R MR K + GCSWV + E H F VGD
Sbjct: 810 LDPQDSSTYILLSNIYADAGMWDKASELRTAMRSDKLKKEPGCSWVEIRDEFHTFLVGDK 869
Query: 650 SHPKTNAIYSVLAIFTGEL 668
+HP+ IY+ LA+ E+
Sbjct: 870 AHPRWKEIYNGLALIYNEM 888
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 165/648 (25%), Positives = 276/648 (42%), Gaps = 144/648 (22%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H I +G T +N L+ +Y L + KLFD MP R+V SWN +I S+D+
Sbjct: 72 HAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGMPLRDVVSWNAMIFGYAASNDM 131
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+A F+ P +D+V++NSML G++ G +++K+FIEM + + D + + L
Sbjct: 132 VRASLCFEMMPTRDVVSWNSMLSGFLQT-GENLESVKVFIEMGRSG--VEFDNKSFSVIL 188
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+C L N G Q+H ++ D + S+L+DMY+KC+ +E+ VF ++ N
Sbjct: 189 KVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKRLDESFTVFYAMPQK-NW 247
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
IS +A++A C VQN + GLK+F M +
Sbjct: 248 ISWSAIIAGC--------------------------------VQNNFLDGGLKMFKEMQK 275
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
GV ++ +AS L +C L +++ ++H+ LK+ + + V + +D+Y KC NM
Sbjct: 276 VGVGVSQSIYASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQD 335
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGN----------MEEARRHFDSLT---------- 352
A+ + + N S ++MI GYS + N + ++ FD ++
Sbjct: 336 AQRLFDMSENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACAT 395
Query: 353 -------------------EKNVVVWTALFSGYVKAQNCEALFD---LLSEFVTKEGVVT 390
+N+ V A Y K CEAL + + E K+ V
Sbjct: 396 VKGLSEGLQLHGLATKSNFSRNICVANAFIDMYGK---CEALDEACRVFDEMGRKDAVSW 452
Query: 391 DALI------------LVIL------------------LGACALQAALHPGKEIHAYILR 420
+A+I L IL L ACA +L+ G EIH I++
Sbjct: 453 NAIIAAHEQNEERSKTLNILVSMLRSGMEPDEYTFGSVLKACA-GDSLNHGMEIHTTIVK 511
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF--------------------------- 453
+G+ + + S+LVDMYSKCG + AE I
Sbjct: 512 LGMASNPYIGSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRR 571
Query: 454 IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
++ +V +N +I+ Y E A F M+E GI PD T+ +L + S+ +G+
Sbjct: 572 VQEMIVSWNAIISGYVMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGK 631
Query: 514 KYFNSMTADYKISPETDHYAC--MIDLYGRANQLEKAIEFMKSIPTEE 559
+ + K + D Y C ++D+Y + L + + P +
Sbjct: 632 QIHAHVI---KKELQYDVYICSTLVDMYSKCGNLHDSRLMFEKAPIRD 676
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 192/416 (46%), Gaps = 39/416 (9%)
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
C K G+Q HA M+ + + F + L+ +Y C A ++F+G +++S
Sbjct: 59 CAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGMPLR-DVVS 117
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
NAM+ +M A F P D VSWN+++SG++Q G+ E +K+F+ MG +G
Sbjct: 118 WNAMIFGYAASNDMVRASLCFEMMPT-RDVVSWNSMLSGFLQTGENLESVKVFIEMGRSG 176
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
V ++ +F+ L C L N K +IH L+ G ++ S ++D+Y KC+ ++
Sbjct: 177 VEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKRLD--- 233
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEA 374
SF++ F ++ +KN + W+A+ +G V+ +
Sbjct: 234 ---------ESFTV-------------------FYAMPQKNWISWSAIIAGCVQNNFLDG 265
Query: 375 LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLV 434
+ E + K GV I +L +CA L G ++HA+ L+ D + + +
Sbjct: 266 GLKMFKE-MQKVGVGVSQSIYASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATL 324
Query: 435 DMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAV 494
DMY+KC NM A+ +F +L YN MI Y+ + +A+LLF ++ + + D +
Sbjct: 325 DMYAKCNNMQDAQRLFDMSENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEI 384
Query: 495 TFVAILSAFRHCGSVE-MGEKY-FNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
+ A R C +V+ + E + + S ID+YG+ L++A
Sbjct: 385 SLSG---ALRACATVKGLSEGLQLHGLATKSNFSRNICVANAFIDMYGKCEALDEA 437
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 141/289 (48%), Gaps = 6/289 (2%)
Query: 262 FASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKG 321
F+ C R + K+ H+ ++ +G FVS+ ++ +Y C N+ YA +
Sbjct: 52 FSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGMP 111
Query: 322 VRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK-AQNCEALFDLLS 380
+R+ S ++MI GY+ +M A F+ + ++VV W ++ SG+++ +N E++ +
Sbjct: 112 LRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFIE 171
Query: 381 EFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC 440
+ + GV D ++L C++ G +IH LRMG D S L+DMY+KC
Sbjct: 172 --MGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKC 229
Query: 441 GNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAIL 500
+ + +F +++ + ++ +IA + + + +F+EM + G+ + ++L
Sbjct: 230 KRLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVL 289
Query: 501 SAFRHCGSVEMGEK-YFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
+ + +G + + +++ +D+ + +D+Y + N ++ A
Sbjct: 290 KSCATLPDLRLGTQLHAHALKSDF--VKDGIVRTATLDMYAKCNNMQDA 336
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 98/233 (42%), Gaps = 42/233 (18%)
Query: 375 LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLV 434
+F + + V E T + CA Q A GK+ HA+++ G + + + L+
Sbjct: 32 IFSISTASVNHEKPATSVANFSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLL 91
Query: 435 DMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAV 494
+Y CGN+ YA +F RD+V +N MI YA +A L FE M + D V
Sbjct: 92 QLYINCGNLGYATKLFDGMPLRDVVSWNAMIFGYAASNDMVRASLCFEMMPTR----DVV 147
Query: 495 TFVAILSAFRHCGS--------VEMGE-------KYFN------SMTADYKISPETDHYA 533
++ ++LS F G +EMG K F+ S+ +YK+ + A
Sbjct: 148 SWNSMLSGFLQTGENLESVKVFIEMGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIA 207
Query: 534 -------------CMIDLYGRANQLEKAIEFMKSIPTEE----DAVILGSFLN 569
++D+Y + +L+++ ++P + A+I G N
Sbjct: 208 LRMGYDTDVVSGSALLDMYAKCKRLDESFTVFYAMPQKNWISWSAIIAGCVQN 260
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 208/731 (28%), Positives = 343/731 (46%), Gaps = 111/731 (15%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT--- 61
+LK H ++ G+ ++ ++ Y+K +RE++ +FD MP R+V +WN+
Sbjct: 156 DLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSS 215
Query: 62 --------------------------------IISACIKSHDLK---------------- 73
I+SAC DLK
Sbjct: 216 CYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVE 275
Query: 74 -------------------QARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
+A+++FD PH++++T+NS+ Y+N G+ L +F EM
Sbjct: 276 NVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNC-GFPQKGLNVFREM 334
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
++ D ++S L C +L ++ G+ +H F VK F ++L+++Y+ C
Sbjct: 335 --GLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCL 392
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
C EA VF+ P N V+WN+L S Y
Sbjct: 393 CVREAQTVFD--------------------------------LMPHRN-VVTWNSLSSCY 419
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
V G ++GL +F M NGV+ + T S L AC L+++K K IH + +++G++ +
Sbjct: 420 VNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDV 479
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
FV + ++ +Y KC + A+ + L R S + ++ Y E+ F +
Sbjct: 480 FVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRD 539
Query: 355 NV----VVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHP 410
V + W+ + G VK E ++ + T G D + +L AC+L L
Sbjct: 540 EVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTM-GFKPDETTIYSILRACSLSECLRM 598
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
GKEIH Y+ R D + LVDMY+KCG ++ + +F +D+ +N MI
Sbjct: 599 GKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGM 658
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD 530
HG+ ++A+ LFE+ML +KPD+ TF +LSA H VE G + FNSM+ D+ + PE +
Sbjct: 659 HGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAE 718
Query: 531 HYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRL 590
HY C++D+Y RA LE+A F++ +P E A+ +FL CR+ +N ELA + +KL +
Sbjct: 719 HYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEI 778
Query: 591 EGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVS 650
+ N A YV L N+ W+E +IRK M+ + GCSW +V + +H F GD S
Sbjct: 779 DPNGSANYVTLFNILVTAKLWSEASKIRKLMKERGITKTPGCSWFHVGNRVHTFVAGDKS 838
Query: 651 HPKTNAIYSVL 661
+ +++ IY+ L
Sbjct: 839 NMESDKIYNFL 849
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 214/443 (48%), Gaps = 68/443 (15%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N I A K ++ AR +FD +D+VT+NS+ Y+N G+ L +F +M
Sbjct: 79 NAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNC-GFPQQGLNVFRKM--GLN 135
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
++ + TV+S L C L ++ G+++H F+V+ F S+ ++ Y+KC C EA
Sbjct: 136 KVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREA 195
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
VF+ P D V+WN+L S YV G
Sbjct: 196 QTVFD--------------------------------LMPH-RDVVTWNSLSSCYVNCGF 222
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
++GL +F M +GV+ + T + LSAC L+++K K IH + LK+G++ N FVS+
Sbjct: 223 PQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNA 282
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
+V++Y ES L ++ EA+ FD + +NV+ W
Sbjct: 283 LVNLY---------ESCLCVR----------------------EAQAVFDLMPHRNVITW 311
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
+L S YV + ++ E + GV D + + +L AC+ L GK IH + +
Sbjct: 312 NSLASCYVNCGFPQKGLNVFRE-MGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAV 370
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
+ G+ D + + LV++Y+ C + A+ +F R++V +N + +CY + G +K +
Sbjct: 371 KHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLN 430
Query: 480 LFEEMLEKGIKPDAVTFVAILSA 502
+F EM+ G+KPD VT ++IL A
Sbjct: 431 VFREMVLNGVKPDLVTMLSILHA 453
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 125/271 (46%), Gaps = 38/271 (14%)
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
+ +G E +K++ G++ ++ F + AC R+ K+ H + G++S+
Sbjct: 16 IPHGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDV 75
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
+ + + Y KC+ + E ARR FD L +
Sbjct: 76 SIGNAFIHAYGKCKCV-------------------------------EGARRVFDDLVAR 104
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEG---VVTDALILVILLGACALQAALHPG 411
+VV W +L + YV NC L+ F K G V + L + +L C+ L G
Sbjct: 105 DVVTWNSLSACYV---NCGFPQQGLNVF-RKMGLNKVKANPLTVSSILPGCSDLQDLKSG 160
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
KEIH +++R G+ D + S V+ Y+KC + A+ +F RD+V +N + +CY +
Sbjct: 161 KEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNC 220
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
G +K + +F EM+ G+KPD VT ILSA
Sbjct: 221 GFPQKGLNVFREMVLDGVKPDPVTVSCILSA 251
>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 197/620 (31%), Positives = 315/620 (50%), Gaps = 73/620 (11%)
Query: 54 RNVFSWNTIISACI-----KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADAL 108
++ F++++II K + A +F++ P+ +YN+++ GY + AL
Sbjct: 267 KSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQD-QGLKAL 325
Query: 109 KLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLID 168
+F +Q ++ DE +++ L C + G QLH VK + ++++D
Sbjct: 326 DIFQSLQR--NNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANTILD 383
Query: 169 MYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWN 228
MY KC EAC +FE EME DAVSWN
Sbjct: 384 MYGKCGALMEACLIFE----------------------EMER-----------RDAVSWN 410
Query: 229 TLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKN 288
+I+ + QN + + L LFV M + + ++ T+ S + AC G + + EIH ++K+
Sbjct: 411 AIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKS 470
Query: 289 GLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHF 348
G+ + FV S +VD+Y KC G + EA +
Sbjct: 471 GMGLDWFVGSALVDMYGKC-------------------------------GMLMEAEKIH 499
Query: 349 DSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAAL 408
L EK V W ++ SG+ + E S+ + + G++ D +L CA A +
Sbjct: 500 ARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQML-EMGIIPDNYTYATVLDVCANMATI 558
Query: 409 HPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACY 468
GK+IHA IL++ + D + STLVDMYSKCGNM + ++F+ +RD V ++ MI Y
Sbjct: 559 ELGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMICAY 618
Query: 469 AHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE 528
A+HG EKAI LFEEM +KP+ F+++L A H G V+ G YF M + Y + P+
Sbjct: 619 AYHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQKMLSHYGLDPQ 678
Query: 529 TDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLL 588
+HY+CM+DL GR+ Q+ +A++ ++S+P E D VI + L+ C++ N E+A +A LL
Sbjct: 679 MEHYSCMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLL 738
Query: 589 RLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGD 648
+L+ + + YV LANVYA G W E+ ++R M+ K + GCSW+ V E+H F VGD
Sbjct: 739 QLDPQDSSAYVLLANVYAIVGMWGEVAKMRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGD 798
Query: 649 VSHPKTNAIYSVLAIFTGEL 668
+HP++ IY + E+
Sbjct: 799 KAHPRSEEIYEQTHLLVDEM 818
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 156/545 (28%), Positives = 255/545 (46%), Gaps = 87/545 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H Q I G T N L+ Y K + + + K+FD MP+R+V SWNT+I ++
Sbjct: 29 HTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRMPQRDVISWNTLIFGYAGIGNM 88
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
A+SLFDS P +D+V++NS+L Y++ G ++++F+ M+S I D T L
Sbjct: 89 GFAQSLFDSMPERDVVSWNSLLSCYLH-NGVNRKSIEIFVRMRSL--KIPHDYATFAVIL 145
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C + + G G Q+H ++ + S+L+DMYSKC+ ++A RVF
Sbjct: 146 KACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDDAFRVF--------- 196
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
RE PE N V W+ +I+GYVQN EGLKLF M +
Sbjct: 197 -----------RE------------MPERN-LVCWSAVIAGYVQNDRFIEGLKLFKDMLK 232
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G+ ++ T+AS +C GL K ++H LK+ + + + +D+Y KCE M
Sbjct: 233 VGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFD 292
Query: 313 AESML--LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
A + L R S+ +++IVGY+ Q +A F SL N+ G+
Sbjct: 293 AWKVFNTLPNPPRQSY--NAIIVGYARQDQGLKALDIFQSLQRNNL--------GF---- 338
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
D + L L AC++ G ++H ++ G+ + +
Sbjct: 339 --------------------DEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVA 378
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEE--KAILLFEEMLEKG 488
+T++DMY KCG + A +IF+ RD V +N +IA AH +EE K + LF ML
Sbjct: 379 NTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIA--AHEQNEEIVKTLSLFVSMLRST 436
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYF-----NSMTADYKISPETDHYACMIDLYGRAN 543
++PD T+ +++ A ++ G + + M D+ + + ++D+YG+
Sbjct: 437 MEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVG------SALVDMYGKCG 490
Query: 544 QLEKA 548
L +A
Sbjct: 491 MLMEA 495
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 164/378 (43%), Gaps = 34/378 (8%)
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
+ T + L C L + G+Q+H M+ T + + + L+ Y K A +VF+
Sbjct: 6 KLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFD 65
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
+ ++IS N ++ G M A F PE D VSWN+L+S Y+ NG + +
Sbjct: 66 RMPQR-DVISWNTLIFGYAGIGNMGFAQSLFDSMPE-RDVVSWNSLLSCYLHNGVNRKSI 123
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
++FVRM + + TFA L AC G+ + ++H ++ G ++ S +VD+Y
Sbjct: 124 EIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMY 183
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
KC+ +++A R F + E+N+V W+A+ +
Sbjct: 184 SKCK-------------------------------KLDDAFRVFREMPERNLVCWSAVIA 212
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
GYV+ L + + K G+ + +CA +A G ++H + L+
Sbjct: 213 GYVQNDRFIEGLKLFKDML-KVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFA 271
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
D + + +DMY+KC M A +F YN +I YA KA+ +F+ +
Sbjct: 272 YDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSL 331
Query: 485 LEKGIKPDAVTFVAILSA 502
+ D ++ L+A
Sbjct: 332 QRNNLGFDEISLSGALTA 349
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 154/315 (48%), Gaps = 18/315 (5%)
Query: 261 TFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLK 320
TF+ L C L+ + K++H+ ++ G + +V++ ++ YCK MNYA +
Sbjct: 8 TFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRM 67
Query: 321 GVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLS 380
R+ S +++I GY+ GNM A+ FDS+ E++VV W +L S Y+ ++
Sbjct: 68 PQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFV 127
Query: 381 EFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC 440
+ + + D ++L AC+ G ++H ++MG + D S LVDMYSKC
Sbjct: 128 RMRSLK-IPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKC 186
Query: 441 GNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI- 499
+ A +F+ ER+LV ++ +IA Y + + + LF++ML+ G+ T+ ++
Sbjct: 187 KKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVF 246
Query: 500 -----LSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKS 554
LSAF+ G+ G + D I T +D+Y + ++ A + +
Sbjct: 247 RSCAGLSAFK-LGTQLHGHALKSDFAYDSIIGTAT------LDMYAKCERMFDAWKVFNT 299
Query: 555 IPTEE----DAVILG 565
+P +A+I+G
Sbjct: 300 LPNPPRQSYNAIIVG 314
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 156/362 (43%), Gaps = 67/362 (18%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACI 67
E + H A+K GL N ++ +Y K L E+ +F+EM R+ SWN II+A
Sbjct: 358 EGIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHE 417
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFT 127
++ ++ + SLF S ++S E D+FT
Sbjct: 418 QNEEIVKTLSLFVSM-------------------------------LRSTMEP---DDFT 443
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
S + C + +G ++H ++K+ F S+L+DMY KC EA ++
Sbjct: 444 YGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHARLE 503
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
E+ VSWN++ISG+ +E + F
Sbjct: 504 EKTT---------------------------------VSWNSIISGFSSQKQSENAQRYF 530
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
+M E G+ + +T+A+ L C + ++ K+IH+ +LK L S+ +++S +VD+Y KC
Sbjct: 531 SQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHAQILKLQLHSDVYIASTLVDMYSKC 590
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
NM + M R+ + S+MI Y+ G E+A F+ + NV +F +
Sbjct: 591 GNMQDSRLMFEKAPKRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHTIFISVL 650
Query: 368 KA 369
+A
Sbjct: 651 RA 652
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 92/226 (40%), Gaps = 58/226 (25%)
Query: 390 TDALILVILLGACALQAALHPGKEIHAYILRMGV-------------------------- 423
T L +L C+ AL+PGK++H ++ G
Sbjct: 4 TKKLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKV 63
Query: 424 -----QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
Q D +TL+ Y+ GNM +A+ +F + ERD+V +N +++CY H+G K+I
Sbjct: 64 FDRMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSI 123
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFR-----------HCGSVEMGEKYFNSMTADYKISP 527
+F M I D TF IL A HC +++MG + N +
Sbjct: 124 EIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMG--FENDVVTG----- 176
Query: 528 ETDHYACMIDLYGRANQLEKAIEFMKSIPTEE----DAVILGSFLN 569
+ ++D+Y + +L+ A + +P AVI G N
Sbjct: 177 -----SALVDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQN 217
>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 868
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 194/605 (32%), Positives = 313/605 (51%), Gaps = 76/605 (12%)
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGYI-NAEGYEADALKLFIEMQSADEHIRMDEF 126
K ++ A LF P +L +YN+M+ GY N +G++A KLF+++Q DE
Sbjct: 305 KCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQA--FKLFLQLQK--NSFSFDEV 360
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
+++ L+ + G QLH +K++ ++ ++++DMY KC EA +F+
Sbjct: 361 SLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFD-- 418
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
EM E+ D VSWN +I+ QN + L
Sbjct: 419 ----------------------EM---------EIRDPVSWNAIITACEQNESEGKTLSH 447
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
F M + + +E T+ S L AC G R E+H ++K+G+ FV S +VD+Y K
Sbjct: 448 FGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSK 507
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
C G MEEA + L E+ +V W A+ SG+
Sbjct: 508 C-------------------------------GMMEEAEKIHYRLEEQTMVSWNAIISGF 536
Query: 367 V---KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
K+++ + F + E GV D +L CA A + GK+IHA ++++ +
Sbjct: 537 SLQKKSEDSQRFFSHMLEM----GVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLEL 592
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
D + STLVDMYSKCGNM + ++F+ +RD V +N MI +A+HG E+A+ LFE
Sbjct: 593 LSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEH 652
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRAN 543
ML + IKP+ TFV++L A H G+ + G YF M + Y + P+ +HY+CM+D+ GR+
Sbjct: 653 MLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSG 712
Query: 544 QLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLAN 603
Q+E+A+ ++ +P E DA+I + L++C++ N E+A +A LL+L+ + + Y L+N
Sbjct: 713 QVEEALRLIQDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSN 772
Query: 604 VYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAI 663
+YA G W ++ +IR+ MR + GCSW+ V+ E+H F V D +HPK IYS+L +
Sbjct: 773 IYADAGMWQQVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDL 832
Query: 664 FTGEL 668
++
Sbjct: 833 LICDM 837
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 170/629 (27%), Positives = 278/629 (44%), Gaps = 117/629 (18%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
LK H I +G T T TN LI +Y K L + K+F+EMP+R++ SWNT++
Sbjct: 40 LKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEMPQRDIVSWNTMVFG 99
Query: 66 CIKSHDLKQARSLFDSSPHK-DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
C + ++ A+++F+S PH D+V++NS++ GY+ G ++ +F++M+ D + D
Sbjct: 100 CAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQ-NGDIQKSIAVFLKMR--DLGVMFD 156
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
T+ +L +C L + G Q+H V+ D S+L+DMY+KC E++ VF
Sbjct: 157 HTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNSLEDSLDVFS 216
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
L KN W +SW+ I+G VQN GL
Sbjct: 217 ------ELPDKN-------------------W--------ISWSAAIAGCVQNDQLLRGL 243
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
KLF M G+ ++ T+AS +C GL + ++H LK S+ V + +D+Y
Sbjct: 244 KLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMY 303
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGY--------------------------SLQ 338
KC+NM+ A + L N S ++MI+GY SL
Sbjct: 304 AKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLS 363
Query: 339 GNMEEA---RRHFDSLT----------EKNVVVWTALFSGYVKAQNCEALFD---LLSEF 382
G + A + H + L N+ V A+ Y K C AL + L E
Sbjct: 364 GALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGK---CGALVEASGLFDEM 420
Query: 383 VTKEGVVTDALILVI------------------------------LLGACALQAALHPGK 412
++ V +A+I +L ACA Q A G
Sbjct: 421 EIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGM 480
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
E+H I++ G+ + + S LVDMYSKCG M AE I E+ +V +N +I+ ++
Sbjct: 481 EVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQK 540
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
E + F MLE G++PD T+ +L + +V +G++ M K+ +D Y
Sbjct: 541 KSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMI---KLELLSDVY 597
Query: 533 --ACMIDLYGRANQLEKAIEFMKSIPTEE 559
+ ++D+Y + + ++ + P +
Sbjct: 598 ITSTLVDMYSKCGNMHDSLLMFRKAPKRD 626
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 158/362 (43%), Gaps = 67/362 (18%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACI 67
E L H AIK+ L+ N ++ +Y K L E+ LFDEM R+ SWN II+AC
Sbjct: 377 EGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACE 436
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFT 127
+ + S K L + +ML + DEFT
Sbjct: 437 Q-----------NESEGKTLSHFGAML-----------------------RSKMEPDEFT 462
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
S L C G ++H ++K+ F S+L+DMYSKC
Sbjct: 463 YGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKC-------------- 508
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
G ME A K +R E VSWN +ISG+ +E+ + F
Sbjct: 509 ------------------GMMEEAEKIHYRLEE-QTMVSWNAIISGFSLQKKSEDSQRFF 549
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
M E GV + T+A+ L C L V K+IH+ ++K L+S+ +++S +VD+Y KC
Sbjct: 550 SHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKC 609
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
NM+ + M R+S + ++MI G++ G EEA F+ + +N+ A F +
Sbjct: 610 GNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSVL 669
Query: 368 KA 369
+A
Sbjct: 670 RA 671
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 151/317 (47%), Gaps = 21/317 (6%)
Query: 261 TFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLK 320
TF+ C R +K KE H+ ++ +G FV++ ++ +Y KC + YA +
Sbjct: 26 TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85
Query: 321 GVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK-NVVVWTALFSGYVK---AQNCEALF 376
R+ S ++M+ G + G ME A+ F+S+ +VV W +L SGY++ Q A+F
Sbjct: 86 PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVF 145
Query: 377 DLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDM 436
+ + GV+ D L + L C+L G +IH ++MG D S LVDM
Sbjct: 146 LKMRDL----GVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDM 201
Query: 437 YSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTF 496
Y+KC ++ + +F +++ + ++ IA + + + LF+EM KGI T+
Sbjct: 202 YAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTY 261
Query: 497 VAILSAFRHCGSV---EMGEK-YFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
++ FR C + +G + + +++ D+ + +D+Y + + + A +
Sbjct: 262 ASV---FRSCAGLSASRLGTQLHCHALKTDF--GSDVIVGTATLDMYAKCDNMSDAYKLF 316
Query: 553 KSIPTEE----DAVILG 565
+P +A+I+G
Sbjct: 317 SLLPDHNLQSYNAMIIG 333
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 110/264 (41%), Gaps = 67/264 (25%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + IK+G+ L + L+ +YSK ++ E+ K+ + E+ + SWN IIS
Sbjct: 483 HGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISG------- 535
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+ + D+ + F M + + D FT + L
Sbjct: 536 -------------------------FSLQKKSEDSQRFFSHM--LEMGVEPDNFTYATVL 568
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C L VG G+Q+HA M+K + + S+L+DMYSKC
Sbjct: 569 DTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKC------------------- 609
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
G M +L F + P+ D+V+WN +I G+ +G EE L+LF M
Sbjct: 610 -------------GNMHDSLLMFRKAPK-RDSVTWNAMICGFAYHGLGEEALELFEHMLH 655
Query: 253 NGVRWNEHTFASALSACCGLRNVK 276
++ N TF S L AC + N K
Sbjct: 656 ENIKPNHATFVSVLRACSHVGNAK 679
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 199/647 (30%), Positives = 338/647 (52%), Gaps = 56/647 (8%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
I+ N LI YS+ + ++R +FDEM ++N+ SWN+I++ ++ ++A+++FD +
Sbjct: 99 ISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSER 158
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR 145
+ +++N ++ GYIN G +A ++F RM E V S + + G
Sbjct: 159 NTISWNGLVSGYIN-NGMINEAREVFD---------RMPERNVVSWTAMVRGYVKEGMIS 208
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
+ + L + + R +EACR+F+ E+ +++++ M+ C+
Sbjct: 209 EAETLFWQMPEKNVVSWTVMLGGLLQEGRI-DEACRLFDMMPEK-DVVTRTNMIGGYCQV 266
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASA 265
G + A F P N VSW T+I+GYVQN + KLF M E NE ++ +
Sbjct: 267 GRLVEARMLFDEMPRRN-VVSWTTMITGYVQNQQVDIARKLFEVMPEK----NEVSWTAM 321
Query: 266 LSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNS 325
L Y C ++ A + +++
Sbjct: 322 LKG-----------------------------------YTNCGRLDEASELFNAMPIKSV 346
Query: 326 FSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY-VKAQNCEALFDLLSEFVT 384
+ ++MI+ + G + +AR+ FD + EK+ W+A+ Y K +AL L +
Sbjct: 347 VACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDAL--ELFRMMQ 404
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
+EG+ + L+ +L CA A L G+EIHA ++R +D + S L+ MY KCGN+
Sbjct: 405 REGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLA 464
Query: 445 YAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR 504
A+ +F F +D+V++N +I YA HG +A+ +F +M GI PD VTFV +LSA
Sbjct: 465 KAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACS 524
Query: 505 HCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVIL 564
+ G+V+ G + FNSM Y++ + +HYACM+DL GRA +L +A++ ++ +P E DA+I
Sbjct: 525 YTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIW 584
Query: 565 GSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGM 624
G+ L CR + +LA A +KLL LE N ++ L+N+YA++G W ++ +R+ MR
Sbjct: 585 GALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDR 644
Query: 625 KGNRFAGCSWVYVEHEIHIFTVGDVS-HPKTNAIYSVLAIFTGELYE 670
+ +++ GCSW+ VE ++H FT GD S HP+ + I +L +G L E
Sbjct: 645 RVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLRE 691
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 119/476 (25%), Positives = 220/476 (46%), Gaps = 69/476 (14%)
Query: 24 TTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP 83
TI+ N L+ Y + ++ E+R++FD MPERNV SW ++ +K + +A +LF P
Sbjct: 159 NTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMP 218
Query: 84 HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSA-------------------------D 118
K++V++ ML G + EG +A +LF M D
Sbjct: 219 EKNVVSWTVMLGGLLQ-EGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFD 277
Query: 119 EHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEE 178
E R + + T+ + V+ V R+L M + N+ S ++++ Y+ C +E
Sbjct: 278 EMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPE-KNEVSW---TAMLKGYTNCGRLDE 333
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
A +F + ++++ NAM+ + GE+ A + F + E D +W+ +I Y + G
Sbjct: 334 ASELFNAMPIK-SVVACNAMILCFGQNGEVPKARQVFDQMRE-KDEGTWSAMIKVYERKG 391
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
+ L+LF M G+R N + S LS C GL N+ +EIH+ ++++ + +V+S
Sbjct: 392 LELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVAS 451
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
++ +Y KC N+ A+ + V++ +S+I GY+ G EA R F +
Sbjct: 452 VLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMH------ 505
Query: 359 WTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
FS G++ D + V +L AC+ + G EI
Sbjct: 506 ----FS----------------------GIMPDDVTFVGVLSACSYTGNVKKGLEIFNS- 538
Query: 419 LRMGVQMDKKL--ISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMI-ACYAH 470
+ Q+++K+ + +VD+ + G + A ++I + +E D +++ ++ AC H
Sbjct: 539 METKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTH 594
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 199/647 (30%), Positives = 338/647 (52%), Gaps = 56/647 (8%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
I+ N LI YS+ + ++R +FDEM ++N+ SWN+I++ ++ ++A+++FD +
Sbjct: 99 ISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSER 158
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR 145
+ +++N ++ GYIN G +A ++F RM E V S + + G
Sbjct: 159 NTISWNGLVSGYIN-NGMINEAREVFD---------RMPERNVVSWTAMVRGYVKEGMIS 208
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
+ + L + + R +EACR+F+ E+ +++++ M+ C+
Sbjct: 209 EAETLFWQMPEKNVVSWTVMLGGLLQEGRI-DEACRLFDMMPEK-DVVTRTNMIGGYCQV 266
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASA 265
G + A F P N VSW T+I+GYVQN + KLF M E NE ++ +
Sbjct: 267 GRLVEARMLFDEMPRRN-VVSWTTMITGYVQNQQVDIARKLFEVMPEK----NEVSWTAM 321
Query: 266 LSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNS 325
L Y C ++ A + +++
Sbjct: 322 LKG-----------------------------------YTNCGRLDEASELFNAMPIKSV 346
Query: 326 FSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY-VKAQNCEALFDLLSEFVT 384
+ ++MI+ + G + +AR+ FD + EK+ W+A+ Y K +AL L +
Sbjct: 347 VACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDAL--ELFRMMQ 404
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
+EG+ + L+ +L CA A L G+EIHA ++R +D + S L+ MY KCGN+
Sbjct: 405 REGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLA 464
Query: 445 YAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR 504
A+ +F F +D+V++N +I YA HG +A+ +F +M GI PD VTFV +LSA
Sbjct: 465 KAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACS 524
Query: 505 HCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVIL 564
+ G+V+ G + FNSM Y++ + +HYACM+DL GRA +L +A++ ++ +P E DA+I
Sbjct: 525 YTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIW 584
Query: 565 GSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGM 624
G+ L CR + +LA A +KLL LE N ++ L+N+YA++G W ++ +R+ MR
Sbjct: 585 GALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDR 644
Query: 625 KGNRFAGCSWVYVEHEIHIFTVGDVS-HPKTNAIYSVLAIFTGELYE 670
+ +++ GCSW+ VE ++H FT GD S HP+ + I +L +G L E
Sbjct: 645 RVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLRE 691
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 119/476 (25%), Positives = 220/476 (46%), Gaps = 69/476 (14%)
Query: 24 TTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP 83
TI+ N L+ Y + ++ E+R++FD MPERNV SW ++ +K + +A +LF P
Sbjct: 159 NTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMP 218
Query: 84 HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSA-------------------------D 118
K++V++ ML G + EG +A +LF M D
Sbjct: 219 EKNVVSWTVMLGGLLQ-EGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFD 277
Query: 119 EHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEE 178
E R + + T+ + V+ V R+L M + N+ S ++++ Y+ C +E
Sbjct: 278 EMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPE-KNEVSW---TAMLKGYTNCGRLDE 333
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
A +F + ++++ NAM+ + GE+ A + F + E D +W+ +I Y + G
Sbjct: 334 ASELFNAMPIK-SVVACNAMILCFGQNGEVPKARQVFDQMRE-KDEGTWSAMIKVYERKG 391
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
+ L+LF M G+R N + S LS C GL N+ +EIH+ ++++ + +V+S
Sbjct: 392 LELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVAS 451
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
++ +Y KC N+ A+ + V++ +S+I GY+ G EA R F +
Sbjct: 452 VLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMH------ 505
Query: 359 WTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
FS G++ D + V +L AC+ + G EI
Sbjct: 506 ----FS----------------------GIMPDDVTFVGVLSACSYTGNVKKGLEIFNS- 538
Query: 419 LRMGVQMDKKL--ISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMI-ACYAH 470
+ Q+++K+ + +VD+ + G + A ++I + +E D +++ ++ AC H
Sbjct: 539 METKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTH 594
>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
Length = 720
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 191/657 (29%), Positives = 317/657 (48%), Gaps = 64/657 (9%)
Query: 16 AIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQA 75
+++A L ++ + + ++R +FDE P R W IS C +
Sbjct: 36 SLEARLATVPHERASVLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGCAR------- 88
Query: 76 RSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLC 135
G AD ++ F EM + E + F + + + C
Sbjct: 89 -------------------------RGRYADGMRAFAEMLAEGEAT-PNAFVLAAVVRCC 122
Query: 136 VKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISK 195
+ +V G+++H +M++ ++++DMY+KC +E A RVF G E + +S
Sbjct: 123 AGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVF-GAMAERDAVSW 181
Query: 196 NAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGV 255
N + AC + G++ +++ F P L D SWNT+ISG +++G A + L RM + GV
Sbjct: 182 NIAIGACIQSGDILGSMQLFDESP-LRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGV 240
Query: 256 RWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAES 315
+N +T+++A L +++H VL L + FV S ++D+YCKC + A S
Sbjct: 241 VFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAAS 300
Query: 316 MLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEAL 375
+ H+ LT W+ + +GYV+ E
Sbjct: 301 VF----------------------------DHWSPLTRDMNFAWSTMVAGYVQNGREEEA 332
Query: 376 FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVD 435
DL + +EGV D L + ACA + G+++H + ++ ++D L S +VD
Sbjct: 333 LDLFRRML-REGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVD 391
Query: 436 MYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVT 495
MY+KCGN+ A IF +++ ++ M+ YA HG AI LFE M + + P+ +T
Sbjct: 392 MYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEIT 451
Query: 496 FVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSI 555
V +LSA H G V GE YF M +Y I P +HY C++DLYGR+ L+KA F++
Sbjct: 452 LVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEEN 511
Query: 556 PTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMG 615
+A++ + L+ CRL+++ E A A EKL++LE + YV L+N+YA W +
Sbjct: 512 NINHEAIVWKTLLSACRLHQHNEYAKLASEKLVQLEQCDAGSYVMLSNIYATNNKWHDTF 571
Query: 616 RIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
+R M+ K + G SW+++++ +H F GD SHP++ IY+ L L EI
Sbjct: 572 ELRVSMQERKVRKQPGRSWIHLKNTVHTFVAGDASHPQSAEIYAYLEKLVERLKEIG 628
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/479 (27%), Positives = 217/479 (45%), Gaps = 73/479 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H ++ G+ L + N ++ +Y+K +R++F M ER+ SWN I ACI+S D+
Sbjct: 135 HGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSWNIAIGACIQSGDI 194
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+ LFD SP +D ++N+++ G + + G+ ADAL M A + + +T ++
Sbjct: 195 LGSMQLFDESPLRDTTSWNTIISGLMRS-GHAADALSHLRRMAQAG--VVFNHYTYSTAF 251
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
L LL GRQLH ++ + + F SSL+DMY KC E A VF+
Sbjct: 252 VLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFD-------- 303
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
W + +W+T+++GYVQNG EE L LF RM
Sbjct: 304 ----------------------HWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLR 341
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
GV + T S +AC + V+ +++H V K + ++S IVD+Y KC
Sbjct: 342 EGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKC----- 396
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
GN+E+AR FD KN+ VWT++ Y
Sbjct: 397 --------------------------GNLEDARSIFDRACTKNIAVWTSMLCSYASHGQG 430
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM----GVQMDKK 428
+L E +T E + + + LV +L AC+ + G+ Y +M G+ +
Sbjct: 431 RIAIELF-ERMTAEKMTPNEITLVGVLSACSHVGLVSEGE---LYFKQMQEEYGIVPSIE 486
Query: 429 LISTLVDMYSKCGNMTYAE-IIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
+ +VD+Y + G + A+ I +N I + +++ +++ H H E A L E++++
Sbjct: 487 HYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSACRLHQHNEYAKLASEKLVQ 545
>gi|108710611|gb|ABF98406.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 787
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 202/628 (32%), Positives = 334/628 (53%), Gaps = 12/628 (1%)
Query: 44 SRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGY 103
+R+LFD MPER+V S+ T++ A +K ++ A L+ P + + +M+ G++ E
Sbjct: 167 ARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFFTAMIAGFVLNE-L 225
Query: 104 EADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV 163
DAL +F EM S + +E T+ S + C+ + +K++ V
Sbjct: 226 PKDALGVFHEMLSCG--VSPNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDKNLGV 283
Query: 164 -SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN 222
+SLI +Y + + A R+F+ E +++S A++ G++E A + PE N
Sbjct: 284 RNSLITLYLRKGDADAARRMFDE-MEVRDVVSWTALLDVYAELGDLEGARRVLDEMPERN 342
Query: 223 DAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIH 282
+ VSW TL++ + Q G+A+E + L+ +M +G R N F+S L AC L++++ ++IH
Sbjct: 343 E-VSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLGACASLQDLRSGRKIH 401
Query: 283 SWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNME 342
+ LK +N FVSS ++D+YCKC+ + A+ + +N +S+I GYS M
Sbjct: 402 NQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMV 461
Query: 343 EARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF--VTKEGVVTDALILVILLG 400
EA F + +NV W ++ SGY AQN D L F + G + +L
Sbjct: 462 EAEELFKKMPARNVASWNSIISGY--AQN-RQFIDALKSFHAMLASGQSPGEITFSSVLL 518
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL 460
ACA +L GK +HA I+++G++ + + L DMY+K G++ ++ +F +R+ V
Sbjct: 519 ACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDVA 578
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
+ MI A +G E++ILLFE+M+ GI P+ TF+AIL A H G VE YF M
Sbjct: 579 WTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFEMMQ 638
Query: 521 ADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELA 580
A ISP+ HY CM+D+ RA L +A + + I ++ +A + L+ C + RN E+
Sbjct: 639 A-CGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANSWAALLSACNIYRNKEMG 697
Query: 581 GEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHE 640
A ++L L+ +N A YV L+N+YA+ G W + +R M+G+ + GCSWV + +
Sbjct: 698 ERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEMRILMKGINLKKDGGCSWVQIRGQ 757
Query: 641 IHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
F + HP +Y +L + T EL
Sbjct: 758 YQAFFSWETKHPLLPDVYEMLDLLTWEL 785
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 204/424 (48%), Gaps = 47/424 (11%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLV 88
N LI +Y + +R++FDEM R+V SW ++ + DL+ AR + D P ++ V
Sbjct: 285 NSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARRVLDEMPERNEV 344
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLH 148
++ +++ + +G +A+ L+ +M + + R + +S L C L ++ GR++H
Sbjct: 345 SWGTLVARH-EQKGNAKEAVSLYSQMLA--DGCRPNISCFSSVLGACASLQDLRSGRKIH 401
Query: 149 AFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEM 208
+K + + F S+LIDMY KC+ +A +F ++ N++ N++++ +M
Sbjct: 402 NQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQK-NIVCWNSLISGYSNNSKM 460
Query: 209 EMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSA 268
A + F + P N A SWN++ISGY QN + LK F M +G E TF+S L A
Sbjct: 461 VEAEELFKKMPARNVA-SWNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLA 519
Query: 269 CCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSI 328
C L +++ K +H+ ++K G+ + FV + + D+Y K
Sbjct: 520 CASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAK---------------------- 557
Query: 329 SSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGV 388
G+++ ++R F + ++N V WTA+ G + E LL E + G+
Sbjct: 558 ---------SGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESI-LLFEDMISAGI 607
Query: 389 VTDALILVILLGACALQAALHPGKEIHA--YILRM---GVQMDKKLISTLVDMYSKCGNM 443
+ + +L AC+ H G HA Y M G+ K + +VD+ ++ G++
Sbjct: 608 TPNEQTFLAILFACS-----HSGLVEHAMHYFEMMQACGISPKAKHYTCMVDVLARAGHL 662
Query: 444 TYAE 447
AE
Sbjct: 663 AEAE 666
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 160/350 (45%), Gaps = 37/350 (10%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L+ H Q +K + ++ LI +Y K L +++ +F +P++N+ WN++IS
Sbjct: 393 DLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIVCWNSLIS 452
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
+ + +A LF P +++ ++NS++ GY + DALK F M ++ +
Sbjct: 453 GYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQF-IDALKSFHAMLASGQSP--G 509
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
E T +S L C L ++ G+ +HA ++K S F ++L DMY+K
Sbjct: 510 EITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAK------------ 557
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
G+++ + + F+ P+ ND V+W +I G +NG AEE +
Sbjct: 558 --------------------SGDLDSSKRVFYEMPKRND-VAWTAMIQGLAENGFAEESI 596
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
LF M G+ NE TF + L AC V+ A + G+ + +VDV
Sbjct: 597 LLFEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFEMMQACGISPKAKHYTCMVDVL 656
Query: 305 CKCENMNYAESMLL-LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
+ ++ AE +LL ++ + S ++++ ++ N E R L E
Sbjct: 657 ARAGHLAEAEDLLLKIESKSEANSWAALLSACNIYRNKEMGERAAKRLQE 706
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 145/348 (41%), Gaps = 67/348 (19%)
Query: 321 GVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN--------- 371
G + F+ M+ + G++ ARR FD + E++VV +T + +K +
Sbjct: 144 GAASPFAYDFMVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYR 203
Query: 372 ----CEALF--DLLSEFVTKE---------------GVVTDALILVILLGAC-------- 402
C F +++ FV E GV + + LV ++ AC
Sbjct: 204 QCPLCSVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDL 263
Query: 403 -------ALQA--------------ALHPGKEIHAYILRMGVQMDKKLI---STLVDMYS 438
A+++ L+ K RM +M+ + + + L+D+Y+
Sbjct: 264 AMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYA 323
Query: 439 KCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVA 498
+ G++ A + ER+ V + ++A + G+ ++A+ L+ +ML G +P+ F +
Sbjct: 324 ELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSS 383
Query: 499 ILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE 558
+L A + G K N T S + +ID+Y + QL A S+P +
Sbjct: 384 VLGACASLQDLRSGRKIHNQ-TLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLP-Q 441
Query: 559 EDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYA 606
++ V S ++ + N+++ EAEE ++ N A + + + YA
Sbjct: 442 KNIVCWNSLIS--GYSNNSKMV-EAEELFKKMPARNVASWNSIISGYA 486
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 191/590 (32%), Positives = 313/590 (53%), Gaps = 37/590 (6%)
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
++ AR +FD PH D + S + Y + +AL+ F+ M ++R+ FT+
Sbjct: 46 IQYARQVFDQIPHPDQGVHCSFITAY-SRLSLNNEALRTFVSMHQ--NNVRIVCFTIPPI 102
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
C LL + G+Q+H+ +++ +S F ++LI+ Y+K A +F+G + +
Sbjct: 103 FKSCASLLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVK-D 161
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
I+ N +++A R GE+ A + F + + VSWN +IS Y QNGD +G +F RM
Sbjct: 162 TIAYNCLISAYSRSGEVLAARELFDKMRD-RSIVSWNAMISCYAQNGDYHKGWIIFQRMQ 220
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
+ NE T A+ LS C L +++ I L SN VS+ ++++Y KC
Sbjct: 221 DEMCEPNEITLATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKC---- 276
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
G +++ R FD + ++VV W+A+ +GY +
Sbjct: 277 ---------------------------GAVDDGRLVFDHMARRDVVTWSAMIAGYAQNGR 309
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
+L + + + + + LV +L ACA ++ G+ I +Y+ G+ + + S
Sbjct: 310 SNEALELFENMKSAQ-IKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLISNVYVAS 368
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
L+ MYSKCGN+ A IF +RD V +N MI A +G E AI L+ M E +KP
Sbjct: 369 ALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKP 428
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
+ +TFV +++A H G VE+G ++F SM +D+ ISP +H+AC++DL+ R+ +L A EF
Sbjct: 429 NNITFVGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACIVDLFCRSGRLIDAYEF 488
Query: 552 MKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNW 611
+ + E + VI G+ L+ R++ N ELA A +KLL LE +N YV L+N+YA+ G W
Sbjct: 489 ICRMEVEPNVVIWGTLLSASRIHLNVELAELAGKKLLELEPDNSGNYVILSNIYASAGRW 548
Query: 612 AEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
E ++RK M+ + + A SWV VE +H F VGD SHP+++ +YS +
Sbjct: 549 QEALKVRKLMKDKRVQKAAAYSWVEVEDRVHKFLVGDTSHPRSDEVYSTI 598
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 124/494 (25%), Positives = 227/494 (45%), Gaps = 78/494 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H I+ G + N LI+ Y+K N L + +FD + ++ ++N +ISA +S ++
Sbjct: 119 HSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAYNCLISAYSRSGEV 178
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
AR LFD + +V++N+M+ Y Y + +F MQ DE +E T+ + L
Sbjct: 179 LAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWI-IFQRMQ--DEMCEPNEITLATVL 235
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
++C KL ++ G ++ + ++ +++++MY KC ++ VF+
Sbjct: 236 SICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFD-------- 287
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
MA + D V+W+ +I+GY QNG + E L+LF M
Sbjct: 288 ----------------HMARR---------DVVTWSAMIAGYAQNGRSNEALELFENMKS 322
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
++ N+ T S LSAC L +V+ + I S+V GLISN +V+S ++ +Y KC
Sbjct: 323 AQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLISNVYVASALLGMYSKC----- 377
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK---A 369
GN+ +AR+ FD L +++ V W ++ G A
Sbjct: 378 --------------------------GNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFA 411
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR-MGVQMDKK 428
++ AL++ + E K +T V L+ AC + G E + + + +
Sbjct: 412 EDAIALYNRMKEIEVKPNNIT----FVGLMTACTHAGHVELGLEFFRSMRSDHNISPNIE 467
Query: 429 LISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
+ +VD++ + G + A E I + +E ++V++ +++ H + E A L +++LE
Sbjct: 468 HFACIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSASRIHLNVELAELAGKKLLE- 526
Query: 488 GIKPDAVTFVAILS 501
++PD ILS
Sbjct: 527 -LEPDNSGNYVILS 539
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 113/265 (42%), Gaps = 29/265 (10%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
M+S +K + V + A L ++ T + I Y ESR L NV+ +
Sbjct: 320 MKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYV------ESRGLIS-----NVYVAS 368
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
++ K ++ +AR +FD P +D VT+NSM+ G + G+ DA+ L+ M+ +
Sbjct: 369 ALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMG-LAINGFAEDAIALYNRMKEIE-- 425
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFA-VSSLIDMYSKCR----- 174
++ + T + C +V G + M N + + ++D++ CR
Sbjct: 426 VKPNNITFVGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACIVDLF--CRSGRLI 483
Query: 175 -CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISG 233
YE CR+ E N++ +++A +E+A + EL S N +I
Sbjct: 484 DAYEFICRM----EVEPNVVIWGTLLSASRIHLNVELAELAGKKLLELEPDNSGNYVILS 539
Query: 234 --YVQNGDAEEGLKLFVRMGENGVR 256
Y G +E LK+ M + V+
Sbjct: 540 NIYASAGRWQEALKVRKLMKDKRVQ 564
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 211/652 (32%), Positives = 316/652 (48%), Gaps = 71/652 (10%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K+ + +T +N I +YSK NLL + F++ E NVFS+N +I+A K +
Sbjct: 31 HTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQTHEPNVFSFNALIAAYAKESLI 90
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
A LFD P DLV++N+++ Y + G AL LF EM+ + MD FT + +
Sbjct: 91 HVAHHLFDQIPQPDLVSFNTLINAYAD-RGDTLSALSLFGEMREMG--LVMDGFTFSGVI 147
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C +VG RQLH+ + D+ +SL+ YSK EEA VF G EEV
Sbjct: 148 TACCN--HVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEAEMVFNGMGEEVR- 204
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
D VSWN++I Y Q+ + L L+ M
Sbjct: 205 ------------------------------DEVSWNSMIVAYGQHKRGLKALALYRDMVH 234
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G + T AS L+ + ++ + H+ +K G N V SG++D+Y KC
Sbjct: 235 RGFEIDMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKC----- 289
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
M E+R+ F+ + ++VVW + SGY +QN
Sbjct: 290 -------------------------GAGMSESRKVFEEICGSDLVVWNTMISGY--SQNK 322
Query: 373 EALFDLLSEF--VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
E + L F + + G D V + AC+ ++ GK+ HA ++ + ++ +
Sbjct: 323 ELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQISV 382
Query: 431 S-TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+ LV MYSKCGN+ A +FQ + + V N +IA YA HG +++ LFE+ML I
Sbjct: 383 NNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASI 442
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
P ++T V+ILSA H G VE G+KYFN M + I PE +HY+CMIDL GRA +L +A
Sbjct: 443 APTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAE 502
Query: 550 EFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEG 609
+ ++P + + L CR N ELA +A + L+LE N Y+ LA++Y+A
Sbjct: 503 RLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNAVPYIMLASMYSAAR 562
Query: 610 NWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
W E RIRK MR + GCSW+ + +H+F D SHP+ I+ L
Sbjct: 563 KWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDNSHPRIKEIHMYL 614
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/442 (26%), Positives = 202/442 (45%), Gaps = 43/442 (9%)
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L C+ ++ G+ LH +K+ +S + + I +YSKC A F T E N
Sbjct: 15 LKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQ-THEPN 73
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
+ S NA++AA +E + +A F + P+ D VS+NTLI+ Y GD L LF M
Sbjct: 74 VFSFNALIAAYAKESLIHVAHHLFDQIPQ-PDLVSFNTLINAYADRGDTLSALSLFGEMR 132
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
E G+ + TF+ ++ACC +V +++HS +G D Y +N
Sbjct: 133 EMGLVMDGFTFSGVITACCN--HVGLIRQLHSLAFSSGF-----------DSYVSVKN-- 177
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE--KNVVVWTALFSGYVKA 369
S++ YS G +EEA F+ + E ++ V W ++ Y +
Sbjct: 178 ------------------SLLTYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQH 219
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
+ L + V + G D L +L + L G + HA ++ G ++ +
Sbjct: 220 KRGLKALALYRDMVHR-GFEIDMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHV 278
Query: 430 ISTLVDMYSKCG-NMTYAEIIFQNFIERDLVLYNVMIACYAHHGH-EEKAILLFEEMLEK 487
S L+DMY+KCG M+ + +F+ DLV++N MI+ Y+ + +A+ F +M
Sbjct: 279 GSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRA 338
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKI-SPETDHYACMIDLYGRANQLE 546
G PD +FV +SA + S G K F+++ +I S + ++ +Y + L+
Sbjct: 339 GYWPDDCSFVCAISACSNLSSPSQG-KQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQ 397
Query: 547 KAIEFMKSIPTEEDAVILGSFL 568
A + + +P + + V L S +
Sbjct: 398 DARKLFQRMP-QHNTVTLNSII 418
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 117/249 (46%), Gaps = 5/249 (2%)
Query: 257 WNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESM 316
W +F L +C +++ K +H+ LK+ + S+ ++S+ + +Y KC + A
Sbjct: 6 WTLQSFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHA 65
Query: 317 LLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALF 376
N FS +++I Y+ + + A FD + + ++V + L + Y + +
Sbjct: 66 FNQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSAL 125
Query: 377 DLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDM 436
L E + + G+V D ++ AC L +++H+ G + ++L+
Sbjct: 126 SLFGE-MREMGLVMDGFTFSGVITACCNHVGLI--RQLHSLAFSSGFDSYVSVKNSLLTY 182
Query: 437 YSKCGNMTYAEIIFQNFIE--RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAV 494
YSK G + AE++F E RD V +N MI Y H KA+ L+ +M+ +G + D
Sbjct: 183 YSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMF 242
Query: 495 TFVAILSAF 503
T ++L+ F
Sbjct: 243 TLASVLTTF 251
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 199/661 (30%), Positives = 326/661 (49%), Gaps = 100/661 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K GL L + N L+ +YSK + + +F ++ +V SWN II+ C+ HD
Sbjct: 206 HGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVL-HDC 264
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
DL AL L EM+ + R + FT++S L
Sbjct: 265 ------------NDL-------------------ALMLLDEMKGSG--TRPNMFTLSSAL 291
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C + GRQLH+ ++K + FA L+DMYSKC ++A R ++ ++
Sbjct: 292 KACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKK--- 348
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
D ++WN LISGY Q GD + + LF +M
Sbjct: 349 ------------------------------DIIAWNALISGYSQCGDHLDAVSLFSKMFS 378
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+ +N+ T ++ L + L+ +K K+IH+ +K+G+ S+ +V + ++D Y KC +++
Sbjct: 379 EDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDE 438
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
A + + + + +SMI YS G+ EEA + Y++ Q+
Sbjct: 439 ASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKL------------------YLQMQDA 480
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
+ + D I LL ACA +A GK++H + ++ G D ++
Sbjct: 481 D--------------IKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNS 526
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
LV+MY+KCG++ A+ F R +V ++ MI YA HGH ++A+ LF +ML G+ P+
Sbjct: 527 LVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPN 586
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
+T V++L A H G V G++YF M + I P +HYACMIDL GR+ +L +A+E +
Sbjct: 587 HITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELV 646
Query: 553 KSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWA 612
SIP E D + G+ L R+++N EL +A + L LE +V LAN+YA+ G W
Sbjct: 647 NSIPFEADGFVWGALLGAARIHKNIELGQKAAKMLFDLEPEKSGTHVLLANIYASAGMWE 706
Query: 613 EMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
+ ++RK M+ K + G SW+ ++ +++ F VGD SH +++ IY+ L G+L A
Sbjct: 707 NVAKVRKFMKDSKVKKEPGMSWIEIKDKVYTFIVGDRSHSRSDEIYAKLDQL-GDLLSKA 765
Query: 673 G 673
G
Sbjct: 766 G 766
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 150/558 (26%), Positives = 246/558 (44%), Gaps = 106/558 (18%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R LN+ + H A+ G N L+ +Y+K LL +SR+LF + ERNV SWN
Sbjct: 96 RDLNMGRKV--HGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNA 153
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+ S ++S LCG +A+ LF EM + I
Sbjct: 154 LFSCYVQSE-----------------------LCG---------EAVGLFKEMVRSG--I 179
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+EF+++ LN C L GR++H M+K D F+ ++L+DMYSK E A
Sbjct: 180 MPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVA 239
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
VF+ P++ VSWN +I+G V + +
Sbjct: 240 VFQDIA------------------------------HPDV---VSWNAIIAGCVLHDCND 266
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
L L M +G R N T +SAL AC + + +++HS ++K S+ F + G+V
Sbjct: 267 LALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLV 326
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D+Y KCE M++ARR +DS+ +K+++ W A
Sbjct: 327 DMYSKCE-------------------------------MMDDARRAYDSMPKKDIIAWNA 355
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
L SGY + + L S+ +++ + +L +LQ A+ K+IH ++
Sbjct: 356 LISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQ-AIKVCKQIHTISIKS 414
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
G+ D +I++L+D Y KC ++ A IF+ DLV Y MI Y+ +G E+A+ L+
Sbjct: 415 GIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLY 474
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA--CMIDLY 539
+M + IKPD ++L+A + + E G++ K D +A ++++Y
Sbjct: 475 LQMQDADIKPDPFICSSLLNACANLSAYEQGKQLH---VHAIKFGFMCDIFASNSLVNMY 531
Query: 540 GRANQLEKAIEFMKSIPT 557
+ +E A IP
Sbjct: 532 AKCGSIEDADRAFSEIPN 549
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/416 (28%), Positives = 198/416 (47%), Gaps = 70/416 (16%)
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
+LHA ++K + L+ +YSKCR + A ++ + +E
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSEL---------------- 45
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASA 265
D VSW++L+SGYVQNG EE L +F M GV+ NE TF S
Sbjct: 46 -----------------DVVSWSSLLSGYVQNGFVEEALLVFNEMCLLGVKCNEFTFPSV 88
Query: 266 LSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNS 325
L AC R++ +++H + G S+ FV++ +V +Y KC
Sbjct: 89 LKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKC------------------ 130
Query: 326 FSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTK 385
G ++++RR F + E+NVV W ALFS YV+++ C L E V +
Sbjct: 131 -------------GLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMV-R 176
Query: 386 EGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTY 445
G++ + + I+L ACA G++IH +L+MG+ +D+ + LVDMYSK G +
Sbjct: 177 SGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEG 236
Query: 446 AEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRH 505
A +FQ+ D+V +N +IA H + A++L +EM G +P+ T + L A
Sbjct: 237 AVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAA 296
Query: 506 CGSVEMGEKYFNSMTADYKISPETDHYAC--MIDLYGRANQLEKAIEFMKSIPTEE 559
G E+G + +S+ K+ +D +A ++D+Y + ++ A S+P ++
Sbjct: 297 MGFKELGRQLHSSLI---KMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKD 349
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 140/559 (25%), Positives = 236/559 (42%), Gaps = 105/559 (18%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H IK G + N L+ +YSK +RKL DE E +V SW++++S
Sbjct: 4 HAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLS-------- 55
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
GY+ G+ +AL +F EM ++ +EFT S L
Sbjct: 56 -----------------------GYVQ-NGFVEEALLVFNEMCLLG--VKCNEFTFPSVL 89
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C ++ GR++H V T ++ GF ++L+ MY+KC +++ R+F G E
Sbjct: 90 KACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVER--- 146
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+ VSWN L S YVQ+ E + LF M
Sbjct: 147 ------------------------------NVVSWNALFSCYVQSELCGEAVGLFKEMVR 176
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+G+ NE + + L+AC GL+ ++IH +LK GL + F ++ +VD+Y K
Sbjct: 177 SGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKA----- 231
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G +E A F + +VV W A+ +G V +C
Sbjct: 232 --------------------------GEIEGAVAVFQDIAHPDVVSWNAIIAGCV-LHDC 264
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
L +L + + G + L L ACA G+++H+ +++M D
Sbjct: 265 NDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVG 324
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
LVDMYSKC M A + + ++D++ +N +I+ Y+ G A+ LF +M + I +
Sbjct: 325 LVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFN 384
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA--CMIDLYGRANQLEKAIE 550
T +L + ++++ ++ T K +D Y ++D YG+ N +++A +
Sbjct: 385 QTTLSTVLKSVASLQAIKVCKQIH---TISIKSGIYSDFYVINSLLDTYGKCNHIDEASK 441
Query: 551 FMKSIPTEEDAVILGSFLN 569
+ T ED V S +
Sbjct: 442 IFEE-RTWEDLVAYTSMIT 459
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 141/298 (47%), Gaps = 41/298 (13%)
Query: 280 EIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQG 339
E+H+ ++K G +P + + +V +Y KC YA
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYA-------------------------- 35
Query: 340 NMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILL 399
R+ D +E +VV W++L SGYV+ E + +E GV + +L
Sbjct: 36 -----RKLVDESSELDVVSWSSLLSGYVQNGFVEEALLVFNEMCLL-GVKCNEFTFPSVL 89
Query: 400 GACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLV 459
AC+++ L+ G+++H + G + D + +TLV MY+KCG + + +F +ER++V
Sbjct: 90 KACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVV 149
Query: 460 LYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSM 519
+N + +CY +A+ LF+EM+ GI P+ + IL+A ++G K M
Sbjct: 150 SWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLM 209
Query: 520 TADYKISPETDHYA--CMIDLYGRANQLEKAIEFMKSIPTEE----DAVILGSFLNVC 571
K+ + D ++ ++D+Y +A ++E A+ + I + +A+I G L+ C
Sbjct: 210 L---KMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDC 264
>gi|356509350|ref|XP_003523413.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial-like [Glycine max]
Length = 678
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 199/664 (29%), Positives = 345/664 (51%), Gaps = 39/664 (5%)
Query: 6 LKEALICHVQAIKAGLTLTTITT-NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT--- 61
L+E HV +K G+ +++ N+L+ +YS+ L+++ LFDEMP+ N FSWNT
Sbjct: 16 LREGRQLHVAFLKTGILNSSVAVANRLLQLYSRCRNLQDASHLFDEMPQTNSFSWNTLVQ 75
Query: 62 ----------------------------IISACIKSHDLKQARSLFDSSPHKDLVTYNSM 93
++SA KS L+ A SLF++ P K+ + +NS+
Sbjct: 76 AHLNSGHTHSALHLFNAMPHKTHFSWNMVVSAFAKSGHLQLAHSLFNAMPSKNHLVWNSI 135
Query: 94 LCGYINAEGYEADALKLFIEMQ-SADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHA--F 150
+ Y + G+ AL LF M + + D F + + L C L + G+Q+HA F
Sbjct: 136 IHSY-SRHGHPGKALFLFKSMNLDPSQIVYRDAFVLATALGACADSLALNCGKQVHARVF 194
Query: 151 MVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEM 210
+ + SSLI++Y KC + A R+ +V+ S +A+++ G M
Sbjct: 195 VDGMGLELDRVLCSSLINLYGKCGDLDSAARIVS-FVRDVDEFSLSALISGYANAGRMRE 253
Query: 211 ALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACC 270
A F + + AV WN++ISGYV NG+ E + LF M NGV+ + A+ LSA
Sbjct: 254 ARSVFDSKVD-PCAVLWNSIISGYVSNGEEVEAVNLFSAMLRNGVQGDASAVANILSAAS 312
Query: 271 GLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISS 330
GL V+ K++H + K G+ + V+S ++D Y KC++ A + ++ +++
Sbjct: 313 GLLVVELVKQMHVYACKAGVTHDIVVASSLLDAYSKCQSPCEACKLFSELKEYDTILLNT 372
Query: 331 MIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVT 390
MI YS G +E+A+ F+++ K ++ W ++ G + ++ S+ + K +
Sbjct: 373 MITVYSNCGRIEDAKLIFNTMPSKTLISWNSILVGLTQNACPSEALNIFSQ-MNKLDLKM 431
Query: 391 DALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIF 450
D ++ ACA +++L G+++ + +G++ D+ + ++LVD Y KCG + +F
Sbjct: 432 DRFSFASVISACACRSSLELGEQVFGKAITIGLESDQIISTSLVDFYCKCGFVEIGRKVF 491
Query: 451 QNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVE 510
++ D V +N M+ YA +G+ +A+ LF EM G+ P A+TF +LSA H G VE
Sbjct: 492 DGMVKTDEVSWNTMLMGYATNGYGIEALTLFCEMTYGGVWPSAITFTGVLSACDHSGLVE 551
Query: 511 MGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNV 570
G F++M Y I+P +H++CM+DL+ RA E+A++ ++ +P + DA + S L
Sbjct: 552 EGRNLFHTMKHSYNINPGIEHFSCMVDLFARAGYFEEAMDLIEEMPFQADANMWLSVLRG 611
Query: 571 CRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFA 630
C + N + A E++++LE N Y+QL+N+ A+ G+W +R+ MR +
Sbjct: 612 CIAHGNKTIGKMAAEQIIQLEPENTGAYIQLSNILASSGDWEGSALVRELMRDKHFQKIP 671
Query: 631 GCSW 634
GCSW
Sbjct: 672 GCSW 675
>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
Length = 1048
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 223/728 (30%), Positives = 347/728 (47%), Gaps = 140/728 (19%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L L+ H QAIK GL + LI++Y+K + ++K+FD + ERN
Sbjct: 365 LNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERN---------- 414
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
LV +N+ML GY GY + +KLF EM+ DE
Sbjct: 415 ---------------------LVLWNAMLGGYAQ-NGYASKVMKLFSEMRGCG--FWPDE 450
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
FT TS L+ C L + GRQLH+F++K + + + F ++L+DMY+KC EEA + FE
Sbjct: 451 FTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFE- 509
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
F R D VSWN +I GYVQ D +E
Sbjct: 510 -----------------------------FIRN---RDNVSWNAIIVGYVQEEDEDEAFN 537
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
+F RM +G+ +E + AS LS C L+ ++ +++H +++K+GL + + S ++D+Y
Sbjct: 538 MFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYV 597
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEA--------------------- 344
KC + A + R+ S++++I GY+ Q ++ EA
Sbjct: 598 KCGAIEAARYVFSCMPSRSVVSMNAIIAGYA-QNDLVEAIDLFQEMQNEGLNPSEITFAS 656
Query: 345 -------------RRHFDSLTEKNVVVWTALFSG------YVKAQNCEALFDLLSEFV-- 383
R L +K +++ F G Y+ +Q L SEF
Sbjct: 657 LLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYP 716
Query: 384 -------------TKEGVVTDALIL----------------VILLGACALQAALHPGKEI 414
T+ G +AL L +L AC++ A+L G+ I
Sbjct: 717 KSTILWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMI 776
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER-DLVLYNVMIACYAHHGH 473
H+ I +G+ D+ S +VDMY+KCG+M + +F+ + D++ +N MI +A +G+
Sbjct: 777 HSLIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGY 836
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA 533
E A+ +F+EM I+PD VTF+ +L+A H G V G + F+ M YKI P DH A
Sbjct: 837 AENALKIFDEMKHTRIRPDDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKIVPRLDHCA 896
Query: 534 CMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGN 593
CMIDL GR L++A EF+ + E +A+I + L CR++ + A EKL+ LE
Sbjct: 897 CMIDLLGRWGFLKEAEEFIDKLNFEPNAMIWATLLGACRIHGDDIRGRRAAEKLIELEPE 956
Query: 594 NKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPK 653
N + YV L+N+YAA GNW E+ +R+ MR + GCSW+ V + ++F GD HP
Sbjct: 957 NSSPYVLLSNIYAASGNWDEVNSVRRAMREKGLRKLPGCSWIVVGQKTNLFVAGDKFHPS 1016
Query: 654 TNAIYSVL 661
I+++L
Sbjct: 1017 AGEIHALL 1024
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 144/525 (27%), Positives = 239/525 (45%), Gaps = 104/525 (19%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN------------ 60
H IK G + LI +YSK L ++RK+FD + + + SW
Sbjct: 205 HCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLP 264
Query: 61 -----------------------TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGY 97
T+I+AC+ L A LF P+ ++V +N M+ G+
Sbjct: 265 EEALKVFEDMQKLGLVPDQVAFVTVITACVGLGRLDDACDLFVQMPNTNVVAWNVMISGH 324
Query: 98 INAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSND 157
+ G + +A+ F M ++ T+ S L+ L + +G +HA +K +
Sbjct: 325 VK-RGCDIEAIDFFKNMWKTG--VKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLN 381
Query: 158 ASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWR 217
++ + SSLI+MY+KC E A +VF+ +E NL
Sbjct: 382 SNVYVGSSLINMYAKCEKMEAAKKVFDA-LDERNL------------------------- 415
Query: 218 QPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKC 277
V WN ++ GY QNG A + +KLF M G +E T+ S LSAC L ++
Sbjct: 416 -------VLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEM 468
Query: 278 AKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSL 337
+++HS+++K+ N FV + +VD+Y KC
Sbjct: 469 GRQLHSFIIKHNFEYNLFVENTLVDMYAKC------------------------------ 498
Query: 338 QGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVI 397
G +EEAR+ F+ + ++ V W A+ GYV+ ++ + F++ + +G+ D + L
Sbjct: 499 -GALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMIL-DGIAPDEVSLAS 556
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD 457
+L CA AL G+++H ++++ G+Q S+L+DMY KCG + A +F R
Sbjct: 557 ILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRS 616
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
+V N +IA YA + E AI LF+EM +G+ P +TF ++L A
Sbjct: 617 VVSMNAIIAGYAQNDLVE-AIDLFQEMQNEGLNPSEITFASLLDA 660
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 155/593 (26%), Positives = 264/593 (44%), Gaps = 110/593 (18%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H Q +K G + ++ +Y+K + + K F+++ +R++ +WN+++S + L
Sbjct: 104 HAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQGSL 163
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+Q F S + CG + ++FT L
Sbjct: 164 EQVIWCFGSLQN----------CG------------------------VSPNQFTYAIVL 189
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C +L+++ G+Q+H ++K + + F SLIDMYSKC +A ++F+ + +
Sbjct: 190 SSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVDP-DT 248
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQ------PE----------------LNDA------ 224
+S AM+A + G E ALK F P+ L+DA
Sbjct: 249 VSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITACVGLGRLDDACDLFVQ 308
Query: 225 ------VSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCA 278
V+WN +ISG+V+ G E + F M + GV+ T S LSA L +
Sbjct: 309 MPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYG 368
Query: 279 KEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQ 338
+H+ +K GL SN +V S ++++Y KCE M
Sbjct: 369 LLVHAQAIKQGLNSNVYVGSSLINMYAKCEKM---------------------------- 400
Query: 339 GNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVIL 398
E A++ FD+L E+N+V+W A+ GY + + L SE + G D +
Sbjct: 401 ---EAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSE-MRGCGFWPDEFTYTSI 456
Query: 399 LGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDL 458
L ACA L G+++H++I++ + + + +TLVDMY+KCG + A F+ RD
Sbjct: 457 LSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDN 516
Query: 459 VLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNS 518
V +N +I Y E++A +F M+ GI PD V+ +ILS + ++E GE+
Sbjct: 517 VSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCF 576
Query: 519 MTADYKISPETDHYA--CMIDLYGRANQLEKAIEFMKSIPTEE----DAVILG 565
+ K +T YA +ID+Y + +E A +P+ +A+I G
Sbjct: 577 LV---KSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAG 626
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 123/463 (26%), Positives = 210/463 (45%), Gaps = 80/463 (17%)
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
+ +HA +K + G S+++D+Y+KC
Sbjct: 101 KTIHAQTLKFGFGSKGRLGSAIVDLYAKC------------------------------- 129
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFAS 264
G +E A K F Q E D ++WN+++S Y + G E+ + F + GV N+ T+A
Sbjct: 130 -GNVEFAAKAF-NQLEKRDILAWNSVLSMYSRQGSLEQVIWCFGSLQNCGVSPNQFTYAI 187
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
LS+C L ++ K++H V+K G N F ++D+Y KC ++ A + +
Sbjct: 188 VLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPD 247
Query: 325 SFSISSMIVGYSLQGNMEEARRHFDSLTE------------------------------- 353
+ S ++MI GY G EEA + F+ + +
Sbjct: 248 TVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITACVGLGRLDDACDLFV 307
Query: 354 ----KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALH 409
NVV W + SG+VK + C+ + + K GV + L +L A A AL+
Sbjct: 308 QMPNTNVVAWNVMISGHVK-RGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALN 366
Query: 410 PGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYA 469
G +HA ++ G+ + + S+L++MY+KC M A+ +F ER+LVL+N M+ YA
Sbjct: 367 YGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYA 426
Query: 470 HHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTA---DYKIS 526
+G+ K + LF EM G PD T+ +ILSA +EMG + + + +Y +
Sbjct: 427 QNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLF 486
Query: 527 PETDHYACMIDLYGRANQLEKAIEFMKSIPTEE----DAVILG 565
E ++D+Y + LE+A + + I + +A+I+G
Sbjct: 487 VEN----TLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVG 525
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 135/283 (47%), Gaps = 43/283 (15%)
Query: 276 KCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGY 335
+ +K IH+ LK G S + S IVD+Y KC N+ +A R+ + +S++ Y
Sbjct: 98 RTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMY 157
Query: 336 SLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALIL 395
S QG++E+ V+W + QNC GV +
Sbjct: 158 SRQGSLEQ-------------VIWC-----FGSLQNC--------------GVSPNQFTY 185
Query: 396 VILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIE 455
I+L +CA + GK++H +++MG + + +L+DMYSKCG++ A IF ++
Sbjct: 186 AIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVD 245
Query: 456 RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKY 515
D V + MIA Y G E+A+ +FE+M + G+ PD V FV +++A G ++
Sbjct: 246 PDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITACVGLGRLDDACDL 305
Query: 516 FNSMTADYKISPETDHYACMIDLYG---RANQLEKAIEFMKSI 555
F M P T+ A + + G R +E AI+F K++
Sbjct: 306 FVQM-------PNTNVVAWNVMISGHVKRGCDIE-AIDFFKNM 340
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 86/202 (42%), Gaps = 35/202 (17%)
Query: 404 LQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNV 463
L A K IHA L+ G +L S +VD+Y+KCGN+ +A F +RD++ +N
Sbjct: 93 LAQASRTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNS 152
Query: 464 MIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR-----------HCGSVEMG 512
+++ Y+ G E+ I F + G+ P+ T+ +LS+ HCG ++MG
Sbjct: 153 VLSMYSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMG 212
Query: 513 EKYFNSMTA--------------------DYKISPETDHYACMIDLY---GRANQLEKAI 549
+ FNS D + P+T + MI Y G + K
Sbjct: 213 FE-FNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVF 271
Query: 550 EFMKSIPTEEDAVILGSFLNVC 571
E M+ + D V + + C
Sbjct: 272 EDMQKLGLVPDQVAFVTVITAC 293
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 103/258 (39%), Gaps = 42/258 (16%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERN-VFSWNTII 63
+L + + H GL +T + ++ +Y+K ++ S ++F+EM +N V SWN++I
Sbjct: 769 SLGDGRMIHSLIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMI 828
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
K+ GY +ALK+F EM+ IR
Sbjct: 829 VGFAKN--------------------------------GYAENALKIFDEMKHT--RIRP 854
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFA-VSSLIDMYSKCRCYEEACRV 182
D+ T L C V GR++ MV + + +ID+ + +EA
Sbjct: 855 DDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKIVPRLDHCACMIDLLGRWGFLKEAEEF 914
Query: 183 FEGCTEEVNLISKNAMVAACCREGE----MEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
+ E N + ++ AC G+ A K +PE ++ + L + Y +G
Sbjct: 915 IDKLNFEPNAMIWATLLGACRIHGDDIRGRRAAEKLIELEPE--NSSPYVLLSNIYAASG 972
Query: 239 DAEEGLKLFVRMGENGVR 256
+ +E + M E G+R
Sbjct: 973 NWDEVNSVRRAMREKGLR 990
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 189/607 (31%), Positives = 318/607 (52%), Gaps = 72/607 (11%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
+ +F N++++ KS + A+++FDS +++ V++NSM+ G++ G + +A +LF
Sbjct: 225 DSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFV-TNGLDLEAFELFY 283
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
M+ E +++ + + + LC + + F +QLH ++K +D ++L+ YSK
Sbjct: 284 RMRL--EGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSK 341
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C ++A ++F C G + + VSW +IS
Sbjct: 342 CSEIDDAFKLF------------------CMMHG--------------VQNVVSWTAIIS 369
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
GYVQNG + + LF +M GVR N T+++ L+A + +IH+ V+K +
Sbjct: 370 GYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAV----SPSQIHALVVKTNYEN 425
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
+P V + + D Y K G+ EA + F+ +
Sbjct: 426 SPSVGTALSDSYSKI-------------------------------GDANEAAKIFELID 454
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQ-AALHPG 411
EK++V W+A+ SGY + + E + + + KEGV + +L ACA A++ G
Sbjct: 455 EKDIVAWSAMLSGYAQMGDIEGAVKIFLQ-LAKEGVEPNEFTFSSVLNACAAPTASVEQG 513
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
K+ H+ ++ G + S LV MY+K GN+ A +F+ ++RDLV +N MI+ YA H
Sbjct: 514 KQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQH 573
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH 531
G +K++ +FEEM K ++ D +TF+ ++SA H G V G++YF+ M DY I P +H
Sbjct: 574 GCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEH 633
Query: 532 YACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLE 591
Y+CM+DLY RA LEKA++ + +P A I + L CR++ N +L A EKL+ L+
Sbjct: 634 YSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQ 693
Query: 592 GNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSH 651
+ A YV L+N+YA GNW E ++RK M K + AG SW+ V+++ F GD+SH
Sbjct: 694 PQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSH 753
Query: 652 PKTNAIY 658
P+++ IY
Sbjct: 754 PQSDRIY 760
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 124/502 (24%), Positives = 222/502 (44%), Gaps = 85/502 (16%)
Query: 74 QARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLN 133
++ LFD +P + L N +L + + +AL LF+ ++ + D +++ L
Sbjct: 44 HSQQLFDETPQQGLSRNNHLLFEF-SRNDQNKEALNLFLGLRRSGSPT--DGSSLSCVLK 100
Query: 134 LCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLI 193
+C L + G+Q+H +K +SL+DMY K E+ RVF+
Sbjct: 101 VCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFD--------- 151
Query: 194 SKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGEN 253
EM +K + VSW +L++GY QNG E+ LKLF +M
Sbjct: 152 ---------------EMRVK---------NVVSWTSLLAGYRQNGLNEQALKLFSQMQLE 187
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA 313
G++ N TFA+ L V+ ++H+ V+K+GL S FV + +V++Y K ++ A
Sbjct: 188 GIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDA 247
Query: 314 ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE 373
+++ RN+ S +SMI G+ G EA
Sbjct: 248 KAVFDSMENRNAVSWNSMIAGFVTNGLDLEA----------------------------- 278
Query: 374 ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL 433
F+L + EGV I ++ CA + K++H +++ G D + + L
Sbjct: 279 --FELFYR-MRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTAL 335
Query: 434 VDMYSKCGNMTYAEIIF-QNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
+ YSKC + A +F +++V + +I+ Y +G ++A+ LF +M +G++P+
Sbjct: 336 MVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPN 395
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE-----TDHYACMIDLYGRANQLEK 547
T+ IL+A +V + + + +Y+ SP +D Y+ + G AN+ K
Sbjct: 396 HFTYSTILTA---NAAVSPSQIHALVVKTNYENSPSVGTALSDSYSKI----GDANEAAK 448
Query: 548 AIEFMKSIPTEEDAVILGSFLN 569
E + E+D V + L+
Sbjct: 449 IFELID----EKDIVAWSAMLS 466
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 99/240 (41%), Gaps = 43/240 (17%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +IK+G + ++ L+ +Y+K + + ++F +R++ SWN++IS
Sbjct: 517 HSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISG------- 569
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
Y CG +LK+F EM+S +++ +D T +
Sbjct: 570 -----------------YAQHGCG--------KKSLKIFEEMRS--KNLELDGITFIGVI 602
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFA-VSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
+ C V G++ MVK + S ++D+YS+ E+A +
Sbjct: 603 SACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAG 662
Query: 192 LISKNAMVAAC-----CREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
++AAC + GE+ A K QP+ D+ ++ L + Y G+ +E K+
Sbjct: 663 ATIWRTLLAACRVHLNVQLGELA-AEKLISLQPQ--DSAAYVLLSNIYATAGNWQERAKV 719
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 201/645 (31%), Positives = 326/645 (50%), Gaps = 107/645 (16%)
Query: 30 QLIHIYSK-HNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLV 88
LI ++ K N + K+FD+M E NV +W +I+ C++
Sbjct: 207 SLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQM------------------- 247
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLH 148
G+ +A++ F++M + D+FT++S + C +L N+ G+QLH
Sbjct: 248 -------------GFPREAIRFFLDMVLSG--FESDKFTLSSVFSACAELENLSLGKQLH 292
Query: 149 AFMVKTS--NDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREG 206
++ +++ +D SL+DMY+KC +G
Sbjct: 293 SWAIRSGLVDDVE----CSLVDMYAKCSA-----------------------------DG 319
Query: 207 EMEMALKTFWRQPELNDAVSWNTLISGYVQNGD-AEEGLKLFVRMGENG-VRWNEHTFAS 264
++ K F R E + +SW LI+GY++N + A E + LF M G V N TF+S
Sbjct: 320 SVDDCRKVFDRM-EDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSS 378
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
A AC L + + K++ K GL SN V++ ++ ++ K + M
Sbjct: 379 AFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRM-------------- 424
Query: 325 SFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVT 384
E+A+R F+SL+EKN+V + G + N E F LLSE
Sbjct: 425 -----------------EDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITE 467
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
+E V+ A LL A ++ G++IH+ ++++G+ ++ + + L+ MYSKCG++
Sbjct: 468 RELGVS-AFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSID 526
Query: 445 YAEIIFQNFIE-RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAF 503
A +F NF+E R+++ + MI +A HG + + F +M+E+G+KP+ VT+VAILSA
Sbjct: 527 TASRVF-NFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSAC 585
Query: 504 RHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVI 563
H G V G ++FNSM D+KI P+ +HYACM+DL RA L A EF+ ++P + D ++
Sbjct: 586 SHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLV 645
Query: 564 LGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRG 623
+FL CR++ N EL A K+L L+ N A Y+QL+N+YA G W E +R++M+
Sbjct: 646 WRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKE 705
Query: 624 MKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
+ GCSW+ V +IH F VGD +HP + IY L E+
Sbjct: 706 RNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEI 750
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 130/510 (25%), Positives = 239/510 (46%), Gaps = 81/510 (15%)
Query: 48 FDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPH---KDLVTYNSMLCGYINAEGYE 104
FD P+ ++ N++IS KS D +A +F++ +D+V++++M+ Y N G E
Sbjct: 91 FDIEPDSVLY--NSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGN-NGRE 147
Query: 105 ADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVS 164
DA+K+F+E + + +++ T+ + C VG GR F++KT + S V
Sbjct: 148 LDAIKVFVEF--LELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVG 205
Query: 165 -SLIDMYSKCR-CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN 222
SLIDM+ K +E A +VF+ + ELN
Sbjct: 206 CSLIDMFVKGENSFENAYKVFD--------------------------------KMSELN 233
Query: 223 DAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIH 282
V+W +I+ +Q G E ++ F+ M +G ++ T +S SAC L N+ K++H
Sbjct: 234 -VVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLH 292
Query: 283 SWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNME 342
SW +++GL+ + V +VD+Y KC S G+++
Sbjct: 293 SWAIRSGLVDD--VECSLVDMYAKC----------------------------SADGSVD 322
Query: 343 EARRHFDSLTEKNVVVWTALFSGYVKAQN--CEALFDLLSEFVTKEGVVTDALILVILLG 400
+ R+ FD + + +V+ WTAL +GY+K N EA+ +L SE +T+ V +
Sbjct: 323 DCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAI-NLFSEMITQGHVEPNHFTFSSAFK 381
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL 460
AC + GK++ + G+ + + ++++ M+ K M A+ F++ E++LV
Sbjct: 382 ACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVS 441
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
YN + + + E+A L E+ E+ + A TF ++LS + GS+ GE+ + +
Sbjct: 442 YNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVV 501
Query: 521 ADYKISPETDHYAC--MIDLYGRANQLEKA 548
K+ + C +I +Y + ++ A
Sbjct: 502 ---KLGLSCNQPVCNALISMYSKCGSIDTA 528
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 110/484 (22%), Positives = 215/484 (44%), Gaps = 89/484 (18%)
Query: 112 IEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYS 171
+++ + D MD T +S L C++ + G+ +HA +++ + +SLI +YS
Sbjct: 49 LDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYS 108
Query: 172 KCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLI 231
K +A VFE ++ F ++ D VSW+ ++
Sbjct: 109 KSGDSAKAEDVFE--------------------------TMRRFGKR----DVVSWSAMM 138
Query: 232 SGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG-L 290
+ Y NG + +K+FV E G+ N++ + + + AC V + +++K G
Sbjct: 139 ACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHF 198
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
S+ V ++D++ K EN + E A + FD
Sbjct: 199 ESDVCVGCSLIDMFVKGEN------------------------------SFENAYKVFDK 228
Query: 351 LTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHP 410
++E NVV WT + + ++ + V G +D L + ACA L
Sbjct: 229 MSELNVVTWTLMITRCMQMGFPREAIRFFLDMVL-SGFESDKFTLSSVFSACAELENLSL 287
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKC---GNMTYAEIIFQNFIERDLVLYNVMIAC 467
GK++H++ +R G+ D + +LVDMY+KC G++ +F + ++ + +I
Sbjct: 288 GKQLHSWAIRSGLVDDVE--CSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITG 345
Query: 468 YAHHGH-EEKAILLFEEMLEKG-IKPDAVTFVAILSAFRHCGSVE--------MGEKYFN 517
Y + + +AI LF EM+ +G ++P+ TF SAF+ CG++ +G+ +
Sbjct: 346 YMKNCNLATEAINLFSEMITQGHVEPNHFTFS---SAFKACGNLSDPRVGKQVLGQAFKR 402
Query: 518 SMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLN-VCRLNRN 576
+ ++ ++ +I ++ +++++E A +S+ +E++ V +FL+ CR N N
Sbjct: 403 GLASNSSVA------NSVISMFVKSDRMEDAQRAFESL-SEKNLVSYNTFLDGTCR-NLN 454
Query: 577 AELA 580
E A
Sbjct: 455 FEQA 458
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 108/255 (42%), Gaps = 67/255 (26%)
Query: 15 QAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQ 74
QA K GL + N +I ++ K + + ++++ F+ + E+N+ S+NT + ++ + +Q
Sbjct: 398 QAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQ 457
Query: 75 ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNL 134
A KL E+ + + + FT S L+
Sbjct: 458 --------------------------------AFKLLSEI--TERELGVSAFTFASLLSG 483
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
+ ++ G Q+H+ +VK + ++LI MYSKC + A RVF E N+IS
Sbjct: 484 VANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFN-FMENRNVIS 542
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
W ++I+G+ ++G A L+ F +M E G
Sbjct: 543 --------------------------------WTSMITGFAKHGFAIRVLETFNQMIEEG 570
Query: 255 VRWNEHTFASALSAC 269
V+ NE T+ + LSAC
Sbjct: 571 VKPNEVTYVAILSAC 585
Score = 42.4 bits (98), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIK 68
H Q +K GL+ N LI +YSK + + ++F+ M RNV SW ++I+ K
Sbjct: 497 HSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAK 552
>gi|449443642|ref|XP_004139586.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449492832|ref|XP_004159115.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 663
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 186/658 (28%), Positives = 335/658 (50%), Gaps = 37/658 (5%)
Query: 18 KAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARS 77
K G + N +I +Y K + + + ++F + + ++FSWN +I K H++ +A
Sbjct: 21 KYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLFSWNCMIYGYSKLHEMGRAID 80
Query: 78 LFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVK 137
F P +D V++N+++ + + G +L F+EM + + + T S L+ C
Sbjct: 81 TFRQMPERDSVSWNTIISAF-SHHGLHIQSLGTFVEMWI--QGCQPNSMTYASVLSACAN 137
Query: 138 LLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNA 197
+ + +G+ LHA +V+ + L+DMY+KC + + RVF E
Sbjct: 138 IYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDASKRVFNTLRE--------- 188
Query: 198 MVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRW 257
++ V+W +LISG G EE +F +M ++ V
Sbjct: 189 ------------------------HNVVTWTSLISGIAHFGSQEEVYDIFYQMRKDCVIM 224
Query: 258 NEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESML 317
+ A+ L C G N+ +++H + +K G+ S+ V + + +Y KC + A
Sbjct: 225 DNFILATILGVCEGETNISIGEQLHGFTVKTGMNSSVPVGNATLSMYAKCGDFEKASLAF 284
Query: 318 LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFD 377
+ S ++MI +S GN+E AR +F+ + E+NV+ W A+ Y + E
Sbjct: 285 ETMAAHDVISWTTMITSFSHSGNVERARDYFNRMPERNVISWNAMLGAYCQNSFWEEGLK 344
Query: 378 LLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMY 437
L + +E V D + V ++GAC+ A G +I + +++G+ D ++++ + +Y
Sbjct: 345 LYILMLRQE-VRPDWITFVTMIGACSELAISKLGTQILSQAVKVGLGSDVSVVNSAITLY 403
Query: 438 SKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFV 497
S+CG + A+ +F + E++L+ +N ++ YA +G K I +F+ ML G KPD +T++
Sbjct: 404 SRCGRIEEAQNLFDSIQEKNLISWNSIMGGYAQNGEGMKVIEIFQNMLMAGCKPDHITYI 463
Query: 498 AILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPT 557
AILS H G V+ + +FNSMT D+ IS +H+ CM+DL+GRA L+ A++ + +P
Sbjct: 464 AILSGCSHSGLVKEAKYHFNSMTKDFGISVTLEHFVCMVDLFGRAGLLKLALDMIDQMPF 523
Query: 558 EEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRI 617
+ +A I G+ L+ CR++ + E+A A + LL L N Y+ LAN Y++ G + +
Sbjct: 524 KPNASIWGALLSACRIHHDTEMAELAMKNLLELNTENFESYILLANTYSSFGRLECVSEV 583
Query: 618 RKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIAGAF 675
R+ M+ + + GCSW+ V + +H+FT D SHP+ IY L ++ + G F
Sbjct: 584 RQVMKEKRVQKDPGCSWIEVCNRVHVFTANDTSHPQVKDIYKALEDIVKKIKDDYGYF 641
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 119/450 (26%), Positives = 203/450 (45%), Gaps = 69/450 (15%)
Query: 140 NVGFGR---QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKN 196
+VG+ R QLH K + +S+IDMY KC A +VF E+ +L S N
Sbjct: 5 SVGYIRIAHQLHGLSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLR-IEKPSLFSWN 63
Query: 197 AMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVR 256
M+ + EM A+ TF + PE D+VSWNT+IS + +G + L FV M G +
Sbjct: 64 CMIYGYSKLHEMGRAIDTFRQMPE-RDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQGCQ 122
Query: 257 WNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESM 316
N T+AS LSAC + + + K +H+ +++ + V +G+VD+Y KC
Sbjct: 123 PNSMTYASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKC--------- 173
Query: 317 LLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALF 376
G ++ ++R F++L E NVV WT+L SG + E ++
Sbjct: 174 ----------------------GLIDASKRVFNTLREHNVVTWTSLISGIAHFGSQEEVY 211
Query: 377 DLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDM 436
D+ + + K+ V+ D IL +LG C + + G+++H + ++ G+ + + + M
Sbjct: 212 DIFYQ-MRKDCVIMDNFILATILGVCEGETNISIGEQLHGFTVKTGMNSSVPVGNATLSM 270
Query: 437 YSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG-------- 488
Y+KCG+ A + F+ D++ + MI ++H G+ E+A F M E+
Sbjct: 271 YAKCGDFEKASLAFETMAAHDVISWTTMITSFSHSGNVERARDYFNRMPERNVISWNAML 330
Query: 489 -----------------------IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKI 525
++PD +TFV ++ A ++G + S +
Sbjct: 331 GAYCQNSFWEEGLKLYILMLRQEVRPDWITFVTMIGACSELAISKLGTQIL-SQAVKVGL 389
Query: 526 SPETDHYACMIDLYGRANQLEKAIEFMKSI 555
+ I LY R ++E+A SI
Sbjct: 390 GSDVSVVNSAITLYSRCGRIEEAQNLFDSI 419
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 133/282 (47%), Gaps = 4/282 (1%)
Query: 268 ACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFS 327
AC + ++ A ++H K G +N + + I+D+Y KC+ + AE + L + FS
Sbjct: 2 ACSSVGYIRIAHQLHGLSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLFS 61
Query: 328 ISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV-KAQNCEALFDLLSEFVTKE 386
+ MI GYS M A F + E++ V W + S + + ++L + ++ +
Sbjct: 62 WNCMIYGYSKLHEMGRAIDTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWI--Q 119
Query: 387 GVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYA 446
G +++ +L ACA GK +HA I+R+ +D + + LVDMY+KCG + +
Sbjct: 120 GCQPNSMTYASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDAS 179
Query: 447 EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHC 506
+ +F E ++V + +I+ AH G +E+ +F +M + + D IL
Sbjct: 180 KRVFNTLREHNVVTWTSLISGIAHFGSQEEVYDIFYQMRKDCVIMDNFILATILGVCEGE 239
Query: 507 GSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
++ +GE+ + T ++ + +Y + EKA
Sbjct: 240 TNISIGEQ-LHGFTVKTGMNSSVPVGNATLSMYAKCGDFEKA 280
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 124/267 (46%), Gaps = 36/267 (13%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K G+ + N + +Y+K ++ F+ M +V SW T+I++ S ++
Sbjct: 249 HGFTVKTGMNSSVPVGNATLSMYAKCGDFEKASLAFETMAAHDVISWTTMITSFSHSGNV 308
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
++AR F+ P ++++++N+ML Y +E + LKL+I M + +R D T + +
Sbjct: 309 ERARDYFNRMPERNVISWNAMLGAYCQNSFWE-EGLKLYILM--LRQEVRPDWITFVTMI 365
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C +L G Q+ + VK + V+S I +YS+C EEA +F+ +E NL
Sbjct: 366 GACSELAISKLGTQILSQAVKVGLGSDVSVVNSAITLYSRCGRIEEAQNLFDS-IQEKNL 424
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
I SWN+++ GY QNG+ + +++F M
Sbjct: 425 I--------------------------------SWNSIMGGYAQNGEGMKVIEIFQNMLM 452
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAK 279
G + + T+ + LS C VK AK
Sbjct: 453 AGCKPDHITYIAILSGCSHSGLVKEAK 479
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 196/652 (30%), Positives = 332/652 (50%), Gaps = 80/652 (12%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
E +VF NT++ K + ++ LFD P +++V++N++ Y+ + + +A+ LF
Sbjct: 189 EGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXD-FCGEAVGLFY 247
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
EM + I+ +EF+++S +N C L + G+ +H +++K D F+ ++L+DMY+K
Sbjct: 248 EMVLSG--IKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAK 305
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALK------------------- 213
+A VFE ++ +++S NA++A C E AL+
Sbjct: 306 VGDLADAISVFEK-IKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDME 364
Query: 214 ------------------------TFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
F PE D ++WN +ISGY Q + E L LFV
Sbjct: 365 SDLFVSVGLVDMYSKCDLLEDARMAFNLLPE-KDLIAWNAIISGYSQYWEDMEALSLFVE 423
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
M + G+ +N+ T ++ L + GL+ V +++H +K+G S+ +V + ++D Y KC +
Sbjct: 424 MHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSH 483
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
+ AE + + + S +SMI Y+ G EEA + F ++
Sbjct: 484 VEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLF------------------LEM 525
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
Q+ E + D + LL ACA +A GK++H +IL+ G +D
Sbjct: 526 QDME--------------LKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFA 571
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
++LV+MY+KCG++ A F ER +V ++ MI A HGH +A+ LF +ML++G+
Sbjct: 572 GNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGV 631
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
P+ +T V++L A H G V + YF SM + P +HYACMIDL GRA ++ +A+
Sbjct: 632 SPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAV 691
Query: 550 EFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEG 609
E + +P E +A + G+ L R++++ EL A E L LE +V LAN+YA+ G
Sbjct: 692 ELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAG 751
Query: 610 NWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
W + +R+ MR K + G SW+ V+ +++ F VGD SH ++ IY+ L
Sbjct: 752 KWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKL 803
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 149/555 (26%), Positives = 250/555 (45%), Gaps = 115/555 (20%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L+ L H K+GL+ N LI++YSK +RKL DE
Sbjct: 71 SLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDE-------------- 116
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
S DLV++++++ GY G AL F EM ++ +
Sbjct: 117 -----------------SSEPDLVSWSALISGYAQ-NGLGGGALMAFHEMHLLG--VKCN 156
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
EFT +S L C + ++ G+Q+H +V + + F ++L+ MY+KC + ++ R+F+
Sbjct: 157 EFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFD 216
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
PE N VSWN L S YVQ E +
Sbjct: 217 --------------------------------EIPERN-VVSWNALFSCYVQXDFCGEAV 243
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
LF M +G++ NE + +S ++AC GLR+ K IH +++K G +PF ++ +VD+Y
Sbjct: 244 GLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMY 303
Query: 305 CKCENM-----------------------------NYAESMLLLKGVRNSFSISSM---- 331
K ++ ++ +++ LL ++ S M
Sbjct: 304 AKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDM 363
Query: 332 ------IVG----YSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSE 381
VG YS +E+AR F+ L EK+++ W A+ SGY +Q E + + LS
Sbjct: 364 ESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGY--SQYWEDM-EALSL 420
Query: 382 FVT--KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
FV KEG+ + L +L + A +H +++H ++ G D ++++L+D Y K
Sbjct: 421 FVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGK 480
Query: 440 CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
C ++ AE IF+ DLV + MI YA +G E+A+ LF EM + +KPD ++
Sbjct: 481 CSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSL 540
Query: 500 LSAFRHCGSVEMGEK 514
L+A + + E G++
Sbjct: 541 LNACANLSAFEQGKQ 555
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 169/390 (43%), Gaps = 99/390 (25%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K + + L+ +YSK +LL ++R F+ +PE+++ +WN IIS
Sbjct: 355 HSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIIS-------- 406
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
GY + + +AL LF+EM E I ++ T+++ L
Sbjct: 407 -----------------------GY-SQYWEDMEALSLFVEMHK--EGIGFNQTTLSTIL 440
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
L V RQ+H VK+ + + V+SLID Y KC E+A R+FE CT +L
Sbjct: 441 KSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIG-DL 499
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+S +M+ A + G+ EE LKLF+ M +
Sbjct: 500 VSFTSMITAYAQYGQ--------------------------------GEEALKLFLEMQD 527
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
++ + +S L+AC L + K++H +LK G + + F + +V++Y KC
Sbjct: 528 MELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKC----- 582
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G++++A R F LTE+ +V W+A+ G + +
Sbjct: 583 --------------------------GSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHG 616
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGAC 402
L ++ + KEGV + + LV +LGAC
Sbjct: 617 RQALQLFNQML-KEGVSPNHITLVSVLGAC 645
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 152/328 (46%), Gaps = 46/328 (14%)
Query: 261 TFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLK 320
+++ LS CC ++++ +IH+ + K+GL +P + + ++++Y KC YA
Sbjct: 58 SYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYA------- 110
Query: 321 GVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLS 380
R+ D +E ++V W+AL SGY AQN L++
Sbjct: 111 ------------------------RKLVDESSEPDLVSWSALISGY--AQNGLGGGALMA 144
Query: 381 -EFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
+ GV + +L AC++ L GK++H ++ G + D + +TLV MY+K
Sbjct: 145 FHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAK 204
Query: 440 CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
C ++ +F ER++V +N + +CY +A+ LF EM+ GIKP+ + ++
Sbjct: 205 CDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSM 264
Query: 500 LSA---FRHCGSVEMGEKYFNSMTADYKISPETDHYA--CMIDLYGRANQLEKAIEFMKS 554
++A R ++ Y + D+ D ++ ++D+Y + L AI +
Sbjct: 265 VNACTGLRDSSRGKIIHGYLIKLGYDW------DPFSANALVDMYAKVGDLADAISVFEK 318
Query: 555 IPTEEDAVILGSFLNVCRLNRNAELAGE 582
I + D V + + C L+ + E A E
Sbjct: 319 I-KQPDIVSWNAVIAGCVLHEHHEQALE 345
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 124/272 (45%), Gaps = 52/272 (19%)
Query: 8 EALICHVQAIKAGL-----TLTTITTN----QLIHIYSK-HNLLRESRKLFDEMPERNVF 57
EAL V+ K G+ TL+TI + Q++H+ + H L +S +++
Sbjct: 416 EALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGF------HSDIY 469
Query: 58 SWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSA 117
N++I + K ++ A +F+ DLV++ SM+ Y G +ALKLF+EMQ
Sbjct: 470 VVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQY-GQGEEALKLFLEMQ-- 526
Query: 118 DEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYE 177
D ++ D F +S LN C L G+QLH ++K FA +SL++MY+KC +
Sbjct: 527 DMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSID 586
Query: 178 EACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQN 237
+A R F TE ++S +AM I G Q+
Sbjct: 587 DAGRAFSELTER-GIVSWSAM--------------------------------IGGLAQH 613
Query: 238 GDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
G + L+LF +M + GV N T S L AC
Sbjct: 614 GHGRQALQLFNQMLKEGVSPNHITLVSVLGAC 645
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 209/664 (31%), Positives = 333/664 (50%), Gaps = 84/664 (12%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L I H K+ + +T +N +YSK L ++ F NVFS+NT+I+
Sbjct: 24 DLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLTQYPNVFSYNTLIN 83
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
A K + AR +FD P D+V+YN+++ Y + G L+LF E++ + + +D
Sbjct: 84 AYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYAD-RGECGPTLRLFEEVR--ELRLGLD 140
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
FT++ + C +VG RQLH F+V +D
Sbjct: 141 GFTLSGVITACGD--DVGLVRQLHCFVVVCGHD--------------------------- 171
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN--DAVSWNTLISGYVQNGDAEE 242
C VN NA++A R+G + A + F E D VSWN +I Q+ + E
Sbjct: 172 -CYASVN----NAVLACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGME 226
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
+ LF M G++ + T AS L+A ++++ ++ H ++K+G N V SG++D
Sbjct: 227 AVGLFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLID 286
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
+Y KC G+M E R+ F+ +T ++V+W +
Sbjct: 287 LYSKC------------------------------AGSMVECRKVFEEITAPDLVLWNTM 316
Query: 363 FSGYVKAQNCEALFDLLSEF-------VTKEGVVTDALILVILLGACALQAALHPGKEIH 415
SG+ +L++ LSE + + G D V + AC+ ++ GK++H
Sbjct: 317 ISGF-------SLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVH 369
Query: 416 AYILRMGVQMDKKLIS-TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
A ++ V ++ ++ LV MYSKCGN+ A +F E + V N MIA YA HG E
Sbjct: 370 ALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVE 429
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC 534
+++ LFE MLEK I P+++TF+A+LSA H G VE G+KYFN M + I PE +HY+C
Sbjct: 430 VESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSC 489
Query: 535 MIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNN 594
MIDL GRA +L++A ++++P ++ + L CR + N ELA +A + LRLE N
Sbjct: 490 MIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRLEPYN 549
Query: 595 KARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKT 654
A YV L+N+YA+ W E +++ MR + GCSW+ ++ ++H+F D SHP
Sbjct: 550 AAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMI 609
Query: 655 NAIY 658
I+
Sbjct: 610 KEIH 613
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 108/448 (24%), Positives = 198/448 (44%), Gaps = 44/448 (9%)
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
T + L C+ ++ G+ LHA K+ S + + +YSKC A F
Sbjct: 11 TFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFH-L 69
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
T+ N+ S N ++ A + + +A + F P+ D VS+NTLI+ Y G+ L+L
Sbjct: 70 TQYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQ-PDIVSYNTLIAAYADRGECGPTLRL 128
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
F + E + + T + ++AC +V +++H +V+ G D Y
Sbjct: 129 FEEVRELRLGLDGFTLSGVITACGD--DVGLVRQLHCFVVVCGH-----------DCYAS 175
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE---KNVVVWTALF 363
N +++ YS +G + EARR F + E ++ V W A+
Sbjct: 176 VNN--------------------AVLACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMI 215
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
+ + L E V + G+ D + +L A L G++ H +++ G
Sbjct: 216 VACGQHREGMEAVGLFREMV-RRGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGF 274
Query: 424 QMDKKLISTLVDMYSKC-GNMTYAEIIFQNFIERDLVLYNVMIACYA-HHGHEEKAILLF 481
+ + S L+D+YSKC G+M +F+ DLVL+N MI+ ++ + E + F
Sbjct: 275 HGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCF 334
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK-YFNSMTADYKISPETDHYACMIDLYG 540
EM G +PD +FV + SA + S +G++ + ++ +D + + + A ++ +Y
Sbjct: 335 REMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNA-LVAMYS 393
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFL 568
+ + A ++P E + V L S +
Sbjct: 394 KCGNVHDARRVFDTMP-EHNTVSLNSMI 420
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 135/285 (47%), Gaps = 7/285 (2%)
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLL 319
TF + L AC R++ K +H+ K+ + + ++S+ +Y KC +++ A++ L
Sbjct: 10 QTFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHL 69
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLL 379
N FS +++I Y+ + ARR FD + + ++V + L + Y C L
Sbjct: 70 TQYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLF 129
Query: 380 SEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
E V + + D L ++ AC L +++H +++ G + + ++ YS+
Sbjct: 130 EE-VRELRLGLDGFTLSGVITACGDDVGL--VRQLHCFVVVCGHDCYASVNNAVLACYSR 186
Query: 440 CGNMTYAEIIFQNFIE---RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTF 496
G ++ A +F+ E RD V +N MI H +A+ LF EM+ +G+K D T
Sbjct: 187 KGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTM 246
Query: 497 VAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGR 541
++L+AF C +G + F+ M + + +IDLY +
Sbjct: 247 ASVLTAFT-CVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSK 290
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 201/645 (31%), Positives = 326/645 (50%), Gaps = 107/645 (16%)
Query: 30 QLIHIYSK-HNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLV 88
LI ++ K N + K+FD+M E NV +W +I+ C++
Sbjct: 207 SLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQM------------------- 247
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLH 148
G+ +A++ F++M + D+FT++S + C +L N+ G+QLH
Sbjct: 248 -------------GFPREAIRFFLDMVLSG--FESDKFTLSSVFSACAELENLSLGKQLH 292
Query: 149 AFMVKTS--NDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREG 206
++ +++ +D SL+DMY+KC +G
Sbjct: 293 SWAIRSGLVDDVE----CSLVDMYAKCSA-----------------------------DG 319
Query: 207 EMEMALKTFWRQPELNDAVSWNTLISGYVQNGD-AEEGLKLFVRMGENG-VRWNEHTFAS 264
++ K F R E + +SW LI+GY++N + A E + LF M G V N TF+S
Sbjct: 320 SVDDCRKVFDRM-EDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSS 378
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
A AC L + + K++ K GL SN V++ ++ ++ K + M
Sbjct: 379 AFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRM-------------- 424
Query: 325 SFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVT 384
E+A+R F+SL+EKN+V + G + N E F LLSE
Sbjct: 425 -----------------EDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITE 467
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
+E V+ A LL A ++ G++IH+ ++++G+ ++ + + L+ MYSKCG++
Sbjct: 468 RELGVS-AFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSID 526
Query: 445 YAEIIFQNFIE-RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAF 503
A +F NF+E R+++ + MI +A HG + + F +M+E+G+KP+ VT+VAILSA
Sbjct: 527 TASRVF-NFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSAC 585
Query: 504 RHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVI 563
H G V G ++FNSM D+KI P+ +HYACM+DL RA L A EF+ ++P + D ++
Sbjct: 586 SHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLV 645
Query: 564 LGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRG 623
+FL CR++ N EL A K+L L+ N A Y+QL+N+YA G W E +R++M+
Sbjct: 646 WRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKE 705
Query: 624 MKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
+ GCSW+ V +IH F VGD +HP + IY L E+
Sbjct: 706 RNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEI 750
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 130/510 (25%), Positives = 239/510 (46%), Gaps = 81/510 (15%)
Query: 48 FDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPH---KDLVTYNSMLCGYINAEGYE 104
FD P+ ++ N++IS KS D +A +F++ +D+V++++M+ Y N G E
Sbjct: 91 FDIEPDSVLY--NSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGN-NGRE 147
Query: 105 ADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVS 164
DA+K+F+E + + +++ T+ + C VG GR F++KT + S V
Sbjct: 148 LDAIKVFVEF--LELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVG 205
Query: 165 -SLIDMYSKCR-CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN 222
SLIDM+ K +E A +VF+ + ELN
Sbjct: 206 CSLIDMFVKGENSFENAYKVFD--------------------------------KMSELN 233
Query: 223 DAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIH 282
V+W +I+ +Q G E ++ F+ M +G ++ T +S SAC L N+ K++H
Sbjct: 234 -VVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLH 292
Query: 283 SWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNME 342
SW +++GL+ + V +VD+Y KC S G+++
Sbjct: 293 SWAIRSGLVDD--VECSLVDMYAKC----------------------------SADGSVD 322
Query: 343 EARRHFDSLTEKNVVVWTALFSGYVKAQN--CEALFDLLSEFVTKEGVVTDALILVILLG 400
+ R+ FD + + +V+ WTAL +GY+K N EA+ +L SE +T+ V +
Sbjct: 323 DCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAI-NLFSEMITQGHVEPNHFTFSSAFK 381
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL 460
AC + GK++ + G+ + + ++++ M+ K M A+ F++ E++LV
Sbjct: 382 ACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVS 441
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
YN + + + E+A L E+ E+ + A TF ++LS + GS+ GE+ + +
Sbjct: 442 YNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVV 501
Query: 521 ADYKISPETDHYAC--MIDLYGRANQLEKA 548
K+ + C +I +Y + ++ A
Sbjct: 502 ---KLGLSCNQPVCNALISMYSKCGSIDTA 528
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 110/484 (22%), Positives = 215/484 (44%), Gaps = 89/484 (18%)
Query: 112 IEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYS 171
+++ + D MD T +S L C++ + G+ +HA +++ + +SLI +YS
Sbjct: 49 LDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYS 108
Query: 172 KCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLI 231
K +A VFE ++ F ++ D VSW+ ++
Sbjct: 109 KSGDSAKAEDVFE--------------------------TMRRFGKR----DVVSWSAMM 138
Query: 232 SGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG-L 290
+ Y NG + +K+FV E G+ N++ + + + AC V + +++K G
Sbjct: 139 ACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHF 198
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
S+ V ++D++ K EN + E A + FD
Sbjct: 199 ESDVCVGCSLIDMFVKGEN------------------------------SFENAYKVFDK 228
Query: 351 LTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHP 410
++E NVV WT + + ++ + V G +D L + ACA L
Sbjct: 229 MSELNVVTWTLMITRCMQMGFPREAIRFFLDMVL-SGFESDKFTLSSVFSACAELENLSL 287
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKC---GNMTYAEIIFQNFIERDLVLYNVMIAC 467
GK++H++ +R G+ D + +LVDMY+KC G++ +F + ++ + +I
Sbjct: 288 GKQLHSWAIRSGLVDDVE--CSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITG 345
Query: 468 YAHHGH-EEKAILLFEEMLEKG-IKPDAVTFVAILSAFRHCGSVE--------MGEKYFN 517
Y + + +AI LF EM+ +G ++P+ TF SAF+ CG++ +G+ +
Sbjct: 346 YMKNCNLATEAINLFSEMITQGHVEPNHFTFS---SAFKACGNLSDPRVGKQVLGQAFKR 402
Query: 518 SMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLN-VCRLNRN 576
+ ++ ++ +I ++ +++++E A +S+ +E++ V +FL+ CR N N
Sbjct: 403 GLASNSSVANS------VISMFVKSDRMEDAQRAFESL-SEKNLVSYNTFLDGTCR-NLN 454
Query: 577 AELA 580
E A
Sbjct: 455 FEQA 458
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 108/255 (42%), Gaps = 67/255 (26%)
Query: 15 QAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQ 74
QA K GL + N +I ++ K + + ++++ F+ + E+N+ S+NT + ++ + +Q
Sbjct: 398 QAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQ 457
Query: 75 ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNL 134
A KL E+ + + + FT S L+
Sbjct: 458 --------------------------------AFKLLSEI--TERELGVSAFTFASLLSG 483
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
+ ++ G Q+H+ +VK + ++LI MYSKC + A RVF E N+I
Sbjct: 484 VANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVF-NFMENRNVI- 541
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
SW ++I+G+ ++G A L+ F +M E G
Sbjct: 542 -------------------------------SWTSMITGFAKHGFAIRVLETFNQMIEEG 570
Query: 255 VRWNEHTFASALSAC 269
V+ NE T+ + LSAC
Sbjct: 571 VKPNEVTYVAILSAC 585
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIK 68
H Q +K GL+ N LI +YSK + + ++F+ M RNV SW ++I+ K
Sbjct: 497 HSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAK 552
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 181/627 (28%), Positives = 331/627 (52%), Gaps = 36/627 (5%)
Query: 31 LIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTY 90
L+ ++ + + + +LF ++ +F N++++ K + + A F+ +D+V++
Sbjct: 169 LVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSW 228
Query: 91 NSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAF 150
N M+ ++ G +AL L +EM + +R+D T TS+L C +L ++G+G+QLHA
Sbjct: 229 NMMIAA-LSQSGRVREALGLVVEMHR--KGVRLDSTTYTSSLTACARLFSLGWGKQLHAK 285
Query: 151 MVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEM 210
++++ + S+LI++Y+KC ++EA RVF +
Sbjct: 286 VIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDR--------------------- 324
Query: 211 ALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACC 270
++VSW LI G +Q + ++LF +M + ++ A+ +S C
Sbjct: 325 ------------NSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCF 372
Query: 271 GLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISS 330
++ +++HS LK+G VS+ ++ +Y KC ++ AE + R+ S +S
Sbjct: 373 NRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTS 432
Query: 331 MIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVT 390
MI YS GN+ +AR FD + +N + W A+ Y++ E + S ++++ V
Sbjct: 433 MITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTP 492
Query: 391 DALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIF 450
D + V L CA A G +I + ++ G+ ++ + + + MYSKCG ++ A+ +F
Sbjct: 493 DWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLF 552
Query: 451 QNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVE 510
+D+V +N MI Y+ HG ++A F++ML KG KPD +++VA+LS H G V+
Sbjct: 553 DLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQ 612
Query: 511 MGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNV 570
G+ YF+ MT + ISP +H++CM+DL GRA L +A + + +P + A + G+ L+
Sbjct: 613 EGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSA 672
Query: 571 CRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFA 630
C+++ N ELA A + + L+ + Y+ LA +Y+ G + ++RK MR +
Sbjct: 673 CKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNP 732
Query: 631 GCSWVYVEHEIHIFTVGDVSHPKTNAI 657
G SW+ VE+++H+F DVSHP+ AI
Sbjct: 733 GYSWMEVENKVHVFKADDVSHPQVIAI 759
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 132/531 (24%), Positives = 241/531 (45%), Gaps = 67/531 (12%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFD-EMPERNVFSWNTIIS 64
L A H + + GL N L+H Y L ++R+L ++ E NV + N +++
Sbjct: 36 LAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPNVITHNIMMN 95
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
K L A LFD P +D+ ++N+++ D
Sbjct: 96 GYAKQGSLSDAEELFDRMPRRDVASWNTLMS----------------------------D 127
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
+ C L QL K ++L+DM+ +C + A R+F
Sbjct: 128 TSRPAGSWMSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFS 187
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
E + +N+M+A + ++ A++ F E D VSWN +I+ Q+G E L
Sbjct: 188 Q-IERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAE-RDVVSWNMMIAALSQSGRVREAL 245
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
L V M GVR + T+ S+L+AC L ++ K++H+ V+++ +P+V+S ++++Y
Sbjct: 246 GLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELY 305
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
KC G+ +EA+R F+SL ++N V WT L
Sbjct: 306 AKC-------------------------------GSFKEAKRVFNSLQDRNSVSWTVLIG 334
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
G ++ + +L ++ + E + D L L+ C + L G+++H+ L+ G
Sbjct: 335 GSLQYECFSKSVELFNQ-MRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHN 393
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
+ ++L+ +Y+KCG++ AE +F + ERD+V + MI Y+ G+ KA F+ M
Sbjct: 394 RAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGM 453
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACM 535
+ +A+T+ A+L A+ G+ E G K +++M + ++P+ Y +
Sbjct: 454 ATR----NAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTL 500
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 101/449 (22%), Positives = 190/449 (42%), Gaps = 67/449 (14%)
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
R LH +V ++ F ++L+ Y C +A R+ +E N+I+ N M+ +
Sbjct: 40 RALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPNVITHNIMMNGYAK 99
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFAS 264
+G + A + F R P D SWNTL+S + A
Sbjct: 100 QGSLSDAEELFDRMPR-RDVASWNTLMS-------------------------DTSRPAG 133
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
+ +C L + A ++ K +P V + +VD++ +C +++A +
Sbjct: 134 SWMSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPT 193
Query: 325 SFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVT 384
F +SM+ GY+ ++ A +F+ + E++VV W + + ++ L+ E +
Sbjct: 194 IFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVE-MH 252
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
++GV D+ L ACA +L GK++HA ++R Q+D + S L+++Y+KCG+
Sbjct: 253 RKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFK 312
Query: 445 YAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM-------------------- 484
A+ +F + +R+ V + V+I + K++ LF +M
Sbjct: 313 EAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCF 372
Query: 485 ---------------LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPET 529
L+ G V +++S + CG ++ E F+SM+ +S
Sbjct: 373 NRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVS--- 429
Query: 530 DHYACMIDLYGRANQLEKAIEFMKSIPTE 558
+ MI Y + + KA EF + T
Sbjct: 430 --WTSMITAYSQIGNIIKAREFFDGMATR 456
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 120/241 (49%), Gaps = 7/241 (2%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K+G + +N LI +Y+K L+ + +F M ER++ SW ++I+A + ++
Sbjct: 384 HSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNI 443
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+AR FD ++ +T+N+ML YI G E D LK++ M S + + D T +
Sbjct: 444 IKAREFFDGMATRNAITWNAMLGAYIQ-HGAEEDGLKMYSAMLSQKD-VTPDWVTYVTLF 501
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C + G Q+ VK + ++ I MYSKC EA ++F+ + ++
Sbjct: 502 RGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGK-DV 560
Query: 193 ISKNAMVAACCREGEMEMALKTF---WRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
+S NAM+ + G + A KTF + D +S+ ++SG +G +EG KL+
Sbjct: 561 VSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEG-KLYFD 619
Query: 250 M 250
M
Sbjct: 620 M 620
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 182/631 (28%), Positives = 333/631 (52%), Gaps = 36/631 (5%)
Query: 31 LIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTY 90
L+ ++ + + + +LF ++ +F N++++ K + + A F+ +D+V++
Sbjct: 179 LVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSW 238
Query: 91 NSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAF 150
N M+ ++ G +AL L +EM + +R+D T TS+L C +L ++G+G+QLHA
Sbjct: 239 NMMIAA-LSQSGRVREALGLVVEMHR--KGVRLDSTTYTSSLTACARLFSLGWGKQLHAK 295
Query: 151 MVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEM 210
++++ + S+LI++Y+KC ++EA RVF +
Sbjct: 296 VIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDR--------------------- 334
Query: 211 ALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACC 270
++VSW LI G +Q + ++LF +M + ++ A+ +S C
Sbjct: 335 ------------NSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCF 382
Query: 271 GLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISS 330
++ +++HS LK+G VS+ ++ +Y KC ++ AE + R+ S +S
Sbjct: 383 NRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTS 442
Query: 331 MIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVT 390
MI YS GN+ +AR FD + +N + W A+ Y++ E + S ++++ V
Sbjct: 443 MITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTP 502
Query: 391 DALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIF 450
D + V L CA A G +I + ++ G+ ++ + + + MYSKCG ++ A+ +F
Sbjct: 503 DWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLF 562
Query: 451 QNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVE 510
+D+V +N MI Y+ HG ++A F++ML KG KPD +++VA+LS H G V+
Sbjct: 563 DLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQ 622
Query: 511 MGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNV 570
G+ YF+ MT + ISP +H++CM+DL GRA L +A + + +P + A + G+ L+
Sbjct: 623 EGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSA 682
Query: 571 CRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFA 630
C+++ N ELA A + + L+ + Y+ LA +Y+ G + ++RK MR +
Sbjct: 683 CKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNP 742
Query: 631 GCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
G SW+ VE+++H+F DVSHP+ AI + L
Sbjct: 743 GYSWMEVENKVHVFKADDVSHPQVIAIRNKL 773
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 139/524 (26%), Positives = 254/524 (48%), Gaps = 41/524 (7%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFD-EMPERNVFSWNTIIS 64
L A H + + GL N L+H Y L ++R+L ++ E NV + N +++
Sbjct: 20 LAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKEPNVITHNIMMN 79
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
K L A LFD P +D+ ++N+++ GY A + D L+ F+ M + + + +
Sbjct: 80 GYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRF-LDGLETFVSMHRSGDSLP-N 137
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
FT + C L QL K ++L+DM+ +C + A R+F
Sbjct: 138 AFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFS 197
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
E + +N+M+A + ++ A++ F E D VSWN +I+ Q+G E L
Sbjct: 198 Q-IERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAE-RDVVSWNMMIAALSQSGRVREAL 255
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
L V M GVR + T+ S+L+AC L ++ K++H+ V+++ +P+V+S ++++Y
Sbjct: 256 GLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELY 315
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
KC G+ +EA+R F+SL ++N V WT L
Sbjct: 316 AKC-------------------------------GSFKEAKRVFNSLQDRNSVSWTVLIG 344
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
G ++ + +L ++ + E + D L L+ C + L G+++H+ L+ G
Sbjct: 345 GSLQYECFSKSVELFNQ-MRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHN 403
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
+ ++L+ +Y+KCG++ AE +F + ERD+V + MI Y+ G+ KA F+ M
Sbjct: 404 RAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGM 463
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE 528
+ +A+T+ A+L A+ G+ E G K +++M + ++P+
Sbjct: 464 DTR----NAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPD 503
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 112/450 (24%), Positives = 203/450 (45%), Gaps = 43/450 (9%)
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
R LH +V ++ F ++L+ Y C +A R+ +E N+I+ N M+ +
Sbjct: 24 RALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKEPNVITHNIMMNGYAK 83
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRW-NEHTFA 263
+G + A + F R P D SWNTL+SGY Q +GL+ FV M +G N TF
Sbjct: 84 QGSLSDAEELFDRMPR-RDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFC 142
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
+ +C L + A ++ K +P V + +VD++ +C +++A +
Sbjct: 143 CVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERP 202
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV 383
F +SM+ GY+ ++ A +F+ + E++VV W + + ++ L+ E +
Sbjct: 203 TIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVE-M 261
Query: 384 TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNM 443
++GV D+ L ACA +L GK++HA ++R Q+D + S L+++Y+KCG+
Sbjct: 262 HRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSF 321
Query: 444 TYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM------------------- 484
A+ +F + +R+ V + V+I + K++ LF +M
Sbjct: 322 KEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC 381
Query: 485 ----------------LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE 528
L+ G V +++S + CG ++ E F+SM+ +S
Sbjct: 382 FNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVS-- 439
Query: 529 TDHYACMIDLYGRANQLEKAIEFMKSIPTE 558
+ MI Y + + KA EF + T
Sbjct: 440 ---WTSMITAYSQIGNIIKAREFFDGMDTR 466
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 120/241 (49%), Gaps = 7/241 (2%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K+G + +N LI +Y+K L+ + +F M ER++ SW ++I+A + ++
Sbjct: 394 HSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNI 453
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+AR FD ++ +T+N+ML YI G E D LK++ M S + + D T +
Sbjct: 454 IKAREFFDGMDTRNAITWNAMLGAYIQ-HGAEEDGLKMYSAMLSQKD-VTPDWVTYVTLF 511
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C + G Q+ VK + ++ I MYSKC EA ++F+ + ++
Sbjct: 512 RGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGK-DV 570
Query: 193 ISKNAMVAACCREGEMEMALKTF---WRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
+S NAM+ + G + A KTF + D +S+ ++SG +G +EG KL+
Sbjct: 571 VSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEG-KLYFD 629
Query: 250 M 250
M
Sbjct: 630 M 630
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 194/610 (31%), Positives = 312/610 (51%), Gaps = 42/610 (6%)
Query: 57 FSWNTIISACIKS---HDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIE 113
++ + ++ CI + H L A S+F S + +++N+M+ G+ + AL L++
Sbjct: 10 YALSKLLDFCILTPYFHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSD-PISALNLYVY 68
Query: 114 MQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKC 173
M S + + +T C K G+Q+HA ++K +SLI MY++
Sbjct: 69 MISLG--LSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQN 126
Query: 174 RCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISG 233
E+A +VF+ + +++S AM+ G M+ A K F P + D VSWN +ISG
Sbjct: 127 GIVEDAHKVFDTSSHR-DVVSYTAMITGYASRGNMDKAQKMFDEIP-IKDVVSWNAMISG 184
Query: 234 YVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISN 293
Y + G +E L+LF M + V+ +E T A+ LS C NV+ ++IHSW+ +G SN
Sbjct: 185 YAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSN 244
Query: 294 PFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
+ + ++D+Y KC G ME A F+ L
Sbjct: 245 LKLVNALIDLYSKC-------------------------------GEMERAHGLFEGLQY 273
Query: 354 KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
K+V+ W L GY + + + E + K G + + ++ +L ACA A+ G+
Sbjct: 274 KDVISWNTLIGGYAYINHHKEALLVFQEML-KLGETPNDVTMLSILPACAHLGAIDIGRW 332
Query: 414 IHAYILRM--GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
IH YI + G+ + L ++L+DMY+KCGN+ A +F + + L N MI +A H
Sbjct: 333 IHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMH 392
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH 531
G + A L M + GI+PD +TFV +LSA H G ++G K F SMT DY+I P+ +H
Sbjct: 393 GRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEH 452
Query: 532 YACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLE 591
Y CMIDL GR+ ++A E + S+ E D VI GS L C++++N EL +KL+++E
Sbjct: 453 YGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKLMKIE 512
Query: 592 GNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSH 651
N YV L+N+YA W ++ R+R + + GCS + ++ +H F +GD H
Sbjct: 513 PKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEFLIGDKFH 572
Query: 652 PKTNAIYSVL 661
P+ IY +L
Sbjct: 573 PQNKEIYKML 582
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 132/480 (27%), Positives = 224/480 (46%), Gaps = 85/480 (17%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
+S +E H Q +K GLT+ LI +Y+++ ++ ++ K+FD R+V S+
Sbjct: 90 KSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTA 149
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I+ ++ +A+ +FD P KD+V++N+M+ GY Y+ +AL+LF EM D +
Sbjct: 150 MITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYK-EALELFNEMMKMD--V 206
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFA-----VSSLIDMYSKCRCY 176
+ DE T+ + L+ C NV GRQ+H+++ D GF V++LID+YSKC
Sbjct: 207 KPDESTMATVLSTCTHSGNVELGRQIHSWI-----DNHGFGSNLKLVNALIDLYSKCGEM 261
Query: 177 EEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQ 236
E A +FEG + D +SWNTLI GY
Sbjct: 262 ERAHGLFEGL---------------------------------QYKDVISWNTLIGGYAY 288
Query: 237 NGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLK--NGLISNP 294
+E L +F M + G N+ T S L AC L + + IH ++ K G+I+N
Sbjct: 289 INHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNT 348
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
+ + ++D+Y KC GN+E A + FD++ K
Sbjct: 349 SLQTSLIDMYAKC-------------------------------GNIEAANQVFDTILNK 377
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
++ A+ G+ +A FDLLS + K+G+ D + V LL AC+ G++I
Sbjct: 378 SLSSCNAMIFGFAMHGRADAAFDLLSR-MKKDGIEPDDITFVGLLSACSHAGLSDLGRKI 436
Query: 415 HAYILRMGVQMDKKL--ISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMI-ACYAH 470
+ + +++ KL ++D+ + G AE + + +E D V++ ++ AC H
Sbjct: 437 FKS-MTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIH 495
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 181/627 (28%), Positives = 331/627 (52%), Gaps = 36/627 (5%)
Query: 31 LIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTY 90
L+ ++ + + + +LF ++ +F N++++ K + + A F+ +D+V++
Sbjct: 179 LVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSW 238
Query: 91 NSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAF 150
N M+ ++ G +AL L +EM + +R+D T TS+L C +L ++G+G+QLHA
Sbjct: 239 NMMIAA-LSQSGRVREALGLVVEMHR--KGVRLDSTTYTSSLTACARLFSLGWGKQLHAK 295
Query: 151 MVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEM 210
++++ + S+LI++Y+KC ++EA RVF +
Sbjct: 296 VIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDR--------------------- 334
Query: 211 ALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACC 270
++VSW LI G +Q + ++LF +M + ++ A+ +S C
Sbjct: 335 ------------NSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCF 382
Query: 271 GLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISS 330
++ +++HS LK+G VS+ ++ +Y KC ++ AE + R+ S +S
Sbjct: 383 NRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTS 442
Query: 331 MIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVT 390
MI YS GN+ +AR FD + +N + W A+ Y++ E + S ++++ V
Sbjct: 443 MITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTP 502
Query: 391 DALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIF 450
D + V L CA A G +I + ++ G+ ++ + + + MYSKCG ++ A+ +F
Sbjct: 503 DWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLF 562
Query: 451 QNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVE 510
+D+V +N MI Y+ HG ++A F++ML KG KPD +++VA+LS H G V+
Sbjct: 563 DLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQ 622
Query: 511 MGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNV 570
G+ YF+ MT + ISP +H++CM+DL GRA L +A + + +P + A + G+ L+
Sbjct: 623 EGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSA 682
Query: 571 CRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFA 630
C+++ N ELA A + + L+ + Y+ LA +Y+ G + ++RK MR +
Sbjct: 683 CKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNP 742
Query: 631 GCSWVYVEHEIHIFTVGDVSHPKTNAI 657
G SW+ VE+++H+F DVSHP+ AI
Sbjct: 743 GYSWMEVENKVHVFKADDVSHPQVIAI 769
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 140/531 (26%), Positives = 256/531 (48%), Gaps = 41/531 (7%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFD-EMPERNVFSWNTIIS 64
L A H + + GL N L+H Y L ++R+L ++ E NV + N +++
Sbjct: 20 LAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPNVITHNIMMN 79
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
K L A LFD P +D+ ++N+++ GY A + D L+ F+ M + + + +
Sbjct: 80 GYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRF-LDGLETFVSMHRSGDSLP-N 137
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
FT + C L QL K ++L+DM+ +C + A R+F
Sbjct: 138 AFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFS 197
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
E + +N+M+A + ++ A++ F E D VSWN +I+ Q+G E L
Sbjct: 198 Q-IERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAE-RDVVSWNMMIAALSQSGRVREAL 255
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
L V M GVR + T+ S+L+AC L ++ K++H+ V+++ +P+V+S ++++Y
Sbjct: 256 GLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELY 315
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
KC G+ +EA+R F+SL ++N V WT L
Sbjct: 316 AKC-------------------------------GSFKEAKRVFNSLQDRNSVSWTVLIG 344
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
G ++ + +L ++ + E + D L L+ C + L G+++H+ L+ G
Sbjct: 345 GSLQYECFSKSVELFNQ-MRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHN 403
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
+ ++L+ +Y+KCG++ AE +F + ERD+V + MI Y+ G+ KA F+ M
Sbjct: 404 RAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGM 463
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACM 535
+ +A+T+ A+L A+ G+ E G K +++M + ++P+ Y +
Sbjct: 464 ATR----NAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTL 510
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 112/450 (24%), Positives = 203/450 (45%), Gaps = 43/450 (9%)
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
R LH +V ++ F ++L+ Y C +A R+ +E N+I+ N M+ +
Sbjct: 24 RALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPNVITHNIMMNGYAK 83
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRW-NEHTFA 263
+G + A + F R P D SWNTL+SGY Q +GL+ FV M +G N TF
Sbjct: 84 QGSLSDAEELFDRMPR-RDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFC 142
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
+ +C L + A ++ K +P V + +VD++ +C +++A +
Sbjct: 143 CVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERP 202
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV 383
F +SM+ GY+ ++ A +F+ + E++VV W + + ++ L+ E +
Sbjct: 203 TIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVE-M 261
Query: 384 TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNM 443
++GV D+ L ACA +L GK++HA ++R Q+D + S L+++Y+KCG+
Sbjct: 262 HRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSF 321
Query: 444 TYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM------------------- 484
A+ +F + +R+ V + V+I + K++ LF +M
Sbjct: 322 KEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC 381
Query: 485 ----------------LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE 528
L+ G V +++S + CG ++ E F+SM+ +S
Sbjct: 382 FNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVS-- 439
Query: 529 TDHYACMIDLYGRANQLEKAIEFMKSIPTE 558
+ MI Y + + KA EF + T
Sbjct: 440 ---WTSMITAYSQIGNIIKAREFFDGMATR 466
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 120/241 (49%), Gaps = 7/241 (2%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K+G + +N LI +Y+K L+ + +F M ER++ SW ++I+A + ++
Sbjct: 394 HSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNI 453
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+AR FD ++ +T+N+ML YI G E D LK++ M S + + D T +
Sbjct: 454 IKAREFFDGMATRNAITWNAMLGAYIQ-HGAEEDGLKMYSAMLSQKD-VTPDWVTYVTLF 511
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C + G Q+ VK + ++ I MYSKC EA ++F+ + ++
Sbjct: 512 RGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGK-DV 570
Query: 193 ISKNAMVAACCREGEMEMALKTF---WRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
+S NAM+ + G + A KTF + D +S+ ++SG +G +EG KL+
Sbjct: 571 VSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEG-KLYFD 629
Query: 250 M 250
M
Sbjct: 630 M 630
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 210/680 (30%), Positives = 351/680 (51%), Gaps = 15/680 (2%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
+R +L+ A H I G N+LI +Y K + L +R+LFDE+ E + +
Sbjct: 25 LRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIART 84
Query: 61 TIISACIKSHDLKQARSLFDSSP--HKDLVTYNSMLCGYI-NAEGYEADALKLFIEMQSA 117
T++S S D+ AR +F+ +P +D V YN+M+ G+ N +GY A + LF +M+
Sbjct: 85 TMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSA--INLFCKMKH- 141
Query: 118 DEHIRMDEFTVTSTL-NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKC--- 173
E + D FT S L L + + Q HA +K+ ++L+ +YSKC
Sbjct: 142 -EGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASS 200
Query: 174 -RCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
A +VF+ E+ + S M+ + G ++ + + V++N +IS
Sbjct: 201 PSLLHSARKVFDEILEK-DERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMIS 259
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
GYV G +E L++ RM +G+ +E T+ S + AC ++ K++H++VL+ S
Sbjct: 260 GYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFS 319
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
F +S +V +Y KC + A ++ ++ S ++++ GY G++ EA+ F +
Sbjct: 320 FHFDNS-LVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMK 378
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
EKN++ W + SG + E L S + +EG + +CA+ A G+
Sbjct: 379 EKNILSWMIMISGLAENGFGEEGLKLFS-CMKREGFEPCDYAFSGAIKSCAVLGAYCNGQ 437
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
+ HA +L++G + L+ MY+KCG + A +F+ D V +N +IA HG
Sbjct: 438 QYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHG 497
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
H +A+ ++EEML+KGI+PD +T + +L+A H G V+ G KYF+SM Y+I P DHY
Sbjct: 498 HGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHY 557
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
A +IDL R+ + A ++S+P + A I + L+ CR++ N EL A +KL L
Sbjct: 558 ARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIP 617
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
+ Y+ L+N++AA G W E+ R+RK MR + CSW+ +E ++H F V D SHP
Sbjct: 618 EHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHP 677
Query: 653 KTNAIYSVLAIFTGELYEIA 672
+ A+Y L E+ +
Sbjct: 678 EAEAVYIYLQDLGKEMRRLG 697
>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
Length = 853
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 197/658 (29%), Positives = 324/658 (49%), Gaps = 99/658 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A+K GL N L+ +Y+K L ++ +LF+ MP+ ++ +WN +IS C+++
Sbjct: 265 HSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQN--- 321
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
G +A LF +MQ + R D T+ S L
Sbjct: 322 -----------------------------GLFVEAFGLFYDMQRSGA--RPDSITLVSLL 350
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
L + G+++H ++V+ + F VS+L+D+Y KCR
Sbjct: 351 PALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCR------------------ 392
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
++ MA + + D V +T+ISGYV NG +EE L++F + E
Sbjct: 393 --------------DVRMA-QNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLE 437
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
++ N T AS L C + + ++IH +VL+N +V S ++D+Y KC ++
Sbjct: 438 QCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDL 497
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
+ + L ++ + +SMI +S G +EA
Sbjct: 498 SHYIFLKMSQKDEVTWNSMISSFSQNGKPQEA---------------------------- 529
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
DL + EG+ + + + L ACA A++ GKEIH ++ ++ D S
Sbjct: 530 ---LDLFRQMCM-EGIKYNNITISAALSACASLPAIYYGKEIHGVTIKGPIKADIFAESA 585
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
L+DMY+KCGN+ A +F+ +++ V +N +I+ Y HG ++++ L M E+G KPD
Sbjct: 586 LIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPD 645
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
VTF+A++SA H G VE G + F MT Y I+P +H+ACM+DLY R+ +L+KAI+F+
Sbjct: 646 HVTFLALISACAHAGLVEEGVQLFQCMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFI 705
Query: 553 KSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWA 612
+P + DA I G+ L+ CR++RN ELA A ++L +L+ N YV ++N+ A G W
Sbjct: 706 ADMPFKPDAGIWGALLHACRVHRNVELADIASQELFKLDPANSGYYVLMSNINAVAGRWD 765
Query: 613 EMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYE 670
+ ++R+ M+ K + G SWV V + H+F D SHP++ IY+ L EL E
Sbjct: 766 GVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFVASDKSHPESEDIYTSLKTLLQELRE 823
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 139/489 (28%), Positives = 229/489 (46%), Gaps = 69/489 (14%)
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
L AR FD P +D V +N M+ G I A + A++LF M+++ + T+
Sbjct: 192 LGNARDAFDGIPERDCVLWNVMMDGCIKAGDVDG-AVRLFRNMRASG--CEPNFATLACF 248
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L++C ++ G QLH+ VK + ++L+ MY+KC+C ++A R+FE ++
Sbjct: 249 LSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQD-- 306
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
D V+WN +ISG VQNG E LF M
Sbjct: 307 -------------------------------DLVTWNGMISGCVQNGLFVEAFGLFYDMQ 335
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
+G R + T S L A L +K KE+H ++++N + + F+ S +VD+Y KC ++
Sbjct: 336 RSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVR 395
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
A+++ + S+MI GY L G EEA + F L E+ +
Sbjct: 396 MAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCI--------------- 440
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
K VT A +L CA AAL G++IH Y+LR + + S
Sbjct: 441 -------------KPNAVTIASVL----PGCASMAALPLGQQIHGYVLRNAYERKCYVES 483
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
L+DMY+KCG + + IF ++D V +N MI+ ++ +G ++A+ LF +M +GIK
Sbjct: 484 ALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKY 543
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
+ +T A LSA ++ G K + +T I + + +ID+Y + LE A+
Sbjct: 544 NNITISAALSACASLPAIYYG-KEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALRV 602
Query: 552 MKSIPTEED 560
+ +P + +
Sbjct: 603 FEFMPDKNE 611
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 161/390 (41%), Gaps = 67/390 (17%)
Query: 130 STLNLCVKLLNVGFGRQLHAFMVKTS--NDASGFAV-SSLIDMYSKCRCYEEACRVFEGC 186
+ L CV ++ G Q+HA V + +D + A+ + L+ MY R + +A VF
Sbjct: 37 AVLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAVFSAL 96
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
S + WN LI G+ G +
Sbjct: 97 PRAAAASS------------------------------LPWNWLIRGFTAAGQHHLAVLF 126
Query: 247 FVRMGEN--GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
+V+M + + HT + +C L + + +H GL ++ +V S +V +
Sbjct: 127 YVKMWSHPAAPSPDAHTLPYVVKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKM- 185
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
YA++ LL GN AR FD + E++ V+W +
Sbjct: 186 -------YADAGLL--------------------GN---ARDAFDGIPERDCVLWNVMMD 215
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
G +KA + + L + G + L L CA A L G ++H+ ++ G++
Sbjct: 216 GCIKAGDVDGAVRLFRN-MRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLE 274
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
+ + +TL+ MY+KC + A +F+ + DLV +N MI+ +G +A LF +M
Sbjct: 275 PEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDM 334
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
G +PD++T V++L A ++ G++
Sbjct: 335 QRSGARPDSITLVSLLPALTDLNGLKQGKE 364
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 139/336 (41%), Gaps = 24/336 (7%)
Query: 248 VRMGENGVRWNEHTFASA-LSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
+R+ +G++ F S SA + +V A + + VL+ G +S P + G+
Sbjct: 1 MRLARSGLKLPPRPFCSTTFSATAAVTDVSSADRLLA-VLR-GCVSAPHLPLGL------ 52
Query: 307 CENMNYAESMLLLKGV---RNSFSISSMIVG-YSLQGNMEEARRHFDSLTEK---NVVVW 359
+ ++ G N ++ + ++G Y L +A F +L + + W
Sbjct: 53 -----QIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAVFSALPRAAAASSLPW 107
Query: 360 TALFSGYVKA-QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
L G+ A Q+ A+ + + DA L ++ +CA A+ G+ +H
Sbjct: 108 NWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAALGAMSLGRLVHRTA 167
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
+G+ D + S LV MY+ G + A F ERD VL+NVM+ G + A+
Sbjct: 168 RAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAV 227
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
LF M G +P+ T LS + G + +S+ + PE ++ +
Sbjct: 228 RLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQ-LHSLAVKCGLEPEVAVANTLLAM 286
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLN 574
Y + L+ A + +P ++D V ++ C N
Sbjct: 287 YAKCQCLDDAWRLFELMP-QDDLVTWNGMISGCVQN 321
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 200/610 (32%), Positives = 313/610 (51%), Gaps = 42/610 (6%)
Query: 57 FSWNTIISAC-IKSH-DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
F+ + +I C + H DL A SLF + + + V +N M+ G ++E AL+ ++ M
Sbjct: 61 FALSKLIEFCAVSPHGDLSYALSLFKTIRNPNHVIWNHMIRGLSSSES-PFLALEYYVHM 119
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
S+ +E+T S C K+ G+Q+HA ++K + + F +SLI+MY++
Sbjct: 120 ISSG--TEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNG 177
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
A VF+ + + +S A++ +G ++ A + F P + D VSWN +ISGY
Sbjct: 178 ELVNARLVFDKSSMR-DAVSFTALITGYASKGFLDEARELFDEIP-VRDVVSWNAMISGY 235
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACC-GLRNVKCAKEIHSWVLKNGLISN 293
Q+G EE + F M V N T S LSAC +++ + SW+ GL SN
Sbjct: 236 AQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSN 295
Query: 294 PFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
+ +G++D+Y KC G++EEA F+ + +
Sbjct: 296 IRLVNGLIDMYVKC-------------------------------GDLEEASNLFEKIQD 324
Query: 354 KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
KNVV W + GY + L + D L IL ACA AL GK
Sbjct: 325 KNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSIL-PACANLGALDLGKW 383
Query: 414 IHAYILRMGVQMDKK--LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
+HAY+ + M L ++L+DMY+KCG++ A+ IF + L +N MI+ +A H
Sbjct: 384 VHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMH 443
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH 531
GH + A+ LF M +G PD +TFV +L+A +H G + +G +YF+SM DYK+SP+ H
Sbjct: 444 GHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPH 503
Query: 532 YACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLE 591
Y CMIDL+GRA ++A +K++ + D I S L CR++R ELA + L LE
Sbjct: 504 YGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELE 563
Query: 592 GNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSH 651
N + YV L+N+YA G W ++ +IR ++ + + GCS + V+ +H F VGD H
Sbjct: 564 PENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVH 623
Query: 652 PKTNAIYSVL 661
P++N IY +L
Sbjct: 624 PQSNEIYKML 633
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 148/618 (23%), Positives = 262/618 (42%), Gaps = 123/618 (19%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K GL LI++Y+++ L +R +FD+ R+ S+ +I+ L
Sbjct: 151 HAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFL 210
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+AR LFD P +D+V++N+M+ GY + G +A+ F EM+ A + + T+ S L
Sbjct: 211 DEARELFDEIPVRDVVSWNAMISGYAQS-GRVEEAMAFFEEMRRAK--VTPNVSTMLSVL 267
Query: 133 NLCVKL-LNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
+ C + ++ G + +++ ++ V+ LIDMY KC EEA +FE ++
Sbjct: 268 SACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDK-- 325
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
+ VSWN +I GY +E L LF RM
Sbjct: 326 -------------------------------NVVSWNVMIGGYTHMSCYKEALGLFRRMM 354
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
++ + N+ TF S L AC L + K +H++V KN
Sbjct: 355 QSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKN----------------------- 391
Query: 312 YAESMLLLKGVRNSFSI-SSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
+K ++N+ ++ +S+I Y+ G++ A+R FD + K++ W A+ SG+
Sbjct: 392 -------MKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHG 444
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
+ + L S +T EG V D + V +L AC HA +L +G ++
Sbjct: 445 HTDTALGLFSR-MTSEGFVPDDITFVGVLTACK-----------HAGLLSLG----RRYF 488
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
S+++ Y + L Y MI + G ++A L + M +K
Sbjct: 489 SSMIQDYK---------------VSPKLPHYGCMIDLFGRAGLFDEAETLVKNM---EMK 530
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH-YACMIDLYGRANQLEKAI 549
PD + ++L A R +E+ E + +++ PE Y + ++Y A + E
Sbjct: 531 PDGAIWCSLLGACRIHRRIELAESVAKHL---FELEPENPSAYVLLSNIYAGAGRWEDVA 587
Query: 550 EF--------MKSIP----TEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKAR 597
+ MK +P E D+V+ + ++ E+ +E +RLE KA
Sbjct: 588 KIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSNEIYKMLDEIDMRLE---KAG 644
Query: 598 YVQLAN--VYAAEGNWAE 613
+V + +Y + W E
Sbjct: 645 FVPDTSEVLYDMDEEWKE 662
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 138/331 (41%), Gaps = 68/331 (20%)
Query: 258 NEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESML 317
++H + LS C + ++ K+IHS ++K GL + F S +++ +C
Sbjct: 27 HDHPSLTLLSNC---KTLQTLKQIHSQIIKTGLHNTHFALSKLIE-FC------------ 70
Query: 318 LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFD 377
S G++ A F ++ N V+W + G + E+ F
Sbjct: 71 ----------------AVSPHGDLSYALSLFKTIRNPNHVIWNHMIRGL---SSSESPFL 111
Query: 378 LLSEFV--TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVD 435
L +V G + + +C H GK++HA++L++G++ + + ++L++
Sbjct: 112 ALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLIN 171
Query: 436 MYSKCGNMTYAEIIF--------------------QNFIE-----------RDLVLYNVM 464
MY++ G + A ++F + F++ RD+V +N M
Sbjct: 172 MYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAM 231
Query: 465 IACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYK 524
I+ YA G E+A+ FEEM + P+ T +++LSA GS + S D
Sbjct: 232 ISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRG 291
Query: 525 ISPETDHYACMIDLYGRANQLEKAIEFMKSI 555
+ +ID+Y + LE+A + I
Sbjct: 292 LGSNIRLVNGLIDMYVKCGDLEEASNLFEKI 322
>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 721
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 204/643 (31%), Positives = 318/643 (49%), Gaps = 70/643 (10%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K+ + +T +N +++YSK L +R F E NVFS+N I+ A K +
Sbjct: 31 HALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKI 90
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
AR LFD P D V+YN+++ GY +A A A+ LF M+ +D FT++ +
Sbjct: 91 HIARQLFDEIPQPDTVSYNTLISGYADARETFA-AMVLFKRMRKLG--FEVDGFTLSGLI 147
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C V +QLH F +VS D YS VN
Sbjct: 148 AACCD--RVDLIKQLHCF-----------SVSGGFDSYS-----------------SVN- 176
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
NA V + G + A+ F+ EL D VSWN++I Y Q+ + + L L+ M
Sbjct: 177 ---NAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIF 233
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G + + T AS L+A L ++ ++ H ++K G N V SG++D Y KC +
Sbjct: 234 KGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCD- 292
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
M ++ + F + ++VVW + SGY + N
Sbjct: 293 ---------------------------GMYDSEKVFQEILSPDLVVWNTMISGY--SMNE 323
Query: 373 EALFDLLSEF--VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
E + + F + + G D V + AC+ ++ K+IH ++ + ++ +
Sbjct: 324 ELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISV 383
Query: 431 S-TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+ L+ +Y K GN+ A +F E + V +N MI YA HGH +A+LL++ ML+ GI
Sbjct: 384 NNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGI 443
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
P+ +TFVA+LSA HCG V+ G++YFN+M +KI PE +HY+CMIDL GRA +LE+A
Sbjct: 444 APNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAE 503
Query: 550 EFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEG 609
F+ ++P + +V + L CR ++N LA A +L+ ++ YV LAN+YA
Sbjct: 504 RFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADAR 563
Query: 610 NWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
W EM +RK MRG + + GCSW+ V+ + H+F D SHP
Sbjct: 564 KWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHP 606
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 184/418 (44%), Gaps = 41/418 (9%)
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
G+ LHA VK+ +S + + +++YSKC A F TEE N+ S N +V A
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYS-TEEPNVFSYNVIVKAYA 85
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
++ ++ +A + F P+ D VS+NTLISGY + + LF RM + G + T +
Sbjct: 86 KDSKIHIARQLFDEIPQ-PDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLS 144
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
++ACC V K++H F SG D Y V
Sbjct: 145 GLIAACCD--RVDLIKQLHC-----------FSVSGGFDSY---------------SSVN 176
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTE-KNVVVWTALFSGYVKAQNCEALFDLLSEF 382
N+F + YS G + EA F + E ++ V W ++ Y + + L E
Sbjct: 177 NAF-----VTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEM 231
Query: 383 VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCG- 441
+ K G D L +L A L G++ H +++ G + + S L+D YSKCG
Sbjct: 232 IFK-GFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGG 290
Query: 442 --NMTYAEIIFQNFIERDLVLYNVMIACYAHHGH-EEKAILLFEEMLEKGIKPDAVTFVA 498
M +E +FQ + DLV++N MI+ Y+ + E+A+ F +M G +PD +FV
Sbjct: 291 CDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVC 350
Query: 499 ILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIP 556
+ SA + S ++ + S +I LY ++ L+ A +P
Sbjct: 351 VTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP 408
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 118/252 (46%), Gaps = 4/252 (1%)
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
N W TF L R++ K +H+ +K+ + S+ ++S+ V++Y KC ++Y
Sbjct: 2 NQTPWKFKTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSY 61
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
A + N FS + ++ Y+ + AR+ FD + + + V + L SGY A+
Sbjct: 62 ARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARET 121
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
A L + K G D L L+ AC + L K++H + + G + +
Sbjct: 122 FAAMVLFKR-MRKLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNA 178
Query: 433 LVDMYSKCGNMTYAEIIFQNFIE-RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
V YSK G + A +F E RD V +N MI Y H KA+ L++EM+ KG K
Sbjct: 179 FVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKI 238
Query: 492 DAVTFVAILSAF 503
D T ++L+A
Sbjct: 239 DMFTLASVLNAL 250
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 199/602 (33%), Positives = 303/602 (50%), Gaps = 68/602 (11%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N +++ K L A LF++ P ++VT+N M+ G++ G+ +A LF EM SA
Sbjct: 112 NALVAMYSKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQ-NGFMDEASLLFSEMISAG- 169
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
+ D T S L + ++ G+++H ++++ F S+LID+Y KCR A
Sbjct: 170 -VSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMA 228
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
C++F+ T N + C +ISGYV NG
Sbjct: 229 CKIFKQST--------NVDIVVC-------------------------TAIISGYVLNGL 255
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
+ L++F + E + N T AS L AC GL + KE+H+ +LK+GL V S
Sbjct: 256 NNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGSA 315
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
I+D+Y KC G ++ A + F + EK+ V W
Sbjct: 316 IMDMYAKC-------------------------------GRLDLAYQIFRRMPEKDAVCW 344
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
A+ + + + DL + + +EG+ D + + L ACA ALH GK IH++++
Sbjct: 345 NAIITNCSQNGKPQEAIDLFRQ-MGREGLSYDCVSISAALSACANLPALHHGKAIHSFMI 403
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
+ + S L+DMY KCGN++ A +F E++ V +N +IA Y HGH E ++
Sbjct: 404 KGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLA 463
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
LF +MLE GI+PD VTF+ ILSA H G V+ G +YF MT +Y I +HYAC++DL+
Sbjct: 464 LFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLF 523
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYV 599
GRA +L +A E +K++P D + G+ L CR++ N ELA A LL L+ N YV
Sbjct: 524 GRAGRLNEAFETIKNMPFSPDDGVWGTLLGACRVHGNVELAEVASRCLLDLDPENSGCYV 583
Query: 600 QLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYS 659
L+NV+A G W + +IR M+ + G SW+ V H+F D SHP++ IYS
Sbjct: 584 LLSNVHADAGQWGSVRKIRSLMKKRGVQKVPGYSWIEVNKTTHMFVAADGSHPESAQIYS 643
Query: 660 VL 661
VL
Sbjct: 644 VL 645
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/420 (25%), Positives = 190/420 (45%), Gaps = 67/420 (15%)
Query: 161 FAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPE 220
F SSLI +Y++ C E+A R+F+ + P
Sbjct: 8 FVGSSLIKLYAENGCIEDARRLFD--------------------------------KMPN 35
Query: 221 LNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKE 280
D V WN +++G+V+ G+ +K+F M + N TFAS LS C + +
Sbjct: 36 -KDCVLWNVMLNGFVKCGEPNSAVKVFEDMRNCQTKPNSITFASVLSICASEALSEFGNQ 94
Query: 281 IHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGN 340
+H V+ G +P V++ +V +Y K G
Sbjct: 95 LHGLVISCGFHFDPLVANALVAMYSKF-------------------------------GQ 123
Query: 341 MEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLG 400
+ +A + F+++ + NVV W + +G+V+ + L SE ++ GV D++ L
Sbjct: 124 LSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISA-GVSPDSITFASFLP 182
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL 460
+ A+L GKEIH YILR G+ +D L S L+D+Y KC ++ A IF+ D+V+
Sbjct: 183 SVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVV 242
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
+I+ Y +G A+ +F +LE+ + P+AVT ++L A ++ +G K ++
Sbjct: 243 CTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLG-KELHANI 301
Query: 521 ADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELA 580
+ + + ++D+Y + +L+ A + + +P E+DAV + + C N + A
Sbjct: 302 LKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMP-EKDAVCWNAIITNCSQNGKPQEA 360
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 121/528 (22%), Positives = 205/528 (38%), Gaps = 135/528 (25%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H I G + N L+ +YSK L ++ KLF+ MP+ NV +WN +I+ +++ +
Sbjct: 96 HGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFM 155
Query: 73 KQARSLF----DSSPHKDLVTYNSMLC---------------GYINAEGYEAD------- 106
+A LF + D +T+ S L GYI G D
Sbjct: 156 DEASLLFSEMISAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDVFLKSAL 215
Query: 107 ------------ALKLFIEMQSAD-----------------------------EHIRMDE 125
A K+F + + D E + +
Sbjct: 216 IDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNA 275
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
T+ S L C L + G++LHA ++K D S+++DMY+KC
Sbjct: 276 VTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKC------------ 323
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
G +++A + F R PE DAV WN +I+ QNG +E +
Sbjct: 324 --------------------GRLDLAYQIFRRMPE-KDAVCWNAIITNCSQNGKPQEAID 362
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
LF +MG G+ ++ + ++ALSAC L + K IHS+++K S F S ++D+Y
Sbjct: 363 LFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYG 422
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
KC N++ A + + +N S +S+I Y G++E + F + E
Sbjct: 423 KCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLE------------ 470
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE-IHAYILRMGVQ 424
+G+ D + + +L AC + G + G+
Sbjct: 471 --------------------DGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIP 510
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQN--FIERDLVLYNVMIACYAH 470
+ + +VD++ + G + A +N F D V ++ AC H
Sbjct: 511 ARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGACRVH 558
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 130/254 (51%), Gaps = 9/254 (3%)
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK---AQNCEALFDLLS 380
+ F SS+I Y+ G +E+ARR FD + K+ V+W + +G+VK + +F+ +
Sbjct: 6 DEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMR 65
Query: 381 EFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC 440
TK +T A +L I CA +A G ++H ++ G D + + LV MYSK
Sbjct: 66 NCQTKPNSITFASVLSI----CASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKF 121
Query: 441 GNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAIL 500
G ++ A +F + ++V +N MIA + +G ++A LLF EM+ G+ PD++TF + L
Sbjct: 122 GQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFL 181
Query: 501 SAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEED 560
+ S++ G K + + I+ + + +ID+Y + + A + K T D
Sbjct: 182 PSVTESASLKQG-KEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQ-STNVD 239
Query: 561 AVILGSFLNVCRLN 574
V+ + ++ LN
Sbjct: 240 IVVCTAIISGYVLN 253
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 69/137 (50%), Gaps = 3/137 (2%)
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
MG +D+ + S+L+ +Y++ G + A +F +D VL+NVM+ + G A+ +
Sbjct: 1 MGFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKV 60
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFN-SMTADYKISPETDHYACMIDLY 539
FE+M KP+++TF ++LS E G + ++ + P + ++ +Y
Sbjct: 61 FEDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVAN--ALVAMY 118
Query: 540 GRANQLEKAIEFMKSIP 556
+ QL A++ ++P
Sbjct: 119 SKFGQLSDALKLFNTMP 135
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 188/599 (31%), Positives = 314/599 (52%), Gaps = 66/599 (11%)
Query: 75 ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNL 134
A +FD P ++LVT+ M+ + G DA+ LF++M+ + D FT +S L+
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQL-GCARDAIDLFLDMELSG--YVPDRFTYSSVLSA 65
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
C +L + G+QLH+ +++ SL+DMY+KC
Sbjct: 66 CTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAA------------------- 106
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE-EGLKLFVRMGEN 253
+G ++ + K F + PE N +SW +I+ Y Q+G+ + E ++LF +M
Sbjct: 107 ----------DGSVDDSRKVFEQMPEHN-VMSWTAIITAYAQSGECDKEAIELFCKMISG 155
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA 313
+R N +F+S L AC L + ++++S+ +K G+ S V + ++ +Y +
Sbjct: 156 HIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYAR------- 208
Query: 314 ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE 373
G ME+AR+ FD L EKN+V + A+ GY K E
Sbjct: 209 ------------------------SGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSE 244
Query: 374 ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL 433
F L +E + G+ A LL A A+ G++IH +L+ G + ++ + + L
Sbjct: 245 EAFLLFNE-IADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNAL 303
Query: 434 VDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDA 493
+ MYS+CGN+ A +F +R+++ + MI +A HG +A+ +F +MLE G KP+
Sbjct: 304 ISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNE 363
Query: 494 VTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMK 553
+T+VA+LSA H G + G+K+FNSM ++ I P +HYACM+DL GR+ L +A+EF+
Sbjct: 364 ITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFIN 423
Query: 554 SIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAE 613
S+P DA++ + L CR++ N EL A E +L E ++ A Y+ L+N++A+ G W +
Sbjct: 424 SMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKD 483
Query: 614 MGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
+ +IRK M+ + AGCSW+ VE+ +H F VG+ SHP+ IY L ++ E+
Sbjct: 484 VVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMG 542
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/483 (22%), Positives = 194/483 (40%), Gaps = 100/483 (20%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + I+ GL L L+ +Y+K C +
Sbjct: 79 HSRVIRLGLALDVCVGCSLVDMYAK----------------------------CAADGSV 110
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+R +F+ P +++++ +++ Y + + +A++LF +M S HIR + F+ +S L
Sbjct: 111 DDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISG--HIRPNHFSFSSVL 168
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C L + G Q++++ VK + +SLI MY++ E+A + F+ L
Sbjct: 169 KACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFD------IL 222
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
KN VS+N ++ GY +N +EE LF + +
Sbjct: 223 FEKN---------------------------LVSYNAIVDGYAKNLKSEEAFLLFNEIAD 255
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G+ + TFAS LS + + ++IH +LK G SN + + ++ +Y +C N+
Sbjct: 256 TGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEA 315
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL----TEKNVVVWTALFS---- 364
A + RN S +SMI G++ G A F + T+ N + + A+ S
Sbjct: 316 AFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSH 375
Query: 365 ------------------GYV-KAQNCEALFDLLS---------EFVTKEGVVTDALILV 396
G V + ++ + DLL EF+ ++ DAL+
Sbjct: 376 VGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWR 435
Query: 397 ILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER 456
LLGAC + G+ IL D L ++++ G I ++ ER
Sbjct: 436 TLLGACRVHGNTELGRHAAEMILEQEPD-DPAAYILLSNLHASAGQWKDVVKIRKSMKER 494
Query: 457 DLV 459
+L+
Sbjct: 495 NLI 497
>gi|225462731|ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|302143682|emb|CBI22543.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 207/715 (28%), Positives = 349/715 (48%), Gaps = 110/715 (15%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
I+TN I Y+K + L +R+LFD+MP+R V SWNT+IS+ K
Sbjct: 33 ISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSK----------------- 75
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR 145
G ++AL L M + H+++ E T +S L++C +L + G+
Sbjct: 76 ---------------HGRFSEALFLVYSMHRS--HMKLSESTFSSVLSVCARLRCLRDGK 118
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
+H ++K+ +++ S+L+ Y+ C EA RVF+ N + + M+
Sbjct: 119 LIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRVFDVLVRR-NEVLWSLMLVGYVTC 177
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD----AEEGLKLFVRMGENGVRWNEHT 261
M+ AL F + P D V+W TLISG+ +NGD A E +L +R GE NE T
Sbjct: 178 NVMDDALSVFVKMPR-RDVVAWTTLISGFSKNGDGCGKALEIFRLMMRSGETTP--NEFT 234
Query: 262 FASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA-------- 313
F + AC L + + +H ++K GL +P + +V+ YC+CE ++ A
Sbjct: 235 FDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVV 294
Query: 314 ---------------------ESMLLLKGVR--NSFSISSMIVGYSLQGNMEEARRHFDS 350
++ L+ G+ N S + MI GY++ G M++++R F+
Sbjct: 295 NPCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVGGQMDDSKRLFEK 354
Query: 351 LT--------------------------------EKNVVVWTALFSGYVKAQNCEALFDL 378
+ EK+ V W ++ SGY+ + E L
Sbjct: 355 MPCRTIFSSNTMISVYSRNGEIDKALELFEETKNEKDPVTWNSMISGYIHSGQPEEALKL 414
Query: 379 LSEFVT--KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDM 436
++T + + L AC+ +LH G+ +HA++++ + + + ++L+DM
Sbjct: 415 ---YITMHRLSIQQTQSTFSALFHACSCLGSLHQGQLLHAHLIKTPFESNVYVGTSLIDM 471
Query: 437 YSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTF 496
YSKCG++ A+ F + ++ + +I +A+HG +AI LF+ M+E+G+ P+ TF
Sbjct: 472 YSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDRMIEQGLAPNGATF 531
Query: 497 VAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIP 556
V +LSA G V G K F+SM Y ++P +HYAC++DL GR+ + +A EF+K +P
Sbjct: 532 VGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHIREAEEFIKKMP 591
Query: 557 TEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGR 616
E D V+ G+ L+ C + E+ EK+ + + YV L+N+YA G W E
Sbjct: 592 LEADGVVWGALLSACWFWMDLEVGERVAEKMFSFDPKPISSYVILSNIYAGLGRWREKMM 651
Query: 617 IRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEI 671
+RK +RG K + GCSW+ + ++IH+F++ D SHP N IY+ L T + +
Sbjct: 652 VRKILRGFKVKKDPGCSWIELNNKIHVFSIEDRSHPYCNMIYATLEHLTANINSV 706
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/530 (22%), Positives = 226/530 (42%), Gaps = 103/530 (19%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L++ + H +K+G + + L++ Y+ + E+R++FD + RN W+ ++
Sbjct: 114 LRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRVFDVLVRRNEVLWSLMLVG 173
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
+ + + A S+F P +D+V + +++ G+ AL++F M + E +E
Sbjct: 174 YVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDGCGKALEIFRLMMRSGE-TTPNE 232
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
FT + C +L + GR +H ++K + +L++ Y +C ++A RV +G
Sbjct: 233 FTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKG 292
Query: 186 CTE------------------------------EVNLISKN------------------- 196
E+N +S N
Sbjct: 293 VVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVGGQMDDSKRLF 352
Query: 197 ------------AMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
M++ R GE++ AL+ F D V+WN++ISGY+ +G EE L
Sbjct: 353 EKMPCRTIFSSNTMISVYSRNGEIDKALELFEETKNEKDPVTWNSMISGYIHSGQPEEAL 412
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
KL++ M ++ + TF++ AC L ++ + +H+ ++K SN +V + ++D+Y
Sbjct: 413 KLYITMHRLSIQQTQSTFSALFHACSCLGSLHQGQLLHAHLIKTPFESNVYVGTSLIDMY 472
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
KC G++ EA+ F S+ NV WTAL +
Sbjct: 473 SKC-------------------------------GSIMEAQTSFVSIFSPNVAAWTALIN 501
Query: 365 GYVK---AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR- 420
G+ +LFD + E +G+ + V +L AC+ ++ G +I + R
Sbjct: 502 GHAYHGLGSEAISLFDRMIE----QGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERC 557
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMI-ACY 468
V + + +VD+ + G++ A E I + +E D V++ ++ AC+
Sbjct: 558 YSVTPTLEHYACVVDLLGRSGHIREAEEFIKKMPLEADGVVWGALLSACW 607
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 202/655 (30%), Positives = 327/655 (49%), Gaps = 114/655 (17%)
Query: 30 QLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQ--------------- 74
+L+ Y+ L+E R++FD M ++NV+ WN ++S K D K+
Sbjct: 139 KLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEG 198
Query: 75 -----ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVT 129
A LFD +D++++NSM+ GY+ + G L ++ +M I +D T+
Sbjct: 199 KRPESAFELFDKLCDRDVISWNSMISGYV-SNGLTERGLGIYKQMMYLG--IDVDLATII 255
Query: 130 STLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEE 189
S L C + G+ +H+ +K+S + ++L+DMYSKC
Sbjct: 256 SVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKC---------------- 299
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
G+++ AL+ F + E N VSW ++I+GY ++G ++ +KL +
Sbjct: 300 ----------------GDLDGALRVFEKMGERN-VVSWTSMIAGYTRDGRSDGAIKLLQQ 342
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
M + GV+ + S L AC ++ K++H ++ N + SN FV + ++D+Y KC
Sbjct: 343 MEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKC-- 400
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
G+ME A F ++ K+++ W + G +K
Sbjct: 401 -----------------------------GSMEAANSVFSTMVVKDIISWNTMI-GELKP 430
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
D+ + +L ACA +AL GKEIH YILR G D+ +
Sbjct: 431 ---------------------DSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHV 469
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+ LVD+Y KCG + A ++F +DLV + VMIA Y HG+ +AI F EM + GI
Sbjct: 470 ANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGI 529
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
+PD V+F++IL A H G +E G ++F M D+ I P+ +HYACM+DL R L KA
Sbjct: 530 EPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAY 589
Query: 550 EFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEG 609
EFM+++P DA I G+ L CR + ELA + E++ LE N YV LAN+YA
Sbjct: 590 EFMETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAE 649
Query: 610 NWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVG-DVSHPKTNAIYSVL 661
W E+ R+R+++ +G++ N GCSW+ ++ ++++F G + SHP + I S+L
Sbjct: 650 KWEEVKRLREKIGKQGLRKN--PGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLL 702
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 161/346 (46%), Gaps = 28/346 (8%)
Query: 225 VSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSW 284
+N I + Q GD E ++L ++ + T+ S L C GL++ K++HS
Sbjct: 67 TDYNAKILHFCQLGDLENAMELICMCQKSELE--TKTYGSVLQLCAGLKSFTDGKKVHSI 124
Query: 285 VLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEE- 343
+ N + + + +V Y C ++ + +N + + M+ Y+ G+ +E
Sbjct: 125 IKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKES 184
Query: 344 -------------------ARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVT 384
A FD L +++V+ W ++ SGYV E + + +
Sbjct: 185 ICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMY 244
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
G+ D ++ +L CA L GK +H+ ++ + +TL+DMYSKCG++
Sbjct: 245 L-GIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLD 303
Query: 445 YAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR 504
A +F+ ER++V + MIA Y G + AI L ++M ++G+K D V +IL A
Sbjct: 304 GALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACA 363
Query: 505 HCGSVEMGEKYFNSMTADYKISPETDHYAC--MIDLYGRANQLEKA 548
GS++ G+ + + A+ + E++ + C ++D+Y + +E A
Sbjct: 364 RSGSLDNGKDVHDYIKAN---NMESNLFVCNALMDMYAKCGSMEAA 406
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 195/616 (31%), Positives = 320/616 (51%), Gaps = 82/616 (13%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
ERN N++++ +K+ + AR +FD +D++++NS++ GY+ + G L +F+
Sbjct: 77 ERNSVG-NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV-SNGLAEKGLSVFV 134
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
+M + I +D T+ S C + GR +H+ VK ++L+DMYSK
Sbjct: 135 QMLVSG--IEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSK 192
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C G+++ A K +R+ VS+ ++I+
Sbjct: 193 C--------------------------------GDLDSA-KAVFREMSDRSVVSYTSMIA 219
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
GY + G A E +KLF M E G+ + +T + L+ C R + K +H W+ +N L
Sbjct: 220 GYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGF 279
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
+ FVS+ ++D+Y KC G+M+EA F +
Sbjct: 280 DIFVSNALMDMYAKC-------------------------------GSMQEAELVFSEMR 308
Query: 353 EKNVVVWTALFSGYVKAQNCEA-----LFDLLSEFVTKEGVVTDALILVILLGACALQAA 407
K+++ W + GY K NC A LF+LL E ++ D + +L ACA +A
Sbjct: 309 VKDIISWNTIIGGYSK--NCYANEALSLFNLLLE---EKRFSPDERTVACVLPACASLSA 363
Query: 408 LHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIAC 467
G+EIH YI+R G D+ + ++LVDMY+KCG + A ++F + +DLV + VMIA
Sbjct: 364 FDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAG 423
Query: 468 YAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISP 527
Y HG ++AI LF +M + GI+ D ++FV++L A H G V+ G ++FN M + KI P
Sbjct: 424 YGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEP 483
Query: 528 ETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKL 587
+HYAC++D+ R L KA F++++P DA I G+ L CR++ + +LA + EK+
Sbjct: 484 TVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKV 543
Query: 588 LRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFT 645
LE N YV +AN+YA W ++ R+RK++ RG++ N GCSW+ ++ ++IF
Sbjct: 544 FELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKN--PGCSWIEIKGRVNIFV 601
Query: 646 VGDVSHPKTNAIYSVL 661
GD S+P+T I + L
Sbjct: 602 AGDSSNPETENIEAFL 617
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 194/441 (43%), Gaps = 71/441 (16%)
Query: 107 ALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSL 166
++ LF +M S+ + MD +T + L +V G QLH F++K+ +SL
Sbjct: 28 SIGLFKKMMSSG--VEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSL 85
Query: 167 IDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVS 226
+ Y K + + A +VF+ TE D +S
Sbjct: 86 VAFYLKNQRVDSARKVFDEMTE---------------------------------RDVIS 112
Query: 227 WNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVL 286
WN++I+GYV NG AE+GL +FV+M +G+ + T S + C R + + +HS +
Sbjct: 113 WNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGV 172
Query: 287 KNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARR 346
K + ++D+Y KC +++ A+++ R+ S +SMI GY+ +G EA +
Sbjct: 173 KACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVK 232
Query: 347 HFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQA 406
F+ + E EG+ D + +L CA
Sbjct: 233 LFEEMEE--------------------------------EGISPDVYTVTAVLNCCARYR 260
Query: 407 ALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIA 466
L GK +H +I + D + + L+DMY+KCG+M AE++F +D++ +N +I
Sbjct: 261 LLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIG 320
Query: 467 CYAHHGHEEKAILLFEEML-EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKI 525
Y+ + + +A+ LF +L EK PD T +L A + + G + + +
Sbjct: 321 GYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYF 380
Query: 526 SPETDHYA-CMIDLYGRANQL 545
S H A ++D+Y + L
Sbjct: 381 SDR--HVANSLVDMYAKCGAL 399
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 142/284 (50%), Gaps = 32/284 (11%)
Query: 218 QPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKC 277
+ ++ A+ WN L++ ++GD + LF +M +GV + +TF+ + LR+V
Sbjct: 3 EVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHG 62
Query: 278 AKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSL 337
+++H ++LK+G G RNS +S++ Y
Sbjct: 63 GEQLHGFILKSGF------------------------------GERNSVG-NSLVAFYLK 91
Query: 338 QGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVI 397
++ AR+ FD +TE++V+ W ++ +GYV E + + + G+ D +V
Sbjct: 92 NQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVS-GIEIDLATIVS 150
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD 457
+ CA + G+ +H+ ++ + + +TL+DMYSKCG++ A+ +F+ +R
Sbjct: 151 VFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS 210
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
+V Y MIA YA G +A+ LFEEM E+GI PD T A+L+
Sbjct: 211 VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLN 254
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 194/591 (32%), Positives = 311/591 (52%), Gaps = 70/591 (11%)
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
D++ AR +FD HK+LVT+ M+ Y + G DA+ LF + ++ D+FT+TS
Sbjct: 197 DIQSARMVFDKMQHKNLVTWTLMITRY-SQLGLLDDAVDLFCRLLVSE--YTPDKFTLTS 253
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L+ CV+L G+QLH++++++ + F +L+DMY+K E + ++F
Sbjct: 254 LLSACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIF------- 306
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
N M+ ++ +SW LISGYVQ+ +E +KLF M
Sbjct: 307 -----NTMLH---------------------HNVMSWTALISGYVQSRQEQEAIKLFCNM 340
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
V N TF+S L AC L + K++H +K GL + V + ++++Y +
Sbjct: 341 LHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYAR---- 396
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
G ME AR+ F+ L EKN++ + KA
Sbjct: 397 ---------------------------SGTMECARKAFNILFEKNLISYNTAADANAKAL 429
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
+ + F+ V GV LL A + G++IHA I++ G + +
Sbjct: 430 DSDESFN---HEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCIN 486
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+ L+ MYSKCGN A +F + R+++ + +I+ +A HG KA+ LF EMLE G+K
Sbjct: 487 NALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVK 546
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
P+ VT++A+LSA H G ++ K+FNSM ++ ISP +HYACM+DL GR+ L +AIE
Sbjct: 547 PNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIE 606
Query: 551 FMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGN 610
F+ S+P + DA++ +FL CR++RN +L A +K+L E ++ A Y+ L+N+YA+EG
Sbjct: 607 FINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKKILEREPHDPATYILLSNLYASEGR 666
Query: 611 WAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
W ++ +RK M+ K + G SW+ V++++H F VGD SHP+ IY L
Sbjct: 667 WDDVAALRKSMKQKKLIKETGYSWIEVDNQVHKFHVGDTSHPQARKIYDEL 717
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 127/518 (24%), Positives = 216/518 (41%), Gaps = 102/518 (19%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMP--ERNVFS 58
+RS NL+ + H + I +GL L ++ N LI +YSK + +F M +R++ S
Sbjct: 50 IRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHKRDLVS 109
Query: 59 WNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM-QSA 117
W+ IIS C + NSM E+ AL F+ M Q +
Sbjct: 110 WSAIIS-CFAN---------------------NSM----------ESRALLTFLHMLQCS 137
Query: 118 DEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVS-SLIDMYSKCRCY 176
I +E+ T+ L C L G + AF++KT S V +LIDM++K
Sbjct: 138 RNIIYPNEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLD 197
Query: 177 EEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQ 236
++ R+ + NL V+W +I+ Y Q
Sbjct: 198 IQSARMVFDKMQHKNL--------------------------------VTWTLMITRYSQ 225
Query: 237 NGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFV 296
G ++ + LF R+ + ++ T S LSAC L K++HSWV+++GL S+ FV
Sbjct: 226 LGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVFV 285
Query: 297 SSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNV 356
+VD+Y K +E +R+ F+++ NV
Sbjct: 286 GCTLVDMYAK-------------------------------SAAVENSRKIFNTMLHHNV 314
Query: 357 VVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHA 416
+ WTAL SGYV+++ + L + V + +L ACA GK++H
Sbjct: 315 MSWTALISGYVQSRQEQEAIKLFCNMLHGH-VTPNCFTFSSVLKACASLPDFGIGKQLHG 373
Query: 417 YILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
+++G+ + ++L++MY++ G M A F E++L+ YN A ++
Sbjct: 374 QTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADANAKALDSDE 433
Query: 477 AILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
+ E+ G+ T+ +LS G++ GE+
Sbjct: 434 S--FNHEVEHTGVGASPFTYACLLSGAACIGTIVKGEQ 469
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 103/448 (22%), Positives = 179/448 (39%), Gaps = 74/448 (16%)
Query: 112 IEMQSADEHIRMDEFTVTSTL-------NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVS 164
++ +S + I + T TS L C++ N+ G+ LH ++ + ++
Sbjct: 19 LKFESLRKAISRLDLTTTSPLIKSSLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLN 78
Query: 165 SLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDA 224
SLI +YSKC +E A +F D
Sbjct: 79 SLITLYSKCGDWENALSIFRNMGHHK-------------------------------RDL 107
Query: 225 VSWNTLISGYVQNGDAEEGLKLFVRM---GENGVRWNEHTFASALSACCGLRNVKCAKEI 281
VSW+ +IS + N L F+ M N + NE+ F + L +C I
Sbjct: 108 VSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTGLAI 167
Query: 282 HSWVLKNGLI-SNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGN 340
+++LK G S+ V ++D++ K G+ +
Sbjct: 168 FAFLLKTGYFDSHVCVGCALIDMFTK-------------GGL-----------------D 197
Query: 341 MEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLG 400
++ AR FD + KN+V WT + + Y + + DL + E D L LL
Sbjct: 198 IQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSE-YTPDKFTLTSLLS 256
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL 460
AC GK++H++++R G+ D + TLVDMY+K + + IF + +++
Sbjct: 257 ACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMS 316
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
+ +I+ Y E++AI LF ML + P+ TF ++L A +G K + T
Sbjct: 317 WTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIG-KQLHGQT 375
Query: 521 ADYKISPETDHYACMIDLYGRANQLEKA 548
+S +I++Y R+ +E A
Sbjct: 376 IKLGLSTINCVGNSLINMYARSGTMECA 403
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 86/146 (58%), Gaps = 9/146 (6%)
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALIL--VILLGACALQAALHPGKEIHAYILRM 421
S Y++A++ + F+ L + +++ + T + ++ +LL AC L GK +H ++
Sbjct: 11 SIYLQAKDLK--FESLRKAISRLDLTTTSPLIKSSLLLKACIRSGNLELGKLLHHKLIDS 68
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF--IERDLVLYNVMIACYAHHGHEEKAIL 479
G+ +D L+++L+ +YSKCG+ A IF+N +RDLV ++ +I+C+A++ E +A+L
Sbjct: 69 GLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHKRDLVSWSAIISCFANNSMESRALL 128
Query: 480 LFEEMLEKG---IKPDAVTFVAILSA 502
F ML+ I P+ F A+L +
Sbjct: 129 TFLHMLQCSRNIIYPNEYCFTALLRS 154
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 188/599 (31%), Positives = 314/599 (52%), Gaps = 66/599 (11%)
Query: 75 ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNL 134
A +FD P ++LVT+ M+ + G DA+ LF++M+ + D FT +S L+
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQL-GCARDAIDLFLDMELSG--YVPDRFTYSSVLSA 60
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
C +L + G+QLH+ +++ SL+DMY+KC
Sbjct: 61 CTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAA------------------- 101
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE-EGLKLFVRMGEN 253
+G ++ + K F + PE N +SW +I+ Y Q+G+ + E ++LF +M
Sbjct: 102 ----------DGSVDDSRKVFEQMPEHN-VMSWTAIITAYAQSGECDKEAIELFCKMISG 150
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA 313
+R N +F+S L AC L + ++++S+ +K G+ S V + ++ +Y +
Sbjct: 151 HIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYAR------- 203
Query: 314 ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE 373
G ME+AR+ FD L EKN+V + A+ GY K E
Sbjct: 204 ------------------------SGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSE 239
Query: 374 ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL 433
F L +E + G+ A LL A A+ G++IH +L+ G + ++ + + L
Sbjct: 240 EAFLLFNE-IADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNAL 298
Query: 434 VDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDA 493
+ MYS+CGN+ A +F +R+++ + MI +A HG +A+ +F +MLE G KP+
Sbjct: 299 ISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNE 358
Query: 494 VTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMK 553
+T+VA+LSA H G + G+K+FNSM ++ I P +HYACM+DL GR+ L +A+EF+
Sbjct: 359 ITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFIN 418
Query: 554 SIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAE 613
S+P DA++ + L CR++ N EL A E +L E ++ A Y+ L+N++A+ G W +
Sbjct: 419 SMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKD 478
Query: 614 MGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
+ +IRK M+ + AGCSW+ VE+ +H F VG+ SHP+ IY L ++ E+
Sbjct: 479 VVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMG 537
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/483 (22%), Positives = 194/483 (40%), Gaps = 100/483 (20%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + I+ GL L L+ +Y+K C +
Sbjct: 74 HSRVIRLGLALDVCVGCSLVDMYAK----------------------------CAADGSV 105
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+R +F+ P +++++ +++ Y + + +A++LF +M S HIR + F+ +S L
Sbjct: 106 DDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISG--HIRPNHFSFSSVL 163
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C L + G Q++++ VK + +SLI MY++ E+A + F+ L
Sbjct: 164 KACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFD------IL 217
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
KN VS+N ++ GY +N +EE LF + +
Sbjct: 218 FEKN---------------------------LVSYNAIVDGYAKNLKSEEAFLLFNEIAD 250
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G+ + TFAS LS + + ++IH +LK G SN + + ++ +Y +C N+
Sbjct: 251 TGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEA 310
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL----TEKNVVVWTALFS---- 364
A + RN S +SMI G++ G A F + T+ N + + A+ S
Sbjct: 311 AFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSH 370
Query: 365 ------------------GYV-KAQNCEALFDLLS---------EFVTKEGVVTDALILV 396
G V + ++ + DLL EF+ ++ DAL+
Sbjct: 371 VGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWR 430
Query: 397 ILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER 456
LLGAC + G+ IL D L ++++ G I ++ ER
Sbjct: 431 TLLGACRVHGNTELGRHAAEMILEQEPD-DPAAYILLSNLHASAGQWKDVVKIRKSMKER 489
Query: 457 DLV 459
+L+
Sbjct: 490 NLI 492
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 195/616 (31%), Positives = 320/616 (51%), Gaps = 82/616 (13%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
ERN N++++ +K+ + AR +FD +D++++NS++ GY+ + G L +F+
Sbjct: 228 ERNSVG-NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV-SNGLAEKGLSVFV 285
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
+M + I +D T+ S C + GR +H+ VK ++L+DMYSK
Sbjct: 286 QMLVSG--IEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSK 343
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C G+++ A K +R+ VS+ ++I+
Sbjct: 344 C--------------------------------GDLDSA-KAVFREMSDRSVVSYTSMIA 370
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
GY + G A E +KLF M E G+ + +T + L+ C R + K +H W+ +N L
Sbjct: 371 GYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGF 430
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
+ FVS+ ++D+Y KC G+M+EA F +
Sbjct: 431 DIFVSNALMDMYAKC-------------------------------GSMQEAELVFSEMR 459
Query: 353 EKNVVVWTALFSGYVKAQNCEA-----LFDLLSEFVTKEGVVTDALILVILLGACALQAA 407
K+++ W + GY K NC A LF+LL E ++ D + +L ACA +A
Sbjct: 460 VKDIISWNTIIGGYSK--NCYANEALSLFNLLLE---EKRFSPDERTVACVLPACASLSA 514
Query: 408 LHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIAC 467
G+EIH YI+R G D+ + ++LVDMY+KCG + A ++F + +DLV + VMIA
Sbjct: 515 FDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAG 574
Query: 468 YAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISP 527
Y HG ++AI LF +M + GI+ D ++FV++L A H G V+ G ++FN M + KI P
Sbjct: 575 YGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEP 634
Query: 528 ETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKL 587
+HYAC++D+ R L KA F++++P DA I G+ L CR++ + +LA + EK+
Sbjct: 635 TVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKV 694
Query: 588 LRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFT 645
LE N YV +AN+YA W ++ R+RK++ RG++ N GCSW+ ++ ++IF
Sbjct: 695 FELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKN--PGCSWIEIKGRVNIFV 752
Query: 646 VGDVSHPKTNAIYSVL 661
GD S+P+T I + L
Sbjct: 753 AGDSSNPETENIEAFL 768
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/477 (25%), Positives = 211/477 (44%), Gaps = 72/477 (15%)
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
DLK+A +FD + + +N +L + G + ++ LF +M S+ + MD +T +
Sbjct: 144 DLKEASRVFDEVKIEKALFWN-ILMNELAKSGDFSGSIGLFKKMMSSG--VEMDSYTFSC 200
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L +V G QLH F++K+ +SL+ Y K + + A +VF+ TE
Sbjct: 201 VSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTER- 259
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
D +SWN++I+GYV NG AE+GL +FV+M
Sbjct: 260 --------------------------------DVISWNSIINGYVSNGLAEKGLSVFVQM 287
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
+G+ + T S + C R + + +HS +K + ++D+Y KC ++
Sbjct: 288 LVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDL 347
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
+ A+++ R+ S +SMI GY+ +G EA + F+ + E
Sbjct: 348 DSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE----------------- 390
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
EG+ D + +L CA L GK +H +I + D +
Sbjct: 391 ---------------EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVS 435
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML-EKGI 489
+ L+DMY+KCG+M AE++F +D++ +N +I Y+ + + +A+ LF +L EK
Sbjct: 436 NALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRF 495
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA-CMIDLYGRANQL 545
PD T +L A + + G + + + S H A ++D+Y + L
Sbjct: 496 SPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR--HVANSLVDMYAKCGAL 550
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 175/384 (45%), Gaps = 75/384 (19%)
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS-----LIDMYSKCRCYE 177
+D T+ S L LC ++ G+++ F+ +GF + S L MY+ C +
Sbjct: 92 IDPRTLCSVLQLCADSKSLKDGKEVDNFI-----RGNGFVIDSNLGSKLSLMYTNCGDLK 146
Query: 178 EACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQN 237
EA RVF+ + ++ A+ WN L++ ++
Sbjct: 147 EASRVFD---------------------------------EVKIEKALFWNILMNELAKS 173
Query: 238 GDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVS 297
GD + LF +M +GV + +TF+ + LR+V +++H ++LK+G
Sbjct: 174 GDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGF------- 226
Query: 298 SGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVV 357
G RNS +S++ Y ++ AR+ FD +TE++V+
Sbjct: 227 -----------------------GERNSVG-NSLVAFYLKNQRVDSARKVFDEMTERDVI 262
Query: 358 VWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
W ++ +GYV E + + + G+ D +V + CA + G+ +H+
Sbjct: 263 SWNSIINGYVSNGLAEKGLSVFVQMLVS-GIEIDLATIVSVFAGCADSRLISLGRAVHSI 321
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
++ + + +TL+DMYSKCG++ A+ +F+ +R +V Y MIA YA G +A
Sbjct: 322 GVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEA 381
Query: 478 ILLFEEMLEKGIKPDAVTFVAILS 501
+ LFEEM E+GI PD T A+L+
Sbjct: 382 VKLFEEMEEEGISPDVYTVTAVLN 405
>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 213/729 (29%), Positives = 364/729 (49%), Gaps = 119/729 (16%)
Query: 19 AGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSL 78
A L +I+ N +IH H ++ + + F N +I+ C KS + AR +
Sbjct: 53 ANLLQLSISRNPIIHYKIIHG------QIIVSGLQSDTFLANILINVCSKSDRVDNARVV 106
Query: 79 FDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQ-SADEHIRMDEFTVTSTLNLCVK 137
FD PHK+L+T++SM+ Y + +GY +AL +F+++Q + EH +EF + S + C +
Sbjct: 107 FDKMPHKNLITWSSMVSMY-SQQGYSEEALMVFVDLQRKSGEH--PNEFVLASVIRACTQ 163
Query: 138 LLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNA 197
L V G QLH F+V++ D + +SLID YSK EEA VF+ +E+
Sbjct: 164 LGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKT------- 216
Query: 198 MVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRW 257
AV+W T+I+GY + G + L+LF +M E V
Sbjct: 217 --------------------------AVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVP 250
Query: 258 NEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESM- 316
+ + +S LSAC L ++ K+IH++VL+ G + V + ++D Y KC + +
Sbjct: 251 DRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLF 310
Query: 317 --LLLKGV-----------RNSFSISSM-------------------------------- 331
+++K + +NSF +M
Sbjct: 311 DQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALE 370
Query: 332 ----IVGYSLQGNME--------------------EARRHFDSLTEKNVVVWTALFSGYV 367
+ Y+++ N+E +A++ FD + E+NV+ + A+ GY
Sbjct: 371 QGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYS 430
Query: 368 KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDK 427
+ +L E + + ++ A L A+L G++ H +++MG+
Sbjct: 431 SQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNL-ASLRHGQQFHNQLVKMGLDFCP 489
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
+ + LVDMY+KCG++ A +F + I RD+V +N MI+ +A HG E+A+ +F EM+++
Sbjct: 490 FVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKE 549
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEK 547
GI+P+ VTFVA+LSA H G VE G +FNSM + I P T+HYAC++ L GR+ +L +
Sbjct: 550 GIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSGKLFE 608
Query: 548 AIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAA 607
A EF++ +P E A++ S L+ CR+ N EL A E + + + Y+ L+N++A+
Sbjct: 609 AKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFAS 668
Query: 608 EGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGE 667
+G WA++ ++R +M + + G SW+ V +++++F D +H + + I SVL I
Sbjct: 669 KGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARDTTHREAD-IGSVLDIL--- 724
Query: 668 LYEIAGAFY 676
+ I GA Y
Sbjct: 725 IQHIKGAGY 733
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 151/579 (26%), Positives = 262/579 (45%), Gaps = 110/579 (18%)
Query: 11 ICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSH 70
I H Q I +GL T N LI++ SK + + +R +FD+MP +N+ +W++++S
Sbjct: 70 IIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVS------ 123
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQ-SADEHIRMDEFTVT 129
+ +GY +AL +F+++Q + EH +EF +
Sbjct: 124 --------------------------MYSQQGYSEEALMVFVDLQRKSGEH--PNEFVLA 155
Query: 130 STLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEE 189
S + C +L V G QLH F+V++ D + +SLID YSK EEA VF+ +E+
Sbjct: 156 SVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEK 215
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
AV+W T+I+GY + G + L+LF +
Sbjct: 216 T---------------------------------AVTWTTIIAGYTKCGRSAVSLELFAQ 242
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
M E V + + +S LSAC L ++ K+IH++VL+ G + V + ++D Y KC
Sbjct: 243 MRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNR 302
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
+ + V+N S ++MI GY + FD W A+
Sbjct: 303 VKAGRKLFDQMVVKNIISWTTMISGY--------MQNSFD---------WEAM------- 338
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
LF ++ G D +L +C + AL G+++HAY ++ ++ D+ +
Sbjct: 339 ----KLFGEMNRL----GWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFV 390
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+ L+DMY+K + A+ +F E++++ YN MI Y+ +A+ LF EM +
Sbjct: 391 KNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQ 450
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTA-DYKISPETDHYACMIDLYGRANQLEKA 548
KP+ TF A+++A + S+ G+++ N + P + ++D+Y + +E+A
Sbjct: 451 KPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTN--ALVDMYAKCGSIEEA 508
Query: 549 IEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKL 587
+ S D V S ++ + GEAEE L
Sbjct: 509 RKMFNS-SIWRDVVCWNSMISTHAQH------GEAEEAL 540
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 123/501 (24%), Positives = 207/501 (41%), Gaps = 133/501 (26%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H ++ G + N LI Y+K N ++ RKLFD+M +N+ SW T+IS
Sbjct: 275 HAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMIS-------- 326
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
GY+ ++ +A+KLF EM + D F TS L
Sbjct: 327 -----------------------GYMQ-NSFDWEAMKLFGEMNRLG--WKPDGFACTSVL 360
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C + GRQ+HA+ +K + ++ F + LIDMY+K +A +VF+ E+ N+
Sbjct: 361 TSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQ-NV 419
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
IS NAM I GY E L+LF M
Sbjct: 420 ISYNAM--------------------------------IEGYSSQEKLSEALELFHEMRV 447
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+ NE TFA+ ++A L +++ ++ H+ ++K GL PFV++ +VD+Y KC
Sbjct: 448 RLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKC----- 502
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G++EEAR+ F+S ++VV W ++ S + +
Sbjct: 503 --------------------------GSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEA 536
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
E + E + KEG+ + + V +L AC+ + G + G++ + +
Sbjct: 537 EEALGMFREMM-KEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPGFGIKPGTEHYAC 595
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
+V + + G + A + FIE+ I+P
Sbjct: 596 VVSLLGRSGKLFEA----KEFIEK------------------------------MPIEPA 621
Query: 493 AVTFVAILSAFRHCGSVEMGE 513
A+ + ++LSA R G+VE+G+
Sbjct: 622 AIVWRSLLSACRIAGNVELGK 642
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 155/363 (42%), Gaps = 75/363 (20%)
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
+R FA+ L + K IH ++ +GL S+ F+++ +++V K + ++ A
Sbjct: 45 LRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNAR 104
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK-------------------- 354
+ +N + SSM+ YS QG EEA F L K
Sbjct: 105 VVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQL 164
Query: 355 --------------------NVVVWTALFSGYVKAQNCEA---LFDLLSEFV-------- 383
+V V T+L Y K N E +FD LSE
Sbjct: 165 GVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTII 224
Query: 384 ---TKEG----------------VVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
TK G VV D ++ +L AC++ L GK+IHAY+LR G +
Sbjct: 225 AGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTE 284
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
MD +++ L+D Y+KC + +F + ++++ + MI+ Y + + +A+ LF EM
Sbjct: 285 MDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEM 344
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA--CMIDLYGRA 542
G KPD ++L++ CGS E E+ K + E+D + +ID+Y ++
Sbjct: 345 NRLGWKPDGFACTSVLTS---CGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKS 401
Query: 543 NQL 545
N L
Sbjct: 402 NLL 404
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 120/264 (45%), Gaps = 67/264 (25%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L++ H IKA L N LI +Y+K NLL +++K+FD M E+NV S+N +I
Sbjct: 369 LEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIE- 427
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
GY + E ++AL+LF EM+ + + +E
Sbjct: 428 ------------------------------GYSSQEKL-SEALELFHEMRVRLQ--KPNE 454
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
FT + + L ++ G+Q H +VK D F ++L+DMY+KC EEA ++F
Sbjct: 455 FTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNS 514
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
+ WR D V WN++IS + Q+G+AEE L
Sbjct: 515 ----------------------------SIWR-----DVVCWNSMISTHAQHGEAEEALG 541
Query: 246 LFVRMGENGVRWNEHTFASALSAC 269
+F M + G++ N TF + LSAC
Sbjct: 542 MFREMMKEGIQPNYVTFVAVLSAC 565
>gi|310656753|gb|ADP02188.1| PPR domain-containing protein [Triticum aestivum]
Length = 788
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 203/640 (31%), Positives = 334/640 (52%), Gaps = 12/640 (1%)
Query: 31 LIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTY 90
++ + K + +R+LFD MP+R V S+ T++ A +K + +A L++ P + +
Sbjct: 155 MVSEHVKAGDIASARRLFDGMPDRTVVSYTTMVDALMKRGRVAEAVELYEQCPSGSVAFF 214
Query: 91 NSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAF 150
+ + G++ E + +AL +F +M S +R + T+ + CV G +
Sbjct: 215 TATISGFVRNELHH-NALGVFRKMLSC--RVRPNGITIVCMIKACVGAGEFGLALSIVGL 271
Query: 151 MVKTSNDASGFAV-SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEME 209
+K++ S V +SLI +Y + A +VF+ + +++S A++ G+++
Sbjct: 272 AIKSNFFESSIEVQNSLITLYLRMGDAAAARKVFDE-MDVKDVVSWTALLDVYSESGDLD 330
Query: 210 MALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
A + PE N+ VSW TLI+ + Q G+A E +KL+ +M +G R N F+S LSAC
Sbjct: 331 GARRVLDAMPERNE-VSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSSVLSAC 389
Query: 270 CGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSIS 329
L +++ IH+ LK G +N FVS ++D+YCKC A+++ +N +
Sbjct: 390 ASLEDLRGGARIHARSLKMGSSTNVFVSCSLIDMYCKCNKCGDAQTIFDTLPQKNIVCWN 449
Query: 330 SMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF--VTKEG 387
S++ GYS G M EA F + +N+ W + SGY AQN D L F + G
Sbjct: 450 SLVSGYSYNGKMVEAMYLFKKMPARNLASWNTIISGY--AQN-RQFVDALKSFNAMLASG 506
Query: 388 VVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAE 447
V + +L ACA +L GK HA +++G++ + + L DMY+K G++ ++
Sbjct: 507 QVPGEITFSSVLLACANLCSLVTGKMAHAKTIKLGIEESIFIGTALSDMYAKSGDLQSSK 566
Query: 448 IIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCG 507
+F ER+ V + MI A +G E++ILLFE+M+ G+ P+ TF+A+L A H G
Sbjct: 567 RMFYQMPERNDVTWTAMIQGLAENGFAEESILLFEDMMATGMTPNEHTFLALLFACSHGG 626
Query: 508 SVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSF 567
VE YF+ M A ISP+ HY CM+D+ RA +L +A + P++ +A +
Sbjct: 627 LVEQAIHYFDKMQA-LGISPKEKHYTCMVDVLARAGRLAEAEALLMKTPSKSEANSWAAL 685
Query: 568 LNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGN 627
L+ C RN E+A A ++L L +N A YV L+N+YA+ G W + RIR M+G
Sbjct: 686 LSACNTYRNEEIAERAAKRLHELAKDNTAGYVLLSNMYASCGRWKDAARIRVLMKGTTLK 745
Query: 628 RFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGE 667
+ GCSWV V + H F + HP + I +L + E
Sbjct: 746 KDGGCSWVQVRGQYHAFFSWEAKHPLSMEIDEILDLLMWE 785
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 121/440 (27%), Positives = 215/440 (48%), Gaps = 46/440 (10%)
Query: 16 AIKAGLTLTTI-TTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQ 74
AIK+ ++I N LI +Y + +RK+FDEM ++V SW ++ +S DL
Sbjct: 272 AIKSNFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSESGDLDG 331
Query: 75 ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNL 134
AR + D+ P ++ V++ +++ + G A+A+KL+ +M + + R + +S L+
Sbjct: 332 ARRVLDAMPERNEVSWGTLIARH-EQRGNAAEAVKLYSQMLA--DGCRPNISCFSSVLSA 388
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
C L ++ G ++HA +K + + F SLIDMY KC +A +F+ ++ N++
Sbjct: 389 CASLEDLRGGARIHARSLKMGSSTNVFVSCSLIDMYCKCNKCGDAQTIFDTLPQK-NIVC 447
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
N++V+ G+M A+ F + P N A SWNT+ISGY QN + LK F M +G
Sbjct: 448 WNSLVSGYSYNGKMVEAMYLFKKMPARNLA-SWNTIISGYAQNRQFVDALKSFNAMLASG 506
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
E TF+S L AC L ++ K H+ +K G+ + F+ + + D+Y K
Sbjct: 507 QVPGEITFSSVLLACANLCSLVTGKMAHAKTIKLGIEESIFIGTALSDMYAK-------- 558
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEA 374
G+++ ++R F + E+N V WTA+ G + E
Sbjct: 559 -----------------------SGDLQSSKRMFYQMPERNDVTWTAMIQGLAENGFAEE 595
Query: 375 LFDLLSEFVTKEGVVTDALILVILLGACA----LQAALHPGKEIHAYILRMGVQMDKKLI 430
LL E + G+ + + LL AC+ ++ A+H ++ A +G+ +K
Sbjct: 596 SI-LLFEDMMATGMTPNEHTFLALLFACSHGGLVEQAIHYFDKMQA----LGISPKEKHY 650
Query: 431 STLVDMYSKCGNMTYAEIIF 450
+ +VD+ ++ G + AE +
Sbjct: 651 TCMVDVLARAGRLAEAEALL 670
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 148/314 (47%), Gaps = 36/314 (11%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L+ H +++K G + + LI +Y K N +++ +FD +P++N+ WN+++S
Sbjct: 394 DLRGGARIHARSLKMGSSTNVFVSCSLIDMYCKCNKCGDAQTIFDTLPQKNIVCWNSLVS 453
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
+ + +A LF P ++L ++N+++ GY + DALK F M ++ +
Sbjct: 454 GYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQF-VDALKSFNAMLASGQ--VPG 510
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
E T +S L C L ++ G+ HA +K + S F ++L DMY+K
Sbjct: 511 EITFSSVLLACANLCSLVTGKMAHAKTIKLGIEESIFIGTALSDMYAK------------ 558
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
G+++ + + F++ PE ND V+W +I G +NG AEE +
Sbjct: 559 --------------------SGDLQSSKRMFYQMPERND-VTWTAMIQGLAENGFAEESI 597
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
LF M G+ NEHTF + L AC V+ A + G+ + +VDV
Sbjct: 598 LLFEDMMATGMTPNEHTFLALLFACSHGGLVEQAIHYFDKMQALGISPKEKHYTCMVDVL 657
Query: 305 CKCENMNYAESMLL 318
+ + AE++L+
Sbjct: 658 ARAGRLAEAEALLM 671
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 206/617 (33%), Positives = 316/617 (51%), Gaps = 49/617 (7%)
Query: 55 NVFSWNTIISACI--KSHDLKQARSLFDSSPHK--DLVTYNSMLCGYINAEGYEADALKL 110
+F+ + +I C S DL A SLF S H+ ++ +N+++ + + +L L
Sbjct: 56 TLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIFIWNTLIRAH-SLTPTPTSSLHL 114
Query: 111 FIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMY 170
F +M + + + T S C K +QLHA +K + +SLI MY
Sbjct: 115 FSQMLHSG--LYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMY 172
Query: 171 SKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTL 230
S+ A VF+ T + +S A++ EG ++ A + F P D VSWN +
Sbjct: 173 SQVGELRHARLVFDKSTLR-DAVSFTALITGYVSEGHVDDARRLFDEIPA-KDVVSWNAM 230
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL 290
I+GYVQ+G EE L F RM E V N+ T S LSAC LR+++ K I SWV G
Sbjct: 231 IAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGF 290
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
N + + +VD+Y KC G + AR+ FD
Sbjct: 291 GKNLQLVNALVDMYSKC-------------------------------GEIGTARKLFDG 319
Query: 351 LTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHP 410
+ +K+V++W + GY E +L E + +E V + + + +L ACA AL
Sbjct: 320 MEDKDVILWNTMIGGYCHLSLYEEAL-VLFEVMLRENVTPNDVTFLAVLPACASLGALDL 378
Query: 411 GKEIHAYILR----MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIA 466
GK +HAYI + G + L ++++ MY+KCG + AE +F++ R L +N MI+
Sbjct: 379 GKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMIS 438
Query: 467 CYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKIS 526
A +GH E+A+ LFEEM+ +G +PD +TFV +LSA G VE+G +YF+SM DY IS
Sbjct: 439 GLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGIS 498
Query: 527 PETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEK 586
P+ HY CMIDL R+ + ++A M ++ E D I GS LN CR++ E E+
Sbjct: 499 PKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAER 558
Query: 587 LLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIF 644
L LE N YV L+N+YA G W ++ +IR ++ +GMK + GC+ + ++ +H F
Sbjct: 559 LFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMK--KVPGCTSIEIDGVVHEF 616
Query: 645 TVGDVSHPKTNAIYSVL 661
VGD HP++ I+ +L
Sbjct: 617 LVGDKFHPQSENIFRML 633
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 142/562 (25%), Positives = 237/562 (42%), Gaps = 117/562 (20%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACI 67
EA H A+K L L LIH+YS+ LR +R +FD+ R+ S+ +I+ +
Sbjct: 145 EAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYV 204
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFT 127
+ AR LFD P KD+V++N+M+ GY+ + +E +AL F MQ AD + ++ T
Sbjct: 205 SEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFE-EALACFTRMQEAD--VSPNQST 261
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
+ S L+ C L ++ G+ + +++ + V++L+DMYSKC A ++F+G
Sbjct: 262 MVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGME 321
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
++ D + WNT+I GY EE L LF
Sbjct: 322 DK---------------------------------DVILWNTMIGGYCHLSLYEEALVLF 348
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKN----GLISNPFVSSGIVDV 303
M V N+ TF + L AC L + K +H+++ KN G ++N + + I+ +
Sbjct: 349 EVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVM 408
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y KC + AE + G R+ S ++MI G ++ G+ E A F+ +
Sbjct: 409 YAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEM------------ 456
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
EG D + V +L AC QA V
Sbjct: 457 --------------------INEGFQPDDITFVGVLSACT-QAGF--------------V 481
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
++ + S++ N Y I L Y MI A G ++A +L
Sbjct: 482 ELGHRYFSSM--------NKDYG-------ISPKLQHYGCMIDLLARSGKFDEAKVLMGN 526
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE-TDHYACMIDLYGRA 542
M ++PD + ++L+A R G VE GE + +++ PE + Y + ++Y A
Sbjct: 527 M---EMEPDGAIWGSLLNACRIHGQVEFGEYVAERL---FELEPENSGAYVLLSNIYAGA 580
Query: 543 NQLEKAIEF--------MKSIP 556
+ + + MK +P
Sbjct: 581 GRWDDVAKIRTKLNDKGMKKVP 602
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 138/339 (40%), Gaps = 71/339 (20%)
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC---KCENMNYAESM 316
H + L+ C ++ K+IHS ++K+GL + F S +++ +C +++YA S+
Sbjct: 26 HPHLNLLAKC---PDIPSLKQIHSLIIKSGLHNTLFAQSKLIE-FCALSPSRDLSYALSL 81
Query: 317 LLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALF 376
H N+ +W L + +
Sbjct: 82 F-----------------------------HSIHHQPPNIFIWNTLIRAHSLTPTPTSSL 112
Query: 377 DLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDM 436
L S+ + G+ ++ L +CA A H K++HA+ L++ + + + ++L+ M
Sbjct: 113 HLFSQML-HSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHM 171
Query: 437 YSKCGNMTYAEIIFQN----------------------------FIE---RDLVLYNVMI 465
YS+ G + +A ++F F E +D+V +N MI
Sbjct: 172 YSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMI 231
Query: 466 ACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKI 525
A Y G E+A+ F M E + P+ T V++LSA H S+E+G K+ S D
Sbjct: 232 AGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELG-KWIGSWVRDRGF 290
Query: 526 SPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVIL 564
++D+Y + ++ A + + E+ VIL
Sbjct: 291 GKNLQLVNALVDMYSKCGEIGTARKLFDGM--EDKDVIL 327
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 111/273 (40%), Gaps = 73/273 (26%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
+RSL L + + V+ G L + N L+ +YSK + +RKLFD M +++V WN
Sbjct: 272 LRSLELGKWIGSWVRDRGFGKNLQLV--NALVDMYSKCGEIGTARKLFDGMEDKDVILWN 329
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
T+I GY + YE +AL LF M E+
Sbjct: 330 TMIG-------------------------------GYCHLSLYE-EALVLFEVMLR--EN 355
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVK----TSNDASGFAVSSLIDMYSKCRCY 176
+ ++ T + L C L + G+ +HA++ K T N + +S+I MY+KC C
Sbjct: 356 VTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCV 415
Query: 177 EEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQ 236
E A +VF +L S NAM ISG
Sbjct: 416 EVAEQVFRSMGSR-SLASWNAM--------------------------------ISGLAM 442
Query: 237 NGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
NG AE L LF M G + ++ TF LSAC
Sbjct: 443 NGHAERALGLFEEMINEGFQPDDITFVGVLSAC 475
>gi|255575746|ref|XP_002528772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531775|gb|EEF33594.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 214/673 (31%), Positives = 349/673 (51%), Gaps = 53/673 (7%)
Query: 30 QLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVT 89
L+ YS+ + E+R LFD MPERN S+N ++S ++ L +A LF+ P +++V+
Sbjct: 15 SLLSKYSRSGFVDEARALFDIMPERNAVSYNALLSGLLQCGRLSEAMKLFEEMPERNVVS 74
Query: 90 YNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHA 149
+ SMLCG +A G +A LF EM + V S + V L+ G +
Sbjct: 75 WTSMLCGLADA-GKICEAKSLFEEMPDRN---------VVSWNAMIVGLIRNG-DLEAAR 123
Query: 150 FMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEME 209
+ S + + + +I Y++ EEA +F+ E+ N+I+ +MV+ CR GE+E
Sbjct: 124 MVFDESPVKNAASWNGMIAGYAENGRMEEARALFDE-MEDRNVITWTSMVSGYCRAGEVE 182
Query: 210 MALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG-VRWNEHTFASALSA 268
F P+ N VSW +I G+ NG E+ L LF+ M + N TF S A
Sbjct: 183 EGYHLFRTMPKRN-IVSWTAMIGGFTWNGFYEDALLLFLEMKRGADITPNIETFISLAYA 241
Query: 269 CCGLRNVKCAKEIHSWVLKNGLISNPF---VSSGIVDVYCKCENMNYAESML-------- 317
C GL + K++H+ ++ GL ++ + +S G++ +Y M+YA +
Sbjct: 242 CAGLGFHRLGKQLHARLITEGLDNDDYDGRLSKGLICMYSSIGFMDYAHYIFNKNSNYYV 301
Query: 318 ------LLKG------------------VRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
++ G VR+ + +SMI GY + GN+ EA F + E
Sbjct: 302 VQSCNYMINGYIRIGLLDKAQNLFDTMPVRDKITWTSMIDGYLVIGNVSEACSLFLYMPE 361
Query: 354 KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
K+ V WT + SG+V+ + L SE +T +GV + IL GA A+L G++
Sbjct: 362 KDAVAWTTMISGHVRNELFAEATYLFSEMLT-QGVRPLSSTYAILFGAAGAVASLDQGRQ 420
Query: 414 IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH 473
+HA + + D L ++L+ MY+KCG + A IF I DL+ +N MI ++HHG
Sbjct: 421 LHAMLTKTLSDNDLILENSLISMYAKCGEIRNAYRIFSQMISHDLISWNSMIMGFSHHGL 480
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA 533
+A+ +FE M++ G P++VTF+ +LSA H G + G + FN+M+ + + P +HY
Sbjct: 481 ANEALEVFEAMVDSGTHPNSVTFLGVLSACSHAGLINQGWEIFNAMSDVFAVQPGLEHYI 540
Query: 534 CMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLN-RNAELAGEAEEKLLRLEG 592
CM++L GRA +L++A E + +P E + I G+ L VC + +NA++A A ++L L+
Sbjct: 541 CMVNLLGRAGKLKEAEELILGLPLERNHAIWGALLGVCSFSEKNADIAKRAATRILELDP 600
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKG-NRFAGCSWVYVEHEIHIFTVGDVSH 651
N +V L N+YAA G E ++RK+M G+KG + GCSW+ + +H+F GD
Sbjct: 601 LNAPAHVLLCNIYAASGQHIEEHKLRKEM-GLKGVKKVPGCSWIVLNGRVHVFLSGDKPR 659
Query: 652 PKTNAIYSVLAIF 664
+ + S+L F
Sbjct: 660 LQAKDMLSLLFQF 672
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 188/414 (45%), Gaps = 46/414 (11%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLV 88
N +I Y+++ + E+R LFDEM +RNV +W +++S ++ ++++ LF + P +++V
Sbjct: 138 NGMIAGYAENGRMEEARALFDEMEDRNVITWTSMVSGYCRAGEVEEGYHLFRTMPKRNIV 197
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLH 148
++ +M+ G+ G+ DAL LF+EM+ + I + T S C L G+QLH
Sbjct: 198 SWTAMIGGF-TWNGFYEDALLLFLEMKRGAD-ITPNIETFISLAYACAGLGFHRLGKQLH 255
Query: 149 AFMVK---TSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
A ++ ++D G LI MYS + A +F + + S N M+ R
Sbjct: 256 ARLITEGLDNDDYDGRLSKGLICMYSSIGFMDYAHYIFNKNSNYYVVQSCNYMINGYIRI 315
Query: 206 GEMEMALKTF----------WRQ---------------------PELNDAVSWNTLISGY 234
G ++ A F W PE DAV+W T+ISG+
Sbjct: 316 GLLDKAQNLFDTMPVRDKITWTSMIDGYLVIGNVSEACSLFLYMPE-KDAVAWTTMISGH 374
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
V+N E LF M GVR T+A A + ++ +++H+ + K ++
Sbjct: 375 VRNELFAEATYLFSEMLTQGVRPLSSTYAILFGAAGAVASLDQGRQLHAMLTKTLSDNDL 434
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHF----DS 350
+ + ++ +Y KC + A + + S +SMI+G+S G EA F DS
Sbjct: 435 ILENSLISMYAKCGEIRNAYRIFSQMISHDLISWNSMIMGFSHHGLANEALEVFEAMVDS 494
Query: 351 LTEKNVVVWTALFSGYVKA----QNCEALFDLLSEFVTKEGVVTDALILVILLG 400
T N V + + S A Q E +F+ +S+ + + + +V LLG
Sbjct: 495 GTHPNSVTFLGVLSACSHAGLINQGWE-IFNAMSDVFAVQPGLEHYICMVNLLG 547
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 98/224 (43%), Gaps = 46/224 (20%)
Query: 298 SGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVV 357
+ ++ Y + ++ A ++ + RN+ S ++++ G G + EA + F+ + E+NVV
Sbjct: 14 TSLLSKYSRSGFVDEARALFDIMPERNAVSYNALLSGLLQCGRLSEAMKLFEEMPERNVV 73
Query: 358 VWTALFSGYVKAQN-CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHA 416
WT++ G A CEA L E + V +A+I+ ++
Sbjct: 74 SWTSMLCGLADAGKICEAK-SLFEEMPDRNVVSWNAMIVGLI------------------ 114
Query: 417 YILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
+ G++ A ++F ++ +N MIA YA +G E+
Sbjct: 115 ----------------------RNGDLEAARMVFDESPVKNAASWNGMIAGYAENGRMEE 152
Query: 477 AILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
A LF+EM ++ + +T+ +++S + G VE G F +M
Sbjct: 153 ARALFDEMEDRNV----ITWTSMVSGYCRAGEVEEGYHLFRTMP 192
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 201/655 (30%), Positives = 327/655 (49%), Gaps = 114/655 (17%)
Query: 30 QLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQ--------------- 74
+L+ Y+ L+E R++FD M ++NV+ WN ++S K D K+
Sbjct: 139 KLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEG 198
Query: 75 -----ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVT 129
A LFD +D++++NSM+ GY+ + G L ++ +M I +D T+
Sbjct: 199 KRPESAFELFDKLCDRDVISWNSMISGYV-SNGLTERGLGIYKQMMYLG--IDVDLATII 255
Query: 130 STLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEE 189
S L C + G+ +H+ +K+S + ++L+DMYSKC
Sbjct: 256 SVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKC---------------- 299
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
G+++ AL+ F + E N VSW ++I+GY ++G ++ +KL +
Sbjct: 300 ----------------GDLDGALRVFEKMGERN-VVSWTSMIAGYTRDGRSDGAIKLLQQ 342
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
M + GV+ + S L AC ++ K++H ++ N + SN FV + ++D+Y KC
Sbjct: 343 MEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKC-- 400
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
G+ME A F ++ K+++ W + G +K
Sbjct: 401 -----------------------------GSMEAANSVFSTMVVKDIISWNTMI-GELKP 430
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
D+ + +L ACA +AL GKEIH YILR G D+ +
Sbjct: 431 ---------------------DSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHV 469
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+ LVD+Y KCG + A ++F +DLV + VMIA Y HG+ +AI F EM + GI
Sbjct: 470 ANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGI 529
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
+PD V+F++IL A H G +E G ++F M D+ I P+ +HYACM+DL R L KA
Sbjct: 530 EPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAY 589
Query: 550 EFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEG 609
EF++++P DA I G+ L CR + ELA + E++ LE N YV LAN+YA
Sbjct: 590 EFIETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENSGYYVLLANIYAEAE 649
Query: 610 NWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVG-DVSHPKTNAIYSVL 661
W E+ R+R+++ +G++ N GCSW+ ++ ++++F G + SHP + I S+L
Sbjct: 650 KWEEVKRLREKIGKQGLRKN--PGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLL 702
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 162/346 (46%), Gaps = 28/346 (8%)
Query: 225 VSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSW 284
+N I + Q GD E ++L ++ + T++S L C GL++ K++HS
Sbjct: 67 TDYNAKILHFCQLGDLENAMELICMCKKSELE--TKTYSSVLQLCAGLKSFTDGKKVHSI 124
Query: 285 VLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEE- 343
+ N + + + +V Y C ++ + +N + + M+ Y+ G+ +E
Sbjct: 125 IKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKES 184
Query: 344 -------------------ARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVT 384
A FD L +++V+ W ++ SGYV E + + +
Sbjct: 185 ICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMY 244
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
G+ D ++ +L CA L GK +H+ ++ + +TL+DMYSKCG++
Sbjct: 245 L-GIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLD 303
Query: 445 YAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR 504
A +F+ ER++V + MIA Y G + AI L ++M ++G+K D V +IL A
Sbjct: 304 GALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACA 363
Query: 505 HCGSVEMGEKYFNSMTADYKISPETDHYAC--MIDLYGRANQLEKA 548
GS++ G+ + + A+ + E++ + C ++D+Y + +E A
Sbjct: 364 RSGSLDNGKDVHDYIKAN---NMESNLFVCNALMDMYAKCGSMEAA 406
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 203/659 (30%), Positives = 329/659 (49%), Gaps = 74/659 (11%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H K+ + +T +N +YSK L ++ FD NVFS+NT+I+A K +
Sbjct: 32 HALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLTQYPNVFSYNTLINAYAKHSLI 91
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
AR +FD P D+V+YN+++ Y + G AL+LF E++ + +D FT++ +
Sbjct: 92 HLARQVFDEIPQPDIVSYNTLIAAYAD-RGECRPALRLFAEVR--ELRFGLDGFTLSGVI 148
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C +VG RQLH F+V D C VN
Sbjct: 149 IACGD--DVGLVRQLHCFVVVCGYD----------------------------CYASVN- 177
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELN--DAVSWNTLISGYVQNGDAEEGLKLFVRM 250
NA++A R+G + A + F E D VSWN +I Q+ + E ++LF M
Sbjct: 178 ---NAVLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREM 234
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
G++ + T AS L+A ++++ + H ++K+G N V SG++D+Y KC
Sbjct: 235 VRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKC--- 291
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
G M E R+ F+ + ++V+W + SG+ + +
Sbjct: 292 ---------------------------AGGMVECRKVFEEIAAPDLVLWNTMISGFSQYE 324
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
+ + G D V + AC+ ++ GK++HA ++ + ++ +
Sbjct: 325 DLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSV 384
Query: 431 S-TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+ LV MYSKCGN+ A +F E ++V N MIA YA HG E +++ LFE ML+K I
Sbjct: 385 NNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDI 444
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
P+ +TF+A+LSA H G VE G+KYFN M ++I PE +HY+CMIDL GRA +L++A
Sbjct: 445 APNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAE 504
Query: 550 EFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEG 609
++++P ++ + L CR + N ELA +A + L+LE N A YV L+N+YA+
Sbjct: 505 RIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQLEPYNAAPYVMLSNMYASAA 564
Query: 610 NWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
W E +++ MR + GCSW+ ++ ++H+F D SHP I+ ++ GE+
Sbjct: 565 RWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIH----VYMGEI 619
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/448 (24%), Positives = 195/448 (43%), Gaps = 44/448 (9%)
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
T + L C+ ++ G+ LHA K+ S + + +YSKC A F+
Sbjct: 11 TFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFD-L 69
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
T+ N+ S N ++ A + + +A + F P+ D VS+NTLI+ Y G+ L+L
Sbjct: 70 TQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQ-PDIVSYNTLIAAYADRGECRPALRL 128
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
F + E + T + + AC +V +++H +V+ G D Y
Sbjct: 129 FAEVRELRFGLDGFTLSGVIIACGD--DVGLVRQLHCFVVVCGY-----------DCYAS 175
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE---KNVVVWTALF 363
N +++ YS +G + EARR F + E ++ V W A+
Sbjct: 176 VNN--------------------AVLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMI 215
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
+ + +L E V + G+ D + +L A L G + H +++ G
Sbjct: 216 VACGQHREGLEAVELFREMV-RRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGF 274
Query: 424 QMDKKLISTLVDMYSKC-GNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH-EEKAILLF 481
+ + S L+D+YSKC G M +F+ DLVL+N MI+ ++ + E I F
Sbjct: 275 HGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCF 334
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK-YFNSMTADYKISPETDHYACMIDLYG 540
EM G PD +FV + SA + S +G++ + ++ +D + + + A ++ +Y
Sbjct: 335 REMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNA-LVAMYS 393
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFL 568
+ + A ++P E + V L S +
Sbjct: 394 KCGNVHDARRVFDTMP-EHNMVSLNSMI 420
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 133/285 (46%), Gaps = 7/285 (2%)
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLL 319
TF + L AC R++ K +H+ K+ + + ++S+ +Y KC +++ A++ L
Sbjct: 10 QTFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDL 69
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLL 379
N FS +++I Y+ + AR+ FD + + ++V + L + Y C L
Sbjct: 70 TQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLF 129
Query: 380 SEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
+E V + D L ++ AC L +++H +++ G + + ++ YS+
Sbjct: 130 AE-VRELRFGLDGFTLSGVIIACGDDVGL--VRQLHCFVVVCGYDCYASVNNAVLACYSR 186
Query: 440 CGNMTYAEIIFQNFIE---RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTF 496
G + A +F+ E RD V +N MI H +A+ LF EM+ +G+K D T
Sbjct: 187 KGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTM 246
Query: 497 VAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGR 541
++L+AF C +G F+ M + + +IDLY +
Sbjct: 247 ASVLTAFT-CVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSK 290
>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 904
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 192/608 (31%), Positives = 319/608 (52%), Gaps = 35/608 (5%)
Query: 54 RNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIE 113
+++F N+++ + +L AR +FD +++V++ SM+CGY E + DA+ LF
Sbjct: 166 KDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYARRE-FAKDAVDLFFR 224
Query: 114 MQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKC 173
M DE + + T+ ++ C KL ++ G +++ F+ + + + +S+L+DMY KC
Sbjct: 225 MVR-DEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDMYMKC 283
Query: 174 RCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISG 233
+ A R+F+ G + L N + S
Sbjct: 284 NAIDIAKRLFD-------------------EYGASNLDL--------------CNAMASN 310
Query: 234 YVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISN 293
YV+ G +E L + M ++G+R + + SA+S+C LRN+ K H +VL+NG S
Sbjct: 311 YVRQGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESW 370
Query: 294 PFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
+ + ++D+Y KC + A + + + +S++ GY G ++ A F+++ E
Sbjct: 371 DNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYIENGEVDAAWETFNTMPE 430
Query: 354 KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
KN+V W + S V+ E ++ ++E V D + ++ + AC AL K
Sbjct: 431 KNIVSWNTIISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKW 490
Query: 414 IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH 473
I+ YI + +Q+D +L +TLVDM+S+CG+ A IF + RD+ + I A G+
Sbjct: 491 IYYYIEKNRIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGN 550
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA 533
E+AI LF EM+E+G+KPD V F+ L+A H G V+ G++ FNSM + +SPE HY
Sbjct: 551 VERAIELFNEMIEQGLKPDGVVFIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYG 610
Query: 534 CMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGN 593
CM+DL GRA LE+A++ +K +PTE + VI S L CR+ N E+A A EK+ L
Sbjct: 611 CMVDLLGRAGLLEEALQLIKDMPTEPNDVIWNSLLAACRVQGNVEMAAFAAEKIQVLAPE 670
Query: 594 NKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPK 653
YV L+NVYA+ G W +M ++R M+ + G S + + + H FT GD SHP+
Sbjct: 671 RTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSVIQIRGKTHEFTSGDESHPE 730
Query: 654 TNAIYSVL 661
I ++L
Sbjct: 731 MRKIEAML 738
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 138/546 (25%), Positives = 232/546 (42%), Gaps = 111/546 (20%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT----------- 61
H IK N L+H Y++ L +RK+FDEM ERNV SW +
Sbjct: 156 HGLIIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYARREFA 215
Query: 62 -------------------------IISACIKSHDLKQ---------------------- 74
+ISAC K DL+
Sbjct: 216 KDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMISA 275
Query: 75 -------------ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
A+ LFD +L N+M Y+ +G +AL + M D I
Sbjct: 276 LVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVR-QGLTKEALGVLNLMM--DSGI 332
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
R D ++ S ++ C +L N+ +G+ H ++++ ++ ++LIDMY KC + A R
Sbjct: 333 RPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFR 392
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F+ + + +++ N++VA GE++ A +TF PE N VSWNT+IS VQ E
Sbjct: 393 IFDRMSNKT-VVTWNSIVAGYIENGEVDAAWETFNTMPEKN-IVSWNTIISALVQENMYE 450
Query: 242 EGLKLFVRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
E +++F M + V + T S SAC L + AK I+ ++ KN + + + + +
Sbjct: 451 EAIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTL 510
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
VD++ +C G+ E A F+SLT ++V WT
Sbjct: 511 VDMFSRC-------------------------------GDPESAMSIFNSLTNRDVSAWT 539
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
A A N E +L +E + ++G+ D ++ + L AC + GKEI + +
Sbjct: 540 AAIGAMAMAGNVERAIELFNEMI-EQGLKPDGVVFIGALTACCHGGLVQQGKEIFNSMEK 598
Query: 421 M-GVQMDKKLISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
+ GV + +VD+ + G + A ++I E + V++N ++A G+ E A
Sbjct: 599 LHGVSPEDVHYGCMVDLLGRAGLLEEALQLIKDMPTEPNDVIWNSLLAACRVQGNVEMAA 658
Query: 479 LLFEEM 484
E++
Sbjct: 659 FAAEKI 664
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 156/322 (48%), Gaps = 36/322 (11%)
Query: 184 EGCTEEVNLISKNAMVAACCREGEME---MALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+G ++V+ I+K +VA C G E A + F +N+LI GY +G
Sbjct: 57 QGLDDDVSAITK--LVARSCELGTRESLSFAKEVFENGESYGTCFMYNSLIRGYASSGLC 114
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
+E + LF+RM +G+ +++TF LS C R+ +IH ++K + FV + +
Sbjct: 115 KEAILLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGNGIQIHGLIIKMDYAKDLFVQNSL 174
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
V Y +C ++ A + RN S +SMI GY ARR F K+ V
Sbjct: 175 VHFYAECGELDCARKVFDEMSERNVVSWTSMICGY--------ARREF----AKDAV--- 219
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
DL V E V+ +++ +V ++ ACA L G++++ +I
Sbjct: 220 ----------------DLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRD 263
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
G++++ +IS LVDMY KC + A+ +F + +L L N M + Y G ++A+ +
Sbjct: 264 SGIEVNDLMISALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGV 323
Query: 481 FEEMLEKGIKPDAVTFVAILSA 502
M++ GI+PD ++ ++ +S+
Sbjct: 324 LNLMMDSGIRPDRISMLSAISS 345
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 152/337 (45%), Gaps = 41/337 (12%)
Query: 12 CHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHD 71
CH ++ G N LI +Y K + + ++FD M + V +WN+I++ I++ +
Sbjct: 358 CHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYIENGE 417
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
+ A F++ P K++V++N+++ + YE +A+++F MQS E + +D T+ S
Sbjct: 418 VDAAWETFNTMPEKNIVSWNTIISALVQENMYE-EAIEVFHYMQS-QECVNVDGVTMMSI 475
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
+ C L + + ++ ++ K ++L+DM+S+C E A +F T
Sbjct: 476 ASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR-- 533
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
D +W I G+ E ++LF M
Sbjct: 534 -------------------------------DVSAWTAAIGAMAMAGNVERAIELFNEMI 562
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG-IVDVYCKCENM 310
E G++ + F AL+ACC V+ KEI + + K +S V G +VD+ + +
Sbjct: 563 EQGLKPDGVVFIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLL 622
Query: 311 NYAESMLLLKGV---RNSFSISSMIVGYSLQGNMEEA 344
E++ L+K + N +S++ +QGN+E A
Sbjct: 623 E--EALQLIKDMPTEPNDVIWNSLLAACRVQGNVEMA 657
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 191/586 (32%), Positives = 301/586 (51%), Gaps = 39/586 (6%)
Query: 75 ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNL 134
A S+F + + + +N+ML GY + ALKL++ M S + + +T L
Sbjct: 19 AISVFATIQEPNQLIWNTMLRGYALSSD-PVSALKLYVVMISLG--LLPNSYTFPFLLKS 75
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
C K G+Q+H ++K + + +SLI MY++ E+A +VF+ + +++S
Sbjct: 76 CAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHR-DVVS 134
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
A++ G + A + F P + D VSWN +ISGY + G +E L+LF M +
Sbjct: 135 YTALITGYASSGNIRSAQEMFDEIP-VKDVVSWNAMISGYAETGSYKEALELFKEMMKTN 193
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
VR +E T + LSAC R+V+ +++HSW+ +G SN + + ++D+Y KC
Sbjct: 194 VRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKC------- 246
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEA 374
G +E A F+ L+ K+VV W L GY +
Sbjct: 247 ------------------------GQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKE 282
Query: 375 LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM--GVQMDKKLIST 432
L E + + G + + +V +L ACA A+ G+ IH YI + V L ++
Sbjct: 283 ALLLFQEML-RSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTS 341
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
L+DMY+KCG++ A +F + + + L +N MI +A HG LF M + GI+PD
Sbjct: 342 LIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPD 401
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
+TFV +LSA H G +++G F SMT DY I+P+ +HY CMIDL G + ++A E +
Sbjct: 402 DITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMI 461
Query: 553 KSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWA 612
K++P E D VI S L CR + N ELA L+++E N YV L+N+YA G W
Sbjct: 462 KTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENPGSYVLLSNIYATAGEWD 521
Query: 613 EMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
E+ ++R + G + GCS + ++ E+H F VGD HP+ IY
Sbjct: 522 EVAKVRALLNGKGMKKVPGCSSIEIDSEVHEFIVGDKLHPRNREIY 567
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 148/571 (25%), Positives = 249/571 (43%), Gaps = 125/571 (21%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
+S +E H +K G LI +Y+++ L ++ K+FD R+V S+
Sbjct: 78 KSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTA 137
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I+ S +++ A+ +FD P KD+V++N+M+ GY Y+ +AL+LF EM + +
Sbjct: 138 LITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYK-EALELFKEMMKTN--V 194
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFA-----VSSLIDMYSKCRCY 176
R DE T+ + L+ C + +V GRQ+H+++ D GF V++LID+YSKC
Sbjct: 195 RPDEGTMVTVLSACAQSRSVELGRQVHSWI-----DDHGFGSNLKIVNALIDLYSKCGQV 249
Query: 177 EEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQ 236
E AC +FEG + C+ D VSWNTLI GY
Sbjct: 250 ETACGLFEGLS---------------CK------------------DVVSWNTLIGGYTH 276
Query: 237 NGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLK--NGLISNP 294
+E L LF M +G N+ T S L AC L + + IH ++ K + + P
Sbjct: 277 MNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAP 336
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
+ + ++D+Y KC G++E A + F+S+ K
Sbjct: 337 SLRTSLIDMYAKC-------------------------------GDIEAAHQVFNSMLHK 365
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
++ W A+ G+ A FDL S + K G+ D + V LL AC+ H GK
Sbjct: 366 SLSSWNAMIFGFAMHGRANAGFDLFSR-MRKNGIEPDDITFVGLLSACS-----HSGK-- 417
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
+ + + + ++ Y I L Y MI H G
Sbjct: 418 --------LDLGRHIFKSMTQDYD---------------ITPKLEHYGCMIDLLGHSGLF 454
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD-HYA 533
++A + + M ++PD V + ++L A R G++E+ E + ++ K+ PE Y
Sbjct: 455 KEAKEMIKTM---PMEPDGVIWCSLLKACRRHGNLELAESFARNLM---KVEPENPGSYV 508
Query: 534 CMIDLYGRANQLEKAIEF--------MKSIP 556
+ ++Y A + ++ + MK +P
Sbjct: 509 LLSNIYATAGEWDEVAKVRALLNGKGMKKVP 539
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 117/281 (41%), Gaps = 28/281 (9%)
Query: 14 VQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLK 73
V + A L I + IH+Y +KL D ++ + ++I K D++
Sbjct: 303 VSILPACAHLGAIDIGRWIHVYI-------DKKLKDVTNAPSLRT--SLIDMYAKCGDIE 353
Query: 74 QARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLN 133
A +F+S HK L ++N+M+ G+ G LF M+ I D+ T L+
Sbjct: 354 AAHQVFNSMLHKSLSSWNAMIFGFA-MHGRANAGFDLFSRMRK--NGIEPDDITFVGLLS 410
Query: 134 LCVKLLNVGFGRQLHAFMVKTSNDASGFA-VSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C + GR + M + + +ID+ ++EA + + E +
Sbjct: 411 ACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDG 470
Query: 193 ISKNAMVAACCREGEMEMALKTFWR---QPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
+ +++ AC R G +E+A ++F R + E + S+ L + Y G+ +E K VR
Sbjct: 471 VIWCSLLKACRRHGNLELA-ESFARNLMKVEPENPGSYVLLSNIYATAGEWDEVAK--VR 527
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL 290
NG + G +++ E+H +++ + L
Sbjct: 528 ALLNG---------KGMKKVPGCSSIEIDSEVHEFIVGDKL 559
>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 182/613 (29%), Positives = 313/613 (51%), Gaps = 68/613 (11%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
+VF + ++ +K + + +F P +++V++ +++ G + A GY +AL F +M
Sbjct: 102 SVFVGSALVDMYMKIGKVDEGCIVFKEMPLRNVVSWTAIIAGLVRA-GYNKEALAYFSDM 160
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
+ + D +T +S L C + +GR++H +K A F ++L MY+KC
Sbjct: 161 WI--QKVGCDTYTFSSALKACADSGALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCG 218
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
+ R+FE T+ D VSW T+I
Sbjct: 219 KLDYGLRLFESMTQR---------------------------------DVVSWTTIIMSN 245
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
VQ G E +K F RM E V NE TFA+ +S C L ++ +++H+ V++ GL+ +
Sbjct: 246 VQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSL 305
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
V++ I+ +Y KC ++ A ++ F L+ +
Sbjct: 306 SVANSIMAMYSKCWQLDLASTV-------------------------------FQGLSRR 334
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
+++ W+ + SGY + E FD LS ++ +EG + +L C A L GK++
Sbjct: 335 DIISWSTMISGYAQGGCGEEAFDYLS-WMRREGPRPNEFAFASVLSVCGNMAILEQGKQL 393
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
HA++L +G++ + + S L++MYSKCG++ A IF ++V + MI YA HG+
Sbjct: 394 HAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYS 453
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC 534
++AI LF+++ + G++PD+VTF+A+L+A H G V++G YFNS++ ++I P DHY C
Sbjct: 454 QEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGFHYFNSLSKVHQICPSKDHYGC 513
Query: 535 MIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNN 594
MIDL RA +L A ++S+P + D V+ + L CR++ + + A EK+L+L+ N
Sbjct: 514 MIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLLRACRIHGDVDCGKRAAEKILQLDPNC 573
Query: 595 KARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKT 654
++ LAN+YAA+G W E +RK M+ + G SW+ + + F GD SHP+
Sbjct: 574 AVTHITLANMYAAKGKWKEAAEVRKMMKSKGVVKEPGWSWIKFKDRVSAFVSGDRSHPEG 633
Query: 655 NAIYSVLAIFTGE 667
IY VL + +
Sbjct: 634 EYIYDVLDLLASQ 646
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/494 (24%), Positives = 209/494 (42%), Gaps = 104/494 (21%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H Q +K G T + N L +Y+K L +LF+ M +R+V SW TII + ++
Sbjct: 192 HCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQI--- 248
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
G E +A+K F M+ D + +EFT + +
Sbjct: 249 -----------------------------GQEENAVKAFRRMRETD--VSPNEFTFAAVI 277
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C L + +G QLHA +++ S +S++ MYSKC + A VF+G +
Sbjct: 278 SGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRR--- 334
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
D +SW+T+ISGY Q G EE M
Sbjct: 335 ------------------------------DIISWSTMISGYAQGGCGEEAFDYLSWMRR 364
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G R NE FAS LS C + ++ K++H+ VL GL N V S ++++Y KC
Sbjct: 365 EGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKC----- 419
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G+++EA + FD N+V WTA+ +GY +
Sbjct: 420 --------------------------GSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYS 453
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM-GVQMDKKLIS 431
+ DL + + K G+ D++ + +L AC+ + G + ++ + K
Sbjct: 454 QEAIDLFKK-LPKVGLRPDSVTFIAVLAACSHAGLVDLGFHYFNSLSKVHQICPSKDHYG 512
Query: 432 TLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
++D+ + G + AE + Q+ +RD V+++ ++ HG + E++L+ +
Sbjct: 513 CMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLLRACRIHGDVDCGKRAAEKILQ--LD 570
Query: 491 PD-AVTFVAILSAF 503
P+ AVT + + + +
Sbjct: 571 PNCAVTHITLANMY 584
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 88/240 (36%), Gaps = 69/240 (28%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L++ H + GL T+ + LI++YSK ++E+ K+FDE N+ SW +I+
Sbjct: 387 LEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMIN- 445
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
GY GY +A+ LF ++ +R D
Sbjct: 446 ------------------------------GYAE-HGYSQEAIDLFKKLPKVG--LRPDS 472
Query: 126 FTVTSTLNLC--VKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
T + L C L+++GF H F +SL ++ C +
Sbjct: 473 VTFIAVLAACSHAGLVDLGF----HYF-------------NSLSKVHQICPSKDHY---- 511
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
GC M+ CR G + A P D V W+TL+ +GD + G
Sbjct: 512 -GC-----------MIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLLRACRIHGDVDCG 559
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 193/605 (31%), Positives = 320/605 (52%), Gaps = 68/605 (11%)
Query: 54 RNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIE 113
R+VF +++++ K+ +AR +FD+ P ++ V++ +M+ GY ++ A+AL LF
Sbjct: 141 RDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYA-SQKLAAEALGLFRL 199
Query: 114 MQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKC 173
M+ +E +EF TS L+ V G+Q+H VK + ++L+ MY+KC
Sbjct: 200 MRREEEG--ENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKC 257
Query: 174 RCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISG 233
G ++ AL+TF + N +++W+ +I+G
Sbjct: 258 --------------------------------GSLDDALQTFETSSDKN-SITWSAMITG 284
Query: 234 YVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISN 293
Y Q+GD+++ LKLF M +G+R +E TF ++AC L K++H ++LK G S
Sbjct: 285 YAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQ 344
Query: 294 PFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
+V + +VD+Y KC SS++ +AR+ FD L E
Sbjct: 345 IYVMTALVDMYAKC---------------------SSIV----------DARKGFDYLQE 373
Query: 354 KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
++V+WT++ GYV+ E L + EG++ + L + +L AC+ AAL GK+
Sbjct: 374 PDIVLWTSMIGGYVQNGENEDALSLYGR-MEMEGILPNELTMASVLKACSSLAALEQGKQ 432
Query: 414 IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH 473
IHA ++ G ++ + S L MY+KCG + ++F+ RD++ +N MI+ + +G
Sbjct: 433 IHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGC 492
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA 533
++A+ LFEEM +G KPD VTFV ILSA H G VE G YF M ++ + P +HYA
Sbjct: 493 GKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYA 552
Query: 534 CMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGN 593
CM+D+ RA +L++AIEF +S + + L CR RN EL A EKL+ L
Sbjct: 553 CMVDILSRAGKLKEAIEFTESATIDHGMCLWRIILGACRNYRNYELGAYAGEKLMELGSQ 612
Query: 594 NKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPK 653
+ YV L+++Y+A G W ++ R+R+ M+ ++ GCSW+ ++ +H+F V D HP+
Sbjct: 613 ESSAYVLLSSIYSALGRWEDVERVRRMMKLRGVSKEPGCSWIELKSGVHVFVVKDQMHPQ 672
Query: 654 TNAIY 658
I+
Sbjct: 673 IGDIH 677
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 116/505 (22%), Positives = 206/505 (40%), Gaps = 109/505 (21%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A+K GL N L+ +Y+K L ++ + F+ ++N +W+ +I+ +S D
Sbjct: 232 HCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDS 291
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+ ALKLF M + IR EFT +
Sbjct: 292 DK--------------------------------ALKLFSSMHLSG--IRPSEFTFVGVI 317
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
N C L G+Q+H +++K ++ + +++L+DMY+KC +A + F+
Sbjct: 318 NACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFD-------- 369
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+ ++P D V W ++I GYVQNG+ E+ L L+ RM
Sbjct: 370 ----------------------YLQEP---DIVLWTSMIGGYVQNGENEDALSLYGRMEM 404
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G+ NE T AS L AC L ++ K+IH+ +K G + S + +Y KC
Sbjct: 405 EGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKC----- 459
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G +++ F + ++V+ W A+ SG +
Sbjct: 460 --------------------------GCLKDGTLVFRRMPARDVISWNAMISGLSQNGCG 493
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ--MDKKL- 429
+ +L E + EG D + V +L AC+ + G Y M + MD ++
Sbjct: 494 KEALELFEE-MQLEGTKPDYVTFVNILSACSHMGLVERG---WGYFRMMFDEFGMDPRVE 549
Query: 430 -ISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
+ +VD+ S+ G + A E I+ + L+ +++ ++ + E E+++E
Sbjct: 550 HYACMVDILSRAGKLKEAIEFTESATIDHGMCLWRIILGACRNYRNYELGAYAGEKLMEL 609
Query: 488 GIKPDA--VTFVAILSAFRHCGSVE 510
G + + V +I SA VE
Sbjct: 610 GSQESSAYVLLSSIYSALGRWEDVE 634
Score = 45.8 bits (107), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L++ H + +K G L + L +Y+K L++ +F MP R+V SWN +IS
Sbjct: 427 LEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISG 486
Query: 66 CIKSHDLKQARSLFD----SSPHKDLVTYNSML 94
++ K+A LF+ D VT+ ++L
Sbjct: 487 LSQNGCGKEALELFEEMQLEGTKPDYVTFVNIL 519
>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
Length = 862
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 194/618 (31%), Positives = 311/618 (50%), Gaps = 68/618 (11%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
E+ V NT++S K L A LF+ P DLVT+N M+ G + G +AL LF
Sbjct: 274 EQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQ-NGLLDEALGLFC 332
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
+M + R D T+ S L L + G+++H ++++ F VS+L+D+Y K
Sbjct: 333 DMLRSGA--RPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFK 390
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
CR A + + D V +T+IS
Sbjct: 391 CRDVRTA---------------------------------RNLYDAARAIDVVIGSTVIS 417
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
GYV NG +E+ L++F + E ++ N T AS L AC + + +EIH +VL+N
Sbjct: 418 GYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEG 477
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
+V S ++D+Y KC G ++ + F ++
Sbjct: 478 KCYVESALMDMYAKC-------------------------------GRLDLSHYIFSKMS 506
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
K+ V W ++ S + + + DL + EG+ + + + L ACA A++ GK
Sbjct: 507 LKDEVTWNSMISSFSQNGEPQEALDLFRQMCM-EGIKYNNVTISSALSACASLPAIYYGK 565
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
EIH I++ ++ D S L+DMY+KCGNM A +F+ +++ V +N +I+ Y HG
Sbjct: 566 EIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISAYGAHG 625
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
++++ M E+G KPD VTF+A++SA H G VE G + F MT +Y I+P +H+
Sbjct: 626 LVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIAPRMEHF 685
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
ACM+DLY R+ +L+KAI+F+ +P + DA I G+ L+ CR++RN ELA A ++L +L+
Sbjct: 686 ACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFKLDP 745
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
N YV ++N+ A G W + ++R+ M+ K + G SWV V + H+F D SHP
Sbjct: 746 GNSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFVASDKSHP 805
Query: 653 KTNAIYSVLAIFTGELYE 670
++ IY+ L EL E
Sbjct: 806 ESEDIYTSLKALLQELRE 823
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 138/489 (28%), Positives = 234/489 (47%), Gaps = 69/489 (14%)
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
L+ AR FD P +D V +N M+ GYI A G A++LF M+ + + T+
Sbjct: 192 LRDARDAFDGMPWRDCVLWNVMMDGYIKA-GDVGGAVRLFRNMRVSG--CEPNFATLACF 248
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L++C ++ G QLH+ VK + ++L+ MY+KCRC ++A R+FE
Sbjct: 249 LSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFE------- 301
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
L+ ++ D V+WN +ISG VQNG +E L LF M
Sbjct: 302 LLPRD--------------------------DLVTWNGMISGCVQNGLLDEALGLFCDML 335
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
+G R + T S L A L +K KE+H ++++N + + F+ S +VD+Y KC ++
Sbjct: 336 RSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVR 395
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
A N+ +A R D VV+ + + SGYV
Sbjct: 396 TAR-------------------------NLYDAARAID------VVIGSTVISGYVLNGM 424
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
E + ++ ++ + +A+ + +L ACA +AL G+EIH Y+LR + + S
Sbjct: 425 SEKALQMF-RYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVES 483
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
L+DMY+KCG + + IF +D V +N MI+ ++ +G ++A+ LF +M +GIK
Sbjct: 484 ALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKY 543
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
+ VT + LSA ++ G K + + I + + +ID+Y + +E A+
Sbjct: 544 NNVTISSALSACASLPAIYYG-KEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRV 602
Query: 552 MKSIPTEED 560
+ +P + +
Sbjct: 603 FEFMPDKNE 611
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/446 (25%), Positives = 194/446 (43%), Gaps = 69/446 (15%)
Query: 72 LKQARSLFDSSPHK---DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
+ A ++F + P + +N ++ G+ A G+ + A+ +++M + D T+
Sbjct: 86 FRDAVAVFSALPRAAAGSSLPWNWLIRGF-TAAGHHSLAVLFYVKMWTHPAAPSPDAHTL 144
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE 188
+ C L V GR +H T + + S+LI MYS +A F+G
Sbjct: 145 PYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMP- 203
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
WR D V WN ++ GY++ GD ++LF
Sbjct: 204 ---------------------------WR-----DCVLWNVMMDGYIKAGDVGGAVRLFR 231
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
M +G N T A LS C ++ ++HS +K GL V++ ++ +Y KC
Sbjct: 232 NMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCR 291
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
+ ++A R F+ L ++V W + SG V+
Sbjct: 292 CL-------------------------------DDAWRLFELLPRDDLVTWNGMISGCVQ 320
Query: 369 AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK 428
+ L + + + G D++ LV LL A L GKE+H YI+R V MD
Sbjct: 321 NGLLDEALGLFCDML-RSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAF 379
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
L+S LVD+Y KC ++ A ++ D+V+ + +I+ Y +G EKA+ +F +LE+
Sbjct: 380 LVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQC 439
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEK 514
IKP+AVT ++L A ++ +G++
Sbjct: 440 IKPNAVTVASVLPACASISALPLGQE 465
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 131/556 (23%), Positives = 241/556 (43%), Gaps = 112/556 (20%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L EAL +++G ++T L+ + N L++ +++ + V ++SA
Sbjct: 324 LDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSA 383
Query: 66 CI----KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+ K D++ AR+L+D++ D+V ++++ GY+ G AL++F + ++ I
Sbjct: 384 LVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYV-LNGMSEKALQMFRYL--LEQCI 440
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+ + TV S L C + + G+++H ++++ + + + S+L+DMY+KC
Sbjct: 441 KPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKC-------- 492
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
G ++++ F + L D V+WN++IS + QNG+ +
Sbjct: 493 ------------------------GRLDLSHYIFSKM-SLKDEVTWNSMISSFSQNGEPQ 527
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E L LF +M G+++N T +SALSAC L + KEIH ++K + ++ F S ++
Sbjct: 528 EALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALI 587
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D+Y KC NM E A R F+ + +KN V W +
Sbjct: 588 DMYAKCGNM-------------------------------ELALRVFEFMPDKNEVSWNS 616
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+ S Y + L + +EG D + + L+ ACA HA ++
Sbjct: 617 IISAYGAHGLVKESVSFLHR-MQEEGYKPDHVTFLALISACA-----------HAGLVEE 664
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
G+Q+ +C Y I + + M+ Y+ G +KAI
Sbjct: 665 GLQL------------FQCMTKEY-------LIAPRMEHFACMVDLYSRSGRLDKAIQFI 705
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID---- 537
+M KPDA + A+L A R +VE+ + + +K+ P Y ++
Sbjct: 706 ADM---PFKPDAGIWGALLHACRVHRNVELADIASQEL---FKLDPGNSGYYVLMSNINA 759
Query: 538 LYGRANQLEKAIEFMK 553
+ GR + + K MK
Sbjct: 760 VAGRWDGVSKVRRLMK 775
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 103/256 (40%), Gaps = 7/256 (2%)
Query: 324 NSFSISSMIVG-YSLQGNMEEARRHFDSLTEK---NVVVWTALFSGYVKA-QNCEALFDL 378
N ++ + ++G Y L +A F +L + + W L G+ A + A+
Sbjct: 68 NHLALHTRLLGMYVLARRFRDAVAVFSALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFY 127
Query: 379 LSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYS 438
+ + DA L ++ +CA A+ G+ +H G+ D + S L+ MYS
Sbjct: 128 VKMWTHPAAPSPDAHTLPYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYS 187
Query: 439 KCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVA 498
G + A F RD VL+NVM+ Y G A+ LF M G +P+ T
Sbjct: 188 DAGLLRDARDAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLAC 247
Query: 499 ILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE 558
LS + G + +S+ + E ++ +Y + L+ A + +P
Sbjct: 248 FLSVCAAEADLLSGVQ-LHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLP-R 305
Query: 559 EDAVILGSFLNVCRLN 574
+D V ++ C N
Sbjct: 306 DDLVTWNGMISGCVQN 321
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 200/651 (30%), Positives = 315/651 (48%), Gaps = 68/651 (10%)
Query: 13 HVQAIKAGLTLTTITTNQLIHI--YSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSH 70
H ++ GL + +L S + L + K+FD++P N+++WNT+I A
Sbjct: 50 HAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIPRPNLYTWNTLIRA----- 104
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
F SSP L +FI+M + + +T
Sbjct: 105 --------FASSPKP-------------------IQGLLVFIQMLHESQRFP-NSYTFPF 136
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
+ ++ ++ G+ +H ++K S + F +SLI YS + A VF E+
Sbjct: 137 VIKAATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEK- 195
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
D VSWN++ISG+VQ G EE L+LF RM
Sbjct: 196 --------------------------------DIVSWNSMISGFVQGGSPEEALQLFKRM 223
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
R N T LSAC +++ + ++ +NG+ N +S+ ++D+Y KC ++
Sbjct: 224 KMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSL 283
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
A + ++ S ++MI GY+ G+ + ARR FD + +++ W AL S Y +
Sbjct: 284 EDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNG 343
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
+ + E + + + L L ACA A+ G IH YI + G++++ +
Sbjct: 344 KPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHIT 403
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
++L+DMYSKCG++ A +F + RD+ +++ MIA A HGH AI LF +M E +K
Sbjct: 404 TSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVK 463
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
P+AVTF +L A H G V+ G +FN M Y + P + HYACM+D+ GRA LE+A+E
Sbjct: 464 PNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVE 523
Query: 551 FMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGN 610
++ +P A + G+ L CR+ N ELA A +LL + NN YV L+N+YA G
Sbjct: 524 LIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLETDSNNHGAYVLLSNIYAKAGK 583
Query: 611 WAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
W + R+R+ M+ + GCS + V IH F VGD SHP + IYS L
Sbjct: 584 WDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDNSHPLSTEIYSKL 634
>gi|357504423|ref|XP_003622500.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497515|gb|AES78718.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 655
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 203/671 (30%), Positives = 320/671 (47%), Gaps = 97/671 (14%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L E H IK G NQ++ +Y K +++KLF+E+P RNV SWN +I A
Sbjct: 76 LPEGKQLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEELPVRNVVSWNIMIRA 135
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLC-GYINAEGYEADALKLFIEMQSADEHIRMD 124
+ +D ++ + LC Y ++ +EM D HI
Sbjct: 136 SVGRNDENESSGM--------------RLCFSYFR---------RMLLEMMVPD-HI--- 168
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
T + LC + ++ G QLH F VK D F +L+ +Y+KC E A RVF
Sbjct: 169 --TFNGLICLCTQFNDIEMGVQLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVF- 225
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
CR D V WN ++S YV N EE
Sbjct: 226 --------------CDVSCR------------------DLVMWNVMVSCYVFNSLPEEAF 253
Query: 245 KLFVRMGENGVRWNEHTFASALSACC--GLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
++F M + V +E TF+S LS L K++HS VL+ S+ V+S +++
Sbjct: 254 RVFNSMRLDVVNGDEFTFSSLLSVISDDALEYYDFGKQVHSLVLRQSFDSDVLVASALIN 313
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
+Y K EN+ +ARR FD ++ +NVV W +
Sbjct: 314 MYAKSENI-------------------------------IDARRVFDEMSIRNVVAWNTM 342
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
G+ + + L+ E + +EG + D L + ++ +C +A+ ++HA+ +++
Sbjct: 343 IVGFGNHGDGNEVMKLVKEML-REGFLPDELTISSIISSCGYASAITETLQVHAFAVKLS 401
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
Q + ++L+ YSKCG++T A F+ + DLV + +I YA HG EK+ +FE
Sbjct: 402 CQDFLSVANSLISAYSKCGSITSAFKCFELTSQPDLVTWTSLIYAYAFHGLAEKSTEMFE 461
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRA 542
+ML GIKPD + F+ +LSA HCG V G YF MT Y+I P+++HY C++DL GR
Sbjct: 462 KMLSYGIKPDRIAFLGVLSACAHCGLVTKGLHYFKLMTNAYQIVPDSEHYTCLVDLLGRY 521
Query: 543 NQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLA 602
+ +A E ++S+P E D+ LG+F+ C+L+ N ELA A EKL +E Y ++
Sbjct: 522 GLINEAFEILRSMPIEVDSDTLGAFIGSCKLHSNMELAKLAAEKLFLIEPEKSVNYAVMS 581
Query: 603 NVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLA 662
N++A++ +W ++ RIRK M + + GCSW+ + ++IH F D SHP +Y L
Sbjct: 582 NIFASQKHWYDVERIRKTMEDKRDAKVPGCSWIEIGNQIHSFVSNDKSHPNALEMYVTLN 641
Query: 663 IFTGELYEIAG 673
+ + E G
Sbjct: 642 MLLRPMKEQNG 652
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 56/120 (46%), Gaps = 6/120 (5%)
Query: 399 LGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDL 458
L A + L GK++HA++++ G L + ++ +Y KC A+ +F+ R++
Sbjct: 67 LKISAKKGYLPEGKQLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEELPVRNV 126
Query: 459 VLYNVMIACYAHHGHEEKA------ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMG 512
V +N+MI E ++ F ML + + PD +TF ++ +EMG
Sbjct: 127 VSWNIMIRASVGRNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQFNDIEMG 186
>gi|225432514|ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial [Vitis vinifera]
Length = 694
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 199/634 (31%), Positives = 320/634 (50%), Gaps = 8/634 (1%)
Query: 4 LNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
L L + H K+GL N LI Y K L+ +R LFD + S N ++
Sbjct: 66 LALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFDTCSVLDPVSCNIML 125
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
+ +KS L AR LF+ P K V+Y +M+ G + +A+ +F +M+ A +
Sbjct: 126 AGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCW-LEAIGVFKDMRFAG--VIP 182
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
+E T+ S ++ + + R LHA K +A ++L+ MY C A +F
Sbjct: 183 NEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYCVCSSLGNARVLF 242
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
+ E N+++ N M+ + G +++A F R P D VSW T+I GYVQ E
Sbjct: 243 DEIPER-NVVTWNVMLNGYSKSGLVDLARDLFERIPA-KDVVSWGTIIDGYVQIERLGEA 300
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
L+++ M GV NE +SAC V ++ H +++ G F+ + I+
Sbjct: 301 LRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHF 360
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y C +N A L + S +++I G+ G +E+AR+ FD + E++V W+++
Sbjct: 361 YAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMPERDVFSWSSMI 420
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
SGY + + + L E V GV + + +V + A A L G+ H YIL +
Sbjct: 421 SGYSQNEQPDLALQLFHEMVAG-GVQPNEITMVSVFSAIATLGTLMEGRWAHEYILSNSI 479
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER--DLVLYNVMIACYAHHGHEEKAILLF 481
++ L + L+DMY+KCG++T A +F +R + +N +I A HGH ++ LF
Sbjct: 480 PLNDNLNAALIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVSLKLF 539
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGR 541
++ IKP+++TF+ +LSA H G V+ GEKYF M Y I P HY CMIDL GR
Sbjct: 540 SQLQRVRIKPNSITFIGVLSACCHAGLVDTGEKYFKGMKNLYNIEPNIKHYGCMIDLLGR 599
Query: 542 ANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQL 601
A +L++A E ++ +P + D VI G+ L CR + N E+ A E L +L+ ++ A V L
Sbjct: 600 AGRLKEAAEMIRKMPMKADVVIWGTLLAACRTHGNVEIGERAAENLAKLDISHGAGRVLL 659
Query: 602 ANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWV 635
+N+YA G W + +R+ M+ + + GCS V
Sbjct: 660 SNIYADAGRWDDAFLVRRAMQSQRMKKSPGCSGV 693
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 127/492 (25%), Positives = 230/492 (46%), Gaps = 38/492 (7%)
Query: 103 YEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFA 162
+ D L+ F +H E T+ S L C LL + G+Q+H+ + K+ ++ F
Sbjct: 31 HPIDHLRAFFNGNKDTQHSDY-ELTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFV 89
Query: 163 VSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN 222
+SLI Y KCR A +F+ C+ ++ +S N M+A + G ++ A F + P +
Sbjct: 90 KNSLISFYVKCRLISNARSLFDTCS-VLDPVSCNIMLAGYVKSGSLDNARHLFEKMP-IK 147
Query: 223 DAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIH 282
VS+ T++ G QN E + +F M GV NE T AS +SA + + + +H
Sbjct: 148 GCVSYTTMVMGLAQNNCWLEAIGVFKDMRFAGVIPNEVTLASVISAYSHVGGILNCRMLH 207
Query: 283 SWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNME 342
+ K GL + V++ +V +YC C ++ A + RN + + M+ GYS G ++
Sbjct: 208 ALSFKLGLEALNIVATNLVHMYCVCSSLGNARVLFDEIPERNVVTWNVMLNGYSKSGLVD 267
Query: 343 EARRHFDSLTEKNVVVWTALFSGYVKAQNC-EALFDLLSEFVTKEGVVTDALILVILLGA 401
AR F+ + K+VV W + GYV+ + EAL + + + GV + +++V L+ A
Sbjct: 268 LARDLFERIPAKDVVSWGTIIDGYVQIERLGEAL--RMYRSMLRTGVGPNEVMIVDLISA 325
Query: 402 CALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEI------------- 448
C A+ G++ H I+R G + +T++ Y+ CG + A +
Sbjct: 326 CGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFYAACGEINLAFLQFELGSKDHVSSW 385
Query: 449 ------------------IFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+F ERD+ ++ MI+ Y+ + + A+ LF EM+ G++
Sbjct: 386 NALISGFVRNGMIEQARQLFDEMPERDVFSWSSMISGYSQNEQPDLALQLFHEMVAGGVQ 445
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
P+ +T V++ SA G++ G ++ + I + A +ID+Y + + A++
Sbjct: 446 PNEITMVSVFSAIATLGTLMEG-RWAHEYILSNSIPLNDNLNAALIDMYAKCGSITIALQ 504
Query: 551 FMKSIPTEEDAV 562
I +V
Sbjct: 505 LFYEIQDRVSSV 516
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 123/270 (45%), Gaps = 36/270 (13%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R++ + E H ++ G +IH Y+ + + F+ + +V SWN
Sbjct: 328 RTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFYAACGEINLAFLQFELGSKDHVSSWNA 387
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+IS +++ ++QAR LFD P +D+ +++SM+ GY E + AL+LF EM + +
Sbjct: 388 LISGFVRNGMIEQARQLFDEMPERDVFSWSSMISGYSQNEQPDL-ALQLFHEMVAGG--V 444
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+ +E T+ S + L + GR H +++ S + ++LIDMY+KC
Sbjct: 445 QPNEITMVSVFSAIATLGTLMEGRWAHEYILSNSIPLNDNLNAALIDMYAKC-------- 496
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWR-QPELNDAVSWNTLISGYVQNGDA 240
G + +AL+ F+ Q ++ WN +I G +G A
Sbjct: 497 ------------------------GSITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHA 532
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACC 270
LKLF ++ ++ N TF LSACC
Sbjct: 533 NVSLKLFSQLQRVRIKPNSITFIGVLSACC 562
>gi|15223562|ref|NP_176050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173051|sp|Q9FXA9.1|PPR83_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g56570
gi|9954755|gb|AAG09106.1|AC009323_17 Hypothetical protein [Arabidopsis thaliana]
gi|332195289|gb|AEE33410.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 611
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 188/622 (30%), Positives = 322/622 (51%), Gaps = 72/622 (11%)
Query: 52 PERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLF 111
P+++ +I + + +++ARSLFD P +D+V + +M+ GY ++ Y A A + F
Sbjct: 41 PKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSN-YNARAWECF 99
Query: 112 IEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYS 171
EM + +EFT++S L C + + +G +H +VK + S + +++++MY+
Sbjct: 100 HEM--VKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYA 157
Query: 172 KCRC-YEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTL 230
C E AC +F R ++ + V+W TL
Sbjct: 158 TCSVTMEAACLIF---------------------------------RDIKVKNDVTWTTL 184
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL 290
I+G+ GD GLK++ +M + A+ A + +V K+IH+ V+K G
Sbjct: 185 ITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGF 244
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
SN V + I+D+YC+C G + EA+ +F
Sbjct: 245 QSNLPVMNSILDLYCRC-------------------------------GYLSEAKHYFHE 273
Query: 351 LTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHP 410
+ +K+++ W L S ++ + EAL L+ + +G V + L+ ACA AAL+
Sbjct: 274 MEDKDLITWNTLISELERSDSSEAL--LMFQRFESQGFVPNCYTFTSLVAACANIAALNC 331
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER-DLVLYNVMIACYA 469
G+++H I R G + +L + L+DMY+KCGN+ ++ +F ++R +LV + M+ Y
Sbjct: 332 GQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYG 391
Query: 470 HHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPET 529
HG+ +A+ LF++M+ GI+PD + F+A+LSA RH G VE G KYFN M ++Y I+P+
Sbjct: 392 SHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDR 451
Query: 530 DHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNR-NAELAGEAEEKLL 588
D Y C++DL GRA ++ +A E ++ +P + D G+ L C+ ++ N ++ A K++
Sbjct: 452 DIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVM 511
Query: 589 RLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGD 648
L+ YV L+ +YAAEG W + R+RK MR M + AG SW+ VE+++ F V D
Sbjct: 512 ELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSD 571
Query: 649 VSHPKTNAIYSVLAIFTGELYE 670
P +++YSVL + E E
Sbjct: 572 KMCPNASSVYSVLGLLIEETRE 593
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 112/258 (43%), Gaps = 47/258 (18%)
Query: 12 CHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHD 71
C A++A ++ ++TT + IH + + N+ N+I+ +
Sbjct: 215 CITIAVRASASIDSVTTGKQIHA-----------SVIKRGFQSNLPVMNSILDLYCRCGY 263
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
L +A+ F KDL+T+N+++ ++ EA L +F +S + + +T TS
Sbjct: 264 LSEAKHYFHEMEDKDLITWNTLISELERSDSSEA--LLMFQRFES--QGFVPNCYTFTSL 319
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
+ C + + G+QLH + + + + ++LIDMY+KC ++ RVF + N
Sbjct: 320 VAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRN 379
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
L VSW +++ GY +G E ++LF +M
Sbjct: 380 L--------------------------------VSWTSMMIGYGSHGYGAEAVELFDKMV 407
Query: 252 ENGVRWNEHTFASALSAC 269
+G+R + F + LSAC
Sbjct: 408 SSGIRPDRIVFMAVLSAC 425
>gi|297824945|ref|XP_002880355.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297326194|gb|EFH56614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 599
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 188/547 (34%), Positives = 304/547 (55%), Gaps = 9/547 (1%)
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS-LIDMYSKCRCYEEA 179
IR+ + S L C ++ G+ +H + T +S+ LI MY KC +A
Sbjct: 42 IRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDA 101
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
C+VF+ NL S N MV+ + G + A F PE D VSWNT++ GY Q+G+
Sbjct: 102 CKVFDQMHLR-NLYSWNNMVSGFVKSGMLVRARVVFDSMPE-RDVVSWNTMVIGYAQDGN 159
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
E L F + +G+++NE +FA L+AC R ++ ++ H VL G +SN +S
Sbjct: 160 LHEALWFFKELRRSGIKFNEFSFAGLLTACVKSRQLQLNQQAHGQVLVAGFLSNVVLSCS 219
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
I+D Y KC M A+ V++ +++I GY+ G+ME A + F + EKN V W
Sbjct: 220 IIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAADKLFREMPEKNPVSW 279
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
TAL +GYV+ + + DL + + V + L A A A+L GK+IH Y++
Sbjct: 280 TALIAGYVRQGSGDLALDLFRKMIAMR-VKPEQFTFSSCLCASASIASLRHGKQIHGYMI 338
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQ-NFIERDLVLYNVMIACYAHHGHEEKAI 478
R V+ + + S+L+DMYSK G++ +E +F+ + ++D VL+N MI+ A HG KA+
Sbjct: 339 RTNVRPNAIVTSSLIDMYSKSGSLEASERVFRICYDKQDCVLWNTMISALAQHGLGHKAL 398
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
+ ++M++ + P+ T V IL+A H G VE G ++F SMT + I P+ +HYAC+IDL
Sbjct: 399 QMLDDMIKFRVHPNRTTLVVILNACSHSGLVEEGVRWFESMTVQHGIVPDQEHYACLIDL 458
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARY 598
GRA ++ + ++ +P E D I + L VCR++ N EL +A E+L++L+ + A Y
Sbjct: 459 LGRAGCFKELMSKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAAEELIKLDPESSAPY 518
Query: 599 VQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNA-- 656
+ L+++YA G W + ++R M+ + N+ SW+ +E+++ FTV D SH +A
Sbjct: 519 ILLSSIYADHGKWELVEKLRGIMKKRRVNKEKAVSWIEIENKVKAFTVSDGSHAHAHARK 578
Query: 657 --IYSVL 661
IY +L
Sbjct: 579 EEIYFIL 585
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 132/497 (26%), Positives = 247/497 (49%), Gaps = 49/497 (9%)
Query: 25 TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPH 84
T+ +N LI +Y K ++ K+FD+M RN++SWN ++S +KS L +AR +FDS P
Sbjct: 82 TLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGFVKSGMLVRARVVFDSMPE 141
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
+D+V++N+M+ GY +G +AL F E++ + I+ +EF+ L CVK +
Sbjct: 142 RDVVSWNTMVIGYAQ-DGNLHEALWFFKELRRSG--IKFNEFSFAGLLTACVKSRQLQLN 198
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT-EEVNLISKNAMVAACC 203
+Q H ++ ++ S+ID Y+KC E A R F+ T +++++ + +++
Sbjct: 199 QQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWT--TLISGYA 256
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
+ G+ME A K F PE N VSW LI+GYV+ G + L LF +M V+ + TF+
Sbjct: 257 KLGDMEAADKLFREMPEKN-PVSWTALIAGYVRQGSGDLALDLFRKMIAMRVKPEQFTFS 315
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
S L A + +++ K+IH ++++ + N V+S ++D+Y K
Sbjct: 316 SCLCASASIASLRHGKQIHGYMIRTNVRPNAIVTSSLIDMYSK----------------- 358
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEK-NVVVWTALFSGYVKAQNCEALFDLLSEF 382
G++E + R F +K + V+W + S + +L +
Sbjct: 359 --------------SGSLEASERVFRICYDKQDCVLWNTMISALAQHGLGHKALQMLDDM 404
Query: 383 VTKEGVVTDALILVILLGACALQAALHPG-KEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
+ K V + LV++L AC+ + G + + ++ G+ D++ + L+D+ + G
Sbjct: 405 I-KFRVHPNRTTLVVILNACSHSGLVEEGVRWFESMTVQHGIVPDQEHYACLIDLLGRAG 463
Query: 442 NMTYAEI---IFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD-AVTFV 497
+ E+ I + E D ++N ++ HG+EE EE+++ + P+ + ++
Sbjct: 464 --CFKELMSKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAAEELIK--LDPESSAPYI 519
Query: 498 AILSAFRHCGSVEMGEK 514
+ S + G E+ EK
Sbjct: 520 LLSSIYADHGKWELVEK 536
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 139/301 (46%), Gaps = 7/301 (2%)
Query: 229 TLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKN 288
+L+S + + + + + + G+R AS L C +++K K IH +
Sbjct: 16 SLLSRHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKIT 75
Query: 289 GLI-SNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRH 347
G N +S+ ++ +Y KC A + +RN +S ++M+ G+ G + AR
Sbjct: 76 GFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGFVKSGMLVRARVV 135
Query: 348 FDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAA 407
FDS+ E++VV W + GY + N E + + G+ + LL AC
Sbjct: 136 FDSMPERDVVSWNTMVIGYAQDGNLHEALWFFKE-LRRSGIKFNEFSFAGLLTACVKSRQ 194
Query: 408 LHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIAC 467
L ++ H +L G + L +++D Y+KCG M A+ F +D+ ++ +I+
Sbjct: 195 LQLNQQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISG 254
Query: 468 YAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISP 527
YA G E A LF EM EK + V++ A+++ + GS ++ F M A ++ P
Sbjct: 255 YAKLGDMEAADKLFREMPEK----NPVSWTALIAGYVRQGSGDLALDLFRKMIA-MRVKP 309
Query: 528 E 528
E
Sbjct: 310 E 310
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 125/268 (46%), Gaps = 37/268 (13%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R L L + H Q + AG + + +I Y+K + +++ FDEM +++ W T
Sbjct: 193 RQLQLNQQ--AHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTT 250
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+IS K D++ A LF P K+ V++ +++ GY+ +G AL LF +M + +
Sbjct: 251 LISGYAKLGDMEAADKLFREMPEKNPVSWTALIAGYVR-QGSGDLALDLFRKMIAM--RV 307
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+ ++FT +S L + ++ G+Q+H +M++T+ + SSLIDMYSK E + R
Sbjct: 308 KPEQFTFSSCLCASASIASLRHGKQIHGYMIRTNVRPNAIVTSSLIDMYSKSGSLEASER 367
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
VF C ++ D V WNT+IS Q+G
Sbjct: 368 VFRICYDK--------------------------------QDCVLWNTMISALAQHGLGH 395
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSAC 269
+ L++ M + V N T L+AC
Sbjct: 396 KALQMLDDMIKFRVHPNRTTLVVILNAC 423
>gi|147836314|emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]
Length = 768
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 206/715 (28%), Positives = 348/715 (48%), Gaps = 110/715 (15%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
I+TN I Y+K + L +R+LFD+MP+R V SWNT+IS+ K
Sbjct: 73 ISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSK----------------- 115
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR 145
G ++AL L M + H+++ E T +S L++C +L + G+
Sbjct: 116 ---------------HGRFSEALFLVYSMHRS--HMKLSESTFSSVLSVCARLRCLRDGK 158
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
+H ++K+ +++ S+L+ Y+ C EA RVF+ N + + M+
Sbjct: 159 LIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRVFDVLVRR-NEVLWSLMLVGYVTC 217
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD----AEEGLKLFVRMGENGVRWNEHT 261
M+ AL F + P D V+W TLISG+ +NGD A E +L +R GE NE T
Sbjct: 218 NVMDDALSVFVKMPR-RDVVAWTTLISGFSKNGDGCGKALEMFRLMMRSGETTP--NEFT 274
Query: 262 FASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA-------- 313
F + AC L + + +H ++K GL +P + +V+ YC+CE ++ A
Sbjct: 275 FDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVV 334
Query: 314 ---------------------ESMLLLKGVR--NSFSISSMIVGYSLQGNMEEARRHFDS 350
++ L+ G+ N S + MI GY++ G M++++R F+
Sbjct: 335 NPCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVGGQMDDSKRLFEK 394
Query: 351 LT--------------------------------EKNVVVWTALFSGYVKAQNCEALFDL 378
+ EK+ V W ++ SGY+ + E L
Sbjct: 395 MPCRTIFSSNTMISVYSRNGEIDKALELFEETKNEKDPVTWNSMISGYIHSGQPEEALKL 454
Query: 379 LSEFVT--KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDM 436
++T + + L AC+ +L G+ +HA++++ + + + ++L+DM
Sbjct: 455 ---YITMHRLSIQQTRSTFSALFHACSCLGSLQQGQLLHAHLIKTPFESNVYVGTSLIDM 511
Query: 437 YSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTF 496
YSKCG++ A+ F + ++ + +I +A+HG +AI LF+ M+E+G+ P+ TF
Sbjct: 512 YSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDXMIEQGLAPNGATF 571
Query: 497 VAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIP 556
V +LSA G V G K F+SM Y ++P +HYAC++DL GR+ + +A EF+K +P
Sbjct: 572 VGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHIREAEEFIKKMP 631
Query: 557 TEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGR 616
E D V+ G+ L+ C + E+ EK+ + + YV L+N+YA G W E
Sbjct: 632 LEADGVVWGALLSACWFWMDLEVGERVAEKMFSFDPKPISSYVILSNIYAGLGRWREKMM 691
Query: 617 IRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEI 671
+RK +RG K + GCSW+ + ++IH+F++ D SHP N IY+ L T + +
Sbjct: 692 VRKILRGFKVKKDPGCSWIELNNKIHVFSIEDRSHPYCNMIYATLEHLTANINSV 746
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/530 (22%), Positives = 226/530 (42%), Gaps = 103/530 (19%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L++ + H +K+G + + L++ Y+ + E+R++FD + RN W+ ++
Sbjct: 154 LRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRVFDVLVRRNEVLWSLMLVG 213
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
+ + + A S+F P +D+V + +++ G+ AL++F M + E +E
Sbjct: 214 YVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDGCGKALEMFRLMMRSGETTP-NE 272
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
FT + C +L + GR +H ++K + +L++ Y +C ++A RV +G
Sbjct: 273 FTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKG 332
Query: 186 CTE------------------------------EVNLISKN------------------- 196
E+N +S N
Sbjct: 333 VVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVGGQMDDSKRLF 392
Query: 197 ------------AMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
M++ R GE++ AL+ F D V+WN++ISGY+ +G EE L
Sbjct: 393 EKMPCRTIFSSNTMISVYSRNGEIDKALELFEETKNEKDPVTWNSMISGYIHSGQPEEAL 452
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
KL++ M ++ TF++ AC L +++ + +H+ ++K SN +V + ++D+Y
Sbjct: 453 KLYITMHRLSIQQTRSTFSALFHACSCLGSLQQGQLLHAHLIKTPFESNVYVGTSLIDMY 512
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
KC G++ EA+ F S+ NV WTAL +
Sbjct: 513 SKC-------------------------------GSIMEAQTSFVSIFSPNVAAWTALIN 541
Query: 365 GYVK---AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR- 420
G+ +LFD + E +G+ + V +L AC+ ++ G +I + R
Sbjct: 542 GHAYHGLGSEAISLFDXMIE----QGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERC 597
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMI-ACY 468
V + + +VD+ + G++ A E I + +E D V++ ++ AC+
Sbjct: 598 YSVTPTLEHYACVVDLLGRSGHIREAEEFIKKMPLEADGVVWGALLSACW 647
>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 202/608 (33%), Positives = 305/608 (50%), Gaps = 70/608 (11%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
E +VF +++I ++ + AR LFD P KD V +N ML GY+ ++ +A +F+
Sbjct: 179 ELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWD-NATGVFM 237
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTS--NDASGFAVSSLIDMY 170
EM+ + + + T L++C + + FG QLH +V + D+ +LID+Y
Sbjct: 238 EMRRTETNP--NSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIY 295
Query: 171 SKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTL 230
KCR ++EMA K F ++ + D V +
Sbjct: 296 FKCR--------------------------------DVEMARKIFDQRTPV-DIVVCTAM 322
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL 290
ISGYV NG L++F + + +R N T AS L AC GL + KE+H +LKNG
Sbjct: 323 ISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGH 382
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
+ +V S I+D+Y KC G ++ A + F
Sbjct: 383 GGSCYVGSAIMDMYAKC-------------------------------GRLDLAHQTFIG 411
Query: 351 LTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHP 410
+++K+ V W ++ + + E DL + + G D + + L ACA ALH
Sbjct: 412 ISDKDAVCWNSMITSCSQNGKPEEAIDLFRQ-MGMAGTKYDCVSISAALSACANLPALHY 470
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
GKEIHA+++R + D S L+DMYSKCGN+ A +F E++ V +N +IA Y +
Sbjct: 471 GKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGN 530
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD 530
HG + ++ LF ML GI+PD VTF+AI+SA H G V+ G YF MT + I +
Sbjct: 531 HGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARME 590
Query: 531 HYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRL 590
HYACM+DL+GRA +L +A + S+P DA + G+ L CRL+ N ELA A L L
Sbjct: 591 HYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDL 650
Query: 591 EGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVS 650
+ N YV L+NV+A G W + +IR M+ + GCSW+ V + H+F D S
Sbjct: 651 DPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFVAADRS 710
Query: 651 HPKTNAIY 658
HP+++ IY
Sbjct: 711 HPQSSQIY 718
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 124/464 (26%), Positives = 206/464 (44%), Gaps = 77/464 (16%)
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
D++T + C L +V GR +H + + F SSLI YS+ C +A +F
Sbjct: 146 DKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLF 205
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
+ R P D V WN +++GYV+NGD +
Sbjct: 206 D--------------------------------RMPS-KDGVLWNVMLNGYVKNGDWDNA 232
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL-ISNPFVSS-GIV 301
+F+ M N TFA LS C + ++H V+ +GL + +P ++ ++
Sbjct: 233 TGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALI 292
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D+Y KC ++E AR+ FD T ++VV TA
Sbjct: 293 DIYFKCR-------------------------------DVEMARKIFDQRTPVDIVVCTA 321
Query: 362 LFSGYV-KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
+ SGYV N AL + ++ +E + +++ L +L ACA AAL GKE+H +IL+
Sbjct: 322 MISGYVLNGMNNNAL--EIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILK 379
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
G + S ++DMY+KCG + A F ++D V +N MI + +G E+AI L
Sbjct: 380 NGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDL 439
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA--CMIDL 538
F +M G K D V+ A LSA + ++ G++ M + + +D +A +ID+
Sbjct: 440 FRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMM---RGAFRSDLFAESALIDM 496
Query: 539 YGRANQLEKAIEFMKSIPTEEDA---VILGSFLNVCRLNRNAEL 579
Y + L+ A ++ + + I+ ++ N RL + L
Sbjct: 497 YSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNL 540
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 125/606 (20%), Positives = 237/606 (39%), Gaps = 181/606 (29%)
Query: 20 GLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLF 79
G L + LI YS++ + ++R LFD MP ++ WN +++ +K+ D A +F
Sbjct: 177 GFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVF 236
Query: 80 ------DSSPH-------------KDLVTYNSMLCGYINAEGYEAD-------------- 106
+++P+ + ++ + S L G + + G E D
Sbjct: 237 MEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYF 296
Query: 107 -------ALKLFIEMQSAD-----------------------------EHIRMDEFTVTS 130
A K+F + D E +R + T+ S
Sbjct: 297 KCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLAS 356
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L C L + G++LH ++K + S + S+++DMY+KC + A + F G +++
Sbjct: 357 VLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDK- 415
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
+ + N+M+ +C QNG EE + LF +M
Sbjct: 416 DAVCWNSMITSCS--------------------------------QNGKPEEAIDLFRQM 443
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
G G +++ + ++ALSAC L + KEIH+++++ S+ F S ++D+Y KC
Sbjct: 444 GMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKC--- 500
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
GN++ A R FD++ EKN V W ++ + Y
Sbjct: 501 ----------------------------GNLDLACRVFDTMEEKNEVSWNSIIAAY---G 529
Query: 371 NCEALFDLLSEF--VTKEGVVTDALILVILLGACALQAALHPGKEIHAY---ILRMGVQM 425
N L D L+ F + +G+ D + + ++ AC + G IH + +G+
Sbjct: 530 NHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEG--IHYFRCMTEELGIMA 587
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
+ + +VD++ + G + A F +
Sbjct: 588 RMEHYACMVDLFGRAGRLNEA----------------------------------FGMIN 613
Query: 486 EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE-TDHYACMIDLYGRANQ 544
PDA + +L A R G+VE+ E ++ + + P+ + +Y + +++ A Q
Sbjct: 614 SMPFSPDAGVWGTLLGACRLHGNVELAEVASRNL---FDLDPQNSGYYVLLSNVHANAGQ 670
Query: 545 LEKAIE 550
E ++
Sbjct: 671 WESVLK 676
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/458 (23%), Positives = 190/458 (41%), Gaps = 75/458 (16%)
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
+ S L C + GRQ HA M+ +G + L+ MY C + +A +F
Sbjct: 49 LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIF---- 104
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
L+ + +P WN +I G+ G + L +
Sbjct: 105 ----------------------YQLRLWCSEP-------WNWMIRGFTMMGQFDFALLFY 135
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
+M G +++TF + AC GL +V + +H + G + FV
Sbjct: 136 FKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVG---------- 185
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
SS+I YS G + +AR FD + K+ V+W + +GYV
Sbjct: 186 ---------------------SSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYV 224
Query: 368 KA---QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
K N +F + T VT A +L + CA + ++ G ++H ++ G++
Sbjct: 225 KNGDWDNATGVFMEMRRTETNPNSVTFACVLSV----CASEIMINFGSQLHGLVVSSGLE 280
Query: 425 MDKKLIST--LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
MD + +T L+D+Y KC ++ A IF D+V+ MI+ Y +G A+ +F
Sbjct: 281 MDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFR 340
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRA 542
+L++ ++ ++VT ++L A ++ +G++ + + A M D+Y +
Sbjct: 341 WLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIM-DMYAKC 399
Query: 543 NQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELA 580
+L+ A + I +++DAV S + C N E A
Sbjct: 400 GRLDLAHQTFIGI-SDKDAVCWNSMITSCSQNGKPEEA 436
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 155/371 (41%), Gaps = 53/371 (14%)
Query: 262 FASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKG 321
S L C + ++ H+ +L NG+ N + + ++ +Y C A+++
Sbjct: 49 LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108
Query: 322 VRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSE 381
+ S + MI G+++ G + A LF Y K C
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFA----------------LLF--YFKMLGC--------- 141
Query: 382 FVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
G + D ++ AC ++ G+ +H I MG ++D + S+L+ YS+ G
Sbjct: 142 -----GTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENG 196
Query: 442 NMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
+ A +F +D VL+NVM+ Y +G + A +F EM P++VTF +LS
Sbjct: 197 CIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLS 256
Query: 502 A-----FRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE-FMKSI 555
+ GS G + + D SP + +A +ID+Y + +E A + F +
Sbjct: 257 VCASEIMINFGSQLHGLVVSSGLEMD---SPVANTFA-LIDIYFKCRDVEMARKIFDQRT 312
Query: 556 PTEE---DAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWA 612
P + A+I G LN +N NA E L+ +A V LA+V A A
Sbjct: 313 PVDIVVCTAMISGYVLN--GMNNNA-----LEIFRWLLQERMRANSVTLASVLPACAGLA 365
Query: 613 EMGRIRKQMRG 623
+ + K++ G
Sbjct: 366 AL-TLGKELHG 375
>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 193/645 (29%), Positives = 324/645 (50%), Gaps = 103/645 (15%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLV 88
L+ +Y K L+ + K+F MPERN ++W+T
Sbjct: 157 TSLVGMYCKAGLVEDGLKVFAYMPERNTYTWST--------------------------- 189
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLH 148
M+ GY G +A+K+F E ++ T+ L+ + VG GRQ+H
Sbjct: 190 ----MVSGYAT-RGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIH 244
Query: 149 AFMVKTSNDASGFAV--SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREG 206
+K N GF ++L+ MYSKC EAC++F+ +
Sbjct: 245 CITIK--NGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDR----------------- 285
Query: 207 EMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASAL 266
++++W+ +++GY QNG++ E +KLF RM G++ +E+T L
Sbjct: 286 ----------------NSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVL 329
Query: 267 SACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSF 326
+AC + ++ K++HS++LK G + F ++ +VD+Y K
Sbjct: 330 NACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKA------------------- 370
Query: 327 SISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK-AQNCEALFDLLSEFVTK 385
G + +AR+ FD L E++V +WT+L SGYV+ + N EAL +L +
Sbjct: 371 ------------GCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEAL--ILYRRMKT 416
Query: 386 EGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTY 445
G++ + + +L AC+ A L GK++H + ++ G ++ + S L MYSKCG++
Sbjct: 417 AGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLED 476
Query: 446 AEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRH 505
++F+ +D+V +N MI+ +H+G ++A+ LFEEML +G++PD VTFV I+SA H
Sbjct: 477 GNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSH 536
Query: 506 CGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILG 565
G VE G YFN M+ + P+ DHYACM+DL RA QL++A EF++S + +
Sbjct: 537 KGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWR 596
Query: 566 SFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMK 625
L+ C+ + EL A EKL+ L + YVQL+ +Y A G ++ R+ K MR
Sbjct: 597 ILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANG 656
Query: 626 GNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYE 670
++ GCSW+ ++++ H+F VGD HP ++ + + ++ E
Sbjct: 657 VSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVCLVSRQMIE 701
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 8/157 (5%)
Query: 405 QAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVM 464
Q L G+ +H I+R G + + LV+ Y+KCG + A IF I +D+V +N +
Sbjct: 27 QRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSL 86
Query: 465 IACYAHHG---HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTA 521
I Y+ +G + LF EM + I P+A T I A S +G + +
Sbjct: 87 ITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVV- 145
Query: 522 DYKISPETDHY--ACMIDLYGRANQLEKAIEFMKSIP 556
K+S D Y ++ +Y +A +E ++ +P
Sbjct: 146 --KMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP 180
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 107/245 (43%), Gaps = 33/245 (13%)
Query: 273 RNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMI 332
RN+ + +H +++ G + ++ +V+ Y KC + A S+ ++ S +S+I
Sbjct: 28 RNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLI 87
Query: 333 VGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDA 392
GYS G + + E ++AQ D+L T G
Sbjct: 88 TGYSQNGGISSSYTVMQLFRE-------------MRAQ------DILPNAYTLAG----- 123
Query: 393 LILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQN 452
I +LQ++ G++ HA +++M D + ++LV MY K G + +F
Sbjct: 124 ----IFKAESSLQSST-VGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAY 178
Query: 453 FIERDLVLYNVMIACYAHHGHEEKAILLFEEML---EKGIKPDAVTFVAILSAFRHCGSV 509
ER+ ++ M++ YA G E+AI +F L E+G D V F A+LS+ V
Sbjct: 179 MPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSSLAATIYV 237
Query: 510 EMGEK 514
+G +
Sbjct: 238 GLGRQ 242
>gi|15223809|ref|NP_177827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098688|sp|O49287.1|PP127_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial; Flags: Precursor
gi|2829915|gb|AAC00623.1| Hypothetical protein [Arabidopsis thaliana]
gi|332197804|gb|AEE35925.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 695
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 205/651 (31%), Positives = 341/651 (52%), Gaps = 45/651 (6%)
Query: 18 KAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT---------------- 61
K L+ I N L+ +YS+ + +R LFDEMP+RN FSWNT
Sbjct: 55 KGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLR 114
Query: 62 ---------------IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEAD 106
++S K+ +L AR LF++ P KD+VT NS+L GYI GY +
Sbjct: 115 FFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYI-LNGYAEE 173
Query: 107 ALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSL 166
AL+LF E+ + D T+T+ L C +L + G+Q+HA ++ + SSL
Sbjct: 174 ALRLFKEL-----NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSL 228
Query: 167 IDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVS 226
+++Y+KC A + E E + S +A+++ G + + F R+ +
Sbjct: 229 VNVYAKCGDLRMASYMLEQIREPDDH-SLSALISGYANCGRVNESRGLFDRKSN-RCVIL 286
Query: 227 WNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVL 286
WN++ISGY+ N E L LF M N R + T A+ ++AC GL ++ K++H
Sbjct: 287 WNSMISGYIANNMKMEALVLFNEM-RNETREDSRTLAAVINACIGLGFLETGKQMHCHAC 345
Query: 287 KNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARR 346
K GLI + V+S ++D+Y KC + A + ++ ++SMI Y G +++A+R
Sbjct: 346 KFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKR 405
Query: 347 HFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF--VTKEGVVTDALILVILLGACAL 404
F+ + K+++ W ++ +G+ +QN + L F + K + TD + L ++ ACA
Sbjct: 406 VFERIENKSLISWNSMTNGF--SQN-GCTVETLEYFHQMHKLDLPTDEVSLSSVISACAS 462
Query: 405 QAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVM 464
++L G+++ A +G+ D+ + S+L+D+Y KCG + + +F ++ D V +N M
Sbjct: 463 ISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSM 522
Query: 465 IACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYK 524
I+ YA +G +AI LF++M GI+P +TF+ +L+A +CG VE G K F SM D+
Sbjct: 523 ISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHG 582
Query: 525 ISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAE 584
P+ +H++CM+DL RA +E+AI ++ +P + D + S L C N + +A
Sbjct: 583 FVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAA 642
Query: 585 EKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWV 635
EK++ LE N YVQL+ ++A G+W +RK MR + G SW
Sbjct: 643 EKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSWT 693
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 130/511 (25%), Positives = 251/511 (49%), Gaps = 49/511 (9%)
Query: 8 EALIC----HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
EAL C H Q + G+ + + L+++Y+K LR + + +++ E + S + +I
Sbjct: 201 EALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALI 260
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
S + ++R LFD ++ ++ +NSM+ GYI A + +AL LF EM++ R
Sbjct: 261 SGYANCGRVNESRGLFDRKSNRCVILWNSMISGYI-ANNMKMEALVLFNEMRN---ETRE 316
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
D T+ + +N C+ L + G+Q+H K S+L+DMYSKC EAC++F
Sbjct: 317 DSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLF 376
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
E + I N+M+ G ++ A + F R E +SWN++ +G+ QNG E
Sbjct: 377 SE-VESYDTILLNSMIKVYFSCGRIDDAKRVFER-IENKSLISWNSMTNGFSQNGCTVET 434
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
L+ F +M + + +E + +S +SAC + +++ +++ + GL S+ VSS ++D+
Sbjct: 435 LEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDL 494
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
YCKC G +E RR FD++ + + V W ++
Sbjct: 495 YCKC-------------------------------GFVEHGRRVFDTMVKSDEVPWNSMI 523
Query: 364 SGY-VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI-HAYILRM 421
SGY Q EA+ DL + ++ G+ + +++L AC + G+++ + +
Sbjct: 524 SGYATNGQGFEAI-DLFKK-MSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDH 581
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
G DK+ S +VD+ ++ G + A ++ + + D +++ ++ +G++
Sbjct: 582 GFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKA 641
Query: 481 FEEMLEKGIKPD-AVTFVAILSAFRHCGSVE 510
E+++E ++P+ +V +V + + F G E
Sbjct: 642 AEKIIE--LEPENSVAYVQLSAIFATSGDWE 670
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 197/599 (32%), Positives = 313/599 (52%), Gaps = 69/599 (11%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N+++ + K+ L A LF KD VT+N++L GY + EG+ DA+ LF +MQ D
Sbjct: 178 NSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGY-SKEGFNHDAINLFFKMQ--DL 234
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
R EFT + L +++ ++ FG+Q+H+F+VK + + F ++L+D YSK
Sbjct: 235 GFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHD----- 289
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
R+ E A K F+ PE+ D +S+N LI+ NG
Sbjct: 290 -RIVE--------------------------ARKLFYEMPEV-DGISYNVLITCCAWNGR 321
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
EE L+LF + + FA+ LS N++ ++IHS + IS V +
Sbjct: 322 VEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNS 381
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
+VD+Y KC+ EA R F L ++ V W
Sbjct: 382 LVDMYAKCDKFG-------------------------------EANRIFADLAHQSSVPW 410
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
TAL SGYV+ E L E + + + D+ +L ACA A+L GK++H+ I+
Sbjct: 411 TALISGYVQKGLHEDGLKLFVE-MHRAKIGADSATYASILRACANLASLTLGKQLHSRII 469
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
R G + S LVDMY+KCG++ A +FQ R+ V +N +I+ YA +G A+
Sbjct: 470 RSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALR 529
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
FE+M+ G++P++V+F++IL A HCG VE G +YFNSMT YK+ P +HYA M+D+
Sbjct: 530 SFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDML 589
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG-NNKARY 598
R+ + ++A + M +P E D ++ S LN CR+++N ELA +A ++L ++G + A Y
Sbjct: 590 CRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLFNMKGLRDAAPY 649
Query: 599 VQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
V ++N+YAA G W +G+++K +R + SWV ++ + H+F+ D SHP+T I
Sbjct: 650 VSMSNIYAAAGEWDSVGKVKKALRERGIRKVPAYSWVEIKQKTHVFSANDTSHPQTKEI 708
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 125/515 (24%), Positives = 226/515 (43%), Gaps = 93/515 (18%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYS-KHNLLRESRKLFDEMPERNVFSW 59
M+ L + + + AG+ + I Q +H + K N + NVF
Sbjct: 231 MQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVW------------NVFVA 278
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSML--CGYINAEGYEADALKLFIEMQSA 117
N ++ K + +AR LF P D ++YN ++ C + G ++L+LF E+Q
Sbjct: 279 NALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAW---NGRVEESLELFRELQ-- 333
Query: 118 DEHIRMD--EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRC 175
R D +F + L++ LN+ GRQ+H+ + T + +SL+DMY+KC
Sbjct: 334 --FTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDK 391
Query: 176 YEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYV 235
+ EA R+F + +V W LISGYV
Sbjct: 392 FGEANRIFADLAHQ---------------------------------SSVPWTALISGYV 418
Query: 236 QNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF 295
Q G E+GLKLFV M + + T+AS L AC L ++ K++HS ++++G +SN F
Sbjct: 419 QKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVF 478
Query: 296 VSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKN 355
S +VD+Y KC ++ A M VRNS S +++I Y+ G+ A R F+ +
Sbjct: 479 SGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIH-- 536
Query: 356 VVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIH 415
G+ +++ + +L AC+ + G +
Sbjct: 537 ------------------------------SGLQPNSVSFLSILCACSHCGLVEEGLQYF 566
Query: 416 AYILRM-GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGH 473
+ ++ ++ ++ +++VDM + G AE + E D ++++ ++ H +
Sbjct: 567 NSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKN 626
Query: 474 EEKAILLFEEMLE-KGIKPDAVTFVAILSAFRHCG 507
+E AI +++ KG++ DA +V++ + + G
Sbjct: 627 QELAIKAADQLFNMKGLR-DAAPYVSMSNIYAAAG 660
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 130/265 (49%), Gaps = 9/265 (3%)
Query: 323 RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF 382
+N S ++MI+GY GN+ AR FDS+ +++VV WT L GY + F+L ++
Sbjct: 71 KNVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFAD- 129
Query: 383 VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGN 442
+ + G+V D + L LL +++ ++H +++++G + ++L+D Y K +
Sbjct: 130 MCRHGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRS 189
Query: 443 MTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
+ A +F++ E+D V +N ++ Y+ G AI LF +M + G +P TF A+L+A
Sbjct: 190 LGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTA 249
Query: 503 FRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAV 562
+E G++ +S ++D Y + +++ +A + +P E D +
Sbjct: 250 GIQMDDIEFGQQ-VHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMP-EVDGI 307
Query: 563 ILGSFLNVCRLNRNAELAGEAEEKL 587
+ C N G EE L
Sbjct: 308 SYNVLITCCAWN------GRVEESL 326
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 150/372 (40%), Gaps = 40/372 (10%)
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
N+IS N M+ + G + A F + V+W LI GY Q+ E LF M
Sbjct: 72 NVISTNTMIMGYLKSGNLSTARSLFDSMVQ-RSVVTWTMLIGGYAQHNRFLEAFNLFADM 130
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
+G+ + T A+ LS +V ++H V+K G S V + ++D YCK ++
Sbjct: 131 CRHGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSL 190
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
A + F + EK+ V + AL +GY K
Sbjct: 191 GLACHL-------------------------------FKHMAEKDNVTFNALLTGYSKEG 219
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
+L + + G +L A + G+++H+++++ + +
Sbjct: 220 FNHDAINLFFK-MQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVA 278
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+ L+D YSK + A +F E D + YNV+I C A +G E+++ LF E+
Sbjct: 279 NALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFD 338
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKIS------PETDHYACMIDLYGRANQ 544
F +LS + ++EMG + + IS D YA D +G AN+
Sbjct: 339 RRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYA-KCDKFGEANR 397
Query: 545 LEKAIEFMKSIP 556
+ + S+P
Sbjct: 398 IFADLAHQSSVP 409
>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
Length = 839
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 199/680 (29%), Positives = 337/680 (49%), Gaps = 83/680 (12%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
M+ L L + + ++ +T ++T + +H ++ N R +
Sbjct: 228 MQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKNKFSADRVV-----------GT 276
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
I+ K+ L AR F S P+ + N+M+ G + G A+AL+LF M +
Sbjct: 277 AIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRT-GLGAEALQLFQFMTRSG-- 333
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
I D +++ + C ++ G Q+H +K+ D ++++D+Y KC+ EA
Sbjct: 334 IGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAY 393
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
VF+ EME D+VSWN +I+ QN
Sbjct: 394 LVFQ----------------------EMEQ-----------RDSVSWNAIIAALEQNECY 420
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
E+ + M G+ ++ T+ S L AC GL++++ +H +K+GL + FVSS +
Sbjct: 421 EDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTV 480
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
VD+YCKC G + EA++ D + + +V W
Sbjct: 481 VDMYCKC-------------------------------GMITEAQKLHDRIGGQELVSWN 509
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
++ SG+ + E SE + GV D +L CA A + GK+IH I++
Sbjct: 510 SIISGFSLNKQSEEAQKFFSEMLDI-GVKPDHFTYATVLDTCANLATIELGKQIHGQIIK 568
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
+ D+ + STLVDMY+KCGNM + ++F+ + D V +N MI YA HG +A+ +
Sbjct: 569 QEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVSWNAMICGYALHGQGFEALEM 628
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
FE M + + P+ TFVA+L A H G ++ G +YF MT+ YK+ P+ +H+ACM+D+ G
Sbjct: 629 FERMQQANVVPNHATFVAVLRACSHVGLLDDGCRYFYLMTSRYKLEPQLEHFACMVDILG 688
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQ 600
R+ ++A++F++S+P E DAVI + L++C++ ++ E+A A +LRL+ ++ + Y+
Sbjct: 689 RSKGPQEALKFIRSMPLEADAVIWKTLLSICKIRQDVEVAETAASNVLRLDPDDSSVYIL 748
Query: 601 LANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSV 660
L+NVYA G W ++ R R+ MR + + GCSW+ V+ E+H F GD HP++ +Y +
Sbjct: 749 LSNVYAESGKWVDVSRTRRLMRQGRLKKEPGCSWIEVQSEMHGFLAGDKVHPRSREVYEM 808
Query: 661 LAIFTGEL----YEIAGAFY 676
L E+ YE A A +
Sbjct: 809 LNNLIVEMKLSGYEPASALF 828
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 159/574 (27%), Positives = 263/574 (45%), Gaps = 82/574 (14%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + + +G TT +N L+ +Y++ +R +FD MP R+ SWNT+++A + D
Sbjct: 27 HARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDVMPHRDTVSWNTMLTAYAHAGDT 86
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
A SLF + P D+V++N++L GY G D++ L +EM A + D T+ L
Sbjct: 87 GAAASLFGAMPDPDVVSWNALLSGYCQ-RGMFRDSVGLSVEM--ARRGVAPDRTTLAVLL 143
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C L ++ G Q+HA VKT + A S+L+DMY KCR E+A R F G E
Sbjct: 144 KACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGE---- 199
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
++VSW I+G VQN GL+LFV+M
Sbjct: 200 -----------------------------RNSVSWGAAIAGCVQNEQYTRGLELFVQMQR 230
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G+ ++ +AS +C + + A+++H+ +KN ++ V + IVDVY K +
Sbjct: 231 LGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKAD---- 286
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ-N 371
++ +ARR F SL V A+ G V+
Sbjct: 287 ---------------------------SLVDARRAFFSLPNHTVQACNAMMVGLVRTGLG 319
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
EAL L +F+T+ G+ D + L + ACA G ++H ++ G +D + +
Sbjct: 320 AEAL--QLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRN 377
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
++D+Y KC + A ++FQ +RD V +N +IA + E I EML G++P
Sbjct: 378 AILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEP 437
Query: 492 DAVTFVAILSAFRHC-----GSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLE 546
D T+ ++L A GSV G+ + + D +S + ++D+Y + +
Sbjct: 438 DDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVS------STVVDMYCKCGMIT 491
Query: 547 KAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELA 580
+A + I +E V S ++ LN+ +E A
Sbjct: 492 EAQKLHDRIGGQE-LVSWNSIISGFSLNKQSEEA 524
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 173/410 (42%), Gaps = 45/410 (10%)
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
G+ HA M+ + + F + L+ MY++C A VF+ + +S N M+ A
Sbjct: 23 GQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFD-VMPHRDTVSWNTMLTAYA 81
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
G+ A F P+ D VSWN L+SGY Q G + + L V M GV + T A
Sbjct: 82 HAGDTGAAASLFGAMPD-PDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRTTLA 140
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
L AC GL ++ +IH+ +K GL + S +VD+Y KC
Sbjct: 141 VLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCR--------------- 185
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV 383
++E+A R F + E+N V W A +G V+ + +L + +
Sbjct: 186 ----------------SLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQ-M 228
Query: 384 TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNM 443
+ G+ + +CA L +++HA+ ++ D+ + + +VD+Y+K ++
Sbjct: 229 QRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSL 288
Query: 444 TYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAF 503
A F + + N M+ G +A+ LF+ M GI D V+ + SA
Sbjct: 289 VDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSA- 347
Query: 504 RHCGSVEMGEKYFNSMTAD-YKISPETDHYAC----MIDLYGRANQLEKA 548
C V + Y + I D C ++DLYG+ L +A
Sbjct: 348 --CAEV---KGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCKALVEA 392
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 136/293 (46%), Gaps = 6/293 (2%)
Query: 266 LSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNS 325
L A G + + H+ +L +G + FVS+ ++ +Y +C +A + + R++
Sbjct: 11 LCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDVMPHRDT 70
Query: 326 FSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTK 385
S ++M+ Y+ G+ A F ++ + +VV W AL SGY + L E + +
Sbjct: 71 VSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVE-MAR 129
Query: 386 EGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTY 445
GV D L +LL AC L G +IHA ++ G++MD + S LVDMY KC ++
Sbjct: 130 RGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLED 189
Query: 446 AEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRH 505
A F ER+ V + IA + + + LF +M G+ V+ A S FR
Sbjct: 190 ALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGL---GVSQPAYASVFRS 246
Query: 506 CGSVE--MGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIP 556
C ++ + ++ K S + ++D+Y +A+ L A S+P
Sbjct: 247 CAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLP 299
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 201/647 (31%), Positives = 318/647 (49%), Gaps = 98/647 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H Q IK G L+ +Y K + + ++FDEM +NV
Sbjct: 115 HCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNV---------------- 158
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
V++ S+L GY G ALKLF +MQ E I+ + FT + L
Sbjct: 159 ---------------VSWTSLLAGY-RQNGLNEQALKLFSQMQL--EGIKPNPFTFAAVL 200
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
V G Q+H ++K+ D++ F +S+++MYSK +A VF+
Sbjct: 201 GGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSM------ 254
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
E +AVSWN++I+G+V NG E +LF RM
Sbjct: 255 ---------------------------ENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRL 287
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
GV+ + FA+ + C ++ + AK++H V+KNG + + + ++ Y KC ++
Sbjct: 288 EGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEID- 346
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
++F + M+ G +NVV WTA+ SGYV+
Sbjct: 347 -----------DAFKLFCMMHGV------------------QNVVSWTAIISGYVQNGRT 377
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQ-AALHPGKEIHAYILRMGVQMDKKLIS 431
+ +L + +EGV + +L ACA A++ GK+ H+ ++ G + S
Sbjct: 378 DRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSS 437
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
LV MY+K GN+ A +F+ ++RDLV +N MI+ YA HG +K++ +FEEM K ++
Sbjct: 438 ALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLEL 497
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
D +TF+ ++SA H G V G++YF+ M DY I P +HY+CM+DLY RA LEKA++
Sbjct: 498 DGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDL 557
Query: 552 MKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNW 611
+ +P A I + L CR++ N +L A EKL+ L+ + A YV L+N+YA GNW
Sbjct: 558 INKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNW 617
Query: 612 AEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
E ++RK M K + AG SW+ V+++ F GD+SHP+++ IY
Sbjct: 618 QERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIY 664
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 125/273 (45%), Gaps = 32/273 (11%)
Query: 228 NTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLK 287
N L+ + +N +E L LF+ + +G + + + L C L + K++H +K
Sbjct: 61 NHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIK 120
Query: 288 NGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRH 347
G + + V + +VD+Y K E++ E+ R
Sbjct: 121 CGFVEDVSVGTSLVDMYMKTESV-------------------------------EDGERV 149
Query: 348 FDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAA 407
FD + KNVV WT+L +GY + E L S+ + EG+ + +LG A A
Sbjct: 150 FDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQ-MQLEGIKPNPFTFAAVLGGLAADGA 208
Query: 408 LHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIAC 467
+ G ++H +++ G+ + +++V+MYSK ++ A+ +F + R+ V +N MIA
Sbjct: 209 VEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAG 268
Query: 468 YAHHGHEEKAILLFEEMLEKGIKPDAVTFVAIL 500
+ +G + +A LF M +G+K F ++
Sbjct: 269 FVTNGLDLEAFELFYRMRLEGVKLTQTIFATVI 301
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 111/270 (41%), Gaps = 71/270 (26%)
Query: 5 NLKE---ALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPE-RNVFSWN 60
N+KE A H Q IK G L+ YSK + + ++ KLF M +NV SW
Sbjct: 306 NIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWT 365
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
IIS GY+ G A+ LF +M+ +E
Sbjct: 366 AIIS-------------------------------GYVQ-NGRTDRAMNLFCQMRR-EEG 392
Query: 121 IRMDEFTVTSTLNLC-VKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
+ +EFT +S LN C +V G+Q H+ +K+ + S+L+ MY+K
Sbjct: 393 VEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAK------- 445
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
G +E A + F RQ + D VSWN++ISGY Q+G
Sbjct: 446 -------------------------RGNIESANEVFKRQVD-RDLVSWNSMISGYAQHGC 479
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSAC 269
++ LK+F M + + TF +SAC
Sbjct: 480 GKKSLKIFEEMRSKNLELDGITFIGVISAC 509
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 2/151 (1%)
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
LF QN EAL L + + G TD L +L C GK++H ++
Sbjct: 64 LFEFSRNDQNKEALNLFLG--LRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKC 121
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
G D + ++LVDMY K ++ E +F +++V + ++A Y +G E+A+ LF
Sbjct: 122 GFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLF 181
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMG 512
+M +GIKP+ TF A+L G+VE G
Sbjct: 182 SQMQLEGIKPNPFTFAAVLGGLAADGAVEKG 212
>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 819
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 187/602 (31%), Positives = 309/602 (51%), Gaps = 68/602 (11%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N +I K L AR LFD +++LV++ +M+ GY+ + A+A+ +F M A
Sbjct: 260 NVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQ-NSFNAEAITMFWNMTQAG- 317
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
+ D F TS LN C L + GRQ+HA ++K +A + ++LIDMY+KC EA
Sbjct: 318 -WQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEA 376
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
VF+ E+ DA+S+N +I GY +N D
Sbjct: 377 RAVFDALAED---------------------------------DAISYNAMIEGYSKNRD 403
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
E + +F RM +R + TF S L ++ +K+IH ++K+G + + +S
Sbjct: 404 LAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASA 463
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
++DVY KC +N A+++ F+ L K++V+W
Sbjct: 464 LIDVYSKCSLVNDAKTV-------------------------------FNMLHYKDMVIW 492
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
++ G+ + + E L ++ + G+ + V L+ + A++ G++ HA+I+
Sbjct: 493 NSMIFGHAQNEQGEEAIKLFNQLLLS-GMAPNEFTFVALVTVASTLASMFHGQQFHAWII 551
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
+ GV D + + L+DMY+KCG + ++F++ D++ +N MI YA HGH E+A+
Sbjct: 552 KAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGEDVICWNSMITTYAQHGHAEEALQ 611
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
+F M E ++P+ VTFV +LSA H G V G +FNSM ++Y I P +HYA +++L+
Sbjct: 612 VFRLMGEAEVEPNYVTFVGVLSACAHAGFVGEGLNHFNSMKSNYDIEPGIEHYASVVNLF 671
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYV 599
GR+ +L A EF++ +P + A + S L+ C L NAE+ A E L + + YV
Sbjct: 672 GRSGKLHAAKEFIERMPIKPAAAVWRSLLSACHLFGNAEIGRYAAEMALLADPTDSGPYV 731
Query: 600 QLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYS 659
L+N+YA++G WA++ +R+QM + GCSW+ V E+H F V HP+ IYS
Sbjct: 732 LLSNIYASKGLWADVHNLRQQMDSSGTVKETGCSWIEVTKEVHTFIVRGREHPEAELIYS 791
Query: 660 VL 661
VL
Sbjct: 792 VL 793
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 145/539 (26%), Positives = 243/539 (45%), Gaps = 105/539 (19%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +A AG TN L+ YS LR++R LFD MP RN+ SW ++IS +
Sbjct: 41 HARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQ---- 96
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
G + A+ LF+ Q A + +EF + S L
Sbjct: 97 ----------------------------HGRDDCAISLFVAFQKASCEVP-NEFLLASVL 127
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C + V G Q+H VK DA+ + ++LI++Y+K C +EA VF
Sbjct: 128 RACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAMLVFH-------- 179
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
AL R P V+WNT+I+GY Q G L+LF RMG
Sbjct: 180 ------------------ALPV--RTP-----VTWNTVITGYAQIGCGGVALELFDRMGI 214
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
GVR + ASA+SAC L ++ ++IH + ++ ++ V + ++D+YCKC ++
Sbjct: 215 EGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSA 274
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ-N 371
A + D + +N+V WT + SGY++ N
Sbjct: 275 ARKLF-------------------------------DCMEYRNLVSWTTMISGYMQNSFN 303
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
EA+ + +T+ G D +L +C AA+ G++IHA++++ ++ D+ + +
Sbjct: 304 AEAITMFWN--MTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKN 361
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
L+DMY+KC ++T A +F E D + YN MI Y+ + +A+ +F+ M ++P
Sbjct: 362 ALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRP 421
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA--CMIDLYGRANQLEKA 548
+TFV++L ++E+ ++ + K D YA +ID+Y + + + A
Sbjct: 422 SLLTFVSLLGVSSSQLAIELSKQIHGLII---KSGTSLDLYAASALIDVYSKCSLVNDA 477
Score = 45.8 bits (107), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 69/154 (44%), Gaps = 8/154 (5%)
Query: 408 LHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIAC 467
L+P IHA G D L + L+ YS G + A +F R+LV + +I+
Sbjct: 36 LNPA--IHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISM 93
Query: 468 YAHHGHEEKAILLFEEMLEKGIK-PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKIS 526
Y HG ++ AI LF + + P+ ++L A +V +GE+ K+
Sbjct: 94 YTQHGRDDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAV---KLD 150
Query: 527 PETDHY--ACMIDLYGRANQLEKAIEFMKSIPTE 558
+ + Y +I+LY + +++A+ ++P
Sbjct: 151 LDANVYVGTALINLYAKLGCMDEAMLVFHALPVR 184
>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 192/611 (31%), Positives = 320/611 (52%), Gaps = 42/611 (6%)
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I I H + AR + D +P ++NS++ Y G ++L L+++M +
Sbjct: 33 LIPKLIDLHSIDYARFVLDQTPSPTDFSWNSLIRAY-TVHGSPQNSLFLYLKMLRSST-- 89
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+ FT L C L +V G Q+H +++ + F +SLIDMY KC + A
Sbjct: 90 KPSNFTFPFVLKACSTLGSVLEGEQIHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSARN 149
Query: 182 VFE--GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
++ G +EV S N++++ + G++E A F P + V W +I+GY + GD
Sbjct: 150 FWDDMGFRDEV---SWNSIISGYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGD 206
Query: 240 AEEGLKLFVRM--GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVS 297
E L LF +M + V+ N T LSAC L N + + + ++ N + N +
Sbjct: 207 FVEMLSLFRQMLVSADEVQPNAATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILV 266
Query: 298 SGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVV 357
+ ++D+Y KC G++E+A R FD ++ KN+
Sbjct: 267 TALIDMYSKC-------------------------------GDVEKAWRIFDGVSCKNLP 295
Query: 358 VWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
W A+ +G V+ E DL + + V + + LV +L ACA AL G+E+H Y
Sbjct: 296 SWNAIITGCVQGGLLEEAIDLYRH-MKAQSVKPNEITLVNVLSACAGLGALELGREVHLY 354
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
+ R G+ ++ L + LVDMY+KCG + A +IF E+D+ L+N MI A+HG +
Sbjct: 355 LGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHGDGRDS 414
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID 537
+ +F +M+ G++P+ VTF+ +LSA H G VE G F+SM + +SP+ +HYACM+D
Sbjct: 415 LAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHYACMVD 474
Query: 538 LYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKAR 597
L GRA L++A E ++++ D++I G+ L+ CR++RN ELA + E ++ + N
Sbjct: 475 LLGRAGHLKEAYELVQNMLIPPDSIIWGALLSACRIHRNLELADKISETIMASQDPNIGF 534
Query: 598 YVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
+ L+N+YA+ G W ++ R+R+Q++ + + +GCSWV V+ +H F V D +H K+ I
Sbjct: 535 CILLSNIYASSGRWKDVARVRRQVKEKRIKKPSGCSWVEVDGVVHRFVVEDTTHLKSGEI 594
Query: 658 YSVLAIFTGEL 668
Y I L
Sbjct: 595 YGAYEILVNHL 605
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 18/214 (8%)
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
+IHA L G+ + LI L+D++S + YA + +N +I Y HG
Sbjct: 17 QIHAQTLIHGLPLQTHLIPKLIDLHS----IDYARFVLDQTPSPTDFSWNSLIRAYTVHG 72
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
+ ++ L+ +ML KP TF +L A GSV GE+ T ++ +D +
Sbjct: 73 SPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIH---THVLRLGFGSDLF 129
Query: 533 AC--MIDLYGRANQLEKAIEFMKSIPTEEDA---VILGSFLNVCRLNRNAELAGEAEEKL 587
C +ID+Y + +L+ A F + ++ I+ ++ ++ + +L EE
Sbjct: 130 VCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQVEKARDL---FEEMP 186
Query: 588 LRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQM 621
+R N + + N Y EG++ EM + +QM
Sbjct: 187 MR---RNVVCWTAMINGYGKEGDFVEMLSLFRQM 217
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 202/645 (31%), Positives = 323/645 (50%), Gaps = 107/645 (16%)
Query: 30 QLIHIYSK-HNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLV 88
LI ++ K N + K+FD+M E NV +W +I+ C++
Sbjct: 207 SLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQM------------------- 247
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLH 148
G+ +A++ F++M + D+FT++S + C +L N+ GRQLH
Sbjct: 248 -------------GFPREAIRFFLDMVLSG--FESDKFTLSSVFSACAELENLSLGRQLH 292
Query: 149 AFMVKTSNDASGFAVS---SLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
++ ++ SG A SL+DMY+KC +
Sbjct: 293 SWAIR-----SGLADDVECSLVDMYAKCSA-----------------------------D 318
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD-AEEGLKLFVRMGENG-VRWNEHTFA 263
G ++ K F R + + +SW LI+GY+QN + A E + LF M G V N TF+
Sbjct: 319 GSVDDCRKVFDRMQD-HSVMSWTALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFS 377
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
SA AC + + + K++ K GL SN VS+ ++ ++ KC+ M
Sbjct: 378 SAFKACGNVSDPRVGKQVLGHAFKRGLASNSSVSNSVISMFVKCDRM------------- 424
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV 383
E+AR F+SL+EKN+V + G + + E F+LLSE
Sbjct: 425 ------------------EDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIA 466
Query: 384 TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNM 443
+E V+ A LL A +L G++IH+ +L++G+ ++ + + L+ MYSKCG++
Sbjct: 467 ERELGVS-AFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYSKCGSI 525
Query: 444 TYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAF 503
A +F R+++ + MI +A HG E+ + F +M ++G+KP+ VT+VAILSA
Sbjct: 526 DTASRVFSLMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAILSAC 585
Query: 504 RHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVI 563
H G V G ++FNSM D+KI P+ +HYACM+DL RA L A EF+ ++P + D ++
Sbjct: 586 SHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLV 645
Query: 564 LGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRG 623
+FL CR++ N EL A K+L + N A Y+QL+N+YA+ G W E +R++M+
Sbjct: 646 WRTFLGACRVHSNTELGKLAARKILEFDPNEPAAYIQLSNIYASAGKWEESTEMRRKMKE 705
Query: 624 MKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
+ GCSW+ V ++H F VGD SHP + IY L E+
Sbjct: 706 RNLVKEGGCSWIEVGDKVHKFYVGDTSHPNAHQIYDELDWLITEI 750
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 177/404 (43%), Gaps = 72/404 (17%)
Query: 112 IEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYS 171
+++ + D MD T +S L C++ + G+ +HA +++ + +SLI +YS
Sbjct: 49 LDLMARDGIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYS 108
Query: 172 KCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLI 231
K +A VFE + F ++ D VSW+ ++
Sbjct: 109 KSGDLTKAKDVFE--------------------------TMGRFGKR----DVVSWSAMM 138
Query: 232 SGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG-L 290
+ + NG + +KLFV E G+ N++ + + + AC V + I +++K G
Sbjct: 139 ACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTAVIRACSNSDFVGVGRVILGFLMKTGHF 198
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
S+ V ++D++ K EN + E A + FD
Sbjct: 199 ESDVCVGCSLIDMFVKGEN------------------------------SFENAYKVFDK 228
Query: 351 LTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHP 410
++E NVV WT + + ++ + V G +D L + ACA L
Sbjct: 229 MSELNVVTWTLMITRCMQMGFPREAIRFFLDMVL-SGFESDKFTLSSVFSACAELENLSL 287
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKC---GNMTYAEIIFQNFIERDLVLYNVMIAC 467
G+++H++ +R G+ D + +LVDMY+KC G++ +F + ++ + +I
Sbjct: 288 GRQLHSWAIRSGLADDVE--CSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITG 345
Query: 468 YAHHGH-EEKAILLFEEMLEKG-IKPDAVTFVAILSAFRHCGSV 509
Y + + +AI LF EM+ +G ++P+ TF SAF+ CG+V
Sbjct: 346 YMQNCNLATEAINLFSEMITQGHVEPNHFTFS---SAFKACGNV 386
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 78/137 (56%), Gaps = 4/137 (2%)
Query: 381 EFVTKEGV-VTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
+ + ++G+ D++ LL +C GK +HA ++ ++ D L ++L+ +YSK
Sbjct: 50 DLMARDGIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSK 109
Query: 440 CGNMTYAEIIFQN---FIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTF 496
G++T A+ +F+ F +RD+V ++ M+AC+ ++G E AI LF E LE G+ P+ +
Sbjct: 110 SGDLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCY 169
Query: 497 VAILSAFRHCGSVEMGE 513
A++ A + V +G
Sbjct: 170 TAVIRACSNSDFVGVGR 186
>gi|326507326|dbj|BAJ95740.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 798
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 205/647 (31%), Positives = 336/647 (51%), Gaps = 12/647 (1%)
Query: 24 TTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP 83
+ T + ++H + K + +R LFD MPERNV S+ T++ A +K + +A L++ P
Sbjct: 150 SPFTYDFMVHEHVKAGDIASARGLFDGMPERNVVSYTTMVDALMKRGRVAEAVELYEQCP 209
Query: 84 HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGF 143
+ + + + G++ E + +AL +F +M S +R + T + CV G
Sbjct: 210 SGSVAFFTATISGFVRNELHH-NALGVFRKMVSCG--VRPNGITFVCMIKACVGAGEFGL 266
Query: 144 GRQLHAFMVKTSNDASGFAV-SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAAC 202
+ +K++ S V +SLI +Y + A +VF+ + +++S A++
Sbjct: 267 AMSIVGSAIKSNFFESSIEVQNSLITLYLRMGDAAAARKVFDE-MDVKDVVSWTALLDVY 325
Query: 203 CREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTF 262
G+++ A + PE N+ VSW TLI+ + Q G+A E +KL+ +M +G R N F
Sbjct: 326 SESGDLDGARRVLDAMPERNE-VSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCF 384
Query: 263 ASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGV 322
+S LSAC L +++ IH+ LK G +N FVSS ++D+YCKC+ A+++
Sbjct: 385 SSVLSACATLEDLRGGARIHARSLKMGSSTNVFVSSSLIDMYCKCKKCRDAQTIFDTLPE 444
Query: 323 RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF 382
+N +S+ GYS G M EA F + +N+ W + SGY AQN D L F
Sbjct: 445 KNIVCWNSLASGYSYNGKMVEAMYLFKKMPARNLASWNTIISGY--AQN-RQFVDALRSF 501
Query: 383 --VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC 440
+ G V + +L ACA +L GK HA +++G++ + + L DMY+K
Sbjct: 502 NAMLASGQVPGEITFSSVLLACANLCSLVTGKMAHAKTIKLGMEESIFIGTALSDMYAKS 561
Query: 441 GNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAIL 500
G++ ++ +F ER+ V + MI A +G E++ILL E+M+ G+ P+ TF+A+L
Sbjct: 562 GDLQSSKRMFYQMPERNDVTWTAMIQGLAENGFAEESILLLEDMMATGMTPNEHTFLALL 621
Query: 501 SAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEED 560
A H G VE YF M A + ISP+ HY CM+D+ RA +L +A + P++ +
Sbjct: 622 FACSHGGLVEQAIHYFEKMQA-WGISPKEKHYTCMVDVLARAGRLIEAEALLMKTPSKSE 680
Query: 561 AVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQ 620
A + L+ C +N E+ A ++L L +N A YV L+N+YA+ G W + RIR
Sbjct: 681 ANSWAALLSACNTYKNEEIGERAAKRLHELGKDNTAGYVLLSNMYASCGRWKDAARIRVL 740
Query: 621 MRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGE 667
M+G + GCSWV V + H F + HP + I +L + E
Sbjct: 741 MKGTTLKKDGGCSWVQVRGQYHAFFSWEAKHPLSMEINEILDLLLWE 787
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 123/520 (23%), Positives = 217/520 (41%), Gaps = 110/520 (21%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
M+ + EA+ + Q + T T + + HN L RK+ N ++
Sbjct: 193 MKRGRVAEAVELYEQCPSGSVAFFTATISGFVRNELHHNALGVFRKMVSCGVRPNGITFV 252
Query: 61 TIISAC----------------IKSH--------------------DLKQARSLFDSSPH 84
+I AC IKS+ D AR +FD
Sbjct: 253 CMIKACVGAGEFGLAMSIVGSAIKSNFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDV 312
Query: 85 KDLVTYNSMLCGYINA------------------------------EGYEADALKLFIEM 114
KD+V++ ++L Y + G A+A+KL+ +M
Sbjct: 313 KDVVSWTALLDVYSESGDLDGARRVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYSQM 372
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
+ + R + +S L+ C L ++ G ++HA +K + + F SSLIDMY KC+
Sbjct: 373 LA--DGCRPNISCFSSVLSACATLEDLRGGARIHARSLKMGSSTNVFVSSSLIDMYCKCK 430
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
+A +F+ E+ N++ N++ + G+M A+ F + P N A SWNT+ISGY
Sbjct: 431 KCRDAQTIFDTLPEK-NIVCWNSLASGYSYNGKMVEAMYLFKKMPARNLA-SWNTIISGY 488
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
QN + L+ F M +G E TF+S L AC L ++ K H+ +K G+ +
Sbjct: 489 AQNRQFVDALRSFNAMLASGQVPGEITFSSVLLACANLCSLVTGKMAHAKTIKLGMEESI 548
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
F+ + + D+Y K G+++ ++R F + E+
Sbjct: 549 FIGTALSDMYAK-------------------------------SGDLQSSKRMFYQMPER 577
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACA----LQAALHP 410
N V WTA+ G + E LL + + G+ + + LL AC+ ++ A+H
Sbjct: 578 NDVTWTAMIQGLAENGFAEESILLLEDMMAT-GMTPNEHTFLALLFACSHGGLVEQAIHY 636
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIF 450
+++ A+ G+ +K + +VD+ ++ G + AE +
Sbjct: 637 FEKMQAW----GISPKEKHYTCMVDVLARAGRLIEAEALL 672
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 152/318 (47%), Gaps = 44/318 (13%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L+ H +++K G + ++ LI +Y K R+++ +FD +PE+N+ WN++ S
Sbjct: 396 DLRGGARIHARSLKMGSSTNVFVSSSLIDMYCKCKKCRDAQTIFDTLPEKNIVCWNSLAS 455
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
+ + +A LF P ++L ++N+++ GY + DAL+ F M ++ +
Sbjct: 456 GYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQF-VDALRSFNAMLASGQ--VPG 512
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
E T +S L C L ++ G+ HA +K + S F ++L DMY+K
Sbjct: 513 EITFSSVLLACANLCSLVTGKMAHAKTIKLGMEESIFIGTALSDMYAK------------ 560
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
G+++ + + F++ PE ND V+W +I G +NG AEE +
Sbjct: 561 --------------------SGDLQSSKRMFYQMPERND-VTWTAMIQGLAENGFAEESI 599
Query: 245 KLFVRMGENGVRWNEHTFASALSACC--GL--RNVKCAKEIHSWVLKNGLISNPFVSSGI 300
L M G+ NEHTF + L AC GL + + +++ +W G+ + +
Sbjct: 600 LLLEDMMATGMTPNEHTFLALLFACSHGGLVEQAIHYFEKMQAW----GISPKEKHYTCM 655
Query: 301 VDVYCKCENMNYAESMLL 318
VDV + + AE++L+
Sbjct: 656 VDVLARAGRLIEAEALLM 673
>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 849
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 196/618 (31%), Positives = 316/618 (51%), Gaps = 68/618 (11%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
E V NT++S K L++A LF P DLVT+N M+ G + G DAL+LF
Sbjct: 280 EPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQ-NGLVDDALRLFC 338
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
+MQ + ++ D T+ S L +L G+++H ++V+ F VS+L+D+Y K
Sbjct: 339 DMQKSG--LQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYFK 396
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
CR A VF+ A K+ D V +T+IS
Sbjct: 397 CRDVRMAQNVFD--------------------------ATKSI-------DVVIGSTMIS 423
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
GYV N +E +K+F + G++ N AS L AC + ++ +E+H +VLKN
Sbjct: 424 GYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEG 483
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
+V S ++D+Y KC ++ + M F ++
Sbjct: 484 RCYVESALMDMYSKCGRLDLSHYM-------------------------------FSKMS 512
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
K+ V W ++ S + + E DL + + EGV + + + +L ACA A++ GK
Sbjct: 513 AKDEVTWNSMISSFAQNGEPEEALDLFRQMIM-EGVKYNNVTISSILSACAGLPAIYYGK 571
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
EIH I++ ++ D S L+DMY KCGN+ A +F++ E++ V +N +I+ Y HG
Sbjct: 572 EIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIISAYGAHG 631
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
++++ L M E+G K D VTF+A++SA H G V+ G + F MT +Y I P+ +H
Sbjct: 632 LVKESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQEGLRLFRCMTEEYHIEPQVEHL 691
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
+CM+DLY RA +L+KA++F+ +P + DA I G+ L+ CR++RN ELA A ++L +L+
Sbjct: 692 SCMVDLYSRAGKLDKAMQFIADMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDP 751
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
+N YV ++N+ A G W + ++R+ M+ K + G SWV V + H+F D +HP
Sbjct: 752 HNCGYYVLMSNINAVAGRWDGVSKMRRLMKDKKVQKIPGYSWVDVNNTSHLFVAADKNHP 811
Query: 653 KTNAIYSVLAIFTGELYE 670
+ IY L EL +
Sbjct: 812 DSEEIYMSLKSLIIELKQ 829
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 139/510 (27%), Positives = 246/510 (48%), Gaps = 73/510 (14%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
+R+++ + +I + L AR +FD +D V +N M+ GY+ A G A A+ LF
Sbjct: 179 DRDMYVGSALIKMYADAGLLDGAREVFDGMDERDCVLWNVMMDGYVKA-GDVASAVGLFR 237
Query: 113 EMQSA--DEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMY 170
M+++ D + T+ L++C ++ G QLH VK + ++L+ MY
Sbjct: 238 VMRASGCDPNFA----TLACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMY 293
Query: 171 SKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTL 230
+KC+C EEA R+F G +L++ N M++ C
Sbjct: 294 AKCQCLEEAWRLF-GLMPRDDLVTWNGMISGC---------------------------- 324
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL 290
VQNG ++ L+LF M ++G++ + T AS L A L K KEIH ++++N
Sbjct: 325 ----VQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCA 380
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
+ F+ S +VD+Y KC ++ A+++ FD+
Sbjct: 381 HVDVFLVSALVDIYFKCRDVRMAQNV-------------------------------FDA 409
Query: 351 LTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHP 410
+VV+ + + SGYV + EA + ++ G+ +A+++ L ACA AA+
Sbjct: 410 TKSIDVVIGSTMISGYVLNRMSEAAVKMF-RYLLALGIKPNAVMVASTLPACASMAAMRI 468
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
G+E+H Y+L+ + + S L+DMYSKCG + + +F +D V +N MI+ +A
Sbjct: 469 GQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQ 528
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD 530
+G E+A+ LF +M+ +G+K + VT +ILSA ++ G K + + I +
Sbjct: 529 NGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYG-KEIHGIIIKGPIRADLF 587
Query: 531 HYACMIDLYGRANQLEKAIEFMKSIPTEED 560
+ +ID+YG+ LE A+ + +P + +
Sbjct: 588 AESALIDMYGKCGNLELALRVFEHMPEKNE 617
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 118/525 (22%), Positives = 212/525 (40%), Gaps = 84/525 (16%)
Query: 111 FIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSN-DASGFAVSSL--- 166
F E S+ + + + + L CV ++ G ++HA V + DA+G ++L
Sbjct: 22 FSETASSATNASPCAYRLLALLRGCVAPSHLPLGLRIHARAVTSGLLDAAGPGPAALQTR 81
Query: 167 -IDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAV 225
+ MY R + +A VF + +
Sbjct: 82 LVGMYVLARRFRDAVAVFSSLPRAAAAAA------------------------------L 111
Query: 226 SWNTLISGYVQNGDAEEGLKLFVRMG--ENGVRWNEHTFASALSACCGLRNVKCAKEIHS 283
WN LI G+ G + +V+M + R + HT + +C L + + +H
Sbjct: 112 PWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYVVKSCAALGALHLGRLVHR 171
Query: 284 WVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEE 343
GL + +V S ++ +Y G ++
Sbjct: 172 TTRALGLDRDMYVGSALIKMYADA-------------------------------GLLDG 200
Query: 344 ARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACA 403
AR FD + E++ V+W + GYVKA + + L + G + L L CA
Sbjct: 201 AREVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLF-RVMRASGCDPNFATLACFLSVCA 259
Query: 404 LQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNV 463
+A L G ++H ++ G++ + + +TLV MY+KC + A +F DLV +N
Sbjct: 260 AEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNG 319
Query: 464 MIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADY 523
MI+ +G + A+ LF +M + G++PD+VT ++L A + G++ + +
Sbjct: 320 MISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRN- 378
Query: 524 KISPETDHY--ACMIDLYGRANQLEKA---IEFMKSIPTEEDAVILGSFLNVCRLNRNAE 578
D + + ++D+Y + + A + KSI D VI + ++ LNR +E
Sbjct: 379 --CAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSI----DVVIGSTMISGYVLNRMSE 432
Query: 579 LAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRG 623
A + LL L K V +A+ A + A M RI +++ G
Sbjct: 433 AAVKMFRYLLAL--GIKPNAVMVASTLPACASMAAM-RIGQELHG 474
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 199/671 (29%), Positives = 325/671 (48%), Gaps = 68/671 (10%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
+S L E H +K G N LIH Y + + R++FD+M ERNV
Sbjct: 151 KSAALTEGFQVHGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNV----- 205
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
V++ S++ GY Y+ +A+ LF EM + I
Sbjct: 206 --------------------------VSWTSLIGGYAKRGCYK-EAVSLFFEM--VEVGI 236
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
R + T+ ++ C KL ++ G Q+ + + + + V++L+DMY KC ++A +
Sbjct: 237 RPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARK 296
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F+ C ++ + V +NT++S YV+ G A
Sbjct: 297 IFDECVDK---------------------------------NLVLYNTIMSNYVRQGLAR 323
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E L + M ++G R + T SA+SAC L +V C K H +VL+NGL V + I+
Sbjct: 324 EVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAII 383
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
++Y KC A + + S +S+I G+ G+ME A + F ++ + ++V W
Sbjct: 384 NMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNT 443
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+ V+ + +L + EG+ D + +V + AC AL K IH YI +
Sbjct: 444 MIGALVQESMFKEAIELF-RVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKK 502
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
+ D L + LVDM+++CG+ A +F ++RD+ + I A G+ AI LF
Sbjct: 503 DIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELF 562
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGR 541
+EML++GIKPD V FVA+L+A H G VE G F SM Y I+P+ HY CM+DL GR
Sbjct: 563 DEMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGR 622
Query: 542 ANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQL 601
A L +A+ + S+ E + VI GS L CR+++N ++A A E++ L+ +V L
Sbjct: 623 AGLLSEALSLINSMQMEPNDVIWGSLLAACRVHKNVDIAAYAAERISELDPERTGIHVLL 682
Query: 602 ANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+N+YA+ G W ++ ++R ++ ++ G S + + +I FT GD SHP+ I +L
Sbjct: 683 SNIYASAGRWDDVAKVRLHLKEKGAHKMPGSSSIEINGKIFEFTTGDESHPEMTHIEPML 742
Query: 662 AIFTGELYEIA 672
L +I
Sbjct: 743 KEICCRLRDIG 753
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 109/458 (23%), Positives = 189/458 (41%), Gaps = 97/458 (21%)
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
D FT L+ C K + G Q+H +VK + F +SLI Y +C
Sbjct: 138 DNFTFPFVLSACTKSAALTEGFQVHGAIVKMGFERDMFVENSLIHFYGEC---------- 187
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
GE++ + F + E N VSW +LI GY + G +E
Sbjct: 188 ----------------------GEIDCMRRVFDKMSERN-VVSWTSLIGGYAKRGCYKEA 224
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
+ LF M E G+R N T +SAC L++++ +++ + + + L N + + +VD+
Sbjct: 225 VSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDM 284
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y KC G +++AR+ FD +KN+V++ +
Sbjct: 285 YMKC-------------------------------GAIDKARKIFDECVDKNLVLYNTIM 313
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
S YV+ + +L E + K G D + ++ + AC+ + GK H Y+LR G+
Sbjct: 314 SNYVRQGLAREVLAVLGEML-KHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGL 372
Query: 424 QMDKKLISTLVDMYSKC-------------------------------GNMTYAEIIFQN 452
+ + + +++MY KC G+M A IF
Sbjct: 373 EGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSA 432
Query: 453 FIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMG 512
+ DLV +N MI ++AI LF M +GI D VT V + SA + G++++
Sbjct: 433 MPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLA 492
Query: 513 EKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
K+ + I + ++D++ R + A++
Sbjct: 493 -KWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQ 529
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 138/287 (48%), Gaps = 32/287 (11%)
Query: 227 WNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVL 286
+++LI G+ G + + +F ++ G + TF LSAC + ++H ++
Sbjct: 107 FSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIV 166
Query: 287 KNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARR 346
K G + FV + ++ Y +C G ++ RR
Sbjct: 167 KMGFERDMFVENSLIHFYGEC-------------------------------GEIDCMRR 195
Query: 347 HFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQA 406
FD ++E+NVV WT+L GY K + L E V + G+ +++ +V ++ ACA
Sbjct: 196 VFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMV-EVGIRPNSVTMVGVISACAKLQ 254
Query: 407 ALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIA 466
L G+++ I + ++++ +++ LVDMY KCG + A IF ++++LVLYN +++
Sbjct: 255 DLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMS 314
Query: 467 CYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
Y G + + + EML+ G +PD +T ++ +SA V G+
Sbjct: 315 NYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGK 361
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 130/278 (46%), Gaps = 41/278 (14%)
Query: 279 KEIHSWVLKNGLISNPFVSSGIVDVYCKC---ENMNYAESMLLL----KGVRNS-FSISS 330
K++HS + KNGL +P + ++ + E++ YA+ L L G+ + + SS
Sbjct: 50 KQLHSQITKNGLNHHPLSLTNLISSCTEMGTFESLEYAQKALELFIEDNGIMGTHYMFSS 109
Query: 331 MIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVT 390
+I G+S G L K +VV+ L G V
Sbjct: 110 LIRGFSACG-----------LGYKAIVVFRQLMC---------------------MGAVP 137
Query: 391 DALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIF 450
D +L AC AAL G ++H I++MG + D + ++L+ Y +CG + +F
Sbjct: 138 DNFTFPFVLSACTKSAALTEGFQVHGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVF 197
Query: 451 QNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVE 510
ER++V + +I YA G ++A+ LF EM+E GI+P++VT V ++SA ++
Sbjct: 198 DKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQ 257
Query: 511 MGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
+GE+ + + ++ ++D+Y + ++KA
Sbjct: 258 LGEQVCTCI-GELELEVNALMVNALVDMYMKCGAIDKA 294
>gi|297839569|ref|XP_002887666.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333507|gb|EFH63925.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 675
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 201/648 (31%), Positives = 340/648 (52%), Gaps = 41/648 (6%)
Query: 18 KAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT---------------- 61
K ++ I N L+ IYS+ + +R LFDEMPERN FSWNT
Sbjct: 35 KGFISSIVIVANHLLQIYSRSGKMGIARNLFDEMPERNYFSWNTMIEGYMNSGDKGTSLR 94
Query: 62 ---------------IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEAD 106
+IS K+ +L AR LFD+ P KD+VT NS+L GYI GY +
Sbjct: 95 FFDMMPERDGYSWNVVISGFAKAGELSVARRLFDAMPEKDVVTLNSLLHGYI-LNGYSEE 153
Query: 107 ALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSL 166
AL+LF E++ D T+T+ L C +L + G+Q+HA ++ + SSL
Sbjct: 154 ALRLFKELK-----FSADAITLTTVLKACAELEALKRGKQIHAQILIGGVECDSKMNSSL 208
Query: 167 IDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVS 226
+++Y+KC A + E E + S + +++ G + + + F R+ +
Sbjct: 209 VNVYAKCGDLRMASYMLEQIGEPDDH-SLSTLISGYANCGRVNESRRLFDRKSN-RCVIL 266
Query: 227 WNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVL 286
WN++ISGY+ N E L LF M N + T A+ ++AC GL ++ K++H
Sbjct: 267 WNSMISGYIANNMKFEALVLFNEM-RNETWEDSRTLAAVINACIGLGFLETGKQMHCHAC 325
Query: 287 KNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARR 346
K GL+ + V+S ++D+Y KC + A + ++ ++SMI Y G +++A+R
Sbjct: 326 KFGLVDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKR 385
Query: 347 HFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQA 406
F+ + K+++ W ++ +G+ + + S+ + K + TD + L ++ ACA +
Sbjct: 386 VFERIENKSLISWNSMTNGFSQNGCPVETLEYFSQ-MHKLDLPTDEVSLSSVISACASIS 444
Query: 407 ALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIA 466
+L G+++ A +G+ D+ + S+L+D+Y KCG++ +F ++ D V +N MI+
Sbjct: 445 SLGLGEQVFARATIVGLDSDQIVSSSLIDLYCKCGSVENGRRVFDTMVKSDEVPWNSMIS 504
Query: 467 CYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKIS 526
YA +GH +AI LF++M GI+P +TF+ +L+A +CG VE G F +M D+
Sbjct: 505 GYATNGHGFEAIDLFKKMSIAGIRPTQITFMVVLTACNYCGLVEEGRLLFEAMKLDHGFV 564
Query: 527 PETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEK 586
P+ +H++CM+DL RA +E+AI+ ++ +P + DA + S L C N + + EK
Sbjct: 565 PDKEHFSCMVDLLARAGYVEEAIDLVEEMPFDADASMWSSVLRGCVANGYKAMGKKVAEK 624
Query: 587 LLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSW 634
++ LE N YVQL+ ++A G+W +RK MR ++ G SW
Sbjct: 625 IIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVSKNPGSSW 672
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 127/508 (25%), Positives = 247/508 (48%), Gaps = 43/508 (8%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
LK H Q + G+ + + L+++Y+K LR + + +++ E + S +T+IS
Sbjct: 183 LKRGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIGEPDDHSLSTLISG 242
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
+ ++R LFD ++ ++ +NSM+ GYI A + +AL LF EM++ D
Sbjct: 243 YANCGRVNESRRLFDRKSNRCVILWNSMISGYI-ANNMKFEALVLFNEMRNETWE---DS 298
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
T+ + +N C+ L + G+Q+H K S+L+DMYSKC EAC++F
Sbjct: 299 RTLAAVINACIGLGFLETGKQMHCHACKFGLVDDIVVASTLLDMYSKCGSPMEACKLFSE 358
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
E + I N+M+ G ++ A + F R E +SWN++ +G+ QNG E L+
Sbjct: 359 -VESYDTILLNSMIKVYFSCGRIDDAKRVFER-IENKSLISWNSMTNGFSQNGCPVETLE 416
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
F +M + + +E + +S +SAC + ++ +++ + GL S+ VSS ++D+YC
Sbjct: 417 YFSQMHKLDLPTDEVSLSSVISACASISSLGLGEQVFARATIVGLDSDQIVSSSLIDLYC 476
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
KC G++E RR FD++ + + V W ++ SG
Sbjct: 477 KC-------------------------------GSVENGRRVFDTMVKSDEVPWNSMISG 505
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI-HAYILRMGVQ 424
Y + DL + ++ G+ + +++L AC + G+ + A L G
Sbjct: 506 YATNGHGFEAIDLFKK-MSIAGIRPTQITFMVVLTACNYCGLVEEGRLLFEAMKLDHGFV 564
Query: 425 MDKKLISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
DK+ S +VD+ ++ G + A +++ + + D +++ ++ +G++ + E+
Sbjct: 565 PDKEHFSCMVDLLARAGYVEEAIDLVEEMPFDADASMWSSVLRGCVANGYKAMGKKVAEK 624
Query: 484 MLEKGIKPD-AVTFVAILSAFRHCGSVE 510
++E ++P+ +V +V + + F G E
Sbjct: 625 IIE--LEPENSVAYVQLSAIFATSGDWE 650
>gi|326522488|dbj|BAK07706.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 799
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 205/647 (31%), Positives = 337/647 (52%), Gaps = 12/647 (1%)
Query: 24 TTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP 83
+ T + ++H + K + +R LFD MPER+V S+ T++ A +K + +A L++ P
Sbjct: 151 SPFTYDFMVHEHVKAGDIASARGLFDGMPERSVVSYTTMVDALMKRGRVAEAVELYEQCP 210
Query: 84 HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGF 143
+ + + + G++ E + +AL +F +M S +R + T + CV G
Sbjct: 211 SGSVAFFTATISGFVRNELHH-NALGVFRKMVSCG--VRPNGITFVCMIKACVGAGEFGL 267
Query: 144 GRQLHAFMVKTSNDASGFAV-SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAAC 202
+ +K++ S V +SLI +Y + A +VF+ + +++S A++
Sbjct: 268 AMSIVGSAIKSNFFESSIEVQNSLITLYLRMGDAAAARKVFDE-MDVKDVVSWTALLDVY 326
Query: 203 CREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTF 262
G+++ A + PE N+ VSW TLI+ + Q G+A E +KL+ +M +G R N F
Sbjct: 327 SESGDLDGARRVLDAMPERNE-VSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCF 385
Query: 263 ASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGV 322
+S LSAC L +++ IH+ LK G +N FVSS ++D+YCKC+ A+++
Sbjct: 386 SSVLSACATLEDLRGGARIHARSLKMGSSTNVFVSSSLIDMYCKCKKCRDAQTIFDTLPE 445
Query: 323 RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF 382
+N +S+ GYS G M EA F + +N+ W + SGY AQN D L F
Sbjct: 446 KNIVCWNSLASGYSYNGKMVEAMYLFKKMPARNLASWNTIISGY--AQN-RQFVDALRSF 502
Query: 383 --VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC 440
+ G V + +L ACA +L GK HA +++G++ + + L DMY+K
Sbjct: 503 NAMLASGQVPGEITFSSVLLACANLCSLVTGKMAHAKTIKLGMEESIFIGTALSDMYAKS 562
Query: 441 GNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAIL 500
G++ ++ +F ER+ V + MI A +G E++ILLFE+M+ G+ P+ TF+A+L
Sbjct: 563 GDLQSSKRMFYQMPERNDVTWTAMIQGLAENGLAEESILLFEDMMATGMTPNEHTFLALL 622
Query: 501 SAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEED 560
A H G VE YF M A + ISP+ HY CM+D+ RA +L +A + P++ +
Sbjct: 623 FACSHGGLVEQAIHYFEKMQA-WGISPKEKHYTCMVDVLARAGRLIEAEALLMKTPSKSE 681
Query: 561 AVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQ 620
A + L+ C +N E+ A ++L L +N A YV L+N+YA+ G W + RIR
Sbjct: 682 ANSWAALLSACNTYKNEEIGERAAKRLHELGKDNTAGYVLLSNMYASCGRWKDAARIRVL 741
Query: 621 MRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGE 667
M+G + GCSWV V + H F + HP + I +L + E
Sbjct: 742 MKGTTLKKDGGCSWVQVRGQYHAFFSWEAKHPLSMEINEILDLLLWE 788
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 124/520 (23%), Positives = 217/520 (41%), Gaps = 110/520 (21%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
M+ + EA+ + Q + T T + + HN L RK+ N ++
Sbjct: 194 MKRGRVAEAVELYEQCPSGSVAFFTATISGFVRNELHHNALGVFRKMVSCGVRPNGITFV 253
Query: 61 TIISAC----------------IKSH--------------------DLKQARSLFDSSPH 84
+I AC IKS+ D AR +FD
Sbjct: 254 CMIKACVGAGEFGLAMSIVGSAIKSNFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDV 313
Query: 85 KDLVTYNSMLCGYINA------------------------------EGYEADALKLFIEM 114
KD+V++ ++L Y + G A+A+KL+ +M
Sbjct: 314 KDVVSWTALLDVYSESGDLDGARRVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYSQM 373
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
+ + R + +S L+ C L ++ G ++HA +K + + F SSLIDMY KC+
Sbjct: 374 LA--DGCRPNISCFSSVLSACATLEDLRGGARIHARSLKMGSSTNVFVSSSLIDMYCKCK 431
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
+A +F+ E+ N++ N++ + G+M A+ F + P N A SWNT+ISGY
Sbjct: 432 KCRDAQTIFDTLPEK-NIVCWNSLASGYSYNGKMVEAMYLFKKMPARNLA-SWNTIISGY 489
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
QN + L+ F M +G E TF+S L AC L ++ K H+ +K G+ +
Sbjct: 490 AQNRQFVDALRSFNAMLASGQVPGEITFSSVLLACANLCSLVTGKMAHAKTIKLGMEESI 549
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
F+ + + D+Y K G+++ ++R F + E+
Sbjct: 550 FIGTALSDMYAK-------------------------------SGDLQSSKRMFYQMPER 578
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACA----LQAALHP 410
N V WTA+ G + E LL E + G+ + + LL AC+ ++ A+H
Sbjct: 579 NDVTWTAMIQGLAENGLAEESI-LLFEDMMATGMTPNEHTFLALLFACSHGGLVEQAIHY 637
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIF 450
+++ A+ G+ +K + +VD+ ++ G + AE +
Sbjct: 638 FEKMQAW----GISPKEKHYTCMVDVLARAGRLIEAEALL 673
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 153/318 (48%), Gaps = 44/318 (13%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L+ H +++K G + ++ LI +Y K R+++ +FD +PE+N+ WN++ S
Sbjct: 397 DLRGGARIHARSLKMGSSTNVFVSSSLIDMYCKCKKCRDAQTIFDTLPEKNIVCWNSLAS 456
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
+ + +A LF P ++L ++N+++ GY + DAL+ F M ++ +
Sbjct: 457 GYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQF-VDALRSFNAMLASGQ--VPG 513
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
E T +S L C L ++ G+ HA +K + S F ++L DMY+K
Sbjct: 514 EITFSSVLLACANLCSLVTGKMAHAKTIKLGMEESIFIGTALSDMYAK------------ 561
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
G+++ + + F++ PE ND V+W +I G +NG AEE +
Sbjct: 562 --------------------SGDLQSSKRMFYQMPERND-VTWTAMIQGLAENGLAEESI 600
Query: 245 KLFVRMGENGVRWNEHTFASALSACC--GL--RNVKCAKEIHSWVLKNGLISNPFVSSGI 300
LF M G+ NEHTF + L AC GL + + +++ +W G+ + +
Sbjct: 601 LLFEDMMATGMTPNEHTFLALLFACSHGGLVEQAIHYFEKMQAW----GISPKEKHYTCM 656
Query: 301 VDVYCKCENMNYAESMLL 318
VDV + + AE++L+
Sbjct: 657 VDVLARAGRLIEAEALLM 674
>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 734
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 190/611 (31%), Positives = 327/611 (53%), Gaps = 68/611 (11%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
+V+ +++++ K+ + AR LFD P ++ V++ +M+ GY +++ AD E+
Sbjct: 152 DVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSD--IADKAVEVFEL 209
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
+E I+ +EF +TS L+ + V GRQ+H+ +K A ++L+ MY+KC
Sbjct: 210 MRREEEIQ-NEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKC- 267
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
G ++ A++TF + N +++W+ +++GY
Sbjct: 268 -------------------------------GSLDDAVRTFEFSGDKN-SITWSAMVTGY 295
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
Q GD+++ LKLF +M +GV +E T ++AC L V K++HS+ K G
Sbjct: 296 AQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQL 355
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
+V S +VD+Y KC G++ +AR+ F+ + +
Sbjct: 356 YVLSAVVDMYAKC-------------------------------GSLADARKGFECVQQP 384
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
+VV+WT++ +GYV+ + E +L + + E V+ + L + +L AC+ AAL GK++
Sbjct: 385 DVVLWTSIITGYVQNGDYEGGLNLYGK-MQMERVIPNELTMASVLRACSSLAALDQGKQM 443
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
HA I++ G +++ + S L MY+KCG++ +IF RD++ +N MI+ + +GH
Sbjct: 444 HARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNGHG 503
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC 534
KA+ LFE+ML +GIKPD VTFV +LSA H G V+ G +YF M ++ I+P +HYAC
Sbjct: 504 NKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIAPMVEHYAC 563
Query: 535 MIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNN 594
M+D+ RA +L +A EF++S + + L C+ +RN EL A EKL+ L
Sbjct: 564 MVDILSRAGKLNEAKEFIESATVDHGLCLWRILLGACKNHRNYELGVYAGEKLVELGSPE 623
Query: 595 KARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKT 654
+ YV L+++Y A G+ + R+R+ M+ N+ GCSW+ ++ +H+F VGD HP+
Sbjct: 624 SSAYVLLSSIYTALGDRENVERVRRIMKARGVNKEPGCSWIELKGLVHVFVVGDNQHPQV 683
Query: 655 NAIYSVLAIFT 665
+ I L + T
Sbjct: 684 DEIRLELELLT 694
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 181/418 (43%), Gaps = 68/418 (16%)
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
C N+ GR LHA ++KT + +S + ++ +++Y+K A +F+ I+
Sbjct: 21 CTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDS-------IN 73
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE---GLKLFVRMG 251
N D VSWN+LI+ + QN + + LF RM
Sbjct: 74 DND------------------------KDDVSWNSLINAFSQNHSSSSSSFAISLFRRMM 109
Query: 252 E-NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
N V N HT A SA L +V K+ HS +K G + +V S ++++YCK
Sbjct: 110 RANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKT--- 166
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
G + +AR+ FD + E+N V W + SGY +
Sbjct: 167 ----------------------------GFVFDARKLFDRMPERNTVSWATMISGYASSD 198
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
+ ++ E + +E + + L +L A ++ G+++H+ ++ G+ +
Sbjct: 199 IADKAVEVF-ELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVA 257
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+ LV MY+KCG++ A F+ +++ + ++ M+ YA G +KA+ LF +M G+
Sbjct: 258 NALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVL 317
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
P T V +++A +V G K +S + + ++D+Y + L A
Sbjct: 318 PSEFTLVGVINACSDLCAVVEG-KQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADA 374
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 108/243 (44%), Gaps = 36/243 (14%)
Query: 266 LSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNS 325
L C +N+ + +H+ +LK G IS+ +V++ +++Y K ++++A ++
Sbjct: 18 LIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTL--------- 68
Query: 326 FSISSMIVGYSLQGNMEEARRHFDSL--TEKNVVVWTALFSGYVKAQNCEAL---FDLLS 380
FDS+ +K+ V W +L + + + + + L
Sbjct: 69 ----------------------FDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFR 106
Query: 381 EFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC 440
+ V+ +A L + A + + + GK+ H+ ++ G D + S+L++MY K
Sbjct: 107 RMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKT 166
Query: 441 GNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAIL 500
G + A +F ER+ V + MI+ YA +KA+ +FE M + + ++L
Sbjct: 167 GFVFDARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVL 226
Query: 501 SAF 503
SA
Sbjct: 227 SAL 229
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 201/654 (30%), Positives = 314/654 (48%), Gaps = 69/654 (10%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACI 67
E + H +K GL N LIH Y++ + K+F+ M ERNV SW
Sbjct: 149 EGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWT------- 201
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFT 127
S++CGY + +A+ LF EM A IR T
Sbjct: 202 ------------------------SLICGYARGD-RPKEAVSLFFEMVEAG--IRPSSVT 234
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
+ ++ C KL ++ G ++ A++ + + V++L+DMY KC + A R+F+ C
Sbjct: 235 MVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECV 294
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
+ + V +NT++S Y + G A E L +
Sbjct: 295 DR---------------------------------NLVLYNTILSNYARQGLAREALAIL 321
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
M + G R + T SA+SA L ++ K H +V++NGL + + I+D+Y KC
Sbjct: 322 DEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKC 381
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
A + L + S +S+ G+ G++E A F+ + E+N V W + SG V
Sbjct: 382 GKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLV 441
Query: 368 KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDK 427
+ E +L E + EG+ D + ++ + AC A K +H YI + G+ D
Sbjct: 442 QKSLFEDAIELFRE-MQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDM 500
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
+L + LVDM+++CG+ A +F ERD+ + I A G+ E A LF +ML +
Sbjct: 501 RLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQ 560
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEK 547
G+KPD V FV +L+A H G VE G F S+ D+ ISP+ +HY CM+DL GRA L +
Sbjct: 561 GVKPDVVLFVQVLTACSHGGQVEQGLHIF-SLMEDHGISPQIEHYGCMVDLLGRAGLLRE 619
Query: 548 AIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAA 607
A + +KS+P E + V+ GS L CR+++N E+A A E++ L +V L+N+YA+
Sbjct: 620 AFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYAS 679
Query: 608 EGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
G W ++ R+R +R + G S V V IH FT GD SHP+ I +L
Sbjct: 680 AGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALML 733
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/476 (24%), Positives = 219/476 (46%), Gaps = 72/476 (15%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
+R L++ E + ++ + GL L + N L+ +Y K + +++LFDE +RN+ +N
Sbjct: 245 LRDLDMGERVCAYIGEL--GLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYN 302
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
TI+S AR +G +AL + EM +
Sbjct: 303 TILS--------NYAR------------------------QGLAREALAILDEM--LQQG 328
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
R D T+ S ++ +L+++ +G+ H ++++ + + +IDMY KC E AC
Sbjct: 329 PRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMAC 388
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
RVF+ + + ++S N++ A R G++E A + F + PE N AV WNT+ISG VQ
Sbjct: 389 RVFDLMSNK-TVVSWNSLTAGFIRNGDVESAWEVFNQIPERN-AVFWNTMISGLVQKSLF 446
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
E+ ++LF M G++ + T SAC L + AK +H+++ KNG+ + +++ +
Sbjct: 447 EDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTAL 506
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
VD++ +C G+ + A + F+ +TE++V WT
Sbjct: 507 VDMFARC-------------------------------GDPQSAMQVFNKMTERDVSAWT 535
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
A N E L ++ + +GV D ++ V +L AC+ + G I + +
Sbjct: 536 AAIGTMAMEGNGEGATGLFNQMLI-QGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMED 594
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFI--ERDLVLYNVMIACYAHHGHE 474
G+ + +VD+ + G + A + ++ D+V +++ AC H E
Sbjct: 595 HGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVE 650
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 13/145 (8%)
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGN---MTYAEIIFQNFIER-----DLVLYNV 463
K++H I + G+ ++ LV+ ++ + + YA F+ F E L + N
Sbjct: 42 KQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKEDVRSDDALFMLNS 101
Query: 464 MIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADY 523
+I Y+ G +AILL+ ML G+ P+ TF +LS + G + S+
Sbjct: 102 LIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVV--- 158
Query: 524 KISPETDHYA--CMIDLYGRANQLE 546
K+ E D + C+I Y ++
Sbjct: 159 KMGLEEDVFIQNCLIHFYAECGHMD 183
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 194/616 (31%), Positives = 315/616 (51%), Gaps = 76/616 (12%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N++I+ +K ++++AR LFD + K +VT+NSM+ GY A G + +AL +F M+
Sbjct: 233 NSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA-ANGLDLEALGMFYSMRL--N 289
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
++R+ E + S + LC L + F QLH +VK ++L+ YSKC +A
Sbjct: 290 YVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDA 349
Query: 180 CRVFE--GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQN 237
R+F+ GC + + VSW +ISG++QN
Sbjct: 350 LRLFKEIGC----------------------------------VGNVVSWTAMISGFLQN 375
Query: 238 GDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVS 297
EE + LF M GVR NE T++ L+A V E+H+ V+K + V
Sbjct: 376 DGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL----PVISPSEVHAQVVKTNYERSSTVG 431
Query: 298 SGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVV 357
+ ++D Y K G +EEA + F + +K++V
Sbjct: 432 TALLDAYVKL-------------------------------GKVEEAAKVFSGIDDKDIV 460
Query: 358 VWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACA-LQAALHPGKEIHA 416
W+A+ +GY + EA + E +TK G+ + +L CA A++ GK+ H
Sbjct: 461 AWSAMLAGYAQTGETEAAIKMFGE-LTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHG 519
Query: 417 YILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
+ ++ + + S L+ MY+K GN+ AE +F+ E+DLV +N MI+ YA HG K
Sbjct: 520 FAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMK 579
Query: 477 AILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMI 536
A+ +F+EM ++ +K D VTF+ + +A H G VE GEKYF+ M D KI+P +H +CM+
Sbjct: 580 ALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMV 639
Query: 537 DLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKA 596
DLY RA QLEKA++ ++++P + I + L CR+++ EL A EK++ ++ + A
Sbjct: 640 DLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSA 699
Query: 597 RYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNA 656
YV L+N+YA G+W E ++RK M + G SW+ V+++ + F GD SHP +
Sbjct: 700 AYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQ 759
Query: 657 IYSVLAIFTGELYEIA 672
IY L + L ++
Sbjct: 760 IYMKLEDLSTRLKDLG 775
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 147/582 (25%), Positives = 247/582 (42%), Gaps = 129/582 (22%)
Query: 67 IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEF 126
+ S L A +LFD SP +D +Y S+L G+ + +G +A +LF+ + + MD
Sbjct: 38 VSSSRLYNAHNLFDKSPGRDRESYISLLFGF-SRDGRTQEAKRLFLNIHRLG--MEMDCS 94
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTS--NDASGFAVSSLIDMYSKCRCYEEACRVFE 184
+S L + L + FGRQLH +K +D S +SL+D Y K +++ +VF+
Sbjct: 95 IFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVS--VGTSLVDTYMKGSNFKDGRKVFD 152
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
E + V+W TLISGY +N +E L
Sbjct: 153 EMKER---------------------------------NVVTWTTLISGYARNSMNDEVL 179
Query: 245 KLFVRMGENGVRWNEHTFASALSACC----GLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
LF+RM G + N TFA+AL G R + ++H+ V+KNGL VS+ +
Sbjct: 180 TLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGL----QVHTVVVKNGLDKTIPVSNSL 235
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL--------- 351
+++Y KC N+ A + V++ + +SMI GY+ G EA F S+
Sbjct: 236 INLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSE 295
Query: 352 ------------------TEK---NVVVWTALFSGYVKA------QNCEALFDLLSEF-- 382
TE+ +VV + LF ++ C A+ D L F
Sbjct: 296 SSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKE 355
Query: 383 --------------------------------VTKEGVVTDALILVILLGACALQAALHP 410
+ ++GV + ++L A + + P
Sbjct: 356 IGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPV---ISP 412
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
E+HA +++ + + + L+D Y K G + A +F ++D+V ++ M+A YA
Sbjct: 413 S-EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQ 471
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSV--EMGE-KYFNSMTADYKISP 527
G E AI +F E+ + GIKP+ TF +IL+ C + MG+ K F+ ++
Sbjct: 472 TGETEAAIKMFGELTKGGIKPNEFTFSSILNV---CAATNASMGQGKQFHGFAIKSRLDS 528
Query: 528 ETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLN 569
+ ++ +Y + +E A E K E+D V S ++
Sbjct: 529 SLCVSSALLTMYAKKGNIESAEEVFKR-QREKDLVSWNSMIS 569
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 120/513 (23%), Positives = 213/513 (41%), Gaps = 114/513 (22%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMP-ERNVFSW 59
++ L E L C V +K G L+ YSK + ++ +LF E+ NV SW
Sbjct: 308 LKELRFTEQLHCSV--VKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSW 365
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
+IS G++ +G E +A+ LF EM+ +
Sbjct: 366 TAMIS-------------------------------GFLQNDGKE-EAVDLFSEMKR--K 391
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
+R +EFT + L L V ++HA +VKT+ + S ++L+D Y K EEA
Sbjct: 392 GVRPNEFTYSVILT----ALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEA 447
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
+VF G ++ ++++ +AM+A + GE E A+K F G+
Sbjct: 448 AKVFSGIDDK-DIVAWSAMLAGYAQTGETEAAIKMF----------------------GE 484
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLR-NVKCAKEIHSWVLKNGLISNPFVSS 298
+G G++ NE TF+S L+ C ++ K+ H + +K+ L S+ VSS
Sbjct: 485 LTKG----------GIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSS 534
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
++ +Y K N+ AE + + ++ S +SMI GY+ G +A + D E
Sbjct: 535 ALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHG---QAMKALDVFKE----- 586
Query: 359 WTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
+ K V D + + + AC + G++ +
Sbjct: 587 ------------------------MKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIM 622
Query: 419 LR-MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER--DLVLYNVMIACYAHHGHEE 475
+R + K+ S +VD+YS+ G + A + +N + ++ AC H E
Sbjct: 623 VRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHK-KTE 681
Query: 476 KAILLFEEMLEKGIKP-DAVTFVAILSAFRHCG 507
L E+++ +KP D+ +V + + + G
Sbjct: 682 LGRLAAEKII--AMKPEDSAAYVLLSNMYAESG 712
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 202/654 (30%), Positives = 324/654 (49%), Gaps = 112/654 (17%)
Query: 30 QLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQ--------------- 74
+L+ Y+ L+E R++FD M ++NV+ WN ++S K D K+
Sbjct: 1 KLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEG 60
Query: 75 -----ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVT 129
A LFD +D++++NSM+ GY+ + G L ++ +M I +D T+
Sbjct: 61 KRSESASELFDKLCDRDVISWNSMISGYV-SNGLTERGLGIYKQMMYLG--IDVDLATII 117
Query: 130 STLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEE 189
S L C K + G+ +H+ +K+S + ++L+DMYSKC + A RVFE E
Sbjct: 118 SVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGER 177
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
N++S W ++I+GY ++G ++ + L +
Sbjct: 178 -NVVS--------------------------------WTSMIAGYTRDGWSDGAIILLQQ 204
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
M + GV+ + S L AC ++ K++H ++ N + SN FV + ++D+Y KC
Sbjct: 205 MEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKC-- 262
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
G+ME A F ++ K+++ W + G +K
Sbjct: 263 -----------------------------GSMEGANSVFSTMVVKDIISWNTMV-GELKP 292
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
D+ + +L ACA +AL GKEIH YILR G D+ +
Sbjct: 293 ---------------------DSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHV 331
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+ LVD+Y KCG + A ++F +DLV + VMIA Y HG+ +AI F EM + GI
Sbjct: 332 ANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGI 391
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
+PD V+F++IL A H G +E G ++F M D+ I P+ +HYACM+DL R L KA
Sbjct: 392 EPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAY 451
Query: 550 EFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEG 609
+F++++P DA I G+ L CR+ + ELA + E++ LE N YV LAN+YA
Sbjct: 452 KFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAE 511
Query: 610 NWAEMGRIRKQMRGMKGNRF-AGCSWVYVEHEIHIFTVG-DVSHPKTNAIYSVL 661
W E+ R+R+++ G KG R GCSW+ ++ +++F G + SHP + I S+L
Sbjct: 512 KWEEVKRMREKI-GKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLL 564
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 209/664 (31%), Positives = 326/664 (49%), Gaps = 83/664 (12%)
Query: 20 GLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPER---NVFSWNTIISACIKSHDLKQAR 76
G N L+ +YS+ L E+ +FDE+ +R +V SWN+I+SA +KS + A
Sbjct: 147 GFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTAL 206
Query: 77 SLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCV 136
LF + L + + +E R D ++ + L C
Sbjct: 207 DLFSK--------------------------MTLIVHEKPTNE--RSDIISIVNILPACG 238
Query: 137 KLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKN 196
L V +++H ++ F ++LID Y+KC E A +VF E +++S N
Sbjct: 239 SLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFN-MMEFKDVVSWN 297
Query: 197 AMVAACCREGEMEMALKTFWRQPELN---DAVSWNTLISGYVQNGDAEEGLKLFVRMGEN 253
AMVA + G + A + F + N D V+W +I+GY Q G + E L +F +M +
Sbjct: 298 AMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFS 357
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS--NPF--------VSSGIVDV 303
G N T S LSAC L EIH++ LKN L++ N F V + ++D+
Sbjct: 358 GSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDM 417
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFD--SLTEKNVVVWTA 361
Y KC + A S+ FD L E+NVV WT
Sbjct: 418 YSKCRSFKAARSI-------------------------------FDDIPLEERNVVTWTV 446
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKE-GVVTDALILVILLGACALQAALHPGKEIHAYILR 420
+ G+ + + L E +++ GV +A + +L ACA AA+ GK+IHAY+LR
Sbjct: 447 MIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR 506
Query: 421 MGVQMDKK---LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
Q D + + L++MYSKCG++ A +F + ++ + + M+ Y HG +A
Sbjct: 507 HH-QYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEA 565
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID 537
+ +F++M + G PD +TF+ +L A HCG V+ G YF+SM+ADY ++P +HYA ID
Sbjct: 566 LDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAID 625
Query: 538 LYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKAR 597
L R +L+KA + +K +P E AV+ + L+ CR++ N ELA A KL+ + N
Sbjct: 626 LLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGS 685
Query: 598 YVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
Y ++N+YA G W ++ RIR M+ + GCSWV + F VGD SHP + I
Sbjct: 686 YTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQI 745
Query: 658 YSVL 661
Y++L
Sbjct: 746 YALL 749
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 120/459 (26%), Positives = 213/459 (46%), Gaps = 56/459 (12%)
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
R+D FT+ L C +L + G H + +++ F ++L+ MYS+C EEA
Sbjct: 114 RLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASM 173
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F+ T Q ++D +SWN+++S +V++ +A
Sbjct: 174 IFDEIT------------------------------QRGIDDVISWNSIVSAHVKSSNAW 203
Query: 242 EGLKLFVRMG------ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF 295
L LF +M R + + + L AC L+ V KE+H ++NG + F
Sbjct: 204 TALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVF 263
Query: 296 VSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKN 355
V + ++D Y KC M A + + ++ S ++M+ GYS GN + A F ++ ++N
Sbjct: 264 VGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKEN 323
Query: 356 V----VVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG 411
+ V WTA+ +GY + ++ + + G + + + ++ +L ACA A G
Sbjct: 324 IPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIF-SGSLPNCVTIISVLSACASLGAFSQG 382
Query: 412 KEIHAYILRM----------GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFI--ERDLV 459
EIHAY L+ G D + + L+DMYSKC + A IF + ER++V
Sbjct: 383 MEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVV 442
Query: 460 LYNVMIACYAHHGHEEKAILLFEEMLEK--GIKPDAVTFVAILSAFRHCGSVEMGEKYFN 517
+ VMI +A +G A+ LF EM+ + G+ P+A T IL A H ++ +G++
Sbjct: 443 TWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHA 502
Query: 518 SMTADYKISPETDHYA-CMIDLYGRANQLEKAIEFMKSI 555
+ ++ A C+I++Y + ++ A S+
Sbjct: 503 YVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSM 541
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 143/564 (25%), Positives = 240/564 (42%), Gaps = 126/564 (22%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H AI+ G L N LI Y+K L+ + K+F+ M ++V SWN +++ +S +
Sbjct: 250 HGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNF 309
Query: 73 KQARSLFDSSPHK----DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
K A LF + + D+VT+ +++ GY + G +AL +F +M + + T+
Sbjct: 310 KAAFELFKNMRKENIPLDMVTWTAVIAGY-SQRGCSHEALNVFRQMIFSGS--LPNCVTI 366
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKT-----SNDASG-----FAVSSLIDMYSKCRCYEE 178
S L+ C L G ++HA+ +K ND G ++LIDMYSKCR ++
Sbjct: 367 ISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKA 426
Query: 179 ACRVFEGCT-EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQN 237
A +F+ EE N+++ M I G+ Q
Sbjct: 427 ARSIFDDIPLEERNVVTWTVM--------------------------------IGGHAQY 454
Query: 238 GDAEEGLKLFVRMGEN--GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP- 294
GD+ + LKLFV M GV N +T + L AC L ++ K+IH++VL++ +
Sbjct: 455 GDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSA 514
Query: 295 -FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
FV++ ++++Y KC +++ A + +++ S +SM+ GY + G EA FD +
Sbjct: 515 YFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKM-- 572
Query: 354 KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
K G V D + +++L AC+ H G
Sbjct: 573 ------------------------------RKAGFVPDDITFLVVLYACS-----HCG-- 595
Query: 414 IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH 473
M + +S M + G AE Y I A G
Sbjct: 596 -----------MVDQGLSYFDSMSADYGLTPRAE------------HYAYAIDLLARFGR 632
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD-HY 532
+KA ++M ++P AV +VA+LSA R +VE+ E N + +++ E D Y
Sbjct: 633 LDKAWKTVKDM---PMEPTAVVWVALLSACRVHSNVELAEHALNKLV---EMNAENDGSY 686
Query: 533 ACMIDLY---GRANQLEKAIEFMK 553
+ ++Y GR + + MK
Sbjct: 687 TLISNIYATAGRWKDVARIRHLMK 710
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 140/306 (45%), Gaps = 39/306 (12%)
Query: 222 NDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEI 281
+ AV WN LI +++ G + + + RM G R + T L AC L + +C
Sbjct: 80 SPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRLDHFTLPHVLKACGELPSYRCGSAF 139
Query: 282 HSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNM 341
H + NG SN F+ + +V +Y +C G++
Sbjct: 140 HGLICCNGFESNVFICNALVAMYSRC-------------------------------GSL 168
Query: 342 EEARRHFDSLTEK---NVVVWTALFSGYVKAQNCEALFDLLSE--FVTKEGVV---TDAL 393
EEA FD +T++ +V+ W ++ S +VK+ N DL S+ + E +D +
Sbjct: 169 EEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDII 228
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF 453
+V +L AC A+ KE+H +R G +D + + L+D Y+KCG M A +F
Sbjct: 229 SIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMM 288
Query: 454 IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
+D+V +N M+A Y+ G+ + A LF+ M ++ I D VT+ A+++ + G
Sbjct: 289 EFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEAL 348
Query: 514 KYFNSM 519
F M
Sbjct: 349 NVFRQM 354
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 193/594 (32%), Positives = 310/594 (52%), Gaps = 70/594 (11%)
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
DL+ AR +FD K++VT+ M+ + GY +A+ LF+EM + ++ D FT+T
Sbjct: 210 DLESARKVFDKMREKNVVTWTLMIT-RLAQYGYNDEAIDLFLEMLVSSGYVP-DRFTLTG 267
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
+++C ++ + G++LH++++++ SL+DMY+KC +EA +VF+G E
Sbjct: 268 LISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMRE-- 325
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA--EEGLKLFV 248
++ +SW L++GYV+ G E +++F
Sbjct: 326 -------------------------------HNVMSWTALVNGYVRGGGGYEREAMRMFS 354
Query: 249 RMG-ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
M + GV N TF+ L AC L + +++H +K GL + V +G+V VY K
Sbjct: 355 NMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAK- 413
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
G ME AR+ FD L EKN+V T + V
Sbjct: 414 ------------------------------SGRMESARKCFDVLFEKNLVSETVVDDTNV 443
Query: 368 KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDK 427
K N + DL E V G + LL A + G++IHA ++++G + D
Sbjct: 444 KDFNLNSEQDLDRE-VEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDL 502
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
+ + L+ MYSKCGN A +F + + +++ + +I +A HG KA+ LF MLE
Sbjct: 503 SVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLET 562
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEK 547
G+KP+ VT++A+LSA H G ++ K+F SM ++ I P +HYACM+DL GR+ L +
Sbjct: 563 GVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSE 622
Query: 548 AIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAA 607
AIEF+ S+P + DA++ +FL CR++RN +L A + +L E ++ A Y+ L+N+YA
Sbjct: 623 AIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPATYILLSNLYAT 682
Query: 608 EGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
EG W ++ IRK M+ + + AG SW+ VE+++H F VGD HPK IY L
Sbjct: 683 EGRWEDVAAIRKNMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPKAQQIYEKL 736
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 115/469 (24%), Positives = 209/469 (44%), Gaps = 74/469 (15%)
Query: 128 VTSTLNL--CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
+TS+L L C++ N G+ LH + ++ ++SLI +YSK A +F+
Sbjct: 53 ITSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQ- 111
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
ME + + D VS++++IS + N + + ++
Sbjct: 112 ---------------------SMENSKR---------DVVSYSSIISCFANNRNCLKAVE 141
Query: 246 LFVRMG-ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI-SNPFVSSGIVDV 303
+F ++ ++GV NE+ F + + AC K + +VLK G S+ V ++D+
Sbjct: 142 MFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDM 201
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
+ K G SL ++E AR+ FD + EKNVV WT +
Sbjct: 202 FVK---------------------------GCSL-ADLESARKVFDKMREKNVVTWTLMI 233
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
+ + + DL E + G V D L L+ CA L GKE+H++++R G+
Sbjct: 234 TRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGL 293
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH--HGHEEKAILLF 481
+D + +LVDMY+KCG + A +F E +++ + ++ Y G+E +A+ +F
Sbjct: 294 VLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMF 353
Query: 482 EEM-LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
M L+ G+ P+ TF +L A + GE+ + T +S ++ +Y
Sbjct: 354 SNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQ-VHGQTIKLGLSAIDCVGNGLVSVYA 412
Query: 541 RANQLEKA-----IEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAE 584
++ ++E A + F K++ +E V+ + + LN +L E E
Sbjct: 413 KSGRMESARKCFDVLFEKNLVSE--TVVDDTNVKDFNLNSEQDLDREVE 459
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 103/483 (21%), Positives = 193/483 (39%), Gaps = 120/483 (24%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H I++GL L L+ +Y+K L++E+RK+FD M E
Sbjct: 285 HSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREH------------------ 326
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYI-NAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
+++++ +++ GY+ GYE +A+++F M + + FT +
Sbjct: 327 -------------NVMSWTALVNGYVRGGGGYEREAMRMFSNML-LQGGVAPNCFTFSGV 372
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L C L + FG Q+H +K A + L+ +Y+K E A + F+ E+ N
Sbjct: 373 LKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEK-N 431
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
L+S+ + + +K F N ++E+ L V
Sbjct: 432 LVSETVV---------DDTNVKDF---------------------NLNSEQDLDREVEYV 461
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
+GV + T+AS LS + + ++IH+ V+K G ++ V++ ++ +Y KC
Sbjct: 462 GSGV--SSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKC---- 515
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
GN E A + F+ + + NV+ WT++ +G+ K
Sbjct: 516 ---------------------------GNKEAALQVFNDMEDCNVITWTSIINGFAKHGF 548
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG-------KEIHAYILRMGVQ 424
+L + + GV + + + +L AC+ + ++ H + RM
Sbjct: 549 ASKALELFYNML-ETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRM--- 604
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD---LVLYNVMIACYAHHG-----HEEK 476
+ + +VD+ + G ++ A I F N + D LV + +C H H K
Sbjct: 605 ---EHYACMVDLLGRSGLLSEA-IEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAK 660
Query: 477 AIL 479
IL
Sbjct: 661 MIL 663
>gi|225437951|ref|XP_002269187.1| PREDICTED: pentatricopeptide repeat-containing protein At1g32415,
mitochondrial-like [Vitis vinifera]
Length = 743
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 216/698 (30%), Positives = 355/698 (50%), Gaps = 61/698 (8%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L+EA + G+ + L+ +SK+ + E+R LF+ MPERNV ++N ++S
Sbjct: 57 LREARHMLDEMPNRGVLDRVVCWTSLLSKFSKNGFIDEARALFEIMPERNVVTYNAMLSG 116
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
++ L A F+ P +++V++ S+LCG NA G +A +LF M E
Sbjct: 117 YVQCGRLSDACRFFEEMPERNVVSWTSLLCGLANA-GRIGEARELFNV---------MPE 166
Query: 126 FTVTSTLNLCVKLLNVG----FGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
V S ++ V L+ G R + VK S + + +I Y++ EEA
Sbjct: 167 RNVVSWNSMLVGLIRSGQLEEARRVFNEMPVK-----SQVSWNVMIAGYAEHSRMEEARV 221
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F+G + N+++ +M++ CR G ++ F + PE N VSW +I G+ NG +
Sbjct: 222 LFDGMGDR-NVVTWTSMISGYCRAGNVQEGYCLFQKMPERN-VVSWTAMIGGFAWNGFYK 279
Query: 242 EGLKLFVRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIH------------------ 282
E L LF+ M G ++ N+ TF S AC G+ + H
Sbjct: 280 EALLLFLEMKGNYDMKPNDETFISLAYACAGIGFPHLGMQFHAHLIINCWDYDDYDGRLF 339
Query: 283 ---------------SWVL--KNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNS 325
+W + +N + N + +++ Y + + A+S+ VR+
Sbjct: 340 KSLIHMYSMFGFMDFAWYIFFRNSMSYNTQSCNSMINGYIRIGQLEKAQSLFDTIPVRDK 399
Query: 326 FSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTK 385
S +SMI GY G + +A F+++ +++ V WT + SG+V+ + L SE K
Sbjct: 400 ISWTSMINGYFNVGQIAKACYLFNNMPDRDAVAWTVMVSGHVQNELFAEATYLFSEMRVK 459
Query: 386 EGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTY 445
GV ILLGA A L G++ H +++ + D L ++L+ MY+KCG +
Sbjct: 460 -GVSPLNSTFSILLGAAGAMAYLDQGRQFHCLLMKTQFEFDLILQNSLISMYAKCGEIGD 518
Query: 446 AEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRH 505
A IF I RDL+ +N MI ++HHG +A+ +FE ML G P++VTF+ ILSA H
Sbjct: 519 AYSIFSKMISRDLISWNSMIMGFSHHGLTSEALKVFEAMLTSGTHPNSVTFLGILSACSH 578
Query: 506 CGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILG 565
G + G + F++M+ + I P+ +HY CM++L GRA ++E+A EF+ +P E D I G
Sbjct: 579 AGLLNQGWELFDAMSDVFAIQPQLEHYVCMVNLLGRAGKVEEAEEFISKLPFEPDLTIWG 638
Query: 566 SFLNVCRLNR-NAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGM 624
+ L VC N +A A ++LL L+ N +V L N++A+ G AE G++RK+M G+
Sbjct: 639 ALLGVCGFGMINTGVARRAAKRLLELDPLNAPAHVVLCNIHASIGQRAEEGQLRKEM-GL 697
Query: 625 KGNR-FAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
KG R GCSW+ ++ E ++F GD HP+ + + S+L
Sbjct: 698 KGVRKVPGCSWILLKGEPYVFLSGDRIHPQADEMLSLL 735
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 156/370 (42%), Gaps = 72/370 (19%)
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
S + C + ++ A+ + + G++ + ++ + K ++ A ++ + R
Sbjct: 46 SQILECLSQQRLREARHMLDEMPNRGVLDRVVCWTSLLSKFSKNGFIDEARALFEIMPER 105
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN---CEALFDLLS 380
N + ++M+ GY G + +A R F+ + E+NVV WT+L G A LF+++
Sbjct: 106 NVVTYNAMLSGYVQCGRLSDACRFFEEMPERNVVSWTSLLCGLANAGRIGEARELFNVMP 165
Query: 381 EFVTKEGVVTDALILVILLGACALQAALHPGKEI----------------------HAYI 418
E VV+ +LV L+ + L+ A E+ A +
Sbjct: 166 E----RNVVSWNSMLVGLIRSGQLEEARRVFNEMPVKSQVSWNVMIAGYAEHSRMEEARV 221
Query: 419 LRMGVQMDKKLI--STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
L G+ D+ ++ ++++ Y + GN+ +FQ ER++V + MI +A +G ++
Sbjct: 222 LFDGMG-DRNVVTWTSMISGYCRAGNVQEGYCLFQKMPERNVVSWTAMIGGFAWNGFYKE 280
Query: 477 AILLFEEMLEKG---IKPDAVTFVAILSAFRHCGSVEMGEKY------------------ 515
A+LLF EM KG +KP+ TF+++ A G +G ++
Sbjct: 281 ALLLFLEM--KGNYDMKPNDETFISLAYACAGIGFPHLGMQFHAHLIINCWDYDDYDGRL 338
Query: 516 FNSMTADY----------------KISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE 559
F S+ Y +S T MI+ Y R QLEKA +IP
Sbjct: 339 FKSLIHMYSMFGFMDFAWYIFFRNSMSYNTQSCNSMINGYIRIGQLEKAQSLFDTIPV-R 397
Query: 560 DAVILGSFLN 569
D + S +N
Sbjct: 398 DKISWTSMIN 407
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 216/724 (29%), Positives = 359/724 (49%), Gaps = 114/724 (15%)
Query: 13 HVQA--IKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSH 70
HV A IK G T +N L+ + + L +RKLFDEMP +N+FS NT+I IKS
Sbjct: 87 HVDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSG 146
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
+L +AR+LFDS + VT+ ++ GY + +A LFIEM I D ++ +
Sbjct: 147 NLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFR-EAFGLFIEM--GRHGIDPDHVSLAT 203
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L+ + +V RQ+H+ ++K D++ +SL+D Y K R
Sbjct: 204 LLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTR---------------- 247
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
+ +A + F PE D+V++N L++GY + G E + LF +M
Sbjct: 248 ----------------SLGLAFQLFNDIPE-RDSVTFNALLTGYSKEGFNREAINLFFKM 290
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
E G R E TFA+ L+A L +++ +++H +V+K + N FV++ ++D Y K + +
Sbjct: 291 QEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRV 350
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEA-------------RRHF--------- 348
A + + S + ++ Y+ G ++E+ RR+F
Sbjct: 351 VEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIA 410
Query: 349 -------------------DSLTEKNVVVWTALFSGYVKA---------------QNCEA 374
D+++E ++V +L Y K Q+
Sbjct: 411 AISLNLDIGRQIHSQTIVTDAISE--ILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVP 468
Query: 375 LFDLLSEFVTKEGVVTDALILVI----------------LLGACALQAALHPGKEIHAYI 418
++S +V K G+ D L L + ++ ACA A+L GK++H++I
Sbjct: 469 WTAMISSYVQK-GLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHI 527
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
+ G + S LVDMY+KCG++ A +FQ R+ V +N +I+ YA +G + +
Sbjct: 528 IGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTL 587
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
LFEEM+ G++PD+V+ ++IL A HCG VE G +YF+SMT YK+ P+ +HYA ID+
Sbjct: 588 RLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDM 647
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG-NNKAR 597
R + ++A + M +P E D ++ S LN C +++N ELA +A +L ++ + A
Sbjct: 648 LCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAP 707
Query: 598 YVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
YV ++N+YAA G W +G+++K MR + SWV ++H+ H+FT D +HP+ I
Sbjct: 708 YVTMSNIYAAAGEWDNVGKVKKAMRERGVKKVPAYSWVEIKHKTHVFTANDKTHPQMREI 767
Query: 658 YSVL 661
L
Sbjct: 768 MKKL 771
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 117/272 (43%), Gaps = 69/272 (25%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTI 62
SLNL H Q I + N L+ +Y+K E+ ++F ++ ++ W +
Sbjct: 413 SLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAM 472
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
IS+ ++ +G D LKLF+EMQ A I
Sbjct: 473 ISSYVQ--------------------------------KGLHEDGLKLFVEMQRAK--IG 498
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
D T S + C L ++ G+QLH+ ++ + ++ F+ S+L+DMY+KC
Sbjct: 499 ADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKC--------- 549
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
G ++ AL+ F P + ++VSWN LIS Y QNGD +
Sbjct: 550 -----------------------GSIKDALQMFQEMP-VRNSVSWNALISAYAQNGDGDC 585
Query: 243 GLKLFVRMGENGVRWNEHTFASALSAC--CGL 272
L+LF M +G++ + + S L AC CGL
Sbjct: 586 TLRLFEEMVRSGLQPDSVSLLSILCACSHCGL 617
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 209/664 (31%), Positives = 326/664 (49%), Gaps = 83/664 (12%)
Query: 20 GLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPER---NVFSWNTIISACIKSHDLKQAR 76
G N L+ +YS+ L E+ +FDE+ +R +V SWN+I+SA +KS + A
Sbjct: 40 GFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTAL 99
Query: 77 SLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCV 136
LF + L + + +E R D ++ + L C
Sbjct: 100 DLFSK--------------------------MTLIVHEKPTNE--RSDIISIVNILPACG 131
Query: 137 KLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKN 196
L V +++H ++ F ++LID Y+KC E A +VF E +++S N
Sbjct: 132 SLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFN-MMEFKDVVSWN 190
Query: 197 AMVAACCREGEMEMALKTFWRQPELN---DAVSWNTLISGYVQNGDAEEGLKLFVRMGEN 253
AMVA + G + A + F + N D V+W +I+GY Q G + E L +F +M +
Sbjct: 191 AMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFS 250
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS--NPF--------VSSGIVDV 303
G N T S LSAC L EIH++ LKN L++ N F V + ++D+
Sbjct: 251 GSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDM 310
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFD--SLTEKNVVVWTA 361
Y KC + A S+ FD L E+NVV WT
Sbjct: 311 YSKCRSFKAARSI-------------------------------FDDIPLEERNVVTWTV 339
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKE-GVVTDALILVILLGACALQAALHPGKEIHAYILR 420
+ G+ + + L E +++ GV +A + +L ACA AA+ GK+IHAY+LR
Sbjct: 340 MIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR 399
Query: 421 MGVQMDKK---LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
Q D + + L++MYSKCG++ A +F + ++ + + M+ Y HG +A
Sbjct: 400 HH-QYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEA 458
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID 537
+ +F++M + G PD +TF+ +L A HCG V+ G YF+SM+ADY ++P +HYA ID
Sbjct: 459 LDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAID 518
Query: 538 LYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKAR 597
L R +L+KA + +K +P E AV+ + L+ CR++ N ELA A KL+ + N
Sbjct: 519 LLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGS 578
Query: 598 YVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
Y ++N+YA G W ++ RIR M+ + GCSWV + F VGD SHP + I
Sbjct: 579 YTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQI 638
Query: 658 YSVL 661
Y++L
Sbjct: 639 YALL 642
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 120/459 (26%), Positives = 213/459 (46%), Gaps = 56/459 (12%)
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
R+D FT+ L C +L + G H + +++ F ++L+ MYS+C EEA
Sbjct: 7 RLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASM 66
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F+ T Q ++D +SWN+++S +V++ +A
Sbjct: 67 IFDEIT------------------------------QRGIDDVISWNSIVSAHVKSSNAW 96
Query: 242 EGLKLFVRMG------ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF 295
L LF +M R + + + L AC L+ V KE+H ++NG + F
Sbjct: 97 TALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVF 156
Query: 296 VSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKN 355
V + ++D Y KC M A + + ++ S ++M+ GYS GN + A F ++ ++N
Sbjct: 157 VGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKEN 216
Query: 356 V----VVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG 411
+ V WTA+ +GY + ++ + + G + + + ++ +L ACA A G
Sbjct: 217 IPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIF-SGSLPNCVTIISVLSACASLGAFSQG 275
Query: 412 KEIHAYILRM----------GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFI--ERDLV 459
EIHAY L+ G D + + L+DMYSKC + A IF + ER++V
Sbjct: 276 MEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVV 335
Query: 460 LYNVMIACYAHHGHEEKAILLFEEMLEK--GIKPDAVTFVAILSAFRHCGSVEMGEKYFN 517
+ VMI +A +G A+ LF EM+ + G+ P+A T IL A H ++ +G++
Sbjct: 336 TWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHA 395
Query: 518 SMTADYKISPETDHYA-CMIDLYGRANQLEKAIEFMKSI 555
+ ++ A C+I++Y + ++ A S+
Sbjct: 396 YVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSM 434
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 143/564 (25%), Positives = 240/564 (42%), Gaps = 126/564 (22%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H AI+ G L N LI Y+K L+ + K+F+ M ++V SWN +++ +S +
Sbjct: 143 HGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNF 202
Query: 73 KQARSLFDSSPHK----DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
K A LF + + D+VT+ +++ GY + G +AL +F +M + + T+
Sbjct: 203 KAAFELFKNMRKENIPLDMVTWTAVIAGY-SQRGCSHEALNVFRQMIFSGS--LPNCVTI 259
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKT-----SNDASG-----FAVSSLIDMYSKCRCYEE 178
S L+ C L G ++HA+ +K ND G ++LIDMYSKCR ++
Sbjct: 260 ISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKA 319
Query: 179 ACRVFEGCT-EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQN 237
A +F+ EE N+++ M I G+ Q
Sbjct: 320 ARSIFDDIPLEERNVVTWTVM--------------------------------IGGHAQY 347
Query: 238 GDAEEGLKLFVRMGEN--GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP- 294
GD+ + LKLFV M GV N +T + L AC L ++ K+IH++VL++ +
Sbjct: 348 GDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSA 407
Query: 295 -FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
FV++ ++++Y KC +++ A + +++ S +SM+ GY + G EA FD +
Sbjct: 408 YFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKM-- 465
Query: 354 KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
K G V D + +++L AC+ H G
Sbjct: 466 ------------------------------RKAGFVPDDITFLVVLYACS-----HCG-- 488
Query: 414 IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH 473
M + +S M + G AE Y I A G
Sbjct: 489 -----------MVDQGLSYFDSMSADYGLTPRAE------------HYAYAIDLLARFGR 525
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD-HY 532
+KA ++M ++P AV +VA+LSA R +VE+ E N + +++ E D Y
Sbjct: 526 LDKAWKTVKDM---PMEPTAVVWVALLSACRVHSNVELAEHALNKLV---EMNAENDGSY 579
Query: 533 ACMIDLY---GRANQLEKAIEFMK 553
+ ++Y GR + + MK
Sbjct: 580 TLISNIYATAGRWKDVARIRHLMK 603
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 12/135 (8%)
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
+ G D L +L AC + G H I G + + + + LV MYS+CG++
Sbjct: 3 RAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLE 62
Query: 445 YAEIIFQNFIER---DLVLYNVMIACYAHHGHEEKAILLFEEML----EKGI--KPDAVT 495
A +IF +R D++ +N +++ + + A+ LF +M EK + D ++
Sbjct: 63 EASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIIS 122
Query: 496 FVAILSAFRHCGSVE 510
V IL A CGS++
Sbjct: 123 IVNILPA---CGSLK 134
>gi|15226463|ref|NP_179705.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206523|sp|Q9SKQ4.1|PP167_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g21090
gi|4803934|gb|AAD29807.1| unknown protein [Arabidopsis thaliana]
gi|330252028|gb|AEC07122.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 597
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 187/545 (34%), Positives = 301/545 (55%), Gaps = 7/545 (1%)
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS-LIDMYSKCRCYEEA 179
IR+ + S L C ++ G+ +H + T +S+ LI MY KC +A
Sbjct: 42 IRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDA 101
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
C+VF+ NL S N MV+ + G + A F PE D VSWNT++ GY Q+G+
Sbjct: 102 CKVFDQMHLR-NLYSWNNMVSGYVKSGMLVRARVVFDSMPE-RDVVSWNTMVIGYAQDGN 159
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
E L + +G+++NE +FA L+AC R ++ ++ H VL G +SN +S
Sbjct: 160 LHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCS 219
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
I+D Y KC M A+ V++ +++I GY+ G+ME A + F + EKN V W
Sbjct: 220 IIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSW 279
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
TAL +GYV+ + DL + + GV + L A A A+L GKEIH Y++
Sbjct: 280 TALIAGYVRQGSGNRALDLFRKMIAL-GVKPEQFTFSSCLCASASIASLRHGKEIHGYMI 338
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER-DLVLYNVMIACYAHHGHEEKAI 478
R V+ + +IS+L+DMYSK G++ +E +F+ ++ D V +N MI+ A HG KA+
Sbjct: 339 RTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKAL 398
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
+ ++M++ ++P+ T V IL+A H G VE G ++F SMT + I P+ +HYAC+IDL
Sbjct: 399 RMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDL 458
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARY 598
GRA ++ + ++ +P E D I + L VCR++ N EL +A ++L++L+ + A Y
Sbjct: 459 LGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPY 518
Query: 599 VQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVS--HPKTNA 656
+ L+++YA G W + ++R M+ + N+ SW+ +E ++ FTV D S H +
Sbjct: 519 ILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEE 578
Query: 657 IYSVL 661
IY +L
Sbjct: 579 IYFIL 583
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 134/502 (26%), Positives = 245/502 (48%), Gaps = 49/502 (9%)
Query: 25 TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPH 84
T+ +N LI +Y K ++ K+FD+M RN++SWN ++S +KS L +AR +FDS P
Sbjct: 82 TLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPE 141
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
+D+V++N+M+ GY +G +AL + E + + I+ +EF+ L CVK +
Sbjct: 142 RDVVSWNTMVIGYAQ-DGNLHEALWFYKEFRRSG--IKFNEFSFAGLLTACVKSRQLQLN 198
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT-EEVNLISKNAMVAACC 203
RQ H ++ ++ S+ID Y+KC E A R F+ T +++++ + +++
Sbjct: 199 RQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWT--TLISGYA 256
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
+ G+ME A K F PE N VSW LI+GYV+ G L LF +M GV+ + TF+
Sbjct: 257 KLGDMEAAEKLFCEMPEKN-PVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFS 315
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
S L A + +++ KEIH ++++ + N V S ++D+Y K
Sbjct: 316 SCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSK----------------- 358
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEK-NVVVWTALFSGYVKAQNCEALFDLLSEF 382
G++E + R F +K + V W + S + +L +
Sbjct: 359 --------------SGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDM 404
Query: 383 VTKEGVVTDALILVILLGACALQAALHPG-KEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
+ K V + LV++L AC+ + G + + ++ G+ D++ + L+D+ + G
Sbjct: 405 I-KFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAG 463
Query: 442 NMTYAEI---IFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD-AVTFV 497
+ E+ I + E D ++N ++ HG+EE +E+++ + P+ + ++
Sbjct: 464 --CFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIK--LDPESSAPYI 519
Query: 498 AILSAFRHCGSVEMGEKYFNSM 519
+ S + G E+ EK M
Sbjct: 520 LLSSIYADHGKWELVEKLRGVM 541
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 155/374 (41%), Gaps = 34/374 (9%)
Query: 228 NTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLK 287
+ +S + + + + + + G+R AS L C +++K K IH +
Sbjct: 15 QSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKI 74
Query: 288 NGLI-SNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARR 346
G N +S+ ++ +Y KC A + +RN +S ++M+ GY G + AR
Sbjct: 75 TGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARV 134
Query: 347 HFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQA 406
FDS+ E++VV W + GY + N EF + G+ + LL AC
Sbjct: 135 VFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEF-RRSGIKFNEFSFAGLLTACVKSR 193
Query: 407 ALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC-------------------------- 440
L ++ H +L G + L +++D Y+KC
Sbjct: 194 QLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLIS 253
Query: 441 -----GNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVT 495
G+M AE +F E++ V + +IA Y G +A+ LF +M+ G+KP+ T
Sbjct: 254 GYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFT 313
Query: 496 FVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSI 555
F + L A S+ G++ M + P + +ID+Y ++ LE + +
Sbjct: 314 FSSCLCASASIASLRHGKEIHGYMIRT-NVRPNAIVISSLIDMYSKSGSLEASERVFRIC 372
Query: 556 PTEEDAVILGSFLN 569
+ D V + ++
Sbjct: 373 DDKHDCVFWNTMIS 386
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 134/258 (51%), Gaps = 13/258 (5%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H Q + AG + + +I Y+K + +++ FDEM +++ W T+IS K D+
Sbjct: 202 HGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDM 261
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+ A LF P K+ V++ +++ GY+ +G AL LF +M + ++ ++FT +S L
Sbjct: 262 EAAEKLFCEMPEKNPVSWTALIAGYVR-QGSGNRALDLFRKMIALG--VKPEQFTFSSCL 318
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ ++ G+++H +M++T+ + +SSLIDMYSK E + RVF C ++ +
Sbjct: 319 CASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDC 378
Query: 193 ISKNAMVAACCREGEMEMALK------TFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
+ N M++A + G AL+ F QP V +++ +G EEGL+
Sbjct: 379 VFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLV---VILNACSHSGLVEEGLRW 435
Query: 247 FVRMG-ENGVRWNEHTFA 263
F M ++G+ ++ +A
Sbjct: 436 FESMTVQHGIVPDQEHYA 453
>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
Length = 706
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 198/599 (33%), Positives = 303/599 (50%), Gaps = 68/599 (11%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
NT+++ K L AR LFD P DLV +N M+ GY+ G+ DA LF EM SA
Sbjct: 150 NTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQ-NGFMDDASMLFNEMISAG- 207
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
I+ D T TS L + ++ +++H ++V+ + S+LID+Y KCR A
Sbjct: 208 -IKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMA 266
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
C++F NL +K D V + +ISGYV NG
Sbjct: 267 CKMF-------NLSTKF--------------------------DIVIYTAMISGYVLNGM 293
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
++ L++F + + + N TF+S L AC GL +K +E+H +++KN L V S
Sbjct: 294 NKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSA 353
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
I+++Y KC ++ A + ++++ +S+I +S G EEA F +
Sbjct: 354 IMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMG------- 406
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
EGV D + + L ACA ALH GKEIH +++
Sbjct: 407 -------------------------MEGVKYDCVTVSAALSACANIPALHYGKEIHGFMI 441
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
+ + D +S L++MY+KCG + A ++F E++ V +N +IA Y +HG+ ++
Sbjct: 442 KGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLA 501
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
LF MLE+GI+PD +TF+ ILS+ H G VE G +YF MT +Y I + +HYACM DL+
Sbjct: 502 LFHNMLEEGIQPDHITFLTILSSCGHAGQVEDGVRYFRCMTEEYGIPAQMEHYACMADLF 561
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYV 599
GRA L++A E + S+P A + G+ L CR++ N ELA A LL LE N Y+
Sbjct: 562 GRAGHLDEAFEVITSMPFPPAASVWGTLLGACRVHGNVELAEVASRYLLDLEPKNSGYYL 621
Query: 600 QLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
L +V A G W + +I+ M+ + GCSW+ V + +F D SHP++ IY
Sbjct: 622 LLTHVLADAGKWRSVHKIQHLMKERGVQKVPGCSWIEVNNTTCVFFAADGSHPESPQIY 680
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 134/499 (26%), Positives = 245/499 (49%), Gaps = 75/499 (15%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
+ ++F +++I + ++ AR FD KD V +N M+ GY+ G A+KLF
Sbjct: 42 DLDMFVASSLIKLYADNGCIEDARRFFDKMIDKDCVLWNVMINGYVQC-GESDSAIKLFK 100
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
+M S++ + D T L++ V +GRQLH +V++ D ++L+ +YSK
Sbjct: 101 DMMSSEA--KPDSVTFACVLSISCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSK 158
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
R +A ++F+ P++ D V WN +I
Sbjct: 159 GRQLGDARKLFD--------------------------------MMPQI-DLVVWNRMIG 185
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
GYVQNG ++ LF M G++ + TF S L + ++K KEIH +++++G+I
Sbjct: 186 GYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVIL 245
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
+ +++S ++D+Y KC + A M F+ T
Sbjct: 246 DVYLNSALIDLYFKCRDAVMACKM-------------------------------FNLST 274
Query: 353 EKNVVVWTALFSGYV-KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG 411
+ ++V++TA+ SGYV N +AL + ++ ++ ++ +AL +L ACA AA+ G
Sbjct: 275 KFDIVIYTAMISGYVLNGMNKDAL--EIFRWLLQKKMIPNALTFSSILPACAGLAAIKLG 332
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
+E+H YI++ ++ + S +++MY+KCG + A +IF +D + +N +I ++
Sbjct: 333 RELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQD 392
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH 531
G E+AI LF +M +G+K D VT A LSA + ++ G++ M K + E+D
Sbjct: 393 GKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYGKEIHGFMI---KGAFESDL 449
Query: 532 Y--ACMIDLYGRANQLEKA 548
+ + +I++Y + +L A
Sbjct: 450 FDMSALINMYAKCGKLNIA 468
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 182/391 (46%), Gaps = 65/391 (16%)
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
D++T + C L NV G+ + +++ D F SSLI +Y+ C E+A R F
Sbjct: 9 DKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDARRFF 68
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
+ +I K D V WN +I+GYVQ G+++
Sbjct: 69 D------KMIDK---------------------------DCVLWNVMINGYVQCGESDSA 95
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
+KLF M + + + TFA LS C V+ +++H V+++GL P V + +V V
Sbjct: 96 IKLFKDMMSSEAKPDSVTFACVLSISCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTV 155
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y K + +AR+ FD + + ++VVW +
Sbjct: 156 YSKGRQLG-------------------------------DARKLFDMMPQIDLVVWNRMI 184
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
GYV+ + L +E ++ G+ D++ L + A ++L KEIH YI+R GV
Sbjct: 185 GGYVQNGFMDDASMLFNEMISA-GIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGV 243
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
+D L S L+D+Y KC + A +F + D+V+Y MI+ Y +G + A+ +F
Sbjct: 244 ILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRW 303
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
+L+K + P+A+TF +IL A ++++G +
Sbjct: 304 LLQKKMIPNALTFSSILPACAGLAAIKLGRE 334
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 114/503 (22%), Positives = 210/503 (41%), Gaps = 105/503 (20%)
Query: 15 QAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPER----NVFSWNTIISACIKSH 70
+ I AG+ +IT + ++ + L++ +++ + +V+ + +I K
Sbjct: 202 EMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYLNSALIDLYFKCR 261
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
D A +F+ S D+V Y +M+ GY+ G DAL++F + + + + T +S
Sbjct: 262 DAVMACKMFNLSTKFDIVIYTAMISGYV-LNGMNKDALEIFRWL--LQKKMIPNALTFSS 318
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L C L + GR+LH +++K + S++++MY+KC
Sbjct: 319 ILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKC----------------- 361
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
G +++A F R + DA+ WN++I+ + Q+G EE + LF +M
Sbjct: 362 ---------------GRLDLAHLIFGRI-SIKDAICWNSIITSFSQDGKPEEAIYLFRQM 405
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
G GV+++ T ++ALSAC + + KEIH +++K S+ F S ++++Y KC +
Sbjct: 406 GMEGVKYDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKL 465
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
N A + L +N + +S+I Y G + ++ F ++ E
Sbjct: 466 NIARLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLE----------------- 508
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
EG+ D + + +L +C HA + GV+
Sbjct: 509 ---------------EGIQPDHITFLTILSSCG-----------HAGQVEDGVR------ 536
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
Y +C Y I + Y M + GH ++A FE +
Sbjct: 537 ------YFRCMTEEYG-------IPAQMEHYACMADLFGRAGHLDEA---FEVITSMPFP 580
Query: 491 PDAVTFVAILSAFRHCGSVEMGE 513
P A + +L A R G+VE+ E
Sbjct: 581 PAASVWGTLLGACRVHGNVELAE 603
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 151/321 (47%), Gaps = 34/321 (10%)
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA 313
GV +++TF + C GL NV+ K I +L+ G + FV+S ++ +Y
Sbjct: 5 GVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYAD------- 57
Query: 314 ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE 373
G +E+ARR FD + +K+ V+W + +GYV+ +
Sbjct: 58 ------------------------NGCIEDARRFFDKMIDKDCVLWNVMINGYVQCGESD 93
Query: 374 ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL 433
+ L + ++ E D++ +L +A + G+++H ++R G+ + +TL
Sbjct: 94 SAIKLFKDMMSSEA-KPDSVTFACVLSISCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTL 152
Query: 434 VDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDA 493
V +YSK + A +F + DLV++N MI Y +G + A +LF EM+ GIKPD+
Sbjct: 153 VTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDS 212
Query: 494 VTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMK 553
+TF + L + S++ K + + + + + +IDLY + A + M
Sbjct: 213 ITFTSFLPSLAESSSLKQ-IKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACK-MF 270
Query: 554 SIPTEEDAVILGSFLNVCRLN 574
++ T+ D VI + ++ LN
Sbjct: 271 NLSTKFDIVIYTAMISGYVLN 291
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 205/622 (32%), Positives = 325/622 (52%), Gaps = 75/622 (12%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
+V+ N +++ ++ + A +FD KD +T+NSM+ G+ G +AL+ F +
Sbjct: 146 DVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQ-NGLYNEALQFFCGL 204
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
Q D +++ DE ++ S L +L + G+++HA+ +K D++ ++LIDMYSKC
Sbjct: 205 Q--DANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCC 262
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
C A VF+ +I+K D +SW T+I+ Y
Sbjct: 263 CVAYAGLVFD------KMINK---------------------------DLISWTTVIAAY 289
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
QN E LKL ++ G+ + S L AC GLR + AKE+H + LK GL S+
Sbjct: 290 AQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGL-SDL 348
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
+ + I+DVY C N+NYA M F+S+ K
Sbjct: 349 MMQNMIIDVYADCGNINYATRM-------------------------------FESIKCK 377
Query: 355 NVVVWTALFSGYVK---AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG 411
+VV WT++ S YV A +F L+ E V D++ LV +L A A +AL+ G
Sbjct: 378 DVVSWTSMISCYVHNGLANEALGVFYLMKE----TSVEPDSITLVSILSAAASLSALNKG 433
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
KEIH +I R G ++ +++LVDMY+ CG++ A +F + LVL+ MI Y H
Sbjct: 434 KEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMH 493
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH 531
G + A+ LF M ++ + PD +TF+A+L A H G + G++ +M Y++ P +H
Sbjct: 494 GRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLETMKCKYQLEPWPEH 553
Query: 532 YACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLE 591
YAC++DL GRAN LE+A F+KS+ E A + +FL CR++ N +L A +KLL L+
Sbjct: 554 YACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFLGACRIHSNKKLGEIAAQKLLDLD 613
Query: 592 GNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSH 651
++ YV ++NV+AA G W ++ +R +M+G + GCSW+ V +++H F V D SH
Sbjct: 614 PDSPGSYVLISNVFAASGRWKDVEEVRMRMKGGGLKKNPGCSWIEVGNKVHTFLVRDKSH 673
Query: 652 PKTNAIYSVLAIFTGELYEIAG 673
P++ IY LA T +L + G
Sbjct: 674 PESYKIYQKLAQITEKLEKEGG 695
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 128/534 (23%), Positives = 221/534 (41%), Gaps = 119/534 (22%)
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
+ D FT L C + ++ G ++H ++K D+ F +SL+ MY+KC A
Sbjct: 6 VPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGAR 65
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
++F+ E +++S WN++IS Y NG
Sbjct: 66 KLFDRMNERNDVVS--------------------------------WNSIISAYSLNGQC 93
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
E L LF M + GV N +T +AL AC K EIH+ +LK+ + + +V++ +
Sbjct: 94 MEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANAL 153
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
V ++ + M+YA R FD L EK+ + W
Sbjct: 154 VAMHVRFGKMSYAA-------------------------------RIFDELDEKDNITWN 182
Query: 361 ALFSGYVKAQNCEALFDLLSEF---VTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
++ +G+ + L++ +F + + D + L+ +L A L GKEIHAY
Sbjct: 183 SMIAGFTQ----NGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAY 238
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
++ + + ++ +TL+DMYSKC + YA ++F I +DL+ + +IA YA + +A
Sbjct: 239 AMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEA 298
Query: 478 ILLFEEMLEKGIKPDAV----TFVA------------------------------ILSAF 503
+ L ++ KG+ D + T +A I+ +
Sbjct: 299 LKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLSDLMMQNMIIDVY 358
Query: 504 RHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY---GRANQLEKAIEFMKSIPTEED 560
CG++ + F S+ +S + MI Y G AN+ MK E D
Sbjct: 359 ADCGNINYATRMFESIKCKDVVS-----WTSMISCYVHNGLANEALGVFYLMKETSVEPD 413
Query: 561 AVILGSF----LNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGN 610
++ L S ++ LN+ E+ G K LEG+ L ++YA G+
Sbjct: 414 SITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVN---SLVDMYACCGS 464
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 166/391 (42%), Gaps = 66/391 (16%)
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA 313
GV ++ TF L AC + ++ EIH ++K G S FV++ +V +Y KC +
Sbjct: 5 GVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND---- 60
Query: 314 ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKN-VVVWTALFSGYVKAQNC 372
I+G AR+ FD + E+N VV W ++ S Y C
Sbjct: 61 ------------------ILG---------ARKLFDRMNERNDVVSWNSIISAYSLNGQC 93
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
L E + K GV + LV L AC + G EIHA IL+ +D + +
Sbjct: 94 MEALGLFRE-MQKAGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANA 152
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
LV M+ + G M+YA IF E+D + +N MIA + +G +A+ F + + +KPD
Sbjct: 153 LVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPD 212
Query: 493 AVTFVAILSAFRHCGSVEMGEKY------------------------------FNSMTAD 522
V+ ++IL+A G + G++ + + D
Sbjct: 213 EVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFD 272
Query: 523 YKISPETDHYACMIDLYGRANQLEKAIEFMKSIPT---EEDAVILGSFLNVCRLNRNAEL 579
I+ + + +I Y + N +A++ ++ + T + D +++GS L C R
Sbjct: 273 KMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSH 332
Query: 580 AGEAEEKLLRLEGNNKARYVQLANVYAAEGN 610
A E L+ ++ + +VYA GN
Sbjct: 333 AKEVHGYTLKRGLSDLMMQNMIIDVYADCGN 363
>gi|357464861|ref|XP_003602712.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
gi|355491760|gb|AES72963.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
Length = 867
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 204/643 (31%), Positives = 328/643 (51%), Gaps = 50/643 (7%)
Query: 38 HNLLRESRKLFDEMPE--RNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLC 95
H R+ + PE +V N ++S +K K+A SLF + +DLV++N+++
Sbjct: 261 HRCGRQIHSYVLQWPELSADVSVCNALLSFYLKVGRTKEAESLFWAMDARDLVSWNTIIA 320
Query: 96 GY-INAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKT 154
GY +N E ++ L +F + S E + +D T+ S L C +L N+ G+Q+HA++++
Sbjct: 321 GYALNGEWLKS--LHVFGNLVSL-EMLLLDSVTMVSILPACAQLDNLQAGKQVHAYILRH 377
Query: 155 S---NDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMA 211
D S A ++L+ Y+KC EEA F ++IS+
Sbjct: 378 PFLFEDTS--AGNALVSFYAKCGYIEEAYHTF-------SMISRK--------------- 413
Query: 212 LKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCG 271
D +SWN+++ + + L L M + +R + T + + C
Sbjct: 414 -----------DLISWNSILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVTILTIIHFCAS 462
Query: 272 LRNVKCAKEIHSWVLKNGLI---SNPFVSSGIVDVYCKCENMNYAESMLL-LKGVRNSFS 327
L VK KEIH + +++G + + P V + I+D Y KC N+ YA M L RN +
Sbjct: 463 LLRVKKVKEIHGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYANKMFQNLSEKRNLVT 522
Query: 328 ISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEG 387
+S+I GY G+ +A F ++E ++ W + Y + E +L + T +G
Sbjct: 523 CNSLISGYVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALELFLKLQT-QG 581
Query: 388 VVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAE 447
+ D + ++ L+ C A++H ++ H YI+R + D L TL+D Y+KCG + YA
Sbjct: 582 MKPDVVTIMSLIPVCTQMASVHLLRQCHGYIIRSSFE-DLHLKGTLLDAYAKCGIIGYAY 640
Query: 448 IIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCG 507
IFQ+ +++DLV++ MI YA HG EKA+ F ML GIKPD V F +ILSA H G
Sbjct: 641 KIFQSSVDKDLVMFTAMIGGYAMHGMSEKALETFSHMLNMGIKPDHVIFTSILSACSHAG 700
Query: 508 SVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSF 567
+ G K F+S+ + + P + +AC++DL R + +A F+ IP E +A I G+
Sbjct: 701 RIAEGLKIFDSIEKIHGMKPTIEQFACVVDLLARGGHVSEAYSFVTKIPIEANANIWGTL 760
Query: 568 LNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGN 627
L C+ EL +KL ++E N+ Y+ L+N+YAA+ W + +RK MR
Sbjct: 761 LGACKTYHEVELGRIVADKLFKIEANDIGNYIVLSNLYAADDRWDGVMEVRKMMRNKDLK 820
Query: 628 RFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYE 670
+ AGCSW+ VE +IF VGD SHP+ N IYS L ++ E
Sbjct: 821 KPAGCSWIEVERTNNIFVVGDCSHPQRNLIYSTLCTLDQQVKE 863
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 154/651 (23%), Positives = 262/651 (40%), Gaps = 170/651 (26%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K G +T+ L+++Y+K +L + KLFD+ C
Sbjct: 60 HSYVVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLFDQFGR------------C------ 101
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
D V +N +L GY + +AD +K+F M S+ E + T+ + L
Sbjct: 102 -------------DPVIWNIVLSGYSRSGKNDADVMKVFRAMHSSGE-VMPSSVTIATVL 147
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYE-EACRVFEGCTEEVN 191
+C + N+ G+ +H +++K+ + FA ++L+ MY+KC +A VF+ +
Sbjct: 148 PVCARSGNLNGGKSVHGYVIKSGFEMDTFAGNALVSMYAKCGLVACDAYAVFD------S 201
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
+I K D VSWN +I+G +NG +E LF M
Sbjct: 202 IIHK---------------------------DVVSWNAMIAGLAENGLLKEAFSLFSLMM 234
Query: 252 ENGVRWNEHTFASALSACCGL-RNV--KCAKEIHSWVLK-NGLISNPFVSSGIVDVYCKC 307
+ V+ N T A+ L C N+ +C ++IHS+VL+ L ++ V + ++ Y K
Sbjct: 235 KGSVKPNYATVANILPVCASFDENIAHRCGRQIHSYVLQWPELSADVSVCNALLSFYLKV 294
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
AES+ R+ S +++I GY+L G ++ F +L
Sbjct: 295 GRTKEAESLFWAMDARDLVSWNTIIAGYALNGEWLKSLHVFGNL---------------- 338
Query: 368 KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM-D 426
V+ E ++ D++ +V +L ACA L GK++HAYILR D
Sbjct: 339 ---------------VSLEMLLLDSVTMVSILPACAQLDNLQAGKQVHAYILRHPFLFED 383
Query: 427 KKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
+ LV Y+KCG + A F +DL+ +N ++ + H + + L ML+
Sbjct: 384 TSAGNALVSFYAKCGYIEEAYHTFSMISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLK 443
Query: 487 KGIKPDAVTFV--------------------------------------AILSAFRHCGS 508
I+PD+VT + AIL A+ CG+
Sbjct: 444 LDIRPDSVTILTIIHFCASLLRVKKVKEIHGYSIRSGSLLCATAPTVGNAILDAYSKCGN 503
Query: 509 VEMGEKYF-------NSMTADYKIS------------------PETD--HYACMIDLYGR 541
+E K F N +T + IS ETD + M+ +Y
Sbjct: 504 IEYANKMFQNLSEKRNLVTCNSLISGYVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAE 563
Query: 542 ANQLEKAIEFMKSIPTE---EDAVILGSFLNVCRLNRNAELAGEAEEKLLR 589
+ E+A+E + T+ D V + S + VC + L + ++R
Sbjct: 564 NDCPEQALELFLKLQTQGMKPDVVTIMSLIPVCTQMASVHLLRQCHGYIIR 614
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 142/648 (21%), Positives = 256/648 (39%), Gaps = 181/648 (27%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLR-ESRKLFDEMPERNVFSWN 60
RS NL H IK+G + T N L+ +Y+K L+ ++ +FD + ++V SWN
Sbjct: 152 RSGNLNGGKSVHGYVIKSGFEMDTFAGNALVSMYAKCGLVACDAYAVFDSIIHKDVVSWN 211
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
+I+ ++ LK+A SLF + M+ +
Sbjct: 212 AMIAGLAENGLLKEAFSLFS-------------------------------LMMKGS--- 237
Query: 121 IRMDEFTVTSTLNLCVKL-LNVGF--GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYE 177
++ + TV + L +C N+ GRQ+H+++++ ++ +V
Sbjct: 238 VKPNYATVANILPVCASFDENIAHRCGRQIHSYVLQWPELSADVSVC------------- 284
Query: 178 EACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQN 237
NA+++ + G + A FW + D VSWNT+I+GY N
Sbjct: 285 ------------------NALLSFYLKVGRTKEAESLFWAM-DARDLVSWNTIIAGYALN 325
Query: 238 GDAEEGLKLFVRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG-LISNPF 295
G+ + L +F + + + T S L AC L N++ K++H+++L++ L +
Sbjct: 326 GEWLKSLHVFGNLVSLEMLLLDSVTMVSILPACAQLDNLQAGKQVHAYILRHPFLFEDTS 385
Query: 296 VSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKN 355
+ +V Y KC G +EEA F ++ K+
Sbjct: 386 AGNALVSFYAKC-------------------------------GYIEEAYHTFSMISRKD 414
Query: 356 VVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIH 415
++ W ++ + + ++ LL + K + D++ ++ ++ CA + KEIH
Sbjct: 415 LISWNSILDAFGEKRHHSRFLSLL-HVMLKLDIRPDSVTILTIIHFCASLLRVKKVKEIH 473
Query: 416 AYILRMGVQM---DKKLISTLVDMYSKCGNMTYAEIIFQNFIER---------------- 456
Y +R G + + + ++D YSKCGN+ YA +FQN E+
Sbjct: 474 GYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYANKMFQNLSEKRNLVTCNSLISGYVGL 533
Query: 457 ----------------DLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVA-- 498
DL +N+M+ YA + E+A+ LF ++ +G+KPD VT ++
Sbjct: 534 GSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALELFLKLQTQGMKPDVVTIMSLI 593
Query: 499 --------------------------------ILSAFRHCGSVEMGEKYFNSMTADYKIS 526
+L A+ CG + K F S +
Sbjct: 594 PVCTQMASVHLLRQCHGYIIRSSFEDLHLKGTLLDAYAKCGIIGYAYKIFQS-----SVD 648
Query: 527 PETDHYACMIDLYGRANQLEKAIE---FMKSIPTEEDAVILGSFLNVC 571
+ + MI Y EKA+E M ++ + D VI S L+ C
Sbjct: 649 KDLVMFTAMIGGYAMHGMSEKALETFSHMLNMGIKPDHVIFTSILSAC 696
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 126/251 (50%), Gaps = 12/251 (4%)
Query: 4 LNLKEALICHVQAIKAG-LTLTTITT--NQLIHIYSKHNLLRESRKLFDEMPE-RNVFSW 59
L +K+ H +I++G L T T N ++ YSK + + K+F + E RN+ +
Sbjct: 464 LRVKKVKEIHGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYANKMFQNLSEKRNLVTC 523
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N++IS + A +F DL T+N M+ Y + E AL+LF+++Q+ +
Sbjct: 524 NSLISGYVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPE-QALELFLKLQT--Q 580
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
++ D T+ S + +C ++ +V RQ H +++++S + +L+D Y+KC A
Sbjct: 581 GMKPDVVTIMSLIPVCTQMASVHLLRQCHGYIIRSSFEDLHLK-GTLLDAYAKCGIIGYA 639
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN---DAVSWNTLISGYVQ 236
++F+ ++ +L+ AM+ G E AL+TF + D V + +++S
Sbjct: 640 YKIFQSSVDK-DLVMFTAMIGGYAMHGMSEKALETFSHMLNMGIKPDHVIFTSILSACSH 698
Query: 237 NGDAEEGLKLF 247
G EGLK+F
Sbjct: 699 AGRIAEGLKIF 709
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 103/227 (45%), Gaps = 27/227 (11%)
Query: 391 DALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIF 450
D +L +L +C+ A + GK +H+Y+++ G L++MY+KCG + +F
Sbjct: 36 DHEVLAAILKSCSALLASNLGKCLHSYVVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLF 95
Query: 451 QNFIERDLVLYNVMIACYAHHGHEEKAIL-LFEEMLEKG-IKPDAVTFVAILSAFRHCGS 508
F D V++N++++ Y+ G + ++ +F M G + P +VT +L G+
Sbjct: 96 DQFGRCDPVIWNIVLSGYSRSGKNDADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGN 155
Query: 509 VEMGEKYFNSMTADYKISPETDHYA--CMIDLYGRANQLEKAIEFMKSIPTEEDAVILGS 566
+ G+ + K E D +A ++ +Y + + + + S
Sbjct: 156 LNGGKSVHGYVI---KSGFEMDTFAGNALVSMYAKCG-----------LVACDAYAVFDS 201
Query: 567 FLNVCRLNRNAELAGEAEEKLLR---------LEGNNKARYVQLANV 604
++ ++ NA +AG AE LL+ ++G+ K Y +AN+
Sbjct: 202 IIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMKGSVKPNYATVANI 248
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 203/672 (30%), Positives = 336/672 (50%), Gaps = 77/672 (11%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L++A H +G+ LI +YSK + + ++F +M ERNV SW II A
Sbjct: 195 LEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQA 254
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
+ L +A L Y ML I+ +
Sbjct: 255 NAQHRKLNEAFEL-----------YEKMLQAGISP-----------------------NA 280
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
T S LN C + GR++H+ + + + ++LI MY KC C ++A
Sbjct: 281 VTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDA------ 334
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG--DAE-- 241
RE TF R + D +SW+ +I+GY Q+G D E
Sbjct: 335 ------------------RE--------TFDRMSK-RDVISWSAMIAGYAQSGYQDKESL 367
Query: 242 -EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
E +L RM GV N+ TF S L AC ++ ++IH+ + K G S+ + + I
Sbjct: 368 DEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAI 427
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
++Y KC ++ AE + +N + +S++ Y G++ A + F ++ +NVV W
Sbjct: 428 FNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWN 487
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
+ +GY ++ + +F+LLS EG D + ++ +L AC +AL GK +HA ++
Sbjct: 488 LMIAGYAQSGDIAKVFELLSSMKV-EGFQPDRVTIISILEACGALSALERGKLVHAEAVK 546
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
+G++ D + ++L+ MYSKCG +T A +F RD V +N M+A Y HG +A+ L
Sbjct: 547 LGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDL 606
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
F+ ML++ + P+ +TF A++SA G V+ G + F M D+++ P HY CM+DL G
Sbjct: 607 FKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLG 666
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQ 600
RA +L++A EF++ +P E D + + L C+ + N +LA A +LRLE +N + YV
Sbjct: 667 RAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVT 726
Query: 601 LANVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
L+N+YA G W + ++RK M +G+K +R G S + ++ IH F D +HP+ ++I+
Sbjct: 727 LSNIYAQAGRWDDSTKVRKVMDDKGLKKDR--GESSIEIDGRIHTFVAEDCAHPEIDSIH 784
Query: 659 SVLAIFTGELYE 670
+ L + T E+ E
Sbjct: 785 AELEMLTKEMKE 796
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 145/313 (46%), Gaps = 33/313 (10%)
Query: 238 GDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVS 297
G +E ++L + + G+ N +T+ + C LR + K +H + + GL + ++
Sbjct: 57 GRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLG 116
Query: 298 SGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVV 357
+ +++ Y K ++ E + +R+ + SSMI Y+ + +A F+ + + N
Sbjct: 117 NSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDAN-- 174
Query: 358 VWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
+ + + + +L AC + L +EIH
Sbjct: 175 ------------------------------IEPNRITFLSILKACNNYSMLEKAREIHTV 204
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
+ G++ D + + L+ MYSKCG ++ A IFQ ER++V + +I A H +A
Sbjct: 205 VKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEA 264
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID 537
L+E+ML+ GI P+AVTFV++L++ ++ G + +S ++ + + +I
Sbjct: 265 FELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRR-IHSHISERGLETDVVVANALIT 323
Query: 538 LYGRANQLEKAIE 550
+Y + N ++ A E
Sbjct: 324 MYCKCNCIQDARE 336
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 107/225 (47%), Gaps = 7/225 (3%)
Query: 382 FVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
+ + G++ ++ ++ CA GK +H + +G+ +D L ++L++ YSK G
Sbjct: 68 IIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFG 127
Query: 442 NMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
++ E +F+ RD+V ++ MIA YA + H KA FE M + I+P+ +TF++IL
Sbjct: 128 DVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILK 187
Query: 502 AFRHCGSVEMGEKYFNSMTADYKISPETD--HYACMIDLYGRANQLEKAIEFMKSIPTEE 559
A C + M EK T ETD +I +Y + ++ A E + + E
Sbjct: 188 A---CNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKM-KER 243
Query: 560 DAVILGSFLNVCRLNRNAELAGEAEEKLLRLE-GNNKARYVQLAN 603
+ V + + +R A E EK+L+ N +V L N
Sbjct: 244 NVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLN 288
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 214/663 (32%), Positives = 327/663 (49%), Gaps = 80/663 (12%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHI--YSKHNLLRESRKLFDEMPERNVFSWNTI 62
NLK+ H Q IK GL T ++LI S L + LF+ + + N F WNT+
Sbjct: 47 NLKQ---IHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTM 103
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSML-CGYINAEGYEADALKLFIEMQSADEHI 121
I + SL SSP + Y ML CG +
Sbjct: 104 I----------RGNSL-SSSPVGAIDFYVRMLLCG------------------------V 128
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+ +T L C K+ G+Q+H ++K ++ F +SLI+MY++ A
Sbjct: 129 EPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAEL 188
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
VF + + +S A++ G ++ A + F P + DAVSWN +I+GY Q+G E
Sbjct: 189 VFSKSSLR-DAVSFTALITGYTLRGCLDDARRLFEEIP-VRDAVSWNAMIAGYAQSGRFE 246
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E L F M V NE T + LSAC +++ + SW+ +GL SN + + ++
Sbjct: 247 EALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALI 306
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D+Y KC G++++AR F+ + EK+++ W
Sbjct: 307 DMYSKC-------------------------------GDLDKARDLFEGICEKDIISWNV 335
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+ GY + + L + + + V + + V +L ACA AL GK IHAYI +
Sbjct: 336 MIGGYSHMNSYKEALALFRK-MQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKK 394
Query: 422 GVQM-DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
+ + + L ++L+DMY+KCGN+ A+ +F + L +N MI+ A HGH A+ L
Sbjct: 395 FLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALEL 454
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
F +M ++G +PD +TFV +LSA H G VE+G + F+SM DY ISP+ HY CMIDL G
Sbjct: 455 FRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLG 514
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQ 600
RA ++A MK++ + D I GS L CR++ N EL A + L LE N YV
Sbjct: 515 RAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVL 574
Query: 601 LANVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
L+N+YA G W ++ RIR ++ +GMK + GCS + V+ +H F VGD H ++ IY
Sbjct: 575 LSNIYATAGRWDDVARIRTKLNDKGMK--KVPGCSSIEVDSVVHEFLVGDKVHEQSQDIY 632
Query: 659 SVL 661
+L
Sbjct: 633 KML 635
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 146/334 (43%), Gaps = 66/334 (19%)
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLL 319
H + LS C +N+K +IHS ++K GL + F S +++ +C
Sbjct: 33 HPSLTLLSTCKSFQNLK---QIHSQIIKTGLHNTQFALSKLIE-FC-------------- 74
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLL 379
+IS GN+ A F+S+ + N +W + G + + D
Sbjct: 75 -------AISPF-------GNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFY 120
Query: 380 SEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
+ GV ++ LL +CA A GK+IH ++L++G++ D + ++L++MY++
Sbjct: 121 VRMLLC-GVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQ 179
Query: 440 CGNMTYAEII-------------------------------FQNFIERDLVLYNVMIACY 468
G + YAE++ F+ RD V +N MIA Y
Sbjct: 180 NGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGY 239
Query: 469 AHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE 528
A G E+A+ F+EM + P+ T V +LSA GS+E+G + S D+ +
Sbjct: 240 AQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELG-NWVRSWIEDHGLGSN 298
Query: 529 TDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAV 562
+ID+Y + L+KA + + I E+D +
Sbjct: 299 LRLVNALIDMYSKCGDLDKARDLFEGI-CEKDII 331
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 192/596 (32%), Positives = 310/596 (52%), Gaps = 43/596 (7%)
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
L A S+F++ +L+ +N+ML G+ ++ AL++++ M S H+ + ++
Sbjct: 14 LPYAISVFETIQEPNLLIWNTMLRGHASSSD-PVSALEMYVRMVSLG-HLP-NSYSFPFL 70
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L C K GRQ+HA ++K + +SLI MY++ E+A +VF+ + +
Sbjct: 71 LKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHR-D 129
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
++S A++ G+ A K F E D VSWN +I+GYV+NG EE L+LF M
Sbjct: 130 VVSCTALITGYASRGDFRSARKVFDEITE-RDVVSWNAMITGYVENGRYEEALELFKEMM 188
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWV----LKNGLISNPFVSSGIVDVYCKC 307
VR +E T S +SAC +++ +++HSWV +G S+ + + ++D+Y KC
Sbjct: 189 RTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKC 248
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
G++E A F+ L+ K+VV W L GY
Sbjct: 249 -------------------------------GDVETAFGLFEGLSCKDVVSWNTLIGGYT 277
Query: 368 KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR--MGVQM 425
+ L E + + G + + L+ +L ACA A+ G+ IH YI + GV
Sbjct: 278 HTNLYKEALLLFQEML-RSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTN 336
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
+ L ++L+DMY+KCG++ A +F + + R L +N MI +A HG A LF M
Sbjct: 337 ETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMR 396
Query: 486 EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQL 545
++PD +TFV +LSA H G +++G + F SMT DY ++P+ +HY CMIDL G +
Sbjct: 397 GNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLF 456
Query: 546 EKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVY 605
++A E + ++P E D VI S L C+ + N ELA +KL+++E N YV L+N+Y
Sbjct: 457 KEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIEPENSGSYVLLSNIY 516
Query: 606 AAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
A G W ++ R+R + G + GCS + V+ +H F +GD HP+ IY +L
Sbjct: 517 ATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVVHEFIIGDKLHPRRREIYHML 572
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 156/583 (26%), Positives = 253/583 (43%), Gaps = 127/583 (21%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
+S +E H Q +K G L LI +Y+++ L ++RK+FD R+V S
Sbjct: 76 KSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTA 135
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I+ D + AR +FD +D+V++N+M+ GY+ YE +AL+LF EM + +
Sbjct: 136 LITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYE-EALELFKEMMRTN--V 192
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFA-----VSSLIDMYSKCRCY 176
R DE T+ S ++ C + ++ GRQ+H++ V +D GF+ V++LID+YSKC
Sbjct: 193 RPDEGTLVSVVSACAQSGSIELGRQVHSW-VDDDDDDHGFSSSLKIVNALIDLYSKCGDV 251
Query: 177 EEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQ 236
E A +FEG + C+ D VSWNTLI GY
Sbjct: 252 ETAFGLFEGLS---------------CK------------------DVVSWNTLIGGYTH 278
Query: 237 NGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLK--NGLISNP 294
+E L LF M +G N+ T S L AC L + + IH ++ K G+ +
Sbjct: 279 TNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNET 338
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
+ + ++D+Y KC G++E A + F+S+ +
Sbjct: 339 SLRTSLIDMYAKC-------------------------------GDIEAAHQVFNSMLYR 367
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
++ W A+ G+ A FDL S V D + V LL AC+
Sbjct: 368 SLSSWNAMIFGFAMHGRANAAFDLFSRMRGNR-VEPDDITFVGLLSACS----------- 415
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
H+ +L +G Q+ K + N+T L Y MI H G
Sbjct: 416 HSGLLDLGRQIFKSMTQDY--------NLT-----------PKLEHYGCMIDLLGHSGLF 456
Query: 475 EKAILLFEEMLEK-GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE-TDHY 532
++A EEM+ ++PD V + ++L A + G++E+ E + + KI PE + Y
Sbjct: 457 KEA----EEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLI---KIEPENSGSY 509
Query: 533 ACMIDLYGRANQLEKAIEF--------MKSIP----TEEDAVI 563
+ ++Y A + E MK +P E D+V+
Sbjct: 510 VLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVV 552
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 194/661 (29%), Positives = 327/661 (49%), Gaps = 67/661 (10%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H QAIK GL + N+++ H + D
Sbjct: 38 HCQAIKKGLNANPVLQNRVMTFCCTH-----------------------------EYGDF 68
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+ AR LFD P +L +N+M+ GY + + + L++EM ++ D +T
Sbjct: 69 QYARRLFDEIPEPNLFIWNTMIRGYSRLD-FPQLGVSLYLEMLR--RGVKPDRYTFPFLF 125
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ + + +GRQLH ++K + F ++L+ MY C + A VF+ C +
Sbjct: 126 KGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKA--- 182
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
D ++WN +IS Y + G EE +LF+ M +
Sbjct: 183 ------------------------------DVITWNMIISAYNKVGKFEESRRLFLVMED 212
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
V T LSAC L++++ K++HS+V + SN + + ++D+Y C M+
Sbjct: 213 KQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDS 272
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
A + R+ S ++++ G++ G ++ AR +FD + EK+ V WTA+ GY+++
Sbjct: 273 ALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRF 332
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
+ +L + V D +V +L ACA AL G+ I YI R ++ D + +
Sbjct: 333 KEALELFRN-MQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNA 391
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
L+DMY KCG++ AE IF+ +RD + MI A +GH EKA+ +F ML+ I PD
Sbjct: 392 LIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPD 451
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
+T++ +LSA H G V+ G KYF MT+ + I P HY C++DL RA +L++A E +
Sbjct: 452 EITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVI 511
Query: 553 KSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWA 612
+++P + ++++ G+ L CR+ R +++A +++L LE +N A YV L N+YAA W
Sbjct: 512 ENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWN 571
Query: 613 EMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
++ +R+ M + GCS + + +H F GD SHP+T I + L T +L ++A
Sbjct: 572 DLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDL-KLA 630
Query: 673 G 673
G
Sbjct: 631 G 631
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/511 (23%), Positives = 236/511 (46%), Gaps = 79/511 (15%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R + L+ H +K GL L+ +Y L +R +FD P+ +V +WN
Sbjct: 130 RDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNM 189
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
IISA K +++R LF L +E D+ +
Sbjct: 190 IISAYNKVGKFEESRRLF------------------------------LVME----DKQV 215
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
T+ L+ C KL ++ G+++H+++ +++ +++IDMY+ C + A
Sbjct: 216 LPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALG 275
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F ++IS +V+ GE+++A F + PE D VSW +I GY+++ +
Sbjct: 276 IFRSMNNR-DIISWTTIVSGFTNLGEIDVARNYFDKMPE-KDYVSWTAMIDGYIRSNRFK 333
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E L+LF M V+ +E T S L+AC L ++ + I +++ +N + ++ FV + ++
Sbjct: 334 EALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALI 393
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D+Y KC +++ AES+ R+ F+ ++MIVG ++ G+ E+A
Sbjct: 394 DMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKA---------------LD 438
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+FS +KA ++ D + + +L AC + G++ Y LRM
Sbjct: 439 MFSNMLKA-----------------SILPDEITYIGVLSACTHTGLVDKGRK---YFLRM 478
Query: 422 ----GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEK 476
G++ + LVD+ ++ G + A + +N I+ + +++ ++A + +
Sbjct: 479 TSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDM 538
Query: 477 AILLFEEMLEKGIKPD-AVTFVAILSAFRHC 506
A ++ +++LE ++PD +V + + + C
Sbjct: 539 AEMVVKQILE--LEPDNGAVYVLLCNIYAAC 567
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 128/296 (43%), Gaps = 34/296 (11%)
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLL 319
H S L C + ++ ++H +K GL +NP + + ++ C E
Sbjct: 19 HPLISLLETCESMDQLQ---QVHCQAIKKGLNANPVLQNRVMTFCCTHE----------- 64
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLL 379
G+ + ARR FD + E N+ +W + GY + + L
Sbjct: 65 ------------------YGDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLY 106
Query: 380 SEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
E + + GV D L AL G+++H ++L+ G+Q + + + LV MY
Sbjct: 107 LEML-RRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLL 165
Query: 440 CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
CG + A +F + D++ +N++I+ Y G E++ LF M +K + P VT V +
Sbjct: 166 CGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLV 225
Query: 500 LSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSI 555
LSA + G+K +S + K+ MID+Y +++ A+ +S+
Sbjct: 226 LSACSKLKDLRTGKK-VHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSM 280
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 194/661 (29%), Positives = 327/661 (49%), Gaps = 67/661 (10%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H QAIK GL + N+++ H + D
Sbjct: 59 HCQAIKKGLNANPVLQNRVMTFCCTH-----------------------------EYGDF 89
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+ AR LFD P +L +N+M+ GY + + + L++EM ++ D +T
Sbjct: 90 QYARRLFDEIPEPNLFIWNTMIRGYSRLD-FPQLGVSLYLEMLR--RGVKPDRYTFPFLF 146
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ + + +GRQLH ++K + F ++L+ MY C + A VF+ C +
Sbjct: 147 KGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKA--- 203
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
D ++WN +IS Y + G EE +LF+ M +
Sbjct: 204 ------------------------------DVITWNMIISAYNKVGKFEESRRLFLVMED 233
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
V T LSAC L++++ K++HS+V + SN + + ++D+Y C M+
Sbjct: 234 KQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDS 293
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
A + R+ S ++++ G++ G ++ AR +FD + EK+ V WTA+ GY+++
Sbjct: 294 ALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRF 353
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
+ +L + V D +V +L ACA AL G+ I YI R ++ D + +
Sbjct: 354 KEALELFRN-MQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNA 412
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
L+DMY KCG++ AE IF+ +RD + MI A +GH EKA+ +F ML+ I PD
Sbjct: 413 LIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPD 472
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
+T++ +LSA H G V+ G KYF MT+ + I P HY C++DL RA +L++A E +
Sbjct: 473 EITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVI 532
Query: 553 KSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWA 612
+++P + ++++ G+ L CR+ R +++A +++L LE +N A YV L N+YAA W
Sbjct: 533 ENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWN 592
Query: 613 EMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
++ +R+ M + GCS + + +H F GD SHP+T I + L T +L ++A
Sbjct: 593 DLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDL-KLA 651
Query: 673 G 673
G
Sbjct: 652 G 652
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 119/511 (23%), Positives = 236/511 (46%), Gaps = 79/511 (15%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R + L+ H +K GL L+ +Y L +R +FD P+ +V +WN
Sbjct: 151 RDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNM 210
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
IISA K +++R LF L +E D+ +
Sbjct: 211 IISAYNKVGKFEESRRLF------------------------------LVME----DKQV 236
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
T+ L+ C KL ++ G+++H+++ +++ +++IDMY+ C + A
Sbjct: 237 LPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALG 296
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F ++IS +V+ GE+++A F + PE D VSW +I GY+++ +
Sbjct: 297 IFRSMNNR-DIISWTTIVSGFTNLGEIDVARNYFDKMPE-KDYVSWTAMIDGYIRSNRFK 354
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E L+LF M V+ +E T S L+AC L ++ + I +++ +N + ++ FV + ++
Sbjct: 355 EALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALI 414
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D+Y KC +++ AES+ R+ F+ ++MIVG ++ G+ E+A
Sbjct: 415 DMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKA---------------LD 459
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+FS +KA ++ D + + +L AC + G++ Y LRM
Sbjct: 460 MFSNMLKA-----------------SILPDEITYIGVLSACTHTGLVDKGRK---YFLRM 499
Query: 422 ----GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEK 476
G++ + LVD+ ++ G + A + +N I+ + +++ ++A + +
Sbjct: 500 TSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDM 559
Query: 477 AILLFEEMLEKGIKPD-AVTFVAILSAFRHC 506
A ++ +++LE ++PD +V + + + C
Sbjct: 560 AEMVVKQILE--LEPDNGAVYVLLCNIYAAC 588
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 128/296 (43%), Gaps = 34/296 (11%)
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLL 319
H S L C + ++ ++H +K GL +NP + + ++ C E
Sbjct: 40 HPLISLLETCESMDQLQ---QVHCQAIKKGLNANPVLQNRVMTFCCTHE----------- 85
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLL 379
G+ + ARR FD + E N+ +W + GY + + L
Sbjct: 86 ------------------YGDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLY 127
Query: 380 SEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
E + + GV D L AL G+++H ++L+ G+Q + + + LV MY
Sbjct: 128 LEML-RRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLL 186
Query: 440 CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
CG + A +F + D++ +N++I+ Y G E++ LF M +K + P VT V +
Sbjct: 187 CGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLV 246
Query: 500 LSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSI 555
LSA + G+K +S + K+ MID+Y +++ A+ +S+
Sbjct: 247 LSACSKLKDLRTGKK-VHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSM 301
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 218/691 (31%), Positives = 342/691 (49%), Gaps = 113/691 (16%)
Query: 56 VFSWNTIISACIKSHDLKQARSLFDSSPHK-DLVTYNSMLCGYINAEGYEADALKLFIEM 114
VF N+I+ K +DL AR LFD P K D+V++NSM+ Y ++ G +AL+LF EM
Sbjct: 215 VFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAY-SSNGQSIEALRLFGEM 273
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDM----- 169
Q A + + +T + L C + G +HA ++K+S + F ++LI M
Sbjct: 274 QKAS--LAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFG 331
Query: 170 --------------------------YSKCRCYEEACRVF---EGCTEEVNLISKNAMVA 200
+ + Y EA + + ++ +L++ +++A
Sbjct: 332 KMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIA 391
Query: 201 ACCREGE-----------MEMALKT------------------------FWRQPELNDAV 225
A R G M+ L + F + P+ D V
Sbjct: 392 ASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPD-KDVV 450
Query: 226 SWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWV 285
SW T+I+G+ QNG L+LF + G+ + +S L AC GL+ + KEIHS++
Sbjct: 451 SWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYI 510
Query: 286 LKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEAR 345
++ GL S+ + +GIVDVY +C N++YA M
Sbjct: 511 IRKGL-SDLVLQNGIVDVYGECGNVDYAARM----------------------------- 540
Query: 346 RHFDSLTEKNVVVWTALFSGYVK---AQNCEALFDLLSEFVTKEGVVTDALILVILLGAC 402
F+ + K+VV WT++ S YV A LF L+ E GV D++ LV +L A
Sbjct: 541 --FELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKE----TGVEPDSISLVSILSAA 594
Query: 403 ALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYN 462
A +AL GKEIH +++R G ++ L STLVDMY++CG + + +F +DLVL+
Sbjct: 595 ASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWT 654
Query: 463 VMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTAD 522
MI Y HG AI LF M ++ I PD + FVA+L A H G + G ++ SM +
Sbjct: 655 SMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYE 714
Query: 523 YKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGE 582
Y++ P +HYAC++DL GRAN LE+A +F+K + E A + + L C+++ N EL
Sbjct: 715 YQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEI 774
Query: 583 AEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIH 642
A +KLL ++ N YV ++NVY+AE W ++ +R +M+ + GCSW+ V +++H
Sbjct: 775 AAQKLLEMDPENPGNYVLVSNVYSAERRWKDVEXVRMRMKASGLKKNPGCSWIEVGNKVH 834
Query: 643 IFTVGDVSHPKTNAIYSVLAIFTGELYEIAG 673
F D SHP++ IYS L+ T +L + G
Sbjct: 835 TFMARDKSHPQSYEIYSKLSQITEKLAKEGG 865
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/498 (23%), Positives = 212/498 (42%), Gaps = 99/498 (19%)
Query: 6 LKEALICHVQAIKAGLTLTTI-TTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
L E H I + ++ + +L+ +Y K L ++ KLFD MP + +F+WN +I
Sbjct: 94 LSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIG 153
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
A + + G +L+L+ EM+ + I +D
Sbjct: 154 AYVTN--------------------------------GEPLGSLELYREMRVSG--IPLD 179
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
T L C L + +G ++H +K + F +S++ MY+KC A ++F+
Sbjct: 180 ACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFD 239
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
E+ +++S N+M IS Y NG + E L
Sbjct: 240 RMPEKEDVVSWNSM--------------------------------ISAYSSNGQSIEAL 267
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
+LF M + + N +TF +AL AC +K IH+ VLK+ N FV++ ++ +Y
Sbjct: 268 RLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMY 327
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
+ G M EA F ++ + + + W ++ S
Sbjct: 328 ARF-------------------------------GKMGEAANIFYNMDDWDTISWNSMLS 356
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
G+V+ E + G D + ++ ++ A A G +IHAY ++ G+
Sbjct: 357 GFVQNGLYHEALQFYHE-MRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLD 415
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
D ++ ++LVDMY+K +M Y + IF ++D+V + +IA +A +G +A+ LF E+
Sbjct: 416 SDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREV 475
Query: 485 LEKGIKPDAVTFVAILSA 502
+GI D + +IL A
Sbjct: 476 QLEGIDLDVMMISSILLA 493
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 192/434 (44%), Gaps = 83/434 (19%)
Query: 117 ADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDA--SGFAVSSLIDMYSKCR 174
+ +DE +S L LC + G+Q+HA M+ TSN S F + L+ MY KC
Sbjct: 71 SPSQFSLDE-AYSSVLELCGSKKALSEGQQVHAHMI-TSNALFNSVFLSTRLVFMYGKCG 128
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
C +A ++F+G M KT + +WN +I Y
Sbjct: 129 CLVDAEKLFDG------------------------MPHKTIF---------TWNAMIGAY 155
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
V NG+ L+L+ M +G+ + TF L AC L++ + E+H +K G +S
Sbjct: 156 VTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIV 215
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
FV++ IV +Y KC ++N AR+ FD + EK
Sbjct: 216 FVANSIVGMYTKCNDLN-------------------------------GARQLFDRMPEK 244
Query: 355 -NVVVWTALFSGYVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
+VV W ++ S Y Q+ EAL L E + K + + V L AC + + G
Sbjct: 245 EDVVSWNSMISAYSSNGQSIEAL-RLFGE-MQKASLAPNTYTFVAALQACEDSSFIKQGM 302
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
IHA +L+ ++ + + L+ MY++ G M A IF N + D + +N M++ + +G
Sbjct: 303 FIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNG 362
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYF-----NSMTADYKISP 527
+A+ + EM + G KPD V ++I++A G+ G + N + +D ++
Sbjct: 363 LYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGN 422
Query: 528 ETDHYACMIDLYGR 541
++D+Y +
Sbjct: 423 S------LVDMYAK 430
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 175/412 (42%), Gaps = 102/412 (24%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
RS N + H A+K GL N L+ +Y+K ++ +FD+MP+++V SW T
Sbjct: 395 RSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTT 454
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
II+ ++ G + AL+LF E+Q E I
Sbjct: 455 IIAGHAQN--------------------------------GSHSRALELFREVQL--EGI 480
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS-LIDMYSKCRCYEEAC 180
+D ++S L C L + +++H+++++ S + + ++D+Y +C + A
Sbjct: 481 DLDVMMISSILLACSGLKLISSVKEIHSYIIRKG--LSDLVLQNGIVDVYGECGNVDYAA 538
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
R+FE LI E D VSW ++IS YV NG A
Sbjct: 539 RMFE-------LI--------------------------EFKDVVSWTSMISCYVHNGLA 565
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
E L+LF M E GV + + S LSA L +K KEIH ++++ G + ++S +
Sbjct: 566 NEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTL 625
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
VD+Y +C G +E++R F+ + K++V+WT
Sbjct: 626 VDMYARC-------------------------------GTLEKSRNVFNFIRNKDLVLWT 654
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
++ + Y A DL + E + D + V +L AC+ ++ G+
Sbjct: 655 SMINAYGMHGCGRAAIDLFRR-MEDESIAPDHIAFVAVLYACSHSGLMNEGR 705
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 30/211 (14%)
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
++L DL + + + +A V+ L C + AL G+++HA+++ + +ST
Sbjct: 61 QSLTDLFANQSPSQFSLDEAYSSVLEL--CGSKKALSEGQQVHAHMITSNALFNSVFLST 118
Query: 433 -LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
LV MY KCG + AE +F + + +N MI Y +G ++ L+ EM GI
Sbjct: 119 RLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPL 178
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA-------------CMIDL 538
DA TF IL A CG + D + E A ++ +
Sbjct: 179 DACTFPCILKA---CG-----------LLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGM 224
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLN 569
Y + N L A + +P +ED V S ++
Sbjct: 225 YTKCNDLNGARQLFDRMPEKEDVVSWNSMIS 255
>gi|359491917|ref|XP_003634341.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 767
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 195/656 (29%), Positives = 330/656 (50%), Gaps = 72/656 (10%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
LK AL H A K + T ++ +Y K + ++K+F P ++F WN++I
Sbjct: 143 LKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYG 202
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
K +K+A LF P +D V++N+M+ ++ G+ A+ L F+EM ++ R +
Sbjct: 203 YSKYGSVKKALELFAKMPERDTVSWNTMI-SILSQHGFGAETLNTFLEMW--NQGFRPNS 259
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
T S L+ C + ++ +G LHA +V+ +A LIDMY+KC E A +VF+G
Sbjct: 260 MTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDG 319
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
TE ++AVSW +LI G Q G EE L
Sbjct: 320 LTE---------------------------------HNAVSWTSLIGGVAQAGFQEEALV 346
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
LF +M E V ++ T A+ L C +++ +++H+ + GL S+ V++ +V +Y
Sbjct: 347 LFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYA 406
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
KC ++ A L +R+ S ++MI +S G++E+AR +FD + E+NV+ W ++ +
Sbjct: 407 KCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLAT 466
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
Y++ E + + + +EGV TD + + ACA A L G +I A ++G
Sbjct: 467 YMQRGYWEEGLKVYIQML-REGVKTDWITFSTSISACADLAVLILGNQILAQAEKLGFSS 525
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
+ + +++V MYS+CG + A+ +F + + ++LV +N M+A YA +G K I +FE+ML
Sbjct: 526 NVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKML 585
Query: 486 EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQL 545
G PD +++V++LS DL GRA QL
Sbjct: 586 NIGNVPDQISYVSVLS-----------------------------------DLLGRAGQL 610
Query: 546 EKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVY 605
E+A + +P + +A I G+ L CR++ N +LA A + LL L+ Y LAN+Y
Sbjct: 611 EQAKNLINQMPFKPNAAIWGALLAACRIHGNTKLAELAVKNLLELDAEGPGSYCLLANIY 670
Query: 606 AAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+ G + +RK MR + GCSW+ V++ +H+FTV D +HP+ ++ +L
Sbjct: 671 SESGKIQGVTNVRKLMRDKGVRKNPGCSWIEVDNRVHVFTVDDTNHPQIKDVHRML 726
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 131/495 (26%), Positives = 230/495 (46%), Gaps = 23/495 (4%)
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
C L ++ R+LHA ++ +S F + L++MYS C +A RVF G N+ S
Sbjct: 4 CASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFP-NVYS 62
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
N M++ G+M A K F + PE D+VSWN+++SGY NG+ E +K+FV M
Sbjct: 63 WNTMISGFADSGQMREAEKLFEKMPE-RDSVSWNSMMSGYFHNGELEATIKVFVSM---- 117
Query: 255 VR-----WNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
VR + +F+ + A L +K A ++H + K + V + ++D+Y KC
Sbjct: 118 VRDCCCVPDPFSFSCVMKASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGA 177
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
M++A+ + + F +SMI GYS G++++A F + E++ V W + S + +
Sbjct: 178 MDFAQKVFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMIS--ILS 235
Query: 370 QN---CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMD 426
Q+ E L L + +G +++ +L AC L G +HA I+RM +D
Sbjct: 236 QHGFGAETLNTFLEMW--NQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLD 293
Query: 427 KKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
L+DMY+KCG + A +F E + V + +I A G +E+A++LF +M E
Sbjct: 294 VYAGCGLIDMYAKCGRLESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMRE 353
Query: 487 KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLE 546
+ D T +L + +GE+ ++ T + ++ +Y + +
Sbjct: 354 VPVASDQFTLATVLGVCLSQKDISIGEQ-LHAHTITRGLDSSVPVANALVTMYAKCGDVW 412
Query: 547 KAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYA 606
KA + +P D + + + + E +A E ++ N + + Y
Sbjct: 413 KANHAFELMPI-RDIISWTAMITAFSQAGDVE---KAREYFDKMPERNVISWNSMLATYM 468
Query: 607 AEGNWAEMGRIRKQM 621
G W E ++ QM
Sbjct: 469 QRGYWEEGLKVYIQM 483
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 167/371 (45%), Gaps = 46/371 (12%)
Query: 266 LSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNS 325
+ C LR++ A+++H+ ++ GL S+ F+ + ++++Y C ++ A + N
Sbjct: 1 MKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNV 60
Query: 326 FSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTK 385
+S ++MI G++ G M EA + F+ + E++ V W ++ SGY EA + V
Sbjct: 61 YSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKVFVSMVRD 120
Query: 386 EGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTY 445
V D ++ A L ++H + + +D + ++++DMY KCG M +
Sbjct: 121 CCCVPDPFSFSCVMKASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDF 180
Query: 446 AEII-------------------------------FQNFIERDLVLYNVMIACYAHHGHE 474
A+ + F ERD V +N MI+ + HG
Sbjct: 181 AQKVFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFG 240
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA- 533
+ + F EM +G +P+++T+ ++LSA +E G + ++ P D YA
Sbjct: 241 AETLNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIV---RMEPCLDVYAG 297
Query: 534 C-MIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
C +ID+Y + +LE A + + TE +AV S + AG EE L+
Sbjct: 298 CGLIDMYAKCGRLESARQVFDGL-TEHNAVSWTSLIG------GVAQAGFQEEALVLF-- 348
Query: 593 NNKARYVQLAN 603
N+ R V +A+
Sbjct: 349 -NQMREVPVAS 358
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 216/691 (31%), Positives = 341/691 (49%), Gaps = 113/691 (16%)
Query: 56 VFSWNTIISACIKSHDLKQARSLFDSSPHK-DLVTYNSMLCGYINAEGYEADALKLFIEM 114
VF N+I+ K +DL AR LFD P K D+V++NSM+ Y ++ G +AL+LF EM
Sbjct: 251 VFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAY-SSNGQSIEALRLFGEM 309
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTS------------------- 155
Q A + + +T + L C + G +HA ++K+S
Sbjct: 310 QKAS--LAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFG 367
Query: 156 ------------NDASGFAVSSLIDMYSKCRCYEEACRVF---EGCTEEVNLISKNAMVA 200
+D + +S++ + + Y EA + + ++ +L++ +++A
Sbjct: 368 KMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIA 427
Query: 201 ACCREGE-----------MEMALKT------------------------FWRQPELNDAV 225
A R G M+ L + F + P+ D V
Sbjct: 428 ASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPD-KDVV 486
Query: 226 SWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWV 285
SW T+I+G+ QNG L+LF + G+ + +S L AC GL+ + KEIHS++
Sbjct: 487 SWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYI 546
Query: 286 LKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEAR 345
++ GL S+ + +GIVDVY +C N++YA M
Sbjct: 547 IRKGL-SDLVLQNGIVDVYGECGNVDYAARM----------------------------- 576
Query: 346 RHFDSLTEKNVVVWTALFSGYVK---AQNCEALFDLLSEFVTKEGVVTDALILVILLGAC 402
F+ + K+VV WT++ S YV A LF L+ E GV D++ LV +L A
Sbjct: 577 --FELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKE----TGVEPDSISLVSILSAA 630
Query: 403 ALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYN 462
A +AL GKEIH +++R G ++ L STLVDMY++CG + + +F +DLVL+
Sbjct: 631 ASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWT 690
Query: 463 VMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTAD 522
MI Y HG AI LF M ++ I PD + FVA+L A H G + G ++ SM +
Sbjct: 691 SMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYE 750
Query: 523 YKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGE 582
Y++ P +HY C++DL GRAN LE+A +F+K + E A + + L C+++ N EL
Sbjct: 751 YQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEI 810
Query: 583 AEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIH 642
A +KLL ++ N YV ++NVYAAE W ++ +R +M+ + GCSW+ V +++H
Sbjct: 811 AAQKLLEMDPENPGNYVLVSNVYAAERRWKDVEEVRMRMKASGLKKNPGCSWIEVGNKVH 870
Query: 643 IFTVGDVSHPKTNAIYSVLAIFTGELYEIAG 673
F D SHP++ IYS L+ T +L + G
Sbjct: 871 TFMARDKSHPQSYEIYSKLSQITEKLAKEGG 901
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 119/498 (23%), Positives = 211/498 (42%), Gaps = 99/498 (19%)
Query: 6 LKEALICHVQAIKAGLTLTTI-TTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
L E H I + ++ + +L+ +Y K L ++ KLFD MP + +F+WN +I
Sbjct: 130 LSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIG 189
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
A + + G +L+L+ EM+ + I +D
Sbjct: 190 AYVTN--------------------------------GEPLGSLELYREMRVSG--IPLD 215
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
T L C L + G ++H +K + F +S++ MY+KC A ++F+
Sbjct: 216 ACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFD 275
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
E+ +++S N+M IS Y NG + E L
Sbjct: 276 RMPEKEDVVSWNSM--------------------------------ISAYSSNGQSIEAL 303
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
+LF M + + N +TF +AL AC +K IH+ VLK+ N FV++ ++ +Y
Sbjct: 304 RLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMY 363
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
+ G M EA F ++ + + + W ++ S
Sbjct: 364 ARF-------------------------------GKMGEAANIFYNMDDWDTISWNSMLS 392
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
G+V+ E + G D + ++ ++ A A G +IHAY ++ G+
Sbjct: 393 GFVQNGLYHEALQFYHE-MRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLD 451
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
D ++ ++LVDMY+K +M Y + IF ++D+V + +IA +A +G +A+ LF E+
Sbjct: 452 SDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREV 511
Query: 485 LEKGIKPDAVTFVAILSA 502
+GI D + +IL A
Sbjct: 512 QLEGIDLDVMMISSILLA 529
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 193/434 (44%), Gaps = 83/434 (19%)
Query: 117 ADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDA--SGFAVSSLIDMYSKCR 174
+ +DE +S L LC + G+Q+HA M+ TSN S F + L+ MY KC
Sbjct: 107 SPSQFSLDE-AYSSVLELCGSKKALSEGQQVHAHMI-TSNALFNSVFLSTRLVFMYGKCG 164
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
C +A ++F+G M KT + +WN +I Y
Sbjct: 165 CLVDAEKLFDG------------------------MPHKTIF---------TWNAMIGAY 191
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
V NG+ L+L+ M +G+ + TF L AC L++ +C E+H +K G +S
Sbjct: 192 VTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIV 251
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
FV++ IV +Y KC ++N AR+ FD + EK
Sbjct: 252 FVANSIVGMYTKCNDLN-------------------------------GARQLFDRMPEK 280
Query: 355 -NVVVWTALFSGYVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
+VV W ++ S Y Q+ EAL L E + K + + V L AC + + G
Sbjct: 281 EDVVSWNSMISAYSSNGQSIEAL-RLFGE-MQKASLAPNTYTFVAALQACEDSSFIKQGM 338
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
IHA +L+ ++ + + L+ MY++ G M A IF N + D + +N M++ + +G
Sbjct: 339 FIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNG 398
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYF-----NSMTADYKISP 527
+A+ + EM + G KPD V ++I++A G+ G + N + +D ++
Sbjct: 399 LYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGN 458
Query: 528 ETDHYACMIDLYGR 541
++D+Y +
Sbjct: 459 S------LVDMYAK 466
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 175/412 (42%), Gaps = 102/412 (24%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
RS N + H A+K GL N L+ +Y+K ++ +FD+MP+++V SW T
Sbjct: 431 RSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTT 490
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
II+ ++ G + AL+LF E+Q E I
Sbjct: 491 IIAGHAQN--------------------------------GSHSRALELFREVQL--EGI 516
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS-LIDMYSKCRCYEEAC 180
+D ++S L C L + +++H+++++ S + + ++D+Y +C + A
Sbjct: 517 DLDVMMISSILLACSGLKLISSVKEIHSYIIRKG--LSDLVLQNGIVDVYGECGNVDYAA 574
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
R+FE LI E D VSW ++IS YV NG A
Sbjct: 575 RMFE-------LI--------------------------EFKDVVSWTSMISCYVHNGLA 601
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
E L+LF M E GV + + S LSA L +K KEIH ++++ G + ++S +
Sbjct: 602 NEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTL 661
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
VD+Y +C G +E++R F+ + K++V+WT
Sbjct: 662 VDMYARC-------------------------------GTLEKSRNVFNFIRNKDLVLWT 690
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
++ + Y A DL + E + D + V +L AC+ ++ G+
Sbjct: 691 SMINAYGMHGCGRAAIDLFRR-MEDESIAPDHIAFVAVLYACSHSGLMNEGR 741
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 22/207 (10%)
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
++L DL + + + +A V+ L C + AL G+++HA+++ + +ST
Sbjct: 97 QSLTDLFANQSPSQFSLDEAYSSVLEL--CGSKKALSEGQQVHAHMITSNALFNSVFLST 154
Query: 433 -LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
LV MY KCG + AE +F + + +N MI Y +G ++ L+ EM GI
Sbjct: 155 RLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPL 214
Query: 492 DAVTFVAILSAF-----RHCGS----VEMGEKYFNSMTADYKISPETDHYACMIDLYGRA 542
DA TF IL A R CG+ + + E Y + + I + +Y +
Sbjct: 215 DACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSI----------VGMYTKC 264
Query: 543 NQLEKAIEFMKSIPTEEDAVILGSFLN 569
N L A + +P +ED V S ++
Sbjct: 265 NDLNGARQLFDRMPEKEDVVSWNSMIS 291
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 199/700 (28%), Positives = 349/700 (49%), Gaps = 70/700 (10%)
Query: 25 TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPH 84
T+ N ++ Y ++ + +RKLFD MP R+V SWNT+++ S +++AR+LF+ P
Sbjct: 126 TVAWNAMVTCYVQNGDITLARKLFDAMPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPE 185
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
++ V++ M+ GY+ E + A +F M E + ++ + S L+ L G
Sbjct: 186 RNGVSWTVMISGYVLIEQH-GRAWDMFRTMLC--EGMTPEQPNLVSVLSAVRHLGKPGIL 242
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSK-CRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
+H + KT + +++++ Y+K + A + FEG N + + ++AA
Sbjct: 243 ESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAAR-NEYTWSTIIAALS 301
Query: 204 REGEMEMALKTFWRQP------------------ELNDA------------VSWNTLISG 233
+ G ++ A + R P ++DA VSWN +I+G
Sbjct: 302 QAGRIDDAFAVYQRDPLKSVPSRTSMLTGLARYGRIDDAKILFDQIHEPNVVSWNAMITG 361
Query: 234 YVQNGDAEEGLKLFVRMG-ENGVRW------------NEHTFASALS------------- 267
Y+QN +E LF RM N + W +E S +
Sbjct: 362 YMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSL 421
Query: 268 -----ACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGV 322
AC + ++ K++HS +K G N +V + ++ +Y K ++ + V
Sbjct: 422 TSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTV 481
Query: 323 RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA-QNCEALFDLLSE 381
+++ S +S + +EAR F+++ +VV WT + S +A Q EA+ S
Sbjct: 482 KDTVSYNSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSM 541
Query: 382 FVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
+E + + IL ILLG A G++IH +++G+ + + LV MY KC
Sbjct: 542 LHERE--LPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCS 599
Query: 442 NMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
+ ++ F + ERD+ +N +I YA HG +AI +++ M+ G+ P+ VTFV +L
Sbjct: 600 SADSLKV-FDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLH 658
Query: 502 AFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDA 561
A H G V+ G ++F SM++DY ++P +HYACM+DL GRA ++ A F+ +P E D+
Sbjct: 659 ACSHSGLVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDS 718
Query: 562 VILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQM 621
VI + L C++++N E+ A EKL +E +N YV L+N+Y+++G W E+ ++RK M
Sbjct: 719 VIWSALLGACKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLM 778
Query: 622 RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+ N+ GCSW+ +++++H F GD H + IY+ L
Sbjct: 779 KERGVNKDPGCSWMQIKNKMHSFVTGDEEHEQIQNIYATL 818
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 118/258 (45%), Gaps = 39/258 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A+KAG + N LI +Y K+ + R++FD M ++ S+N+ +SA ++++
Sbjct: 441 HSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLF 500
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINA-EGYEADALKLFIEMQSADEHIRMDEFTVTST 131
+AR +F++ P D+V++ +++ A +G E A+++F M E T+
Sbjct: 501 DEARDVFNNMPSPDVVSWTTIISACAQADQGNE--AVEIFRSMLHERELPNPPILTI--L 556
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L L L G+Q+H +K D+ ++L+ MY KC ++ +VF+ E
Sbjct: 557 LGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSS-ADSLKVFDSMEER-- 613
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
D +WNT+I+GY Q+G E ++++ M
Sbjct: 614 -------------------------------DIFTWNTIITGYAQHGLGREAIRMYQLMV 642
Query: 252 ENGVRWNEHTFASALSAC 269
GV NE TF L AC
Sbjct: 643 SAGVLPNEVTFVGLLHAC 660
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 123/552 (22%), Positives = 232/552 (42%), Gaps = 71/552 (12%)
Query: 41 LRESRKLFDEMPERNVFSWNTII-------------------------------SACIKS 69
L E+R++FD MP R++ +WN++I S ++
Sbjct: 49 LHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLRTGTILLSGYARA 108
Query: 70 HDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVT 129
++ AR +FD ++ V +N+M+ Y+ G A KLF M S D T
Sbjct: 109 GRVRDARRVFDGMGVRNTVAWNAMVTCYVQ-NGDITLARKLFDAMPSRDVSSWNTMLTGY 167
Query: 130 STLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV----SSLIDMYSKCRCYEEACRVFEG 185
L + N+ F R V + SG+ + DM+ C EG
Sbjct: 168 CHSQLMEEARNL-FERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLC--------EG 218
Query: 186 CT-EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA-EEG 243
T E+ NL+S + V + G +E + D V +++GY ++ + +
Sbjct: 219 MTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSA 278
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
+K F M NE+T+++ ++A + A ++ ++ L S P +S + +
Sbjct: 279 VKFFEGMAAR----NEYTWSTIIAALSQAGRIDDAFAVYQ---RDPLKSVPSRTSMLTGL 331
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
+ ++ A+ + N S ++MI GY ++EA F+ + +N + W +
Sbjct: 332 -ARYGRIDDAKILFDQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMI 390
Query: 364 SGYVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
+GY + ++ +AL L + + ++G++ L AC+ AL GK++H+ ++ G
Sbjct: 391 AGYARNGRSEQALVSL--QALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAG 448
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
Q + + + L+ +Y K ++ IF +D V YN ++ + ++A +F
Sbjct: 449 CQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFN 508
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGE---KYFNSMTADYKISPETDHYACMIDLY 539
M PD V++ I+SA C + G + F SM + ++ P ++ L
Sbjct: 509 NM----PSPDVVSWTTIISA---CAQADQGNEAVEIFRSMLHEREL-PNPPILTILLGLS 560
Query: 540 GR--ANQLEKAI 549
G A QL + I
Sbjct: 561 GNLGAPQLGQQI 572
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 169/393 (43%), Gaps = 49/393 (12%)
Query: 194 SKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGEN 253
+++A + R G + A + F P D ++WN++I Y NG + G L +
Sbjct: 35 AQSARIRELGRLGRLHEAREVFDSMP-FRDIIAWNSMIFAYCNNGMPDAGRSLADAISGG 93
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL-ISNPFVSSGIVDVYCKCENMNY 312
+R T LS V+ A+ + +G+ + N + +V Y + ++
Sbjct: 94 NLR----TGTILLSGYARAGRVRDARRVF-----DGMGVRNTVAWNAMVTCYVQNGDITL 144
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
A + R+ S ++M+ GY MEEAR F+ + E+N V WT + SGYV +
Sbjct: 145 ARKLFDAMPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQH 204
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG--KEIHAYILRMGVQMDKKLI 430
+D+ + EG+ + LV +L A++ PG + IH + + G + D +
Sbjct: 205 GRAWDMFRTMLC-EGMTPEQPNLVSVL--SAVRHLGKPGILESIHVLVHKTGFERDVVVG 261
Query: 431 STLVDMYSKCGNMTYAEI-IFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+ +++ Y+K NM + + F+ R+ ++ +IA + G + A +++ K +
Sbjct: 262 TAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSV 321
Query: 490 ---------------------------KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTAD 522
+P+ V++ A+++ + V+ E FN M
Sbjct: 322 PSRTSMLTGLARYGRIDDAKILFDQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFR 381
Query: 523 YKISPETDHYACMIDLYGRANQLEKAIEFMKSI 555
IS +A MI Y R + E+A+ ++++
Sbjct: 382 NTIS-----WAGMIAGYARNGRSEQALVSLQAL 409
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 186/614 (30%), Positives = 321/614 (52%), Gaps = 70/614 (11%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
+++V N ++S K + L R +FD +D V++N+M+CGY YE +++KLF+
Sbjct: 307 KKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYE-ESIKLFM 365
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
EM + + D T+TS L C L ++ FG+ +H +M+ + + A + LI+MY+K
Sbjct: 366 EMVN---QFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAK 422
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C + VF G C+ D+VSWN++I+
Sbjct: 423 CGNLLASQEVFSGMK---------------CK------------------DSVSWNSMIN 449
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
Y+QNG +E +KLF +M + V+ + T+ LS L ++ KE+H + K G S
Sbjct: 450 VYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNS 508
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
N VS+ +VD+Y KC G M ++ + F+++
Sbjct: 509 NIVVSNTLVDMYAKC-------------------------------GEMGDSLKVFENMK 537
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
++++ W + + V +++C ++S T EGV D ++ +L C+L AA GK
Sbjct: 538 ARDIITWNTIIASCVHSEDCNLGLRMISRMRT-EGVTPDMATMLSILPVCSLLAAKRQGK 596
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
EIH I ++G++ D + + L++MYSKCG++ + +F+ +D+V + +I+ +G
Sbjct: 597 EIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYG 656
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
+KA+ F EM GI PD V FVAI+ A H G VE G YF+ M DYKI P +HY
Sbjct: 657 EGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHY 716
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
AC++DL R+ L+KA +F+ S+P + D+ I G+ L+ CR++ + E+A E+++ L
Sbjct: 717 ACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIELNP 776
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
++ YV ++NVYAA G W ++ IRK ++ + GCSW+ +++++++F G
Sbjct: 777 DDTGYYVLVSNVYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFSE 836
Query: 653 KTNAIYSVLAIFTG 666
+ + +L + G
Sbjct: 837 QFEEVNKLLGMLAG 850
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 135/548 (24%), Positives = 241/548 (43%), Gaps = 103/548 (18%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFD-EMPERNVFSWNTIISACIKSHD 71
H I GL + I + +LI Y+ S +F P NV+ WN+II A
Sbjct: 95 HSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRA------ 148
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
+T+N + ++AL L+ E Q ++ D +T S
Sbjct: 149 ----------------LTHNGLF----------SEALSLYSETQRI--RLQPDTYTFPSV 180
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
+N C LL+ + +H ++ + + ++LIDMY
Sbjct: 181 INACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMY--------------------- 219
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
CR +++ A K F P L D VSWN+LISGY NG E L+++ R
Sbjct: 220 -----------CRFNDLDKARKVFEEMP-LRDVVSWNSLISGYNANGYWNEALEIYYRFR 267
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
GV + +T +S L AC GL +V+ IH + K G+ + V++G++ +YCK +
Sbjct: 268 NLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLI 327
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
+ +R++ S ++MI GYS G EE+ + F
Sbjct: 328 DGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLF----------------------- 364
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
+++++F D L + +L AC L GK +H Y++ G + D +
Sbjct: 365 ----MEMVNQF------KPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASN 414
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
L++MY+KCGN+ ++ +F +D V +N MI Y +G ++A+ LF +M++ +KP
Sbjct: 415 ILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKP 473
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
D+VT+V +LS G + +G++ + A + ++D+Y + ++ +++
Sbjct: 474 DSVTYVMLLSMSTQLGDLXLGKELHCDL-AKMGFNSNIVVSNTLVDMYAKCGEMGDSLKV 532
Query: 552 MKSIPTEE 559
+++ +
Sbjct: 533 FENMKARD 540
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 163/350 (46%), Gaps = 37/350 (10%)
Query: 222 NDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEI 281
N+ WN++I NG E L L+ ++ + +TF S ++AC GL + + AK I
Sbjct: 137 NNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSI 196
Query: 282 HSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNM 341
H VL G S+ ++ + ++D+YC+ +++ A + +R+ S +S+I GY+ G
Sbjct: 197 HDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG-- 254
Query: 342 EEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGA 401
W Y + +N GVV D+ + +L A
Sbjct: 255 ----------------YWNEALEIYYRFRNL--------------GVVPDSYTMSSVLRA 284
Query: 402 CALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLY 461
C ++ G IH I ++G++ D + + L+ MY K + IF + RD V +
Sbjct: 285 CGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSW 344
Query: 462 NVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSM-T 520
N MI Y+ G E++I LF EM+ + KPD +T +IL A H G +E G+ + M T
Sbjct: 345 NTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMIT 403
Query: 521 ADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNV 570
+ Y+ +T +I++Y + L + E + +D+V S +NV
Sbjct: 404 SGYEC--DTTASNILINMYAKCGNLLASQEVFSGMKC-KDSVSWNSMINV 450
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 111/244 (45%), Gaps = 38/244 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H K G + +N L+ +Y+K + +S K+F+ M R++ +WNTII++C+ S D
Sbjct: 498 HCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSED- 556
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
C L++ M++ E + D T+ S L
Sbjct: 557 ----------------------CNL---------GLRMISRMRT--EGVTPDMATMLSIL 583
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+C L G+++H + K ++ + LI+MYSKC + +VF+ + ++
Sbjct: 584 PVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFK-LMKTKDV 642
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPE---LNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
++ A+++AC GE + A++ F + D V++ +I +G EEGL F R
Sbjct: 643 VTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHR 702
Query: 250 MGEN 253
M ++
Sbjct: 703 MKKD 706
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 214/723 (29%), Positives = 351/723 (48%), Gaps = 104/723 (14%)
Query: 17 IKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQAR 76
IK G T +N ++ + + +RK++DEMP +N S NT+IS +K+ D+ AR
Sbjct: 40 IKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSAR 99
Query: 77 SLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCV 136
LFD+ P + +VT+ ++L G+ + +A KLF +M + D T T+ L C
Sbjct: 100 DLFDAMPDRTVVTW-TILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCN 158
Query: 137 KLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKN 196
+ Q+HAF VK D + F L N
Sbjct: 159 DAVPQNAVGQVHAFAVKLGFDTNPF------------------------------LTVSN 188
Query: 197 AMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVR 256
++ + C +++A F PE D+V++NTLI+GY ++G E + LF++M ++G +
Sbjct: 189 VLLKSYCEVRRLDLACVLFEEIPE-KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQ 247
Query: 257 WNEHTFASALSACCGLRNVKCAKEI-------------------------HSWVLKNGLI 291
++ TF+ L A GL + +++ H VL+ ++
Sbjct: 248 PSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRML 307
Query: 292 SN-----PFVSSGIV-DVYCKCE----NMNYAESMLLLKGVRNSFSISSMI--------- 332
+ FVS +V Y + + ++++ M + R +F ++M+
Sbjct: 308 FDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSL 367
Query: 333 -VGYSLQ--------------GN-----------MEEARRHFDSLTEKNVVVWTALFSGY 366
+G L GN EEA F SL ++ V WTAL SGY
Sbjct: 368 QMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGY 427
Query: 367 VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMD 426
V+ A L ++ + + D +L A A A+L GK++HA+I+R G +
Sbjct: 428 VQKGLHGAGLKLFTK-MRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLEN 486
Query: 427 KKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
S LVDMY+KCG++ A +F+ +R+ V +N +I+ +A +G E AI F +M+E
Sbjct: 487 VFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIE 546
Query: 487 KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLE 546
G++PD+V+ + +L+A HCG VE G +YF +M+ Y I+P+ HYACM+DL GR +
Sbjct: 547 SGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFA 606
Query: 547 KAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG-NNKARYVQLANVY 605
+A + M +P E D ++ S LN CR+++N LA A EKL +E + A YV ++N+Y
Sbjct: 607 EAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIY 666
Query: 606 AAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFT 665
AA G W ++ ++K MR + SWV V H+IH+F+ D +HP + I + T
Sbjct: 667 AAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELT 726
Query: 666 GEL 668
E+
Sbjct: 727 AEI 729
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 130/504 (25%), Positives = 219/504 (43%), Gaps = 109/504 (21%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H ++ G + NQ++ YSKH+ + E+R LFDEMPE + S+N +IS+
Sbjct: 273 HALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISS------- 325
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
Y A+ YEA +L F EMQ R F + L
Sbjct: 326 ------------------------YSQADQYEA-SLHFFREMQCMGFDRR--NFPFATML 358
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
++ L ++ GRQLH + + D+ +SL+DMY+KC +EEA +F+ +
Sbjct: 359 SIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTT- 417
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
VSW LISGYVQ G GLKLF +M
Sbjct: 418 --------------------------------VSWTALISGYVQKGLHGAGLKLFTKMRG 445
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+ +R ++ TFA+ L A ++ K++H++++++G + N F SG+VD+Y KC
Sbjct: 446 SNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKC----- 500
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G++++A + F+ + ++N V W AL S + +
Sbjct: 501 --------------------------GSIKDAVQVFEEMPDRNAVSWNALISAHADNGDG 534
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE-IHAYILRMGVQMDKKLIS 431
EA ++ + + G+ D++ ++ +L AC+ + G E A G+ KK +
Sbjct: 535 EAAIGAFAKMI-ESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYA 593
Query: 432 TLVDMYSKCGNMTYAEIIFQNF-IERDLVLY-NVMIACYAHHGH---EEKAILLFEEMLE 486
++D+ + G AE + E D +++ +V+ AC H E A LF +E
Sbjct: 594 CMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFS--ME 651
Query: 487 KGIKPDAVTFVAILSAFRHCGSVE 510
K DA +V++ + + G E
Sbjct: 652 K--LRDAAAYVSMSNIYAAAGEWE 673
>gi|356519224|ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Glycine max]
Length = 805
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 218/778 (28%), Positives = 355/778 (45%), Gaps = 147/778 (18%)
Query: 2 RSLNLKEALICHVQAIKAGLT--LTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSW 59
R+L L AL H IK G T L ++L+ +Y+K + +LF + P NVFSW
Sbjct: 65 RALPL--ALQLHADVIKRGPTFALNDFVISKLVILYAKCGASEPATRLFRDSPSPNVFSW 122
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
II G G+ +AL +I+MQ +
Sbjct: 123 AAII--------------------------------GLHTRTGFCEEALFGYIKMQ--QD 148
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSN-DASGFAVSSLIDMYSKCRCYEE 178
+ D F + + L C L V FG+ +HAF+VKT + +SL+DMY KC E+
Sbjct: 149 GLPPDNFVLPNVLKACGVLKWVRFGKGVHAFVVKTIGLKECVYVATSLVDMYGKCGAVED 208
Query: 179 ACRVFEGCTE----------------------------------EVNLISKNAMVAACC- 203
A +VF+ +E EV L++ + AC
Sbjct: 209 AGKVFDEMSERNDVTWNSMVVTYAQNGMNQEAIRVFREMRLQGVEVTLVALSGFFTACAN 268
Query: 204 -------REG---------EMEMAL-----------------KTFWRQPELNDAVSWNTL 230
R+G E++ L + +R + D V+WN +
Sbjct: 269 SEAVGEGRQGHGLAVVGGLELDNVLGSSIMNFYFKVGLIEEAEVVFRNMAVKDVVTWNLV 328
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL 290
++GY Q G E+ L++ M E G+R++ T ++ L+ R++ + H++ +KN
Sbjct: 329 VAGYAQFGMVEKALEMCCVMREEGLRFDCVTLSALLAVAADTRDLVLGMKAHAYCVKNDF 388
Query: 291 ISNPFVSSGIVDVYCKCENMNYAE-----------------------------------S 315
+ VSSGI+D+Y KC M+ A
Sbjct: 389 EGDVVVSSGIIDMYAKCGRMDCARRVFSCVRKKDIVLWNTMLAACAEQGLSGEALKLFFQ 448
Query: 316 MLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE----KNVVVWTALFSGYVKAQN 371
M L N S +S+I G+ G + EAR F + N++ WT + SG V+
Sbjct: 449 MQLESVPPNVVSWNSLIFGFFKNGQVAEARNMFAEMCSSGVMPNLITWTTMMSGLVQNGF 508
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
+ E + G+ +++ + L C A L G+ IH Y++R + +I+
Sbjct: 509 GSGAMMVFRE-MQDVGIRPNSMSITSALSGCTSMALLKHGRAIHGYVMRRDLSQSIHIIT 567
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
+++DMY+KCG++ A+ +F+ ++L +YN MI+ YA HG +A++LF++M ++GI P
Sbjct: 568 SIMDMYAKCGSLDGAKCVFKMCSTKELYVYNAMISAYASHGQAREALVLFKQMEKEGIVP 627
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
D +T ++LSA H G ++ G K F M ++ ++ P +HY C++ L QL++A+
Sbjct: 628 DHITLTSVLSACSHGGLMKEGIKVFKYMVSELQMKPSEEHYGCLVKLLANDGQLDEALRT 687
Query: 552 MKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNW 611
+ ++P+ DA ILGS L C N + ELA + LL+L+ +N YV L+NVYAA G W
Sbjct: 688 ILTMPSHPDAHILGSLLTACGQNNDIELADYIAKWLLKLDPDNSGNYVALSNVYAAVGKW 747
Query: 612 AEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELY 669
++ +R M+ + GCSW+ V E+H+F D SHPKT IY L + E++
Sbjct: 748 DKVSNLRGLMKEKGLRKIPGCSWIEVGQELHVFIASDRSHPKTEEIYVTLDLLGFEMH 805
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 185/614 (30%), Positives = 321/614 (52%), Gaps = 70/614 (11%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
+++V N ++S K + L R +FD +D V++N+M+CGY YE +++KLF+
Sbjct: 248 KKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYE-ESIKLFM 306
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
EM + + D T+TS L C L ++ FG+ +H +M+ + + A + LI+MY+K
Sbjct: 307 EMVN---QFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAK 363
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C + VF G C+ D+VSWN++I+
Sbjct: 364 CGNLLASQEVFSGMK---------------CK------------------DSVSWNSMIN 390
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
Y+QNG +E +KLF +M + V+ + T+ LS L ++ KE+H + K G S
Sbjct: 391 VYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNS 449
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
N VS+ +VD+Y KC G M ++ + F+++
Sbjct: 450 NIVVSNTLVDMYAKC-------------------------------GEMGDSLKVFENMK 478
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
++++ W + + V +++C ++S T EGV D ++ +L C+L AA GK
Sbjct: 479 ARDIITWNTIIASCVHSEDCNLGLRMISRMRT-EGVTPDMATMLSILPVCSLLAAKRQGK 537
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
EIH I ++G++ D + + L++MYSKCG++ + +F+ +D+V + +I+ +G
Sbjct: 538 EIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYG 597
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
+KA+ F EM GI PD V FVAI+ A H G VE G YF+ M DYKI P +HY
Sbjct: 598 EGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHY 657
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
AC++DL R+ L+KA +F+ S+P + D+ I G+ L+ CR++ + E+A E+++ L
Sbjct: 658 ACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNP 717
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
++ YV ++N+YAA G W ++ IRK ++ + GCSW+ +++++++F G
Sbjct: 718 DDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFE 777
Query: 653 KTNAIYSVLAIFTG 666
+ + +L + G
Sbjct: 778 QFEEVNKLLGMLAG 791
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 135/548 (24%), Positives = 241/548 (43%), Gaps = 103/548 (18%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFD-EMPERNVFSWNTIISACIKSHD 71
H I GL + I + +LI Y+ S +F P NV+ WN+II A
Sbjct: 36 HSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRA------ 89
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
+T+N + ++AL L+ E Q ++ D +T S
Sbjct: 90 ----------------LTHNGLF----------SEALSLYSETQRI--RLQPDTYTFPSV 121
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
+N C LL+ + +H ++ + + ++LIDMY
Sbjct: 122 INACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMY--------------------- 160
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
CR +++ A K F P L D VSWN+LISGY NG E L+++ R
Sbjct: 161 -----------CRFNDLDKARKVFEEMP-LRDVVSWNSLISGYNANGYWNEALEIYYRFR 208
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
GV + +T +S L AC GL +V+ IH + K G+ + V++G++ +YCK +
Sbjct: 209 NLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLI 268
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
+ +R++ S ++MI GYS G EE+ + F
Sbjct: 269 DGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLF----------------------- 305
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
+++++F D L + +L AC L GK +H Y++ G + D +
Sbjct: 306 ----MEMVNQF------KPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASN 355
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
L++MY+KCGN+ ++ +F +D V +N MI Y +G ++A+ LF +M++ +KP
Sbjct: 356 ILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKP 414
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
D+VT+V +LS G + +G++ + A + ++D+Y + ++ +++
Sbjct: 415 DSVTYVMLLSMSTQLGDLHLGKELHCDL-AKMGFNSNIVVSNTLVDMYAKCGEMGDSLKV 473
Query: 552 MKSIPTEE 559
+++ +
Sbjct: 474 FENMKARD 481
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 163/350 (46%), Gaps = 37/350 (10%)
Query: 222 NDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEI 281
N+ WN++I NG E L L+ ++ + +TF S ++AC GL + + AK I
Sbjct: 78 NNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSI 137
Query: 282 HSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNM 341
H VL G S+ ++ + ++D+YC+ +++ A + +R+ S +S+I GY+ G
Sbjct: 138 HDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG-- 195
Query: 342 EEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGA 401
W Y + +N GVV D+ + +L A
Sbjct: 196 ----------------YWNEALEIYYRFRNL--------------GVVPDSYTMSSVLRA 225
Query: 402 CALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLY 461
C ++ G IH I ++G++ D + + L+ MY K + IF + RD V +
Sbjct: 226 CGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSW 285
Query: 462 NVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSM-T 520
N MI Y+ G E++I LF EM+ + KPD +T +IL A H G +E G+ + M T
Sbjct: 286 NTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMIT 344
Query: 521 ADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNV 570
+ Y+ +T +I++Y + L + E + +D+V S +NV
Sbjct: 345 SGYEC--DTTASNILINMYAKCGNLLASQEVFSGMKC-KDSVSWNSMINV 391
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 111/244 (45%), Gaps = 38/244 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H K G + +N L+ +Y+K + +S K+F+ M R++ +WNTII++C+ S D
Sbjct: 439 HCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSED- 497
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
C L++ M++ E + D T+ S L
Sbjct: 498 ----------------------CNL---------GLRMISRMRT--EGVTPDMATMLSIL 524
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+C L G+++H + K ++ + LI+MYSKC + +VF+ + ++
Sbjct: 525 PVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFK-LMKTKDV 583
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPE---LNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
++ A+++AC GE + A++ F + D V++ +I +G EEGL F R
Sbjct: 584 VTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHR 643
Query: 250 MGEN 253
M ++
Sbjct: 644 MKKD 647
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 196/614 (31%), Positives = 314/614 (51%), Gaps = 72/614 (11%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N++I+ +K ++++AR LFD + K +VT+NSM+ GY A G + +AL +F M+
Sbjct: 237 NSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA-ANGLDLEALGMFYSMRL--N 293
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
H+R+ E + S + LC L + F QLH +VK ++L+ YSKC +A
Sbjct: 294 HVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDA 353
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
R+F+ E L + VSW +ISG++QN
Sbjct: 354 LRLFK----ETGF----------------------------LGNVVSWTAMISGFLQNDG 381
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
EE + LF M GVR NE T++ L+A V E+H+ V+K + V +
Sbjct: 382 KEEAVGLFSEMKRKGVRPNEFTYSVILTAL----PVISPSEVHAQVVKTNYERSSTVGTA 437
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
++D Y K G ++EA + F + K++V W
Sbjct: 438 LLDAYVKL-------------------------------GKVDEAAKVFSGIDNKDIVAW 466
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACA-LQAALHPGKEIHAYI 418
+A+ +GY +A EA + SE +TK GV + +L CA A++ GK+ H +
Sbjct: 467 SAMLAGYAQAGETEAAIKIFSE-LTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFA 525
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
++ + + S L+ MY+K G++ AE +F+ E+DLV +N MI+ YA HG KA+
Sbjct: 526 IKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKAL 585
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
+F+EM ++ +K D+VTF+ + +A H G VE GEKYF+ M D KI+P +H +CM+DL
Sbjct: 586 DVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDL 645
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARY 598
Y RA QLEKA++ + ++P + I + L CR+++ EL A EK++ + + A Y
Sbjct: 646 YSRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRVHKKTELGRLAAEKIIAMIPEDSAAY 705
Query: 599 VQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
V L+N+YA G+W E ++RK M + G SW+ V+++ + F GD SHP + IY
Sbjct: 706 VLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYAFLAGDRSHPLKDQIY 765
Query: 659 SVLAIFTGELYEIA 672
L + L ++
Sbjct: 766 MKLEDLSTRLKDLG 779
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 148/580 (25%), Positives = 246/580 (42%), Gaps = 129/580 (22%)
Query: 69 SHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
S L A +LFD SP +D +Y S+L G+ + +G +A +LF+ +Q + MD
Sbjct: 44 SSRLYYAHNLFDKSPDRDRESYTSLLFGF-SRDGRTQEATRLFLNIQHLG--MEMDCSIF 100
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTS--NDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
+S L + L + FGRQLH +K +D S +SL+D Y K +++ VF+
Sbjct: 101 SSVLKVSATLCDELFGRQLHCQCIKFGFLDDVS--VGTSLVDTYMKGSNFKDGRNVFDEM 158
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
E + V+W TLISGY +N EE L L
Sbjct: 159 KER---------------------------------NVVTWTTLISGYARNSLNEEVLTL 185
Query: 247 FVRMGENGVRWNEHTFASALSACC----GLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
F+RM + G + N TFA+AL G R + ++H+ V+KNGL VS+ +++
Sbjct: 186 FMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGL----QVHTVVVKNGLDKTIPVSNSLIN 241
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
+Y KC N+ A + V++ + +SMI GY+ G EA F S+ +V + +
Sbjct: 242 LYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESS 301
Query: 363 FS-------------------------GYVKAQN-----------CEALFDLLSEF---- 382
F+ G+V QN C A+ D L F
Sbjct: 302 FASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETG 361
Query: 383 ------------------------------VTKEGVVTDALILVILLGACALQAALHPGK 412
+ ++GV + ++L A + + P
Sbjct: 362 FLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPV---ISPS- 417
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
E+HA +++ + + + L+D Y K G + A +F +D+V ++ M+A YA G
Sbjct: 418 EVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAG 477
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCG--SVEMGE-KYFNSMTADYKISPET 529
E AI +F E+ + G+KP+ TF +IL+ C + MG+ K F+ ++
Sbjct: 478 ETEAAIKIFSELTKGGVKPNEFTFSSILNV---CAATTASMGQGKQFHGFAIKSRLDSSL 534
Query: 530 DHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLN 569
+ ++ +Y + +E A E K E+D V S ++
Sbjct: 535 CVSSALLTMYAKKGHIESAEEVFKR-QREKDLVSWNSMIS 573
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 108/218 (49%), Gaps = 37/218 (16%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
ER+ ++ A +K + +A +F +KD+V +++ML GY A EA A+K+F
Sbjct: 429 ERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEA-AIKIFS 487
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLL-NVGFGRQLHAFMVKTSNDASGFAVSSLIDMYS 171
E+ ++ +EFT +S LN+C ++G G+Q H F +K+ D+S S+L+ MY+
Sbjct: 488 ELTKGG--VKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYA 545
Query: 172 KCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLI 231
K +G +E A + F RQ E D VSWN++I
Sbjct: 546 K--------------------------------KGHIESAEEVFKRQRE-KDLVSWNSMI 572
Query: 232 SGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
SGY Q+G A + L +F M + V+ + TF +AC
Sbjct: 573 SGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAAC 610
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 89/211 (42%), Gaps = 40/211 (18%)
Query: 303 VYC----KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
+YC + YA ++ R+ S +S++ G+S G +EA R F ++ + +
Sbjct: 36 IYCFGAASSSRLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEM 95
Query: 359 WTALFSGYVK--AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHA 416
++FS +K A C+ LF G+++H
Sbjct: 96 DCSIFSSVLKVSATLCDELF----------------------------------GRQLHC 121
Query: 417 YILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
++ G D + ++LVD Y K N +F ER++V + +I+ YA + E+
Sbjct: 122 QCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYARNSLNEE 181
Query: 477 AILLFEEMLEKGIKPDAVTFVAILSAFRHCG 507
+ LF M ++G +P++ TF A L G
Sbjct: 182 VLTLFMRMQDEGTQPNSFTFAAALGVLAEEG 212
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 191/620 (30%), Positives = 316/620 (50%), Gaps = 75/620 (12%)
Query: 57 FSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQS 116
F ++ +K +++ AR LFD +DLVT+ M+ GY G ++L LF +M+
Sbjct: 66 FVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAEC-GKANESLVLFEKMR- 123
Query: 117 ADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCY 176
+E + D+ + + + C KL + R + ++ + +++IDMY+KC C
Sbjct: 124 -EEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCV 182
Query: 177 EEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQ 236
E A +F+ EE N+IS W+ +I+ Y
Sbjct: 183 ESAREIFDR-MEEKNVIS--------------------------------WSAMIAAYGY 209
Query: 237 NGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFV 296
+G + L LF M +G+ ++ T AS L AC L+N++ + IH V K GL + FV
Sbjct: 210 HGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFV 269
Query: 297 SSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNV 356
+ +VD+Y KC + E+AR FD + E+++
Sbjct: 270 CAALVDMYGKCREI-------------------------------EDARFLFDKMPERDL 298
Query: 357 VVWTALFSGYVKAQNCE---ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
V WT + GY + N LFD + E EGVV D + +V ++ ACA A+H +
Sbjct: 299 VTWTVMIGGYAECGNANESLVLFDKMRE----EGVVPDKVAMVTVVFACAKLGAMHKART 354
Query: 414 IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH 473
I YI R Q+D L + ++DM++KCG + A IF E++++ ++ MIA Y +HG
Sbjct: 355 IDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQ 414
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA 533
KA+ LF ML GI P+ +T V++L A H G VE G ++F+ M DY + + HY
Sbjct: 415 GRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYT 474
Query: 534 CMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGN 593
C++DL GRA +L++A++ ++S+ E+D + G+FL CR +++ LA +A LL L+
Sbjct: 475 CVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQ 534
Query: 594 NKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPK 653
N Y+ L+N+YA G W ++ + R M + + G +W+ V+++ H F+VGD +HP+
Sbjct: 535 NPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPR 594
Query: 654 TNAIYSVLAIFTGELYEIAG 673
+ IY +L +L E+ G
Sbjct: 595 SKEIYEMLKSLGNKL-ELVG 613
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 192/442 (43%), Gaps = 68/442 (15%)
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
R D +T+ + C L N+ GR +H + K D F ++L+DMY KCR E+A
Sbjct: 27 RPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARF 86
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F+ E D V+W +I GY + G A
Sbjct: 87 LFDKMQE---------------------------------RDLVTWTVMIGGYAECGKAN 113
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E L LF +M E GV ++ + + AC L + A+ I ++ + + + + ++
Sbjct: 114 ESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMI 173
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D+Y KC G +E AR FD + EKNV+ W+A
Sbjct: 174 DMYAKC-------------------------------GCVESAREIFDRMEEKNVISWSA 202
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+ + Y DL ++ G++ D + L LL AC+ L G+ IH + +
Sbjct: 203 MIAAYGYHGQGRKALDLFRMMLS-SGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKF 261
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
G+ +D + + LVDMY KC + A +F ERDLV + VMI YA G+ ++++LF
Sbjct: 262 GLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLF 321
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGR 541
++M E+G+ PD V V ++ A G++ + + K + MID++ +
Sbjct: 322 DKMREEGVVPDKVAMVTVVFACAKLGAMHKA-RTIDDYIQRKKFQLDVILGTAMIDMHAK 380
Query: 542 ANQLEKAIEFMKSIPTEEDAVI 563
+E A E + EE VI
Sbjct: 381 CGCVESAREIFDRM--EEKNVI 400
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 165/338 (48%), Gaps = 44/338 (13%)
Query: 230 LISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG 289
++ G+ + GD F + G R + +T + AC L+N++ + IH V K G
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 290 LISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFD 349
L + FV + +VD+Y KC +E+AR FD
Sbjct: 61 LDLDHFVCAALVDMYVKCR-------------------------------EIEDARFLFD 89
Query: 350 SLTEKNVVVWTALFSGYV---KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQA 406
+ E+++V WT + GY KA LF+ + E EGVV D + +V ++ ACA
Sbjct: 90 KMQERDLVTWTVMIGGYAECGKANESLVLFEKMRE----EGVVPDKVAMVTVVFACAKLG 145
Query: 407 ALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIA 466
A+H + I YI R Q+D L + ++DMY+KCG + A IF E++++ ++ MIA
Sbjct: 146 AMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIA 205
Query: 467 CYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKIS 526
Y +HG KA+ LF ML G+ PD +T ++L A +++MG + + YK
Sbjct: 206 AYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIV---YKFG 262
Query: 527 PETDHYAC--MIDLYGRANQLEKAIEFMKSIPTEEDAV 562
+ DH+ C ++D+YG+ ++E A +P E D V
Sbjct: 263 LDLDHFVCAALVDMYGKCREIEDARFLFDKMP-ERDLV 299
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 185/451 (41%), Gaps = 102/451 (22%)
Query: 23 LTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSS 82
L I +I +Y+K + +R++FD M E+NV SW+ +I+A
Sbjct: 164 LDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAA----------------- 206
Query: 83 PHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVG 142
GY G AL LF M S+ + D+ T+ S L C L N+
Sbjct: 207 ------------YGY---HGQGRKALDLFRMMLSSG--MLPDKITLASLLYACSDLKNLQ 249
Query: 143 FGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAAC 202
GR +H + K D F ++L+DMY KCR E+A +F+
Sbjct: 250 MGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFD------------------ 291
Query: 203 CREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTF 262
+ PE D V+W +I GY + G+A E L LF +M E GV ++
Sbjct: 292 --------------KMPE-RDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAM 336
Query: 263 ASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGV 322
+ + AC L + A+ I ++ + + + + ++D++ KC
Sbjct: 337 VTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKC--------------- 381
Query: 323 RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF 382
G +E AR FD + EKNV+ W+A+ + Y DL
Sbjct: 382 ----------------GCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFP-M 424
Query: 383 VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR-MGVQMDKKLISTLVDMYSKCG 441
+ + G++ + + LV LL AC+ + G + + V+ D K + +VD+ + G
Sbjct: 425 MLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAG 484
Query: 442 NMTYA-EIIFQNFIERDLVLYNVMI-ACYAH 470
+ A ++I +E+D L+ + AC H
Sbjct: 485 RLDEALKLIESMTVEKDEGLWGAFLGACRTH 515
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 107/257 (41%), Gaps = 44/257 (17%)
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+ G+ K + F E + + G D L ++ AC L G+ IH + +
Sbjct: 1 MVGGFAKVGDYINCFGTFRELI-RCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKF 59
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
G+ +D + + LVDMY KC + A +F ERDLV + VMI YA G ++++LF
Sbjct: 60 GLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLF 119
Query: 482 EEMLEKGIKPDAVTFV-----------------------------------AILSAFRHC 506
E+M E+G+ PD V V A++ + C
Sbjct: 120 EKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKC 179
Query: 507 GSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE---EDAVI 563
G VE + F+ M IS ++ MI YG Q KA++ + + + D +
Sbjct: 180 GCVESAREIFDRMEEKNVIS-----WSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKIT 234
Query: 564 LGSFLNVCRLNRNAELA 580
L S L C +N ++
Sbjct: 235 LASLLYACSDLKNLQMG 251
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 112/252 (44%), Gaps = 38/252 (15%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
NL+ + H K GL L L+ +Y K + ++R LFD+MPER++ +W +I
Sbjct: 247 NLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIG 306
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
+ CG N ++L LF +M+ +E + D
Sbjct: 307 GYAE--------------------------CGNAN------ESLVLFDKMR--EEGVVPD 332
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
+ + + + C KL + R + ++ + +++IDM++KC C E A +F+
Sbjct: 333 KVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFD 392
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTF---WRQPELNDAVSWNTLISGYVQNGDAE 241
EE N+IS +AM+AA G+ AL F R L + ++ +L+ G E
Sbjct: 393 R-MEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVE 451
Query: 242 EGLKLFVRMGEN 253
EGL+ F M E+
Sbjct: 452 EGLRFFSLMWED 463
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 203/670 (30%), Positives = 340/670 (50%), Gaps = 73/670 (10%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPER----NVFSWNTII 63
EAL + +KAG+ T T + + ++ ++ + + +V+ N ++
Sbjct: 143 EALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALV 202
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
+ ++ + +A +F + KD+VT+NSML G+I G ++AL+ F ++Q+AD ++
Sbjct: 203 AMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQ-NGLYSEALEFFYDLQNAD--LKP 259
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
D+ ++ S + +L + G+++HA+ +K D++ ++LIDMY+KC C R F
Sbjct: 260 DQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAF 319
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
+ MA K D +SW T +GY QN +
Sbjct: 320 D------------------------LMAHK---------DLISWTTAAAGYAQNKCYLQA 346
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
L+L ++ G+ + S L AC GL + KEIH + ++ GL S+P + + I+DV
Sbjct: 347 LELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGL-SDPVLQNTIIDV 405
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y +C ++YA R F+S+ K+VV WT++
Sbjct: 406 YGECGIIDYA-------------------------------VRIFESIECKDVVSWTSMI 434
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
S YV ++ S + + G+ D + LV +L A + L GKEIH +I+R G
Sbjct: 435 SCYVHNGLANKALEVFSS-MKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGF 493
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
++ + +TLVDMY++CG++ A IF R+L+L+ MI+ Y HG+ E A+ LF
Sbjct: 494 ILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMR 553
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRAN 543
M ++ I PD +TF+A+L A H G V G+ + M +Y++ P +HY C++DL GR N
Sbjct: 554 MKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRN 613
Query: 544 QLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLAN 603
LE+A + +KS+ E + + L CR++ N E+ A EKLL L+ +N YV ++N
Sbjct: 614 CLEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEVAAEKLLELDLDNPGNYVLVSN 673
Query: 604 VYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAI 663
V+AA G W ++ +R +M+G + GCSW+ V ++IH F D HP+ + IY LA
Sbjct: 674 VFAANGRWKDVEEVRMRMKGSGLTKNPGCSWIEVGNKIHAFLSRDKLHPECDKIYQKLAQ 733
Query: 664 FTGELYEIAG 673
T +L G
Sbjct: 734 VTEKLKREGG 743
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 154/553 (27%), Positives = 246/553 (44%), Gaps = 106/553 (19%)
Query: 1 MRSLNLKEALIC----HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERN- 55
+++ + E L C H AIK G N L+ +Y+K N + +RKLFD M RN
Sbjct: 65 LKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRND 124
Query: 56 VFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQ 115
V SWN+IISA + G +AL LF EM
Sbjct: 125 VVSWNSIISA--------------------------------YSGNGMCTEALCLFSEML 152
Query: 116 SADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRC 175
A + + +T + L C + G Q+HA ++K+ ++D+Y
Sbjct: 153 KAG--VVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGR---------VLDVY----- 196
Query: 176 YEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYV 235
NA+VA R G+M A F E D V+WN++++G++
Sbjct: 197 ------------------VANALVAMYVRFGKMPEAAVIF-GNLEGKDIVTWNSMLTGFI 237
Query: 236 QNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF 295
QNG E L+ F + ++ ++ + S + A L + KEIH++ +KNG SN
Sbjct: 238 QNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNIL 297
Query: 296 VSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKN 355
V + ++D+Y KC M+Y R FD + K+
Sbjct: 298 VGNTLIDMYAKCCCMSY-------------------------------GGRAFDLMAHKD 326
Query: 356 VVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIH 415
++ WT +GY + + +LL + + EG+ DA ++ +L AC L KEIH
Sbjct: 327 LISWTTAAAGYAQNKCYLQALELLRQ-LQMEGMDVDATMIGSILLACRGLNCLGKIKEIH 385
Query: 416 AYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEE 475
Y +R G+ D L +T++D+Y +CG + YA IF++ +D+V + MI+CY H+G
Sbjct: 386 GYTIRGGLS-DPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLAN 444
Query: 476 KAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACM 535
KA+ +F M E G++PD VT V+ILSA +++ G K + E +
Sbjct: 445 KALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKG-KEIHGFIIRKGFILEGSISNTL 503
Query: 536 IDLYGRANQLEKA 548
+D+Y R +E A
Sbjct: 504 VDMYARCGSVEDA 516
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 9/138 (6%)
Query: 436 MYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVT 495
MY KCG++ AE+IF ER + +N M+ Y +G A+ ++ EM G+ D+ T
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60
Query: 496 FVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID----LYGRANQLEKAIEF 551
F +L A CG VE + + + I D + +++ LY + N + A +
Sbjct: 61 FPVLLKA---CGIVE--DLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKL 115
Query: 552 MKSIPTEEDAVILGSFLN 569
+ D V S ++
Sbjct: 116 FDRMYVRNDVVSWNSIIS 133
>gi|297848206|ref|XP_002891984.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337826|gb|EFH68243.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 611
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 191/621 (30%), Positives = 319/621 (51%), Gaps = 70/621 (11%)
Query: 52 PERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLF 111
P+++ +I + + +++ARSLFD P +D+V + +M+ GY ++ Y + A + F
Sbjct: 41 PKKHHILATNLIVSYFEKGLVEEARSLFDEMPERDVVAWTAMITGYASSN-YNSCAWECF 99
Query: 112 IEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYS 171
EM +EFT++S L C + + +G +H +VK + S + ++L++MY+
Sbjct: 100 HEMFKQGRSP--NEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNALMNMYA 157
Query: 172 KCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLI 231
C ME A F R ++ + V+W TLI
Sbjct: 158 TCSV-------------------------------TMEAAFLIF-RDIKVKNDVTWTTLI 185
Query: 232 SGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI 291
+G+ GD GLK++ +M + A+ A + +V K+IH+ V+K G
Sbjct: 186 TGFTHLGDGIGGLKMYKQMLLENADVTPYCITIAVRASASIDSVTTGKQIHASVVKRGFQ 245
Query: 292 SNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL 351
SN V + I+D YC+C G + EA+R+F +
Sbjct: 246 SNLPVMNSILDFYCRC-------------------------------GYLSEAKRYFHEM 274
Query: 352 TEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG 411
+K+++ W L S ++ + EAL L+ + +G V + L+ ACA AAL+ G
Sbjct: 275 EDKDLITWNTLISELERSDSSEAL--LMFQRFESQGFVPNCYTFTSLVAACANIAALNCG 332
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER-DLVLYNVMIACYAH 470
+++H I R G + +L + L+DMY+KCG++ +E +F ER +LV + M+ Y
Sbjct: 333 QQLHGRIYRRGFNKNVELANALIDMYAKCGDIPDSERVFGEIEERRNLVSWTSMMIGYGS 392
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD 530
HG+ +A+ LF++M+ GI+PD + F+A+LSA RH G VE G KYFN M ++Y I+P+ D
Sbjct: 393 HGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRD 452
Query: 531 HYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGE-AEEKLLR 589
Y C++DL GRA ++ +A E ++ +P + D G+ L C+ +++ L A +K++
Sbjct: 453 IYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHTGLISRLAAKKVME 512
Query: 590 LEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDV 649
L+ YV L+ +YAAEG W E R+RK MR M + AG SW+ VE+++ F V D
Sbjct: 513 LKPRMVGTYVMLSYIYAAEGKWVEFARVRKMMRMMGNKKEAGMSWIEVENQVFSFAVSDK 572
Query: 650 SHPKTNAIYSVLAIFTGELYE 670
P +++YSVL + E E
Sbjct: 573 MCPNASSVYSVLGLLIEETKE 593
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 115/258 (44%), Gaps = 47/258 (18%)
Query: 12 CHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHD 71
C A++A ++ ++TT + IH + + N+ N+I+ +
Sbjct: 215 CITIAVRASASIDSVTTGKQIHA-----------SVVKRGFQSNLPVMNSILDFYCRCGY 263
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
L +A+ F KDL+T+N+++ ++ EA L +F +S + + +T TS
Sbjct: 264 LSEAKRYFHEMEDKDLITWNTLISELERSDSSEA--LLMFQRFES--QGFVPNCYTFTSL 319
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
+ C + + G+QLH + + + + ++LIDMY+KC ++ RVF
Sbjct: 320 VAACANIAALNCGQQLHGRIYRRGFNKNVELANALIDMYAKCGDIPDSERVF-------- 371
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
GE+E E + VSW +++ GY +G E ++LF +M
Sbjct: 372 --------------GEIE----------ERRNLVSWTSMMIGYGSHGYGAEAVELFDKMV 407
Query: 252 ENGVRWNEHTFASALSAC 269
+G+R + F + LSAC
Sbjct: 408 SSGIRPDRIVFMAVLSAC 425
>gi|356557876|ref|XP_003547236.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Glycine max]
Length = 912
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 186/625 (29%), Positives = 318/625 (50%), Gaps = 8/625 (1%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K GL T N LI++Y+K +++++ LFD P N S N ++ K+ L
Sbjct: 292 HSLVLKLGLHSNTFIQNSLINMYAKRGSIKDAQLLFDACPTLNPISCNIMVCGYAKAGQL 351
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
AR LFD P K V+Y +M+ G + E + +AL++F +M+S + + ++ T+ + +
Sbjct: 352 DNARKLFDIMPDKGCVSYTTMIMGLVQNECFR-EALEVFKDMRS--DGVVPNDLTLVNVI 408
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C + R +HA +K + ++L+ Y C EA R+F+ EVNL
Sbjct: 409 YACSHFGEILNCRMIHAIAIKLFVEGLVLVSTNLMRAYCLCSGVGEARRLFDR-MPEVNL 467
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+S N M+ + G ++MA + F R P+ D +SW T+I GY+ E L ++ M
Sbjct: 468 VSWNVMLNGYAKAGLVDMARELFERVPD-KDVISWGTMIDGYILMNRLHEALVMYRAMLR 526
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+G+ NE + +SAC L + ++H V+K G F+ + I+ Y C M+
Sbjct: 527 SGLALNEILVVNLVSACGRLNAIGDGWQLHGMVVKKGFDCYNFIQTTIIHFYAACGMMDL 586
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
A + + S ++++ G+ +++AR+ FD + E++V W+ + SGY +
Sbjct: 587 ACLQFEVGAKDHLESWNALVSGFIKNRMVDQARKIFDDMPERDVFSWSTMISGYAQTDQS 646
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
+L + V G+ + + +V + A A L G+ H YI + ++ L +
Sbjct: 647 RIALELFHKMVA-SGIKPNEVTMVSVFSAIATLGTLKEGRWAHEYICNESIPLNDNLRAA 705
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVL--YNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
L+DMY+KCG++ A F ++ + +N +I A HGH + +F +M IK
Sbjct: 706 LIDMYAKCGSINSALQFFNQIRDKTFSVSPWNAIICGLASHGHASMCLDVFSDMQRYNIK 765
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
P+ +TF+ +LSA H G VE G + F M + Y + P+ HY CM+DL GRA LE+A E
Sbjct: 766 PNPITFIGVLSACCHAGLVEPGRRIFRIMKSAYNVEPDIKHYGCMVDLLGRAGLLEEAEE 825
Query: 551 FMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGN 610
++S+P + D VI G+ L CR + + + A E L L ++ V L+N+YA G
Sbjct: 826 MIRSMPMKADIVIWGTLLAACRTHGDVNIGERAAESLAGLAPSHGGGKVLLSNIYADAGR 885
Query: 611 WAEMGRIRKQMRGMKGNRFAGCSWV 635
W ++ +R+ ++ + R GCS V
Sbjct: 886 WEDVSLVRRAIQNQRMERMPGCSGV 910
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 221/466 (47%), Gaps = 46/466 (9%)
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
E + S L C + GRQLH+ ++K ++ F +SLI+MY+K ++A +F+
Sbjct: 272 ELALVSALKYCS---SSSQGRQLHSLVLKLGLHSNTFIQNSLINMYAKRGSIKDAQLLFD 328
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
C +N IS N MV + G+++ A K F P+ VS+ T+I G VQN E L
Sbjct: 329 ACP-TLNPISCNIMVCGYAKAGQLDNARKLFDIMPD-KGCVSYTTMIMGLVQNECFREAL 386
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLK---NGLISNPFVSSGIV 301
++F M +GV N+ T + + AC + + IH+ +K GL+ VS+ ++
Sbjct: 387 EVFKDMRSDGVVPNDLTLVNVIYACSHFGEILNCRMIHAIAIKLFVEGLV---LVSTNLM 443
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
YC C + A + N S + M+ GY+ G ++ AR F+ + +K+V+ W
Sbjct: 444 RAYCLCSGVGEARRLFDRMPEVNLVSWNVMLNGYAKAGLVDMARELFERVPDKDVISWGT 503
Query: 362 LFSGYVKAQNC-EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
+ GY+ EAL ++ + + G+ + +++V L+ AC A+ G ++H +++
Sbjct: 504 MIDGYILMNRLHEAL--VMYRAMLRSGLALNEILVVNLVSACGRLNAIGDGWQLHGMVVK 561
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEI-------------------------------I 449
G + +T++ Y+ CG M A + I
Sbjct: 562 KGFDCYNFIQTTIIHFYAACGMMDLACLQFEVGAKDHLESWNALVSGFIKNRMVDQARKI 621
Query: 450 FQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSV 509
F + ERD+ ++ MI+ YA A+ LF +M+ GIKP+ VT V++ SA G++
Sbjct: 622 FDDMPERDVFSWSTMISGYAQTDQSRIALELFHKMVASGIKPNEVTMVSVFSAIATLGTL 681
Query: 510 EMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSI 555
+ G ++ + + I + A +ID+Y + + A++F I
Sbjct: 682 KEG-RWAHEYICNESIPLNDNLRAALIDMYAKCGSINSALQFFNQI 726
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 131/266 (49%), Gaps = 5/266 (1%)
Query: 224 AVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHS 283
+ S +T S +VQ+ G+ R+ +N E SAL C +++HS
Sbjct: 238 SFSSSTNASPHVQDPQHFIGIFCNARLHQNHYEC-ELALVSALKYCSSSSQ---GRQLHS 293
Query: 284 WVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEE 343
VLK GL SN F+ + ++++Y K ++ A+ + N S + M+ GY+ G ++
Sbjct: 294 LVLKLGLHSNTFIQNSLINMYAKRGSIKDAQLLFDACPTLNPISCNIMVCGYAKAGQLDN 353
Query: 344 ARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACA 403
AR+ FD + +K V +T + G V+ + ++ + + +GVV + L LV ++ AC+
Sbjct: 354 ARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFKD-MRSDGVVPNDLTLVNVIYACS 412
Query: 404 LQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNV 463
+ + IHA +++ V+ + + L+ Y C + A +F E +LV +NV
Sbjct: 413 HFGEILNCRMIHAIAIKLFVEGLVLVSTNLMRAYCLCSGVGEARRLFDRMPEVNLVSWNV 472
Query: 464 MIACYAHHGHEEKAILLFEEMLEKGI 489
M+ YA G + A LFE + +K +
Sbjct: 473 MLNGYAKAGLVDMARELFERVPDKDV 498
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 122/300 (40%), Gaps = 69/300 (23%)
Query: 6 LKEALICHVQAIKAGLTLTTITT-----------------------------------NQ 30
L EAL+ + +++GL L I
Sbjct: 514 LHEALVMYRAMLRSGLALNEILVVNLVSACGRLNAIGDGWQLHGMVVKKGFDCYNFIQTT 573
Query: 31 LIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTY 90
+IH Y+ ++ + F+ + ++ SWN ++S IK+ + QAR +FD P +D+ ++
Sbjct: 574 IIHFYAACGMMDLACLQFEVGAKDHLESWNALVSGFIKNRMVDQARKIFDDMPERDVFSW 633
Query: 91 NSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAF 150
++M+ GY + AL+LF +M ++ I+ +E T+ S + L + GR H +
Sbjct: 634 STMISGYAQTDQSRI-ALELFHKMVASG--IKPNEVTMVSVFSAIATLGTLKEGRWAHEY 690
Query: 151 MVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEM 210
+ S + ++LIDMY+KC A + F ++
Sbjct: 691 ICNESIPLNDNLRAALIDMYAKCGSINSALQFFN------------------------QI 726
Query: 211 ALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACC 270
KTF P WN +I G +G A L +F M ++ N TF LSACC
Sbjct: 727 RDKTFSVSP-------WNAIICGLASHGHASMCLDVFSDMQRYNIKPNPITFIGVLSACC 779
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 200/654 (30%), Positives = 324/654 (49%), Gaps = 112/654 (17%)
Query: 30 QLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQ--------------- 74
+L+ Y+ L+E R++FD M ++NV+ WN ++S K D K+
Sbjct: 139 KLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEG 198
Query: 75 -----ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVT 129
A LFD +D++++NSM+ GY+ + G L ++ +M I +D T+
Sbjct: 199 KRPESASELFDKLCDRDVISWNSMISGYV-SNGLTERGLGIYKQMMYLG--IDVDLATII 255
Query: 130 STLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEE 189
S L C + G+ +H+ +K+S + ++L+DMYSKC
Sbjct: 256 SVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKC---------------- 299
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
G+++ AL+ F + E N VSW ++I+GY ++G ++ + L +
Sbjct: 300 ----------------GDLDGALRVFEKMGERN-VVSWTSMIAGYTRDGWSDGAIILLQQ 342
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
M + GV+ + S L AC ++ K++H ++ N + SN FV + ++D+Y KC
Sbjct: 343 MEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKC-- 400
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
G+ME A F ++ K+++ W + G +K
Sbjct: 401 -----------------------------GSMEGANSVFSTMVVKDIISWNTMV-GELKP 430
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
D+ + +L ACA +AL GKEIH YILR G D+ +
Sbjct: 431 ---------------------DSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHV 469
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+ LVD+Y KCG + A ++F +DLV + VMIA Y HG+ +AI F EM + GI
Sbjct: 470 ANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGI 529
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
+PD V+F++IL A H G +E G ++F M D+ I P+ +HYACM+DL R L KA
Sbjct: 530 EPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAY 589
Query: 550 EFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEG 609
+F++++P DA I G+ L CR+ + ELA + E++ LE N YV LAN+YA
Sbjct: 590 KFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAE 649
Query: 610 NWAEMGRIRKQMRGMKGNRF-AGCSWVYVEHEIHIFTVG-DVSHPKTNAIYSVL 661
E+ R+R+++ G KG R GCSW+ ++ +++F G + SHP + I S+L
Sbjct: 650 KREEVKRMREKI-GKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLL 702
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 161/346 (46%), Gaps = 28/346 (8%)
Query: 225 VSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSW 284
+N I + Q GD E ++L ++ + T+ S L C GL+++ K++HS
Sbjct: 67 TDYNAKILHFCQLGDLENAMELVCMCQKSELE--TKTYGSVLQLCAGLKSLTDGKKVHSI 124
Query: 285 VLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEE- 343
+ N + + + +V Y C ++ + +N + + M+ Y+ G+ +E
Sbjct: 125 IKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKES 184
Query: 344 -------------------ARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVT 384
A FD L +++V+ W ++ SGYV E + + +
Sbjct: 185 ICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMY 244
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
G+ D ++ +L CA L GK +H+ ++ + +TL+DMYSKCG++
Sbjct: 245 L-GIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLD 303
Query: 445 YAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR 504
A +F+ ER++V + MIA Y G + AI+L ++M ++G+K D V +IL A
Sbjct: 304 GALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACA 363
Query: 505 HCGSVEMGEKYFNSMTADYKISPETDHYAC--MIDLYGRANQLEKA 548
GS++ G+ + + A+ S + + C ++D+Y + +E A
Sbjct: 364 RSGSLDNGKDVHDYIKANNMAS---NLFVCNALMDMYAKCGSMEGA 406
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 195/649 (30%), Positives = 317/649 (48%), Gaps = 99/649 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H IK G + N L+ +Y+K +L ++ +FDE+ + ++ SWN II+ C+
Sbjct: 134 HGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHE-- 191
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
Y AL+L EM + M FT++S L
Sbjct: 192 ------------------------------YHHRALELLREMNKSGMCPNM--FTLSSAL 219
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C + GRQLH+ ++K + F LIDMYSKC ++A VF+
Sbjct: 220 KACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFK-------- 271
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
PE D ++WN +ISG+ QN + EE LF M
Sbjct: 272 ------------------------LMPE-RDMIAWNAVISGHSQNEEDEEAASLFPLMHT 306
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G+ +N+ T ++ L + L+ ++IH+ LK+G + +V + ++D Y KC
Sbjct: 307 EGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKC----- 361
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G++E+A R F+ ++V++T+L + Y +
Sbjct: 362 --------------------------GHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQG 395
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
E L E + G+ D+ + LL ACA +A GK++H +IL+ G D ++
Sbjct: 396 EEALRLYLE-MQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNS 454
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
LV+MY+KCG++ A F R +V ++ MI A HG+ ++A+ LF++ML+ G+ P+
Sbjct: 455 LVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPN 514
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
+T V++L A H G V + YFNSM + I P +HYACMIDL GRA +LE A+E +
Sbjct: 515 HITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELV 574
Query: 553 KSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWA 612
+P + +A++ G+ L R+++N +L +A E LL LE +V LAN+YA+ G W
Sbjct: 575 NKMPFQANALVWGALLGAARIHKNIDLGEQAAEMLLALEPEKSGTHVLLANIYASVGMWD 634
Query: 613 EMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
++ R+R+ M+ K + G SW+ V+ +++ F VGD SH ++ IY+ L
Sbjct: 635 KVARVRRLMKDGKVKKEPGMSWLEVKDKVYTFIVGDRSHSRSTEIYAKL 683
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 136/510 (26%), Positives = 254/510 (49%), Gaps = 79/510 (15%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
+ + F N+++ K ARSLFD+ P + +V++N++ Y++++ + +A+ LF
Sbjct: 42 DSDEFVANSLVILYAKCGGFGDARSLFDAIPDRSVVSWNALFSCYVHSDMH-GEAVSLFH 100
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
+M + IR +EF+++S +N+C L + GR++H +++K D+ F+ ++L+DMY+K
Sbjct: 101 DMVLSG--IRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAK 158
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
E+A VF+ E+A +P D VSWN +I+
Sbjct: 159 VGILEDASSVFD------------------------EIA------KP---DIVSWNAIIA 185
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
G V + L+L M ++G+ N T +SAL AC G+ + +++HS ++K + S
Sbjct: 186 GCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGS 245
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
+ F+ G++D+Y KC +M ++AR F +
Sbjct: 246 DSFLGVGLIDMYSKCNSM-------------------------------DDARLVFKLMP 274
Query: 353 EKNVVVWTALFSGYVKAQNCE---ALFDLLSEFVTKEGVVTDALILVILLGACALQAALH 409
E++++ W A+ SG+ + + E +LF L+ EG+ + L +L + A A +
Sbjct: 275 ERDMIAWNAVISGHSQNEEDEEAASLFPLMH----TEGIGFNQTTLSTVLKSIAALQANY 330
Query: 410 PGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYA 469
++IHA L+ G + D ++++L+D Y KCG++ A +F+ DLVL+ ++ YA
Sbjct: 331 MCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYA 390
Query: 470 HHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPET 529
G E+A+ L+ EM ++GIKPD+ ++L+A C S+ E+ K +
Sbjct: 391 QDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNA---CASLSAYEQGKQVHVHILKFGFMS 447
Query: 530 DHYA--CMIDLYGRANQLEKAIEFMKSIPT 557
D +A ++++Y + +E A IP
Sbjct: 448 DIFAGNSLVNMYAKCGSIEDASCAFSRIPV 477
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 122/479 (25%), Positives = 211/479 (44%), Gaps = 78/479 (16%)
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
I+ +EF S L C ++ G+Q+H +V T D+ F +SL+ +Y+KC + +A
Sbjct: 6 IKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDAR 65
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+F+ + VSWN L S YV +
Sbjct: 66 SLFDAIPDR---------------------------------SVVSWNALFSCYVHSDMH 92
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
E + LF M +G+R NE + +S ++ C GL + ++IH +++K G S+ F ++ +
Sbjct: 93 GEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANAL 152
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
VD+Y K G +E+A FD + + ++V W
Sbjct: 153 VDMYAKV-------------------------------GILEDASSVFDEIAKPDIVSWN 181
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
A+ +G V + +LL E + K G+ + L L ACA A G+++H+ +++
Sbjct: 182 AIIAGCVLHEYHHRALELLRE-MNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIK 240
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
M + D L L+DMYSKC +M A ++F+ ERD++ +N +I+ ++ + +E+A L
Sbjct: 241 MDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASL 300
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC--MIDL 538
F M +GI + T +L + + M + K E D+Y +ID
Sbjct: 301 FPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIH---ALSLKSGFEFDNYVVNSLIDT 357
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKL-LRLEGNNKA 596
YG+ +E A + P D V+ S + + G+ EE L L LE ++
Sbjct: 358 YGKCGHVEDATRVFEESPI-VDLVLFTSLVTAYAQD------GQGEEALRLYLEMQDRG 409
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 145/318 (45%), Gaps = 41/318 (12%)
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA 313
G++ NE F S L AC +++ K++H V+ G S+ FV++ +V +Y KC
Sbjct: 5 GIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKC------ 58
Query: 314 ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE 373
G +AR FD++ +++VV W ALFS YV +
Sbjct: 59 -------------------------GGFGDARSLFDAIPDRSVVSWNALFSCYVHSDMHG 93
Query: 374 ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL 433
L + V G+ + L ++ C G++IH Y++++G D + L
Sbjct: 94 EAVSLFHDMVL-SGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANAL 152
Query: 434 VDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDA 493
VDMY+K G + A +F + D+V +N +IA H + +A+ L EM + G+ P+
Sbjct: 153 VDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNM 212
Query: 494 VTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY--ACMIDLYGRANQLEKAIEF 551
T + L A E+G + +S+ K+ +D + +ID+Y + N ++ A
Sbjct: 213 FTLSSALKACAGMALRELGRQLHSSLI---KMDMGSDSFLGVGLIDMYSKCNSMDDARLV 269
Query: 552 MKSIPTEE----DAVILG 565
K +P + +AVI G
Sbjct: 270 FKLMPERDMIAWNAVISG 287
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 90/189 (47%), Gaps = 9/189 (4%)
Query: 387 GVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYA 446
G+ + +L AC + L GK++H ++ G D+ + ++LV +Y+KCG A
Sbjct: 5 GIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDA 64
Query: 447 EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHC 506
+F +R +V +N + +CY H +A+ LF +M+ GI+P+ + ++++
Sbjct: 65 RSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGL 124
Query: 507 GSVEMGEKYFNSMTADYKISPETDHYA--CMIDLYGRANQLEKAIEFMKSIPTEE----D 560
G K + K+ ++D ++ ++D+Y + LE A I + +
Sbjct: 125 EDSVQGRKIHGYLI---KLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWN 181
Query: 561 AVILGSFLN 569
A+I G L+
Sbjct: 182 AIIAGCVLH 190
>gi|296089801|emb|CBI39620.3| unnamed protein product [Vitis vinifera]
Length = 591
Score = 318 bits (815), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 189/597 (31%), Positives = 299/597 (50%), Gaps = 70/597 (11%)
Query: 75 ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNL 134
A +L S K L+ M+ GY + + A +F EM +E + + FT++S L
Sbjct: 46 ATTLIKSYFGKGLIGEALMIAGYTSCNNH-THAWMVFCEMM--NEELDPNAFTISSVLKA 102
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKC-RCYEEACRVFEGCTEEVNLI 193
C + + +GR +H +K D + ++L+DMY+ C ++AC VF G
Sbjct: 103 CKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDACMVFRGI------- 155
Query: 194 SKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGEN 253
L + VSW TLI+GY D GL++F +M
Sbjct: 156 --------------------------HLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLE 189
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA 313
V N +F+ A+ AC + + +++H+ V K+G SN V + I+D+YC+C
Sbjct: 190 EVELNPFSFSIAVRACTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRC------ 243
Query: 314 ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE 373
+ FS EA R+F + +++++ W L +GY ++ E
Sbjct: 244 ----------SCFS---------------EANRYFYEMNQRDLITWNTLIAGYERSNPTE 278
Query: 374 ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL 433
+L+ + + EG + ++ ACA A L+ G++IH I+R G+ + L + L
Sbjct: 279 SLY--VFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNAL 336
Query: 434 VDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDA 493
+DMYSKCGN+ + +F RDLV + M+ Y HG+ E+A+ LF++M+ GI+PD
Sbjct: 337 IDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDR 396
Query: 494 VTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMK 553
V F+AILSA H G V+ G +YF M DY ISP+ + Y C++DL GRA ++E+A E ++
Sbjct: 397 VVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRAGKVEEAYELIE 456
Query: 554 SIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAE 613
S+P + D + G FL C+ + L A ++L L + YV L+N+YAA+G W E
Sbjct: 457 SMPFKPDECVWGPFLGACKAHTFPNLGKLAAHRILDLRPHMAGTYVMLSNIYAADGKWGE 516
Query: 614 MGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYE 670
R+RK M+ M + G SWV V + ++ F VGD K IY VL G + E
Sbjct: 517 FARLRKLMKRMGNKKETGRSWVEVGNHVYSFVVGDEVGSKIEGIYQVLENLIGHMKE 573
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 37/217 (17%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
E N+ N+I+ + +A F +DL+T+N+++ GY + E+ L +F
Sbjct: 227 ESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAGYERSNPTES--LYVFS 284
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
M+S E + FT TS + C L + G+Q+H +++ D + ++LIDMYSK
Sbjct: 285 MMES--EGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSK 342
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C ++ +VF G + D VSW ++
Sbjct: 343 CGNIADSHQVFGGMSRR---------------------------------DLVSWTAMMI 369
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
GY +G EE ++LF +M +G+R + F + LSAC
Sbjct: 370 GYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAILSAC 406
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 190/591 (32%), Positives = 305/591 (51%), Gaps = 43/591 (7%)
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
L A S+FDS +L+ +N+M G+ + AL L++ M S + + +T
Sbjct: 53 LTYAISVFDSIQEPNLLIWNTMFRGHALSSD-PVSALYLYVCMISLG--LVPNSYTFPFL 109
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L C K G+Q+H ++K D + +SLI MY K E+A +VF+ + +
Sbjct: 110 LKACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHR-D 168
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
++S A++ G + A K F P + D VSWN LISGY + G+ +E L+LF M
Sbjct: 169 VVSYTALIKGYASNGYIXSAQKMFDEIP-VKDVVSWNALISGYAETGNYKEALELFKEMM 227
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
+ V+ +E T + LSAC +++ +++HSW+ +G SN + + ++D+Y KC
Sbjct: 228 KTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKC---- 283
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
G +E A F+ L+ K+V+ W L GY
Sbjct: 284 ---------------------------GEVETASGLFEGLSYKDVISWNTLIGGYTHMNL 316
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM--GVQMDKKL 429
+ L E + + G + + ++ +L ACA A+ G+ IH YI + GV L
Sbjct: 317 YKEALLLFQEML-RSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSL 375
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
++L+DMY+KCG++ A+ +F + + R L +N MI +A HG A +F M + GI
Sbjct: 376 RTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGI 435
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
+PD +TFV +LSA H G +++G F SMT DYKI+P+ +HY CMIDL G + ++A
Sbjct: 436 EPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAE 495
Query: 550 EFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEG 609
E + S+ + D VI S L C+++ N EL + L+++E N YV L+N+YA G
Sbjct: 496 EMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATAG 555
Query: 610 NWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
W E+ + R + +GMK + GCS + ++ +H F +GD HP+ IY
Sbjct: 556 RWNEVAKRRALLNDKGMK--KVPGCSSIEIDSVVHEFIIGDKLHPRNREIY 604
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 156/601 (25%), Positives = 262/601 (43%), Gaps = 131/601 (21%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
+S +E H +K G L LI +Y K+ ++RK+FD+ R+V S+
Sbjct: 115 KSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTA 174
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I + + A+ +FD P KD+V++N+++ GY Y+ +AL+LF EM + +
Sbjct: 175 LIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYK-EALELFKEMMKTN--V 231
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFA-----VSSLIDMYSKCRCY 176
+ DE T+ + L+ C + ++ GRQ+H+++ D GF V++LID+Y KC
Sbjct: 232 KPDESTMVTVLSACAQSASIELGRQVHSWI-----DDHGFGSNLKIVNALIDLYIKCGEV 286
Query: 177 EEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQ 236
E A +FEG + + D +SWNTLI GY
Sbjct: 287 ETASGLFEGLSYK---------------------------------DVISWNTLIGGYTH 313
Query: 237 NGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKN-GLISNP- 294
+E L LF M +G NE T S L AC L + + IH ++ K +SNP
Sbjct: 314 MNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPS 373
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
+ + ++D+Y KC G++E A++ FDS+ +
Sbjct: 374 SLRTSLIDMYAKC-------------------------------GDIEAAQQVFDSMLNR 402
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
++ W A+ G+ FD+ S + K+G+ D + V LL AC+
Sbjct: 403 SLSSWNAMIFGFAMHGRANPAFDIFSR-MRKDGIEPDDITFVGLLSACS----------- 450
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
H+ +L +G + + ++ + Y I L Y MI H G
Sbjct: 451 HSGMLDLG----RHIFRSMTEDYK---------------ITPKLEHYGCMIDLLGHSGLF 491
Query: 475 EKAILLFEEMLEK-GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE-TDHY 532
++A EEM+ + PD V + ++L A + G+VE+GE + ++ KI P+ + Y
Sbjct: 492 KEA----EEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLI---KIEPKNSGSY 544
Query: 533 ACMIDLY---GRANQLEKAIEF-----MKSIP----TEEDAVILGSFLNVCRLNRNAELA 580
+ ++Y GR N++ K MK +P E D+V+ + RN E+
Sbjct: 545 VLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKLHPRNREIY 604
Query: 581 G 581
G
Sbjct: 605 G 605
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 142/321 (44%), Gaps = 66/321 (20%)
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLL 319
H S L C L++++ IH+ ++K GL N NYA S L+
Sbjct: 3 HPSLSLLHNCKTLQSLRI---IHAKMIKTGL-----------------HNTNYALSKLI- 41
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY-VKAQNCEALFDL 378
FS+ S G + A FDS+ E N+++W +F G+ + + AL+
Sbjct: 42 -----EFSVLSP----HFDG-LTYAISVFDSIQEPNLLIWNTMFRGHALSSDPVSALY-- 89
Query: 379 LSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYS 438
L + G+V ++ LL ACA A G++IH ++L++G +D + ++L+ MY
Sbjct: 90 LYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYV 149
Query: 439 KCGNMTYAEIIFQNFIERDLVLY-------------------------------NVMIAC 467
K G A +F RD+V Y N +I+
Sbjct: 150 KNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISG 209
Query: 468 YAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISP 527
YA G+ ++A+ LF+EM++ +KPD T V +LSA S+E+G + +S D+
Sbjct: 210 YAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQ-VHSWIDDHGFGS 268
Query: 528 ETDHYACMIDLYGRANQLEKA 548
+IDLY + ++E A
Sbjct: 269 NLKIVNALIDLYIKCGEVETA 289
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 95/219 (43%), Gaps = 14/219 (6%)
Query: 414 IHAYILRMGVQMDKKLISTLVD---MYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
IHA +++ G+ +S L++ + +TYA +F + E +L+++N M +A
Sbjct: 21 IHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIWNTMFRGHAL 80
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD 530
A+ L+ M+ G+ P++ TF +L A + G++ + K+ + D
Sbjct: 81 SSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHV---LKLGCDLD 137
Query: 531 HY--ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLL 588
Y +I +Y + + E A + + D V S+ + + + A++
Sbjct: 138 LYVHTSLIAMYVKNGRXEDARKVFDQ-SSHRDVV---SYTALIKGYASNGYIXSAQKMFD 193
Query: 589 RLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGN 627
+ + + L + YA GN+ E + K+M MK N
Sbjct: 194 EIPVKDVVSWNALISGYAETGNYKEALELFKEM--MKTN 230
>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 318 bits (814), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 198/609 (32%), Positives = 307/609 (50%), Gaps = 68/609 (11%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
NT+++ K L+ AR LFD+SP DLV++N ++ GY+ G +A LF M SA
Sbjct: 198 NTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQ-NGLMGEAEHLFRGMISAG- 255
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
I+ D T S L +LL++ +++H ++++ + F S+LID+Y KCR
Sbjct: 256 -IKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCR----- 309
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
++EMA K + D V T+ISGYV NG
Sbjct: 310 ---------------------------DVEMAQKILCQSSSF-DTVVCTTMISGYVLNGK 341
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
+E L+ F + + ++ TF+S A GL + KE+H ++K L V S
Sbjct: 342 NKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSA 401
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
I+D+Y KC G ++ A R F+ +TEK+ + W
Sbjct: 402 ILDMYAKC-------------------------------GRLDLACRVFNRITEKDAICW 430
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
++ + + +L + + EG D + + L ACA ALH GKEIH ++
Sbjct: 431 NSMITSCSQNGRPGEAINLFRQ-MGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMI 489
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
+ ++ D S+L+DMY+KCGN+ ++ +F ER+ V +N +I+ Y +HG ++ +
Sbjct: 490 KGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDLKECLA 549
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
LF EML GI+PD VTF+ I+SA H G V+ G +Y++ MT +Y I +HYAC+ D++
Sbjct: 550 LFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMF 609
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYV 599
GRA +L++A E + S+P DA + G+ L C ++ N ELA A + L L+ N YV
Sbjct: 610 GRAGRLDEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNSGYYV 669
Query: 600 QLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYS 659
LANV A G W ++ ++R M+ + G SW+ V + H+F D SHP T IYS
Sbjct: 670 LLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWIEVNNATHMFVAADGSHPLTAQIYS 729
Query: 660 VLAIFTGEL 668
VL EL
Sbjct: 730 VLDSLLLEL 738
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 136/495 (27%), Positives = 232/495 (46%), Gaps = 73/495 (14%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
+ +VF +++I ++ L A+ LFD+ P KD V +N ML GY+ G +A+K+F+
Sbjct: 90 KEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVK-NGDSGNAIKIFL 148
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
EM+ ++ I+ + T L++C + G QLH V + ++L+ MYSK
Sbjct: 149 EMRHSE--IKPNSVTFACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSK 206
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C+C + A ++F+ + +D VSWN +IS
Sbjct: 207 CQCLQAARKLFDTSPQ---------------------------------SDLVSWNGIIS 233
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
GYVQNG E LF M G++ + TFAS L L ++K KEIH +++++ ++
Sbjct: 234 GYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVL 293
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
+ F+ S ++D+Y KC ++ A+ +L ++ ++MI GY L G +EA F L
Sbjct: 294 DVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLV 353
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
++ + + FS + A A AAL+ GK
Sbjct: 354 QERMKPTSVTFSS--------------------------------IFPAFAGLAALNLGK 381
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
E+H I++ + + S ++DMY+KCG + A +F E+D + +N MI + +G
Sbjct: 382 ELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNG 441
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
+AI LF +M +G + D V+ LSA + ++ G++ M K +D Y
Sbjct: 442 RPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMI---KGPLRSDLY 498
Query: 533 A--CMIDLYGRANQL 545
A +ID+Y + L
Sbjct: 499 AESSLIDMYAKCGNL 513
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 131/535 (24%), Positives = 231/535 (43%), Gaps = 80/535 (14%)
Query: 67 IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEF 126
+++ LK A++LF + +N M+ G+ G AL +++M A + D++
Sbjct: 3 VRTGSLKDAKNLFYTLQLGCTSAWNWMIRGF-TMMGQFNYALLFYLKMLGAG--VSPDKY 59
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
T + C L +V G+ +H + F SSLI +Y++
Sbjct: 60 TFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAE-------------- 105
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
G + A F P+ D+V WN +++GYV+NGD+ +K+
Sbjct: 106 ------------------NGHLSDAQYLFDNIPQ-KDSVLWNVMLNGYVKNGDSGNAIKI 146
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
F+ M + ++ N TFA LS C + ++H + GL + V++ ++ +Y K
Sbjct: 147 FLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSK 206
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
C+ ++ AR+ FD+ + ++V W + SGY
Sbjct: 207 CQ-------------------------------CLQAARKLFDTSPQSDLVSWNGIISGY 235
Query: 367 VK---AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
V+ E LF + G+ D++ L +L KEIH YI+R V
Sbjct: 236 VQNGLMGEAEHLF----RGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAV 291
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
+D L S L+D+Y KC ++ A+ I D V+ MI+ Y +G ++A+ F
Sbjct: 292 VLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRW 351
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRAN 543
++++ +KP +VTF +I AF ++ +G++ S+ K+ + + ++D+Y +
Sbjct: 352 LVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKT-KLDEKCHVGSAILDMYAKCG 410
Query: 544 QLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARY 598
+L+ A I TE+DA+ S + C N GEA L R G RY
Sbjct: 411 RLDLACRVFNRI-TEKDAICWNSMITSCSQNGR---PGEA-INLFRQMGMEGTRY 460
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/426 (24%), Positives = 197/426 (46%), Gaps = 50/426 (11%)
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
R G ++ A F+ +L +WN +I G+ G L +++M GV +++TF
Sbjct: 4 RTGSLKDAKNLFYTL-QLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTFP 62
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
+ ACCGL++VK K +H V GL + FV S ++ +Y +
Sbjct: 63 YVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAE----------------- 105
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV 383
G++ +A+ FD++ +K+ V+W + +GYVK + + E
Sbjct: 106 --------------NGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMR 151
Query: 384 TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNM 443
E + +++ +L CA +A L G ++H + G+++D + +TL+ MYSKC +
Sbjct: 152 HSE-IKPNSVTFACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCL 210
Query: 444 TYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS-- 501
A +F + DLV +N +I+ Y +G +A LF M+ GIKPD++TF + L
Sbjct: 211 QAARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCV 270
Query: 502 ----AFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPT 557
+ +HC + G +++ D + + +ID+Y + +E A + + +
Sbjct: 271 NELLSLKHCKEIH-GYIIRHAVVLDVFLK------SALIDIYFKCRDVEMAQKILCQ-SS 322
Query: 558 EEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRI 617
D V+ + ++ LN + A EA L ++ K V ++++ A A + +
Sbjct: 323 SFDTVVCTTMISGYVLNGKNKEALEAFRWL--VQERMKPTSVTFSSIFPAFAGLAAL-NL 379
Query: 618 RKQMRG 623
K++ G
Sbjct: 380 GKELHG 385
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 179/425 (42%), Gaps = 70/425 (16%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
+VF + +I K D++ A+ + S D V +M+ GY+ G +AL+ F +
Sbjct: 294 DVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYV-LNGKNKEALEAFRWL 352
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
E ++ T +S L + G++LH ++KT D S+++DMY+KC
Sbjct: 353 --VQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCG 410
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
+ ACRVF TE+ DA+ WN++I+
Sbjct: 411 RLDLACRVFNRITEK---------------------------------DAICWNSMITSC 437
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
QNG E + LF +MG G R++ + + ALSAC L + KEIH ++K L S+
Sbjct: 438 SQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDL 497
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
+ S ++D+Y KC N+N++ + RN S +S+I Y G+++E
Sbjct: 498 YAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDLKE----------- 546
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG-KE 413
C ALF + + G+ D + + ++ AC + G +
Sbjct: 547 -----------------CLALFHEM----LRNGIQPDHVTFLGIISACGHAGQVDEGIRY 585
Query: 414 IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMIACYAHHG 472
H G+ + + + DM+ + G + A E I D ++ ++ HG
Sbjct: 586 YHLMTEEYGIPARMEHYACVADMFGRAGRLDEAFETINSMPFPPDAGVWGTLLGACHIHG 645
Query: 473 HEEKA 477
+ E A
Sbjct: 646 NVELA 650
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 116/269 (43%), Gaps = 69/269 (25%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
+ +LNL + L H IK L + ++ +Y+K L + ++F+ + E++ WN
Sbjct: 374 LAALNLGKEL--HGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWN 431
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
++I++C + G +A+ LF +M E
Sbjct: 432 SMITSC--------------------------------SQNGRPGEAINLFRQM--GMEG 457
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
R D +++ L+ C L + +G+++H M+K + +A SSLIDMY+KC
Sbjct: 458 TRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKC------- 510
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
G + + + F R E N+ VSWN++IS Y +GD
Sbjct: 511 -------------------------GNLNFSRRVFDRMQERNE-VSWNSIISAYGNHGDL 544
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSAC 269
+E L LF M NG++ + TF +SAC
Sbjct: 545 KECLALFHEMLRNGIQPDHVTFLGIISAC 573
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 120/255 (47%), Gaps = 16/255 (6%)
Query: 335 YSLQGNMEEARRHFDSLTEKNVVVWTALFSGY-VKAQNCEALFDLLSEFVTKEGVVTDAL 393
Y G++++A+ F +L W + G+ + Q AL L + GV D
Sbjct: 2 YVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLK--MLGAGVSPDKY 59
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF 453
++ AC ++ GK +H + MG++ D + S+L+ +Y++ G+++ A+ +F N
Sbjct: 60 TFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNI 119
Query: 454 IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
++D VL+NVM+ Y +G AI +F EM IKP++VTF +LS +++G
Sbjct: 120 PQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGT 179
Query: 514 KYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE----DAVILGSFLN 569
+ + + + ++ ++ +Y + L+ A + + P + + +I G N
Sbjct: 180 Q-LHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQN 238
Query: 570 VCRLNRNAELAGEAE 584
L GEAE
Sbjct: 239 --------GLMGEAE 245
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 45/91 (49%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H IK L + LI +Y+K L SR++FD M ERN SWN+IISA DL
Sbjct: 485 HGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDL 544
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGY 103
K+ +LF + + G I+A G+
Sbjct: 545 KECLALFHEMLRNGIQPDHVTFLGIISACGH 575
>gi|297739912|emb|CBI30094.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 179/501 (35%), Positives = 284/501 (56%), Gaps = 18/501 (3%)
Query: 164 SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELND 223
+++I Y KC EEA R+F+ + N+++ AMV R ++ A K F P N
Sbjct: 102 TTVISGYIKCGMIEEARRLFDRVDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKN- 160
Query: 224 AVSWNTLISGYVQNGDAEEGLKLFVRMGE-NGVRWNEHTFASALSACCGLRNVKCAKEIH 282
VSWNT+I GY QNG + + LF +M E N V WN T S L+ C ++ A+ +
Sbjct: 161 VVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWN--TVMSMLAQCG---RIEEARRLF 215
Query: 283 SWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNME 342
+ + +IS + +G++D E ++ E M R+ S ++MI G G++
Sbjct: 216 DRMPERDVISWTAMIAGLLD-----EALDLFERM----PERDLPSWNTMITGLIQNGDLR 266
Query: 343 EARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGAC 402
AR+ F+ + +KNV+ WT + +G V+ E + S ++ G + V +LGAC
Sbjct: 267 RARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGAC 326
Query: 403 ALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFI--ERDLVL 460
+ A L G+++H I + Q ++S L++MYSKCG + A +F + + +RDLV
Sbjct: 327 SNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVS 386
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
+N +IA YAHHG+ ++AI F+EM + G KPD VT+V +LSA H G VE G KYF+ +
Sbjct: 387 WNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELV 446
Query: 521 ADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELA 580
D I DHYAC++DL GRA +L++A F++ + T+ A + G+ L C ++ N ++
Sbjct: 447 KDRSILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIG 506
Query: 581 GEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHE 640
+A +KLL +E N Y+ L+N+YA+ G W E R+R +M+ + GCSW+ V +
Sbjct: 507 KQAAKKLLEVEPENAGTYLLLSNIYASTGKWREAARVRLKMKDKGLKKQPGCSWIEVGNR 566
Query: 641 IHIFTVGDVSHPKTNAIYSVL 661
+H+F VGD SH ++ IYS+L
Sbjct: 567 VHVFVVGDKSHSQSKLIYSLL 587
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 137/555 (24%), Positives = 239/555 (43%), Gaps = 68/555 (12%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDS-SPHKDL 87
N +I SK + E+R+LFDEM E +V +W T+IS IK +++AR LFD K++
Sbjct: 71 NWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVDAKKNV 130
Query: 88 VTYNSMLCGYINAEGYEADALKLFIEMQSAD---EHIRMDEFTVTSTLNLCVKLLNVGFG 144
VT+ +M+ GYI + +DA KLF EM + + + +D + ++ + L
Sbjct: 131 VTWTAMVGGYIRSNKI-SDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPE 189
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE---------------- 188
R + ++ ++++ M ++C EEA R+F+ E
Sbjct: 190 RNVVSW-------------NTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLLDE 236
Query: 189 ---------EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
E +L S N M+ + G++ A K F P+ N +SW T+I+G VQ G+
Sbjct: 237 ALDLFERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKN-VISWTTMITGCVQEGE 295
Query: 240 AEEGLKLFVRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
+EE LK+F RM NG + N+ TF S L AC L + +++H + K + FV S
Sbjct: 296 SEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVS 355
Query: 299 GIVDVYCKCENMNYAESMLL--LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT---- 352
++++Y KC + A M + R+ S + +I Y+ G +EA F +
Sbjct: 356 ALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGF 415
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
+ + V + L S A E E V ++ L+ C L K
Sbjct: 416 KPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGRL---K 472
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIE---RDLVLYNVMIACYA 469
E +I R+ + ++ L+ + N+ + + +E + Y ++ YA
Sbjct: 473 EAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQAAKKLLEVEPENAGTYLLLSNIYA 532
Query: 470 HHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPET 529
G +A + +M +KG+K C +E+G + + D S
Sbjct: 533 STGKWREAARVRLKMKDKGLKKQP-----------GCSWIEVGNRVHVFVVGDKSHSQSK 581
Query: 530 DHYACMIDLYGRANQ 544
Y+ + DL+ + +
Sbjct: 582 LIYSLLRDLHSKMKK 596
>gi|62733531|gb|AAX95648.1| Tetratricopeptide repeat, putative [Oryza sativa Japonica Group]
Length = 888
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 195/600 (32%), Positives = 322/600 (53%), Gaps = 12/600 (2%)
Query: 44 SRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGY 103
+R+LFD MPER+V S+ T++ A +K ++ A L+ P + + +M+ G++ E
Sbjct: 167 ARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFFTAMIAGFVLNE-L 225
Query: 104 EADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV 163
DAL +F EM S + +E T+ S + C+ + +K++ V
Sbjct: 226 PKDALGVFHEMLSCG--VSPNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDKNLGV 283
Query: 164 -SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN 222
+SLI +Y + + A R+F+ E +++S A++ G++E A + PE N
Sbjct: 284 RNSLITLYLRKGDADAARRMFDE-MEVRDVVSWTALLDVYAELGDLEGARRVLDEMPERN 342
Query: 223 DAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIH 282
+ VSW TL++ + Q G+A+E + L+ +M +G R N F+S L AC L++++ ++IH
Sbjct: 343 E-VSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLGACASLQDLRSGRKIH 401
Query: 283 SWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNME 342
+ LK +N FVSS ++D+YCKC+ + A+ + +N +S+I GYS M
Sbjct: 402 NQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMV 461
Query: 343 EARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF--VTKEGVVTDALILVILLG 400
EA F + +NV W ++ SGY AQN D L F + G + +L
Sbjct: 462 EAEELFKKMPARNVASWNSIISGY--AQN-RQFIDALKSFHAMLASGQSPGEITFSSVLL 518
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL 460
ACA +L GK +HA I+++G++ + + L DMY+K G++ ++ +F +R+ V
Sbjct: 519 ACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDVA 578
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
+ MI A +G E++ILLFE+M+ GI P+ TF+AIL A H G VE YF M
Sbjct: 579 WTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFEMMQ 638
Query: 521 ADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELA 580
A ISP+ HY CM+D+ RA L +A + + I ++ +A + L+ C + RN E+
Sbjct: 639 A-CGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANSWAALLSACNIYRNKEMG 697
Query: 581 GEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHE 640
A ++L L+ +N A YV L+N+YA+ G W + +R M+G+ + GCSWV + E
Sbjct: 698 ERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEMRILMKGINLKKDGGCSWVQIRDE 757
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 200/419 (47%), Gaps = 37/419 (8%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLV 88
N LI +Y + +R++FDEM R+V SW ++ + DL+ AR + D P ++ V
Sbjct: 285 NSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARRVLDEMPERNEV 344
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLH 148
++ +++ + +G +A+ L+ +M + + R + +S L C L ++ GR++H
Sbjct: 345 SWGTLVARH-EQKGNAKEAVSLYSQMLA--DGCRPNISCFSSVLGACASLQDLRSGRKIH 401
Query: 149 AFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEM 208
+K + + F S+LIDMY KC+ +A +F ++ N++ N++++ +M
Sbjct: 402 NQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQK-NIVCWNSLISGYSNNSKM 460
Query: 209 EMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSA 268
A + F + P N A SWN++ISGY QN + LK F M +G E TF+S L A
Sbjct: 461 VEAEELFKKMPARNVA-SWNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLA 519
Query: 269 CCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSI 328
C L +++ K +H+ ++K G+ + FV + + D+Y K
Sbjct: 520 CASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAK---------------------- 557
Query: 329 SSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGV 388
G+++ ++R F + ++N V WTA+ G + E LL E + G+
Sbjct: 558 ---------SGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESI-LLFEDMISAGI 607
Query: 389 VTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAE 447
+ + +L AC+ + + G+ K + +VD+ ++ G++ AE
Sbjct: 608 TPNEQTFLAILFACSHSGLVEHAMHYFEMMQACGISPKAKHYTCMVDVLARAGHLAEAE 666
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 160/350 (45%), Gaps = 37/350 (10%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L+ H Q +K + ++ LI +Y K L +++ +F +P++N+ WN++IS
Sbjct: 393 DLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIVCWNSLIS 452
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
+ + +A LF P +++ ++NS++ GY + DALK F M ++ +
Sbjct: 453 GYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQF-IDALKSFHAMLASGQSP--G 509
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
E T +S L C L ++ G+ +HA ++K S F ++L DMY+K
Sbjct: 510 EITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAK------------ 557
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
G+++ + + F+ P+ ND V+W +I G +NG AEE +
Sbjct: 558 --------------------SGDLDSSKRVFYEMPKRND-VAWTAMIQGLAENGFAEESI 596
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
LF M G+ NE TF + L AC V+ A + G+ + +VDV
Sbjct: 597 LLFEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFEMMQACGISPKAKHYTCMVDVL 656
Query: 305 CKCENMNYAESMLL-LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
+ ++ AE +LL ++ + S ++++ ++ N E R L E
Sbjct: 657 ARAGHLAEAEDLLLKIESKSEANSWAALLSACNIYRNKEMGERAAKRLQE 706
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 145/348 (41%), Gaps = 67/348 (19%)
Query: 321 GVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN--------- 371
G + F+ M+ + G++ ARR FD + E++VV +T + +K +
Sbjct: 144 GAASPFAYDFMVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYR 203
Query: 372 ----CEALF--DLLSEFVTKE---------------GVVTDALILVILLGAC-------- 402
C F +++ FV E GV + + LV ++ AC
Sbjct: 204 QCPLCSVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDL 263
Query: 403 -------ALQA--------------ALHPGKEIHAYILRMGVQMDKKLI---STLVDMYS 438
A+++ L+ K RM +M+ + + + L+D+Y+
Sbjct: 264 AMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYA 323
Query: 439 KCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVA 498
+ G++ A + ER+ V + ++A + G+ ++A+ L+ +ML G +P+ F +
Sbjct: 324 ELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSS 383
Query: 499 ILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE 558
+L A + G K N T S + +ID+Y + QL A S+P +
Sbjct: 384 VLGACASLQDLRSGRKIHNQ-TLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLP-Q 441
Query: 559 EDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYA 606
++ V S ++ + N+++ EAEE ++ N A + + + YA
Sbjct: 442 KNIVCWNSLIS--GYSNNSKMV-EAEELFKKMPARNVASWNSIISGYA 486
>gi|222625627|gb|EEE59759.1| hypothetical protein OsJ_12247 [Oryza sativa Japonica Group]
Length = 950
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 195/600 (32%), Positives = 322/600 (53%), Gaps = 12/600 (2%)
Query: 44 SRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGY 103
+R+LFD MPER+V S+ T++ A +K ++ A L+ P + + +M+ G++ E
Sbjct: 167 ARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFFTAMIAGFVLNE-L 225
Query: 104 EADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV 163
DAL +F EM S + +E T+ S + C+ + +K++ V
Sbjct: 226 PKDALGVFHEMLSCG--VSPNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDKNLGV 283
Query: 164 -SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN 222
+SLI +Y + + A R+F+ E +++S A++ G++E A + PE N
Sbjct: 284 RNSLITLYLRKGDADAARRMFDE-MEVRDVVSWTALLDVYAELGDLEGARRVLDEMPERN 342
Query: 223 DAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIH 282
+ VSW TL++ + Q G+A+E + L+ +M +G R N F+S L AC L++++ ++IH
Sbjct: 343 E-VSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLGACASLQDLRSGRKIH 401
Query: 283 SWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNME 342
+ LK +N FVSS ++D+YCKC+ + A+ + +N +S+I GYS M
Sbjct: 402 NQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMV 461
Query: 343 EARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF--VTKEGVVTDALILVILLG 400
EA F + +NV W ++ SGY AQN D L F + G + +L
Sbjct: 462 EAEELFKKMPARNVASWNSIISGY--AQN-RQFIDALKSFHAMLASGQSPGEITFSSVLL 518
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL 460
ACA +L GK +HA I+++G++ + + L DMY+K G++ ++ +F +R+ V
Sbjct: 519 ACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDVA 578
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
+ MI A +G E++ILLFE+M+ GI P+ TF+AIL A H G VE YF M
Sbjct: 579 WTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFEMMQ 638
Query: 521 ADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELA 580
A ISP+ HY CM+D+ RA L +A + + I ++ +A + L+ C + RN E+
Sbjct: 639 A-CGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANSWAALLSACNIYRNKEMG 697
Query: 581 GEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHE 640
A ++L L+ +N A YV L+N+YA+ G W + +R M+G+ + GCSWV + E
Sbjct: 698 ERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEMRILMKGINLKKDGGCSWVQIRDE 757
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 204/424 (48%), Gaps = 47/424 (11%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLV 88
N LI +Y + +R++FDEM R+V SW ++ + DL+ AR + D P ++ V
Sbjct: 285 NSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARRVLDEMPERNEV 344
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLH 148
++ +++ + +G +A+ L+ +M + + R + +S L C L ++ GR++H
Sbjct: 345 SWGTLVARH-EQKGNAKEAVSLYSQMLA--DGCRPNISCFSSVLGACASLQDLRSGRKIH 401
Query: 149 AFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEM 208
+K + + F S+LIDMY KC+ +A +F ++ N++ N++++ +M
Sbjct: 402 NQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQK-NIVCWNSLISGYSNNSKM 460
Query: 209 EMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSA 268
A + F + P N A SWN++ISGY QN + LK F M +G E TF+S L A
Sbjct: 461 VEAEELFKKMPARNVA-SWNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLA 519
Query: 269 CCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSI 328
C L +++ K +H+ ++K G+ + FV + + D+Y K
Sbjct: 520 CASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAK---------------------- 557
Query: 329 SSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGV 388
G+++ ++R F + ++N V WTA+ G + E LL E + G+
Sbjct: 558 ---------SGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESI-LLFEDMISAGI 607
Query: 389 VTDALILVILLGACALQAALHPGKEIHA--YILRM---GVQMDKKLISTLVDMYSKCGNM 443
+ + +L AC+ H G HA Y M G+ K + +VD+ ++ G++
Sbjct: 608 TPNEQTFLAILFACS-----HSGLVEHAMHYFEMMQACGISPKAKHYTCMVDVLARAGHL 662
Query: 444 TYAE 447
AE
Sbjct: 663 AEAE 666
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 160/350 (45%), Gaps = 37/350 (10%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L+ H Q +K + ++ LI +Y K L +++ +F +P++N+ WN++IS
Sbjct: 393 DLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIVCWNSLIS 452
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
+ + +A LF P +++ ++NS++ GY + DALK F M ++ +
Sbjct: 453 GYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQF-IDALKSFHAMLASGQSP--G 509
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
E T +S L C L ++ G+ +HA ++K S F ++L DMY+K
Sbjct: 510 EITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAK------------ 557
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
G+++ + + F+ P+ ND V+W +I G +NG AEE +
Sbjct: 558 --------------------SGDLDSSKRVFYEMPKRND-VAWTAMIQGLAENGFAEESI 596
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
LF M G+ NE TF + L AC V+ A + G+ + +VDV
Sbjct: 597 LLFEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFEMMQACGISPKAKHYTCMVDVL 656
Query: 305 CKCENMNYAESMLL-LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
+ ++ AE +LL ++ + S ++++ ++ N E R L E
Sbjct: 657 ARAGHLAEAEDLLLKIESKSEANSWAALLSACNIYRNKEMGERAAKRLQE 706
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 139/349 (39%), Gaps = 69/349 (19%)
Query: 321 GVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN--------- 371
G + F+ M+ + G++ ARR FD + E++VV +T + +K +
Sbjct: 144 GAASPFAYDFMVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYR 203
Query: 372 ----CEALF--DLLSEFVTKE---------------GVVTDALILVILLGACALQAALHP 410
C F +++ FV E GV + + LV ++ AC
Sbjct: 204 QCPLCSVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDL 263
Query: 411 GKEIHAYILRMGVQMDKKL---------------------------------ISTLVDMY 437
I ++ + +DK L + L+D+Y
Sbjct: 264 AMSIVGLAMKSNL-LDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVY 322
Query: 438 SKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFV 497
++ G++ A + ER+ V + ++A + G+ ++A+ L+ +ML G +P+ F
Sbjct: 323 AELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFS 382
Query: 498 AILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPT 557
++L A + G K N T S + +ID+Y + QL A S+P
Sbjct: 383 SVLGACASLQDLRSGRKIHNQ-TLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLP- 440
Query: 558 EEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYA 606
+++ V S ++ + N+++ EAEE ++ N A + + + YA
Sbjct: 441 QKNIVCWNSLIS--GYSNNSKMV-EAEELFKKMPARNVASWNSIISGYA 486
>gi|218193589|gb|EEC76016.1| hypothetical protein OsI_13171 [Oryza sativa Indica Group]
Length = 950
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 195/600 (32%), Positives = 322/600 (53%), Gaps = 12/600 (2%)
Query: 44 SRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGY 103
+R+LFD MPER+V S+ T++ A +K ++ A L+ P + + +M+ G++ E
Sbjct: 167 ARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFFTAMIAGFVLNE-L 225
Query: 104 EADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV 163
DAL +F EM S + +E T+ S + C+ + +K++ V
Sbjct: 226 PKDALGVFHEMLSCG--VSPNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDKNLGV 283
Query: 164 -SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN 222
+SLI +Y + + A R+F+ E +++S A++ G++E A + PE N
Sbjct: 284 RNSLITLYLRKGDADAARRMFDE-MEVRDVVSWTALLDVYAELGDLEGARRVLDEMPERN 342
Query: 223 DAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIH 282
+ VSW TL++ + Q G+A+E + L+ +M +G R N F+S L AC L++++ ++IH
Sbjct: 343 E-VSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLGACASLQDLRSGRKIH 401
Query: 283 SWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNME 342
+ LK +N FVSS ++D+YCKC+ + A+ + +N +S+I GYS M
Sbjct: 402 NQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMV 461
Query: 343 EARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF--VTKEGVVTDALILVILLG 400
EA F + +NV W ++ SGY AQN D L F + G + +L
Sbjct: 462 EAEELFKKMPARNVASWNSIISGY--AQN-RQFIDALKSFHAMLASGQSPGEITFSSVLL 518
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL 460
ACA +L GK +HA I+++G++ + + L DMY+K G++ ++ +F +R+ V
Sbjct: 519 ACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDVA 578
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
+ MI A +G E++ILLFE+M+ GI P+ TF+AIL A H G VE YF M
Sbjct: 579 WTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFEMMQ 638
Query: 521 ADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELA 580
A ISP+ HY CM+D+ RA L +A + + I ++ +A + L+ C + RN E+
Sbjct: 639 A-CGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANSWAALLSACNIYRNKEMG 697
Query: 581 GEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHE 640
A ++L L+ +N A YV L+N+YA+ G W + +R M+G+ + GCSWV + E
Sbjct: 698 ERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEMRILMKGINLKKDGGCSWVQIRDE 757
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 204/424 (48%), Gaps = 47/424 (11%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLV 88
N LI +Y + +R++FDEM R+V SW ++ + DL+ AR + D P ++ V
Sbjct: 285 NSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARRVLDEMPERNEV 344
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLH 148
++ +++ + +G +A+ L+ +M + + R + +S L C L ++ GR++H
Sbjct: 345 SWGTLVARH-EQKGNAKEAVSLYSQMLA--DGCRPNISCFSSVLGACASLQDLRSGRKIH 401
Query: 149 AFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEM 208
+K + + F S+LIDMY KC+ +A +F ++ N++ N++++ +M
Sbjct: 402 NQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQK-NIVCWNSLISGYSNNSKM 460
Query: 209 EMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSA 268
A + F + P N A SWN++ISGY QN + LK F M +G E TF+S L A
Sbjct: 461 VEAEELFKKMPARNVA-SWNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLA 519
Query: 269 CCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSI 328
C L +++ K +H+ ++K G+ + FV + + D+Y K
Sbjct: 520 CASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAK---------------------- 557
Query: 329 SSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGV 388
G+++ ++R F + ++N V WTA+ G + E LL E + G+
Sbjct: 558 ---------SGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESI-LLFEDMISAGI 607
Query: 389 VTDALILVILLGACALQAALHPGKEIHA--YILRM---GVQMDKKLISTLVDMYSKCGNM 443
+ + +L AC+ H G HA Y M G+ K + +VD+ ++ G++
Sbjct: 608 TPNEQTFLAILFACS-----HSGLVEHAMHYFEMMQACGISPKAKHYTCMVDVLARAGHL 662
Query: 444 TYAE 447
AE
Sbjct: 663 AEAE 666
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 160/350 (45%), Gaps = 37/350 (10%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L+ H Q +K + ++ LI +Y K L +++ +F +P++N+ WN++IS
Sbjct: 393 DLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIVCWNSLIS 452
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
+ + +A LF P +++ ++NS++ GY + DALK F M ++ +
Sbjct: 453 GYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQF-IDALKSFHAMLASGQS--PG 509
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
E T +S L C L ++ G+ +HA ++K S F ++L DMY+K
Sbjct: 510 EITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAK------------ 557
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
G+++ + + F+ P+ ND V+W +I G +NG AEE +
Sbjct: 558 --------------------SGDLDSSKRVFYEMPKRND-VAWTAMIQGLAENGFAEESI 596
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
LF M G+ NE TF + L AC V+ A + G+ + +VDV
Sbjct: 597 LLFEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFEMMQACGISPKAKHYTCMVDVL 656
Query: 305 CKCENMNYAESMLL-LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
+ ++ AE +LL ++ + S ++++ ++ N E R L E
Sbjct: 657 ARAGHLAEAEDLLLKIESKSEANSWAALLSACNIYRNKEMGERAAKRLQE 706
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 139/349 (39%), Gaps = 69/349 (19%)
Query: 321 GVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN--------- 371
G + F+ M+ + G++ ARR FD + E++VV +T + +K +
Sbjct: 144 GAASPFAYDFMVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYR 203
Query: 372 ----CEALF--DLLSEFVTKE---------------GVVTDALILVILLGACALQAALHP 410
C F +++ FV E GV + + LV ++ AC
Sbjct: 204 QCPLCSVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDL 263
Query: 411 GKEIHAYILRMGVQMDKKL---------------------------------ISTLVDMY 437
I ++ + +DK L + L+D+Y
Sbjct: 264 AMSIVGLAMKSNL-LDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVY 322
Query: 438 SKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFV 497
++ G++ A + ER+ V + ++A + G+ ++A+ L+ +ML G +P+ F
Sbjct: 323 AELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFS 382
Query: 498 AILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPT 557
++L A + G K N T S + +ID+Y + QL A S+P
Sbjct: 383 SVLGACASLQDLRSGRKIHNQ-TLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLP- 440
Query: 558 EEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYA 606
+++ V S ++ + N+++ EAEE ++ N A + + + YA
Sbjct: 441 QKNIVCWNSLIS--GYSNNSKMV-EAEELFKKMPARNVASWNSIISGYA 486
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 200/669 (29%), Positives = 331/669 (49%), Gaps = 53/669 (7%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIH-------IYSKHNLLRESRKLFDEMPERNVF 57
++ +++ H A T T + L + H + + KL D +F
Sbjct: 119 SIGRSIVQHSSPTPASATATNVGDRALFQQCTSFKQLKQIHAQMLRTNKLHDPYAASELF 178
Query: 58 SWNTIISACIKSHD-LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALK---LFIE 113
+ +A S L AR +FD P +L ++N + I A +D ++ +FI
Sbjct: 179 T-----AAAFSSFSALDYARKVFDQIPQPNLYSWNIL----IRALATSSDPIQSVLVFIR 229
Query: 114 MQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKC 173
M D ++FT + + G+ +H +KTS F ++SLI Y+ C
Sbjct: 230 MLH-DSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASC 288
Query: 174 RCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISG 233
+ A VFE +I N D VSWN++++G
Sbjct: 289 GHLDLAYLVFE-------MIEGNN------------------------KDIVSWNSMVTG 317
Query: 234 YVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISN 293
+VQ G ++ L LF RM GV N T S +SAC N+ +++ ++ +N ++ N
Sbjct: 318 FVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMN 377
Query: 294 PFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
V + +D++ KC + A + R+ S +++I GY+ AR FDS+
Sbjct: 378 LNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPR 437
Query: 354 KNVVVWTALFSGYVKAQNCEALFDLLSEF-VTKEGVVTDALILVILLGACALQAALHPGK 412
K++ W L SGY ++ + + E +TK G D + L+ L ACA A+ G+
Sbjct: 438 KDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGE 497
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
IH YI + +Q+++ L ++L+DMYSK G++ A +F + +D+ +++ MIA A HG
Sbjct: 498 WIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHG 557
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
E AI LF +M E +KP++VTF +L A H G V+ G++ F+ M Y + P+T HY
Sbjct: 558 RGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHY 617
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
+CM+D+ GRA LE+A++F++ +P A + G+ L C ++ N ELA +A +LL +E
Sbjct: 618 SCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIEP 677
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
N YV L+N+YA G+W + +R+QMR + GCS + ++ +H F VGD +HP
Sbjct: 678 GNHGAYVLLSNLYAKTGDWEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFIVGDNAHP 737
Query: 653 KTNAIYSVL 661
+ IY+ L
Sbjct: 738 LSRDIYAKL 746
>gi|356551361|ref|XP_003544044.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 688
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 201/652 (30%), Positives = 319/652 (48%), Gaps = 64/652 (9%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +IK+G T +L+ +Y+++ + +FD MP RN
Sbjct: 71 HAHSIKSGFNAHEFVTTKLLQMYARNCSFENACHVFDTMPLRN----------------- 113
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
L ++ ++L YI G+ +A LF ++ +R+D F L
Sbjct: 114 --------------LHSWTALLRVYIEM-GFFEEAFFLFEQLLYEGVRVRLDFFVFPVVL 158
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+C L V GRQ+H +K D + S +M+S+ A
Sbjct: 159 KICCGLCAVELGRQMHGMALKHDGD-----MKSAFEMFSRFSRKSAA------------- 200
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPE---LNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
S NAM+A G + A + F R + D +SWN++ISGYV +E LF
Sbjct: 201 -SYNAMIAGYWENGNLFKAKELFDRMEQEGVQKDRISWNSMISGYVDGSLFDEAYSLFRD 259
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
+ + G+ + T S L+ C + +++ KE HS + GL SN V +V++Y KC++
Sbjct: 260 LLKEGIEPDSFTLGSVLAGCADMASIRRGKEAHSLAIVRGLQSNSIVGGALVEMYSKCQD 319
Query: 310 MNYAESMLLLKGV--RNSFSISSMIVGYSLQGNMEEARRHFDSLT----EKNVVVWTALF 363
+ A+ + GV R+ + +++I GY+ E+ R + E NV W +
Sbjct: 320 IVAAQ--MAFDGVSERDLPTWNALISGYARCNQAEKIRELHQKMRRDGFEPNVYTWNGII 377
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
+GYV+ + ++ L +E + D + I+L AC+ A + GK++HAY +R G
Sbjct: 378 AGYVENKQYDSAMQLFTEMQIAN-LRPDIYTVGIILAACSRLATIQRGKQVHAYSIRAGH 436
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
D + + LVDMY+KCG++ + ++ +LV +N M+ YA HGH E+ I LF
Sbjct: 437 DSDVHIGAALVDMYAKCGDVKHCYRVYNMISNPNLVSHNAMLTAYAMHGHGEEGIALFRR 496
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRAN 543
ML ++PD VTF+A+LS+ H GS+E+G + M A Y + P HY CM+DL RA
Sbjct: 497 MLASKVRPDHVTFLAVLSSCVHAGSLEIGHECLALMVA-YNVMPSLKHYTCMVDLLSRAG 555
Query: 544 QLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLAN 603
QL +A E +K++PTE DAV + L C ++ +L A EKL+ LE NN YV LAN
Sbjct: 556 QLYEAYELIKNLPTEADAVTWNALLGGCFIHNEVDLGEIAAEKLIELEPNNPGNYVMLAN 615
Query: 604 VYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTN 655
+YA+ G W + + R+ M+ M + GCSW+ IH+F D+ H T+
Sbjct: 616 LYASAGKWHYLTQTRQLMKDMGMQKRPGCSWIEDRDGIHVFVAKDIYHTSTS 667
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 135/331 (40%), Gaps = 91/331 (27%)
Query: 261 TFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY---CKCENMNYA---- 313
T+AS L +C + K++H+ +K+G ++ FV++ ++ +Y C EN +
Sbjct: 53 TYASILDSCG---SPILGKQLHAHSIKSGFNAHEFVTTKLLQMYARNCSFENACHVFDTM 109
Query: 314 ---------------------------ESMLLLKGVRNSFS------------------I 328
LL +GVR +
Sbjct: 110 PLRNLHSWTALLRVYIEMGFFEEAFFLFEQLLYEGVRVRLDFFVFPVVLKICCGLCAVEL 169
Query: 329 SSMIVGYSLQ--GNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN---CEALFD------ 377
+ G +L+ G+M+ A F + K+ + A+ +GY + N + LFD
Sbjct: 170 GRQMHGMALKHDGDMKSAFEMFSRFSRKSAASYNAMIAGYWENGNLFKAKELFDRMEQEG 229
Query: 378 ----------LLSEFVT---------------KEGVVTDALILVILLGACALQAALHPGK 412
++S +V KEG+ D+ L +L CA A++ GK
Sbjct: 230 VQKDRISWNSMISGYVDGSLFDEAYSLFRDLLKEGIEPDSFTLGSVLAGCADMASIRRGK 289
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
E H+ + G+Q + + LV+MYSKC ++ A++ F ERDL +N +I+ YA
Sbjct: 290 EAHSLAIVRGLQSNSIVGGALVEMYSKCQDIVAAQMAFDGVSERDLPTWNALISGYARCN 349
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAF 503
EK L ++M G +P+ T+ I++ +
Sbjct: 350 QAEKIRELHQKMRRDGFEPNVYTWNGIIAGY 380
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 201/654 (30%), Positives = 324/654 (49%), Gaps = 68/654 (10%)
Query: 4 LNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
L L E + H +K GL +N LIH Y++ + RKLFD M ERNV
Sbjct: 144 LALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNV------- 196
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
V++ S++ GY + +A+ LF +M A +
Sbjct: 197 ------------------------VSWTSLINGY-SGRDLSKEAVSLFFQMGEAG--VEP 229
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
+ T+ ++ C KL ++ G+++ +++ + + S V++L+DMY KC A ++F
Sbjct: 230 NPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIF 289
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
+ C + + V +NT++S YV + A +
Sbjct: 290 DECANK---------------------------------NLVMYNTIMSNYVHHEWASDV 316
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
L + M + G R ++ T S ++AC L ++ K H++VL+NGL +S+ I+D+
Sbjct: 317 LVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDM 376
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y KC A + + + +S+I G G+ME A R FD + E+++V W +
Sbjct: 377 YMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMI 436
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
V+ E +L E + +G+ D + +V + AC AL K + YI + +
Sbjct: 437 GALVQVSMFEEAIELFRE-MQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDI 495
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
+D +L + LVDM+S+CG+ + A +F+ +RD+ + I A G+ E AI LF E
Sbjct: 496 HVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNE 555
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRAN 543
MLE+ +KPD V FVA+L+A H GSV+ G + F SM + I P HY CM+DL GRA
Sbjct: 556 MLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAG 615
Query: 544 QLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLAN 603
LE+A++ ++S+P E + V+ GS L CR ++N ELA A EKL +L +V L+N
Sbjct: 616 LLEEAVDLIQSMPIEPNDVVWGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSN 675
Query: 604 VYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
+YA+ G W ++ R+R QM+ + G S + V+ IH FT GD SH + I
Sbjct: 676 IYASAGKWTDVARVRLQMKEKGVQKVPGSSSIEVQGLIHEFTSGDESHAENTHI 729
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 167/332 (50%), Gaps = 33/332 (9%)
Query: 227 WNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVL 286
+N LI GY G ++ + L+V+M G+ +++TF LSAC + + ++H VL
Sbjct: 98 YNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVL 157
Query: 287 KNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARR 346
K GL + FVS+ ++ Y +C G ++ R+
Sbjct: 158 KMGLEGDIFVSNSLIHFYAEC-------------------------------GKVDLGRK 186
Query: 347 HFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQA 406
FD + E+NVV WT+L +GY + L + + + GV + + +V ++ ACA
Sbjct: 187 LFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQ-MGEAGVEPNPVTMVCVISACAKLK 245
Query: 407 ALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIA 466
L GK++ +YI +G+++ +++ LVDMY KCG++ A IF ++LV+YN +++
Sbjct: 246 DLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMS 305
Query: 467 CYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKIS 526
Y HH +++ +EML+KG +PD VT ++ ++A G + +G K ++ +
Sbjct: 306 NYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVG-KSSHAYVLRNGLE 364
Query: 527 PETDHYACMIDLYGRANQLEKAIEFMKSIPTE 558
+ +ID+Y + + E A + + +P +
Sbjct: 365 GWDNISNAIIDMYMKCGKREAACKVFEHMPNK 396
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 112/218 (51%), Gaps = 6/218 (2%)
Query: 324 NSFSISSMIVGYSLQGNMEEARRHF--DSLTEKNVVVWTALFSGYVKAQNCEALFDLLSE 381
N SS+ +G +L+ +++ AR F D ++ ++ L GY A + L +
Sbjct: 63 NKLIASSVQIG-TLE-SLDYARNAFGDDDGNMASLFMYNCLIRGYASAGLGDQAILLYVQ 120
Query: 382 FVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
+ G+V D LL AC+ AL G ++H +L+MG++ D + ++L+ Y++CG
Sbjct: 121 MLVM-GIVPDKYTFPFLLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECG 179
Query: 442 NMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
+ +F +ER++V + +I Y+ ++A+ LF +M E G++P+ VT V ++S
Sbjct: 180 KVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVIS 239
Query: 502 AFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
A +E+G+K S ++ + T ++D+Y
Sbjct: 240 ACAKLKDLELGKKVC-SYISELGMELSTIMVNALVDMY 276
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 173/600 (28%), Positives = 314/600 (52%), Gaps = 41/600 (6%)
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
L+ AR +FD P + T+N+++ Y + ++ F++M S++ +++T
Sbjct: 81 LEYARKVFDEIPQPNSFTWNTLIRAYASGPD-PVCSIWAFLDMVSSESQCYPNKYTFPFL 139
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
+ ++ ++ G+ LH +K++ + F +SLI Y C + AC+VF E+
Sbjct: 140 IKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEK-- 197
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
D VSWN++I+G+VQ G ++ L+LF +M
Sbjct: 198 -------------------------------DVVSWNSMINGFVQKGSPDKALELFKKME 226
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
V+ + T LSAC +R+++ + + S++ +N + N +++ ++D+Y KC ++
Sbjct: 227 SEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIE 286
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
A+ + +++ + ++M+ GY++ + E AR +++ +K++V W AL S Y +
Sbjct: 287 DAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGK 346
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
+ E ++ + + + LV L ACA AL G+ IH+YI + G++M+ + S
Sbjct: 347 PNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTS 406
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
L+ MYSKCG++ A +F + +RD+ +++ MI A HG +A+ +F +M E +KP
Sbjct: 407 ALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKP 466
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
+ VTF + A H G V+ E F M + Y I PE HYAC++D+ GR+ LEKA++F
Sbjct: 467 NGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKF 526
Query: 552 MKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNW 611
++++P + G+ L C+++ N LA A +LL LE N +V L+N+YA G W
Sbjct: 527 IEAMPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPRNDGAHVLLSNIYAKSGKW 586
Query: 612 AEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEI 671
+ +RK MR + GCS + ++ IH F GD +HP + +Y G+L+E+
Sbjct: 587 DNVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVY-------GKLHEV 639
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 181/366 (49%), Gaps = 43/366 (11%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTI 62
SL+L ++L H AIK+ + N LIH Y L + K+F + E++V SWN++
Sbjct: 148 SLSLGQSL--HGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSM 205
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
I+ ++ SP K AL+LF +M+S D ++
Sbjct: 206 INGFVQK-----------GSPDK---------------------ALELFKKMESED--VK 231
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
T+ L+ C K+ ++ FGR++ +++ + + + ++++DMY+KC E+A R+
Sbjct: 232 ASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRL 291
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
F+ E+ N ++ M+ + E A + P+ D V+WN LIS Y QNG E
Sbjct: 292 FDAMEEKDN-VTWTTMLDGYAISEDYEAAREVLNAMPK-KDIVAWNALISAYEQNGKPNE 349
Query: 243 GLKLFVRMG-ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
L +F + + ++ N+ T S LSAC + ++ + IHS++ KNG+ N +V+S ++
Sbjct: 350 ALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALI 409
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNV----V 357
+Y KC ++ A + R+ F S+MI G ++ G EA F + E NV V
Sbjct: 410 HMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGV 469
Query: 358 VWTALF 363
+T +F
Sbjct: 470 TFTNVF 475
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 130/269 (48%), Gaps = 37/269 (13%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
+R L + +++ + + LT N ++ +Y+K + ++++LFD M E++ +W
Sbjct: 247 IRDLEFGRRVCSYIEENRVNVNLTL--ANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWT 304
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
T++ S D + AR + ++ P KD+V +N+++ Y G +AL +F E+Q ++
Sbjct: 305 TMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAY-EQNGKPNEALLVFHELQ-LQKN 362
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
I++++ T+ STL+ C ++ + GR +H+++ K + + S+LI MYSKC
Sbjct: 363 IKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKC------- 415
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
G++E A + F E D W+ +I G +G
Sbjct: 416 -------------------------GDLEKAREVF-NSVEKRDVFVWSAMIGGLAMHGCG 449
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSAC 269
E + +F +M E V+ N TF + AC
Sbjct: 450 SEAVDMFYKMQEANVKPNGVTFTNVFCAC 478
>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 785
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 201/611 (32%), Positives = 317/611 (51%), Gaps = 79/611 (12%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N++I+A K +++ AR LFD +D+V++NSM+ G G+ + L+ FI+M +
Sbjct: 197 NSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISG-CTMNGFSRNGLEFFIQMLNLG- 254
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
+ +D T+ + L C + N+ GR LHA+ VK ++L+DMYSKC A
Sbjct: 255 -VDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGA 313
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
VF + GE + VSW ++I+ +V+ G
Sbjct: 314 NEVF-------------------VKMGETTI--------------VSWTSIIAAHVREGL 340
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
E + LF M G+R + + S + AC ++ +E+H+ + KN + SN VS+
Sbjct: 341 HYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNA 400
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
++++Y KC G+MEEA F L KN+V W
Sbjct: 401 LMNMYAKC-------------------------------GSMEEANLIFSQLPVKNIVSW 429
Query: 360 TALFSGYVKAQNC---EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHA 416
+ GY +QN EAL L ++ + D + + +L ACA AAL G+EIH
Sbjct: 430 NTMIGGY--SQNSLPNEALQLFLD---MQKQLKPDDVTMACVLPACAGLAALEKGREIHG 484
Query: 417 YILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
+ILR G D + LVDMY KCG + A+ +F ++D++L+ VMIA Y HG ++
Sbjct: 485 HILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKE 544
Query: 477 AILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMI 536
AI FE+M GI+P+ +F +IL A H G ++ G K F+SM ++ I P+ +HYACM+
Sbjct: 545 AISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYACMV 604
Query: 537 DLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKA 596
DL R+ L +A +F++++P + DA I G+ L+ CR++ + ELA + E + LE N
Sbjct: 605 DLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEHIFELEPENTR 664
Query: 597 RYVQLANVYAAEGNWAEMGRIRKQMR--GMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKT 654
YV LANVYA W E+ +I++++ G+K ++ GCSW+ V+ + +IF GD SHP+
Sbjct: 665 YYVLLANVYAEAEKWEEVKKIQRRISKGGLKNDQ--GCSWIEVQGKFNIFFAGDTSHPQA 722
Query: 655 NAIYSVLAIFT 665
I S+L T
Sbjct: 723 KMIDSLLRKLT 733
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 144/556 (25%), Positives = 238/556 (42%), Gaps = 143/556 (25%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTI 62
+L L AL H +KAG + + N L+ +YSK L + ++F +M E + SW +I
Sbjct: 274 NLTLGRAL--HAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSI 331
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
I+A ++ EG +A+ LF EMQS + +R
Sbjct: 332 IAAHVR--------------------------------EGLHYEAIGLFDEMQS--KGLR 357
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVS-SLIDMYSKCRCYEEACR 181
D + VTS ++ C ++ GR++H +K +N S VS +L++MY+KC
Sbjct: 358 PDIYAVTSVVHACACSNSLDKGREVHNH-IKKNNMGSNLPVSNALMNMYAKC-------- 408
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
G EE NLI + Q + + VSWNT+I GY QN
Sbjct: 409 ---GSMEEANLI----------------------FSQLPVKNIVSWNTMIGGYSQNSLPN 443
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E L+LF+ M + ++ ++ T A L AC GL ++ +EIH +L+ G S+ V+ +V
Sbjct: 444 EALQLFLDM-QKQLKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDLHVACALV 502
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D+Y KC +L+L A++ FD + +K++++WT
Sbjct: 503 DMYVKC-------GLLVL------------------------AQQLFDMIPKKDMILWTV 531
Query: 362 LFSGY-VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
+ +GY + EA+ E + G+ + +L AC H+ +L+
Sbjct: 532 MIAGYGMHGFGKEAISTF--EKMRVAGIEPEESSFTSILYACT-----------HSGLLK 578
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
G ++ M S+C IE L Y M+ G+ +A
Sbjct: 579 EGWKL-------FDSMKSECN------------IEPKLEHYACMVDLLIRSGNLSRAYKF 619
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE-TDHYACMIDLY 539
E M IKPDA + A+LS R VE+ EK + +++ PE T +Y + ++Y
Sbjct: 620 IETM---PIKPDAAIWGALLSGCRIHHDVELAEKVAEHI---FELEPENTRYYVLLANVY 673
Query: 540 GRANQLEKAIEFMKSI 555
A + E+ + + I
Sbjct: 674 AEAEKWEEVKKIQRRI 689
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 171/407 (42%), Gaps = 74/407 (18%)
Query: 222 NDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEI 281
N V N I + + GD +KL R + + N T+ S L C L++++ K +
Sbjct: 22 NVTVDKNAKICKFCEMGDLRNAMKLLSRSQRSELELN--TYCSVLQLCAELKSLEDGKRV 79
Query: 282 HSWVLKNGLISNPFVSSGIVDVYCKCENM-----------------------------NY 312
HS + NG+ + + + +V +Y C ++ NY
Sbjct: 80 HSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKIGNY 139
Query: 313 AESMLLLK-----GVR-NSFSISSMIVGYSLQ---------------------------- 338
ES+ L + G+R +S++ + ++ G++
Sbjct: 140 RESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVVNSL 199
Query: 339 -------GNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTD 391
G +E AR FD L++++VV W ++ SG + + + GV D
Sbjct: 200 IAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNL-GVDVD 258
Query: 392 ALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQ 451
+ LV +L ACA L G+ +HAY ++ G +TL+DMYSKCGN+ A +F
Sbjct: 259 SATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFV 318
Query: 452 NFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEM 511
E +V + +IA + G +AI LF+EM KG++PD +++ A S++
Sbjct: 319 KMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDK 378
Query: 512 GEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE 558
G + N + + + ++++Y + +E+A +P +
Sbjct: 379 GREVHNHIKKN-NMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVK 424
>gi|357128207|ref|XP_003565766.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Brachypodium distachyon]
Length = 734
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 189/609 (31%), Positives = 306/609 (50%), Gaps = 71/609 (11%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
NVF +++ K + A+ +FD PH++ V++ +M+ GY A +A +LF +M
Sbjct: 152 NVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYA-ARKCSQEAFELFRQM 210
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV--SSLIDMYSK 172
+ + +EF T+ L+ L + G Q+H +VK + GF +SL+ MY+K
Sbjct: 211 L-GECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVK--DGMVGFVSVENSLVTMYAK 267
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C + A VFE E ++++W+ +I+
Sbjct: 268 AGCMDAAFHVFESSKER---------------------------------NSITWSAMIT 294
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
GY QNG+AE +++F +M G E T L+AC + + K+ H ++K G
Sbjct: 295 GYSQNGNAESAVRMFSQMHAAGFPPTEFTLVGVLNACSDVGTLMEGKQAHGLMVKLGFEV 354
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
+V S +VD+Y KC G + +A+ F+ +
Sbjct: 355 QVYVKSALVDMYAKC-------------------------------GCIGDAKECFNQFS 383
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
E ++V+WTA+ +G+V+ E L + + KEGV + L + LL ACA AAL PGK
Sbjct: 384 ELDIVLWTAMVTGHVQNGEFEQALMLYAR-MDKEGVFPNTLTITSLLRACAGLAALEPGK 442
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
++H IL+ G + + S L MYSKCGN+ ++F+ RD++ +N +I+ ++ +G
Sbjct: 443 QLHTQILKFGFGLGASVGSALSTMYSKCGNLEDGMVVFRRMPHRDVIAWNSIISGFSQNG 502
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
AI LFEEM +G PD VTF+ +L A H G V+ G YF SM DY ++P DHY
Sbjct: 503 RGNDAINLFEEMKLEGTAPDPVTFINVLCACSHMGLVDRGWTYFRSMIKDYGLTPRLDHY 562
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
ACM+D+ RA L +A +F++SI + + L CR R+ ++ A EKL+ L
Sbjct: 563 ACMVDILSRAGMLSEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGEKLMDLGT 622
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
+ A Y+ L+N+YAA+ W ++ R+R M+ + ++ GCSWV + +H+F VG+ HP
Sbjct: 623 GDSAAYILLSNIYAAQRKWNDVERVRYLMKLVGVSKDPGCSWVELNSRVHVFVVGEQQHP 682
Query: 653 KTNAIYSVL 661
I + L
Sbjct: 683 DAEIINTEL 691
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 108/269 (40%), Gaps = 40/269 (14%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMP----ERNVFSWN 60
N + A+ Q AG T T +++ S L E ++ M E V+ +
Sbjct: 301 NAESAVRMFSQMHAAGFPPTEFTLVGVLNACSDVGTLMEGKQAHGLMVKLGFEVQVYVKS 360
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
++ K + A+ F+ D+V + +M+ G++ +E AL L+ M E
Sbjct: 361 ALVDMYAKCGCIGDAKECFNQFSELDIVLWTAMVTGHVQNGEFE-QALMLYARMDK--EG 417
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
+ + T+TS L C L + G+QLH ++K S+L MYSKC
Sbjct: 418 VFPNTLTITSLLRACAGLAALEPGKQLHTQILKFGFGLGASVGSALSTMYSKC------- 470
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
G +E + F R P D ++WN++ISG+ QNG
Sbjct: 471 -------------------------GNLEDGMVVFRRMPH-RDVIAWNSIISGFSQNGRG 504
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSAC 269
+ + LF M G + TF + L AC
Sbjct: 505 NDAINLFEEMKLEGTAPDPVTFINVLCAC 533
>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
Length = 843
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 188/602 (31%), Positives = 303/602 (50%), Gaps = 115/602 (19%)
Query: 67 IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEF 126
+K ++L A+ LF+S P+ +L +YN+++ GY + D+ + +DE
Sbjct: 321 MKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARS-----------------DKGLGLDEV 363
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
+++ C + G Q+H +K+ ++ ++++DMY KC EAC VFE
Sbjct: 364 SLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFE-- 421
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
++S+ DAVSWN +I+ + QNG+ E+ L L
Sbjct: 422 ----EMVSR---------------------------DAVSWNAIIAAHEQNGNEEKTLSL 450
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
F IH+ ++K+ L + FV ++D+Y K
Sbjct: 451 F---------------------------------IHNRIIKSRLGLDSFVGIALIDMYSK 477
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
C G ME+A + D L E+ VV W A+ SG+
Sbjct: 478 C-------------------------------GMMEKAEKLHDRLAEQTVVSWNAIISGF 506
Query: 367 VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMD 426
+ E S+ + + GV D +L CA + GK+IHA I++ +Q D
Sbjct: 507 SLQKQSEEAQKTFSKML-EMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSD 565
Query: 427 KKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
+ STLVDMYSKCGNM ++IF+ RD V +N M+ YA HG E+A+ +FE M
Sbjct: 566 AYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQL 625
Query: 487 KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLE 546
+ +KP+ TF+A+L A H G VE G YF+SM ++Y + P+ +HY+C++D+ GR+ Q+
Sbjct: 626 ENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVS 685
Query: 547 KAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYA 606
KA+E ++ +P E DAVI + L++C+++ N E+A +A +L+LE + A YV L+N+YA
Sbjct: 686 KALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYA 745
Query: 607 AEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTG 666
G W E+ ++RK MR + GCSW+ ++ E+H F VGD +HP++ IY L + T
Sbjct: 746 NAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTD 805
Query: 667 EL 668
E+
Sbjct: 806 EM 807
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 156/584 (26%), Positives = 268/584 (45%), Gaps = 89/584 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + I T TN LI +Y K + L + K+FD MP+R+ SWN ++ D+
Sbjct: 65 HARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDI 124
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
A+ LFD+ P +D+V++NS++ GY++ G + +F++M D T L
Sbjct: 125 GVAQKLFDAMPERDVVSWNSLISGYLH-NGDHRKVIDVFLQMGRMG--TVFDRTTFAVVL 181
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C L + G G Q+H VK D S+L+DMY+KC+
Sbjct: 182 KSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCK------------------ 223
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+++ +++ F PE N VSW+ +I+G VQN D GL+LF M +
Sbjct: 224 --------------KLDCSIQFFHSMPEKN-WVSWSAIIAGCVQNDDLRGGLELFKEMQK 268
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
GV ++ TFAS +C GL ++ ++H LK ++ + + +D+Y KC N++
Sbjct: 269 AGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSD 328
Query: 313 AESMLLLKGVRNSFSISSMIVGYS----------------------LQGNMEEARRH--- 347
A+ + N S +++IVGY+ ++G++E + H
Sbjct: 329 AQKLFNSLPNHNLQSYNAIIVGYARSDKGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLS 388
Query: 348 FDSLTEKNVVVWTALFSGYVKAQNCEALFD---LLSEFVTKEGVVTDALILVILLGACAL 404
SL + N+ V A+ Y K C AL + + E V+++ V +A+I
Sbjct: 389 MKSLCQSNICVANAILDMYGK---CGALVEACLVFEEMVSRDAVSWNAII---------- 435
Query: 405 QAALHPGKE-------IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD 457
A G E IH I++ + +D + L+DMYSKCG M AE + E+
Sbjct: 436 AAHEQNGNEEKTLSLFIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQT 495
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFN 517
+V +N +I+ ++ E+A F +MLE G+ PD T+ IL + +VE+G++
Sbjct: 496 VVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHA 555
Query: 518 SMTADYKISPETDHY--ACMIDLYGRANQLEKAIEFMKSIPTEE 559
+ K ++D Y + ++D+Y + ++ + P +
Sbjct: 556 QII---KKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRD 596
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 130/504 (25%), Positives = 219/504 (43%), Gaps = 96/504 (19%)
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
G+Q HA M+ T + F + LI MY KC E A +VF+G + + +S NAM+
Sbjct: 61 GKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQR-DTVSWNAMLFGYA 119
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
G++ +A K F PE D VSWN+LISGY+ NGD + + +F++MG G ++ TFA
Sbjct: 120 GRGDIGVAQKLFDAMPE-RDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFA 178
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
L +C L + +IH +K G + S ++D+Y KC+ ++
Sbjct: 179 VVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLD------------ 226
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV 383
S+Q F S+ EKN V W+A+ +G V+ + +L E +
Sbjct: 227 -----------CSIQ--------FFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKE-M 266
Query: 384 TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNM 443
K GV + +CA +AL G ++H + L+ D + + +DMY KC N+
Sbjct: 267 QKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNL 326
Query: 444 TYAEIIFQNFIERDLVLYNVMIACYAH-------------------------------HG 472
+ A+ +F + +L YN +I YA HG
Sbjct: 327 SDAQKLFNSLPNHNLQSYNAIIVGYARSDKGLGLDEVSLSGAFRACAVIKGDLEGLQVHG 386
Query: 473 HEEKAI-------------------------LLFEEMLEKGIKPDAVTFVAILSAFRHCG 507
K++ L+FEEM+ + DAV++ AI++A G
Sbjct: 387 LSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSR----DAVSWNAIIAAHEQNG 442
Query: 508 SVEMGEKYF-NSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGS 566
+ E F ++ ++ ++ +ID+Y + +EKA E + E+ V +
Sbjct: 443 NEEKTLSLFIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKA-EKLHDRLAEQTVVSWNA 501
Query: 567 FLNVCRLNRNAELAGEAEEKLLRL 590
++ L + +E A + K+L +
Sbjct: 502 IISGFSLQKQSEEAQKTFSKMLEM 525
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 150/315 (47%), Gaps = 18/315 (5%)
Query: 261 TFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLK 320
TF+ C + + K+ H+ ++ FV++ ++ +Y KC ++ +A +
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 321 GVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLS 380
R++ S ++M+ GY+ +G++ A++ FD++ E++VV W +L SGY+ + + D+
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163
Query: 381 EFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC 440
+ + + G V D ++L +C+ G +IH ++MG D S L+DMY+KC
Sbjct: 164 Q-MGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKC 222
Query: 441 GNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI- 499
+ + F + E++ V ++ +IA + + LF+EM + G+ TF ++
Sbjct: 223 KKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVF 282
Query: 500 -----LSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKS 554
LSA R GS G D I T +D+Y + N L A + S
Sbjct: 283 RSCAGLSALR-LGSQLHGHALKTDFGTDVVIGTAT------LDMYMKCNNLSDAQKLFNS 335
Query: 555 IPTEE----DAVILG 565
+P +A+I+G
Sbjct: 336 LPNHNLQSYNAIIVG 350
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 109/261 (41%), Gaps = 67/261 (25%)
Query: 9 ALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIK 68
+L H + IK+ L L + LI +YSK ++ ++ KL D + E+ V SWN IIS
Sbjct: 449 SLFIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSL 508
Query: 69 SHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
++A+ T++ ML EM + D FT
Sbjct: 509 QKQSEEAQK-----------TFSKML------------------EMG-----VDPDNFTY 534
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE 188
+ L+ C L+ V G+Q+HA ++K + + S+L+DMYSKC ++ +FE
Sbjct: 535 ATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPN 594
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
+ ++ NAMV GY Q+G EE LK+F
Sbjct: 595 R-DFVTWNAMVC--------------------------------GYAQHGLGEEALKIFE 621
Query: 249 RMGENGVRWNEHTFASALSAC 269
M V+ N TF + L AC
Sbjct: 622 YMQLENVKPNHATFLAVLRAC 642
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 40/228 (17%)
Query: 379 LSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYS 438
+S F + + T + C+ + AL PGK+ HA ++ + + + L+ MY
Sbjct: 29 ISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYI 88
Query: 439 KC-------------------------------GNMTYAEIIFQNFIERDLVLYNVMIAC 467
KC G++ A+ +F ERD+V +N +I+
Sbjct: 89 KCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISG 148
Query: 468 YAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVE--MGEKYFNSMTADYKI 525
Y H+G K I +F +M G D TF +L + C S+E G + +
Sbjct: 149 YLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVL---KSCSSLEDHGGGIQIHGLAVKMGF 205
Query: 526 SPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE----DAVILGSFLN 569
+ + ++D+Y + +L+ +I+F S+P + A+I G N
Sbjct: 206 DCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQN 253
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 195/659 (29%), Positives = 326/659 (49%), Gaps = 103/659 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H Q++K G + N L+++Y+K L+ +++ +F+ M R
Sbjct: 224 HAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETR------------------ 265
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
D+V++N+++ G + E +AL+LF E ++ +M + T + +
Sbjct: 266 -------------DMVSWNTLMAG-LQLNECELEALQLFHESRATMG--KMTQSTYATVI 309
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
LC L + RQLH+ ++K +G +++L D YSKC
Sbjct: 310 KLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKC------------------- 350
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
GE+ AL F + VSW +ISG +QNGD + LF RM E
Sbjct: 351 -------------GELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMRE 397
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+ V NE T+++ L A + +IH+ V+K PFV +
Sbjct: 398 DRVMPNEFTYSAMLKASLSI----LPPQIHAQVIKTNYQHIPFVGT-------------- 439
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
+++ YS G+ E+A F + +K+VV W+A+ S + +A +C
Sbjct: 440 -----------------ALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDC 482
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAA-LHPGKEIHAYILRMGVQMDKKLIS 431
E L ++ +G+ + + ++ ACA +A + G++ HA ++ + S
Sbjct: 483 EGATYLFNKMAI-QGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSS 541
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
LV MYS+ GN+ A+I+F+ +RDLV +N MI+ YA HG+ KAI F +M GI+
Sbjct: 542 ALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQM 601
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
D VTF+A++ H G V G++YF+SM D+KI+P +HYACM+DLY RA +L++ +
Sbjct: 602 DGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSL 661
Query: 552 MKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNW 611
++ +P A++ + L CR+++N EL + +KLL LE ++ + YV L+N+YAA G W
Sbjct: 662 IRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKW 721
Query: 612 AEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYE 670
E +RK M K + AGCSW+ +++++H F D SHP ++ IY L + L +
Sbjct: 722 KERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQ 780
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 110/436 (25%), Positives = 179/436 (41%), Gaps = 73/436 (16%)
Query: 71 DLKQARSLFDSSPHKDL-VTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVT 129
D AR D P +D V N +L Y G + L F + + +D T++
Sbjct: 47 DPPGARYPLDEIPRRDAAVGANRVLFDYAR-RGMVLEVLDQFSVARRGG--VLVDSATLS 103
Query: 130 STLNLCVKLLNVGFGRQLHAFMVKTSNDASGF-AVSSLIDMYSKCRCYEEACRVFEGCTE 188
L C + + G QLH VK +D A +SL+DMY KC E VFEG
Sbjct: 104 CVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEG--- 160
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
P+ N V+W +L++G E + LF
Sbjct: 161 -----------------------------MPKKN-VVTWTSLLTGCAHAQMHSEVMALFF 190
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
RM G+ N TFAS LSA + + +H+ +K G S+ FV + ++++Y KC
Sbjct: 191 RMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKC- 249
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
G +E+A+ F+ + +++V W L +G ++
Sbjct: 250 ------------------------------GLVEDAKSVFNWMETRDMVSWNTLMAG-LQ 278
Query: 369 AQNCE-ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDK 427
CE L E G +T + + + CA L +++H+ +L+ G +
Sbjct: 279 LNECELEALQLFHESRATMGKMTQSTYATV-IKLCANLKQLALARQLHSCVLKHGFHLTG 337
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQNFI-ERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
+++ L D YSKCG + A IF R++V + +I+ +G A++LF M E
Sbjct: 338 NVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMRE 397
Query: 487 KGIKPDAVTFVAILSA 502
+ P+ T+ A+L A
Sbjct: 398 DRVMPNEFTYSAMLKA 413
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 149/364 (40%), Gaps = 36/364 (9%)
Query: 219 PELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCA 278
P + AV N ++ Y + G E L F GV + T + L AC + +
Sbjct: 59 PRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLG 118
Query: 279 KEIHSWVLKNGLISNPFVSSG--IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYS 336
+++H +K G VS+G +VD+Y KC
Sbjct: 119 EQLHCLCVKCGHDRGE-VSAGTSLVDMYMKC----------------------------- 148
Query: 337 LQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILV 396
G++ E F+ + +KNVV WT+L +G AQ + L + EG+ +
Sbjct: 149 --GSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFR-MRAEGIWPNPFTFA 205
Query: 397 ILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER 456
+L A A Q AL G+ +HA ++ G + + ++L++MY+KCG + A+ +F R
Sbjct: 206 SVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETR 265
Query: 457 DLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYF 516
D+V +N ++A + E +A+ LF E K T+ ++ + + + +
Sbjct: 266 DMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQ-L 324
Query: 517 NSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRN 576
+S + + + D Y + +L A+ + V + ++ C N +
Sbjct: 325 HSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGD 384
Query: 577 AELA 580
LA
Sbjct: 385 IPLA 388
>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 195/664 (29%), Positives = 321/664 (48%), Gaps = 100/664 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K GL + + + L+ +Y+K N ++ LF+EMPE++V WNT+IS +S +
Sbjct: 129 HTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNF 188
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
K+A F G + G+E +++ T+T+ +
Sbjct: 189 KEALEYF----------------GLMRRFGFEPNSV------------------TITTAI 214
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C +LL++ G ++H ++ + F S+L+DMY KC
Sbjct: 215 SSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKC------------------- 255
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
G +EMA++ F + P+ V+WN++ISGY GD+ ++LF RM
Sbjct: 256 -------------GHLEMAIEVFEQMPK-KTVVAWNSMISGYGLKGDSISCIQLFKRMYN 301
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
GV+ T +S + C + K +H + ++N + S+ F++S ++D+Y KC
Sbjct: 302 EGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKC----- 356
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G +E A F + + VV W + SGYV
Sbjct: 357 --------------------------GKVELAENIFKLIPKSKVVSWNVMISGYVAEGKL 390
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
L SE + K V DA+ +L AC+ AAL G+EIH I+ + ++ ++
Sbjct: 391 FEALGLFSE-MRKSYVEPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGA 449
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
L+DMY+KCG + A +F+ +RDLV + MI Y HG A+ LF EML+ +KPD
Sbjct: 450 LLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPD 509
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
VTF+AILSA H G V+ G YFN M Y I P +HY+C+IDL GRA +L +A E +
Sbjct: 510 RVTFLAILSACGHAGLVDEGCYYFNQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEAYEIL 569
Query: 553 KSIP-TEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNW 611
+ P +D +L + + CRL+RN +L E L+ + ++ + Y+ L+N+YA+ W
Sbjct: 570 QQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILLSNMYASAHKW 629
Query: 612 AEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEI 671
E+ +R +M+ + + GCSW+ + +I F V D SH ++ L+ + + +
Sbjct: 630 DEVRVVRSKMKELGLKKNPGCSWIEINQKILPFFVEDNSHLHLELVFKCLSYLSDHMEDE 689
Query: 672 AGAF 675
+ F
Sbjct: 690 SKPF 693
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 132/301 (43%), Gaps = 47/301 (15%)
Query: 266 LSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNS 325
L AC +++K K IH V+ GL ++ F+ ++++Y C ++A+ +
Sbjct: 10 LRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVF-------- 61
Query: 326 FSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTK 385
NME + +W L +GY K +L + +
Sbjct: 62 -------------DNMENPCE---------ISLWNGLMAGYTKNYMYVEALELFEKLLHY 99
Query: 386 EGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTY 445
+ D+ +L AC GK IH +++ G+ MD + S+LV MY+KC
Sbjct: 100 PYLKPDSYTYPSVLKACGGLYKYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEK 159
Query: 446 AEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRH 505
A +F E+D+ +N +I+CY G+ ++A+ F M G +P++VT I +A
Sbjct: 160 AIWLFNEMPEKDVACWNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVT---ITTAISS 216
Query: 506 CG-------SVEMGEKYFNS-MTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPT 557
C +E+ E+ NS D IS + ++D+YG+ LE AIE + +P
Sbjct: 217 CARLLDLNRGMEIHEELINSGFLLDSFIS------SALVDMYGKCGHLEMAIEVFEQMPK 270
Query: 558 E 558
+
Sbjct: 271 K 271
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 89/176 (50%), Gaps = 9/176 (5%)
Query: 391 DALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIF 450
D L+ LL AC +L GK IH ++ +G+Q D L L+++Y C +A+ +F
Sbjct: 2 DTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVF 61
Query: 451 QNFIER-DLVLYNVMIACYAHHGHEEKAILLFEEMLEKG-IKPDAVTFVAILSAFRHCGS 508
N ++ L+N ++A Y + +A+ LFE++L +KPD+ T+ ++L A CG
Sbjct: 62 DNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKA---CGG 118
Query: 509 VE---MGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDA 561
+ +G K ++ + + + ++ +Y + N EKAI +P ++ A
Sbjct: 119 LYKYVLG-KMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVA 173
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 209/683 (30%), Positives = 345/683 (50%), Gaps = 62/683 (9%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSW-------------------------- 59
++ N +I Y ++ + E+R+LFD+MP R+++SW
Sbjct: 78 VSWNSMIAAYLHNDRVEEARQLFDKMPTRDLYSWTLMITCYTRNGELAKARNLFNLLPYK 137
Query: 60 ------NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIE 113
N +++ K+ +AR LFD+ P KDLV++NSML GY G L+ F E
Sbjct: 138 WNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTR-NGEMRLGLQFFEE 196
Query: 114 MQSADEHIRMDEFTVTSTLNLCVK-LLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
M D + NL V + VG F K N + V+ L +++
Sbjct: 197 MAERD----------VVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCG-FAR 245
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
EA R+F+ N+++ NAM+AA + ++ A+ F PE N ++SW T+I+
Sbjct: 246 FGKIAEARRLFDQMPIR-NVVAWNAMIAAYVQNCHVDEAISLFMEMPEKN-SISWTTVIN 303
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWV-LKNGLI 291
GYV+ G +E +L +M V + +S + + A++I + + +++ +
Sbjct: 304 GYVRMGKLDEARQLLNQMPYRNVA----AQTAMISGYVQNKRMDDARQIFNQISIRDVVC 359
Query: 292 SNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL 351
N ++ Y +C M+ A + ++ S ++M+ Y+ G M+ A + F+ +
Sbjct: 360 WNTMIAG-----YSQCGRMDEALHLFKQMVKKDIVSWNTMVASYAQVGQMDAAIKIFEEM 414
Query: 352 TEKNVVVWTALFSGYVKAQNCEALFDLLSEFVT--KEGVVTDALILVILLGACALQAALH 409
EKN+V W +L SG QN L D L F+ EG D L +CA AAL
Sbjct: 415 KEKNIVSWNSLISGLT--QNGSYL-DALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQ 471
Query: 410 PGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYA 469
GK++H +++ G D + + L+ MY+KCG+++ AE++F++ D+V +N +IA YA
Sbjct: 472 VGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYA 531
Query: 470 HHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPET 529
+G+ +A+ LF +M +G+ PD VTFV ILSA H G ++ G K F M Y I P
Sbjct: 532 LNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLA 591
Query: 530 DHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLR 589
+HYACM+DL GRA +LE+A + ++ + +A I G+ L CR++ N ELA A EKLL
Sbjct: 592 EHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLELAKFAAEKLLE 651
Query: 590 LEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDV 649
E + + YV L+N+ A G W E+ R+R+ M+ + G SW+ +++ +H F D
Sbjct: 652 FEPHKTSNYVLLSNMQAEAGRWDEVARVRRLMKEKGAEKQPGWSWIELQNRVHAFLSEDP 711
Query: 650 SHPKTNAIYSVLAIFTGELYEIA 672
+HP+ + +L T + A
Sbjct: 712 AHPRAVELCHILRSLTAHMRNTA 734
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 140/549 (25%), Positives = 256/549 (46%), Gaps = 41/549 (7%)
Query: 37 KHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCG 96
K + E+ K+F M +N + N++ISA K+ + AR LFD P +++V++NSM+
Sbjct: 27 KSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAA 86
Query: 97 YINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSN 156
Y++ + E +A +LF +M + D ++ T + + + R L + N
Sbjct: 87 YLHNDRVE-EARQLFDKMPTR------DLYSWTLMITCYTRNGELAKARNLFNLLPYKWN 139
Query: 157 DASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFW 216
++++ Y+K R ++EA R+F+ + +L+S N+M+ R GEM + L+ F
Sbjct: 140 PV---CCNAMVAGYAKNRQFDEARRLFDAMPAK-DLVSWNSMLTGYTRNGEMRLGLQFFE 195
Query: 217 RQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM-GENGVRWNEHTFASALSACCGLRNV 275
E D VSWN ++ G+V+ GD + F ++ N V W ++ CG
Sbjct: 196 EMAE-RDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSW--------VTMLCGFARF 246
Query: 276 KCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGY 335
E + I N + ++ Y + +++ A S+ + +NS S +++I GY
Sbjct: 247 GKIAEARR-LFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGY 305
Query: 336 SLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALIL 395
G ++EAR+ + + +NV TA+ SGYV+ + + + ++ ++ V + +I
Sbjct: 306 VRMGKLDEARQLLNQMPYRNVAAQTAMISGYVQNKRMDDARQIFNQISIRDVVCWNTMIA 365
Query: 396 VILLGACA-LQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFI 454
C + ALH K++ V+ D +T+V Y++ G M A IF+
Sbjct: 366 G--YSQCGRMDEALHLFKQM--------VKKDIVSWNTMVASYAQVGQMDAAIKIFEEMK 415
Query: 455 ERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
E+++V +N +I+ +G A+ F M +G KPD TF LS+ H ++++G++
Sbjct: 416 EKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQ 475
Query: 515 YFN-SMTADYKISPETDHYA--CMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVC 571
M + Y TD + +I +Y + + A K I D V S +
Sbjct: 476 LHQLVMKSGYA----TDLFVSNALITMYAKCGSISSAELLFKDI-DHFDVVSWNSLIAAY 530
Query: 572 RLNRNAELA 580
LN N A
Sbjct: 531 ALNGNGREA 539
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 112/498 (22%), Positives = 213/498 (42%), Gaps = 119/498 (23%)
Query: 12 CHV-QAIKAGLTLT---TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACI 67
CHV +AI + + +I+ +I+ Y + L E+R+L ++MP RNV + +IS +
Sbjct: 278 CHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQTAMISGYV 337
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFT 127
++ + AR +F+ +D+V +N+M+ GY + RMDE
Sbjct: 338 QNKRMDDARQIFNQISIRDVVCWNTMIAGY--------------------SQCGRMDE-- 375
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
LH F D + ++++ Y++ + A ++FE
Sbjct: 376 ------------------ALHLFKQMVKKDIVSW--NTMVASYAQVGQMDAAIKIFEEMK 415
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
E+ N++S N+++ SG QNG + LK F
Sbjct: 416 EK-NIVSWNSLI--------------------------------SGLTQNGSYLDALKSF 442
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
+ MG G + ++ TFA LS+C L ++ K++H V+K+G ++ FVS+ ++ +Y KC
Sbjct: 443 MLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKC 502
Query: 308 ENMNYAESMLLLKGVR--NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
+++ AE LL K + + S +S+I Y+L GN EA + F +
Sbjct: 503 GSISSAE--LLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKM-------------- 546
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM-GVQ 424
EGV D + V +L AC+ + G ++ +++ ++
Sbjct: 547 ------------------EVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIE 588
Query: 425 MDKKLISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
+ + +VD+ + G + A +++ I + ++ ++ HG+ E A E+
Sbjct: 589 PLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLELAKFAAEK 648
Query: 484 MLEKGIKPDAVTFVAILS 501
+LE +P + +LS
Sbjct: 649 LLE--FEPHKTSNYVLLS 664
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 13/131 (9%)
Query: 434 VDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDA 493
+ K G + A +FQ+ ++ V +N MI+ +A +G A LF+ M ++ I
Sbjct: 22 ITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNI---- 77
Query: 494 VTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA--CMIDLYGRANQLEKAIEF 551
V++ ++++A+ H VE + F+ M P D Y+ MI Y R +L KA
Sbjct: 78 VSWNSMIAAYLHNDRVEEARQLFDKM-------PTRDLYSWTLMITCYTRNGELAKARNL 130
Query: 552 MKSIPTEEDAV 562
+P + + V
Sbjct: 131 FNLLPYKWNPV 141
>gi|359497788|ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 580
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 190/551 (34%), Positives = 305/551 (55%), Gaps = 15/551 (2%)
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE 188
+S ++ C+ ++ G+ LH+ +KT+ + F + LID YSKC + A +VF
Sbjct: 18 SSLISKCITTRHLKLGKLLHSHFIKTALIFTTFLANRLIDFYSKCDSIQSAHKVFHVLPV 77
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
+ N S N +++A R G A + P+ N VS+N+LISG +G +E L +F
Sbjct: 78 K-NTHSWNIIISAYSRSGLFNEAHNLLDQMPKPN-LVSYNSLISGLGHHGFRKESLNVFK 135
Query: 249 RMGE--NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
M + + V ++E T S + +C L + +++H + GL SN + + ++D Y K
Sbjct: 136 TMLKQCSNVLFDEFTLVSLVGSCASLGAPELLRQVHGAAIIIGLNSNIIIGNALIDAYGK 195
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
C + + S+ R+ S +SM+ Y+ +E+A F + EKN V WTAL +G+
Sbjct: 196 CGEPDISFSIFSRMPERDVVSWTSMVAAYAQASRLEDAHWLFSQMQEKNTVSWTALIAGF 255
Query: 367 VK-AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR---MG 422
+ + EAL L E + +EG+ A +L ACA A + GKEIH +I+R +
Sbjct: 256 AQNGRGDEALH--LFEQMREEGIPPSAFTFASVLSACADLALIARGKEIHGHIIRSTCID 313
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
+ +++ L+DMY KCG M A +F+ E+D+V +N +I +A +GH E+++ +FE
Sbjct: 314 YFCNIFILNALIDMYCKCGQMRSATTLFKGMHEKDIVSWNSLITGFAQNGHGEESLAVFE 373
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRA 542
M+E I+P+ VTF+ +LSA H G V G + +SM DY + P +DHYA MIDL GR
Sbjct: 374 RMIEADIRPNHVTFLGLLSACCHTGLVSEGLRILDSMEKDYGVCPRSDHYAIMIDLLGRN 433
Query: 543 NQLEKAIEFMKSIPTEEDAV-ILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQL 601
N+LE+A+ +K P D V + G+ L CR++ N +LA A E L +LE N ARYV +
Sbjct: 434 NRLEEAMGLIKRAPKGSDHVGMWGALLGACRIHGNMDLARRAAEVLFQLEPGNAARYVMV 493
Query: 602 ANVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYS 659
N+YAA W E ++R+ M RG++ + A CSW+ V + H F + SH + N +Y
Sbjct: 494 YNIYAAASRWDEARQVRRLMMERGLR--KEAACSWIEVRNTRHQFVAKERSHCQINEVYE 551
Query: 660 VLAIFTGELYE 670
V+ ++Y+
Sbjct: 552 VIHNLVDQMYD 562
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/370 (32%), Positives = 196/370 (52%), Gaps = 10/370 (2%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+LK + H IK L TT N+LI YSK + ++ + K+F +P +N SWN IIS
Sbjct: 29 HLKLGKLLHSHFIKTALIFTTFLANRLIDFYSKCDSIQSAHKVFHVLPVKNTHSWNIIIS 88
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
A +S +A +L D P +LV+YNS++ G + G+ ++L +F M ++ D
Sbjct: 89 AYSRSGLFNEAHNLLDQMPKPNLVSYNSLISG-LGHHGFRKESLNVFKTMLKQCSNVLFD 147
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
EFT+ S + C L RQ+H + +++ ++LID Y KC + + +F
Sbjct: 148 EFTLVSLVGSCASLGAPELLRQVHGAAIIIGLNSNIIIGNALIDAYGKCGEPDISFSIFS 207
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
E +++S +MVAA + +E A F + E N VSW LI+G+ QNG +E L
Sbjct: 208 RMPER-DVVSWTSMVAAYAQASRLEDAHWLFSQMQEKN-TVSWTALIAGFAQNGRGDEAL 265
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS---NPFVSSGIV 301
LF +M E G+ + TFAS LSAC L + KEIH ++++ I N F+ + ++
Sbjct: 266 HLFEQMREEGIPPSAFTFASVLSACADLALIARGKEIHGHIIRSTCIDYFCNIFILNALI 325
Query: 302 DVYCKCENMNYAESMLLLKGV--RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
D+YCKC M A + L KG+ ++ S +S+I G++ G+ EE+ F+ + E ++
Sbjct: 326 DMYCKCGQMRSATT--LFKGMHEKDIVSWNSLITGFAQNGHGEESLAVFERMIEADIRPN 383
Query: 360 TALFSGYVKA 369
F G + A
Sbjct: 384 HVTFLGLLSA 393
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 172/385 (44%), Gaps = 47/385 (12%)
Query: 262 FASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKG 321
++S +S C R++K K +HS +K LI F+++ ++D Y KC+++ A + +
Sbjct: 17 YSSLISKCITTRHLKLGKLLHSHFIKTALIFTTFLANRLIDFYSKCDSIQSAHKVFHVLP 76
Query: 322 VRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSE 381
V+N+ S + +I YS G EA D + + N+V + +L SG + ++
Sbjct: 77 VKNTHSWNIIISAYSRSGLFNEAHNLLDQMPKPNLVSYNSLISGLGHHGFRKESLNVFKT 136
Query: 382 FVTK-EGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC 440
+ + V+ D LV L+G+CA A +++H + +G+ + + + L+D Y KC
Sbjct: 137 MLKQCSNVLFDEFTLVSLVGSCASLGAPELLRQVHGAAIIIGLNSNIIIGNALIDAYGKC 196
Query: 441 GNMTYAEIIFQNFIERDLVLYNVMIACY-------------------------------A 469
G + IF ERD+V + M+A Y A
Sbjct: 197 GEPDISFSIFSRMPERDVVSWTSMVAAYAQASRLEDAHWLFSQMQEKNTVSWTALIAGFA 256
Query: 470 HHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPET 529
+G ++A+ LFE+M E+GI P A TF ++LSA + G++ + I
Sbjct: 257 QNGRGDEALHLFEQMREEGIPPSAFTFASVLSACADLALIARGKEIHGHIIRSTCID--- 313
Query: 530 DHYAC-------MIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGE 582
Y C +ID+Y + Q+ A K + E+D V S + N + E +
Sbjct: 314 --YFCNIFILNALIDMYCKCGQMRSATTLFKGM-HEKDIVSWNSLITGFAQNGHGEESLA 370
Query: 583 AEEKLLRLEGNNKARYVQLANVYAA 607
E++ +E + + +V + +A
Sbjct: 371 VFERM--IEADIRPNHVTFLGLLSA 393
>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 752
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 197/658 (29%), Positives = 321/658 (48%), Gaps = 99/658 (15%)
Query: 11 ICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSH 70
+ H ++K+GL + ++ LI +Y K + + ++F +M +RNV SW II
Sbjct: 178 LLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKRNVVSWTAII------- 230
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
G ++A GY +AL F EM + + D T
Sbjct: 231 ------------------------AGLVHA-GYNMEALLYFSEMWISK--VGYDSHTFAI 263
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L + G+ +H +K D S F +++L MY+KC + R+FE
Sbjct: 264 ALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFE------ 317
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
+M+M D VSW TLI+ YVQ G+ E ++ F RM
Sbjct: 318 ----------------KMKMP-----------DVVSWTTLITTYVQKGEEEHAVEAFKRM 350
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
++ V N++TFA+ +SAC L K ++IH VL+ GL+ V++ IV +Y K
Sbjct: 351 RKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSK---- 406
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
G ++ A F +T K+++ W+ + + Y +
Sbjct: 407 ---------------------------SGLLKSASLVFHGITRKDIISWSTIIAVYSQGG 439
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
+ FD LS ++ +EG + L +L C A L GK++HA++L +G+ + +
Sbjct: 440 YAKEAFDYLS-WMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVH 498
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
S L+ MYSKCG++ A IF +++ + MI YA HG+ ++AI LFE++ G+K
Sbjct: 499 SALISMYSKCGSVEEASKIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGLK 558
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
PD VTF+ +L+A H G V++G YF MT +Y+ISP +HY C+IDL RA +L +A
Sbjct: 559 PDYVTFIGVLTACSHAGMVDLGFYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEH 618
Query: 551 FMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGN 610
++S+P D V+ + L CR++ + + E+LLRL+ N+ ++ LAN+YAA+G
Sbjct: 619 MIRSMPCYTDDVVWSTLLRSCRVHGDVDRGRWTAEQLLRLDPNSAGTHIALANIYAAKGR 678
Query: 611 WAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
W E IRK M+ + G SWV V +++ F GD +HP++ I +VL + + +
Sbjct: 679 WKEAAHIRKLMKSKGVIKERGWSWVNVNDKLNAFVAGDQAHPQSEHITTVLELLSANI 736
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 141/556 (25%), Positives = 231/556 (41%), Gaps = 112/556 (20%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINA-EGYEADALKLFIE 113
N+ N+ + +K L ++R +FD H+D +++ +++ GY+NA + YEA L LF
Sbjct: 89 NMLELNSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEA--LILFSN 146
Query: 114 MQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKC 173
M ++ D+F ++ L C +N+ FG LH F VK+ S F S+LIDMY K
Sbjct: 147 MW-VQPGLQRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKV 205
Query: 174 RCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISG 233
E+ CRVF+ T+ + VSW +I+G
Sbjct: 206 GKIEQGCRVFKKMTKR---------------------------------NVVSWTAIIAG 232
Query: 234 YVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISN 293
V G E L F M + V ++ HTFA AL A + K IH+ +K G +
Sbjct: 233 LVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDES 292
Query: 294 PFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
FV + + +Y KC +Y R F+ +
Sbjct: 293 SFVINTLATMYNKCGKADY-------------------------------VMRLFEKMKM 321
Query: 354 KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
+VV WT L + YV+ E + + K V + ++ ACA A G++
Sbjct: 322 PDVVSWTTLITTYVQKGEEEHAVEAFKR-MRKSNVSPNKYTFAAVISACANLAIAKWGEQ 380
Query: 414 IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH 473
IH ++LR+G+ + +++V +YSK G + A ++F +D++ ++ +IA Y+ G+
Sbjct: 381 IHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGY 440
Query: 474 EEKAILLFEEMLEKGIKP-----------------------------------DAVTFVA 498
++A M +G KP +A+ A
Sbjct: 441 AKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSA 500
Query: 499 ILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI---EFMKSI 555
++S + CGSVE K FN M + IS + MI+ Y ++AI E + S+
Sbjct: 501 LISMYSKCGSVEEASKIFNGMKINNIIS-----WTAMINGYAEHGYSQEAINLFEKISSV 555
Query: 556 PTEEDAVILGSFLNVC 571
+ D V L C
Sbjct: 556 GLKPDYVTFIGVLTAC 571
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 90/181 (49%)
Query: 322 VRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSE 381
V N ++S + QG + ++R FD +T ++ + WT L +GYV A + L S
Sbjct: 87 VHNMLELNSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSN 146
Query: 382 FVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
+ G+ D ++ + L AC L + G+ +H + ++ G+ + S L+DMY K G
Sbjct: 147 MWVQPGLQRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVG 206
Query: 442 NMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
+ +F+ +R++V + +IA H G+ +A+L F EM + D+ TF L
Sbjct: 207 KIEQGCRVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALK 266
Query: 502 A 502
A
Sbjct: 267 A 267
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 220/727 (30%), Positives = 346/727 (47%), Gaps = 134/727 (18%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTI 62
SL+ K H Q +K GL L+ +Y K + + R++FDEM ERNV SW ++
Sbjct: 106 SLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSL 165
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
++ ++N L GY+ +LF +MQ E +
Sbjct: 166 LAG----------------------YSWNG-LYGYV---------WELFCQMQY--EGVL 191
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
+ +TV++ + V VG G Q+HA +VK + + +SLI +YS+ +A V
Sbjct: 192 PNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDV 251
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
F+ + E+ D V+WN++I+GYV+NG E
Sbjct: 252 FD---------------------------------KMEIRDWVTWNSMIAGYVRNGQDLE 278
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
++F +M GV+ TFAS + +C LR + K + LK+G ++ V + ++
Sbjct: 279 VFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMV 338
Query: 303 VYCKCENMNYAESML-LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT--------- 352
KC+ M+ A S+ L++ +N S ++MI G G ++A F +
Sbjct: 339 ALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHF 398
Query: 353 --------------------------EKNVVVWTALFSGYVK---------------AQN 371
E++ V TAL YVK A++
Sbjct: 399 TYSAILTVHYPVFVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKD 458
Query: 372 CEALFDLLSEF---------------VTKEGVVTDALILVILLGACA-LQAALHPGKEIH 415
A +L+ + + KEG+ + ++ ACA AA GK+ H
Sbjct: 459 LMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFH 518
Query: 416 AYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEE 475
AY ++M + + S LV MY+K GN+ A +F+ ERDLV +N MI+ Y+ HG +
Sbjct: 519 AYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAK 578
Query: 476 KAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACM 535
KA+ +F+EM ++ + DAVTF+ +++A H G VE G+KYFNSM D+ I+P HY+CM
Sbjct: 579 KALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCM 638
Query: 536 IDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNK 595
IDLY RA LEKA+ + +P A + + L R++RN EL A EKL+ L+ +
Sbjct: 639 IDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDS 698
Query: 596 ARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTN 655
A YV L+N+YAA GNW E +RK M K + G SW+ V+++ + F GD++HP +N
Sbjct: 699 AAYVLLSNMYAAAGNWQERTNVRKLMDKRKVKKEPGYSWIEVKNKTYSFLAGDLTHPLSN 758
Query: 656 AIYSVLA 662
IYS L+
Sbjct: 759 QIYSKLS 765
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 190/430 (44%), Gaps = 71/430 (16%)
Query: 75 ARSLFDSSPHKD--LVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
A +LFD PH+ L +N +L Y + + +AL LF+ + + ++ DE T++
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSY-SRDKQTKEALNLFVSLLHSS--LQPDESTLSCVF 100
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
N+C L+ GRQ+H VK +SL+DMY K + RVF+ E
Sbjct: 101 NICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGER--- 157
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+ VSW +L++GY NG +LF +M
Sbjct: 158 ------------------------------NVVSWTSLLAGYSWNGLYGYVWELFCQMQY 187
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
GV N +T ++ ++A V ++H+ V+K+G +
Sbjct: 188 EGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHG----------------------F 225
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
E++ + +S+I YS G + +AR FD + ++ V W ++ +GYV+
Sbjct: 226 EEAIPVF---------NSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQD 276
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
+F++ ++ + GV + ++ +CA L K + L+ G D+ +I+
Sbjct: 277 LEVFEIFNK-MQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITA 335
Query: 433 LVDMYSKCGNMTYAEIIFQNFIE-RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
L+ SKC M A +F E +++V + MI+ +G ++A+ LF +M +G+KP
Sbjct: 336 LMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKP 395
Query: 492 DAVTFVAILS 501
+ T+ AIL+
Sbjct: 396 NHFTYSAILT 405
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 134/282 (47%), Gaps = 35/282 (12%)
Query: 228 NTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLK 287
N L+ Y ++ +E L LFV + + ++ +E T + + C G + K +++H +K
Sbjct: 62 NQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVK 121
Query: 288 NGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRH 347
GL+ + V + +VD+Y K EN+N + G RN S +S++ GYS
Sbjct: 122 FGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYS----------- 170
Query: 348 FDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAA 407
W L+ GYV C+ + EGV+ + + ++ A +
Sbjct: 171 -----------WNGLY-GYVWELFCQMQY---------EGVLPNRYTVSTVIAALVNEGV 209
Query: 408 LHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIAC 467
+ G ++HA +++ G + + ++L+ +YS+ G + A +F RD V +N MIA
Sbjct: 210 VGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAG 269
Query: 468 YAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSV 509
Y +G + + +F +M G+KP +TF +++ + C S+
Sbjct: 270 YVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVI---KSCASL 308
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 83/187 (44%), Gaps = 3/187 (1%)
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
LFS Q EAL +S + + D L + CA G+++H ++
Sbjct: 65 LFSYSRDKQTKEALNLFVS--LLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVKF 122
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
G+ + ++LVDMY K N+ +F ER++V + ++A Y+ +G LF
Sbjct: 123 GLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELF 182
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGR 541
+M +G+ P+ T +++A + G V +G + ++M + + +I LY R
Sbjct: 183 CQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQ-VHAMVVKHGFEEAIPVFNSLISLYSR 241
Query: 542 ANQLEKA 548
L A
Sbjct: 242 LGMLRDA 248
>gi|356560286|ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Glycine max]
Length = 911
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 206/703 (29%), Positives = 350/703 (49%), Gaps = 80/703 (11%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K G + + LI++Y K+ + + ++FDE P + F WNTI+ A ++S
Sbjct: 154 HACLVKRGFHVDVHLSCALINLYEKYLGIDGANQVFDETPLQEDFLWNTIVMANLRS--- 210
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
E +E DAL+LF MQSA + + T+ L
Sbjct: 211 ----------------------------EKWE-DALELFRRMQSASA--KATDGTIVKLL 239
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C KL + G+Q+H ++++ ++ +S++ MYS+ E A RV TE+ N
Sbjct: 240 QACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELA-RVAFDSTEDHNS 298
Query: 193 ISKNAMVAAC----CREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
S N+++++ C G ++ L+ D ++WN+L+SG++ G E L F
Sbjct: 299 ASWNSIISSYAVNDCLNGAWDL-LQEMESSGVKPDIITWNSLLSGHLLQGSYENVLTNFR 357
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
+ G + + + SAL A GL KEIH +++++ L + +V + +VD Y K +
Sbjct: 358 SLQSAGFKPDSCSITSALQAVIGLGCFNLGKEIHGYIMRSKLEYDVYVCTSLVDKYIKND 417
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK-------------- 354
++ AE + +N + +S+I GY+ +G + A + + + E+
Sbjct: 418 CLDKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLNQMKEEGIKPDLVTWNSLVS 477
Query: 355 -------------------------NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVV 389
NVV WTA+ SG + +N S+ + +E V
Sbjct: 478 GYSMSGRSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYMDALQFFSQ-MQEENVK 536
Query: 390 TDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEII 449
++ + LL ACA + L G+EIH + +R G D + + L+DMY K G + A +
Sbjct: 537 PNSTTICTLLRACAGSSLLKIGEEIHCFSMRHGFLDDIYIATALIDMYGKGGKLKVAHEV 596
Query: 450 FQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSV 509
F+N E+ L +N M+ YA +GH E+ LF+EM + G++PDA+TF A+LS ++ G V
Sbjct: 597 FRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDEMRKTGVRPDAITFTALLSGCKNSGLV 656
Query: 510 EMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLN 569
G KYF+SM DY I+P +HY+CM+DL G+A L++A++F+ ++P + DA I G+ L
Sbjct: 657 MDGWKYFDSMKTDYNINPTIEHYSCMVDLLGKAGFLDEALDFIHAVPQKADASIWGAVLA 716
Query: 570 VCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRF 629
CRL+++ ++A A LLRLE N A Y + N+Y+ W ++ R+++ M +
Sbjct: 717 ACRLHKDIKIAEIAARNLLRLEPYNSANYALMMNIYSTFDRWGDVERLKESMTALGVKIP 776
Query: 630 AGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
SW+ V+ IH+F+ SHP+ IY L E+ ++
Sbjct: 777 NVWSWIQVKQTIHVFSTEGKSHPEEGEIYFELYQLISEIKKLG 819
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 129/550 (23%), Positives = 248/550 (45%), Gaps = 62/550 (11%)
Query: 39 NLLRESRKLFDEMPE-RNVFSWN-TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCG 96
N +RE +MP+ RN+ + + +++ ++ D + A +F ++ + +NS +
Sbjct: 45 NSVRELHAQIIKMPKKRNLVTMDGSMMRNYLQFGDFESATKVFFVGFARNYLLWNSFIEE 104
Query: 97 YINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSN 156
+ + G + L +F E+ D+ ++ D +T L +C+ L+ + G ++HA +VK
Sbjct: 105 FASFGGDSHEILAVFKELH--DKGVKFDSKALTVVLKICLALMELWLGMEVHACLVKRGF 162
Query: 157 DASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFW 216
+LI++Y K + A +VF+
Sbjct: 163 HVDVHLSCALINLYEKYLGIDGANQVFD-------------------------------- 190
Query: 217 RQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVK 276
+ L + WNT++ +++ E+ L+LF RM + + T L AC LR +
Sbjct: 191 -ETPLQEDFLWNTIVMANLRSEKWEDALELFRRMQSASAKATDGTIVKLLQACGKLRALN 249
Query: 277 CAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYS 336
K+IH +V++ G +SN + + IV +Y + + A NS S +S+I Y+
Sbjct: 250 EGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARVAFDSTEDHNSASWNSIISSYA 309
Query: 337 ----LQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGV---- 388
L G + + S + +++ W +L SG++ + E ++L+ F + +
Sbjct: 310 VNDCLNGAWDLLQEMESSGVKPDIITWNSLLSGHLLQGSYE---NVLTNFRSLQSAGFKP 366
Query: 389 ----VTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
+T AL VI LG L GKEIH YI+R ++ D + ++LVD Y K +
Sbjct: 367 DSCSITSALQAVIGLGCFNL------GKEIHGYIMRSKLEYDVYVCTSLVDKYIKNDCLD 420
Query: 445 YAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR 504
AE++F + +++ +N +I+ Y + G + A L +M E+GIKPD VT+ +++S +
Sbjct: 421 KAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLNQMKEEGIKPDLVTWNSLVSGYS 480
Query: 505 HCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE---EDA 561
G E N + + ++P + MI + A++F + E ++
Sbjct: 481 MSGRSEEALAVINRIKS-LGLTPNVVSWTAMISGCCQNENYMDALQFFSQMQEENVKPNS 539
Query: 562 VILGSFLNVC 571
+ + L C
Sbjct: 540 TTICTLLRAC 549
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/484 (24%), Positives = 209/484 (43%), Gaps = 81/484 (16%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
+R+LN E H I+ G T N ++ +YS++N L +R FD + N SWN
Sbjct: 245 LRALN--EGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARVAFDSTEDHNSASWN 302
Query: 61 TIISACIKSHDLKQARSLFD----SSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQS 116
+IIS+ + L A L S D++T+NS+L G++ YE + L F +QS
Sbjct: 303 SIISSYAVNDCLNGAWDLLQEMESSGVKPDIITWNSLLSGHLLQGSYE-NVLTNFRSLQS 361
Query: 117 ADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCY 176
A + D ++TS L + L G+++H +++++ + + +SL+D Y K C
Sbjct: 362 AG--FKPDSCSITSALQAVIGLGCFNLGKEIHGYIMRSKLEYDVYVCTSLVDKYIKNDCL 419
Query: 177 EEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN---DAVSWNTLISG 233
++A VF T+ N+ + N++++ +G + A K + E D V+WN+L+SG
Sbjct: 420 DKAEVVFHH-TKNKNICAWNSLISGYTYKGLFDNAEKLLNQMKEEGIKPDLVTWNSLVSG 478
Query: 234 YVQNGDAEE-----------------------------------GLKLFVRMGENGVRWN 258
Y +G +EE L+ F +M E V+ N
Sbjct: 479 YSMSGRSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYMDALQFFSQMQEENVKPN 538
Query: 259 EHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLL 318
T + L AC G +K +EIH + +++G + + ++++ ++D+Y K
Sbjct: 539 STTICTLLRACAGSSLLKIGEEIHCFSMRHGFLDDIYIATALIDMYGK------------ 586
Query: 319 LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDL 378
G ++ A F ++ EK + W + GY + E +F L
Sbjct: 587 -------------------GGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTL 627
Query: 379 LSEFVTKEGVVTDALILVILLGACALQAALHPG-KEIHAYILRMGVQMDKKLISTLVDMY 437
E + K GV DA+ LL C + G K + + + S +VD+
Sbjct: 628 FDE-MRKTGVRPDAITFTALLSGCKNSGLVMDGWKYFDSMKTDYNINPTIEHYSCMVDLL 686
Query: 438 SKCG 441
K G
Sbjct: 687 GKAG 690
>gi|302143938|emb|CBI23043.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 178/515 (34%), Positives = 267/515 (51%), Gaps = 75/515 (14%)
Query: 218 QPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKC 277
+P L VSW+ +I G+ QNG +E L+L RM G N T AS L AC L+N+
Sbjct: 8 KPNL---VSWSAVIGGFAQNGYDKEALELLCRMQAAGFEPNARTLASVLPACARLQNLNL 64
Query: 278 AKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSL 337
KEIH +V ++G +SNPFV +G+VDVY +C +M A + V+N S ++MIVGY
Sbjct: 65 GKEIHGYVTRHGFMSNPFVVNGLVDVYRRCADMGSALKIFSGFSVKNVVSYNTMIVGYCE 124
Query: 338 QGNMEE-------------------------------------ARRHFDSLTEKNVVVWT 360
GN+E+ A+ FD +TE++ W
Sbjct: 125 NGNVEKAKELFDQMELVGKDTISWNSMISGYADNLLKCEDLKAAQLAFDGVTERDTATWN 184
Query: 361 ALFSGYVKAQNCEALFDLLSEF---------VTKEGVVT--------------------- 390
L SGY E + +L+ + T G+++
Sbjct: 185 VLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQTS 244
Query: 391 ----DALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYA 446
D + I+L ACA A + GK++HA+ +R G ++D + + LVDMY+KCG++ +A
Sbjct: 245 SLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMYAKCGSIKHA 304
Query: 447 EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHC 506
++ +LV N M+ YA HGH ++ I LF ML G +PD VTF+++LS+ H
Sbjct: 305 MQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHA 364
Query: 507 GSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGS 566
G+VE G ++F+ MT Y ++P HY C++DL RA +L++A E +K IP + D+V+ G+
Sbjct: 365 GAVETGHEFFDLMTY-YNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKIPRKPDSVMWGA 423
Query: 567 FLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKG 626
L C + N EL A E L+ LE NN YV LAN+YA G W ++ R R+ ++
Sbjct: 424 LLGGCVIWGNVELGEIAAESLIELEPNNTGNYVLLANLYAYAGRWHDLDRTRQMIKDRGM 483
Query: 627 NRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
++ GCSW+ +IH+F D SH KT IY+ L
Sbjct: 484 HKSPGCSWIEDREDIHVFLSCDKSHEKTEDIYTTL 518
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 167/380 (43%), Gaps = 79/380 (20%)
Query: 17 IKAGLTLTTITT-NQLIHIYSKHNLLRESRKLFDEMP--ERNVFSWNTIISA----CIKS 69
I +G ++ + + N +I Y ++ + ++++LFD+M ++ SWN++IS +K
Sbjct: 103 IFSGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQMELVGKDTISWNSMISGYADNLLKC 162
Query: 70 HDLKQARSLFDSSPHKDLVTYNSMLCGY---------------INAEGYEAD-------- 106
DLK A+ FD +D T+N ++ GY + +G+E +
Sbjct: 163 EDLKAAQLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGII 222
Query: 107 -----------ALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTS 155
AL+LF EMQ++ +R D +TV L C +L + G+Q+HA ++
Sbjct: 223 SGHVENGHNELALRLFTEMQTSS--LRPDIYTVGIILPACARLATIARGKQVHAHSIRQG 280
Query: 156 NDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTF 215
+ ++L+DMY+KC + A +V+ + NL+S+NAM+ A
Sbjct: 281 YELDVHIGAALVDMYAKCGSIKHAMQVYNRISNP-NLVSQNAMLTA-------------- 325
Query: 216 WRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNV 275
Y +G +EG+ LF M NG R + TF S LS+C V
Sbjct: 326 ------------------YAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAGAV 367
Query: 276 KCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSI--SSMIV 333
+ E + + + + IVD+ + ++ A L+ K R S+ +++
Sbjct: 368 ETGHEFFDLMTYYNVTPSLKHYTCIVDLLSRAGRLDEAYE-LVKKIPRKPDSVMWGALLG 426
Query: 334 GYSLQGNMEEARRHFDSLTE 353
G + GN+E +SL E
Sbjct: 427 GCVIWGNVELGEIAAESLIE 446
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 122/559 (21%), Positives = 220/559 (39%), Gaps = 144/559 (25%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
+++LNL + + H + G N L+ +Y + + + K+F +NV S+N
Sbjct: 59 LQNLNLGKEI--HGYVTRHGFMSNPFVVNGLVDVYRRCADMGSALKIFSGFSVKNVVSYN 116
Query: 61 TIISACIKSHDLKQARSLFDSSP--HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSAD 118
T+I ++ ++++A+ LFD KD +++NSM+ GY AD L ++++A
Sbjct: 117 TMIVGYCENGNVEKAKELFDQMELVGKDTISWNSMISGY-------ADNLLKCEDLKAA- 168
Query: 119 EHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEE 178
QL AF T D + + V LI Y+ C E
Sbjct: 169 ---------------------------QL-AFDGVTERDTATWNV--LISGYACCNQLEN 198
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
NLI K +K +P + +WN +ISG+V+NG
Sbjct: 199 I----------QNLIQK----------------MKGDGFEP---NVYTWNGIISGHVENG 229
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
E L+LF M + +R + +T L AC L + K++H+ ++ G + + +
Sbjct: 230 HNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGA 289
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
+VD+Y KC ++ +A + N S ++M+ Y++ G+ +E
Sbjct: 290 ALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEG-------------- 335
Query: 359 WTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
ALF + G D + + +L +C A+ G E +
Sbjct: 336 -IALFRNML-----------------GNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLM 377
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
V K + +VD+ S+ G + A
Sbjct: 378 TYYNVTPSLKHYTCIVDLLSRAGRLDEA-------------------------------- 405
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISP-ETDHYACMID 537
+E + + KPD+V + A+L G+VE+GE S+ ++ P T +Y + +
Sbjct: 406 --YELVKKIPRKPDSVMWGALLGGCVIWGNVELGEIAAESLI---ELEPNNTGNYVLLAN 460
Query: 538 LY---GRANQLEKAIEFMK 553
LY GR + L++ + +K
Sbjct: 461 LYAYAGRWHDLDRTRQMIK 479
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 192/594 (32%), Positives = 306/594 (51%), Gaps = 43/594 (7%)
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
L A S+F++ +L+ +N+M G+ + ALKL++ M S + + +T
Sbjct: 13 LPYAISVFETIQEPNLLIWNTMFRGHALSPD-PVSALKLYVCMISLG--LLPNSYTFPFL 69
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L C KL G Q+H ++K + + +SLI MY + E+A +VF+ + +
Sbjct: 70 LKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHR-D 128
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
++S A+V G +E A F P + D VSWN +ISGYV+ G+ +E L+LF M
Sbjct: 129 VVSYTALVTGYASRGYIESARNMFDEIP-VKDVVSWNAMISGYVETGNYKEALELFKEMM 187
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
+ VR +E T + +SA +++ +++HSW+ +G SN + + ++D Y KC
Sbjct: 188 KTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKC---- 243
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
G ME A F L+ K+V+ W L GY
Sbjct: 244 ---------------------------GEMETACGLFLGLSYKDVISWNILIGGYTHLNL 276
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM--GVQMDKKL 429
+ L E + + G + + ++ +L ACA A+ G+ IH YI + GV L
Sbjct: 277 YKEALLLFQEML-RSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSL 335
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
++L+DMYSKCG++ A +F + + + L +N MI +A HG A +F M + I
Sbjct: 336 RTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEI 395
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
KPD +TFV +LSA H G +++G F SMT +YKI+P+ +HY CMIDL G + ++A
Sbjct: 396 KPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAE 455
Query: 550 EFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEG 609
E + ++ E D VI S L C+++ N EL + + L ++E NN YV L+N+YA G
Sbjct: 456 EMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFKIEPNNPGSYVLLSNIYATAG 515
Query: 610 NWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
W E+ RIR + +GMK + GCS + ++ +H F +GD HP+ IY +L
Sbjct: 516 RWNEVARIRGLLNDKGMK--KVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGML 567
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 153/595 (25%), Positives = 258/595 (43%), Gaps = 121/595 (20%)
Query: 7 KEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISAC 66
KE L H +K G L LI +Y ++ L ++ K+FD R+V S+ +++
Sbjct: 80 KEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTGY 139
Query: 67 IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEF 126
++ AR++FD P KD+V++N+M+ GY+ Y+ +AL+LF EM + +R DE
Sbjct: 140 ASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYK-EALELFKEMMKTN--VRPDES 196
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
T+ + ++ + ++ GRQ+H+++ ++ V++LID YSKC E AC +F G
Sbjct: 197 TMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGL 256
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
+ D +SWN LI GY +E L L
Sbjct: 257 S---------------------------------YKDVISWNILIGGYTHLNLYKEALLL 283
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLK--NGLISNPFVSSGIVDVY 304
F M +G N+ T S L AC L + + IH ++ K G+ + + + ++D+Y
Sbjct: 284 FQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMY 343
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
KC G++E A + F+S+ K++ W A+
Sbjct: 344 SKC-------------------------------GDIEAAHQVFNSMLHKSLPAWNAMIF 372
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
G+ A FD+ S + K + D + V LL AC+ HA +L +G
Sbjct: 373 GFAMHGRANAAFDIFSR-MRKNEIKPDDITFVGLLSACS-----------HAGMLDLG-- 418
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
+ + ++ Y I L Y MI H G ++A EEM
Sbjct: 419 --RHIFRSMTHNYK---------------ITPKLEHYGCMIDLLGHSGLFKEA----EEM 457
Query: 485 LEK-GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD-HYACMIDLY--- 539
+ ++PD V + ++L A + G+VE+GEK+ ++ +KI P Y + ++Y
Sbjct: 458 ISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNL---FKIEPNNPGSYVLLSNIYATA 514
Query: 540 GRANQLEKAIEF-----MKSIP----TEEDAVILGSFLNVCRLNRNAELAGEAEE 585
GR N++ + MK +P E D+V+ + RN E+ G EE
Sbjct: 515 GRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEE 569
Score = 45.8 bits (107), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 116/269 (43%), Gaps = 25/269 (9%)
Query: 4 LNL-KEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPER-----NVF 57
LNL KEAL+ + +++G + +T ++H + + R + + +R N
Sbjct: 274 LNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNAS 333
Query: 58 SWNT-IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQS 116
S T +I K D++ A +F+S HK L +N+M+ G+ G A +F M+
Sbjct: 334 SLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFA-MHGRANAAFDIFSRMRK 392
Query: 117 ADEHIRMDEFTVTSTLNLCVKLLNVGFGRQL-----HAFMVKTSNDASGFAVSSLIDMYS 171
+ I+ D+ T L+ C + GR + H + + + G +ID+
Sbjct: 393 NE--IKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYG----CMIDLLG 446
Query: 172 KCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALK----TFWRQPELNDAVSW 227
++EA + T E + + +++ AC G +E+ K F +P N+ S+
Sbjct: 447 HSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFKIEP--NNPGSY 504
Query: 228 NTLISGYVQNGDAEEGLKLFVRMGENGVR 256
L + Y G E ++ + + G++
Sbjct: 505 VLLSNIYATAGRWNEVARIRGLLNDKGMK 533
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 185/570 (32%), Positives = 300/570 (52%), Gaps = 45/570 (7%)
Query: 101 EGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASG 160
E + AL + M+ D I +D F + S L C ++ G+++H F VK +
Sbjct: 87 ESHPRYALNTYTYMRKLD--IEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDV 144
Query: 161 FAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPE 220
F V++L+ MYS+C A +F+ +E +++S + M+ A T +
Sbjct: 145 FVVNALMQMYSECGSLVSARLLFDKMSER-DVVSWSTMIRAYI----------TLFYGFS 193
Query: 221 LNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKE 280
VSW +I+GY++ D EEG +LFVRM E V N+ T S + +C + V+ K
Sbjct: 194 QRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKR 253
Query: 281 IHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGN 340
+H+++L+NG + +++ +VD+Y KC G
Sbjct: 254 LHAYILRNGFGMSLALATALVDMYGKC-------------------------------GE 282
Query: 341 MEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLG 400
+ AR FDS+ K+V+ WTA+ S Y +A + F L + + GV + L +V LL
Sbjct: 283 IRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQ-MRDNGVRPNELTMVSLLS 341
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL 460
CA+ AL GK HAYI + GV++D L + L+DMY+KCG+++ A+ +F I+RD+
Sbjct: 342 LCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICT 401
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
+NVM+A Y HG+ EKA+ LF EM G+KP+ +TF+ L A H G V G+ F M
Sbjct: 402 WNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMI 461
Query: 521 ADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELA 580
D+ + P+ +HY CM+DL GRA L++A + ++S+P + I G+ L C++++N+ +
Sbjct: 462 HDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIHKNSNMG 521
Query: 581 GEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHE 640
A +LL LE N V ++N+YAA W ++ +RK ++ + G S + V
Sbjct: 522 ELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKEPGMSSIEVNGL 581
Query: 641 IHIFTVGDVSHPKTNAIYSVLAIFTGELYE 670
+H F +GD +HP I +LA + +L E
Sbjct: 582 VHDFKMGDTAHPLIEKISEMLAEMSKKLKE 611
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 112/491 (22%), Positives = 210/491 (42%), Gaps = 81/491 (16%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H ++K GL N L+ +YS+ L +R LFD+M ER+V SW+T+I A I
Sbjct: 132 HGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYI----- 186
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+LF + +V++ +M+ GYI E + +LF+ M +E++ ++ T+ S +
Sbjct: 187 ----TLFYGFSQRSIVSWTAMIAGYIRCNDLE-EGERLFVRM--IEENVFPNDITMLSLI 239
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C + V G++LHA++++ S ++L+DMY KC A +F+ +
Sbjct: 240 ISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNK--- 296
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
D ++W +IS Y Q + +LFV+M +
Sbjct: 297 ------------------------------DVMTWTAMISAYAQANCIDYAFQLFVQMRD 326
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
NGVR NE T S LS C + K H+++ K G+ + + + ++D+Y KC
Sbjct: 327 NGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKC----- 381
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G++ A+R F ++++ W + +GY
Sbjct: 382 --------------------------GDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYG 415
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR-MGVQMDKKLIS 431
E L +E T GV + + + L AC+ + GK + ++ G+ +
Sbjct: 416 EKALKLFTEMETL-GVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYG 474
Query: 432 TLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+VD+ + G + A + ++ + ++ ++ M+A H + L E+L ++
Sbjct: 475 CMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIHKNSNMGELAARELL--ALE 532
Query: 491 PDAVTFVAILS 501
P + ++S
Sbjct: 533 PQNCGYKVLMS 543
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 191/609 (31%), Positives = 315/609 (51%), Gaps = 46/609 (7%)
Query: 57 FSWNTIISACIKSHD---LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIE 113
++ + ++ CI S + L A S+F++ +L+ +N+M G+ + A+KL++
Sbjct: 35 YALSRLLEFCILSPNFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSD-PVSAIKLYVC 93
Query: 114 MQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKC 173
M S + + +T L C KL G+Q+H ++K + + +SLI MY K
Sbjct: 94 MISLG--LLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKN 151
Query: 174 RCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISG 233
+++A +VF+G + +++S A++ G +E A K F P + D VSWN +ISG
Sbjct: 152 GRWKDAHKVFDGSSHR-DVVSYTALITGYASRGYIESAQKMFDEIP-VKDVVSWNAIISG 209
Query: 234 YVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISN 293
Y G+ +E L LF M + V+ +E T + +SAC +++ +++HSW+ +GL SN
Sbjct: 210 YADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSN 269
Query: 294 PFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
+ + ++D+Y KC G +E A F L+
Sbjct: 270 LKIVNALIDLYSKC-------------------------------GEVETACGLFQGLSN 298
Query: 354 KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
K+V+ W + GY + L E + + G + + ++ +L ACA A+ G+
Sbjct: 299 KDVISWNTMIGGYTHLNLYKEALLLFQEML-RSGENPNDVTMLSILPACAQLGAIDFGRW 357
Query: 414 IHAYILRM--GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
IH YI + GV L ++L+DMY+KCG++ A +F + R L N MI +A H
Sbjct: 358 IHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMH 417
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH 531
G A +F M + GI+PD +TFV +LSA H G +++G + F SMT +YKI+P+ +H
Sbjct: 418 GRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEH 477
Query: 532 YACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLE 591
Y CMIDL G ++A E + ++ E D VI S L C+++ N EL +KL+++E
Sbjct: 478 YGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIE 537
Query: 592 GNNKARYVQLANVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDV 649
N YV L+N+YA G W E+ IR + +GMK + GCS + ++ +H F +GD
Sbjct: 538 PENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMK--KVPGCSSIEIDSVVHEFIIGDK 595
Query: 650 SHPKTNAIY 658
HP+ IY
Sbjct: 596 FHPRNREIY 604
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 148/591 (25%), Positives = 258/591 (43%), Gaps = 121/591 (20%)
Query: 7 KEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISAC 66
KE H +K G L LI +Y K+ +++ K+FD R+V S+ +I+
Sbjct: 120 KEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGY 179
Query: 67 IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEF 126
++ A+ +FD P KD+V++N+++ GY + G +AL LF EM + ++ DE
Sbjct: 180 ASRGYIESAQKMFDEIPVKDVVSWNAIISGYADT-GNNKEALDLFKEMMKTN--VKPDES 236
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
T+ + ++ C + ++ GRQ+H+++ ++ V++LID+YSKC E AC +F+G
Sbjct: 237 TMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGL 296
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
+ + D +SWNT+I GY +E L L
Sbjct: 297 SNK---------------------------------DVISWNTMIGGYTHLNLYKEALLL 323
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLK--NGLISNPFVSSGIVDVY 304
F M +G N+ T S L AC L + + IH ++ K G+ + + + ++D+Y
Sbjct: 324 FQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMY 383
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
KC G++E A + F+S+ + + A+
Sbjct: 384 AKC-------------------------------GDIEAAHQVFNSMHHRTLSACNAMIF 412
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
G+ A FD+ S + K G+ D + V LL AC+ H+ +L +G
Sbjct: 413 GFAMHGRANAAFDIFSR-MRKNGIEPDDITFVGLLSACS-----------HSGMLDLG-- 458
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
+++ ++ Y I L Y MI H G ++A EEM
Sbjct: 459 --RRIFRSMTQNYK---------------ITPKLEHYGCMIDLLGHLGLFKEA----EEM 497
Query: 485 LEK-GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD-HYACMIDLY--- 539
+ ++PD V + ++L A + G+VE+GE + + KI PE Y + ++Y
Sbjct: 498 INTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLI---KIEPENPGSYVLLSNIYATA 554
Query: 540 GRANQLE--KAI---EFMKSIP----TEEDAVILGSFLNVCRLNRNAELAG 581
GR N++ +A+ + MK +P E D+V+ + RN E+ G
Sbjct: 555 GRWNEVANIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYG 605
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 146/331 (44%), Gaps = 64/331 (19%)
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLL 319
H S L C L++++ IH+ ++K GL N NYA S LL
Sbjct: 3 HPSLSLLHNCKTLQSLRI---IHAQMIKTGL-----------------HNTNYALSRLL- 41
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLL 379
I+ + G + A F+++ E N+++W +F G+ + + + L
Sbjct: 42 ---------EFCILSPNFDG-LPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSAIKLY 91
Query: 380 SEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
++ G++ ++ LL +CA G++IH ++L++G ++D + ++L+ MY K
Sbjct: 92 VCMISL-GLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVK 150
Query: 440 CGNMTYAEIIFQNFIERDLVLY-------------------------------NVMIACY 468
G A +F RD+V Y N +I+ Y
Sbjct: 151 NGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGY 210
Query: 469 AHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE 528
A G+ ++A+ LF+EM++ +KPD T V ++SA GS+++G + +S D+ +
Sbjct: 211 ADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQ-VHSWIDDHGLGSN 269
Query: 529 TDHYACMIDLYGRANQLEKAIEFMKSIPTEE 559
+IDLY + ++E A + + ++
Sbjct: 270 LKIVNALIDLYSKCGEVETACGLFQGLSNKD 300
>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
Length = 762
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 197/636 (30%), Positives = 307/636 (48%), Gaps = 99/636 (15%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLV 88
N L+ +Y + +K+FDEM +N+ SW +ISA K+ +L++A
Sbjct: 126 NCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKA------------- 172
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLH 148
++LF +MQ++ IR + S L C+ + G+Q+H
Sbjct: 173 -------------------IRLFSDMQASG--IRPNSAVYMSLLQSCLGPSFLELGKQIH 211
Query: 149 AFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEM 208
+ +++ +A+ +++ +MY +C E A VF+G
Sbjct: 212 SHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGM---------------------- 249
Query: 209 EMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSA 268
+ +AV+W L+ GY Q E L+LF RM GV +E F+ L
Sbjct: 250 -----------DAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKV 298
Query: 269 CCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSI 328
CCGL + ++IHS ++K G S V + +VD Y KC
Sbjct: 299 CCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKC--------------------- 337
Query: 329 SSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGV 388
G++E A R F ++E N V W+AL SG+ ++ E + + + EGV
Sbjct: 338 ----------GDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRS-EGV 386
Query: 389 VTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEI 448
V ++ I + ACA QA L+ G + H ++ G+ S +V MYSKCG + YA
Sbjct: 387 VLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARR 446
Query: 449 IFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGS 508
F++ E D V + +I+ YA+HG+ +A+ F M G++P+AVTF+A+L+A H G
Sbjct: 447 AFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGL 506
Query: 509 VEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFL 568
V ++Y SM+ DY + P DHY CMID Y RA L++A+E + +P E DA+ S L
Sbjct: 507 VAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLL 566
Query: 569 NVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNR 628
C + + +L A E L RL+ + A Y+ L N+Y+A G W E G +RK M + +
Sbjct: 567 GGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFGKWEEAGHVRKLMAERELKK 626
Query: 629 FAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIF 664
CSW+ V+ ++H F VGD HP+T AIYS L F
Sbjct: 627 EVSCSWISVKGQVHRFVVGDRHHPQTEAIYSKLEEF 662
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/465 (23%), Positives = 199/465 (42%), Gaps = 69/465 (14%)
Query: 98 INAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSND 157
++ +G +A EM AD + + + C KL ++ GR +H + +T +
Sbjct: 62 LSKQGKLKEAHDFLKEMDDAD--VSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKN 119
Query: 158 ASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWR 217
SG + L+ MY C + +VF+ + NL+S +++A + GE+E A
Sbjct: 120 PSGSIENCLLRMYCDCGSCIDVQKVFDEMLMK-NLVSWVIVISAYAKNGELEKA------ 172
Query: 218 QPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKC 277
++LF M +G+R N + S L +C G ++
Sbjct: 173 --------------------------IRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLEL 206
Query: 278 AKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSL 337
K+IHS V++ L +N V + I ++Y +C
Sbjct: 207 GKQIHSHVIRAQLNANITVETAICNMYVRC------------------------------ 236
Query: 338 QGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVI 397
G +E A+ FD + +N V WT L GY +A+ E +L + EGV D + I
Sbjct: 237 -GWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAM-EGVELDEFVFSI 294
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD 457
+L C G++IH++I+++G + + + + LVD Y KCG++ A F E +
Sbjct: 295 VLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPN 354
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFN 517
V ++ +I+ ++ G E I +F + +G+ ++ + ++ A ++ MG +
Sbjct: 355 DVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHG 414
Query: 518 SMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAV 562
+S A M+ +Y + +L+ A +SI E DAV
Sbjct: 415 DAIKRGLVSYLYGESA-MVTMYSKCGRLDYARRAFESI-DEPDAV 457
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 200/625 (32%), Positives = 314/625 (50%), Gaps = 75/625 (12%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
E++VF+ N ++ K D++ A ++F+ P D+V++N+ + G + G++ AL+L +
Sbjct: 237 EKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVT-HGHDHRALELLL 295
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
+M+S+ + + FT++S L C GRQ+H FMVK D F L+DMY+K
Sbjct: 296 QMKSSG--LVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAK 353
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
G ++ A K F P D + WN LIS
Sbjct: 354 --------------------------------HGFLDDARKVFDFMPR-RDLILWNALIS 380
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRW--NEHTFASALSACCGLRNVKCAKEIHSWVLKNGL 290
G +G E L LF RM + G+ N T AS L + + +++H+ K GL
Sbjct: 381 GCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGL 440
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
+S+ V +G++D Y KC ++YA + + K R+ ISS
Sbjct: 441 LSDSHVINGLIDSYWKCGQLDYA--IKVFKESRSDDIISS-------------------- 478
Query: 351 LTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVT--KEGVVTDALILVILLGACALQAAL 408
+ TAL C+ D + FV ++G+ D+ +L LL AC +A
Sbjct: 479 -----TTMMTAL-------SQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAY 526
Query: 409 HPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACY 468
GK++HA++++ D + LV Y+KCG++ A++ F ER +V ++ MI
Sbjct: 527 EQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGL 586
Query: 469 AHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE 528
A HGH ++A+ LF ML++G+ P+ +T ++LSA H G V+ +KYF SM + I
Sbjct: 587 AQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRT 646
Query: 529 TDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLL 588
+HYACMID+ GRA +LE A+E + ++P + +A + G+ L R++R+ EL A EKL
Sbjct: 647 EEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVHRDPELGRMAAEKLF 706
Query: 589 RLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGD 648
LE +V LAN YA+ G W EM ++RK M+ + SWV ++ ++H F VGD
Sbjct: 707 TLEPEKSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKEPAMSWVEIKDKVHTFIVGD 766
Query: 649 VSHPKTNAIYSVLAIFTGELYEIAG 673
SHP T IY LA G+L AG
Sbjct: 767 KSHPMTRDIYGKLAEL-GDLMNKAG 790
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 129/508 (25%), Positives = 215/508 (42%), Gaps = 105/508 (20%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEM----PERNVFSWNTIISACIK 68
H A+ L N L+ +Y ++ E+R++FDE ERN SW
Sbjct: 123 HALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSW--------- 173
Query: 69 SHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
N+M+ Y+ + DA+ +F EM + E R +EF
Sbjct: 174 ----------------------NTMISAYVKND-QSGDAIGVFREMVWSGE--RPNEFGF 208
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE 188
+ +N C ++ GRQ+H +V+T + F ++L+DMYSK E A VFE
Sbjct: 209 SCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFE---- 264
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
+M A W N ISG V +G L+L +
Sbjct: 265 ------------------KMPAADVVSW-----------NAFISGCVTHGHDHRALELLL 295
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
+M +G+ N T +S L AC G ++IH +++K + FV+ G+VD+Y K
Sbjct: 296 QMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAK-- 353
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
G +++AR+ FD + +++++W AL SG
Sbjct: 354 -----------------------------HGFLDDARKVFDFMPRRDLILWNALISGCSH 384
Query: 369 AQNCEALFDLLSEFVTKEGVVTDA--LILVILLGACALQAALHPGKEIHAYILRMGVQMD 426
+ L + KEG+ D L +L + A A+ +++HA ++G+ D
Sbjct: 385 DGRHGEVLSLFHR-MRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSD 443
Query: 427 KKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
+I+ L+D Y KCG + YA +F+ D++ M+ + H E AI LF +ML
Sbjct: 444 SHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLR 503
Query: 487 KGIKPDAVTFVAILSAFRHCGSVEMGEK 514
KG++PD+ ++L+A + E G++
Sbjct: 504 KGLEPDSFVLSSLLNACTSLSAYEQGKQ 531
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 127/487 (26%), Positives = 222/487 (45%), Gaps = 70/487 (14%)
Query: 75 ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNL 134
AR++FD P V+++S++ Y N G DAL F M+ + +EF + L
Sbjct: 56 ARAVFDEIPDPCHVSWSSLVTAYSN-NGMPRDALLAFRAMRG--RGVPCNEFALPVVLK- 111
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
C +V FG Q+HA V T F ++L+ +Y +EA R+F+ E V +
Sbjct: 112 CAP--DVRFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFD---EYVGV-- 164
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
GE +AVSWNT+IS YV+N + + + +F M +G
Sbjct: 165 ----------GGE--------------RNAVSWNTMISAYVKNDQSGDAIGVFREMVWSG 200
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
R NE F+ ++AC G R+++ +++H V++ G + F ++ +VD+Y K
Sbjct: 201 ERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKL------- 253
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEA 374
G++E A F+ + +VV W A SG V +
Sbjct: 254 ------------------------GDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHR 289
Query: 375 LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLV 434
+LL + + G+V + L +L ACA A + G++IH ++++ D+ + LV
Sbjct: 290 ALELLLQ-MKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLV 348
Query: 435 DMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAV 494
DMY+K G + A +F RDL+L+N +I+ +H G + + LF M ++G+ D V
Sbjct: 349 DMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLD-V 407
Query: 495 TFVAILSAFRHCGSVEM--GEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
+ S + S E + +++ + ++ +ID Y + QL+ AI+
Sbjct: 408 NRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVF 467
Query: 553 KSIPTEE 559
K +++
Sbjct: 468 KESRSDD 474
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 104/434 (23%), Positives = 181/434 (41%), Gaps = 80/434 (18%)
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
G LH+ ++K S +GF+ + L+ +YS+CR A VF+ + +
Sbjct: 23 GAHLHSHLLK-SGLLAGFS-NHLLTLYSRCRLPSAARAVFDEIPDPCH------------ 68
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
VSW++L++ Y NG + L F M GV NE FA
Sbjct: 69 ---------------------VSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNE--FA 105
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
+ C +V+ ++H+ + L+ + FV++ +V VY
Sbjct: 106 LPVVLKCA-PDVRFGAQVHALAVATRLVHDVFVANALVAVYG------------------ 146
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLT----EKNVVVWTALFSGYVKAQNCEALFDLL 379
G+ G ++EARR FD E+N V W + S YVK +
Sbjct: 147 ----------GF---GMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVF 193
Query: 380 SEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
E V G + ++ AC L G+++H ++R G + D + LVDMYSK
Sbjct: 194 REMVW-SGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSK 252
Query: 440 CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
G++ A +F+ D+V +N I+ HGH+ +A+ L +M G+ P+ T ++
Sbjct: 253 LGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSV 312
Query: 500 LSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC--MIDLYGRANQLEKAIEFMKSIPT 557
L A G+ +G + M K + D + ++D+Y + L+ A + +P
Sbjct: 313 LKACAGAGAFNLGRQIHGFMV---KAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMP- 368
Query: 558 EEDAVILGSFLNVC 571
D ++ + ++ C
Sbjct: 369 RRDLILWNALISGC 382
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/437 (21%), Positives = 170/437 (38%), Gaps = 98/437 (22%)
Query: 17 IKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQAR 76
+KA L+ +Y+KH L ++RK+FD MP R++ WN +IS C SHD
Sbjct: 333 VKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGC--SHD----- 385
Query: 77 SLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCV 136
G + L LF M+ + ++ T+ S L
Sbjct: 386 -------------------------GRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTA 420
Query: 137 KLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKN 196
+ RQ+HA K + ++ LID Y KC
Sbjct: 421 SSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKC----------------------- 457
Query: 197 AMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVR 256
G+++ A+K F ++ +D +S T+++ Q E+ +KLFV+M G+
Sbjct: 458 ---------GQLDYAIKVF-KESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLE 507
Query: 257 WNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESM 316
+ +S L+AC L + K++H+ ++K S+ F + +V Y KC
Sbjct: 508 PDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKC--------- 558
Query: 317 LLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALF 376
G++E+A F L E+ +V W+A+ G + + +
Sbjct: 559 ----------------------GSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRAL 596
Query: 377 DLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE-IHAYILRMGVQMDKKLISTLVD 435
DL + EGV + + L +L AC + K+ + G+ ++ + ++D
Sbjct: 597 DLFHRML-DEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMID 655
Query: 436 MYSKCGNMTYAEIIFQN 452
+ + G + A + N
Sbjct: 656 ILGRAGKLEDAMELVNN 672
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 195/602 (32%), Positives = 306/602 (50%), Gaps = 71/602 (11%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N +I+ +K+ + +ARS+F DL+++N+M+ G G E ++ +F+ + +
Sbjct: 974 NCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISG-CTLSGLEECSVGMFVHLLR--D 1030
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGF-GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEE 178
+ D+FTV S L C L + Q+HA +K F ++LID+YSK
Sbjct: 1031 SLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSK------ 1084
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
G+ME A F Q D SWN ++ GY+ +G
Sbjct: 1085 --------------------------RGKMEEAEFLFVNQDGF-DLASWNAIMHGYIVSG 1117
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
D + L+L++ M E+G R ++ T +A A GL +K K+IH+ V+K G + FV+S
Sbjct: 1118 DFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTS 1177
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
G++D+Y KC G ME ARR F + + V
Sbjct: 1178 GVLDMYLKC-------------------------------GEMESARRVFSEIPSPDDVA 1206
Query: 359 WTALFSGYVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
WT + SG V+ Q ALF ++K V D L+ AC+L AL G++IHA
Sbjct: 1207 WTTMISGCVENGQEEHALFTYHQMRLSK--VQPDEYTFATLVKACSLLTALEQGRQIHAN 1264
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
I+++ D ++++LVDMY+KCGN+ A +F+ R + +N MI A HG+ ++A
Sbjct: 1265 IVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEA 1324
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID 537
+ F+ M +G+ PD VTF+ +LSA H G V + F SM +Y I PE +HY+C++D
Sbjct: 1325 LQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVD 1384
Query: 538 LYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKAR 597
RA ++E+A + + S+P E A + + LN CR+ + E EKLL LE ++ A
Sbjct: 1385 ALSRAGRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAA 1444
Query: 598 YVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
YV L+NVYAA W + R MR + + G SWV +++++H+F GD SH +T+ I
Sbjct: 1445 YVLLSNVYAAANQWENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVI 1504
Query: 658 YS 659
Y+
Sbjct: 1505 YN 1506
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 127/553 (22%), Positives = 232/553 (41%), Gaps = 81/553 (14%)
Query: 52 PERNVFSWNTIISACIKSHDLKQARSLFDSSP--HKDLVTYNSMLCGYINAEGYEADALK 109
P+R F N +I+ K L AR LFD++P ++DLVT+N++L D
Sbjct: 689 PDR--FVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAILSALAAHADKSHDGFH 746
Query: 110 LFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDM 169
LF ++ + + T+ +C+ + LH + VK F +L+++
Sbjct: 747 LFRLLRRS--VVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNI 804
Query: 170 YSKCRCYEEACRVFEG-CTEEVNL--ISKNAMVAAC------------------------ 202
Y+K EA +F+G +V L + A V C
Sbjct: 805 YAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTL 864
Query: 203 --------CREGEMEM------ALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
C++ +E+ A K F + +D + WN +S ++Q G+A E + FV
Sbjct: 865 RTLSRVVKCKKNILELKQFKAYATKLFMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFV 924
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
M + V + TF L+ GL ++ K+IH V+++GL V + ++++Y K
Sbjct: 925 DMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKA- 983
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
G++ AR F + E +++ W + SG
Sbjct: 984 ------------------------------GSVSRARSVFGQMNEVDLISWNTMISGCTL 1013
Query: 369 AQNCEALFDLLSEFVTKEGVVTDALILVILLGAC-ALQAALHPGKEIHAYILRMGVQMDK 427
+ E + + ++ ++ D + +L AC +L+ + +IHA ++ GV +D
Sbjct: 1014 SGLEECSVGMFVHLL-RDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDS 1072
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
+ + L+D+YSK G M AE +F N DL +N ++ Y G KA+ L+ M E
Sbjct: 1073 FVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQES 1132
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEK 547
G + D +T V A ++ G K +++ + + + ++D+Y + ++E
Sbjct: 1133 GERSDQITLVNAAKAAGGLVGLKQG-KQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMES 1191
Query: 548 AIEFMKSIPTEED 560
A IP+ +D
Sbjct: 1192 ARRVFSEIPSPDD 1204
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 112/266 (42%), Gaps = 67/266 (25%)
Query: 4 LNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
+ LK+ H +K G L T+ ++ +Y K + +R++F E+P + +W T+I
Sbjct: 1152 VGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMI 1211
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
S C+++ G E AL + +M+ + ++
Sbjct: 1212 SGCVEN--------------------------------GQEEHALFTYHQMRLS--KVQP 1237
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
DE+T + + C L + GRQ+HA +VK + F ++SL+DMY+KC E+A +F
Sbjct: 1238 DEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLF 1297
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
+ T + S NAM I G Q+G+A+E
Sbjct: 1298 KR-TNTRRIASWNAM--------------------------------IVGLAQHGNAKEA 1324
Query: 244 LKLFVRMGENGVRWNEHTFASALSAC 269
L+ F M GV + TF LSAC
Sbjct: 1325 LQFFKYMKSRGVMPDRVTFIGVLSAC 1350
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIE--RDLVLYNVMIACY 468
GK HA IL G D+ + + L+ MY+KCG+++ A +F + RDLV +N +++
Sbjct: 675 GKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAILSAL 734
Query: 469 AHHG 472
A H
Sbjct: 735 AAHA 738
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 194/617 (31%), Positives = 315/617 (51%), Gaps = 47/617 (7%)
Query: 78 LFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVK 137
LF+S+ + ++ + SML Y + + + A + +F MQ +R D F L
Sbjct: 56 LFNSTLNPNVFVFTSMLRFYSHLQDH-AKVVLMFEHMQGCG--VRPDAFVYPI---LIKS 109
Query: 138 LLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE--------- 188
N G G HA ++K + + F +++IDMY++ A +VF+ +
Sbjct: 110 AGNGGIG--FHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWN 167
Query: 189 -----------------------EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAV 225
E N+I+ AMV + ++E A + F PE V
Sbjct: 168 AMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPE-RSVV 226
Query: 226 SWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWV 285
SWN ++SGY QNG AEE L+LF M G+ +E T+ + +SAC + A + +
Sbjct: 227 SWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTL 286
Query: 286 LKNGLISNPFVSSGIVDVYCKCENMNYAESML-LLKGVRNSFSISSMIVGYSLQGNMEEA 344
+ + N FV + ++D+Y KC ++ A + L RNS + ++MI Y+ GN++ A
Sbjct: 287 HQKQIQLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSA 346
Query: 345 RRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACAL 404
R F+++ +NVV W ++ +GY + +L E +T + + D + +V ++ AC
Sbjct: 347 RELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGH 406
Query: 405 QAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVM 464
AL G + ++ +++ + ++ MYS+CG+M A+ +FQ RD+V YN +
Sbjct: 407 LGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTL 466
Query: 465 IACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYK 524
I+ +A HGH +AI L M E GI+PD VTF+ +L+A H G +E G K F S+
Sbjct: 467 ISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIK---- 522
Query: 525 ISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAE 584
P DHYACM+DL GR +LE A M+ +P E A + GS LN R+++ EL A
Sbjct: 523 -DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAA 581
Query: 585 EKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIF 644
KL LE +N ++ L+N+YA+ G W ++ RIR+ M+ + G SWV ++H F
Sbjct: 582 NKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKF 641
Query: 645 TVGDVSHPKTNAIYSVL 661
V D SH +++ IY +L
Sbjct: 642 IVADRSHERSDDIYQLL 658
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 141/534 (26%), Positives = 243/534 (45%), Gaps = 90/534 (16%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLV 88
N ++ Y K +++ LFD MPERNV +W +++ K DL+ AR FD P + +V
Sbjct: 167 NAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVV 226
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCV----KLLNVGFG 144
++N+ML GY G + L+LF EM +A I DE T + ++ C L
Sbjct: 227 SWNAMLSGYAQ-NGLAEEVLRLFDEMVNAG--IEPDETTWVTVISACSSRGDPCLAASLV 283
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
R LH ++ + F ++L+DMY+KC A R+F+ N ++ NAM++A R
Sbjct: 284 RTLHQKQIQL----NCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTR 339
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM-GENGVRWNEHTFA 263
G ++ A + F P N V+WN++I+GY QNG + ++LF M + +E T
Sbjct: 340 VGNLDSARELFNTMPGRN-VVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMV 398
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
S +SAC L A E+ +WV++ F++ + + N
Sbjct: 399 SVISACGHL----GALELGNWVVR-------FLTENQIKLSISGHN-------------- 433
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV 383
+MI YS G+ME+A+R F + ++VV + L SG+ + +L+S +
Sbjct: 434 ------AMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMST-M 486
Query: 384 TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNM 443
+ G+ D + + +L AC+ HA +L G ++ + + +D Y+
Sbjct: 487 KEGGIEPDRVTFIGVLTACS-----------HAGLLEEGRKVFESIKDPAIDHYA----- 530
Query: 444 TYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAF 503
M+ G E A E M ++P A + ++L+A
Sbjct: 531 -------------------CMVDLLGRVGELEDAKRTMERM---PMEPHAGVYGSLLNAS 568
Query: 504 RHCGSVEMGEKYFNSMTADYKISPE-TDHYACMIDLY---GRANQLEKAIEFMK 553
R VE+GE N + +++ P+ + ++ + ++Y GR +E+ E MK
Sbjct: 569 RIHKQVELGELAANKL---FELEPDNSGNFILLSNIYASAGRWKDVERIREAMK 619
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 72/154 (46%), Gaps = 11/154 (7%)
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKC-GNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
+++HA I+ + ++ L++ ++ Y ++F + + ++ ++ M+ Y+H
Sbjct: 18 RQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNPNVFVFTSMLRFYSH 77
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD 530
K +L+FE M G++PDA + ++ + G+ +G F++ K+ +D
Sbjct: 78 LQDHAKVVLMFEHMQGCGVRPDAFVYPILIKS---AGNGGIG---FHAHV--LKLGHGSD 129
Query: 531 HYA--CMIDLYGRANQLEKAIEFMKSIPTEEDAV 562
+ +ID+Y R + A + IP E V
Sbjct: 130 AFVRNAVIDMYARLGPIGHARKVFDEIPDYERKV 163
>gi|449435950|ref|XP_004135757.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Cucumis sativus]
Length = 606
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 181/593 (30%), Positives = 305/593 (51%), Gaps = 70/593 (11%)
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
++A +LF+ P +D+VT+ +M+ G+ + Y A +F EM ++ ++ + FT++S L
Sbjct: 60 REACNLFNEIPERDVVTWTAMIVGFTSCNHYH-QAWTMFSEMLRSE--VQPNAFTMSSVL 116
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYS-KCRCYEEACRVFEGCTEEVN 191
C + + G H+ K D S + ++L+DMY+ C ++A VF
Sbjct: 117 KACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDALSVFN------- 169
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
++ LKT AVSW TLI+G+ GD GL F +M
Sbjct: 170 -----------------DIPLKT---------AVSWTTLIAGFTHRGDGYSGLLAFRQML 203
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
V N +F+ A AC + + C K+IH+ V K GL + V + I+D+YC+C N
Sbjct: 204 LEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRC---N 260
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
Y + +A+R F LTEKN++ W L +GY ++ +
Sbjct: 261 Y----------------------------LCDAKRCFGELTEKNLITWNTLIAGYERSDS 292
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
E+L + EG + + ACA A L G+++H I+R G + LI+
Sbjct: 293 SESLSLFFQ--MGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVALIN 350
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
+L+DMY+KCG+++ + +F + RDLV + M+ Y HG+ ++A+ LF+EM++ GI+P
Sbjct: 351 SLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGIQP 410
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
D + F+ +L H G V+ G KYF SM DY I+P+ + Y C++DL GRA ++E+A +
Sbjct: 411 DRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAFQL 470
Query: 552 MKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNW 611
++++P E D + G+ L C+ + + L A +++L N Y+ L+ +YAAEG W
Sbjct: 471 VENMPFEPDESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAGTYLLLSKIYAAEGKW 530
Query: 612 AEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIF 664
E ++RK M+GM + G SW+ + +E++ F VG P ++ V+ +
Sbjct: 531 GEFAKMRKLMKGMNKKKEVGKSWIEIRNEVYSFVVGAKMGPHIEWVHKVIDVL 583
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/423 (21%), Positives = 182/423 (43%), Gaps = 75/423 (17%)
Query: 53 ERNVFSWNTIISACIKS-HDLKQARSLFDSSPHKDLVTYNSMLCGYIN-AEGYEADALKL 110
+R+V+ N ++ S + A S+F+ P K V++ +++ G+ + +GY L
Sbjct: 141 DRSVYVQNALLDMYAASCATMDDALSVFNDIPLKTAVSWTTLIAGFTHRGDGYSG----L 196
Query: 111 FIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMY 170
Q E + + F+ + C + + G+Q+HA + K ++S++DMY
Sbjct: 197 LAFRQMLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMY 256
Query: 171 SKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTL 230
+C +A R F TE+ NLI +WNTL
Sbjct: 257 CRCNYLCDAKRCFGELTEK-NLI--------------------------------TWNTL 283
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL 290
I+GY + D+ E L LF +MG G + N TF S +AC L + C +++H +++ G
Sbjct: 284 IAGY-ERSDSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGF 342
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
N + + ++D+Y KC +++ + + R+ S ++M++GY G +EA + FD
Sbjct: 343 DKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDE 402
Query: 351 LTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHP 410
+ + G+ D ++ + +L C+ +
Sbjct: 403 MVQ--------------------------------SGIQPDRIVFMGVLCGCSHAGLVDK 430
Query: 411 G-KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMI-AC 467
G K + + + D+++ +VD+ + G + A + +N E D ++ ++ AC
Sbjct: 431 GLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGAC 490
Query: 468 YAH 470
A+
Sbjct: 491 KAY 493
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 151/357 (42%), Gaps = 38/357 (10%)
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFAS 264
+G A F PE D V+W +I G+ + +F M + V+ N T +S
Sbjct: 56 KGLTREACNLFNEIPE-RDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEVQPNAFTMSS 114
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY-CKCENMNYAESMLLLKGVR 323
L AC G++ + C HS K+G+ + +V + ++D+Y C M+ A S+
Sbjct: 115 VLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDALSV------- 167
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV-KAQNCEALFDLLSEF 382
F+ + K V WT L +G+ + L
Sbjct: 168 ------------------------FNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQML 203
Query: 383 VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGN 442
+ E V ++ I ACA ++ GK+IHA + + G+ D ++++++DMY +C
Sbjct: 204 L--EDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNY 261
Query: 443 MTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
+ A+ F E++L+ +N +IA Y E ++ LF +M +G KP+ TF +I +A
Sbjct: 262 LCDAKRCFGELTEKNLITWNTLIAGYERSDSSE-SLSLFFQMGSEGYKPNCFTFTSITAA 320
Query: 503 FRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE 559
+ + G++ + +ID+Y + + + + +P +
Sbjct: 321 CANLAVLSCGQQVHGGIVRR-GFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRD 376
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 108/257 (42%), Gaps = 68/257 (26%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H K GL N ++ +Y + N L ++++ F E+ E+N+ +WNT+I+ +S
Sbjct: 234 HAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGYERS--- 290
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
DSS ++L LF +M S E + + FT TS
Sbjct: 291 -------DSS-----------------------ESLSLFFQMGS--EGYKPNCFTFTSIT 318
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C L + G+Q+H +V+ D + ++SLIDMY+KC ++ ++F
Sbjct: 319 AACANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLF--------- 369
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
C G D VSW T++ GY +G +E +KLF M +
Sbjct: 370 ---------CDMPGR---------------DLVSWTTMMIGYGAHGYGKEAVKLFDEMVQ 405
Query: 253 NGVRWNEHTFASALSAC 269
+G++ + F L C
Sbjct: 406 SGIQPDRIVFMGVLCGC 422
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 101/218 (46%), Gaps = 3/218 (1%)
Query: 329 SSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGV 388
+++I Y +G EA F+ + E++VV WTA+ G+ + + + SE + E V
Sbjct: 47 TNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSE-V 105
Query: 389 VTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMY-SKCGNMTYAE 447
+A + +L AC AL G H+ + G+ + + L+DMY + C M A
Sbjct: 106 QPNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDAL 165
Query: 448 IIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCG 507
+F + + V + +IA + H G +L F +ML + + P++ +F A
Sbjct: 166 SVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASIS 225
Query: 508 SVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQL 545
S G++ ++T Y + + ++D+Y R N L
Sbjct: 226 SYSCGKQIHAAVT-KYGLHCDAPVMNSILDMYCRCNYL 262
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 56/127 (44%), Gaps = 2/127 (1%)
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+ L+ Y G A +F ERD+V + MI + H +A +F EML ++
Sbjct: 47 TNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEVQ 106
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRA-NQLEKAI 549
P+A T ++L A + ++ G +S+ + I ++D+Y + ++ A+
Sbjct: 107 PNAFTMSSVLKACKGMKALSCG-ALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDAL 165
Query: 550 EFMKSIP 556
IP
Sbjct: 166 SVFNDIP 172
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 201/695 (28%), Positives = 330/695 (47%), Gaps = 108/695 (15%)
Query: 18 KAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMP----ERNVFSWNTIISACIKSHDLK 73
+AG T++ N L+ Y K++ + K+F EM + N F ++ +++AC S DL+
Sbjct: 160 EAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLE 219
Query: 74 QARSL-----------------------------------FDSSPHKDLVTYNSMLCGYI 98
R + F P D+V++N+ + G +
Sbjct: 220 AGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCV 279
Query: 99 NAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDA 158
G++ AL+L ++M+S+ + + FT++S L C GRQ+H FMVK + D+
Sbjct: 280 -LHGHDQHALELLLQMKSSG--LVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADS 336
Query: 159 SGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQ 218
+ L+DMY+K ++A +VF+ +
Sbjct: 337 DNYIAFGLVDMYAKHGLLDDAKKVFDWIPQR----------------------------- 367
Query: 219 PELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCA 278
D V WN LISG E L LF RM + G N T A+ L + L +
Sbjct: 368 ----DLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDT 423
Query: 279 KEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQ 338
+++H+ K G +S+ V +G++D Y KC+ +NYA + G + + +SMI S
Sbjct: 424 RQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQC 483
Query: 339 GNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVIL 398
+ E+A + F + K G+ D +L L
Sbjct: 484 DHGEDAIKLFMEMLRK--------------------------------GLDPDPFVLSSL 511
Query: 399 LGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDL 458
L ACA +A GK++HA++++ D + LV Y+KCG++ A++ F E+ +
Sbjct: 512 LNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGV 571
Query: 459 VLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNS 518
V ++ MI A HGH ++A+ +F M+++ I P+ +T ++L A H G V+ ++YFNS
Sbjct: 572 VSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNS 631
Query: 519 MTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAE 578
M + I +HYACMIDL GRA +L+ A+E + S+P + +A + G+ L R++R+ E
Sbjct: 632 MKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRVHRDPE 691
Query: 579 LAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVE 638
L A EKL LE +V LAN YA+ G W ++ ++RK M+ K + SWV ++
Sbjct: 692 LGRLAAEKLFILEPEKSGTHVLLANTYASAGMWDDVAKVRKLMKDSKVKKEPAMSWVELK 751
Query: 639 HEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIAG 673
++H F VGD SHP+ IY+ L G+L AG
Sbjct: 752 DKVHTFIVGDKSHPRARDIYAKLDEL-GDLMTKAG 785
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 132/506 (26%), Positives = 223/506 (44%), Gaps = 106/506 (20%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMP-ERNVFSWNTIISACIKSHD 71
H A+ GL N L+ +Y + E+R +FDE ERN SWN ++SA +K+
Sbjct: 123 HALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKN-- 180
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
D H A+K+F EM ++ +EF +
Sbjct: 181 --------DRCSH----------------------AVKVFGEMVWGG--VQPNEFGFSCV 208
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
+N C ++ GR++HA +++T D F ++L+DMYSK A VF G E +
Sbjct: 209 VNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVF-GKVPETD 267
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
++S NA ++ C V +G + L+L ++M
Sbjct: 268 VVSWNAFISGC--------------------------------VLHGHDQHALELLLQMK 295
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
+G+ N T +S L AC G ++IH +++K S+ +++ G+VD+Y K
Sbjct: 296 SSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAK----- 350
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK-AQ 370
G +++A++ FD + ++++V+W AL SG AQ
Sbjct: 351 --------------------------HGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQ 384
Query: 371 NCEALFDLLSEF--VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK 428
+ EA LS F + KEG + L +L + A A+ +++HA ++G D
Sbjct: 385 HAEA----LSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSH 440
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
+++ L+D Y KC + YA +F+ D++ + MI + H E AI LF EML KG
Sbjct: 441 VVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKG 500
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEK 514
+ PD ++L+A + E G++
Sbjct: 501 LDPDPFVLSSLLNACASLSAYEQGKQ 526
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 182/439 (41%), Gaps = 93/439 (21%)
Query: 144 GRQLHAFMVKTSNDASGFAV--SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAA 201
G +HA ++K+ FAV + L+ YSKCR A RVF+ + +
Sbjct: 23 GAHIHAHLLKSGL----FAVFRNHLLSFYSKCRLPGSARRVFDEIPDPCH---------- 68
Query: 202 CCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHT 261
VSW++L++ Y N + L F M VR NE
Sbjct: 69 -----------------------VSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFV 105
Query: 262 FASALSACCGLRNVKCAK------EIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAES 315
L KCA ++H+ + GL + FV++ +V +Y
Sbjct: 106 LPVVL---------KCAPDAGFGTQLHALAMATGLGGDIFVANALVAMYG---------- 146
Query: 316 MLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT-EKNVVVWTALFSGYVKAQNCEA 374
G+ G ++EAR FD E+N V W L S YVK C
Sbjct: 147 ------------------GF---GFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSH 185
Query: 375 LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLV 434
+ E V GV + ++ AC L G+++HA ++R G D + LV
Sbjct: 186 AVKVFGEMVWG-GVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALV 244
Query: 435 DMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAV 494
DMYSK G++ A ++F E D+V +N I+ HGH++ A+ L +M G+ P+
Sbjct: 245 DMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVF 304
Query: 495 TFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC--MIDLYGRANQLEKAIEFM 552
T +IL A G+ +G + M K + ++D+Y ++D+Y + L+ A +
Sbjct: 305 TLSSILKACAGSGAFNLGRQIHGFMV---KANADSDNYIAFGLVDMYAKHGLLDDAKKVF 361
Query: 553 KSIPTEEDAVILGSFLNVC 571
IP + D V+ + ++ C
Sbjct: 362 DWIP-QRDLVLWNALISGC 379
Score = 39.3 bits (90), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 5/107 (4%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H IK N L++ Y+K + ++ F +PE+ V SW+ +I +
Sbjct: 528 HAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHG 587
Query: 73 KQARSLF----DSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQ 115
K+A +F D + +T S+LC N G +A + F M+
Sbjct: 588 KRALDVFHRMVDEHISPNHITMTSVLCA-CNHAGLVDEAKRYFNSMK 633
>gi|449508637|ref|XP_004163369.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Cucumis sativus]
Length = 594
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 181/593 (30%), Positives = 305/593 (51%), Gaps = 70/593 (11%)
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
++A +LF+ P +D+VT+ +M+ G+ + Y A +F EM ++ ++ + FT++S L
Sbjct: 60 REACNLFNEIPERDVVTWTAMIVGFTSCNHYH-QAWTMFSEMLRSE--VQPNAFTMSSVL 116
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYS-KCRCYEEACRVFEGCTEEVN 191
C + + G H+ K D S + ++L+DMY+ C ++A VF
Sbjct: 117 KACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDALSVFN------- 169
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
++ LKT AVSW TLI+G+ GD GL F +M
Sbjct: 170 -----------------DIPLKT---------AVSWTTLIAGFTHRGDGYSGLLAFRQML 203
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
V N +F+ A AC + + C K+IH+ V K GL + V + I+D+YC+C N
Sbjct: 204 LEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRC---N 260
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
Y + +A+R F LTEKN++ W L +GY ++ +
Sbjct: 261 Y----------------------------LCDAKRCFGELTEKNLITWNTLIAGYERSDS 292
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
E+L + EG + + ACA A L G+++H I+R G + LI+
Sbjct: 293 SESLSLFFQ--MGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVALIN 350
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
+L+DMY+KCG+++ + +F + RDLV + M+ Y HG+ ++A+ LF+EM++ GI+P
Sbjct: 351 SLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGIQP 410
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
D + F+ +L H G V+ G KYF SM DY I+P+ + Y C++DL GRA ++E+A +
Sbjct: 411 DRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAFQL 470
Query: 552 MKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNW 611
++++P E D + G+ L C+ + + L A +++L N Y+ L+ +YAAEG W
Sbjct: 471 VENMPFEPDESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAGTYLLLSKIYAAEGKW 530
Query: 612 AEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIF 664
E ++RK M+GM + G SW+ + +E++ F VG P ++ V+ +
Sbjct: 531 GEFAKMRKLMKGMNKKKEVGKSWIEIRNEVYSFVVGAKMGPHIEWVHKVIDVL 583
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/423 (21%), Positives = 182/423 (43%), Gaps = 75/423 (17%)
Query: 53 ERNVFSWNTIISACIKS-HDLKQARSLFDSSPHKDLVTYNSMLCGYIN-AEGYEADALKL 110
+R+V+ N ++ S + A S+F+ P K V++ +++ G+ + +GY L
Sbjct: 141 DRSVYVQNALLDMYAASCATMDDALSVFNDIPLKTAVSWTTLIAGFTHRGDGYSG----L 196
Query: 111 FIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMY 170
Q E + + F+ + C + + G+Q+HA + K ++S++DMY
Sbjct: 197 LAFRQMLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMY 256
Query: 171 SKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTL 230
+C +A R F TE+ NLI +WNTL
Sbjct: 257 CRCNYLCDAKRCFGELTEK-NLI--------------------------------TWNTL 283
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL 290
I+GY + D+ E L LF +MG G + N TF S +AC L + C +++H +++ G
Sbjct: 284 IAGY-ERSDSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGF 342
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
N + + ++D+Y KC +++ + + R+ S ++M++GY G +EA + FD
Sbjct: 343 DKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDE 402
Query: 351 LTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHP 410
+ + G+ D ++ + +L C+ +
Sbjct: 403 MVQ--------------------------------SGIQPDRIVFMGVLCGCSHAGLVDK 430
Query: 411 G-KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMI-AC 467
G K + + + D+++ +VD+ + G + A + +N E D ++ ++ AC
Sbjct: 431 GLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGAC 490
Query: 468 YAH 470
A+
Sbjct: 491 KAY 493
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 151/357 (42%), Gaps = 38/357 (10%)
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFAS 264
+G A F PE D V+W +I G+ + +F M + V+ N T +S
Sbjct: 56 KGLTREACNLFNEIPE-RDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEVQPNAFTMSS 114
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY-CKCENMNYAESMLLLKGVR 323
L AC G++ + C HS K+G+ + +V + ++D+Y C M+ A S+
Sbjct: 115 VLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDALSV------- 167
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV-KAQNCEALFDLLSEF 382
F+ + K V WT L +G+ + L
Sbjct: 168 ------------------------FNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQML 203
Query: 383 VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGN 442
+ E V ++ I ACA ++ GK+IHA + + G+ D ++++++DMY +C
Sbjct: 204 L--EDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNY 261
Query: 443 MTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
+ A+ F E++L+ +N +IA Y E ++ LF +M +G KP+ TF +I +A
Sbjct: 262 LCDAKRCFGELTEKNLITWNTLIAGYERSDSSE-SLSLFFQMGSEGYKPNCFTFTSITAA 320
Query: 503 FRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE 559
+ + G++ + +ID+Y + + + + +P +
Sbjct: 321 CANLAVLSCGQQVHGGIVRR-GFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRD 376
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 108/257 (42%), Gaps = 68/257 (26%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H K GL N ++ +Y + N L ++++ F E+ E+N+ +WNT+I+ +S
Sbjct: 234 HAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGYERS--- 290
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
DSS ++L LF +M S E + + FT TS
Sbjct: 291 -------DSS-----------------------ESLSLFFQMGS--EGYKPNCFTFTSIT 318
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C L + G+Q+H +V+ D + ++SLIDMY+KC ++ ++F
Sbjct: 319 AACANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLF--------- 369
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
C G D VSW T++ GY +G +E +KLF M +
Sbjct: 370 ---------CDMPGR---------------DLVSWTTMMIGYGAHGYGKEAVKLFDEMVQ 405
Query: 253 NGVRWNEHTFASALSAC 269
+G++ + F L C
Sbjct: 406 SGIQPDRIVFMGVLCGC 422
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 101/218 (46%), Gaps = 3/218 (1%)
Query: 329 SSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGV 388
+++I Y +G EA F+ + E++VV WTA+ G+ + + + SE + E V
Sbjct: 47 TNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSE-V 105
Query: 389 VTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMY-SKCGNMTYAE 447
+A + +L AC AL G H+ + G+ + + L+DMY + C M A
Sbjct: 106 QPNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDAL 165
Query: 448 IIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCG 507
+F + + V + +IA + H G +L F +ML + + P++ +F A
Sbjct: 166 SVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASIS 225
Query: 508 SVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQL 545
S G++ ++T Y + + ++D+Y R N L
Sbjct: 226 SYSCGKQIHAAVT-KYGLHCDAPVMNSILDMYCRCNYL 262
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 56/127 (44%), Gaps = 2/127 (1%)
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+ L+ Y G A +F ERD+V + MI + H +A +F EML ++
Sbjct: 47 TNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEVQ 106
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRA-NQLEKAI 549
P+A T ++L A + ++ G +S+ + I ++D+Y + ++ A+
Sbjct: 107 PNAFTMSSVLKACKGMKALSCG-ALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDAL 165
Query: 550 EFMKSIP 556
IP
Sbjct: 166 SVFNDIP 172
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 199/645 (30%), Positives = 334/645 (51%), Gaps = 88/645 (13%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLV 88
N ++ Y + + R++RKLFDEMP+RN+ SWN ++S +K+ ++ +AR +FD P +++V
Sbjct: 52 NSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVV 111
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLH 148
++ +++ GY++ G A LF +M ++ V+ T+ L
Sbjct: 112 SWTALVKGYVH-NGKVDVAESLFWKMPEKNK--------VSWTVMLI------------- 149
Query: 149 AFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEM 208
GF ID +AC+++E ++ N I++ +M+ C+EG +
Sbjct: 150 -----------GFLQDGRID---------DACKLYEMIPDKDN-IARTSMIHGLCKEGRV 188
Query: 209 EMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSA 268
+ A + F E ++W T+++GY QN ++ K+F M E E ++ S L
Sbjct: 189 DEAREIFDEMSE-RSVITWTTMVTGYGQNNRVDDARKIFDVMPEK----TEVSWTSMLMG 243
Query: 269 CCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSI 328
++NG I + AE + + V+ +
Sbjct: 244 ----------------YVQNGRIED-------------------AEELFEVMPVKPVIAC 268
Query: 329 SSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK-AQNCEALFDLLSEFVTKEG 387
++MI G +G + +ARR FDS+ E+N W + + + EAL DL + K+G
Sbjct: 269 NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEAL-DLFI-LMQKQG 326
Query: 388 VVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAE 447
V L+ +L CA A+LH GK++HA ++R +D + S L+ MY KCG + ++
Sbjct: 327 VRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSK 386
Query: 448 IIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM-LEKGIKPDAVTFVAILSAFRHC 506
+IF F +D++++N +I+ YA HG E+A+ +F EM L KP+ VTFVA LSA +
Sbjct: 387 LIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYA 446
Query: 507 GSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGS 566
G VE G K + SM + + + P T HYACM+D+ GRA + +A+E + S+ E DA + GS
Sbjct: 447 GMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGS 506
Query: 567 FLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKG 626
L CR + ++A +KL+ +E N Y+ L+N+YA++G WA++ +RK M+
Sbjct: 507 LLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLV 566
Query: 627 NRFAGCSWVYVEHEIHIFTVGDV-SHPKTNAIYSVLAIFTGELYE 670
+ GCSW VE+++H FT G + SHP+ +I +L G L E
Sbjct: 567 RKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLRE 611
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 115/478 (24%), Positives = 207/478 (43%), Gaps = 76/478 (15%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
I+ N L+ Y K+ + E+RK+FD MPERNV SW ++ + + + A SLF P K
Sbjct: 80 ISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK 139
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR 145
+ V++ ML G++ +G DA KL+ + D R TS ++ K V R
Sbjct: 140 NKVSWTVMLIGFLQ-DGRIDDACKLYEMIPDKDNIAR------TSMIHGLCKEGRVDEAR 192
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN-------------- 191
++ M ++ S ++++ Y + ++A ++F+ E+
Sbjct: 193 EIFDEM----SERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNG 248
Query: 192 ----------------LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYV 235
+I+ NAM++ ++GE+ A + F E NDA SW T+I +
Sbjct: 249 RIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDA-SWQTVIKIHE 307
Query: 236 QNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF 295
+NG E L LF+ M + GVR T S LS C L ++ K++H+ +++ + +
Sbjct: 308 RNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVY 367
Query: 296 VSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKN 355
V+S ++ +Y KC G + +++ FD K+
Sbjct: 368 VASVLMTMYIKC-------------------------------GELVKSKLIFDRFPSKD 396
Query: 356 VVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIH 415
+++W ++ SGY E + E + + V L AC+ + G +I+
Sbjct: 397 IIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIY 456
Query: 416 AYILRM-GVQMDKKLISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMI-ACYAH 470
+ + GV+ + +VDM + G A E+I +E D ++ ++ AC H
Sbjct: 457 ESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTH 514
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 155/373 (41%), Gaps = 99/373 (26%)
Query: 24 TTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP 83
+ IT ++ Y ++N + ++RK+FD MPE+ SW +++ +++ ++ A LF+ P
Sbjct: 202 SVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMP 261
Query: 84 HKDLVTYNSMLCGYINA------------------------------EGYEADALKLFIE 113
K ++ N+M+ G G+E +AL LFI
Sbjct: 262 VKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFIL 321
Query: 114 MQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKC 173
MQ + +R T+ S L++C L ++ G+Q+HA +V+ D + S L+ MY KC
Sbjct: 322 MQK--QGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKC 379
Query: 174 RCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISG 233
GE+ + F R P D + WN++ISG
Sbjct: 380 --------------------------------GELVKSKLIFDRFPS-KDIIMWNSIISG 406
Query: 234 YVQNGDAEEGLKLFVRMGENG-VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
Y +G EE LK+F M +G + NE TF + LSAC
Sbjct: 407 YASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACS---------------------- 444
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRN-SFSISSMIVGYSLQGNMEEARRHFDSL 351
+G+V+ E + ESM + GV+ + + M+ G EA DS+
Sbjct: 445 ----YAGMVE-----EGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSM 495
Query: 352 T-EKNVVVWTALF 363
T E + VW +L
Sbjct: 496 TVEPDAAVWGSLL 508
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 86/409 (21%), Positives = 176/409 (43%), Gaps = 55/409 (13%)
Query: 194 SKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE- 252
+ N + R G++ A K F + SWN++++GY N + KLF M +
Sbjct: 19 TANVRITHLSRIGKIHEARKLF-DSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDR 77
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS-----NPFVSSGIVDV---- 303
N + WN +S + A+++ + + ++S +V +G VDV
Sbjct: 78 NIISWN-----GLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESL 132
Query: 304 YCKCENMNYAESMLLLKGV------------------RNSFSISSMIVGYSLQGNMEEAR 345
+ K N ++L G +++ + +SMI G +G ++EAR
Sbjct: 133 FWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAR 192
Query: 346 RHFDSLTEKNVVVWTALFSGYV---KAQNCEALFDLLSEFVTKEGVVTDALILVILLGAC 402
FD ++E++V+ WT + +GY + + +FD++ E T+ +L+G
Sbjct: 193 EIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPE-------KTEVSWTSMLMGYV 245
Query: 403 ALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYN 462
+ +E+ + V +IS L + G + A +F + ER+ +
Sbjct: 246 Q-NGRIEDAEELFEVMPVKPVIACNAMISGL----GQKGEIAKARRVFDSMKERNDASWQ 300
Query: 463 VMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTAD 522
+I + +G E +A+ LF M ++G++P T ++ILS S+ G++ +
Sbjct: 301 TVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLV-- 358
Query: 523 YKISPETDHY--ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLN 569
+ + D Y + ++ +Y + +L K+ P+ +D ++ S ++
Sbjct: 359 -RCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPS-KDIIMWNSIIS 405
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 82/206 (39%), Gaps = 46/206 (22%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H Q ++ + + L+ +Y K L +S+ +FD P +++ WN+IIS
Sbjct: 354 HAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIIS-------- 405
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
GY + G +ALK+F EM + + +E T +TL
Sbjct: 406 -----------------------GYA-SHGLGEEALKVFCEMPLSGS-TKPNEVTFVATL 440
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS-------LIDMYSKCRCYEEACRVFEG 185
+ C V G +++ M S F V ++DM + + EA + +
Sbjct: 441 SACSYAGMVEEGLKIYESM------ESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDS 494
Query: 186 CTEEVNLISKNAMVAACCREGEMEMA 211
T E + +++ AC ++++A
Sbjct: 495 MTVEPDAAVWGSLLGACRTHSQLDVA 520
>gi|297744236|emb|CBI37206.3| unnamed protein product [Vitis vinifera]
Length = 664
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 218/700 (31%), Positives = 343/700 (49%), Gaps = 96/700 (13%)
Query: 4 LNLKEALIC---HVQAIKAGLTLT-------TITTNQLIHIYSKHNLLRESRKLFDEMPE 53
+L L C HV K + L+ +Q++ S+ L RE+R + DEMP
Sbjct: 11 FSLSSNLYCRRFHVHRFKPQIPLSGTHYSKLRFDDSQILECLSQQRL-REARHMLDEMPN 69
Query: 54 RNVFS----WNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALK 109
R V W +++S K+ + +AR+LF+ P +++VTYN+ML GY+ G +DA +
Sbjct: 70 RGVLDRVVCWTSLLSKFSKNGFIDEARALFEIMPERNVVTYNAMLSGYVQC-GRLSDACR 128
Query: 110 LFIEMQSADEHIRMDEFTVTSTLNLCVKLLN---VGFGRQLHAFMVKTSNDASGFAVSSL 166
F E M E V S +L L N +G R+L M
Sbjct: 129 FFEE---------MPERNVVSWTSLLCGLANAGRIGEARELFNVM--------------- 164
Query: 167 IDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVS 226
E N++S N+M+ R G++E A + F P + VS
Sbjct: 165 ---------------------PERNVVSWNSMLVGLIRSGQLEEARRVFNEMP-VKSQVS 202
Query: 227 WNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVK---------C 277
WN +I+GY ++ EE LF MG+ V T+ S +S C NV+
Sbjct: 203 WNVMIAGYAEHSRMEEARVLFDGMGDRNVV----TWTSMISGYCRAGNVQEGYCLFQKMP 258
Query: 278 AKEIHSWV-LKNGLISNPFVSSGI-------------VDVYCKCENMNYAESMLLLKGVR 323
+ + SW + G N F + ++ Y + + A+S+ VR
Sbjct: 259 ERNVVSWTAMIGGFAWNGFYKEALNSMSYNTQSCNSMINGYIRIGQLEKAQSLFDTIPVR 318
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV 383
+ S +SMI GY G + +A F+++ +++ V WT + SG+V+ + L SE
Sbjct: 319 DKISWTSMINGYFNVGQIAKACYLFNNMPDRDAVAWTVMVSGHVQNELFAEATYLFSEMR 378
Query: 384 TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNM 443
K GV ILLGA A L G++ H +++ + D L ++L+ MY+KCG +
Sbjct: 379 VK-GVSPLNSTFSILLGAAGAMAYLDQGRQFHCLLMKTQFEFDLILQNSLISMYAKCGEI 437
Query: 444 TYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAF 503
A IF I RDL+ +N MI ++HHG +A+ +FE ML G P++VTF+ ILSA
Sbjct: 438 GDAYSIFSKMISRDLISWNSMIMGFSHHGLTSEALKVFEAMLTSGTHPNSVTFLGILSAC 497
Query: 504 RHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVI 563
H G + G + F++M+ + I P+ +HY CM++L GRA ++E+A EF+ +P E D I
Sbjct: 498 SHAGLLNQGWELFDAMSDVFAIQPQLEHYVCMVNLLGRAGKVEEAEEFISKLPFEPDLTI 557
Query: 564 LGSFLNVCRLNR-NAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMR 622
G+ L VC N +A A ++LL L+ N +V L N++A+ G AE G++RK+M
Sbjct: 558 WGALLGVCGFGMINTGVARRAAKRLLELDPLNAPAHVVLCNIHASIGQRAEEGQLRKEM- 616
Query: 623 GMKGNR-FAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
G+KG R GCSW+ ++ E ++F GD HP+ + + S+L
Sbjct: 617 GLKGVRKVPGCSWILLKGEPYVFLSGDRIHPQADEMLSLL 656
>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 733
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 195/658 (29%), Positives = 319/658 (48%), Gaps = 99/658 (15%)
Query: 11 ICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSH 70
+ H ++K+GL + ++ LI +Y K + + ++F++M RNV SW II+
Sbjct: 145 LLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTRNVVSWTAIIA------ 198
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
G ++A GY + L F EM + + D T
Sbjct: 199 -------------------------GLVHA-GYNMEGLLYFSEMWRSK--VGYDSHTFAI 230
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L + G+ +H +K D S F +++L MY+KC + R+FE
Sbjct: 231 ALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKM---- 286
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
R P D VSW TLIS YVQ G+ E ++ F RM
Sbjct: 287 --------------------------RMP---DVVSWTTLISTYVQMGEEEHAVEAFKRM 317
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
++ V N++TFA+ +S+C L K ++IH VL+ GL++ V++ I+ +Y KC
Sbjct: 318 RKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKC--- 374
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
G ++ A F +T K+++ W+ + S Y +
Sbjct: 375 ----------------------------GLLKSASLVFHGITRKDIISWSTIISVYSQGG 406
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
+ FD LS ++ +EG + L +L C A L GK++HA++L +G+ + +
Sbjct: 407 YAKEAFDYLS-WMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVH 465
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
S ++ MYSKCG++ A IF D++ + MI YA HG+ ++AI LFE++ G+K
Sbjct: 466 SAIISMYSKCGSVQEASKIFNGMKINDIISWTAMINGYAEHGYSQEAINLFEKISSVGLK 525
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
PD V F+ +L+A H G V++G YF MT Y+ISP +HY C+IDL RA +L +A
Sbjct: 526 PDYVMFIGVLTACNHAGMVDLGFYYFMLMTNVYRISPSKEHYGCLIDLLCRAGRLSEAEH 585
Query: 551 FMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGN 610
++S+P D V+ + L CR++ + + E+LL+L+ N+ ++ LAN+YAA+G
Sbjct: 586 IIRSMPFHTDDVVWSTLLRACRVHGDVDRGRWTAEQLLQLDPNSAGTHITLANIYAAKGR 645
Query: 611 WAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
W E IRK M+ + G SWV V +++ F GD +HP++ I +VL + + +
Sbjct: 646 WKEAAHIRKLMKSKGVIKERGWSWVNVNDQLNAFVAGDQAHPQSEHITTVLKLLSANI 703
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 148/572 (25%), Positives = 241/572 (42%), Gaps = 118/572 (20%)
Query: 45 RKLFDEMPERNVFS------WNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYI 98
++ E P N +S N+ + +K L +AR +FD H+D +++ +++ GY+
Sbjct: 40 QQPIQEQPAENAYSVHNMLELNSELKQLVKQGQLCKARYMFDKMTHRDEISWTTLIAGYV 99
Query: 99 NA-EGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSND 157
NA + YEA L LF M R D+F ++ L C +N+ FG LH F VK+
Sbjct: 100 NASDSYEA--LILFSNMWVHPGPQR-DQFMISVALKACALGVNICFGELLHGFSVKSGLI 156
Query: 158 ASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWR 217
S F S+LIDMY K E+ CRVFE ++++N
Sbjct: 157 HSVFVSSALIDMYMKVGKIEQGCRVFE------KMMTRN--------------------- 189
Query: 218 QPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKC 277
VSW +I+G V G EGL F M + V ++ HTFA AL A +
Sbjct: 190 ------VVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHH 243
Query: 278 AKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSL 337
K IH+ +K G + FV + + +Y KC +Y
Sbjct: 244 GKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDY------------------------- 278
Query: 338 QGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVI 397
R F+ + +VV WT L S YV+ E + + K V +
Sbjct: 279 ------VMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKR-MRKSYVSPNKYTFAA 331
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD 457
++ +CA AA G++IH ++LR+G+ + ++++ +YSKCG + A ++F +D
Sbjct: 332 VISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGITRKD 391
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP-------------------------- 491
++ ++ +I+ Y+ G+ ++A M +G KP
Sbjct: 392 IISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHA 451
Query: 492 ---------DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRA 542
+A+ AI+S + CGSV+ K FN M + IS + MI+ Y
Sbjct: 452 HLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDIIS-----WTAMINGYAEH 506
Query: 543 NQLEKAI---EFMKSIPTEEDAVILGSFLNVC 571
++AI E + S+ + D V+ L C
Sbjct: 507 GYSQEAINLFEKISSVGLKPDYVMFIGVLTAC 538
>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 959
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 200/599 (33%), Positives = 301/599 (50%), Gaps = 68/599 (11%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
NTII+ K +L AR +FD P D VT+N ++ GY+ G+ +A+ LF M ++
Sbjct: 317 NTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQ-NGFTDEAVALFKAMVTSG- 374
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
+++D T S L +K ++ + +++H+++V+ + S+L+D+Y
Sbjct: 375 -VKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIY--------- 424
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
F+G G++EMA KTF +Q L D +ISGYV NG
Sbjct: 425 ---FKG--------------------GDVEMACKTF-QQNTLVDVAVCTAMISGYVLNGL 460
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
E L LF + + G+ N T AS L AC L ++K KE+H +LK GL + V S
Sbjct: 461 NVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSS 520
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
I +Y K G ++ A + F + K+ V W
Sbjct: 521 ITYMYAK-------------------------------SGRLDLAYQFFRRMPVKDSVCW 549
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
+ + + E DL + T G D++ L L ACA AL+ GKE+H +++
Sbjct: 550 NLMIVSFSQNGKPELAIDLFRQMGT-SGTKFDSVSLSATLSACANYPALYYGKELHCFVV 608
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
R D + STL+DMYSKCG + A +F ++ V +N +IA Y +HG + +
Sbjct: 609 RNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLD 668
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
LF EM+E GI+PD VTF+ I+SA H G V+ G YF MT +Y I +H+ACM+DLY
Sbjct: 669 LFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICARMEHFACMVDLY 728
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYV 599
GRA +L +A + +KS+P DA GS L CRL+ N ELA A + L+ L+ NN YV
Sbjct: 729 GRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNVELAKLASKHLVELDPNNSGYYV 788
Query: 600 QLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
L+NV+A G W + ++R M+ + G SW+ V H+F+ D HP++ IY
Sbjct: 789 LLSNVHAGAGEWESVLKVRSLMKEKGVQKIPGYSWIDVNGGTHMFSAADGCHPQSVEIY 847
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 147/545 (26%), Positives = 253/545 (46%), Gaps = 102/545 (18%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
N+ + H A G + + LI +Y+ + + +++ LFDE+P R+ WN +++
Sbjct: 192 NVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLN 251
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
+K+ D +NS AL F EM+ + ++ +
Sbjct: 252 GYVKNGD------------------FNS--------------ALGTFQEMR--NSCVKPN 277
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
+ L++C V G QLH ++++ ++ +++I MYSKC
Sbjct: 278 SVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKC----------- 326
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
G + A K F P+ D V+WN LI+GYVQNG +E +
Sbjct: 327 ---------------------GNLFDARKIFDIMPQ-TDTVTWNGLIAGYVQNGFTDEAV 364
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
LF M +GV+ + TFAS L + ++K KE+HS+++++G+ + ++ S +VD+Y
Sbjct: 365 ALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIY 424
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
K G++E A + F T +V V TA+ S
Sbjct: 425 FK-------------------------------GGDVEMACKTFQQNTLVDVAVCTAMIS 453
Query: 365 GYV-KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
GYV N EAL L ++ +EG+V + L + +L ACA A+L GKE+H IL+ G+
Sbjct: 454 GYVLNGLNVEALN--LFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGL 511
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
+ ++ S++ MY+K G + A F+ +D V +N+MI ++ +G E AI LF +
Sbjct: 512 ENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQ 571
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRAN 543
M G K D+V+ A LSA + ++ G++ + + IS +T + +ID+Y +
Sbjct: 572 MGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFIS-DTFVASTLIDMYSKCG 630
Query: 544 QLEKA 548
+L A
Sbjct: 631 KLALA 635
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 125/515 (24%), Positives = 221/515 (42%), Gaps = 85/515 (16%)
Query: 107 ALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSL 166
AL F M ++ + D++T + C L NV + +H F SSL
Sbjct: 161 ALMFFFRMLGSN--VAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGSSL 218
Query: 167 IDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVS 226
I +Y+ +A +F+ E+ ++ D +
Sbjct: 219 IKLYTDNGYIHDAKYLFD------------------------ELPVR---------DCIL 245
Query: 227 WNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVL 286
WN +++GYV+NGD L F M + V+ N +F LS C V+ ++H V+
Sbjct: 246 WNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVI 305
Query: 287 KNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARR 346
++G S+P V++ I+ +Y KC GN+ +AR+
Sbjct: 306 RSGFESDPTVANTIITMYSKC-------------------------------GNLFDARK 334
Query: 347 HFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQA 406
FD + + + V W L +GYV+ + L VT GV D++ L +
Sbjct: 335 IFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVT-SGVKLDSITFASFLPSVLKSG 393
Query: 407 ALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIA 466
+L KE+H+YI+R GV D L S LVD+Y K G++ A FQ D+ + MI+
Sbjct: 394 SLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMIS 453
Query: 467 CYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKIS 526
Y +G +A+ LF ++++G+ P+ +T ++L A S+++G++ + D I
Sbjct: 454 GYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKE----LHCD--IL 507
Query: 527 PETDHYACMID-----LYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAG 581
+ C + +Y ++ +L+ A +F + +P +D+V + N ELA
Sbjct: 508 KKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPV-KDSVCWNLMIVSFSQNGKPELAI 566
Query: 582 EAEEKLLRLEGNNKARY--VQLANVYAAEGNWAEM 614
+ L R G + ++ V L+ +A N+ +
Sbjct: 567 D----LFRQMGTSGTKFDSVSLSATLSACANYPAL 597
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 176/404 (43%), Gaps = 66/404 (16%)
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
RQ+HA ++ + S S ++ MY CR +++ +F CR
Sbjct: 96 RQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLF-------------------CR 136
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFAS 264
+L ++ WN LI G+ G + L F RM + V +++TF
Sbjct: 137 L--------------QLCYSLPWNWLIRGFSMLGCFDFALMFFFRMLGSNVAPDKYTFPY 182
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
+ AC GL NV K +H G + F+ S ++ +Y
Sbjct: 183 VIKACGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKLYTD------------------ 224
Query: 325 SFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVT 384
G + +A+ FD L ++ ++W + +GYVK + + E +
Sbjct: 225 -------------NGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQE-MR 270
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
V +++ V LL CA + + G ++H ++R G + D + +T++ MYSKCGN+
Sbjct: 271 NSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLF 330
Query: 445 YAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR 504
A IF + D V +N +IA Y +G ++A+ LF+ M+ G+K D++TF + L +
Sbjct: 331 DARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVL 390
Query: 505 HCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
GS++ K +S + + + + ++D+Y + +E A
Sbjct: 391 KSGSLKYC-KEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMA 433
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 108/248 (43%), Gaps = 11/248 (4%)
Query: 317 LLLKGVRNSFSISSMIVG-YSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEAL 375
+L+ G+ S ++ S ++G Y L + ++ F L + W L G+ +
Sbjct: 102 VLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGF----SMLGC 157
Query: 376 FDLLSEFVTK---EGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
FD F + V D ++ AC + K +H MG MD + S+
Sbjct: 158 FDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGSS 217
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
L+ +Y+ G + A+ +F RD +L+NVM+ Y +G A+ F+EM +KP+
Sbjct: 218 LIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPN 277
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFN-SMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
+V+FV +LS G V G + + + ++ P + +I +Y + L A +
Sbjct: 278 SVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVAN--TIITMYSKCGNLFDARKI 335
Query: 552 MKSIPTEE 559
+P +
Sbjct: 336 FDIMPQTD 343
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 198/613 (32%), Positives = 307/613 (50%), Gaps = 72/613 (11%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
E +V N +I+ +K D+ AR +FD P +D +++N+M+ GY + + L+LF
Sbjct: 227 ESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFEND-VCLEGLRLFF 285
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
M+ + + D T+TS ++ C L + GR++H +++KT A +SLI M+S
Sbjct: 286 MMR--EFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSS 343
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C++EA VF + E D VSW +IS
Sbjct: 344 VGCWDEAEMVFS---------------------------------KMEFKDLVSWTAMIS 370
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
GY +NG E+ ++ + M GV +E T AS LSAC GL + +H + + GL S
Sbjct: 371 GYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTS 430
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
V++ ++D+Y KC ++ A + F +
Sbjct: 431 YVIVANSLIDMYSKCRCIDKALEV-------------------------------FHRIP 459
Query: 353 EKNVVVWTALFSGY-VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG 411
KNV+ WT++ G + ++ EALF ++ + +++ LV +L ACA AL G
Sbjct: 460 NKNVISWTSIILGLRLNYRSFEALFFFQQMILS---LKPNSVTLVSVLSACARIGALSCG 516
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
KEIHA+ LR G+ D L + L+DMY +CG M A F N E+D+ +N+++ YA
Sbjct: 517 KEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQF-NSCEKDVASWNILLTGYAQQ 575
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH 531
G A+ LF +M+E + PD +TF ++L A G V G +YF SM + I+P H
Sbjct: 576 GKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKH 635
Query: 532 YACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLE 591
YA ++DL GRA +LE A EF+K +P + D I G+ LN CR+ +N EL A + + ++
Sbjct: 636 YASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMD 695
Query: 592 GNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSH 651
+ Y+ L N+YA G W E+ R+RK MR + GCSWV V ++H F GD H
Sbjct: 696 TKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFH 755
Query: 652 PKTNAIYSVLAIF 664
P+ I +VL F
Sbjct: 756 PQIKEINAVLEGF 768
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 129/489 (26%), Positives = 222/489 (45%), Gaps = 70/489 (14%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N ++S ++ DL +A +F +DL ++N ++ GY A GY +AL L+ M
Sbjct: 133 NALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKA-GYFDEALNLYHRMLWVG- 190
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
IR D +T L C L ++ GR++H +++ ++ V++LI MY KC
Sbjct: 191 -IRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKC------ 243
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
G++ A F R P D +SWN +ISGY +N
Sbjct: 244 --------------------------GDIFSARLVFDRMPR-RDRISWNAMISGYFENDV 276
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
EGL+LF M E V + T S +SAC L + + +E+H +V+K G ++ V+
Sbjct: 277 CLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVN-- 334
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
+S+I +S G +EA F + K++V W
Sbjct: 335 -----------------------------NSLIQMHSSVGCWDEAEMVFSKMEFKDLVSW 365
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
TA+ SGY K E + + + EGVV D + + +L ACA L G +H +
Sbjct: 366 TAMISGYEKNGLPEKAVETYT-IMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFAD 424
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
R G+ + ++L+DMYSKC + A +F ++++ + +I + +A+
Sbjct: 425 RTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALF 484
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
F++M+ +KP++VT V++LSA G++ G K ++ + + ++D+Y
Sbjct: 485 FFQQMI-LSLKPNSVTLVSVLSACARIGALSCG-KEIHAHALRTGLGFDGFLPNALLDMY 542
Query: 540 GRANQLEKA 548
R ++E A
Sbjct: 543 VRCGRMEPA 551
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 112/458 (24%), Positives = 178/458 (38%), Gaps = 104/458 (22%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H IK G N LI ++S E+ +F +M +++ SW +IS K
Sbjct: 319 HGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEK---- 374
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+ P K + TY M E + DE T+ S L
Sbjct: 375 -------NGLPEKAVETYTIM-----------------------EHEGVVPDEITIASVL 404
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C L + G LH F +T + +SLIDMYSKCRC ++A VF
Sbjct: 405 SACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFH-------- 456
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
R P N +SW ++I G N + E L F +M
Sbjct: 457 ------------------------RIPNKN-VISWTSIILGLRLNYRSFEALFFFQQMIL 491
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+ ++ N T S LSAC + + C KEIH+ L+ GL + F+ + ++D+Y +C
Sbjct: 492 S-LKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRC----- 545
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G ME A F+S EK+V W L +GY +
Sbjct: 546 --------------------------GRMEPAWNQFNS-CEKDVASWNILLTGYAQQGKG 578
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE-IHAYILRMGVQMDKKLIS 431
+L + + + V D + LL AC+ + G E + + + + K +
Sbjct: 579 GLAVELFHKMIESD-VNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYA 637
Query: 432 TLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMI-AC 467
++VD+ + G + A E I + I+ D ++ ++ AC
Sbjct: 638 SVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNAC 675
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 110/264 (41%), Gaps = 69/264 (26%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L + ++ H A + GLT I N LI +YSK + ++ ++F +P +NV SW +II
Sbjct: 413 LDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSII-- 470
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
L +N +E AL F +M + ++ +
Sbjct: 471 ----------------------------LGLRLNYRSFE--ALFFFQQMILS---LKPNS 497
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
T+ S L+ C ++ + G+++HA ++T GF ++L+DMY +C E A F
Sbjct: 498 VTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNS 557
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
C + D SWN L++GY Q G ++
Sbjct: 558 CEK----------------------------------DVASWNILLTGYAQQGKGGLAVE 583
Query: 246 LFVRMGENGVRWNEHTFASALSAC 269
LF +M E+ V +E TF S L AC
Sbjct: 584 LFHKMIESDVNPDEITFTSLLCAC 607
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 108/250 (43%), Gaps = 42/250 (16%)
Query: 329 SSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGV 388
+S+I+ L+G++E+A H DS+ E V V +
Sbjct: 63 NSLILELCLKGDLEKALIHLDSMQELQVSVEEETY------------------------- 97
Query: 389 VTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEI 448
+ LL C + A G +H+Y+ + ++ +L + L+ M+ + G++ A
Sbjct: 98 -------IALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWY 150
Query: 449 IFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGS 508
+F ERDL +NV++ YA G+ ++A+ L+ ML GI+PD TF +L R CG
Sbjct: 151 VFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVL---RTCGG 207
Query: 509 VE--MGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE----DAV 562
+ + + Y + D +I +Y + + A +P + +A+
Sbjct: 208 LPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAM 267
Query: 563 ILGSFLN-VC 571
I G F N VC
Sbjct: 268 ISGYFENDVC 277
>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 315 bits (807), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 205/656 (31%), Positives = 315/656 (48%), Gaps = 99/656 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A+ GL L + N L+ +YSK L+ +RKLFD +P+ ++ SWN IIS
Sbjct: 182 HGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIIS-------- 233
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
GY+ G +A LF M SA I+ D T S L
Sbjct: 234 -----------------------GYVQ-NGLMGEAEHLFRGMISAG--IKPDSITFASFL 267
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+LL++ +++H ++++ + F S+LID+Y KCR
Sbjct: 268 PCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCR------------------ 309
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
++EMA K + D V T+ISGYV NG +E L+ F + +
Sbjct: 310 --------------DVEMAQKNLCQSSSF-DTVVCTTMISGYVLNGKNKEALEAFRWLVQ 354
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
++ TF+S A GL + KE+H ++K L V S I+D+Y KC
Sbjct: 355 ERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKC----- 409
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G ++ A R F+ +TEK+ + W ++ + +
Sbjct: 410 --------------------------GRLDLACRVFNRITEKDAICWNSMITSCSQNGRP 443
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
+L + + EG D + + L ACA ALH GKEIH +++ ++ D S+
Sbjct: 444 GEAINLFRQ-MGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESS 502
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
L+DMY+KCGN+ ++ +F E++ V +N +I+ Y +HG ++ + LF EML GI+PD
Sbjct: 503 LIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPD 562
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
VTF+ I+SA H G V+ G +Y++ MT +Y I +HYAC+ D++GRA +L +A E +
Sbjct: 563 HVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHEAFETI 622
Query: 553 KSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWA 612
S+P DA + G+ L C ++ N ELA A + L L+ N YV LANV A G W
Sbjct: 623 NSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWR 682
Query: 613 EMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
++ ++R M+ + G SW+ V + H+F D SHP T IYSVL EL
Sbjct: 683 KVLKVRSIMKERGVRKVPGYSWIEVNNATHMFVAADGSHPLTAQIYSVLDSLLLEL 738
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 136/495 (27%), Positives = 231/495 (46%), Gaps = 73/495 (14%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
+ +VF +++I ++ L A+ LFD+ P KD V +N ML GY+ G +A+K+F+
Sbjct: 90 KEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVK-NGDSGNAIKIFL 148
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
EM+ ++ I+ + T L++C + G QLH V + ++L+ MYSK
Sbjct: 149 EMRHSE--IKPNSVTFACVLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYSK 206
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C+C + A ++F+ + +D VSWN +IS
Sbjct: 207 CQCLQAARKLFDTLPQ---------------------------------SDLVSWNGIIS 233
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
GYVQNG E LF M G++ + TFAS L L ++K KEIH +++++ ++
Sbjct: 234 GYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVL 293
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
+ F+ S ++D+Y KC ++ A+ L ++ ++MI GY L G +EA F L
Sbjct: 294 DVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLV 353
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
++ + + FS + A A AAL+ GK
Sbjct: 354 QERMKPTSVTFSS--------------------------------IFPAFAGLAALNLGK 381
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
E+H I++ + + S ++DMY+KCG + A +F E+D + +N MI + +G
Sbjct: 382 ELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNG 441
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
+AI LF +M +G + D V+ LSA + ++ G++ M K +D Y
Sbjct: 442 RPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMI---KGPLRSDLY 498
Query: 533 A--CMIDLYGRANQL 545
A +ID+Y + L
Sbjct: 499 AESSLIDMYAKCGNL 513
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 131/535 (24%), Positives = 231/535 (43%), Gaps = 80/535 (14%)
Query: 67 IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEF 126
+++ LK A++LF + +N M+ G+ G AL +++M A + D++
Sbjct: 3 VRTGSLKDAKNLFYTLQLGCTSAWNWMIRGF-TMMGQFNYALLFYLKMLGAG--VSPDKY 59
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
T + C L +V G+ +H + F SSLI +Y++
Sbjct: 60 TFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAE-------------- 105
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
G + A F P+ D+V WN +++GYV+NGD+ +K+
Sbjct: 106 ------------------NGHLSDAQYLFDNIPQ-KDSVLWNVMLNGYVKNGDSGNAIKI 146
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
F+ M + ++ N TFA LS C + ++H + GL + V++ ++ +Y K
Sbjct: 147 FLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYSK 206
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
C+ ++ AR+ FD+L + ++V W + SGY
Sbjct: 207 CQ-------------------------------CLQAARKLFDTLPQSDLVSWNGIISGY 235
Query: 367 VK---AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
V+ E LF + G+ D++ L +L KEIH YI+R V
Sbjct: 236 VQNGLMGEAEHLF----RGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAV 291
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
+D L S L+D+Y KC ++ A+ D V+ MI+ Y +G ++A+ F
Sbjct: 292 VLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRW 351
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRAN 543
++++ +KP +VTF +I AF ++ +G++ S+ K+ + + ++D+Y +
Sbjct: 352 LVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKT-KLDEKCHVGSAILDMYAKCG 410
Query: 544 QLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARY 598
+L+ A I TE+DA+ S + C N GEA L R G RY
Sbjct: 411 RLDLACRVFNRI-TEKDAICWNSMITSCSQNGR---PGEAIN-LFRQMGMEGTRY 460
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 116/269 (43%), Gaps = 69/269 (25%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
+ +LNL + L H IK L + ++ +Y+K L + ++F+ + E++ WN
Sbjct: 374 LAALNLGKEL--HGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWN 431
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
++I++C + G +A+ LF +M E
Sbjct: 432 SMITSC--------------------------------SQNGRPGEAINLFRQM--GMEG 457
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
R D +++ L+ C L + +G+++H M+K + +A SSLIDMY+KC
Sbjct: 458 TRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKC------- 510
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
G + + + F R E N+ VSWN++IS Y +GD
Sbjct: 511 -------------------------GNLNFSRRVFDRMQEKNE-VSWNSIISAYGNHGDL 544
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSAC 269
+E L LF M NG++ + TF +SAC
Sbjct: 545 KECLALFHEMLRNGIQPDHVTFLGIISAC 573
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 121/255 (47%), Gaps = 16/255 (6%)
Query: 335 YSLQGNMEEARRHFDSLTEKNVVVWTALFSGY-VKAQNCEALFDLLSEFVTKEGVVTDAL 393
Y G++++A+ F +L W + G+ + Q AL L + GV D
Sbjct: 2 YVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLK--MLGAGVSPDKY 59
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF 453
++ AC ++ GK +H + MG++ D + S+L+ +Y++ G+++ A+ +F N
Sbjct: 60 TFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNI 119
Query: 454 IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
++D VL+NVM+ Y +G AI +F EM IKP++VTF +LS +++G
Sbjct: 120 PQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGT 179
Query: 514 KYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE----DAVILGSFLN 569
+ + + + ++ ++ +Y + L+ A + ++P + + +I G N
Sbjct: 180 Q-LHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQN 238
Query: 570 VCRLNRNAELAGEAE 584
L GEAE
Sbjct: 239 --------GLMGEAE 245
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 198/613 (32%), Positives = 307/613 (50%), Gaps = 72/613 (11%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
E +V N +I+ +K D+ AR +FD P +D +++N+M+ GY + + L+LF
Sbjct: 227 ESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFEND-VCLEGLRLFF 285
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
M+ + + D T+TS ++ C L + GR++H +++KT A +SLI M+S
Sbjct: 286 MMR--EFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSS 343
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C++EA VF + E D VSW +IS
Sbjct: 344 VGCWDEAEMVFS---------------------------------KMEFKDLVSWTAMIS 370
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
GY +NG E+ ++ + M GV +E T AS LSAC GL + +H + + GL S
Sbjct: 371 GYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTS 430
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
V++ ++D+Y KC ++ A + F +
Sbjct: 431 YVIVANSLIDMYSKCRCIDKALEV-------------------------------FHRIP 459
Query: 353 EKNVVVWTALFSGY-VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG 411
KNV+ WT++ G + ++ EALF ++ + +++ LV +L ACA AL G
Sbjct: 460 NKNVISWTSIILGLRLNYRSFEALFFFQQMILSLK---PNSVTLVSVLSACARIGALSCG 516
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
KEIHA+ LR G+ D L + L+DMY +CG M A F N E+D+ +N+++ YA
Sbjct: 517 KEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQF-NSCEKDVASWNILLTGYAQQ 575
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH 531
G A+ LF +M+E + PD +TF ++L A G V G +YF SM + I+P H
Sbjct: 576 GKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKH 635
Query: 532 YACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLE 591
YA ++DL GRA +LE A EF+K +P + D I G+ LN CR+ +N EL A + + ++
Sbjct: 636 YASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMD 695
Query: 592 GNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSH 651
+ Y+ L N+YA G W E+ R+RK MR + GCSWV V ++H F GD H
Sbjct: 696 TKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFH 755
Query: 652 PKTNAIYSVLAIF 664
P+ I +VL F
Sbjct: 756 PQIKEINAVLEGF 768
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 129/489 (26%), Positives = 222/489 (45%), Gaps = 70/489 (14%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N ++S ++ DL +A +F +DL ++N ++ GY A GY +AL L+ M
Sbjct: 133 NALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKA-GYFDEALNLYHRMLWVG- 190
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
IR D +T L C L ++ GR++H +++ ++ V++LI MY KC
Sbjct: 191 -IRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKC------ 243
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
G++ A F R P D +SWN +ISGY +N
Sbjct: 244 --------------------------GDIFSARLVFDRMPR-RDRISWNAMISGYFENDV 276
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
EGL+LF M E V + T S +SAC L + + +E+H +V+K G ++ V+
Sbjct: 277 CLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVN-- 334
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
+S+I +S G +EA F + K++V W
Sbjct: 335 -----------------------------NSLIQMHSSVGCWDEAEMVFSKMEFKDLVSW 365
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
TA+ SGY K E + + + EGVV D + + +L ACA L G +H +
Sbjct: 366 TAMISGYEKNGLPEKAVETYT-IMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFAD 424
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
R G+ + ++L+DMYSKC + A +F ++++ + +I + +A+
Sbjct: 425 RTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALF 484
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
F++M+ +KP++VT V++LSA G++ G K ++ + + ++D+Y
Sbjct: 485 FFQQMI-LSLKPNSVTLVSVLSACARIGALSCG-KEIHAHALRTGLGFDGFLPNALLDMY 542
Query: 540 GRANQLEKA 548
R ++E A
Sbjct: 543 VRCGRMEPA 551
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 113/465 (24%), Positives = 180/465 (38%), Gaps = 104/465 (22%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H IK G N LI ++S E+ +F +M +++ SW +IS K
Sbjct: 319 HGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEK---- 374
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+ P K + TY M E + DE T+ S L
Sbjct: 375 -------NGLPEKAVETYTIM-----------------------EHEGVVPDEITIASVL 404
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C L + G LH F +T + +SLIDMYSKCRC ++A VF
Sbjct: 405 SACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFH-------- 456
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
R P N +SW ++I G N + E L F +M
Sbjct: 457 ------------------------RIPNKN-VISWTSIILGLRLNYRSFEALFFFQQMIL 491
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+ ++ N T S LSAC + + C KEIH+ L+ GL + F+ + ++D+Y +C
Sbjct: 492 S-LKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRC----- 545
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G ME A F+S EK+V W L +GY +
Sbjct: 546 --------------------------GRMEPAWNQFNS-CEKDVASWNILLTGYAQQGKG 578
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE-IHAYILRMGVQMDKKLIS 431
+L + + + V D + LL AC+ + G E + + + + K +
Sbjct: 579 GLAVELFHKMIESD-VNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYA 637
Query: 432 TLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMI-ACYAHHGHE 474
++VD+ + G + A E I + I+ D ++ ++ AC + E
Sbjct: 638 SVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVE 682
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 110/264 (41%), Gaps = 69/264 (26%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L + ++ H A + GLT I N LI +YSK + ++ ++F +P +NV SW +II
Sbjct: 413 LDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSII-- 470
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
L +N +E AL F +M + ++ +
Sbjct: 471 ----------------------------LGLRLNYRSFE--ALFFFQQMILS---LKPNS 497
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
T+ S L+ C ++ + G+++HA ++T GF ++L+DMY +C E A F
Sbjct: 498 VTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNS 557
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
C + D SWN L++GY Q G ++
Sbjct: 558 CEK----------------------------------DVASWNILLTGYAQQGKGGLAVE 583
Query: 246 LFVRMGENGVRWNEHTFASALSAC 269
LF +M E+ V +E TF S L AC
Sbjct: 584 LFHKMIESDVNPDEITFTSLLCAC 607
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 108/250 (43%), Gaps = 42/250 (16%)
Query: 329 SSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGV 388
+S+I+ L+G++E+A H DS+ E V V +
Sbjct: 63 NSLILELCLKGDLEKALIHLDSMQELQVSVEEETY------------------------- 97
Query: 389 VTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEI 448
+ LL C + A G +H+Y+ + ++ +L + L+ M+ + G++ A
Sbjct: 98 -------IALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWY 150
Query: 449 IFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGS 508
+F ERDL +NV++ YA G+ ++A+ L+ ML GI+PD TF +L R CG
Sbjct: 151 VFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVL---RTCGG 207
Query: 509 VE--MGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE----DAV 562
+ + + Y + D +I +Y + + A +P + +A+
Sbjct: 208 LPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAM 267
Query: 563 ILGSFLN-VC 571
I G F N VC
Sbjct: 268 ISGYFENDVC 277
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 208/720 (28%), Positives = 346/720 (48%), Gaps = 94/720 (13%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT--- 61
NL + H QA G+ + N+LI+ YS + L ++ LFD M R+ SW+
Sbjct: 93 NLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVG 152
Query: 62 --------------------------------IISAC--------------IKSHDLKQA 75
+I AC +K +++ A
Sbjct: 153 GFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMALVDMYVKCREIEDA 212
Query: 76 RSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLC 135
R LFD +DLVT+ M+ GY G ++L LF +M+ +E + D+ + + + C
Sbjct: 213 RFLFDKMQERDLVTWTVMIGGYAEC-GKANESLVLFEKMR--EEGVVPDKVAMVTVVFAC 269
Query: 136 VKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISK 195
KL + R + ++ + +++IDMY+KC C E A +F+ EE N+IS
Sbjct: 270 AKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDR-MEEKNVIS- 327
Query: 196 NAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGV 255
W+ +I+ Y +G + L LF M +G+
Sbjct: 328 -------------------------------WSAMIAAYGYHGQGRKALDLFRMMLSSGM 356
Query: 256 RWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAES 315
++ T AS L AC RN+ +++H+ +G++ N V++ +V Y ++ A
Sbjct: 357 LPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYG 416
Query: 316 MLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV--WTALFSGYVKAQNCE 373
+ VR+S S S M+ G++ G+ F L +T F G A
Sbjct: 417 LFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCG--NANESL 474
Query: 374 ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL 433
LFD + E EGVV D + +V ++ ACA A+H + I YI R Q+D L + +
Sbjct: 475 VLFDKMRE----EGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAM 530
Query: 434 VDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDA 493
+DM++KCG + A IF E++++ ++ MIA Y +HG KA+ LF ML GI P+
Sbjct: 531 IDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNK 590
Query: 494 VTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMK 553
+T V++L A H G VE G ++F+ M DY + + HY C++DL GRA +L++A++ ++
Sbjct: 591 ITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIE 650
Query: 554 SIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAE 613
S+ E+D + G+FL CR +++ LA +A LL L+ N Y+ L+N+YA G W +
Sbjct: 651 SMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWED 710
Query: 614 MGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIAG 673
+ + R M + + G +W+ V+++ H F+VGD +HP++ IY +L +L E+ G
Sbjct: 711 VAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKL-ELVG 769
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 140/303 (46%), Gaps = 59/303 (19%)
Query: 256 RWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAES 315
R N + SAL C RN+ +++H+ +G++ N V++ ++ Y ++ A
Sbjct: 78 RLNPKFYISALVNC---RNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYG 134
Query: 316 MLLLKGVRNSFSISSMIVGYSLQGN----------------------------------- 340
+ VR+S S S M+ G++ G+
Sbjct: 135 LFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKN 194
Query: 341 --------------MEEARRHFDSLTEKNVVVWTALFSGYV---KAQNCEALFDLLSEFV 383
+E+AR FD + E+++V WT + GY KA LF+ + E
Sbjct: 195 LQMALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMRE-- 252
Query: 384 TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNM 443
EGVV D + +V ++ ACA A+H + I YI R Q+D L + ++DMY+KCG +
Sbjct: 253 --EGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCV 310
Query: 444 TYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAF 503
A IF E++++ ++ MIA Y +HG KA+ LF ML G+ PD +T ++L A
Sbjct: 311 ESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYAC 370
Query: 504 RHC 506
+C
Sbjct: 371 INC 373
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 204/615 (33%), Positives = 315/615 (51%), Gaps = 48/615 (7%)
Query: 56 VFSWNTIISACI--KSHDLKQARSLFDSSP--HK-DLVTYNSMLCGYINAEGYEADALKL 110
VF + +I C S DL A SLF+ + HK ++ +NS++ GY + +
Sbjct: 60 VFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLF 119
Query: 111 FIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMY 170
+ ++ + T C K G+QLHA +K + + +S+I MY
Sbjct: 120 SRMLYYG---VQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMY 176
Query: 171 SKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTL 230
+ + A VF+ + + +S A++ +G ++ A + F P + D VSWN +
Sbjct: 177 ASVGEMDFARLVFDKSSLR-DAVSFTALITGYVSQGCLDDARRLFDEIP-VKDVVSWNAM 234
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL 290
ISGYVQ+G EE + F M E V N+ T LSAC R+ + K I SWV NG
Sbjct: 235 ISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGF 294
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
SN +++ ++D+YCKC G + AR FD
Sbjct: 295 GSNLQLTNALIDMYCKC-------------------------------GETDIARELFDG 323
Query: 351 LTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHP 410
+ EK+V+ W + GY E L E + + V + + + +L ACA AL
Sbjct: 324 IEEKDVISWNTMIGGYSYLSLYEEALALF-EVMLRSNVKPNDVTFLGILHACACLGALDL 382
Query: 411 GKEIHAYILR-MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYA 469
GK +HAYI + + + L ++L+DMY+KCG + AE +F++ R+L +N M++ +A
Sbjct: 383 GKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFA 442
Query: 470 HHGHEEKAILLFEEMLEKGI-KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE 528
HGH E+A+ LF EM+ KG+ +PD +TFV +LSA G V++G +YF SM DY ISP+
Sbjct: 443 MHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPK 502
Query: 529 TDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLL 588
HY CMIDL RA + E+A MK++ E D I GS L+ C+ + E E+L
Sbjct: 503 LQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLF 562
Query: 589 RLEGNNKARYVQLANVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTV 646
+LE N +V L+N+YA G W ++ RIR ++ +GMK + GC+ + ++ ++H F V
Sbjct: 563 QLEPENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMK--KVPGCTSIEIDGDVHEFLV 620
Query: 647 GDVSHPKTNAIYSVL 661
GD HP+ N IY +L
Sbjct: 621 GDKFHPECNNIYKML 635
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 204/426 (47%), Gaps = 33/426 (7%)
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
LNL K N+ +Q+H+ ++KT + + F S LI
Sbjct: 32 LNLLEKCKNINTFKQIHSLIIKTGLNNTVFVQSKLIHF---------------------- 69
Query: 192 LISKNAMVAACCREGEMEMALKTFW--RQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
A G++ AL F +Q ++ WN+LI GY + L LF R
Sbjct: 70 --------CAVSPSGDLSYALSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSR 121
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
M GV+ N HTF +C + K++H+ LK L NP V + ++ +Y
Sbjct: 122 MLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGE 181
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
M++A + +R++ S +++I GY QG +++ARR FD + K+VV W A+ SGYV++
Sbjct: 182 MDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQS 241
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
E E + + V+ + +V++L AC + GK I +++ G + +L
Sbjct: 242 GRFEEAIVCFYE-MQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQL 300
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+ L+DMY KCG A +F E+D++ +N MI Y++ E+A+ LFE ML +
Sbjct: 301 TNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNV 360
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
KP+ VTF+ IL A G++++G+ + + + S + +ID+Y + +E A
Sbjct: 361 KPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAE 420
Query: 550 EFMKSI 555
+S+
Sbjct: 421 RVFRSM 426
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 118/492 (23%), Positives = 212/492 (43%), Gaps = 72/492 (14%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A+K L +IH+Y+ + +R +FD+ R+ S+ +I+ + L
Sbjct: 154 HAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCL 213
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
AR LFD P KD+V++N+M+ GY+ + +E +A+ F EMQ A+ + ++ T+ L
Sbjct: 214 DDARRLFDEIPVKDVVSWNAMISGYVQSGRFE-EAIVCFYEMQEAN--VLPNKSTMVVVL 270
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C + G+ + +++ ++ ++LIDMY KC + A +F+G E+
Sbjct: 271 SACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEK--- 327
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
D +SWNT+I GY EE L LF M
Sbjct: 328 ------------------------------DVISWNTMIGGYSYLSLYEEALALFEVMLR 357
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKN-GLISNPFVSSGIVDVYCKCENMN 311
+ V+ N+ TF L AC L + K +H+++ KN SN + + ++D+Y KC +
Sbjct: 358 SNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIE 417
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
AE + RN S ++M+ G+++ G+ E A
Sbjct: 418 AAERVFRSMHSRNLASWNAMLSGFAMHGHAERA--------------------------- 450
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE-IHAYILRMGVQMDKKLI 430
L SE V K D + V +L AC + G + + I G+ +
Sbjct: 451 ----LALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHY 506
Query: 431 STLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
++D+ ++ AEI+ +N +E D ++ +++ HG E + E + + +
Sbjct: 507 GCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQ--L 564
Query: 490 KPDAVTFVAILS 501
+P+ +LS
Sbjct: 565 EPENAGAFVLLS 576
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 145/339 (42%), Gaps = 70/339 (20%)
Query: 259 EHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE---NMNYAES 315
+H + + L C +N+ K+IHS ++K GL + FV S ++ +C +++YA S
Sbjct: 28 QHPYLNLLEKC---KNINTFKQIHSLIIKTGLNNTVFVQSKLIH-FCAVSPSGDLSYALS 83
Query: 316 MLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEAL 375
+ EE ++H + NV +W +L GY + + +
Sbjct: 84 LF------------------------EENQQHH----KHNVFIWNSLIRGYSLSSSPLSS 115
Query: 376 FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVD 435
L S + GV ++ L +C A H GK++HA+ L++ + + + ++++
Sbjct: 116 LHLFSRMLYY-GVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIH 174
Query: 436 MYSKCGNMTYAEIIFQN----------------------------FIE---RDLVLYNVM 464
MY+ G M +A ++F F E +D+V +N M
Sbjct: 175 MYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAM 234
Query: 465 IACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYK 524
I+ Y G E+AI+ F EM E + P+ T V +LSA H S E+G K+ S D
Sbjct: 235 ISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELG-KWIGSWVRDNG 293
Query: 525 ISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVI 563
+ID+Y + + + A E I EE VI
Sbjct: 294 FGSNLQLTNALIDMYCKCGETDIARELFDGI--EEKDVI 330
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 198/660 (30%), Positives = 329/660 (49%), Gaps = 101/660 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K GL N L+ +Y + + +R +FD+M ER+V SW+T+I + ++ +
Sbjct: 117 HGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKE- 175
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
FD AL+L EM +R E + S +
Sbjct: 176 ------FDM-------------------------ALELIREMNFM--QVRPSEVAMVSMV 202
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSND--ASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
NL N+ G+ +HA++++ SN+ ++L+DMY+KC A ++F G T++
Sbjct: 203 NLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKT 262
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
++S AM+A C R +E EG KLF+RM
Sbjct: 263 -VVSWTAMIAGCIRSNRLE--------------------------------EGTKLFIRM 289
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
E + NE T S + C ++ K++H+++L+NG + +++ +VD+Y KC +
Sbjct: 290 QEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSD- 348
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
+RN AR FDS ++V++WTA+ S Y +A
Sbjct: 349 -----------IRN-------------------ARALFDSTQNRDVMIWTAMLSAYAQAN 378
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
+ F+L + T GV + +V LL CA+ AL GK +H+YI + V++D L
Sbjct: 379 CIDQAFNLFDQMRT-SGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILN 437
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+ LVDMY+KCG++ A +F I RD+ ++N +I +A HG+ E+A+ +F EM +G+K
Sbjct: 438 TALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVK 497
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
P+ +TF+ +L A H G V G+K F M + + P+ +HY CM+DL GRA L++A E
Sbjct: 498 PNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHE 557
Query: 551 FMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGN 610
+KS+P + + ++ G+ + CRL++N +L A +LL +E N V ++N+YAA
Sbjct: 558 MIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANR 617
Query: 611 WAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYE 670
W++ +RK M+ + + G S + V +H F +GD SHP+ I +LA +L E
Sbjct: 618 WSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNE 677
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 89/183 (48%), Gaps = 9/183 (4%)
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD 457
+L AC + GKEIH ++L+ G+ D + + L+ MY +C + YA ++F +ERD
Sbjct: 100 VLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERD 159
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKY-- 515
+V ++ MI + + + A+ L EM ++P V V++++ F ++ MG+
Sbjct: 160 VVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHA 219
Query: 516 --FNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVC-R 572
+ ++ P T ++D+Y + L A + + T++ V + + C R
Sbjct: 220 YVIRNSNNEHMGVPTT---TALLDMYAKCGHLGLARQLFNGL-TQKTVVSWTAMIAGCIR 275
Query: 573 LNR 575
NR
Sbjct: 276 SNR 278
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 200/659 (30%), Positives = 324/659 (49%), Gaps = 75/659 (11%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIH--IYSKHNLLRESRKLFDEMPERNVFSWNTII 63
L+ + H Q IK GL T ++LI I S H FD +P
Sbjct: 3 LQSLRMIHAQMIKTGLHNTNYALSKLIEFCILSPH---------FDGLP----------- 42
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
A S+F++ +L+ +N+M G+ + ALKL++ M S +
Sbjct: 43 ----------YAISVFETIQEPNLLIWNTMFRGHALSSD-PVSALKLYVCMISLG--LLP 89
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
+ +T L C K G+Q+H ++K D + +SLI MY + E+A +VF
Sbjct: 90 NSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVF 149
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
+ +++S A++ G +E A K F P + D VSWN +ISGY + G+ +E
Sbjct: 150 DESPHR-DVVSYTALIKGYASRGYIENAQKMFDEIP-VKDVVSWNAMISGYAETGNYKEA 207
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
L+LF M + VR +E T + +SAC +++ +++HSW+ +G SN + + ++D+
Sbjct: 208 LELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDL 267
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y KC G +E A F+ L K+V+ W L
Sbjct: 268 YSKC-------------------------------GELETACGLFEGLPYKDVISWNTLI 296
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM-- 421
GY + L E + + G + + ++ +L ACA A+ G+ IH YI +
Sbjct: 297 GGYTHMNLYKEALLLFQEML-RSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLK 355
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
GV L ++L+DMY+KCG++ A +F + + + L +N MI +A HG + + +F
Sbjct: 356 GVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIF 415
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGR 541
M + GI+PD +TFV +LSA H G +++G F SMT DYK++P+ +HY CMIDL G
Sbjct: 416 SRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGH 475
Query: 542 ANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQL 601
+ ++A E + ++ E D VI S L C+++ N EL + L+++E N YV L
Sbjct: 476 SGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLL 535
Query: 602 ANVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
+N+YA G W E+ R + +GMK + GCS + ++ +H F +GD HP+ IY
Sbjct: 536 SNIYATAGRWNEVANTRALLNDKGMK--KVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 592
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 164/600 (27%), Positives = 260/600 (43%), Gaps = 129/600 (21%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
+S KE H +K G L LI +Y ++ L ++ K+FDE P R+V S+
Sbjct: 103 KSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTA 162
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I ++ A+ +FD P KD+V++N+M+ GY Y+ +AL+LF +M + +
Sbjct: 163 LIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYK-EALELFKDMMKTN--V 219
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFA-----VSSLIDMYSKCRCY 176
R DE T+ + ++ C + ++ GRQ+H+++ D GF V++LID+YSKC
Sbjct: 220 RPDESTMVTVVSACAQSGSIELGRQVHSWI-----DDHGFGSNLKIVNALIDLYSKCGEL 274
Query: 177 EEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQ 236
E AC +FEG D +SWNTLI GY
Sbjct: 275 ETACGLFEGLP---------------------------------YKDVISWNTLIGGYTH 301
Query: 237 NGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFV 296
+E L LF M +G N+ T S L AC L + + IH ++ K
Sbjct: 302 MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKR-------- 353
Query: 297 SSGIVDVYCKCENMNYAESMLLLKGVRNSFSI-SSMIVGYSLQGNMEEARRHFDSLTEKN 355
LKGV N+ S+ +S+I Y+ G++E A + F+S+ K+
Sbjct: 354 ----------------------LKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKS 391
Query: 356 VVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIH 415
+ W A+ G+ +A FD+ S + K G+ D + V LL AC+ L G+
Sbjct: 392 LSSWNAMIFGFAMHGRADASFDIFSR-MRKNGIEPDDITFVGLLSACSHSGMLDLGR--- 447
Query: 416 AYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEE 475
+I R Q D K+ L Y MI H G +
Sbjct: 448 -HIFRSMTQ-DYKMTPKLEH-------------------------YGCMIDLLGHSGLFK 480
Query: 476 KAILLFEEMLEK-GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD-HYA 533
+A EEM+ ++PD V + ++L A + G+VE+GE + ++ KI PE Y
Sbjct: 481 EA----EEMINTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLI---KIEPENPGSYV 533
Query: 534 CMIDLY---GRANQLEKAIEF-----MKSIP----TEEDAVILGSFLNVCRLNRNAELAG 581
+ ++Y GR N++ MK +P E D+V+ + RN E+ G
Sbjct: 534 LLSNIYATAGRWNEVANTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYG 593
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 315 bits (806), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 192/607 (31%), Positives = 312/607 (51%), Gaps = 68/607 (11%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
+ FS N ++ K DL A S+F+ D+V++N+++ G + E +E AL+L +M
Sbjct: 292 DPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHE-QALELLGQM 350
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
+ + I + FT++S L C + GRQLH+ ++K ++ F L+DMYSKC
Sbjct: 351 KRSG--ICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCD 408
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
E+A F NL+ PE D ++WN +ISGY
Sbjct: 409 LLEDARMAF-------NLL-------------------------PE-KDLIAWNAIISGY 435
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
Q + E L LFV M + G+ +N+ T ++ L + GL+ V +++H +K+G S+
Sbjct: 436 SQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDI 495
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
+V + ++D Y KC ++ AE + + + S +SMI Y+ G EEA + F
Sbjct: 496 YVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLF------ 549
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
++ Q+ E + D + LL ACA +A GK++
Sbjct: 550 ------------LEMQDME--------------LKPDRFVCSSLLNACANLSAFEQGKQL 583
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
H +IL+ G +D ++LV+MY+KCG++ A F ER +V ++ MI A HGH
Sbjct: 584 HVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHG 643
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC 534
+A+ LF +ML++G+ P+ +T V++L A H G V + YF SM + P +HYAC
Sbjct: 644 RQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYAC 703
Query: 535 MIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNN 594
MIDL GRA ++ +A+E + +P E +A + G+ L R++++ EL A E L LE
Sbjct: 704 MIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEK 763
Query: 595 KARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKT 654
+V LAN+YA+ G W + +R+ MR K + G SW+ V+ +++ F VGD SH ++
Sbjct: 764 SGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRS 823
Query: 655 NAIYSVL 661
IY+ L
Sbjct: 824 QEIYAKL 830
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 133/464 (28%), Positives = 233/464 (50%), Gaps = 72/464 (15%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
E +VF NT++ K + ++ LFD P +++V++N++ Y+ + + +A+ LF
Sbjct: 189 EGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQID-FCGEAVGLFY 247
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
EM + I+ +EF+++S +N C L + G+ +H +++K D F+ ++L+DMY+K
Sbjct: 248 EMVLSG--IKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAK 305
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
+A VFE +QP D VSWN +I+
Sbjct: 306 VGDLADAISVFEKI------------------------------KQP---DIVSWNAVIA 332
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
G V + E+ L+L +M +G+ N T +SAL AC G+ + +++HS ++K + S
Sbjct: 333 GCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMES 392
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
+ FVS G+VD+Y KC+ +E+AR F+ L
Sbjct: 393 DLFVSVGLVDMYSKCD-------------------------------LLEDARMAFNLLP 421
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVT--KEGVVTDALILVILLGACALQAALHP 410
EK+++ W A+ SGY +Q E + + LS FV KEG+ + L +L + A +H
Sbjct: 422 EKDLIAWNAIISGY--SQYWEDM-EALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHV 478
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
+++H ++ G D ++++L+D Y KC ++ AE IF+ DLV + MI YA
Sbjct: 479 CRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQ 538
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
+G E+A+ LF EM + +KPD ++L+A + + E G++
Sbjct: 539 YGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQ 582
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 159/657 (24%), Positives = 273/657 (41%), Gaps = 155/657 (23%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L+ L H K+GL+ N LI++YSK
Sbjct: 71 SLRPGLQIHAHITKSGLSDDPSIRNHLINLYSK--------------------------- 103
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
+ AR L D S DLV++++++ GY G AL F EM ++ +
Sbjct: 104 ----CRNFGYARKLVDESSEPDLVSWSALISGYAQ-NGLGGGALMAFHEMHLLG--VKCN 156
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
EFT +S L C + ++ G+Q+H +V + + F ++L+ MY+KC + ++ R+F+
Sbjct: 157 EFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFD 216
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
PE N VSWN L S YVQ E +
Sbjct: 217 --------------------------------EIPERN-VVSWNALFSCYVQIDFCGEAV 243
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
LF M +G++ NE + +S ++AC GLR+ K IH +++K G +PF ++ +VD+Y
Sbjct: 244 GLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMY 303
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
K G++ +A F+ + + ++V W A+ +
Sbjct: 304 AKV-------------------------------GDLADAISVFEKIKQPDIVSWNAVIA 332
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
G V ++ E +LL + + + G+ + L L ACA G+++H+ +++M ++
Sbjct: 333 GCVLHEHHEQALELLGQ-MKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDME 391
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
D + LVDMYSKC + A + F E+DL+ +N +I+ Y+ + + +A+ LF EM
Sbjct: 392 SDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEM 451
Query: 485 LEKGIKPDAVTFVAIL-----------------------------------SAFRHCGSV 509
++GI + T IL ++ C V
Sbjct: 452 HKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHV 511
Query: 510 EMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF---MKSIPTEEDAVILGS 566
E E+ F T +S + MI Y + Q E+A++ M+ + + D + S
Sbjct: 512 EDAERIFEECTIGDLVS-----FTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSS 566
Query: 567 FLNVCRLNRNAELAGEAEEKLLR-------LEGNNKARYVQLANVYAAEGNWAEMGR 616
LN C E + +L+ GN+ L N+YA G+ + GR
Sbjct: 567 LLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNS------LVNMYAKCGSIDDAGR 617
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 126/451 (27%), Positives = 204/451 (45%), Gaps = 79/451 (17%)
Query: 126 FTVTST-----LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
FT TS L+ C ++ G Q+HA + K+ + LI++YSKCR + A
Sbjct: 52 FTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYAR 111
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
++ + +E D VSW+ LISGY QNG
Sbjct: 112 KLVDESSEP---------------------------------DLVSWSALISGYAQNGLG 138
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
L F M GV+ NE TF+S L AC +++++ K++H V+ +G + FV++ +
Sbjct: 139 GGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTL 198
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
V +Y KC+ +++R FD + E+NVV W
Sbjct: 199 VVMYAKCDEF-------------------------------LDSKRLFDEIPERNVVSWN 227
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
ALFS YV+ C L E V G+ + L ++ AC GK IH Y+++
Sbjct: 228 ALFSCYVQIDFCGEAVGLFYEMVL-SGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIK 286
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
+G D + LVDMY+K G++ A +F+ + D+V +N +IA H H E+A+ L
Sbjct: 287 LGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALEL 346
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC--MIDL 538
+M GI P+ T + L A G E+G + +S+ K+ E+D + ++D+
Sbjct: 347 LGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLM---KMDMESDLFVSVGLVDM 403
Query: 539 YGRANQLEKAIEFMKSIPTEE----DAVILG 565
Y + + LE A +P ++ +A+I G
Sbjct: 404 YSKCDLLEDARMAFNLLPEKDLIAWNAIISG 434
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 161/350 (46%), Gaps = 68/350 (19%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
E ++F ++ K L+ AR F+ P KDL+ +N+++ GY + + +AL LF+
Sbjct: 391 ESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGY-SQYWEDMEALSLFV 449
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
EM E I ++ T+++ L L V RQ+H VK+ + + V+SLID Y K
Sbjct: 450 EMHK--EGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGK 507
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C E+A R+FE CT +L+S +M+ A + G+
Sbjct: 508 CSHVEDAERIFEECTIG-DLVSFTSMITAYAQYGQ------------------------- 541
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
EE LKLF+ M + ++ + +S L+AC L + K++H +LK G +
Sbjct: 542 -------GEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVL 594
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
+ F + +V++Y KC G++++A R F LT
Sbjct: 595 DIFAGNSLVNMYAKC-------------------------------GSIDDAGRAFSELT 623
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGAC 402
E+ +V W+A+ G + + L ++ + KEGV + + LV +LGAC
Sbjct: 624 ERGIVSWSAMIGGLAQHGHGRQALQLFNQML-KEGVSPNHITLVSVLGAC 672
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 124/272 (45%), Gaps = 52/272 (19%)
Query: 8 EALICHVQAIKAGL-----TLTTITTN----QLIHIYSK-HNLLRESRKLFDEMPERNVF 57
EAL V+ K G+ TL+TI + Q++H+ + H L +S +++
Sbjct: 443 EALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGF------HSDIY 496
Query: 58 SWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSA 117
N++I + K ++ A +F+ DLV++ SM+ Y G +ALKLF+EMQ
Sbjct: 497 VVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQY-GQGEEALKLFLEMQ-- 553
Query: 118 DEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYE 177
D ++ D F +S LN C L G+QLH ++K FA +SL++MY+KC +
Sbjct: 554 DMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSID 613
Query: 178 EACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQN 237
+A R F TE ++S +AM I G Q+
Sbjct: 614 DAGRAFSELTER-GIVSWSAM--------------------------------IGGLAQH 640
Query: 238 GDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
G + L+LF +M + GV N T S L AC
Sbjct: 641 GHGRQALQLFNQMLKEGVSPNHITLVSVLGAC 672
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 192/610 (31%), Positives = 310/610 (50%), Gaps = 72/610 (11%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
E F N +I +KS + A ++FDS +D VT+N M+ GY A G+ + ++F
Sbjct: 237 EFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYA-AIGFYLEGFQMFH 295
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
M+ A +++ + L LC + + F +QLH +VK + + ++L+ YSK
Sbjct: 296 RMRLAG--VKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSK 353
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C +EA ++F +M A ++ V+W +I
Sbjct: 354 CSSVDEAFKLF-------------SMADAA-------------------HNVVTWTAMIG 381
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
G+VQN + E+ + LF +M GVR N T+++ L+ + ++H+ ++K
Sbjct: 382 GFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAG----KPSSLLSQLHAQIIKAYYEK 437
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
P V++ ++D Y K GN+ E+ R F S+
Sbjct: 438 VPSVATALLDAYVKT-------------------------------GNVVESARVFYSIP 466
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAA-LHPG 411
K++V W+A+ +G + ++ E ++ + V KEGV + ++ AC+ AA + G
Sbjct: 467 AKDIVAWSAMLTGLAQTRDSEKAMEVFIQLV-KEGVKPNEYTFSSVINACSSSAATVEHG 525
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
K+IHA ++ G + S L+ MYSK GN+ AE +F ERD+V +N MI Y H
Sbjct: 526 KQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQH 585
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH 531
G +KA+ +F+ M +G+ D VTF+ +L+A H G VE GEKYFN M DY I + +H
Sbjct: 586 GDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEH 645
Query: 532 YACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLE 591
Y+CM+DLY RA +KA++ + +P I + L CR++RN EL A EKL+ L+
Sbjct: 646 YSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQ 705
Query: 592 GNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSH 651
N+ YV L+N++A GNW E +RK M K + AGCSW+ +++ I F GDVSH
Sbjct: 706 PNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSH 765
Query: 652 PKTNAIYSVL 661
P ++ +Y+ L
Sbjct: 766 PFSDLVYAKL 775
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 137/593 (23%), Positives = 253/593 (42%), Gaps = 95/593 (16%)
Query: 27 TTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKD 86
+ + + H H L F +P R + A LFD +P KD
Sbjct: 26 SIHHIKHFLHPHGFLYHQSLPFISLPSRP-----------------RYAHQLFDETPLKD 68
Query: 87 LVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQ 146
+ YN +L + + ++ +AL LF ++ S+ + +D T++ L +C L + GRQ
Sbjct: 69 ISHYNRLLFDF-SRNNHDREALHLFKDLHSSG--LGVDGLTLSCALKVCGVLFDQVVGRQ 125
Query: 147 LHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREG 206
+H +K+ +SL+DMY K +E+ +F+
Sbjct: 126 VHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFD---------------------- 163
Query: 207 EMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASAL 266
EM +K + VSW +L+SGY +NG +E + L +M GV N TFA+ L
Sbjct: 164 --EMGIK---------NVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVL 212
Query: 267 SACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSF 326
A ++ ++H+ ++KNG FV + ++ +Y K E + AE++ VR+S
Sbjct: 213 GALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSV 272
Query: 327 SISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKE 386
+ + MI GY+ G E + F + V + +F C A
Sbjct: 273 TWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVF--------CTA------------ 312
Query: 387 GVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYA 446
L C+ Q L+ K++H +++ G + + + + L+ YSKC ++ A
Sbjct: 313 ------------LKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEA 360
Query: 447 EIIFQNF-IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRH 505
+F ++V + MI + + + EKA+ LF +M +G++P+ T+ +L+
Sbjct: 361 FKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAG--- 417
Query: 506 CGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILG 565
S + + + + A Y+ P ++D Y + + ++ SIP +D V
Sbjct: 418 KPSSLLSQLHAQIIKAYYEKVPSV--ATALLDAYVKTGNVVESARVFYSIPA-KDIVAWS 474
Query: 566 SFLNVCRLNRNAELAGEAEEKLLRLEG--NNKARYVQLANVYAAEGNWAEMGR 616
+ L R++E A E +L++ EG N+ + + N ++ E G+
Sbjct: 475 AMLTGLAQTRDSEKAMEVFIQLVK-EGVKPNEYTFSSVINACSSSAATVEHGK 526
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 125/308 (40%), Gaps = 57/308 (18%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A+K+G + ++ L+ +YSK + + K+F ER++ SWN
Sbjct: 529 HATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWN------------ 576
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
SM+ GY G AL++F MQ ++ + +D+ T L
Sbjct: 577 -------------------SMITGY-GQHGDAKKALEVFQIMQ--NQGLPLDDVTFIGVL 614
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSN-DASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
C V G + M+K + D S ++D+YS+ +++A + G +
Sbjct: 615 TACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPAS 674
Query: 192 LISKNAMVAACCREGEMEM----ALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
++AAC +E+ A K QP NDAV + L + + G+ EE +
Sbjct: 675 PTIWRTLLAACRVHRNLELGKLAAEKLVSLQP--NDAVGYVLLSNIHAVAGNWEEKAHVR 732
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF---VSSGIVDVY 304
M E V+ A C +K I S++ G +S+PF V + + ++
Sbjct: 733 KLMDERKVK---------KEAGCSWIEIK--NRIFSFLA--GDVSHPFSDLVYAKLEELS 779
Query: 305 CKCENMNY 312
K ++M Y
Sbjct: 780 IKLKDMGY 787
>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Vitis vinifera]
Length = 662
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 193/595 (32%), Positives = 310/595 (52%), Gaps = 42/595 (7%)
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
+L A +F+ L YN ++ + G A+ LF +++ +E + D FT
Sbjct: 81 NLHYAERIFNYIDIPGLFIYNLVIKAF-TKNGSFRKAVLLFRQLR--EEGLSPDNFTYPF 137
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L V G +++ F+VK+ + + +SL+DMY++
Sbjct: 138 VFKAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEV----------------- 180
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
G ++ + F P+ D VSWN LISGYV+ E+ + +F RM
Sbjct: 181 ---------------GRVQNLRQVFEEMPQ-RDVVSWNVLISGYVKCRRYEDAVDVFRRM 224
Query: 251 GE-NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
+ + +R NE T S LSAC L+ ++ KEIH +V + L + + +VD+YCKC +
Sbjct: 225 QQQSSLRPNEATVVSTLSACIALKMLELGKEIHRYV-REQLGFTIKIGNALVDMYCKCGH 283
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
++ A + ++ +SM+ GY G ++EAR F+ ++VV+WTA+ +GYV+
Sbjct: 284 LSIAREIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQF 343
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
+ L E K V D LV LL CA L GK IH YI + +D +
Sbjct: 344 NRFDDAVALFREMQIKR-VSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDENKIMIDAVV 402
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+ L++MY+KCG + + IF E+D + +I A +G KA+ LF EM++ G+
Sbjct: 403 GTALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTGV 462
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
KPD +TF+ +LSA H G VE G K+F SMTA Y+I P+ +HY C+IDL GRA QL++A
Sbjct: 463 KPDDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAE 522
Query: 550 EFMKSIPTEEDAVIL---GSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYA 606
E ++ P + VI+ G+ L+ CR + N E+ ++L+ +E + + + LAN+YA
Sbjct: 523 ELIEKSPNVNNEVIVPLYGALLSACRTHGNVEMGERVAKRLVGIESGDSSVHTLLANIYA 582
Query: 607 AEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+ W ++ ++R++M+ + + GCS V V +H F VGD SHP+ IYS+L
Sbjct: 583 SADRWEDVTKVRRKMKDLGVKKVPGCSSVEVNGIVHEFLVGDASHPEMREIYSML 637
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 129/546 (23%), Positives = 235/546 (43%), Gaps = 112/546 (20%)
Query: 16 AIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQA 75
+K+GL T N L+ +Y++ ++ R++F+EMP+R+V SWN +IS
Sbjct: 158 VVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLIS----------- 206
Query: 76 RSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLC 135
GY+ YE DA+ +F MQ +R +E TV STL+ C
Sbjct: 207 --------------------GYVKCRRYE-DAVDVFRRMQQQSS-LRPNEATVVSTLSAC 244
Query: 136 VKLLNVGFGRQLHAFMVKTSNDASGFAV---SSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ L + G+++H ++ + GF + ++L+DMY KC A +F + +
Sbjct: 245 IALKMLELGKEIHRYV----REQLGFTIKIGNALVDMYCKCGHLSIAREIFNDMPIK-TV 299
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
I +MV+ G+++ A + F R P + D V W +I+GYVQ ++ + LF M
Sbjct: 300 ICWTSMVSGYVNCGQLDEARELFERSP-VRDVVLWTAMINGYVQFNRFDDAVALFREMQI 358
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
V + T + L+ C L ++ K IH ++ +N ++ + V + ++++Y KC
Sbjct: 359 KRVSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDENKIMIDAVVGTALIEMYAKC----- 413
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G +E++ F+ L EK+ WT++ G
Sbjct: 414 --------------------------GFIEKSLEIFNGLKEKDTASWTSIICGLAMNGKT 447
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL--I 430
+L +E V + GV D + + +L AC+ + G++ H + Q++ KL
Sbjct: 448 SKALELFAEMV-QTGVKPDDITFIGVLSACSHGGLVEEGRK-HFRSMTAVYQIEPKLEHY 505
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYN-VMIACYAHHGHEEKAILLFEEMLEKGI 489
L+D+ + G + AE IE+ + N V++ Y
Sbjct: 506 GCLIDLLGRAGQLDEAE----ELIEKSPNVNNEVIVPLYG-------------------- 541
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
A+LSA R G+VEMGE+ + S ++ + + ++Y A++ E
Sbjct: 542 --------ALLSACRTHGNVEMGERVAKRLVGIE--SGDSSVHTLLANIYASADRWEDVT 591
Query: 550 EFMKSI 555
+ + +
Sbjct: 592 KVRRKM 597
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 134/296 (45%), Gaps = 12/296 (4%)
Query: 339 GNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVIL 398
GN+ A R F+ + + ++ + + K + LL + +EG+ D +
Sbjct: 80 GNLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAV-LLFRQLREEGLSPDNFTYPFV 138
Query: 399 LGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDL 458
A + G++++ ++++ G++ D + ++L+DMY++ G + +F+ +RD+
Sbjct: 139 FKAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDV 198
Query: 459 VLYNVMIACYAHHGHEEKAILLFEEMLEK-GIKPDAVTFVAILSAFRHCGSVEMGEKYFN 517
V +NV+I+ Y E A+ +F M ++ ++P+ T V+ LSA +E+G++
Sbjct: 199 VSWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIHR 258
Query: 518 SMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEED---AVILGSFLNVCRLN 574
+ + + + ++D+Y + L A E +P + ++ ++N +L+
Sbjct: 259 YVREQLGFTIKIGN--ALVDMYCKCGHLSIAREIFNDMPIKTVICWTSMVSGYVNCGQLD 316
Query: 575 RNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFA 630
EL + + + L YVQ A + EM Q++ + +RF
Sbjct: 317 EARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREM-----QIKRVSPDRFT 367
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Query: 412 KEIHAYILRMGVQMD----KKLISTLVDMYSKCGNMTYAEIIFQNFIE-RDLVLYNVMIA 466
K+I ILR G K + D GN+ YAE IF N+I+ L +YN++I
Sbjct: 49 KQIQTQILRTGFHQSGDTLNKFMVCCTD--PSIGNLHYAERIF-NYIDIPGLFIYNLVIK 105
Query: 467 CYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKIS 526
+ +G KA+LLF ++ E+G+ PD T+ + A G V GEK + + K
Sbjct: 106 AFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFKAIGCLGEVREGEKVYGFVV---KSG 162
Query: 527 PETDHYAC--MIDLYGRANQLEKAIEFMKSIPTEE 559
E D Y C ++D+Y +++ + + +P +
Sbjct: 163 LEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRD 197
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 314 bits (805), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 202/659 (30%), Positives = 332/659 (50%), Gaps = 50/659 (7%)
Query: 17 IKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQAR 76
I + I N+ I + + + ++ +LF MP R+ ++NT+++ + L QA
Sbjct: 99 ITGKPDMEVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQAL 158
Query: 77 SLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCV 136
S F S P D +YN++L + AD LF EM D + V + +
Sbjct: 159 SFFRSIPRPDSFSYNTLLHA-LGVSSSLADVRALFDEMPVKDSV----SYNVMISSHANH 213
Query: 137 KLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKN 196
L+++ H F + DA + + ++ Y + +EA +F+ TE + IS N
Sbjct: 214 GLVSLA----RHYFDLAPEKDAVSW--NGMLAAYVRNGRIQEARELFDSRTE-WDAISWN 266
Query: 197 AMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVR 256
A++A + ++E A K F + P+ D VSWNT++SGY + GD E +LF
Sbjct: 267 ALMAGYVQRSQIEEAQKMFNKMPQ-RDVVSWNTMVSGYARRGDMAEARRLF--------- 316
Query: 257 WNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI------------SNPFVSSGIVDVY 304
+R+V I S +NG++ N + ++ Y
Sbjct: 317 -----------DVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDKNAVSWNAMMAAY 365
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
+ M A+ + RN S ++M+ GY+ G ++EAR F + +K+ V W A+ +
Sbjct: 366 VQRRMMEEAKELFDAMPCRNVASWNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLA 425
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
Y + E L E + + G + +L CA AAL G ++H+ +++ G
Sbjct: 426 AYSQIGFSEETLQLFKE-MGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYG 484
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
+ + + L+ MY KCG+M A F+ ERD+V +N MIA YA HG ++A+ +F+ M
Sbjct: 485 VGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTM 544
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
+ KPD +T V +L+A H G VE G YF SM D+ ++ + +HY CMIDL GRA +
Sbjct: 545 RKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGR 604
Query: 545 LEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANV 604
L++A+ MK +P E D+ + G+ L R++RN+EL A EK+ LE N YV L+N+
Sbjct: 605 LDEAVNLMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNI 664
Query: 605 YAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
YA+ G W ++ ++R M RG+K + G SW+ V++++H F+VGD HP+ IY+ L
Sbjct: 665 YASSGKWRDVDKMRHIMHERGVK--KVPGFSWIEVQNKVHTFSVGDSVHPEREDIYAFL 721
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + IKAG + N L+ +Y K + E+ F+EM ER+V SWNT+I+ +
Sbjct: 475 HSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFG 534
Query: 73 KQARSLFDS 81
K+A +FD+
Sbjct: 535 KEALEVFDT 543
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 314 bits (805), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 215/690 (31%), Positives = 335/690 (48%), Gaps = 71/690 (10%)
Query: 15 QAIKAGLTLTTITTNQLIHIYSKHNLL---RESRKLFDEMPERNVFSWNTIISACIKSHD 71
Q I GL ++LI+ S L S ++F+ + N F+WNTI+
Sbjct: 25 QTILTGLITDPYAASRLINFSSHSTTLVPFHYSLRIFNHLRNPNTFTWNTIM-------- 76
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
+A +SPH+ L+ Y KLF+ H + D +T
Sbjct: 77 --RAHLYLQNSPHQALLHY------------------KLFLA-----SHAKPDSYTYPIL 111
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L C ++ GRQLHA V + D + ++L+++Y+ C A RVFE + ++
Sbjct: 112 LQCCAARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEE-SPVLD 170
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELN----------------------------- 222
L+S N ++A + GE+E A + F PE N
Sbjct: 171 LVSWNTLLAGYVQAGEVEEAERVFEGMPERNTIASNSMIALFGRKGCVEKARRIFNGVRG 230
Query: 223 ---DAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAK 279
D VSW+ ++S Y QN EE L LFV M +GV +E SALSAC + NV+ +
Sbjct: 231 RERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGR 290
Query: 280 EIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKG-VRNSFSISSMIVGYSLQ 338
+H +K G+ + + ++ +Y C + A + G + + S +SMI GY
Sbjct: 291 WVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRC 350
Query: 339 GNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVIL 398
G++++A F S+ EK+VV W+A+ SGY + + L E + GV D LV
Sbjct: 351 GSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQE-MQLHGVRPDETALVSA 409
Query: 399 LGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDL 458
+ AC A L GK IHAYI R +Q++ L +TL+DMY KCG + A +F E+ +
Sbjct: 410 ISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGV 469
Query: 459 VLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNS 518
+N +I A +G E+++ +F +M + G P+ +TF+ +L A RH G V G YFNS
Sbjct: 470 STWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNS 529
Query: 519 MTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAE 578
M ++KI HY CM+DL GRA L++A E + S+P D G+ L CR +R+ E
Sbjct: 530 MIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRDNE 589
Query: 579 LAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVE 638
+ KL++L+ ++ +V L+N+YA++GNW + IR M + GCS +
Sbjct: 590 MGERLGRKLIQLQPDHDGFHVLLSNIYASKGNWGNVLEIRGIMAQHGVVKTPGCSMIEAN 649
Query: 639 HEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
+H F GD +HP+ N I +L + +L
Sbjct: 650 GTVHEFLAGDKTHPQINDIEHMLDVVAAKL 679
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 133/523 (25%), Positives = 242/523 (46%), Gaps = 71/523 (13%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A+ +G N L+++Y+ + +R++F+E P ++ SWNT+++ +++ ++
Sbjct: 128 HAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAGEV 187
Query: 73 KQARSLFDSSPHKDLVTYNSMLCG-------------YINAEGYEAD------------- 106
++A +F+ P ++ + NSM+ + G E D
Sbjct: 188 EEAERVFEGMPERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQ 247
Query: 107 ------ALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASG 160
AL LF+EM+ + +DE V S L+ C ++LNV GR +H VK +
Sbjct: 248 NEMGEEALVLFVEMKGSGV--AVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYV 305
Query: 161 FAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPE 220
++LI +YS C +A R+F+ E ++LIS N+M++ R G ++ A F+ PE
Sbjct: 306 SLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPE 365
Query: 221 LNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKE 280
D VSW+ +ISGY Q+ E L LF M +GVR +E SA+SAC L + K
Sbjct: 366 -KDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKW 424
Query: 281 IHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGN 340
IH+++ +N L N +S+ ++D+Y KC G
Sbjct: 425 IHAYISRNKLQVNVILSTTLIDMYMKC-------------------------------GC 453
Query: 341 MEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLG 400
+E A F ++ EK V W A+ G + E ++ ++ + K G V + + + +LG
Sbjct: 454 VENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFAD-MKKTGTVPNEITFMGVLG 512
Query: 401 ACALQAALHPGKE-IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDL 458
AC ++ G+ ++ I ++ + K +VD+ + G + AE + + + D+
Sbjct: 513 ACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDV 572
Query: 459 VLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
+ ++ H E L ++++ ++PD F +LS
Sbjct: 573 ATWGALLGACRKHRDNEMGERLGRKLIQ--LQPDHDGFHVLLS 613
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 128/269 (47%), Gaps = 37/269 (13%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPE-RNVFSWN 60
R LN++ H A+K G+ N LIH+YS + ++R++FD+ E ++ SWN
Sbjct: 282 RVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWN 341
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
++IS ++ ++ A LF S P KD+V++++M+ GY E + ++AL LF EMQ
Sbjct: 342 SMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECF-SEALALFQEMQL--HG 398
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
+R DE + S ++ C L + G+ +HA++ + + ++LIDMY KC C E A
Sbjct: 399 VRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENAL 458
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
VF ME + W N +I G NG
Sbjct: 459 EVFYA----------------------MEEKGVSTW-----------NAVILGLAMNGSV 485
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSAC 269
E+ L +F M + G NE TF L AC
Sbjct: 486 EQSLNMFADMKKTGTVPNEITFMGVLGAC 514
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 124/281 (44%), Gaps = 38/281 (13%)
Query: 272 LRNVKCA---KEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSI 328
L++ KC K++ S + GLI++P+ +S +++ +S S
Sbjct: 10 LQSCKCPRHFKQLLSQTILTGLITDPYAASRLINF--------------------SSHST 49
Query: 329 SSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGV 388
+ + YSL R F+ L N W + ++ QN L +
Sbjct: 50 TLVPFHYSL--------RIFNHLRNPNTFTWNTIMRAHLYLQNSPHQALLHYKLFLASHA 101
Query: 389 VTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEI 448
D+ ILL CA + + G+++HA+ + G D + +TL+++Y+ CG++ A
Sbjct: 102 KPDSYTYPILLQCCAARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARR 161
Query: 449 IFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGS 508
+F+ DLV +N ++A Y G E+A +FE M E+ + + ++++ F G
Sbjct: 162 VFEESPVLDLVSWNTLLAGYVQAGEVEEAERVFEGMPER----NTIASNSMIALFGRKGC 217
Query: 509 VEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
VE + FN + + + ++ M+ Y + E+A+
Sbjct: 218 VEKARRIFNGVRGRER---DMVSWSAMVSCYEQNEMGEEAL 255
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 314 bits (805), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 212/662 (32%), Positives = 327/662 (49%), Gaps = 76/662 (11%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYS---KHNLLRESRKLFDEMPERNVFSWNT 61
+ K+ L H Q I GL + ++LI +S + L SR LF ++ N+F WNT
Sbjct: 21 SFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFMWNT 80
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I +S + P + +V Y SM+ A+G
Sbjct: 81 MIRGYSRSDN-----------PREAIVLYMSMI-----AKGIAPP--------------- 109
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+ FT LN C +L ++ G ++H+ ++K ++ F ++LI +YS
Sbjct: 110 --NNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYS---------- 157
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
VF G + +A +T + + + D VS+NT+I GY + E
Sbjct: 158 VF----------------------GNLNLA-RTLFDESLVRDLVSYNTMIKGYAEVNQPE 194
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKN--GLISNPFVSSG 299
L LF M +G+ +E TF + S C L K+IH+ V KN + SN + S
Sbjct: 195 SALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSA 254
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSI-SSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
IVD+Y KC +N AE + G S + SSM+ GY+ G + AR+ F+ + E++V+
Sbjct: 255 IVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVIS 314
Query: 359 WTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI-HAY 417
WTA+ SGY +A C +L E + G+ D + LV +L ACA A GK + H Y
Sbjct: 315 WTAMISGYSQAGQCSEALELFKE-MEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQY 373
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIE--RDLVLYNVMIACYAHHGHEE 475
I + L + ++DMY+KCG++ A IF+ + + ++N MIA A HG E
Sbjct: 374 IENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGE 433
Query: 476 KAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACM 535
AI +F E++ G+KPD VTFV +L A H G +E G+K F SM Y I P+ +HY CM
Sbjct: 434 TAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCM 493
Query: 536 IDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNK 595
+DL GR LE+A + ++ +P E ++VI + L+ CR + N ++ A +KLL +E +
Sbjct: 494 VDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHG 553
Query: 596 ARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTN 655
ARYV L+N+ A W E ++RK M + G S++ + IH F D SHP+
Sbjct: 554 ARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGK 613
Query: 656 AI 657
I
Sbjct: 614 EI 615
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 314 bits (805), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 198/661 (29%), Positives = 323/661 (48%), Gaps = 71/661 (10%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLI--HIYSKHNLLRESRKLFDEMPERNVFSWN 60
S LKE H + ++ GL + ++L S + L +R LFD++P+ N+++WN
Sbjct: 38 SKQLKEV---HARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQIPQPNLYTWN 94
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
T+I A S D P + V +F+++ E
Sbjct: 95 TLIRAYASSSD-----------PFQSFV---------------------IFLDLLDKCED 122
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
+ ++FT + +L G +H +K S + ++SL+ Y C A
Sbjct: 123 LP-NKFTFPFVIKAASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAE 181
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
R+F+G + C+ D VSWN++IS + Q
Sbjct: 182 RLFKGIS---------------CK------------------DVVSWNSMISAFAQGNCP 208
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
E+ L+LF++M V N T LSAC +++ + + S++ + G+ + + + +
Sbjct: 209 EDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAM 268
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
+D+Y KC +++ A+ + R+ FS + M+ GY+ G+ + AR F+++ K + W
Sbjct: 269 LDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWN 328
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
L S Y + + + +E + D + LV L ACA A+ G IH YI R
Sbjct: 329 VLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKR 388
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
G+ ++ LIS+LVDMY+KCG++ A +F + ERD+ +++ MIA HG + AI L
Sbjct: 389 EGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDL 448
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
F EM E +KP++VTF +L A H G V+ G +F+ M Y + PE HYACM+D+ G
Sbjct: 449 FFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILG 508
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQ 600
RA LE+A+E + + T A + G+ L C L+ N EL A ++LL+LE N V
Sbjct: 509 RAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVELGELASDQLLKLEPRNHGAIVL 568
Query: 601 LANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSV 660
L+N+YA G W ++ +RK MR + + GCS + +H F VGD +HP ++ IYS
Sbjct: 569 LSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSSIEANGNVHEFLVGDNTHPLSSNIYSK 628
Query: 661 L 661
L
Sbjct: 629 L 629
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 139/346 (40%), Gaps = 76/346 (21%)
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
N + + H S + C + +K E+H+ +L+ GL +PF
Sbjct: 19 NNLLFRNHQILSTIDKCSSSKQLK---EVHARMLRTGLFFDPF----------------- 58
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
+ S L +SFS ++ AR FD + + N+ W L Y + +
Sbjct: 59 SASKLFTASALSSFS------------TLDYARNLFDQIPQPNLYTWNTLIRAYASSSDP 106
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
F + + + K + + ++ A + A G +H +++ MD ++++
Sbjct: 107 FQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFGMDLYILNS 166
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
LV Y CG+++ AE +F+ +D+V +N MI+ +A E A+ LF +M + + P+
Sbjct: 167 LVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPN 226
Query: 493 AVTFVAILSA-----------------------------------FRHCGSVEMGEKYFN 517
+VT V +LSA + CGSV+ +K F+
Sbjct: 227 SVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFD 286
Query: 518 SMTADYKISPETD--HYACMIDLYGRANQLEKAIEFMKSIPTEEDA 561
M PE D + M+D Y + + A ++P +E A
Sbjct: 287 EM-------PERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIA 325
>gi|356540844|ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 748
Score = 314 bits (805), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 209/674 (31%), Positives = 339/674 (50%), Gaps = 48/674 (7%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
++ N +I Y +N++ E+ +LFD MPER+ FSW +I+ + L++AR L + P K
Sbjct: 80 VSWNTMIAGYLHNNMVEEASELFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDK 139
Query: 86 -DLVTYNSMLCGYINAEGYEADALKLFIEMQSAD---EHIRMDEFTVTSTLNLCVKLLNV 141
D +N+M+ GY +G DA K+F +M + D + + +T ++L ++
Sbjct: 140 LDTACWNAMIAGYAK-KGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFES 198
Query: 142 GFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAA 201
R + ++ + ++ Y K A ++FE N +S M+
Sbjct: 199 MTERNVVSWNL-------------MVAGYVKSGDLSSAWQLFEKIPNP-NAVSWVTMLCG 244
Query: 202 CCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG-ENGVRW--- 257
+ G+M A + F R P N VSWN +I+ YVQ+ +E +KLF +M ++ V W
Sbjct: 245 LAKYGKMAEARELFDRMPSKN-VVSWNAMIATYVQDLQVDEAVKLFKKMPHKDSVSWTTI 303
Query: 258 -NEHTFASALSACCGLRNVKCAKEIHSWV-LKNGLISNP--------FVSSGIVDVYC-- 305
N + L + N K+I + L +GLI N F G DV C
Sbjct: 304 INGYIRVGKLDEARQVYNQMPCKDITAQTALMSGLIQNGRIDEADQMFSRIGAHDVVCWN 363
Query: 306 -------KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
+ M+ A ++ ++NS S ++MI GY+ G M+ A F ++ EKN+V
Sbjct: 364 SMIAGYSRSGRMDEALNLFRQMPIKNSVSWNTMISGYAQAGQMDRATEIFQAMREKNIVS 423
Query: 359 WTALFSGYVKAQNCEALFDLLSEFVT--KEGVVTDALILVILLGACALQAALHPGKEIHA 416
W +L +G++ QN D L V KEG D L ACA AAL G ++H
Sbjct: 424 WNSLIAGFL--QN-NLYLDALKSLVMMGKEGKKPDQSTFACTLSACANLAALQVGNQLHE 480
Query: 417 YILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
YIL+ G D + + L+ MY+KCG + AE +F++ DL+ +N +I+ YA +G+ K
Sbjct: 481 YILKSGYMNDLFVGNALIAMYAKCGRVQSAEQVFRDIECVDLISWNSLISGYALNGYANK 540
Query: 477 AILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMI 536
A FE+M + + PD VTF+ +LSA H G G F M D+ I P +HY+C++
Sbjct: 541 AFKAFEQMSSERVVPDEVTFIGMLSACSHAGLANQGLDIFKCMIEDFAIEPLAEHYSCLV 600
Query: 537 DLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKA 596
DL GR +LE+A ++ + + +A + GS L CR+++N EL A E+L LE +N +
Sbjct: 601 DLLGRVGRLEEAFNTVRGMKVKANAGLWGSLLGACRVHKNLELGRFAAERLFELEPHNAS 660
Query: 597 RYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNA 656
Y+ L+N++A G W E+ R+R MRG + + GCSW+ V+++I F D + +
Sbjct: 661 NYITLSNMHAEAGRWEEVERVRMLMRGKRAGKQPGCSWIEVQNQIQHFLSHDPAKLRPKN 720
Query: 657 IYSVLAIFTGELYE 670
I +L + +
Sbjct: 721 IQIILNTLAAHMRD 734
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/429 (26%), Positives = 197/429 (45%), Gaps = 84/429 (19%)
Query: 23 LTTITTNQLIHIYSKHNLLRESRKLFDEMP------------------------------ 52
L T N +I Y+K +++K+F++MP
Sbjct: 140 LDTACWNAMIAGYAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFESM 199
Query: 53 -ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLF 111
ERNV SWN +++ +KS DL A LF+ P+ + V++ +MLCG + G A+A +LF
Sbjct: 200 TERNVVSWNLMVAGYVKSGDLSSAWQLFEKIPNPNAVSWVTMLCG-LAKYGKMAEARELF 258
Query: 112 IEMQS------------------ADEHIRM-------DEFTVTSTLNLCVKLLNVGFGRQ 146
M S DE +++ D + T+ +N +++ + RQ
Sbjct: 259 DRMPSKNVVSWNAMIATYVQDLQVDEAVKLFKKMPHKDSVSWTTIINGYIRVGKLDEARQ 318
Query: 147 LHAFMVKTSNDASGFAVSSLI---------DMYSKCRCYEEAC--RVFEGCT------EE 189
++ M A +S LI M+S+ ++ C + G + E
Sbjct: 319 VYNQMPCKDITAQTALMSGLIQNGRIDEADQMFSRIGAHDVVCWNSMIAGYSRSGRMDEA 378
Query: 190 VNL---------ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+NL +S N M++ + G+M+ A + F E N VSWN+LI+G++QN
Sbjct: 379 LNLFRQMPIKNSVSWNTMISGYAQAGQMDRATEIFQAMREKN-IVSWNSLIAGFLQNNLY 437
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
+ LK V MG+ G + ++ TFA LSAC L ++ ++H ++LK+G +++ FV + +
Sbjct: 438 LDALKSLVMMGKEGKKPDQSTFACTLSACANLAALQVGNQLHEYILKSGYMNDLFVGNAL 497
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
+ +Y KC + AE + + S +S+I GY+L G +A + F+ ++ + VV
Sbjct: 498 IAMYAKCGRVQSAEQVFRDIECVDLISWNSLISGYALNGYANKAFKAFEQMSSERVVPDE 557
Query: 361 ALFSGYVKA 369
F G + A
Sbjct: 558 VTFIGMLSA 566
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 128/492 (26%), Positives = 242/492 (49%), Gaps = 44/492 (8%)
Query: 30 QLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVT 89
Q+I + K + E+ ++F M +N+ ++N++IS K+ ++ AR LFD ++LV+
Sbjct: 23 QIIQL-GKLGKVEEAIRIFFNMTHKNLVTYNSMISVLAKNARIRDARQLFDQMSLRNLVS 81
Query: 90 YNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHA 149
+N+M+ GY++ E +A +LF D D F+ + + + R+L
Sbjct: 82 WNTMIAGYLHNNMVE-EASELF------DVMPERDNFSWALMITCYTRKGKLEKARELLE 134
Query: 150 FMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEME 209
+ + A +++I Y+K + +A +VFE + +L+S N+M+A + G+M
Sbjct: 135 LVPDKLDTA---CWNAMIAGYAKKGQFNDAKKVFEQMPAK-DLVSYNSMLAGYTQNGKMH 190
Query: 210 MALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM-GENGVRWNEHTFASALSA 268
+AL+ F E N VSWN +++GYV++GD +LF ++ N V W ++
Sbjct: 191 LALQFFESMTERN-VVSWNLMVAGYVKSGDLSSAWQLFEKIPNPNAVSW--------VTM 241
Query: 269 CCGLRNVKCAKEIHSWVLKNGLISNPFVS-SGIVDVYCKCENMNYAESMLLLKGV--RNS 325
CGL K K + L + + S VS + ++ Y +++ E++ L K + ++S
Sbjct: 242 LCGL--AKYGKMAEARELFDRMPSKNVVSWNAMIATY--VQDLQVDEAVKLFKKMPHKDS 297
Query: 326 FSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTK 385
S +++I GY G ++EAR+ ++ + K++ TAL SG ++ + + S
Sbjct: 298 VSWTTIINGYIRVGKLDEARQVYNQMPCKDITAQTALMSGLIQNGRIDEADQMFSRIGAH 357
Query: 386 EGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMD-KKLIS--TLVDMYSKCGN 442
+ V +++I G+ A L + QM K +S T++ Y++ G
Sbjct: 358 DVVCWNSMI----------AGYSRSGRMDEA--LNLFRQMPIKNSVSWNTMISGYAQAGQ 405
Query: 443 MTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
M A IFQ E+++V +N +IA + + A+ M ++G KPD TF LSA
Sbjct: 406 MDRATEIFQAMREKNIVSWNSLIAGFLQNNLYLDALKSLVMMGKEGKKPDQSTFACTLSA 465
Query: 503 FRHCGSVEMGEK 514
+ ++++G +
Sbjct: 466 CANLAALQVGNQ 477
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/308 (19%), Positives = 126/308 (40%), Gaps = 64/308 (20%)
Query: 323 RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK---AQNCEALFDLL 379
+++F+ + I+ G +EEA R F ++T KN+V + ++ S K ++ LFD +
Sbjct: 15 KHAFNHNRQIIQLGKLGKVEEAIRIFFNMTHKNLVTYNSMISVLAKNARIRDARQLFDQM 74
Query: 380 S--EFVTKEGVVT---------------------DALILVILLGACALQAALHPGKEIHA 416
S V+ ++ D +++ + L +E+
Sbjct: 75 SLRNLVSWNTMIAGYLHNNMVEEASELFDVMPERDNFSWALMITCYTRKGKLEKARELLE 134
Query: 417 YILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
+ ++D + ++ Y+K G A+ +F+ +DLV YN M+A Y +G
Sbjct: 135 LVPD---KLDTACWNAMIAGYAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHL 191
Query: 477 AILLFEEMLEKGI---------------------------KPDAVTFVAILSAFRHCGSV 509
A+ FE M E+ + P+AV++V +L G +
Sbjct: 192 ALQFFESMTERNVVSWNLMVAGYVKSGDLSSAWQLFEKIPNPNAVSWVTMLCGLAKYGKM 251
Query: 510 EMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEED---AVILGS 566
+ F+ M + +S + MI Y + Q+++A++ K +P ++ I+
Sbjct: 252 AEARELFDRMPSKNVVS-----WNAMIATYVQDLQVDEAVKLFKKMPHKDSVSWTTIING 306
Query: 567 FLNVCRLN 574
++ V +L+
Sbjct: 307 YIRVGKLD 314
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 314 bits (805), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 194/619 (31%), Positives = 318/619 (51%), Gaps = 69/619 (11%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
+V+ N +I+ ++ A +F S KD V++N++L G + + Y +DA+ F +M
Sbjct: 285 DVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMY-SDAINHFQDM 343
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
Q + + + D+ +V + + + N+ G ++HA+ +K D++ +SLIDMY KC
Sbjct: 344 QDSGQ--KPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCC 401
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
C + FE E+ D +SW T+I+GY
Sbjct: 402 CVKYMGSAFEYMPEK---------------------------------DLISWTTIIAGY 428
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
QN + L L ++ + + S L AC GL++ K KEIH +VLK GL ++
Sbjct: 429 AQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGL-ADI 487
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
+ + IV+VY + ++YA R F+S+ K
Sbjct: 488 LIQNAIVNVYGELALVDYA-------------------------------RHVFESINSK 516
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
++V WT++ + V +L + + + + D + LV +L A A ++L GKEI
Sbjct: 517 DIVSWTSMITCCVHNGLAIEALELFNSLI-ETNIEPDLITLVSVLYAAAALSSLKKGKEI 575
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
H +++R G ++ + ++LVDMY++CG M A IF +RDL+L+ MI HG
Sbjct: 576 HGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCG 635
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC 534
+ AI LF +M ++ + PD +TF+A+L A H G V G+++F M +YK+ P +HYAC
Sbjct: 636 KDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYAC 695
Query: 535 MIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNN 594
++DL R+N LE+A F++++P E A + + L CR++ N +L A +KLL+L N
Sbjct: 696 LVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLLQLNTEN 755
Query: 595 KARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKT 654
YV ++N +AA+G W ++ +R M+G K + GCSW+ VE++IH F D SHP+
Sbjct: 756 SGNYVLVSNTFAADGRWNDVEEVRSIMKGNKLKKKPGCSWIEVENKIHTFMARDKSHPQC 815
Query: 655 NAIYSVLAIFTGELYEIAG 673
N IY LA FT L E G
Sbjct: 816 NNIYLKLAQFTKLLKEKGG 834
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 122/477 (25%), Positives = 205/477 (42%), Gaps = 103/477 (21%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLV 88
+ +H+Y K ++ K+FD+M ER +F+W
Sbjct: 86 TKFVHMYGKCGSFYDAVKVFDKMSERTIFTW----------------------------- 116
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLH 148
N+M+ ++A Y +A++L+ EM+ + +D FT L C G ++H
Sbjct: 117 --NAMIGACVSAGRY-VEAIELYKEMRVLG--VSLDAFTFPCVLKACGAFKERRLGCEIH 171
Query: 149 AFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE-GCTEEVNLISKNAMVAACCREGE 207
VK F ++LI MY+KC A +F+ G E+ + +S N++++A EGE
Sbjct: 172 GVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGE 231
Query: 208 MEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALS 267
+ E L LF RM E GV N +TF SAL
Sbjct: 232 --------------------------------SLEALSLFRRMQEVGVESNTYTFVSALQ 259
Query: 268 ACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFS 327
AC G +K + IH+ +LK+ ++ +VS+ ++ +Y C
Sbjct: 260 ACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANC-------------------- 299
Query: 328 ISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF--VTK 385
G ME+A R F S+ K+ V W L SG V QN + D ++ F +
Sbjct: 300 -----------GQMEDAERVFKSMLFKDCVSWNTLLSGMV--QN-DMYSDAINHFQDMQD 345
Query: 386 EGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTY 445
G D + ++ ++ A A L G E+HAY ++ G+ + + ++L+DMY KC + Y
Sbjct: 346 SGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKY 405
Query: 446 AEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
F+ E+DL+ + +IA YA + A+ L ++ + + D + +IL A
Sbjct: 406 MGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLA 462
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 115/458 (25%), Positives = 194/458 (42%), Gaps = 83/458 (18%)
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSND-ASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
+ L LC + G+QLHA +KT N S F + + MY KC + +A +VF+
Sbjct: 50 SQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFD--- 106
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
+M+ +T + +WN +I V G E ++L+
Sbjct: 107 ---------------------KMSERTIF---------TWNAMIGACVSAGRYVEAIELY 136
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
M GV + TF L AC + + EIH +K G FV + ++ +Y KC
Sbjct: 137 KEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKC 196
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS-LTEK-NVVVWTALFSG 365
G++ AR FDS L EK + V W ++ S
Sbjct: 197 -------------------------------GDLGGARVLFDSGLMEKDDPVSWNSIISA 225
Query: 366 YV-KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
+V + ++ EAL L + + GV ++ V L AC + G+ IHA IL+
Sbjct: 226 HVGEGESLEALS--LFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHF 283
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
D + + L+ MY+ CG M AE +F++ + +D V +N +++ + AI F++M
Sbjct: 284 TDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDM 343
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGR--- 541
+ G KPD V+ + +++A ++ G + ++ + I +ID+YG+
Sbjct: 344 QDSGQKPDQVSVLNMIAASGRSANLLAGME-VHAYAIKHGIDSNMHIGNSLIDMYGKCCC 402
Query: 542 ANQLEKAIEFMKSIPTEED-----AVILGSFLNVCRLN 574
+ A E+M E+D +I G N C L+
Sbjct: 403 VKYMGSAFEYMP----EKDLISWTTIIAGYAQNECHLD 436
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 107/477 (22%), Positives = 197/477 (41%), Gaps = 105/477 (22%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
RS NL + H AIK G+ N LI +Y K ++ F+ MPE+++ SW T
Sbjct: 364 RSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTT 423
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
II+ GY E + DAL L ++Q E +
Sbjct: 424 IIA-------------------------------GYAQNECH-LDALNLLRKVQL--EKM 449
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+D + S L C L + +++H +++K A ++++++Y + + A
Sbjct: 450 DVDPMMIGSILLACSGLKSEKLIKEIHGYVLK-GGLADILIQNAIVNVYGELALVDYARH 508
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
VFE + D VSW ++I+ V NG A
Sbjct: 509 VFESINSK---------------------------------DIVSWTSMITCCVHNGLAI 535
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E L+LF + E + + T S L A L ++K KEIH ++++ G +++ +V
Sbjct: 536 EALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLV 595
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D+Y +C G ME AR F+ + ++++++WT+
Sbjct: 596 DMYARC-------------------------------GTMENARNIFNYVKQRDLILWTS 624
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+ + + DL S+ +T E V+ D + + LL AC+ + GK+ H I++
Sbjct: 625 MINANGMHGCGKDAIDLFSK-MTDENVLPDHITFLALLYACSHSGLVVEGKQ-HFEIMKN 682
Query: 422 GVQMD--KKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMI-ACYAHHGHE 474
+++ + + LVD+ ++ ++ A +N IE ++ ++ AC H ++
Sbjct: 683 EYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHSNND 739
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 176/601 (29%), Positives = 317/601 (52%), Gaps = 44/601 (7%)
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEAD-ALKLFIEMQSADEHIRMDEFTVTS 130
L+ AR +FD P + +N+++ Y A G + ++ F++M S + +++T
Sbjct: 80 LEYARKVFDEIPKPNSFAWNTLIRAY--ASGPDPVLSIWAFLDMVS-ESQCYPNKYTFPF 136
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
+ ++ ++ G+ LH VK++ + F +SLI Y C + AC+VF E+
Sbjct: 137 LIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEK- 195
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
D VSWN++I+G+VQ G ++ L+LF +M
Sbjct: 196 --------------------------------DVVSWNSMINGFVQKGSPDKALELFKKM 223
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
V+ + T LSAC +RN++ +++ S++ +N + N +++ ++D+Y KC ++
Sbjct: 224 ESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSI 283
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
A+ + +++ + ++M+ GY++ + E AR +S+ +K++V W AL S Y +
Sbjct: 284 EDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNG 343
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
+ E ++ + + + LV L ACA AL G+ IH+YI + G++M+ +
Sbjct: 344 KPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVT 403
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
S L+ MYSKCG++ + +F + +RD+ +++ MI A HG +A+ +F +M E +K
Sbjct: 404 SALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVK 463
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
P+ VTF + A H G V+ E F+ M ++Y I PE HYAC++D+ GR+ LEKA++
Sbjct: 464 PNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVK 523
Query: 551 FMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGN 610
F++++P + G+ L C+++ N LA A +LL LE N +V L+N+YA G
Sbjct: 524 FIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGK 583
Query: 611 WAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYE 670
W + +RK MR + GCS + ++ IH F GD +HP + +Y G+L+E
Sbjct: 584 WENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVY-------GKLHE 636
Query: 671 I 671
+
Sbjct: 637 V 637
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 180/366 (49%), Gaps = 43/366 (11%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTI 62
SL+L ++L H A+K+ + N LIH Y L + K+F + E++V SWN++
Sbjct: 146 SLSLGQSL--HGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSM 203
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
I+ ++ SP K AL+LF +M+S D ++
Sbjct: 204 INGFVQK-----------GSPDK---------------------ALELFKKMESED--VK 229
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
T+ L+ C K+ N+ FGRQ+ +++ + + + ++++DMY+KC E+A R+
Sbjct: 230 ASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRL 289
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
F+ E+ N ++ M+ + E A + P+ D V+WN LIS Y QNG E
Sbjct: 290 FDAMEEKDN-VTWTTMLDGYAISEDYEAAREVLNSMPQ-KDIVAWNALISAYEQNGKPNE 347
Query: 243 GLKLFVRMG-ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
L +F + + ++ N+ T S LSAC + ++ + IHS++ K+G+ N V+S ++
Sbjct: 348 ALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALI 407
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNV----V 357
+Y KC ++ + + R+ F S+MI G ++ G EA F + E NV V
Sbjct: 408 HMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGV 467
Query: 358 VWTALF 363
+T +F
Sbjct: 468 TFTNVF 473
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 153/335 (45%), Gaps = 38/335 (11%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
+R+L + +++ + + LT N ++ +Y+K + ++++LFD M E++ +W
Sbjct: 245 IRNLEFGRQVCSYIEENRVNVNLTL--ANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWT 302
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
T++ S D + AR + +S P KD+V +N+++ Y G +AL +F E+Q ++
Sbjct: 303 TMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAY-EQNGKPNEALIVFHELQ-LQKN 360
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
+++++ T+ STL+ C ++ + GR +H+++ K + S+LI MYSKC E++
Sbjct: 361 MKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSR 420
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
VF E D W+ +I G +G
Sbjct: 421 EVFNSV---------------------------------EKRDVFVWSAMIGGLAMHGCG 447
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKN-GLISNPFVSSG 299
E + +F +M E V+ N TF + AC V A+ + + N G++ +
Sbjct: 448 NEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYAC 507
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVG 334
IVDV + + A + + S S+ ++G
Sbjct: 508 IVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLG 542
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 157/395 (39%), Gaps = 86/395 (21%)
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
S + C LR +K + H +++ G S+P Y+ S L
Sbjct: 35 SLIERCVSLRQLK---QTHGHMIRTGTFSDP-----------------YSASKLFAMAAL 74
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV 383
+SF+ ++E AR+ FD + + N W L Y + + V
Sbjct: 75 SSFA------------SLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMV 122
Query: 384 TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNM 443
++ + L+ A A ++L G+ +H ++ V D + ++L+ Y CG++
Sbjct: 123 SESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDL 182
Query: 444 TYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA- 502
A +F E+D+V +N MI + G +KA+ LF++M + +K VT V +LSA
Sbjct: 183 DSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSAC 242
Query: 503 ----------------------------------FRHCGSVEMGEKYFNSMTADYKISPE 528
+ CGS+E ++ F++M ++
Sbjct: 243 AKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVT-- 300
Query: 529 TDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKL- 587
+ M+D Y + E A E + S+P ++D V + ++ N G+ E L
Sbjct: 301 ---WTTMLDGYAISEDYEAAREVLNSMP-QKDIVAWNALISAYEQN------GKPNEALI 350
Query: 588 ----LRLEGNNKARYVQLANVYA--AEGNWAEMGR 616
L+L+ N K + L + + A+ E+GR
Sbjct: 351 VFHELQLQKNMKLNQITLVSTLSACAQVGALELGR 385
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 198/625 (31%), Positives = 314/625 (50%), Gaps = 51/625 (8%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHK---DLVTYNSMLCGYINAEGYEADALKLF 111
NVF N+I++ + L A +FD + D+V++NS+L Y+ G AL++
Sbjct: 161 NVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQG-GQSRTALRIA 219
Query: 112 IEMQSA-DEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMY 170
M + +R D T+ + L C + + G+Q+H F V+ F ++L+ MY
Sbjct: 220 FRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMY 279
Query: 171 SKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN---DAVSW 227
+KC EA +VFEG ++ +++S NAMV + G + AL F E + D ++W
Sbjct: 280 AKCSKMNEANKVFEGIKKK-DVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITW 338
Query: 228 NTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLK 287
+ +I+GY Q G E L +F +M G+ N T AS LS C + + K+ H++V+K
Sbjct: 339 SAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIK 398
Query: 288 NGLISN-------PFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGN 340
N L N V +G++D+Y KC++ A S+
Sbjct: 399 NILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSI------------------------ 434
Query: 341 MEEARRHFDSL--TEKNVVVWTALFSGYVKAQNCEALFDLLSE-FVTKEGVVTDALILVI 397
FDS+ +KNVV WT + GY + L ++ F K + +A L
Sbjct: 435 -------FDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSC 487
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQMDKKLIST-LVDMYSKCGNMTYAEIIFQNFIER 456
L ACA L G+++HAY LR + + + L+DMYSK G++ A +F N R
Sbjct: 488 ALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLR 547
Query: 457 DLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYF 516
++V + ++ Y HG E+A+ LF++M + G D +TF+ +L A H G V+ G YF
Sbjct: 548 NVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYF 607
Query: 517 NSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRN 576
+ M + I+P +HYACM+DL GRA +L +A+E +K++ E AV+ + L+ R++ N
Sbjct: 608 HDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHAN 667
Query: 577 AELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVY 636
EL A KL L N Y L+N+YA W ++ RIR M+ + GCSW+
Sbjct: 668 IELGEYAASKLTELGAENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWIQ 727
Query: 637 VEHEIHIFTVGDVSHPKTNAIYSVL 661
+ F VGD SHP++ IY++L
Sbjct: 728 GKKSTTTFFVGDRSHPESEQIYNLL 752
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/468 (25%), Positives = 219/468 (46%), Gaps = 57/468 (12%)
Query: 102 GYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGF 161
G D L + +MQ D +T L C ++ ++ G +HA + ++ F
Sbjct: 106 GLLDDTLGFYCQMQRLG--WLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVF 163
Query: 162 AVSSLIDMYSKCRCYEEACRVFEGCTEEV--NLISKNAMVAACCREGEMEMALKTFWRQP 219
+S++ MY +C ++A ++F+ E +++S N+++AA
Sbjct: 164 ICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAA------------------ 205
Query: 220 ELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGEN---GVRWNEHTFASALSACCGLRNVK 276
YVQ G + L++ RMG + +R + T + L AC + ++
Sbjct: 206 --------------YVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQ 251
Query: 277 CAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYS 336
K++H + ++NGL+ + FV + +V +Y KC MN A + ++ S ++M+ GYS
Sbjct: 252 HGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYS 311
Query: 337 LQGNMEEARRHFDSLTEK----NVVVWTALFSGYV-KAQNCEALFDLLSEFVTKEGVVTD 391
G+ + A F + E+ +V+ W+A+ +GY K EAL D+ + + G+ +
Sbjct: 312 QIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEAL-DVFRQ-MQLYGLEPN 369
Query: 392 ALILVILLGACALQAALHPGKEIHAYILRMGVQM-------DKKLISTLVDMYSKCGNMT 444
+ L LL CA AL GK+ HAY+++ + + D +++ L+DMY+KC +
Sbjct: 370 VVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYR 429
Query: 445 YAEIIFQNFIERD--LVLYNVMIACYAHHGHEEKAILLFEEMLEK--GIKPDAVTFVAIL 500
A IF + +D +V + VMI YA HG A+ LF ++ ++ +KP+A T L
Sbjct: 430 VARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCAL 489
Query: 501 SAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
A G + +G + + S C+ID+Y ++ ++ A
Sbjct: 490 MACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAA 537
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 119/549 (21%), Positives = 236/549 (42%), Gaps = 121/549 (22%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +++ GL N L+ +Y+K + + E+ K+F+ + +++V SWN +++ +
Sbjct: 257 HGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSF 316
Query: 73 KQARSLFDSSPHKDL----VTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
A SLF +D+ +T+++++ GY +G+ +AL +F +MQ + + T+
Sbjct: 317 DSALSLFKMMQEEDIKLDVITWSAVIAGYAQ-KGHGFEALDVFRQMQLYG--LEPNVVTL 373
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTS-----NDASG--FAVSSLIDMYSKCRCYEEACR 181
S L+ C + + +G+Q HA+++K ND ++ LIDMY+KC+ Y A
Sbjct: 374 ASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARS 433
Query: 182 VFEGC-TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+F+ ++ N+++ M+ + GE A
Sbjct: 434 IFDSIEGKDKNVVTWTVMIGGYAQHGE--------------------------------A 461
Query: 241 EEGLKLFVRM--GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP-FVS 297
+ LKLF ++ + ++ N T + AL AC L ++ +++H++ L+N S +V
Sbjct: 462 NDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVG 521
Query: 298 SGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVV 357
+ ++D+Y K +++ A ++ +RN S +S++ GY + G EEA FD +
Sbjct: 522 NCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQM------ 575
Query: 358 VWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK-EIHA 416
K G D + +++L AC+ + G H
Sbjct: 576 --------------------------QKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHD 609
Query: 417 YILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
+ G+ + + +VD+ + G + A + +N
Sbjct: 610 MVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNM----------------------- 646
Query: 477 AILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD-HYACM 535
++P AV +VA+LSA R ++E+GE + +T ++ E D Y +
Sbjct: 647 -----------SMEPTAVVWVALLSASRIHANIELGEYAASKLT---ELGAENDGSYTLL 692
Query: 536 IDLYGRANQ 544
+LY A +
Sbjct: 693 SNLYANARR 701
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 196/437 (44%), Gaps = 66/437 (15%)
Query: 219 PELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCA 278
P + WN LI V+ G ++ L + +M G + +TF L AC + +++
Sbjct: 87 PSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHG 146
Query: 279 KEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQ 338
+H+ V NGL SN F+ + IV +Y +C
Sbjct: 147 ASVHAIVCANGLGSNVFICNSIVAMYGRC------------------------------- 175
Query: 339 GNMEEARRHFDSLTEK---NVVVWTALFSGYVK-AQNCEAL---FDLLSEFVTKEGVVTD 391
G +++A + FD + E+ ++V W ++ + YV+ Q+ AL F + + + K + D
Sbjct: 176 GALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLK--LRPD 233
Query: 392 ALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQ 451
A+ LV +L ACA AL GK++H + +R G+ D + + LV MY+KC M A +F+
Sbjct: 234 AITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFE 293
Query: 452 NFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEM 511
++D+V +N M+ Y+ G + A+ LF+ M E+ IK D +T+ A+++ + G
Sbjct: 294 GIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFE 353
Query: 512 GEKYFNSMTADYKISPETDHYACMID--------LYGRANQ--LEKAIEFMKSIPTEEDA 561
F M Y + P A ++ LYG+ + K I + E+D
Sbjct: 354 ALDVFRQMQL-YGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDL 412
Query: 562 VILGSFLNV---CRLNRNAELAGEAEEKLLRLEGNNK--ARYVQLANVYAAEGNWAE--- 613
++L +++ C+ R A ++ +EG +K + + YA G +
Sbjct: 413 LVLNGLIDMYAKCKSYRVARSIFDS------IEGKDKNVVTWTVMIGGYAQHGEANDALK 466
Query: 614 -MGRIRKQMRGMKGNRF 629
+I KQ +K N F
Sbjct: 467 LFAQIFKQKTSLKPNAF 483
>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 857
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 186/610 (30%), Positives = 308/610 (50%), Gaps = 69/610 (11%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N+++S K A LF D VT+N M+ GY+ + G ++L F EM S+
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQS-GLMEESLTFFYEMISSG- 335
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
+ D T +S L K N+ + +Q+H ++++ S F S+LID Y KCR A
Sbjct: 336 -VLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMA 394
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
+F C D V + +ISGY+ NG
Sbjct: 395 QNIFSQCNSV---------------------------------DVVVFTAMISGYLHNGL 421
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
+ L++F + + + NE T S L L +K +E+H +++K G + +
Sbjct: 422 YIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCA 481
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
++D+Y KC MN A + F+ L+++++V W
Sbjct: 482 VIDMYAKCGRMNLAYEI-------------------------------FERLSKRDIVSW 510
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
++ + ++ N A D+ + + G+ D + + L ACA + GK IH +++
Sbjct: 511 NSMITRCAQSDNPSAAIDIFRQ-MGVSGICYDCVSISAALSACANLPSESFGKAIHGFMI 569
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
+ + D STL+DMY+KCGN+ A +F+ E+++V +N +IA +HG + ++
Sbjct: 570 KHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLC 629
Query: 480 LFEEMLEK-GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
LF EM+EK GI+PD +TF+ I+S+ H G V+ G ++F SMT DY I P+ +HYAC++DL
Sbjct: 630 LFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDL 689
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARY 598
+GRA +L +A E +KS+P DA + G+ L CRL++N ELA A KL+ L+ +N Y
Sbjct: 690 FGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYY 749
Query: 599 VQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
V ++N +A W + ++R M+ + + G SW+ + H+F GDV+HP+++ IY
Sbjct: 750 VLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIY 809
Query: 659 SVLAIFTGEL 668
S+L GEL
Sbjct: 810 SLLNSLLGEL 819
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 139/520 (26%), Positives = 235/520 (45%), Gaps = 76/520 (14%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
N F +++I A ++ + LFD KD V +N ML GY ++ +K F M
Sbjct: 172 NEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDS-VIKGFSVM 230
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
+ + I + T L++C L + G QLH +V + D G +SL+ MYSKC
Sbjct: 231 RM--DQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCG 288
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
+++A ++F R D V+WN +ISGY
Sbjct: 289 RFDDASKLF---------------------------------RMMSRADTVTWNCMISGY 315
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
VQ+G EE L F M +GV + TF+S L + N++ K+IH +++++ + +
Sbjct: 316 VQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDI 375
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
F++S ++D Y KC ++ A+++ F
Sbjct: 376 FLTSALIDAYFKCRGVSMAQNI-------------------------------FSQCNSV 404
Query: 355 NVVVWTALFSGYVKAQNCEALF-DLLSEF--VTKEGVVTDALILVILLGACALQAALHPG 411
+VVV+TA+ SGY+ L+ D L F + K + + + LV +L + AL G
Sbjct: 405 DVVVFTAMISGYLH----NGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLG 460
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
+E+H +I++ G + ++DMY+KCG M A IF+ +RD+V +N MI A
Sbjct: 461 RELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQS 520
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH 531
+ AI +F +M GI D V+ A LSA + S G K + + ++ +
Sbjct: 521 DNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFG-KAIHGFMIKHSLASDVYS 579
Query: 532 YACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVC 571
+ +ID+Y + L+ A+ K++ E++ V S + C
Sbjct: 580 ESTLIDMYAKCGNLKAAMNVFKTM-KEKNIVSWNSIIAAC 618
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 111/481 (23%), Positives = 208/481 (43%), Gaps = 84/481 (17%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKL----FDEMPERNVFSWNT 61
++E+L + I +G+ IT + L+ SK L +++ ++F +
Sbjct: 321 MEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSA 380
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I A K + A+++F D+V + +M+ GY++ G D+L++F + I
Sbjct: 381 LIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLH-NGLYIDSLEMFRWLVKV--KI 437
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+E T+ S L + LL + GR+LH F++K D ++IDMY+KC
Sbjct: 438 SPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKC-------- 489
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
G M +A + F R + D VSWN++I+ Q+ +
Sbjct: 490 ------------------------GRMNLAYEIFERLSK-RDIVSWNSMITRCAQSDNPS 524
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
+ +F +MG +G+ ++ + ++ALSAC L + K IH +++K+ L S+ + S ++
Sbjct: 525 AAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLI 584
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D+Y KC GN++ A F ++ EKN+V W +
Sbjct: 585 DMYAKC-------------------------------GNLKAAMNVFKTMKEKNIVSWNS 613
Query: 362 LFS-----GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG-KEIH 415
+ + G +K C L E V K G+ D + + ++ +C + G +
Sbjct: 614 IIAACGNHGKLKDSLC-----LFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFR 668
Query: 416 AYILRMGVQMDKKLISTLVDMYSKCGNMT--YAEIIFQNFIERDLVLYNVMIACYAHHGH 473
+ G+Q ++ + +VD++ + G +T Y + F V ++ AC H
Sbjct: 669 SMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNV 728
Query: 474 E 474
E
Sbjct: 729 E 729
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/362 (19%), Positives = 130/362 (35%), Gaps = 83/362 (22%)
Query: 252 ENGVRWNEHTFASALS----ACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
N R+ E T LS AC ++ K++H++++ N + + + I+ +Y C
Sbjct: 24 RNSSRFLEETIPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMC 83
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
+ + M +R S ++ W ++ S +V
Sbjct: 84 GSFSDCGKMFYRLDLRRS-----------------------------SIRPWNSIISSFV 114
Query: 368 KAQNCEALFDLLSEFVTKE---GVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
+ L + F K GV D L+ AC + + +G+
Sbjct: 115 R----NGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMD 170
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
++ + S+L+ Y + G + +F +++D V++NVM+ YA G + I F M
Sbjct: 171 CNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVM 230
Query: 485 LEKGIKPDAVTFVAILSA-----------------------------------FRHCGSV 509
I P+AVTF +LS + CG
Sbjct: 231 RMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRF 290
Query: 510 EMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF---MKSIPTEEDAVILGS 566
+ K F M+ +T + CMI Y ++ +E+++ F M S DA+ S
Sbjct: 291 DDASKLFRMMS-----RADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSS 345
Query: 567 FL 568
L
Sbjct: 346 LL 347
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 184/614 (29%), Positives = 312/614 (50%), Gaps = 69/614 (11%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N I+ D R LF ++ +N+M+ G ++ + ++ DA++ + M+S E
Sbjct: 50 NMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFD-DAIEFYGLMRS--E 106
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
+ FT L C +LL++ G ++H +VK D F +SL+ +Y+KC E+A
Sbjct: 107 GFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDA 166
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
+VF+ ++ + VSW +ISGY+ G
Sbjct: 167 HKVFDDIPDK---------------------------------NVVSWTAIISGYIGVGK 193
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
E + +F R+ E + + T LSAC L ++ + IH +++ G++ N FV +
Sbjct: 194 FREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTS 253
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
+VD+Y KC GNME+AR FD + EK++V W
Sbjct: 254 LVDMYAKC-------------------------------GNMEKARSVFDGMPEKDIVSW 282
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
A+ GY + DL + + +E V D +V +L ACA AL G+ + +
Sbjct: 283 GAMIQGYALNGLPKEAIDLFLQ-MQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVD 341
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
R + L + L+D+Y+KCG+M+ A +F+ E+D V++N +I+ A +G+ + +
Sbjct: 342 RNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFG 401
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
LF ++ + GIKPD TF+ +L H G V+ G +YFNSM + ++P +HY CM+DL
Sbjct: 402 LFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLL 461
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYV 599
GRA L++A + ++++P E +A++ G+ L CR++R+ +LA A ++L+ LE N YV
Sbjct: 462 GRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYV 521
Query: 600 QLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYS 659
L+N+Y+A W E ++R M + + GCSW+ V+ +H F VGD HP + IY+
Sbjct: 522 LLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYA 581
Query: 660 VLAIFTGELYEIAG 673
L T ++ ++AG
Sbjct: 582 KLDELTKKM-KVAG 594
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/487 (22%), Positives = 195/487 (40%), Gaps = 101/487 (20%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R L+L+ + H +K G L+ +Y+K L ++ K+FD++P++NV SW
Sbjct: 124 RLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTA 183
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
IIS I ++A +F + +EM A
Sbjct: 184 IISGYIGVGKFREAIDMF-----------------------------RRLLEMNLAP--- 211
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
D FT+ L+ C +L ++ G +H +++ + F +SL+DMY+KC E+A
Sbjct: 212 --DSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARS 269
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
VF+G E+ D VSW +I GY NG +
Sbjct: 270 VFDGMPEK---------------------------------DIVSWGAMIQGYALNGLPK 296
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E + LF++M V+ + +T LSAC L ++ + + V +N + NP + + ++
Sbjct: 297 EAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALI 356
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D+Y KC G+M A F + EK+ VVW A
Sbjct: 357 DLYAKC-------------------------------GSMSRAWEVFKGMKEKDRVVWNA 385
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR- 420
+ SG + F L + V K G+ D + LL C + G+ + R
Sbjct: 386 IISGLAMNGYVKISFGLFGQ-VEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRF 444
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKAIL 479
+ + +VD+ + G + A + +N +E + +++ ++ H + A L
Sbjct: 445 FSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAEL 504
Query: 480 LFEEMLE 486
++++E
Sbjct: 505 ALKQLIE 511
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 199/737 (27%), Positives = 362/737 (49%), Gaps = 110/737 (14%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTI 62
SLN + H+ +K G T +N ++ + + L + ++FD+MP +N S N +
Sbjct: 23 SLNSNHLIDAHI--VKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMM 80
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
IS +K L +AR LFD + V++ ++ GY+ + +A +L+ +M+ I
Sbjct: 81 ISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQS-NQSKEAFRLYADMRRGG--IE 137
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
D T+ + L+ +L Q+H ++K + + +SL+D Y K C A ++
Sbjct: 138 PDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQL 197
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
F+ ++++K D V++N+L++GY G EE
Sbjct: 198 FK------HMLNK---------------------------DTVTFNSLMTGYSNEGLNEE 224
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
++LF+ + +G++ ++ TFA+ LSA GL + K +++H +VLK + N FV + ++D
Sbjct: 225 AIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLD 284
Query: 303 VYCKCE-----------------------------NMNYAESMLLLKGV------RNSFS 327
Y K + N + ES L + + R F
Sbjct: 285 YYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFP 344
Query: 328 ISSMI---------------------VGYSLQGNME--------------EARRHFDSLT 352
++++ VG + + +E EA++ FD++
Sbjct: 345 FATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIA 404
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
K+ V WTA+ S YV+ E ++ S+ + + GV D +L ACA A++ G+
Sbjct: 405 CKSTVPWTAMISAYVQKGKHEEGINVFSD-MRRTGVPADQATFASILRACANLASISLGR 463
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
++H+ ++R G + S L+D Y+KCG MT A F ER+ V +N +I+ YA +G
Sbjct: 464 QLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNG 523
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
+ + + F++M++ G KPD+V+F+++LSA HCG VE +FNSMT Y+++P+ +HY
Sbjct: 524 NVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHY 583
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
M+D+ R + ++A + M +P E ++ S LN CR+++N ELA +A ++L +E
Sbjct: 584 TSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMED 643
Query: 593 -NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSH 651
+ A Y+ ++N+YA G W + +++K MR + SWV ++H+ H+F+ D SH
Sbjct: 644 LRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSH 703
Query: 652 PKTNAIYSVLAIFTGEL 668
P+ I + + E+
Sbjct: 704 PEMKKILRKINALSKEM 720
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 199/737 (27%), Positives = 362/737 (49%), Gaps = 110/737 (14%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTI 62
SLN + H+ +K G T +N ++ + + L + ++FD+MP +N S N +
Sbjct: 23 SLNSNHLIDAHI--VKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMM 80
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
IS +K L +AR LFD + V++ ++ GY+ + +A +L+ +M+ I
Sbjct: 81 ISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQS-NQSKEAFRLYADMRRGG--IE 137
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
D T+ + L+ +L Q+H ++K + + +SL+D Y K C A ++
Sbjct: 138 PDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQL 197
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
F+ ++++K D V++N+L++GY G EE
Sbjct: 198 FK------HMLNK---------------------------DTVTFNSLMTGYSNEGLNEE 224
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
++LF+ + +G++ ++ TFA+ LSA GL + K +++H +VLK + N FV + ++D
Sbjct: 225 AIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLD 284
Query: 303 VYCKCE-----------------------------NMNYAESMLLLKGV------RNSFS 327
Y K + N + ES L + + R F
Sbjct: 285 YYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFP 344
Query: 328 ISSMI---------------------VGYSLQGNME--------------EARRHFDSLT 352
++++ VG + + +E EA++ FD++
Sbjct: 345 FATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIA 404
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
K+ V WTA+ S YV+ E ++ S+ + + GV D +L ACA A++ G+
Sbjct: 405 CKSTVPWTAMISAYVQKGKHEEGINVFSD-MRRTGVPADQATFASILRACANLASISLGR 463
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
++H+ ++R G + S L+D Y+KCG MT A F ER+ V +N +I+ YA +G
Sbjct: 464 QLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNG 523
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
+ + + F++M++ G KPD+V+F+++LSA HCG VE +FNSMT Y+++P+ +HY
Sbjct: 524 NVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHY 583
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
M+D+ R + ++A + M +P E ++ S LN CR+++N ELA +A ++L +E
Sbjct: 584 TSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMED 643
Query: 593 -NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSH 651
+ A Y+ ++N+YA G W + +++K MR + SWV ++H+ H+F+ D SH
Sbjct: 644 LRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSH 703
Query: 652 PKTNAIYSVLAIFTGEL 668
P+ I + + E+
Sbjct: 704 PEMKKILRKINALSKEM 720
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 200/662 (30%), Positives = 317/662 (47%), Gaps = 102/662 (15%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R+ L + H I+ G T +N +++YSK L + KLFD+M +RN
Sbjct: 87 RTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRN------ 140
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+V++ S++ G+ + ++ +AL F +M+ E
Sbjct: 141 -------------------------MVSWTSIITGFAHNSRFQ-EALSSFCQMRIEGE-- 172
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+F ++S L C L + FG Q+H +VK F S+L DMYSKC +AC+
Sbjct: 173 IATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACK 232
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
FE EM K DAV W ++I G+V+NGD +
Sbjct: 233 AFE------------------------EMPCK---------DAVLWTSMIDGFVKNGDFK 259
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
+ L +++M + V ++H S LSAC L+ K +H+ +LK G F+ + +
Sbjct: 260 KALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALT 319
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D+Y K +M A N F I H D ++ +V TA
Sbjct: 320 DMYSKSGDMVSAS---------NVFQI------------------HSDCIS---IVSLTA 349
Query: 362 LFSGYVKAQNCEALFDLLSEFVT--KEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
+ GYV+ E LS FV + G+ + L+ ACA QA L G ++H ++
Sbjct: 350 IIDGYVEMDQIEKA---LSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVV 406
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
+ + D + STLVDMY KCG ++ +F D + +N ++ ++ HG AI
Sbjct: 407 KFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIE 466
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
F M+ +G+KP+AVTFV +L H G VE G YF+SM Y + P+ +HY+C+IDL
Sbjct: 467 TFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLL 526
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYV 599
GRA +L++A +F+ ++P E + SFL C+++ + E A A +KL++LE N +V
Sbjct: 527 GRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHGDMERAKFAADKLMKLEPENSGAHV 586
Query: 600 QLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYS 659
L+N+YA E W ++ +RK ++ N+ G SWV + ++ H+F V D SHP+ IY
Sbjct: 587 LLSNIYAKEKQWEDVQSLRKMIKDGNMNKLPGYSWVDIRNKTHVFGVEDWSHPQKKEIYE 646
Query: 660 VL 661
L
Sbjct: 647 KL 648
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 118/483 (24%), Positives = 203/483 (42%), Gaps = 75/483 (15%)
Query: 101 EGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASG 160
EG E F++ H D TV + + + G+QLHA +++ +
Sbjct: 51 EGVEEIISFSFLKNLFGSGHKLSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNT 110
Query: 161 FAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPE 220
F + +++YSKC GE++ +K F + +
Sbjct: 111 FLSNHFLNLYSKC--------------------------------GELDYTIKLFDKMSQ 138
Query: 221 LNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKE 280
N VSW ++I+G+ N +E L F +M G + +S L AC L ++ +
Sbjct: 139 RN-MVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQ 197
Query: 281 IHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGN 340
+H V+K G FV S + D+Y KC G
Sbjct: 198 VHCLVVKCGFGCELFVGSNLTDMYSKC-------------------------------GE 226
Query: 341 MEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLG 400
+ +A + F+ + K+ V+WT++ G+VK + + + VT + V D +L L
Sbjct: 227 LSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDD-VFIDQHVLCSTLS 285
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD--- 457
AC+ A GK +HA IL++G + + + + L DMYSK G+M A +FQ I D
Sbjct: 286 ACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQ--IHSDCIS 343
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFN 517
+V +I Y EKA+ F ++ +GI+P+ TF +++ A + +E G +
Sbjct: 344 IVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHG 403
Query: 518 SMTA-DYKISPETDHYACMIDLYGRANQLEKAIEFMKSI--PTEEDAVILGSFLNVCRLN 574
+ ++K P + ++D+YG+ + +I+ I P E L + L
Sbjct: 404 QVVKFNFKRDPFVS--STLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLG 461
Query: 575 RNA 577
RNA
Sbjct: 462 RNA 464
>gi|359481906|ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Vitis vinifera]
Length = 635
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 180/525 (34%), Positives = 284/525 (54%), Gaps = 30/525 (5%)
Query: 164 SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELND 223
+++I Y KC EEA R+F+ + N+++ AMV R ++ A K F P N
Sbjct: 87 TTVISGYIKCGMIEEARRLFDRVDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKN- 145
Query: 224 AVSWNTLISGYVQNGDAEEGLKLFVRMGE-NGVRWNEHTFASALSACCGLRNVK------ 276
VSWNT+I GY QNG + + LF +M E N V WN T S L+ C + +
Sbjct: 146 VVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWN--TVMSMLAQCGRIEEARRLFDRM 203
Query: 277 CAKEIHSWVL------KNGLIS------------NPFVSSGIVDVYCKCENMNYAESMLL 318
+++ SW KNG I N + ++ Y + ++ A +
Sbjct: 204 PERDVISWTAMIAGLSKNGRIDEARLLFDRMPERNVVSWNAMITGYAQNLRLDEALDLFE 263
Query: 319 LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDL 378
R+ S ++MI G G++ AR+ F+ + +KNV+ WT + +G V+ E +
Sbjct: 264 RMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKI 323
Query: 379 LSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYS 438
S ++ G + V +LGAC+ A L G+++H I + Q ++S L++MYS
Sbjct: 324 FSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYS 383
Query: 439 KCGNMTYAEIIFQNFI--ERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTF 496
KCG + A +F + + +RDLV +N +IA YAHHG+ ++AI F+EM + G KPD VT+
Sbjct: 384 KCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTY 443
Query: 497 VAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIP 556
V +LSA H G VE G KYF+ + D I DHYAC++DL GRA +L++A F++ +
Sbjct: 444 VGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIERLE 503
Query: 557 TEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGR 616
T+ A + G+ L C ++ N ++ +A +KLL +E N Y+ L+N+YA+ G W E R
Sbjct: 504 TKPSARVWGALLAGCNVHANVKIGKQAAKKLLEVEPENAGTYLLLSNIYASTGKWREAAR 563
Query: 617 IRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+R +M+ + GCSW+ V + +H+F VGD SH ++ IYS+L
Sbjct: 564 VRLKMKDKGLKKQPGCSWIEVGNRVHVFVVGDKSHSQSKLIYSLL 608
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 130/531 (24%), Positives = 229/531 (43%), Gaps = 47/531 (8%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
+T ++ Y + N + ++ KLF+EMP +NV SWNT+I ++ + A LF+ P +
Sbjct: 116 VTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPER 175
Query: 86 DLVTYNSML-----CGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLN 140
++V++N+++ CG I +A +LF M D I + N +
Sbjct: 176 NVVSWNTVMSMLAQCGRIE------EARRLFDRMPERDV-ISWTAMIAGLSKNGRIDEAR 228
Query: 141 VGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVA 200
+ F R +V + +G+A + +D EA +FE E +L S N M+
Sbjct: 229 LLFDRMPERNVVSWNAMITGYAQNLRLD---------EALDLFERMPER-DLPSWNTMIT 278
Query: 201 ACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM-GENGVRWNE 259
+ G++ A K F P+ N +SW T+I+G VQ G++EE LK+F RM NG + N+
Sbjct: 279 GLIQNGDLRRARKLFNEMPKKN-VISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQ 337
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLL- 318
TF S L AC L + +++H + K + FV S ++++Y KC + A M
Sbjct: 338 GTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDD 397
Query: 319 -LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT----EKNVVVWTALFSGYVKAQNCE 373
+ R+ S + +I Y+ G +EA F + + + V + L S A E
Sbjct: 398 GMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVE 457
Query: 374 ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL 433
E V ++ L+ C L KE +I R+ + ++ L
Sbjct: 458 EGLKYFDELVKDRSILVREDHYACLVDLCGRAGRL---KEAFGFIERLETKPSARVWGAL 514
Query: 434 VDMYSKCGNMTYAEIIFQNFIE---RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+ + N+ + + +E + Y ++ YA G +A + +M +KG+K
Sbjct: 515 LAGCNVHANVKIGKQAAKKLLEVEPENAGTYLLLSNIYASTGKWREAARVRLKMKDKGLK 574
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGR 541
C +E+G + + D S Y+ + DL+ +
Sbjct: 575 KQP-----------GCSWIEVGNRVHVFVVGDKSHSQSKLIYSLLRDLHSK 614
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 194/659 (29%), Positives = 325/659 (49%), Gaps = 103/659 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H Q++K G + N L+++Y+K L+ +++ +F+ M R
Sbjct: 224 HAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETR------------------ 265
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
D+V++N+++ G + E +AL+LF E ++ +M + T + +
Sbjct: 266 -------------DMVSWNTLMAG-LQLNECELEALQLFHESRATMG--KMTQSTYATVI 309
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
LC L + RQLH+ ++K +G +++L D YSKC
Sbjct: 310 KLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKC------------------- 350
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
GE+ AL F + VSW +ISG +QNGD + LF RM E
Sbjct: 351 -------------GELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMRE 397
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+ V NE T+++ L A + +IH+ V+K P V +
Sbjct: 398 DRVMPNEFTYSAMLKASLSI----LPPQIHAQVIKTNYQHIPSVGT-------------- 439
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
+++ YS G+ E+A F + +K+VV W+A+ S + +A +C
Sbjct: 440 -----------------ALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDC 482
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAA-LHPGKEIHAYILRMGVQMDKKLIS 431
E L ++ +G+ + + ++ ACA +A + G++ HA ++ + S
Sbjct: 483 EGATYLFNKMAI-QGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSS 541
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
LV MYS+ GN+ A+I+F+ +RDLV +N MI+ YA HG+ KAI F +M GI+
Sbjct: 542 ALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQM 601
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
D VTF+A++ H G V G++YF+SM D+KI+P +HYACM+DLY RA +L++ +
Sbjct: 602 DGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSL 661
Query: 552 MKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNW 611
++ +P A++ + L CR+++N EL + +KLL LE ++ + YV L+N+YAA G W
Sbjct: 662 IRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKW 721
Query: 612 AEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYE 670
E +RK M K + AGCSW+ +++++H F D SHP ++ IY L + L +
Sbjct: 722 KERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQ 780
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 121/503 (24%), Positives = 204/503 (40%), Gaps = 79/503 (15%)
Query: 71 DLKQARSLFDSSPHKDL-VTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVT 129
D AR D P +D V N +L Y G + L F + + +D T++
Sbjct: 47 DPPGARYPLDEIPRRDAAVGANRVLFDYAR-RGMVPEVLDQFSVARRGG--VLVDSATLS 103
Query: 130 STLNLCVKLLNVGFGRQLHAFMVKTSNDASGF-AVSSLIDMYSKCRCYEEACRVFEGCTE 188
L C + + G QLH VK +D A +SL+DMY KC E VFEG
Sbjct: 104 CVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEG--- 160
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
P+ N V+W +L++G E + LF
Sbjct: 161 -----------------------------MPKKN-VVTWTSLLTGCAHAQMHSEVMALFF 190
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
RM G+ N TFAS LSA + + +H+ +K G S+ FV + ++++Y KC
Sbjct: 191 RMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKC- 249
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
G +E+A+ F+ + +++V W L +G ++
Sbjct: 250 ------------------------------GLVEDAKSVFNWMETRDMVSWNTLMAG-LQ 278
Query: 369 AQNCE-ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDK 427
CE L E G +T + + + CA L +++H+ +L+ G +
Sbjct: 279 LNECELEALQLFHESRATMGKMTQSTYATV-IKLCANLKQLALARQLHSCVLKHGFHLTG 337
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQNFI-ERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
+++ L D YSKCG + A IF R++V + +I+ +G A++LF M E
Sbjct: 338 NVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMRE 397
Query: 487 KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLE 546
+ P+ T+ A+L A S+ + + + +Y+ P ++ Y + E
Sbjct: 398 DRVMPNEFTYSAMLKASL---SILPPQIHAQVIKTNYQHIPSVG--TALLASYSKFGSTE 452
Query: 547 KAIEFMKSIPTEEDAVILGSFLN 569
A+ K I ++D V + L+
Sbjct: 453 DALSIFKMI-EQKDVVAWSAMLS 474
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 149/364 (40%), Gaps = 36/364 (9%)
Query: 219 PELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCA 278
P + AV N ++ Y + G E L F GV + T + L AC + +
Sbjct: 59 PRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLG 118
Query: 279 KEIHSWVLKNGLISNPFVSSG--IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYS 336
+++H +K G VS+G +VD+Y KC
Sbjct: 119 EQLHCLCVKCGHDRGE-VSAGTSLVDMYMKC----------------------------- 148
Query: 337 LQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILV 396
G++ E F+ + +KNVV WT+L +G AQ + L + EG+ +
Sbjct: 149 --GSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFR-MRAEGIWPNPFTFA 205
Query: 397 ILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER 456
+L A A Q AL G+ +HA ++ G + + ++L++MY+KCG + A+ +F R
Sbjct: 206 SVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETR 265
Query: 457 DLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYF 516
D+V +N ++A + E +A+ LF E K T+ ++ + + + +
Sbjct: 266 DMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQ-L 324
Query: 517 NSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRN 576
+S + + + D Y + +L A+ + V + ++ C N +
Sbjct: 325 HSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGD 384
Query: 577 AELA 580
LA
Sbjct: 385 IPLA 388
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 191/610 (31%), Positives = 310/610 (50%), Gaps = 72/610 (11%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
E F N +I +KS + A ++FDS +D VT+N M+ GY A G+ + ++F
Sbjct: 237 EFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYA-AIGFYLEGFQMFH 295
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
M+ A +++ + L LC + + F +QLH +VK + + ++L+ YSK
Sbjct: 296 RMRLAG--VKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSK 353
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C +EA ++F +M A ++ V+W +I
Sbjct: 354 CSSVDEAFKLF-------------SMADAA-------------------HNVVTWTAMIG 381
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
G+VQN + ++ + LF +M GVR N T+++ L+ + ++H+ ++K
Sbjct: 382 GFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAG----KPSSLLSQLHAQIIKAYYEK 437
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
P V++ ++D Y K GN+ E+ R F S+
Sbjct: 438 VPSVATALLDAYVKT-------------------------------GNVVESARVFYSIP 466
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAA-LHPG 411
K++V W+A+ +G + ++ E ++ + V KEGV + ++ AC+ AA + G
Sbjct: 467 AKDIVAWSAMLTGLAQTRDSEKAMEVFIQLV-KEGVKPNEYTFSSVINACSSSAATVEHG 525
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
K+IHA ++ G + S L+ MYSK GN+ AE +F ERD+V +N MI Y H
Sbjct: 526 KQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQH 585
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH 531
G +KA+ +F+ M +G+ D VTF+ +L+A H G VE GEKYFN M DY I + +H
Sbjct: 586 GDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEH 645
Query: 532 YACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLE 591
Y+CM+DLY RA +KA++ + +P I + L CR++RN EL A EKL+ L+
Sbjct: 646 YSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQ 705
Query: 592 GNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSH 651
N+ YV L+N++A GNW E +RK M K + AGCSW+ +++ I F GDVSH
Sbjct: 706 PNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSH 765
Query: 652 PKTNAIYSVL 661
P ++ +Y+ L
Sbjct: 766 PFSDLVYAKL 775
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 136/593 (22%), Positives = 253/593 (42%), Gaps = 95/593 (16%)
Query: 27 TTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKD 86
+ + + H H L F +P R + A LFD +P KD
Sbjct: 26 SIHHIKHFLHPHGFLYHQSLPFISLPSRP-----------------RYAHQLFDETPLKD 68
Query: 87 LVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQ 146
+ YN +L + + ++ +AL LF ++ S+ + +D T++ L +C L + GRQ
Sbjct: 69 ISHYNRLLFDF-SRNNHDREALHLFKDLHSSG--LGVDGLTLSCALKVCGVLFDQVVGRQ 125
Query: 147 LHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREG 206
+H +K+ +SL+DMY K +E+ +F+
Sbjct: 126 VHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFD---------------------- 163
Query: 207 EMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASAL 266
EM +K + VSW +L+SGY +NG +E + L +M GV N TFA+ L
Sbjct: 164 --EMGIK---------NVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVL 212
Query: 267 SACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSF 326
A ++ ++H+ ++KNG FV + ++ +Y K E + AE++ VR+S
Sbjct: 213 GALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSV 272
Query: 327 SISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKE 386
+ + MI GY+ G E + F + V + +F C A
Sbjct: 273 TWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVF--------CTA------------ 312
Query: 387 GVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYA 446
L C+ Q L+ K++H +++ G + + + + L+ YSKC ++ A
Sbjct: 313 ------------LKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEA 360
Query: 447 EIIFQNF-IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRH 505
+F ++V + MI + + + +KA+ LF +M +G++P+ T+ +L+
Sbjct: 361 FKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAG--- 417
Query: 506 CGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILG 565
S + + + + A Y+ P ++D Y + + ++ SIP +D V
Sbjct: 418 KPSSLLSQLHAQIIKAYYEKVPSV--ATALLDAYVKTGNVVESARVFYSIPA-KDIVAWS 474
Query: 566 SFLNVCRLNRNAELAGEAEEKLLRLEG--NNKARYVQLANVYAAEGNWAEMGR 616
+ L R++E A E +L++ EG N+ + + N ++ E G+
Sbjct: 475 AMLTGLAQTRDSEKAMEVFIQLVK-EGVKPNEYTFSSVINACSSSAATVEHGK 526
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 125/308 (40%), Gaps = 57/308 (18%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A+K+G + ++ L+ +YSK + + K+F ER++ SWN
Sbjct: 529 HATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWN------------ 576
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
SM+ GY G AL++F MQ ++ + +D+ T L
Sbjct: 577 -------------------SMITGY-GQHGDAKKALEVFQIMQ--NQGLPLDDVTFIGVL 614
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSN-DASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
C V G + M+K + D S ++D+YS+ +++A + G +
Sbjct: 615 TACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMPFPAS 674
Query: 192 LISKNAMVAACCREGEMEM----ALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
++AAC +E+ A K QP NDAV + L + + G+ EE +
Sbjct: 675 PTIWRTLLAACRVHRNLELGKLAAEKLVSLQP--NDAVGYVLLSNIHAVAGNWEEKAHVR 732
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF---VSSGIVDVY 304
M E V+ A C +K I S++ G +S+PF V + + ++
Sbjct: 733 KLMDERKVK---------KEAGCSWIEIK--NRIFSFLA--GDVSHPFSDLVYAKLEELS 779
Query: 305 CKCENMNY 312
K ++M Y
Sbjct: 780 IKLKDMGY 787
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 206/655 (31%), Positives = 324/655 (49%), Gaps = 77/655 (11%)
Query: 13 HVQAIKAGLTLTTITTNQLIH--IYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSH 70
H Q IK GL T ++L+ + S H FD P
Sbjct: 8 HAQMIKTGLHNTNYALSKLLEFCVVSPH---------FDGFP------------------ 40
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
A S+FD+ +L+ +N+M G+ + ALKL++ M S + D +T
Sbjct: 41 ---YAISVFDTIQEPNLLIWNTMFRGHALSSD-PVSALKLYLVMISLG--LLPDSYTFPF 94
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L C K G+Q+H ++K D + +SLI MY++ E+A +VF+ +
Sbjct: 95 LLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFD-ISSHR 153
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
+++S A++A G +E A K F P D VSWN +ISGYV+ G+ +E L+LF M
Sbjct: 154 DVVSYTALIAGYVSRGYIESAQKLFDEIPG-KDVVSWNAMISGYVETGNYKEALELFKEM 212
Query: 251 GE-NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
VR +E T + +SAC +++ + +HSW+ +G SN + + ++D+Y K
Sbjct: 213 MMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKF-- 270
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
G +E A FD L K+V+ W L GY
Sbjct: 271 -----------------------------GEVETACELFDGLWNKDVISWNTLIGGYTHM 301
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI---LRMGVQMD 426
+ L E + + G + + ++ +L ACA A+ G+ IH YI L+ V
Sbjct: 302 NLYKEALLLFQEML-RSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNV 360
Query: 427 KKLISTLVDMYSKCGNMTYAEIIFQNFIE-RDLVLYNVMIACYAHHGHEEKAILLFEEML 485
L ++L+DMY+KCG++ A+ +F + + R L +N MI+ +A HG A +F M
Sbjct: 361 SSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMR 420
Query: 486 EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQL 545
GI+PD +TFV +LSA H G +++G F SMT Y+I+P+ +HY CMIDL G +
Sbjct: 421 MNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLF 480
Query: 546 EKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVY 605
++A E + ++P E D VI S L C+++ N EL +KL+++E N YV L+N+Y
Sbjct: 481 KEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIY 540
Query: 606 AAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
AA G W E+ +IR + +GMK + GCS + ++ +H F +GD HP+ IY
Sbjct: 541 AAAGRWNEVAKIRALLNDKGMK-KKVPGCSSIEIDSVVHEFIIGDKLHPQNREIY 594
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 148/555 (26%), Positives = 249/555 (44%), Gaps = 123/555 (22%)
Query: 7 KEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISAC 66
KE H +K G L LI +Y+++ L ++RK+FD R+V S+ +I+
Sbjct: 106 KEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGY 165
Query: 67 IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEF 126
+ ++ A+ LFD P KD+V++N+M+ GY+ Y+ +AL+LF EM ++R DE
Sbjct: 166 VSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYK-EALELFKEMMMM-TNVRPDES 223
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFA-----VSSLIDMYSKCRCYEEACR 181
T+ + ++ C + ++ GR +H+++ ND GFA V++LID+YSK E AC
Sbjct: 224 TMVTVVSACAQSDSIELGRHVHSWI----ND-HGFASNLKIVNALIDLYSKFGEVETACE 278
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F+G W + D +SWNTLI GY +
Sbjct: 279 LFDG-----------------------------LWNK----DVISWNTLIGGYTHMNLYK 305
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLK--NGLISN-PFVSS 298
E L LF M +G N+ T S L AC L + + IH ++ K G+++N + +
Sbjct: 306 EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQT 365
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFD-SLTEKNVV 357
++D+Y KC G+++ A++ FD S++ +++
Sbjct: 366 SLIDMYAKC-------------------------------GDIDAAQQVFDSSMSNRSLS 394
Query: 358 VWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
W A+ SG+ A FD+ S + G+ D + V LL AC+ L G+ I
Sbjct: 395 TWNAMISGFAMHGRANAAFDIFSR-MRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRS 453
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
+ R G ++ KL Y MI H G ++A
Sbjct: 454 MTR-GYEITPKLEH-----------------------------YGCMIDLLGHSGLFKEA 483
Query: 478 ILLFEEMLEK-GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISP-ETDHYACM 535
EEM+ ++PD V + ++L A + G++E+GE + + KI P + Y +
Sbjct: 484 ----EEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLI---KIEPGNSGSYVLL 536
Query: 536 IDLY---GRANQLEK 547
++Y GR N++ K
Sbjct: 537 SNIYAAAGRWNEVAK 551
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 202/415 (48%), Gaps = 38/415 (9%)
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV---FEGCTEEVNLISKNAMVAA 201
R +HA M+KT + +A+S L+ E C V F+G +++
Sbjct: 5 RXIHAQMIKTGLHNTNYALSKLL----------EFCVVSPHFDGFPYAISVFDT------ 48
Query: 202 CCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHT 261
++P L + WNT+ G+ + D LKL++ M G+ + +T
Sbjct: 49 --------------IQEPNL---LIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYT 91
Query: 262 FASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKG 321
F L +C + K ++IH VLK G + +V + ++ +Y + + A + +
Sbjct: 92 FPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISS 151
Query: 322 VRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSE 381
R+ S +++I GY +G +E A++ FD + K+VV W A+ SGYV+ N + +L E
Sbjct: 152 HRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKE 211
Query: 382 FVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
+ V D +V ++ ACA ++ G+ +H++I G + K+++ L+D+YSK G
Sbjct: 212 MMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFG 271
Query: 442 NMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
+ A +F +D++ +N +I Y H ++A+LLF+EML G P+ VT ++IL
Sbjct: 272 EVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILP 331
Query: 502 AFRHCGSVEMGEKYFNSMTADYK--ISPETDHYACMIDLYGRANQLEKAIEFMKS 554
A H G++++G + K ++ + +ID+Y + ++ A + S
Sbjct: 332 ACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDS 386
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 96/230 (41%), Gaps = 28/230 (12%)
Query: 412 KEIHAYILRMGVQMDKKLISTLVD---MYSKCGNMTYAEIIFQNFIERDLVLYNVMIACY 468
+ IHA +++ G+ +S L++ + YA +F E +L+++N M +
Sbjct: 5 RXIHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRGH 64
Query: 469 AHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE 528
A A+ L+ M+ G+ PD+ TF +L + + G++ + K+ +
Sbjct: 65 ALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHV---LKLGFD 121
Query: 529 TDHY--ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAG----- 581
D Y +I +Y + +LE A + I + D V + A +AG
Sbjct: 122 LDIYVHTSLISMYAQNGRLEDARKVF-DISSHRDVV-----------SYTALIAGYVSRG 169
Query: 582 --EAEEKLL-RLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNR 628
E+ +KL + G + + + + Y GN+ E + K+M M R
Sbjct: 170 YIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVR 219
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 185/593 (31%), Positives = 306/593 (51%), Gaps = 71/593 (11%)
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFT 127
K + ++A+ LF +DLV +++++ + GY +AL LF EMQ ++ ++ + T
Sbjct: 376 KCGETEKAKQLFWGLQGRDLVAWSAIIAALVQT-GYPEEALSLFQEMQ--NQKMKPNRVT 432
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
+ S L C L + G+ +H F VK D+ ++L+ MY+KC
Sbjct: 433 LMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKC-------------- 478
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
G AL TF R D V+WN+LI+GY Q GD + +F
Sbjct: 479 ------------------GFFTAALTTFNRMSS-RDIVTWNSLINGYAQIGDPYNAIDMF 519
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
++ + + + T + AC L ++ IH ++K G S+ V + ++D+Y KC
Sbjct: 520 YKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKC 579
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
++ AE + + F+ K+ V W + + Y+
Sbjct: 580 GSLPSAEFLF----NKTDFT--------------------------KDEVTWNVIIAAYM 609
Query: 368 KAQNCEALFDLLSEF--VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
QN A + +S F + E +++ V +L A A AA G HA I++MG
Sbjct: 610 --QNGHAK-EAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLS 666
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
+ + ++L+DMY+KCG + Y+E +F +D V +N M++ YA HGH ++AI LF M
Sbjct: 667 NTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQ 726
Query: 486 EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQL 545
E ++ D+V+FV++LSA RH G VE G K F+SM+ Y I P+ +HYACM+DL GRA
Sbjct: 727 ESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLF 786
Query: 546 EKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVY 605
++ + F+K +P E DA + G+ L CR++ N +L A + L++LE N A +V L+++Y
Sbjct: 787 DETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIY 846
Query: 606 AAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
A G WA+ G+ R +M + + GCSWV +++++H F VGD SHP+ +++
Sbjct: 847 AQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMH 899
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 140/552 (25%), Positives = 242/552 (43%), Gaps = 112/552 (20%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N +I K D+ AR +FD +D V++ +M+ GY + G + L+LF +M+ +
Sbjct: 267 NGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAH-NGCFVEVLELFDKMKLGN- 324
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
+R+++ + S + +++ G+++H ++ D+ + L+ MY+KC
Sbjct: 325 -VRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKC------ 377
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
GE E A + FW + D V+W+ +I+ VQ G
Sbjct: 378 --------------------------GETEKAKQLFWGL-QGRDLVAWSAIIAALVQTGY 410
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
EE L LF M ++ N T S L AC L +K K IH + +K + S+ +
Sbjct: 411 PEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTA 470
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
+V +Y KC G A F+ ++ +++V W
Sbjct: 471 LVSMYAKC-------------------------------GFFTAALTTFNRMSSRDIVTW 499
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
+L +GY + + D+ + + + DA +V ++ ACAL L G IH I+
Sbjct: 500 NSLINGYAQIGDPYNAIDMFYK-LRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIV 558
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIF-QNFIERDLVLYNVMIACYAHHGHEEKAI 478
++G + D + + L+DMY+KCG++ AE +F + +D V +NV+IA Y +GH ++AI
Sbjct: 559 KLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAI 618
Query: 479 LLFEEMLEKGIKPDAVTFVAI------LSAFRH--------------------------- 505
F +M + P++VTFV++ L+AFR
Sbjct: 619 SSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMY 678
Query: 506 --CGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI---EFMKSIPTEED 560
CG ++ EK FN M D+K +T + M+ Y ++AI M+ + D
Sbjct: 679 AKCGQLDYSEKLFNEM--DHK---DTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQID 733
Query: 561 AVILGSFLNVCR 572
+V S L+ CR
Sbjct: 734 SVSFVSVLSACR 745
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 142/552 (25%), Positives = 234/552 (42%), Gaps = 107/552 (19%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTI 62
+LNL+E + H + + GL L+ +YSK L+ +R++FD+MP+R+V +WN +
Sbjct: 142 ALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAM 201
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
I+ +S D +A F S + E L LF
Sbjct: 202 IAGLSQSEDPCEAVDFFRSMQ-------------LVGVEPSSVSLLNLFP---------- 238
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
+C KL N+ R +H ++ + D S + LID+YSKC + A RV
Sbjct: 239 ----------GIC-KLSNIELCRSIHGYVFR--RDFSSAVSNGLIDLYSKCGDVDVARRV 285
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
F+ ++ D VSW T+++GY NG E
Sbjct: 286 FDQMVDQ---------------------------------DDVSWGTMMAGYAHNGCFVE 312
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
L+LF +M VR N+ + SA A +++ KEIH L+ + S+ V++ ++
Sbjct: 313 VLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMV 372
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
+Y KC G E+A++ F L +++V W+A+
Sbjct: 373 MYAKC-------------------------------GETEKAKQLFWGLQGRDLVAWSAI 401
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
+ V+ E L E + + + + + L+ +L ACA + L GK IH + ++
Sbjct: 402 IAALVQTGYPEEALSLFQE-MQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKAD 460
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
+ D + LV MY+KCG T A F RD+V +N +I YA G AI +F
Sbjct: 461 MDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFY 520
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA--CMIDLYG 540
++ I PDA T V ++ A ++ G + K+ E+D + +ID+Y
Sbjct: 521 KLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIV---KLGFESDCHVKNALIDMYA 577
Query: 541 RANQLEKAIEFM 552
+ L A EF+
Sbjct: 578 KCGSLPSA-EFL 588
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 125/501 (24%), Positives = 219/501 (43%), Gaps = 74/501 (14%)
Query: 70 HDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVT 129
H ARS+FDS+P+ + +NSM+ Y ++ Y +AL+++ M ++ + D++T T
Sbjct: 77 HKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYN-EALEMYYCM--VEKGLEPDKYTFT 133
Query: 130 STLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEE 189
L C LN+ G H + + + F + L+DMYSK
Sbjct: 134 FVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKM---------------- 177
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
G+++ A + F + P+ D V+WN +I+G Q+ D E + F
Sbjct: 178 ----------------GDLKRAREVFDKMPK-RDVVAWNAMIAGLSQSEDPCEAVDFFRS 220
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
M GV + + + C L N++ + IH +V + S VS+G++D+Y KC
Sbjct: 221 MQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSA--VSNGLIDLYSKC-- 276
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
G+++ ARR FD + +++ V W + +GY
Sbjct: 277 -----------------------------GDVDVARRVFDQMVDQDDVSWGTMMAGYAHN 307
Query: 370 QNCEALFDLLSEFVTKEG-VVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK 428
+ +L + K G V + + V A A L GKEIH L+ + D
Sbjct: 308 GCFVEVLELFDKM--KLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDIL 365
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
+ + L+ MY+KCG A+ +F RDLV ++ +IA G+ E+A+ LF+EM +
Sbjct: 366 VATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQK 425
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
+KP+ VT ++IL A +++G K + T + + ++ +Y + A
Sbjct: 426 MKPNRVTLMSILPACADLSLLKLG-KSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAA 484
Query: 549 IEFMKSIPTEEDAVILGSFLN 569
+ + + D V S +N
Sbjct: 485 LTTFNRM-SSRDIVTWNSLIN 504
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 100/208 (48%), Gaps = 4/208 (1%)
Query: 307 CENMN---YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
C+++N + +++ G ++ SI+ +I YSL + AR FDS + ++W ++
Sbjct: 42 CKHLNPLLQIHAQIIVSGFKHHHSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMI 101
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
Y +++ ++ V K G+ D +L AC L G H I R G+
Sbjct: 102 RAYTRSKQYNEALEMYYCMVEK-GLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGL 160
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
+ D + + LVDMYSK G++ A +F +RD+V +N MIA + +A+ F
Sbjct: 161 ERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRS 220
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEM 511
M G++P +V+ + + ++E+
Sbjct: 221 MQLVGVEPSSVSLLNLFPGICKLSNIEL 248
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 10/183 (5%)
Query: 380 SEFVT-KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYS 438
SEF + T+ L LL +C L+P +IHA I+ G + I+ L+++YS
Sbjct: 19 SEFPSLSSSTYTNYLHYPRLLSSCK---HLNPLLQIHAQIIVSGFKHHHS-ITHLINLYS 74
Query: 439 KCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVA 498
A +F + +L+N MI Y +A+ ++ M+EKG++PD TF
Sbjct: 75 LFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTF 134
Query: 499 ILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY--ACMIDLYGRANQLEKAIEFMKSIP 556
+L A G++ + E + D + E D + A ++D+Y + L++A E +P
Sbjct: 135 VLKAC--TGALNLQEGVWFHGEIDRR-GLERDVFIGAGLVDMYSKMGDLKRAREVFDKMP 191
Query: 557 TEE 559
+
Sbjct: 192 KRD 194
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 6/123 (4%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
+E + H I+ G T+ N LI +Y+K L S KLF+EM ++ SWN ++S
Sbjct: 649 FREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSG 708
Query: 66 CIKSHDLKQARSLF----DSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+A +LF +S D V++ S+L +A G + K+F M S HI
Sbjct: 709 YAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHA-GLVEEGRKIFHSM-SDKYHI 766
Query: 122 RMD 124
+ D
Sbjct: 767 KPD 769
>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 710
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 197/653 (30%), Positives = 310/653 (47%), Gaps = 99/653 (15%)
Query: 9 ALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIK 68
L H AIK + LI++Y K + ++RK+FD +PERN SW TIIS
Sbjct: 132 GLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIIS---- 187
Query: 69 SHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
GY E +A +LF M+ E D+F
Sbjct: 188 ---------------------------GYA-MERMAFEAWELFXLMRR--EEGAHDKFIY 217
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE 188
TS L+ V +G+Q+H +K + ++L+ MY KC C ++A + FE +
Sbjct: 218 TSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDALKTFELSGD 277
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
+ D ++W+ +I+GY Q GD+ E L LF
Sbjct: 278 K---------------------------------DDITWSAMITGYAQAGDSHEALNLFY 304
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
M NG + +E TF ++AC + ++ K+IH + LK G + + +VD+Y KC
Sbjct: 305 NMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKC- 363
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
G++ +AR+ FD L E ++V+WT++ SGY +
Sbjct: 364 ------------------------------GSLVDARKGFDYLKEPDIVLWTSMISGYAQ 393
Query: 369 AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK 428
E L + E ++ L + +L AC+ AAL GK+IHA ++ G ++
Sbjct: 394 NGENETALTLYCR-MQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVP 452
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
+ S L MY+KCG++ ++F+ RD++ +N MI+ + +G KA+ LFEE+
Sbjct: 453 IGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGT 512
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
KPD VTFV +LSA H G VE G+ YF M ++ I P +HYACM+D+ RA +L +
Sbjct: 513 TKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIVPRVEHYACMVDILSRAGKLHET 572
Query: 549 IEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAE 608
EF++S + + L CR RN EL A EKL+ L + Y+ L+++Y A
Sbjct: 573 KEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYILLSSIYTAL 632
Query: 609 GNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
G ++ R+R+ M+ N+ GCSW+ ++ ++H+F VGD HP+ I S L
Sbjct: 633 GRSDDVERVRRLMKLRGVNKEPGCSWIELKSQVHVFVVGDQIHPQIVKICSEL 685
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 159/606 (26%), Positives = 251/606 (41%), Gaps = 101/606 (16%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R +L++ H Q ++ G + TN L+++Y+K + +++ +F+ + ++V SWN
Sbjct: 22 RQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKDVVSWNC 81
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I + K V Y+ + ++LF M++ E+
Sbjct: 82 LI----------------NGYSQKGTVGYSFV--------------MELFQRMRA--ENT 109
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+ T + G Q HA +KTSN F SSLI+MY K C +A +
Sbjct: 110 LPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARK 169
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
VF+ PE N VSW T+ISGY A
Sbjct: 170 VFDTI--------------------------------PERN-TVSWATIISGYAMERMAF 196
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E +LF M ++ + S LSA V K+IH LKNGL+S V + +V
Sbjct: 197 EAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALV 256
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
+Y KC ++ A L G ++ + S+MI GY+ G+ EA F
Sbjct: 257 TMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLF------------- 303
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
N + SEF V ++ AC+ AL GK+IH Y L+
Sbjct: 304 --------YNMHLNGNKPSEFT-----------FVGVINACSDIGALEEGKQIHGYSLKA 344
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
G + ++ LVDMY+KCG++ A F E D+VL+ MI+ YA +G E A+ L+
Sbjct: 345 GYECQIYFMTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLY 404
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGR 541
M + I P +T ++L A ++E G K ++ T Y S E + + +Y +
Sbjct: 405 CRMQMERIMPHELTMASVLRACSSLAALEQG-KQIHAQTIKYGFSLEVPIGSALSTMYAK 463
Query: 542 ANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQL 601
LE + +P+ D + + ++ N A E E+L G K YV
Sbjct: 464 CGSLEDGNLVFRRMPS-RDIMTWNAMISGLSQNGEGLKALELFEEL--RHGTTKPDYVTF 520
Query: 602 ANVYAA 607
NV +A
Sbjct: 521 VNVLSA 526
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/441 (25%), Positives = 190/441 (43%), Gaps = 77/441 (17%)
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
C + ++ G+ +HA +++T + +S + +SL+++Y+KC +A VFE T +
Sbjct: 20 CTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNK----- 74
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG--LKLFVRMGE 252
D VSWN LI+GY Q G ++LF RM
Sbjct: 75 ----------------------------DVVSWNCLINGYSQKGTVGYSFVMELFQRMRA 106
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
N HTF+ +A + H+ +K + FV S ++++YCK
Sbjct: 107 ENTLPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKI----- 161
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G M +AR+ FD++ E+N V W + SGY +
Sbjct: 162 --------------------------GCMLDARKVFDTIPERNTVSWATIISGYAMERMA 195
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
++L +EG D I +L A + +H GK+IH L+ G+ + +
Sbjct: 196 FEAWELFXLMRREEG-AHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNA 254
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
LV MY KCG + A F+ ++D + ++ MI YA G +A+ LF M G KP
Sbjct: 255 LVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPS 314
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFN-SMTADYKISPETDHYACMIDLYGRANQL---EKA 548
TFV +++A G++E G++ S+ A Y+ + ++D+Y + L K
Sbjct: 315 EFTFVGVINACSDIGALEEGKQIHGYSLKAGYEC--QIYFMTALVDMYAKCGSLVDARKG 372
Query: 549 IEFMKSIPTEEDAVILGSFLN 569
+++K E D V+ S ++
Sbjct: 373 FDYLK----EPDIVLWTSMIS 389
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 109/255 (42%), Gaps = 32/255 (12%)
Query: 261 TFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLK 320
+F L C ++++ K IH+ +L+ G S+ ++++ +V++Y KC
Sbjct: 12 SFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKC------------- 58
Query: 321 GVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDL-L 379
G++ +A+ F+S+T K+VV W L +GY + F + L
Sbjct: 59 ------------------GSIVKAKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMEL 100
Query: 380 SEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
+ + E + + + A + G + HA ++ D + S+L++MY K
Sbjct: 101 FQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCK 160
Query: 440 CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
G M A +F ER+ V + +I+ YA +A LF M + D + ++
Sbjct: 161 IGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSV 220
Query: 500 LSAFRHCGSVEMGEK 514
LSA V G++
Sbjct: 221 LSALTVPDLVHYGKQ 235
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 194/611 (31%), Positives = 316/611 (51%), Gaps = 43/611 (7%)
Query: 57 FSWNTIISACIKS---HDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIE 113
++ + ++ C+ S L A S+F++ +L+ +N+ML G ++ L++++
Sbjct: 15 YALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLASSSDL-VSPLEMYVR 73
Query: 114 MQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKC 173
M S H+ + +T L C K GRQ+HA ++K + +A +SLI MY++
Sbjct: 74 MVSXG-HVP-NAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARN 131
Query: 174 RCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISG 233
E+A +VF+ ++ +++S A++ G++ A K F E D VSWN +I+G
Sbjct: 132 GRLEDARKVFDXSSQR-DVVSCTALITGYASRGDVRSARKVFDXITE-RDVVSWNAMITG 189
Query: 234 YVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKN-GLIS 292
YV+N EE L+LF M VR +E T S LSAC +++ +EIH+ V + G S
Sbjct: 190 YVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGS 249
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
+ + + + +Y KC G++E A F+ L+
Sbjct: 250 SLKIVNAFIGLYSKC-------------------------------GDVEIASGLFEGLS 278
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
K+VV W L GY + L E + + G + + ++ +L ACA A+ G+
Sbjct: 279 CKDVVSWNTLIGGYTHMNLYKEALLLFQEML-RSGESPNDVTMLSVLPACAHLGAIDIGR 337
Query: 413 EIHAYILRM--GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
IH YI + GV L ++L+DMY+KCG++ A +F + + + L +N MI +A
Sbjct: 338 WIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAM 397
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD 530
HG A LF M + GI+PD +T V +LSA H G +++G F S+T DY I+P+ +
Sbjct: 398 HGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLE 457
Query: 531 HYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRL 590
HY CMIDL G A ++A E + +P E D VI S L C+++ N ELA +KL+ +
Sbjct: 458 HYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEI 517
Query: 591 EGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVS 650
E N YV L+N+YA G W ++ RIR+ + G + GCS + ++ +H F +GD
Sbjct: 518 EPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGMKKVPGCSSIEIDSVVHEFIIGDKL 577
Query: 651 HPKTNAIYSVL 661
HP++ IY +L
Sbjct: 578 HPQSREIYRML 588
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 155/587 (26%), Positives = 253/587 (43%), Gaps = 138/587 (23%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
+S +E H Q +K G L LI +Y+++ L ++RK+FD +R+V S
Sbjct: 95 KSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTA 154
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I+ D++ AR +FD +D+V++N+M+ GY+ GYE +AL+LF EM + +
Sbjct: 155 LITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYE-EALELFKEMMRTN--V 211
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFA-----VSSLIDMYSKCRCY 176
R DE T+ S L+ C + ++ GR++H + +D GF V++ I +YSKC
Sbjct: 212 RPDEGTLVSVLSACAQSGSIELGREIHTLV----DDHHGFGSSLKIVNAFIGLYSKCGDV 267
Query: 177 EEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQ 236
E A +FEG + C+ D VSWNTLI GY
Sbjct: 268 EIASGLFEGLS---------------CK------------------DVVSWNTLIGGYTH 294
Query: 237 NGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLK--NGLISNP 294
+E L LF M +G N+ T S L AC L + + IH ++ K G+ +
Sbjct: 295 MNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGS 354
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
+ + ++D+Y KC G++E A + F+S+ K
Sbjct: 355 ALRTSLIDMYAKC-------------------------------GDIEAAHQVFNSMMHK 383
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
++ W A+ G+ A FDL S + K G+ D + LV LL AC+
Sbjct: 384 SLSSWNAMIFGFAMHGRANAAFDLFSR-MRKNGIEPDDITLVGLLSACS----------- 431
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGH 473
H+ +L +G + K + Q++ I L Y MI H G
Sbjct: 432 HSGLLDLGRHIFKS--------------------VTQDYNITPKLEHYGCMIDLLGHAG- 470
Query: 474 EEKAILLFEEMLE----KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE- 528
LF+E E ++PD V + ++L A + G++E+ E + + +I PE
Sbjct: 471 ------LFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLM---EIEPEN 521
Query: 529 TDHYACMIDLYGRANQLEKAIEF--------MKSIP----TEEDAVI 563
+ Y + ++Y A + E MK +P E D+V+
Sbjct: 522 SGSYVLLSNIYATAGRWEDVARIREVLNGKGMKKVPGCSSIEIDSVV 568
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 205/415 (49%), Gaps = 43/415 (10%)
Query: 148 HAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV---FEGCTEEVNLISKNAMVAACCR 204
HA MVKT + +A+S L+ E C V F+G V++
Sbjct: 2 HAQMVKTGLHNTNYALSKLL----------ELCVVSPHFDGLPYAVSVFETX-------- 43
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFAS 264
++P L + WNT++ G + D L+++VRM G N +TF
Sbjct: 44 ------------QEPNL---LIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPF 88
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
L +C + + ++IH+ V+K G + + + ++ +Y + + A + R+
Sbjct: 89 LLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRD 148
Query: 325 SFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVT 384
S +++I GY+ +G++ AR+ FD +TE++VV W A+ +GYV+ E +L E +
Sbjct: 149 VVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMM- 207
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYI-LRMGVQMDKKLISTLVDMYSKCGNM 443
+ V D LV +L ACA ++ G+EIH + G K+++ + +YSKCG++
Sbjct: 208 RTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDV 267
Query: 444 TYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAF 503
A +F+ +D+V +N +I Y H ++A+LLF+EML G P+ VT +++L A
Sbjct: 268 EIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPAC 327
Query: 504 RHCGSVEMGEKYFNSMTADYKISPETDHYA---CMIDLYGRANQLEKAIEFMKSI 555
H G++++G + + D ++ T+ A +ID+Y + +E A + S+
Sbjct: 328 AHLGAIDIGR--WIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSM 380
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 190/658 (28%), Positives = 313/658 (47%), Gaps = 103/658 (15%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTI 62
S NL+ I H AI+ G L + L+ +YSK L ++ K+F + + +V SW+ I
Sbjct: 343 SGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAI 402
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
I+ + ++A +F H ++
Sbjct: 403 ITCLDQKGQSREAAEVFKRMRHSGVIP--------------------------------- 429
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
++FT+ S ++ L ++ +G +HA + K + ++L+ MY K ++ CRV
Sbjct: 430 -NQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRV 488
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
FE T D +SWN L+SG+ N +
Sbjct: 489 FEATTNR---------------------------------DLISWNALLSGFHDNETCDT 515
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
GL++F +M G N +TF S L +C L +V K++H+ ++KN L N FV + +VD
Sbjct: 516 GLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVD 575
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
+Y K N F +E+A F+ L ++++ WT +
Sbjct: 576 MYAK-----------------NRF--------------LEDAETIFNRLIKRDLFAWTVI 604
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
+GY + E + + +EGV + L L C+ A L G+++H+ ++ G
Sbjct: 605 VAGYAQDGQGEKAVKCFIQ-MQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAG 663
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
D + S LVDMY+KCG + AE++F + RD V +N +I Y+ HG KA+ FE
Sbjct: 664 QSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFE 723
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRA 542
ML++G PD VTF+ +LSA H G +E G+K+FNS++ Y I+P +HYACM+D+ GRA
Sbjct: 724 AMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRA 783
Query: 543 NQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLA 602
+ + F++ + + +I + L C+++ N E A KL LE + Y+ L+
Sbjct: 784 GKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLS 843
Query: 603 NVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
N++AA+G W ++ +R M RG+K + GCSWV V ++H+F D SHPK I+
Sbjct: 844 NMFAAKGMWDDVTNVRALMSTRGVK--KEPGCSWVEVNGQVHVFLSHDGSHPKIREIH 899
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 142/549 (25%), Positives = 252/549 (45%), Gaps = 110/549 (20%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L E H Q IK+G+ + N L+++Y+K + K+F E+PER+V SW +I+
Sbjct: 143 DLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALIT 202
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
G++ AEGY + A+ LF EM+ E + +
Sbjct: 203 -------------------------------GFV-AEGYGSGAVNLFCEMRR--EGVEAN 228
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
EFT + L C L++ FG+Q+HA +K + + F S+L+D+Y+KC
Sbjct: 229 EFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKC----------- 277
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
GEM +A + F P+ N AVSWN L++G+ Q GDAE+ L
Sbjct: 278 ---------------------GEMVLAERVFLCMPKQN-AVSWNALLNGFAQMGDAEKVL 315
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
LF RM + + +++ T ++ L C N++ + +HS ++ G + F+S +VD+Y
Sbjct: 316 NLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMY 375
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
KC G +A + F + + +VV W+A+ +
Sbjct: 376 SKC-------------------------------GLAGDALKVFVRIEDPDVVSWSAIIT 404
Query: 365 GY-VKAQNCEA--LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
K Q+ EA +F + GV+ + L L+ A L+ G+ IHA + +
Sbjct: 405 CLDQKGQSREAAEVFKRMRH----SGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKY 460
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
G + D + + LV MY K G++ +F+ RDL+ +N +++ + + + + +F
Sbjct: 461 GFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIF 520
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY--ACMIDLY 539
+ML +G P+ TF++IL + V++G++ + K S + + + ++D+Y
Sbjct: 521 NQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIV---KNSLDGNDFVGTALVDMY 577
Query: 540 GRANQLEKA 548
+ LE A
Sbjct: 578 AKNRFLEDA 586
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 174/396 (43%), Gaps = 67/396 (16%)
Query: 118 DEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYE 177
D R+ +++ L C ++ G+ +H ++K+ + +SL+++Y+KC
Sbjct: 123 DSKGRLRQYS--GMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSAN 180
Query: 178 EACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQN 237
AC+VF GE+ PE D VSW LI+G+V
Sbjct: 181 YACKVF----------------------GEI----------PE-RDVVSWTALITGFVAE 207
Query: 238 GDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVS 297
G + LF M GV NE T+A+AL AC +++ K++H+ +K G S+ FV
Sbjct: 208 GYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVG 267
Query: 298 SGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVV 357
S +VD+Y KC M AE + L +N+ S
Sbjct: 268 SALVDLYAKCGEMVLAERVFLCMPKQNAVS------------------------------ 297
Query: 358 VWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
W AL +G+ + + E + +L E + L +L CA L G+ +H+
Sbjct: 298 -WNALLNGFAQMGDAEKVLNLFCRMTGSE-INFSKFTLSTVLKGCANSGNLRAGQIVHSL 355
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
+R+G ++D+ + LVDMYSKCG A +F + D+V ++ +I C G +A
Sbjct: 356 AIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREA 415
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
+F+ M G+ P+ T +++SA G + GE
Sbjct: 416 AEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGE 451
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 162/394 (41%), Gaps = 74/394 (18%)
Query: 262 FASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKG 321
++ L C ++ K IH V+K+G+ + + + +V+VY KC + NYA +
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKV----- 185
Query: 322 VRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSE 381
F + E++VV WTAL +G+V +L E
Sbjct: 186 --------------------------FGEIPERDVVSWTALITGFVAEGYGSGAVNLFCE 219
Query: 382 FVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
+ +EGV + L AC++ L GK++HA +++G D + S LVD+Y+KCG
Sbjct: 220 -MRREGVEANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCG 278
Query: 442 NMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
M AE +F +++ V +N ++ +A G EK + LF M I T +L
Sbjct: 279 EMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLK 338
Query: 502 AFRHCGSVEMGEKYFNSMTADYKISPETDHY--ACMIDLYGRANQLEKAIEFMKSIPTEE 559
+ G++ G+ +S+ +I E D + C++D+Y +
Sbjct: 339 GCANSGNLRAGQ-IVHSLA--IRIGCELDEFISCCLVDMYSKCG---------------- 379
Query: 560 DAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRK 619
LAG+A + +R+E + + + +G E + K
Sbjct: 380 -------------------LAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFK 420
Query: 620 QMR--GMKGNRFAGCSWVYVEHEIHIFTVGDVSH 651
+MR G+ N+F S V ++ G+ H
Sbjct: 421 RMRHSGVIPNQFTLASLVSAATDLGDLYYGESIH 454
>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130 [Vitis vinifera]
gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 203/673 (30%), Positives = 322/673 (47%), Gaps = 105/673 (15%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACI 67
+ L H A+ G I N LI +Y K + + + +FD M ERNV
Sbjct: 22 QGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERNV----------- 70
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFT 127
V++ +++CGY+ EG +L L EM + ++ +EFT
Sbjct: 71 --------------------VSWTALMCGYLQ-EGNAKGSLALLCEMGYSG--VKPNEFT 107
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
+++L C L V G Q+H VK+ + ++ IDMYSKC
Sbjct: 108 FSTSLKACGALGVVENGMQIHGMCVKSGFEWVSVVGNATIDMYSKC-------------- 153
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
G + MA + F + P + VSWN +I+G+ G+ + L LF
Sbjct: 154 ------------------GRIGMAEQVFNKMP-FRNLVSWNAMIAGHTHEGNGRKSLVLF 194
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL---ISNPFVSSGIVDVY 304
RM G +E TF S L AC L ++ +IH+ ++ G I N ++S IVD+Y
Sbjct: 195 QRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRN-IIASAIVDLY 253
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
KC G + EA++ FD + +KN++ W+AL
Sbjct: 254 AKC-------------------------------GYLFEAQKVFDRIEQKNLISWSALIQ 282
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVV-TDALILVILLGACALQAALHPGKEIHAYILRMGV 423
G+ + N DL + +E V D +L I++G A A + GK++H YIL++
Sbjct: 283 GFAQEGNLLEAMDLFRQL--RESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPS 340
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
+D + ++++DMY KCG AE +F R++V + VMI Y HG EKAI LF
Sbjct: 341 GLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNR 400
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRAN 543
M GI+ D V ++A+LSA H G + ++YF+ + ++++ P +HYACM+D+ GRA
Sbjct: 401 MQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAG 460
Query: 544 QLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLAN 603
QL++A ++++ + + I + L+ CR++ N E+ E E L R++ +N YV ++N
Sbjct: 461 QLKEAKNLIENMKLKPNEGIWQTLLSACRVHGNLEIGREVGEILFRMDTDNPVNYVMMSN 520
Query: 604 VYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAI 663
+YA G W E R+RK ++ + AG SWV + EIH F GD +HP T I+ +L
Sbjct: 521 IYAEAGYWKECERVRKLVKAKGLKKEAGQSWVEINKEIHFFYGGDDTHPLTEKIHEMLKE 580
Query: 664 FTGELYEIAGAFY 676
+ E G Y
Sbjct: 581 MERRVKEEVGYAY 593
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 1/162 (0%)
Query: 395 LVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFI 454
L LL C+ G ++HA + MG D + + L+DMY KC + A +F +
Sbjct: 7 LAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRML 66
Query: 455 ERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
ER++V + ++ Y G+ + ++ L EM G+KP+ TF L A G VE G +
Sbjct: 67 ERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQ 126
Query: 515 YFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIP 556
+ M + ID+Y + ++ A + +P
Sbjct: 127 -IHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMP 167
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 187/602 (31%), Positives = 310/602 (51%), Gaps = 42/602 (6%)
Query: 62 IISACIKS---HDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSAD 118
+I C+ S L A S+F++ + + +N+M+ G+ + +L L++ M S
Sbjct: 1 LIELCVPSPHFDGLPYATSVFETIQEPNQLIWNTMIRGHALSSD-PVSSLTLYVCMVSLG 59
Query: 119 EHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEE 178
+ + +T L C K G+Q+H ++K D + +SLI MY + E+
Sbjct: 60 --LLPNSYTFPFLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLED 117
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
A +VF+ + +++S A++ G++ A K F P + D VSWN +ISGY + G
Sbjct: 118 AYKVFDRSSHR-DVVSYTALITGYASRGDIRSAQKLFDEIP-VKDVVSWNAMISGYAETG 175
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
+E L+LF M + VR +E T+ + LSAC +++ +++HSWV +G SN + +
Sbjct: 176 CYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVN 235
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
++D+Y KC G +E A F L+ K+V+
Sbjct: 236 ALIDLYSKC-------------------------------GEVETACGLFQGLSYKDVIS 264
Query: 359 WTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
W L GY + L E + + G + + ++ +L ACA A+ G+ IH YI
Sbjct: 265 WNTLIGGYTHMNLYKEALLLFQEML-RSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYI 323
Query: 419 LRM--GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
+ GV L ++L+DMY+KCG++ A +F + + + L +N MI +A HG +
Sbjct: 324 DKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADA 383
Query: 477 AILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMI 536
+ LF M + GI+PD +TFV +LSA H G +++G F SMT DYK++P+ +HY CMI
Sbjct: 384 SFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMI 443
Query: 537 DLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKA 596
DL G + ++A E + ++ E D VI S L C+++ N ELA + L+++E N +
Sbjct: 444 DLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNLIKIEPENPS 503
Query: 597 RYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNA 656
Y+ L+N+YA+ G W ++ RIR + G + GCS + V+ + F VGD HP+
Sbjct: 504 SYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVDSVVFEFVVGDKFHPQNRE 563
Query: 657 IY 658
IY
Sbjct: 564 IY 565
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 154/579 (26%), Positives = 248/579 (42%), Gaps = 121/579 (20%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
+S E H Q +K G L LI +Y ++ L ++ K+FD R+V S+
Sbjct: 76 KSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTA 135
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I+ D++ A+ LFD P KD+V++N+M+ GY Y+ +AL+LF EM + +
Sbjct: 136 LITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYK-EALELFEEMMKMN--V 192
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
R DE T + L+ C ++ GRQ+H+++ D++ V++LID+YSKC E AC
Sbjct: 193 RPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACG 252
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F+G + D +SWNTLI GY +
Sbjct: 253 LFQGLS---------------------------------YKDVISWNTLIGGYTHMNLYK 279
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLK--NGLISNPFVSSG 299
E L LF M +G N+ T S L AC L + + IH ++ K G+ + + +
Sbjct: 280 EALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS 339
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
++D+Y KC G++E A + F+S+ K++ W
Sbjct: 340 LIDMYAKC-------------------------------GDIEAAHQVFNSMLHKSLSSW 368
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
A+ G+ +A FDL S + K G+ D + V LL AC+ L G+ +I
Sbjct: 369 NAMIFGFAMHGRADASFDLFSR-MRKIGIEPDDITFVGLLSACSHSGMLDLGR----HIF 423
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
R Q D K+ L Y MI H G ++A
Sbjct: 424 RSMTQ-DYKMTPKLEH-------------------------YGCMIDLLGHSGLFKEA-- 455
Query: 480 LFEEMLEK-GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE-TDHYACMID 537
EEM+ ++PD V + ++L A + G+VE+ E + ++ KI PE Y + +
Sbjct: 456 --EEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNLI---KIEPENPSSYILLSN 510
Query: 538 LYGRANQLEKAIEF--------MKSIP----TEEDAVIL 564
+Y A + E MK +P E D+V+
Sbjct: 511 IYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVDSVVF 549
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 185/593 (31%), Positives = 306/593 (51%), Gaps = 71/593 (11%)
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFT 127
K + ++A+ LF +DLV +++++ + GY +AL LF EMQ ++ ++ + T
Sbjct: 376 KCGETEKAKQLFWGLQGRDLVAWSAIIAALVQT-GYPEEALSLFQEMQ--NQKMKPNRVT 432
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
+ S L C L + G+ +H F VK D+ ++L+ MY+KC
Sbjct: 433 LMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKC-------------- 478
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
G AL TF R D V+WN+LI+GY Q GD + +F
Sbjct: 479 ------------------GFFTAALTTFNRMSS-RDIVTWNSLINGYAQIGDPYNAIDMF 519
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
++ + + + T + AC L ++ IH ++K G S+ V + ++D+Y KC
Sbjct: 520 YKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKC 579
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
++ AE + + F+ K+ V W + + Y+
Sbjct: 580 GSLPSAEFLF----NKTDFT--------------------------KDEVTWNVIIAAYM 609
Query: 368 KAQNCEALFDLLSEF--VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
QN A + +S F + E +++ V +L A A AA G HA I++MG
Sbjct: 610 --QNGHAK-EAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLS 666
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
+ + ++L+DMY+KCG + Y+E +F +D V +N M++ YA HGH ++AI LF M
Sbjct: 667 NTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQ 726
Query: 486 EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQL 545
E ++ D+V+FV++LSA RH G VE G K F+SM+ Y I P+ +HYACM+DL GRA
Sbjct: 727 ESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLF 786
Query: 546 EKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVY 605
++ + F+K +P E DA + G+ L CR++ N +L A + L++LE N A +V L+++Y
Sbjct: 787 DETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIY 846
Query: 606 AAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
A G WA+ G+ R +M + + GCSWV +++++H F VGD SHP+ +++
Sbjct: 847 AQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMH 899
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 140/552 (25%), Positives = 241/552 (43%), Gaps = 112/552 (20%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N +I K D+ AR +FD +D V++ +M+ GY + G + L+LF +M+ +
Sbjct: 267 NGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAH-NGCFVEVLELFDKMKLGN- 324
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
+R+++ + S + +++ G+++H ++ D+ + L+ MY+KC
Sbjct: 325 -VRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKC------ 377
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
GE E A + FW + D V+W+ +I+ VQ G
Sbjct: 378 --------------------------GETEKAKQLFWGL-QGRDLVAWSAIIAALVQTGY 410
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
EE L LF M ++ N T S L AC L +K K IH + +K + S+ +
Sbjct: 411 PEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTA 470
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
+V +Y KC G A F+ ++ +++V W
Sbjct: 471 LVSMYAKC-------------------------------GFFTAALTTFNRMSSRDIVTW 499
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
+L +GY + + D+ + + + DA +V ++ ACAL L G IH I+
Sbjct: 500 NSLINGYAQIGDPYNAIDMFYK-LRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIV 558
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIF-QNFIERDLVLYNVMIACYAHHGHEEKAI 478
++G + D + + L+DMY+KCG++ AE +F + +D V +NV+IA Y +GH ++AI
Sbjct: 559 KLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAI 618
Query: 479 LLFEEMLEKGIKPDAVTFVAI------LSAFRH--------------------------- 505
F +M + P++VTFV++ L+AFR
Sbjct: 619 SSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMY 678
Query: 506 --CGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI---EFMKSIPTEED 560
CG + EK FN M D+K +T + M+ Y ++AI M+ + D
Sbjct: 679 AKCGQLXYSEKLFNEM--DHK---DTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQID 733
Query: 561 AVILGSFLNVCR 572
+V S L+ CR
Sbjct: 734 SVSFVSVLSACR 745
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 142/552 (25%), Positives = 234/552 (42%), Gaps = 107/552 (19%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTI 62
+LNL+E + H + + GL L+ +YSK L+ +R++FD+MP+R+V +WN +
Sbjct: 142 ALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAM 201
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
I+ +S D +A F S + E L LF
Sbjct: 202 IAGLSQSEDPCEAVDFFRSMQ-------------LVGVEPSSVSLLNLFP---------- 238
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
+C KL N+ R +H ++ + D S + LID+YSKC + A RV
Sbjct: 239 ----------GIC-KLSNIELCRSIHGYVFR--RDFSSAVSNGLIDLYSKCGDVDVARRV 285
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
F+ ++ D VSW T+++GY NG E
Sbjct: 286 FDQMVDQ---------------------------------DDVSWGTMMAGYAHNGCFVE 312
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
L+LF +M VR N+ + SA A +++ KEIH L+ + S+ V++ ++
Sbjct: 313 VLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMV 372
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
+Y KC G E+A++ F L +++V W+A+
Sbjct: 373 MYAKC-------------------------------GETEKAKQLFWGLQGRDLVAWSAI 401
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
+ V+ E L E + + + + + L+ +L ACA + L GK IH + ++
Sbjct: 402 IAALVQTGYPEEALSLFQE-MQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKAD 460
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
+ D + LV MY+KCG T A F RD+V +N +I YA G AI +F
Sbjct: 461 MDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFY 520
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA--CMIDLYG 540
++ I PDA T V ++ A ++ G + K+ E+D + +ID+Y
Sbjct: 521 KLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIV---KLGFESDCHVKNALIDMYA 577
Query: 541 RANQLEKAIEFM 552
+ L A EF+
Sbjct: 578 KCGSLPSA-EFL 588
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 125/501 (24%), Positives = 219/501 (43%), Gaps = 74/501 (14%)
Query: 70 HDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVT 129
H ARS+FDS+P+ + +NSM+ Y ++ Y +AL+++ M ++ + D++T T
Sbjct: 77 HKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYN-EALEMYYCM--VEKGLEPDKYTFT 133
Query: 130 STLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEE 189
L C LN+ G H + + + F + L+DMYSK
Sbjct: 134 FVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKM---------------- 177
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
G+++ A + F + P+ D V+WN +I+G Q+ D E + F
Sbjct: 178 ----------------GDLKRAREVFDKMPK-RDVVAWNAMIAGLSQSEDPCEAVDFFRS 220
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
M GV + + + C L N++ + IH +V + S VS+G++D+Y KC
Sbjct: 221 MQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSA--VSNGLIDLYSKC-- 276
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
G+++ ARR FD + +++ V W + +GY
Sbjct: 277 -----------------------------GDVDVARRVFDQMVDQDDVSWGTMMAGYAHN 307
Query: 370 QNCEALFDLLSEFVTKEG-VVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK 428
+ +L + K G V + + V A A L GKEIH L+ + D
Sbjct: 308 GCFVEVLELFDKM--KLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDIL 365
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
+ + L+ MY+KCG A+ +F RDLV ++ +IA G+ E+A+ LF+EM +
Sbjct: 366 VATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQK 425
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
+KP+ VT ++IL A +++G K + T + + ++ +Y + A
Sbjct: 426 MKPNRVTLMSILPACADLSLLKLG-KSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAA 484
Query: 549 IEFMKSIPTEEDAVILGSFLN 569
+ + + D V S +N
Sbjct: 485 LTTFNRM-SSRDIVTWNSLIN 504
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 100/208 (48%), Gaps = 4/208 (1%)
Query: 307 CENMN---YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
C+++N + +++ G ++ SI+ +I YSL + AR FDS + ++W ++
Sbjct: 42 CKHLNPLLQIHAQIIVSGFKHHHSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMI 101
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
Y +++ ++ V K G+ D +L AC L G H I R G+
Sbjct: 102 RAYTRSKQYNEALEMYYCMVEK-GLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGL 160
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
+ D + + LVDMYSK G++ A +F +RD+V +N MIA + +A+ F
Sbjct: 161 ERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRS 220
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEM 511
M G++P +V+ + + ++E+
Sbjct: 221 MQLVGVEPSSVSLLNLFPGICKLSNIEL 248
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 10/183 (5%)
Query: 380 SEFVT-KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYS 438
SEF + T+ L LL +C L+P +IHA I+ G + I+ L+++YS
Sbjct: 19 SEFPSLSSSTYTNYLHYPRLLSSCK---HLNPLLQIHAQIIVSGFKHHHS-ITHLINLYS 74
Query: 439 KCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVA 498
A +F + +L+N MI Y +A+ ++ M+EKG++PD TF
Sbjct: 75 LFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTF 134
Query: 499 ILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY--ACMIDLYGRANQLEKAIEFMKSIP 556
+L A G++ + E + D + E D + A ++D+Y + L++A E +P
Sbjct: 135 VLKAC--TGALNLQEGVWFHGEIDRR-GLERDVFIGAGLVDMYSKMGDLKRAREVFDKMP 191
Query: 557 TEE 559
+
Sbjct: 192 KRD 194
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 100/255 (39%), Gaps = 39/255 (15%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
+E + H I+ G T+ N LI +Y+K L S KLF+EM ++ SW
Sbjct: 649 FREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSW------ 702
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
N+ML GY G+ A+ LF MQ + +++D
Sbjct: 703 -------------------------NAMLSGYA-VHGHGDRAIALFSLMQ--ESQVQIDS 734
Query: 126 FTVTSTLNLCVKLLNVGFGRQL-HAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
+ S L+ C V GR++ H+ K + ++D+ + ++E +
Sbjct: 735 VSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIK 794
Query: 185 GCTEEVNLISKNAMVAACCREGEM---EMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
E + A++ +C + E+AL + N A + L S Y Q+G
Sbjct: 795 VMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPA-HFVVLSSIYAQSGRWA 853
Query: 242 EGLKLFVRMGENGVR 256
+ K +M + G++
Sbjct: 854 DAGKARSKMNDLGLK 868
>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
Length = 734
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 182/614 (29%), Positives = 309/614 (50%), Gaps = 38/614 (6%)
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+ S+ + + L A +FD +P + L + S++ G EG AD ++ F EM
Sbjct: 64 VPSSSVIARGLHNAHRVFDGTPTRSLPAWTSIISGCAR-EGRHADGMRAFAEMLDECGAT 122
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+ F + L C L +V GR++H +++++ ++++DMY+KC + A R
Sbjct: 123 APNAFVLAGVLRCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARR 182
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
F G + + S N ++ AC ++G++ A + F + L D SWNT++SG +++G
Sbjct: 183 AF-GAMAQKDATSWNIVIRACLQDGDLVGATQLF-DESSLRDVSSWNTIVSGLMRHGHTT 240
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E L +M GV ++ +T++ + L + +++H V+ L + FV ++
Sbjct: 241 EALGRLQQMVRAGVTFSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLM 300
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFD---SLTEKNVVV 358
D+YCKC G ME A FD TE
Sbjct: 301 DMYCKC-------------------------------GEMESALSIFDRWSDFTEDRQFA 329
Query: 359 WTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
W+ + +GYV+ E + + +EGV IL + ACA + G+++H ++
Sbjct: 330 WSTMVAGYVQNGREEEALEFFRRML-REGVPAGQFILTSVASACANAGMVEQGRQVHGFV 388
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
++G + D L S +VDMYSK G++ A IF++ +++ L+ M+ YA HG A+
Sbjct: 389 EKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQGRMAL 448
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
+F M + I P+ +T VA+LSA H G V G YFN M +Y I P T+HY CM+DL
Sbjct: 449 EIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHYNCMVDL 508
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARY 598
YGRA L+KA F++ +AV+ + L+ CRL+++ E A A EKL++LE + Y
Sbjct: 509 YGRAGLLDKAKNFIEENKISHEAVVWKTLLSACRLHKHIEYAQLASEKLVQLEQYDAGSY 568
Query: 599 VQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
V ++N+YA W + ++R M+ + + G SW+++++ +H F D SHP++ IY
Sbjct: 569 VLMSNMYATNNKWLDTFKLRSSMKERRVRKQPGQSWIHLKNVVHRFVALDTSHPRSAEIY 628
Query: 659 SVLAIFTGELYEIA 672
+ L L E+
Sbjct: 629 AYLEKLMERLKEMG 642
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 123/480 (25%), Positives = 212/480 (44%), Gaps = 75/480 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +++G+ + N ++ +Y+K +R+ F M +++ SWN +I AC++ DL
Sbjct: 149 HGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSWNIVIRACLQDGDL 208
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
A LFD S +D+ ++N+++ G + G+ +AL +M A + +T +
Sbjct: 209 VGATQLFDESSLRDVSSWNTIVSGLMR-HGHTTEALGRLQQMVRAG--VTFSNYTYSMVF 265
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
L L + GRQLH +V + F SL+DMY KC
Sbjct: 266 ALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKC------------------- 306
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELND--AVSWNTLISGYVQNGDAEEGLKLFVRM 250
GEME AL F R + + +W+T+++GYVQNG EE L+ F RM
Sbjct: 307 -------------GEMESALSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRM 353
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
GV + S SAC V+ +++H +V K G + ++S IVD+Y K
Sbjct: 354 LREGVPAGQFILTSVASACANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSK---- 409
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
G++E+A R F S KNV +WT + Y
Sbjct: 410 ---------------------------SGSLEDACRIFRSAQTKNVALWTTMLCSYASHG 442
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL---RMGVQMDK 427
++ S + E ++ + + LV +L AC+ + G H + L G+ +
Sbjct: 443 QGRMALEIFSR-MKAEKIMPNEITLVAVLSACSHSGLVSDG--YHYFNLMQEEYGIVPNT 499
Query: 428 KLISTLVDMYSKCGNMTYAE-IIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
+ + +VD+Y + G + A+ I +N I + V++ +++ H H E A L E++++
Sbjct: 500 EHYNCMVDLYGRAGLLDKAKNFIEENKISHEAVVWKTLLSACRLHKHIEYAQLASEKLVQ 559
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 220/727 (30%), Positives = 345/727 (47%), Gaps = 134/727 (18%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H Q +K GL N L+ +Y+K +R+ R++FDEM +R+V SW
Sbjct: 125 HCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSW------------- 171
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
NS+L GY + + +LF MQ E R D +TV++ +
Sbjct: 172 ------------------NSLLTGY-SWNRFNDQVWELFCLMQV--EGYRPDYYTVSTVI 210
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
V G Q+HA +VK + +SLI M SK +A VF+ N+
Sbjct: 211 AALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFD------NM 264
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+K+ +VSWN++I+G+V NG E + F M
Sbjct: 265 ENKD---------------------------SVSWNSMIAGHVINGQDLEAFETFNNMQL 297
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G + TFAS + +C L+ + + +H LK+GL +N V + ++ KC+ ++
Sbjct: 298 AGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDD 357
Query: 313 AESML-LLKGVRNSFSISSMIVGYSLQGNMEEA-------RR------HFDSLT------ 352
A S+ L+ GV++ S ++MI GY G+ ++A RR HF T
Sbjct: 358 AFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTVQH 417
Query: 353 ----------------EKNVVVWTALFSGYVKAQNCE---ALFDLLS------------- 380
EK+ V TAL +VK N +F+L+
Sbjct: 418 AVFISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAG 477
Query: 381 --------------EFVTKEGVVTDALILVILLGAC-ALQAALHPGKEIHAYILRMGVQM 425
+T+EG+ + ++ AC A A++ GK+ HAY +++ +
Sbjct: 478 YAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNN 537
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
+ S+LV +Y+K GN+ A IF+ ERDLV +N MI+ YA HG +KA+ +FEEM
Sbjct: 538 ALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQ 597
Query: 486 EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQL 545
++ ++ DA+TF+ ++SA H G V G+ YFN M D+ I+P +HY+CMIDLY RA L
Sbjct: 598 KRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGML 657
Query: 546 EKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVY 605
KA++ + +P A + L R++RN EL A EK++ LE + A YV L+N+Y
Sbjct: 658 GKAMDIINGMPFPPAATVWRIVLAASRVHRNIELGKLAAEKIISLEPQHSAAYVLLSNIY 717
Query: 606 AAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFT 665
AA GNW E +RK M + + G SW+ V+++ + F GD+SHP ++ IYS L+
Sbjct: 718 AAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEVKNKTYSFLAGDLSHPLSDHIYSKLSELN 777
Query: 666 GELYEIA 672
L ++
Sbjct: 778 TRLRDVG 784
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 149/310 (48%), Gaps = 37/310 (11%)
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
R+ + A + F + P L D N L+ Y + +E L LFV + +G+ + +T +
Sbjct: 48 RDSDPRFAQQLFDQTP-LRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMS 106
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
LS C G N +++H +K GL+ + V + +VD+Y K
Sbjct: 107 CVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKT---------------- 150
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV 383
GN+ + RR FD + +++VV W +L +GY + + +++L +
Sbjct: 151 ---------------GNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFC-LM 194
Query: 384 TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNM 443
EG D + ++ A A Q A+ G +IHA ++++G + ++ + ++L+ M SK G +
Sbjct: 195 QVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGML 254
Query: 444 TYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAF 503
A ++F N +D V +N MIA + +G + +A F M G KP TF +++
Sbjct: 255 RDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVI--- 311
Query: 504 RHCGSV-EMG 512
+ C S+ E+G
Sbjct: 312 KSCASLKELG 321
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 133/573 (23%), Positives = 241/573 (42%), Gaps = 113/573 (19%)
Query: 67 IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEF 126
++ D + A+ LFD +P +DL +N +L Y + + +AL LF+ + + + D +
Sbjct: 47 LRDSDPRFAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQ-EALHLFVSLYRSG--LSPDSY 103
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
T++ L++C N G Q+H VK +SL+DMY+K + RVF+
Sbjct: 104 TMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFD-- 161
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
EM + D VSWN+L++GY N ++ +L
Sbjct: 162 ----------------------EMGDR---------DVVSWNSLLTGYSWNRFNDQVWEL 190
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
F M G R + +T ++ ++A V +IH+ V+K G + V + ++
Sbjct: 191 FCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLI----- 245
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
SML S G + +AR FD++ K+ V W ++ +G+
Sbjct: 246 --------SML------------------SKSGMLRDARVVFDNMENKDSVSWNSMIAGH 279
Query: 367 V-KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
V Q+ EA F+ + T A + + +CA L + +H L+ G+
Sbjct: 280 VINGQDLEA-FETFNNMQLAGAKPTHATFASV-IKSCASLKELGLVRVLHCKTLKSGLST 337
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFIE-RDLVLYNVMIACYAHHGHEEKAILLFEEM 484
++ +++ L+ +KC + A +F + +V + MI+ Y +G ++A+ LF M
Sbjct: 338 NQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLM 397
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
+G+KP+ T+ IL+ +H +V + E + + +Y+ S ++D + +
Sbjct: 398 RREGVKPNHFTYSTILTV-QH--AVFISEIHAEVIKTNYEKSSSVG--TALLDAFVKIGN 452
Query: 545 LEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANV 604
+ A++ + I T++ VI S A LAG
Sbjct: 453 ISDAVKVFELIETKD--VIAWS----------AMLAG----------------------- 477
Query: 605 YAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWV 635
YA G E +I Q+ G+K N F CS +
Sbjct: 478 YAQAGETEEAAKIFHQLTREGIKPNEFTFCSII 510
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 196/663 (29%), Positives = 334/663 (50%), Gaps = 77/663 (11%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+ +E++ + K G+T + T + ++ ++ + E +++ + + S+NT+++
Sbjct: 533 DYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVN 592
Query: 65 ACI----KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
+ I KS ++ A LFD +D+V++NSM+ G + G+ AL+ F++M
Sbjct: 593 SLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCV-MNGFSHSALEFFVQMLIL--R 649
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
+ +D T+ +++ C + ++ GR LH VK ++L+DMYSKC +A
Sbjct: 650 VGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAI 709
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+ FE +M KT VSW +LI+ YV+ G
Sbjct: 710 QAFE------------------------KMGQKT---------VVSWTSLIAAYVREGLY 736
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
++ ++LF M GV + ++ S L AC ++ +++H+++ KN + VS+ +
Sbjct: 737 DDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNAL 796
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
+D+Y KC G+MEEA F + K++V W
Sbjct: 797 MDMYAKC-------------------------------GSMEEAYLVFSQIPVKDIVSWN 825
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
+ GY K L +E + KE D + + LL AC AAL G+ IH ILR
Sbjct: 826 TMIGGYSKNSLPNEALKLFAE-MQKESR-PDGITMACLLPACGSLAALEIGRGIHGCILR 883
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
G + + + L+DMY KCG++ +A ++F E+DL+ + VMI+ HG +AI
Sbjct: 884 NGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIAT 943
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
F++M GIKPD +TF +IL A H G + G +FNSM ++ + P+ +HYACM+DL
Sbjct: 944 FQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLA 1003
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQ 600
R L KA ++++P + DA I G+ L CR++ + ELA + E + LE +N YV
Sbjct: 1004 RTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVFELEPDNAGYYVL 1063
Query: 601 LANVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
LAN+YA W E+ ++R+++ RG+K + GCSW+ V+ + F D +HP+ +I+
Sbjct: 1064 LANIYAEAEKWEEVKKLRERIGKRGLK--KSPGCSWIEVQGKFTTFVSADTAHPQAKSIF 1121
Query: 659 SVL 661
S+L
Sbjct: 1122 SLL 1124
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 142/556 (25%), Positives = 231/556 (41%), Gaps = 143/556 (25%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTI 62
SL+L AL H Q +KA + + N L+ +YSK L ++ + F++M ++ V SW ++
Sbjct: 669 SLSLGRAL--HGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSL 726
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
I+A ++ EG DA++LF EM+S + +
Sbjct: 727 IAAYVR--------------------------------EGLYDDAIRLFYEMES--KGVS 752
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVS-SLIDMYSKCRCYEEACR 181
D +++TS L+ C ++ GR +H + ++ +N A VS +L+DMY+KC EEA
Sbjct: 753 PDVYSMTSVLHACACGNSLDKGRDVHNY-IRKNNMALCLPVSNALMDMYAKCGSMEEAYL 811
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
VF Q + D VSWNT+I GY +N
Sbjct: 812 VFS---------------------------------QIPVKDIVSWNTMIGGYSKNSLPN 838
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E LKLF M + R + T A L AC L ++ + IH +L+NG S V++ ++
Sbjct: 839 EALKLFAEMQKES-RPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALI 897
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D+Y KC G++ AR FD + EK+++ WT
Sbjct: 898 DMYVKC-------------------------------GSLVHARLLFDMIPEKDLITWTV 926
Query: 362 LFSGY-VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
+ SG + EA+ + G+ D + +L AC+ H+ +L
Sbjct: 927 MISGCGMHGLGNEAIATFQKMRIA--GIKPDEITFTSILYACS-----------HSGLLN 973
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
G +I S+C +E L Y M+ A G+ KA L
Sbjct: 974 EGWGFFNSMI-------SECN------------MEPKLEHYACMVDLLARTGNLSKAYNL 1014
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE-TDHYACMIDLY 539
E M IKPDA + A+L R VE+ EK + +++ P+ +Y + ++Y
Sbjct: 1015 IETM---PIKPDATIWGALLCGCRIHHDVELAEKVAEHV---FELEPDNAGYYVLLANIY 1068
Query: 540 GRANQLEKAIEFMKSI 555
A + E+ + + I
Sbjct: 1069 AEAEKWEEVKKLRERI 1084
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 127/529 (24%), Positives = 219/529 (41%), Gaps = 78/529 (14%)
Query: 91 NSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAF 150
N+ +C + E L+ +E+ + +D +S L LC + + G+ +H+
Sbjct: 422 NTKICKFC-----EVGDLRNAVELLRMSQKSELDLNAYSSILQLCAEHKCLQEGKMVHSV 476
Query: 151 MVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEM 210
+ G + L+ MY C E R+F+ +++S N
Sbjct: 477 ISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFD------HILSDN-------------- 516
Query: 211 ALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACC 270
K F WN ++S Y + GD E + LF +M + G+ N +TF+ L
Sbjct: 517 --KVFL----------WNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFA 564
Query: 271 GLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISS 330
L V K IH V K G S V ++S
Sbjct: 565 TLGRVGECKRIHGCVYKLGFGSYNTV-------------------------------VNS 593
Query: 331 MIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV-KAQNCEALFDLLSEFVTKEGVV 389
+I Y G ++ A + FD L +++VV W ++ SG V + AL + + + GV
Sbjct: 594 LIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGV- 652
Query: 390 TDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEII 449
D LV + ACA +L G+ +H ++ + +TL+DMYSKCGN+ A
Sbjct: 653 -DLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQA 711
Query: 450 FQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSV 509
F+ ++ +V + +IA Y G + AI LF EM KG+ PD + ++L A S+
Sbjct: 712 FEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSL 771
Query: 510 EMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLN 569
+ G N + + ++ ++D+Y + +E+A IP +D V + +
Sbjct: 772 DKGRDVHNYIRKN-NMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPV-KDIVSWNTMIG 829
Query: 570 VCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWA--EMGR 616
N L EA + ++ ++ + +A + A G+ A E+GR
Sbjct: 830 GYSKN---SLPNEALKLFAEMQKESRPDGITMACLLPACGSLAALEIGR 875
>gi|356532382|ref|XP_003534752.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09410-like [Glycine max]
Length = 669
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 199/638 (31%), Positives = 317/638 (49%), Gaps = 65/638 (10%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLV 88
N I I +H L E+RKLFDEMP+R+ S+N++I+ +K+ DL +A ++F P +++V
Sbjct: 69 NVEITILGRHGKLDEARKLFDEMPQRDDVSYNSMIAVYLKNKDLLEAETVFKEMPQRNVV 128
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLH 148
++M+ GY G DA K+F M +
Sbjct: 129 AESAMIDGYAKV-GRLDDARKVFDNMTQRN------------------------------ 157
Query: 149 AFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEM 208
F+ +SLI Y C EEA +F+ E N++S +V R G M
Sbjct: 158 -----------AFSWTSLISGYFSCGKIEEALHLFDQMPER-NVVSWTMVVLGFARNGLM 205
Query: 209 EMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVR-WNEHTFASALS 267
+ A + F+ PE N ++W ++ Y+ NG E KLF+ M E VR WN +S
Sbjct: 206 DHAGRFFYLMPEKN-IIAWTAMVKAYLDNGCFSEAYKLFLEMPERNVRSWN-----IMIS 259
Query: 268 ACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFS 327
C V A + + +S + SG+ + + + A L ++ +
Sbjct: 260 GCLRANRVDEAIGLFESMPDRNHVSWTAMVSGL----AQNKMIGIARKYFDLMPYKDMAA 315
Query: 328 ISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC-EAL--FDLLSEFVT 384
++MI +G M+EAR+ FD + EKNV W + GY + EAL F L+
Sbjct: 316 WTAMITACVDEGLMDEARKLFDQIPEKNVGSWNTMIDGYARNSYVGEALNLFVLMLRSCF 375
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
+ T ++ G L A HA ++ +G + + L + L+ +YSK G++
Sbjct: 376 RPNETTMTSVVTSCDGMVELMQA-------HAMVIHLGFEHNTWLTNALITLYSKSGDLC 428
Query: 445 YAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR 504
A ++F+ +D+V + MI Y++HGH A+ +F ML GIKPD VTFV +LSA
Sbjct: 429 SARLVFEQLKSKDVVSWTAMIVAYSNHGHGHHALQVFARMLVSGIKPDEVTFVGLLSACS 488
Query: 505 HCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSI-PTEEDAVI 563
H G V G + F+S+ Y ++P+ +HY+C++D+ GRA +++A++ + +I P+ D +
Sbjct: 489 HVGLVHQGRRLFDSIKGTYNLTPKAEHYSCLVDILGRAGLVDEAMDVVATIPPSARDEAV 548
Query: 564 LGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRG 623
L + L CRL+ + +A EKLL LE ++ YV LAN YAAEG W E ++RK+MR
Sbjct: 549 LVALLGACRLHGDVAIANSIGEKLLELEPSSSGGYVLLANTYAAEGQWDEFAKVRKRMRE 608
Query: 624 MKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
R G S + + + H+F VG+ SHP+ IY +L
Sbjct: 609 RNVKRIPGYSQIQITGKNHVFVVGERSHPQIEEIYRLL 646
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 180/425 (42%), Gaps = 58/425 (13%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
++ N +I +Y K+ L E+ +F EMP+RNV + + +I K L AR +FD+ +
Sbjct: 97 VSYNSMIAVYLKNKDLLEAETVFKEMPQRNVVAESAMIDGYAKVGRLDDARKVFDNMTQR 156
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR 145
+ ++ S++ GY + E +AL LF +M E V S + + G
Sbjct: 157 NAFSWTSLISGYFSCGKIE-EALHLFDQMP---------ERNVVSWTMVVLGFARNGLMD 206
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
F + + A ++++ Y C+ EA ++F E N+ S N M++ C R
Sbjct: 207 HAGRFFYLMP-EKNIIAWTAMVKAYLDNGCFSEAYKLFLEMPER-NVRSWNIMISGCLRA 264
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQN---------------------------- 237
++ A+ F P+ N VSW ++SG QN
Sbjct: 265 NRVDEAIGLFESMPDRNH-VSWTAMVSGLAQNKMIGIARKYFDLMPYKDMAAWTAMITAC 323
Query: 238 ---GDAEEGLKLFVRMGENGV-RWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISN 293
G +E KLF ++ E V WN A RN + ++ +VL
Sbjct: 324 VDEGLMDEARKLFDQIPEKNVGSWNTMIDGYA-------RNSYVGEALNLFVLMLRSCFR 376
Query: 294 PFVSSGIVDVYCKCENM---NYAESMLLLKGV-RNSFSISSMIVGYSLQGNMEEARRHFD 349
P ++ + V C+ M A +M++ G N++ +++I YS G++ AR F+
Sbjct: 377 PNETT-MTSVVTSCDGMVELMQAHAMVIHLGFEHNTWLTNALITLYSKSGDLCSARLVFE 435
Query: 350 SLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALH 409
L K+VV WTA+ Y + + + + G+ D + V LL AC+ +H
Sbjct: 436 QLKSKDVVSWTAMIVAYSNHGHGHHALQVFARMLV-SGIKPDEVTFVGLLSACSHVGLVH 494
Query: 410 PGKEI 414
G+ +
Sbjct: 495 QGRRL 499
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 101/256 (39%), Gaps = 44/256 (17%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACI 67
E + H I G T TN LI +YSK L +R +F+++ ++V SW
Sbjct: 394 ELMQAHAMVIHLGFEHNTWLTNALITLYSKSGDLCSARLVFEQLKSKDVVSW-------- 445
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFT 127
+M+ Y N G+ AL++F M + I+ DE T
Sbjct: 446 -----------------------TAMIVAYSN-HGHGHHALQVFARMLVSG--IKPDEVT 479
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSN-DASGFAVSSLIDMYSKCRCYEEACRVF--- 183
L+ C + V GR+L + T N S L+D+ + +EA V
Sbjct: 480 FVGLLSACSHVGLVHQGRRLFDSIKGTYNLTPKAEHYSCLVDILGRAGLVDEAMDVVATI 539
Query: 184 -EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVS--WNTLISGYVQNGDA 240
+E L+ A++ AC G++ +A + EL + S + L + Y G
Sbjct: 540 PPSARDEAVLV---ALLGACRLHGDVAIANSIGEKLLELEPSSSGGYVLLANTYAAEGQW 596
Query: 241 EEGLKLFVRMGENGVR 256
+E K+ RM E V+
Sbjct: 597 DEFAKVRKRMRERNVK 612
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 202/647 (31%), Positives = 318/647 (49%), Gaps = 101/647 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A+K GL L +N LI++Y K LR+ +
Sbjct: 345 HCMALKLGLDLMLTVSNSLINMYCK---LRK----------------------------I 373
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
AR++F++ +DL+++NS++ G I E +A+ LF+++ ++ D +T+TS L
Sbjct: 374 GLARTVFNNMSERDLISWNSVIAG-IAQSDLEVEAVCLFMQLLRCG--LKPDHYTMTSVL 430
Query: 133 NLCVKLL-NVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L + +Q+H +KT+N A F ++LID YS+ RC +EA EV
Sbjct: 431 KAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEA---------EV- 480
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
L +N D V+WN ++SGY Q+ D + L+LF M
Sbjct: 481 LFGRNNF------------------------DLVAWNAMMSGYTQSHDGHKTLELFALMH 516
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
+ G R ++ T A+ L C L + K++H++ +K+G + +VSSGI+D+Y KC
Sbjct: 517 KQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKC---- 572
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
G+M A+ FDS+ + V WT L SG ++
Sbjct: 573 ---------------------------GDMSAAQFAFDSIPVPDDVAWTTLISGCIENGE 605
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
E + S+ + GV+ D + L A + AL G++IHA L++ D + +
Sbjct: 606 EERALHVFSQ-MRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGT 664
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
+LVDMY+KCG++ A +F+ ++ +N M+ A HG ++A+ LF++M GIKP
Sbjct: 665 SLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKP 724
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
D VTF+ +LSA H G V KY SM DY I PE +HY+C+ D GRA +++A
Sbjct: 725 DKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAENL 784
Query: 552 MKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNW 611
+ S+ E A + + L CR+ + E KLL LE + + YV L+N+YAA W
Sbjct: 785 IDSMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKW 844
Query: 612 AEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
EM R M+G K + G SW+ V+++IH+F V D S+P+T IY
Sbjct: 845 DEMKLARTMMKGHKVKKDPGFSWIEVKNKIHLFVVDDRSNPQTELIY 891
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 144/619 (23%), Positives = 255/619 (41%), Gaps = 118/619 (19%)
Query: 48 FDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYI-NAEGYEAD 106
+E PER F N +IS K L AR +FD P +DLV++NS+L Y ++EG +
Sbjct: 75 LEENPER--FLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQSSEGVVEN 132
Query: 107 ALKLFIEMQSADEH-IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS 165
+ F+ + + + T++ L LC+ V H + K D F +
Sbjct: 133 VKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGA 192
Query: 166 LIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREG------EMEMALKTFWRQP 219
L+++Y K +E +FE +++ N M+ A G ++ A T P
Sbjct: 193 LVNIYLKFGKVKEGRVLFEEMPYR-DVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHP 251
Query: 220 EL-------------------------NDA------VSWNTLISGYVQNGDAEEGLKLFV 248
NDA +S N ++SGY+ G LK F+
Sbjct: 252 NEITLRLLSRISGDDSEAGQVKSFENGNDASAVSEIISRNKILSGYLHAGQYSALLKCFM 311
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
M E+ + ++ TF L+ L ++ +++H LK GL VS+ ++++YCK
Sbjct: 312 DMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLR 371
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVG--------------------------YSLQGNME 342
+ A ++ R+ S +S+I G Y++ ++
Sbjct: 372 KIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLK 431
Query: 343 EARR-----------HFDSLTEKNVV---VWTALFSGYVK---AQNCEAL-----FDLLS 380
A H ++ NV V TAL Y + + E L FDL++
Sbjct: 432 AASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGRNNFDLVA 491
Query: 381 ---------------------EFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
+ K+G +D L +L C A++ GK++HAY +
Sbjct: 492 WNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAI 551
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
+ G +D + S ++DMY KCG+M+ A+ F + D V + +I+ +G EE+A+
Sbjct: 552 KSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALH 611
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK-YFNSMTADYKISPETDHY--ACMI 536
+F +M G+ PD T + A ++E G + + N++ K++ +D + ++
Sbjct: 612 VFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANAL----KLNCTSDPFVGTSLV 667
Query: 537 DLYGRANQLEKAIEFMKSI 555
D+Y + ++ A K I
Sbjct: 668 DMYAKCGSIDDAYCLFKRI 686
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 170/403 (42%), Gaps = 77/403 (19%)
Query: 143 FGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAAC 202
G+ HA ++ + F V++LI MYSKC
Sbjct: 64 LGKCTHARILALEENPERFLVNNLISMYSKC----------------------------- 94
Query: 203 CREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA-----EEGLKLFVRMGENGVRW 257
G + A + F + PE D VSWN++++ Y Q+ + +E LF + ++ V
Sbjct: 95 ---GSLTYARRVFDKMPE-RDLVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYT 150
Query: 258 NEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC---------- 307
+ T + L C V ++ H + K GL + FV+ +V++Y K
Sbjct: 151 SRMTLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLF 210
Query: 308 ENMNYAESML---LLKG------------VRNSFSIS------------SMIVGY-SLQG 339
E M Y + +L +LK + ++F S S I G S G
Sbjct: 211 EEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITLRLLSRISGDDSEAG 270
Query: 340 NMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILL 399
++ D+ ++ + SGY+ A AL + V + + D + +++L
Sbjct: 271 QVKSFENGNDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESD-LECDQVTFILVL 329
Query: 400 GACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLV 459
+L G+++H L++G+ + + ++L++MY K + A +F N ERDL+
Sbjct: 330 ATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLI 389
Query: 460 LYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
+N +IA A E +A+ LF ++L G+KPD T ++L A
Sbjct: 390 SWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKA 432
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 64/135 (47%), Gaps = 19/135 (14%)
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
GK HA IL + ++ L++ L+ MYSKCG++TYA +F ERDLV +N ++A YA
Sbjct: 65 GKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQ 124
Query: 471 HG-----HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKI 525
+ ++A LLF + + + +T +L H G V E +
Sbjct: 125 SSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHG-------- 176
Query: 526 SPETDHYACMIDLYG 540
YAC I L G
Sbjct: 177 ------YACKIGLDG 185
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 191/604 (31%), Positives = 313/604 (51%), Gaps = 43/604 (7%)
Query: 62 IISACIKSH--DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
II+ C K D++ AR +FD+ P + +N+M+ GY G A+ ++ EM +
Sbjct: 57 IIAFCCKHELGDMEYARMVFDTMPGPNHFVWNNMIKGYSRV-GCPNSAVSMYCEM--LER 113
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
+ DE+T L + V GR+LH +VK ++ F ++LI +YS
Sbjct: 114 GVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYS-------- 165
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
GE+ +A F R + D V+WN +ISGY ++
Sbjct: 166 ------------------------LSGEVSVARGVFDRSSK-GDVVTWNVMISGYNRSKQ 200
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
+E +KLF M V + T S LSAC L+++ K +H +V + + +
Sbjct: 201 FDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENA 260
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
++D+Y C +M+ A + R+ S ++++ G++ G + AR +FD + E++ V W
Sbjct: 261 LIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSW 320
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
TA+ GY++ + + L E + + D +V +L ACA AL G+ I AYI
Sbjct: 321 TAMIDGYLQVNRFKEVLSLFRE-MQAANIKPDEFTMVSILTACAHLGALELGEWIKAYID 379
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
+ +++D + + L+DMY CGN+ A IF RD + + +I A +G+ E+A+
Sbjct: 380 KNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALD 439
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
+F +ML+ I PD VT + +L A H G V+ G+K+F MT + I P HY CM+DL
Sbjct: 440 MFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLL 499
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYV 599
GRA L++A E +K++P + ++++ GS L CR++R+ E+A A +++L LE N A YV
Sbjct: 500 GRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENGAVYV 559
Query: 600 QLANVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
L N+YAA W ++ +RK M RG+K + GCS + + +H F GD HP++ I
Sbjct: 560 LLCNIYAACNRWEKLHEVRKLMMDRGIK--KTPGCSLIEMNGSVHEFVAGDQVHPQSKEI 617
Query: 658 YSVL 661
YS L
Sbjct: 618 YSKL 621
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 183/416 (43%), Gaps = 71/416 (17%)
Query: 191 NLISKNAMVAACCRE--GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
N I ++A CC+ G+ME A F P N V WN +I GY + G + ++
Sbjct: 50 NPIVPAQIIAFCCKHELGDMEYARMVFDTMPGPNHFV-WNNMIKGYSRVGCPNSAVSMYC 108
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
M E GV +E+T+ L VKC +E+H ++K G SN FV + ++ +
Sbjct: 109 EMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHL----- 163
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
YSL G + AR FD ++ +VV W + SGY +
Sbjct: 164 --------------------------YSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNR 197
Query: 369 AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK 428
++ + L E + + V+ ++ LV +L AC+ L+ GK +H Y+ + ++ +
Sbjct: 198 SKQFDESMKLFDE-MERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRV 256
Query: 429 LISTLVDMYSKCGNMTYAEIIFQN-------------------------------FIERD 457
L + L+DMY+ CG+M A IF N ERD
Sbjct: 257 LENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERD 316
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFN 517
V + MI Y ++ + LF EM IKPD T V+IL+A H G++E+GE +
Sbjct: 317 FVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGE-WIK 375
Query: 518 SMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEED----AVILGSFLN 569
+ +I ++ +ID+Y +EKAI ++P + AVI G +N
Sbjct: 376 AYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAIN 431
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/509 (23%), Positives = 242/509 (47%), Gaps = 46/509 (9%)
Query: 9 ALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPE----RNVFSWNTIIS 64
A+ + + ++ G+ T L+ +++ ++ R+L D + + NVF N +I
Sbjct: 103 AVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIH 162
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
S ++ AR +FD S D+VT+N M+ GY ++ ++ +++KLF EM+ +
Sbjct: 163 LYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFD-ESMKLFDEMERM--RVLPS 219
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
T+ S L+ C KL ++ G+++H ++ + ++LIDMY+ C + A +F+
Sbjct: 220 SITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFD 279
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
++IS A+V G++ +A F + PE D VSW +I GY+Q +E L
Sbjct: 280 NMKSR-DVISWTAIVTGFTNLGQVGLARNYFDKMPE-RDFVSWTAMIDGYLQVNRFKEVL 337
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
LF M ++ +E T S L+AC L ++ + I +++ KN + + FV + ++D+Y
Sbjct: 338 SLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMY 397
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
C GN+E+A R F+++ ++ + WTA+
Sbjct: 398 FNC-------------------------------GNVEKAIRIFNAMPHRDKISWTAVIF 426
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI-LRMGV 423
G E D+ S+ + K + D + + +L AC + GK+ A + + G+
Sbjct: 427 GLAINGYGEEALDMFSQML-KASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGI 485
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKAILLFE 482
+ + +VD+ + G++ A + +N ++ + +++ ++ H EE A + +
Sbjct: 486 EPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQ 545
Query: 483 EMLEKGIKPD-AVTFVAILSAFRHCGSVE 510
++LE ++P+ +V + + + C E
Sbjct: 546 QILE--LEPENGAVYVLLCNIYAACNRWE 572
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 125/269 (46%), Gaps = 38/269 (14%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
++ LN+ + + +V+ +K + + N LI +Y+ + + +FD M R+V SW
Sbjct: 233 LKDLNVGKRVHRYVKDLK--IEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWT 290
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
I++ + AR+ FD P +D V++ +M+ GY+ ++ + L LF EMQ+A+
Sbjct: 291 AIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFK-EVLSLFREMQAAN-- 347
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
I+ DEFT+ S L C L + G + A++ K F ++LIDMY C E+A
Sbjct: 348 IKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAI 407
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
R+F NAM P D +SW +I G NG
Sbjct: 408 RIF------------NAM--------------------PH-RDKISWTAVIFGLAINGYG 434
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSAC 269
EE L +F +M + + +E T L AC
Sbjct: 435 EEALDMFSQMLKASITPDEVTCIGVLCAC 463
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 132/295 (44%), Gaps = 34/295 (11%)
Query: 279 KEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQ 338
K+IHS + GLISNP V + I+ CK E
Sbjct: 36 KQIHSQTICTGLISNPIVPAQIIAFCCKHE-----------------------------L 66
Query: 339 GNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVIL 398
G+ME AR FD++ N VW + GY + + + E + + GV+ D L
Sbjct: 67 GDMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLER-GVMPDEYTYPFL 125
Query: 399 LGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDL 458
L A+ G+E+H +I+++G + + + L+ +YS G ++ A +F + D+
Sbjct: 126 LKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDV 185
Query: 459 VLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNS 518
V +NVMI+ Y ++++ LF+EM + P ++T V++LSA + +G K +
Sbjct: 186 VTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVG-KRVHR 244
Query: 519 MTADYKISPETDHYACMIDLYGRANQLEKAI---EFMKSIPTEEDAVILGSFLNV 570
D KI P +ID+Y ++ A+ + MKS I+ F N+
Sbjct: 245 YVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNL 299
>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 200/659 (30%), Positives = 316/659 (47%), Gaps = 101/659 (15%)
Query: 20 GLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLF 79
G + +N LI +Y K L + +FD M +RNV SW
Sbjct: 2 GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWT------------------- 42
Query: 80 DSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLL 139
+++CG+I G ++L LF +M + ++ ++FT ++ L C L
Sbjct: 43 ------------ALMCGHIQ-NGNPLESLLLFSKMGLSG--VKPNDFTFSTNLKACGLLN 87
Query: 140 NVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMV 199
+ GRQ+H VKT D +S+IDMYSKC EA +FE
Sbjct: 88 GLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACMFE--------------- 132
Query: 200 AACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNE 259
+ + +SWN +I+GY G E+ L LF +M E G +E
Sbjct: 133 ------------------VMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDE 174
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLI--SNPFVSSGIVDVYCKCENMNYAESML 317
TF S L AC L +K +IH++++ G + N V+ ++D+Y KC
Sbjct: 175 FTFTSTLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKC---------- 224
Query: 318 LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFD 377
G + ARR F + EK+V+ WTAL GY + N +
Sbjct: 225 ---------------------GKLFMARRVFSHIEEKHVISWTALILGYAQEGNLAESME 263
Query: 378 LLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMY 437
L + + + + D IL ++G A A + GK++HA+ +++ +D + ++++DMY
Sbjct: 264 LFRQ-LRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDISVCNSILDMY 322
Query: 438 SKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFV 497
KCG + AE +F R+++ + VMI Y HG ++AI LF+EM +PD VT++
Sbjct: 323 LKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPDDVTYL 382
Query: 498 AILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPT 557
A+L H G VE G++YF+ + + + I +HYACM+DL GRA +L++A + S+P
Sbjct: 383 AVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAGRLKEAKNLVDSMPL 442
Query: 558 EEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRI 617
E + I + L+ CR++ + EL E LLRL+ N YV ++N+YA G W E RI
Sbjct: 443 EANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSENPVNYVMMSNIYADAGYWKECERI 502
Query: 618 RKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIAGAFY 676
R+ ++ K + AG SWV ++ E+H F GD +HP T I+ +L + E G Y
Sbjct: 503 RELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDTHPLTEKIHEILKEMERRMKEELGYVY 561
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 182/452 (40%), Gaps = 115/452 (25%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K G + + N +I +YSK + E+ +F+ MP RN+ SW
Sbjct: 96 HDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACMFEVMPVRNLISW------------- 142
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
N+M+ GY A G+ AL LF +MQ +DEFT TSTL
Sbjct: 143 ------------------NAMIAGYTVA-GFCEKALVLFQKMQEVGGF--LDEFTFTSTL 181
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVS-------SLIDMYSKCRCYEEACRVFEG 185
C L + G Q+HAF++ GF S +LID+Y KC
Sbjct: 182 KACSDLGAIKEGNQIHAFLI-----TGGFLYSVNTAVAGALIDLYVKC------------ 224
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
G++ MA + F E +SW LI GY Q G+ E ++
Sbjct: 225 --------------------GKLFMARRVF-SHIEEKHVISWTALILGYAQEGNLAESME 263
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
LF ++ E+ ++ + +S + V+ K++H++ +K + V + I+D+Y
Sbjct: 264 LFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDISVCNSILDMYL 323
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL----TEKNVVVWTA 361
KC +N AE + RN S + MI GY G +EA R FD + TE + V + A
Sbjct: 324 KCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPDDVTYLA 383
Query: 362 LF-----SGYV------------------KAQNCEALFDLLSE---------FVTKEGVV 389
+ SG V + ++ + DLL V +
Sbjct: 384 VLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAGRLKEAKNLVDSMPLE 443
Query: 390 TDALILVILLGACALQAALHPGKEIHAYILRM 421
+ I LL AC + L GKE+ +LR+
Sbjct: 444 ANVGIWQTLLSACRVHGDLELGKEVGGILLRL 475
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 69/138 (50%), Gaps = 3/138 (2%)
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
MG D L + L+ MY KCG + A +F ++R++V + ++ + +G+ +++LL
Sbjct: 1 MGFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLL 60
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFN-SMTADYKISPETDHYACMIDLY 539
F +M G+KP+ TF L A +++G + + + + + + +ID+Y
Sbjct: 61 FSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGN--SIIDMY 118
Query: 540 GRANQLEKAIEFMKSIPT 557
+ ++ +A + +P
Sbjct: 119 SKCGRINEAACMFEVMPV 136
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 39/212 (18%), Positives = 98/212 (46%), Gaps = 8/212 (3%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFD---EMPER-NVFSWN 60
NL E++ Q ++ + + + ++ +++ L+++ +++ ++P ++ N
Sbjct: 257 NLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDISVCN 316
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
+I+ +K + +A LF P ++++++ M+ GY G +A++LF EMQ +
Sbjct: 317 SILDMYLKCGMINEAERLFSEMPARNVISWTVMITGY-GKHGLGKEAIRLFDEMQL--DS 373
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSN-DASGFAVSSLIDMYSKCRCYEEA 179
D+ T + L C V G++ + + A + ++D+ + +EA
Sbjct: 374 TEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAGRLKEA 433
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMA 211
+ + E N+ +++AC G++E+
Sbjct: 434 KNLVDSMPLEANVGIWQTLLSACRVHGDLELG 465
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 193/656 (29%), Positives = 332/656 (50%), Gaps = 16/656 (2%)
Query: 28 TNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP--HK 85
T +LIH+Y+ L LF P+ + ++++A + L+ A + FD+ P +
Sbjct: 66 TLRLIHLYTLSPDLATPAALFRSDPDPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARR 125
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR 145
D V +N+M+ + A A A+ +F + + +R D+++ T+ ++ ++ N+
Sbjct: 126 DTVLHNAMMSAFARAS-LAAPAVSVFHALLGSGS-LRPDDYSFTALISAVGQMHNLAAPH 183
Query: 146 --QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYE---EACRVFEGCTEEVNLISKNAMVA 200
QLH ++K+ A ++LI +Y KC E +A +V + ++ +L + MV
Sbjct: 184 CTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDL-TWTTMVV 242
Query: 201 ACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEH 260
R G++ A F D V WN +ISGYVQ+G + +LF RM V +E
Sbjct: 243 GYVRRGDVNAARSVFEEVDGKFDVV-WNAMISGYVQSGMCADAFELFRRMVSEKVPLDEF 301
Query: 261 TFASALSACCGLRNVKCAKEIHSWVLKNGLISNP----FVSSGIVDVYCKCENMNYAESM 316
TF S LSAC K +H +++ P V++ +V +Y K + A+ +
Sbjct: 302 TFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRI 361
Query: 317 LLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALF 376
+++ S ++++ GY G +++A F + KN + W + SGYV E
Sbjct: 362 FDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDAL 421
Query: 377 DLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDM 436
L ++ + E V + AC AL G+++HA++++ G + + L+ M
Sbjct: 422 KLFNQ-MRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTM 480
Query: 437 YSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTF 496
Y+KCG + A ++F D V +N MI+ HGH +A+ LF++M+ +GI PD ++F
Sbjct: 481 YAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISF 540
Query: 497 VAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIP 556
+ IL+A H G V+ G YF SM D+ ISP DHYA +IDL GR+ ++ +A + +K++P
Sbjct: 541 LTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMP 600
Query: 557 TEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGR 616
E I + L+ CR N + E A ++L R+ + Y+ L+N Y+A G W + R
Sbjct: 601 FEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAAR 660
Query: 617 IRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
+RK MR + GCSW+ V +IH+F VGD HP+ +Y L + + ++
Sbjct: 661 VRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLG 716
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 193/366 (52%), Gaps = 18/366 (4%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRES---RKLFDEMPERNVF 57
M +L H +K+G +N LI +Y K + S RK+ DEMP+++
Sbjct: 176 MHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDL 235
Query: 58 SWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSA 117
+W T++ ++ D+ ARS+F+ K V +N+M+ GY+ + G ADA +LF M S
Sbjct: 236 TWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQS-GMCADAFELFRRMVS- 293
Query: 118 DEHIRMDEFTVTSTLNLCVKLLNVGF---GRQLHAFMVKTS----NDASGFAVSSLIDMY 170
E + +DEFT TS L+ C N GF G+ +H +++ +A+ ++L+ +Y
Sbjct: 294 -EKVPLDEFTFTSVLSACA---NAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLY 349
Query: 171 SKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTL 230
SK A R+F+ + +++S N +++ G ++ A++ F P ND +SW +
Sbjct: 350 SKGGKIVIAKRIFDTMNLK-DVVSWNTILSGYIDSGCLDKAVEVFKVMPYKND-LSWMVM 407
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL 290
+SGYV G +E+ LKLF +M V+ ++T+A A++AC L +K +++H+ +++ G
Sbjct: 408 VSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGF 467
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
++ + ++ +Y KC +N A + L+ +S S ++MI G+ EA FD
Sbjct: 468 EASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQ 527
Query: 351 LTEKNV 356
+ + +
Sbjct: 528 MVAEGI 533
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 110/242 (45%), Gaps = 39/242 (16%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
++ N ++ Y L ++ ++F MP +N SW ++S
Sbjct: 371 VSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVS--------------------- 409
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR 145
GY++ G DALKLF +M++ D ++ ++T + C +L + GR
Sbjct: 410 ----------GYVHG-GLSEDALKLFNQMRAED--VKPCDYTYAGAIAACGELGALKHGR 456
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
QLHA +V+ +AS A ++L+ MY+KC +A VF ++ +S NAM++A +
Sbjct: 457 QLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFL-VMPNLDSVSWNAMISALGQH 515
Query: 206 GEMEMALKTFWRQPELN---DAVSWNTLISGYVQNGDAEEGLKLFVRMGEN-GVRWNEHT 261
G AL+ F + D +S+ T+++ G +EG F M + G+ E
Sbjct: 516 GHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDH 575
Query: 262 FA 263
+A
Sbjct: 576 YA 577
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 185/614 (30%), Positives = 311/614 (50%), Gaps = 69/614 (11%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
NT++ + KS+ L A LF P D V+YN+M+ GY + +G + A+ LF+EMQ++
Sbjct: 188 NTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGY-SKDGLDEKAVNLFVEMQNSG- 245
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
++ EFT + L + L ++ G+Q+H+F++KT+ + F ++L+D YSK +A
Sbjct: 246 -LKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDA 304
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
++F+ E+ D VS+N +ISGY +G
Sbjct: 305 RKLFDEMPEQ---------------------------------DGVSYNVIISGYAWDGK 331
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
+ LF + + FA+ LS + + ++IH+ + S V +
Sbjct: 332 HKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNS 391
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
+VD+Y KC G EEA F +LT ++ V W
Sbjct: 392 LVDMYAKC-------------------------------GKFEEAEMIFTNLTHRSAVPW 420
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
TA+ S YV+ E L ++ + + V+ D LL A A A+L GK++H++I+
Sbjct: 421 TAMISAYVQKGFYEEGLQLFNK-MRQASVIADQATFASLLRASASIASLSLGKQLHSFII 479
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
+ G + S L+D+Y+KCG++ A FQ +R++V +N MI+ YA +G E +
Sbjct: 480 KSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLK 539
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
F+EM+ G++PD+V+F+ +LSA H G VE G +FNSMT YK+ P +HYA ++D+
Sbjct: 540 SFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDML 599
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG-NNKARY 598
R+ + +A + M +P + D ++ S LN CR+++N ELA A ++L +E + A Y
Sbjct: 600 CRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPY 659
Query: 599 VQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
V ++N+YAA G W + ++ K MR + SWV ++HE H+F+ D HP+ I
Sbjct: 660 VNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIR 719
Query: 659 SVLAIFTGELYEIA 672
+ + T + E+
Sbjct: 720 KKIDMLTKTMEELG 733
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 141/558 (25%), Positives = 253/558 (45%), Gaps = 71/558 (12%)
Query: 1 MRSLNLKEALICHVQA--IKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFS 58
++S L+ ++ ++ A +K G T +N + + K+ L ++R+LF++MP +N S
Sbjct: 26 LQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVS 85
Query: 59 WNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSAD 118
N +IS +KS +L +AR LFD + VT+ ++ GY ++ +A +LF++MQ
Sbjct: 86 TNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFK-EAFELFVQMQRCG 144
Query: 119 EHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEE 178
D T + L+ C Q+ ++K D+ ++L+D Y K +
Sbjct: 145 --TEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDL 202
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
AC++F+ E++ +S NAM I+GY ++G
Sbjct: 203 ACQLFKEMP-EIDSVSYNAM--------------------------------ITGYSKDG 229
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
E+ + LFV M +G++ E TFA+ L A GL ++ ++IHS+V+K + N FVS+
Sbjct: 230 LDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSN 289
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
++D Y K + S+I +AR+ FD + E++ V
Sbjct: 290 ALLDFYSKHD---------------------SVI----------DARKLFDEMPEQDGVS 318
Query: 359 WTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
+ + SGY + FDL E + +L + G++IHA
Sbjct: 319 YNVIISGYAWDGKHKYAFDLFRE-LQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQT 377
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
+ + + ++LVDMY+KCG AE+IF N R V + MI+ Y G E+ +
Sbjct: 378 IVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGL 437
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
LF +M + + D TF ++L A S+ +G K +S + ++D+
Sbjct: 438 QLFNKMRQASVIADQATFASLLRASASIASLSLG-KQLHSFIIKSGFMSNVFSGSALLDV 496
Query: 539 YGRANQLEKAIEFMKSIP 556
Y + ++ A++ + +P
Sbjct: 497 YAKCGSIKDAVQTFQEMP 514
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 127/479 (26%), Positives = 207/479 (43%), Gaps = 86/479 (17%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYS-KHNLLRESRKLFDEMPERNVFSW 59
M++ LK + A + L I Q IH + K N + NVF
Sbjct: 241 MQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVW------------NVFVS 288
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N ++ K + AR LFD P +D V+YN ++ GY +G A LF E+Q
Sbjct: 289 NALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYA-WDGKHKYAFDLFRELQFT-- 345
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
+F + L++ L+ GRQ+HA + T+ D+ +SL+DMY+KC +EEA
Sbjct: 346 AFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEA 405
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
+F T AV W +IS YVQ G
Sbjct: 406 EMIFTNLTHR---------------------------------SAVPWTAMISAYVQKGF 432
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
EEGL+LF +M + V ++ TFAS L A + ++ K++HS+++K+G +SN F S
Sbjct: 433 YEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSA 492
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
++DVY KC G++++A + F + ++N+V W
Sbjct: 493 LLDVYAKC-------------------------------GSIKDAVQTFQEMPDRNIVSW 521
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
A+ S Y + EA E V G+ D++ + +L AC+ + G H +
Sbjct: 522 NAMISAYAQNGEAEATLKSFKEMVL-SGLQPDSVSFLGVLSACSHSGLVEEGL-WHFNSM 579
Query: 420 RMGVQMDKKL--ISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLY-NVMIACYAHHGHE 474
++D + +++VDM + G AE + I+ D +++ +V+ AC H E
Sbjct: 580 TQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQE 638
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 139/307 (45%), Gaps = 7/307 (2%)
Query: 258 NEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESML 317
N TF + S + I + ++K G + S+ V + K ++ A +
Sbjct: 16 NVSTFLKSSSLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLF 75
Query: 318 LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFD 377
+N+ S + MI GY GN+ EAR+ FD + E+ V WT L GY + + F+
Sbjct: 76 EKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFE 135
Query: 378 LLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI--STLVD 435
L + + + G D + V LL C + ++ I+++G D +LI +TLVD
Sbjct: 136 LFVQ-MQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGY--DSRLIVGNTLVD 192
Query: 436 MYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVT 495
Y K + A +F+ E D V YN MI Y+ G +EKA+ LF EM G+KP T
Sbjct: 193 SYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFT 252
Query: 496 FVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSI 555
F A+L A + +G++ +S ++D Y + + + A + +
Sbjct: 253 FAAVLCANIGLDDIVLGQQ-IHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEM 311
Query: 556 PTEEDAV 562
P E+D V
Sbjct: 312 P-EQDGV 317
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 202/709 (28%), Positives = 344/709 (48%), Gaps = 73/709 (10%)
Query: 1 MRSLNLKEALICHVQA--IKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFS 58
++S L+ ++ ++ A +K G T +N + + K+ L ++R+LF++MP +N S
Sbjct: 21 LQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVS 80
Query: 59 WNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSAD 118
N +IS +KS +L +AR LFD + VT+ ++ GY ++ +A +LF++MQ
Sbjct: 81 TNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFK-EAFELFVQMQRCG 139
Query: 119 EHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEE 178
D T + L+ C Q+ ++K D+ ++L+D Y K +
Sbjct: 140 --TEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDL 197
Query: 179 ACRVFE------------------GCTEEV----------------NLISKNAMVAACCR 204
AC++F+ G + V N+ NA++ +
Sbjct: 198 ACQLFKEMPEIDSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSK 257
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFAS 264
+ A K F PE D VS+N +ISGY +G + LF + + FA+
Sbjct: 258 HDSVIDARKLFDEMPE-QDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFAT 316
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
LS + + ++IH+ + S V + +VD+Y KC
Sbjct: 317 MLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKC----------------- 359
Query: 325 SFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVT 384
G EEA F +LT ++ V WTA+ S YV+ E L ++ +
Sbjct: 360 --------------GKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNK-MR 404
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
+ V+ D LL A A A+L GK++H++I++ G + S L+D+Y+KCG++
Sbjct: 405 QASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIK 464
Query: 445 YAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR 504
A FQ +R++V +N MI+ YA +G E + F+EM+ G++PD+V+F+ +LSA
Sbjct: 465 DAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACS 524
Query: 505 HCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVIL 564
H G VE G +FNSMT YK+ P +HYA ++D+ R+ + +A + M +P + D ++
Sbjct: 525 HSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMW 584
Query: 565 GSFLNVCRLNRNAELAGEAEEKLLRLEG-NNKARYVQLANVYAAEGNWAEMGRIRKQMRG 623
S LN CR+++N ELA A ++L +E + A YV ++N+YAA G W + ++ K MR
Sbjct: 585 SSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRD 644
Query: 624 MKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
+ SWV ++HE H+F+ D HP+ I + + T + E+
Sbjct: 645 RGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELG 693
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/465 (24%), Positives = 199/465 (42%), Gaps = 39/465 (8%)
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
++TS +L L + + A +VKT D + + + K +A ++FE
Sbjct: 14 SLTSLASLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKM 73
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
+ N +S N M++ + G + A K F E AV+W LI GY Q +E +L
Sbjct: 74 PHK-NTVSTNMMISGYVKSGNLGEARKLFDGMVE-RTAVTWTILIGGYSQLNQFKEAFEL 131
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
FV+M G + TF + LS C G ++ + ++K G S V + +VD YCK
Sbjct: 132 FVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCK 191
Query: 307 --------------------------CENMNYAESML-------LLKG--VRNSFSISSM 331
C N+ + +L ++K V N F +++
Sbjct: 192 SNRLDLACQLFKEMPEIDSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNAL 251
Query: 332 IVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTD 391
+ YS ++ +AR+ FD + E++ V + + SGY + FDL E +
Sbjct: 252 LDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRE-LQFTAFDRK 310
Query: 392 ALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQ 451
+L + G++IHA + + + ++LVDMY+KCG AE+IF
Sbjct: 311 QFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFT 370
Query: 452 NFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEM 511
N R V + MI+ Y G E+ + LF +M + + D TF ++L A S+ +
Sbjct: 371 NLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSL 430
Query: 512 GEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIP 556
G K +S + ++D+Y + ++ A++ + +P
Sbjct: 431 G-KQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMP 474
>gi|356522522|ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Glycine max]
Length = 911
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 207/703 (29%), Positives = 348/703 (49%), Gaps = 80/703 (11%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K G + + LI++Y K + + ++FDE P + F WNTI+ A ++S
Sbjct: 154 HACLLKRGFQVDVHLSCALINLYEKCLGIDRANQVFDETPLQEDFLWNTIVMANLRS--- 210
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
E +E DAL+L MQSA + + T+ L
Sbjct: 211 ----------------------------ERWE-DALELSRRMQSASA--KATDGTIVKLL 239
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C KL + G+Q+H ++++ ++ +S++ MYS+ E A VF+ TE+ NL
Sbjct: 240 QACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARAVFDS-TEDHNL 298
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELN----DAVSWNTLISGYVQNGDAEEGLKLFV 248
S N+++++ G + A F R+ E + D ++WN+L+SG++ G E L
Sbjct: 299 ASWNSIISSYAVNGCLNGAWDLF-REMESSSIKPDIITWNSLLSGHLLQGSYENVLTNIR 357
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
+ G + + + SAL A L KEIH +++++ L + +V + +VD+Y K +
Sbjct: 358 SLQSAGFKPDSCSITSALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLVDMYIKND 417
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK-------------- 354
+ AE + +N + +S+I GY+ +G + A + + E+
Sbjct: 418 CLEKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIKADLVTWNSLVS 477
Query: 355 -------------------------NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVV 389
NVV WTA+ SG + +N S+ + +E V
Sbjct: 478 GYSMSGCSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYTDALQFFSQ-MQEENVK 536
Query: 390 TDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEII 449
++ + LL ACA + L G+EIH + ++ G D + + L+DMYSK G + A +
Sbjct: 537 PNSTTISTLLRACAGPSLLKKGEEIHCFSMKHGFVDDIYIATALIDMYSKGGKLKVAHEV 596
Query: 450 FQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSV 509
F+N E+ L +N M+ YA +GH E+ LF+ M + GI+PDA+TF A+LS ++ G V
Sbjct: 597 FRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDNMCKTGIRPDAITFTALLSGCKNSGLV 656
Query: 510 EMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLN 569
G KYF+SM DY I+P +HY+CM+DL G+A L++A++F+ ++P + DA I G+ L
Sbjct: 657 MDGWKYFDSMKTDYSINPTIEHYSCMVDLLGKAGFLDEALDFIHAMPQKADASIWGAVLA 716
Query: 570 VCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRF 629
CRL+++ ++A A L RLE N A YV + N+Y+ W ++ R+++ M M
Sbjct: 717 ACRLHKDIKIAEIAARNLFRLEPYNSANYVLMMNIYSTFERWGDVERLKESMTAMGVKIP 776
Query: 630 AGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
SW+ V IH+F+ SHP+ IY L E+ ++
Sbjct: 777 NVWSWIQVRQTIHVFSTEGKSHPEEGEIYFDLYQLISEIKKLG 819
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 146/569 (25%), Positives = 247/569 (43%), Gaps = 91/569 (15%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
+R+LN E H I+ G T N ++ +YS++N L +R +FD + N+ SWN
Sbjct: 245 LRALN--EGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARAVFDSTEDHNLASWN 302
Query: 61 TIISACIKSHDLKQARSLF----DSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQS 116
+IIS+ + L A LF SS D++T+NS+L G++ YE + L +QS
Sbjct: 303 SIISSYAVNGCLNGAWDLFREMESSSIKPDIITWNSLLSGHLLQGSYE-NVLTNIRSLQS 361
Query: 117 ADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCY 176
A + D ++TS L ++L G+++H +++++ + + +SL+DMY K C
Sbjct: 362 AG--FKPDSCSITSALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLVDMYIKNDCL 419
Query: 177 EEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN---DAVSWNTLISG 233
E+A VF T+ N+ + N++++ +G + A K + E D V+WN+L+SG
Sbjct: 420 EKAEVVFHH-TKNKNICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIKADLVTWNSLVSG 478
Query: 234 YVQNGDAEEGL-----------------------------------KLFVRMGENGVRWN 258
Y +G +EE L + F +M E V+ N
Sbjct: 479 YSMSGCSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYTDALQFFSQMQEENVKPN 538
Query: 259 EHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLL 318
T ++ L AC G +K +EIH + +K+G + + ++++ ++D+Y K
Sbjct: 539 STTISTLLRACAGPSLLKKGEEIHCFSMKHGFVDDIYIATALIDMYSK------------ 586
Query: 319 LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDL 378
G ++ A F ++ EK + W + GY + E +F L
Sbjct: 587 -------------------GGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTL 627
Query: 379 LSEFVTKEGVVTDALILVILLGACALQAALHPG-KEIHAYILRMGVQMDKKLISTLVDMY 437
+ K G+ DA+ LL C + G K + + + S +VD+
Sbjct: 628 FDN-MCKTGIRPDAITFTALLSGCKNSGLVMDGWKYFDSMKTDYSINPTIEHYSCMVDLL 686
Query: 438 SKCGNMTYA-EIIFQNFIERDLVLYN-VMIACYAHHG---HEEKAILLFEEMLEKGIKPD 492
K G + A + I + D ++ V+ AC H E A LF LE +
Sbjct: 687 GKAGFLDEALDFIHAMPQKADASIWGAVLAACRLHKDIKIAEIAARNLFR--LEPYNSAN 744
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTA 521
V + I S F G V E+ SMTA
Sbjct: 745 YVLMMNIYSTFERWGDV---ERLKESMTA 770
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 127/547 (23%), Positives = 247/547 (45%), Gaps = 56/547 (10%)
Query: 39 NLLRESRKLFDEMPER-NVFSWN-TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCG 96
N +RE +MP++ N+ + + +++ ++ D + A +F ++ + +NS L
Sbjct: 45 NSVRELHAQMIKMPKKGNLVTMDGSMMRNYLEFGDFESATKVFFVGFARNYLLWNSFLEE 104
Query: 97 YINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSN 156
+ + G + L++F E+ D+ ++ D +T L +C+ L+ + G ++HA ++K
Sbjct: 105 FASFGGDSHEILEVFKELH--DKGVKFDSKALTVVLKICLALMELWLGMEVHACLLKRGF 162
Query: 157 DASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFW 216
+LI++Y KC + A +VF+
Sbjct: 163 QVDVHLSCALINLYEKCLGIDRANQVFD-------------------------------- 190
Query: 217 RQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVK 276
+ L + WNT++ +++ E+ L+L RM + + T L AC LR +
Sbjct: 191 -ETPLQEDFLWNTIVMANLRSERWEDALELSRRMQSASAKATDGTIVKLLQACGKLRALN 249
Query: 277 CAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYS 336
K+IH +V++ G +SN + + IV +Y + + A ++ N S +S+I Y+
Sbjct: 250 EGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARAVFDSTEDHNLASWNSIISSYA 309
Query: 337 LQGNMEEA----RRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSE-----FVTKEG 387
+ G + A R S + +++ W +L SG++ + E + + F
Sbjct: 310 VNGCLNGAWDLFREMESSSIKPDIITWNSLLSGHLLQGSYENVLTNIRSLQSAGFKPDSC 369
Query: 388 VVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAE 447
+T AL VI LG L GKEIH YI+R ++ D + ++LVDMY K + AE
Sbjct: 370 SITSALQAVIELGYFNL------GKEIHGYIMRSKLEYDVYVCTSLVDMYIKNDCLEKAE 423
Query: 448 IIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCG 507
++F + +++ +N +I+ Y + G + A L +M E+GIK D VT+ +++S + G
Sbjct: 424 VVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIKADLVTWNSLVSGYSMSG 483
Query: 508 SVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE---EDAVIL 564
E N + + ++P + MI + A++F + E ++ +
Sbjct: 484 CSEEALAVINRIKS-LGLTPNVVSWTAMISGCCQNENYTDALQFFSQMQEENVKPNSTTI 542
Query: 565 GSFLNVC 571
+ L C
Sbjct: 543 STLLRAC 549
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 186/610 (30%), Positives = 309/610 (50%), Gaps = 70/610 (11%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
E+N F +++IS +K + +A+ +FD P+KD+V +NS++ GY+ A ++ A +LF
Sbjct: 162 EKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDV-AFQLFF 220
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
EM + I+ T+TS + C + N+ G+ +H +++ ++S +DMYSK
Sbjct: 221 EMHGSG--IKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSK 278
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
G++E A F++ P N VSWN +IS
Sbjct: 279 M--------------------------------GDIESARWVFYKMPTRN-LVSWNAMIS 305
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
G V+NG E LF R+ + ++ T S L C ++ K +H +++ S
Sbjct: 306 GCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIRS-FES 364
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
N +S+ IVD+Y KC G++++A F+ +
Sbjct: 365 NLILSTAIVDLYSKC-------------------------------GSLKQATFVFNRMK 393
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
++NV+ WTA+ G + + E L ++ + +EG+ +++ V L+ +CA +L G+
Sbjct: 394 DRNVITWTAMLVGLAQNGHAEDALRLFAQ-MQEEGIAANSVTFVSLVHSCAHLGSLKRGR 452
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQN-FIERDLVLYNVMIACYAHH 471
IH ++ R+G D ++ LVDMY+KCG + AE IF + I +D+VL+N MI Y H
Sbjct: 453 SIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMH 512
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH 531
GH +A+ ++ +M+E+G+KP+ TF+++LSA H VE G FNSM D+ I P H
Sbjct: 513 GHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKH 572
Query: 532 YACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLE 591
YAC++DL RA + E+A ++ +P + +L + L+ CR ++N L + +KLL L+
Sbjct: 573 YACLVDLLSRAGRFEEAQALIEKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLALD 632
Query: 592 GNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSH 651
N Y+ L+N+YA W ++ IR MR + G S V + +H F GD SH
Sbjct: 633 AMNPGIYIMLSNIYAEARRWDKVDYIRGLMRNRGLKKTPGYSLVETGNWVHTFFAGDNSH 692
Query: 652 PKTNAIYSVL 661
P IY L
Sbjct: 693 PNWEEIYHFL 702
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 102/469 (21%), Positives = 189/469 (40%), Gaps = 102/469 (21%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
NLK H + GL + + +YSK + +R +F +MP RN+ SWN +IS
Sbjct: 246 NLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMIS 305
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
C+++ + ++ LF H+ + + G D
Sbjct: 306 GCVRNGLVGESFDLF----HR-----------LVRSSG-------------------GFD 331
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
T+ S L C + ++ G+ LH ++ S +++ ++++D+YSKC ++A VF
Sbjct: 332 LTTIVSLLQGCSQTASLATGKILHGCAIR-SFESNLILSTAIVDLYSKCGSLKQATFVFN 390
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
+ N+I+ AM+ + G AE+ L
Sbjct: 391 RMKDR-NVITWTAMLVGLAQNGH--------------------------------AEDAL 417
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
+LF +M E G+ N TF S + +C L ++K + IH + + G + + +VD+Y
Sbjct: 418 RLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMY 477
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
KC +N AE + FS S+ K+VV+W ++ +
Sbjct: 478 AKCGKINLAERI---------FSHGSI---------------------SKDVVLWNSMIT 507
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR-MGV 423
GY + + + + +EG+ + + LL AC+ + G + + R +
Sbjct: 508 GYGMHGHGYQAVGIYHKMI-EEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNI 566
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQN--FIERDLVLYNVMIACYAH 470
+ +K + LVD+ S+ G A+ + + F VL ++ C H
Sbjct: 567 RPIEKHYACLVDLLSRAGRFEEAQALIEKMPFQPGTAVLEALLSGCRTH 615
>gi|449530628|ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 186/566 (32%), Positives = 304/566 (53%), Gaps = 7/566 (1%)
Query: 98 INAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTS-N 156
++++G +AL + A IR+ L LC K G+ +H + T
Sbjct: 37 LSSQGRLPEALSYLDRL--AQRGIRLPTGIFVDLLRLCAKAKYFKGGKCVHLHLKHTGFK 94
Query: 157 DASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFW 216
+ + LI MY +C EA +VF+ + NL S N M+A + G++ A K F
Sbjct: 95 RPTTIVANHLIGMYFECGRDVEARKVFDKMSVR-NLYSWNHMLAGYAKLGDVNNARKLFD 153
Query: 217 RQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVK 276
R E D VSWNT++ Y + G E + L+ + +N +FA L C L+ ++
Sbjct: 154 RMME-KDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQ 212
Query: 277 CAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYS 336
AK++H VL G +SN +SS IVD Y KC M A ++ V++ + ++++ GY+
Sbjct: 213 LAKQVHGQVLVAGFLSNLVLSSSIVDAYSKCGEMRCARTLFDEMLVKDIHAWTTIVSGYA 272
Query: 337 LQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILV 396
G+M A F + EKN V W+AL SGY + D ++ + K G+ +
Sbjct: 273 KWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMM-KFGINPEQYTFS 331
Query: 397 ILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFI-E 455
L ACA AAL GK++H Y++R + + ++S+L+DMYSKCG + + +F +
Sbjct: 332 SCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNK 391
Query: 456 RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKY 515
+D+V++N MI+ A +GH EKA+ +F +M+E G+KPD +TF+ ILSA H G V+ G ++
Sbjct: 392 QDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQEGLRF 451
Query: 516 FNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNR 575
F +MT D+ + P+ +HYAC+IDL GRA + + ++++ + D + + L VCR++
Sbjct: 452 FKAMTYDHGVFPDQEHYACLIDLLGRAGCFVELVNELENMSCKPDDRVWSALLGVCRIHN 511
Query: 576 NAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWV 635
N EL + E+++ L+ + A YV LA++YA G W + ++R+ M + G SW+
Sbjct: 512 NIELGRKVAERVIELKPQSSAAYVSLASLYAFLGKWESVEKVRELMDEKFIRKERGISWI 571
Query: 636 YVEHEIHIFTVGDVSHPKTNAIYSVL 661
V ++ H F D HP IY +L
Sbjct: 572 DVGNKTHSFIASDRLHPLKEEIYLLL 597
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 137/534 (25%), Positives = 245/534 (45%), Gaps = 78/534 (14%)
Query: 24 TTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP 83
TTI N LI +Y + E+RK+FD+M RN++SWN +++ K D+ AR LFD
Sbjct: 97 TTIVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMM 156
Query: 84 HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGF 143
KD+V++N+++ Y +G +A+ L+ + + D + + F+ L LCVKL +
Sbjct: 157 EKDVVSWNTIVLAYAK-QGCFNEAIGLYRDFRRLD--MGFNAFSFAGVLILCVKLKELQL 213
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
+Q+H ++ ++ SS++D YSKC A +F+ + ++ + +V+
Sbjct: 214 AKQVHGQVLVAGFLSNLVLSSSIVDAYSKCGEMRCARTLFDEMLVK-DIHAWTTIVSGYA 272
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
+ G+M A + F + PE N VSW+ LISGY +N E L F +M + G+ ++TF+
Sbjct: 273 KWGDMNSASELFHQMPEKN-PVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFS 331
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
S L AC + +K K++H ++++ N V S ++D+Y KC +
Sbjct: 332 SCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLE------------ 379
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV 383
+S V + L GN +++VVVW + S + + E + ++ V
Sbjct: 380 -----ASCCV-FHLMGN------------KQDVVVWNTMISALAQNGHGEKAMQMFNDMV 421
Query: 384 TKEGVVTDALILVILLGACALQAALHPG-KEIHAYILRMGVQMDKKLISTLVDMYSKCGN 442
+ G+ D + +++L AC+ + G + A GV D++ + L+D+ + G
Sbjct: 422 -ESGLKPDRITFIVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQEHYACLIDLLGRAG- 479
Query: 443 MTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
F+E L E+ KPD + A+L
Sbjct: 480 ---------CFVE------------------------LVNELENMSCKPDDRVWSALLGV 506
Query: 503 FRHCGSVEMGEKYFNSMTADYKISPETD-HYACMIDLY---GRANQLEKAIEFM 552
R ++E+G K + ++ P++ Y + LY G+ +EK E M
Sbjct: 507 CRIHNNIELGRKVAERVI---ELKPQSSAAYVSLASLYAFLGKWESVEKVRELM 557
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 141/263 (53%), Gaps = 9/263 (3%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L+ A H Q + AG + ++ ++ YSK +R +R LFDEM +++ +W TI+S
Sbjct: 211 LQLAKQVHGQVLVAGFLSNLVLSSSIVDAYSKCGEMRCARTLFDEMLVKDIHAWTTIVSG 270
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYI-NAEGYEADALKLFIEMQSADEHIRMD 124
K D+ A LF P K+ V++++++ GY N+ G+E AL F +M I +
Sbjct: 271 YAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHE--ALDYFTKMMKFG--INPE 326
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
++T +S L C + + G+Q+H ++++T + VSSLIDMYSKC E +C VF
Sbjct: 327 QYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFH 386
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN---DAVSWNTLISGYVQNGDAE 241
+ +++ N M++A + G E A++ F E D +++ ++S +G +
Sbjct: 387 LMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQ 446
Query: 242 EGLKLFVRMG-ENGVRWNEHTFA 263
EGL+ F M ++GV ++ +A
Sbjct: 447 EGLRFFKAMTYDHGVFPDQEHYA 469
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 190/594 (31%), Positives = 306/594 (51%), Gaps = 74/594 (12%)
Query: 78 LFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVK 137
+ D + ++ +N+M+ G + + ++ ++++++ M+ E + D FT L C +
Sbjct: 64 ILDQTKEPNIFLFNTMIRGLVLNDCFQ-ESIEIYHSMRK--EGLSPDSFTFPFVLKACAR 120
Query: 138 LLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNA 197
+L+ G ++H+ +VK +A F SLI++Y+KC
Sbjct: 121 VLDSELGVKMHSLVVKAGCEADAFVKISLINLYTKC------------------------ 156
Query: 198 MVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRW 257
G ++ A K F P+ N A SW ISGYV G E + +F R+ E G+R
Sbjct: 157 --------GFIDNAFKVFDDIPDKNFA-SWTATISGYVGVGKCREAIDMFRRLLEMGLRP 207
Query: 258 NEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESML 317
+ + LSAC +++ + I ++ +NG++ N FV++ +VD Y KC
Sbjct: 208 DSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKC---------- 257
Query: 318 LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFD 377
GNME AR FD + EKN+V W+++ GY + D
Sbjct: 258 ---------------------GNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALD 296
Query: 378 LLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST-LVDM 436
L + + EG+ D +V +L +CA AL G + + ++ +D ++ T L+DM
Sbjct: 297 LFFKMLN-EGLKPDCYAMVGVLCSCARLGALELG-DWASNLINGNEFLDNSVLGTALIDM 354
Query: 437 YSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTF 496
Y+KCG M A +F+ ++D V++N I+ A GH + A+ LF +M + GIKPD TF
Sbjct: 355 YAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTF 414
Query: 497 VAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIP 556
V +L A H G VE G +YFNSM + ++PE +HY CM+DL GRA L++A + +KS+P
Sbjct: 415 VGLLCACTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMP 474
Query: 557 TEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGR 616
E +A++ G+ L CRL+R+ +L +KL+ LE + YV L+N+YAA W E +
Sbjct: 475 MEANAIVWGALLGGCRLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAK 534
Query: 617 IRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
IR M RG+K + G SW+ V+ +H F VGD SHP + IY+ L +L
Sbjct: 535 IRSIMSERGVK--KIPGYSWIEVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDL 586
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/412 (20%), Positives = 155/412 (37%), Gaps = 99/412 (24%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R L+ + + H +KAG LI++Y+K + + K+FD++P++N SW
Sbjct: 120 RVLDSELGVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTA 179
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
IS + ++A +F + +EM +
Sbjct: 180 TISGYVGVGKCREAIDMF-----------------------------RRLLEMG-----L 205
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
R D F++ L+ C + ++ G + ++ + + F ++L+D Y KC E A
Sbjct: 206 RPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARS 265
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
VF+G E+ + VSW+++I GY NG +
Sbjct: 266 VFDGMLEK---------------------------------NIVSWSSMIQGYASNGLPK 292
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E L LF +M G++ + + L +C L ++ + + N + N + + ++
Sbjct: 293 EALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALI 352
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D+Y KC G M+ A F + +K+ VVW A
Sbjct: 353 DMYAKC-------------------------------GRMDRAWEVFRGMRKKDRVVWNA 381
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
SG + + + L + + K G+ D V LL AC + G+
Sbjct: 382 AISGLAMSGHVKDALGLFGQ-MEKSGIKPDRNTFVGLLCACTHAGLVEEGRR 432
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 124/278 (44%), Gaps = 33/278 (11%)
Query: 271 GLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISS 330
G +K K IH+ +L+ GL + + LL K +R SF+
Sbjct: 19 GFSCLKHLKHIHAALLRLGLDEDTY---------------------LLNKVLRFSFNF-- 55
Query: 331 MIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVT 390
GN + R D E N+ ++ + G V +C + + KEG+
Sbjct: 56 --------GNTNYSFRILDQTKEPNIFLFNTMIRGLV-LNDCFQESIEIYHSMRKEGLSP 106
Query: 391 DALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIF 450
D+ +L ACA G ++H+ +++ G + D + +L+++Y+KCG + A +F
Sbjct: 107 DSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVF 166
Query: 451 QNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVE 510
+ +++ + I+ Y G +AI +F +LE G++PD+ + V +LSA + G +
Sbjct: 167 DDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLR 226
Query: 511 MGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
GE + + + + ++D YG+ +E+A
Sbjct: 227 SGE-WIDEYITENGMVRNVFVATALVDFYGKCGNMERA 263
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 5/149 (3%)
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
K IHA +LR+G+ D L++ ++ GN Y+ I E ++ L+N MI +
Sbjct: 27 KHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLN 86
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH 531
+++I ++ M ++G+ PD+ TF +L A E+G K + + K E D
Sbjct: 87 DCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVV---KAGCEADA 143
Query: 532 YA--CMIDLYGRANQLEKAIEFMKSIPTE 558
+ +I+LY + ++ A + IP +
Sbjct: 144 FVKISLINLYTKCGFIDNAFKVFDDIPDK 172
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 198/672 (29%), Positives = 327/672 (48%), Gaps = 83/672 (12%)
Query: 20 GLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPER---NVFSWNTIISACIKSHDLKQAR 76
G N L+ +YS+ L ++ +FDE+ + +V SWN+I++A +K + + A
Sbjct: 179 GFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTAL 238
Query: 77 SLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCV 136
LF + + + ++ +E R D ++ + L C
Sbjct: 239 ELFSE--------------------------MSMIVHEKATNE--RSDIISIVNILPACA 270
Query: 137 KLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKN 196
L + +++H++ ++ A F ++LID Y+KC +A +VF E +++S N
Sbjct: 271 SLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFN-VMEFKDVVSWN 329
Query: 197 AMVAACCREGEMEMALKTFWRQPELN---DAVSWNTLISGYVQNGDAEEGLKLFVRMGEN 253
AMV + G A + F + N D ++W+ +I+GY Q G ++E L F +M +
Sbjct: 330 AMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILD 389
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS------------NPFVSSGIV 301
G N T S LSAC L + EIH++ LK L+S + V + ++
Sbjct: 390 GSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALI 449
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT--EKNVVVW 359
D+Y KC + A S+ FDS+ E+NVV W
Sbjct: 450 DMYSKCRSFKAARSI-------------------------------FDSIPRRERNVVTW 478
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKE-GVVTDALILVILLGACALQAALHPGKEIHAYI 418
T + GY + + + SE ++K V +A + +L ACA AAL GK+IHAY+
Sbjct: 479 TVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYV 538
Query: 419 LRMGVQMDKK--LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
R + + L+DMYSKCG++ A +F + +R+ V + M++ Y HG ++
Sbjct: 539 TRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKE 598
Query: 477 AILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMI 536
A+ +F++M + G PD ++F+ +L A H G V+ G YF+ M DY + +HYAC+I
Sbjct: 599 ALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVI 658
Query: 537 DLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKA 596
DL R +L+KA + ++ +P E AVI + L+ CR++ N ELA A KL+ ++ N
Sbjct: 659 DLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKAENDG 718
Query: 597 RYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNA 656
Y ++N+YA W ++ RIR+ M+ + GCSWV + F VGD SHP +
Sbjct: 719 SYTLISNIYANARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPE 778
Query: 657 IYSVLAIFTGEL 668
IYS+L G +
Sbjct: 779 IYSLLERLIGRI 790
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 139/515 (26%), Positives = 244/515 (47%), Gaps = 61/515 (11%)
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
K A S+ + V +N ++ +I EG+ A+ + M A + D FT+ L
Sbjct: 100 KDALSVLERVTPSPAVWWNLLVREHIK-EGHLDRAIGVSCRMLRAGT--KPDHFTLPYAL 156
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C +L + GR LH + +++ F ++L+ MYS+C E+A VF+ T
Sbjct: 157 KACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEIT----- 211
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG- 251
R+G ++D +SWN++++ +V+ + L+LF M
Sbjct: 212 -----------RKG--------------IDDVISWNSIVAAHVKGSNPRTALELFSEMSM 246
Query: 252 -----ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
R + + + L AC L+ + KEIHS+ ++NG ++ FV + ++D Y K
Sbjct: 247 IVHEKATNERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAK 306
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKN----VVVWTAL 362
C +MN A + + ++ S ++M+ GY+ GN A F+++ ++N V+ W+A+
Sbjct: 307 CGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAV 366
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR-- 420
+GY + + D + + +G +++ ++ LL ACA AL G EIHAY L+
Sbjct: 367 IAGYAQRGCSQEALDAFQQMIL-DGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKC 425
Query: 421 ----------MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFI--ERDLVLYNVMIACY 468
G D + + L+DMYSKC + A IF + ER++V + VMI Y
Sbjct: 426 LLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGY 485
Query: 469 AHHGHEEKAILLFEEMLEK--GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKIS 526
A +G A+ +F EM+ K + P+A T IL A H ++ MG++ +T ++
Sbjct: 486 AQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYE 545
Query: 527 PETDHYA-CMIDLYGRANQLEKAIEFMKSIPTEED 560
P A C+ID+Y + ++ A S+P +
Sbjct: 546 PSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNE 580
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 135/558 (24%), Positives = 234/558 (41%), Gaps = 133/558 (23%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H AI+ G N LI Y+K + ++ K+F+ M ++V SWN +++ +S +
Sbjct: 282 HSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNF 341
Query: 73 KQARSLFDSSPHK----DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
A LF++ + D++T+++++ GY G +AL F +M + + T+
Sbjct: 342 GAAFELFENMRKENIPLDVITWSAVIAGYAQ-RGCSQEALDAFQQM--ILDGSEPNSVTI 398
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVK------------TSNDASGFAVSSLIDMYSKCRCY 176
S L+ C L + G ++HA+ +K + ++LIDMYSKCR +
Sbjct: 399 ISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSF 458
Query: 177 EEACRVFEGCT-EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYV 235
+ A +F+ E N+++ M I GY
Sbjct: 459 KAARSIFDSIPRRERNVVTWTVM--------------------------------IGGYA 486
Query: 236 QNGDAEEGLKLFVRM--GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI-- 291
Q GD+ + LK+F M V N +T + L AC L ++ K+IH++V ++
Sbjct: 487 QYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEP 546
Query: 292 SNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL 351
S FV++ ++D+Y KC +++ A ++ RN S +SM+ GY + G +EA FD +
Sbjct: 547 SVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKM 606
Query: 352 TEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG 411
K G V D + ++LL AC+ H G
Sbjct: 607 --------------------------------QKAGFVPDDISFLVLLYACS-----HSG 629
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL----YNVMIAC 467
+VD + Y +I+ +++ D+V Y +I
Sbjct: 630 ---------------------MVDQ-----GLNYFDIMRRDY---DVVASAEHYACVIDL 660
Query: 468 YAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISP 527
A G +KA +EM ++P AV +VA+LSA R +VE+ E N + +
Sbjct: 661 LARCGRLDKAWKTIQEM---PMEPSAVIWVALLSACRVHSNVELAEYALNKLV---NMKA 714
Query: 528 ETD-HYACMIDLYGRANQ 544
E D Y + ++Y A +
Sbjct: 715 ENDGSYTLISNIYANARR 732
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 123/300 (41%), Gaps = 29/300 (9%)
Query: 262 FASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKG 321
FAS L C R+V ++IH ++ GL+S P + + +Y L G
Sbjct: 34 FASLLKEC---RSVNTVRQIHQKIIACGLLSYPSSLLSV--PLAPLPSHSYVSPKSLGTG 88
Query: 322 VRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSE 381
V + Y G ++A + +T V W L ++K + + +
Sbjct: 89 V---------VASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCR 139
Query: 382 FVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
+ + G D L L AC + G+ +H I G + + + + LV MYS+CG
Sbjct: 140 ML-RAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCG 198
Query: 442 NMTYAEIIFQNFIER---DLVLYNVMIACYAHHGHEEKAILLFEEML----EKGI--KPD 492
++ A ++F + D++ +N ++A + + A+ LF EM EK + D
Sbjct: 199 SLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSD 258
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC--MIDLYGRANQLEKAIE 550
++ V IL A C S++ + + + D + C +ID Y + + A++
Sbjct: 259 IISIVNILPA---CASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVK 315
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 195/656 (29%), Positives = 335/656 (51%), Gaps = 17/656 (2%)
Query: 28 TNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP--HK 85
T +L+H+Y+ L LF P + +++SA + L+ + + FDS P +
Sbjct: 63 TLRLLHLYTLSPDLATPAVLFRADP--GPVAATSLVSAYAVAGRLRDSAAFFDSVPVARR 120
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKL--LNVGF 143
D V +N+M+ + A A A+ +F + ++D+ +R D+++ TS L+ ++ L V
Sbjct: 121 DTVLHNAMISAFARAS-LAAPAVSVFRSLLASDDSLRPDDYSFTSLLSAVGQMHDLAVSH 179
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRC---YEEACRVFEGCTEEVNLISKNAMVA 200
QLH + K A ++LI +Y KC +A +V + E+ L + +V
Sbjct: 180 CTQLHCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDEL-TWTTIVV 238
Query: 201 ACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEH 260
R+G++ A F D V WN +ISGYVQ+G E +LF RM + +E
Sbjct: 239 GHVRKGDVHAARSAFEEIDGEFDVV-WNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEF 297
Query: 261 TFASALSACCGLRNVKCAKEIHSWVLKNGLISNP----FVSSGIVDVYCKCENMNYAESM 316
TF S LSAC K +H ++ P V++ +V +Y K + A +
Sbjct: 298 TFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKI 357
Query: 317 LLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALF 376
+++ S ++++ GY G ++ A R F + K+ + W + SGYV E
Sbjct: 358 FDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDAL 417
Query: 377 DLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDM 436
L ++ +++ D + AC AL GK++HA++++ G + + L+ M
Sbjct: 418 KLFNQMRSEDVKPCD-YTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTM 476
Query: 437 YSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTF 496
Y++CG + A ++F D V +N MI+ HGH +A+ LF++M+ +GI PD ++F
Sbjct: 477 YARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISF 536
Query: 497 VAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIP 556
+ IL+A H G V+ G +YF SM D+ ISP DHYA +IDL GRA ++ +A + +K++P
Sbjct: 537 LTILTACNHAGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMP 596
Query: 557 TEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGR 616
E I + L+ CR+N + EL A ++L ++ + Y+ L+N Y+A G W + R
Sbjct: 597 FEPTPAIWEAILSGCRINGDMELGAYAADQLFKMVPEHDGTYILLSNTYSAAGRWVDAAR 656
Query: 617 IRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
+RK MR + GCSW+ V +++H+F VGD HP + +Y L + ++ ++
Sbjct: 657 VRKLMRDRGVKKEPGCSWIEVGNKVHVFLVGDTKHPDAHEVYRFLEMVGAKMRKLG 712
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 64/146 (43%), Gaps = 6/146 (4%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
LK H ++ G + N L+ +Y++ ++++R +F MP + SWN +ISA
Sbjct: 448 LKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISA 507
Query: 66 CIKSHDLKQARSLFD----SSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+ ++A LFD + D +++ ++L N G D + F M+ D I
Sbjct: 508 LGQHGHGREALELFDQMVAQGIYPDRISFLTILTA-CNHAGLVDDGFQYFESMER-DFGI 565
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQL 147
E ++L + +G R L
Sbjct: 566 SPGEDHYARLIDLLGRAGRIGEARDL 591
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 188/579 (32%), Positives = 293/579 (50%), Gaps = 67/579 (11%)
Query: 83 PHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVG 142
P ++LV++ +M+ G + ++A++ F M+ E +F +S + C L ++
Sbjct: 2 PQRNLVSWTAMISGLSQNSKF-SEAIRTFCGMRICGE--VPTQFAFSSAIRACASLGSIE 58
Query: 143 FGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAAC 202
G+Q+H +K + F S+L DMYSKC +AC+VFE
Sbjct: 59 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFE------------------ 100
Query: 203 CREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTF 262
EM K D VSW +I GY + G+ EE L F +M + V ++H
Sbjct: 101 ------EMPCK---------DEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVL 145
Query: 263 ASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGV 322
S L AC L+ K + +HS V+K G S+ FV + + D+Y K +M A
Sbjct: 146 CSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESAS-------- 197
Query: 323 RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF 382
N F I S E R NVV +T L GYV+ + E + E
Sbjct: 198 -NVFGIDS------------ECR---------NVVSYTCLIDGYVETEQIEKGLSVFVE- 234
Query: 383 VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGN 442
+ ++G+ + L+ ACA QAAL G ++HA ++++ D + S LVDMY KCG
Sbjct: 235 LRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGL 294
Query: 443 MTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
+ A F + + +N +++ + HG + AI +FE M+++G+KP+A+TF+++L+
Sbjct: 295 LEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTG 354
Query: 503 FRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAV 562
H G VE G YF SM Y + P +HY+C+IDL GRA +L++A EF+ +P E +A
Sbjct: 355 CSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAF 414
Query: 563 ILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMR 622
SFL CR++ + E+ A EKL++LE N V L+N+YA E W ++ +R +MR
Sbjct: 415 GWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMR 474
Query: 623 GMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+ G SWV V ++ H+F D SHP+ +AIY L
Sbjct: 475 DGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKL 513
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 118/491 (24%), Positives = 204/491 (41%), Gaps = 102/491 (20%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A+K G+ + L +YSK + ++ K+F+EMP C
Sbjct: 64 HCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMP-------------C------ 104
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
KD V++ +M+ GY +E +AL F +M DE + +D+ + STL
Sbjct: 105 ------------KDEVSWTAMIDGYSKIGEFE-EALLAFKKM--IDEEVTIDQHVLCSTL 149
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C L FGR +H+ +VK ++ F ++L DMYSK
Sbjct: 150 GACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKA------------------- 190
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
G+ME A F E + VS+ LI GYV+ E+GL +FV +
Sbjct: 191 -------------GDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRR 237
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G+ NE TF+S + AC ++ ++H+ V+K +PFVSS +VD+Y KC
Sbjct: 238 QGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKC----- 292
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G +E+A + FD + + + W +L S + +
Sbjct: 293 --------------------------GLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLG 326
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE-IHAYILRMGVQMDKKLIS 431
+ + V + GV +A+ + LL C+ + G + ++ GV ++ S
Sbjct: 327 KDAIKIFERMVDR-GVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYS 385
Query: 432 TLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
++D+ + G + A E I + E + + + HG +E L E++++ ++
Sbjct: 386 CVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVK--LE 443
Query: 491 PDAVTFVAILS 501
P + +LS
Sbjct: 444 PKNSGALVLLS 454
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 102/201 (50%), Gaps = 8/201 (3%)
Query: 351 LTEKNVVVWTALFSGYVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALH 409
+ ++N+V WTA+ SG + ++ EA+ + E V + ACA ++
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGE--VPTQFAFSSAIRACASLGSIE 58
Query: 410 PGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYA 469
GK++H L+ G+ + + S L DMYSKCG M A +F+ +D V + MI Y+
Sbjct: 59 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYS 118
Query: 470 HHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPET 529
G E+A+L F++M+++ + D + L A CG+++ + + ++ K+ E+
Sbjct: 119 KIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGA---CGALKACKFGRSVHSSVVKLGFES 175
Query: 530 DHYA--CMIDLYGRANQLEKA 548
D + + D+Y +A +E A
Sbjct: 176 DIFVGNALTDMYSKAGDMESA 196
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 7/115 (6%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L++ H Q +K ++ L+ +Y K LL ++ + FDE+ + +WN+++S
Sbjct: 260 LEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSV 319
Query: 66 CIKSHDL-KQARSLF----DSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQ 115
H L K A +F D + +T+ S+L G +A G + L F M
Sbjct: 320 -FGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHA-GLVEEGLDYFYSMD 372
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 203/643 (31%), Positives = 331/643 (51%), Gaps = 26/643 (4%)
Query: 21 LTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFD 80
L I +N+ I + + + ++ +LF MP R+ ++N +++ + L A SLF
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 81 SSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLN 140
+ P D +YN++L + ADA LF EM D +VT + + +
Sbjct: 94 AIPRPDNYSYNTLLHA-LAVSSSLADARGLFDEMPVRD--------SVTYNVMISSHANH 144
Query: 141 VGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVA 200
H F + DA + + ++ Y + EEA +F TE ++IS NA+++
Sbjct: 145 GLVSLARHYFDLAPEKDAVSW--NGMLAAYVRNGRVEEARGLFNSRTE-WDVISWNALMS 201
Query: 201 ACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEH 260
+ G+M A + F R P D VSWN ++SGY + GD E +LF VR +
Sbjct: 202 GYVQWGKMSEARELFDRMPG-RDVVSWNIMVSGYARRGDMVEARRLF---DAAPVR-DVF 256
Query: 261 TFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLK 320
T+ + +S ++ A+ + + + +S + +V Y + M+ A+ + +
Sbjct: 257 TWTAVVSGYAQNGMLEEARRVFDAMPERNAVS----WNAMVAAYIQRRMMDEAKELFNMM 312
Query: 321 GVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLS 380
RN S ++M+ GY+ G +EEA+ FD++ +K+ V W A+ + Y + E L
Sbjct: 313 PCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFI 372
Query: 381 EFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC 440
E + + G + +L CA AAL G ++H ++R G + + + L+ MY KC
Sbjct: 373 E-MGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKC 431
Query: 441 GNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAIL 500
GNM A F+ ERD+V +N MIA YA HG ++A+ +F+ M KPD +T V +L
Sbjct: 432 GNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVL 491
Query: 501 SAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEED 560
+A H G VE G YF SM D+ ++ + +HY CMIDL GRA +L +A + MK +P E D
Sbjct: 492 AACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPD 551
Query: 561 AVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQ 620
+ + G+ L R++RN EL A EK+ LE N YV L+N+YA+ G W + ++R
Sbjct: 552 STMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVM 611
Query: 621 M--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
M RG+K + G SW+ V++++H F+ GD HP+ IY+ L
Sbjct: 612 MEERGVK--KVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFL 652
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + I+AG + N L+ +Y K + ++R F+EM ER+V SWNT+I+ +
Sbjct: 406 HGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFG 465
Query: 73 KQARSLFD 80
K+A +FD
Sbjct: 466 KEALEIFD 473
>gi|225432410|ref|XP_002276935.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36980,
mitochondrial-like [Vitis vinifera]
Length = 623
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 200/620 (32%), Positives = 314/620 (50%), Gaps = 16/620 (2%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
++F + I A K + AR LFD PHKD V +N+ML Y + G AL LF M
Sbjct: 4 HLFQTTSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASY-SQLGLHQQALCLFHHM 62
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
+ A+ R D FT T+TL+ C L + G ++HA +V + +S +SLIDMY KC
Sbjct: 63 RIANS--RPDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCL 120
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
A RVFE + +N +S +++ A G ++A F P+ + ++WN +ISGY
Sbjct: 121 SATSARRVFEEMSI-MNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVE-IAWNIMISGY 178
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
Q GD E L LF +M E+ ++ ++ TF++ ++A C L+ +H +++K+G +
Sbjct: 179 GQCGDVELCLGLFKKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWVKAV 238
Query: 295 FVSSGIVDVY----CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
VS+ I+ Y CK + M ES+ G+ S ++MI + G+ EA F
Sbjct: 239 EVSNSILSFYSKLGCKDDVMKVFESI----GILTQVSWNAMIDAHMKIGDTHEAFLVFQL 294
Query: 351 LTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHP 410
EKNVV WT++ +GY + + E + + + D +L AC+ A L
Sbjct: 295 APEKNVVSWTSMITGYARNGHGEQALSFFVKMMENH-IQPDDFTFGAVLHACSSLATLGH 353
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
GK IH I+ G + + LV+MY+KCG++ + F+ + +DLV +N M+
Sbjct: 354 GKMIHGSIIHYGFHAYVDVGNGLVNMYAKCGDIQGSNTAFKEILGKDLVSWNAMLFGLGM 413
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD 530
HGH +A+ L+EEM+ G+KPD VTF+ +L H G +E G+ F SM + Y +S ET+
Sbjct: 414 HGHATQALELYEEMVASGMKPDKVTFIGLLMTCSHSGLIEKGQALFESMVSVYGLSQETE 473
Query: 531 HYACMIDLYGRANQLEKAIEFMK--SIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLL 588
H CM+DL GR L +A E + S + + + L C + + E L
Sbjct: 474 HVVCMVDLLGRGGYLAQARELVDEYSRTGRAETSLPEALLGACFAHSEVRMGANLGEYLK 533
Query: 589 RLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGD 648
E + YV L+N+Y G W E +RK M + GCSW+ V +++ +F G+
Sbjct: 534 VFEPQKEMSYVLLSNLYCVSGQWKEAEMVRKTMTDHGVKKMPGCSWIEVRNKVTVFVAGN 593
Query: 649 VSHPKTNAIYSVLAIFTGEL 668
SHP + +L E+
Sbjct: 594 HSHPYMEELCKILNFLKFEM 613
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 117/470 (24%), Positives = 216/470 (45%), Gaps = 42/470 (8%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L+ + H Q + +G + N LI +Y K +R++F+EM N SW +++ A
Sbjct: 87 LRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARRVFEEMSIMNEVSWCSLLFA 146
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
S AR +FD P K + +N M+ GY E L LF +M+ ++ ++ D+
Sbjct: 147 YTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGDVEL-CLGLFKKMR--EDSLQPDQ 203
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
+T ++ +N +L +G +H F++K+ + +S++ YSK C ++ +VFE
Sbjct: 204 WTFSALVNALCELQEPSYGYMMHGFIIKSGWVKAVEVSNSILSFYSKLGCKDDVMKVFES 263
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
+ +S NAM+ A + G+ A F PE N VSW ++I+GY +NG E+ L
Sbjct: 264 IG-ILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKN-VVSWTSMITGYARNGHGEQALS 321
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
FV+M EN ++ ++ TF + L AC L + K IH ++ G + V +G+V++Y
Sbjct: 322 FFVKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVDVGNGLVNMYA 381
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
KC G+++ + F + K++V W A+ G
Sbjct: 382 KC-------------------------------GDIQGSNTAFKEILGKDLVSWNAMLFG 410
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM-GVQ 424
+ +L E V G+ D + + LL C+ + G+ + ++ + G+
Sbjct: 411 LGMHGHATQALELYEEMVA-SGMKPDKVTFIGLLMTCSHSGLIEKGQALFESMVSVYGLS 469
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIER---DLVLYNVMI-ACYAH 470
+ + + +VD+ + G + A + + + L ++ AC+AH
Sbjct: 470 QETEHVVCMVDLLGRGGYLAQARELVDEYSRTGRAETSLPEALLGACFAH 519
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 203/660 (30%), Positives = 324/660 (49%), Gaps = 77/660 (11%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIH--IYSKHNLLRESRKLFDEMPERNVFSWNTII 63
L+ I H Q IK GL T ++L+ + S H FD +P
Sbjct: 15 LQSLRIIHAQMIKTGLHNTNYALSKLLEXCVLSPH---------FDGLP----------- 54
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
A S+FD+ L+ +N+M G+ + ALKL++ M S +
Sbjct: 55 ----------YAISVFDTIQEPXLLIWNTMFRGHALSSD-PVSALKLYVCMVSLG--LLP 101
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
+ +T L C K G+QLH ++K D + +SLI MY + E+A +V
Sbjct: 102 NSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVX 161
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
+ + +++S A++ G +E A K F P + D VSWN ISGY + G+ +E
Sbjct: 162 DKSSHR-DVVSYTALITGYASRGXIESAHKMFDEIP-VKDVVSWNAXISGYAETGNYKEA 219
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
L+LF +M + VR +E T + LSAC +++ +++HSW+ +G N + + ++D+
Sbjct: 220 LELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDL 279
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y KC G +E A F L+ K+V+ W L
Sbjct: 280 YSKC-------------------------------GELETACGLFQGLSNKDVISWNTLI 308
Query: 364 SGYVKAQ-NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM- 421
GY EAL LL + + + G + + ++ +L ACA A+ G+ IH YI +
Sbjct: 309 GGYTHMNLYKEAL--LLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRL 366
Query: 422 -GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
GV L ++L+DMY+KCG++ A+ +F + + R L +N MI +A HG A +
Sbjct: 367 KGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDI 426
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
F M + GI+PD +TFV +LSA H G +++G F SMT DYK+ P+ +HY CMIDL G
Sbjct: 427 FSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXG 486
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQ 600
+ ++A + + ++ E D VI S L C+++ N EL + L+++E N YV
Sbjct: 487 HSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVL 546
Query: 601 LANVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
L+N+YA W E+ + R + +GMK + GCS + ++ +H F +GD HP+ IY
Sbjct: 547 LSNIYATAERWNEVAKTRALLNDKGMK--KVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 604
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 154/595 (25%), Positives = 257/595 (43%), Gaps = 119/595 (20%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
+S KE H Q +K G L LI +Y ++ L +++K+ D+ R+V S+
Sbjct: 115 KSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTA 174
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I+ ++ A +FD P KD+V++N+ + GY Y+ +AL+LF +M + +
Sbjct: 175 LITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYK-EALELFKKMMKTN--V 231
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
R DE T+ + L+ C + ++ GRQ+H+++ + V++LID+YSKC E AC
Sbjct: 232 RPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACG 291
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F+G + + D +SWNTLI GY +
Sbjct: 292 LFQGLSNK---------------------------------DVISWNTLIGGYTHMNLYK 318
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLK--NGLISNPFVSSG 299
E L LF M +G + N+ T S LSAC L + + IH ++ K G+ + + +
Sbjct: 319 EALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS 378
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
++D+Y KC G++E A++ FDS+ +++ W
Sbjct: 379 LIDMYAKC-------------------------------GDIEAAQQVFDSMLNRSLSSW 407
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
A+ G+ A FD+ S + K G+ D + V LL AC+ L G+ I +
Sbjct: 408 NAMIFGFAMHGRANAAFDIFSR-MRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMT 466
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
R D KL+ L Y MI H G ++A
Sbjct: 467 R-----DYKLMPKLEH-------------------------YGCMIDLXGHSGLFKEAEK 496
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD-HYACMIDL 538
+ M ++PD V + ++L A + G+VE+GE Y ++ KI PE Y + ++
Sbjct: 497 MINTM---EMEPDGVIWCSLLKACKMHGNVELGESYAQNLI---KIEPENPGSYVLLSNI 550
Query: 539 YG---RANQLEKAIEF-----MKSIP----TEEDAVILGSFLNVCRLNRNAELAG 581
Y R N++ K MK +P E D+V+ + RN E+ G
Sbjct: 551 YATAERWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYG 605
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 144/331 (43%), Gaps = 64/331 (19%)
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLL 319
H S L C L++++ IH+ ++K GL N NYA S LL
Sbjct: 3 HPSLSLLHXCKTLQSLRI---IHAQMIKTGL-----------------HNTNYALSKLLE 42
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLL 379
V +S G + A FD++ E +++W +F G+ + + + L
Sbjct: 43 XCV-----LSPHFDG------LPYAISVFDTIQEPXLLIWNTMFRGHALSSDPVSALKLY 91
Query: 380 SEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
V+ G++ ++ LL +CA A G+++H +L+ G +D + ++L+ MY +
Sbjct: 92 VCMVSL-GLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQ 150
Query: 440 CGNM----------------TYAEII---------------FQNFIERDLVLYNVMIACY 468
G + +Y +I F +D+V +N I+ Y
Sbjct: 151 NGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGY 210
Query: 469 AHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE 528
A G+ ++A+ LF++M++ ++PD T V +LSA GS+E+G + +S D+
Sbjct: 211 AETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQ-VHSWINDHGFGXN 269
Query: 529 TDHYACMIDLYGRANQLEKAIEFMKSIPTEE 559
+IDLY + +LE A + + ++
Sbjct: 270 LKIVNALIDLYSKCGELETACGLFQGLSNKD 300
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 179/604 (29%), Positives = 304/604 (50%), Gaps = 41/604 (6%)
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
++ A + D ++A+ LFD+ P D T ++++ + G +A++L+ +++ I
Sbjct: 72 LLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAF-TTRGLPNEAIRLYASLRA--RGI 128
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+ + C + +++H ++ + F ++LI Y KC+C E A R
Sbjct: 129 KPHNSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARR 188
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
VF+ +L+ K D VSW ++ S YV G
Sbjct: 189 VFD------DLVVK---------------------------DVVSWTSMSSCYVNCGLPR 215
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
GL +F MG NGV+ N T +S L AC L+++K + IH + +++G+I N FV S +V
Sbjct: 216 LGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMIENVFVCSALV 275
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNV----V 357
+Y +C ++ A + L R+ S + ++ Y ++ F ++ K V
Sbjct: 276 SLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEA 335
Query: 358 VWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
W A+ G ++ E ++L + + G + + + L AC++ +L GKE+H Y
Sbjct: 336 TWNAVIGGCMENGQTEKAVEMLRK-MQNLGFKPNQITISSFLPACSILESLRMGKEVHCY 394
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
+ R + D ++ LV MY+KCG++ + +F +D+V +N MI A HG+ +
Sbjct: 395 VFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIANAMHGNGREV 454
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID 537
+LLFE ML+ GIKP++VTF +LS H VE G + FNSM D+ + P+ +HYACM+D
Sbjct: 455 LLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYACMVD 514
Query: 538 LYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKAR 597
++ RA +L +A EF++ +P E A G+ L CR+ +N ELA + KL +E NN
Sbjct: 515 VFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACRVYKNVELAKISANKLFEIEPNNPGN 574
Query: 598 YVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
YV L N+ W+E R M+ + GCSW+ V +H F VGD ++ +++ I
Sbjct: 575 YVSLFNILVTAKLWSEASEARILMKERGITKTPGCSWLQVGDRVHTFVVGDKNNMESDKI 634
Query: 658 YSVL 661
Y+ L
Sbjct: 635 YNFL 638
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 112/489 (22%), Positives = 216/489 (44%), Gaps = 52/489 (10%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H AI+ G+ N LIH Y K + +R++FD++ ++V SW T +S+C
Sbjct: 155 HDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVVSW-TSMSSC------ 207
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
Y+N G L +F EM ++ + T++S L
Sbjct: 208 ------------------------YVNC-GLPRLGLAVFCEM--GWNGVKPNSVTLSSIL 240
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C +L ++ GR +H F V+ + F S+L+ +Y++C ++A VF+ ++
Sbjct: 241 PACSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFD-LMPHRDV 299
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELN---DAVSWNTLISGYVQNGDAEEGLKLFVR 249
+S N ++ A E + L F + D +WN +I G ++NG E+ +++ +
Sbjct: 300 VSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRK 359
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
M G + N+ T +S L AC L +++ KE+H +V ++ LI + + +V +Y KC +
Sbjct: 360 MQNLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGD 419
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE----KNVVVWTALFSG 365
+N + ++ + ++ + ++MI+ ++ GN E F+S+ + N V +T + SG
Sbjct: 420 LNLSRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSG 479
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
++ E + + V DA ++ + LH E + +I RM ++
Sbjct: 480 CSHSRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLH---EAYEFIQRMPMEP 536
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFIERD-------LVLYNVMIACYAHHGHEEKAI 478
L+ N+ A+I E + + L+N+++ E I
Sbjct: 537 TASAWGALLGACRVYKNVELAKISANKLFEIEPNNPGNYVSLFNILVTAKLWSEASEARI 596
Query: 479 LLFEEMLEK 487
L+ E + K
Sbjct: 597 LMKERGITK 605
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 138/291 (47%), Gaps = 40/291 (13%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+LK H A++ G+ + L+ +Y++ ++++R +FD MP R+V SWN +++
Sbjct: 248 DLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLT 307
Query: 65 ACIKSHDLKQARSLFDSSPHK----DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
A + + + +LF K D T+N+++ G + G A+++ +MQ+
Sbjct: 308 AYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCME-NGQTEKAVEMLRKMQNLG-- 364
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
+ ++ T++S L C L ++ G+++H ++ + +++L+ MY+KC
Sbjct: 365 FKPNQITISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKC------- 417
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
++NL S+N C + D V+WNT+I +G+
Sbjct: 418 -------GDLNL-SRNVFDMICRK------------------DVVAWNTMIIANAMHGNG 451
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI 291
E L LF M ++G++ N TF LS C R V+ +I + + ++ L+
Sbjct: 452 REVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLV 502
>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 203/713 (28%), Positives = 339/713 (47%), Gaps = 78/713 (10%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R +++ + H IK G L L++ Y + L ++ ++F EMP WN
Sbjct: 145 RVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNE 204
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
I ++S L++ ++LF +MQ + +
Sbjct: 205 AIILNLQSEKLQKG--------------------------------VELFRKMQFS--FL 230
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+ + T+ L C K+ + +Q+H ++ + D+ + LI MYSK E A R
Sbjct: 231 KAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARR 290
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN---DAVSWNTLISGYVQNG 238
VF+ E N S N+M+++ G + A F+ + D V+WN L+SG+ +G
Sbjct: 291 VFDS-MENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHG 349
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
EE L + RM G + N + S L A L + KE H +VL+NG + +V +
Sbjct: 350 YKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGT 409
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK---- 354
++D+Y K ++ A+++ RN F+ +S++ GYS +G E+A R + + ++
Sbjct: 410 SLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKP 469
Query: 355 -----------------------------------NVVVWTALFSGYVKAQNCEALFDLL 379
NVV WTAL SG +A N
Sbjct: 470 DLVTWNGMISGYAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFF 529
Query: 380 SEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
++ + +EGV+ ++ + LL ACA + L GKEIH +R G D + + L+DMYSK
Sbjct: 530 AQ-MQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSK 588
Query: 440 CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
++ A +F+ + L +N MI +A G ++AI +F EM + G+ PDA+TF A+
Sbjct: 589 SSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTAL 648
Query: 500 LSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE 559
LSA ++ G + G KYF+SM DY+I P +HY CM+DL GRA L++A + + ++P +
Sbjct: 649 LSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKP 708
Query: 560 DAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRK 619
DA I G+ L CR+++N + A A + L +LE NN A Y+ + N+Y+ W +M +R+
Sbjct: 709 DATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRE 768
Query: 620 QMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
M SW+ + +H+F+ + HP IY L E+ ++
Sbjct: 769 LMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLG 821
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 128/565 (22%), Positives = 258/565 (45%), Gaps = 57/565 (10%)
Query: 22 TLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDS 81
+T++T+ +++H +++ +K + +N +IS+ + D A +F
Sbjct: 42 VITSLTSVKMMHA----QMIKLPQKWNPDAAAKN------LISSYLGFGDFWSAAMVFYV 91
Query: 82 SPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNV 141
++ + +NS + + ++ G L++F E+ + + D + L C +++++
Sbjct: 92 GLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHG--KGVVFDSEVYSVALKTCTRVMDI 149
Query: 142 GFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAA 201
G ++H ++K D + +L++ Y +C E+A +VF
Sbjct: 150 WLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFH----------------- 192
Query: 202 CCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHT 261
EM PE A+ WN I +Q+ ++G++LF +M + ++ T
Sbjct: 193 -------EMP------NPE---ALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETAT 236
Query: 262 FASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKG 321
L AC + + AK+IH +V + GL S+ + + ++ +Y K + A +
Sbjct: 237 IVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSME 296
Query: 322 VRNSFSISSMIVGYSLQGNMEEARRHFDSL----TEKNVVVWTALFSGYVKAQNCEALFD 377
RN+ S +SMI Y+ G + +A F L + ++V W L SG+ E + +
Sbjct: 297 NRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLN 356
Query: 378 LLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMY 437
+L + EG ++ + +L A + L+ GKE H Y+LR G D + ++L+DMY
Sbjct: 357 ILQR-MQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMY 415
Query: 438 SKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFV 497
K ++T A+ +F N R++ +N +++ Y+ G E A+ L +M ++GIKPD VT+
Sbjct: 416 VKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWN 475
Query: 498 AILSAFRH--CGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSI 555
++S + CG + + T ++P + +I +A +++F +
Sbjct: 476 GMISGYAMWGCGKEALAVLH---QTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQM 532
Query: 556 PTEEDAVILGSFLNVCRLNRNAELA 580
+++ V+ S C L A L+
Sbjct: 533 --QQEGVMPNSASITCLLRACASLS 555
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 181/590 (30%), Positives = 309/590 (52%), Gaps = 41/590 (6%)
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGY-INAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
L A S+F++ +L+ +N+M G+ +N++ ALKL++ M S + + ++
Sbjct: 15 LSYAISIFETIQEPNLLIWNTMFRGHALNSD--SVTALKLYVCMISLG--LLPNSYSFPF 70
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L C K + G+Q+H ++K D + +SLI MY++ E+A +VF+ +
Sbjct: 71 LLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHR- 129
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
+++S A++ G + A K F + + D VSWN +ISGYV+ + +E L+L+ M
Sbjct: 130 HVVSYTALITGYASRGYINNARKLF-DEISVKDVVSWNAMISGYVETCNFKEALELYKDM 188
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
+ V+ +E T + +SAC +++ +++HSW+ +G SN + + ++D+Y KC
Sbjct: 189 MKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKC--- 245
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
G +E A F L +K+V+ W L G+
Sbjct: 246 ----------------------------GEVETACGLFQGLAKKDVISWNTLIGGHTHMN 277
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM--GVQMDKK 428
+ L E + + G + + ++ +L ACA A+ G+ IH YI + GV
Sbjct: 278 LYKEALLLFQEML-RSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASS 336
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
L+++L+DMY+KCG++ A+ +F + + R L +N MI +A HG A LF +M + G
Sbjct: 337 LLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNG 396
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
I PD +TFV +LSA H G +++G F SM+ DYKI+P+ +HY CMIDL G ++A
Sbjct: 397 IDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEA 456
Query: 549 IEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAE 608
E ++++P E D VI S L C+++ N EL + L+++E N YV L+N+YA
Sbjct: 457 KEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIKIEPENPGSYVLLSNIYATA 516
Query: 609 GNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
G W ++ +IR + + GCS + ++ +H F +GD HP+ IY
Sbjct: 517 GRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSVVHEFIIGDKFHPRNREIY 566
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 145/551 (26%), Positives = 243/551 (44%), Gaps = 108/551 (19%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
+S L E H +K G L LI +Y+++ L ++ K+FD R+V S+
Sbjct: 77 KSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTA 136
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I+ + AR LFD KD+V++N+M+ GY+ ++ +AL+L+ +M + +
Sbjct: 137 LITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFK-EALELYKDMMKTN--V 193
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+ DE T+ + ++ C + ++ GRQLH+++ ++ V+ LID+YSKC E AC
Sbjct: 194 KPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACG 253
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F+G ++ D +SWNTLI G+ +
Sbjct: 254 LFQGLAKK---------------------------------DVISWNTLIGGHTHMNLYK 280
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E L LF M +G N+ T S L AC L + + IH ++ K
Sbjct: 281 EALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKR------------- 327
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFS-ISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
LKGV N+ S ++S+I Y+ G++E A++ FDS+ +++ W
Sbjct: 328 -----------------LKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWN 370
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
A+ G+ A FDL S+ + K G+ D + V LL AC+ L G+ +I R
Sbjct: 371 AMIFGFAMHGKANAAFDLFSK-MRKNGIDPDDITFVGLLSACSHSGMLDLGR----HIFR 425
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
+ D K+ L Y MI H G ++A +
Sbjct: 426 -SMSQDYKITPKLEH-------------------------YGCMIDLLGHCGLFKEAKEM 459
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD-HYACMIDLY 539
M ++PD V + ++L A + +VE+GE Y ++ KI PE Y + ++Y
Sbjct: 460 IRTM---PMEPDGVIWCSLLKACKMHNNVELGESYAQNLI---KIEPENPGSYVLLSNIY 513
Query: 540 ---GRANQLEK 547
GR +Q+ K
Sbjct: 514 ATAGRWDQVAK 524
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 186/604 (30%), Positives = 299/604 (49%), Gaps = 73/604 (12%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N +++ KS+ K A +FD PH+D++++NSM+ G + G A++LF+ M E
Sbjct: 235 NALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISG-CTSNGLYDKAIELFVRMWLEGE 293
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
+D T+ S L C +L + GR +H + VKT + + L+DMYS C +
Sbjct: 294 E--LDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRST 351
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
++F N++ KN VSW +I+ Y + G
Sbjct: 352 NKIFR------NMVQKNV---------------------------VSWTAMITSYTRAGL 378
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
++ LF MG G R + SAL A G +K K +H + ++NG+ V++
Sbjct: 379 YDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNA 438
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
++++Y KC GNMEEA+ FD + K+++ W
Sbjct: 439 LMEMYVKC-------------------------------GNMEEAKLIFDGVVSKDMISW 467
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
L GY + F L +E + + + +A+ + +L A A ++L G+E+HAY L
Sbjct: 468 NTLIGGYSRNNLANEAFSLFTEMLLQ--LRPNAVTMTCILPAAASLSSLERGREMHAYAL 525
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
R G D + + L+DMY KCG + A +F ++L+ + +M+A Y HG AI
Sbjct: 526 RRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIA 585
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
LFE+M GI PDA +F AIL A H G + G ++F++M ++KI P HY CM+DL
Sbjct: 586 LFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLL 645
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYV 599
L++A EF+ S+P E D+ I S L CR++RN +LA E E++ LE N YV
Sbjct: 646 INTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLAEEVAERVFELEPENTGYYV 705
Query: 600 QLANVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
LAN+YA W + +++ ++ RG++ N GCSW+ + ++H+F + +HP+ I
Sbjct: 706 LLANIYAEAERWEAVRKLKNKIGGRGLREN--TGCSWIEAKGKVHVFIADNRNHPQGTRI 763
Query: 658 YSVL 661
L
Sbjct: 764 AEFL 767
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 129/549 (23%), Positives = 219/549 (39%), Gaps = 143/549 (26%)
Query: 11 ICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSH 70
+ H ++K G T N L+ +YS + R + K+F M ++NV SW +I++
Sbjct: 318 VVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITS----- 372
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
Y A Y+ A LF EM E R D F +TS
Sbjct: 373 --------------------------YTRAGLYDKVA-GLFQEM--GLEGTRPDIFAITS 403
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L+ + G+ +H + ++ + ++L++MY KC EEA +F+G
Sbjct: 404 ALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDG----- 458
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
++SK D +SWNTLI GY +N A E LF M
Sbjct: 459 -VVSK---------------------------DMISWNTLIGGYSRNNLANEAFSLFTEM 490
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
+R N T L A L +++ +E+H++ L+ G + + FV++ ++D+Y KC
Sbjct: 491 LLQ-LRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKC--- 546
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY---V 367
LLL ARR FD L+ KN++ WT + +GY
Sbjct: 547 ----GALLL------------------------ARRLFDRLSNKNLISWTIMVAGYGMHG 578
Query: 368 KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDK 427
+ ++ ALF E + G+ DA +L AC+ H G + ++ +
Sbjct: 579 RGRDAIALF----EQMRVSGIAPDAASFSAILYACS-----HSGLRDEGWRFFDAMRKEH 629
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
K IE L Y M+ + G+ ++A + M
Sbjct: 630 K-------------------------IEPRLKHYTCMVDLLINTGNLKEAYEFIDSM--- 661
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE-TDHYACMIDLYGRANQLE 546
I+PD+ +V++L R +V++ E+ + +++ PE T +Y + ++Y A + E
Sbjct: 662 PIEPDSSIWVSLLRGCRIHRNVKLAEEVAERV---FELEPENTGYYVLLANIYAEAERWE 718
Query: 547 KAIEFMKSI 555
+ I
Sbjct: 719 AVRKLKNKI 727
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 128/290 (44%), Gaps = 41/290 (14%)
Query: 217 RQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVK 276
+ P+ N I ++GD EE L L +G +GV ++ ++ + L C +R+++
Sbjct: 54 KSPDWVPTSDVNLHIQRLCRSGDLEEALGL---LGSDGV--DDRSYGAVLQLCSEVRSLE 108
Query: 277 CAKEIHSWVLKNGLISNPF---VSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIV 333
K H V + L + + +V +Y KC
Sbjct: 109 GGKRAHFLVRASSLGRDGMDNVLGQKLVLMYLKC-------------------------- 142
Query: 334 GYSLQGNMEEARRHFDSLTE-KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDA 392
G++E ARR FD + + +V VWTAL SGY KA + LL + GV DA
Sbjct: 143 -----GDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGV-LLFRKMHCCGVRPDA 196
Query: 393 LILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQN 452
+ +L A ++ G+ +H + ++G + + L+ Y+K A ++F
Sbjct: 197 YTISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDG 256
Query: 453 FIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
RD++ +N MI+ +G +KAI LF M +G + D+ T +++L A
Sbjct: 257 MPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPA 306
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 111/271 (40%), Gaps = 70/271 (25%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
LK H AI+ G+ TN L+ +Y K + E++ +FD + +++ SWNT+I
Sbjct: 414 LKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGG 473
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
+++ +A SLF ML +R +
Sbjct: 474 YSRNNLANEAFSLF-----------TEMLL------------------------QLRPNA 498
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
T+T L L ++ GR++HA+ ++ F ++LIDMY KC A R+F+
Sbjct: 499 VTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFD- 557
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
L +KN +SW +++GY +G + +
Sbjct: 558 -----RLSNKN---------------------------LISWTIMVAGYGMHGRGRDAIA 585
Query: 246 LFVRMGENGVRWNEHTFASALSAC--CGLRN 274
LF +M +G+ + +F++ L AC GLR+
Sbjct: 586 LFEQMRVSGIAPDAASFSAILYACSHSGLRD 616
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 83/182 (45%), Gaps = 8/182 (4%)
Query: 398 LLGACALQAALHPGKEIHAYILRMGV----QMDKKLISTLVDMYSKCGNMTYAEIIFQNF 453
+L C+ +L GK H +++R MD L LV MY KCG++ A +F
Sbjct: 97 VLQLCSEVRSLEGGKRAH-FLVRASSLGRDGMDNVLGQKLVLMYLKCGDLENARRVFDEM 155
Query: 454 IE-RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMG 512
+ D+ ++ +++ YA G + +LLF +M G++PDA T +L GS+E G
Sbjct: 156 PQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSIEDG 215
Query: 513 EKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCR 572
E + + + ++ Y ++N+ + AI +P D + S ++ C
Sbjct: 216 E-VVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMP-HRDVISWNSMISGCT 273
Query: 573 LN 574
N
Sbjct: 274 SN 275
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 202/643 (31%), Positives = 329/643 (51%), Gaps = 26/643 (4%)
Query: 21 LTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFD 80
L I +N+ I + + + ++ +LF MP R+ ++N +++ + L A SLF
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 81 SSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLN 140
+ P D +YN++L + ADA LF EM D +VT + + +
Sbjct: 94 AIPRPDNYSYNTLLHA-LAVSSSLADARGLFDEMPVRD--------SVTYNVMISSHANH 144
Query: 141 VGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVA 200
H F + DA + + ++ Y + EEA +F TE ++IS NA+++
Sbjct: 145 GLVSLARHYFDLAPEKDAVSW--NGMLAAYVRNGRVEEARGLFNSRTE-WDVISWNALMS 201
Query: 201 ACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEH 260
+ G+M A + F R P D VSWN ++SGY + GD E +LF V
Sbjct: 202 GYVQWGKMSEARELFDRMPG-RDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDV----F 256
Query: 261 TFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLK 320
T+ + +S ++ A+ + + + +S + +V Y + M+ A+ + +
Sbjct: 257 TWTAVVSGYAQNGMLEEARRVFDAMPERNAVS----WNAMVAAYIQRRMMDEAKELFNMM 312
Query: 321 GVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLS 380
RN S ++M+ GY+ G +EEA+ FD++ +K+ V W A+ + Y + E L
Sbjct: 313 PCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFI 372
Query: 381 EFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC 440
E + + G + +L CA AAL G ++H ++R G + + + L+ MY KC
Sbjct: 373 E-MGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKC 431
Query: 441 GNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAIL 500
GNM A F+ ERD+V +N MIA YA HG ++A+ +F+ M KPD +T V +L
Sbjct: 432 GNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVL 491
Query: 501 SAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEED 560
+A H G VE G YF SM D+ ++ + +HY CMIDL GRA +L +A + MK +P E D
Sbjct: 492 AACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPD 551
Query: 561 AVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQ 620
+ + G+ L R++RN EL A EK+ LE N YV L+N+YA+ G W + ++R
Sbjct: 552 STMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVM 611
Query: 621 M--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
M RG+K + G SW+ V++++H F+ GD HP+ IY+ L
Sbjct: 612 MEERGVK--KVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFL 652
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + I+AG + N L+ +Y K + ++R F+EM ER+V SWNT+I+ +
Sbjct: 406 HGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFG 465
Query: 73 KQARSLFD 80
K+A +FD
Sbjct: 466 KEALEIFD 473
>gi|225468012|ref|XP_002270478.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 602
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 185/570 (32%), Positives = 296/570 (51%), Gaps = 71/570 (12%)
Query: 106 DALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS 165
+AL+ F M ++ + +F + + LN C KLLN G G Q+HA +++T + + F S+
Sbjct: 84 EALESFWRMNTSG--TKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTGFEDNLFLNSA 141
Query: 166 LIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAV 225
L+D+Y+KC +A RVF+G E +D V
Sbjct: 142 LVDLYAKCDAIVDAKRVFDGM---------------------------------EKHDQV 168
Query: 226 SWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNV--KCAKEIHS 283
SW ++ISG+ +NG +E + F M + ++ N T+ S +SAC GL + +CA +H+
Sbjct: 169 SWTSIISGFSKNGRGKEAILFFKEMLGSQIKPNCVTYVSVISACTGLETIFDQCAL-LHA 227
Query: 284 WVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEE 343
V+K G FV S ++D Y KC G +++
Sbjct: 228 HVVKLGFGVKTFVVSCLIDCYSKC-------------------------------GRIDQ 256
Query: 344 ARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACA 403
A F + E++ +++ ++ SGY + E L E + G+ L +L AC
Sbjct: 257 AVLLFGTTIERDNILFNSMISGYSQNLFGEEALKLFVE-MRNNGLNPTDHTLTSILNACG 315
Query: 404 LQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNV 463
L G+++H+ + +MG + + ++S L+DMYSKCG++ A +F +E++ VL+
Sbjct: 316 SLTILQQGRQVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEARCVFDQAVEKNTVLWTS 375
Query: 464 MIACYAHHGHEEKAILLFEEML-EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTAD 522
MI YA G + + LFE ++ E+G PD + F A+L+A H G ++ G YFN M D
Sbjct: 376 MITGYAQSGRGPEGLGLFERLVTEEGFTPDHICFTAVLTACNHAGFLDKGIDYFNQMRRD 435
Query: 523 YKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGE 582
Y + P+ D YAC++DLY R L KA E M++IP E ++V+ GSFL+ C+L AEL E
Sbjct: 436 YGLVPDLDQYACLVDLYVRNGHLRKAKELMEAIPCEPNSVMWGSFLSSCKLYGEAELGRE 495
Query: 583 AEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIH 642
A +KL ++E + A YV +A++YA G W+E+ IRK M+ + AG SWV V+ +H
Sbjct: 496 AADKLFKMEPCSTAPYVAMASIYAQAGLWSEVVEIRKLMKQKGLRKSAGWSWVEVDKRVH 555
Query: 643 IFTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
+F V D SHP++ I L E+ E+
Sbjct: 556 VFLVADASHPRSRDICVELERLNLEMKEVG 585
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 137/553 (24%), Positives = 218/553 (39%), Gaps = 138/553 (24%)
Query: 4 LNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
LN + H + I+ G + L+ +Y+K + + +++++FD M + + SW +II
Sbjct: 115 LNWGLGVQIHARIIQTGFEDNLFLNSALVDLYAKCDAIVDAKRVFDGMEKHDQVSWTSII 174
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
S K N G E A+ F EM + I+
Sbjct: 175 SGFSK------------------------------NGRGKE--AILFFKEMLGS--QIKP 200
Query: 124 DEFTVTSTLNLCVKLLNVGFGR--QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+ T S ++ C L + F + LHA +VK F VS LID YSKC ++A
Sbjct: 201 NCVTYVSVISACTGLETI-FDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKCGRIDQAVL 259
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F E N++ +N++ISGY QN E
Sbjct: 260 LFGTTIERDNIL---------------------------------FNSMISGYSQNLFGE 286
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E LKLFV M NG+ +HT S L+AC L ++ +++HS V K G SN FV S ++
Sbjct: 287 EALKLFVEMRNNGLNPTDHTLTSILNACGSLTILQQGRQVHSLVAKMGSESNVFVVSALL 346
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D+Y KC +++ A + +N+ +SMI GY+ G E F+ L
Sbjct: 347 DMYSKCGSIDEARCVFDQAVEKNTVLWTSMITGYAQSGRGPEGLGLFERL---------- 396
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
VT+EG D + +L AC L G + + R
Sbjct: 397 ---------------------VTEEGFTPDHICFTAVLTACNHAGFLDKGIDYFNQMRR- 434
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
D L+ DL Y ++ Y +GH KA L
Sbjct: 435 ----DYGLVP-------------------------DLDQYACLVDLYVRNGHLRKAKELM 465
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISP-ETDHYACMIDLYG 540
E + +P++V + + LS+ + G E+G + + + +K+ P T Y M +Y
Sbjct: 466 EAI---PCEPNSVMWGSFLSSCKLYGEAELGREAADKL---FKMEPCSTAPYVAMASIYA 519
Query: 541 RANQLEKAIEFMK 553
+A + +E K
Sbjct: 520 QAGLWSEVVEIRK 532
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 157/316 (49%), Gaps = 38/316 (12%)
Query: 236 QNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF 295
++ + E L+ F RM +G + + +AL++C L N +IH+ +++ G N F
Sbjct: 78 KHANVREALESFWRMNTSGTKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTGFEDNLF 137
Query: 296 VSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKN 355
++S +VD+Y KC+ + +A+R FD + + +
Sbjct: 138 LNSALVDLYAKCD-------------------------------AIVDAKRVFDGMEKHD 166
Query: 356 VVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGAC-ALQAALHPGKEI 414
V WT++ SG+ K + E + + + + + V ++ AC L+ +
Sbjct: 167 QVSWTSIISGFSKNGRGKEAILFFKEMLGSQ-IKPNCVTYVSVISACTGLETIFDQCALL 225
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
HA+++++G + ++S L+D YSKCG + A ++F IERD +L+N MI+ Y+ +
Sbjct: 226 HAHVVKLGFGVKTFVVSCLIDCYSKCGRIDQAVLLFGTTIERDNILFNSMISGYSQNLFG 285
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY-- 532
E+A+ LF EM G+ P T +IL+A CGS+ + ++ + K+ E++ +
Sbjct: 286 EEALKLFVEMRNNGLNPTDHTLTSILNA---CGSLTILQQGRQVHSLVAKMGSESNVFVV 342
Query: 533 ACMIDLYGRANQLEKA 548
+ ++D+Y + +++A
Sbjct: 343 SALLDMYSKCGSIDEA 358
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 111/263 (42%), Gaps = 21/263 (7%)
Query: 7 KEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEM----PERNVFSWNTI 62
+EAL V+ GL T T +++ +L++ R++ + E NVF + +
Sbjct: 286 EEALKLFVEMRNNGLNPTDHTLTSILNACGSLTILQQGRQVHSLVAKMGSESNVFVVSAL 345
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
+ K + +AR +FD + K+ V + SM+ GY + G + L LF E +E
Sbjct: 346 LDMYSKCGSIDEARCVFDQAVEKNTVLWTSMITGYAQS-GRGPEGLGLF-ERLVTEEGFT 403
Query: 123 MDEFTVTSTLNLC--VKLLNVG---FGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYE 177
D T+ L C L+ G F + + + D + L+D+Y +
Sbjct: 404 PDHICFTAVLTACNHAGFLDKGIDYFNQMRRDYGLVPDLDQ----YACLVDLYVRNGHLR 459
Query: 178 EACRVFEGCTEEVNLISKNAMVAACCREGEMEM----ALKTFWRQPELNDAVSWNTLISG 233
+A + E E N + + +++C GE E+ A K F +P + + S
Sbjct: 460 KAKELMEAIPCEPNSVMWGSFLSSCKLYGEAELGREAADKLFKMEP--CSTAPYVAMASI 517
Query: 234 YVQNGDAEEGLKLFVRMGENGVR 256
Y Q G E +++ M + G+R
Sbjct: 518 YAQAGLWSEVVEIRKLMKQKGLR 540
>gi|449457225|ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Cucumis sativus]
Length = 781
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 198/616 (32%), Positives = 319/616 (51%), Gaps = 46/616 (7%)
Query: 60 NTIISACIKSH--DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSA 117
N +++ C S +L+ A +F+ L YN M+ Y G L LF +++
Sbjct: 179 NKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKMYAK-RGILRKVLLLFQQLR-- 235
Query: 118 DEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYE 177
++ + D FT L L +V G ++ F+VKT D + +SLIDMY + E
Sbjct: 236 EDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVE 295
Query: 178 EACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQN 237
A ++F+ EM + D+VSWN +ISGYV+
Sbjct: 296 NAKKLFD------------------------EMTTR---------DSVSWNVMISGYVRC 322
Query: 238 GDAEEGLKLFVRMGENG-VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKN-GLISNPF 295
E+ + F M + G + +E T S LSAC L+N++ EIH++V K G +
Sbjct: 323 RRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTR-- 380
Query: 296 VSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKN 355
+ + ++D+Y KC +N A ++ ++N +SMI GY G++ EAR FD ++
Sbjct: 381 IDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRD 440
Query: 356 VVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIH 415
VV+WTA+ +GYV+ + + L E + V D +V LL CA AL GK IH
Sbjct: 441 VVLWTAMINGYVQFHHFDDAVALFREMQIQR-VKPDKFTVVTLLTGCAQLGALEQGKWIH 499
Query: 416 AYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEE 475
Y+ + MD + + L++MYSKCG + + IF ++D + +I A +G
Sbjct: 500 GYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTS 559
Query: 476 KAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACM 535
+A+ LF EM G KPD +TF+ +LSA H G VE G ++FNSM ++I P+ +HY C+
Sbjct: 560 EALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCV 619
Query: 536 IDLYGRANQLEKAIEFMKSIPTEEDAVIL---GSFLNVCRLNRNAELAGEAEEKLLRLEG 592
IDL GRA L++A E ++ IP E +++ G+ L+ CR++ N ++ +KL +E
Sbjct: 620 IDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIES 679
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
+ + + LAN+YA+ W + ++R++M+ + + GCS + V+ +H F VGD SHP
Sbjct: 680 CDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHP 739
Query: 653 KTNAIYSVLAIFTGEL 668
+ I S+L TG+L
Sbjct: 740 EMMEICSMLNRVTGQL 755
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 131/273 (47%), Gaps = 43/273 (15%)
Query: 17 IKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQAR 76
++ L TT N L+ +Y+K L +R +FDEM +NV W ++IS I DL++AR
Sbjct: 371 VRKELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREAR 430
Query: 77 SLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCV 136
LFD SP +D+V + +M+ GY+ ++ DA+ LF EMQ + ++ D+FTV + L C
Sbjct: 431 DLFDKSPVRDVVLWTAMINGYVQFHHFD-DAVALFREMQI--QRVKPDKFTVVTLLTGCA 487
Query: 137 KLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKN 196
+L + G+ +H ++ + ++LI+MYSKC C +++ +F
Sbjct: 488 QLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIF------------- 534
Query: 197 AMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVR 256
+ E D SW ++I G NG E L+LF M G +
Sbjct: 535 --------------------YELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAK 574
Query: 257 WNEHTFASALSACC-------GLRNVKCAKEIH 282
++ TF LSAC G R K++H
Sbjct: 575 PDDITFIGVLSACSHGGLVEEGRRFFNSMKKVH 607
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 162/338 (47%), Gaps = 42/338 (12%)
Query: 17 IKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQAR 76
+K G+ L N LI +Y + + + ++KLFDEM R+ SWN +IS
Sbjct: 270 VKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMIS------------ 317
Query: 77 SLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCV 136
GY+ +E DA+ F EMQ + DE TV STL+ C
Sbjct: 318 -------------------GYVRCRRFE-DAINTFREMQQEGNE-KPDEATVVSTLSACT 356
Query: 137 KLLNVGFGRQLHAFMVKTSNDASGFAV---SSLIDMYSKCRCYEEACRVFEGCTEEVNLI 193
L N+ G ++H ++ K GF ++L+DMY+KC C A +F+ + + N+I
Sbjct: 357 ALKNLELGDEIHNYVRK----ELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMK-NVI 411
Query: 194 SKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGEN 253
+M++ G++ A F + P + D V W +I+GYVQ ++ + LF M
Sbjct: 412 CWTSMISGYINCGDLREARDLFDKSP-VRDVVLWTAMINGYVQFHHFDDAVALFREMQIQ 470
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA 313
V+ ++ T + L+ C L ++ K IH ++ +N + + V + ++++Y KC ++ +
Sbjct: 471 RVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKS 530
Query: 314 ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL 351
+ +++ S +S+I G ++ G EA R F +
Sbjct: 531 LEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEM 568
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 114/231 (49%), Gaps = 4/231 (1%)
Query: 319 LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDL 378
L+G R++ + S GN+ A + F+ + + ++ V+ + Y K + L
Sbjct: 171 LEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKMYAKRGILRKVL-L 229
Query: 379 LSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYS 438
L + + ++G+ D +L A + G+++ +I++ G+ +D + ++L+DMY
Sbjct: 230 LFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYY 289
Query: 439 KCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI-KPDAVTFV 497
+ N+ A+ +F RD V +NVMI+ Y E AI F EM ++G KPD T V
Sbjct: 290 ELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVV 349
Query: 498 AILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
+ LSA ++E+G++ N + + + D+ ++D+Y + L A
Sbjct: 350 STLSACTALKNLELGDEIHNYVRKELGFTTRIDN--ALLDMYAKCGCLNIA 398
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 91/187 (48%), Gaps = 16/187 (8%)
Query: 412 KEIHAYILRMGVQMDKKLISTLVDM--YSKCGNMTYAEIIFQNFIERDLVLYNVMIACYA 469
K+I + I R+G++ D+ I+ L+ S GN+ YAE IF + L +YNVM+ YA
Sbjct: 160 KQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKMYA 219
Query: 470 HHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPET 529
G K +LLF+++ E G+ PD T+ +L A V GEK + K +
Sbjct: 220 KRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIV---KTGMDL 276
Query: 530 DHYA--CMIDLYGRANQLEKAIEFMKSIPTEEDA---VILGSFLNVCR-----LNRNAEL 579
D+Y +ID+Y + +E A + + T + V++ ++ CR +N E+
Sbjct: 277 DNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVR-CRRFEDAINTFREM 335
Query: 580 AGEAEEK 586
E EK
Sbjct: 336 QQEGNEK 342
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 208/666 (31%), Positives = 324/666 (48%), Gaps = 72/666 (10%)
Query: 21 LTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFD 80
L I +N+ I + + + ++ +LF MP R+ ++N +++ + L A SLF
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 81 SSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLN 140
+ P D +YN++L + ADA LF EM D + T N+ +
Sbjct: 94 AIPRPDNYSYNTLLHA-LAVSSSLADARGLFDEMPVRD----------SVTYNVMI---- 138
Query: 141 VGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVA 200
S A L+ + R + E + +S N M+A
Sbjct: 139 ------------------SSHANHGLVSL----------ARHYFDLAPEKDAVSWNGMLA 170
Query: 201 ACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM-GENGVRWN- 258
A R G +E A F + E DA+SWN L+SGYVQ G E +LF RM G + V WN
Sbjct: 171 AYVRNGRVEEARGLFNSRTEW-DAISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNI 229
Query: 259 ---------EHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS------------NPFVS 297
+ A L +R+V + S +NG++ N
Sbjct: 230 MVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSW 289
Query: 298 SGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVV 357
+ +V Y + M+ A+ + + RN S ++M+ GY+ G +EEA+ FD++ +K+ V
Sbjct: 290 NAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAV 349
Query: 358 VWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
W A+ + Y + E L E + + G + +L CA AAL G ++H
Sbjct: 350 SWAAMLAAYSQGGCSEETLQLFIE-MGRCGEWVNRSAFACVLSTCADIAALECGMQLHGR 408
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
++R G + + + L+ MY KCGNM A F+ ERD+V +N MIA YA HG ++A
Sbjct: 409 LIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEA 468
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID 537
+ +F+ M KPD +T V +L+A H G VE G YF SM D+ ++ + +HY CMID
Sbjct: 469 LEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMID 528
Query: 538 LYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKAR 597
L GRA +L +A + MK +P E D+ + G+ L R++RN EL A EK+ LE N
Sbjct: 529 LLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGM 588
Query: 598 YVQLANVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTN 655
YV L+N+YA+ G W + ++R M RG+K + G SW+ V++++H F+ GD HP+
Sbjct: 589 YVLLSNIYASSGKWRDARKMRVMMEERGVK--KVPGFSWIEVQNKVHTFSAGDCVHPEKE 646
Query: 656 AIYSVL 661
IY+ L
Sbjct: 647 KIYAFL 652
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + I+AG + N L+ +Y K + ++R F+EM ER+V SWNT+I+ +
Sbjct: 406 HGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFG 465
Query: 73 KQARSLFD 80
K+A +FD
Sbjct: 466 KEALEIFD 473
>gi|449521645|ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like, partial [Cucumis sativus]
Length = 735
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 197/616 (31%), Positives = 320/616 (51%), Gaps = 46/616 (7%)
Query: 60 NTIISACIKSH--DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSA 117
N +++ C S +L+ A +F+ L YN M+ Y G L LF +++
Sbjct: 133 NKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKIYAK-RGILRKVLLLFQQLR-- 189
Query: 118 DEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYE 177
++ + D FT L L +V G ++ F+VKT D + +SLIDMY + E
Sbjct: 190 EDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVE 249
Query: 178 EACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQN 237
A ++F+ EM + D+VSWN +ISGYV+
Sbjct: 250 NAKKLFD------------------------EMTTR---------DSVSWNVMISGYVRC 276
Query: 238 GDAEEGLKLFVRMGENG-VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKN-GLISNPF 295
E+ + F M + G + +E T S LSAC L+N++ EIH++V K G +
Sbjct: 277 RRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTR-- 334
Query: 296 VSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKN 355
+ + ++D+Y KC +N A ++ ++N +SMI GY G++ EAR FD ++
Sbjct: 335 IDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRD 394
Query: 356 VVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIH 415
VV+WTA+ +GYV+ + + L E ++ + D +V LL CA AL GK IH
Sbjct: 395 VVLWTAMINGYVQFHHFDDAVALFREMQIQK-IKPDKFTVVTLLTGCAQLGALEQGKWIH 453
Query: 416 AYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEE 475
Y+ + MD + + L++MYSKCG + + IF ++D + +I A +G
Sbjct: 454 GYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTS 513
Query: 476 KAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACM 535
+A+ LF EM G KPD +TF+ +LSA H G VE G ++FNSM ++I P+ +HY C+
Sbjct: 514 EALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCV 573
Query: 536 IDLYGRANQLEKAIEFMKSIPTEEDAVIL---GSFLNVCRLNRNAELAGEAEEKLLRLEG 592
IDL GRA L++A E ++ IP E +++ G+ L+ CR++ N ++ +KL +E
Sbjct: 574 IDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIES 633
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
+ + + LAN+YA+ W + ++R++M+ + + GCS + V+ +H F VGD SHP
Sbjct: 634 CDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHP 693
Query: 653 KTNAIYSVLAIFTGEL 668
+ I S+L TG+L
Sbjct: 694 EMIEICSMLNRVTGQL 709
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 131/273 (47%), Gaps = 43/273 (15%)
Query: 17 IKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQAR 76
++ L TT N L+ +Y+K L +R +FDEM +NV W ++IS I DL++AR
Sbjct: 325 VRKELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREAR 384
Query: 77 SLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCV 136
LFD SP +D+V + +M+ GY+ ++ DA+ LF EMQ + I+ D+FTV + L C
Sbjct: 385 DLFDKSPVRDVVLWTAMINGYVQFHHFD-DAVALFREMQI--QKIKPDKFTVVTLLTGCA 441
Query: 137 KLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKN 196
+L + G+ +H ++ + ++LI+MYSKC C +++ +F
Sbjct: 442 QLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIF------------- 488
Query: 197 AMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVR 256
+ E D SW ++I G NG E L+LF M G +
Sbjct: 489 --------------------YELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAK 528
Query: 257 WNEHTFASALSACC-------GLRNVKCAKEIH 282
++ TF LSAC G R K++H
Sbjct: 529 PDDITFIGVLSACSHGGLVEEGRRFFNSMKKVH 561
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 162/338 (47%), Gaps = 42/338 (12%)
Query: 17 IKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQAR 76
+K G+ L N LI +Y + + + ++KLFDEM R+ SWN +IS
Sbjct: 224 VKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMIS------------ 271
Query: 77 SLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCV 136
GY+ +E DA+ F EMQ + DE TV STL+ C
Sbjct: 272 -------------------GYVRCRRFE-DAINTFREMQQEGNE-KPDEATVVSTLSACT 310
Query: 137 KLLNVGFGRQLHAFMVKTSNDASGFAV---SSLIDMYSKCRCYEEACRVFEGCTEEVNLI 193
L N+ G ++H ++ K GF ++L+DMY+KC C A +F+ + + N+I
Sbjct: 311 ALKNLELGDEIHNYVRK----ELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMK-NVI 365
Query: 194 SKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGEN 253
+M++ G++ A F + P + D V W +I+GYVQ ++ + LF M
Sbjct: 366 CWTSMISGYINCGDLREARDLFDKSP-VRDVVLWTAMINGYVQFHHFDDAVALFREMQIQ 424
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA 313
++ ++ T + L+ C L ++ K IH ++ +N + + V + ++++Y KC ++ +
Sbjct: 425 KIKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKS 484
Query: 314 ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL 351
+ +++ S +S+I G ++ G EA R F +
Sbjct: 485 LEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEM 522
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 114/231 (49%), Gaps = 4/231 (1%)
Query: 319 LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDL 378
L+G R++ + S GN+ A + F+ + + ++ V+ + Y K + L
Sbjct: 125 LEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKIYAKRGILRKVL-L 183
Query: 379 LSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYS 438
L + + ++G+ D +L A + G+++ +I++ G+ +D + ++L+DMY
Sbjct: 184 LFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYY 243
Query: 439 KCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI-KPDAVTFV 497
+ N+ A+ +F RD V +NVMI+ Y E AI F EM ++G KPD T V
Sbjct: 244 ELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVV 303
Query: 498 AILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
+ LSA ++E+G++ N + + + D+ ++D+Y + L A
Sbjct: 304 STLSACTALKNLELGDEIHNYVRKELGFTTRIDN--ALLDMYAKCGCLNIA 352
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 91/187 (48%), Gaps = 16/187 (8%)
Query: 412 KEIHAYILRMGVQMDKKLISTLVDM--YSKCGNMTYAEIIFQNFIERDLVLYNVMIACYA 469
K+I + I R+G++ D+ I+ L+ S GN+ YAE IF + L +YNVM+ YA
Sbjct: 114 KQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKIYA 173
Query: 470 HHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPET 529
G K +LLF+++ E G+ PD T+ +L A V GEK + K +
Sbjct: 174 KRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIV---KTGMDL 230
Query: 530 DHYA--CMIDLYGRANQLEKAIEFMKSIPTEEDA---VILGSFLNVCR-----LNRNAEL 579
D+Y +ID+Y + +E A + + T + V++ ++ CR +N E+
Sbjct: 231 DNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVR-CRRFEDAINTFREM 289
Query: 580 AGEAEEK 586
E EK
Sbjct: 290 QQEGNEK 296
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 201/659 (30%), Positives = 330/659 (50%), Gaps = 86/659 (13%)
Query: 20 GLTLTTITTNQLIHIYSKHNLLRESRKLFDEM----PERNVFSWNTIISACIKSHDLKQA 75
G ++ + TT ++ + ++ L R+L + E N+ N ++ + + A
Sbjct: 260 GFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNI-QCNALLVMYARCGWVDSA 318
Query: 76 RSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLC 135
+F KD +++NSML Y+ Y A+A+ F EM D + S L+
Sbjct: 319 LRVFREIGDKDYISWNSMLSCYVQNRLY-AEAIDFFGEM--VQNGFNPDHACIVSLLSAV 375
Query: 136 VKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISK 195
L + GR++HA+ VK D+ ++L+DMY KC E + RVF+
Sbjct: 376 GHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFD----------- 424
Query: 196 NAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGV 255
+ + D VSW T+I+ Y Q+ E + F + G+
Sbjct: 425 ----------------------RMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGI 462
Query: 256 RWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAES 315
+ + S L AC GL+++ K++HS+ ++NGL+ + + + I+D+Y +C + YA +
Sbjct: 463 KVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGLL-DLILKNRIIDIYGECGEVCYALN 521
Query: 316 MLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEAL 375
+ F+ L +K++V WT++ NC A
Sbjct: 522 I-------------------------------FEMLDKKDIVTWTSMV-------NCFAE 543
Query: 376 FDLLSEFVT------KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
LL E V G+ D++ LV +LGA A ++L GKEIH +++R ++ +
Sbjct: 544 NGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAV 603
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+S+LVDMYS CG+M YA +F +D+VL+ MI HGH ++AI +F+ MLE G+
Sbjct: 604 VSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGV 663
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
PD V+F+A+L A H V+ G+ Y + M + YK+ P +HYAC++DL GR+ Q E+A
Sbjct: 664 SPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAY 723
Query: 550 EFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEG 609
+F+KS+P E +V+ + L CR+++N ELA A +KLL LE +N YV ++NV+A G
Sbjct: 724 KFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFAEMG 783
Query: 610 NWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
W + IR +M + CSW+ + + +H FT D SH + AI+ LA T +L
Sbjct: 784 KWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAIHLKLAEITEKL 842
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 145/571 (25%), Positives = 262/571 (45%), Gaps = 108/571 (18%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPE-RNVFSWNTIISACIKSHD 71
H A+K+GL +T+ N L+ +Y+K LL + ++F+ M + R+V SWN+ IS C+++
Sbjct: 186 HGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQN-- 243
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
G +AL LF MQS + M+ +T
Sbjct: 244 ------------------------------GMFLEALDLFRRMQS--DGFSMNSYTTVGV 271
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L +C +L + GR+LHA ++K + + ++L+ MY++C + A RVF
Sbjct: 272 LQVCAELAQLNHGRELHAALLKCGTEFN-IQCNALLVMYARCGWVDSALRVF-------- 322
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
R+ D +SWN+++S YVQN E + F M
Sbjct: 323 -------------------------REIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMV 357
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
+NG + S LSA L + +E+H++ +K L S+ +++ ++D+Y KC
Sbjct: 358 QNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKC---- 413
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
YS+ E + R FD + K+ V WT + + Y ++
Sbjct: 414 -----------------------YSV----ECSARVFDRMRIKDHVSWTTIIACYAQSSR 446
Query: 372 CEALFDLLSEFVT--KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
+ + +F T KEG+ D +++ +L AC+ ++ K++H+Y +R G+ +D L
Sbjct: 447 YS---EAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGL-LDLIL 502
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+ ++D+Y +CG + YA IF+ ++D+V + M+ C+A +G +A+ LF +ML GI
Sbjct: 503 KNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGI 562
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
+PD+V V IL A S+ G K + K E + ++D+Y + A+
Sbjct: 563 QPDSVALVGILGAIAGLSSLTKG-KEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYAL 621
Query: 550 EFMKSIPTEEDAVILGSFLNVCRLNRNAELA 580
+ +D V+ + +N ++ + + A
Sbjct: 622 KVFDEAKC-KDVVLWTAMINATGMHGHGKQA 651
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/477 (25%), Positives = 199/477 (41%), Gaps = 99/477 (20%)
Query: 28 TNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDL 87
+L+ +Y K L ++ +LFD MP R VFSWN +I AC+ S
Sbjct: 96 ATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSS------------------ 137
Query: 88 VTYNSMLCGYINAEGYEADALKLFIEMQSADE--HIRMDEFTVTSTLNLCVKLLNVGFGR 145
G +A+ ++ M++++ D T+ S L C + G
Sbjct: 138 --------------GGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGS 183
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
++H VK+ D S ++L+ MY+KC + A RVFE + ++ S N+ ++ C
Sbjct: 184 EVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGC--- 240
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASA 265
VQNG E L LF RM +G N +T
Sbjct: 241 -----------------------------VQNGMFLEALDLFRRMQSDGFSMNSYTTVGV 271
Query: 266 LSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNS 325
L C L + +E+H+ +LK G N + C
Sbjct: 272 LQVCAELAQLNHGRELHAALLKCGTEFN---------IQC-------------------- 302
Query: 326 FSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTK 385
++++V Y+ G ++ A R F + +K+ + W ++ S YV+ + D E V +
Sbjct: 303 ---NALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMV-Q 358
Query: 386 EGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTY 445
G D +V LL A L G+E+HAY ++ + D ++ +TL+DMY KC ++
Sbjct: 359 NGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVEC 418
Query: 446 AEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
+ +F +D V + +IACYA +AI F ++GIK D + +IL A
Sbjct: 419 SARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEA 475
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 119/487 (24%), Positives = 201/487 (41%), Gaps = 117/487 (24%)
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTS---NDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
L+L V GRQLHA V T +D +GF + L+ MY KC +A R+F+G
Sbjct: 61 VLDLVAVRRAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDG-- 118
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
M +T + SWN LI + +G A E + ++
Sbjct: 119 ----------------------MPARTVF---------SWNALIGACLSSGGAGEAVGVY 147
Query: 248 VRMGEN----GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
M + G + T AS L AC + +C E+H +K+GL + V++ +V +
Sbjct: 148 RAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGM 207
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE-KNVVVWTAL 362
Y KC G ++ A R F+ + + ++V W +
Sbjct: 208 YAKC-------------------------------GLLDSALRVFEWMRDGRDVASWNSA 236
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
SG V+ DL + +G ++ V +L CA A L+ G+E+HA +L+ G
Sbjct: 237 ISGCVQNGMFLEALDLFRR-MQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCG 295
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
+ + + + LV MY++CG + A +F+ ++D + +N M++CY + +AI F
Sbjct: 296 TEFNIQCNALLV-MYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFG 354
Query: 483 EMLEKGIKPDAVTFVAILSAFRH-----------------------------------CG 507
EM++ G PD V++LSA H C
Sbjct: 355 EMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCY 414
Query: 508 SVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE---DAVIL 564
SVE + F+ M +S + +I Y ++++ +AI ++ E D +++
Sbjct: 415 SVECSARVFDRMRIKDHVS-----WTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMM 469
Query: 565 GSFLNVC 571
GS L C
Sbjct: 470 GSILEAC 476
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 104/255 (40%), Gaps = 9/255 (3%)
Query: 326 FSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTK 385
F + ++ Y G + +A R FD + + V W AL + + +
Sbjct: 94 FLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRAS 153
Query: 386 E---GVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGN 442
E G D L +L AC + G E+H ++ G+ + + LV MY+KCG
Sbjct: 154 EPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGL 213
Query: 443 MTYAEIIFQNFIE-RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
+ A +F+ + RD+ +N I+ +G +A+ LF M G ++ T V +L
Sbjct: 214 LDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQ 273
Query: 502 AFRHCGSVEMGEKYFNSMTADYKISPETD-HYACMIDLYGRANQLEKAIEFMKSIPTEED 560
+ G + ++ K E + ++ +Y R ++ A+ + I ++D
Sbjct: 274 VCAELAQLNHGRELHAAL---LKCGTEFNIQCNALLVMYARCGWVDSALRVFREI-GDKD 329
Query: 561 AVILGSFLNVCRLNR 575
+ S L+ NR
Sbjct: 330 YISWNSMLSCYVQNR 344
>gi|147818972|emb|CAN67116.1| hypothetical protein VITISV_026465 [Vitis vinifera]
Length = 1817
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 183/570 (32%), Positives = 295/570 (51%), Gaps = 71/570 (12%)
Query: 106 DALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS 165
+AL+ F M ++ + +F + + LN C KLLN G G Q+HA +++T + + F S+
Sbjct: 1299 EALESFXRMNTSG--TKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTGFEDNLFLNSA 1356
Query: 166 LIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAV 225
L+D+Y+KC +A RVF+G E +D V
Sbjct: 1357 LVDLYAKCDAIVDAKRVFDGM---------------------------------EKHDQV 1383
Query: 226 SWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNV--KCAKEIHS 283
SW ++ISG+ +NG +E + F M + ++ N T+ S +SAC GL + +CA +H+
Sbjct: 1384 SWTSIISGFSKNGRGKEAILFFKEMLGSQIKPNCVTYVSXISACTGLETIFDQCAL-LHA 1442
Query: 284 WVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEE 343
V+K G FV S ++D Y KC G +++
Sbjct: 1443 HVVKLGFGVKTFVVSCLIDCYSKC-------------------------------GRIDQ 1471
Query: 344 ARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACA 403
A F + E++ +++ ++ SGY + E L Z + G+ L +L AC
Sbjct: 1472 AVLLFGTTIERDNILFNSMISGYSQNLXGEEALKLFVZ-MRNNGLXPTDHTLTSILNACG 1530
Query: 404 LQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNV 463
L G+++H+ + +MG + + ++S L+DMYSKCG++ A +F +E++ VL+
Sbjct: 1531 SLTILQQGRQVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEARCVFXQAVEKNTVLWTS 1590
Query: 464 MIACYAHHGHEEKAILLFEEML-EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTAD 522
MI YA G + + LFE ++ E+G PD + F A+L+A H G ++ G YFN M D
Sbjct: 1591 MITGYAQSGRGPEGLGLFERLVXEEGFTPDHICFTAVLTACNHAGFLDKGIDYFNQMRRD 1650
Query: 523 YKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGE 582
Y + P+ D YAC++DLY R L KA E M++ P E ++V+ GSFL+ C+L AEL E
Sbjct: 1651 YGLVPDLDQYACLVDLYVRNGHLRKAKELMEAXPXEPNSVMWGSFLSSCKLYGEAELGRE 1710
Query: 583 AEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIH 642
A +KL ++E + A YV +A++YA G W+E+ IRK M+ + AG SWV V+ +H
Sbjct: 1711 AADKLFKMEPCSTAPYVAMASIYAQAGLWSEVVEIRKLMKQKGLRKSAGWSWVEVDKRVH 1770
Query: 643 IFTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
+F V D SHP++ I L E+ E+
Sbjct: 1771 VFXVADASHPRSRDICVELERLNLEMKEVG 1800
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 135/554 (24%), Positives = 217/554 (39%), Gaps = 140/554 (25%)
Query: 4 LNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
LN + H + I+ G + L+ +Y+K + + +++++FD M + + SW +II
Sbjct: 1330 LNWGLGVQIHARIIQTGFEDNLFLNSALVDLYAKCDAIVDAKRVFDGMEKHDQVSWTSII 1389
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
S K N G E A+ F EM + I+
Sbjct: 1390 SGFSK------------------------------NGRGKE--AILFFKEMLGS--QIKP 1415
Query: 124 DEFTVTSTLNLCVKLLNVGFGR--QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+ T S ++ C L + F + LHA +VK F VS LID YSKC ++A
Sbjct: 1416 NCVTYVSXISACTGLETI-FDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKCGRIDQAVL 1474
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F E N++ +N++ISGY QN E
Sbjct: 1475 LFGTTIERDNIL---------------------------------FNSMISGYSQNLXGE 1501
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E LKLFV M NG+ +HT S L+AC L ++ +++HS V K G SN FV S ++
Sbjct: 1502 EALKLFVZMRNNGLXPTDHTLTSILNACGSLTILQQGRQVHSLVAKMGSESNVFVVSALL 1561
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D+Y KC +++ A + +N+ +SMI GY+ G E
Sbjct: 1562 DMYSKCGSIDEARCVFXQAVEKNTVLWTSMITGYAQSGRGPEG----------------- 1604
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
L V +EG D + +L AC HA L
Sbjct: 1605 --------------LGLFERLVXEEGFTPDHICFTAVLTACN-----------HAGFLDK 1639
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKAILL 480
G+ Y + +++ + DL Y ++ Y +GH KA L
Sbjct: 1640 GID--------------------YFNQMRRDYGLVPDLDQYACLVDLYVRNGHLRKAKEL 1679
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISP-ETDHYACMIDLY 539
E +P++V + + LS+ + G E+G + + + +K+ P T Y M +Y
Sbjct: 1680 MEAX---PXEPNSVMWGSFLSSCKLYGEAELGREAADKL---FKMEPCSTAPYVAMASIY 1733
Query: 540 GRANQLEKAIEFMK 553
+A + +E K
Sbjct: 1734 AQAGLWSEVVEIRK 1747
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 157/316 (49%), Gaps = 38/316 (12%)
Query: 236 QNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF 295
++ + E L+ F RM +G + + +AL++C L N +IH+ +++ G N F
Sbjct: 1293 KHANVREALESFXRMNTSGTKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTGFEDNLF 1352
Query: 296 VSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKN 355
++S +VD+Y KC+ IV +A+R FD + + +
Sbjct: 1353 LNSALVDLYAKCD----------------------AIV---------DAKRVFDGMEKHD 1381
Query: 356 VVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGAC-ALQAALHPGKEI 414
V WT++ SG+ K + E + + + + + V + AC L+ +
Sbjct: 1382 QVSWTSIISGFSKNGRGKEAILFFKEMLGSQ-IKPNCVTYVSXISACTGLETIFDQCALL 1440
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
HA+++++G + ++S L+D YSKCG + A ++F IERD +L+N MI+ Y+ +
Sbjct: 1441 HAHVVKLGFGVKTFVVSCLIDCYSKCGRIDQAVLLFGTTIERDNILFNSMISGYSQNLXG 1500
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY-- 532
E+A+ LF ZM G+ P T +IL+A CGS+ + ++ + K+ E++ +
Sbjct: 1501 EEALKLFVZMRNNGLXPTDHTLTSILNA---CGSLTILQQGRQVHSLVAKMGSESNVFVV 1557
Query: 533 ACMIDLYGRANQLEKA 548
+ ++D+Y + +++A
Sbjct: 1558 SALLDMYSKCGSIDEA 1573
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 113/268 (42%), Gaps = 21/268 (7%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEM----PERNVF 57
++L +EAL VZ GL T T +++ +L++ R++ + E NVF
Sbjct: 1496 QNLXGEEALKLFVZMRNNGLXPTDHTLTSILNACGSLTILQQGRQVHSLVAKMGSESNVF 1555
Query: 58 SWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSA 117
+ ++ K + +AR +F + K+ V + SM+ GY + G + L LF E
Sbjct: 1556 VVSALLDMYSKCGSIDEARCVFXQAVEKNTVLWTSMITGYAQS-GRGPEGLGLF-ERLVX 1613
Query: 118 DEHIRMDEFTVTSTLNLC--VKLLNVG---FGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
+E D T+ L C L+ G F + + + D + L+D+Y +
Sbjct: 1614 EEGFTPDHICFTAVLTACNHAGFLDKGIDYFNQMRRDYGLVPDLDQ----YACLVDLYVR 1669
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEM----ALKTFWRQPELNDAVSWN 228
+A + E E N + + +++C GE E+ A K F +P +
Sbjct: 1670 NGHLRKAKELMEAXPXEPNSVMWGSFLSSCKLYGEAELGREAADKLFKMEP--CSTAPYV 1727
Query: 229 TLISGYVQNGDAEEGLKLFVRMGENGVR 256
+ S Y Q G E +++ M + G+R
Sbjct: 1728 AMASIYAQAGLWSEVVEIRKLMKQKGLR 1755
>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 201/656 (30%), Positives = 323/656 (49%), Gaps = 68/656 (10%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
+ + E + H +K GL N LIH Y+ + RK+FDEM ERNV
Sbjct: 134 KIMAFSEGVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNV----- 188
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
V++ S++ GY + +A+ LF EM + +
Sbjct: 189 --------------------------VSWTSLINGY-SVVNMAKEAVCLFFEM--VEVGV 219
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+ T+ ++ C KL ++ G+++ M + ++ V++L+DMY KC
Sbjct: 220 EPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKC-------- 271
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
G+M A++ + + + V +NT++S YVQ+G A
Sbjct: 272 ------------------------GDM-YAVREIFDEFSDKNLVMYNTIMSNYVQHGLAG 306
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E L + M + G R ++ T S ++AC L ++ K H++V +NGL +S+ I+
Sbjct: 307 EVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAII 366
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D+Y KC A + + + +S+I G G +E A R F + E N+V W
Sbjct: 367 DMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNT 426
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+ V+A E DLL E + +G+ D + +V + AC AL K I+ YI +
Sbjct: 427 MIGAMVQASMFEEAIDLLRE-MQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKN 485
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
+ +D +L + LVDM+S+CG+ A +F+N +RD+ + I A G+ + AI LF
Sbjct: 486 DIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELF 545
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGR 541
+EML++ +K D FVA+L+AF H G V+ G + F +M + +SP+ HY CM+DL GR
Sbjct: 546 DEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGR 605
Query: 542 ANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQL 601
A LE+A + MKS+P + + VI GSFL CR ++N E A A+EK+ +L +V L
Sbjct: 606 AGLLEEAFDLMKSMPIKPNDVIWGSFLAACRKHKNVEFANYADEKITQLAPEKVGIHVLL 665
Query: 602 ANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
+N+YA+ G W ++ R+R QM+ + AG S + V I FT GD SH + I
Sbjct: 666 SNIYASAGKWNDVARVRLQMKEKGFQKVAGSSSIEVHGLIREFTSGDESHTENAQI 721
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 113/235 (48%), Gaps = 11/235 (4%)
Query: 317 LLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK-----NVVVWTALFSGYVKAQN 371
+L KGV F+I+ +I G E ++ E ++ L GY +
Sbjct: 45 MLKKGV---FNINKLIAACVQMGTHESLNYALNAFKEDEGTKCSLYTCNTLIRGYAASGL 101
Query: 372 C-EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
C EA+F L + G+V D LL AC+ A G ++H +++MG+ D +
Sbjct: 102 CKEAIFIYLHMIIVM-GIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVVKMGLVKDLFVA 160
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
++L+ Y+ CG + +F +ER++V + +I Y+ ++A+ LF EM+E G++
Sbjct: 161 NSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVE 220
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQL 545
P+ VT V +SA +E+G+K N MT + + T ++D+Y + +
Sbjct: 221 PNPVTMVCAISACAKLKDLELGKKVCNLMT-ELGVKSNTLVVNALLDMYMKCGDM 274
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 194/655 (29%), Positives = 334/655 (50%), Gaps = 68/655 (10%)
Query: 25 TITTNQLIHIYSKHNLLRESRKLFDE--MPERNVFSWNTIISACIKSHDLKQARSLFDSS 82
T +++ I Y+++ L +RK+FDE +P R V SWN +++A ++ ++A LF+
Sbjct: 22 TTSSSYAIACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKM 81
Query: 83 PHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVG 142
P ++ V++N ++ G+I G ++A ++F M D ++ + TS + V+ +V
Sbjct: 82 PQRNTVSWNGLISGHIK-NGMLSEARRVFDTM--PDRNV----VSWTSMVRGYVRNGDVA 134
Query: 143 FGRQL-----HAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNA 197
+L H +V + G +D +A ++F+ E+ ++++
Sbjct: 135 EAERLFWHMPHKNVVSWTVMLGGLLQEGRVD---------DARKLFDMMPEK-DVVAVTN 184
Query: 198 MVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRW 257
M+ C EG ++ A F P+ N V+W ++SGY +NG + KLF M E
Sbjct: 185 MIGGYCEEGRLDEARALFDEMPKRN-VVTWTAMVSGYARNGKVDVARKLFEVMPER---- 239
Query: 258 NEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESML 317
NE ++ + L Y M A S+
Sbjct: 240 NEVSWTAMLLG-----------------------------------YTHSGRMREASSLF 264
Query: 318 LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY-VKAQNCEALF 376
V+ + MI+G+ L G +++ARR F + E++ W+A+ Y K EAL
Sbjct: 265 DAMPVKPVVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALG 324
Query: 377 DLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDM 436
L + +EG+ + L+ +L C A+L GK++HA ++R D + S L+ M
Sbjct: 325 --LFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITM 382
Query: 437 YSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTF 496
Y KCGN+ A+ +F F +D+V++N MI Y+ HG E+A+ +F +M G+ PD VTF
Sbjct: 383 YVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTF 442
Query: 497 VAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIP 556
+ +LSA + G V+ G + F +M Y++ P +HYAC++DL GRA+Q+ +A++ ++ +P
Sbjct: 443 IGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMP 502
Query: 557 TEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGR 616
E DA++ G+ L CR + +LA A EKL +LE N YV L+N+YA +G W ++
Sbjct: 503 MEPDAIVWGALLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSNMYAYKGRWRDVEV 562
Query: 617 IRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDV-SHPKTNAIYSVLAIFTGELYE 670
+R++++ + GCSW+ VE ++H+FT GD HP+ I +L G L E
Sbjct: 563 LREKIKARSVTKLPGCSWIEVEKKVHMFTGGDSKGHPEQPIIMKMLEKLGGLLRE 617
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 120/482 (24%), Positives = 222/482 (46%), Gaps = 50/482 (10%)
Query: 24 TTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP 83
T + N ++ Y + RE+ LF++MP+RN SWN +IS IK+ L +AR +FD+ P
Sbjct: 54 TVSSWNAMVAAYFEARQPREALLLFEKMPQRNTVSWNGLISGHIKNGMLSEARRVFDTMP 113
Query: 84 HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGF 143
+++V++ SM+ GY+ G A+A +LF M H + +TV L ++ V
Sbjct: 114 DRNVVSWTSMVRGYVR-NGDVAEAERLFWHMP----HKNVVSWTV--MLGGLLQEGRVDD 166
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
R+L M + AV+++I Y + +EA +F+ + N+++ AMV+
Sbjct: 167 ARKLFDMM----PEKDVVAVTNMIGGYCEEGRLDEARALFDEMPKR-NVVTWTAMVSGYA 221
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG-ENGVRWNEHTF 262
R G++++A K F PE N+ VSW ++ GY +G E LF M + V NE
Sbjct: 222 RNGKVDVARKLFEVMPERNE-VSWTAMLLGYTHSGRMREASSLFDAMPVKPVVVCNEMIM 280
Query: 263 ASALSACC--GLRNVKCAKEIH--SW----------------------VLKNGLISNPFV 296
L+ R K KE +W + + GL N
Sbjct: 281 GFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPS 340
Query: 297 SSGIVDVYCKCENMNYAESMLLLKGVRNSFS-----ISSMIVGYSLQGNMEEARRHFDSL 351
++ V ++++ + + + VR+ F S +I Y GN+ A++ F+
Sbjct: 341 LISVLSVCVSLASLDHGKQ-VHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRF 399
Query: 352 TEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG 411
K+VV+W ++ +GY + E ++ + + GV D + + +L AC+ + G
Sbjct: 400 PLKDVVMWNSMITGYSQHGLGEEALNVFHDMCS-SGVPPDDVTFIGVLSACSYSGKVKEG 458
Query: 412 KEIHAYI-LRMGVQMDKKLISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMI-ACY 468
E+ + + V+ + + LVD+ + + A +++ + +E D +++ ++ AC
Sbjct: 459 LELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGACR 518
Query: 469 AH 470
H
Sbjct: 519 TH 520
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/289 (20%), Positives = 116/289 (40%), Gaps = 51/289 (17%)
Query: 316 MLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFD--SLTEKNVVVWTALFSGYVKAQNCE 373
M+L ++ + S S I Y+ G ++ AR+ FD L + V W A+ + Y +A+
Sbjct: 13 MMLQVRLQCTTSSSYAIACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPR 72
Query: 374 ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS-- 431
L + + V + LI L + + D+ ++S
Sbjct: 73 EALLLFEKMPQRNTVSWNGLI-----SGHIKNGMLSEARRV------FDTMPDRNVVSWT 121
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI-- 489
++V Y + G++ AE +F + +++V + VM+ G + A LF+ M EK +
Sbjct: 122 SMVRGYVRNGDVAEAERLFWHMPHKNVVSWTVMLGGLLQEGRVDDARKLFDMMPEKDVVA 181
Query: 490 -------------------------KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYK 524
K + VT+ A++S + G V++ K F M +
Sbjct: 182 VTNMIGGYCEEGRLDEARALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMPERNE 241
Query: 525 ISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE----DAVILGSFLN 569
+S + M+ Y + ++ +A ++P + + +I+G LN
Sbjct: 242 VS-----WTAMLLGYTHSGRMREASSLFDAMPVKPVVVCNEMIMGFGLN 285
>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
Length = 732
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 202/666 (30%), Positives = 328/666 (49%), Gaps = 107/666 (16%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H ++ G + N LI Y+K N ++ RKLFD+M +N+ SW T+IS
Sbjct: 161 HAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMIS-------- 212
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
GY+ ++ +A+KLF EM + D F TS L
Sbjct: 213 -----------------------GYMQ-NSFDWEAMKLFGEMNRLG--WKPDGFACTSVL 246
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C L + GRQ+HA+ +K + +++ F + LIDMY+K +A +VF+ E+ N+
Sbjct: 247 TSCGSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQ-NV 305
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
IS NAM I GY E L+LF M
Sbjct: 306 ISYNAM--------------------------------IEGYSSQEKLSEALELFHEMRV 333
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+ TF S L L ++ +K+IH ++K G+ + F S ++DVY KC
Sbjct: 334 RLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKC----- 388
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
+++AR F+ + EK++VVW A+F GY +
Sbjct: 389 --------------------------SYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLEN 422
Query: 373 EALFDLLS--EFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
E L S +F ++ + L+ A + A+L G++ H +++MG+ +
Sbjct: 423 EEALKLYSTLQFSRQK---PNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVT 479
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+ LVDMY+KCG++ A +F + I RD+V +N MI+ +A HG E+A+ +F EM+++GI+
Sbjct: 480 NALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQ 539
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
P+ VTFVA+LSA H G VE G +FNSM + I P T+HYAC++ L GR+ +L +A E
Sbjct: 540 PNYVTFVAVLSACSHAGXVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSGKLFEAKE 598
Query: 551 FMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGN 610
F++ +P E A++ S L+ CR+ N EL A E + + + Y+ L+N++A++G
Sbjct: 599 FIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGM 658
Query: 611 WAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYE 670
WA++ ++R +M + + G SW+ V +++++F +H + + I SVL I +
Sbjct: 659 WADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARXTTHREADMIGSVLDIL---IQH 715
Query: 671 IAGAFY 676
I GA Y
Sbjct: 716 IKGAGY 721
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 142/538 (26%), Positives = 251/538 (46%), Gaps = 82/538 (15%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
+++V+ ++I K+ B++ AR +FD K VT+ +++ GY G +L+LF
Sbjct: 69 DQDVYVGTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKC-GRSXVSLELFA 127
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
+M+ + ++ D + V+S L+ C L + G+Q+HA++++ + V+ LID Y+K
Sbjct: 128 QMR--ETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTK 185
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C + ++F+ +M +K + +SW T+IS
Sbjct: 186 CNRVKAGRKLFD------------------------QMVVK---------NIISWTTMIS 212
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFA--SALSACCGLRNVKCAKEIHSWVLKNGL 290
GY+QN E +KLF M N + W FA S L++C L ++ +++H++ +K L
Sbjct: 213 GYMQNSFDWEAMKLFGEM--NRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANL 270
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
SN FV +G++D+Y K + A+ + + +N S ++MI GYS Q + EA F
Sbjct: 271 ESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHE 330
Query: 351 LTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHP 410
+ + LF L V LLG A AL
Sbjct: 331 MRVR-------LFP-------------------------PSLLTFVSLLGVSASLFALEL 358
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
K+IH I++ GV +D S L+D+YSKC + A +F+ E+D+V++N M Y
Sbjct: 359 SKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQ 418
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTA-DYKISPET 529
H E+A+ L+ + KP+ TF A+++A + S+ G+++ N + P
Sbjct: 419 HLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFV 478
Query: 530 DHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKL 587
+ ++D+Y + +E+A + S D V S ++ + GEAEE L
Sbjct: 479 TN--ALVDMYAKCGSIEEARKMFNS-SIWRDVVCWNSMISTHAQH------GEAEEAL 527
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 126/511 (24%), Positives = 214/511 (41%), Gaps = 139/511 (27%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L++ H IKA L N LI +Y+K NLL +++K+FD M E+NV S+N +I
Sbjct: 255 LEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIE- 313
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM-- 123
GY + E ++AL+LF EM+ +R+
Sbjct: 314 ------------------------------GYSSQEKL-SEALELFHEMR-----VRLFP 337
Query: 124 -DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
T S L + L + +Q+H ++K FA S+LID+YSKC ++A V
Sbjct: 338 PSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHV 397
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
FE E+ D V WN + GY Q+ + EE
Sbjct: 398 FEEMNEK---------------------------------DIVVWNAMFFGYTQHLENEE 424
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
LKL+ + + + NE TFA+ ++A L +++ ++ H+ ++K GL PFV++ +VD
Sbjct: 425 ALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVD 484
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
+Y KC G++EEAR+ F+S ++VV W ++
Sbjct: 485 MYAKC-------------------------------GSIEEARKMFNSSIWRDVVCWNSM 513
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
S + + E + E + KEG+ + + V +L AC+ + G + G
Sbjct: 514 ISTHAQHGEAEEALGMFREMM-KEGIQPNYVTFVAVLSACSHAGXVEDGLNHFNSMPGFG 572
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
++ + + +V + + G + A + FIE+
Sbjct: 573 IKPGTEHYACVVSLLGRSGKLFEA----KEFIEK-------------------------- 602
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
I+P A+ + ++LSA R G+VE+G+
Sbjct: 603 ----MPIEPAAIVWRSLLSACRIAGNVELGK 629
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 155/314 (49%), Gaps = 38/314 (12%)
Query: 238 GDAEEGLKLFVRMG-ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFV 296
G +EE L +FV + ++G NE AS + AC L V+ ++H +V+++G + +V
Sbjct: 15 GYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYV 74
Query: 297 SSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNV 356
+ ++D Y K GB+E AR FD L EK
Sbjct: 75 GTSLIDFYSK-------------------------------NGBIEVARLVFDQLLEKTA 103
Query: 357 VVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHA 416
V WT + +GY K +L ++ + + VV D ++ +L AC++ L GK+IHA
Sbjct: 104 VTWTTIIAGYTKCGRSXVSLELFAQ-MRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHA 162
Query: 417 YILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
Y+LR G +MD +++ L+D Y+KC + +F + ++++ + MI+ Y + + +
Sbjct: 163 YVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWE 222
Query: 477 AILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA--C 534
A+ LF EM G KPD ++L++ CGS+E E+ K + E++ +
Sbjct: 223 AMKLFGEMNRLGWKPDGFACTSVLTS---CGSLEALEQGRQVHAYTIKANLESNEFVKNG 279
Query: 535 MIDLYGRANQLEKA 548
+ID+Y ++N L A
Sbjct: 280 LIDMYAKSNLLXDA 293
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 191/622 (30%), Positives = 312/622 (50%), Gaps = 80/622 (12%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
E N F NT+++ K L ++ L S +DLVT+N++L E + +AL+
Sbjct: 229 ELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQF-LEALEYLR 287
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSN-DASGFAVSSLIDMYS 171
EM E + D FT++S L C L + G++LHA+ +K + D + F S+L+DMY
Sbjct: 288 EM--VLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYC 345
Query: 172 KCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLI 231
C+ CRVF+G F R+ L WN +I
Sbjct: 346 NCKQVLSGCRVFDG----------------------------MFDRKIGL-----WNAMI 372
Query: 232 SGYVQNGDAEEGLKLFVRMGEN-GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL 290
+GY QN EE L LF+ M E+ G+ N T A + AC + IH +V+K GL
Sbjct: 373 TGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGL 432
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
+ FV + ++D+Y + G ++ A+R F
Sbjct: 433 DRDRFVQNALMDMYSRL-------------------------------GKIDIAKRIFGK 461
Query: 351 LTEKNVVVWTALFSGYVKAQNCEALFDLL----------SEFVTKEGVVTDALILVILLG 400
+ ++++V W + +GYV ++ E +L SE ++ + +++ L+ +L
Sbjct: 462 MEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILP 521
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL 460
+CA +AL GKEIHAY ++ + D + S LVDMY+KCG + + +F R+++
Sbjct: 522 SCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVIT 581
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
+NV++ Y HG+ + AI + M+ +G+KP+ VTF+++ +A H G V G K F +M
Sbjct: 582 WNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMK 641
Query: 521 ADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEED-AVILGSFLNVCRLNRNAEL 579
DY + P +DHYAC++DL GRA ++++A + + IP D A S L CR++ N E+
Sbjct: 642 KDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGACRIHNNLEI 701
Query: 580 AGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEH 639
A + L++LE N + YV LAN+Y++ G W + +R+ M+ + GCSW+
Sbjct: 702 GEIAAQNLIQLEPNVASHYVLLANIYSSAGLWYKATEVRRNMKAQGVRKEPGCSWIEHGD 761
Query: 640 EIHIFTVGDVSHPKTNAIYSVL 661
E+H F GD SHP++ + L
Sbjct: 762 EVHKFVAGDSSHPQSEKLRGYL 783
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 137/576 (23%), Positives = 245/576 (42%), Gaps = 126/576 (21%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
++ ++L + + HV G+ T+ N L+++Y K K+FD + ERN SWN
Sbjct: 106 LQDMDLGKQIHAHVYKFGYGVDSVTVA-NTLVNLYRKCGDFGAVYKVFDRISERNQVSWN 164
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
++I S LC + E +E AL+ F M DE
Sbjct: 165 SLI----------------------------SSLCSF---EKWEM-ALEAFRCM--LDED 190
Query: 121 IRMDEFTVTSTLNLCVKLL---NVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYE 177
+ FT+ S C + G+Q+HA+ ++ + + F +++L+ MY K
Sbjct: 191 VEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLR-KGELNSFIINTLVAMYGKMG--- 246
Query: 178 EACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQN 237
+ ++ L +F E D V+WNT++S QN
Sbjct: 247 --------------------------KLASSKVLLGSF----EGRDLVTWNTVLSSLCQN 276
Query: 238 GDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG-LISNPFV 296
E L+ M GV + T +S L AC L ++ KE+H++ LKNG L N FV
Sbjct: 277 EQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFV 336
Query: 297 SSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNV 356
S +VD+YC C+ +L G R FD + ++ +
Sbjct: 337 GSALVDMYCNCKQ--------VLSGCRV-----------------------FDGMFDRKI 365
Query: 357 VVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHA 416
+W A+ +GY + + E L E G++ ++ + ++ AC A + IH
Sbjct: 366 GLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHG 425
Query: 417 YILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
++++ G+ D+ + + L+DMYS+ G + A+ IF +RDLV +N +I Y E
Sbjct: 426 FVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHED 485
Query: 477 AILLFEEM--LEK---------GIKPDAVTFVAILSAFRHCGSVEMGEKYF-----NSMT 520
A+L+ +M LE+ +KP+++T + IL + ++ G++ N++
Sbjct: 486 ALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLA 545
Query: 521 ADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIP 556
D + + ++D+Y + L+ + + IP
Sbjct: 546 TDVAVG------SALVDMYAKCGCLQMSRKVFDQIP 575
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 146/323 (45%), Gaps = 37/323 (11%)
Query: 227 WNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVL 286
W L+ V++ E + ++ M G++ + F + L A L+++ K+IH+ V
Sbjct: 61 WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120
Query: 287 KNGL-ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEAR 345
K G + + V++ +V++Y KC G+
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKC-------------------------------GDFGAVY 149
Query: 346 RHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACA-- 403
+ FD ++E+N V W +L S + E + + E V + LV + AC+
Sbjct: 150 KVFDRISERNQVSWNSLISSLCSFEKWEMALEAF-RCMLDEDVEPSSFTLVSVALACSNF 208
Query: 404 -LQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYN 462
+ L GK++HAY LR G +++ +I+TLV MY K G + ++++ +F RDLV +N
Sbjct: 209 PMPEGLLMGKQVHAYGLRKG-ELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWN 267
Query: 463 VMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTAD 522
+++ + +A+ EM+ +G++PD T ++L A H + G++ +
Sbjct: 268 TVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKN 327
Query: 523 YKISPETDHYACMIDLYGRANQL 545
+ + + ++D+Y Q+
Sbjct: 328 GSLDENSFVGSALVDMYCNCKQV 350
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
H AIK L + L+ +Y+K L+ SRK+FD++P RNV +WN I+ A
Sbjct: 536 HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMA 588
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 188/649 (28%), Positives = 325/649 (50%), Gaps = 72/649 (11%)
Query: 32 IHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYN 91
I +++ + +R +FD++ + V SWN I++ + +A+ LFD P ++ +++N
Sbjct: 23 ISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFDKMPERNTISWN 82
Query: 92 SMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVG--------F 143
++ GY+ G ++A K+F +M E V S ++ + G F
Sbjct: 83 GLVSGYVK-NGMISEARKVFD---------KMPERNVVSWTSMVRGYVQEGLIDEAELLF 132
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
R +V + G +D EA R+F+ + ++++ M+ C
Sbjct: 133 WRMPEKNVVSWTVMLGGLIEDGRVD---------EARRLFDMIPVK-DVVASTNMIGGLC 182
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
EG + A + F P+ N V+W ++ISGY N + KLF M + NE T+
Sbjct: 183 SEGRLSEAREIFDEMPQRN-VVAWTSMISGYAMNNKVDVARKLFEVMPDK----NEVTWT 237
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
+ L Y + +N A + V+
Sbjct: 238 AMLKG-----------------------------------YTRSGRINEAAELFKAMPVK 262
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY-VKAQNCEALFDLLSEF 382
+ + MI+G+ L G + +AR FD + EK+ W+AL Y K EAL L
Sbjct: 263 PVAACNGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFELEAL--ALFSL 320
Query: 383 VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGN 442
+ +EGV + ++ +L C A+L G+++H+ ++R +D + S L+ MY KCG+
Sbjct: 321 MQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGD 380
Query: 443 MTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
+ + +F F +D+V++N +IA YA HG EKA+ +F EM G PD +TF+ +LSA
Sbjct: 381 LVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSA 440
Query: 503 FRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAV 562
+ G V+ G + F SM + Y++ +T+HYACM+DL GRA +L +A+ ++++P E DA+
Sbjct: 441 CGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAI 500
Query: 563 ILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMR 622
+ G+ L+ CR ++N +LA A +KLL+LE ++ Y+ L+N+YA++ W ++ +RK MR
Sbjct: 501 VWGALLSACRTHKNLDLAEIAAKKLLQLEPSSAGPYILLSNLYASQSRWKDVAELRKTMR 560
Query: 623 GMKGNRFAGCSWVYVEHEIHIFT-VGDVSHPKTNAIYSVLAIFTGELYE 670
++ GCSW+ V++++H+FT G SHP+ I L L E
Sbjct: 561 ARNVSKSPGCSWIEVDNKVHMFTGGGSASHPEHEMIMKKLEKLGASLRE 609
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 119/503 (23%), Positives = 220/503 (43%), Gaps = 92/503 (18%)
Query: 24 TTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP 83
T + N ++ Y + E++KLFD+MPERN SWN ++S +K+ + +AR +FD P
Sbjct: 46 TVTSWNAIVAGYFHNKRPAEAQKLFDKMPERNTISWNGLVSGYVKNGMISEARKVFDKMP 105
Query: 84 HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSAD------------EHIRMDEF----- 126
+++V++ SM+ GY+ EG +A LF M + E R+DE
Sbjct: 106 ERNVVSWTSMVRGYVQ-EGLIDEAELLFWRMPEKNVVSWTVMLGGLIEDGRVDEARRLFD 164
Query: 127 -----TVTSTLNLCVKLLNVG--------FGRQLHAFMVKTSNDASGFAVSSLIDM---- 169
V ++ N+ L + G F +V ++ SG+A+++ +D+
Sbjct: 165 MIPVKDVVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKL 224
Query: 170 ------------------YSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMA 211
Y++ EA +F+ + + + N M+ GE+ A
Sbjct: 225 FEVMPDKNEVTWTAMLKGYTRSGRINEAAELFKAMPVK-PVAACNGMIMGFGLNGEVGKA 283
Query: 212 LKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCG 271
F + E +D +W+ LI Y + G E L LF M GVR N + S LS C
Sbjct: 284 RWVFDQMKEKDDG-TWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGS 342
Query: 272 LRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSM 331
L ++ +++HS ++++ + +VSS ++ +Y KC
Sbjct: 343 LASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKC------------------------ 378
Query: 332 IVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTD 391
G++ +R FD + K++V+W ++ +GY + E ++ E + G D
Sbjct: 379 -------GDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFS-SGAAPD 430
Query: 392 ALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL--ISTLVDMYSKCGNMTYAEII 449
+ + +L AC + G EI ++ Q+D+K + +VD+ + G + A +
Sbjct: 431 EITFIGVLSACGYTGKVKEGLEIFES-MKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNL 489
Query: 450 FQNF-IERDLVLYNVMI-ACYAH 470
+N +E D +++ ++ AC H
Sbjct: 490 IENMPVEADAIVWGALLSACRTH 512
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIK---- 68
H Q +++ L ++ LI +Y K L +++FD +++ WN+II+ +
Sbjct: 353 HSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFG 412
Query: 69 SHDLKQARSLFDSSPHKDLVTYNSML--CGYINAEGYEADALKLFIEMQS 116
L+ +F S D +T+ +L CGY G + L++F M+S
Sbjct: 413 EKALEVFHEMFSSGAAPDEITFIGVLSACGYT---GKVKEGLEIFESMKS 459
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 194/656 (29%), Positives = 320/656 (48%), Gaps = 73/656 (11%)
Query: 7 KEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPE----RNVFSWNTI 62
KEA + + ++G+ IT L+ + L+E ++ + ++ +N++
Sbjct: 125 KEAFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSL 184
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
+ + K+ L A LF P KD V++N M+ GY G+ +ALKLF++M++ D +
Sbjct: 185 VDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITGYTKY-GFREEALKLFMQMRNMD--FQ 241
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
FT + L + V +V FG+Q+H +KTS F ++L+D YSK
Sbjct: 242 PSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSK---------- 291
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
+++A F PEL D VS+N +I+GY NG E+
Sbjct: 292 ----------------------HDYIDLAKNLFDEMPEL-DGVSYNIIITGYAWNGQYEK 328
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
LF R+ FA+ LS N+ ++ H+ + +S V + +VD
Sbjct: 329 SFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVD 388
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
+Y KCE E+A R F +L +N V WTA+
Sbjct: 389 MYAKCEKF-------------------------------EDANRIFANLAYRNSVPWTAI 417
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
S YV+ E + E + +E V D L A A A++ GK++H+ ++R+G
Sbjct: 418 ISIYVQKGFHEEALKMFKE-MNRENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLG 476
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
+ S LVDMY+ CG+M A +F+ +R++V +N +I+ Y+ +G E F
Sbjct: 477 LLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFA 536
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRA 542
+M+E G+ PD+V+F+++L+A H G VE YFNSMT YK+ P HYA MID+ R+
Sbjct: 537 DMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRS 596
Query: 543 NQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG-NNKARYVQL 601
+ +A + +P E D V+ S LN CR+++N +LA +A ++L +++ + A YV +
Sbjct: 597 GRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFKMDALRDAAAYVNM 656
Query: 602 ANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
+N+YA G W +++K MR + SWV ++H +H+FT D +HP+T I
Sbjct: 657 SNIYAEAGKWENAAKVKKAMRERGVKKVTAYSWVEIDHRVHVFTANDRTHPQTEQI 712
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/457 (24%), Positives = 183/457 (40%), Gaps = 72/457 (15%)
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
N S N MV+ + + A + F N+ VSW +I GY QN +E L+ M
Sbjct: 76 NTSSVNMMVSGYVKSRNLFRARELFESMFSRNE-VSWTIMIGGYSQNNQPKEAFNLYTEM 134
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
+GV+ + TFA+ LS +K +IHS +++ G ++ V + +VD YCK +
Sbjct: 135 CRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCL 194
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHF---------------------- 348
+ A + ++S S + MI GY+ G EEA + F
Sbjct: 195 DIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMS 254
Query: 349 ------------DSLTEKNVVVW-----TALFSGYVKAQNCEALFDLLSEFVTKEGVVTD 391
L K VW AL Y K + +L E +GV +
Sbjct: 255 VGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYN 314
Query: 392 ALI------------------------------LVILLGACALQAALHPGKEIHAYILRM 421
+I +L A++ L G++ HA +
Sbjct: 315 IIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVT 374
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
+ ++ + LVDMY+KC A IF N R+ V + +I+ Y G E+A+ +F
Sbjct: 375 TAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMF 434
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGR 541
+EM + + D TF + L A + SV +G K +S + + ++D+Y
Sbjct: 435 KEMNRENVHGDQATFASTLKASANLASVSLG-KQLHSSVIRLGLLSSVFSGSVLVDMYAN 493
Query: 542 ANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAE 578
++ AIE K +P + + V + ++ N +AE
Sbjct: 494 CGSMKDAIEVFKEMP-DRNIVCWNALISAYSQNGDAE 529
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 89/178 (50%), Gaps = 1/178 (0%)
Query: 323 RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF 382
RN+ S++ M+ GY N+ AR F+S+ +N V WT + GY + + F+L +E
Sbjct: 75 RNTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTE- 133
Query: 383 VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGN 442
+ + GV D + LL L +IH++I+R G + ++LVD Y K
Sbjct: 134 MCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCC 193
Query: 443 MTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAIL 500
+ A +F +D V +NVMI Y +G E+A+ LF +M +P TF A+L
Sbjct: 194 LDIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAML 251
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 128/316 (40%), Gaps = 70/316 (22%)
Query: 4 LNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
LNL H QA+ N L+ +Y+K ++ ++F + RN W II
Sbjct: 359 LNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAII 418
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
S ++ +G+ +ALK+F EM E++
Sbjct: 419 SIYVQ--------------------------------KGFHEEALKMFKEMNR--ENVHG 444
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
D+ T STL L +V G+QLH+ +++ +S F+ S L+DMY+ C ++A VF
Sbjct: 445 DQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVF 504
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
+ + N++ NA+++A Y QNGDAE
Sbjct: 505 KEMPDR-NIVCWNALISA--------------------------------YSQNGDAEAT 531
Query: 244 LKLFVRMGENGVRWNEHTFASALSACC--GLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
F M E+G+ + +F S L+AC GL K +S L + ++
Sbjct: 532 FSSFADMIESGLYPDSVSFLSVLTACSHRGLVE-KALWYFNSMTQVYKLDPRRKHYATMI 590
Query: 302 DVYCKCENMNYAESML 317
DV C+ N AE+++
Sbjct: 591 DVLCRSGRFNEAENLI 606
>gi|359480463|ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like, partial [Vitis vinifera]
Length = 621
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 189/559 (33%), Positives = 291/559 (52%), Gaps = 37/559 (6%)
Query: 114 MQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS-LIDMYSK 172
+Q D R T ++ L LC++L + G ++HA KTS G +S+ ++DMY K
Sbjct: 78 IQILDHVDRPSAATYSTLLQLCLQLRALDEGMKVHAH-TKTSGFVPGVVISNRILDMYIK 136
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C A R+F+ E +L S N M++ + G ++ A K F + E D SW + S
Sbjct: 137 CNSLVNAKRLFDEMAER-DLCSWNIMISGYAKAGRLQEARKLFDQMTE-RDNFSWTAMTS 194
Query: 233 GYVQNGDAEEGLKLFVRMGEN-GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI 291
GYV++ EE L+LF M + + N+ T +SAL+A ++++ KEIH +L+ GL
Sbjct: 195 GYVRHDQHEEALELFRAMQRHENFKCNKFTMSSALAASAAIQSLHLGKEIHGHILRIGLD 254
Query: 292 SNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL 351
+ V S + D+Y KC G++ EAR FD
Sbjct: 255 LDGVVWSALSDMYGKC-------------------------------GSIGEARHIFDKT 283
Query: 352 TEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG 411
+++VV WTA+ Y K E F L S+ + K G+ + +L ACA AA G
Sbjct: 284 VDRDVVSWTAMIDRYFKEGRREEGFALFSDLL-KSGIWPNEFTFSGVLNACADHAAEELG 342
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
K++H Y+ R+G STLV MY+KCGN+ A +F DLV + +I+ YA +
Sbjct: 343 KQVHGYMTRIGFDPSSFAASTLVHMYTKCGNIKNARRVFNGMPRPDLVSWTSLISGYAQN 402
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH 531
G ++A+ FE +L+ G +PD +TFV +LSA H G V+ G +YF+S+ + ++ DH
Sbjct: 403 GQPDEALQFFELLLKSGTQPDHITFVGVLSACTHAGLVDKGLEYFDSIKEKHGLTHTADH 462
Query: 532 YACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLE 591
YAC+IDL R+ +L++A + + +P E D + S L CR++ N +LA A E L +E
Sbjct: 463 YACLIDLLSRSGRLQEAEDIIDKMPIEPDKFLWASLLGGCRIHGNLKLAKRAAEALFEIE 522
Query: 592 GNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSH 651
N A Y LAN+YA G W + +RK M + G SW+ ++ E+H+F VGD SH
Sbjct: 523 PENPATYTTLANIYATAGLWGGVAEVRKVMDARGVVKKPGLSWIEIKREVHVFLVGDTSH 582
Query: 652 PKTNAIYSVLAIFTGELYE 670
K+ I+ L + + E
Sbjct: 583 AKSKEIHEFLGKLSKRMKE 601
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 137/506 (27%), Positives = 232/506 (45%), Gaps = 74/506 (14%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L E + H +G + +N+++ +Y K N L +++LFDEM ER++ SWN +IS
Sbjct: 105 LDEGMKVHAHTKTSGFVPGVVISNRILDMYIKCNSLVNAKRLFDEMAERDLCSWNIMISG 164
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
K+ L++AR LFD +D ++ +M GY+ + +E +AL+LF MQ E+ + ++
Sbjct: 165 YAKAGRLQEARKLFDQMTERDNFSWTAMTSGYVRHDQHE-EALELFRAMQR-HENFKCNK 222
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
FT++S L + ++ G+++H +++ D G S+L DMY KC EA +F+
Sbjct: 223 FTMSSALAASAAIQSLHLGKEIHGHILRIGLDLDGVVWSALSDMYGKCGSIGEARHIFDK 282
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
+ D VSW +I Y + G EEG
Sbjct: 283 TVD---------------------------------RDVVSWTAMIDRYFKEGRREEGFA 309
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
LF + ++G+ NE TF+ L+AC + K++H ++ + G + F +S +V +Y
Sbjct: 310 LFSDLLKSGIWPNEFTFSGVLNACADHAAEELGKQVHGYMTRIGFDPSSFAASTLVHMYT 369
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
KC GN++ ARR F+ + ++V WT+L SG
Sbjct: 370 KC-------------------------------GNIKNARRVFNGMPRPDLVSWTSLISG 398
Query: 366 YVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL-RMGV 423
Y + Q EAL E + K G D + V +L AC + G E I + G+
Sbjct: 399 YAQNGQPDEAL--QFFELLLKSGTQPDHITFVGVLSACTHAGLVDKGLEYFDSIKEKHGL 456
Query: 424 QMDKKLISTLVDMYSKCGNMTYAE-IIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
+ L+D+ S+ G + AE II + IE D L+ ++ HG+ + A E
Sbjct: 457 THTADHYACLIDLLSRSGRLQEAEDIIDKMPIEPDKFLWASLLGGCRIHGNLKLAKRAAE 516
Query: 483 EMLEKGIKPD-AVTFVAILSAFRHCG 507
+ E I+P+ T+ + + + G
Sbjct: 517 ALFE--IEPENPATYTTLANIYATAG 540
>gi|297823163|ref|XP_002879464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325303|gb|EFH55723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 713
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 195/672 (29%), Positives = 340/672 (50%), Gaps = 97/672 (14%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEAD--ALKLFIEMQSA 117
N +++ K L +A S+F++ KD+V++NS++ GY G + ++LF EM++
Sbjct: 55 NVLVNFYAKCGQLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSHTVMQLFREMRA- 113
Query: 118 DEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR--- 174
+ I + +T+ L + GRQ HA +VK S+ + +SL+ MY K
Sbjct: 114 -QDILPNAYTLAGIFKAESSLQSCTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLKY 172
Query: 175 ----------CYEE----------------------------------ACRVFEGCTEEV 190
CY++ A V+ G ++
Sbjct: 173 LYMVYYGFWLCYKKDVLRRQLKSSICFLEEKEKESDSDYVFTAVLSSLAATVYVGLGRQI 232
Query: 191 NLIS-----------KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
+ I+ NA+V + + A K F + N +++W+ +++GY QNG+
Sbjct: 233 HGITVKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRN-SITWSAMVTGYSQNGE 291
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
+ E +KLF RM G++ +E+T L+AC + + K++HS++LK G + F ++
Sbjct: 292 SLEAIKLFSRMFSAGIKPSEYTIVGVLNACSDICYLVEGKQLHSFLLKLGFERHLFATTA 351
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
+VD+Y K G + +AR+ FD L E++V +W
Sbjct: 352 LVDMYAKA-------------------------------GCLADARKGFDCLQERDVALW 380
Query: 360 TALFSGYVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
T+L SGYV+ + N EAL +L + G++ + + +L AC+ A L GK++H +
Sbjct: 381 TSLISGYVQNSDNEEAL--ILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHT 438
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
++ G ++ + S L MY+KCG++ ++F+ +D+V +N MI+ +H+G ++A+
Sbjct: 439 IKHGFGLEVPIGSALSTMYTKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEAL 498
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
LFEEML +G +PD VTFV I+SA H G VE G YF+ M+ + + P+ DHYACM+D+
Sbjct: 499 ELFEEMLAEGTEPDDVTFVNIISACSHKGFVERGWSYFHMMSDQFGLDPKVDHYACMVDV 558
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARY 598
RA QL++ EF++S + + L+ C+ + N EL A EKL+ L + Y
Sbjct: 559 LSRAGQLKETKEFIESASIDHGLCLWRILLSACKNHGNCELGVYAGEKLMSLGSRESSTY 618
Query: 599 VQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
VQLA +Y A G ++ R+ K MR ++ GCSW+ ++++ H+F VGD HP+
Sbjct: 619 VQLAGIYTALGRMRDVERVWKLMRTNGVSKEVGCSWIALKNQWHVFVVGDTMHPRIEETK 678
Query: 659 SVLAIFTGELYE 670
++++ + ++ E
Sbjct: 679 DLVSLVSRQMLE 690
>gi|449438554|ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 184/566 (32%), Positives = 304/566 (53%), Gaps = 7/566 (1%)
Query: 98 INAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTS-N 156
++++G +AL + A +R+ L LC K G+ +H + T
Sbjct: 37 LSSQGRLPEALSYLDRL--AQRGVRLPTGIFVDLLRLCAKAKYFKGGKCVHLHLKHTGFK 94
Query: 157 DASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFW 216
+ + LI MY +C EA +VF+ + NL S N M+A + G++ A K F
Sbjct: 95 RPTTIVANHLIGMYFECGRDVEARKVFDKMSVR-NLYSWNHMLAGYAKLGDVNNARKLFD 153
Query: 217 RQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVK 276
R E D VSWNT++ Y + G E + L+ + +N +FA L C L+ ++
Sbjct: 154 RMME-KDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQ 212
Query: 277 CAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYS 336
AK++H VL G +SN +SS IVD Y KC M A ++ V++ + ++++ GY+
Sbjct: 213 LAKQVHGQVLVAGFLSNLVLSSSIVDAYAKCGEMRCARTLFDEMLVKDIHAWTTIVSGYA 272
Query: 337 LQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILV 396
G+M A F + EKN V W+AL SGY + D ++ + K G+ +
Sbjct: 273 KWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMM-KFGINPEQYTFS 331
Query: 397 ILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IE 455
L ACA AAL GK++H Y++R + + ++S+L+DMYSKCG + + +F +
Sbjct: 332 SCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNK 391
Query: 456 RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKY 515
+D+V++N MI+ A +GH EKA+ +F +M+E G+KPD +TF+ ILSA H G V+ G ++
Sbjct: 392 QDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQEGLRF 451
Query: 516 FNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNR 575
F +MT D+ + P+ +HY+C+IDL GRA + + ++++ + D + + L VCR++
Sbjct: 452 FKAMTYDHGVFPDQEHYSCLIDLLGRAGCFVELVNELENMSCKPDDRVWSALLGVCRIHN 511
Query: 576 NAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWV 635
N EL + E+++ L+ + A YV LA++YA G W + ++R+ M + G SW+
Sbjct: 512 NIELGRKVAERVIELKPQSSAAYVSLASLYAFLGKWESVEKVRELMDEKFIRKERGISWI 571
Query: 636 YVEHEIHIFTVGDVSHPKTNAIYSVL 661
V ++ H F D HP IY +L
Sbjct: 572 DVGNKTHSFIASDRLHPLKEEIYLLL 597
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 137/534 (25%), Positives = 245/534 (45%), Gaps = 78/534 (14%)
Query: 24 TTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP 83
TTI N LI +Y + E+RK+FD+M RN++SWN +++ K D+ AR LFD
Sbjct: 97 TTIVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMM 156
Query: 84 HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGF 143
KD+V++N+++ Y +G +A+ L+ + + D + + F+ L LCVKL +
Sbjct: 157 EKDVVSWNTIVLAYAK-QGCFNEAIGLYRDFRRLD--MGFNAFSFAGVLILCVKLKELQL 213
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
+Q+H ++ ++ SS++D Y+KC A +F+ + ++ + +V+
Sbjct: 214 AKQVHGQVLVAGFLSNLVLSSSIVDAYAKCGEMRCARTLFDEMLVK-DIHAWTTIVSGYA 272
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
+ G+M A + F + PE N VSW+ LISGY +N E L F +M + G+ ++TF+
Sbjct: 273 KWGDMNSASELFHQMPEKN-PVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFS 331
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
S L AC + +K K++H ++++ N V S ++D+Y KC +
Sbjct: 332 SCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLE------------ 379
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV 383
+S V + L GN +++VVVW + S + + E + ++ V
Sbjct: 380 -----ASCCV-FHLMGN------------KQDVVVWNTMISALAQNGHGEKAMQMFNDMV 421
Query: 384 TKEGVVTDALILVILLGACALQAALHPG-KEIHAYILRMGVQMDKKLISTLVDMYSKCGN 442
+ G+ D + +++L AC+ + G + A GV D++ S L+D+ + G
Sbjct: 422 -ESGLKPDRITFIVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQEHYSCLIDLLGRAG- 479
Query: 443 MTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
F+E L E+ KPD + A+L
Sbjct: 480 ---------CFVE------------------------LVNELENMSCKPDDRVWSALLGV 506
Query: 503 FRHCGSVEMGEKYFNSMTADYKISPETD-HYACMIDLY---GRANQLEKAIEFM 552
R ++E+G K + ++ P++ Y + LY G+ +EK E M
Sbjct: 507 CRIHNNIELGRKVAERVI---ELKPQSSAAYVSLASLYAFLGKWESVEKVRELM 557
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 133/249 (53%), Gaps = 8/249 (3%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L+ A H Q + AG + ++ ++ Y+K +R +R LFDEM +++ +W TI+S
Sbjct: 211 LQLAKQVHGQVLVAGFLSNLVLSSSIVDAYAKCGEMRCARTLFDEMLVKDIHAWTTIVSG 270
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYI-NAEGYEADALKLFIEMQSADEHIRMD 124
K D+ A LF P K+ V++++++ GY N+ G+E AL F +M I +
Sbjct: 271 YAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHE--ALDYFTKMMKFG--INPE 326
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
++T +S L C + + G+Q+H ++++T + VSSLIDMYSKC E +C VF
Sbjct: 327 QYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFH 386
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN---DAVSWNTLISGYVQNGDAE 241
+ +++ N M++A + G E A++ F E D +++ ++S +G +
Sbjct: 387 LMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQ 446
Query: 242 EGLKLFVRM 250
EGL+ F M
Sbjct: 447 EGLRFFKAM 455
>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 944
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 212/725 (29%), Positives = 345/725 (47%), Gaps = 110/725 (15%)
Query: 17 IKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQAR 76
IK G T +N + + + + K++DEMP +N S NT+IS +K DL AR
Sbjct: 36 IKTGFNTDTCRSNFTVEDLLRRGQVSAALKVYDEMPHKNTVSTNTMISGYVKMGDLSSAR 95
Query: 77 SLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCV 136
LFD+ P + +VT+ ++L G+ + +A KLF +M D T T+ L C
Sbjct: 96 HLFDAMPDRTVVTW-TILMGWYAGNNHFDEAFKLFRQM--CRSCTLPDYVTFTTLLPGCN 152
Query: 137 KLLNVGFGRQLHAFMVKTSNDASGFAV--SSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
+ Q+HAF VK D + F + L+ Y + R + AC +FE ++
Sbjct: 153 DAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDK----- 207
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
D+V++NTLI+GY ++G E + LF++M ++G
Sbjct: 208 ----------------------------DSVTFNTLITGYEKDGLYTEAIHLFLKMRQSG 239
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM---- 310
+ ++ TF+ L A GL + +++H + G + V + I+ Y K + +
Sbjct: 240 HKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETR 299
Query: 311 -------------------------NYAESMLLLKGV------RNSFSISSMI------- 332
Y ES+ L + + R +F ++M+
Sbjct: 300 NLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLS 359
Query: 333 ---VGYSLQ--------------GN-----------MEEARRHFDSLTEKNVVVWTALFS 364
VG + GN +EA F SL++++ V WTAL S
Sbjct: 360 SLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALIS 419
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
GYV+ A L ++ + + D +L A A A+L GK++HA+I+R G
Sbjct: 420 GYVQKGLHGAGLKLFTK-MRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNL 478
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
+ S LVDMY+KCG++ A +F+ +R+ V +N +I+ YA +G E AI F +M
Sbjct: 479 ENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKM 538
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
++ G++PD+V+ + +L A HCG VE G ++F +M+ Y I+P+ HYACM+DL GR +
Sbjct: 539 IQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGR 598
Query: 545 LEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG-NNKARYVQLAN 603
+A + M +P E D ++ S LN CR+ +N LA A E+L +E + A YV ++N
Sbjct: 599 FAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLAERAAEQLFSMEKLRDAAAYVSMSN 658
Query: 604 VYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAI 663
+YAA G W + ++K MR + SWV V H+IH+F+ D +HP + I +
Sbjct: 659 IYAAAGKWENVRHVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVKKINE 718
Query: 664 FTGEL 668
T E+
Sbjct: 719 LTTEI 723
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 128/503 (25%), Positives = 222/503 (44%), Gaps = 107/503 (21%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H ++ G + NQ++H YSKH+ + E+R LF+EMPE + S+N +IS+
Sbjct: 267 HGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISS------- 319
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
Y AE YE ++L LF EMQ R F + L
Sbjct: 320 ------------------------YSQAEQYE-ESLNLFREMQCMGFDRR--NFPFATML 352
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
++ L ++ GRQ+H + + D+ +SL+DMY+KC ++EA +F+ ++
Sbjct: 353 SIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQR--- 409
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
VSW LISGYVQ G GLKLF +M
Sbjct: 410 ------------------------------STVSWTALISGYVQKGLHGAGLKLFTKMRG 439
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+R ++ TFA+ L A G ++ K++H++++++G + N F SG+VD+Y KC
Sbjct: 440 ANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKC----- 494
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G++++A + F+ + ++N V W AL S Y +
Sbjct: 495 --------------------------GSIKDAVQVFEEMPDRNAVSWNALISAYADNGDG 528
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE-IHAYILRMGVQMDKKLIS 431
EA ++ + + G+ D++ ++ +L AC+ + G E A G+ KK +
Sbjct: 529 EAAIGAFTKMI-QSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYA 587
Query: 432 TLVDMYSKCGNMTYAEIIFQNF-IERDLVLY-NVMIAC--YAHHGHEEKAILLFEEMLEK 487
++D+ + G AE + E D +++ +V+ AC Y + E+A E++
Sbjct: 588 CMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLAERAA---EQLFSM 644
Query: 488 GIKPDAVTFVAILSAFRHCGSVE 510
DA +V++ + + G E
Sbjct: 645 EKLRDAAAYVSMSNIYAAAGKWE 667
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 196/602 (32%), Positives = 301/602 (50%), Gaps = 71/602 (11%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N +I+ +K+ + +AR++F DLV++N+M+ G G E ++ +F+++
Sbjct: 945 NCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISG-CALSGLEECSVGMFVDLLRGG- 1002
Query: 120 HIRMDEFTVTSTLNLCVKLLN-VGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEE 178
+ D+FTV S L C L Q+HA +K F ++LID+YSK
Sbjct: 1003 -LLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSK------ 1055
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
G+ME A F Q D SWN ++ GY+ +G
Sbjct: 1056 --------------------------SGKMEEAEFLFVNQDGF-DLASWNAMMHGYIVSG 1088
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
D + L+L++ M E+G R N+ T A+A A GL +K K+I + V+K G + FV S
Sbjct: 1089 DFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVIS 1148
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
G++D+Y KC G ME ARR F+ + + V
Sbjct: 1149 GVLDMYLKC-------------------------------GEMESARRIFNEIPSPDDVA 1177
Query: 359 WTALFSGYVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
WT + SG V+ Q ALF ++K V D L+ AC+L AL G++IHA
Sbjct: 1178 WTTMISGCVENGQEEHALFTYHHMRLSK--VQPDEYTFATLVKACSLLTALEQGRQIHAN 1235
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
+++ D ++++LVDMY+KCGN+ A +F+ + +N MI A HG+ E+A
Sbjct: 1236 TVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEA 1295
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID 537
+ FEEM +G+ PD VTF+ +LSA H G V + F SM Y I PE +HY+C++D
Sbjct: 1296 LQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVD 1355
Query: 538 LYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKAR 597
RA ++ +A + + S+P E A + + LN CR+ + E EKLL LE ++ A
Sbjct: 1356 ALSRAGRIREAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAA 1415
Query: 598 YVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
YV L+NVYAA W + R MR + G SWV +++++H+F GD SH +T+ I
Sbjct: 1416 YVLLSNVYAAANQWENVASARNMMRKANVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVI 1475
Query: 658 YS 659
Y+
Sbjct: 1476 YN 1477
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 162/357 (45%), Gaps = 67/357 (18%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A+KAG+ L + + LI +YSK S +
Sbjct: 1031 HACAMKAGVVLDSFVSTTLIDVYSK-------------------------------SGKM 1059
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
++A LF + DL ++N+M+ GYI G AL+L+I MQ + E R ++ T+ +
Sbjct: 1060 EEAEFLFVNQDGFDLASWNAMMHGYI-VSGDFPKALRLYILMQESGE--RANQITLANAA 1116
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
L+ + G+Q+ A +VK + F +S ++DMY KC
Sbjct: 1117 KAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKC------------------- 1157
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
GEME A + F P +D V+W T+ISG V+NG E L + M
Sbjct: 1158 -------------GEMESARRIFNEIPSPDD-VAWTTMISGCVENGQEEHALFTYHHMRL 1203
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+ V+ +E+TFA+ + AC L ++ ++IH+ +K +PFV + +VD+Y KC N+
Sbjct: 1204 SKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIED 1263
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
A + S ++MIVG + GN EEA + F+ + + V F G + A
Sbjct: 1264 ARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSA 1320
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 132/562 (23%), Positives = 231/562 (41%), Gaps = 98/562 (17%)
Query: 52 PERNVFSWNTIISACIKSHDLKQARSLFDSSPH--KDLVTYNSMLCGYINAEGYEADALK 109
P+R F N +I+ K L AR LFD++P +DLVT+N++L + + D
Sbjct: 659 PDR--FLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAHADKA---RDGFH 713
Query: 110 LFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDM 169
LF ++ + + T+ +C+ + LH + VK F +L+++
Sbjct: 714 LFRLLRRS--FVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNI 771
Query: 170 YSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTF-------------- 215
Y+K EA +F+G +++ N M+ A G AL F
Sbjct: 772 YAKFGRIREARVLFDGMGLR-DVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVT 830
Query: 216 ----------------WRQPEL----------------NDAVSWNTLISGYVQNGDAEEG 243
W+ +L +D ++WN +S ++Q G+ E
Sbjct: 831 LCTLARVVKSKQNVLEWQLKQLKAYGTKLFMYDDDDDGSDVIAWNKTLSWFLQRGETWEA 890
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
+ FV M + V + TF LS GL ++ K+IH V+++GL V + ++++
Sbjct: 891 VDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINM 950
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y K G++ AR F + E ++V W +
Sbjct: 951 YVKT-------------------------------GSVSRARTVFWQMNEVDLVSWNTMI 979
Query: 364 SGYVKA--QNCEA--LFDLLSEFVTKEGVVTDALILVILLGAC-ALQAALHPGKEIHAYI 418
SG + + C DLL + G++ D + +L AC +L H +IHA
Sbjct: 980 SGCALSGLEECSVGMFVDLL-----RGGLLPDQFTVASVLRACSSLGGGCHLATQIHACA 1034
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
++ GV +D + +TL+D+YSK G M AE +F N DL +N M+ Y G KA+
Sbjct: 1035 MKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKAL 1094
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
L+ M E G + + +T A ++ G K ++ + + + ++D+
Sbjct: 1095 RLYILMQESGERANQITLANAAKAAGGLVGLKQG-KQIQAVVVKRGFNLDLFVISGVLDM 1153
Query: 539 YGRANQLEKAIEFMKSIPTEED 560
Y + ++E A IP+ +D
Sbjct: 1154 YLKCGEMESARRIFNEIPSPDD 1175
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 124/540 (22%), Positives = 211/540 (39%), Gaps = 110/540 (20%)
Query: 130 STLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEE 189
S L + ++ G++ HA ++ + + F ++LI MYSKC
Sbjct: 631 SILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKC---------------- 674
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELN-DAVSWNTLISGYVQNGDAEEGLKLFV 248
G + A K F P+ + D V+WN ++S + A +G LF
Sbjct: 675 ----------------GSLSSARKLFDTTPDTSRDLVTWNAILSAHADK--ARDGFHLFR 716
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
+ + V HT A C + A+ +H + +K GL + FV+ +V++Y K
Sbjct: 717 LLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFG 776
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGY--------------------------------- 335
+ A + G+R+ + M+ Y
Sbjct: 777 RIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTLAR 836
Query: 336 ---SLQGNMEEARRHFDSLTEK-----------NVVVWTALFSGYVKAQNCEALFDLLSE 381
S Q +E + + K +V+ W S +++ D +
Sbjct: 837 VVKSKQNVLEWQLKQLKAYGTKLFMYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVD 896
Query: 382 FVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
+ V D L V++L A L GK+IH ++R G+ + + L++MY K G
Sbjct: 897 MINSR-VACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTG 955
Query: 442 NMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
+++ A +F E DLV +N MI+ A G EE ++ +F ++L G+ PD T ++L
Sbjct: 956 SVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVL- 1014
Query: 502 AFRHCGSVEMGEKYFNSMTA-DYKISPETDHY--ACMIDLYGRANQLEKAIEFMKSIPTE 558
R C S+ G + A K D + +ID+Y ++ ++E+A EF+
Sbjct: 1015 --RACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEA-EFLF---VN 1068
Query: 559 EDAVILGSFLNVCRLNRNAELAGEAE----EKLLRL-----EGNNKARYVQLANVYAAEG 609
+D L S+ NA + G K LRL E +A + LAN A G
Sbjct: 1069 QDGFDLASW--------NAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAG 1120
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 36/215 (16%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
++F + ++ +K +++ AR +F+ P D V + +M+ G + G E AL + M
Sbjct: 1143 DLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVE-NGQEEHALFTYHHM 1201
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
+ + ++ DE+T + + C L + GRQ+HA VK + F ++SL+DMY+KC
Sbjct: 1202 RLS--KVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCG 1259
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
E+A +F+ T + S NAM+ G
Sbjct: 1260 NIEDARGLFKR-TNTSRIASWNAMIV--------------------------------GL 1286
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
Q+G+AEE L+ F M GV + TF LSAC
Sbjct: 1287 AQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSAC 1321
>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 830
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 192/659 (29%), Positives = 325/659 (49%), Gaps = 103/659 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H Q+IK G T N L+++Y+K L+ E+R +F M R
Sbjct: 180 HAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETR------------------ 221
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
D+V++N+++ G + G + +AL+LF + +S+ + E T ++ +
Sbjct: 222 -------------DMVSWNTLMAGLV-LNGRDLEALQLFHDSRSSI--TMLTESTYSTVI 265
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
NLC L ++G RQLH+ ++K + G +++L+D Y+K
Sbjct: 266 NLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNK-------------------- 305
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
G+++ AL F + VSW +I G +QNGD LF RM E
Sbjct: 306 ------------AGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMRE 353
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+GV N+ T+++ L+ + +IH+ V+K P V +
Sbjct: 354 DGVAPNDLTYSTILT----VSEASFPPQIHAQVIKTNYECTPTVGT-------------- 395
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
+++V YS + EEA F + +K+VV W+A+ + Y +A +C
Sbjct: 396 -----------------ALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDC 438
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAA-LHPGKEIHAYILRMGVQMDKKLIS 431
+ + +T G+ + + + ACA AA + G++ HA ++ + S
Sbjct: 439 NGATNAFIK-MTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVSS 497
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
LV MY++ G++ A+ +F+ +RDL+ +N M++ YA HG+ +KA+ +F +M +GI
Sbjct: 498 ALVSMYARKGSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDM 557
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
D +TF++++ H G VE G++YF+ M DY I+P DHYACM+DLY RA +L++ +
Sbjct: 558 DGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMSL 617
Query: 552 MKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNW 611
++ +P I + L CR+++N EL A EKLL LE + A YV L+N+Y+A G W
Sbjct: 618 IEGMPFPAGPTIWRALLGACRVHKNVELGKLAAEKLLSLEPLDSATYVLLSNIYSAAGKW 677
Query: 612 AEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYE 670
E +RK M K + AGCSW+ +++++H F D SHP + IY+ L T +L +
Sbjct: 678 KEKDEVRKLMDTKKVRKEAGCSWIQIKNKVHFFIASDKSHPLSEQIYAKLRAMTAKLKQ 736
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 104/441 (23%), Positives = 188/441 (42%), Gaps = 75/441 (17%)
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV-SSLIDMYSKCRCYEEACRVFEGCTEEV 190
+ +C + + G+QLHA V+ +D V +SL+DMY + +VFEG
Sbjct: 62 IKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEG----- 116
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
++ +N V+W +L++GY+Q G + + LF RM
Sbjct: 117 -MLKRNV---------------------------VTWTSLLTGYIQAGVLLDVMSLFFRM 148
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
GV N TF+S LS V + +H+ +K G S FV + ++++Y KC
Sbjct: 149 RAEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKC--- 205
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV-KA 369
G +EEAR F + +++V W L +G V
Sbjct: 206 ----------------------------GLVEEARVVFCRMETRDMVSWNTLMAGLVLNG 237
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
++ EAL L + + ++T++ + + CA L +++H+ +L+ G +
Sbjct: 238 RDLEAL-QLFHDSRSSITMLTESTYSTV-INLCANLKHLGLARQLHSSVLKHGFHSYGNV 295
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFI-ERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
++ L+D Y+K G + A +F +++V + MI +G A LF M E G
Sbjct: 296 MTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDG 355
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
+ P+ +T+ IL+ ++ + + +Y+ +P T A M+ Y + E+A
Sbjct: 356 VAPNDLTYSTILTVSEASFPPQIHAQVIKT---NYECTP-TVGTALMVS-YSKLCSTEEA 410
Query: 549 IEFMKSIPTEEDAVILGSFLN 569
+ K I ++D V + L
Sbjct: 411 LSIFKMI-DQKDVVSWSAMLT 430
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 120/253 (47%), Gaps = 30/253 (11%)
Query: 343 EARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF--VTKEGVVTDALILVILLG 400
+ R+ F+ + ++NVV WT+L +GY++A L D++S F + EGV + +L
Sbjct: 109 DGRKVFEGMLKRNVVTWTSLLTGYIQAG---VLLDVMSLFFRMRAEGVWPNPFTFSSVLS 165
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL 460
A Q + G+ +HA ++ G + ++L++MY+KCG + A ++F RD+V
Sbjct: 166 MVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVS 225
Query: 461 YNVMIACYAHHGHEEKAILLFEE------MLEKGIKPDAVTFVAILSAFR-----HCGSV 509
+N ++A +G + +A+ LF + ML + + A L H +
Sbjct: 226 WNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVL 285
Query: 510 EMG-EKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFL 568
+ G Y N MTA ++D Y +A QL+KA++ + ++ V + +
Sbjct: 286 KHGFHSYGNVMTA-------------LMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMI 332
Query: 569 NVCRLNRNAELAG 581
+ C N + LA
Sbjct: 333 DGCIQNGDIPLAA 345
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 197/680 (28%), Positives = 329/680 (48%), Gaps = 84/680 (12%)
Query: 9 ALICHVQAIKAGLTLTTITTNQLIHIYSK--HNLLRESRKL-------------FDEMPE 53
+++C +K L + Q +YS LL+E +L +
Sbjct: 20 SVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQ 79
Query: 54 RNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIE 113
N + NT++S K L AR +FDS +++V++ +M+ ++ A +A K +
Sbjct: 80 PNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFV-AGNKNLEAFKCYET 138
Query: 114 MQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKC 173
M+ A + D+ T S LN + G+++H +V+ + +SL+ MY+KC
Sbjct: 139 MKLAG--CKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKC 196
Query: 174 RCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISG 233
G++ A F R PE N V+W LI+G
Sbjct: 197 --------------------------------GDISKARVIFDRLPEKN-VVTWTLLIAG 223
Query: 234 YVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISN 293
Y Q G + L+L M + V N+ TFAS L C ++ K++H +++++G
Sbjct: 224 YAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRE 283
Query: 294 PFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
+V + ++ +YCKC G +EEAR+ F L
Sbjct: 284 LWVVNSLITMYCKC-------------------------------GGLEEARKLFSDLPH 312
Query: 354 KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
++VV WTA+ +GY + + +L + ++G+ D + +L +C+ A L GK
Sbjct: 313 RDVVTWTAMVTGYAQLGFHDEAINLFRR-MQQQGIKPDKMTFTSVLTSCSSPAFLQEGKR 371
Query: 414 IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMI-ACYAHHG 472
IH ++ G +D L S LV MY+KCG+M A ++F ER++V + +I C A HG
Sbjct: 372 IHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHG 431
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
+A+ F++M ++GIKPD VTF ++LSA H G VE G K+F SM DY I P +HY
Sbjct: 432 RCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHY 491
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
+C +DL GRA LE+A + S+P + G+ L+ CR++ + E A E +L+L+
Sbjct: 492 SCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDP 551
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
++ YV L+++YAA G + + ++R+ M + G SW+ V+ ++H+F V D SHP
Sbjct: 552 DDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHP 611
Query: 653 KTNAIYSVLAIFTGELYEIA 672
++ IY L T ++ E+
Sbjct: 612 ESEQIYVELGKLTEQIKEMG 631
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 156/327 (47%), Gaps = 35/327 (10%)
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL 290
+S + G +E L + M G R F L C LR+++ +E+H+ +LK+G+
Sbjct: 19 VSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGI 78
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
N ++ + ++ +Y KC G++ +ARR FDS
Sbjct: 79 QPNRYLENTLLSMYAKC-------------------------------GSLTDARRVFDS 107
Query: 351 LTEKNVVVWTALFSGYVKA-QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALH 409
+ ++N+V WTA+ +V +N EA E + G D + V LL A L
Sbjct: 108 IRDRNIVSWTAMIEAFVAGNKNLEAF--KCYETMKLAGCKPDKVTFVSLLNAFTNPELLQ 165
Query: 410 PGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYA 469
G+++H I+ G++++ ++ ++LV MY+KCG+++ A +IF E+++V + ++IA YA
Sbjct: 166 LGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYA 225
Query: 470 HHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPET 529
G + A+ L E M + + P+ +TF +IL ++E G+K + E
Sbjct: 226 QQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQS-GYGREL 284
Query: 530 DHYACMIDLYGRANQLEKAIEFMKSIP 556
+I +Y + LE+A + +P
Sbjct: 285 WVVNSLITMYCKCGGLEEARKLFSDLP 311
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 126/560 (22%), Positives = 236/560 (42%), Gaps = 80/560 (14%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R +L++ H +K+G+ N L+ +Y+K L ++R++FD + +RN+ SW
Sbjct: 59 RLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTA 118
Query: 62 IISACIKSHDLKQARSLFDSSP----HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSA 117
+I A + + +A +++ D VT+ S+L + N E + L + M+
Sbjct: 119 MIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQ---LGQKVHMEIV 175
Query: 118 DEHIRMDEFTVTSTLNLCVKLLNVG-----FGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
+ + ++ TS + + K ++ F R +V + +G+A +D+ +
Sbjct: 176 EAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALE 235
Query: 173 -CRCYEEA---------CRVFEGCTEEV-------------------NLISKNAMVAACC 203
++A + +GCT L N+++ C
Sbjct: 236 LLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYC 295
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
+ G +E A K F P D V+W +++GY Q G +E + LF RM + G++ ++ TF
Sbjct: 296 KCGGLEEARKLFSDLPH-RDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFT 354
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
S L++C ++ K IH ++ G + ++ S +V +Y KC
Sbjct: 355 SVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKC---------------- 398
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG-YVKAQNCEALFDLLSEF 382
G+M++A F+ ++E+NVV WTA+ +G + C + +
Sbjct: 399 ---------------GSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQ- 442
Query: 383 VTKEGVVTDALILVILLGACALQAALHPG-KEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
+ K+G+ D + +L AC + G K + L G++ + S VD+ + G
Sbjct: 443 MKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAG 502
Query: 442 NMTYAE--IIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
++ AE I+ FI V ++ AC H E+ E +L+ D +VA+
Sbjct: 503 HLEEAENVILSMPFIPGPSVWGALLSACRV-HSDVERGERAAENVLKLDPDDDG-AYVAL 560
Query: 500 LSAFRHCGSVEMGEKYFNSM 519
S + G E EK M
Sbjct: 561 SSIYAAAGRYEDAEKVRQVM 580
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 179/598 (29%), Positives = 312/598 (52%), Gaps = 68/598 (11%)
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
+A + + A S+F D YN M+ G+ + +A+ LF EM + ++
Sbjct: 66 AAILLPTSMDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPH-EAILLFKEMH--ENSVQP 122
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
DEFT L +C +L + G Q+HA ++K + GF ++LI MY+ C
Sbjct: 123 DEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANC---------- 172
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
GE+E+A + F E N +WN++ +GY ++G+ EE
Sbjct: 173 ----------------------GEVEVARRVFDEMSERN-VRTWNSMFAGYTKSGNWEEV 209
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
+KLF M E +R++E T S L+AC L +++ + I+ +V + GL NP + + +VD+
Sbjct: 210 VKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDM 269
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y KC G ++ ARR FD + ++VV W+A+
Sbjct: 270 YAKC-------------------------------GQVDTARRLFDQMDRRDVVAWSAMI 298
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
SGY +A C DL E + K + + + +V +L +CA+ AL GK +H +I + +
Sbjct: 299 SGYSQASRCREALDLFHE-MQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRM 357
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
++ L + L+D Y+KCG++ + +F ++++ + V+I A +G +KA+ F
Sbjct: 358 KLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYL 417
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRAN 543
MLEK ++P+ VTF+ +LSA H G V+ G F SM+ D+ I P +HY CM+D+ GRA
Sbjct: 418 MLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAG 477
Query: 544 QLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLAN 603
+E+A +F+K++P + +AVI + L C++++N E+ E+ ++L+ LE + Y+ L+N
Sbjct: 478 LIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSN 537
Query: 604 VYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+YA+ G W + ++R +M+ + GCS + ++ IH F D H ++ IY+ +
Sbjct: 538 IYASVGRWEDALKVRGEMKEKGIKKTPGCSLIELDGVIHEFFAEDNVHSQSEEIYNAI 595
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 128/498 (25%), Positives = 204/498 (40%), Gaps = 89/498 (17%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L E H +K G N LIH+Y+ + +R++FDEM ERNV +W
Sbjct: 140 LSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTW------ 193
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
NSM GY + +E + +KLF EM D IR DE
Sbjct: 194 -------------------------NSMFAGYTKSGNWE-EVVKLFHEMLELD--IRFDE 225
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
T+ S L C +L ++ G ++ ++ + + ++SL+DMY+KC + A R+F+
Sbjct: 226 VTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFD- 284
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
Q + D V+W+ +ISGY Q E L
Sbjct: 285 --------------------------------QMDRRDVVAWSAMISGYSQASRCREALD 312
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
LF M + + NE T S LS+C L ++ K +H ++ K + + + ++D Y
Sbjct: 313 LFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYA 372
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
KC ++ + + V+N S + +I G + G ++A +F + EKNV F G
Sbjct: 373 KCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIG 432
Query: 366 YVKA-------QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
+ A LF +S E + +V +LG L +E +I
Sbjct: 433 VLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLI------EEAFQFI 486
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAE------IIFQNFIERDLVLYNVMIACYAHHG 472
M +Q + + TL+ N+ E II + D +L + + YA G
Sbjct: 487 KNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNI---YASVG 543
Query: 473 HEEKAILLFEEMLEKGIK 490
E A+ + EM EKGIK
Sbjct: 544 RWEDALKVRGEMKEKGIK 561
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 128/285 (44%), Gaps = 38/285 (13%)
Query: 266 LSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD--VYCKCENMNYAESMLLLKGVR 323
L C +R++ EIH+ ++K L+ P V+ +++ +M+YA S+
Sbjct: 31 LEQCKTIRDLN---EIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQIDEP 87
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV 383
+S + + MI G++L+ + EA F + E +V
Sbjct: 88 DSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQ-------------------------- 121
Query: 384 TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNM 443
D +L C+ AL G++IHA I++ G + +TL+ MY+ CG +
Sbjct: 122 ------PDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEV 175
Query: 444 TYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAF 503
A +F ER++ +N M A Y G+ E+ + LF EMLE I+ D VT V++L+A
Sbjct: 176 EVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTAC 235
Query: 504 RHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
+E+GE + N + + ++D+Y + Q++ A
Sbjct: 236 GRLADLELGE-WINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTA 279
>gi|242051555|ref|XP_002454923.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
gi|241926898|gb|EES00043.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
Length = 741
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 189/616 (30%), Positives = 318/616 (51%), Gaps = 74/616 (12%)
Query: 46 KLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEA 105
KL NVF +++ K + AR +FD PH++ V++ +M+ GY + E
Sbjct: 148 KLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYATGKCSE- 206
Query: 106 DALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV-- 163
+A +LF + + + +EF T+ L+ L + G QLH ++K + GF
Sbjct: 207 EAFELF-RLMLQECPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLK--DGLVGFVSVE 263
Query: 164 SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELND 223
+SL+ MY+K C + A VF G ++E N
Sbjct: 264 NSLVTMYAKAECMDAAMAVF-GSSKERN-------------------------------- 290
Query: 224 AVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHS 283
+++W+ +I+GY QNG+A+ +F++M G E TF L+A + + K+ H
Sbjct: 291 SITWSAMITGYAQNGEADCAATMFLQMHSAGFSPTEFTFVGILNASSDMGALVVGKQAHG 350
Query: 284 WVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEE 343
++K G +V S +VD+Y KC G +
Sbjct: 351 LMVKLGFERQVYVKSALVDMYAKC-------------------------------GCTGD 379
Query: 344 ARRHFDSLTE-KNVVVWTALFSGYVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLGA 401
A+ F L + +VV+WTA+ +G+V+ ++ EAL +L + KEGV+ L + +L A
Sbjct: 380 AKDGFHQLYDVDDVVIWTAMITGHVQNGEHEEAL--MLYSRMDKEGVMPSYLTVTSVLRA 437
Query: 402 CALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLY 461
CA AAL PGK++HA IL+ G + + + L MYSKCGN+ + ++F+ +RD++ +
Sbjct: 438 CACLAALEPGKQLHAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDIISW 497
Query: 462 NVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTA 521
N +I+ ++ HG A+ LFEEM +GI PD +TF+ +L A H G V+ G YF +M+
Sbjct: 498 NSIISGFSQHGRGRDALDLFEEMKLEGIAPDHITFINVLCACSHMGLVDRGWFYFRAMSK 557
Query: 522 DYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAG 581
DY + P+ DHYAC++D+ RA QL++A +F++SI + + L CR R+ ++
Sbjct: 558 DYGLIPKLDHYACIVDILSRAGQLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGA 617
Query: 582 EAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEI 641
A E+L+ L + + Y+ L+N+YAA+ W ++ R+R MR ++ GCSWV + +++
Sbjct: 618 YAGEQLMELGTEDSSAYILLSNIYAAQRKWNDVERVRHLMRLRGVSKDPGCSWVELNNQV 677
Query: 642 HIFTVGDVSHPKTNAI 657
++F VG+ HP+ I
Sbjct: 678 NVFVVGEQQHPEAEKI 693
>gi|242091920|ref|XP_002436450.1| hypothetical protein SORBIDRAFT_10g002910 [Sorghum bicolor]
gi|241914673|gb|EER87817.1| hypothetical protein SORBIDRAFT_10g002910 [Sorghum bicolor]
Length = 686
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 205/677 (30%), Positives = 348/677 (51%), Gaps = 49/677 (7%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTIT-TNQLIHIYSKHNLL--RESRKLFDEMPERNVF 57
+RS + H +K+G +++ TN ++ +Y + + L R++ +LFDEMP +N F
Sbjct: 14 LRSCSAAAGRQLHQLLLKSGHVPSSLPPTNSVLLMYVRGSPLYSRDAHRLFDEMPTKNCF 73
Query: 58 SWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEA-----------D 106
S+N++I+A KS D + A +F S P ++ ++N+++ G A + D
Sbjct: 74 SYNSLITALFKSGDHRAALRVFRSMPDRNTFSWNAVITGLAGAGDLDTARDLLEEMPVKD 133
Query: 107 A------LKLFIEMQSADEHIRM-----------------DEFTVTSTLNLCVKLLNVGF 143
A L F+ DE + D F +T+ + C +
Sbjct: 134 AVACHAVLHRFVRCGRVDEAFALLKRIGSHCNPDVIPPWSDPFVLTTVVGACADRMKYEI 193
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
GRQ+HA +V + +LIDMY KCR + A R+ + V+ IS +A+V
Sbjct: 194 GRQVHARLVVAKTEIDSVLACALIDMYCKCRDLDSA-RLVLDRLKHVDEISLSALVYGYA 252
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
G++ AL F + + A+ WN+LISG V + LFVRM + + N +A
Sbjct: 253 SYGQLHKALCLFDKVENPSIAL-WNSLISGCVPAYHGDSAFVLFVRMLRSDMLPNSSIYA 311
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
L+ C L +K ++ H+ LK+G +++ +S ++D Y KC +A++ +R
Sbjct: 312 IVLNMCGFLGMLKPGQQTHACALKSGAVNDLIAASALIDFYSKCSL--WADACQAFGELR 369
Query: 324 --NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSE 381
++ ++SMI YS G ++EARR FD + K+V+ W ++ G+ +QN AL D +
Sbjct: 370 HHDTIVLNSMITVYSNCGQIDEARRVFDMIPSKSVISWNSMIVGF--SQNGHAL-DAMEL 426
Query: 382 FVTKE--GVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
F G+ D + + +L A ++ G++I A + +G+Q D ++S+L+D+Y K
Sbjct: 427 FCEMHWLGLQIDNVAVSSVLSASGSICSISFGEQIFALAIALGLQSDHIVVSSLIDLYCK 486
Query: 440 CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
CGN+ IF D VL+N M+ YA +G+ +A+ + M +G+KP TFV +
Sbjct: 487 CGNLANGCRIFDGIDNPDEVLWNSMLIGYASNGYGLEALKFLDLMRSRGLKPSERTFVGV 546
Query: 500 LSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE 559
LSA H G VE G ++F M D+ +SP +HYAC+ DL RA +L++A+EF++++P +
Sbjct: 547 LSACCHSGLVEEGLRWFYRMKEDFGVSPSAEHYACVTDLLVRAGRLDEAVEFIENMPFKA 606
Query: 560 DAVILGSFLNVCRLNRNAELAGEAEEKLLRLE-GNNKARYVQLANVYAAEGNWAEMGRIR 618
DA+ S + C+ N L + KL+ + + YVQL++ AA G+W + IR
Sbjct: 607 DAISWTSIIGGCKAQGNEALLHKVANKLMETGLSPHSSLYVQLSSTLAAHGDWDKSAEIR 666
Query: 619 KQMRGMKGNRFAGCSWV 635
M + ++ AGCSW+
Sbjct: 667 SMMHDRRISKNAGCSWI 683
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 184/618 (29%), Positives = 307/618 (49%), Gaps = 68/618 (11%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
+ N + NT++S K L AR +FD +++V++ +M+ ++ A +A K +
Sbjct: 128 QPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFV-AGNQNLEAYKCYE 186
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
M+ A + D+ T S LN + G+++H + K + +SL+ MY+K
Sbjct: 187 TMKLAG--CKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAK 244
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C G++ A F + PE N V+W LI+
Sbjct: 245 C--------------------------------GDISKAQVIFDKLPEKN-VVTWTLLIA 271
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
GY Q G + L+L +M + V N+ T+ S L C ++ K++H +++++G
Sbjct: 272 GYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGR 331
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
+V + ++ +YCKC G ++EAR+ F L
Sbjct: 332 EIWVVNALITMYCKC-------------------------------GGLKEARKLFGDLP 360
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
++VV WTA+ +GY + + DL + ++G+ D + L +C+ A L GK
Sbjct: 361 HRDVVTWTAMVTGYAQLGFHDEAIDLFRR-MQQQGIKPDKMTFTSALTSCSSPAFLQEGK 419
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
IH ++ G +D L S LV MY+KCG+M A ++F ER++V + MI A HG
Sbjct: 420 SIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHG 479
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
+A+ FE+M ++GIKPD VTF ++LSA H G VE G K+F SM DY I P +HY
Sbjct: 480 RCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHY 539
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
+C +DL GRA LE+A + ++P + + G+ L+ CR++ + E A E +L+L+
Sbjct: 540 SCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDP 599
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
++ YV L+N+YAA G + + ++R+ M + G SW+ V+ ++H+F V D SHP
Sbjct: 600 DDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHP 659
Query: 653 KTNAIYSVLAIFTGELYE 670
+ IY+ L T ++ E
Sbjct: 660 EAKEIYAELGKLTEQIKE 677
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 139/621 (22%), Positives = 262/621 (42%), Gaps = 130/621 (20%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMP----ERNVFSWNTII 63
EA C+ AG +T L++ ++ LL+ +K+ E+ E +++
Sbjct: 180 EAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLV 239
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
K D+ +A+ +FD P K++VT+ ++ GY +G AL+L +MQ A+ +
Sbjct: 240 GMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQ-QGQVDVALELLEKMQQAE--VAP 296
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
++ T TS L C L + G+++H +++++ + V++LI MY KC
Sbjct: 297 NKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKC---------- 346
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
G ++ A K F P D V+W +++GY Q G +E
Sbjct: 347 ----------------------GGLKEARKLFGDLPH-RDVVTWTAMVTGYAQLGFHDEA 383
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
+ LF RM + G++ ++ TF SAL++C ++ K IH ++ G + ++ S +V +
Sbjct: 384 IDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSM 443
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y KC G+M++AR F+ ++E+NVV WTA+
Sbjct: 444 YAKC-------------------------------GSMDDARLVFNQMSERNVVAWTAMI 472
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG-KEIHAYILRMG 422
+G + C + E + K+G+ D + +L AC + G K + L G
Sbjct: 473 TGCAQHGRCREALEYF-EQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYG 531
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
++ + S VD+ + G++ AE +
Sbjct: 532 IKPMVEHYSCFVDLLGRAGHLEEAENV--------------------------------- 558
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD-HYACMIDLYGR 541
+L +P + A+LSA R VE GE+ ++ K+ P+ D Y + ++Y
Sbjct: 559 -ILTMPFQPGPSVWGALLSACRIHSDVERGERAAENV---LKLDPDDDGAYVALSNIYAA 614
Query: 542 ANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQL 601
A + E A E ++ + + D V E + + ++G +V+
Sbjct: 615 AGRYEDA-EKVRQVMEKRDVV------------------KEPGQSWIEVDGKVHVFHVED 655
Query: 602 ANVYAAEGNWAEMGRIRKQMR 622
+ A+ +AE+G++ +Q++
Sbjct: 656 KSHPEAKEIYAELGKLTEQIK 676
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 120/518 (23%), Positives = 210/518 (40%), Gaps = 114/518 (22%)
Query: 92 SMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFM 151
S+LC +G +AL + M + D F L C +L ++ GR++HA +
Sbjct: 69 SILC----KQGRLKEALGILNTMILQGTRVYSDVFR--GLLQECARLRSLEQGREVHAAI 122
Query: 152 VKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMA 211
+K+ + + ++L+ MY+KC +A RVF+G +
Sbjct: 123 LKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRD----------------------- 159
Query: 212 LKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCG 271
+ VSW +I +V E K + M G + ++ TF S L+A
Sbjct: 160 ----------RNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTN 209
Query: 272 LRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSM 331
++ +++H + K GL P V + +V +Y KC +++ A+ + +N + + +
Sbjct: 210 PELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLL 269
Query: 332 IVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTD 391
I GY+ QG ++ A +LL + E V +
Sbjct: 270 IAGYAQQGQVDVA-------------------------------LELLEKMQQAE-VAPN 297
Query: 392 ALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQ 451
+ +L C AL GK++H YI++ G + +++ L+ MY KCG + A +F
Sbjct: 298 KITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFG 357
Query: 452 NFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFV-------------- 497
+ RD+V + M+ YA G ++AI LF M ++GIKPD +TF
Sbjct: 358 DLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQE 417
Query: 498 ---------------------AILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMI 536
A++S + CGS++ FN M+ ++ + MI
Sbjct: 418 GKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVA-----WTAMI 472
Query: 537 D---LYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVC 571
+GR + + E MK + D V S L+ C
Sbjct: 473 TGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSAC 510
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 147/293 (50%), Gaps = 34/293 (11%)
Query: 223 DAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIH 282
D ++ + +S + G +E L + M G R F L C LR+++ +E+H
Sbjct: 60 DTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVH 119
Query: 283 SWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNME 342
+ +LK+G+ N ++ + ++ +Y KC G++
Sbjct: 120 AAILKSGIQPNRYLENTLLSMYAKC-------------------------------GSLT 148
Query: 343 EARRHFDSLTEKNVVVWTALFSGYVKA-QNCEALFDLLSEFVTKEGVVTDALILVILLGA 401
+ARR FD + ++N+V WTA+ +V QN EA E + G D + V LL A
Sbjct: 149 DARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAY--KCYETMKLAGCKPDKVTFVSLLNA 206
Query: 402 CALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLY 461
L G+++H I + G++++ ++ ++LV MY+KCG+++ A++IF E+++V +
Sbjct: 207 FTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTW 266
Query: 462 NVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
++IA YA G + A+ L E+M + + P+ +T+ +IL ++E G+K
Sbjct: 267 TLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKK 319
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 105/206 (50%), Gaps = 5/206 (2%)
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD 457
LL CA +L G+E+HA IL+ G+Q ++ L +TL+ MY+KCG++T A +F +R+
Sbjct: 102 LLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRN 161
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK-YF 516
+V + MI + +A +E M G KPD VTFV++L+AF + +++G+K +
Sbjct: 162 IVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHM 221
Query: 517 NSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRN 576
A ++ P ++ +Y + + KA +P E++ V +
Sbjct: 222 EIAKAGLELEPRVG--TSLVGMYAKCGDISKAQVIFDKLP-EKNVVTWTLLIAGYAQQGQ 278
Query: 577 AELAGEAEEKLLRLE-GNNKARYVQL 601
++A E EK+ + E NK Y +
Sbjct: 279 VDVALELLEKMQQAEVAPNKITYTSI 304
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 109/251 (43%), Gaps = 38/251 (15%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTI 62
L L+ H I++G N LI +Y K L+E+RKLF ++P R+V +W
Sbjct: 311 PLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTW--- 367
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
+M+ GY G+ +A+ LF MQ + I+
Sbjct: 368 ----------------------------TAMVTGYAQL-GFHDEAIDLFRRMQQ--QGIK 396
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
D+ T TS L C + G+ +H +V + S+L+ MY+KC ++A V
Sbjct: 397 PDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLV 456
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTF---WRQPELNDAVSWNTLISGYVQNGD 239
F +E N+++ AM+ C + G AL+ F +Q D V++ +++S G
Sbjct: 457 FNQMSER-NVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGL 515
Query: 240 AEEGLKLFVRM 250
EEG K F M
Sbjct: 516 VEEGRKHFRSM 526
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 182/547 (33%), Positives = 293/547 (53%), Gaps = 38/547 (6%)
Query: 127 TVTSTL-NLCVKLLNVGFGRQLHAFMVKTSNDASG-FAVSSLIDMYSKCRCYEEACRVFE 184
+V STL C+K + G+++H +K S G F ++ L++MY+KC ++ ++F+
Sbjct: 71 SVYSTLIQSCIKSRLLQQGKKVHQH-IKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFD 129
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
E +L S N +++ + G ++ A F + PE D SW +ISGYV++ E L
Sbjct: 130 EMPER-DLCSWNILISGYAKMGLLQEAKSLFDKMPE-RDNFSWTAMISGYVRHDRPNEAL 187
Query: 245 KLFVRMGE-NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
+LF M + + N+ T +SAL+A + ++ KEIH ++++ GL S+ V S + D+
Sbjct: 188 ELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDM 247
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y KC G++EEAR FD + ++++V WTA+
Sbjct: 248 YGKC-------------------------------GSIEEARHIFDKMVDRDIVTWTAMI 276
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
Y + + FDL ++ + + G+ + +L ACA Q + GK++H Y+ R+G
Sbjct: 277 DRYFQDGRRKEGFDLFADLL-RSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGF 335
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
S LV MYSKCGNM AE +F+ + DL + +IA YA +G ++AI FE
Sbjct: 336 DPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFEL 395
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRAN 543
+++ G +PD +TFV +LSA H G V+ G YF+S+ Y ++ DHYAC+IDL R+
Sbjct: 396 LVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSG 455
Query: 544 QLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLAN 603
Q ++A + + + D + S L CR++ N +LA A E L +E N A YV LAN
Sbjct: 456 QFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVTLAN 515
Query: 604 VYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAI 663
+YA G W+E+ +IRK M + G SW+ ++ ++H+F VGD SHPK+ I L
Sbjct: 516 IYATAGMWSEVAKIRKTMDDRGVVKKPGLSWIAIKRDVHVFLVGDDSHPKSKEINEFLGK 575
Query: 664 FTGELYE 670
+ + E
Sbjct: 576 LSKRMKE 582
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 136/510 (26%), Positives = 238/510 (46%), Gaps = 72/510 (14%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
++S L++ H +G N+L+ +Y+K + L +S+KLFDEMPER++ SWN
Sbjct: 81 IKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWN 140
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
+IS K L++A+SLFD P +D ++ +M+ GY+ + +AL+LF M+ +D
Sbjct: 141 ILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHD-RPNEALELFRMMKRSDNS 199
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
+ ++FTV+S L + + G+++H ++++T D+ S+L DMY KC EEA
Sbjct: 200 -KSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEAR 258
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+F+ + D V+W +I Y Q+G
Sbjct: 259 HIFDKMVDR---------------------------------DIVTWTAMIDRYFQDGRR 285
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
+EG LF + +G+R NE TF+ L+AC + + K++H ++ + G F +S +
Sbjct: 286 KEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASAL 345
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
V +Y KC NM AE + + FS +S+I GY+ G +EA R+F
Sbjct: 346 VHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYF------------ 393
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE-IHAYIL 419
E + K G D + V +L ACA + G + H+
Sbjct: 394 --------------------ELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKE 433
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAE-IIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
+ G+ + ++D+ ++ G AE II + ++ D L+ ++ HG+ + A
Sbjct: 434 QYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQ 493
Query: 479 LLFEEMLEKGIKPD-AVTFVAILSAFRHCG 507
E + E I+P+ T+V + + + G
Sbjct: 494 RAAEALFE--IEPENPATYVTLANIYATAG 521
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 65/115 (56%), Gaps = 5/115 (4%)
Query: 392 ALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQ 451
A + L+ +C L GK++H +I G +++ L++MY+KC ++ ++ +F
Sbjct: 70 ASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFD 129
Query: 452 NFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAF-RH 505
ERDL +N++I+ YA G ++A LF++M E+ D ++ A++S + RH
Sbjct: 130 EMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPER----DNFSWTAMISGYVRH 180
>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
Length = 869
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 195/629 (31%), Positives = 313/629 (49%), Gaps = 91/629 (14%)
Query: 57 FSWNTIISACIKSHDLKQARSLFDS-----SPHKDLVTYNSMLCGYINAEGYEADALKLF 111
F++N ++S + + A+ LF S SP +VT+N+M+ + + G +A+++
Sbjct: 201 FAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQS-GRCGEAIEVI 259
Query: 112 IEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSN-DASGFAVSSLIDMY 170
+M + +R D T S L C +L + GR++HA+++K S+ A+ F S+L+DMY
Sbjct: 260 YDMVA--RGVRPDGITFASALPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMY 317
Query: 171 SKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTL 230
+ A RVF+ MV G ++ L WN +
Sbjct: 318 ASHERVGVARRVFD-------------MVPG----GHRQLGL--------------WNAM 346
Query: 231 ISGYVQNGDAEEGLKLFVRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG 289
+ GY Q G EE L+LF RM E GV +E T A L AC + +H +VLK G
Sbjct: 347 VCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKRG 406
Query: 290 LISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFD 349
+ NPFV + ++D+Y + G+ME AR F
Sbjct: 407 MADNPFVQNALMDLYARL-------------------------------GDMEAARWIFA 435
Query: 350 SLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF-----------------VTKEGVVTDA 392
++ ++VV W L +G V + F L+ E +E VV +
Sbjct: 436 AIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNN 495
Query: 393 LILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQN 452
+ L+ LL CA+ AA GKEIH Y +R + D + S LVDMY+KCG + + +F
Sbjct: 496 VTLMTLLPGCAMLAAPAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDR 555
Query: 453 FIERDLVLYNVMIACYAHHGHEEKAILLFEEM-LEKGIKPDAVTFVAILSAFRHCGSVEM 511
+R+++ +NV+I Y HG ++AI LF+ M + KP+ VTF+A L+A H G V+
Sbjct: 556 LPKRNVITWNVLIMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDR 615
Query: 512 GEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSI-PTEEDAVILGSFLNV 570
G + F+SM ++ + P D +AC +D+ GRA +L++A + S+ P E+ SFL
Sbjct: 616 GMELFHSMKRNHGVQPTPDLHACAVDILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGA 675
Query: 571 CRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFA 630
CRL+RN L A E+L +LE + + YV L N+Y+A G W + +R +MR ++
Sbjct: 676 CRLHRNVPLGEIAAERLFQLEPDEASHYVLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEP 735
Query: 631 GCSWVYVEHEIHIFTVGDVSHPKTNAIYS 659
GCSW+ ++ IH F G+ +HP++ +++
Sbjct: 736 GCSWIELDGVIHRFMAGESAHPESTLVHA 764
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 123/450 (27%), Positives = 201/450 (44%), Gaps = 84/450 (18%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N +++A + DL A +LF++ P +D VT+NS++ AL LF A +
Sbjct: 100 NALLTAYARCGDLTAALALFNAMPSRDAVTFNSLIA-----------ALCLFRRWLPALD 148
Query: 120 HIR--------MDEFTVTSTLNLCVKLL-NVGFGRQLHAFMVKTS--NDASGFAVSSLID 168
+R + FT+ S L C L ++ GR+ HAF +K + FA ++L+
Sbjct: 149 ALRDMLLEGHPLSSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLS 208
Query: 169 MYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWN 228
MY++ ++A +F G + + S V V+WN
Sbjct: 209 MYARLGLVDDAQMLF-GSVDTTD--SPGGGV-------------------------VTWN 240
Query: 229 TLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKN 288
T++S VQ+G E +++ M GVR + TFASAL AC L + +E+H++VLK+
Sbjct: 241 TMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYVLKD 300
Query: 289 G-LISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRH 347
L +N FV+S +VD+Y E + A RR
Sbjct: 301 SDLAANSFVASALVDMYASHERVGVA-------------------------------RRV 329
Query: 348 FDSLT--EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQ 405
FD + + + +W A+ GY +A E +L + + GVV + +L ACA
Sbjct: 330 FDMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARS 389
Query: 406 AALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMI 465
+ +H Y+L+ G+ + + + L+D+Y++ G+M A IF RD+V +N +I
Sbjct: 390 ETFAGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLI 449
Query: 466 ACYAHHGHEEKAILLFEEMLEKGIKPDAVT 495
GH A L EM ++G DA T
Sbjct: 450 TGCVVQGHIHDAFQLVREMQQQGRFTDATT 479
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 100/448 (22%), Positives = 182/448 (40%), Gaps = 62/448 (13%)
Query: 17 IKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACI----KSHD- 71
+ G+ IT + S+ +L R++ + + + + N+ +++ + SH+
Sbjct: 263 VARGVRPDGITFASALPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHER 322
Query: 72 LKQARSLFDSSP--HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVT 129
+ AR +FD P H+ L +N+M+CGY A G + +AL+LF M+ A+ + E T+
Sbjct: 323 VGVARRVFDMVPGGHRQLGLWNAMVCGYAQA-GMDEEALELFARME-AEAGVVPSETTIA 380
Query: 130 STLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEE 189
L C + +H +++K + F ++L+D+Y++ E A +F E
Sbjct: 381 GVLPACARSETFAGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIF-AAIEP 439
Query: 190 VNLISKNAMVAACCREGEMEMA---LKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
+++S N ++ C +G + A ++ +Q DA + E+G+
Sbjct: 440 RDVVSWNTLITGCVVQGHIHDAFQLVREMQQQGRFTDATT--------------EDGI-- 483
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
E V N T + L C L KEIH + +++ L S+ V S +VD+Y K
Sbjct: 484 -AGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMRHALDSDIAVGSALVDMYAK 542
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
C G + +R FD L ++NV+ W L Y
Sbjct: 543 C-------------------------------GCLALSRAVFDRLPKRNVITWNVLIMAY 571
Query: 367 VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI-HAYILRMGVQM 425
+ L V + + + L AC+ + G E+ H+ GVQ
Sbjct: 572 GMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQP 631
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNF 453
L + VD+ + G + A I +
Sbjct: 632 TPDLHACAVDILGRAGRLDEAYSIITSM 659
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 162/388 (41%), Gaps = 47/388 (12%)
Query: 196 NAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGV 255
NA++ A R G++ AL F P DAV++N+LI+ L M G
Sbjct: 100 NALLTAYARCGDLTAALALFNAMPS-RDAVTFNSLIAALCLFRRWLPALDALRDMLLEGH 158
Query: 256 RWNEHTFASALSACCGL-RNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
+ T S L AC L +++ +E H++ LKNG +
Sbjct: 159 PLSSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDG--------------------- 197
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKN-----VVVWTALFSGYVKA 369
F+ ++++ Y+ G +++A+ F S+ + VV W + S V++
Sbjct: 198 --------DERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQS 249
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR-MGVQMDKK 428
C +++ + V + GV D + L AC+ L G+E+HAY+L+ + +
Sbjct: 250 GRCGEAIEVIYDMVAR-GVRPDGITFASALPACSQLEMLSLGREMHAYVLKDSDLAANSF 308
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFI--ERDLVLYNVMIACYAHHGHEEKAILLFEEM-L 485
+ S LVDMY+ + A +F R L L+N M+ YA G +E+A+ LF M
Sbjct: 309 VASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEA 368
Query: 486 EKGIKPDAVTFVAILSAFRHCGSVEM--GEKYFNSMTADYKISPETDHYACMIDLYGRAN 543
E G+ P T +L A C E G++ + ++ ++DLY R
Sbjct: 369 EAGVVPSETTIAGVLPA---CARSETFAGKEAVHGYVLKRGMADNPFVQNALMDLYARLG 425
Query: 544 QLEKAIEFMKSIPTEEDAVILGSFLNVC 571
+E A +I D V + + C
Sbjct: 426 DMEAARWIFAAI-EPRDVVSWNTLITGC 452
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 132/313 (42%), Gaps = 53/313 (16%)
Query: 7 KEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISAC 66
KEA+ H +K G+ N L+ +Y++ + +R +F + R+V SWNT+I+ C
Sbjct: 395 KEAV--HGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGC 452
Query: 67 IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEF 126
+ + A L + +G DA + +E + +
Sbjct: 453 VVQGHIHDAFQLVRE----------------MQQQGRFTDATTEDGIAGTDEEPVVPNNV 496
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
T+ + L C L G+++H + ++ + D+ S+L+DMY+KC C + VF+
Sbjct: 497 TLMTLLPGCAMLAAPAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFD-- 554
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
R P+ N ++WN LI Y +G +E + L
Sbjct: 555 ------------------------------RLPKRN-VITWNVLIMAYGMHGLGDEAIAL 583
Query: 247 FVRM-GENGVRWNEHTFASALSACCGLRNVKCAKEI-HSWVLKNGLISNPFVSSGIVDVY 304
F RM N + NE TF +AL+AC V E+ HS +G+ P + + VD+
Sbjct: 584 FDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACAVDIL 643
Query: 305 CKCENMNYAESML 317
+ ++ A S++
Sbjct: 644 GRAGRLDEAYSII 656
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 75/173 (43%), Gaps = 18/173 (10%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A++ L + L+ +Y+K L SR +FD +P+RNV +WN +I A H L
Sbjct: 518 HGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMA-YGMHGL 576
Query: 73 -KQARSLFD-------SSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
+A +LFD + P++ VT+ + L + G ++LF M+ R
Sbjct: 577 GDEAIALFDRMVMSNEAKPNE--VTFIAALAA-CSHSGMVDRGMELFHSMK------RNH 627
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYE 177
T L+ C + GR A+ + TS + VS+ CR +
Sbjct: 628 GVQPTPDLHACAVDILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLHR 680
>gi|356518523|ref|XP_003527928.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g08210-like [Glycine max]
Length = 686
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 184/635 (28%), Positives = 318/635 (50%), Gaps = 72/635 (11%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+++ ++ H +A L T+ N L+ +Y K L +++++F E+P +N SWNT+I
Sbjct: 120 DVELGMLVHQHVSEARLEFDTVLMNALLDMYVKCGSLMDAKRVFHEIPCKNSTSWNTLIL 179
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
K ++ A +LFD P DLV++NS++ G A+ AL+ M + +++D
Sbjct: 180 GHAKQGLMRDAFNLFDQMPEPDLVSWNSIIAGL--ADNASPHALQFLSMMHG--KGLKLD 235
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
FT L C L + GRQ+H ++K+ + S + +SSLIDMYS C+ +EA ++F+
Sbjct: 236 AFTFPCALKACGLLGELTMGRQIHCCIIKSGLECSCYCISSLIDMYSNCKLLDEAMKIFD 295
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
KN+ P WN+++SGYV NGD L
Sbjct: 296 ----------KNS---------------------PLAESLAVWNSMLSGYVANGDWWRAL 324
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
+ M +G +++ +TF+ AL C N++ A ++H ++ G + V S ++D+Y
Sbjct: 325 GMIACMHHSGAQFDSYTFSIALKVCIYFDNLRLASQVHGLIITRGYELDHVVGSILIDLY 384
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
K QGN+ A R F+ L K+VV W++L
Sbjct: 385 AK-------------------------------QGNINSALRLFERLPNKDVVAWSSLIV 413
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
G + +F L + V + + D +L I+L + A+L GK+IH++ L+ G +
Sbjct: 414 GCARLGLGTLVFSLFMDMVHLD-LEIDHFVLSIVLKVSSSLASLQSGKQIHSFCLKKGYE 472
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
++ + + L DMY+KCG + A +F E D + + +I A +G +KAI + +M
Sbjct: 473 SERVITTALTDMYAKCGEIEDALALFDCLYEIDTMSWTGIIVGCAQNGRADKAISILHKM 532
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
+E G KP+ +T + +L+A RH G VE F S+ ++ ++P +HY CM+D++ +A +
Sbjct: 533 IESGTKPNKITILGVLTACRHAGLVEEAWTIFKSIETEHGLTPCPEHYNCMVDIFAKAGR 592
Query: 545 LEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANV 604
++A + +P + D I S L+ C +N LA E LL + + Y+ L+NV
Sbjct: 593 FKEARNLINDMPFKPDKTIWCSLLDACGTYKNRHLANIVAEHLLATSPEDASVYIMLSNV 652
Query: 605 YAAEGNWAEMGRIRKQMR--GMKGNRFAGCSWVYV 637
YA+ G W + ++R+ +R G+KG AG SW+ +
Sbjct: 653 YASLGMWDNLSKVREAVRKVGIKG---AGKSWIEI 684
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 110/455 (24%), Positives = 208/455 (45%), Gaps = 46/455 (10%)
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
MD + L C + + + LH+ ++K F ++S+I +Y+KC +++A +
Sbjct: 1 MDLNQIQLALRCCGRFQAIKHAKSLHSLIIKLGLSNHIFLLNSIISVYAKCSRFDDARTL 60
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
F+ P N VS+ T++S + +G E
Sbjct: 61 FD--------------------------------EMPHRN-IVSFTTMVSAFTNSGRPHE 87
Query: 243 GLKLFVRMGEN-GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
L L+ M E+ V+ N+ +++ L AC + +V+ +H V + L + + + ++
Sbjct: 88 ALTLYNHMLESKTVQPNQFLYSAVLKACGLVGDVELGMLVHQHVSEARLEFDTVLMNALL 147
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D+Y KC ++ A+ + +NS S +++I+G++ QG M +A FD + E ++V W +
Sbjct: 148 DMYVKCGSLMDAKRVFHEIPCKNSTSWNTLILGHAKQGLMRDAFNLFDQMPEPDLVSWNS 207
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+ +G + AL L + +G+ DA L AC L L G++IH I++
Sbjct: 208 IIAGLADNASPHALQFL--SMMHGKGLKLDAFTFPCALKACGLLGELTMGRQIHCCIIKS 265
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQ--NFIERDLVLYNVMIACYAHHGHEEKAIL 479
G++ IS+L+DMYS C + A IF + + L ++N M++ Y +G +A+
Sbjct: 266 GLECSCYCISSLIDMYSNCKLLDEAMKIFDKNSPLAESLAVWNSMLSGYVANGDWWRALG 325
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFN-SMTADYKISPETDHY--ACMI 536
+ M G + D+ TF L + ++ + + +T Y E DH + +I
Sbjct: 326 MIACMHHSGAQFDSYTFSIALKVCIYFDNLRLASQVHGLIITRGY----ELDHVVGSILI 381
Query: 537 DLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVC 571
DLY + + A+ + +P +D V S + C
Sbjct: 382 DLYAKQGNINSALRLFERLP-NKDVVAWSSLIVGC 415
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 193/658 (29%), Positives = 317/658 (48%), Gaps = 103/658 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
HV+ ++AGL T N LI +Y+K +R++R++FD M R+ SW T+ A +S
Sbjct: 152 HVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAES--- 208
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
GY ++LK + M E +R T + L
Sbjct: 209 -----------------------------GYGEESLKTYHAM--LQERVRPSRITYMNVL 237
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C L + G+Q+HA +V++ + ++L MY KC +++A VFE C ++
Sbjct: 238 SACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFE-CLSYRDV 296
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
I+ N M+ G+V +G EE F RM E
Sbjct: 297 IAWNTMI--------------------------------RGFVDSGQLEEAHGTFHRMLE 324
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
GV + T+ + LSAC + KEIH+ K+GL+S+ + ++++Y K
Sbjct: 325 EGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKA----- 379
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G+M++AR+ FD + +++VV WT L Y +C
Sbjct: 380 --------------------------GSMKDARQVFDRMPKRDVVSWTTLLGRYA---DC 410
Query: 373 EALFDLLSEF--VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
+ + + + F + ++GV + + + +L AC+ AL GKEIHA +++ G+ D +
Sbjct: 411 DQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVT 470
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+ L+ MY KCG++ A +F+ RD+V +N +I +G +A+ +E M +G++
Sbjct: 471 NALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMR 530
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
P+A TFV +LSA R C VE G + F M+ DY I P HYACM+D+ RA L +A +
Sbjct: 531 PNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAED 590
Query: 551 FMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGN 610
+ +IP + A + G+ L CR++ N E+ A E L+LE N YV L+ +YAA G
Sbjct: 591 VILTIPLKPSAAMWGALLAACRIHCNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGM 650
Query: 611 WAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
W ++ ++RK M+ + G SW+ + E+H F D SHP+T IY+ L ++
Sbjct: 651 WRDVAKLRKFMKERGVKKEPGRSWIEIAGEVHSFVARDQSHPRTQEIYAELETLKKQM 708
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 124/450 (27%), Positives = 211/450 (46%), Gaps = 72/450 (16%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
NV+ NT++ + +AR LFD +K +V++N M+ GY + G +A LF M
Sbjct: 62 NVYITNTLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAH-RGLAQEAFNLFTLM 120
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKT--SNDASGFAVSSLIDMYSK 172
Q E + D+FT S L+ C + +GR++H +++ +ND + ++LI MY+K
Sbjct: 121 QQ--ERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTT--VGNALISMYAK 176
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C +A RVF +AM + D VSW TL
Sbjct: 177 CGSVRDARRVF------------DAMAS---------------------RDEVSWTTLTG 203
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
Y ++G EE LK + M + VR + T+ + LSAC L ++ K+IH+ ++++ S
Sbjct: 204 AYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHS 263
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
+ VS+ + +Y KC G ++AR F+ L+
Sbjct: 264 DVRVSTALTKMYMKC-------------------------------GAFKDAREVFECLS 292
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
++V+ W + G+V + E + +EGV D +L ACA L GK
Sbjct: 293 YRDVIAWNTMIRGFVDSGQLEEAHGTFHRML-EEGVAPDRATYTTVLSACARPGGLARGK 351
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
EIHA + G+ D + + L++MYSK G+M A +F +RD+V + ++ YA
Sbjct: 352 EIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCD 411
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
++ F++ML++G+K + +T++ +L A
Sbjct: 412 QVVESFTTFKQMLQQGVKANKITYMCVLKA 441
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 191/438 (43%), Gaps = 66/438 (15%)
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
++D + L CVK ++ G+Q+H +++ + + ++L+ +Y+ C EA +
Sbjct: 25 QVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQ 84
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F+ + + VSWN +ISGY G A+
Sbjct: 85 LFDKFSNK---------------------------------SVVSWNVMISGYAHRGLAQ 111
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E LF M + + ++ TF S LSAC + +EIH V++ GL ++ V + ++
Sbjct: 112 EAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALI 171
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
+Y KC G++ +ARR FD++ ++ V WT
Sbjct: 172 SMYAKC-------------------------------GSVRDARRVFDAMASRDEVSWTT 200
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
L Y ++ E + +E V + + +L AC AAL GK+IHA+I+
Sbjct: 201 LTGAYAESGYGEESLKTYHAML-QERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVES 259
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
D ++ + L MY KCG A +F+ RD++ +N MI + G E+A F
Sbjct: 260 EYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTF 319
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGR 541
MLE+G+ PD T+ +LSA G + G++ D +S + +I++Y +
Sbjct: 320 HRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVS-DVRFGNALINMYSK 378
Query: 542 ANQLEKAIEFMKSIPTEE 559
A ++ A + +P +
Sbjct: 379 AGSMKDARQVFDRMPKRD 396
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 128/263 (48%), Gaps = 35/263 (13%)
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
G + + + + L +C +++ K++H +L+ G+ N ++++ ++ +Y C
Sbjct: 21 RKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHC---- 76
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
G++ EAR+ FD + K+VV W + SGY
Sbjct: 77 ---------------------------GSVNEARQLFDKFSNKSVVSWNVMISGYAHRGL 109
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
+ F+L + + +E + D V +L AC+ A L+ G+EIH ++ G+ D + +
Sbjct: 110 AQEAFNLFT-LMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGN 168
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
L+ MY+KCG++ A +F RD V + + YA G+ E+++ + ML++ ++P
Sbjct: 169 ALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRP 228
Query: 492 DAVTFVAILSAFRHCGSVEMGEK 514
+T++ +LSA CGS+ EK
Sbjct: 229 SRITYMNVLSA---CGSLAALEK 248
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 80/129 (62%), Gaps = 1/129 (0%)
Query: 374 ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL 433
A D+L +++ ++G D+ V LL +C L GK++H +ILR GV+ + + +TL
Sbjct: 11 APADVL-QYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTL 69
Query: 434 VDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDA 493
+ +Y+ CG++ A +F F + +V +NVMI+ YAH G ++A LF M ++ ++PD
Sbjct: 70 LKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDK 129
Query: 494 VTFVAILSA 502
TFV+ILSA
Sbjct: 130 FTFVSILSA 138
>gi|125539877|gb|EAY86272.1| hypothetical protein OsI_07642 [Oryza sativa Indica Group]
Length = 596
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 187/566 (33%), Positives = 302/566 (53%), Gaps = 23/566 (4%)
Query: 127 TVTSTLNLCVKLLNVG----FGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
TV + L L + ++ G G +HA +VKT+ + L+ +Y+ +
Sbjct: 27 TVEAVLALLERAISAGDVRRLGAAVHALLVKTALTHHTLLSNRLVALYALLPTPAASLAA 86
Query: 183 FEGCTEEVNLISKNAMVAACCR-EGEMEMALKTFWRQPELN-DAVSWNTLISGYVQNGDA 240
F+ + N S N+++AA R G + AL+ P + + VS+NT+IS ++G
Sbjct: 87 FDDLPHK-NAHSYNSLLAALARGRGTLPDALRLLDGMPPASRNVVSYNTVISSLARHGRE 145
Query: 241 EEGLKLFVRM------GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
E L++F ++ G+ V + T SA SAC GLR+ + +E+H V+ +G+
Sbjct: 146 SEALRVFAQLARDRGLGQQQVAIDRFTVVSAASACAGLRDARHLRELHGAVVVSGMEVTV 205
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
+++ +VD Y K + A + +R+S S +SMI GY +++A + FD + +
Sbjct: 206 IMANAMVDAYSKAGRVEDARGLFDQMTIRDSVSWTSMIAGYCRASMLDDAVQVFDMMPAQ 265
Query: 355 NVVVWTALFSGYVKAQNCEALFDL-LSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
+ + WTAL SG+ QN E L L E +T EGVV LV LGACA + GKE
Sbjct: 266 DAIAWTALISGH--EQNGEEEIALELFERMTGEGVVPTPFALVSCLGACAKVGLVARGKE 323
Query: 414 IHAYILRMGVQMDKKLI---STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
+H +ILR + D + + L+DMYSKCG+M A +F +ERD++ +N M+ ++H
Sbjct: 324 VHGFILRRSIGSDPFNVFIHNALIDMYSKCGDMVAAMAVFDRMLERDIISWNSMVTGFSH 383
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD 530
+G ++++ +FE ML+ ++P VTF+A+L+A H G V G + SM D+ + P +
Sbjct: 384 NGQGKQSLAVFERMLKDEVQPTYVTFLAVLTACSHAGLVSDGRRILESMQ-DHGVEPRAE 442
Query: 531 HYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSF---LNVCRLNRNAELAGEAEEKL 587
HYA ID GR +QLE+A EF+K + ++ GS+ L C ++ N E+A E E L
Sbjct: 443 HYAAFIDALGRNHQLEEASEFIKGLSSKIGLGTTGSWGALLGACHVHGNIEIAEEVAEAL 502
Query: 588 LRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVG 647
+LE N RYV L+N+Y+A G W + ++R M+G + SW+ V+ H+F
Sbjct: 503 FQLEPENSGRYVMLSNIYSAAGQWDDARQVRALMKGKGLRKDQAYSWIEVQRAKHMFVAD 562
Query: 648 DVSHPKTNAIYSVLAIFTGELYEIAG 673
D SH + N IY +L ++ I G
Sbjct: 563 DTSHHEANEIYEMLDKLFHHMFIIGG 588
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 186/355 (52%), Gaps = 13/355 (3%)
Query: 12 CHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHD 71
H +K LT T+ +N+L+ +Y+ S FD++P +N S+N++++A +
Sbjct: 51 VHALLVKTALTHHTLLSNRLVALYALLPTPAASLAAFDDLPHKNAHSYNSLLAALARGRG 110
Query: 72 -LKQARSLFDSSP--HKDLVTYNSMLCGYINAEGYEADALKLFIEMQS----ADEHIRMD 124
L A L D P +++V+YN+++ + G E++AL++F ++ + + +D
Sbjct: 111 TLPDALRLLDGMPPASRNVVSYNTVISS-LARHGRESEALRVFAQLARDRGLGQQQVAID 169
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
FTV S + C L + R+LH +V + + + ++++D YSK E+A +F+
Sbjct: 170 RFTVVSAASACAGLRDARHLRELHGAVVVSGMEVTVIMANAMVDAYSKAGRVEDARGLFD 229
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
T + +S +M+A CR ++ A++ F P DA++W LISG+ QNG+ E L
Sbjct: 230 QMTIR-DSVSWTSMIAGYCRASMLDDAVQVFDMMPA-QDAIAWTALISGHEQNGEEEIAL 287
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP---FVSSGIV 301
+LF RM GV S L AC + V KE+H ++L+ + S+P F+ + ++
Sbjct: 288 ELFERMTGEGVVPTPFALVSCLGACAKVGLVARGKEVHGFILRRSIGSDPFNVFIHNALI 347
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNV 356
D+Y KC +M A ++ R+ S +SM+ G+S G +++ F+ + + V
Sbjct: 348 DMYSKCGDMVAAMAVFDRMLERDIISWNSMVTGFSHNGQGKQSLAVFERMLKDEV 402
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 149/321 (46%), Gaps = 41/321 (12%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + +G+ +T I N ++ YSK + ++R LFD+M R+ SW ++I+ ++ L
Sbjct: 193 HGAVVVSGMEVTVIMANAMVDAYSKAGRVEDARGLFDQMTIRDSVSWTSMIAGYCRASML 252
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
A +FD P +D + + +++ G+ G E AL+LF M E + F + S L
Sbjct: 253 DDAVQVFDMMPAQDAIAWTALISGH-EQNGEEEIALELFERMTG--EGVVPTPFALVSCL 309
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAV---SSLIDMYSKCRCYEEACRVFEGCTEE 189
C K+ V G+++H F+++ S + F V ++LIDMYSKC
Sbjct: 310 GACAKVGLVARGKEVHGFILRRSIGSDPFNVFIHNALIDMYSKC---------------- 353
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
G+M A+ F R E D +SWN++++G+ NG ++ L +F R
Sbjct: 354 ----------------GDMVAAMAVFDRMLE-RDIISWNSMVTGFSHNGQGKQSLAVFER 396
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
M ++ V+ TF + L+AC V + I + +G+ + +D + N
Sbjct: 397 MLKDEVQPTYVTFLAVLTACSHAGLVSDGRRILESMQDHGVEPRAEHYAAFIDALGR--N 454
Query: 310 MNYAESMLLLKGVRNSFSISS 330
E+ +KG+ + + +
Sbjct: 455 HQLEEASEFIKGLSSKIGLGT 475
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 202/664 (30%), Positives = 316/664 (47%), Gaps = 78/664 (11%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +G N L+ +Y + +R++FDEM ER V
Sbjct: 149 HAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGV---------------- 192
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
DLV++NS++ Y+ G A+K+F E + D IR D ++ + L
Sbjct: 193 ------------GDLVSWNSIVAAYMQG-GDSIRAMKMF-ERMTEDLGIRPDAVSLVNVL 238
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C + G+Q+H + +++ F ++++DMY+KC EEA +VFE + ++
Sbjct: 239 PACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVK-DV 297
Query: 193 ISKNAMVAACCREGEMEMALKTFWR----QPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
+S NAMV + G + AL F + + ELN V+W+ +I+GY Q G E L +F
Sbjct: 298 VSWNAMVTGYSQIGRFDDALGLFEKIREEKIELN-VVTWSAVIAGYAQRGLGFEALDVFR 356
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCAKEIH----SWVL---KNGLISNPFVSSGIV 301
+M G N T S LS C + KE H W+L +N + V + ++
Sbjct: 357 QMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALI 416
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKN--VVVW 359
D+Y KC++ A +M FD + K+ VV W
Sbjct: 417 DMYSKCKSPKAARAM-------------------------------FDLIPPKDRSVVTW 445
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEG-VVTDALILVILLGACALQAALHPGKEIHAYI 418
T L G + +L S+ + + V+ +A + L ACA AL G++IHAY+
Sbjct: 446 TVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYV 505
Query: 419 LRMGVQMDKKLIST-LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
LR + ++ L+DMYSK G++ A ++F N +R+ V + ++ Y HG E+A
Sbjct: 506 LRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEA 565
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID 537
+ +F EM + G+ PD VTFV +L A H G V+ G YFN M D+ + P +HYACM+D
Sbjct: 566 LQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVD 625
Query: 538 LYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKAR 597
L RA +L++A+E ++ +P + + + L+ CR+ N EL A +LL LE N
Sbjct: 626 LLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGS 685
Query: 598 YVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
Y L+N+YA W ++ RIR M+ + GCSWV F GD SHP + I
Sbjct: 686 YTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQI 745
Query: 658 YSVL 661
Y +L
Sbjct: 746 YDLL 749
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/466 (28%), Positives = 224/466 (48%), Gaps = 55/466 (11%)
Query: 102 GYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGF 161
G+ D L+L+ MQ R D +T L C ++ + G +HA + + + + F
Sbjct: 105 GFLEDVLQLYRRMQRLG--WRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVF 162
Query: 162 AVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPEL 221
+ L+ MY +C +E A +VF+ EM R+ +
Sbjct: 163 VGNGLVSMYGRCGAWENARQVFD------------------------EM------RERGV 192
Query: 222 NDAVSWNTLISGYVQNGDAEEGLKLFVRMGEN-GVRWNEHTFASALSACCGLRNVKCAKE 280
D VSWN++++ Y+Q GD+ +K+F RM E+ G+R + + + L AC + K+
Sbjct: 193 GDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQ 252
Query: 281 IHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGN 340
+H + L++GL + FV + +VD+Y KC M A + V++ S ++M+ GYS G
Sbjct: 253 VHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGR 312
Query: 341 MEEARRHFDSLTEK----NVVVWTALFSGYV-KAQNCEAL--FDLLSEFVTKEGVVTDAL 393
++A F+ + E+ NVV W+A+ +GY + EAL F + ++ VVT
Sbjct: 313 FDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVT--- 369
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKK-------LISTLVDMYSKCGNMTYA 446
LV LL CAL L GKE H + ++ + +D+ +I+ L+DMYSKC + A
Sbjct: 370 -LVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAA 428
Query: 447 EIIFQNFIERD--LVLYNVMIACYAHHGHEEKAILLFEEMLEKG--IKPDAVTFVAILSA 502
+F +D +V + V+I A HG +A+ LF +ML+ + P+A T L A
Sbjct: 429 RAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMA 488
Query: 503 FRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
G++ G + + + S C+ID+Y ++ ++ A
Sbjct: 489 CARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAA 534
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 140/293 (47%), Gaps = 34/293 (11%)
Query: 218 QPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKC 277
P + WN LI V G E+ L+L+ RM G R + +TF L AC + + +C
Sbjct: 85 HPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRC 144
Query: 278 AKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSL 337
+H+ V +G N FV +G+V +Y +C
Sbjct: 145 GASVHAVVFASGFEWNVFVGNGLVSMYGRC------------------------------ 174
Query: 338 QGNMEEARRHFDSLTEKNV---VVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALI 394
G E AR+ FD + E+ V V W ++ + Y++ + + G+ DA+
Sbjct: 175 -GAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVS 233
Query: 395 LVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFI 454
LV +L ACA A GK++H Y LR G+ D + + +VDMY+KCG M A +F+
Sbjct: 234 LVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMK 293
Query: 455 ERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCG 507
+D+V +N M+ Y+ G + A+ LFE++ E+ I+ + VT+ A+++ + G
Sbjct: 294 VKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRG 346
>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g40720-like [Vitis vinifera]
Length = 854
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 181/619 (29%), Positives = 319/619 (51%), Gaps = 72/619 (11%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
+++ N +++ + L+ + LF+S P++D +NSM+ Y A G +A+ LFI M
Sbjct: 289 DLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYA-AFGCHEEAMDLFIRM 347
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLN-VGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKC 173
QS E ++ DE TV L++C +L + + G+ LHA ++K+ ++L+ MY++
Sbjct: 348 QS--EGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTEL 405
Query: 174 RCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISG 233
C E ++F+ + + D +SWNT+I
Sbjct: 406 NCVESVQKIFD---------------------------------RMKGVDIISWNTMILA 432
Query: 234 YVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISN 293
+N + +LF RM E+ ++ N +T S L+AC + + + IH +V+K+ + N
Sbjct: 433 LARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEIN 492
Query: 294 PFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
+ + + D+Y C G+ AR F+ +
Sbjct: 493 QPLRTALADMYMNC-------------------------------GDEATARDLFEGCPD 521
Query: 354 KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
++++ W A+ + YVK L +++ +++ ++ +L + A L G+
Sbjct: 522 RDLISWNAMIASYVKNNQAHKALLLFHRMISE--AEPNSVTIINVLSSFTHLATLPQGQS 579
Query: 414 IHAYILRMG--VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
+HAY+ R G + +D L + + MY++CG++ AE IF+ +R+++ +N MIA Y +
Sbjct: 580 LHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMN 639
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH 531
G A+L F +MLE G +P+ VTFV++LSA H G +EMG + F+SM D+ ++PE H
Sbjct: 640 GRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVH 699
Query: 532 YACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLE 591
Y+C++DL R +++A EF+ S+P E DA + + L+ CR +A+ A EKL +LE
Sbjct: 700 YSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLE 759
Query: 592 GNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSH 651
N YV L+NVYA G W E+ RIR ++ + G SW+ V++++H F+ GD SH
Sbjct: 760 PMNAGNYVLLSNVYATAGLWLEVRRIRTWLKEKGLRKPPGISWIIVKNQVHCFSAGDRSH 819
Query: 652 PKTNAIYSVLAIFTGELYE 670
P+++ IY+ L+I + E
Sbjct: 820 PQSDKIYAKLSILLSSMRE 838
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 202/444 (45%), Gaps = 71/444 (15%)
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
++ AR +FD+ +D+V +N+M+ GY+ YE +A+ L EM E++R + T+ +
Sbjct: 104 VEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYE-EAMLLVREM--GRENLRPNSRTMVAL 160
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSN-DASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L C + GR +H + ++ D++ ++LI Y +
Sbjct: 161 LLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLRF----------------- 203
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
+M + L + + + VSWN +ISGY GD + L+LFV+M
Sbjct: 204 ----------------DMRV-LPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQM 246
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
+ V+++ T A+ AC L ++K K+IH +K
Sbjct: 247 LVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIK----------------------F 284
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
+ E + +L + N YS G++E + + F+S+ ++ +W ++ S Y
Sbjct: 285 EFVEDLYILNALLNM---------YSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFG 335
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGAC-ALQAALHPGKEIHAYILRMGVQMDKKL 429
E DL + EGV D +VI+L C L + L GK +HA++++ G+++D L
Sbjct: 336 CHEEAMDLFIR-MQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASL 394
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+ L+ MY++ + + IF D++ +N MI A + +A LFE M E I
Sbjct: 395 GNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEI 454
Query: 490 KPDAVTFVAILSAFRHCGSVEMGE 513
KP++ T ++IL+A ++ G
Sbjct: 455 KPNSYTIISILAACEDVTCLDFGR 478
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 163/364 (44%), Gaps = 39/364 (10%)
Query: 210 MALKTFWRQP---ELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASAL 266
M L+ P ++ D WN++I + + L + +M GV N T L
Sbjct: 1 MGLQRLTLSPTKIQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVL 60
Query: 267 SACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSF 326
AC V+ K IH + L+ + V + +VD YCKC
Sbjct: 61 KACAAQNAVERGKSIHRSIQGTDLMDDVRVGTAVVDFYCKC------------------- 101
Query: 327 SISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKE 386
G +E+AR FD++++++VV+W A+ GYV C LL + +E
Sbjct: 102 ------------GFVEDARCVFDAMSDRDVVLWNAMVYGYV-GWGCYEEAMLLVREMGRE 148
Query: 387 GVVTDALILVILLGACALQAALHPGKEIHAYILRMGV-QMDKKLISTLVDMYSKCGNMTY 445
+ ++ +V LL AC + L G+ +H Y LR G+ + + + L+ Y + +M
Sbjct: 149 NLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLRF-DMRV 207
Query: 446 AEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRH 505
++F + R++V +N MI+ Y G KA+ LF +ML +K D VT + + A
Sbjct: 208 LPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAE 267
Query: 506 CGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILG 565
GS+++G K + + ++ + ++++Y LE + + +S+P DA +
Sbjct: 268 LGSLKLG-KQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPN-RDAPLWN 325
Query: 566 SFLN 569
S ++
Sbjct: 326 SMIS 329
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 118/517 (22%), Positives = 217/517 (41%), Gaps = 104/517 (20%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H IK+G+ + N L+ +Y++ N + +K+FD M ++ SWNT+I L
Sbjct: 380 HAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMI--------L 431
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
AR+ A A +LF M+ ++ I+ + +T+ S L
Sbjct: 432 ALARNTL------------------------RAQACELFERMRESE--IKPNSYTIISIL 465
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C + + FGR +H +++K S + + ++L DMY C A +FEGC + +L
Sbjct: 466 AACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDR-DL 524
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
IS NAM+A+ YV+N A + L LF RM
Sbjct: 525 ISWNAMIAS--------------------------------YVKNNQAHKALLLFHRMIS 552
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL-------ISNPFVSSGIVDVYC 305
N T + LS+ L + + +H++V + G ++N F++ +Y
Sbjct: 553 EA-EPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFIT-----MYA 606
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE----KNVVVWTA 361
+C ++ AE++ RN S ++MI GY + G +A F + E N V + +
Sbjct: 607 RCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVS 666
Query: 362 LF-----SGYVKAQNCEALFDLLSEF-VTKEGVVTDALILVILLGACALQAALHPGKEIH 415
+ SG+++ + ++ +F VT E V ++ ++ G C E
Sbjct: 667 VLSACSHSGFIE-MGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCI--------DEAR 717
Query: 416 AYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLV---LYNVMIACYAHHG 472
+I M ++ D + L+ + A+ IF+ + + + Y ++ YA G
Sbjct: 718 EFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLSNVYATAG 777
Query: 473 HEEKAILLFEEMLEKGI-KPDAVTFVAILSAFRHCGS 508
+ + + EKG+ KP ++++ + + HC S
Sbjct: 778 LWLEVRRIRTWLKEKGLRKPPGISWIIVKNQV-HCFS 813
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 199/647 (30%), Positives = 318/647 (49%), Gaps = 101/647 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A+K GL L +N LI++Y K LR+ F +
Sbjct: 338 HCMALKLGLDLMLTVSNSLINMYCK---LRK-------------FGF------------- 368
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
AR++FD+ +DL+++NS++ G I G E +A+ LF+++ ++ D++T+TS L
Sbjct: 369 --ARTVFDNMSERDLISWNSVIAG-IAQNGLEVEAVCLFMQLLRCG--LKPDQYTMTSVL 423
Query: 133 NLCVKLL-NVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L + +Q+H +K +N + F ++LID YS+ RC +EA +FE
Sbjct: 424 KAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER------ 477
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
F D V+WN +++GY Q+ D + LKLF M
Sbjct: 478 ---------------------HNF-------DLVAWNAMMAGYTQSHDGHKTLKLFALMH 509
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
+ G R ++ T A+ C L + K++H++ +K+G + +VSSGI+D+Y KC
Sbjct: 510 KQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKC---- 565
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
G+M A+ FDS+ + V WT + SG ++
Sbjct: 566 ---------------------------GDMSAAQFAFDSIPVPDDVAWTTMISGCIENGE 598
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
E F + S+ + GV+ D + L A + AL G++IHA L++ D + +
Sbjct: 599 EERAFHVFSQ-MRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGT 657
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
+LVDMY+KCG++ A +F+ ++ +N M+ A HG ++ + LF++M GIKP
Sbjct: 658 SLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKP 717
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
D VTF+ +LSA H G V K+ SM DY I PE +HY+C+ D GRA +++A
Sbjct: 718 DKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENL 777
Query: 552 MKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNW 611
++S+ E A + + L CR+ + E KLL LE + + YV L+N+YAA W
Sbjct: 778 IESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKW 837
Query: 612 AEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
EM R M+G K + G SW+ V+++IHIF V D S+ +T IY
Sbjct: 838 DEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIY 884
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 139/567 (24%), Positives = 241/567 (42%), Gaps = 105/567 (18%)
Query: 48 FDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINA-----EG 102
F+E PER F N +IS K L AR +FD P +DLV++NS+L Y + E
Sbjct: 68 FEENPER--FLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVEN 125
Query: 103 YEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFA 162
+ L I Q RM T++ L LC+ V H + K D F
Sbjct: 126 IQQAFLLFRILRQDVVYTSRM---TLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFV 182
Query: 163 VSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMA--LKTFWRQPE 220
+L+++Y K +E +FE +++ N M+ A G E A L + +
Sbjct: 183 AGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSG 241
Query: 221 L-----------------------------NDAVSWNTLI------SGYVQNGDAEEGLK 245
L NDA S + +I S Y+ +G LK
Sbjct: 242 LNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLK 301
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
F M E+ V ++ TF L+ + ++ +++H LK GL VS+ ++++YC
Sbjct: 302 CFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYC 361
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
K +A ++ FD+++E++++ W ++ +G
Sbjct: 362 KLRKFGFARTV-------------------------------FDNMSERDLISWNSVIAG 390
Query: 366 YVKAQN---CEALFDLLSEFVTKEGVVTDALILV-ILLGACALQAALHPGKEIHAYILRM 421
AQN EA+ + + + G+ D + +L A +L L K++H + +++
Sbjct: 391 I--AQNGLEVEAVCLFMQ--LLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKI 446
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQ--NFIERDLVLYNVMIACY--AHHGHEEKA 477
D + + L+D YS+ M AEI+F+ NF DLV +N M+A Y +H GH K
Sbjct: 447 NNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF---DLVAWNAMMAGYTQSHDGH--KT 501
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCG---SVEMGEK-YFNSMTADYKISPETDHYA 533
+ LF M ++G + D T + F+ CG ++ G++ + ++ + Y + +
Sbjct: 502 LKLFALMHKQGERSDDFTLATV---FKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS--S 556
Query: 534 CMIDLYGRANQLEKAIEFMKSIPTEED 560
++D+Y + + A SIP +D
Sbjct: 557 GILDMYVKCGDMSAAQFAFDSIPVPDD 583
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 169/403 (41%), Gaps = 77/403 (19%)
Query: 143 FGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAAC 202
G+ HA ++ + F +++LI MYSKC
Sbjct: 57 LGKCTHARILTFEENPERFLINNLISMYSKC----------------------------- 87
Query: 203 CREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA-----EEGLKLFVRMGENGVRW 257
G + A + F + P+ D VSWN++++ Y Q+ + ++ LF + ++ V
Sbjct: 88 ---GSLTYARRVFDKMPD-RDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYT 143
Query: 258 NEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC---------- 307
+ T + L C V ++ H + K GL + FV+ +V++Y K
Sbjct: 144 SRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLF 203
Query: 308 ENMNYAESML---LLKGV------RNSFSISSMIVGYSLQGNMEEAR------------- 345
E M Y + +L +LK + +SS L N R
Sbjct: 204 EEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAG 263
Query: 346 --RHF----DSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILL 399
+ F D+ + ++ S Y+ + AL ++ V + V D + +++L
Sbjct: 264 QVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESD-VECDQVTFILML 322
Query: 400 GACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLV 459
+L G+++H L++G+ + + ++L++MY K +A +F N ERDL+
Sbjct: 323 ATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLI 382
Query: 460 LYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
+N +IA A +G E +A+ LF ++L G+KPD T ++L A
Sbjct: 383 SWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKA 425
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 19/135 (14%)
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
GK HA IL ++ LI+ L+ MYSKCG++TYA +F +RDLV +N ++A YA
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 471 HG-----HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKI 525
+ ++A LLF + + + +T +L H G V E +
Sbjct: 118 SSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHG-------- 169
Query: 526 SPETDHYACMIDLYG 540
YAC I L G
Sbjct: 170 ------YACKIGLDG 178
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 186/594 (31%), Positives = 306/594 (51%), Gaps = 45/594 (7%)
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
L A S+F++ P + + +N M G+ + ALKL++ M S + + FT
Sbjct: 25 LPYAISVFETIPEPNQLIWNIMFRGHALSSD-PVSALKLYVVMISLG--LLPNFFTFPFL 81
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L C K G+Q+H ++K D + +SLI MY++ E+A +VF+ + +
Sbjct: 82 LKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHR-D 140
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
++S A++ G +E A K F P + D VSWN +ISGY + G+ ++ L+LF M
Sbjct: 141 VVSYTALITGYASRGYIESAQKMFDEIP-IKDVVSWNAMISGYAETGNYKKALELFKEMM 199
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
+ V+ +E T A+ +SAC +++ +++HSW+ +G SN + + ++D+Y KC
Sbjct: 200 KTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKC---- 255
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
G +E A + L+ K+V+ W L GY
Sbjct: 256 ---------------------------GEVETACELLEGLSNKDVISWNTLIGGYTHMNL 288
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR----MGVQMDK 427
+ L E + + G + + ++ +L ACA A+ G+ IH YI + + V
Sbjct: 289 YKEALLLFQEML-RSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNAS 347
Query: 428 KLISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
L ++L+DMY+KCG++ A ++ + R L +N MI +A HG A +F M +
Sbjct: 348 SLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRK 407
Query: 487 KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLE 546
GI+PD +TFV +LSA H G +++G F SM DY I+P+ +HY CMIDL G + +
Sbjct: 408 NGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFK 467
Query: 547 KAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYA 606
+A E + ++P E D VI S L C+++ N EL +KL+++E N YV L+N+YA
Sbjct: 468 EAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPENPGSYVLLSNIYA 527
Query: 607 AEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
G W E+ +IR + +GMK + GCS + ++ +H F +GD HP+ IY
Sbjct: 528 TAGKWNEVXKIRTLLNDKGMK-KKVPGCSSIEIDSVVHEFIIGDKLHPQNREIY 580
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 140/556 (25%), Positives = 245/556 (44%), Gaps = 115/556 (20%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
+S KE H +K G L LI +Y+++ L +++K+FD R+V S+
Sbjct: 87 KSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTA 146
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I+ ++ A+ +FD P KD+V++N+M+ GY Y+ AL+LF EM + +
Sbjct: 147 LITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKK-ALELFKEMMKTN--V 203
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+ DE T+ + ++ C + ++ GRQ+H+++ ++ V++LID+YSKC E AC
Sbjct: 204 KPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACE 263
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+ EG + + D +SWNTLI GY +
Sbjct: 264 LLEGLSNK---------------------------------DVISWNTLIGGYTHMNLYK 290
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWV---LKNGLISN-PFVS 297
E L LF M +G N+ T S L AC L + + IH ++ LK +++N +
Sbjct: 291 EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLR 350
Query: 298 SGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT-EKNV 356
+ ++D+Y KC G+++ A + DS +++
Sbjct: 351 TSLIDMYAKC-------------------------------GDIDAAPQVSDSSAFNRSL 379
Query: 357 VVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHA 416
W A+ G+ A FD+ S + K G+ D + V LL AC+ H+
Sbjct: 380 STWNAMIFGFAMHGRANAAFDIFSR-MRKNGIEPDDITFVGLLSACS-----------HS 427
Query: 417 YILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
+L +G + + ++ Y+ I L Y MI H G ++
Sbjct: 428 GMLDLG----RNIFRSMRQDYN---------------ITPKLEHYGCMIDLLGHSGLFKE 468
Query: 477 AILLFEEMLEK-GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD-HYAC 534
A EEM+ ++PD V + ++L A + G++E+GE + + KI PE Y
Sbjct: 469 A----EEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLI---KIEPENPGSYVL 521
Query: 535 MIDLY---GRANQLEK 547
+ ++Y G+ N++ K
Sbjct: 522 LSNIYATAGKWNEVXK 537
>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 205/660 (31%), Positives = 330/660 (50%), Gaps = 91/660 (13%)
Query: 16 AIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA-CIKSHDLKQ 74
A +A TT + N L+ Y ++ L + LF MP R++ S+N +IS ++ L
Sbjct: 39 AFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISGLSLRRQTLPD 98
Query: 75 ARSLFDSSP-HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLN 133
A + S P +V++ S+L GY+ G ADA++LF +M + H+ +TV
Sbjct: 99 AAAALASIPFPPSVVSFTSLLRGYVR-HGLLADAIRLFQQMPERN-HV---SYTV----- 148
Query: 134 LCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLI 193
L LL+ G EA R+F+ + +++
Sbjct: 149 LLGGLLDAGR--------------------------------VNEARRLFDEMPDR-DVV 175
Query: 194 SKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGEN 253
+ AM++ C+ G + A F P+ N VSW +ISGY QNG+ KLF M E
Sbjct: 176 AWTAMLSGYCQAGRITEARALFDEMPKRN-VVSWTAMISGYAQNGEVNLARKLFEVMPER 234
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA 313
NE ++ + L +V+ A E L N + +P +
Sbjct: 235 ----NEVSWTAMLVGYIQAGHVEDAAE-----LFNAMPEHPVAAC--------------- 270
Query: 314 ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE 373
++M+VG+ +G ++ A+ F+ + E++ W+A+ Y + E
Sbjct: 271 ---------------NAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAY---EQNE 312
Query: 374 ALFDLLSEF--VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
L + LS F + GV + ++ +L CA A L G+E+HA +LR MD +S
Sbjct: 313 FLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVS 372
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
L+ MY KCGN+ A+ +F F +D+V++N MI YA HG E+A+ +F +M G+ P
Sbjct: 373 ALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSP 432
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
D +T++ L+A + G V+ G + FNSMT + I P +HY+CM+DL GR+ +E+A +
Sbjct: 433 DGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDL 492
Query: 552 MKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNW 611
+K++P E DAVI G+ + CR++RNAE+A A +KLL LE N YV L+++Y + G W
Sbjct: 493 IKNMPVEPDAVIWGALMGACRMHRNAEIAEVAAKKLLELEPGNAGPYVLLSHIYTSVGRW 552
Query: 612 AEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDV-SHPKTNAIYSVLAIFTGELYE 670
+ ++RK + N+ GCSW+ + +H+FT GDV +HP+ AI +L G L E
Sbjct: 553 EDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLME 612
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 203/713 (28%), Positives = 357/713 (50%), Gaps = 50/713 (7%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
++ ++ + H Q + G+ + N LI+ YSK + + ++F M R+V +W++
Sbjct: 68 KARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSS 127
Query: 62 IISACIKSHDLKQARSLF----DSSPHKDLVTYNSML--CG-------------YINAEG 102
+I+A ++ +A F D++ + +T+ S+L C + A G
Sbjct: 128 MIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMG 187
Query: 103 YEADAL--KLFIEMQSADEHI--------RMDEFTVTS-----TLNLCVKLLNVGFGRQL 147
E D I M S I +M E V S N + LN F +L
Sbjct: 188 METDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAF--EL 245
Query: 148 HAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE---EVNLISKNAMVAACCR 204
+ M++ + SL++ + R+ +E E ++I NA++ C+
Sbjct: 246 YEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCK 305
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG-----DAEEGLKLFVRMGENGVRWNE 259
++ A + F R + D +SW+ +I+GY Q+G +E +L RM GV N+
Sbjct: 306 CNSVQEAREIFDRMSK-RDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNK 364
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLL 319
TF S L AC ++ ++IH+ + K G + + + I ++Y KC ++ AE +
Sbjct: 365 VTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSK 424
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLL 379
+N + +S + Y G++ A + F + +NVV W + +GY + + +F+LL
Sbjct: 425 MANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELL 484
Query: 380 SEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
S + EG D + ++ +L AC A L GK +HA +++G++ D + ++L+ MYSK
Sbjct: 485 SS-MKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSK 543
Query: 440 CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
CG + A +F RD V +N M+A Y HG +A+ LF+ ML++ + P+ +T A+
Sbjct: 544 CGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAV 603
Query: 500 LSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE 559
+SA G V+ G + F M D+K++P HY CM+DL GRA +L++A EF++S+P E
Sbjct: 604 ISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEP 663
Query: 560 DAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRK 619
D + + L C+ + N +LA A +L LE + + Y+ L+N+YA G W + ++R+
Sbjct: 664 DISVWHALLGACKSHNNVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRR 723
Query: 620 QM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYE 670
M RG+K +R G S + ++ IH F D +HP+ +AI++ L T E+ E
Sbjct: 724 VMDDRGLKKDR--GESSIEIDGRIHTFVAEDCAHPEIDAIHAELETLTKEMKE 774
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 106/443 (23%), Positives = 194/443 (43%), Gaps = 76/443 (17%)
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
C K G+ +H + + + + +SLI+ YSK A +VF
Sbjct: 66 CAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVF----------- 114
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
R+ L D V+W+++I+ Y N + F RM +
Sbjct: 115 ----------------------RRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDAN 152
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
+ N TF S L AC ++ ++IH+ V G+ ++ V++ ++ +Y KC
Sbjct: 153 IEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKC------- 205
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEA 374
G + A F +TE+NVV WTA+ + +
Sbjct: 206 ------------------------GEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNE 241
Query: 375 LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLV 434
F+L + + + G+ +A+ V LL +C AL+ G+ IH++I G++ D + + L+
Sbjct: 242 AFELYEQML-QAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALI 300
Query: 435 DMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL-----LFEEMLEKGI 489
MY KC ++ A IF +RD++ ++ MIA YA G+++K + L E M +G+
Sbjct: 301 TMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGV 360
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH--YACMIDLYGRANQLEK 547
P+ VTF++IL A G++E G + ++ K+ E D + ++Y + + +
Sbjct: 361 FPNKVTFMSILRACTAHGALEQGRQIHAELS---KVGFELDRSLQTAIFNMYAKCGSIYE 417
Query: 548 AIEFMKSIPTEEDAVILGSFLNV 570
A + + ++ V SFL++
Sbjct: 418 AEQVFSKMAN-KNVVAWTSFLSM 439
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 149/316 (47%), Gaps = 37/316 (11%)
Query: 238 GDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVS 297
G E ++L + + G+ N +T+ + C R + K +H + + G+ + ++
Sbjct: 35 GRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLG 94
Query: 298 SGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVV 357
+ +++ Y K E++ AE + +R+ + SSMI Y+ + +A F+ +T+ N
Sbjct: 95 NSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDAN-- 152
Query: 358 VWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
+ + + + +L AC + L G++IH
Sbjct: 153 ------------------------------IEPNRITFLSILKACNNYSILEKGRKIHTI 182
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
+ MG++ D + + L+ MYSKCG ++ A +F ER++V + +I A H +A
Sbjct: 183 VKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEA 242
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA--CM 535
L+E+ML+ GI P+AVTFV++L++ ++ G + + ++ + ETD +
Sbjct: 243 FELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHIS---ERGLETDMIVANAL 299
Query: 536 IDLYGRANQLEKAIEF 551
I +Y + N +++A E
Sbjct: 300 ITMYCKCNSVQEAREI 315
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 110/225 (48%), Gaps = 7/225 (3%)
Query: 382 FVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
+ + G++ ++ ++ CA GK +H + +GV++D L ++L++ YSK
Sbjct: 46 IIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFE 105
Query: 442 NMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
++ AE +F+ RD+V ++ MIA YA + H KA FE M + I+P+ +TF++IL
Sbjct: 106 DVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILK 165
Query: 502 AFRHCGSVEMGEKYFNSMTADYKISPETD--HYACMIDLYGRANQLEKAIEFMKSIPTEE 559
A + +E G K + A + ETD +I +Y + ++ A E + TE
Sbjct: 166 ACNNYSILEKGRKIHTIVKA---MGMETDVAVATALITMYSKCGEISVACEVFHKM-TER 221
Query: 560 DAVILGSFLNVCRLNRNAELAGEAEEKLLRLE-GNNKARYVQLAN 603
+ V + + +R A E E++L+ N +V L N
Sbjct: 222 NVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLN 266
>gi|147833266|emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]
Length = 1009
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 223/756 (29%), Positives = 342/756 (45%), Gaps = 129/756 (17%)
Query: 11 ICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSH 70
+ H I+ + N LIH YS L SR +F M ER+V SW +ISA ++
Sbjct: 204 MVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEEG 263
Query: 71 DLKQARSLFD----SSPHKDLVTYNSMLCGYI-NAE------------------------ 101
+A+ +F DL++++++L G+ N E
Sbjct: 264 LXDEAKHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALETLEEMPERGLQPTVNSWN 323
Query: 102 ---------GYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMV 152
GY DAL +F M E + T+ S L C L + G+ +H
Sbjct: 324 GIISGCVQNGYLEDALDMFSRMLWYPEDPNI--ITIASILPACTGLKALRLGKAIHXIAX 381
Query: 153 KTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMAL 212
K + + S+IDMYSKC Y+ A +VF E N N M+AA EG++E AL
Sbjct: 382 KHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXK-AENKNTAMWNEMIAAYVNEGKVEDAL 440
Query: 213 -------KTFWRQPEL--------------------------------NDAVSWNTLISG 233
K W+ P++ + VS+N LISG
Sbjct: 441 GLLRSMQKDGWK-PDVITYNTILSGHARNGLKTQAXELLSEMVQMGLKPNVVSFNVLISG 499
Query: 234 YVQNGDAEEGLKLFVRMGENG------------VRWNEHTFASALSACCGLRNVKC-AKE 280
+ Q+G + E LK+F M +R N T AL AC L N+ C KE
Sbjct: 500 FQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGALPACADL-NLWCQGKE 558
Query: 281 IHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGN 340
IH + L+NG N FVSS +VD+Y KC +M
Sbjct: 559 IHGYTLRNGFEPNIFVSSALVDMYAKCHDM------------------------------ 588
Query: 341 MEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLG 400
+ A + F + +N V W AL +GY+ + E L E + EG+ ++ +IL
Sbjct: 589 -DSANKVFFRIDGRNTVSWNALMAGYINNKQPEEALKLFLEML-GEGLQPSSITFMILFP 646
Query: 401 ACALQAALHPGKEIHAYILRMGV-QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLV 459
AC AA+ G+ +H Y + + ++ + S L+DMY+KCG++ A+ +F + +E+D+
Sbjct: 647 ACGDIAAIRFGRGLHGYAAKCQLDELKNAIXSALIDMYAKCGSILDAKSVFDSEVEKDVP 706
Query: 460 LYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSM 519
L+N MI+ ++ HG A +F +M GI PD +TFV++LSA G VE G KYFNSM
Sbjct: 707 LWNAMISAFSVHGMARNAFAVFXQMELLGIXPDHITFVSLLSACARDGLVEEGWKYFNSM 766
Query: 520 TADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAEL 579
Y ++ +HY CM+ + G A L++A++F++ +P DA + + L CR++ N E+
Sbjct: 767 EISYGVAATLEHYTCMVGILGGAGLLDEALDFIRQMPYPPDACMWATLLQACRVHSNPEI 826
Query: 580 AGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEH 639
A + L LE +N Y+ L+N+Y + G W +R MRG K CS++ V
Sbjct: 827 GERAAKALFELEPDNATNYMLLSNIYVSSGMWDFAKNLRSFMRGRKLLTIKECSYLTVGS 886
Query: 640 EIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIAGAF 675
F G+ SHP+ I ++ E++G F
Sbjct: 887 HXCTFKGGESSHPELEEILETWDXLARKM-ELSGYF 921
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 156/585 (26%), Positives = 264/585 (45%), Gaps = 104/585 (17%)
Query: 22 TLTTITTNQL---IHIYSKHNLLRESRKLFDEMPERNVFSWNT------IISACIKSHDL 72
TLT + ++ I + ++ + L E R++ + + N W + ++ C L
Sbjct: 74 TLTNSSPTEISDSISLLNRCSTLSEFRQIHARVVKLNALKWKSSIGNKLVVLYCKNQWSL 133
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQ-SADEHIRMDEFTVTST 131
+ AR L D P++ + Y +++ Y +E ++ +LF + E + D++ V +
Sbjct: 134 EDARKLLDEIPNRTVPAYAALIRSYCRSEQWD----ELFSXFRLMVYEGMLPDKYLVPTI 189
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF-------- 183
L C +L G+ +H F+++ S ++ F ++LI YS C + VF
Sbjct: 190 LKACSAMLLXRIGKMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDV 249
Query: 184 ------------EGCTEEV--------------NLISKNAMVAACCREGEMEMALKTFWR 217
EG +E +LIS +A+++ R GE+++AL+T
Sbjct: 250 VSWTALISAYMEEGLXDEAKHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALETLEE 309
Query: 218 QPE--LNDAV-SWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRN 274
PE L V SWN +ISG VQNG E+ L +F RM N T AS L AC GL+
Sbjct: 310 MPERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKA 369
Query: 275 VKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVG 334
++ K IH K+G++ N +V ++D+Y KC + +YAE + +N+ + MI
Sbjct: 370 LRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAMWNEMIAA 429
Query: 335 YSLQGNMEEARRHFDSLT----EKNVVVWTALFSGYVKAQNCEALFDLLSEFVT---KEG 387
Y +G +E+A S+ + +V+ + + SG+ + +LLSE V K
Sbjct: 430 YVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAXELLSEMVQMGLKPN 489
Query: 388 VVT-------------------------------------------DALILVILLGACAL 404
VV+ + + + L ACA
Sbjct: 490 VVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGALPACAD 549
Query: 405 QAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVM 464
GKEIH Y LR G + + + S LVDMY+KC +M A +F R+ V +N +
Sbjct: 550 LNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNAL 609
Query: 465 IACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSV 509
+A Y ++ E+A+ LF EML +G++P ++TF+ + A CG +
Sbjct: 610 MAGYINNKQPEEALKLFLEMLGEGLQPSSITFMILFPA---CGDI 651
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 133/560 (23%), Positives = 224/560 (40%), Gaps = 136/560 (24%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
+++L L +A+ H A K G+ +I +YSK + K+F + +N WN
Sbjct: 367 LKALRLGKAI--HXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAMWN 424
Query: 61 TIISACIKSHDLKQA----RSLFDSSPHKDLVTYNSMLCGY------------------- 97
+I+A + ++ A RS+ D++TYN++L G+
Sbjct: 425 EMIAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAXELLSEMVQM 484
Query: 98 ---------------INAEGYEADALKLFIEMQSADE----------HIRMDEFTVTSTL 132
G +ALK+F MQS + +R + T+T L
Sbjct: 485 GLKPNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGAL 544
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C L G+++H + ++ + + F S+L+DMY+KC
Sbjct: 545 PACADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCH------------------ 586
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+M+ A K F+R N VSWN L++GY+ N EE LKLF+ M
Sbjct: 587 --------------DMDSANKVFFRIDGRN-TVSWNALMAGYINNKQPEEALKLFLEMLG 631
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL--ISNPFVSSGIVDVYCKCENM 310
G++ + TF AC + ++ + +H + K L + N + S ++D+Y KC
Sbjct: 632 EGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLDELKNA-IXSALIDMYAKC--- 687
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL---FSGYV 367
G++ +A+ FDS EK+V +W A+ FS +
Sbjct: 688 ----------------------------GSILDAKSVFDSEVEKDVPLWNAMISAFSVHG 719
Query: 368 KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG-KEIHAYILRMGVQMD 426
A+N A+F + G+ D + V LL ACA + G K ++ + GV
Sbjct: 720 MARNAFAVFXQMELL----GIXPDHITFVSLLSACARDGLVEEGWKYFNSMEISYGVAAT 775
Query: 427 KKLISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMI-ACYAHHGH---EEKAILLF 481
+ + +V + G + A + I Q D ++ ++ AC H E A LF
Sbjct: 776 LEHYTCMVGILGGAGLLDEALDFIRQMPYPPDACMWATLLQACRVHSNPEIGERAAKALF 835
Query: 482 EEMLEKGIKPDAVTFVAILS 501
E ++PD T +LS
Sbjct: 836 E------LEPDNATNYMLLS 849
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 102/462 (22%), Positives = 193/462 (41%), Gaps = 45/462 (9%)
Query: 152 VKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL-----ISKNAMVAACCREG 206
V T ++S +S I + ++C E ++ + L I +V C +
Sbjct: 72 VDTLTNSSPTEISDSISLLNRCSTLSEFRQIHARVVKLNALKWKSSIGNKLVVLYCKNQW 131
Query: 207 EMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASAL 266
+E A K P ++ LI Y ++ +E F M G+ +++ + L
Sbjct: 132 SLEDARKLLDEIPN-RTVPAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTIL 190
Query: 267 SACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSF 326
AC + + K +H +V++ + S+ FV + ++ Y C ++ + S+ R+
Sbjct: 191 KACSAMLLXRIGKMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVV 250
Query: 327 SISSMIVGYSLQGNMEEARRHFDSL----TEKNVVVWTALFSGYVKAQNCEALFDLLSEF 382
S +++I Y +G +EA+ F + + +++ W+AL SG+ + + + L E
Sbjct: 251 SWTALISAYMEEGLXDEAKHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALETLEEM 310
Query: 383 V------------------TKEGVVTDAL--------------ILVI--LLGACALQAAL 408
+ G + DAL I+ I +L AC AL
Sbjct: 311 PERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKAL 370
Query: 409 HPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACY 468
GK IH + G+ + + +++DMYSKCG+ YAE +F ++ ++N MIA Y
Sbjct: 371 RLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAMWNEMIAAY 430
Query: 469 AHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE 528
+ G E A+ L M + G KPD +T+ ILS G + + M + P
Sbjct: 431 VNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAXELLSEMV-QMGLKPN 489
Query: 529 TDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNV 570
+ +I + ++ +A++ + + + D LN+
Sbjct: 490 VVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNL 531
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 118/237 (49%), Gaps = 5/237 (2%)
Query: 338 QGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVI 397
Q ++E+AR+ D + + V + AL Y +++ + LF + EG++ D ++
Sbjct: 130 QWSLEDARKLLDEIPNRTVPAYAALIRSYCRSEQWDELFSXF-RLMVYEGMLPDKYLVPT 188
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD 457
+L AC+ GK +H +++R V+ D + + L+ YS CG++ + +F + ERD
Sbjct: 189 ILKACSAMLLXRIGKMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERD 248
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFN 517
+V + +I+ Y G ++A +F M G+KPD +++ A+LS F G +++ +
Sbjct: 249 VVSWTALISAYMEEGLXDEAKHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALETLE 308
Query: 518 SMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSI---PTEEDAVILGSFLNVC 571
M + + P + + +I + LE A++ + P + + + + S L C
Sbjct: 309 EM-PERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPAC 364
>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 727
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 195/640 (30%), Positives = 319/640 (49%), Gaps = 73/640 (11%)
Query: 17 IKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEM---PERNVFSWNTIISACIKSHDLK 73
++ G+T T ++ S + L+ R + + M + NV+ +I K ++
Sbjct: 125 LQHGVTPDNYTYPLVLKACSSLHALQLGRWVHETMHGKTKANVYVQCAVIDMFAKCGSVE 184
Query: 74 QARSLFDSSPHKDLVTYNSMLCGYI-NAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
AR +F+ P +DL ++ +++CG + N E EA L LF +M+S E + D V S L
Sbjct: 185 DARRMFEEMPDRDLASWTALICGTMWNGECLEA--LLLFRKMRS--EGLMPDSVIVASIL 240
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C +L V G L V++ ++ + +++IDMY KC EA RVF
Sbjct: 241 PACGRLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVF--------- 291
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+ MV +D VSW+TLI+GY QN +E KL++ M
Sbjct: 292 ---SHMV---------------------YSDVVSWSTLIAGYSQNCLYQESYKLYIGMIN 327
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G+ N S L A L +K KE+H++VLK GL+S+ V S ++ +Y C
Sbjct: 328 VGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSDVVVGSALIVMYANC----- 382
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G+++EA F+ ++K+++VW ++ GY +
Sbjct: 383 --------------------------GSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDF 416
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
E+ F E + + +V +L C AL GKEIH Y+ + G+ ++ + ++
Sbjct: 417 ESAFFTFRRIWGAEHR-PNFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNS 475
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
L+DMYSKCG + E +F+ + R++ YN MI+ HG EK + +E+M E+G +P+
Sbjct: 476 LIDMYSKCGFLELGEKVFKQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRPN 535
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
VTF+++LSA H G ++ G +NSM DY I P +HY+CM+DL GRA L+ A +F+
Sbjct: 536 KVTFISLLSACSHAGLLDRGWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAYKFI 595
Query: 553 KSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWA 612
+P DA + GS L CRL+ EL E++L+L+ ++ YV L+N+YA+ W
Sbjct: 596 TRMPMTPDANVFGSLLGACRLHNKVELTELLAERILQLKADDSGHYVLLSNLYASGKRWE 655
Query: 613 EMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
+M ++R ++ + G SW+ V H I++F HP
Sbjct: 656 DMSKVRSMIKDKGLEKKPGSSWIQVGHCIYVFHATSAFHP 695
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 147/614 (23%), Positives = 249/614 (40%), Gaps = 114/614 (18%)
Query: 5 NLKEALICHVQAIKAGLTLTTIT-----TNQLIHIYSKHNLLRESRKLFDEMPERNVFSW 59
NL EA H + G T +QL+++Y L+ + F +P + + +W
Sbjct: 42 NLHEARTLHALLLVLGFFQPTCPHSSSFASQLVNVYVNFGSLQHAFLTFRALPHKPIIAW 101
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N I+ + A F + H Y+SML
Sbjct: 102 NAILRGLV-------AVGHFTKAIH----FYHSML-----------------------QH 127
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
+ D +T L C L + GR +H M A+ + ++IDM++KC E+A
Sbjct: 128 GVTPDNYTYPLVLKACSSLHALQLGRWVHETM-HGKTKANVYVQCAVIDMFAKCGSVEDA 186
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
R+FE P+ D SW LI G + NG+
Sbjct: 187 RRMFE--------------------------------EMPD-RDLASWTALICGTMWNGE 213
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
E L LF +M G+ + AS L AC L VK + +++G S+ +VS+
Sbjct: 214 CLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQVCAVRSGFESDLYVSNA 273
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
++D+YCKC G+ EA R F + +VV W
Sbjct: 274 VIDMYCKC-------------------------------GDPLEAHRVFSHMVYSDVVSW 302
Query: 360 TALFSGYVKAQNC--EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
+ L +GY +QNC + + L + G+ T+A++ +L A L GKE+H +
Sbjct: 303 STLIAGY--SQNCLYQESYKLYIGMINV-GLATNAIVATSVLPALGKLELLKQGKEMHNF 359
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
+L+ G+ D + S L+ MY+ CG++ AE IF+ ++D++++N MI Y G E A
Sbjct: 360 VLKEGLMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESA 419
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID 537
F + +P+ +T V+IL G++ G++ +T + +ID
Sbjct: 420 FFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKS-GLGLNVSVGNSLID 478
Query: 538 LYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGN--NK 595
+Y + LE + K + + + ++ C + E G A + ++ EGN NK
Sbjct: 479 MYSKCGFLELGEKVFKQMMV-RNVTTYNTMISACGSHGQGE-KGLAFYEQMKEEGNRPNK 536
Query: 596 ARYVQLANVYAAEG 609
++ L + + G
Sbjct: 537 VTFISLLSACSHAG 550
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 169/436 (38%), Gaps = 103/436 (23%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
+K + V A+++G +N +I +Y K E+ ++F M +V SW+T+I+
Sbjct: 249 VKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIA- 307
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
GY Y+ ++ KL+I M + + +
Sbjct: 308 ------------------------------GYSQNCLYQ-ESYKLYIGMINVG--LATNA 334
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
TS L KL + G+++H F++K + S+LI MY+ C +EA +FE
Sbjct: 335 IVATSVLPALGKLELLKQGKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESIFE- 393
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
CT + +++ N+M+ GY GD E
Sbjct: 394 CTSDKDIMVWNSMIV--------------------------------GYNLVGDFESAFF 421
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
F R+ R N T S L C + ++ KEIH +V K+GL N V + ++D+Y
Sbjct: 422 TFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNSLIDMYS 481
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK----NVVVWTA 361
KC + E + VRN + ++MI G E+ ++ + E+ N V + +
Sbjct: 482 KCGFLELGEKVFKQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRPNKVTFIS 541
Query: 362 LFSGYVKA-----------------------QNCEALFDLLS---------EFVTKEGVV 389
L S A ++ + DL+ +F+T+ +
Sbjct: 542 LLSACSHAGLLDRGWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAYKFITRMPMT 601
Query: 390 TDALILVILLGACALQ 405
DA + LLGAC L
Sbjct: 602 PDANVFGSLLGACRLH 617
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 182/592 (30%), Positives = 306/592 (51%), Gaps = 66/592 (11%)
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
DL A +F+ P ++ VT+ M+ + GY +A+ LF+EM + D FT++
Sbjct: 220 DLVSAFKVFEKMPERNAVTWTLMITRLMQF-GYAGEAIDLFLEMILSG--YEPDRFTLSG 276
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
++ C + + G+QLH+ ++ LI+MY+KC
Sbjct: 277 VISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSV--------------- 321
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD-AEEGLKLFVR 249
+G M A K F Q ++ SW +I+GYVQ G EE L LF
Sbjct: 322 --------------DGSMCAARKIF-DQILDHNVFSWTAMITGYVQKGGYDEEALDLFRG 366
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
M V N TF+S L AC L ++ +++ + +K G S V++ ++ +Y +
Sbjct: 367 MILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYAR--- 423
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
G +++AR+ FD L EKN++ + + Y K
Sbjct: 424 ----------------------------SGRIDDARKAFDILFEKNLISYNTVIDAYAKN 455
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
N E +L +E + +G+ A LL A + G++IHA +++ G+++++ +
Sbjct: 456 LNSEEALELFNE-IEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSV 514
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+ L+ MYS+CGN+ A +F++ +R+++ + +I +A HG +A+ LF +MLE+G+
Sbjct: 515 CNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGV 574
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
+P+ VT++A+LSA H G V G K+F SM ++ + P +HYACM+D+ GR+ L +AI
Sbjct: 575 RPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAI 634
Query: 550 EFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEG 609
+F+ S+P + DA++ +FL CR++ N EL A + ++ E ++ A Y+ L+N+YA+
Sbjct: 635 QFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASTS 694
Query: 610 NWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
W E+ IRK M+ + AGCSWV VE+++H F VGD SHPK IY L
Sbjct: 695 KWDEVSNIRKAMKEKNLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDEL 746
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 133/560 (23%), Positives = 241/560 (43%), Gaps = 103/560 (18%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEM-PERNVFSW 59
+R+ + + H + ++ L L ++T N LI +YSK ++ +F M R++ SW
Sbjct: 77 IRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISW 136
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
+ ++S C ++++ + L+T+ M+ GY +
Sbjct: 137 SAMVS-CFANNNMG----------FRALLTFVDMI-----ENGYYPN------------- 167
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVS-SLIDMYSKCRCYEE 178
E+ + C V G + F+VKT S V LIDM+ K R
Sbjct: 168 -----EYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGR---- 218
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
G++ A K F + PE N AV+W +I+ +Q G
Sbjct: 219 ---------------------------GDLVSAFKVFEKMPERN-AVTWTLMITRLMQFG 250
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
A E + LF+ M +G + T + +SAC + + +++HS +++GL + V
Sbjct: 251 YAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGC 310
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
++++Y KC S+ G+M AR+ FD + + NV
Sbjct: 311 CLINMYAKC----------------------------SVDGSMCAARKIFDQILDHNVFS 342
Query: 359 WTALFSGYV-KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
WTA+ +GYV K E DL + V+ + L ACA AAL G+++ +
Sbjct: 343 WTAMITGYVQKGGYDEEALDLFRGMILTH-VIPNHFTFSSTLKACANLAALRIGEQVFTH 401
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
+++G + ++L+ MY++ G + A F E++L+ YN +I YA + + E+A
Sbjct: 402 AVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEA 461
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC--M 535
+ LF E+ ++G+ A TF ++LS G++ GE+ + K + + C +
Sbjct: 462 LELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVI---KSGLKLNQSVCNAL 518
Query: 536 IDLYGRANQLEKAIEFMKSI 555
I +Y R +E A + + +
Sbjct: 519 ISMYSRCGNIESAFQVFEDM 538
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/469 (24%), Positives = 206/469 (43%), Gaps = 105/469 (22%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNL---LRESRKLFDEMPERNVFSWNTIISACIKS 69
H QAI+ GLTL LI++Y+K ++ + +RK+FD++ + NVFSW
Sbjct: 294 HSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWT--------- 344
Query: 70 HDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVT 129
+M+ GY+ GY+ +AL LF M H+ + FT +
Sbjct: 345 ----------------------AMITGYVQKGGYDEEALDLFRGMILT--HVIPNHFTFS 380
Query: 130 STLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEE 189
STL C L + G Q+ VK + +SLI MY++ ++A + F+ E+
Sbjct: 381 STLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEK 440
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
NLI S+NT+I Y +N ++EE L+LF
Sbjct: 441 -NLI--------------------------------SYNTVIDAYAKNLNSEEALELFNE 467
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
+ + G+ + TFAS LS + + ++IH+ V+K+GL N V + ++ +Y +C
Sbjct: 468 IEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRC-- 525
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
GN+E A + F+ + ++NV+ WT++ +G+ K
Sbjct: 526 -----------------------------GNIESAFQVFEDMEDRNVISWTSIITGFAKH 556
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG-KEIHAYILRMGVQMDKK 428
+L + + +EGV + + + +L AC+ ++ G K + GV +
Sbjct: 557 GFATQALELFHKML-EEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRME 615
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFI--ERDLVLYNVMIACYAHHGHEE 475
+ +VD+ + G+++ A I F N + + D +++ + HG+ E
Sbjct: 616 HYACMVDILGRSGSLSEA-IQFINSMPYKADALVWRTFLGACRVHGNLE 663
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 125/269 (46%), Gaps = 69/269 (25%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
+ +L + E + H A+K G + N LI +Y++ + ++RK FD + E+N+ S+N
Sbjct: 389 LAALRIGEQVFTH--AVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYN 446
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
T+I A K+ +N+E +AL+LF E++ D+
Sbjct: 447 TVIDAYAKN----------------------------LNSE----EALELFNEIE--DQG 472
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
+ FT S L+ + +G G Q+HA ++K+ + ++LI MYS+C E A
Sbjct: 473 MGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAF 532
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+VFE E+ N+I SW ++I+G+ ++G A
Sbjct: 533 QVFED-MEDRNVI--------------------------------SWTSIITGFAKHGFA 559
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSAC 269
+ L+LF +M E GVR N T+ + LSAC
Sbjct: 560 TQALELFHKMLEEGVRPNLVTYIAVLSAC 588
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 121/263 (46%), Gaps = 18/263 (6%)
Query: 381 EFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC 440
E + +G D + L C + G +H + + +Q+D +++L+ +YSKC
Sbjct: 55 EHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKC 114
Query: 441 GNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
G A IFQ RDL+ ++ M++C+A++ +A+L F +M+E G P+ F A
Sbjct: 115 GQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAA 174
Query: 500 LSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY--GRANQLEKAIEFMKSIPT 557
A V +G+ F + + + +ID++ GR + L A + + +P
Sbjct: 175 TRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGD-LVSAFKVFEKMP- 232
Query: 558 EEDAVILGSFLNVCRLNRNAELAGEAEEKLLR--LEGNNKARYVQLANVYAAEGNWAEMG 615
E +AV L + RL + AGEA + L L G R+ L+ V +A N E+
Sbjct: 233 ERNAVTWT--LMITRLMQFG-YAGEAIDLFLEMILSGYEPDRFT-LSGVISACAN-MELL 287
Query: 616 RIRKQM------RGMKGNRFAGC 632
+ +Q+ G+ +R GC
Sbjct: 288 LLGQQLHSQAIRHGLTLDRCVGC 310
>gi|225445374|ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Vitis vinifera]
Length = 858
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 206/698 (29%), Positives = 332/698 (47%), Gaps = 113/698 (16%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K G ++ L+ +Y K +L ++RK+FD M E+NV +W
Sbjct: 205 HGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTW------------- 251
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
NSM+ GY+ G +A+ +F +M+ E I TV S L
Sbjct: 252 ------------------NSMIVGYVQ-NGLNQEAIDVFYDMRV--EGIEPTRVTVASFL 290
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ L + G+Q HA + S D SS+I+ YSK E+A VF E+
Sbjct: 291 SASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEK--- 347
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
D V+WN LIS YVQ+ + L + M
Sbjct: 348 ------------------------------DVVTWNLLISSYVQHHQVGKALNMCHLMRS 377
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN- 311
+R++ T +S LSA N+K KE H + ++ L S+ V++ I+D+Y KCE ++
Sbjct: 378 ENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDD 437
Query: 312 ----------------------YAESMLLLKGVR------------NSFSISSMIVGYSL 337
YA+ L + ++ N S +S+I+G+
Sbjct: 438 ARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLR 497
Query: 338 QGNMEEARRHFDSLT----EKNVVVWTALFSGYVKAQ-NCEALFDLLSEFVTKEGVVTDA 392
G + EA+ F + + N++ WT L SG ++ EA+ L + + + G+
Sbjct: 498 NGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAI--LFFQKMQEAGIRPSI 555
Query: 393 LILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQN 452
+ +L AC +L G+ IH +I R + + ++LVDMY+KCG++ A+ +F
Sbjct: 556 ASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHM 615
Query: 453 FIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMG 512
++L +YN MI+ YA HG +A+ LF+ + ++GI+PD++TF +ILSA H G V G
Sbjct: 616 MSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAGLVNEG 675
Query: 513 EKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCR 572
F M + + ++P +HY C++ L R L++A+ + ++P + DA ILGS L CR
Sbjct: 676 LNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMPFQPDAHILGSLLTACR 735
Query: 573 LNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQM--RGMKGNRFA 630
+ EL + L +LE +N YV L+N YAA G W E+ +R M RG++ N
Sbjct: 736 EHHEIELGEYLSKHLFKLEPSNSGNYVALSNAYAAAGRWVEVSNMRDLMKVRGLRKN--P 793
Query: 631 GCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
GCSW+ ++++F GD SHPKT IY++LA+ E+
Sbjct: 794 GCSWIQTGGKLNVFVAGDGSHPKTEEIYAMLAMLLSEM 831
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 127/500 (25%), Positives = 226/500 (45%), Gaps = 90/500 (18%)
Query: 76 RSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLC 135
RSL+ S H + S LC +G+ +++ L EM+ D I + + L C
Sbjct: 41 RSLYKSYFH-----HISSLC----KDGHLQESVHLLSEMEFEDFQIGPEIYG--ELLQGC 89
Query: 136 VKLLNVGFGRQLHAFMVKTSN--DASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLI 193
V + G+Q+HA ++K + + + + L+ Y+KC E A R+F
Sbjct: 90 VYERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLF---------- 139
Query: 194 SKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGEN 253
+ + + SW ++ + G +E+ L F+ M EN
Sbjct: 140 -----------------------HRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQEN 176
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA 313
GV + + L AC L+ + K +H +VLK G + FVSS +VD+Y KC
Sbjct: 177 GVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKC------ 230
Query: 314 ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE 373
G +E+AR+ FDS+ EKNVV W ++ GYV+ +
Sbjct: 231 -------------------------GVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQ 265
Query: 374 ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL 433
D+ + + EG+ + + L A A AL GK+ HA + + +D L S++
Sbjct: 266 EAIDVFYD-MRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSI 324
Query: 434 VDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDA 493
++ YSK G + AE++F +E+D+V +N++I+ Y H KA+ + M + ++ D+
Sbjct: 325 INFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDS 384
Query: 494 VTFVAILSAFRHCGSVEMGEK-----YFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
VT +ILSA ++++G++ ++ +D ++ +ID+Y + +++ A
Sbjct: 385 VTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVA------NSIIDMYAKCERIDDA 438
Query: 549 IEFMKSIPTEEDAVILGSFL 568
+ S TE D V+ + L
Sbjct: 439 RKVFDST-TERDLVLWNTLL 457
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 164/369 (44%), Gaps = 59/369 (15%)
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG- 289
IS ++G +E + L M + + L C R + ++IH+ +LKNG
Sbjct: 51 ISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGD 110
Query: 290 -LISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHF 348
N +V + +V Y KC+ A + VRN FS ++ IVG + E
Sbjct: 111 FFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAA-IVGLQCRMGFSE----- 164
Query: 349 DSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAAL 408
D+L G+++ Q + GV D +L +L AC +
Sbjct: 165 DALL------------GFIEMQ--------------ENGVFPDNFVLPNVLKACGSLQLI 198
Query: 409 HPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACY 468
GK +H Y+L+MG + S+LVDMY KCG + A +F + +E+++V +N MI Y
Sbjct: 199 GLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGY 258
Query: 469 AHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK-----YFNSMTADY 523
+G ++AI +F +M +GI+P VT + LSA + ++ G++ NS+ D
Sbjct: 259 VQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDN 318
Query: 524 KISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVI-------------LGSFLNV 570
+ + +I+ Y + +E A E + S E+D V +G LN+
Sbjct: 319 ILG------SSIINFYSKVGLIEDA-ELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNM 371
Query: 571 CRLNRNAEL 579
C L R+ L
Sbjct: 372 CHLMRSENL 380
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 132/288 (45%), Gaps = 46/288 (15%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
N+K H I+ L + N +I +Y+K + ++RK+FD ER++ WNT+++
Sbjct: 399 NIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLA 458
Query: 65 ACIKSHDLKQARSL-----FDSSPHKDLVTYNSMLCGYIN-------------------- 99
A + +A L FDS P +++++NS++ G++
Sbjct: 459 AYAQVGLSGEALKLFYQMQFDSVP-PNVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQ 517
Query: 100 --------------AEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR 145
G+ +A+ F +MQ A IR ++TS L C + ++ +GR
Sbjct: 518 PNLITWTTLISGLAQSGFGYEAILFFQKMQEAG--IRPSIASITSVLLACTDIPSLWYGR 575
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
+H F+ + S +SL+DMY+KC +EA +VF + + L NAM++A
Sbjct: 576 AIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSK-ELPIYNAMISAYALH 634
Query: 206 GEMEMALKTF---WRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
G+ AL F ++ D++++ +++S G EGL LF M
Sbjct: 635 GQAVEALALFKHLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFADM 682
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 180/589 (30%), Positives = 311/589 (52%), Gaps = 41/589 (6%)
Query: 75 ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNL 134
AR +FD+ P L +N+M+ GY + + + + +++ M +++ I+ D FT L
Sbjct: 60 ARQVFDAIPQPTLFIWNTMIKGY-SRINHPQNGVSMYLLMLASN--IKPDRFTFPFLLKG 116
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
+ + + +G+ L VK D++ F + I M+S CR + A +VF+
Sbjct: 117 FTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFD---------- 166
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
+ W + V+WN ++SGY + ++ LF+ M + G
Sbjct: 167 -----------------MGDAW------EVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRG 203
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
V N T LSAC L++++ K I+ ++ + N + + ++D++ C M+ A+
Sbjct: 204 VSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQ 263
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEA 374
S+ R+ S +S++ G++ G ++ AR++FD + E++ V WTA+ GY++
Sbjct: 264 SVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIE 323
Query: 375 LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLV 434
L E + V D +V +L ACA AL G+ + YI + ++ D + + L+
Sbjct: 324 ALALFRE-MQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALI 382
Query: 435 DMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAV 494
DMY KCGN+ A+ +F+ +D + MI A +GH E+A+ +F M+E I PD +
Sbjct: 383 DMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEI 442
Query: 495 TFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKS 554
T++ +L A H G VE G+ +F SMT + I P HY CM+DL GRA +LE+A E + +
Sbjct: 443 TYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVN 502
Query: 555 IPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEM 614
+P + ++++ GS L CR+++N +LA A +++L LE N A YV L N+YAA W +
Sbjct: 503 MPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLCNIYAACKRWENL 562
Query: 615 GRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
++RK M RG+K + GCS + + ++ F GD SHP++ IY+ L
Sbjct: 563 RQVRKLMMERGIK--KTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKL 609
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 177/409 (43%), Gaps = 71/409 (17%)
Query: 198 MVAACC--REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGV 255
++A CC G+M A + F P+ + WNT+I GY + + G+ +++ M + +
Sbjct: 45 VIAFCCAHESGKMIYARQVFDAIPQPTLFI-WNTMIKGYSRINHPQNGVSMYLLMLASNI 103
Query: 256 RWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAES 315
+ + TF L ++ K + + +K+G SN FV + ++ C ++
Sbjct: 104 KPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDL--- 160
Query: 316 MLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEAL 375
AR+ FD VV W + SGY + + +
Sbjct: 161 ----------------------------ARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKS 192
Query: 376 FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVD 435
L E + K GV +++ LV++L AC+ L GK I+ YI V+ + L + L+D
Sbjct: 193 KMLFIE-MEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLID 251
Query: 436 MYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEE-------------------- 475
M++ CG M A+ +F N RD++ + ++ +A+ G +
Sbjct: 252 MFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAM 311
Query: 476 -----------KAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYK 524
+A+ LF EM +KPD T V+IL+A H G++E+GE + +
Sbjct: 312 IDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGE-WVKTYIDKNS 370
Query: 525 ISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEED----AVILGSFLN 569
I +T +ID+Y + + KA + K + ++ A+I+G +N
Sbjct: 371 IKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAIN 419
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 156/355 (43%), Gaps = 41/355 (11%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
I N LI +++ + E++ +FD M R+V SW +I++ + AR FD P +
Sbjct: 244 ILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPER 303
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR 145
D V++ +M+ GY+ + +AL LF EMQ ++ ++ DEFT+ S L C L + G
Sbjct: 304 DYVSWTAMIDGYLRMNRF-IEALALFREMQMSN--VKPDEFTMVSILTACAHLGALELGE 360
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
+ ++ K S F ++LIDMY KC +A +VF+
Sbjct: 361 WVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFK--------------------- 399
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASA 265
EM K D +W +I G NG EE L +F M E + +E T+
Sbjct: 400 ---EMHHK---------DKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGV 447
Query: 266 LSACCGLRNVKCAKEIH-SWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR- 323
L AC V+ + S +++G+ N +VD+ + + A +++ V+
Sbjct: 448 LCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKP 507
Query: 324 NSFSISSMIVGYSLQGNM---EEARRHFDSLTEKNVVVWTALFSGYVKAQNCEAL 375
NS S++ + N+ E A + L +N V+ L + Y + E L
Sbjct: 508 NSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLCNIYAACKRWENL 562
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 128/305 (41%), Gaps = 46/305 (15%)
Query: 279 KEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQ 338
K+IHS +K GL S+P ++ C E+
Sbjct: 24 KQIHSHTIKMGLSSDPLFQKRVIAFCCAHES----------------------------- 54
Query: 339 GNMEEARRHFDSLTEKNVVVWTALFSGYVK---AQNCEALFDLLSEFVTKEGVVTDALIL 395
G M AR+ FD++ + + +W + GY + QN +++ L+ + D
Sbjct: 55 GKMIYARQVFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLM----LASNIKPDRFTF 110
Query: 396 VILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIE 455
LL AL GK + + ++ G + + + M+S C + A +F
Sbjct: 111 PFLLKGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDA 170
Query: 456 RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE-- 513
++V +N+M++ Y +K+ +LF EM ++G+ P++VT V +LSA +E G+
Sbjct: 171 WEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHI 230
Query: 514 -KYFNSMTADYKISPETDHYACMIDLY---GRANQLEKAIEFMKSIPTEEDAVILGSFLN 569
KY N + + E +ID++ G ++ + + MK+ I+ F N
Sbjct: 231 YKYINGGIVERNLILEN----VLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFAN 286
Query: 570 VCRLN 574
+ +++
Sbjct: 287 IGQID 291
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 198/652 (30%), Positives = 321/652 (49%), Gaps = 75/652 (11%)
Query: 13 HVQAIKAGLTLTTITTNQLIH--IYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSH 70
H Q IK GL T ++LI + S H FD +P
Sbjct: 7 HAQMIKTGLHNTNYALSKLIEFCVLSPH---------FDGLP------------------ 39
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
A S+F++ +L+ +N+M G+ + AL L++ M S + + +T
Sbjct: 40 ---YAISVFETIQEPNLLIWNTMFRGHALSSD-PVSALYLYVCMISLG--LLPNCYTFPF 93
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L C K G+Q+H ++K D + +SLI MY + E+A +VF+ +
Sbjct: 94 LLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHR- 152
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
+++S A++ +G + A K F P + D VSWN +ISGY + G+ +E L+LF M
Sbjct: 153 DVVSYTALITGYASKGYIASAQKMFDEIP-IKDVVSWNAMISGYAETGNNKEALELFKEM 211
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
+ VR +E T S +SAC +++ +++HSW+ +G SN + + ++D+Y KC
Sbjct: 212 MKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKC--- 268
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
G +E A F+ L+ K+V+ W L GY
Sbjct: 269 ----------------------------GEVETACGLFEGLSYKDVISWNTLIGGYTHMN 300
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM--GVQMDKK 428
+ L E + + G + + ++ +L ACA A+ G+ IH YI + GV
Sbjct: 301 LYKEALLLFQEML-RSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASS 359
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
++L+DMY+KCG++ A+ +F + + R L +N MI +A HG A +F M +
Sbjct: 360 HRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNE 419
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
I+PD +TFV +LSA H G +++G F SM DYKI+P+ +HY CMIDL G + ++A
Sbjct: 420 IEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEA 479
Query: 549 IEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAE 608
E + ++ E D VI S L C+++ N EL + L+++E N YV L+N+YA
Sbjct: 480 EEMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATA 539
Query: 609 GNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
G W E+ +IR + +GMK + GCS + ++ +H F +GD HP+ IY
Sbjct: 540 GRWNEVAKIRALLNDKGMK--KVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 589
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 162/600 (27%), Positives = 260/600 (43%), Gaps = 129/600 (21%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
+S +E H +K G L LI +Y ++ L ++RK+FD+ R+V S+
Sbjct: 100 KSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTA 159
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I+ + A+ +FD P KD+V++N+M+ GY G +AL+LF EM + +
Sbjct: 160 LITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAET-GNNKEALELFKEMMKTN--V 216
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFA-----VSSLIDMYSKCRCY 176
R DE T+ S ++ C + ++ GRQ+H+++ D GF V++LID+Y KC
Sbjct: 217 RPDESTMVSVVSACAQSASIELGRQVHSWI-----DDHGFGSNLKIVNALIDLYIKCGEV 271
Query: 177 EEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQ 236
E AC +FEG + D +SWNTLI GY
Sbjct: 272 ETACGLFEGLS---------------------------------YKDVISWNTLIGGYTH 298
Query: 237 NGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFV 296
+E L LF M +G N+ T S L AC L ++ + IH ++ K
Sbjct: 299 MNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKR-------- 350
Query: 297 SSGIVDVYCKCENMNYAESMLLLKGVRNSFS-ISSMIVGYSLQGNMEEARRHFDSLTEKN 355
LKGV N+ S +S+I Y+ G++E A++ FDS+ ++
Sbjct: 351 ----------------------LKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRS 388
Query: 356 VVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIH 415
+ W A+ G+ A FD+ S + K + D + V LL AC+ L G+
Sbjct: 389 LSSWNAMIFGFAMHGRANAAFDIFSR-MRKNEIEPDDITFVGLLSACSHSGMLDLGR--- 444
Query: 416 AYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEE 475
+I R ++ D K+ L Y MI H G +
Sbjct: 445 -HIFR-SMKEDYKITPKLEH-------------------------YGCMIDLLGHSGLFK 477
Query: 476 KAILLFEEMLEK-GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD-HYA 533
+A EEM+ ++PD V + ++L A + G+VE+GE Y ++ KI P+ Y
Sbjct: 478 EA----EEMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLI---KIEPKNPGSYV 530
Query: 534 CMIDLY---GRANQLEKAIEF-----MKSIP----TEEDAVILGSFLNVCRLNRNAELAG 581
+ ++Y GR N++ K MK +P E D+V+ + RN E+ G
Sbjct: 531 LLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYG 590
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 203/412 (49%), Gaps = 32/412 (7%)
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
R +HA M+KT + +A+S LI+ C F+G
Sbjct: 4 RMIHAQMIKTGLHNTNYALSKLIEF---CVLSPH----FDG------------------- 37
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFAS 264
+ A+ F E N + WNT+ G+ + D L L+V M G+ N +TF
Sbjct: 38 ---LPYAISVFETIQEPNLLI-WNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPF 93
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
L +C + + ++IH VLK G + +V + ++ +Y + + A + R+
Sbjct: 94 LLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRD 153
Query: 325 SFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVT 384
S +++I GY+ +G + A++ FD + K+VV W A+ SGY + N + +L E +
Sbjct: 154 VVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMM- 212
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
K V D +V ++ ACA A++ G+++H++I G + K+++ L+D+Y KCG +
Sbjct: 213 KTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVE 272
Query: 445 YAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR 504
A +F+ +D++ +N +I Y H ++A+LLF+EML G P+ VT ++IL A
Sbjct: 273 TACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACA 332
Query: 505 HCGSVEMGEKYFNSMTADYK-ISPETDHYACMIDLYGRANQLEKAIEFMKSI 555
H G++E+G + K ++ + H +ID+Y + +E A + SI
Sbjct: 333 HLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSI 384
>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
Length = 798
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 205/660 (31%), Positives = 330/660 (50%), Gaps = 91/660 (13%)
Query: 16 AIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA-CIKSHDLKQ 74
A +A TT + N L+ Y ++ L + LF MP R++ S+N +IS ++ L
Sbjct: 39 AFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISGLSLRRQTLPD 98
Query: 75 ARSLFDSSP-HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLN 133
A + S P +V++ S+L GY+ G ADA++LF +M + H+ +TV
Sbjct: 99 AAAALASIPFPPSVVSFTSLLRGYVR-HGLLADAIRLFQQMPERN-HV---SYTV----- 148
Query: 134 LCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLI 193
L LL+ G EA R+F+ + +++
Sbjct: 149 LLGGLLDAGR--------------------------------VNEARRLFDEMPDR-DVV 175
Query: 194 SKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGEN 253
+ AM++ C+ G + A F P+ N VSW +ISGY QNG+ KLF M E
Sbjct: 176 AWTAMLSGYCQAGRITEARALFDEMPKRN-VVSWTAMISGYAQNGEVNLARKLFEVMPER 234
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA 313
NE ++ + L +V+ A E L N + +P +
Sbjct: 235 ----NEVSWTAMLVGYIQAGHVEDAAE-----LFNAMPEHPVAAC--------------- 270
Query: 314 ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE 373
++M+VG+ +G ++ A+ F+ + E++ W+A+ Y + E
Sbjct: 271 ---------------NAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAY---EQNE 312
Query: 374 ALFDLLSEF--VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
L + LS F + GV + ++ +L CA A L G+E+HA +LR MD +S
Sbjct: 313 FLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVS 372
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
L+ MY KCGN+ A+ +F F +D+V++N MI YA HG E+A+ +F +M G+ P
Sbjct: 373 ALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSP 432
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
D +T++ L+A + G V+ G + FNSMT + I P +HY+CM+DL GR+ +E+A +
Sbjct: 433 DGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDL 492
Query: 552 MKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNW 611
+K++P E DAVI G+ + CR++RNAE+A A +KLL LE N YV L+++Y + G W
Sbjct: 493 IKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRW 552
Query: 612 AEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDV-SHPKTNAIYSVLAIFTGELYE 670
+ ++RK + N+ GCSW+ + +H+FT GDV +HP+ AI +L G L E
Sbjct: 553 EDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLME 612
>gi|115446683|ref|NP_001047121.1| Os02g0555100 [Oryza sativa Japonica Group]
gi|113536652|dbj|BAF09035.1| Os02g0555100 [Oryza sativa Japonica Group]
Length = 596
Score = 308 bits (789), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 187/566 (33%), Positives = 301/566 (53%), Gaps = 23/566 (4%)
Query: 127 TVTSTLNLCVKLLNVG----FGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
TV + L L + ++ G G +HA +VKT+ + L+ +Y+ +
Sbjct: 27 TVEAVLALLERAISAGDVRRLGAAVHALLVKTALTHHTLLSNRLVALYALLPTPAASLAA 86
Query: 183 FEGCTEEVNLISKNAMVAACCR-EGEMEMALKTFWRQPELN-DAVSWNTLISGYVQNGDA 240
F+ + N S N+++AA R G + AL+ P + + VS+NT+IS ++G
Sbjct: 87 FDDLPHK-NAHSYNSLLAALARGRGTLPDALRLLDGMPPASRNVVSYNTVISSLARHGRE 145
Query: 241 EEGLKLFVRM------GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
E L++F ++ G+ V + T SA SAC GLR+ + +E+H V+ +G+
Sbjct: 146 SEALRVFAQLARDRGLGQQQVAIDRFTVVSAASACAGLRDARHLRELHGAVVVSGMEVTV 205
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
+++ +VD Y K + A + +R+S S +SMI GY +++A + FD + +
Sbjct: 206 IMANAMVDAYSKAGRVEDARGVFDQMTIRDSVSWTSMIAGYCRASMLDDAVQVFDMMPAQ 265
Query: 355 NVVVWTALFSGYVKAQNCEALFDL-LSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
+ + WTAL SG+ QN E L L E +T EGVV LV LGACA + GKE
Sbjct: 266 DAIAWTALISGH--EQNGEEEIALELFERMTGEGVVPTPFALVSCLGACAKVGLVARGKE 323
Query: 414 IHAYILRMGVQMDKKLI---STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
+H +ILR + D + + L+DMYSKCG+M A +F +ERD++ +N M+ ++H
Sbjct: 324 VHGFILRRSIGSDPFNVFIHNALIDMYSKCGDMVAAMAVFDRMLERDIISWNSMVTGFSH 383
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD 530
+G ++++ +FE ML+ ++P VTF+A+L+A H G V G + SM D+ + P +
Sbjct: 384 NGQGKQSLAVFERMLKDEVQPTYVTFLAVLTACSHAGLVSDGRRILESMQ-DHGVEPRAE 442
Query: 531 HYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSF---LNVCRLNRNAELAGEAEEKL 587
HYA ID GR QLE+A EF+K + ++ GS+ L C ++ N E+A E E L
Sbjct: 443 HYAAFIDALGRNRQLEEASEFIKGLSSKIGLGTTGSWGALLGACHVHGNIEIAEEVAEAL 502
Query: 588 LRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVG 647
+LE N RYV L+N+Y+A G W + ++R M+G + SW+ V+ H+F
Sbjct: 503 FQLEPENSGRYVMLSNIYSAAGQWDDARQVRALMKGKGLRKDQAYSWIEVQRAKHMFVAD 562
Query: 648 DVSHPKTNAIYSVLAIFTGELYEIAG 673
D SH + N IY +L ++ I G
Sbjct: 563 DTSHHEANEIYEMLDKLFHHMFIIGG 588
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 186/355 (52%), Gaps = 13/355 (3%)
Query: 12 CHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHD 71
H +K LT T+ +N+L+ +Y+ S FD++P +N S+N++++A +
Sbjct: 51 VHALLVKTALTHHTLLSNRLVALYALLPTPAASLAAFDDLPHKNAHSYNSLLAALARGRG 110
Query: 72 -LKQARSLFDSSP--HKDLVTYNSMLCGYINAEGYEADALKLFIEMQS----ADEHIRMD 124
L A L D P +++V+YN+++ + G E++AL++F ++ + + +D
Sbjct: 111 TLPDALRLLDGMPPASRNVVSYNTVISS-LARHGRESEALRVFAQLARDRGLGQQQVAID 169
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
FTV S + C L + R+LH +V + + + ++++D YSK E+A VF+
Sbjct: 170 RFTVVSAASACAGLRDARHLRELHGAVVVSGMEVTVIMANAMVDAYSKAGRVEDARGVFD 229
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
T + +S +M+A CR ++ A++ F P DA++W LISG+ QNG+ E L
Sbjct: 230 QMTIR-DSVSWTSMIAGYCRASMLDDAVQVFDMMPA-QDAIAWTALISGHEQNGEEEIAL 287
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP---FVSSGIV 301
+LF RM GV S L AC + V KE+H ++L+ + S+P F+ + ++
Sbjct: 288 ELFERMTGEGVVPTPFALVSCLGACAKVGLVARGKEVHGFILRRSIGSDPFNVFIHNALI 347
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNV 356
D+Y KC +M A ++ R+ S +SM+ G+S G +++ F+ + + V
Sbjct: 348 DMYSKCGDMVAAMAVFDRMLERDIISWNSMVTGFSHNGQGKQSLAVFERMLKDEV 402
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 149/321 (46%), Gaps = 41/321 (12%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + +G+ +T I N ++ YSK + ++R +FD+M R+ SW ++I+ ++ L
Sbjct: 193 HGAVVVSGMEVTVIMANAMVDAYSKAGRVEDARGVFDQMTIRDSVSWTSMIAGYCRASML 252
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
A +FD P +D + + +++ G+ G E AL+LF M E + F + S L
Sbjct: 253 DDAVQVFDMMPAQDAIAWTALISGH-EQNGEEEIALELFERMTG--EGVVPTPFALVSCL 309
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAV---SSLIDMYSKCRCYEEACRVFEGCTEE 189
C K+ V G+++H F+++ S + F V ++LIDMYSKC
Sbjct: 310 GACAKVGLVARGKEVHGFILRRSIGSDPFNVFIHNALIDMYSKC---------------- 353
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
G+M A+ F R E D +SWN++++G+ NG ++ L +F R
Sbjct: 354 ----------------GDMVAAMAVFDRMLE-RDIISWNSMVTGFSHNGQGKQSLAVFER 396
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
M ++ V+ TF + L+AC V + I + +G+ + +D + N
Sbjct: 397 MLKDEVQPTYVTFLAVLTACSHAGLVSDGRRILESMQDHGVEPRAEHYAAFIDALGR--N 454
Query: 310 MNYAESMLLLKGVRNSFSISS 330
E+ +KG+ + + +
Sbjct: 455 RQLEEASEFIKGLSSKIGLGT 475
>gi|297727555|ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group]
gi|13940614|gb|AAK50416.1|AC021891_17 Putative selenium-binding protein-like [Oryza sativa Japonica
Group]
gi|31431939|gb|AAP53645.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125574711|gb|EAZ15995.1| hypothetical protein OsJ_31439 [Oryza sativa Japonica Group]
gi|255679385|dbj|BAH94869.1| Os10g0400250 [Oryza sativa Japonica Group]
Length = 651
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 184/553 (33%), Positives = 290/553 (52%), Gaps = 36/553 (6%)
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
R D T L C +L G+G A +++ D+ F V
Sbjct: 122 RPDHLTFPFLLKACARLREWGYGDAALAHVLRLGLDSDVFVV------------------ 163
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
NA G ME A + F R P + D VSWNTLI GYV+ G+
Sbjct: 164 --------------NAATHFLSIRGPMEDARRLFDRSP-VRDLVSWNTLIGGYVRRGNPA 208
Query: 242 EGLKLFVRM-GENGV-RWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
E L+LF RM E+ V R +E T +A+S C +R+++ + +H +V +G+ + +
Sbjct: 209 EALELFWRMVAEDAVVRPDEVTMIAAVSGCGQMRDLELGRRLHGFVDSDGVSCTVRLMNA 268
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
++D+Y KC ++ A+S+ R S ++MIVG++ G M++AR+ FD + E++V W
Sbjct: 269 LMDMYIKCGSLEMAKSVFERIEHRTVVSWTTMIVGFAKFGLMDDARKVFDEMPERDVFPW 328
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
AL +GYV+ + C+ L E + + VV D + +V LL AC+ AL G +H YI
Sbjct: 329 NALMTGYVQCKQCKEALSLFHE-MQEASVVPDEITMVNLLTACSQLGALEMGMWVHRYIE 387
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
+ + L ++L+DMY+KCGN+ A IF+ E++ + + MI A+HGH +AI
Sbjct: 388 KHRLVFSVALGTSLIDMYAKCGNIEKAIHIFKEIPEKNALTWTAMICGLANHGHANEAIE 447
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
F M+E G KPD +TF+ +LSA H G V+ G ++F+ M Y + + HY+CMIDL
Sbjct: 448 HFRTMIELGQKPDEITFIGVLSACCHAGLVKEGREFFSLMETKYHLERKMKHYSCMIDLL 507
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYV 599
GRA L++A + + ++P E DAV+ G+ CR+ N L +A KL+ ++ ++ YV
Sbjct: 508 GRAGHLDEAEQLVNTMPMEPDAVVWGAIFFACRMQGNISLGEKAAMKLVEIDPSDSGIYV 567
Query: 600 QLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYS 659
LAN+YA + ++R MR + + GCS + + +H F V D SH ++AIY
Sbjct: 568 LLANMYAEANMRKKADKVRAMMRHLGVEKVPGCSCIELNGVVHEFIVKDKSHMDSHAIYD 627
Query: 660 VLAIFTGELYEIA 672
L T ++ A
Sbjct: 628 CLHEITLQIKHTA 640
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 132/478 (27%), Positives = 221/478 (46%), Gaps = 72/478 (15%)
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
++ AR LFD SP +DLV++N+++ GY+ G A+AL+LF M + D +R DE T+ +
Sbjct: 176 MEDARRLFDRSPVRDLVSWNTLIGGYVR-RGNPAEALELFWRMVAEDAVVRPDEVTMIAA 234
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
++ C ++ ++ GR+LH F+ + +++L+DMY KC E A VFE E
Sbjct: 235 VSGCGQMRDLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFER-IEHRT 293
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
++S M+ + G M+ A K F PE D WN L++GYVQ +E L LF M
Sbjct: 294 VVSWTTMIVGFAKFGLMDDARKVFDEMPE-RDVFPWNALMTGYVQCKQCKEALSLFHEMQ 352
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
E V +E T + L+AC L ++ +H ++ K+ L+ + + + ++D+Y KC
Sbjct: 353 EASVVPDEITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGTSLIDMYAKC---- 408
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
GN+E+A F + EKN + WTA+ G +
Sbjct: 409 ---------------------------GNIEKAIHIFKEIPEKNALTWTAMICGLANHGH 441
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
+ + + G D + + +L AC HA +++ G ++ S
Sbjct: 442 ANEAIEHFRTMI-ELGQKPDEITFIGVLSACC-----------HAGLVKEG----REFFS 485
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
+ Y +ER + Y+ MI GH ++A L M ++P
Sbjct: 486 LMETKYH---------------LERKMKHYSCMIDLLGRAGHLDEAEQLVNTM---PMEP 527
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISP-ETDHYACMIDLYGRANQLEKA 548
DAV + AI A R G++ +GEK + +I P ++ Y + ++Y AN +KA
Sbjct: 528 DAVVWGAIFFACRMQGNISLGEKAAMKLV---EIDPSDSGIYVLLANMYAEANMRKKA 582
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 157/364 (43%), Gaps = 69/364 (18%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
MR L L L H G++ T N L+ +Y K L ++ +F+ + R V SW
Sbjct: 241 MRDLELGRRL--HGFVDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFERIEHRTVVSWT 298
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
T+I K + AR +FD P +D+ +N+++ GY+ + + +AL LF EMQ A
Sbjct: 299 TMIVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCK-EALSLFHEMQEAS-- 355
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
+ DE T+ + L C +L + G +H ++ K S +SLIDMY+KC
Sbjct: 356 VVPDEITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGTSLIDMYAKC------- 408
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
G +E A+ F PE N A++W +I G +G A
Sbjct: 409 -------------------------GNIEKAIHIFKEIPEKN-ALTWTAMICGLANHGHA 442
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
E ++ F M E G + +E TF LSACC H+ ++K G
Sbjct: 443 NEAIEHFRTMIELGQKPDEITFIGVLSACC-----------HAGLVKEGR---------- 481
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT-EKNVVVW 359
+ + E + E R S MI G+++EA + +++ E + VVW
Sbjct: 482 -EFFSLMETKYHLE--------RKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMEPDAVVW 532
Query: 360 TALF 363
A+F
Sbjct: 533 GAIF 536
>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
Length = 706
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 205/660 (31%), Positives = 330/660 (50%), Gaps = 91/660 (13%)
Query: 16 AIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA-CIKSHDLKQ 74
A +A TT + N L+ Y ++ L + LF MP R++ S+N +IS ++ L
Sbjct: 39 AFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISGLSLRRQTLPD 98
Query: 75 ARSLFDSSP-HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLN 133
A + S P +V++ S+L GY+ G ADA++LF +M + H+ +TV
Sbjct: 99 AAAALASIPFPPSVVSFTSLLRGYVR-HGLLADAIRLFQQMPERN-HV---SYTV----- 148
Query: 134 LCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLI 193
L LL+ G EA R+F+ + +++
Sbjct: 149 LLGGLLDAGR--------------------------------VNEARRLFDEMPDR-DVV 175
Query: 194 SKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGEN 253
+ AM++ C+ G + A F P+ N VSW +ISGY QNG+ KLF M E
Sbjct: 176 AWTAMLSGYCQAGRITEARALFDEMPKRN-VVSWTAMISGYAQNGEVNLARKLFEVMPER 234
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA 313
NE ++ + L +V+ A E L N + +P +
Sbjct: 235 ----NEVSWTAMLVGYIQAGHVEDAAE-----LFNAMPEHPVAAC--------------- 270
Query: 314 ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE 373
++M+VG+ +G ++ A+ F+ + E++ W+A+ Y + E
Sbjct: 271 ---------------NAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAY---EQNE 312
Query: 374 ALFDLLSEF--VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
L + LS F + GV + ++ +L CA A L G+E+HA +LR MD +S
Sbjct: 313 FLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVS 372
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
L+ MY KCGN+ A+ +F F +D+V++N MI YA HG E+A+ +F +M G+ P
Sbjct: 373 ALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSP 432
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
D +T++ L+A + G V+ G + FNSMT + I P +HY+CM+DL GR+ +E+A +
Sbjct: 433 DGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDL 492
Query: 552 MKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNW 611
+K++P E DAVI G+ + CR++RNAE+A A +KLL LE N YV L+++Y + G W
Sbjct: 493 IKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRW 552
Query: 612 AEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDV-SHPKTNAIYSVLAIFTGELYE 670
+ ++RK + N+ GCSW+ + +H+FT GDV +HP+ AI +L G L E
Sbjct: 553 EDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLME 612
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 201/678 (29%), Positives = 334/678 (49%), Gaps = 103/678 (15%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
+++ +K H + R +F++ P +++VT+ S+L GYI +G +D ++LF M++ E
Sbjct: 143 TSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQ-DGALSDVMELFFRMRA--E 199
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
+ + T S L++ V GR++HA VK ++ F +SL++MY+KC EEA
Sbjct: 200 GVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEA 259
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
VF G E D VSWNTL++G V NG
Sbjct: 260 RVVFCGM---------------------------------ETRDMVSWNTLMAGLVLNGH 286
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
E L+LF + + T+A+ + C ++ + A+++HS VLK G S V +
Sbjct: 287 DLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTA 346
Query: 300 IVDVYCKCENM-NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNV-- 356
++D Y K + N + LL+ G +N S ++MI G G++ A F + E V
Sbjct: 347 LMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAP 406
Query: 357 ---------------------------------VVWTALFSGYVKAQNCE---ALFDLLS 380
+V TAL + Y K N E ++F ++
Sbjct: 407 NDFTYSTILTASVASLPPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMID 466
Query: 381 E-------------------------FV--TKEGVVTDALILVILLGACA-LQAALHPGK 412
+ F+ T G+ + + ++ ACA A + G+
Sbjct: 467 QKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGR 526
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
+ HA ++ + S LV MY++ G++ A+ IF+ +RDLV +N M++ YA HG
Sbjct: 527 QFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHG 586
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
+ +KA+ +F +M +GI+ D VTF++++ H G VE G++YF+SM DY I+P +HY
Sbjct: 587 YSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHY 646
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
ACM+DLY RA +L++A+ ++ + ++ + L C++++N EL A EKLL LE
Sbjct: 647 ACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKVHKNVELGKLAAEKLLSLEP 706
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
+ A YV L+N+Y+A G W E +RK M K + AGCSW+ +++++H F D SHP
Sbjct: 707 FDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVKKEAGCSWIQIKNKVHSFIASDKSHP 766
Query: 653 KTNAIYSVLAIFTGELYE 670
+ IY+ L T +L +
Sbjct: 767 LSEQIYAKLRAMTTKLKQ 784
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 182/435 (41%), Gaps = 73/435 (16%)
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
D AR FD PH++ T + L + G AL F+++ R+ +
Sbjct: 53 DATGARQAFDEIPHRN--TLDHALFDHAR-RGSVHQALDHFLDVHRCHGG-RVGGGALVG 108
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV-SSLIDMYSKCRCYEEACRVFEGCTEE 189
L +C + + G+QLH ++ +D V +SL+DMY K + +VFE
Sbjct: 109 VLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEA---- 164
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
P+ N V+W +L++GY+Q+G + ++LF R
Sbjct: 165 ----------------------------MPKRN-VVTWTSLLTGYIQDGALSDVMELFFR 195
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
M GV N TFAS LS V + +H+ +K G S FV + ++++Y KC
Sbjct: 196 MRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKC-- 253
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV-K 368
G +EEAR F + +++V W L +G V
Sbjct: 254 -----------------------------GLVEEARVVFCGMETRDMVSWNTLMAGLVLN 284
Query: 369 AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK 428
+ EAL L + + ++T + + + CA L +++H+ +L+ G
Sbjct: 285 GHDLEAL-QLFHDSRSSITMLTQSTYATV-IKLCANIKQLGLARQLHSSVLKRGFHSYGN 342
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFI-ERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
+++ L+D YSK G + A IF +++V + MI +G A LF M E
Sbjct: 343 VMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMRED 402
Query: 488 GIKPDAVTFVAILSA 502
G+ P+ T+ IL+A
Sbjct: 403 GVAPNDFTYSTILTA 417
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 197/658 (29%), Positives = 319/658 (48%), Gaps = 103/658 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
HV+ ++AGL N LI +Y+K +R++R++FD M R+ SW T+ A +S
Sbjct: 168 HVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAES--- 224
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
GY ++LK + M E +R T + L
Sbjct: 225 -----------------------------GYAQESLKTYHAM--LQEGVRPSRITYMNVL 253
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C L + G+Q+HA +V++ + + ++L MY KC ++A VFE C ++
Sbjct: 254 SACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFE-CLPNRDV 312
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
I+ N M I G V +G EE +F RM +
Sbjct: 313 IAWNTM--------------------------------IGGLVDSGQLEEAHGMFHRMLK 340
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
V + T+ + LSAC + C KEIH+ +K+GL+S+ + ++++Y K
Sbjct: 341 ECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKA----- 395
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G+M++AR+ FD + +++VV WTAL GY +C
Sbjct: 396 --------------------------GSMKDARQVFDRMPKRDVVSWTALVGGYA---DC 426
Query: 373 EALFDLLSEF--VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
+ + S F + ++GV + + + +L AC+ AL GKEIHA +++ G+ D +
Sbjct: 427 GQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVA 486
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+ L+ MY KCG++ A + + RD+V +N +I A +G +A+ FE M + ++
Sbjct: 487 NALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMR 546
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
P+A TFV ++SA R VE G + F SM DY I P HYACM+D+ RA L +A +
Sbjct: 547 PNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAED 606
Query: 551 FMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGN 610
+ ++P + A + G+ L CR + N E+ +A E+ L+LE N YV L+ +YAA G
Sbjct: 607 VILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGM 666
Query: 611 WAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
W ++ ++RK M+ + G SW+ V E+H F GD SHP+T IYS L T ++
Sbjct: 667 WRDVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIYSELEALTKQI 724
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 131/505 (25%), Positives = 237/505 (46%), Gaps = 69/505 (13%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
NV+ NT++ + + +AR LFD +K +V++N M+ GY + G +A LF M
Sbjct: 78 NVYIINTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAH-RGLGQEAFNLFTLM 136
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
Q E + D+FT S L+ C + +GR++H +++ + ++LI MY+KC
Sbjct: 137 Q--QEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCG 194
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
+A RVF +AM + D VSW TL Y
Sbjct: 195 SVRDARRVF------------DAMAS---------------------RDEVSWTTLTGAY 221
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
++G A+E LK + M + GVR + T+ + LSAC L ++ K+IH+ ++++ S+
Sbjct: 222 AESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDV 281
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
VS+ + +Y KC G +++AR F+ L +
Sbjct: 282 RVSTALTKMYIKC-------------------------------GAVKDAREVFECLPNR 310
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
+V+ W + G V + E + + KE V D + + +L ACA L GKEI
Sbjct: 311 DVIAWNTMIGGLVDSGQLEEAHGMFHRML-KECVAPDRVTYLAILSACARPGGLACGKEI 369
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
HA ++ G+ D + + L++MYSK G+M A +F +RD+V + ++ YA G
Sbjct: 370 HARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQV 429
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC 534
++ F++ML++G++ + +T++ +L A + +++ G K ++ I +
Sbjct: 430 VESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWG-KEIHAEVVKAGIFADLAVANA 488
Query: 535 MIDLYGRANQLEKAIEFMKSIPTEE 559
++ +Y + +E AI + + T +
Sbjct: 489 LMSMYFKCGSVEDAIRVSEGMSTRD 513
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 117/472 (24%), Positives = 206/472 (43%), Gaps = 71/472 (15%)
Query: 88 VTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQL 147
V +SM+ + AD L+ + S ++D + L CVK ++ G+Q+
Sbjct: 12 VDKSSMIPTSTDGWYAPADVLQYLHQKGS-----QVDSYDYVKLLQSCVKAKDLAVGKQV 66
Query: 148 HAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGE 207
H +++ + + +++L+ +Y C EA R+F+ + +
Sbjct: 67 HEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSNK------------------ 108
Query: 208 MEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALS 267
VSWN +ISGY G +E LF M + G+ ++ TF S LS
Sbjct: 109 ---------------SVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILS 153
Query: 268 ACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFS 327
AC + +E+H V++ GL +N V + ++ +Y KC
Sbjct: 154 ACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKC-------------------- 193
Query: 328 ISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEG 387
G++ +ARR FD++ ++ V WT L Y ++ + + +EG
Sbjct: 194 -----------GSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAML-QEG 241
Query: 388 VVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAE 447
V + + +L AC AAL GK+IHA I+ D ++ + L MY KCG + A
Sbjct: 242 VRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAR 301
Query: 448 IIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCG 507
+F+ RD++ +N MI G E+A +F ML++ + PD VT++AILSA G
Sbjct: 302 EVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPG 361
Query: 508 SVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE 559
+ G++ D +S + +I++Y +A ++ A + +P +
Sbjct: 362 GLACGKEIHARAVKDGLVS-DVRFGNALINMYSKAGSMKDARQVFDRMPKRD 412
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 182/621 (29%), Positives = 310/621 (49%), Gaps = 69/621 (11%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
E++VF+ N ++ +K + A +F+ P D+V++N+++ G + G++ A++L +
Sbjct: 234 EKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCV-LNGHDHRAIELLL 292
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
+M+S+ + + F ++S L C GRQ+H FM+K + D+ + L+DMY+K
Sbjct: 293 QMKSSG--LVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAK 350
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
++A +VF+ + D + WN LIS
Sbjct: 351 NHFLDDAMKVFDWMSHR---------------------------------DLILWNALIS 377
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
G G +E +F + + G+ N T A+ L + L +++H+ K G I
Sbjct: 378 GCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIF 437
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
+ V +G++D Y KC ++ +A R F+ +
Sbjct: 438 DAHVVNGLIDSYWKCSCLS-------------------------------DAIRVFEECS 466
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
+++ T++ + + + E L E + K G+ D +L LL ACA +A GK
Sbjct: 467 SGDIIAVTSMITALSQCDHGEGAIKLFMEMLRK-GLEPDPFVLSSLLNACASLSAYEQGK 525
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
++HA++++ D + LV Y+KCG++ AE+ F + ER +V ++ MI A HG
Sbjct: 526 QVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHG 585
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
H ++A+ LF M+++GI P+ +T ++L A H G V+ ++YFNSM + I +HY
Sbjct: 586 HGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHY 645
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
+CMIDL GRA +L+ A+E + S+P + +A + G+ L R++++ EL A EKL LE
Sbjct: 646 SCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEP 705
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
+V LAN YA+ G W E+ ++RK M+ + SWV V+ ++H F VGD SHP
Sbjct: 706 EKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHP 765
Query: 653 KTNAIYSVLAIFTGELYEIAG 673
T IYS L G+L AG
Sbjct: 766 MTKEIYSKLDEL-GDLMSKAG 785
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 198/428 (46%), Gaps = 70/428 (16%)
Query: 75 ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNL 134
AR +FD P V+++S++ Y N G A++ F M++ E + +EF + L
Sbjct: 56 ARRVFDEIPDPCHVSWSSLVTAYSN-NGLPRSAIQAFHGMRA--EGVCCNEFALPVVLK- 111
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
CV + G Q+HA + T + F ++L+ MY ++A RVF+ E N
Sbjct: 112 CVP--DAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERN--- 166
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
AVSWN L+S YV+N + +++F M +G
Sbjct: 167 -----------------------------AVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG 197
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
++ E F+ ++AC G RN+ +++H+ V++ G + F ++ +VD+Y K ++
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVD--- 254
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEA 374
I+S+I F+ + + +VV W AL SG V +
Sbjct: 255 -------------IASVI---------------FEKMPDSDVVSWNALISGCVLNGHDHR 286
Query: 375 LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLV 434
+LL + + G+V + +L +L ACA A G++IH ++++ D + LV
Sbjct: 287 AIELLLQ-MKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLV 345
Query: 435 DMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAV 494
DMY+K + A +F RDL+L+N +I+ +H G ++A +F + ++G+ +
Sbjct: 346 DMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRT 405
Query: 495 TFVAILSA 502
T A+L +
Sbjct: 406 TLAAVLKS 413
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 5/107 (4%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H IK N L++ Y+K + ++ F +PER V SW+ +I +
Sbjct: 528 HAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHG 587
Query: 73 KQARSLF----DSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQ 115
K+A LF D + + +T S+LC N G +A + F M+
Sbjct: 588 KRALELFGRMVDEGINPNHITMTSVLCA-CNHAGLVDEAKRYFNSMK 633
Score = 39.7 bits (91), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 403 ALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYN 462
A AL PG +HA +L+ G L + L+ YSKC A +F + V ++
Sbjct: 15 AAAQALLPGAHLHANLLKSGFL--ASLRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWS 72
Query: 463 VMIACYAHHGHEEKAILLFEEMLEKGI 489
++ Y+++G AI F M +G+
Sbjct: 73 SLVTAYSNNGLPRSAIQAFHGMRAEGV 99
>gi|297738890|emb|CBI28135.3| unnamed protein product [Vitis vinifera]
Length = 1974
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 202/655 (30%), Positives = 326/655 (49%), Gaps = 82/655 (12%)
Query: 56 VFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQ 115
VF ++++ K L+ AR +FDS K++VT+NSM+ GY+ G +A+ +F +M+
Sbjct: 1312 VFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQ-NGLNQEAIDVFYDMR 1370
Query: 116 SADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRC 175
E I TV S L+ L + G+Q HA + S D SS+I+ YSK
Sbjct: 1371 V--EGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGL 1428
Query: 176 YEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYV 235
E+A VF E+ D V+WN LIS YV
Sbjct: 1429 IEDAELVFSRMLEK---------------------------------DVVTWNLLISSYV 1455
Query: 236 QNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF 295
Q+ + L + M +R++ T +S LSA N+K KE H + ++ L S+
Sbjct: 1456 QHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVV 1515
Query: 296 VSSGIVDVYCKCENMN-----------------------YAESMLLLKGVR--------- 323
V++ I+D+Y KCE ++ YA+ L + ++
Sbjct: 1516 VANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDS 1575
Query: 324 ---NSFSISSMIVGYSLQGNMEEARRHFDSLT----EKNVVVWTALFSGYVKAQ-NCEAL 375
N S +S+I+G+ G + EA+ F + + N++ WT L SG ++ EA+
Sbjct: 1576 VPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAI 1635
Query: 376 FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVD 435
L + + + G+ + +L AC +L G+ IH +I R + + ++LVD
Sbjct: 1636 --LFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVD 1693
Query: 436 MYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVT 495
MY+KCG++ A+ +F ++L +YN MI+ YA HG +A+ LF+ + ++GI+PD++T
Sbjct: 1694 MYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSIT 1753
Query: 496 FVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSI 555
F +ILSA H G V G F M + + ++P +HY C++ L R L++A+ + ++
Sbjct: 1754 FTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTM 1813
Query: 556 PTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMG 615
P + DA ILGS L CR + EL + L +LE +N YV L+N YAA G W E+
Sbjct: 1814 PFQPDAHILGSLLTACREHHEIELGEYLSKHLFKLEPSNSGNYVALSNAYAAAGRWVEVS 1873
Query: 616 RIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
+R M RG++ N GCSW+ ++++F GD SHPKT IY++LA+ E+
Sbjct: 1874 NMRDLMKVRGLRKN--PGCSWIQTGGKLNVFVAGDGSHPKTEEIYAMLAMLLSEM 1926
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 131/500 (26%), Positives = 226/500 (45%), Gaps = 90/500 (18%)
Query: 76 RSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLC 135
RSL+ S H + S LC +G+ +++ L EM+ D I + + L C
Sbjct: 1136 RSLYKSYFH-----HISSLC----KDGHLQESVHLLSEMEFEDFQIGPEIYG--ELLQGC 1184
Query: 136 VKLLNVGFGRQLHAFMVKTSN--DASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLI 193
V + G+Q+HA ++K + + + + L+ Y+KC E A R+F N+
Sbjct: 1185 VYERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVR-NVF 1243
Query: 194 SKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGEN 253
S A+V CR G +E+ L F+ M EN
Sbjct: 1244 SWAAIVGLQCRM--------------------------------GFSEDALLGFIEMQEN 1271
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA 313
GV + + L AC L+ + K +H +VLK G + FVSS +VD+Y KC
Sbjct: 1272 GVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKC------ 1325
Query: 314 ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE 373
G +E+AR+ FDS+ EKNVV W ++ GYV+ +
Sbjct: 1326 -------------------------GVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQ 1360
Query: 374 ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL 433
D+ + + EG+ + + L A A AL GK+ HA + + +D L S++
Sbjct: 1361 EAIDVFYD-MRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSI 1419
Query: 434 VDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDA 493
++ YSK G + AE++F +E+D+V +N++I+ Y H KA+ + M + ++ D+
Sbjct: 1420 INFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDS 1479
Query: 494 VTFVAILSAFRHCGSVEMGEK-----YFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
VT +ILSA ++++G++ ++ +D ++ +ID+Y + +++ A
Sbjct: 1480 VTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVA------NSIIDMYAKCERIDDA 1533
Query: 549 IEFMKSIPTEEDAVILGSFL 568
+ S TE D V+ + L
Sbjct: 1534 RKVFDST-TERDLVLWNTLL 1552
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 164/369 (44%), Gaps = 59/369 (15%)
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG- 289
IS ++G +E + L M + + L C R + ++IH+ +LKNG
Sbjct: 1146 ISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGD 1205
Query: 290 -LISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHF 348
N +V + +V Y KC+ A + VRN FS ++ IVG + E
Sbjct: 1206 FFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAA-IVGLQCRMGFSE----- 1259
Query: 349 DSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAAL 408
D+L G+++ Q + GV D +L +L AC +
Sbjct: 1260 DALL------------GFIEMQ--------------ENGVFPDNFVLPNVLKACGSLQLI 1293
Query: 409 HPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACY 468
GK +H Y+L+MG + S+LVDMY KCG + A +F + +E+++V +N MI Y
Sbjct: 1294 GLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGY 1353
Query: 469 AHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK-----YFNSMTADY 523
+G ++AI +F +M +GI+P VT + LSA + ++ G++ NS+ D
Sbjct: 1354 VQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDN 1413
Query: 524 KISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVI-------------LGSFLNV 570
+ + +I+ Y + +E A E + S E+D V +G LN+
Sbjct: 1414 ILG------SSIINFYSKVGLIEDA-ELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNM 1466
Query: 571 CRLNRNAEL 579
C L R+ L
Sbjct: 1467 CHLMRSENL 1475
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 132/288 (45%), Gaps = 46/288 (15%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
N+K H I+ L + N +I +Y+K + ++RK+FD ER++ WNT+++
Sbjct: 1494 NIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLA 1553
Query: 65 ACIKSHDLKQARSL-----FDSSPHKDLVTYNSMLCGYIN-------------------- 99
A + +A L FDS P +++++NS++ G++
Sbjct: 1554 AYAQVGLSGEALKLFYQMQFDSVP-PNVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQ 1612
Query: 100 --------------AEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR 145
G+ +A+ F +MQ A IR ++TS L C + ++ +GR
Sbjct: 1613 PNLITWTTLISGLAQSGFGYEAILFFQKMQEAG--IRPSIASITSVLLACTDIPSLWYGR 1670
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
+H F+ + S +SL+DMY+KC +EA +VF + + L NAM++A
Sbjct: 1671 AIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSK-ELPIYNAMISAYALH 1729
Query: 206 GEMEMALKTF---WRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
G+ AL F ++ D++++ +++S G EGL LF M
Sbjct: 1730 GQAVEALALFKHLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFADM 1777
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 188/658 (28%), Positives = 328/658 (49%), Gaps = 72/658 (10%)
Query: 19 AGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNV----FSWNTIISACIKSHDLKQ 74
+GL+ ++T L+ S LR+ ++L + + + +++ +KS D+++
Sbjct: 238 SGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEE 297
Query: 75 ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNL 134
A +FDS ++V +N ML Y + A + +F M +A +R ++FT L
Sbjct: 298 ALQIFDSGDRTNVVLWNLMLVAYGQIDDL-AKSFDIFYRMLAAG--VRPNKFTYPCMLRT 354
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
C +G G Q+H+ +K + + LIDMYSK ++A R+ + E+
Sbjct: 355 CTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEK----- 409
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
D VSW ++I+GYVQ+ +E L+ F M G
Sbjct: 410 ----------------------------DVVSWTSMIAGYVQHEFCKEALETFKEMQACG 441
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
+ + ASA+SAC G++ V +IH+ V +G ++ + +G+V +Y +C
Sbjct: 442 IWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARC------- 494
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEA 374
G +EA F+++ K + W L SG+ ++ E
Sbjct: 495 ------------------------GISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEE 530
Query: 375 LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLV 434
+ + + + G + V + A A A + GK+IHA +++ G + ++ + L+
Sbjct: 531 ALKVFMK-MDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALI 589
Query: 435 DMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAV 494
+Y KCG++ A++ F +R+ V +N +I C + HG +A+ LF++M ++G+KP V
Sbjct: 590 SLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDV 649
Query: 495 TFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKS 554
TFV +L+A H G VE G YF SM+ ++ I P DHYAC++D+ GRA QL++A F++
Sbjct: 650 TFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEE 709
Query: 555 IPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEM 614
+P D+++ + L+ C++++N E+ A + LL LE ++ A YV L+N YA G WA
Sbjct: 710 MPIPADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGKWASR 769
Query: 615 GRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
+IRK M+ + G SW+ V++ +H F VGD HP + IY+ L+ LY+I
Sbjct: 770 DQIRKIMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLADQIYNFLSHLNDRLYKIG 827
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 138/552 (25%), Positives = 237/552 (42%), Gaps = 110/552 (19%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +AI GL+ I N LI +Y+K +R +R++F+E+ R+ SW ++S
Sbjct: 65 HAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLS-------- 116
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
GY G +A++L+ EM + + + ++S L
Sbjct: 117 -----------------------GYAQ-NGLGEEAVRLYREMHRSG--VVPTPYVLSSIL 150
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C K GR +H + K + F ++LI +Y +CR + A RVF C
Sbjct: 151 SACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVF--CD----- 203
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+ C D+V++NTLISG+ Q G + L +F M
Sbjct: 204 ------MLYC--------------------DSVTFNTLISGHAQCGHGDRALGIFDEMQL 237
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+G+ + T AS L+AC + +++ K++HS++LK G+ + + ++D+Y K
Sbjct: 238 SGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVK------ 291
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G++EEA + FDS NVV+W + Y + +
Sbjct: 292 -------------------------SGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDL 326
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
FD+ + GV + +L C + G++IH+ ++ G Q D +
Sbjct: 327 AKSFDIFYRMLAA-GVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGV 385
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
L+DMYSK G + A+ I E+D+V + MIA Y H ++A+ F+EM GI PD
Sbjct: 386 LIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPD 445
Query: 493 AVTFVAILSAFRHCGSVEMGEK-----YFNSMTADYKISPETDHYACMIDLYGRANQLEK 547
+ + +SA +V G + Y + +AD I + ++ LY R ++
Sbjct: 446 NIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSI------WNGLVYLYARCGISKE 499
Query: 548 AIEFMKSIPTEE 559
A ++I +E
Sbjct: 500 AFSSFEAIEHKE 511
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 174/370 (47%), Gaps = 35/370 (9%)
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
I N ++ ++G + A + F + + D VSW ++SGY QNG EE ++L+ M
Sbjct: 78 IIGNLLIDLYAKKGFVRRARRVF-EELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHR 136
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+GV + +S LSAC + + IH V K G S FV + ++ +Y +C +
Sbjct: 137 SGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRL 196
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
A+ + +S + +++I G++ G+ + A FD +
Sbjct: 197 ADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQ-------------------- 236
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
G+ D++ + LL AC+ L GK++H+Y+L+ G+ +D + +
Sbjct: 237 ------------LSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGS 284
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
L+D+Y K G++ A IF + ++VL+N+M+ Y K+ +F ML G++P+
Sbjct: 285 LLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPN 344
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
T+ +L H G + +GE+ +S+T + +ID+Y + L+KA +
Sbjct: 345 KFTYPCMLRTCTHTGEIGLGEQ-IHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRIL 403
Query: 553 KSIPTEEDAV 562
I E+D V
Sbjct: 404 DMI-EEKDVV 412
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 150/337 (44%), Gaps = 44/337 (13%)
Query: 224 AVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGL-RNVKCAKEIH 282
A S+N ++G++ D E+ L LF + FA AL AC G R EIH
Sbjct: 6 AASFNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRGSGRRWPLVPEIH 65
Query: 283 SWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNME 342
+ + GL + + ++D+Y K + A + VR++ S +++ GY+ G E
Sbjct: 66 AKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGE 125
Query: 343 EARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGAC 402
EA R + + + GVV +L +L AC
Sbjct: 126 EAVRLYREM--------------------------------HRSGVVPTPYVLSSILSAC 153
Query: 403 ALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYN 462
G+ IH + + G + + + L+ +Y +C + A+ +F + + D V +N
Sbjct: 154 TKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFN 213
Query: 463 VMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFN----- 517
+I+ +A GH ++A+ +F+EM G+ PD+VT ++L+A G + G++ +
Sbjct: 214 TLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKA 273
Query: 518 SMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKS 554
M+ DY + ++DLY ++ +E+A++ S
Sbjct: 274 GMSLDYIME------GSLLDLYVKSGDIEEALQIFDS 304
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
++K+ H + IK G T T +N LI +Y K + +++ F EM +RN SWNTII+
Sbjct: 562 DIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIIT 621
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINA 100
C + +A LFD + L + G + A
Sbjct: 622 CCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTA 657
>gi|255576950|ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531180|gb|EEF33027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 683
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 185/621 (29%), Positives = 317/621 (51%), Gaps = 44/621 (7%)
Query: 54 RNVFSWNTIISACIKSHD--LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLF 111
+++ S N +++ C + L A +F + L+ YN ++ + Y+ L LF
Sbjct: 67 QDIVSLNKLMAFCTDPFNGNLNYAEKMFKYIRYPCLLIYNLIIKAFAKKGNYKR-TLVLF 125
Query: 112 IEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYS 171
+++ ++ + D FT L V +L + KT + + +SLIDMY+
Sbjct: 126 SKLR--EDGLWPDNFTYPFVFKAIGYLGEVSKAEKLRGLVTKTGLEFDTYVRNSLIDMYA 183
Query: 172 KCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLI 231
+ + +K + + D +SWN +I
Sbjct: 184 QLALTD---------------------------------VMKMLFDEMPDRDVISWNVMI 210
Query: 232 SGYVQNGDAEEGLKLFVRMGE-NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL 290
SGYV+ E+ + +F RM E +G+ +E T S LSAC L+ ++ K+IH +V ++ +
Sbjct: 211 SGYVKCRRFEDAINVFCRMQEESGLMPDEATVVSTLSACTALKRLELGKKIHHYV-RDNV 269
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
P + + ++D+YCKC ++ A ++ +N ++M+ GY+ G +EEAR F+
Sbjct: 270 KFTPIIGNALLDMYCKCGCLSIARAVFEEMPSKNVICWTTMVSGYANCGELEEARELFEG 329
Query: 351 LTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHP 410
++VV+WTA+ +GYV+ + L E ++ V D I+V LL CA A+
Sbjct: 330 SPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRK-VKPDKFIVVSLLTGCAQTGAIEQ 388
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
GK IH +I + +D + + L++MY+KCG + A IF +D + +I A
Sbjct: 389 GKWIHEFIDENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLRVKDTASWTSIICGLAM 448
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD 530
+G KA+ LF +M + G++PD +TF+ +LSA H G VE G K+FNSM +Y+I P+ +
Sbjct: 449 NGKTSKALELFSKMKQAGVRPDDITFIGVLSACSHGGLVEEGRKFFNSMRMEYQIKPKVE 508
Query: 531 HYACMIDLYGRANQLEKAIEFMKSIPTEEDAV---ILGSFLNVCRLNRNAELAGEAEEKL 587
HY C++DL GRA L +A E +K IP E A+ + GS L+ CR+ N E+ ++L
Sbjct: 509 HYGCLVDLLGRAGLLNEAEELIKKIPDENKAITVPLYGSLLSACRIYGNVEMGERVAKQL 568
Query: 588 LRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVG 647
++ E ++ + + LAN+YA W ++ ++R++M+ + + GCS + V+ IH F G
Sbjct: 569 VKFESSDSSVHTLLANIYAFADRWEDVTKVRRKMKDLGVKKTPGCSSIEVDSIIHEFFSG 628
Query: 648 DVSHPKTNAIYSVLAIFTGEL 668
SHP+ IY +L I L
Sbjct: 629 HPSHPEMREIYYMLNIMAKPL 649
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 129/499 (25%), Positives = 211/499 (42%), Gaps = 102/499 (20%)
Query: 18 KAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARS 77
K GL T N LI +Y++ L + LFDEMP+R+V SWN +IS
Sbjct: 165 KTGLEFDTYVRNSLIDMYAQLALTDVMKMLFDEMPDRDVISWNVMIS------------- 211
Query: 78 LFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVK 137
GY+ +E DA+ +F MQ + + DE TV STL+ C
Sbjct: 212 ------------------GYVKCRRFE-DAINVFCRMQE-ESGLMPDEATVVSTLSACTA 251
Query: 138 LLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNA 197
L + G+++H + V+ + + ++L+DMY KC C A VFE + N+I
Sbjct: 252 LKRLELGKKIHHY-VRDNVKFTPIIGNALLDMYCKCGCLSIARAVFEEMPSK-NVICWTT 309
Query: 198 MVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRW 257
MV+ GE+E A + F P + D V W +I+GYVQ +E + LF M V+
Sbjct: 310 MVSGYANCGELEEARELFEGSP-IRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKP 368
Query: 258 NEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESML 317
++ S L+ C ++ K IH ++ +N + + V + ++++Y KC
Sbjct: 369 DKFIVVSLLTGCAQTGAIEQGKWIHEFIDENRIPIDAVVGTALIEMYAKC---------- 418
Query: 318 LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFD 377
G +E+A F L K+ WT++ G +
Sbjct: 419 ---------------------GFIEKALEIFYGLRVKDTASWTSIICGLAMNGKTSKALE 457
Query: 378 LLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL--ISTLVD 435
L S+ + + GV D + + +L AC+ + G++ +RM Q+ K+ LVD
Sbjct: 458 LFSK-MKQAGVRPDDITFIGVLSACSHGGLVEEGRKFFNS-MRMEYQIKPKVEHYGCLVD 515
Query: 436 MYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVT 495
+ + G + AE + + + E KAI +
Sbjct: 516 LLGRAGLLNEAEELIKKIPD------------------ENKAITV-------------PL 544
Query: 496 FVAILSAFRHCGSVEMGEK 514
+ ++LSA R G+VEMGE+
Sbjct: 545 YGSLLSACRIYGNVEMGER 563
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 123/253 (48%), Gaps = 36/253 (14%)
Query: 17 IKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQAR 76
++ + T I N L+ +Y K L +R +F+EMP +NV W T++S +L++AR
Sbjct: 265 VRDNVKFTPIIGNALLDMYCKCGCLSIARAVFEEMPSKNVICWTTMVSGYANCGELEEAR 324
Query: 77 SLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCV 136
LF+ SP +D+V + +M+ GY+ ++ +A+ LF EMQ ++ D+F V S L C
Sbjct: 325 ELFEGSPIRDVVIWTAMINGYVQFNRFD-EAVALFREMQI--RKVKPDKFIVVSLLTGCA 381
Query: 137 KLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKN 196
+ + G+ +H F+ + ++LI+MY+KC E+A +F G
Sbjct: 382 QTGAIEQGKWIHEFIDENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGL---------- 431
Query: 197 AMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVR 256
+ D SW ++I G NG + L+LF +M + GVR
Sbjct: 432 -----------------------RVKDTASWTSIICGLAMNGKTSKALELFSKMKQAGVR 468
Query: 257 WNEHTFASALSAC 269
++ TF LSAC
Sbjct: 469 PDDITFIGVLSAC 481
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/446 (22%), Positives = 189/446 (42%), Gaps = 76/446 (17%)
Query: 155 SNDASGFAVSSLIDMYSKCRCYEEA----CRVFEGCTEEVNLISKNAMVAACCRE--GEM 208
+N +G + S I C+ ++F + +++S N ++A C G +
Sbjct: 29 TNPTTGLSQQSCISYLKSCKSMTHLKQIHAQIFRVGLHQ-DIVSLNKLMAFCTDPFNGNL 87
Query: 209 EMALKTF--WRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASAL 266
A K F R P L + +N +I + + G+ + L LF ++ E+G+ + T+
Sbjct: 88 NYAEKMFKYIRYPCL---LIYNLIIKAFAKKGNYKRTLVLFSKLREDGLWPDNFTYPFVF 144
Query: 267 SACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSF 326
A L V A+++ V K GL + +V + ++D+Y + + + M +L
Sbjct: 145 KAIGYLGEVSKAEKLRGLVTKTGLEFDTYVRNSLIDMYAQ---LALTDVMKML------- 194
Query: 327 SISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKE 386
FD + +++V+ W + SGYVK + E ++ +
Sbjct: 195 ---------------------FDEMPDRDVISWNVMISGYVKCRRFEDAINVFCRMQEES 233
Query: 387 GVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYA 446
G++ D +V L AC L GK+IH Y+ R V+ + + L+DMY KCG ++ A
Sbjct: 234 GLMPDEATVVSTLSACTALKRLELGKKIHHYV-RDNVKFTPIIGNALLDMYCKCGCLSIA 292
Query: 447 EIIFQNFIE-------------------------------RDLVLYNVMIACYAHHGHEE 475
+F+ RD+V++ MI Y +
Sbjct: 293 RAVFEEMPSKNVICWTTMVSGYANCGELEEARELFEGSPIRDVVIWTAMINGYVQFNRFD 352
Query: 476 KAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACM 535
+A+ LF EM + +KPD V++L+ G++E G K+ + + +I + +
Sbjct: 353 EAVALFREMQIRKVKPDKFIVVSLLTGCAQTGAIEQG-KWIHEFIDENRIPIDAVVGTAL 411
Query: 536 IDLYGRANQLEKAIEFMKSIPTEEDA 561
I++Y + +EKA+E + ++ A
Sbjct: 412 IEMYAKCGFIEKALEIFYGLRVKDTA 437
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 181/598 (30%), Positives = 304/598 (50%), Gaps = 71/598 (11%)
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
T+ S C D +R +FD K+L +N+++ Y E +E DA+ +F E+ S EH
Sbjct: 149 TMYSMCGSPSD---SRMVFDKLRRKNLFQWNAIVSAYTRNELFE-DAMSIFSELISVTEH 204
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
+ D FT+ + C LL++G G+ +H K + F ++LI MY KC EEA
Sbjct: 205 -KPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAV 263
Query: 181 -RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
RVF+ M KT SWN L+ GY QN D
Sbjct: 264 KRVFD------------------------LMDTKT---------VSSWNALLCGYAQNSD 290
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
+ L L+++M ++G+ + T S L AC ++++ +EIH + L+NGL +PF+
Sbjct: 291 PRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGIS 350
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
++ +Y C G A+ FD + +++V W
Sbjct: 351 LLSLYICC-------------------------------GKPFAAQVLFDGMEHRSLVSW 379
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
+ +GY + + +L + ++ +G+ + ++ + GAC+ +AL GKE+H + L
Sbjct: 380 NVMIAGYSQNGLPDEAINLFRQMLS-DGIQPYEIAIMCVCGACSQLSALRLGKELHCFAL 438
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
+ + D + S+++DMY+K G + ++ IF E+D+ +NV+IA Y HG ++A+
Sbjct: 439 KAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALE 498
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
LFE+ML G+KPD TF IL A H G VE G +YFN M + I P+ +HY C++D+
Sbjct: 499 LFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDML 558
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYV 599
GRA +++ A+ ++ +P + D+ I S L+ CR++ N L + KLL LE YV
Sbjct: 559 GRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYV 618
Query: 600 QLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
++N++A G W ++ R+R +M+ + + AGCSW+ V ++H F +GD P+ +
Sbjct: 619 LISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEV 676
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 135/564 (23%), Positives = 227/564 (40%), Gaps = 142/564 (25%)
Query: 4 LNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRES-RKLFDEMPERNVFSWNTI 62
L+L I H A K L N LI +Y K L+ E+ +++FD M + V SW
Sbjct: 222 LDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSW--- 278
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
N++LCGY AL L+++M D +
Sbjct: 279 ----------------------------NALLCGYAQNSDPRK-ALDLYLQM--TDSGLD 307
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
D FT+ S L C ++ ++ +G ++H F ++ F SL+ +Y C A +
Sbjct: 308 PDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVL 367
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
F+G E +L+S N M+A GY QNG +E
Sbjct: 368 FDG-MEHRSLVSWNVMIA--------------------------------GYSQNGLPDE 394
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
+ LF +M +G++ E AC L ++ KE+H + LK L + FVSS I+D
Sbjct: 395 AINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIID 454
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
+Y K G + ++R FD L EK+V W +
Sbjct: 455 MYAK-------------------------------GGCIGLSQRIFDRLREKDVASWNVI 483
Query: 363 FSGY-VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+GY + + EAL L E + + G+ D +L AC+ HA ++
Sbjct: 484 IAGYGIHGRGKEAL--ELFEKMLRLGLKPDDFTFTGILMACS-----------HAGLVED 530
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
G++ + +++ + IE L Y ++ G + A+ L
Sbjct: 531 GLEY-------------------FNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLI 571
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE-TDHYACMIDLY- 539
EEM PD+ + ++LS+ R G++ +GEK N + ++ PE ++Y + +L+
Sbjct: 572 EEMPG---DPDSRIWSSLLSSCRIHGNLGLGEKVANKL---LELEPEKPENYVLISNLFA 625
Query: 540 --GRANQLEKAIEFMKSIPTEEDA 561
G+ + + + MK I ++DA
Sbjct: 626 GSGKWDDVRRVRGRMKDIGLQKDA 649
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 2/193 (1%)
Query: 324 NSFSISSMIVG-YSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF 382
N F +++ I+ YS+ G+ ++R FD L KN+ W A+ S Y + + E + SE
Sbjct: 139 NDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSEL 198
Query: 383 VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGN 442
++ D L ++ ACA L G+ IH +M + D + + L+ MY KCG
Sbjct: 199 ISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGL 258
Query: 443 MTYA-EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
+ A + +F + + +N ++ YA + KA+ L+ +M + G+ PD T ++L
Sbjct: 259 VEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLL 318
Query: 502 AFRHCGSVEMGEK 514
A S+ GE+
Sbjct: 319 ACSRMKSLHYGEE 331
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 182/621 (29%), Positives = 310/621 (49%), Gaps = 69/621 (11%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
E++VF+ N ++ +K + A +F+ P D+V++N+++ G + G++ A++L +
Sbjct: 141 EKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCV-LNGHDHRAIELLL 199
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
+M+S+ + + F ++S L C GRQ+H FM+K + D+ + L+DMY+K
Sbjct: 200 QMKSSG--LVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAK 257
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
++A +VF+ + D + WN LIS
Sbjct: 258 NHFLDDAMKVFDWMSHR---------------------------------DLILWNALIS 284
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
G G +E +F + + G+ N T A+ L + L +++H+ K G I
Sbjct: 285 GCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIF 344
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
+ V +G++D Y KC ++ +A R F+ +
Sbjct: 345 DAHVVNGLIDSYWKCSCLS-------------------------------DAIRVFEECS 373
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
+++ T++ + + + E L E + K G+ D +L LL ACA +A GK
Sbjct: 374 SGDIIAVTSMITALSQCDHGEGAIKLFMEMLRK-GLEPDPFVLSSLLNACASLSAYEQGK 432
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
++HA++++ D + LV Y+KCG++ AE+ F + ER +V ++ MI A HG
Sbjct: 433 QVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHG 492
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
H ++A+ LF M+++GI P+ +T ++L A H G V+ ++YFNSM + I +HY
Sbjct: 493 HGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHY 552
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
+CMIDL GRA +L+ A+E + S+P + +A + G+ L R++++ EL A EKL LE
Sbjct: 553 SCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEP 612
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
+V LAN YA+ G W E+ ++RK M+ + SWV V+ ++H F VGD SHP
Sbjct: 613 EKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHP 672
Query: 653 KTNAIYSVLAIFTGELYEIAG 673
T IYS L G+L AG
Sbjct: 673 MTKEIYSKLDEL-GDLMSKAG 692
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 173/379 (45%), Gaps = 67/379 (17%)
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
+EF + L CV + G Q+HA + T + F ++L+ MY ++A RVF
Sbjct: 9 NEFALPVVLK-CVP--DAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVF 65
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
+ E N AVSWN L+S YV+N +
Sbjct: 66 DEAGSERN--------------------------------AVSWNGLMSAYVKNDQCGDA 93
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
+++F M +G++ E F+ ++AC G RN+ +++H+ V++ G + F ++ +VD+
Sbjct: 94 IQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDM 153
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y K ++ I+S+I F+ + + +VV W AL
Sbjct: 154 YVKMGRVD----------------IASVI---------------FEKMPDSDVVSWNALI 182
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
SG V + +LL + + G+V + +L +L ACA A G++IH ++++
Sbjct: 183 SGCVLNGHDHRAIELLLQ-MKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANA 241
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
D + LVDMY+K + A +F RDL+L+N +I+ +H G ++A +F
Sbjct: 242 DSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYG 301
Query: 484 MLEKGIKPDAVTFVAILSA 502
+ ++G+ + T A+L +
Sbjct: 302 LRKEGLGVNRTTLAAVLKS 320
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 5/107 (4%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H IK N L++ Y+K + ++ F +PER V SW+ +I +
Sbjct: 435 HAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHG 494
Query: 73 KQARSLF----DSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQ 115
K+A LF D + + +T S+LC N G +A + F M+
Sbjct: 495 KRALELFGRMVDEGINPNHITMTSVLCA-CNHAGLVDEAKRYFNSMK 540
>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
Length = 658
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 194/656 (29%), Positives = 313/656 (47%), Gaps = 104/656 (15%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACI 67
+ L+ H +K G N LI Y+K N + ++ +FDEMP+R++ SWN+II C
Sbjct: 2 DGLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGC- 60
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFT 127
+ L+D A++LF+ M E +D T
Sbjct: 61 ------ASNGLYDK-------------------------AVELFVRMWL--EGQELDSTT 87
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
+ S + CV+ G +H + V+T + ++L+DMYS C + ++F
Sbjct: 88 LLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKIFR--- 144
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
N+ KN + SW +I+ Y + G ++ LF
Sbjct: 145 ---NMEQKNVV---------------------------SWTAMITSYTRAGHFDKVAGLF 174
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
MG G+R + SAL A G ++K K +H + ++NG+ V++ ++++Y KC
Sbjct: 175 QEMGLEGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKC 234
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
G MEEAR FD +T+K+ + W L GY
Sbjct: 235 -------------------------------GYMEEARFIFDHVTKKDTISWNTLIGGYS 263
Query: 368 KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDK 427
++ F L +E + + + +A+ + +L A A ++L G+E+HAY +R G D
Sbjct: 264 RSNLANEAFTLFNEMLLQ--LRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLEDN 321
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
+ + LVDMY KCG + A +F ++L+ + +MIA Y HG AI LFE+M
Sbjct: 322 FVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGS 381
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEK 547
GI+PDA +F AIL A H G + G ++FN+M +++I P+ HYACM+DL L++
Sbjct: 382 GIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKE 441
Query: 548 AIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAA 607
A EF++++P E D+ I S L CR++RN +LA + E + LE N YV LAN+YA
Sbjct: 442 AYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAEMVFELEPENTGYYVLLANIYAE 501
Query: 608 EGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
W + +++ ++ RG++ N GCSW+ V + HIF + +HP+ I L
Sbjct: 502 AERWEAVRKLKNKVGGRGLREN--TGCSWIEVRGKAHIFFAENRNHPQGMRIAEFL 555
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 154/386 (39%), Gaps = 87/386 (22%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+LK H AI+ G+ N L+ +Y K + E+R +FD + +++ SWNT+I
Sbjct: 201 SLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIG 260
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
+S+ +A +LF N ML +R +
Sbjct: 261 GYSRSNLANEAFTLF-----------NEMLL------------------------QLRPN 285
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
T+ L L ++ GR++HA+ V+ F ++L+DMY KC A R+F+
Sbjct: 286 AVTMACILPAAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFD 345
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
T + NLI SW +I+GY +G + +
Sbjct: 346 MLTNK-NLI--------------------------------SWTIMIAGYGMHGRGRDAI 372
Query: 245 KLFVRMGENGVRWNEHTFASALSAC--CGLRNVKCAKEIHSWVLKNGLISNPFVSSGI-- 300
LF +M +G++ + +F++ L AC GLR+ W N + + + +
Sbjct: 373 ALFEQMKGSGIQPDAGSFSAILYACSHSGLRD-------EGWRFFNAMRNEHRIEPKLKH 425
Query: 301 ----VDVYCKCENMNYAESMLLLKGVRNSFSI-SSMIVGYSLQGNMEEARRHFD---SLT 352
VD+ C N+ A + + SI S++ G + N++ A + + L
Sbjct: 426 YACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAEMVFELE 485
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDL 378
+N + L + Y +A+ EA+ L
Sbjct: 486 PENTGYYVLLANIYAEAERWEAVRKL 511
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 199/659 (30%), Positives = 323/659 (49%), Gaps = 75/659 (11%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIH--IYSKHNLLRESRKLFDEMPERNVFSWNTII 63
L+ + H Q IK GL T ++LI + S H FD +P
Sbjct: 15 LQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPH---------FDGLP----------- 54
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
A S+F++ +L+ +N+M G+ + AL L++ M S +
Sbjct: 55 ----------YAISVFETIQEPNLLIWNTMFRGHALSSD-PVSALYLYVCMISLG--LLP 101
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
+ +T L C K G+Q+H ++K D + +SLI MY + E+A +VF
Sbjct: 102 NCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVF 161
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
+ + +++S A++ +G + A K F P + D VSWN +ISGY + G+ +E
Sbjct: 162 DQSSHR-DVVSYTALITGYASKGYIASAQKMFDEIP-IKDVVSWNAMISGYAETGNNKEA 219
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
L+LF M + VR +E T S +SAC +++ +++HSW+ +G SN + + ++D+
Sbjct: 220 LELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDL 279
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y KC G +E A F+ L+ K+V+ W L
Sbjct: 280 YIKC-------------------------------GEVETACGLFEGLSYKDVISWNTLI 308
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM-- 421
GY + L E + + G + + ++ +L ACA A+ G+ IH YI +
Sbjct: 309 GGYTHMNLYKEALLLFQEML-RSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLK 367
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
GV ++L+DMY+KCG++ A+ +F + + R L +N MI +A HG A +F
Sbjct: 368 GVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIF 427
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGR 541
M + I+PD +TFV +LSA H G +++G F SM DYKI+P+ +HY CMIDL G
Sbjct: 428 SRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGH 487
Query: 542 ANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQL 601
+ ++A E + ++ E D VI S L C++ N EL + L+++E N YV L
Sbjct: 488 SGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLL 547
Query: 602 ANVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
+N+YA G W E+ +IR + +GMK + GCS + ++ +H F +GD HP+ IY
Sbjct: 548 SNIYATAGRWNEVAKIRALLNDKGMK--KVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 604
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 161/600 (26%), Positives = 259/600 (43%), Gaps = 129/600 (21%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
+S +E H +K G L LI +Y ++ L ++RK+FD+ R+V S+
Sbjct: 115 KSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTA 174
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I+ + A+ +FD P KD+V++N+M+ GY G +AL+LF EM + +
Sbjct: 175 LITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAET-GNNKEALELFKEMMKTN--V 231
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFA-----VSSLIDMYSKCRCY 176
R DE T+ S ++ C + ++ GRQ+H+++ D GF V++LID+Y KC
Sbjct: 232 RPDESTMVSVVSACAQSASIELGRQVHSWI-----DDHGFGSNLKIVNALIDLYIKCGEV 286
Query: 177 EEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQ 236
E AC +FEG + D +SWNTLI GY
Sbjct: 287 ETACGLFEGLS---------------------------------YKDVISWNTLIGGYTH 313
Query: 237 NGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFV 296
+E L LF M +G N+ T S L AC L ++ + IH ++ K
Sbjct: 314 MNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKR-------- 365
Query: 297 SSGIVDVYCKCENMNYAESMLLLKGVRNSFS-ISSMIVGYSLQGNMEEARRHFDSLTEKN 355
LKGV N+ S +S+I Y+ G++E A++ FDS+ ++
Sbjct: 366 ----------------------LKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRS 403
Query: 356 VVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIH 415
+ W A+ G+ A FD+ S + K + D + V LL AC+ L G+
Sbjct: 404 LSSWNAMIFGFAMHGRANAAFDIFSR-MRKNEIEPDDITFVGLLSACSHSGMLDLGR--- 459
Query: 416 AYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEE 475
+I R ++ D K+ L Y MI H G +
Sbjct: 460 -HIFR-SMKEDYKITPKLEH-------------------------YGCMIDLLGHSGLFK 492
Query: 476 KAILLFEEMLEK-GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD-HYA 533
+A EEM+ ++PD V + ++L A + +VE+GE Y ++ KI P+ Y
Sbjct: 493 EA----EEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLI---KIEPKNPGSYV 545
Query: 534 CMIDLY---GRANQLEKAIEF-----MKSIP----TEEDAVILGSFLNVCRLNRNAELAG 581
+ ++Y GR N++ K MK +P E D+V+ + RN E+ G
Sbjct: 546 LLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYG 605
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 185/599 (30%), Positives = 308/599 (51%), Gaps = 80/599 (13%)
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
K R +F+ ++DL+ +N+M+ G +E +A +++ +MQ E + ++ T L
Sbjct: 397 KDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWE-EASEIYHQMQR--EGMMPNKITYVILL 453
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVS---SLIDMYSKCRCYEEACRVFEGCTEE 189
N CV + +GR++H+ +VK D F +S +LI MY++C ++A +F
Sbjct: 454 NACVNPTALHWGREIHSRVVK---DGFMFDISVQNALISMYARCGSIKDARLLF------ 504
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
N MV D +SW +I G ++G E L +F
Sbjct: 505 ------NKMVR---------------------KDIISWTAMIGGLAKSGLGAEALAVFQD 537
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
M + G++ N T+ S L+AC + + IH V++ GL ++ V++ +V++Y C
Sbjct: 538 MQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMC-- 595
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK- 368
G++++AR+ FD +T++++V + A+ GY
Sbjct: 596 -----------------------------GSVKDARQVFDRMTQRDIVAYNAMIGGYAAH 626
Query: 369 --AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMD 426
+ LFD L E EG+ D + + +L ACA +L KEIH+ +L+ G D
Sbjct: 627 NLGKEALKLFDRLQE----EGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSD 682
Query: 427 KKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
L + LV Y+KCG+ + A ++F ++R+++ +N +I A HG + + LFE M
Sbjct: 683 TSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKM 742
Query: 487 KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLE 546
+GIKPD VTFV++LSA H G +E G +YF SM+ D+ I+P +HY CM+DL GRA QL+
Sbjct: 743 EGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLD 802
Query: 547 KAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYA 606
+ +K++P + + I G+ L CR++ N +A A E L+L+ +N A YV L+++YA
Sbjct: 803 EVEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYA 862
Query: 607 AEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFT 665
A G W ++RK M + G SW+ V ++H F D SHP++ IY+ L T
Sbjct: 863 AAGMWDSAAKLRKLMEQRGVTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAELDKLT 921
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 144/617 (23%), Positives = 256/617 (41%), Gaps = 144/617 (23%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEM--PERNVFSWNTIISACIKSH 70
H I+ L T N LI++Y + + E+R++++++ ER V SW
Sbjct: 164 HEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNHTERTVHSW----------- 212
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
N+M+ GY+ GY +ALKL EMQ + + T
Sbjct: 213 --------------------NAMVVGYVQY-GYIEEALKLLREMQQ--HGLALGRATTMR 249
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L+ C + GR++H +K + +++MY+KC EA VF+
Sbjct: 250 LLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFD------ 303
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
+ E VSW +I GY G +E ++F +M
Sbjct: 304 ---------------------------KMETKSVVSWTIIIGGYADCGHSEIAFEIFQKM 336
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
+ GV N T+ + L+A G +K K +HS +L G S+ V + +V +Y KC
Sbjct: 337 QQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKC--- 393
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
G+ ++ R+ F+ L ++++ W + G +
Sbjct: 394 ----------------------------GSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGG 425
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
N E ++ + + +EG++ + + VILL AC ALH G+EIH+ +++ G D +
Sbjct: 426 NWEEASEIYHQ-MQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQ 484
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+ L+ MY++CG++ A ++F + +D++ + MI A G +A+ +F++M + G+K
Sbjct: 485 NALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLK 544
Query: 491 PDAVTFVAILSA-----------------------------------FRHCGSVEMGEKY 515
P+ VT+ +IL+A + CGSV+ +
Sbjct: 545 PNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQV 604
Query: 516 FNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE---EDAVILGSFLNVCR 572
F+ MT ++ Y MI Y N ++A++ + E D V + LN C
Sbjct: 605 FDRMTQRDIVA-----YNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACA 659
Query: 573 LNRNAELAGEAEEKLLR 589
+ + E A E +L+
Sbjct: 660 NSGSLEWAKEIHSLVLK 676
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 206/442 (46%), Gaps = 76/442 (17%)
Query: 111 FIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMY 170
+++ Q A R++ L C+++ ++ GR++H +++ + V++LI+MY
Sbjct: 131 YLQQQGA----RVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMY 186
Query: 171 SKCRCYEEACRVFEGCTE-EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNT 229
+C EEA +V+ E + S NAMV
Sbjct: 187 IQCGSIEEARQVWNKLNHTERTVHSWNAMVV----------------------------- 217
Query: 230 LISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG 289
GYVQ G EE LKL M ++G+ T LS+C ++C +EIH +K
Sbjct: 218 ---GYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKAR 274
Query: 290 LISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFD 349
L+ + V++ I+++Y KC G++ EAR FD
Sbjct: 275 LLFDVNVANCILNMYAKC-------------------------------GSIHEAREVFD 303
Query: 350 SLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALH 409
+ K+VV WT + GY + E F++ + + +EGVV + + + +L A + AAL
Sbjct: 304 KMETKSVVSWTIIIGGYADCGHSEIAFEIFQK-MQQEGVVPNRITYINVLNAFSGPAALK 362
Query: 410 PGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYA 469
GK +H++IL G + D + + LV MY+KCG+ +F+ + RDL+ +N MI A
Sbjct: 363 WGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLA 422
Query: 470 HHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTAD---YKIS 526
G+ E+A ++ +M +G+ P+ +T+V +L+A + ++ G + + + D + IS
Sbjct: 423 EGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDIS 482
Query: 527 PETDHYACMIDLYGRANQLEKA 548
+ +I +Y R ++ A
Sbjct: 483 VQN----ALISMYARCGSIKDA 500
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 122/235 (51%), Gaps = 15/235 (6%)
Query: 381 EFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC 440
+++ ++G ++ + +L C L G+E+H +I++ +D+ ++ L++MY +C
Sbjct: 130 QYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQC 189
Query: 441 GNMTYAEIIFQ--NFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVA 498
G++ A ++ N ER + +N M+ Y +G+ E+A+ L EM + G+ T +
Sbjct: 190 GSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMR 249
Query: 499 ILSAFRHCGSVEMG-EKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPT 557
+LS+ + ++E G E + +M A ++ + + C++++Y + + +A E + T
Sbjct: 250 LLSSCKSPSALECGREIHVEAMKA--RLLFDVNVANCILNMYAKCGSIHEAREVFDKMET 307
Query: 558 EED---AVILGSFLNVCRLNRNAELAGEAEEKLLRLEG--NNKARYVQLANVYAA 607
+ +I+G + + ++E+A E +K ++ EG N+ Y+ + N ++
Sbjct: 308 KSVVSWTIIIGGYADCG----HSEIAFEIFQK-MQQEGVVPNRITYINVLNAFSG 357
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 13/124 (10%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K G T N L+ Y+K ++ +FD+M +RNV SWN II C +
Sbjct: 671 HSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRG 730
Query: 73 KQARSLFD----SSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
+ LF+ D+VT+ S+L +A G + + F M +F +
Sbjct: 731 QDVLQLFERMKMEGIKPDIVTFVSLLSACSHA-GLLEEGRRYFCSMSR--------DFGI 781
Query: 129 TSTL 132
T T+
Sbjct: 782 TPTI 785
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 201/664 (30%), Positives = 315/664 (47%), Gaps = 78/664 (11%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +G N L+ +Y + +R++FDEM ER V
Sbjct: 168 HAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGV---------------- 211
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
DLV++NS++ Y+ G A+K+F E + D IR D ++ + L
Sbjct: 212 ------------GDLVSWNSIVAAYMQG-GDSIRAMKMF-ERMTEDLGIRPDAVSLVNVL 257
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C + G+Q+H + +++ F ++++DMY+KC EEA +VFE + ++
Sbjct: 258 PACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVK-DV 316
Query: 193 ISKNAMVAACCREGEMEMALKTFWR----QPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
+S NAMV + G + AL F + + ELN V+W+ +I+GY Q G E L +F
Sbjct: 317 VSWNAMVTGYSQIGRFDDALGLFEKIREEKIELN-VVTWSAVIAGYAQRGLGFEALDVFR 375
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCAKEIH----SWVL---KNGLISNPFVSSGIV 301
+M G N T S LS C + KE H W+L +N + V + ++
Sbjct: 376 QMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALI 435
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKN--VVVW 359
D+Y KC++ A +M FD + K+ VV W
Sbjct: 436 DMYSKCKSPKAARAM-------------------------------FDLIPPKDRSVVTW 464
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEG-VVTDALILVILLGACALQAALHPGKEIHAYI 418
T L G + +L S+ + + V+ +A + L ACA AL G++IHAY+
Sbjct: 465 TVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYV 524
Query: 419 LRMGVQMDKKLIST-LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
LR + ++ L+DMYSK G++ A ++F N +R+ V + ++ Y HG E+A
Sbjct: 525 LRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEA 584
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID 537
+ +F EM + + PD VTFV +L A H G V+ G YFN M D+ + P +HYACM+D
Sbjct: 585 LQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVD 644
Query: 538 LYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKAR 597
L RA +L++A+E ++ +P + + + L+ CR+ N EL A +LL LE N
Sbjct: 645 LLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGS 704
Query: 598 YVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
Y L+N+YA W ++ RIR M+ + GCSWV F GD SHP + I
Sbjct: 705 YTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQI 764
Query: 658 YSVL 661
Y +L
Sbjct: 765 YDLL 768
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 128/464 (27%), Positives = 223/464 (48%), Gaps = 51/464 (10%)
Query: 102 GYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGF 161
G+ D L+L+ MQ R D +T L C ++ + G +HA + + + + F
Sbjct: 124 GFLEDVLQLYRRMQRLG--WRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVF 181
Query: 162 AVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPEL 221
+ L+ MY +C +E A +VF+ EM R+ +
Sbjct: 182 VGNGLVSMYGRCGAWENARQVFD------------------------EM------RERGV 211
Query: 222 NDAVSWNTLISGYVQNGDAEEGLKLFVRMGEN-GVRWNEHTFASALSACCGLRNVKCAKE 280
D VSWN++++ Y+Q GD+ +K+F RM E+ G+R + + + L AC + K+
Sbjct: 212 GDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQ 271
Query: 281 IHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGN 340
+H + L++GL + FV + +VD+Y KC M A + V++ S ++M+ GYS G
Sbjct: 272 VHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGR 331
Query: 341 MEEARRHFDSLTEK----NVVVWTALFSGYV-KAQNCEALFDLLSEFVTKEGVVTDALIL 395
++A F+ + E+ NVV W+A+ +GY + EAL D+ + + G + + L
Sbjct: 332 FDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEAL-DVFRQMLLC-GSEPNVVTL 389
Query: 396 VILLGACALQAALHPGKEIHAYILRMGVQMDKK-------LISTLVDMYSKCGNMTYAEI 448
V LL CA L GKE H + ++ + +D+ +I+ L+DMYSKC + A
Sbjct: 390 VSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARA 449
Query: 449 IFQNFIERD--LVLYNVMIACYAHHGHEEKAILLFEEMLEKG--IKPDAVTFVAILSAFR 504
+F +D +V + V+I A HG +A+ LF +ML+ + P+A T L A
Sbjct: 450 MFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACA 509
Query: 505 HCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
G++ G + + + S C+ID+Y ++ ++ A
Sbjct: 510 RLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAA 553
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 140/293 (47%), Gaps = 34/293 (11%)
Query: 218 QPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKC 277
P + WN LI V G E+ L+L+ RM G R + +TF L AC + + +C
Sbjct: 104 HPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRC 163
Query: 278 AKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSL 337
+H+ V +G N FV +G+V +Y +C
Sbjct: 164 GASVHAVVFASGFEWNVFVGNGLVSMYGRC------------------------------ 193
Query: 338 QGNMEEARRHFDSLTEKNV---VVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALI 394
G E AR+ FD + E+ V V W ++ + Y++ + + G+ DA+
Sbjct: 194 -GAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVS 252
Query: 395 LVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFI 454
LV +L ACA A GK++H Y LR G+ D + + +VDMY+KCG M A +F+
Sbjct: 253 LVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMK 312
Query: 455 ERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCG 507
+D+V +N M+ Y+ G + A+ LFE++ E+ I+ + VT+ A+++ + G
Sbjct: 313 VKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRG 365
>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 853
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 182/600 (30%), Positives = 301/600 (50%), Gaps = 69/600 (11%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N+++S K A LF D VT+N M+ GY+ + G ++L F EM S+
Sbjct: 274 NSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQS-GLMEESLIFFYEMISSG- 331
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
+ D T +S L K N+ + RQ+H ++++ S F S+LID Y KCR A
Sbjct: 332 -VLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMA 390
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
++F C D V + +ISGY+ NG
Sbjct: 391 QKIFSQCNSV---------------------------------DVVVFTAMISGYLHNGL 417
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
+ L++F + + + NE T S L GL +K +E+H +++K G + +
Sbjct: 418 NIDALEMFRWLVKVKISPNEITLVSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCA 477
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
++D+Y KC MN A + F L+++++V W
Sbjct: 478 VIDMYAKCGRMNLAYEI-------------------------------FGRLSKRDIVSW 506
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
++ + ++ N A D+ + + G+ D + + L ACA + GK IH +++
Sbjct: 507 NSMITRCAQSDNPSAAIDIFRQ-MGVSGICFDCVSISAALSACANLPSESFGKAIHGFMI 565
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
+ + +D STL+DMY+KCGN+ A +F E+++V +N +IA Y +HG + ++
Sbjct: 566 KHSLALDVYSESTLIDMYAKCGNLKAAMNVFDTMKEKNIVSWNSIIAAYGNHGKLKDSLC 625
Query: 480 LFEEMLEK-GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
LF EM+EK G +PD +TF+ I+S H G V+ G ++F SMT DY I P+ +HYAC++DL
Sbjct: 626 LFHEMVEKSGNRPDQITFLEIISLCCHVGDVDEGVRFFRSMTQDYGIQPQQEHYACVVDL 685
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARY 598
+GRA +L +A E +KS+P DA + G+ L RL++N ELA A +L+ L+ N Y
Sbjct: 686 FGRAGRLSEAYETVKSMPFPPDAGVWGTLLGASRLHKNVELAKVASSRLMDLDPWNSGYY 745
Query: 599 VQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
V ++N +A G W + ++R M+ + + G SW+ + H+F GDV+HP+++ IY
Sbjct: 746 VLISNAHANTGEWESVTKVRSLMKEREVQKIPGYSWIEINKITHLFVSGDVNHPESSHIY 805
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 142/549 (25%), Positives = 243/549 (44%), Gaps = 83/549 (15%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
N F +++I A ++ + A LFD KD V +N ML GY G +K F M
Sbjct: 168 NEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKC-GASDSVIKGFSLM 226
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
+ + I + T L++C L + G QLH +V + D G +SL+ MYSKC
Sbjct: 227 RM--DQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKCG 284
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
+++A ++F R D V+WN +ISGY
Sbjct: 285 RFDDAIKLF---------------------------------RMMSRADTVTWNCMISGY 311
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
VQ+G EE L F M +GV + TF+S L + N++ ++IH +++++ + +
Sbjct: 312 VQSGLMEESLIFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDI 371
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
F++S ++D Y KC ++ A+ + F
Sbjct: 372 FLTSALIDAYFKCRGVSMAQKI-------------------------------FSQCNSV 400
Query: 355 NVVVWTALFSGYV-KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
+VVV+TA+ SGY+ N +AL + ++ K + + + LV +L AL G+E
Sbjct: 401 DVVVFTAMISGYLHNGLNIDAL--EMFRWLVKVKISPNEITLVSILPVIGGLLALKLGRE 458
Query: 414 IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH 473
+H +I++ G + ++DMY+KCG M A IF +RD+V +N MI A +
Sbjct: 459 LHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSKRDIVSWNSMITRCAQSDN 518
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA 533
AI +F +M GI D V+ A LSA + S G K + + ++ + +
Sbjct: 519 PSAAIDIFRQMGVSGICFDCVSISAALSACANLPSESFG-KAIHGFMIKHSLALDVYSES 577
Query: 534 CMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFL-----------NVCRLNRNAELAGE 582
+ID+Y + L+ A+ ++ E++ V S + ++C + E +G
Sbjct: 578 TLIDMYAKCGNLKAAMNVFDTM-KEKNIVSWNSIIAAYGNHGKLKDSLCLFHEMVEKSGN 636
Query: 583 AEEKLLRLE 591
+++ LE
Sbjct: 637 RPDQITFLE 645
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/446 (23%), Positives = 195/446 (43%), Gaps = 72/446 (16%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKL----FDEMPERNVFSWNT 61
++E+LI + I +G+ IT + L+ SK L R++ ++F +
Sbjct: 317 MEESLIFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSA 376
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I A K + A+ +F D+V + +M+ GY++ G DAL++F + I
Sbjct: 377 LIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMISGYLH-NGLNIDALEMFRWLVKV--KI 433
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+E T+ S L + LL + GR+LH F++K D ++IDMY+KC
Sbjct: 434 SPNEITLVSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKC-------- 485
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
G M +A + F R + D VSWN++I+ Q+ +
Sbjct: 486 ------------------------GRMNLAYEIFGRLSK-RDIVSWNSMITRCAQSDNPS 520
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
+ +F +MG +G+ ++ + ++ALSAC L + K IH +++K+ L + + S ++
Sbjct: 521 AAIDIFRQMGVSGICFDCVSISAALSACANLPSESFGKAIHGFMIKHSLALDVYSESTLI 580
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D+Y KC GN++ A FD++ EKN+V W +
Sbjct: 581 DMYAKC-------------------------------GNLKAAMNVFDTMKEKNIVSWNS 609
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG-KEIHAYILR 420
+ + Y + L E V K G D + + ++ C + G + +
Sbjct: 610 IIAAYGNHGKLKDSLCLFHEMVEKSGNRPDQITFLEIISLCCHVGDVDEGVRFFRSMTQD 669
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYA 446
G+Q ++ + +VD++ + G ++ A
Sbjct: 670 YGIQPQQEHYACVVDLFGRAGRLSEA 695
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 163/386 (42%), Gaps = 69/386 (17%)
Query: 122 RMDEFTVTSTLNL----CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYE 177
R E T+ L+L C L + G+Q+HAF++ + ++ MY+ C
Sbjct: 24 RFLEETLPRRLSLLLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMC---- 79
Query: 178 EACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWR-QPELNDAVSWNTLISGYVQ 236
G K F+R L+ WN++IS +V+
Sbjct: 80 ----------------------------GSFSNCGKMFYRLDSRLSSIRPWNSIISSFVR 111
Query: 237 NGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFV 296
G + L + +M GV + TF + AC L+N K + + V G+ N FV
Sbjct: 112 MGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIEFLSDTVSSLGMDCNEFV 171
Query: 297 SSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNV 356
+S ++ Y + G ++ A + FD + +K+
Sbjct: 172 ASSLIKAYLE-------------------------------YGKIDVAGKLFDRVLQKDC 200
Query: 357 VVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHA 416
V+W + +GY K +++ S + + + +A+ +L CA + + G ++H
Sbjct: 201 VIWNVMLNGYAKCGASDSVIKGFS-LMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHG 259
Query: 417 YILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
++ G+ + + ++L+ MYSKCG A +F+ D V +N MI+ Y G E+
Sbjct: 260 LVVVSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEE 319
Query: 477 AILLFEEMLEKGIKPDAVTFVAILSA 502
+++ F EM+ G+ PDA+TF ++L +
Sbjct: 320 SLIFFYEMISSGVLPDAITFSSLLPS 345
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/309 (20%), Positives = 121/309 (39%), Gaps = 41/309 (13%)
Query: 252 ENGVRWNEHTFASALSA----CCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
N R+ E T LS C L ++ K++H++V+ N + + + I+ +Y C
Sbjct: 20 RNSYRFLEETLPRRLSLLLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMC 79
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
+ + M Y L + R W ++ S +V
Sbjct: 80 GSFSNCGKMF-----------------YRLDSRLSSIRP------------WNSIISSFV 110
Query: 368 KAQNCEALFDLLSEFVTKE---GVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
+ L + F K GV D L+ AC + + + +G+
Sbjct: 111 RM----GLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIEFLSDTVSSLGMD 166
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
++ + S+L+ Y + G + A +F +++D V++NVM+ YA G + I F M
Sbjct: 167 CNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGASDSVIKGFSLM 226
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
I P+AVTF +LS +++G + + + + E ++ +Y + +
Sbjct: 227 RMDQISPNAVTFDCVLSVCASKLLIDLGVQ-LHGLVVVSGLDFEGSIKNSLLSMYSKCGR 285
Query: 545 LEKAIEFMK 553
+ AI+ +
Sbjct: 286 FDDAIKLFR 294
>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 998
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 211/696 (30%), Positives = 339/696 (48%), Gaps = 111/696 (15%)
Query: 7 KEALICHVQAIKAGLTL-TTITTNQLIHIYSKHNLLRESRKLFDEMPERNV----FSWNT 61
K A I + + GL + T+ T +I YSK + S KLFD+M E +V + ++
Sbjct: 188 KHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSS 247
Query: 62 IISACI-----------------------------------KSHDLKQARSLFDSSPHKD 86
++SAC+ K H ++ R LFD K+
Sbjct: 248 VLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKN 307
Query: 87 LVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQ 146
+V++ +++ G + + DAL LF+EM A D F TS LN C L+ + GRQ
Sbjct: 308 VVSWTTVIAGCMQ-NSFHRDALDLFVEM--ARMGWNPDAFGCTSVLNSCGSLVALEKGRQ 364
Query: 147 LHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREG 206
+HA+ +K + D F + LIDMY+KC +A +VF N M A
Sbjct: 365 VHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVF------------NLMAAI----- 407
Query: 207 EMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASAL 266
D VS+N +I GY + E L LF M + F S L
Sbjct: 408 ----------------DLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLL 451
Query: 267 SACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSF 326
L +++ + +IH ++K G+ + F S ++DVY KC +
Sbjct: 452 GVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVG--------------- 496
Query: 327 SISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK-AQNCEALFDLLSEFVTK 385
+AR F+ + +K++VVWTA+FSGY + ++N E+L L + +
Sbjct: 497 ----------------DARLVFEEIQDKDIVVWTAMFSGYTQQSENEESL--KLYKCLQM 538
Query: 386 EGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTY 445
+ + ++ A + A+L G++ H +++MG D + +TLVDMY+K G++
Sbjct: 539 SRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEE 598
Query: 446 AEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRH 505
A F + +D +N MIA YA HG EKA+ +FE+M+ +G+KP+ VTFV +LSA H
Sbjct: 599 AHKAFISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACSH 658
Query: 506 CGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILG 565
G +++G +F+SM+ + I P +HY CM+ L GRA +L +A EF++ +P ++ AV+
Sbjct: 659 TGLLDLGFDHFDSMS-QFGIEPGIEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAVVWR 717
Query: 566 SFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMK 625
S L+ CR++ N EL A E + + YV L+N++A++G W + R+R++M
Sbjct: 718 SLLSACRVSGNVELGTYAAEMAISCNPADSGSYVLLSNIFASKGMWVNVRRLREKMDISG 777
Query: 626 GNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+ GCSW+ V +EIH F D +H + I VL
Sbjct: 778 VVKEPGCSWIEVNNEIHKFIAKDTAHRDSAPISLVL 813
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 136/527 (25%), Positives = 250/527 (47%), Gaps = 70/527 (13%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
+ ++F NT++ A K + + A LFD+ HK+LVT++SM+ Y + + +AL LF+
Sbjct: 71 KHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTH-HSHCLEALMLFV 129
Query: 113 E-MQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYS 171
+ M+S +E + +E+ + S + C + + Q+H +VK + +SLID Y+
Sbjct: 130 QFMRSCNE--KPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYT 187
Query: 172 KCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLI 231
K C ++A +F+G + +KT + +W T+I
Sbjct: 188 KHACIDDARLLFDG------------------------LQVKT---------SFTWTTII 214
Query: 232 SGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI 291
+GY + G ++ LKLF +M E V +++ +S LSAC L+ ++ K+IH +VL++G++
Sbjct: 215 AGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIV 274
Query: 292 SNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL 351
+ + +G +D Y KC ++ R+ FD +
Sbjct: 275 MDVSMVNGFIDFYFKCH-------------------------------KVQLGRKLFDRM 303
Query: 352 TEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG 411
+KNVV WT + +G ++ DL E + + G DA +L +C AL G
Sbjct: 304 VDKNVVSWTTVIAGCMQNSFHRDALDLFVE-MARMGWNPDAFGCTSVLNSCGSLVALEKG 362
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
+++HAY +++ + D + + L+DMY+KC ++T A +F DLV YN MI Y+
Sbjct: 363 RQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQ 422
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH 531
+A+ LF EM P + FV++L +E+ + + + Y +S +
Sbjct: 423 DKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQ-IHGLIIKYGVSLDEFA 481
Query: 532 YACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAE 578
+ +ID+Y + +++ A + I ++ V F + + N E
Sbjct: 482 GSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEE 528
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 146/607 (24%), Positives = 270/607 (44%), Gaps = 113/607 (18%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L AL H +K G LI Y+KH + ++R LFD + + F
Sbjct: 157 LNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQVKTSF-------- 208
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
T+ +++ GY + +G +LKLF +M+ H+ D+
Sbjct: 209 -----------------------TWTTIIAGY-SKQGRSQVSLKLFDQMKEG--HVCPDK 242
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
+ ++S L+ C+ L + G+Q+H +++++ V+ ID Y KC + ++F+
Sbjct: 243 YVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFD- 301
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
++ KN VSW T+I+G +QN + L
Sbjct: 302 -----RMVDKNV---------------------------VSWTTVIAGCMQNSFHRDALD 329
Query: 246 LFVRMGENGVRWNEHTFA--SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
LFV M G WN F S L++C L ++ +++H++ +K + ++ FV +G++D+
Sbjct: 330 LFVEMARMG--WNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDM 387
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y KC+++ +AR+ F+ + ++V + A+
Sbjct: 388 YAKCDSLT-------------------------------DARKVFNLMAAIDLVSYNAMI 416
Query: 364 SGYVKAQN-CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
GY + CEAL DL E T LI V LLG A L +IH I++ G
Sbjct: 417 EGYSRQDKLCEAL-DLFREMRLSLSSPT-LLIFVSLLGVSASLYHLELSNQIHGLIIKYG 474
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
V +D+ S L+D+YSKC + A ++F+ ++D+V++ M + Y E+++ L++
Sbjct: 475 VSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYK 534
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC--MIDLYG 540
+ +KP+ TF A+++A + S+ G+++ N + K+ + D + ++D+Y
Sbjct: 535 CLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVI---KMGFDDDPFVANTLVDMYA 591
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQ 600
++ +E+A + S +D S + + AE A + E ++ +EG K YV
Sbjct: 592 KSGSIEEAHKAFIST-NWKDTACWNSMIATYAQHGEAEKALQVFEDMI-MEG-LKPNYVT 648
Query: 601 LANVYAA 607
V +A
Sbjct: 649 FVGVLSA 655
>gi|413934265|gb|AFW68816.1| hypothetical protein ZEAMMB73_462632 [Zea mays]
Length = 648
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 170/470 (36%), Positives = 268/470 (57%), Gaps = 4/470 (0%)
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG--VRWNEHTF 262
G M A + F P + D VSWNTLI GYV++G E L+LF R+ E+G VR +E T
Sbjct: 169 RGPMAFARRLFDESP-VRDVVSWNTLIGGYVRSGLPREALELFWRLAEDGNAVRPDEVTV 227
Query: 263 ASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGV 322
A+S C + +++ K +H +V G+ + + ++D+Y KC ++ A S+
Sbjct: 228 IGAVSGCAQMGDLELGKRLHEFVDNKGVRCTVRLMNAVMDMYVKCGSLELANSVFERISN 287
Query: 323 RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF 382
R + S ++MIVG++ G ME+AR FD + E++V W AL +GYV+ + + L E
Sbjct: 288 RTAVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHE- 346
Query: 383 VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGN 442
+ K V + + +V LL AC+ AL G +H YI R + + L ++LVDMY+KCGN
Sbjct: 347 MQKSKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHKLHLSVALGTSLVDMYAKCGN 406
Query: 443 MTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
+ A +F ++ + + MI A+HGH ++AI F+ M++ G++PD +TF+ +LSA
Sbjct: 407 IKKAICVFNEIPVQNALTWTSMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSA 466
Query: 503 FRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAV 562
H G VE G ++F+ M A Y + + HY+CMIDL GRA L++A + + ++P + DAV
Sbjct: 467 CCHAGLVEAGRQFFSLMHAKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNAMPMDPDAV 526
Query: 563 ILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMR 622
+ G+ CR++ N L +A KL+ L+ ++ YV LAN+YA + ++R MR
Sbjct: 527 VWGALFFACRMHGNITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMRKKADKVRVMMR 586
Query: 623 GMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
+ + GCS + + +H F V D SH TNAIY L T ++ IA
Sbjct: 587 HLGVEKVPGCSCIELNGVVHEFIVKDKSHLDTNAIYDCLHEITLQMRHIA 636
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 138/541 (25%), Positives = 233/541 (43%), Gaps = 105/541 (19%)
Query: 9 ALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIK 68
A++ HVQ K G + N +H +S + +R+LFDE P R+V SWNT+I ++
Sbjct: 142 AVLGHVQ--KLGFSADVFVVNAAMHFWSVRGPMAFARRLFDESPVRDVVSWNTLIGGYVR 199
Query: 69 SHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
S G +AL+LF + +R DE TV
Sbjct: 200 S--------------------------------GLPREALELFWRLAEDGNAVRPDEVTV 227
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE 188
++ C ++ ++ G++LH F+ + +++++DMY KC E A VFE +
Sbjct: 228 IGAVSGCAQMGDLELGKRLHEFVDNKGVRCTVRLMNAVMDMYVKCGSLELANSVFERISN 287
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
+S M+ R G ME A F PE D WN L++GYVQN +E + LF
Sbjct: 288 RTA-VSWTTMIVGHARLGMMEDARMLFDEMPE-RDVFPWNALMAGYVQNKQGKEAIALFH 345
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
M ++ V NE T + LSAC L ++ +H ++ ++ L + + + +VD+Y KC
Sbjct: 346 EMQKSKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHKLHLSVALGTSLVDMYAKCG 405
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
N+ A + V+N+ + +SMI G + G+ +EA +F
Sbjct: 406 NIKKAICVFNEIPVQNALTWTSMICGLANHGHADEAIEYF-------------------- 445
Query: 369 AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK 428
+ + DL G+ D + + +L AC HA ++ G Q
Sbjct: 446 ----QRMIDL--------GLQPDEITFIGVLSACC-----------HAGLVEAGRQF--- 479
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
++ + + +ER + Y+ MI GH ++A L M
Sbjct: 480 ----------------FSLMHAKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNAM---P 520
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISP-ETDHYACMIDLYGRANQLEK 547
+ PDAV + A+ A R G++ +GEK + ++ P ++ Y + ++Y AN +K
Sbjct: 521 MDPDAVVWGALFFACRMHGNITLGEKAAMKLV---ELDPSDSGIYVLLANMYAEANMRKK 577
Query: 548 A 548
A
Sbjct: 578 A 578
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 125/269 (46%), Gaps = 37/269 (13%)
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA---QNCEALFDLLS 380
+ F +++ + +S++G M ARR FD ++VV W L GYV++ + LF L+
Sbjct: 155 DVFVVNAAMHFWSVRGPMAFARRLFDESPVRDVVSWNTLIGGYVRSGLPREALELFWRLA 214
Query: 381 EFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC 440
E V D + ++ + CA L GK +H ++ GV+ +L++ ++DMY KC
Sbjct: 215 E--DGNAVRPDEVTVIGAVSGCAQMGDLELGKRLHEFVDNKGVRCTVRLMNAVMDMYVKC 272
Query: 441 GN-------------------------------MTYAEIIFQNFIERDLVLYNVMIACYA 469
G+ M A ++F ERD+ +N ++A Y
Sbjct: 273 GSLELANSVFERISNRTAVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYV 332
Query: 470 HHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPET 529
+ ++AI LF EM + + P+ +T V +LSA G++EMG + + +K+
Sbjct: 333 QNKQGKEAIALFHEMQKSKVDPNEITMVNLLSACSQLGALEMG-MWVHHYIDRHKLHLSV 391
Query: 530 DHYACMIDLYGRANQLEKAIEFMKSIPTE 558
++D+Y + ++KAI IP +
Sbjct: 392 ALGTSLVDMYAKCGNIKKAICVFNEIPVQ 420
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 90/199 (45%), Gaps = 6/199 (3%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
+++ K ++K+A +F+ P ++ +T+ SM+CG N G+ +A++ F M D
Sbjct: 395 TSLVDMYAKCGNIKKAICVFNEIPVQNALTWTSMICGLAN-HGHADEAIEYFQRM--IDL 451
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFM-VKTSNDASGFAVSSLIDMYSKCRCYEE 178
++ DE T L+ C V GRQ + M K + S +ID+ + +E
Sbjct: 452 GLQPDEITFIGVLSACCHAGLVEAGRQFFSLMHAKYHLERKMKHYSCMIDLLGRAGHLDE 511
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN--DAVSWNTLISGYVQ 236
A ++ + + + A+ AC G + + K + EL+ D+ + L + Y +
Sbjct: 512 AEQLVNAMPMDPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPSDSGIYVLLANMYAE 571
Query: 237 NGDAEEGLKLFVRMGENGV 255
++ K+ V M GV
Sbjct: 572 ANMRKKADKVRVMMRHLGV 590
>gi|356518834|ref|XP_003528082.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08490-like [Glycine max]
Length = 875
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 195/616 (31%), Positives = 311/616 (50%), Gaps = 42/616 (6%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N +IS +K +++A +LF + +DLVT+N+ + GY + G AL LF + S E
Sbjct: 291 NALISLYLKVGQMREAEALFWTMDARDLVTWNAFIAGY-TSNGEWLKALHLFGNLASL-E 348
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV-SSLIDMYSKCRCYEE 178
+ D T+ S L C +L N+ G+Q+HA++ + AV ++L+ Y+KC EE
Sbjct: 349 TLLPDSVTMVSILPACAQLKNLKVGKQIHAYIFRHPFLFYDTAVGNALVSFYAKCGYTEE 408
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
A F ++IS + D +SWN++ + +
Sbjct: 409 AYHTF-------SMIS--------------------------MKDLISWNSIFDAFGEKR 435
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG-LISN--PF 295
L L M + +R + T + + C L V+ KEIHS+ ++ G L+SN P
Sbjct: 436 HHSRFLSLLHCMLKLRIRPDSVTILAIIRLCASLLRVEKVKEIHSYSIRTGSLLSNTAPT 495
Query: 296 VSSGIVDVYCKCENMNYAESMLL-LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
V + I+D Y KC NM YA M L RN + +S+I GY G+ +A F ++E
Sbjct: 496 VGNAILDAYSKCGNMEYANKMFQNLSEKRNLVTCNSLISGYVGLGSHHDANMIFSGMSET 555
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
++ W + Y + E L E + G+ D + ++ LL C A++H +
Sbjct: 556 DLTTWNLMVRVYAENDCPEQALGLCHELQAR-GMKPDTVTIMSLLPVCTQMASVHLLSQC 614
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
YI+R + D L + L+D Y+KCG + A IFQ E+DLV++ MI YA HG
Sbjct: 615 QGYIIRSCFK-DLHLEAALLDAYAKCGIIGRAYKIFQLSAEKDLVMFTAMIGGYAMHGMS 673
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC 534
E+A+ +F ML+ GI+PD + F +ILSA H G V+ G K F S+ + + P + YAC
Sbjct: 674 EEALWIFSHMLKLGIQPDHIIFTSILSACSHAGRVDEGLKIFYSIEKLHGMKPTVEQYAC 733
Query: 535 MIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNN 594
++DL R ++ +A + S+P E +A + G+ L C+ + EL +L ++E N+
Sbjct: 734 VVDLLARGGRISEAYSLVTSLPIEANANLWGTLLGACKTHHEVELGRIVANQLFKIEAND 793
Query: 595 KARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKT 654
Y+ L+N+YAA+ W + +R+ MR + AGCSW+ VE +IF GD SHP+
Sbjct: 794 IGNYIVLSNLYAADARWDGVMEVRRMMRNKDLKKPAGCSWIEVERTNNIFVAGDCSHPQR 853
Query: 655 NAIYSVLAIFTGELYE 670
+ IYS L ++ E
Sbjct: 854 SIIYSTLQTLDRQVKE 869
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 133/567 (23%), Positives = 234/567 (41%), Gaps = 108/567 (19%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K G +T L+++Y+K +L E KLFD++
Sbjct: 66 HGYVVKQGHGSCHVTNKGLLNMYAKCGMLVECLKLFDQLS-------------------- 105
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
H D V +N +L G+ + +AD +++F M S+ E + + TV + L
Sbjct: 106 -----------HCDPVVWNIVLSGFSGSNKCDADVMRVFRMMHSSREALP-NSVTVATVL 153
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+C +L ++ G+ +H +++K+ D ++L+ MY+KC L
Sbjct: 154 PVCARLGDLDAGKCVHGYVIKSGFDQDTLGGNALVSMYAKC-----------------GL 196
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+S +A + D VSWN +I+G +N E+ LF M +
Sbjct: 197 VSHDAYAV---------------FDNIAYKDVVSWNAMIAGLAENRLVEDAFLLFSSMVK 241
Query: 253 NGVRWNEHTFASALSACCGL-RNVK--CAKEIHSWVLK-NGLISNPFVSSGIVDVYCKCE 308
R N T A+ L C ++V C ++IHS+VL+ L ++ V + ++ +Y K
Sbjct: 242 GPTRPNYATVANILPVCASFDKSVAYYCGRQIHSYVLQWPELSADVSVCNALISLYLKV- 300
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
G M EA F ++ +++V W A +GY
Sbjct: 301 ------------------------------GQMREAEALFWTMDARDLVTWNAFIAGYTS 330
Query: 369 AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM-DK 427
L + E ++ D++ +V +L ACA L GK+IHAYI R D
Sbjct: 331 NGEWLKALHLFGNLASLETLLPDSVTMVSILPACAQLKNLKVGKQIHAYIFRHPFLFYDT 390
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
+ + LV Y+KCG A F +DL+ +N + + H + + L ML+
Sbjct: 391 AVGNALVSFYAKCGYTEEAYHTFSMISMKDLISWNSIFDAFGEKRHHSRFLSLLHCMLKL 450
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA-----CMIDLYGRA 542
I+PD+VT +AI+ R C S+ EK + + + A ++D Y +
Sbjct: 451 RIRPDSVTILAII---RLCASLLRVEKVKEIHSYSIRTGSLLSNTAPTVGNAILDAYSKC 507
Query: 543 NQLEKAIEFMKSIPTEEDAVILGSFLN 569
+E A + +++ + + V S ++
Sbjct: 508 GNMEYANKMFQNLSEKRNLVTCNSLIS 534
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 113/242 (46%), Gaps = 12/242 (4%)
Query: 13 HVQAIKAGLTLTTITT---NQLIHIYSKHNLLRESRKLFDEMPE-RNVFSWNTIISACIK 68
H +I+ G L+ N ++ YSK + + K+F + E RN+ + N++IS +
Sbjct: 479 HSYSIRTGSLLSNTAPTVGNAILDAYSKCGNMEYANKMFQNLSEKRNLVTCNSLISGYVG 538
Query: 69 SHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
A +F DL T+N M+ Y + E AL L E+Q+ ++ D T+
Sbjct: 539 LGSHHDANMIFSGMSETDLTTWNLMVRVYAENDCPE-QALGLCHELQA--RGMKPDTVTI 595
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE 188
S L +C ++ +V Q +++++ ++L+D Y+KC A ++F+ +
Sbjct: 596 MSLLPVCTQMASVHLLSQCQGYIIRSCFKDLHLE-AALLDAYAKCGIIGRAYKIFQ-LSA 653
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELN---DAVSWNTLISGYVQNGDAEEGLK 245
E +L+ AM+ G E AL F +L D + + +++S G +EGLK
Sbjct: 654 EKDLVMFTAMIGGYAMHGMSEEALWIFSHMLKLGIQPDHIIFTSILSACSHAGRVDEGLK 713
Query: 246 LF 247
+F
Sbjct: 714 IF 715
>gi|242061948|ref|XP_002452263.1| hypothetical protein SORBIDRAFT_04g022670 [Sorghum bicolor]
gi|241932094|gb|EES05239.1| hypothetical protein SORBIDRAFT_04g022670 [Sorghum bicolor]
Length = 603
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 189/556 (33%), Positives = 296/556 (53%), Gaps = 24/556 (4%)
Query: 126 FTVTSTLNLCVKLLNVG----FGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
F + + L + ++ G GR +HA +VKT+ + + L+ +YS+ A
Sbjct: 33 FAIPELIPLLERAISTGDVLRLGRAVHARLVKTALTSHTLLSNRLVALYSRLPSSAAAVA 92
Query: 182 VFEGCTEEVNLISKNAMVAACCREGE-MEMALKTFWRQP-ELNDAVSWNTLISGYVQNGD 239
F+ + N S N ++AA R + AL F P + + VS+NTL+S V +G
Sbjct: 93 AFDDLPHK-NAHSYNTLLAALLRRPDTFPDALHLFDTMPADARNLVSYNTLMSSLVHHGR 151
Query: 240 AEEGLKLFVRMGEN-----GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
E L++ R+ + G+ + T S +AC G+R + +E+H V+ +G+
Sbjct: 152 QAEALRVVARLARDRFLGPGLAMDRFTVVSVATACAGIRAARPLREMHGAVVVSGMELTV 211
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
+++ +V+ Y K + A + +R++ + +SMI GY ++EA + FD + +K
Sbjct: 212 IMANAMVNAYSKAWRVEEARHLFDQISIRDNVTWTSMISGYCQVKKLDEALQVFDMMPDK 271
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
+ V WTAL SG+ + + +L E + EGV LV +LGACA + GKE+
Sbjct: 272 DRVAWTALISGHEQNGEEDTALELF-ERMLAEGVSPTTFALVSVLGACAKLGLVTRGKEL 330
Query: 415 HAYILRMGVQMDKKLI---STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
H ILR + D I + LVDMYSKCG+MT A +F ERD + +N M+ ++H+
Sbjct: 331 HCSILRRSIGSDPFNIFIHNALVDMYSKCGDMTAAMAVFHRMPERDFISWNSMVTGFSHN 390
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH 531
G ++++ +FEEML G++P VTF+A+L+A H G V G SM D+ + P +H
Sbjct: 391 GLGKQSLAIFEEMLVAGVRPTHVTFLAVLTACSHSGLVSNGRLILESME-DHGVEPRAEH 449
Query: 532 YACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSF---LNVCRLNRNAELAGEAEEKLL 588
YA ID GR QLE+AIEF+K +P+ GS+ L CRL+ N ELA E E L
Sbjct: 450 YAAFIDALGRNRQLEEAIEFIKDLPSRIGPGTAGSWGALLGACRLHGNIELAEEVAEFLF 509
Query: 589 RLEGNNKARYVQLANVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTV 646
+LE N RYV L+N+YAA G W + R+R M +G+K ++ SW+ V H+F
Sbjct: 510 KLEPGNSGRYVMLSNIYAAAGQWDDARRVRGLMKEKGLKKDQ--AYSWIEVRSLKHVFVA 567
Query: 647 GDVSHPKTNAIYSVLA 662
D+SH + + IY +L
Sbjct: 568 DDMSHCEADEIYEMLG 583
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 180/336 (53%), Gaps = 12/336 (3%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHD- 71
H + +K LT T+ +N+L+ +YS+ + FD++P +N S+NT+++A ++ D
Sbjct: 59 HARLVKTALTSHTLLSNRLVALYSRLPSSAAAVAAFDDLPHKNAHSYNTLLAALLRRPDT 118
Query: 72 LKQARSLFDSSP--HKDLVTYNSMLCGYINAEGYEADALKLFIEM---QSADEHIRMDEF 126
A LFD+ P ++LV+YN+++ ++ G +A+AL++ + + + MD F
Sbjct: 119 FPDALHLFDTMPADARNLVSYNTLMSSLVH-HGRQAEALRVVARLARDRFLGPGLAMDRF 177
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
TV S C + R++H +V + + + +++++ YSK EEA +F+
Sbjct: 178 TVVSVATACAGIRAARPLREMHGAVVVSGMELTVIMANAMVNAYSKAWRVEEARHLFDQI 237
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
+ N ++ +M++ C+ +++ AL+ F P+ D V+W LISG+ QNG+ + L+L
Sbjct: 238 SIRDN-VTWTSMISGYCQVKKLDEALQVFDMMPD-KDRVAWTALISGHEQNGEEDTALEL 295
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP---FVSSGIVDV 303
F RM GV S L AC L V KE+H +L+ + S+P F+ + +VD+
Sbjct: 296 FERMLAEGVSPTTFALVSVLGACAKLGLVTRGKELHCSILRRSIGSDPFNIFIHNALVDM 355
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQG 339
Y KC +M A ++ R+ S +SM+ G+S G
Sbjct: 356 YSKCGDMTAAMAVFHRMPERDFISWNSMVTGFSHNG 391
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 134/280 (47%), Gaps = 50/280 (17%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + +G+ LT I N +++ YSK + E+R LFD++ R+ +W ++IS + L
Sbjct: 199 HGAVVVSGMELTVIMANAMVNAYSKAWRVEEARHLFDQISIRDNVTWTSMISGYCQVKKL 258
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+A +FD P KD V + +++ G+ G E AL+LF M + E + F + S L
Sbjct: 259 DEALQVFDMMPDKDRVAWTALISGH-EQNGEEDTALELFERMLA--EGVSPTTFALVSVL 315
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAV---SSLIDMYSKCRCYEEACRVFEGCTEE 189
C KL V G++LH +++ S + F + ++L+DMYSKC
Sbjct: 316 GACAKLGLVTRGKELHCSILRRSIGSDPFNIFIHNALVDMYSKC---------------- 359
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
G+M A+ F R PE D +SWN++++G+ NG ++ L +F
Sbjct: 360 ----------------GDMTAAMAVFHRMPE-RDFISWNSMVTGFSHNGLGKQSLAIFEE 402
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG 289
M GVR TF + L+AC HS ++ NG
Sbjct: 403 MLVAGVRPTHVTFLAVLTACS-----------HSGLVSNG 431
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 175/572 (30%), Positives = 300/572 (52%), Gaps = 39/572 (6%)
Query: 135 CVKLLNVGFGRQLHAFMVK-TSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLI 193
CV+ + ++L + M F + L+ +Y+K +A +F+ + ++
Sbjct: 32 CVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKMLKR-DIF 90
Query: 194 SKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGEN 253
S NA+++A + G ++ TF R P D+VS+NT I+G+ N +E L+LF RM
Sbjct: 91 SWNALLSAYAKSGSIQNLKATFDRMP-FRDSVSYNTTIAGFSGNSCPQESLELFKRMQRE 149
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA 313
G E+T S L+A L +++ K+IH ++ + N F+ + + D+Y KC + A
Sbjct: 150 GFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQA 209
Query: 314 ESM-------------LLLKG----------------------VRNSFSISSMIVGYSLQ 338
+ L++ G + + ++S++I Y
Sbjct: 210 RWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQC 269
Query: 339 GNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVIL 398
G ++EARR F EK++V WTA+ GY K E L +E + E + D+ L +
Sbjct: 270 GRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLL-EHIEPDSYTLSSV 328
Query: 399 LGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDL 458
+ +CA A+LH G+ +H + G+ + + S L+DMYSKCG + A +F R++
Sbjct: 329 VSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNV 388
Query: 459 VLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNS 518
V +N MI A +GH++ A+ LFE ML++ KPD VTF+ ILSA HC +E G++YF+S
Sbjct: 389 VSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDS 448
Query: 519 MTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAE 578
+T + ++P DHYACM++L GR ++E+A+ +K++ + D +I + L++C +
Sbjct: 449 ITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIV 508
Query: 579 LAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVE 638
A A L L+ Y+ L+N+YA+ G W ++ +R M+ +FAG SW+ ++
Sbjct: 509 NAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEID 568
Query: 639 HEIHIFTVGDVSHPKTNAIYSVLAIFTGELYE 670
+E+H FT D +HP++ IY L + G+L E
Sbjct: 569 NEVHRFTSEDRTHPESEDIYEKLNMLIGKLQE 600
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 139/508 (27%), Positives = 245/508 (48%), Gaps = 58/508 (11%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLV 88
NQL+H+Y+K LR+++ LFD+M +R++FSWN ++SA KS ++ ++ FD P +D V
Sbjct: 62 NQLLHLYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSV 121
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLH 148
+YN+ + G+ + ++L+LF MQ E E+T+ S LN +L ++ +G+Q+H
Sbjct: 122 SYNTTIAGF-SGNSCPQESLELFKRMQR--EGFEPTEYTIVSILNASAQLSDLRYGKQIH 178
Query: 149 AFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAM---------- 198
++ + + F ++L DMY+KC E+A +F+ C + NL+S N M
Sbjct: 179 GSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFD-CLTKKNLVSWNLMISGYAKNGQP 237
Query: 199 -------------------------VAACCREGEMEMALKTFWRQPELNDAVSWNTLISG 233
+AA C+ G ++ A + F E D V W ++ G
Sbjct: 238 EKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKE-KDIVCWTAMMVG 296
Query: 234 YVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISN 293
Y +NG E+ L LF M + + +T +S +S+C L ++ + +H + GL +N
Sbjct: 297 YAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNN 356
Query: 294 PFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
VSS ++D+Y KC ++ A S+ L RN S ++MIVG + G+ ++A F+++ +
Sbjct: 357 LLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQ 416
Query: 354 KNVVVWTALFSGYVKA-------QNCEALFDLLSEFVTKEGVVTDALILVILLGACA-LQ 405
+ F G + A + + FD ++ + +V LLG ++
Sbjct: 417 QKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIE 476
Query: 406 AALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD---LVLYN 462
A+ A I M D + STL+ + S G++ AE+ ++ E D V Y
Sbjct: 477 QAV-------ALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYI 529
Query: 463 VMIACYAHHGHEEKAILLFEEMLEKGIK 490
++ YA G + + M K +K
Sbjct: 530 MLSNMYASMGRWKDVASVRNLMKSKNVK 557
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 38/232 (16%)
Query: 19 AGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSL 78
+G +T + +I Y + + E+R++F E E
Sbjct: 250 SGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKE------------------------- 284
Query: 79 FDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKL 138
KD+V + +M+ GY G E DAL LF EM EHI D +T++S ++ C KL
Sbjct: 285 ------KDIVCWTAMMVGYAK-NGREEDALLLFNEMLL--EHIEPDSYTLSSVVSSCAKL 335
Query: 139 LNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAM 198
++ G+ +H + + + S+LIDMYSKC ++A VF N++S NAM
Sbjct: 336 ASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVF-NLMPTRNVVSWNAM 394
Query: 199 VAACCREGEMEMALKTF---WRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
+ C + G + AL+ F +Q D V++ ++S + E+G + F
Sbjct: 395 IVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYF 446
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H ++I AGL + ++ LI +YSK + ++R +F+ MP RNV SWN +I C ++
Sbjct: 345 HGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHD 404
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINA 100
K A LF++ + N G ++A
Sbjct: 405 KDALELFENMLQQKFKPDNVTFIGILSA 432
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 184/601 (30%), Positives = 296/601 (49%), Gaps = 67/601 (11%)
Query: 57 FSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQS 116
F +I A D+ AR +FD P + +N+++ GY ++ DAL ++ MQ
Sbjct: 54 FLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQ-DALLMYSNMQL 112
Query: 117 ADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCY 176
A + D FT L C L ++ GR +HA + + DA F + LI +Y+KCR
Sbjct: 113 A--RVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRL 170
Query: 177 EEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQ 236
A VFEG + + +T VSW ++S Y Q
Sbjct: 171 GSARTVFEG----------------------LPLPERTI---------VSWTAIVSAYAQ 199
Query: 237 NGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFV 296
NG+ E L++F +M + V+ + S L+A L+++K + IH+ V+K GL P +
Sbjct: 200 NGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDL 259
Query: 297 SSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNV 356
+ +Y KC G + A+ FD + N+
Sbjct: 260 LISLNTMYAKC-------------------------------GQVATAKILFDKMKSPNL 288
Query: 357 VVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHA 416
++W A+ SGY K D+ E + K+ V D + + + ACA +L + ++
Sbjct: 289 ILWNAMISGYAKNGYAREAIDMFHEMINKD-VRPDTISITSAISACAQVGSLEQARSMYE 347
Query: 417 YILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
Y+ R + D + S L+DM++KCG++ A ++F ++RD+V+++ MI Y HG +
Sbjct: 348 YVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRARE 407
Query: 477 AILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMI 536
AI L+ M G+ P+ VTF+ +L A H G V G +FN M AD+KI+P+ HYAC+I
Sbjct: 408 AISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHKINPQQQHYACVI 466
Query: 537 DLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKA 596
DL GRA L++A E +K +P + + G+ L+ C+ +R+ EL A ++L ++ +N
Sbjct: 467 DLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTG 526
Query: 597 RYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNA 656
YVQL+N+YAA W + +R +M+ N+ GCSWV V + F VGD SHP+
Sbjct: 527 HYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEE 586
Query: 657 I 657
I
Sbjct: 587 I 587
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 128/264 (48%), Gaps = 6/264 (2%)
Query: 288 NGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNS-FSISSMIVGYSLQGNMEEARR 346
+G+ S+ F +S ++D + + LL+ G++ S F I+ +I S G++ AR+
Sbjct: 16 SGIHSDSFYAS-LIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQ 74
Query: 347 HFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQA 406
FD L + W A+ GY + + + + S V D+ LL AC+ +
Sbjct: 75 VFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLAR-VSPDSFTFPHLLKACSGLS 133
Query: 407 ALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQN--FIERDLVLYNVM 464
L G+ +HA + R+G D + + L+ +Y+KC + A +F+ ER +V + +
Sbjct: 134 HLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAI 193
Query: 465 IACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYK 524
++ YA +G +A+ +F +M + +KPD V V++L+AF ++ G + ++
Sbjct: 194 VSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQG-RSIHASVVKMG 252
Query: 525 ISPETDHYACMIDLYGRANQLEKA 548
+ E D + +Y + Q+ A
Sbjct: 253 LEIEPDLLISLNTMYAKCGQVATA 276
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 128/337 (37%), Gaps = 108/337 (32%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFD--EMPERNVFSWNTI 62
+L+ H Q + G N LI +Y+K L +R +F+ +PER + SW I
Sbjct: 134 HLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAI 193
Query: 63 ISACIKS-----------------------------------HDLKQARS---------- 77
+SA ++ DLKQ RS
Sbjct: 194 VSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGL 253
Query: 78 -------------------------LFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
LFD +L+ +N+M+ GY GY +A+ +F
Sbjct: 254 EIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAK-NGYAREAIDMFH 312
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
EM + D +R D ++TS ++ C ++ ++ R ++ ++ ++ F S+LIDM++K
Sbjct: 313 EMINKD--VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAK 370
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C E A VF+ +T R D V W+ +I
Sbjct: 371 CGSVEGARLVFD----------------------------RTLDR-----DVVVWSAMIV 397
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
GY +G A E + L+ M GV N+ TF L AC
Sbjct: 398 GYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMAC 434
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 90/184 (48%), Gaps = 13/184 (7%)
Query: 384 TKEGVVTDALILVILLGACALQAALHPG--KEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
T G+ +D+ A + +A H K+IHA +L +G+Q LI+ L+ S G
Sbjct: 14 TNSGIHSDSFY------ASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFG 67
Query: 442 NMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
++T+A +F + + +N +I Y+ + H + A+L++ M + PD+ TF +L
Sbjct: 68 DITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLK 127
Query: 502 AFRHCGSVEMGEKYFNSMTADYKISPETDHYA--CMIDLYGRANQLEKAIEFMKSIPTEE 559
A ++MG ++ ++ +++ + D + +I LY + +L A + +P E
Sbjct: 128 ACSGLSHLQMG-RFVHAQV--FRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPE 184
Query: 560 DAVI 563
++
Sbjct: 185 RTIV 188
>gi|356522600|ref|XP_003529934.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
mitochondrial-like [Glycine max]
Length = 644
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 198/668 (29%), Positives = 311/668 (46%), Gaps = 92/668 (13%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L E H IK G NQ++ +Y K ++ KLF+E+ RNV SWN +I
Sbjct: 66 LPEGKQLHAHLIKFGFCHVLSLQNQILGVYLKCTEADDAEKLFEELSVRNVVSWNILIRG 125
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
+ D + DS+ + + ML L+L + D
Sbjct: 126 IVGCGDANEN----DSNQQQCFSYFKRML-------------LELVVP----------DS 158
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
T +CVK ++ G QLH F VK D F S L+D+Y++C E A RVF
Sbjct: 159 TTFNGLFGVCVKFHDIDMGFQLHCFAVKLGLDLDCFVGSVLVDLYAQCGLVENARRVF-- 216
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
L+ ++ D V WN +IS Y N EE
Sbjct: 217 ------LVVQH-------------------------RDLVVWNVMISCYALNCLPEEAFV 245
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
+F M +G +E TF++ LS C L K++H +L+ S+ V+S ++++Y
Sbjct: 246 MFNLMRWDGANGDEFTFSNLLSICDSLEYYDFGKQVHGHILRLSFDSDVLVASALINMYA 305
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
K EN+ +A R FD++ +NVV W + G
Sbjct: 306 KNENI-------------------------------VDAHRLFDNMVIRNVVAWNTIIVG 334
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
Y + + LL E + +EG D L + + C +A+ + HA+ ++ Q
Sbjct: 335 YGNRREGNEVMKLLREML-REGFSPDELTISSTISLCGYVSAITETMQAHAFAVKSSFQE 393
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
+ ++L+ YSKCG++T A F+ E DLV + +I YA HG ++A +FE+ML
Sbjct: 394 FLSVANSLISAYSKCGSITSACKCFRLTREPDLVSWTSLINAYAFHGLAKEATEVFEKML 453
Query: 486 EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQL 545
GI PD ++F+ +LSA HCG V G YFN MT+ YKI P++ HY C++DL GR +
Sbjct: 454 SCGIIPDQISFLGVLSACSHCGLVTKGLHYFNLMTSVYKIVPDSGHYTCLVDLLGRYGLI 513
Query: 546 EKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVY 605
+A EF++S+P E ++ LG+F+ C L+ N LA A EKL +E Y ++N+Y
Sbjct: 514 NEAFEFLRSMPMEAESNTLGAFVASCNLHANIGLAKWAAEKLFTIEPEKNVNYAVMSNIY 573
Query: 606 AAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFT 665
A+ +W+++ R+R+ M R GCSW+ + +++H F D HPK +++ L +
Sbjct: 574 ASHRHWSDVERVRRMMGNKCDARVPGCSWIEITNQVHSFVSNDKIHPKALEMHATLKMLL 633
Query: 666 GELYEIAG 673
+ E +G
Sbjct: 634 WPMKEKSG 641
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 75/159 (47%), Gaps = 12/159 (7%)
Query: 399 LGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDL 458
L A +A L GK++HA++++ G L + ++ +Y KC AE +F+ R++
Sbjct: 57 LKVSAKRALLPEGKQLHAHLIKFGFCHVLSLQNQILGVYLKCTEADDAEKLFEELSVRNV 116
Query: 459 VLYNVMIACYAHHG-------HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEM 511
V +N++I G ++++ F+ ML + + PD+ TF + ++M
Sbjct: 117 VSWNILIRGIVGCGDANENDSNQQQCFSYFKRMLLELVVPDSTTFNGLFGVCVKFHDIDM 176
Query: 512 GEKYFNSMTADYKISPETDHY--ACMIDLYGRANQLEKA 548
G F K+ + D + + ++DLY + +E A
Sbjct: 177 G---FQLHCFAVKLGLDLDCFVGSVLVDLYAQCGLVENA 212
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 188/658 (28%), Positives = 341/658 (51%), Gaps = 55/658 (8%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + +K+G + +LI YS +N ++ + +P+ V+S++++I A K+
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAKLF 97
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
Q+ +F ++F D H+ + F V
Sbjct: 98 SQSIGVFS----------------------------RMFSHGLIPDTHVLPNLFKV---- 125
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C +L G+Q+H + D F SL MY +C +A +VF+ +E+ ++
Sbjct: 126 --CAELSAFKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFDRMSEK-DV 182
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELN---DAVSWNTLISGYVQNGDAEEGLKLFVR 249
++ +A++ R+G +E ++ + + VSWN ++SG+ ++G +E + +F +
Sbjct: 183 VTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQK 242
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
M G ++ T +S L + N+ ++IH +V+K GL+ + V S ++D+Y K +
Sbjct: 243 MHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGH 302
Query: 310 MN-----YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK----NVVVWT 360
+ + E ++ GV N++ I G S G +++A F E+ NVV WT
Sbjct: 303 VYGIIKLFDEFEMMETGVCNAY-----ITGLSRNGLVDKALEMFGLFKEQKMELNVVSWT 357
Query: 361 ALFSGYVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
++ +G + ++ EAL +L E GV + + + +L AC AAL G+ H + +
Sbjct: 358 SIIAGCAQNGKDIEAL-ELFREMQVA-GVKPNRVTIPSMLPACGNIAALGHGRSTHGFAV 415
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
R+ + D + S L+DMY+KCG + ++I+F ++LV +N ++ Y+ HG ++ +
Sbjct: 416 RVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMS 475
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
+FE ++ +KPD ++F ++LSA G + G KYFN M+ +Y I P +HY+CM++L
Sbjct: 476 IFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLL 535
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYV 599
GRA +L++A + +K IP E D+ + G+ LN CRL N +LA A +KL LE N YV
Sbjct: 536 GRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQNNVDLAEIAAQKLFHLEPENPGTYV 595
Query: 600 QLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
++N+YAA+G W E+ IR +M + + GCSW+ V+++++ D SHP+ + I
Sbjct: 596 LMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNKVYTLLACDKSHPQIDQI 653
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 190/659 (28%), Positives = 328/659 (49%), Gaps = 103/659 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H Q++K G T N LI++YSK L+ E
Sbjct: 224 HAQSVKFGCRSTVFVCNSLINMYSKCGLVEE----------------------------- 254
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
A+++F +D+V++N+++ G + E ++ +AL+LF + +++ ++ + T ++ +
Sbjct: 255 --AKAVFRQMETRDMVSWNTLMAGLLLNE-HQLEALQLFHDSRAS--MAKLSQSTYSTVI 309
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
LC L + RQLH+ ++K + G +++++D YSKC
Sbjct: 310 KLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKC------------------- 350
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
GE++ A F P + VSW +I G +QN D LF RM E
Sbjct: 351 -------------GELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMRE 397
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+ V+ NE T+++ L+A + +IH+ ++K P V +
Sbjct: 398 DNVKPNEFTYSTVLTASIPI----LLPQIHAQIIKTNYQHAPSVGT-------------- 439
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
+++ YS GN EEA F + K+VV W+A+ S Y +A +C
Sbjct: 440 -----------------ALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDC 482
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACA-LQAALHPGKEIHAYILRMGVQMDKKLIS 431
+ ++ + ++ +G+ + + + ACA A + G++ HA ++ Q + S
Sbjct: 483 DGATNVFIK-MSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGS 541
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
LV MY++ G++ A I+F+ +RDLV +N MI+ YA HG+ ++A+ F +M GI+
Sbjct: 542 ALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEM 601
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
D TF+A++ H G V+ G++YF+SM D+ ISP +HY+CM+DLY RA +L++ +
Sbjct: 602 DGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNL 661
Query: 552 MKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNW 611
++ +P A++ + L CR+++N EL A +KLL LE ++ A YV L+N+YAA G W
Sbjct: 662 IEGMPFPAGAMVWRTLLGACRVHKNVELGKLAAQKLLLLEPDDSATYVLLSNIYAAAGRW 721
Query: 612 AEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYE 670
E +RK M K + AGCSW+ +++++H F D SHP + IY+ L T L +
Sbjct: 722 KERDEVRKLMDSKKVKKEAGCSWIQIKNKVHSFIACDKSHPLSEQIYAKLKAMTTRLKQ 780
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 204/511 (39%), Gaps = 82/511 (16%)
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNS----MLCGYINAEGYEADALKLFIEMQSADEHI 121
C + + AR D P +D +S + Y +AL F+++
Sbjct: 39 CADTCNAPGARQALDGMPSRDAAAGSSSNPVAIVDYGRRGKGRGEALDHFVDVHRCG--- 95
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV-SSLIDMYSKCRCYEEAC 180
R+ V+ L +C + + G QLH VK D + V ++L+DMY KC E+
Sbjct: 96 RVQGAAVSRVLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGR 155
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
VFEG P+ N V+W +L++GYVQ
Sbjct: 156 VVFEG--------------------------------MPKRN-VVTWTSLLTGYVQGRAC 182
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
+ + LF RM GV N TF S LSA V + +H+ +K G S FV + +
Sbjct: 183 SDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSL 242
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
+++Y KC G +EEA+ F + +++V W
Sbjct: 243 INMYSKC-------------------------------GLVEEAKAVFRQMETRDMVSWN 271
Query: 361 ALFSG-YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
L +G + EAL + + VI L A Q AL +++H+ +L
Sbjct: 272 TLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLAL--ARQLHSCVL 329
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFI-ERDLVLYNVMIACYAHHGHEEKAI 478
+ G D +++ ++D YSKCG + A IF +++V + MI + A
Sbjct: 330 KHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAA 389
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
LF M E +KP+ T+ +L+A + + + + + +Y+ +P ++
Sbjct: 390 ALFSRMREDNVKPNEFTYSTVLTASI---PILLPQIHAQIIKTNYQHAPSVG--TALLAS 444
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLN 569
Y + E+A+ K I +D V + L+
Sbjct: 445 YSKLGNTEEALSIFKMI-DHKDVVAWSAMLS 474
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 121/244 (49%), Gaps = 6/244 (2%)
Query: 339 GNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF--VTKEGVVTDALILV 396
G +E+ R F+ + ++NVV WT+L +GYV+ + C D+++ F + EGV +
Sbjct: 149 GGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACS---DVMALFFRMRAEGVWPNPFTFT 205
Query: 397 ILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER 456
+L A A Q A+ G+ +HA ++ G + + ++L++MYSKCG + A+ +F+ R
Sbjct: 206 SVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETR 265
Query: 457 DLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYF 516
D+V +N ++A + H+ +A+ LF + K T+ ++ + + + +
Sbjct: 266 DMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQ-L 324
Query: 517 NSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRN 576
+S + + + ++D Y + +L+ A +P ++ V + + C N +
Sbjct: 325 HSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNAD 384
Query: 577 AELA 580
LA
Sbjct: 385 IPLA 388
>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 185/614 (30%), Positives = 317/614 (51%), Gaps = 38/614 (6%)
Query: 57 FSWNTIISACIKS--HDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
F+ + +I+ C S DL ++ ++ + + ++N + G++++E +A+ L+ +
Sbjct: 39 FASSRLIAFCAISEWRDLDYCTNILFNTRNPNTFSWNVAIRGFLDSEN-PREAVVLYKRV 97
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
D + D +T C +L + G ++ ++ D+ F +++I + C
Sbjct: 98 LQCD-GTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCG 156
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
+ A ++F+ +C R D VSWN++I+GY
Sbjct: 157 DLDGARKMFD---------------KSCVR------------------DLVSWNSMINGY 183
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
V+ G A E L + M G++ +E T +S+C L ++ +E H ++ +NGL
Sbjct: 184 VRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTV 243
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
+++ ++D+Y KC N+ A + + S ++M+VGY+ G ++ A + FD + +K
Sbjct: 244 PLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDK 303
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
+VV W A+ GYV A + L +E + + D + +V L AC+ AL G I
Sbjct: 304 DVVPWNAMIGGYVHANRGKEALALFNE-MQAMNINPDEVTMVSCLSACSQLGALDVGIWI 362
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
H YI + + ++ L + L+DMY+KCG +T A +FQ R+ + + +I+ A HG+
Sbjct: 363 HHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNA 422
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC 534
AI F EM++ + PD VTF+ +LSA H G VE G KYF+ M++ + +SP+ HY+C
Sbjct: 423 HGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSC 482
Query: 535 MIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNN 594
M+DL GRA LE+A E +KS+P E DAV+ G+ CR++ N + A KLL+++ ++
Sbjct: 483 MVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHD 542
Query: 595 KARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKT 654
YV LAN+Y W E G+ RK MR + GCS + V ++ F V D SHP++
Sbjct: 543 SGIYVLLANMYGEAEMWKEAGKARKLMRQRGVEKTPGCSSIEVNGIVYEFIVRDKSHPQS 602
Query: 655 NAIYSVLAIFTGEL 668
IY L T +L
Sbjct: 603 EQIYECLIQLTRQL 616
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 147/602 (24%), Positives = 262/602 (43%), Gaps = 73/602 (12%)
Query: 1 MRSLNLKEALICHVQAIKA-GLTLTTITTNQLIHIYSKHNLLRESRKLFDEMP----ERN 55
+ S N +EA++ + + ++ G T L ++ +L+R ++ + + +
Sbjct: 82 LDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSD 141
Query: 56 VFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQ 115
+F N +I + DL AR +FD S +DLV++NSM+ GY+ G+ +AL + EM+
Sbjct: 142 IFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVR-RGWAYEALNFYREMK 200
Query: 116 SADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRC 175
E I+ DE T+ ++ C +L ++ GR+ H ++ + + ++L+DMY KC
Sbjct: 201 V--EGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGN 258
Query: 176 YEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYV 235
E A ++F+ T + ++S MV + G ++MA K F P+ D V WN +I GYV
Sbjct: 259 LESARKLFDSMTNK-TMVSWTTMVVGYAQSGLLDMAWKLFDEMPD-KDVVPWNAMIGGYV 316
Query: 236 QNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF 295
+E L LF M + +E T S LSAC L + IH ++ K+ L N
Sbjct: 317 HANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVA 376
Query: 296 VSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKN 355
+ + ++D+Y KC + A + RNS + +++I G +L GN A +F + + +
Sbjct: 377 LGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNS 436
Query: 356 VVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIH 415
V+ D + + LL AC + G++
Sbjct: 437 --------------------------------VMPDEVTFLGLLSACCHGGLVEEGRKYF 464
Query: 416 AYI-LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVM-IACYAH-- 470
+ + + + K S +VD+ + G + AE + ++ IE D V++ + AC H
Sbjct: 465 SQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGN 524
Query: 471 --------------HGHEEKAILLF------EEMLEKGIKPDAVTFVAILSAFRHCGSVE 510
H+ +L EM ++ K + + C S+E
Sbjct: 525 VLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKARKLMRQRGVEKTPGCSSIE 584
Query: 511 MGEKYFNSMTADYKISPETDH-YACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLN 569
+ + + D K P+++ Y C+I L QLE +E P D + GS
Sbjct: 585 VNGIVYEFIVRD-KSHPQSEQIYECLIQL---TRQLE-LVECTPVFPIFGDNSLFGSDFG 639
Query: 570 VC 571
C
Sbjct: 640 RC 641
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 134/338 (39%), Gaps = 78/338 (23%)
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC---KCENMNYAESM 316
+ F S L C +++ K+I S ++ GLI + F SS ++ +C + +++Y ++
Sbjct: 7 NPFLSLLEKC---KSISQLKQIQSQMVLTGLIEDGFASSRLI-AFCAISEWRDLDYCTNI 62
Query: 317 LLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALF 376
L N+FS W G++ ++N
Sbjct: 63 LFNTRNPNTFS-------------------------------WNVAIRGFLDSENPREAV 91
Query: 377 DLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDM 436
L + +G D +L ACA + + G EI ++L +G D + + ++ +
Sbjct: 92 VLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHL 151
Query: 437 YSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTF 496
CG++ A +F RDLV +N MI Y G +A+ + EM +GIKPD VT
Sbjct: 152 LVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTM 211
Query: 497 VAILSA-----------------------------------FRHCGSVEMGEKYFNSMTA 521
+ ++S+ + CG++E K F+SMT
Sbjct: 212 IGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTN 271
Query: 522 DYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE 559
+S + M+ Y ++ L+ A + +P ++
Sbjct: 272 KTMVS-----WTTMVVGYAQSGLLDMAWKLFDEMPDKD 304
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 195/641 (30%), Positives = 320/641 (49%), Gaps = 56/641 (8%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHK---DLVTYNSMLCGYINAEGYEADALK 109
E NVF N +++ +S L+ A +FD K D++++NS++ ++ AL
Sbjct: 181 ESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRT-ALD 239
Query: 110 LFIEMQS----ADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS 165
LF EM + + R D ++ + L C L + +++H++ ++ A F ++
Sbjct: 240 LFSEMTTIVHEKATNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNA 299
Query: 166 LIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN--- 222
LID Y+KC ++A VF E +++S NAMV + G+ A + F + N
Sbjct: 300 LIDTYAKCGSMKDAVNVFN-VMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPL 358
Query: 223 DAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIH 282
D ++W+ +I+GY Q G +E L F +M G N T S LSAC L + E H
Sbjct: 359 DVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETH 418
Query: 283 SWVLKNGLIS------------NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISS 330
++ LK L+S + V + ++D+Y KC + A ++ NS
Sbjct: 419 AYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIF------NSI---- 468
Query: 331 MIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKE-GVV 389
RR E+NVV WT + GY + + L SE ++K V
Sbjct: 469 -------------PRR------ERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVA 509
Query: 390 TDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK--LISTLVDMYSKCGNMTYAE 447
+A + +L ACA ++L GK+IHAY+ R + + L+DMYSKCG++ A
Sbjct: 510 PNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTAR 569
Query: 448 IIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCG 507
+F + +R+ V + M++ Y HG ++A+ +F++M + G PD ++F+ +L A H G
Sbjct: 570 NVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSG 629
Query: 508 SVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSF 567
V+ G YF+ M +DY + HYAC+IDL R+ +L+KA + ++ +P E A I +
Sbjct: 630 MVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVAL 689
Query: 568 LNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGN 627
L+ CR++ N ELA A KL+ ++ N Y ++N+YA W ++ RIR+ M+
Sbjct: 690 LSACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQLMKKSGIK 749
Query: 628 RFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
+ GCSWV + F VGD SHP + IYS+L G +
Sbjct: 750 KRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRI 790
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 216/466 (46%), Gaps = 58/466 (12%)
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+ D FT+ L C +L + G H + +++ F ++L+ MYS+ E+A
Sbjct: 146 KPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASL 205
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
VF+ T R+G ++D +SWN++++ +V+ +
Sbjct: 206 VFDEIT----------------RKG--------------IDDVISWNSIVAAHVKGSNPR 235
Query: 242 EGLKLFVRMGE------NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF 295
L LF M R + + + L AC L+ + KEIHS+ ++NG ++ F
Sbjct: 236 TALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAF 295
Query: 296 VSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKN 355
V + ++D Y KC +M A ++ + ++ S ++M+ GY+ G A F ++ ++N
Sbjct: 296 VCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKEN 355
Query: 356 ----VVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG 411
V+ W+A+ +GY + + D + + G +++ ++ LL ACA AL G
Sbjct: 356 IPLDVITWSAVIAGYAQRGYGQEALDTFQQMILY-GSEPNSVTIISLLSACASLGALSQG 414
Query: 412 KEIHAYILR----------MGVQMDKKLI--STLVDMYSKCGNMTYAEIIFQNFI--ERD 457
E HAY L+ G + L+ + L+DMYSKC + A IF + ER+
Sbjct: 415 METHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERN 474
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEK--GIKPDAVTFVAILSAFRHCGSVEMGEKY 515
+V + VMI YA +G A+ LF EM+ K + P+A T IL A H S+ MG++
Sbjct: 475 VVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQI 534
Query: 516 FNSMTADYKISPETDHYA-CMIDLYGRANQLEKAIEFMKSIPTEED 560
+T ++ A C+ID+Y + ++ A S+P +
Sbjct: 535 HAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNE 580
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 137/554 (24%), Positives = 233/554 (42%), Gaps = 125/554 (22%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H AI+ G N LI Y+K ++++ +F+ M ++V SWN +++ +S
Sbjct: 282 HSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKF 341
Query: 73 KQARSLFDSSPHK----DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
A LF + + D++T+++++ GY GY +AL F +M + T+
Sbjct: 342 GAAFELFKNMRKENIPLDVITWSAVIAGYAQ-RGYGQEALDTFQQMILYGS--EPNSVTI 398
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVK-----------TSNDASGFAV-SSLIDMYSKCRCY 176
S L+ C L + G + HA+ +K D V ++LIDMYSKCR +
Sbjct: 399 ISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSF 458
Query: 177 EEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQ 236
+ A +F N I + RE + V+W +I GY Q
Sbjct: 459 KAARTIF-------NSIPR--------RE----------------RNVVTWTVMIGGYAQ 487
Query: 237 NGDAEEGLKLFVRM--GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
GD+ + LKLF M V N +T + L AC L +++ K+IH++V ++ +
Sbjct: 488 YGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESS 547
Query: 295 --FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
FV++ ++D+Y KC +++ A ++ RN S +SM+ GY + G +EA FD +
Sbjct: 548 VYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKM- 606
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
K G V D + ++LL AC+ H G
Sbjct: 607 -------------------------------QKAGFVPDDISFLVLLYACS-----HSG- 629
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHH 471
+VD + Y +I+ ++ + Y +I A
Sbjct: 630 --------------------MVDQ-----GLDYFDIMRSDYGVIASAQHYACVIDLLARS 664
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD- 530
G +KA +EM ++P A +VA+LSA R +VE+ E N + + + E D
Sbjct: 665 GRLDKAWKTIQEM---PMEPSAAIWVALLSACRVHSNVELAEYALNKLVS---MKAENDG 718
Query: 531 HYACMIDLYGRANQ 544
Y + ++Y A +
Sbjct: 719 SYTLISNIYATARR 732
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 136/306 (44%), Gaps = 39/306 (12%)
Query: 222 NDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEI 281
+ AV WN L+ +++ G + + + RM G + + T AL AC L + +
Sbjct: 112 SPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYRSGSAF 171
Query: 282 HSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNM 341
H + NG SN FV + +V + YS G++
Sbjct: 172 HGLICCNGFESNVFVCNALVAM-------------------------------YSRSGSL 200
Query: 342 EEARRHFDSLTEK---NVVVWTALFSGYVKAQNCEALFDLLSEFVT-----KEGVVTDAL 393
E+A FD +T K +V+ W ++ + +VK N DL SE T +D +
Sbjct: 201 EDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDII 260
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF 453
+V +L ACA AL KEIH+Y +R G D + + L+D Y+KCG+M A +F
Sbjct: 261 SIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVM 320
Query: 454 IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
+D+V +N M+ Y G A LF+ M ++ I D +T+ A+++ + G +
Sbjct: 321 EFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEAL 380
Query: 514 KYFNSM 519
F M
Sbjct: 381 DTFQQM 386
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 119/299 (39%), Gaps = 29/299 (9%)
Query: 262 FASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKG 321
FAS L C R+V ++IH ++ GL+S P +S + + +Y L G
Sbjct: 34 FASLLKEC---RSVNTVRQIHQKIIAYGLLSYP--ASLLSVSLPPLPSHSYVSPKSLGTG 88
Query: 322 VRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSE 381
V + Y G +A + + V W L +++ + +
Sbjct: 89 V---------VASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCR 139
Query: 382 FVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
+ + G D L L AC + G H I G + + + + LV MYS+ G
Sbjct: 140 ML-RAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSG 198
Query: 442 NMTYAEIIFQNFIER---DLVLYNVMIACYAHHGHEEKAILLFEEML----EKGI--KPD 492
++ A ++F + D++ +N ++A + + A+ LF EM EK + D
Sbjct: 199 SLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSD 258
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC--MIDLYGRANQLEKAI 549
++ V IL A C S++ + + + D + C +ID Y + ++ A+
Sbjct: 259 IISIVNILPA---CASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAV 314
>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Cucumis sativus]
Length = 712
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 186/649 (28%), Positives = 308/649 (47%), Gaps = 99/649 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H ++K GL + + L+ +Y K + S K+FDEMP RN
Sbjct: 139 HGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNA---------------- 182
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
VT+ +++ G + A GY L F M + D + L
Sbjct: 183 ---------------VTWTAVITGLVRA-GYSEAGLAYFSGM--GRSKVEYDSYAYAIAL 224
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ GR +H +K D + F +SL MY+KC
Sbjct: 225 KASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKC------------------- 265
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
G+++ L TF R+ D VSW T+++ Y+Q G + GL+ F RM
Sbjct: 266 -------------GKLDYGLHTF-RKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRA 311
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+ V NE+TF++ +S C +K +++H+ VL G ++ V++ I+ +Y KC
Sbjct: 312 SNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKC----- 366
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G + + F S+ ++++ W+ + + Y +
Sbjct: 367 --------------------------GELASVSKVFCSMKFRDIITWSTIIAAYSQVGYG 400
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
E F+ LS + EG + L +L C A L GK++HA++L +G++ + S
Sbjct: 401 EEAFEYLSR-MRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSA 459
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
L+ MY+KCG++ A IF + + D++ + MI+ YA HGH ++AI LFE + + G++PD
Sbjct: 460 LIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPD 519
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
+VTF+ +L+A H G V++G YFNSM+ DY I+P +HY CMIDL RA +L A +
Sbjct: 520 SVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLI 579
Query: 553 KSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWA 612
+S+P + D V+ + L CR++ + + A ++L+L+ N ++ LAN++AA+G W
Sbjct: 580 RSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWK 639
Query: 613 EMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
E IR M+ + G S V V+ + F GD SHP+ IY++L
Sbjct: 640 EAANIRMLMKSKGVVKEPGWSSVKVKDSVFAFVSGDRSHPQGEDIYNIL 688
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 127/509 (24%), Positives = 232/509 (45%), Gaps = 77/509 (15%)
Query: 10 LICHVQAIKAGLTLTTI----TTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
++C+ Q +K T+ + T + H+Y+K L + +++ ++ N +
Sbjct: 2 VLCYRQHVKRNFTVLAVAGAKTNDNPRHLYTKPLSLTLNAHFSNKV---DLAEANNQLKI 58
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
+K++ LK AR LFD P +D V++ +++ GY+N+ ++AL+LF +M+ E +R+D
Sbjct: 59 LVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSD-SSEALRLFSKMRLQSE-LRIDP 116
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
F ++ L C LN +G LH F VKT S F S+L+DMY K +C+VF+
Sbjct: 117 FLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFD- 175
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
EM + +AV+W +I+G V+ G +E GL
Sbjct: 176 -----------------------EMPTR---------NAVTWTAVITGLVRAGYSEAGLA 203
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
F MG + V ++ + +A AL A + + IH+ LK G N FV++ + +Y
Sbjct: 204 YFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYN 263
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
KC ++Y F + +VV WT + +
Sbjct: 264 KCGKLDY-------------------------------GLHTFRKMRTLDVVSWTTIVTA 292
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
Y++ + + V+ + ++ CA A L G+++HA++L +G
Sbjct: 293 YIQMGKEDCGLQAFKR-MRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVN 351
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
+ ++++ +YSKCG + +F + RD++ ++ +IA Y+ G+ E+A M
Sbjct: 352 ALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMR 411
Query: 486 EKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
+G KP+ ++LS CGS+ + E+
Sbjct: 412 SEGPKPNEFALASVLSV---CGSMAILEQ 437
>gi|242066458|ref|XP_002454518.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
gi|241934349|gb|EES07494.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
Length = 834
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 206/691 (29%), Positives = 344/691 (49%), Gaps = 90/691 (13%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHD- 71
H A+K GL + + L+ +Y K L ++ F M ERN SW +I+ C+++
Sbjct: 186 HALAVKTGLEMDVRAGSALVDMYGKCRSLEDALHFFHGMGERNSVSWGAVIAGCVQNEQY 245
Query: 72 ---------------LKQARSL----FDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
L AR L + D V +++ Y A+ DA + F
Sbjct: 246 MRGLELLCRCKAITCLSTARQLHAHAIKNKFSSDRVVGTAIVDVYAKADSL-VDARRAFF 304
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR---QLHAFMVKTSNDASGFAVSSLIDM 169
+ + TV + + V L+ G G QL FM ++ GF V SL +
Sbjct: 305 GLPN---------HTVETCNAMMVGLVRTGLGAEAMQLFQFMTRS---GIGFGVVSLSGV 352
Query: 170 YSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNT 229
+S AC +G +V++ +NA++ + + A F ++ E D+VSWNT
Sbjct: 353 FS-------ACAEVKGF--DVDVCVRNAILDLYGKCKALVEAYLVF-QEMEQRDSVSWNT 402
Query: 230 LISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG 289
+I+ QN E+ + M +G+ ++ T+ S L AC GL++++ +H +K+G
Sbjct: 403 IIAALEQNECYEDTIVHLNEMLRSGMEADDFTYGSVLKACAGLQSLEYGLVVHGKAIKSG 462
Query: 290 LISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFD 349
L + FVSS +VD+YCKC + A + G + S +S+I G+SL EEA++ F
Sbjct: 463 LGLDAFVSSTVVDMYCKCGMITEALKLHDRIGGQELVSWNSIIAGFSLNKQSEEAQKFFS 522
Query: 350 SLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALH 409
+ + GV D +L +CA A +
Sbjct: 523 EMLDM--------------------------------GVKPDHFTYATVLDSCANLATIE 550
Query: 410 PGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYA 469
GK+IH I++ + D+ + STLVDMY+KCGNM ++++F+ + D V +N MI YA
Sbjct: 551 LGKQIHGQIIKQEMLGDEFISSTLVDMYAKCGNMPDSQLMFEKVQKLDFVSWNAMICGYA 610
Query: 470 HHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPET 529
HG +A+ +FE + + P+ TFVA+L A H G ++ G +YF+ MT+ YK+ P+
Sbjct: 611 LHGQGFEALEMFERTQKANVAPNHATFVAVLRACSHVGLLDDGCRYFHLMTSRYKLEPQL 670
Query: 530 DHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLR 589
+H+ACM ++A++F++S+P E DAVI + L++C++ ++ E+A A +LR
Sbjct: 671 EHFACM--------GPQEALKFIRSMPLEADAVIWKTLLSICKIRQDVEVAETAASNVLR 722
Query: 590 LEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDV 649
L+ ++ + Y+ L+NVYA G W ++ R R+ MR + + GCSW+ V+ E+H F VG+
Sbjct: 723 LDPDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPGCSWIEVQSEMHGFLVGEK 782
Query: 650 SHPKTNAIYSVLAIFTGEL----YEIAGAFY 676
HP++ +Y +L E+ YE A A +
Sbjct: 783 VHPRSREVYEMLNNLICEMKLSGYEPASALF 813
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 146/590 (24%), Positives = 249/590 (42%), Gaps = 110/590 (18%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + + +G T +N L+ +Y++ + +FD MP R+ SWNT+++A D
Sbjct: 54 HARMLVSGFVPTMFVSNCLLQMYARCGGAAHAHGVFDTMPHRDTVSWNTMLTAYAHMGDT 113
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
A SL P D+V++N++L GY G D + L IEM A + D T+ L
Sbjct: 114 GMATSLLCVMPDPDVVSWNALLSGYCQ-RGMFRDLVGLSIEM--ARCGVAPDRTTLAVLL 170
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C L ++ G Q+HA VKT + A S+L+DMY KCR E+A F G E
Sbjct: 171 KACGGLDDLALGVQIHALAVKTGLEMDVRAGSALVDMYGKCRSLEDALHFFHGMGE---- 226
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
++VSW +I+G VQN GL+L R
Sbjct: 227 -----------------------------RNSVSWGAVIAGCVQNEQYMRGLELLCR--- 254
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
C + + A+++H+ +KN S+ V + IVDVY K +++
Sbjct: 255 ----------------CKAITCLSTARQLHAHAIKNKFSSDRVVGTAIVDVYAKADSLVD 298
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK----NVVVWTALFSGYVK 368
A + ++M+VG G EA + F +T VV + +FS +
Sbjct: 299 ARRAFFGLPNHTVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGIGFGVVSLSGVFSACAE 358
Query: 369 AQN-----------------CEALFD---LLSEFVTKEGVVTDALILVI----------- 397
+ C+AL + + E ++ V + +I +
Sbjct: 359 VKGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNTIIAALEQNECYEDTIV 418
Query: 398 -------------------LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYS 438
+L ACA +L G +H ++ G+ +D + ST+VDMY
Sbjct: 419 HLNEMLRSGMEADDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYC 478
Query: 439 KCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVA 498
KCG +T A + ++LV +N +IA ++ + E+A F EML+ G+KPD T+
Sbjct: 479 KCGMITEALKLHDRIGGQELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMGVKPDHFTYAT 538
Query: 499 ILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
+L + + ++E+G++ + + E + ++D+Y + + +
Sbjct: 539 VLDSCANLATIELGKQIHGQIIKQEMLGDEFIS-STLVDMYAKCGNMPDS 587
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 136/555 (24%), Positives = 229/555 (41%), Gaps = 92/555 (16%)
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
G+ HA M+ + + F + L+ MY++C A VF+ + +S N M+ A
Sbjct: 50 GQAAHARMLVSGFVPTMFVSNCLLQMYARCGGAAHAHGVFDTMPHR-DTVSWNTMLTAYA 108
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
G+ MA P+ D VSWN L+SGY Q G + + L + M GV + T A
Sbjct: 109 HMGDTGMATSLLCVMPD-PDVVSWNALLSGYCQRGMFRDLVGLSIEMARCGVAPDRTTLA 167
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
L AC GL ++ +IH+ +K GL + S +VD+Y KC ++ A G R
Sbjct: 168 VLLKACGGLDDLALGVQIHALAVKTGLEMDVRAGSALVDMYGKCRSLEDALHFFHGMGER 227
Query: 324 NSFSISSMIVG------------------------------------------------- 334
NS S ++I G
Sbjct: 228 NSVSWGAVIAGCVQNEQYMRGLELLCRCKAITCLSTARQLHAHAIKNKFSSDRVVGTAIV 287
Query: 335 --YSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ-NCEALFDLLSEFVTKEGVVTD 391
Y+ ++ +ARR F L V A+ G V+ EA+ L +F+T+ G+
Sbjct: 288 DVYAKADSLVDARRAFFGLPNHTVETCNAMMVGLVRTGLGAEAM--QLFQFMTRSGIGFG 345
Query: 392 ALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQ 451
+ L + ACA E+ G +D + + ++D+Y KC + A ++FQ
Sbjct: 346 VVSLSGVFSACA---------EVK------GFDVDVCVRNAILDLYGKCKALVEAYLVFQ 390
Query: 452 NFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEM 511
+RD V +N +IA + E I+ EML G++ D T+ ++L A S+E
Sbjct: 391 EMEQRDSVSWNTIIAALEQNECYEDTIVHLNEMLRSGMEADDFTYGSVLKACAGLQSLEY 450
Query: 512 -----GEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGS 566
G+ + + D +S + ++D+Y + + +A++ I +E V S
Sbjct: 451 GLVVHGKAIKSGLGLDAFVS------STVVDMYCKCGMITEALKLHDRIGGQE-LVSWNS 503
Query: 567 FLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRG--- 623
+ LN+ +E A + ++L + K + A V + N A + + KQ+ G
Sbjct: 504 IIAGFSLNKQSEEAQKFFSEMLDM--GVKPDHFTYATVLDSCANLATI-ELGKQIHGQII 560
Query: 624 ---MKGNRFAGCSWV 635
M G+ F + V
Sbjct: 561 KQEMLGDEFISSTLV 575
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 180/429 (41%), Gaps = 95/429 (22%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT---- 61
L A H AIK + + ++ +Y+K + L ++R+ F +P V + N
Sbjct: 261 LSTARQLHAHAIKNKFSSDRVVGTAIVDVYAKADSLVDARRAFFGLPNHTVETCNAMMVG 320
Query: 62 -------------------------------IISAC--IKSHD----------------- 71
+ SAC +K D
Sbjct: 321 LVRTGLGAEAMQLFQFMTRSGIGFGVVSLSGVFSACAEVKGFDVDVCVRNAILDLYGKCK 380
Query: 72 -LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
L +A +F +D V++N+++ E YE + L ++S E D+FT S
Sbjct: 381 ALVEAYLVFQEMEQRDSVSWNTIIAALEQNECYEDTIVHLNEMLRSGME---ADDFTYGS 437
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L C L ++ +G +H +K+ F S+++DMY KC EA ++ +
Sbjct: 438 VLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEALKLHD------ 491
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
R G E+ VSWN++I+G+ N +EE K F M
Sbjct: 492 -------------RIGGQEL--------------VSWNSIIAGFSLNKQSEEAQKFFSEM 524
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
+ GV+ + T+A+ L +C L ++ K+IH ++K ++ + F+SS +VD+Y KC NM
Sbjct: 525 LDMGVKPDHFTYATVLDSCANLATIELGKQIHGQIIKQEMLGDEFISSTLVDMYAKCGNM 584
Query: 311 NYAESMLLLKGVR--NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
+S L+ + V+ + S ++MI GY+L G EA F+ + NV A F ++
Sbjct: 585 --PDSQLMFEKVQKLDFVSWNAMICGYALHGQGFEALEMFERTQKANVAPNHATFVAVLR 642
Query: 369 AQNCEALFD 377
A + L D
Sbjct: 643 ACSHVGLLD 651
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 1/201 (0%)
Query: 266 LSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNS 325
L A G + + H+ +L +G + FVS+ ++ +Y +C +A + R++
Sbjct: 38 LCASAGHSALATGQAAHARMLVSGFVPTMFVSNCLLQMYARCGGAAHAHGVFDTMPHRDT 97
Query: 326 FSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTK 385
S ++M+ Y+ G+ A + + +VV W AL SGY + L L E + +
Sbjct: 98 VSWNTMLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLSGYCQRGMFRDLVGLSIE-MAR 156
Query: 386 EGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTY 445
GV D L +LL AC L G +IHA ++ G++MD + S LVDMY KC ++
Sbjct: 157 CGVAPDRTTLAVLLKACGGLDDLALGVQIHALAVKTGLEMDVRAGSALVDMYGKCRSLED 216
Query: 446 AEIIFQNFIERDLVLYNVMIA 466
A F ER+ V + +IA
Sbjct: 217 ALHFFHGMGERNSVSWGAVIA 237
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 118/276 (42%), Gaps = 71/276 (25%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L+ L+ H +AIK+GL L ++ ++ +Y K ++ E+ KL D + + + SWN+II+
Sbjct: 447 SLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEALKLHDRIGGQELVSWNSIIA 506
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGY-INAEGYEADALKLFIEMQSADEHIRM 123
G+ +N + EA K F EM D ++
Sbjct: 507 -------------------------------GFSLNKQSEEAQ--KFFSEM--LDMGVKP 531
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
D FT + L+ C L + G+Q+H ++K F S+L+DMY+KC ++ +F
Sbjct: 532 DHFTYATVLDSCANLATIELGKQIHGQIIKQEMLGDEFISSTLVDMYAKCGNMPDSQLMF 591
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
E ++++ +S NAM I GY +G E
Sbjct: 592 EK-VQKLDFVSWNAM--------------------------------ICGYALHGQGFEA 618
Query: 244 LKLFVRMGENGVRWNEHTFASALSAC--CGLRNVKC 277
L++F R + V N TF + L AC GL + C
Sbjct: 619 LEMFERTQKANVAPNHATFVAVLRACSHVGLLDDGC 654
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 83/212 (39%), Gaps = 33/212 (15%)
Query: 396 VILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIE 455
V L A A +AL G+ HA +L G + + L+ MY++CG +A +F
Sbjct: 35 VYQLCASAGHSALATGQAAHARMLVSGFVPTMFVSNCLLQMYARCGGAAHAHGVFDTMPH 94
Query: 456 RDLVLYNVMIACYAHHGHEEKAILLF-------------------------------EEM 484
RD V +N M+ YAH G A L EM
Sbjct: 95 RDTVSWNTMLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLSGYCQRGMFRDLVGLSIEM 154
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
G+ PD T +L A + +G + +++ + + + ++D+YG+
Sbjct: 155 ARCGVAPDRTTLAVLLKACGGLDDLALGVQ-IHALAVKTGLEMDVRAGSALVDMYGKCRS 213
Query: 545 LEKAIEFMKSIPTEEDAVILGSFLNVCRLNRN 576
LE A+ F + E ++V G+ + C N
Sbjct: 214 LEDALHFFHGM-GERNSVSWGAVIAGCVQNEQ 244
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 187/655 (28%), Positives = 327/655 (49%), Gaps = 85/655 (12%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + +GL N L+ +Y++ + +++++F + R+ SWN +I A +S D
Sbjct: 130 HNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDW 189
Query: 73 KQARSLF-----DSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFT 127
A +F D P+ TY +++ G+ E + E
Sbjct: 190 SGALRIFKEMKCDMKPNS--TTYINVISGFSTPE--------VLPE-------------- 225
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
GR++HA +V D+ ++LI+MY KC EA VF+
Sbjct: 226 ----------------GRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFD--- 266
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
+ + D VSWN +I YVQNGD E L+L+
Sbjct: 267 ------------------------------KMKKRDMVSWNVMIGCYVQNGDFHEALELY 296
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
++ G + + TF S L AC ++ + + +HS +L+ GL S V++ +V++Y KC
Sbjct: 297 QKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKC 356
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQG---NMEEARRHFDSLTEKNVVVWTALFS 364
++ A + R++ + S++I Y+ G + +AR+ FD L ++ + W A+ +
Sbjct: 357 GSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMIT 416
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
YV+ A + E G+ DA+ + +L ACA L K +HA I ++
Sbjct: 417 TYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELE 476
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
+ + +TL++MY++CG++ AE +F E+ +V + M+A ++ +G +A+ LF+EM
Sbjct: 477 SNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEM 536
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
+G+KPD VT+ +IL H GS+E G +YF M + ++P DH+A M+DL GR+ +
Sbjct: 537 DLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGR 596
Query: 545 LEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANV 604
L A E ++S+P E D V +FL CR++ EL A E++ L+ ++ A Y+ ++N+
Sbjct: 597 LFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNI 656
Query: 605 YAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
YAA G W ++ +RK+M RG+K + G S++ V+ ++H F+ G HP+T+ I
Sbjct: 657 YAAHGMWEKVASVRKKMEERGLK--KLPGLSFIEVDGKLHEFSSGGKYHPRTDEI 709
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 128/535 (23%), Positives = 233/535 (43%), Gaps = 114/535 (21%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSP--HKDLVTYNSMLCGYINAEGYEADALKL 110
ER+ N +IS K L ARS+F+S +++V++N+M+ Y G+ +AL L
Sbjct: 39 ERDTMVGNALISMYGKCDSLVDARSVFESMDWRQRNVVSWNAMIAAYAQ-NGHSTEALVL 97
Query: 111 FIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMY 170
+ M + + D T S L C L GR++H + + D+ ++L+ MY
Sbjct: 98 YWRMNL--QGLGTDHVTFVSVLGACSSLAQ---GREIHNRVFYSGLDSFQSLANALVTMY 152
Query: 171 SKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTL 230
++ +A R+F+ +L+T D SWN +
Sbjct: 153 ARFGSVGDAKRMFQ--------------------------SLQT-------RDETSWNAV 179
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL 290
I + Q+GD L++F M + ++ N T+ + +S + ++IH+ ++ NG
Sbjct: 180 ILAHSQSGDWSGALRIFKEM-KCDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGF 238
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
S+ V++ ++++Y KC G+ EAR FD
Sbjct: 239 DSDLVVATALINMYGKC-------------------------------GSSHEAREVFDK 267
Query: 351 LTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHP 410
+ ++++V W + YV+ + +L + + EG V +LGAC+ AL
Sbjct: 268 MKKRDMVSWNVMIGCYVQNGDFHEALELYQK-LDMEGFKRTKATFVSILGACSSVKALAQ 326
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
G+ +H++IL G+ + + + LV+MY+KCG++ A +F RD V ++ +I YA
Sbjct: 327 GRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYAS 386
Query: 471 HGHEEK----------------------------------AILLFEEML-EKGIKPDAVT 495
+G+ + A+ +F EM G+KPDAVT
Sbjct: 387 NGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVT 446
Query: 496 FVAILSAFRHCGSV-EMGE-KYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
F+A+L A C S+ + E K ++ ++ ++ +I++Y R LE+A
Sbjct: 447 FIAVLEA---CASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEA 498
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 126/556 (22%), Positives = 227/556 (40%), Gaps = 111/556 (19%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L E H + + G + LI++Y K E+R++FD+M +R++ SWN +I
Sbjct: 223 LPEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGC 282
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
+++ D +A L+ ++ EG+ + +
Sbjct: 283 YVQNGDFHEALELYQK----------------LDMEGF------------------KRTK 308
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
T S L C + + GR +H+ +++ D+ ++L++MY+KC EEA +VF
Sbjct: 309 ATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNA 368
Query: 186 CTEEVNLISKNAMVAACCREG---EMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
+ ++ + ++ A G + A K F R D + WN +I+ YVQNG A
Sbjct: 369 MKNR-DAVAWSTLIGAYASNGYGKDARKARKVFDRLGS-RDTICWNAMITTYVQNGCAVA 426
Query: 243 GLKLFVRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
+K+F M G G++ + TF + L AC L + K +H+ + ++ L SN V++ ++
Sbjct: 427 AMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLI 486
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
++Y +C G++EEA R F + EK VV WTA
Sbjct: 487 NMYARC-------------------------------GSLEEAERLFAAAKEKTVVSWTA 515
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+ + + + DL E + EGV D + +L C +L G + +
Sbjct: 516 MVAAFSQYGRYAEALDLFQE-MDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAEL 574
Query: 422 -GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
G+ + +VD+ + G + A+ + ++ +
Sbjct: 575 HGLAPTADHFAAMVDLLGRSGRLFDAKELLES--------------------------MP 608
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISP-ETDHYACMIDLY 539
FE PD V ++ L+A R G +E+GE + Y++ P T Y M ++Y
Sbjct: 609 FE--------PDPVAWMTFLTACRIHGKLELGEAAAERV---YELDPSSTAPYIAMSNIY 657
Query: 540 GRANQLEKAIEFMKSI 555
EK K +
Sbjct: 658 AAHGMWEKVASVRKKM 673
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 94/180 (52%), Gaps = 10/180 (5%)
Query: 391 DALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIF 450
D + + +L +C+ + G+ +H I + D + + L+ MY KC ++ A +F
Sbjct: 6 DNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVF 65
Query: 451 Q--NFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGS 508
+ ++ +R++V +N MIA YA +GH +A++L+ M +G+ D VTFV++L A C S
Sbjct: 66 ESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGA---CSS 122
Query: 509 VEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEED----AVIL 564
+ G + N + S ++ A ++ +Y R + A +S+ T ++ AVIL
Sbjct: 123 LAQGREIHNRVFYSGLDSFQSLANA-LVTMYARFGSVGDAKRMFQSLQTRDETSWNAVIL 181
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 205/652 (31%), Positives = 326/652 (50%), Gaps = 72/652 (11%)
Query: 44 SRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGY 103
+R++F+ + N F WN +I A I++ +SPH Y SML Y+ A+ Y
Sbjct: 31 TRRIFNFIENTNCFMWNMMIRAYIQT-----------NSPHFAFTLYKSMLSNYLGADNY 79
Query: 104 EADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV 163
L I+ S IR E+ +Q+H ++K D+ +
Sbjct: 80 ---TYPLLIQACS----IRRSEWE----------------AKQVHNHVLKLGFDSDVYVR 116
Query: 164 SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN- 222
++LI+ +S C +ACRVF + ++ +S N+++A G +E A + + PE +
Sbjct: 117 NTLINCFSVCSNMTDACRVFNE-SSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSI 175
Query: 223 -----------------------------DAVSWNTLISGYVQNGDAEEGLKLFVRMGEN 253
D V+W+ LI+ + QN EE ++ FV M +
Sbjct: 176 IASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKI 235
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA 313
GV +E SALSAC L V K IHS LK G S + + ++ +Y KC ++ A
Sbjct: 236 GVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVA 295
Query: 314 ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE 373
+ + + S +SMI GY ++ A+ FDS+ EK+VV W+++ SGY AQN
Sbjct: 296 RKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGY--AQN-- 351
Query: 374 ALFD---LLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
LFD L + + G D LV ++ ACA AAL GK +HAYI R G+ ++ L
Sbjct: 352 DLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILG 411
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+TL+DMY KCG + A +F IE+ + +N +I A +G E ++ +F M + +
Sbjct: 412 TTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVT 471
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
P+ +TF+ +L A RH G V+ G+ +F SM D+KI P HY CM+DL GRA +L++A E
Sbjct: 472 PNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEE 531
Query: 551 FMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGN 610
+ +P D G+ L C+ + ++E+ KL+ L+ ++ +V L+N+YA++G
Sbjct: 532 LLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGK 591
Query: 611 WAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLA 662
W ++ IR M + + GCS + IH F GD +HP +AI +L
Sbjct: 592 WDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLV 643
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 132/525 (25%), Positives = 234/525 (44%), Gaps = 68/525 (12%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACI 67
EA H +K G N LI+ +S + + ++ ++F+E + SWN+I++ I
Sbjct: 96 EAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYI 155
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSAD--------- 118
+ ++++A+ ++ P + ++ NSM+ + G +A KLF EM D
Sbjct: 156 EIGNVEEAKHIYHQMPERSIIASNSMIVLF-GMRGLVVEACKLFDEMLEKDMVTWSALIA 214
Query: 119 ---------EHIR-----------MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDA 158
E IR +DE S L+ C LL V G+ +H+ +K ++
Sbjct: 215 CFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTES 274
Query: 159 SGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQ 218
++LI MYSKC A ++F+ ++LIS N+M++ + ++ A F
Sbjct: 275 YINLQNALIYMYSKCGDIMVARKLFDE-AYLLDLISWNSMISGYLKCNLVDNAKAIFDSM 333
Query: 219 PELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCA 278
PE D VSW+++ISGY QN +E L LF M +G + +E T S +SAC L ++
Sbjct: 334 PE-KDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQG 392
Query: 279 KEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQ 338
K +H+++ +NGL N + + ++D+Y KC
Sbjct: 393 KWVHAYIKRNGLTINVILGTTLIDMYMKC------------------------------- 421
Query: 339 GNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVIL 398
G +E A F + EK + W AL G E+ D+ S + K V + + + +
Sbjct: 422 GCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSN-MKKCHVTPNEITFMGV 480
Query: 399 LGACALQAALHPGK-EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IER 456
LGAC + G+ ++ I +Q + K +VD+ + G + AE + +
Sbjct: 481 LGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTP 540
Query: 457 DLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
D+ + ++ HG E + +++E ++PD F +LS
Sbjct: 541 DVATWGALLGACKKHGDSEMGRRVGRKLIE--LQPDHDGFHVLLS 583
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 116/264 (43%), Gaps = 43/264 (16%)
Query: 316 MLLLKGVRNSFSISSMIVGYSLQG---NMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
MLL +R +++ +S ++ +S +++ RR F+ + N +W + Y++ +
Sbjct: 1 MLLTGFIRETYA-ASRLIKFSTHFPFIHIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSP 59
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
F L ++ + D +L+ AC+++ + K++H ++L++G D + +T
Sbjct: 60 HFAFTLYKSMLSNY-LGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNT 118
Query: 433 LVDMYSKCGNMT-----------------------YAEI--------IFQNFIERDLVLY 461
L++ +S C NMT Y EI I+ ER ++
Sbjct: 119 LINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIAS 178
Query: 462 NVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTA 521
N MI + G +A LF+EMLEK D VT+ A+++ F+ EM E+ +
Sbjct: 179 NSMIVLFGMRGLVVEACKLFDEMLEK----DMVTWSALIACFQQN---EMYEEAIRTFVG 231
Query: 522 DYKISPETDHYACMIDLYGRANQL 545
+KI D + L AN L
Sbjct: 232 MHKIGVMVDEVVAVSALSACANLL 255
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 213/738 (28%), Positives = 333/738 (45%), Gaps = 147/738 (19%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L++ H I G+++ +L+ +Y L + RK+FD++ VF WN ++S
Sbjct: 109 SLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMS 168
Query: 65 ACIKSHDLKQARSLFDSSPHKDLV------------------------------------ 88
K + +++ SLF +V
Sbjct: 169 EYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGS 228
Query: 89 ---TYNSMLCGYINAEGYEADALKLFIEMQSADE-------------------------- 119
NS++ Y G E+ A LF E+ D
Sbjct: 229 NTAVVNSLIAAYFKFGGVES-AHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQM 287
Query: 120 ---HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCY 176
+ +D T+ S L C + N+ GR LH F VK ++L+DMYSKC
Sbjct: 288 LILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNL 347
Query: 177 EEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQ 236
A VF ++M T VSW ++I+ YV+
Sbjct: 348 NGATEVF------------------------VKMGDTTI---------VSWTSIIAAYVR 374
Query: 237 NGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFV 296
G + + LF M GVR + +T S + AC ++ +++HS+V+KNG+ SN V
Sbjct: 375 EGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPV 434
Query: 297 SSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNV 356
++ ++++Y KC G++EEAR F + K++
Sbjct: 435 TNALINMYAKC-------------------------------GSVEEARLVFSKIPVKDI 463
Query: 357 VVWTALFSGY----VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
V W + GY + + E D+ +F D + + +L ACA AAL G+
Sbjct: 464 VSWNTMIGGYSQNLLPNEALELFLDMQKQF------KPDDITMACVLPACAGLAALDKGR 517
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
EIH +ILR G D + LVDMY+KCG + A+++F ++DL+ + VMIA Y HG
Sbjct: 518 EIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHG 577
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
+AI F EM GI+PD +F AIL+A H G + G K+FNSM + + P+ +HY
Sbjct: 578 FGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHY 637
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
AC++DL R L KA +F++S+P + D I G L+ CR++ + +LA + E + LE
Sbjct: 638 ACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEP 697
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVS 650
+N YV LANVYA W E+ ++RK+M RG K N GCSW+ V + +IF G+
Sbjct: 698 DNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQN--PGCSWIEVGGKFNIFVAGNSK 755
Query: 651 HPKTNAIYSVLAIFTGEL 668
HP+ I +L+ T ++
Sbjct: 756 HPQAKKIDVLLSKLTMQM 773
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 132/527 (25%), Positives = 215/527 (40%), Gaps = 92/527 (17%)
Query: 104 EADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV 163
E L+ IE+ + + + + S L LC + ++ G+++H+ ++
Sbjct: 73 EMGDLRNAIELLTKSKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALG 132
Query: 164 SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELND 223
+ L+ MY C G++ K F +ND
Sbjct: 133 AKLVFMYVNC--------------------------------GDLVQGRKIF--DKIMND 158
Query: 224 AVS-WNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIH 282
V WN L+S Y + G+ E + LF +M + GV N +TF L L VK K +H
Sbjct: 159 KVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVH 218
Query: 283 SWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNME 342
+VLK G SN V ++S+I Y G +E
Sbjct: 219 GYVLKLGFGSNTAV-------------------------------VNSLIAAYFKFGGVE 247
Query: 343 EARRHFDSLTEKNVVVWTALFSGYV----KAQNCEALFDLLSEFVTKEGVVTDALILVIL 398
A FD L+E +VV W ++ +G V E +L GV D LV +
Sbjct: 248 SAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLI-----LGVEVDLTTLVSV 302
Query: 399 LGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDL 458
L ACA L G+ +H + ++ + +TL+DMYSKCGN+ A +F + +
Sbjct: 303 LVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTI 362
Query: 459 VLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNS 518
V + +IA Y G AI LF+EM KG++PD T +I+ A S++ G +
Sbjct: 363 VSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSY 422
Query: 519 MTADYKIS--PETDHYACMIDLYGRANQLEKAIEFMKSIPTEE----DAVILGSFLNVCR 572
+ + S P T+ +I++Y + +E+A IP ++ + +I G N+
Sbjct: 423 VIKNGMGSNLPVTN---ALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNL-- 477
Query: 573 LNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRK 619
L EA E L ++ K + +A V A A + + R+
Sbjct: 478 ------LPNEALELFLDMQKQFKPDDITMACVLPACAGLAALDKGRE 518
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 111/267 (41%), Gaps = 68/267 (25%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTI 62
S +L + H IK G+ TN LI++Y+K + E+R +F ++P +++ SWNT+
Sbjct: 410 SSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTM 469
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
I Y+ L +AL+LF++MQ + +
Sbjct: 470 IGG------------------------YSQNL--------LPNEALELFLDMQ---KQFK 494
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
D+ T+ L C L + GR++H +++ + +L+DMY+KC
Sbjct: 495 PDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKC--------- 545
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
G + +A F P+ D +SW +I+GY +G E
Sbjct: 546 -----------------------GLLVLAQLLFDMIPK-KDLISWTVMIAGYGMHGFGNE 581
Query: 243 GLKLFVRMGENGVRWNEHTFASALSAC 269
+ F M G+ +E +F++ L+AC
Sbjct: 582 AISTFNEMRIAGIEPDESSFSAILNAC 608
>gi|357468471|ref|XP_003604520.1| Coatomer subunit beta'-2 [Medicago truncatula]
gi|355505575|gb|AES86717.1| Coatomer subunit beta'-2 [Medicago truncatula]
Length = 1033
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 186/610 (30%), Positives = 306/610 (50%), Gaps = 68/610 (11%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
+VF + ++ +K +Q S+F++ +++V++ +++ G ++A G D L F EM
Sbjct: 185 SVFVSSALVDMYMKVGKTEQGCSVFENMTTRNVVSWTAVIVGLVHA-GCSLDGLSYFSEM 243
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
+ + D T L + + +G+ +HA +K + + + V++L MYSKCR
Sbjct: 244 WRS--KVGYDSHTFAVALKASAESGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCR 301
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
+ R+F G+M D VSW LI Y
Sbjct: 302 KPDYVMRLF----------------------GKMSTP-----------DVVSWTNLIMTY 328
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
VQ GD E L F RM ++ V NE+TFAS +SAC L K ++IH L+ GL+
Sbjct: 329 VQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDAL 388
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
VS+ I+ +Y KC G ++EA FD +T K
Sbjct: 389 SVSNSIITLYSKC-------------------------------GLLQEASLVFDGMTRK 417
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
+++ W+ + S Y + + + F+ LS ++++EG + L +L C A L PGK++
Sbjct: 418 DIISWSTIISVYCQGSHAKEAFNYLS-WMSREGPKPNEFALASVLSVCGSMALLEPGKQV 476
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
HAY L +G+ + + S L+ MYS+ GN+ A IF + D+V + MI YA HG+
Sbjct: 477 HAYALCIGLDHETMVHSALISMYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGYS 536
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC 534
++AI LFE + G+ PD VTF+ IL+A H G V++G Y+ MT +Y+I+P +HY C
Sbjct: 537 QEAISLFENISSVGLMPDYVTFIGILTACNHAGLVDLGFYYYKLMTNEYQIAPSKEHYGC 596
Query: 535 MIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNN 594
+IDL RA +L +A ++++P D V+ + L CR + + + A A E++LRL N+
Sbjct: 597 IIDLLCRAGRLSEAEHMVRNMPFPCDDVVWSTLLRACRDHGDLDRAIWAAEQMLRLHPNS 656
Query: 595 KARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKT 654
++ LAN+Y+A G E +RK M+ + G SW+ +++ F G SHP +
Sbjct: 657 AGAHITLANIYSASGRREEAAHVRKLMKSKGVIKEPGWSWINSNDQLNTFVAGVQSHPLS 716
Query: 655 NAIYSVLAIF 664
I ++L +
Sbjct: 717 KQITTILELL 726
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 133/507 (26%), Positives = 224/507 (44%), Gaps = 77/507 (15%)
Query: 51 MPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKL 110
MPE N + + +K + +AR +F+ H+D +++ +++ GY+NA +AL L
Sbjct: 84 MPELN-----SQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAAN-SNEALIL 137
Query: 111 FIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMY 170
F M D ++ D+F V+ L C +NV FG LH F VK+ S F S+L+DMY
Sbjct: 138 FSNMW-VDSGLQKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMY 196
Query: 171 SKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTL 230
K E+ C VFE N+ ++N VSW +
Sbjct: 197 MKVGKTEQGCSVFE------NMTTRNV---------------------------VSWTAV 223
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL 290
I G V G + +GL F M + V ++ HTFA AL A + K IH+ +K G
Sbjct: 224 IVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAIHAQTIKQGF 283
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
+V + + +Y KC +Y R F
Sbjct: 284 NETAYVVNTLGTMYSKCRKPDY-------------------------------VMRLFGK 312
Query: 351 LTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHP 410
++ +VV WT L YV+ + E D + K V + ++ ACA A
Sbjct: 313 MSTPDVVSWTNLIMTYVQMGDEERALDAFKR-MRKSDVSPNEYTFASVISACANLAITKW 371
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
G++IH + LR+G+ + ++++ +YSKCG + A ++F +D++ ++ +I+ Y
Sbjct: 372 GEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQ 431
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE--KYFNSMTADYKISPE 528
H ++A M +G KP+ ++LS CGS+ + E K ++ + E
Sbjct: 432 GSHAKEAFNYLSWMSREGPKPNEFALASVLSV---CGSMALLEPGKQVHAYALCIGLDHE 488
Query: 529 TDHYACMIDLYGRANQLEKAIEFMKSI 555
T ++ +I +Y R+ L++A + SI
Sbjct: 489 TMVHSALISMYSRSGNLQEASKIFDSI 515
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 112/258 (43%), Gaps = 69/258 (26%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA-CIKSHD 71
H A++ GL +N +I +YSK LL+E+ +FD M +++ SW+TIIS C SH
Sbjct: 376 HGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSH- 434
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
A+ F+ +++ EG + +EF + S
Sbjct: 435 ---AKEAFN-------------YLSWMSREG------------------PKPNEFALASV 460
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L++C + + G+Q+HA+ + D S+LI MYS+ +EA ++F+
Sbjct: 461 LSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALISMYSRSGNLQEASKIFDSI----- 515
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
KN ND VSW +I+GY ++G ++E + LF +
Sbjct: 516 ---KN-------------------------NDIVSWTAMINGYAEHGYSQEAISLFENIS 547
Query: 252 ENGVRWNEHTFASALSAC 269
G+ + TF L+AC
Sbjct: 548 SVGLMPDYVTFIGILTAC 565
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 187/670 (27%), Positives = 320/670 (47%), Gaps = 103/670 (15%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L+E + H A+++G + L+ +YSK + ++ K+F ++ +V +W+ +I+
Sbjct: 66 SLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMIT 125
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
++ +G+ +A +LF M+ + R +
Sbjct: 126 G--------------------------------LDQQGHGQEAAELFHLMRR--KGARPN 151
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
+FT++S ++ + ++ +G+ +H + K ++ + LI MY K RC E+ +VFE
Sbjct: 152 QFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFE 211
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
T D VSWN L+SG+ + G
Sbjct: 212 AMTNP---------------------------------DLVSWNALLSGFYDSQTCGRGP 238
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
++F +M G + N TF S L +C L + + K++H+ ++KN + FV + +VD+Y
Sbjct: 239 RIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMY 298
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
K + E+A FD L +++ WT + S
Sbjct: 299 AKARCL-------------------------------EDAGVAFDRLVNRDIFSWTVIIS 327
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
GY + E + + +EG+ + L L C+ A L G+++HA ++ G
Sbjct: 328 GYAQTDQAEKAVKYFRQ-MQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHF 386
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
D + S LVD+Y KCG M +AE IF+ I RD+V +N +I+ Y+ HG EKA+ F M
Sbjct: 387 GDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMM 446
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
L +GI PD TF+ +LSA G VE G+K F+SM+ Y I+P +HYACM+D+ GRA +
Sbjct: 447 LSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGK 506
Query: 545 LEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANV 604
+ F++ + ++I + L C+L+ N + +A +KL +E + Y+ L+N+
Sbjct: 507 FNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNI 566
Query: 605 YAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLA 662
+A++G W ++ IR M RG+K + GCSWV V+ ++H+F D SHPK IY+ L
Sbjct: 567 FASKGRWDDVRNIRALMTSRGIK--KEPGCSWVEVDGQVHVFLSQDGSHPKIREIYAKLD 624
Query: 663 IFTGELYEIA 672
L I
Sbjct: 625 KLGQSLMSIG 634
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/494 (24%), Positives = 222/494 (44%), Gaps = 81/494 (16%)
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
++ A LF P K+ V++N++L GY G LKLF +M+ + + +FT+++
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQL-GDGKKVLKLFCKMKECE--TKFSKFTLSTV 57
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L C ++ G+ LHA +++ + F SL+DMYSKC +A +VF
Sbjct: 58 LKGCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVF-------- 109
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
T R P D V+W+ +I+G Q G +E +LF M
Sbjct: 110 ----------------------TKIRNP---DVVAWSAMITGLDQQGHGQEAAELFHLMR 144
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
G R N+ T +S +S + +++ + IH + K G S+ VS+ ++ +Y K
Sbjct: 145 RKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSR--- 201
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
+E+ + F+++T ++V W AL SG+ +Q
Sbjct: 202 ----------------------------CVEDGNKVFEAMTNPDLVSWNALLSGFYDSQT 233
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
C + + + EG + + +L +C+ GK++HA+I++ D + +
Sbjct: 234 CGRGPRIFYQMLL-EGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGT 292
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
LVDMY+K + A + F + RD+ + V+I+ YA EKA+ F +M +GIKP
Sbjct: 293 ALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKP 352
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY------ACMIDLYGRANQL 545
+ T + LS H ++E G + + ++ + H+ + ++DLYG+ +
Sbjct: 353 NEYTLASCLSGCSHMATLENGRQL-------HAVAVKAGHFGDIFVGSALVDLYGKCGCM 405
Query: 546 EKAIEFMKSIPTEE 559
E A K + + +
Sbjct: 406 EHAEAIFKGLISRD 419
>gi|242096002|ref|XP_002438491.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
gi|241916714|gb|EER89858.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
Length = 794
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 189/612 (30%), Positives = 315/612 (51%), Gaps = 57/612 (9%)
Query: 57 FSWNTIISACIKSHDLKQARSLFDSS-----PHKDLVTYNSMLCGYINAEGYEADALKLF 111
F++N ++S + + A++LF S P +VT+N+M+ + + G +A+++
Sbjct: 199 FAFNALLSMYARLGLVDDAQTLFGSVGATDVPGGGVVTWNTMVSLLVQS-GRCGEAIEVL 257
Query: 112 IEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSN-DASGFAVSSLIDMY 170
+M + +R D T S L C +L + GR++HA+++K ++ A+ F S+L+DMY
Sbjct: 258 YDMVA--RGVRPDGVTFASALPACSQLEMLSLGREMHAYVLKDADLAANSFVASALVDMY 315
Query: 171 SKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTL 230
+ A VF+ MV A GE ++ L WN +
Sbjct: 316 ASHERVGAARLVFD-------------MVPA----GERQLGL--------------WNAM 344
Query: 231 ISGYVQNGDAEEGLKLFVRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG 289
I GY Q G E+ L+LF RM E GV +E T A L +C + +H +V+K G
Sbjct: 345 ICGYAQAGLDEDALELFARMETEAGVVPSETTIAGVLPSCARSETFAGKEAVHGYVVKRG 404
Query: 290 LISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFD 349
+ NPFV + ++D+Y + +M+ A + R+ S +++I G +QG++ +A +
Sbjct: 405 MADNPFVQNALMDLYARLGDMDAARWIFATIEPRDVVSWNTLITGCVVQGHIRDAFQLVR 464
Query: 350 SLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALH 409
+ ++ A G A +E VV + + L+ LL CA+ AA
Sbjct: 465 EMQQQGRFTDAATEDGIAGAD--------------EEPVVPNNITLMTLLPGCAMLAAPA 510
Query: 410 PGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYA 469
GKEIH Y +R + D + S LVDMY+KCG + + +F R+++ +NV+I Y
Sbjct: 511 RGKEIHGYAVRHALDSDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNVITWNVLIMAYG 570
Query: 470 HHGHEEKAILLFEEMLEKG-IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE 528
HG ++AI LF+ M+ KP+ VTF+A L+A H G V+ G + F SM ++ + P
Sbjct: 571 MHGLGDEAIALFDRMVASDEAKPNEVTFIAALAACSHSGMVDRGLEMFRSMKRNHGVEPT 630
Query: 529 TDHYACMIDLYGRANQLEKAIEFMKSI-PTEEDAVILGSFLNVCRLNRNAELAGEAEEKL 587
D +AC +D+ GRA +L++A + S+ P E+ SFL CRL+RN L A E+L
Sbjct: 631 PDLHACAVDILGRAGRLDEAYRIISSMEPGEQQVSAWSSFLGACRLHRNVALGEIAAERL 690
Query: 588 LRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVG 647
LE + + YV L N+Y+A G W + +R +MR ++ GCSW+ ++ IH F G
Sbjct: 691 FELEPDEASHYVLLCNIYSAAGLWEKSSEVRSRMRQRGVSKEPGCSWIELDGVIHRFMAG 750
Query: 648 DVSHPKTNAIYS 659
+ +HP++ +++
Sbjct: 751 ESAHPESTLVHA 762
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 134/496 (27%), Positives = 219/496 (44%), Gaps = 95/496 (19%)
Query: 15 QAIKAGLTLTTITTNQLIHIYS-KHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLK 73
A K+ L ++T + IH + +H+LL + P V N +++A + DL
Sbjct: 62 PAAKSAAALRSLTAVRSIHGAALRHDLL--------DGPTPAVS--NALLTAYARCGDLT 111
Query: 74 QARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR--------MDE 125
A +LFD+ P +D VT+NS++ AL LF A + +R +
Sbjct: 112 AALALFDAMPSRDAVTFNSLIA-----------ALCLFRRWLPALDALRDMLLEGHPLTS 160
Query: 126 FTVTSTLNLCVKLL-NVGFGRQLHAFMVKTS--NDASGFAVSSLIDMYSKCRCYEEACRV 182
FT+ S L C L ++ GR+ HAF +K + FA ++L+ MY++ ++A +
Sbjct: 161 FTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQTL 220
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
F V A G V+WNT++S VQ+G E
Sbjct: 221 F-------------GSVGATDVPG---------------GGVVTWNTMVSLLVQSGRCGE 252
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG-LISNPFVSSGIV 301
+++ M GVR + TFASAL AC L + +E+H++VLK+ L +N FV+S +V
Sbjct: 253 AIEVLYDMVARGVRPDGVTFASALPACSQLEMLSLGREMHAYVLKDADLAANSFVASALV 312
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT--EKNVVVW 359
D+Y E + AR FD + E+ + +W
Sbjct: 313 DMYASHERVG-------------------------------AARLVFDMVPAGERQLGLW 341
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
A+ GY +A E +L + T+ GVV + +L +CA + +H Y++
Sbjct: 342 NAMICGYAQAGLDEDALELFARMETEAGVVPSETTIAGVLPSCARSETFAGKEAVHGYVV 401
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
+ G+ + + + L+D+Y++ G+M A IF RD+V +N +I GH A
Sbjct: 402 KRGMADNPFVQNALMDLYARLGDMDAARWIFATIEPRDVVSWNTLITGCVVQGHIRDAFQ 461
Query: 480 LFEEMLEKGIKPDAVT 495
L EM ++G DA T
Sbjct: 462 LVREMQQQGRFTDAAT 477
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 108/494 (21%), Positives = 190/494 (38%), Gaps = 115/494 (23%)
Query: 7 KEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISAC 66
KEA+ H +K G+ N L+ +Y++ + +R +F + R+V SWNT+I+ C
Sbjct: 393 KEAV--HGYVVKRGMADNPFVQNALMDLYARLGDMDAARWIFATIEPRDVVSWNTLITGC 450
Query: 67 IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEF 126
+ ++ A L + T + G A+ +E + +
Sbjct: 451 VVQGHIRDAFQLVREMQQQGRFTDAATEDGIAGAD----------------EEPVVPNNI 494
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
T+ + L C L G+++H + V+ + D+ S+L+DMY+KC C + VF+
Sbjct: 495 TLMTLLPGCAMLAAPARGKEIHGYAVRHALDSDVAVGSALVDMYAKCGCLALSRAVFD-- 552
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
R P N ++WN LI Y +G +E + L
Sbjct: 553 ------------------------------RLPRRN-VITWNVLIMAYGMHGLGDEAIAL 581
Query: 247 FVRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKN-GLISNPFVSSGIVDVY 304
F RM + + NE TF +AL+AC V E+ + +N G+ P + + VD+
Sbjct: 582 FDRMVASDEAKPNEVTFIAALAACSHSGMVDRGLEMFRSMKRNHGVEPTPDLHACAVDIL 641
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
+ ++ A + ISSM G E+ V W++ F
Sbjct: 642 GRAGRLDEAYRI-----------ISSMEPG------------------EQQVSAWSS-FL 671
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
G + AL ++ +E + + L P + H Y+L +
Sbjct: 672 GACRLHRNVALGEIAAERLFE----------------------LEPDEASH-YVLLCNIY 708
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH------HGHEEKAI 478
L ++ S+ ++ ++IE D V++ M AH H H +
Sbjct: 709 SAAGLWEKSSEVRSRMRQRGVSKEPGCSWIELDGVIHRFMAGESAHPESTLVHAHMDA-- 766
Query: 479 LLFEEMLEKGIKPD 492
L+E M ++G PD
Sbjct: 767 -LWERMRDQGYTPD 779
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/311 (19%), Positives = 131/311 (42%), Gaps = 40/311 (12%)
Query: 258 NEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI--SNPFVSSGIVDVYCKCENMNYAES 315
+ A + LR++ + IH L++ L+ P VS+ ++ Y +C ++ A +
Sbjct: 56 DRFALPPAAKSAAALRSLTAVRSIHGAALRHDLLDGPTPAVSNALLTAYARCGDLTAALA 115
Query: 316 MLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEAL 375
+ FD++ ++ V + +L + +
Sbjct: 116 L-------------------------------FDAMPSRDAVTFNSLIAALCLFRRWLPA 144
Query: 376 FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG-VQMDKKL-ISTL 433
D L + + + +T ++ +LL L L G+E HA+ L+ G + D++ + L
Sbjct: 145 LDALRDMLLEGHPLTSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNAL 204
Query: 434 VDMYSKCGNMTYAEIIFQNFIERD-----LVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
+ MY++ G + A+ +F + D +V +N M++ G +AI + +M+ +G
Sbjct: 205 LSMYARLGLVDDAQTLFGSVGATDVPGGGVVTWNTMVSLLVQSGRCGEAIEVLYDMVARG 264
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
++PD VTF + L A + +G + + D ++ + + ++D+Y ++ A
Sbjct: 265 VRPDGVTFASALPACSQLEMLSLGREMHAYVLKDADLAANSFVASALVDMYASHERVGAA 324
Query: 549 IEFMKSIPTEE 559
+P E
Sbjct: 325 RLVFDMVPAGE 335
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 187/622 (30%), Positives = 329/622 (52%), Gaps = 72/622 (11%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
+V+ N +I+ K ++ A +F+S +D V++N++L G + E Y +DAL F +M
Sbjct: 282 DVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELY-SDALNYFRDM 340
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
Q++ + + D+ +V + + + N+ G+++HA+ ++ D++ ++L+DMY+KC
Sbjct: 341 QNSGQ--KPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCC 398
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
C + FE C E +LIS W T+I+GY
Sbjct: 399 CVKYMGHAFE-CMHEKDLIS--------------------------------WTTIIAGY 425
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
QN E + LF ++ G+ + S L AC GL++ +EIH +V K L ++
Sbjct: 426 AQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL-ADI 484
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
+ + IV+VY + +++YA RR F+S+ K
Sbjct: 485 MLQNAIVNVYGEVGHIDYA-------------------------------RRAFESIRSK 513
Query: 355 NVVVWTALFSGYV-KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
++V WT++ + V EAL S + + + D++ ++ L A A ++L GKE
Sbjct: 514 DIVSWTSMITCCVHNGLPVEALELFYS--LKQTNIQPDSIAIISALSATANLSSLKKGKE 571
Query: 414 IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH 473
IH +++R G ++ + S+LVDMY+ CG + + +F + +RDL+L+ MI HG
Sbjct: 572 IHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGC 631
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA 533
KAI LF++M ++ + PD +TF+A+L A H G + G+++F M Y++ P +HYA
Sbjct: 632 GNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYA 691
Query: 534 CMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGN 593
CM+DL R+N LE+A F++++P + + I + L C ++ N EL A ++LL+ +
Sbjct: 692 CMVDLLSRSNSLEEAYHFVRNMPIKPSSEIWCALLGACHIHSNKELGELAAKELLQSDTE 751
Query: 594 NKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPK 653
N +Y ++N++AA+G W ++ +R +M+G + GCSW+ V+++IH F D SHP+
Sbjct: 752 NSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQ 811
Query: 654 TNAIYSVLAIFTGELYEIAGAF 675
T+ IY LA FT +L E G +
Sbjct: 812 TDDIYLKLAQFT-KLLEKKGGY 832
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 142/561 (25%), Positives = 251/561 (44%), Gaps = 108/561 (19%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDE--MPERNVFSWNTIISACIKSH 70
H A+K G N LI +Y K L +R LFD M + + SWN+IISA +
Sbjct: 168 HGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHV--- 224
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
AEG +AL LF MQ + + +T +
Sbjct: 225 -----------------------------AEGNCLEALSLFRRMQEVG--VASNTYTFVA 253
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L V G +H ++K+++ A + ++LI MY+KC E+A RVFE
Sbjct: 254 ALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFE------ 307
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
+ CR D VSWNTL+SG VQN + L F M
Sbjct: 308 ---------SMLCR------------------DYVSWNTLLSGLVQNELYSDALNYFRDM 340
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
+G + ++ + + ++A N+ KE+H++ ++NGL SN + + +VD+Y KC +
Sbjct: 341 QNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCV 400
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
Y +G++ F+ + EK+++ WT + +GY AQ
Sbjct: 401 KY--------------------MGHA-----------FECMHEKDLISWTTIIAGY--AQ 427
Query: 371 NCEALFDLLSEF--VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK 428
N E + ++ F V +G+ D +++ +L AC+ + + +EIH Y+ + + D
Sbjct: 428 N-EFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLA-DIM 485
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
L + +V++Y + G++ YA F++ +D+V + MI C H+G +A+ LF + +
Sbjct: 486 LQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTN 545
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
I+PD++ ++ LSA + S++ G K + E + ++D+Y +E +
Sbjct: 546 IQPDSIAIISALSATANLSSLKKG-KEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENS 604
Query: 549 IEFMKSIPTEEDAVILGSFLN 569
+ S+ + D ++ S +N
Sbjct: 605 RKMFHSV-KQRDLILWTSMIN 624
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 151/582 (25%), Positives = 246/582 (42%), Gaps = 123/582 (21%)
Query: 23 LTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSS 82
L+ +L+ +Y K LR++ K+FDEM ER +FS
Sbjct: 77 LSAFLATKLVLMYGKCGSLRDAVKVFDEMSERTIFS------------------------ 112
Query: 83 PHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVG 142
+N+++ ++++ Y +A++L+ +M+ + +D T S L C L
Sbjct: 113 -------WNALMGAFVSSGKY-LEAIELYKDMRVLG--VAIDACTFPSVLKACGALGESR 162
Query: 143 FGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC-TEEVNLISKNAMVAA 201
G ++H VK F ++LI MY KC A +F+G E+ + +S N++++A
Sbjct: 163 LGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISA 222
Query: 202 CCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHT 261
+V G+ E L LF RM E GV N +T
Sbjct: 223 --------------------------------HVAEGNCLEALSLFRRMQEVGVASNTYT 250
Query: 262 FASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKG 321
F +AL VK IH VLK+ ++ +V++ ++ +Y KC
Sbjct: 251 FVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKC-------------- 296
Query: 322 VRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSE 381
G ME+A R F+S+ ++ V W L SG V QN E D L+
Sbjct: 297 -----------------GRMEDAGRVFESMLCRDYVSWNTLLSGLV--QN-ELYSDALNY 336
Query: 382 F--VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
F + G D + ++ L+ A L GKE+HAY +R G+ + ++ +TLVDMY+K
Sbjct: 337 FRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAK 396
Query: 440 CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
C + Y F+ E+DL+ + +IA YA + +AI LF ++ KG+ D + I
Sbjct: 397 CCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMM---I 453
Query: 500 LSAFRHCGSV-------EMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
S R C + E+ F AD + ++++YG ++ A
Sbjct: 454 GSVLRACSGLKSRNFIREIHGYVFKRDLADIMLQ------NAIVNVYGEVGHIDYARRAF 507
Query: 553 KSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNN 594
+SI + +D V S + C N L EA E L+ N
Sbjct: 508 ESIRS-KDIVSWTSMITCCVHN---GLPVEALELFYSLKQTN 545
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 164/385 (42%), Gaps = 69/385 (17%)
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L+LCV + G+QLHA ++K+ S F + L+ MY KC +A +VF+
Sbjct: 53 LDLCVAAKALPQGQQLHALLLKS--HLSAFLATKLVLMYGKCGSLRDAVKVFD------- 103
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
EM+ +T + SWN L+ +V +G E ++L+ M
Sbjct: 104 -----------------EMSERTIF---------SWNALMGAFVSSGKYLEAIELYKDMR 137
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
GV + TF S L AC L + EIH +K G FV + ++ +Y KC
Sbjct: 138 VLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKC---- 193
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT--EKNVVVWTALFSGYVKA 369
G++ AR FD + +++ V W ++ S +V
Sbjct: 194 ---------------------------GDLGGARVLFDGIMMEKEDTVSWNSIISAHVAE 226
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
NC L + + GV ++ V L + + G IH +L+ D +
Sbjct: 227 GNCLEALSLFRR-MQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYV 285
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+ L+ MY+KCG M A +F++ + RD V +N +++ + A+ F +M G
Sbjct: 286 ANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQ 345
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEK 514
KPD V+ + +++A G++ G++
Sbjct: 346 KPDQVSVLNLIAASGRSGNLLKGKE 370
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 115/247 (46%), Gaps = 16/247 (6%)
Query: 317 LLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALF 376
LLLK ++F + +++ Y G++ +A + FD ++E+ + W AL +V +
Sbjct: 71 LLLKSHLSAFLATKLVLMYGKCGSLRDAVKVFDEMSERTIFSWNALMGAFVSSGKYLEAI 130
Query: 377 DLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDM 436
+L + GV DA +L AC G EIH ++ G + + L+ M
Sbjct: 131 ELYKDMRVL-GVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAM 189
Query: 437 YSKCGNMTYAEIIFQNFI--ERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAV 494
Y KCG++ A ++F + + D V +N +I+ + G+ +A+ LF M E G+ +
Sbjct: 190 YGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTY 249
Query: 495 TFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA------CMIDLYGRANQLEKA 548
TFVA L V++G ++ +++H+A +I +Y + ++E A
Sbjct: 250 TFVAALQGVEDPSFVKLGMGIHGAVL-------KSNHFADVYVANALIAMYAKCGRMEDA 302
Query: 549 IEFMKSI 555
+S+
Sbjct: 303 GRVFESM 309
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 12/178 (6%)
Query: 397 ILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER 456
+LL C AL G+++HA +L+ + L + LV MY KCG++ A +F ER
Sbjct: 51 LLLDLCVAAKALPQGQQLHALLLK--SHLSAFLATKLVLMYGKCGSLRDAVKVFDEMSER 108
Query: 457 DLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYF 516
+ +N ++ + G +AI L+++M G+ DA TF ++L A CG+ +GE
Sbjct: 109 TIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKA---CGA--LGESRL 163
Query: 517 NSMTADYKISPETDHYA----CMIDLYGRANQLEKAIEFMKSIPTE-EDAVILGSFLN 569
+ + + +I +YG+ L A I E ED V S ++
Sbjct: 164 GAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIIS 221
>gi|357129947|ref|XP_003566620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Brachypodium distachyon]
Length = 902
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 221/730 (30%), Positives = 338/730 (46%), Gaps = 149/730 (20%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A++ GL + LI++Y+K + ++ +FD E+NV W
Sbjct: 223 HAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMW------------- 269
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
N+ML G + E Y+ +A+++F+ M+ + DEFT S L
Sbjct: 270 ------------------NAMLNGLVRNE-YQVEAIQMFLYMKRLG--LEADEFTYVSVL 308
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C L + GRQ+ +K DAS F ++ +DM+SK ++A +F NL
Sbjct: 309 GACAHLDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLF-------NL 361
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
I+ D VSWN L+ G N + EE + + M
Sbjct: 362 IT--------------------------YKDTVSWNALLVGLTHNEEDEEAIHMLKGMNL 395
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK------ 306
+GV +E +FA+ ++AC +R + K+IH +K+ + SN V S ++D Y K
Sbjct: 396 DGVTPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVES 455
Query: 307 -----------------------CENMNYAESMLLLKGV------RNSFSISSMI----- 332
+N E++ L + V +SF+ SS++
Sbjct: 456 CRKVLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCTG 515
Query: 333 -------------------------VGYSLQGNMEEARRHFDS---LTE----KNVVVWT 360
VG SL G +AR D+ L E KN+V WT
Sbjct: 516 LLSSIIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKLLIEMPDHKNLVEWT 575
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKE-GVVTDALILVILLGACALQAALHPGKEIHAYIL 419
A+ SGY AQN + LLS + + V D + +L AC+ AL GKEIH I+
Sbjct: 576 AIVSGY--AQNGYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEMTALSDGKEIHGLII 633
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIE----RDLVLYNVMIACYAHHGHEE 475
+ G K S ++DMYSKCG++ + F+ F E +D+ L+N MI +A +G+ +
Sbjct: 634 KSGFGSYKTATSAIIDMYSKCGDIISS---FEAFKELKSKQDITLWNSMILGFAKNGYAD 690
Query: 476 KAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACM 535
+A+LLF++M + IK D VTF+ +L A H G + G YF+SM+ Y I P DHYAC
Sbjct: 691 EALLLFQKMQDSQIKSDEVTFLGVLIACAHAGLISEGRHYFDSMSKVYGIMPRVDHYACF 750
Query: 536 IDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNK 595
IDL GR L++A E + +P D VI ++L CR++++ E A ++L+ LE N
Sbjct: 751 IDLLGRGGHLQEAQEVINELPFRPDGVIWATYLAACRMHKDEERGEIAAKELVELEPQNS 810
Query: 596 ARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTN 655
+ YV L+N+YAA GNW E R+ MR +F GCSW+ V ++ +F V D +H
Sbjct: 811 STYVLLSNMYAAAGNWVEAKMAREAMREKGATKFPGCSWITVGNKTSLFLVQDKNHLGAL 870
Query: 656 AIYSVLAIFT 665
IY +L T
Sbjct: 871 RIYEMLDNLT 880
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 132/586 (22%), Positives = 247/586 (42%), Gaps = 103/586 (17%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A K GL L+++Y++ + ++R++F + + W ++IS ++
Sbjct: 54 HCDAEKRGLGSGAFCAAALVNMYARCGRVGDARRVFGGISLPDTVCWASMISGYHRAGRF 113
Query: 73 KQARSLF------DSSPHK------------------------------DLVTYNSMLCG 96
++A LF SSP + V +N+++ G
Sbjct: 114 QEAVCLFTRMEKMGSSPDRVTCVAVVCALTALGRLEDARTLLHRMPAPSSTVAWNAVISG 173
Query: 97 YINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSN 156
Y G E + L+ +M+ + T S L+ GRQ+HA V+
Sbjct: 174 YAQQSGIEHEVFGLYKDMRCWG--LWPTRSTFASMLSAAANATAFIEGRQVHAAAVRHGL 231
Query: 157 DASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFW 216
DA+ F SSLI++Y+KC C +A VF+ C+ E N+
Sbjct: 232 DANVFVGSSLINLYAKCGCIGDAILVFD-CSGEKNV------------------------ 266
Query: 217 RQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVK 276
V WN +++G V+N E +++F+ M G+ +E T+ S L AC L +
Sbjct: 267 --------VMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHC 318
Query: 277 CAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYS 336
+++ +KN + ++ FV++ +D++ K
Sbjct: 319 LGRQVQCVTIKNCMDASLFVANATLDMHSKF----------------------------- 349
Query: 337 LQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILV 396
G +++A+ F+ +T K+ V W AL G + E +L + + +GV D +
Sbjct: 350 --GAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHML-KGMNLDGVTPDEVSFA 406
Query: 397 ILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER 456
++ AC+ A GK+IH ++ + + + S+L+D YSK G++ +
Sbjct: 407 TVINACSNIRATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVDAS 466
Query: 457 DLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYF 516
+V NV+IA + E++AI LF+++L G+KP + TF +ILS S +G++
Sbjct: 467 SIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSIIGKQVH 526
Query: 517 NSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAV 562
++ +T ++ Y +A E A + + +P ++ V
Sbjct: 527 CYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKLLIEMPDHKNLV 572
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 118/476 (24%), Positives = 209/476 (43%), Gaps = 70/476 (14%)
Query: 116 SADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRC 175
SA +R D+F + +TL+ C +L + G+Q H K + F ++L++MY++C
Sbjct: 22 SAGGGVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGR 81
Query: 176 YEEACRVFEGCT---------------------EEVNLISKN-------------AMVAA 201
+A RVF G + E V L ++ A+V A
Sbjct: 82 VGDARRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCA 141
Query: 202 CCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE-EGLKLFVRMGENGVRWNEH 260
G +E A R P + V+WN +ISGY Q E E L+ M G+
Sbjct: 142 LTALGRLEDARTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRS 201
Query: 261 TFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLK 320
TFAS LSA +++H+ +++GL +N FV S ++++Y KC
Sbjct: 202 TFASMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKC------------- 248
Query: 321 GVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ-NCEALFDLL 379
G + +A FD EKNVV+W A+ +G V+ + EA+ L
Sbjct: 249 ------------------GCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFL 290
Query: 380 SEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
++ + G+ D V +LGACA + G+++ ++ + + + +DM+SK
Sbjct: 291 --YMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSK 348
Query: 440 CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
G + A+ +F +D V +N ++ H+ +E+AI + + M G+ PD V+F +
Sbjct: 349 FGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATV 408
Query: 500 LSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSI 555
++A + + E G K + + + I + +ID Y + +E + + +
Sbjct: 409 INACSNIRATETG-KQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQV 463
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 73/162 (45%), Gaps = 10/162 (6%)
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
TA+ +V+A+ C A GV D L L AC+ AL GK+ H
Sbjct: 9 TAVLDAFVRARRCSA----------GGGVRPDQFDLAATLSACSRLGALVSGKQAHCDAE 58
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
+ G+ + LV+MY++CG + A +F D V + MI+ Y G ++A+
Sbjct: 59 KRGLGSGAFCAAALVNMYARCGRVGDARRVFGGISLPDTVCWASMISGYHRAGRFQEAVC 118
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTA 521
LF M + G PD VT VA++ A G +E + M A
Sbjct: 119 LFTRMEKMGSSPDRVTCVAVVCALTALGRLEDARTLLHRMPA 160
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 208/688 (30%), Positives = 349/688 (50%), Gaps = 52/688 (7%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIK-SHD 71
H K +TL+ + T H+++ HNL ++ ++ +M S S +K S D
Sbjct: 31 HKPTFKPTITLSILET----HLHNCHNL-KQFNRILSQMILTGFISDTFAASRLLKFSTD 85
Query: 72 -----LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEF 126
L + +FD + + +N+M+ YI + E AL L+ M ++ D +
Sbjct: 86 SPFIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEK-ALLLYKLM--VKNNVGPDNY 142
Query: 127 TVTSTLNLC-VKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
T + C V+LL G G+++H ++K D+ + ++LI+MY+ C +A ++F+
Sbjct: 143 TYPLVVQACAVRLLEFG-GKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDE 201
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN----------------------- 222
+ ++ +S N+++A ++G++E A F + P+ N
Sbjct: 202 -SPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKL 260
Query: 223 -------DAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNV 275
D VSW+ LISGY QNG EE L +F+ M NG+R +E S LSAC L V
Sbjct: 261 FNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIV 320
Query: 276 KCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSIS--SMIV 333
K K IH V++ G+ S + + ++ +Y + A+ L G N IS SMI
Sbjct: 321 KTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQK--LFNGSHNLDQISWNSMIS 378
Query: 334 GYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDAL 393
G G++E+AR FD + EK++V W+A+ SGY + L E + + D
Sbjct: 379 GCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQ-IRPDET 437
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF 453
ILV ++ AC AAL GK +HAYI + G++++ L +TL+DMY KCG + A +F
Sbjct: 438 ILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGM 497
Query: 454 IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
E+ + +N +I A +G E+++ +F EM G+ P+ +TF+ +L A RH G V+ G
Sbjct: 498 EEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGR 557
Query: 514 KYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRL 573
+F SM + I P HY CM+DL GRA L +A + ++S+P D G+ L C+
Sbjct: 558 CHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKK 617
Query: 574 NRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCS 633
+ + E+ KL+ L+ ++ +V L+N++A++G+W ++ +R M+ + GCS
Sbjct: 618 HGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCS 677
Query: 634 WVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+ +H F GD +HP N + +L
Sbjct: 678 LIEANGVVHEFLAGDKTHPWINKVEGML 705
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 147/313 (46%), Gaps = 37/313 (11%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
+K + H I+ G+ N LIH+YS + +++KLF+ + SWN++IS
Sbjct: 320 VKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISG 379
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
C+K +++AR+LFD P KD+V++++++ GY + + ++ L LF EMQ IR DE
Sbjct: 380 CMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCF-SETLALFHEMQLG--QIRPDE 436
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
+ S ++ C L + G+ +HA++ K + ++L+DMY KC C E A VF G
Sbjct: 437 TILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNG 496
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
E+ SWN LI G NG E L
Sbjct: 497 MEEK---------------------------------GVSSWNALIIGLAVNGLVERSLD 523
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAK-EIHSWVLKNGLISNPFVSSGIVDVY 304
+F M NGV NE TF L AC + V + S + K+G+ N +VD+
Sbjct: 524 MFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLL 583
Query: 305 CKCENMNYAESML 317
+ +N AE ++
Sbjct: 584 GRAGLLNEAEKLI 596
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 197/620 (31%), Positives = 309/620 (49%), Gaps = 74/620 (11%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYI-NAEGYEADALKLF 111
E +V N +I+ +K D+ AR LFD P +D +++N+M+ GY N G E L+LF
Sbjct: 230 ESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEG--LELF 287
Query: 112 IEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYS 171
M+ + D T+T+ + C L N GR +H ++VK+ +SLI MYS
Sbjct: 288 SMMRELS--VDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYS 345
Query: 172 KCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLI 231
EEA VF + E D VSW +I
Sbjct: 346 SLGRLEEAETVFS---------------------------------RMESKDVVSWTAMI 372
Query: 232 SGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI 291
+ V + + ++ + M G+ +E T S LSAC + ++ +H +K GL+
Sbjct: 373 ASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLV 432
Query: 292 SNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL 351
S+ VS+ ++D+Y KC K V N+ + F ++
Sbjct: 433 SHVIVSNSLIDMYSKC------------KCVDNALEV-------------------FRNI 461
Query: 352 TEKNVVVWTALFSGY-VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHP 410
+ KNVV WT+L G + ++ EAL KE + +++ L+ +L ACA AL
Sbjct: 462 SGKNVVSWTSLILGLRINNRSFEALLFFRQ---MKESMKPNSVTLISVLSACARIGALMR 518
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
GKEIHA+ LR GV D L + ++DMY +CG A F N ++D+ +N+++ YA
Sbjct: 519 GKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQF-NSQKKDVTAWNILLTGYAQ 577
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD 530
G + A+ LF++MLE I PD +TF+++L A G V G +YFN M Y ++P
Sbjct: 578 QGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLK 637
Query: 531 HYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRL 590
HYAC++D+ GRA QL+ A +F++ +P DA I G+ LN CR++RN EL A +++
Sbjct: 638 HYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEK 697
Query: 591 EGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVS 650
+ + Y+ L N+YA GNW ++ ++R MR + GCSWV ++ ++H F GD S
Sbjct: 698 DNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNS 757
Query: 651 HPKTNAIYSVLAIFTGELYE 670
H ++ I VL F ++ E
Sbjct: 758 HSQSKEINGVLDGFCSKMKE 777
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 130/568 (22%), Positives = 210/568 (36%), Gaps = 167/568 (29%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H I+ G N LI +Y K + +R LFD+MP+R+ SWN +IS ++
Sbjct: 221 HAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGG 280
Query: 73 KQARSLF----DSSPHKDLVTYNSM---------------LCGYINAEGYEAD------- 106
+ LF + S DL+T ++ + GY+ + D
Sbjct: 281 LEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSL 340
Query: 107 ------------ALKLFIEMQSAD-----------------------------EHIRMDE 125
A +F M+S D E I DE
Sbjct: 341 IQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDE 400
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
T+ S L+ C + ++ G +LH +KT + +SLIDMYSKC+C + A VF
Sbjct: 401 ITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFR- 459
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
N+ KN VSW +LI G N + E L
Sbjct: 460 -----NISGKN---------------------------VVSWTSLILGLRINNRSFEALL 487
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
F +M E+ ++ N T S LSAC + + KEIH+ L+ G+ + F+ + I+D+Y
Sbjct: 488 FFRQMKES-MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYV 546
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
+C G A F+S +K+V W L +G
Sbjct: 547 RC-------------------------------GRKVPALNQFNS-QKKDVTAWNILLTG 574
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
Y + + +L + + E + D + + LL AC+ + G E
Sbjct: 575 YAQQGQAKLAVELFDKMLELE-IHPDEITFISLLCACSKSGMVTEGLE------------ 621
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
+ + + Y+ N+ + Y ++ G + A ++M
Sbjct: 622 ---YFNIMKNKYNLTPNLKH---------------YACVVDILGRAGQLDDAYDFIQDM- 662
Query: 486 EKGIKPDAVTFVAILSAFRHCGSVEMGE 513
I+PDA + A+L+A R +VE+GE
Sbjct: 663 --PIRPDAAIWGALLNACRIHRNVELGE 688
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 97/237 (40%), Gaps = 37/237 (15%)
Query: 337 LQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILV 396
LQGN+E+A + +S+ E + V DA I +
Sbjct: 74 LQGNLEQAMKRLESMLELRI------------------------------EVEEDAYIAL 103
Query: 397 ILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER 456
+ L C + A G ++ + + +L + L+ M+ + GN+ A +F ER
Sbjct: 104 LRL--CEWRRAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSER 161
Query: 457 DLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYF 516
D+ +NV++ YA G ++A+ L+ ML I+P+ TF ++L + G K
Sbjct: 162 DVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARG-KEI 220
Query: 517 NSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE----DAVILGSFLN 569
++ + + D +I +Y + + A +P + +A+I G F N
Sbjct: 221 HAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFEN 277
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 306 bits (783), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 200/670 (29%), Positives = 326/670 (48%), Gaps = 89/670 (13%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIH--IYSKHNLLRESRKLFDEMPERNVFSWNTI 62
L+ + H Q IK GL T ++L+ + S H FD +P
Sbjct: 45 TLQSLRLIHAQMIKTGLHNTNYALSKLLELCVISPH---------FDGLP---------- 85
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
A S+F++ +L+ +N+M G+ + ALKL++ M S +
Sbjct: 86 -----------YAISVFETIQEPNLLIWNTMFRGHALSSD-PVSALKLYVCMISLG--LL 131
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
+ +T L C K G+Q+H ++K D F +SLI +Y + E+A +V
Sbjct: 132 PNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKV 191
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
F+ +++S A++ G +E A K F P + D VSWN +ISGY + G+ +E
Sbjct: 192 FDRSPHR-DVVSYTALIKGYASRGYIESAQKLFDEIP-VKDVVSWNAMISGYAETGNYKE 249
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
L+LF M + +R +E T + +SAC +++ +++HSW+ +G SN + + ++D
Sbjct: 250 ALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMD 309
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
+Y KC G +E A F+ L K+V+ W L
Sbjct: 310 LYSKC-------------------------------GELETACGLFEGLLYKDVISWNTL 338
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
GY + L E + + G + + ++ +L ACA A+ G+ IH YI
Sbjct: 339 IGGYTHMNLYKEALLLFQEML-RSGERPNDVTMLSILPACAHLGAIDIGRWIHVYI---- 393
Query: 423 VQMDKKLIS---------TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH 473
DK+L S +L+DMY+KCG++ A +F + + + L +N MI +A HG
Sbjct: 394 ---DKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGR 450
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA 533
+ A +F M + GI+PD +TFV +LSA G +++G F +MT DYKI+P+ +HY
Sbjct: 451 ADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYG 510
Query: 534 CMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGN 593
CMIDL G + ++A E + ++ E D VI S L C++ N EL + L+++E
Sbjct: 511 CMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPE 570
Query: 594 NKARYVQLANVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSH 651
N YV L+N+YA G W E+ +IR + +GMK + GCS + ++ +H F +GD H
Sbjct: 571 NPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMK--KVPGCSSIEIDSVVHEFIIGDKFH 628
Query: 652 PKTNAIYSVL 661
P+ IY +L
Sbjct: 629 PRNREIYGML 638
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 176/619 (28%), Positives = 272/619 (43%), Gaps = 132/619 (21%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
+S KE H +K G L LI +Y ++ L ++RK+FD P R+V S+
Sbjct: 146 KSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTA 205
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I ++ A+ LFD P KD+V++N+M+ GY Y+ +AL+LF EM + I
Sbjct: 206 LIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYK-EALELFKEMMKTN--I 262
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFA-----VSSLIDMYSKCRCY 176
R DE T+ + ++ C + ++ GRQ+H+++ D GF V+SL+D+YSKC
Sbjct: 263 RPDESTMVTVVSACAQSGSIELGRQVHSWI-----DDHGFGSNLKIVNSLMDLYSKCGEL 317
Query: 177 EEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQ 236
E AC +FEG L+ K D +SWNTLI GY
Sbjct: 318 ETACGLFEG------LLYK---------------------------DVISWNTLIGGYTH 344
Query: 237 NGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFV 296
+E L LF M +G R N+ T S L AC L + + IH ++ K
Sbjct: 345 MNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKR-------- 396
Query: 297 SSGIVDVYCKCENMNYAESMLLLKGVRNSFSI-SSMIVGYSLQGNMEEARRHFDSLTEKN 355
LK N+ S+ +S+I Y+ G++E A + F+S+ K+
Sbjct: 397 ----------------------LKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKS 434
Query: 356 VVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIH 415
+ W A+ G+ +A FD+ S + K G+ D + V LL AC+ L G+
Sbjct: 435 LSSWNAMIFGFAMHGRADAAFDIFSR-MRKIGIEPDDITFVGLLSACSRSGMLDLGR--- 490
Query: 416 AYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEE 475
+I R Q D K+ L Y MI H G +
Sbjct: 491 -HIFRTMTQ-DYKITPKLEH-------------------------YGCMIDLLGHSGLFK 523
Query: 476 KAILLFEEMLEK-GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH-YA 533
+A EEM+ ++PD V + ++L A + G+VE+GE + ++ KI PE Y
Sbjct: 524 EA----EEMINNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLI---KIEPENPGCYV 576
Query: 534 CMIDLY---GRANQLEKAIEF-----MKSIP----TEEDAVILGSFLNVCRLNRNAELAG 581
+ ++Y GR N++ K MK +P E D+V+ + RN E+ G
Sbjct: 577 LLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYG 636
Query: 582 EAEEKLLRLEGNNKARYVQ 600
EE + LE KA +V
Sbjct: 637 MLEEMEVLLE---KAGFVP 652
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 142/320 (44%), Gaps = 64/320 (20%)
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLL 319
H S L C L++++ IH+ ++K GL N NYA S LL
Sbjct: 34 HPSLSLLHNCKTLQSLRL---IHAQMIKTGL-----------------HNTNYALSKLLE 73
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLL 379
V IS G + A F+++ E N+++W +F G+ + + + L
Sbjct: 74 LCV-----ISPHFDG------LPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLY 122
Query: 380 SEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
++ G++ ++ LL +CA A G++IH ++L++G +D + ++L+ +Y +
Sbjct: 123 VCMISL-GLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQ 181
Query: 440 CGNMTYAEIIFQNFIERDLVLY-------------------------------NVMIACY 468
G + A +F RD+V Y N MI+ Y
Sbjct: 182 NGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGY 241
Query: 469 AHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE 528
A G+ ++A+ LF+EM++ I+PD T V ++SA GS+E+G + +S D+
Sbjct: 242 AETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQ-VHSWIDDHGFGSN 300
Query: 529 TDHYACMIDLYGRANQLEKA 548
++DLY + +LE A
Sbjct: 301 LKIVNSLMDLYSKCGELETA 320
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 197/620 (31%), Positives = 309/620 (49%), Gaps = 74/620 (11%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYI-NAEGYEADALKLF 111
E +V N +I+ +K D+ AR LFD P +D +++N+M+ GY N G E L+LF
Sbjct: 230 ESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEG--LELF 287
Query: 112 IEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYS 171
M+ + D T+T+ + C L N GR +H ++VK+ +SLI MYS
Sbjct: 288 SMMRELS--VDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYS 345
Query: 172 KCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLI 231
EEA VF + E D VSW +I
Sbjct: 346 SLGRLEEAETVFS---------------------------------RMESKDVVSWTAMI 372
Query: 232 SGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI 291
+ V + + ++ + M G+ +E T S LSAC + ++ +H +K GL+
Sbjct: 373 ASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLV 432
Query: 292 SNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL 351
S+ VS+ ++D+Y KC K V N+ + F ++
Sbjct: 433 SHVIVSNSLIDMYSKC------------KCVDNALEV-------------------FRNI 461
Query: 352 TEKNVVVWTALFSGY-VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHP 410
+ KNVV WT+L G + ++ EAL KE + +++ L+ +L ACA AL
Sbjct: 462 SGKNVVSWTSLILGLRINNRSFEALLFFRQ---MKESMKPNSVTLISVLSACARIGALMR 518
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
GKEIHA+ LR GV D L + ++DMY +CG A F N ++D+ +N+++ YA
Sbjct: 519 GKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQF-NSQKKDVTAWNILLTGYAQ 577
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD 530
G + A+ LF++MLE I PD +TF+++L A G V G +YFN M Y ++P
Sbjct: 578 QGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLK 637
Query: 531 HYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRL 590
HYAC++D+ GRA QL+ A +F++ +P DA I G+ LN CR++RN EL A +++
Sbjct: 638 HYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEK 697
Query: 591 EGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVS 650
+ + Y+ L N+YA GNW ++ ++R MR + GCSWV ++ ++H F GD S
Sbjct: 698 DNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNS 757
Query: 651 HPKTNAIYSVLAIFTGELYE 670
H ++ I VL F ++ E
Sbjct: 758 HSQSKEINGVLDGFCSKMKE 777
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 130/568 (22%), Positives = 210/568 (36%), Gaps = 167/568 (29%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H I+ G N LI +Y K + +R LFD+MP+R+ SWN +IS ++
Sbjct: 221 HAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGG 280
Query: 73 KQARSLF----DSSPHKDLVTYNSM---------------LCGYINAEGYEAD------- 106
+ LF + S DL+T ++ + GY+ + D
Sbjct: 281 LEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSL 340
Query: 107 ------------ALKLFIEMQSAD-----------------------------EHIRMDE 125
A +F M+S D E I DE
Sbjct: 341 IQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDE 400
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
T+ S L+ C + ++ G +LH +KT + +SLIDMYSKC+C + A VF
Sbjct: 401 ITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFR- 459
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
N+ KN VSW +LI G N + E L
Sbjct: 460 -----NISGKN---------------------------VVSWTSLILGLRINNRSFEALL 487
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
F +M E+ ++ N T S LSAC + + KEIH+ L+ G+ + F+ + I+D+Y
Sbjct: 488 FFRQMKES-MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYV 546
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
+C G A F+S +K+V W L +G
Sbjct: 547 RC-------------------------------GRKVPALNQFNS-QKKDVTAWNILLTG 574
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
Y + + +L + + E + D + + LL AC+ + G E
Sbjct: 575 YAQQGQAKLAVELFDKMLELE-IHPDEITFISLLCACSKSGMVTEGLE------------ 621
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
+ + + Y+ N+ + Y ++ G + A ++M
Sbjct: 622 ---YFNIMKNKYNLTPNLKH---------------YACVVDILGRAGQLDDAYDFIQDM- 662
Query: 486 EKGIKPDAVTFVAILSAFRHCGSVEMGE 513
I+PDA + A+L+A R +VE+GE
Sbjct: 663 --PIRPDAAIWGALLNACRIHRNVELGE 688
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 97/237 (40%), Gaps = 37/237 (15%)
Query: 337 LQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILV 396
LQGN+E+A + +S+ E + V DA I +
Sbjct: 74 LQGNLEQAMKRLESMLELRI------------------------------EVEEDAYIAL 103
Query: 397 ILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER 456
+ L C + A G ++ + + +L + L+ M+ + GN+ A +F ER
Sbjct: 104 LRL--CEWRRAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSER 161
Query: 457 DLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYF 516
D+ +NV++ YA G ++A+ L+ ML I+P+ TF ++L + G K
Sbjct: 162 DVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARG-KEI 220
Query: 517 NSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE----DAVILGSFLN 569
++ + + D +I +Y + + A +P + +A+I G F N
Sbjct: 221 HAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFEN 277
>gi|414881651|tpg|DAA58782.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 736
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 188/617 (30%), Positives = 318/617 (51%), Gaps = 76/617 (12%)
Query: 46 KLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEA 105
KL NVF +++ K + A+ +FD H++ V++ +M+ GY + E
Sbjct: 148 KLPSSCGSNNVFVSTALLNMYCKLGAVSDAKRVFDGMLHRNAVSWAAMVSGYATGKCSE- 206
Query: 106 DALKLF-IEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV- 163
+A +LF + +Q + +EF T+ L+ L + G QLH ++K + GF
Sbjct: 207 EAFELFRLMLQKCP--LEKNEFVTTAVLSAVSVPLGLLMGTQLHGLVLK--DGLVGFVSV 262
Query: 164 -SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN 222
+SL+ MY+K C + A RVF G ++E N
Sbjct: 263 ENSLVTMYAKAECMDAAMRVF-GSSKERN------------------------------- 290
Query: 223 DAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIH 282
+++W+ +I+GY QNG+A ++F++M +G E TF L+AC + + K+ H
Sbjct: 291 -SITWSAMITGYAQNGEANCAARMFLQMHSSGFTPTEFTFVGVLNACSDMGALVVGKQTH 349
Query: 283 SWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNME 342
++K G + +V S +VD+Y KC G +
Sbjct: 350 CLMVKLGFETQVYVKSALVDMYAKC-------------------------------GCIG 378
Query: 343 EARRHFDSLTE-KNVVVWTALFSGYVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLG 400
+A+ F L + +VV+WTA+ +G+V+ ++ EAL +L + K+G++ L + +L
Sbjct: 379 DAKDGFHQLYDVDDVVLWTAMITGHVQNGEHEEAL--MLYSRMDKQGIIPSYLTVTSVLR 436
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL 460
ACA AAL GK++HA IL+ + + + L MYSKCGN+ + ++F+ +RD++
Sbjct: 437 ACACLAALDLGKQLHAQILKCRFSLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDVIS 496
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
+N +I+ ++ HG A+ +FEEM +G PD +TF+ +LSA H G V+ G YF +MT
Sbjct: 497 WNSIISVFSQHGRGSDALDMFEEMKLEGTAPDHITFINLLSACSHMGLVDRGWFYFRAMT 556
Query: 521 ADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELA 580
DY + P DHYACM+D+ RA QL++A +F+ SI + + L CR R+ ++
Sbjct: 557 KDYNLIPTLDHYACMVDILSRAGQLKEAKDFIDSITIDHGTCLWRIVLGACRSLRDFDVG 616
Query: 581 GEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHE 640
A E+L+ L + + Y+ L+N+YAA+ W ++ R+R MR ++ GCSWV + +
Sbjct: 617 AYAGEQLMELGTEDSSAYILLSNIYAAQRKWNDVERVRHLMRLRGVSKDLGCSWVELYNR 676
Query: 641 IHIFTVGDVSHPKTNAI 657
+H+F VG+ HP+ I
Sbjct: 677 VHVFVVGEQQHPEAENI 693
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 184/601 (30%), Positives = 295/601 (49%), Gaps = 67/601 (11%)
Query: 57 FSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQS 116
F +I A D+ AR +FD P + +N+++ GY ++ DAL ++ MQ
Sbjct: 54 FLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQ-DALLMYSNMQL 112
Query: 117 ADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCY 176
A + D FT L C L ++ GR +HA + + DA F + LI +Y+KCR
Sbjct: 113 A--RVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRL 170
Query: 177 EEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQ 236
A VFEG + + +T VSW ++S Y Q
Sbjct: 171 GSARTVFEG----------------------LPLPERTI---------VSWTAIVSAYAQ 199
Query: 237 NGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFV 296
NG+ E L++F M + V+ + S L+A L+++K + IH+ V+K GL P +
Sbjct: 200 NGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDL 259
Query: 297 SSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNV 356
+ +Y KC G + A+ FD + N+
Sbjct: 260 LISLNTMYAKC-------------------------------GQVATAKILFDKMKSPNL 288
Query: 357 VVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHA 416
++W A+ SGY K D+ E + K+ V D + + + ACA +L + ++
Sbjct: 289 ILWNAMISGYAKNGYAREAIDMFHEMINKD-VRPDTISITSAISACAQVGSLEQARSMYE 347
Query: 417 YILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
Y+ R + D + S L+DM++KCG++ A ++F ++RD+V+++ MI Y HG +
Sbjct: 348 YVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRARE 407
Query: 477 AILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMI 536
AI L+ M G+ P+ VTF+ +L A H G V G +FN M AD+KI+P+ HYAC+I
Sbjct: 408 AISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLM-ADHKINPQQQHYACVI 466
Query: 537 DLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKA 596
DL GRA L++A E +K +P + + G+ L+ C+ +R+ EL A ++L ++ +N
Sbjct: 467 DLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTG 526
Query: 597 RYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNA 656
YVQL+N+YAA W + +R +M+ N+ GCSWV V + F VGD SHP+
Sbjct: 527 HYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEE 586
Query: 657 I 657
I
Sbjct: 587 I 587
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 126/264 (47%), Gaps = 6/264 (2%)
Query: 288 NGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNS-FSISSMIVGYSLQGNMEEARR 346
+G+ S+ F +S ++D + + LL+ G++ S F I+ +I S G++ AR+
Sbjct: 16 SGIHSDSFYAS-LIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQ 74
Query: 347 HFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQA 406
FD L + W A+ GY + + + + S V D+ LL AC+ +
Sbjct: 75 VFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLAR-VSPDSFTFPHLLKACSGLS 133
Query: 407 ALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQN--FIERDLVLYNVM 464
L G+ +HA + R+G D + + L+ +Y+KC + A +F+ ER +V + +
Sbjct: 134 HLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAI 193
Query: 465 IACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYK 524
++ YA +G +A+ +F M + +KPD V V++L+AF ++ G S+
Sbjct: 194 VSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVV-KMG 252
Query: 525 ISPETDHYACMIDLYGRANQLEKA 548
+ E D + +Y + Q+ A
Sbjct: 253 LEIEPDLLISLNTMYAKCGQVATA 276
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 129/337 (38%), Gaps = 108/337 (32%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFD--EMPERNVFSWNTI 62
+L+ H Q + G N LI +Y+K L +R +F+ +PER + SW I
Sbjct: 134 HLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAI 193
Query: 63 ISAC-----------IKSH------------------------DLKQARS---------- 77
+SA I SH DLKQ RS
Sbjct: 194 VSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGL 253
Query: 78 -------------------------LFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
LFD +L+ +N+M+ GY GY +A+ +F
Sbjct: 254 EIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAK-NGYAREAIDMFH 312
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
EM + D +R D ++TS ++ C ++ ++ R ++ ++ ++ F S+LIDM++K
Sbjct: 313 EMINKD--VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAK 370
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C E A VF+ +T R D V W+ +I
Sbjct: 371 CGSVEGARLVFD----------------------------RTLDR-----DVVVWSAMIV 397
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
GY +G A E + L+ M GV N+ TF L AC
Sbjct: 398 GYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMAC 434
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 90/184 (48%), Gaps = 13/184 (7%)
Query: 384 TKEGVVTDALILVILLGACALQAALHPG--KEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
T G+ +D+ A + +A H K+IHA +L +G+Q LI+ L+ S G
Sbjct: 14 TNSGIHSDSFY------ASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFG 67
Query: 442 NMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
++T+A +F + + +N +I Y+ + H + A+L++ M + PD+ TF +L
Sbjct: 68 DITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLK 127
Query: 502 AFRHCGSVEMGEKYFNSMTADYKISPETDHYA--CMIDLYGRANQLEKAIEFMKSIPTEE 559
A ++MG ++ ++ +++ + D + +I LY + +L A + +P E
Sbjct: 128 ACSGLSHLQMG-RFVHAQV--FRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPE 184
Query: 560 DAVI 563
++
Sbjct: 185 RTIV 188
>gi|125582503|gb|EAZ23434.1| hypothetical protein OsJ_07125 [Oryza sativa Japonica Group]
Length = 596
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 182/546 (33%), Positives = 292/546 (53%), Gaps = 19/546 (3%)
Query: 143 FGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAAC 202
G +HA +VKT+ + L+ +Y+ + F+ + N S N+++AA
Sbjct: 47 LGAAVHALLVKTALTHHTLLSNRLVALYALLPTPAASLAAFDDLPHK-NAHSYNSLLAAL 105
Query: 203 CR-EGEMEMALKTFWRQPELN-DAVSWNTLISGYVQNGDAEEGLKLFVRM------GENG 254
R G + AL+ P + + VS+NT+IS ++G E L++F ++ G+
Sbjct: 106 ARGRGTLPDALRLLDGMPPASRNVVSYNTVISSLARHGRESEALRVFAQLARDRGLGQQQ 165
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
V + T SA SAC GLR+ + +E+H V+ +G+ +++ +VD Y K + A
Sbjct: 166 VAIDRFTVVSAASACAGLRDARHLRELHGAVVVSGMEVTVIMANAMVDAYSKAGRVEDAR 225
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEA 374
+ +R+S S +SMI GY +++A + FD + ++ + WTAL SG+ QN E
Sbjct: 226 GVFDQMTIRDSVSWTSMIAGYCRASMLDDAVQVFDMMPAQDAIAWTALISGH--EQNGEE 283
Query: 375 LFDL-LSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI--- 430
L L E +T EGVV LV LGACA + GKE+H +ILR + D +
Sbjct: 284 EIALELFERMTGEGVVPTPFALVSCLGACAKVGLVARGKEVHGFILRRSIGSDPFNVFIH 343
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+ L+DMYSKCG+M A +F +ERD++ +N M+ ++H+G ++++ +FE ML+ ++
Sbjct: 344 NALIDMYSKCGDMVAAMAVFDRMLERDIISWNSMVTGFSHNGQGKQSLAVFERMLKDEVQ 403
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
P VTF+A+L+A H G V G + SM D+ + P +HYA ID GR QLE+A E
Sbjct: 404 PTYVTFLAVLTACSHAGLVSDGRRILESMQ-DHGVEPRAEHYAAFIDALGRNRQLEEASE 462
Query: 551 FMKSIPTEEDAVILGSF---LNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAA 607
F+K + ++ GS+ L C ++ N E+A E E L +LE N RYV L+N+Y+A
Sbjct: 463 FIKGLSSKIGLGTTGSWGALLGACHVHGNIEIAEEVAEALFQLEPENSGRYVMLSNIYSA 522
Query: 608 EGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGE 667
G W + ++R M+G + SW+ V+ H+F D SH + N IY +L
Sbjct: 523 AGQWDDARQVRALMKGKGLRKDQAYSWIEVQRAKHMFVADDTSHHEANEIYEMLDKLFHH 582
Query: 668 LYEIAG 673
++ I G
Sbjct: 583 MFIIGG 588
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 186/355 (52%), Gaps = 13/355 (3%)
Query: 12 CHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHD 71
H +K LT T+ +N+L+ +Y+ S FD++P +N S+N++++A +
Sbjct: 51 VHALLVKTALTHHTLLSNRLVALYALLPTPAASLAAFDDLPHKNAHSYNSLLAALARGRG 110
Query: 72 -LKQARSLFDSSP--HKDLVTYNSMLCGYINAEGYEADALKLFIEMQS----ADEHIRMD 124
L A L D P +++V+YN+++ + G E++AL++F ++ + + +D
Sbjct: 111 TLPDALRLLDGMPPASRNVVSYNTVISS-LARHGRESEALRVFAQLARDRGLGQQQVAID 169
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
FTV S + C L + R+LH +V + + + ++++D YSK E+A VF+
Sbjct: 170 RFTVVSAASACAGLRDARHLRELHGAVVVSGMEVTVIMANAMVDAYSKAGRVEDARGVFD 229
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
T + +S +M+A CR ++ A++ F P DA++W LISG+ QNG+ E L
Sbjct: 230 QMTIR-DSVSWTSMIAGYCRASMLDDAVQVFDMMPA-QDAIAWTALISGHEQNGEEEIAL 287
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP---FVSSGIV 301
+LF RM GV S L AC + V KE+H ++L+ + S+P F+ + ++
Sbjct: 288 ELFERMTGEGVVPTPFALVSCLGACAKVGLVARGKEVHGFILRRSIGSDPFNVFIHNALI 347
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNV 356
D+Y KC +M A ++ R+ S +SM+ G+S G +++ F+ + + V
Sbjct: 348 DMYSKCGDMVAAMAVFDRMLERDIISWNSMVTGFSHNGQGKQSLAVFERMLKDEV 402
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 149/321 (46%), Gaps = 41/321 (12%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + +G+ +T I N ++ YSK + ++R +FD+M R+ SW ++I+ ++ L
Sbjct: 193 HGAVVVSGMEVTVIMANAMVDAYSKAGRVEDARGVFDQMTIRDSVSWTSMIAGYCRASML 252
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
A +FD P +D + + +++ G+ G E AL+LF M E + F + S L
Sbjct: 253 DDAVQVFDMMPAQDAIAWTALISGH-EQNGEEEIALELFERMTG--EGVVPTPFALVSCL 309
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAV---SSLIDMYSKCRCYEEACRVFEGCTEE 189
C K+ V G+++H F+++ S + F V ++LIDMYSKC
Sbjct: 310 GACAKVGLVARGKEVHGFILRRSIGSDPFNVFIHNALIDMYSKC---------------- 353
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
G+M A+ F R E D +SWN++++G+ NG ++ L +F R
Sbjct: 354 ----------------GDMVAAMAVFDRMLE-RDIISWNSMVTGFSHNGQGKQSLAVFER 396
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
M ++ V+ TF + L+AC V + I + +G+ + +D + N
Sbjct: 397 MLKDEVQPTYVTFLAVLTACSHAGLVSDGRRILESMQDHGVEPRAEHYAAFIDALGR--N 454
Query: 310 MNYAESMLLLKGVRNSFSISS 330
E+ +KG+ + + +
Sbjct: 455 RQLEEASEFIKGLSSKIGLGT 475
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 190/612 (31%), Positives = 313/612 (51%), Gaps = 46/612 (7%)
Query: 57 FSWNTIISACIKS---HDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIE 113
++ + +I CI S L A S+F + +L+ +N+M G+ + ALKL++
Sbjct: 66 YALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSD-PVSALKLYVC 124
Query: 114 MQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKC 173
M S + + +T L C K G+Q+H ++K D + +SLI MY +
Sbjct: 125 MISLG--LLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQN 182
Query: 174 RCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISG 233
E+A +VF+ +++S A++ G +E A K F P + D VSWN +ISG
Sbjct: 183 GRLEDAHKVFDKSPHR-DVVSYTALIKGYASRGYIENAQKLFDEIP-VKDVVSWNAMISG 240
Query: 234 YVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISN 293
Y + G+ +E L+LF M + VR +E T + +SAC +++ +++H W+ +G SN
Sbjct: 241 YAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSN 300
Query: 294 PFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
+ + ++D+Y KC G +E A F+ L
Sbjct: 301 LKIVNALIDLYSKC-------------------------------GELETACGLFERLPY 329
Query: 354 KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
K+V+ W L GY + L E + + G + + ++ +L ACA A+ G+
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEML-RSGETPNDVTMLSILPACAHLGAIDIGRW 388
Query: 414 IHAYILRM--GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
IH YI + GV L ++L+DMY+KCG++ A +F + + + L +N MI +A H
Sbjct: 389 IHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMH 448
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH 531
G + + LF M + GI+PD +TFV +LSA H G +++G F +MT DYK++P+ +H
Sbjct: 449 GRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEH 508
Query: 532 YACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLE 591
Y CMIDL G + ++A E + + E D VI S L C+++ N EL E L+++E
Sbjct: 509 YGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIE 568
Query: 592 GNNKARYVQLANVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDV 649
N YV L+N+YA+ G W E+ + R + +GMK + GCS + ++ +H F +GD
Sbjct: 569 PENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMK--KVPGCSSIEIDSVVHEFIIGDK 626
Query: 650 SHPKTNAIYSVL 661
HP+ IY +L
Sbjct: 627 FHPRNREIYGML 638
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 165/623 (26%), Positives = 267/623 (42%), Gaps = 140/623 (22%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
+S KE H +K G L LI +Y ++ L ++ K+FD+ P R+V S+
Sbjct: 146 KSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTA 205
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I ++ A+ LFD P KD+V++N+M+ GY Y+ +AL+LF +M + +
Sbjct: 206 LIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYK-EALELFKDMMKTN--V 262
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFA-----VSSLIDMYSKCRCY 176
R DE T+ + ++ C + ++ GRQ+H ++ D GF V++LID+YSKC
Sbjct: 263 RPDESTMVTVVSACAQSGSIELGRQVHLWI-----DDHGFGSNLKIVNALIDLYSKCGEL 317
Query: 177 EEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQ 236
E AC +FE R P D +SWNTLI GY
Sbjct: 318 ETACGLFE--------------------------------RLP-YKDVISWNTLIGGYTH 344
Query: 237 NGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLK--NGLISNP 294
+E L LF M +G N+ T S L AC L + + IH ++ K G+ +
Sbjct: 345 MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNAS 404
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
+ + ++D+Y KC G++E A + F+S+ K
Sbjct: 405 SLRTSLIDMYAKC-------------------------------GDIEAAHQVFNSILHK 433
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
++ W A+ G+ +A FDL S + K G+ D + V LL AC+
Sbjct: 434 SLSSWNAMIFGFAMHGRADASFDLFSR-MRKIGIQPDDITFVGLLSACS----------- 481
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
H+ +L +G + + T+ Y + + Y MI H G
Sbjct: 482 HSGMLDLG----RHIFRTMTQDYKMTPKLEH---------------YGCMIDLLGHSG-- 520
Query: 475 EKAILLFE----EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD 530
LF+ + ++PD V + ++L A + G+VE+GE + ++ KI PE
Sbjct: 521 -----LFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLI---KIEPENP 572
Query: 531 -HYACMIDLY---GRANQLEKAIEF-----MKSIP----TEEDAVILGSFLNVCRLNRNA 577
Y + ++Y GR N++ K MK +P E D+V+ + RN
Sbjct: 573 GSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNR 632
Query: 578 ELAGEAEEKLLRLEGNNKARYVQ 600
E+ G EE + LE KA +V
Sbjct: 633 EIYGMLEEMEVLLE---KAGFVP 652
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 145/331 (43%), Gaps = 64/331 (19%)
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLL 319
H S L C L++++ IH+ ++K GL N NYA S L
Sbjct: 34 HPSLSLLHNCKTLQSLRI---IHAQMIKIGL-----------------HNTNYALSKL-- 71
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLL 379
I I+ +G + A F ++ E N+++W +F G+ + + + L
Sbjct: 72 --------IEFCILSPHFEG-LPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLY 122
Query: 380 SEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
++ G++ ++ +L +CA A G++IH ++L++G +D + ++L+ MY +
Sbjct: 123 VCMISL-GLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQ 181
Query: 440 CGNMTYAEIIFQNFIERDLVLY-------------------------------NVMIACY 468
G + A +F RD+V Y N MI+ Y
Sbjct: 182 NGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGY 241
Query: 469 AHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE 528
A G+ ++A+ LF++M++ ++PD T V ++SA GS+E+G + + D+
Sbjct: 242 AETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ-VHLWIDDHGFGSN 300
Query: 529 TDHYACMIDLYGRANQLEKAIEFMKSIPTEE 559
+IDLY + +LE A + +P ++
Sbjct: 301 LKIVNALIDLYSKCGELETACGLFERLPYKD 331
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 185/615 (30%), Positives = 310/615 (50%), Gaps = 72/615 (11%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLC--GYINAEGYEADALKLFIEMQSA 117
+++ +K D++ A +F+SS ++V +N ML G IN A + +LF +MQ+A
Sbjct: 283 GSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDL---AKSFELFCQMQAA 339
Query: 118 DEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYE 177
IR ++FT L C + G Q+H+ VKT ++ + LIDMYSK E
Sbjct: 340 G--IRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLE 397
Query: 178 EACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQN 237
+A RV E E+ D VSW ++I+GYVQ+
Sbjct: 398 KARRVLEMLKEK---------------------------------DVVSWTSMIAGYVQH 424
Query: 238 GDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVS 297
++ L F M + G+ + ASA+S C G+ ++ +IH+ + +G + +
Sbjct: 425 ECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIW 484
Query: 298 SGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVV 357
+ +V++Y +C G + EA F+ + K+ +
Sbjct: 485 NALVNLYARC-------------------------------GRIREAFSSFEEIEHKDEI 513
Query: 358 VWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
W L SG+ ++ E + + + GV + V L A A A + GK+IHA
Sbjct: 514 TWNGLVSGFAQSGLHEEALKVFMR-MDQSGVKHNVFTFVSALSASANLAEIKQGKQIHAR 572
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
+++ G + ++ + L+ +Y KCG+ A++ F ER+ V +N +I + HG +A
Sbjct: 573 VIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEA 632
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID 537
+ LF++M ++GIKP+ VTF+ +L+A H G VE G YF SM+ +Y I P DHYAC+ID
Sbjct: 633 LDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVID 692
Query: 538 LYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKAR 597
++GRA QL++A +F++ +P DA++ + L+ C++++N E+ A + LL LE ++ A
Sbjct: 693 IFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSAS 752
Query: 598 YVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
YV L+N YA WA ++RK MR + G SW+ V++ +H F VGD HP I
Sbjct: 753 YVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQI 812
Query: 658 YSVLAIFTGELYEIA 672
Y+ LA+ + ++
Sbjct: 813 YNFLAVINDRVAKVG 827
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 128/553 (23%), Positives = 233/553 (42%), Gaps = 110/553 (19%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +A+ GL I N LI +YSK+ L+ +R++F+E+ R
Sbjct: 65 HAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSAR------------------ 106
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
D V++ +ML GY G +AL L+ +M A + + ++S L
Sbjct: 107 -------------DNVSWVAMLSGYAQ-NGLGEEALGLYRQMHRAG--VVPTPYVLSSVL 150
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C K GR +HA K + F +++I +Y +C
Sbjct: 151 SSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRC------------------- 191
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
G +A + F P D V++NTLISG+ Q G E L++F M
Sbjct: 192 -------------GSFRLAERVFCDMPH-RDTVTFNTLISGHAQCGHGEHALEIFEEMQF 237
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+G+ + T +S L+AC L +++ ++HS++ K G+ S+ + ++D+Y KC
Sbjct: 238 SGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKC----- 292
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G++E A F+S NVV+W + + + +
Sbjct: 293 --------------------------GDVETALVIFNSSDRTNVVLWNLMLVAFGQINDL 326
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
F+L + + G+ + +L C + G++IH+ ++ G + D +
Sbjct: 327 AKSFELFCQ-MQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGV 385
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
L+DMYSK G + A + + E+D+V + MIA Y H + A+ F+EM + GI PD
Sbjct: 386 LIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPD 445
Query: 493 AVTFVAILSAFRHCGSVEMGEK-----YFNSMTADYKISPETDHYACMIDLYGRANQLEK 547
+ + +S ++ G + Y + + D I + +++LY R ++ +
Sbjct: 446 NIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSI------WNALVNLYARCGRIRE 499
Query: 548 AIEFMKSIPTEED 560
A + I +++
Sbjct: 500 AFSSFEEIEHKDE 512
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 176/381 (46%), Gaps = 48/381 (12%)
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
++L SKN +V + + + + D VSW ++SGY QNG EE L L+ +
Sbjct: 84 IDLYSKNGLV----------LPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQ 133
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
M GV + +S LS+C + IH+ K+G S FV + ++ +Y +C
Sbjct: 134 MHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRC-- 191
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
G+ A R F + ++ V + L SG+ +
Sbjct: 192 -----------------------------GSFRLAERVFCDMPHRDTVTFNTLISGHAQC 222
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
+ E ++ E + G+ D + + LL ACA L G ++H+Y+ + G+ D +
Sbjct: 223 GHGEHALEIFEE-MQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIM 281
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+L+D+Y KCG++ A +IF + ++VL+N+M+ + K+ LF +M GI
Sbjct: 282 EGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGI 341
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY--ACMIDLYGRANQLEK 547
+P+ T+ IL +++GE+ +S++ K E+D Y +ID+Y + LEK
Sbjct: 342 RPNQFTYPCILRTCTCTREIDLGEQ-IHSLSV--KTGFESDMYVSGVLIDMYSKYGWLEK 398
Query: 548 AIEFMKSIPTEEDAVILGSFL 568
A ++ + E+D V S +
Sbjct: 399 ARRVLEML-KEKDVVSWTSMI 418
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 224/511 (43%), Gaps = 118/511 (23%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R ++L E + H ++K G + LI +YSK+ L ++R++ + + E
Sbjct: 359 REIDLGEQI--HSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKE-------- 408
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
KD+V++ SM+ GY+ E + DAL F EMQ I
Sbjct: 409 -----------------------KDVVSWTSMIAGYVQHECCK-DALAAFKEMQKCG--I 442
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHA--FMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
D + S ++ C + + G Q+HA ++ S D S + ++L+++Y++C EA
Sbjct: 443 WPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIW--NALVNLYARCGRIREA 500
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
FE + E D ++WN L+SG+ Q+G
Sbjct: 501 FSSFE---------------------------------EIEHKDEITWNGLVSGFAQSGL 527
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
EE LK+F+RM ++GV+ N TF SALSA L +K K+IH+ V+K G V +
Sbjct: 528 HEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNA 587
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
++ +Y KC G+ E+A+ F ++E+N V W
Sbjct: 588 LISLYGKC-------------------------------GSFEDAKMEFSEMSERNEVSW 616
Query: 360 TALFSGYVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
+ + + + EAL DL + + KEG+ + + + +L AC+ + G +Y
Sbjct: 617 NTIITSCSQHGRGLEAL-DLFDQ-MKKEGIKPNDVTFIGVLAACSHVGLVEEGL---SYF 671
Query: 419 LRM----GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGH 473
M G++ + ++D++ + G + A+ + I D +++ +++ H +
Sbjct: 672 KSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKN 731
Query: 474 EEKAILLFEEMLEKGIKP-DAVTFVAILSAF 503
E + +LE ++P D+ ++V + +A+
Sbjct: 732 IEVGEFAAKHLLE--LEPHDSASYVLLSNAY 760
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 145/332 (43%), Gaps = 34/332 (10%)
Query: 224 AVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCG-LRNVKCAKEIH 282
A S ++G++ + D + L LF FA AL AC G R + EIH
Sbjct: 6 AASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIH 65
Query: 283 SWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNME 342
+ + GL V + ++D+Y K G +
Sbjct: 66 AKAVTRGLGKYRIVGNLLIDLYSK-------------------------------NGLVL 94
Query: 343 EARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGAC 402
ARR F+ L+ ++ V W A+ SGY + E L + + + GVV +L +L +C
Sbjct: 95 PARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQ-MHRAGVVPTPYVLSSVLSSC 153
Query: 403 ALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYN 462
G+ IHA + G + + + ++ +Y +CG+ AE +F + RD V +N
Sbjct: 154 TKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFN 213
Query: 463 VMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTAD 522
+I+ +A GH E A+ +FEEM G+ PD VT ++L+A G ++ G + +S
Sbjct: 214 TLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQ-LHSYLFK 272
Query: 523 YKISPETDHYACMIDLYGRANQLEKAIEFMKS 554
IS + ++DLY + +E A+ S
Sbjct: 273 AGISSDYIMEGSLLDLYVKCGDVETALVIFNS 304
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 199/679 (29%), Positives = 329/679 (48%), Gaps = 56/679 (8%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R +++ + H IK G L L++ Y + L ++ ++F EMP WN
Sbjct: 686 RVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNE 745
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
I ++S L++ LF M ++ AE
Sbjct: 746 AIILNLQSEKLQKGVELF-----------RKMQFSFLKAETA------------------ 776
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
T+ L C K+ + +Q+H ++ + D+ + LI MYSK E A R
Sbjct: 777 -----TIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARR 831
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN---DAVSWNTLISGYVQNG 238
VF+ E N S N+M+++ G + A F+ + D V+WN L+SG+ +G
Sbjct: 832 VFDS-MENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHG 890
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
EE L + RM G + N + S L A L + KE H +VL+NG + +V +
Sbjct: 891 YKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGT 950
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK---- 354
++D+Y K ++ A+++ RN F+ +S++ GYS +G E+A R + + ++
Sbjct: 951 SLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKP 1010
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
++V W + SGY C ++ + ++ + LL ACA + L GKEI
Sbjct: 1011 DLVTWNGMISGYA-MWGC-----------ARKAFMPNSASITCLLRACASLSLLQKGKEI 1058
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
H +R G D + + L+DMYSK ++ A +F+ + L +N MI +A G
Sbjct: 1059 HCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLG 1118
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC 534
++AI +F EM + G+ PDA+TF A+LSA ++ G + G KYF+SM DY+I P +HY C
Sbjct: 1119 KEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCC 1178
Query: 535 MIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNN 594
M+DL GRA L++A + + ++P + DA I G+ L CR+++N A A + L +LE NN
Sbjct: 1179 MVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLXFAETAAKNLFKLEPNN 1238
Query: 595 KARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGC-SWVYVEHEIHIFTVGDVSHPK 653
A Y+ + N+Y+ W +M +R+ M G G R SW+ + +H+F+ + HP
Sbjct: 1239 SANYILMMNLYSIFNRWEDMDHLRELM-GAAGVRNRQVWSWIQINQRVHVFSSDEKPHPD 1297
Query: 654 TNAIYSVLAIFTGELYEIA 672
IY L E+ ++
Sbjct: 1298 AGKIYFELYQLVSEMKKLG 1316
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 113/468 (24%), Positives = 218/468 (46%), Gaps = 50/468 (10%)
Query: 50 EMPERNVFSWNT------IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGY 103
++P++ WN +IS+ + D A +F ++ + +NS + + ++ G
Sbjct: 599 KLPQK----WNPDAAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGS 654
Query: 104 EADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV 163
L++F E+ + + D + L C +++++ G ++H ++K D +
Sbjct: 655 LHIVLEVFKELHG--KGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLR 712
Query: 164 SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELND 223
+L++ Y +C E+A +VF EM PE
Sbjct: 713 CALMNFYGRCWGLEKANQVFH------------------------EMP------NPE--- 739
Query: 224 AVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHS 283
A+ WN I +Q+ ++G++LF +M + ++ T L AC + + AK+IH
Sbjct: 740 ALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHG 799
Query: 284 WVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEE 343
+V + GL S+ + + ++ +Y K + A + RN+ S +SMI Y+ G + +
Sbjct: 800 YVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLND 859
Query: 344 ARRHFDSL----TEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILL 399
A F L + ++V W L SG+ E + ++L + EG ++ + +L
Sbjct: 860 AWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQR-MQGEGFKPNSSSMTSVL 918
Query: 400 GACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLV 459
A + L+ GKE H Y+LR G D + ++L+DMY K ++ A+ +F N R++
Sbjct: 919 QAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIF 978
Query: 460 LYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCG 507
+N +++ Y+ G E A+ L +M ++GIKPD VT+ ++S + G
Sbjct: 979 AWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWG 1026
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 151/363 (41%), Gaps = 44/363 (12%)
Query: 147 LHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREG 206
+ A +V + + AS A+S+ +D++ + C + G + L K AA
Sbjct: 560 IKALVVDSPSRASTGAISAGVDVFR----FNTTCGML-GALVMIKLPQKWNPDAAAKNLI 614
Query: 207 EMEMALKTFWRQPEL------NDAVSWNTLISGYVQN-GDAEEGLKLFVRMGENGVRWNE 259
+ FW + + + WN+ + + + G L++F + GV ++
Sbjct: 615 SSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDS 674
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLL 319
++ AL C + ++ EIH ++K G +DVY +C MN+
Sbjct: 675 EVYSVALKTCTRVMDIWLGMEIHGCLIKRGF---------DLDVYLRCALMNF------- 718
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLL 379
Y +E+A + F + ++W ++++ + +L
Sbjct: 719 ---------------YGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELF 763
Query: 380 SEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
+ + + + +V +L AC AL+ K+IH Y+ R G+ D L + L+ MYSK
Sbjct: 764 RK-MQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSK 822
Query: 440 CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
G + A +F + R+ +N MI+ YA G A LF E+ +KPD VT+ +
Sbjct: 823 NGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCL 882
Query: 500 LSA 502
LS
Sbjct: 883 LSG 885
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/336 (20%), Positives = 137/336 (40%), Gaps = 25/336 (7%)
Query: 238 GDAEEGLKLFVRMGENGV---RWNEHTFASALSACC---GLRNVKCAKEIHSWVLKNGLI 291
G EE K+ V M +G RW+ L + + N + ++ + ++K ++
Sbjct: 508 GKDEE--KVLVPMFPDGRPRERWSRKDPVLPLKSSARIGAVSNTRMSRAMEVLIIKALVV 565
Query: 292 SNP------FVSSGIVDVY---CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNME 342
+P +S+G VDV+ C + + L + + ++I Y G+
Sbjct: 566 DSPSRASTGAISAG-VDVFRFNTTCGMLGALVMIKLPQKWNPDAAAKNLISSYLGFGDFW 624
Query: 343 EARRHFDSLTEKNVVVWTALFSGY-VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGA 401
A F +N + W + + A + + ++ E K GVV D+ + + L
Sbjct: 625 SAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGK-GVVFDSEVYSVALKT 683
Query: 402 CALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLY 461
C + G EIH +++ G +D L L++ Y +C + A +F + +L+
Sbjct: 684 CTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLW 743
Query: 462 NVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTA 521
N I +K + LF +M +K + T V +L A G++ ++ +
Sbjct: 744 NEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYV-- 801
Query: 522 DYKISPETDHYAC--MIDLYGRANQLEKAIEFMKSI 555
++ ++D C +I +Y + +LE A S+
Sbjct: 802 -FRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSM 836
>gi|359477376|ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 642
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 190/656 (28%), Positives = 331/656 (50%), Gaps = 53/656 (8%)
Query: 17 IKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQAR 76
I++ + + N+L+ +YS+ + K+FDE+ + N + W ++I
Sbjct: 27 IESSVASSEFVINKLLRLYSRFGATDYAHKVFDEITQPNAYLWTSLIH------------ 74
Query: 77 SLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCV 136
GY+ Y+ +A LFI+M+ E I + FT++S L
Sbjct: 75 -------------------GYVENRQYD-EAFSLFIQMRR--EPISVLNFTISSVLKALA 112
Query: 137 KLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKN 196
+L G+ ++ F++K +S++D++ +CR + A + F+ E+ +++S N
Sbjct: 113 RLTRFKGGQAVYGFVLKYGFAFDLIVQNSVLDLFMRCRKVDTARQAFDEMCEK-DIVSWN 171
Query: 197 AMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG-ENGV 255
M++ +++A K F R PE N VSW ++I GYV+ GD E LF M ++
Sbjct: 172 MMISGYGNNDRVDIARKFFDRMPERN-VVSWTSMICGYVKAGDMAEAQVLFDSMPVKDLA 230
Query: 256 RWNEHTFASA-LSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
WN + C R + IH N +IS +CK + A+
Sbjct: 231 SWNVMVSGYMDIGDCVNARIIFGKMPIHDTGSWNIMISG----------FCKAGELESAK 280
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEA 374
+N S M+ GY G+ AR FD + KN+V W+ + GY A+N +
Sbjct: 281 DFFDRMPNKNVISWGIMLDGYIKNGDTNGARCLFDQMPMKNLVTWSTMIGGY--ARNGQP 338
Query: 375 LFDL-LSEFVTKEGVVTDALILVILLGACALQAALHPGKEI-HAYILRMGVQMDKKLIST 432
L L L E ++ + D ++ ++ AC+ + + I H Y+ + D ++ ++
Sbjct: 339 LKALELFERFKEQDIKPDETFILGIISACSQLGIIDAAESIIHNYV-GPSLLSDLRVFTS 397
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
L+DMY+KCG++ A +F+ +DL+ Y+ MIA A+HG AI LF++M IKPD
Sbjct: 398 LIDMYAKCGSIEKALQMFEMAHPKDLLCYSTMIAALANHGLGRDAIFLFDKMQRANIKPD 457
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
+VTF+ +L+A H G V+ G KYF MT ++ I P HYAC++DL GR LE+A +
Sbjct: 458 SVTFLGVLTACNHGGLVDEGRKYFKQMTEEFGIQPSEKHYACVVDLLGRVGCLEEAYNLI 517
Query: 553 KSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWA 612
+++P +V+ G+ L CR++ N +LA A +L ++E +N Y+ L+N+YAA G W
Sbjct: 518 RNMPIAPHSVVWGALLAACRVHCNVQLAEVAAAELFKIEPDNSGNYILLSNIYAAAGRWG 577
Query: 613 EMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
+ ++R ++R + + G SW+ + H +H F +GD+SH +++I +L + ++
Sbjct: 578 SVAKVRAKIREHRVRKNRGSSWIELSHVVHEFVMGDMSHTDSDSISLILYLLCEDM 633
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 212/712 (29%), Positives = 351/712 (49%), Gaps = 88/712 (12%)
Query: 21 LTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFD 80
L + +T NQ K N F P ++ I S+C+ D
Sbjct: 8 LCFSPLTLNQ----NRKENFFSSQNGCFIHKPTSKATFFSPIFSSCLPIRISATPTRTID 63
Query: 81 SSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLN 140
+ + YN+ + + E +A++L Q ++ ++ T +S L LC +
Sbjct: 64 ----RQVTDYNAKILHFCQLGNLE-NAMELVCMCQKSE----LETKTYSSVLQLCAGSKS 114
Query: 141 VGFGRQLHAFMVKTSNDASGFAVS-SLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMV 199
+ G+++H+ ++K++N A + L+ +Y+ C +E RVF+ E+ N+ N MV
Sbjct: 115 LTDGKKVHS-IIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFD-TMEKKNVYLWNFMV 172
Query: 200 AACCREGEMEMALKTF---------WRQPEL----------NDAVSWNTLISGYVQNGDA 240
+ + G+ + ++ F ++PE D +SWN++ISGYV NG
Sbjct: 173 SEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLT 232
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
E GL+++ +M G+ + T S L C + K +HS +K+ S+ +
Sbjct: 233 ERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTL 292
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK----NV 356
+D+Y KC +++ A + G RN S +SMI GY+ G + A R + ++ +V
Sbjct: 293 LDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDV 352
Query: 357 VVWTALF-----SG----------YVKAQN-------CEALFDLLSEFVTKEG------- 387
V T++ SG Y+KA N C AL D+ ++ + +G
Sbjct: 353 VATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFST 412
Query: 388 ---------------VVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
+ D+ + +L ACA +AL GKEIH YILR G D+ + +
Sbjct: 413 MVVKDIISWNTMIGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANA 472
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
LVD+Y KCG + A ++F +DLV + VMI+ Y HG+ +AI F EM + GI+PD
Sbjct: 473 LVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPD 532
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
V+F++IL A H G +E G ++F M D+ I P+ +HYACM+DL R L KA EF+
Sbjct: 533 EVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFI 592
Query: 553 KSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWA 612
+++P DA I G+ L CR+ + ELA + E++ LE N YV LAN+YA W
Sbjct: 593 ETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWE 652
Query: 613 EMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVG-DVSHPKTNAIYSVL 661
E+ R+R+++ +G++ N GCSW+ ++ ++++F G + SHP + I S+L
Sbjct: 653 EVKRMREKIGKKGLRKN--PGCSWIEIKGKVNLFVSGNNSSHPHSKKIESLL 702
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 185/615 (30%), Positives = 310/615 (50%), Gaps = 72/615 (11%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLC--GYINAEGYEADALKLFIEMQSA 117
+++ +K D++ A +F+SS ++V +N ML G IN A + +LF +MQ+A
Sbjct: 283 GSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDL---AKSFELFCQMQAA 339
Query: 118 DEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYE 177
IR ++FT L C + G Q+H+ VKT ++ + LIDMYSK E
Sbjct: 340 G--IRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLE 397
Query: 178 EACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQN 237
+A RV E E+ D VSW ++I+GYVQ+
Sbjct: 398 KARRVLEMLKEK---------------------------------DVVSWTSMIAGYVQH 424
Query: 238 GDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVS 297
++ L F M + G+ + ASA+S C G+ ++ +IH+ + +G + +
Sbjct: 425 ECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIW 484
Query: 298 SGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVV 357
+ +V++Y +C G + EA F+ + K+ +
Sbjct: 485 NALVNLYARC-------------------------------GRIREAFSSFEEIEHKDEI 513
Query: 358 VWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
W L SG+ ++ E + + + GV + V L A A A + GK+IHA
Sbjct: 514 TWNGLVSGFAQSGLHEEALKVFMR-MDQSGVKHNVFTFVSALSASANLAEIKQGKQIHAR 572
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
+++ G + ++ + L+ +Y KCG+ A++ F ER+ V +N +I + HG +A
Sbjct: 573 VIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEA 632
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID 537
+ LF++M ++GIKP+ VTF+ +L+A H G VE G YF SM+ +Y I P DHYAC+ID
Sbjct: 633 LDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVID 692
Query: 538 LYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKAR 597
++GRA QL++A +F++ +P DA++ + L+ C++++N E+ A + LL LE ++ A
Sbjct: 693 IFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSAS 752
Query: 598 YVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
YV L+N YA WA ++RK MR + G SW+ V++ +H F VGD HP I
Sbjct: 753 YVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQI 812
Query: 658 YSVLAIFTGELYEIA 672
Y+ LA+ + ++
Sbjct: 813 YNFLAVINDRVAKVG 827
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 128/553 (23%), Positives = 233/553 (42%), Gaps = 110/553 (19%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +A+ GL I N LI +YSK+ L+ +R++F+E+ R
Sbjct: 65 HAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSAR------------------ 106
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
D V++ +ML GY G +AL L+ +M A + + ++S L
Sbjct: 107 -------------DNVSWVAMLSGYAQ-NGLGEEALGLYRQMHRAG--VVPTPYVLSSVL 150
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C K GR +HA K + F +++I +Y +C
Sbjct: 151 SSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRC------------------- 191
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
G +A + F P D V++NTLISG+ Q G E L++F M
Sbjct: 192 -------------GSFRLAERVFCDMPH-RDTVTFNTLISGHAQCGHGEHALEIFEEMQF 237
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+G+ + T +S L+AC L +++ ++HS++ K G+ S+ + ++D+Y KC
Sbjct: 238 SGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKC----- 292
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G++E A F+S NVV+W + + + +
Sbjct: 293 --------------------------GDVETALVIFNSSDRTNVVLWNLMLVAFGQINDL 326
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
F+L + + G+ + +L C + G++IH+ ++ G + D +
Sbjct: 327 AKSFELFCQ-MQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGV 385
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
L+DMYSK G + A + + E+D+V + MIA Y H + A+ F+EM + GI PD
Sbjct: 386 LIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPD 445
Query: 493 AVTFVAILSAFRHCGSVEMGEK-----YFNSMTADYKISPETDHYACMIDLYGRANQLEK 547
+ + +S ++ G + Y + + D I + +++LY R ++ +
Sbjct: 446 NIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSI------WNALVNLYARCGRIRE 499
Query: 548 AIEFMKSIPTEED 560
A + I +++
Sbjct: 500 AFSSFEEIEHKDE 512
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 176/381 (46%), Gaps = 48/381 (12%)
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
++L SKN +V + + + + D VSW ++SGY QNG EE L L+ +
Sbjct: 84 IDLYSKNGLV----------LPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQ 133
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
M GV + +S LS+C + IH+ K+G S FV + ++ +Y +C
Sbjct: 134 MHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRC-- 191
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
G+ A R F + ++ V + L SG+ +
Sbjct: 192 -----------------------------GSFRLAERVFCDMPHRDTVTFNTLISGHAQC 222
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
+ E ++ E + G+ D + + LL ACA L G ++H+Y+ + G+ D +
Sbjct: 223 GHGEHALEIFEE-MQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIM 281
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+L+D+Y KCG++ A +IF + ++VL+N+M+ + K+ LF +M GI
Sbjct: 282 EGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGI 341
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY--ACMIDLYGRANQLEK 547
+P+ T+ IL +++GE+ +S++ K E+D Y +ID+Y + LEK
Sbjct: 342 RPNQFTYPCILRTCTCTREIDLGEQ-IHSLSV--KTGFESDMYVSGVLIDMYSKYGWLEK 398
Query: 548 AIEFMKSIPTEEDAVILGSFL 568
A ++ + E+D V S +
Sbjct: 399 ARRVLEML-KEKDVVSWTSMI 418
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 123/511 (24%), Positives = 224/511 (43%), Gaps = 118/511 (23%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R ++L E + H ++K G + LI +YSK+ L ++R++ + + E
Sbjct: 359 REIDLGEQI--HSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKE-------- 408
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
KD+V++ SM+ GY+ E + DAL F EMQ I
Sbjct: 409 -----------------------KDVVSWTSMIAGYVQHECCK-DALAAFKEMQKCG--I 442
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHA--FMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
D + S ++ C + + G Q+HA ++ S D S + ++L+++Y++C EA
Sbjct: 443 WPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIW--NALVNLYARCGRIREA 500
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
FE + E D ++WN L+SG+ Q+G
Sbjct: 501 FSSFE---------------------------------EIEHKDEITWNGLVSGFAQSGL 527
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
EE LK+F+RM ++GV+ N TF SALSA L +K K+IH+ V+K G V +
Sbjct: 528 HEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNA 587
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
++ +Y KC G+ E+A+ F ++E+N V W
Sbjct: 588 LISLYGKC-------------------------------GSFEDAKMEFSEMSERNEVSW 616
Query: 360 -TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
T + S + EAL DL + + KEG+ + + + +L AC+ + G +Y
Sbjct: 617 NTIITSCSQHGRGLEAL-DLFDQ-MKKEGIKPNDVTFIGVLAACSHVGLVEEGL---SYF 671
Query: 419 LRM----GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGH 473
M G++ + ++D++ + G + A+ + I D +++ +++ H +
Sbjct: 672 KSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKN 731
Query: 474 EEKAILLFEEMLEKGIKP-DAVTFVAILSAF 503
E + +LE ++P D+ ++V + +A+
Sbjct: 732 IEVGEFAAKHLLE--LEPHDSASYVLLSNAY 760
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 145/332 (43%), Gaps = 34/332 (10%)
Query: 224 AVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCG-LRNVKCAKEIH 282
A S ++G++ + D + L LF FA AL AC G R + EIH
Sbjct: 6 AASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIH 65
Query: 283 SWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNME 342
+ + GL V + ++D+Y K G +
Sbjct: 66 AKAVTRGLGKYRIVGNLLIDLYSK-------------------------------NGLVL 94
Query: 343 EARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGAC 402
ARR F+ L+ ++ V W A+ SGY + E L + + + GVV +L +L +C
Sbjct: 95 PARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQ-MHRAGVVPTPYVLSSVLSSC 153
Query: 403 ALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYN 462
G+ IHA + G + + + ++ +Y +CG+ AE +F + RD V +N
Sbjct: 154 TKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFN 213
Query: 463 VMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTAD 522
+I+ +A GH E A+ +FEEM G+ PD VT ++L+A G ++ G + +S
Sbjct: 214 TLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQ-LHSYLFK 272
Query: 523 YKISPETDHYACMIDLYGRANQLEKAIEFMKS 554
IS + ++DLY + +E A+ S
Sbjct: 273 AGISSDYIMEGSLLDLYVKCGDVETALVIFNS 304
>gi|356568696|ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 194/623 (31%), Positives = 307/623 (49%), Gaps = 80/623 (12%)
Query: 54 RNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIE 113
+++F +I+A L A ++F+ PH ++ YNS++ + + + + F +
Sbjct: 51 QDLFVAPKLIAAFSLCRHLASAVNVFNHVPHPNVHLYNSIIRAHAHNSSHRSLPFNAFFQ 110
Query: 114 MQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKC 173
MQ + D FT L C ++ R +HA + K F +SLID YS+C
Sbjct: 111 MQK--NGLFPDNFTYPFLLKACSGPSSLPLVRMIHAHVEKIGFYGDIFVPNSLIDSYSRC 168
Query: 174 RCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISG 233
NA + +G M + L E D V+WN++I G
Sbjct: 169 ---------------------GNAGL-----DGAMSLFLAM-----EERDVVTWNSMIGG 197
Query: 234 YVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISN 293
V+ G+ + KLF M + +++ SW
Sbjct: 198 LVRCGELQGACKLFDEMPD--------------------------RDMVSW--------- 222
Query: 294 PFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
+ ++D Y K M+ A + RN S S+M+ GYS G+M+ AR FD
Sbjct: 223 ----NTMLDGYAKAGEMDTAFELFERMPWRNIVSWSTMVCGYSKGGDMDMARMLFDRCPV 278
Query: 354 KNVVVWTALFSGYVK---AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHP 410
KNVV+WT + +GY + A+ L+ + E G+ D L+ +L ACA L
Sbjct: 279 KNVVLWTTIIAGYAEKGLAREATELYGKMEE----AGMRPDDGFLLSILAACAESGMLGL 334
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFI-ERDLVLYNVMIACYA 469
GK IHA + R + K+++ +DMY+KCG + A +F + ++D+V +N MI +A
Sbjct: 335 GKRIHASMRRWRFRCGAKVLNAFIDMYAKCGCLDAAFDVFSGMMAKKDVVSWNSMIQGFA 394
Query: 470 HHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPET 529
HGH EKA+ LF M+++G +PD TFV +L A H G V G KYF SM Y I P+
Sbjct: 395 MHGHGEKALELFSWMVQEGFEPDTYTFVGLLCACTHAGLVNEGRKYFYSMEKVYGIVPQV 454
Query: 530 DHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLR 589
+HY CM+DL GR L++A ++S+P E +A+ILG+ LN CR++ + +LA E+L +
Sbjct: 455 EHYGCMMDLLGRGGHLKEAFMLLRSMPMEPNAIILGTLLNACRMHNDVDLARAVCEQLFK 514
Query: 590 LEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDV 649
LE ++ Y L+N+YA G+W + +R QM+ G + +G S + VE E+H FTV D
Sbjct: 515 LEPSDPGNYSLLSNIYAQAGDWMNVANVRLQMKNTGGEKPSGASSIEVEEEVHEFTVFDQ 574
Query: 650 SHPKTNAIYSVLAIFTGELYEIA 672
SHPK++ IY ++ +L ++
Sbjct: 575 SHPKSDDIYQMIDRLVQDLRQVG 597
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 118/228 (51%), Gaps = 6/228 (2%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
++ N ++ Y+K + + +LF+ MP RN+ SW+T++ K D+ AR LFD P K
Sbjct: 220 VSWNTMLDGYAKAGEMDTAFELFERMPWRNIVSWSTMVCGYSKGGDMDMARMLFDRCPVK 279
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR 145
++V + +++ GY +G +A +L+ +M+ A +R D+ + S L C + +G G+
Sbjct: 280 NVVLWTTIIAGYAE-KGLAREATELYGKMEEAG--MRPDDGFLLSILAACAESGMLGLGK 336
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
++HA M + +++ IDMY+KC C + A VF G + +++S N+M+
Sbjct: 337 RIHASMRRWRFRCGAKVLNAFIDMYAKCGCLDAAFDVFSGMMAKKDVVSWNSMIQGFAMH 396
Query: 206 GEMEMALKTF-WRQPE--LNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
G E AL+ F W E D ++ L+ G EG K F M
Sbjct: 397 GHGEKALELFSWMVQEGFEPDTYTFVGLLCACTHAGLVNEGRKYFYSM 444
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 135/579 (23%), Positives = 231/579 (39%), Gaps = 119/579 (20%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
NL H Q +KA L +LI +S L + +F+ +P NV +N+II
Sbjct: 33 NLDSVNQIHAQVLKANLHQDLFVAPKLIAAFSLCRHLASAVNVFNHVPHPNVHLYNSIIR 92
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
A +H+ S H+ L +N+ F +MQ + D
Sbjct: 93 A--HAHN----------SSHRSL-PFNA------------------FFQMQK--NGLFPD 119
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKC--RCYEEACRV 182
FT L C ++ R +HA + K F +SLID YS+C + A +
Sbjct: 120 NFTYPFLLKACSGPSSLPLVRMIHAHVEKIGFYGDIFVPNSLIDSYSRCGNAGLDGAMSL 179
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
F EE ++++ N+M+ R GE++ A K F P+ D VSWNT++ GY + G+ +
Sbjct: 180 FLA-MEERDVVTWNSMIGGLVRCGELQGACKLFDEMPD-RDMVSWNTMLDGYAKAGEMDT 237
Query: 243 GLKLFVRMG-ENGVRWN----------EHTFASALSACCGLRNVKCAKEIHSWVLKNGLI 291
+LF RM N V W+ + A L C ++NV I + + GL
Sbjct: 238 AFELFERMPWRNIVSWSTMVCGYSKGGDMDMARMLFDRCPVKNVVLWTTIIAGYAEKGL- 296
Query: 292 SNPFVSSGIVDVYCKCENMNY--------------AESMLLLKGVRNSFS---------- 327
+ ++Y K E AES +L G R S
Sbjct: 297 -----AREATELYGKMEEAGMRPDDGFLLSILAACAESGMLGLGKRIHASMRRWRFRCGA 351
Query: 328 --ISSMIVGYSLQGNMEEARRHFDS-LTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVT 384
+++ I Y+ G ++ A F + +K+VV W ++ G+ + E +L S ++
Sbjct: 352 KVLNAFIDMYAKCGCLDAAFDVFSGMMAKKDVVSWNSMIQGFAMHGHGEKALELFS-WMV 410
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
+EG D V LL AC HA ++ G +K ++ +Y +
Sbjct: 411 QEGFEPDTYTFVGLLCACT-----------HAGLVNEG----RKYFYSMEKVYGIVPQVE 455
Query: 445 YAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR 504
+ Y M+ GH ++A +L M ++P+A+ +L+A R
Sbjct: 456 H---------------YGCMMDLLGRGGHLKEAFMLLRSM---PMEPNAIILGTLLNACR 497
Query: 505 HCGSVEMGEKYFNSMTADYKISP-ETDHYACMIDLYGRA 542
V++ + +K+ P + +Y+ + ++Y +A
Sbjct: 498 MHNDVDLARAVCEQL---FKLEPSDPGNYSLLSNIYAQA 533
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 60/114 (52%), Gaps = 5/114 (4%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSK--HNLLRESRKLFDEMPERNVFSWN 60
SL L + HV+ I G N LI YS+ + L + LF M ER+V +WN
Sbjct: 135 SLPLVRMIHAHVEKI--GFYGDIFVPNSLIDSYSRCGNAGLDGAMSLFLAMEERDVVTWN 192
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
++I ++ +L+ A LFD P +D+V++N+ML GY A G A +LF M
Sbjct: 193 SMIGGLVRCGELQGACKLFDEMPDRDMVSWNTMLDGYAKA-GEMDTAFELFERM 245
>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g47840-like [Cucumis
sativus]
Length = 712
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 176/607 (28%), Positives = 303/607 (49%), Gaps = 68/607 (11%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
+VF + ++ +K ++ ++ +FD P ++ VT+ +++ G + A GY L F M
Sbjct: 150 SVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRA-GYSEAGLAYFSGM 208
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
+ + D + L + GR +H +K D + F +SL MY+KC
Sbjct: 209 GRSK--VEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKC- 265
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
G+++ L TF R+ D VSW T+++ Y
Sbjct: 266 -------------------------------GKLDYGLHTF-RKMRTLDVVSWTTIVTAY 293
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
+Q G + GL+ F RM + V NE+TF++ +S C +K +++H+ VL G ++
Sbjct: 294 IQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNAL 353
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
V++ I+ +Y KC G + + F S+ +
Sbjct: 354 SVANSIMTLYSKC-------------------------------GELASVSKVFCSMKFR 382
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
+++ W+ + + Y + E F+ LS + EG + L +L C A L GK++
Sbjct: 383 DIITWSTIIAAYSQVGYGEEAFEYLSR-MRSEGPKPNEFALASVLSVCGSMAILEQGKQL 441
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
HA++L +G++ + S L+ MY+KCG++ A IF + + D++ + MI+ YA HGH
Sbjct: 442 HAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHS 501
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC 534
++AI LFE + + G++PD+VTF+ +L+A H G V++G YFNSM+ DY I+P +HY C
Sbjct: 502 QEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGC 561
Query: 535 MIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNN 594
MIDL RA +L A ++S+P + D V+ + L CR++ + + A ++L+L+ N
Sbjct: 562 MIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDPNC 621
Query: 595 KARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKT 654
++ LAN++AA+G W E IR M+ + G S V V+ + F GD SHP+
Sbjct: 622 AGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSVKVKDSVFAFVSGDRSHPQG 681
Query: 655 NAIYSVL 661
IY++L
Sbjct: 682 EDIYNIL 688
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 126/509 (24%), Positives = 231/509 (45%), Gaps = 77/509 (15%)
Query: 10 LICHVQAIKAGLTLTTI----TTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
++C+ Q +K T+ + T + H+Y+K L + +++ ++ N +
Sbjct: 2 VLCYRQHVKRNFTVLAVAGAKTNDNPRHLYTKPLSLTLNAHFSNKV---DLAEANNQLKI 58
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
+K++ LK AR LFD P +D V++ +++ GY+N+ ++AL+LF +M+ E +R+D
Sbjct: 59 LVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSD-SSEALRLFSKMRLQSE-LRIDP 116
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
F ++ L C LN +G LH F VK S F S+L+DMY K +C+VF+
Sbjct: 117 FLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFD- 175
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
EM + +AV+W +I+G V+ G +E GL
Sbjct: 176 -----------------------EMPTR---------NAVTWTAVITGLVRAGYSEAGLA 203
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
F MG + V ++ + +A AL A + + IH+ LK G N FV++ + +Y
Sbjct: 204 YFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYN 263
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
KC ++Y F + +VV WT + +
Sbjct: 264 KCGKLDY-------------------------------GLHTFRKMRTLDVVSWTTIVTA 292
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
Y++ + + V+ + ++ CA A L G+++HA++L +G
Sbjct: 293 YIQMGKEDCGLQAFKR-MRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVN 351
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
+ ++++ +YSKCG + +F + RD++ ++ +IA Y+ G+ E+A M
Sbjct: 352 ALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMR 411
Query: 486 EKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
+G KP+ ++LS CGS+ + E+
Sbjct: 412 SEGPKPNEFALASVLSV---CGSMAILEQ 437
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 193/596 (32%), Positives = 294/596 (49%), Gaps = 68/596 (11%)
Query: 56 VFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQ 115
+ S II+AC + + AR +FD P +D+ +N+++ GY +A E +AL L+ M
Sbjct: 62 LLSTKLIITACCLAPTMDYARKMFDQMPKRDVFLWNTLIRGYADAGPCE-EALALYSNMH 120
Query: 116 SADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRC 175
A + D +T + C L + G+++H +VK D+ F SSL+ MYS+
Sbjct: 121 GAG--LFPDNYTFPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQ--- 175
Query: 176 YEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYV 235
G T + L+ GEM + + VSW +I+GYV
Sbjct: 176 --------SGETLGMELVF-----------GEMV-----------VRNIVSWTAVIAGYV 205
Query: 236 QNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF 295
QN +EGL +F M +G + N T S L AC GL + K IH + +K G+ +
Sbjct: 206 QNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVS 265
Query: 296 VSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKN 355
+++ ++ +Y KC GN+E AR FD + +N
Sbjct: 266 LTNALIALYGKC-------------------------------GNVETARSLFDGMVVQN 294
Query: 356 VVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIH 415
+V W A+ + Y + N A L + E V D + +V ++ ACA AL+ G+ +H
Sbjct: 295 LVSWNAMIAAY-EQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMH 353
Query: 416 AYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEE 475
+ R G++++ + + L+DMY+KCGN+ A +F+ R +V + MI A HGH E
Sbjct: 354 ELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGE 413
Query: 476 KAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACM 535
A+ LF M ++G+KP++ TF A+ +A RH G VE G K+F SM DY I P +H ACM
Sbjct: 414 DALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACM 473
Query: 536 IDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNK 595
+DL GRA L +A EF+ +P E D + G+ L CR++ N ELA EKL L+
Sbjct: 474 VDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHSNLELAELVAEKLFLLDPQTV 533
Query: 596 ARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSH 651
YV ++N+YA G W + R+RK M + + G S V V H F G S
Sbjct: 534 TFYVLMSNIYAEAGRWEDAARLRKLMEERELKKIPGHSLVEVNRRFHTFLSGSRSQ 589
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/498 (21%), Positives = 197/498 (39%), Gaps = 103/498 (20%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L+E H +K G + L+ +YS+ +F EM RN+ SW +I+
Sbjct: 144 LREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAG 203
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
+++ K+ +F +++V G + +A+
Sbjct: 204 YVQNRYFKEGLGVF-----REMV-----------GSGTQPNAV----------------- 230
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
T+ S L C L + G+ +H + +K D ++LI +Y KC E A +F+G
Sbjct: 231 -TLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDG 289
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
+ NL+S NAM+AA Y QN +K
Sbjct: 290 MVVQ-NLVSWNAMIAA--------------------------------YEQNNAGANAVK 316
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
LF RM V ++ T S +SAC L + + +H V + GL N +++ ++D+Y
Sbjct: 317 LFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYA 376
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
KC GN++ AR F+ L ++VV WT++
Sbjct: 377 KC-------------------------------GNIDLAREVFERLPCRSVVSWTSMIGA 405
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR-MGVQ 424
+ E L S + EGV ++ + AC + G++ ++R +
Sbjct: 406 CASHGHGEDALKLFSR-MKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFESMMRDYSIM 464
Query: 425 MDKKLISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
+ + +VD+ + G++ A E I + +E D+ ++ ++ H + E A L+ E+
Sbjct: 465 PGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHSNLELAELVAEK 524
Query: 484 MLEKGIKPDAVTFVAILS 501
+ + P VTF ++S
Sbjct: 525 LFL--LDPQTVTFYVLMS 540
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 197/661 (29%), Positives = 324/661 (49%), Gaps = 81/661 (12%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISAC- 66
EA+ C IK+ + ++T ++ + + N L +++ + F W+ +S
Sbjct: 280 EAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVR---FGWDQFVSVAN 336
Query: 67 ------IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
+K+ + AR +F DL+++N+++ G + G E +L+LFI++ +
Sbjct: 337 SAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARS-GLEECSLRLFIDLLRSG-- 393
Query: 121 IRMDEFTVTSTLNLCVKLL-NVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
+ D+FT+TS L C L + GRQ+H +K F ++LID+YSK
Sbjct: 394 LLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSK------- 446
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
G+ME A F Q D SWN ++ G+ + +
Sbjct: 447 -------------------------GGKMEEAELLFHNQDGF-DLASWNAMMHGFTVSDN 480
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
E L+LF M E G + ++ TFA+A A L ++ K+IH+ V+K + FV SG
Sbjct: 481 YREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISG 540
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
I+D+Y KC G M+ AR+ F+ + + V W
Sbjct: 541 ILDMYLKC-------------------------------GEMKSARKVFNQIPSPDDVAW 569
Query: 360 TALFSGYVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
T + SG V+ + +ALF + GV D L+ AC+L AL GK+IHA I
Sbjct: 570 TTVISGCVENGEEEQALFTYHQ--MRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANI 627
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
+++ D ++++LVDMY+KCGN+ A +F+ R + L+N MI A HG+ E+A+
Sbjct: 628 MKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEAL 687
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
F EM +G+ PD VTF+ +LSA H G K F+SM Y + PE +HY+C++D
Sbjct: 688 NFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDA 747
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARY 598
RA +++A + + S+P E A + + LN CR+ + E EKL ++ ++ A Y
Sbjct: 748 LSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSAAY 807
Query: 599 VQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
V L+N+YAA W R M+ + + G SW+ +++++H+F GD SH +T+ IY
Sbjct: 808 VLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSHEETDLIY 867
Query: 659 S 659
+
Sbjct: 868 N 868
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 152/604 (25%), Positives = 254/604 (42%), Gaps = 129/604 (21%)
Query: 16 AIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIK------- 68
A+K GL L++IY+K +RE+R LFD MP R+V WN ++ A ++
Sbjct: 148 AVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEV 207
Query: 69 --------------------------------SHDLKQARS----LFDSSPHKDLVTYNS 92
+L+Q R+ LF D+ +N
Sbjct: 208 LGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNK 267
Query: 93 MLCGYINA-EGYEA-DALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAF 150
L Y+ A EG+EA D + I+ + D T L++ L ++ G+Q+H
Sbjct: 268 TLSSYLQAGEGWEAVDCFRDMIK-----SRVPCDSLTYIVILSVVASLNHLELGKQIHGA 322
Query: 151 MVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEM 210
+V+ D +S I+MY K A R+F G +EV+LIS N +++ C R G E
Sbjct: 323 VVRFGWDQFVSVANSAINMYVKAGSVNYARRMF-GQMKEVDLISWNTVISGCARSGLEEC 381
Query: 211 ALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACC 270
+ L+LF+ + +G+ ++ T S L AC
Sbjct: 382 S--------------------------------LRLFIDLLRSGLLPDQFTITSVLRACS 409
Query: 271 GLRNVKC-AKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSIS 329
L C +++H+ LK G++ + FVS+ ++DVY K M AE LL ++ F ++
Sbjct: 410 SLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAE---LLFHNQDGFDLA 466
Query: 330 S---MIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKE 386
S M+ G+++ N EA R F + E+ F+ KA C
Sbjct: 467 SWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGC-------------- 512
Query: 387 GVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYA 446
L GK+IHA +++M D +IS ++DMY KCG M A
Sbjct: 513 ------------------LVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSA 554
Query: 447 EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHC 506
+F D V + +I+ +G EE+A+ + +M G++PD TF ++ A
Sbjct: 555 RKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLL 614
Query: 507 GSVEMGEK-YFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE----DA 561
++E G++ + N M + P ++D+Y + +E A + + T +A
Sbjct: 615 TALEQGKQIHANIMKLNCAFDPFV--MTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNA 672
Query: 562 VILG 565
+I+G
Sbjct: 673 MIVG 676
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 139/601 (23%), Positives = 257/601 (42%), Gaps = 98/601 (16%)
Query: 52 PERNVFSWNTIISACIKSHDLKQARSLFDSSPH--KDLVTYNSMLCGYIN-AEGYEAD-- 106
P+R V N +I+ K L AR LFD +P +DLVTYN++L Y + E ++ +
Sbjct: 46 PDRYVT--NNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKT 103
Query: 107 --ALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVS 164
A +F ++ + + T++ LC+ + L + VK F
Sbjct: 104 HEAFHIFRLLRQS--VMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAG 161
Query: 165 SLIDMYSKCRCYEEACRVFE--------------------GCTEEV----NLISKNAMVA 200
+L+++Y+K + EA +F+ G +EV + ++ +
Sbjct: 162 ALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRP 221
Query: 201 ACC--REGEMEMALKT-FWRQPEL--------------NDAVSWNTLISGYVQNGDAEEG 243
C R M + KT F R+ E +D WN +S Y+Q G+ E
Sbjct: 222 DCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEA 281
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
+ F M ++ V + T+ LS L +++ K+IH V++ G V++ +++
Sbjct: 282 VDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINM 341
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y K ++NYA RR F + E +++ W +
Sbjct: 342 YVKAGSVNYA-------------------------------RRMFGQMKEVDLISWNTVI 370
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACA-LQAALHPGKEIHAYILRMG 422
SG ++ E L + + + G++ D + +L AC+ L+ + G+++H L+ G
Sbjct: 371 SGCARSGLEECSLRLFIDLL-RSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAG 429
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
+ +D + + L+D+YSK G M AE++F N DL +N M+ + + +A+ LF
Sbjct: 430 IVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFS 489
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRA 542
M E+G K D +TF A ++ G K +++ + + + ++D+Y +
Sbjct: 490 LMHERGEKADQITFANAAKAAGCLVRLQQG-KQIHAVVIKMRFHYDLFVISGILDMYLKC 548
Query: 543 NQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKL-----LRLEGNNKAR 597
+++ A + IP+ +D V + ++ C N GE E+ L +RL G
Sbjct: 549 GEMKSARKVFNQIPSPDD-VAWTTVISGCVEN------GEEEQALFTYHQMRLAGVQPDE 601
Query: 598 Y 598
Y
Sbjct: 602 Y 602
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 101/455 (22%), Positives = 187/455 (41%), Gaps = 81/455 (17%)
Query: 143 FGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE-EVNLISKNAMVAA 201
G++ HA +V + + + ++LI MY+KC A ++F+ + + +L++ NA++AA
Sbjct: 31 LGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAA 90
Query: 202 CCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHT 261
GE+ KT E +F + ++ + HT
Sbjct: 91 YAHTGELHDVEKT--------------------------HEAFHIFRLLRQSVMLTTRHT 124
Query: 262 FASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKG 321
+ C + ++ + + +K GL + FV+ +V++Y K + + A +
Sbjct: 125 LSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMP 184
Query: 322 VRNSFSISSMIVGYSLQG---------------------------------------NME 342
VR+ + M+ Y G +E
Sbjct: 185 VRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELE 244
Query: 343 EARRHFDSL----TEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVIL 398
+ R + L + +V VW S Y++A D + + K V D+L +++
Sbjct: 245 QVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMI-KSRVPCDSLTYIVI 303
Query: 399 LGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDL 458
L A L GK+IH ++R G + ++ ++MY K G++ YA +F E DL
Sbjct: 304 LSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDL 363
Query: 459 VLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKY--- 515
+ +N +I+ A G EE ++ LF ++L G+ PD T ++L R C S+E E Y
Sbjct: 364 ISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVL---RACSSLE--ESYCVG 418
Query: 516 FNSMTADYKISPETDHY--ACMIDLYGRANQLEKA 548
T K D + +ID+Y + ++E+A
Sbjct: 419 RQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEA 453
>gi|297596789|ref|NP_001043072.2| Os01g0374200 [Oryza sativa Japonica Group]
gi|255673241|dbj|BAF04986.2| Os01g0374200 [Oryza sativa Japonica Group]
Length = 629
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 192/653 (29%), Positives = 316/653 (48%), Gaps = 102/653 (15%)
Query: 9 ALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIK 68
AL C + + + + + T L+++Y K ++ ++R++FD MP+RN FSW+T+++
Sbjct: 35 ALACKIPSAVSNVYVCT----SLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAA 90
Query: 69 SHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
++A LF +L +E +++ EF
Sbjct: 91 EKCSEEAFDLF-----------------------------RLMLEECPSEK----SEFVA 117
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE 188
T+ L+ L + G Q+H +VK +SL+ MY+K C A VFE +
Sbjct: 118 TAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFES-SR 176
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
E N I+ +AM I+GY QNG+A+ + +F
Sbjct: 177 ERNSITWSAM--------------------------------ITGYAQNGEADSAVSMFS 204
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
+M G E TF L+A L + K+ H ++K G +V S +VD+Y KC
Sbjct: 205 QMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKC- 263
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
G + +A+ FD L E ++V+WTA+ SG+V+
Sbjct: 264 ------------------------------GCIADAKEGFDQLYEVDIVLWTAMVSGHVQ 293
Query: 369 AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK 428
E L + + KEG++ + L ACA AAL PGK++H I++ G+ +
Sbjct: 294 NGEHEEALTLYAR-MDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAP 352
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
+ S L MYSKCGN+ +F+ +RD++ +N +I+ ++ +G A+ LFEEM +G
Sbjct: 353 VGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEG 412
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
PD +TF+ IL A H G V+ G +YF+ MT DY ++P DHYACM+D+ RA L++A
Sbjct: 413 TIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEA 472
Query: 549 IEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAE 608
+F++SI + + L CR R+ ++ A E+L+ L + + Y+ L+N+YA++
Sbjct: 473 KDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTGDSSAYILLSNIYASQ 532
Query: 609 GNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
W ++ R+R MR N+ GCSWV + +H+F VG+ HP+ I + L
Sbjct: 533 RKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPEAENINAQL 585
>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
Length = 1241
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 187/602 (31%), Positives = 302/602 (50%), Gaps = 68/602 (11%)
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
++++ KS ++ A+ +FD K++ N+M+ +I G DAL L+ +M++ +
Sbjct: 689 SLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFI-GNGRAYDALGLYNKMKAGETP 747
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
+ D FT++S L+ C + + FGR +HA ++K S ++ S+L+ MY KC E+A
Sbjct: 748 V--DSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDAD 805
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
VF E D V+W ++I+G+ QN
Sbjct: 806 SVFYTMKER---------------------------------DVVAWGSMIAGFCQNRRF 832
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
++ L LF M + GV+ + S +SA GL NV+ IH + +K GL S+ FV+ +
Sbjct: 833 KDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSL 892
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
VD+Y K +AES A F S+ KN+V W
Sbjct: 893 VDMYSK---FGFAES----------------------------AEMVFSSMPNKNLVAWN 921
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
++ S Y E +LL + + + G D++ + +L A + AAL GK +HAY +R
Sbjct: 922 SMISCYSWNGLPEMSINLLPQ-ILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIR 980
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
+ + D ++ + L+DMY KCG + YA++IF+N R+LV +N MIA Y HG+ E+A+ L
Sbjct: 981 LQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRL 1040
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
F+EM PD VTF+A++++ H G VE G F M +Y + P +HYA ++DL G
Sbjct: 1041 FKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLG 1100
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQ 600
RA +L+ A F++ +P + D + L CR +RN EL + LL++E + YV
Sbjct: 1101 RAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAHRNMELGELVADNLLKMEPARGSNYVP 1160
Query: 601 LANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSV 660
L N+Y W +R M+G + GCSW+ V++ + +F GD S + IY
Sbjct: 1161 LLNLYGEVEMWDRAANLRASMKGRGLKKSPGCSWIEVKNRVDVFFSGDSSSTRRIEIYKT 1220
Query: 661 LA 662
L+
Sbjct: 1221 LS 1222
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 138/622 (22%), Positives = 258/622 (41%), Gaps = 133/622 (21%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
NL H + GL LI++Y K LL + ++FD+M E
Sbjct: 456 NLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESR--------- 506
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
DS+P D+ +N ++ GY +E + L F MQ + IR D
Sbjct: 507 ---------------DSAP--DITVWNPVIDGYFKYGHFE-EGLAQFCRMQ--ELGIRPD 546
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
++++ L +C +L GRQ+H ++++ + + ++LI MYS C EA +F
Sbjct: 547 GYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFG 606
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
N++ +WN +I G+V+NG E+ L
Sbjct: 607 KLENRSNIV--------------------------------AWNVMIGGFVENGMWEKSL 634
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
+L+ + +F A +AC + +++H V+K +P+V + ++ +Y
Sbjct: 635 ELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMY 694
Query: 305 CKCENMNYAESM---LLLKGVR--------------------------------NSFSIS 329
K ++ A+ + +L K V +SF+IS
Sbjct: 695 AKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTIS 754
Query: 330 SMIVGYSLQ-----------------------------------GNMEEARRHFDSLTEK 354
S++ G S+ G+ E+A F ++ E+
Sbjct: 755 SLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKER 814
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
+VV W ++ +G+ + + + DL + KEGV D+ ++ ++ A + G I
Sbjct: 815 DVVAWGSMIAGFCQNRRFKDALDLFRA-MEKEGVKADSDVMTSVISAGLGLENVELGHLI 873
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
H + ++ G++ D + +LVDMYSK G AE++F + ++LV +N MI+CY+ +G
Sbjct: 874 HGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLP 933
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC 534
E +I L ++L+ G D+V+ +L A ++ G K ++ +I +
Sbjct: 934 EMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKG-KTLHAYQIRLQIPSDLQVENA 992
Query: 535 MIDLYGRANQLEKAIEFMKSIP 556
+ID+Y + L+ A +++P
Sbjct: 993 LIDMYVKCGCLKYAQLIFENMP 1014
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 152/336 (45%), Gaps = 41/336 (12%)
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL 290
I VQ G + L+L + + + + TF S L C L N+ + IH+ ++ GL
Sbjct: 413 IKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGL 472
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQ--GNMEEARRHF 348
S+P++++ ++++Y KC ++G +LQ M E+R
Sbjct: 473 QSDPYIATSLINMYVKCG-----------------------LLGSALQVFDKMSESRD-- 507
Query: 349 DSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKE--GVVTDALILVILLGACALQA 406
+ ++ VW + GY K + E + L++F + G+ D L I+LG C +
Sbjct: 508 ---SAPDITVWNPVIDGYFKYGHFE---EGLAQFCRMQELGIRPDGYSLSIVLGICNRLS 561
Query: 407 ALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER-DLVLYNVMI 465
G++IH YI+R + D L + L+ MYS C A +F R ++V +NVMI
Sbjct: 562 WYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMI 621
Query: 466 ACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKI 525
+ +G EK++ L+ + K + +F +A H ++ G + + K+
Sbjct: 622 GGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVI---KM 678
Query: 526 SPETDHYAC--MIDLYGRANQLEKAIEFMKSIPTEE 559
+ + D Y C ++ +Y ++ +E A + + +E
Sbjct: 679 NFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKE 714
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 5/107 (4%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H I+ + N LI +Y K L+ ++ +F+ MP RN+ +WN++I+ +
Sbjct: 975 HAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNC 1034
Query: 73 KQARSLFD----SSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQ 115
++A LF S D VT+ +++ + G + L LF M+
Sbjct: 1035 EEAVRLFKEMKRSETAPDEVTFLALITS-CSHSGMVEEGLNLFQLMR 1080
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 305 bits (780), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 180/592 (30%), Positives = 306/592 (51%), Gaps = 66/592 (11%)
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
DL A +F+ P ++ VT+ M+ + GY +A+ LF++M + D FT++
Sbjct: 220 DLVSAFKVFEKMPERNAVTWTLMITRLMQF-GYAGEAIDLFLDMIFSG--YEPDRFTLSG 276
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
++ C + + G+QLH+ ++ LI+MY+KC
Sbjct: 277 VISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSV--------------- 321
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD-AEEGLKLFVR 249
+G M A K F Q ++ SW +I+GYVQ G EE L LF
Sbjct: 322 --------------DGSMCAARKIF-DQILDHNVFSWTAMITGYVQKGGYDEEALDLFRG 366
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
M V N TF+S L AC L ++ +++ + +K G S V++ ++ +Y +
Sbjct: 367 MILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYAR--- 423
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
G +++AR+ FD L EKN++ + + Y K
Sbjct: 424 ----------------------------SGRIDDARKAFDILFEKNLISYNTVIDAYAKN 455
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
N E +L +E + +G+ A LL A + G++IHA +++ G+++++ +
Sbjct: 456 LNSEEALELFNE-IEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSV 514
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+ L+ MYS+CGN+ A +F++ +R+++ + +I +A HG +A+ LF +MLE+G+
Sbjct: 515 CNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGV 574
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
+P+ VT++A+LSA H G V G K+F SM ++ + P +HYAC++D+ GR+ L +AI
Sbjct: 575 RPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAI 634
Query: 550 EFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEG 609
+F+ S+P + DA++ +FL CR++ N EL A + ++ E ++ A Y+ L+N+YA+
Sbjct: 635 QFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASIS 694
Query: 610 NWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
W E+ IRK M+ + AGCSWV VE+++H F VGD SHPK IY L
Sbjct: 695 KWDEVSNIRKAMKEKXLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDEL 746
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 132/560 (23%), Positives = 241/560 (43%), Gaps = 103/560 (18%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEM-PERNVFSW 59
+R+ + + H + ++ L L ++T N LI +YSK ++ +F M R++ SW
Sbjct: 77 IRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISW 136
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
+ ++S C ++++ + L+T+ M+ GY +
Sbjct: 137 SAMVS-CFANNNMG----------FRALLTFVDMI-----ENGYYPN------------- 167
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVS-SLIDMYSKCRCYEE 178
E+ + C V G + F++KT S V LIDM+ K R
Sbjct: 168 -----EYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGR---- 218
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
G++ A K F + PE N AV+W +I+ +Q G
Sbjct: 219 ---------------------------GDLVSAFKVFEKMPERN-AVTWTLMITRLMQFG 250
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
A E + LF+ M +G + T + +SAC + + +++HS +++GL + V
Sbjct: 251 YAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGC 310
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
++++Y KC S+ G+M AR+ FD + + NV
Sbjct: 311 CLINMYAKC----------------------------SVDGSMCAARKIFDQILDHNVFS 342
Query: 359 WTALFSGYV-KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
WTA+ +GYV K E DL + V+ + L ACA AAL G+++ +
Sbjct: 343 WTAMITGYVQKGGYDEEALDLFRGMILTH-VIPNHFTFSSTLKACANLAALRIGEQVFTH 401
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
+++G + ++L+ MY++ G + A F E++L+ YN +I YA + + E+A
Sbjct: 402 AVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEA 461
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC--M 535
+ LF E+ ++G+ A TF ++LS G++ GE+ + K + + C +
Sbjct: 462 LELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVI---KSGLKLNQSVCNAL 518
Query: 536 IDLYGRANQLEKAIEFMKSI 555
I +Y R +E A + + +
Sbjct: 519 ISMYSRCGNIESAFQVFEDM 538
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 116/469 (24%), Positives = 204/469 (43%), Gaps = 105/469 (22%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNL---LRESRKLFDEMPERNVFSWNTIISACIKS 69
H QAI+ GLTL LI++Y+K ++ + +RK+FD++ + NVFSW
Sbjct: 294 HSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWT--------- 344
Query: 70 HDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVT 129
+M+ GY+ GY+ +AL LF M H+ + FT +
Sbjct: 345 ----------------------AMITGYVQKGGYDEEALDLFRGMILT--HVIPNHFTFS 380
Query: 130 STLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEE 189
STL C L + G Q+ VK + +SLI MY+
Sbjct: 381 STLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYA------------------ 422
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
R G ++ A K F E N +S+NT+I Y +N ++EE L+LF
Sbjct: 423 --------------RSGRIDDARKAFDILFEKN-LISYNTVIDAYAKNLNSEEALELFNE 467
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
+ + G+ + TFAS LS + + ++IH+ V+K+GL N V + ++ +Y +C
Sbjct: 468 IEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRC-- 525
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
GN+E A + F+ + ++NV+ WT++ +G+ K
Sbjct: 526 -----------------------------GNIESAFQVFEDMEDRNVISWTSIITGFAKH 556
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG-KEIHAYILRMGVQMDKK 428
+L + + +EGV + + + +L AC+ ++ G K + GV +
Sbjct: 557 GFATQALELFHKML-EEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRME 615
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFI--ERDLVLYNVMIACYAHHGHEE 475
+ +VD+ + G+++ A I F N + + D +++ + HG+ E
Sbjct: 616 HYACIVDILGRSGSLSEA-IQFINSMPYKADALVWRTFLGACRVHGNLE 663
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 147/315 (46%), Gaps = 72/315 (22%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
+ +L + E + H A+K G + N LI +Y++ + ++RK FD + E+N+ S+N
Sbjct: 389 LAALRIGEQVFTH--AVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYN 446
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
T+I A K+ +N+E +AL+LF E++ D+
Sbjct: 447 TVIDAYAKN----------------------------LNSE----EALELFNEIE--DQG 472
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
+ FT S L+ + +G G Q+HA ++K+ + ++LI MYS+C E A
Sbjct: 473 MGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAF 532
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+VFE E+ N+I SW ++I+G+ ++G A
Sbjct: 533 QVFED-MEDRNVI--------------------------------SWTSIITGFAKHGFA 559
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSAC--CGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
+ L+LF +M E GVR NE T+ + LSAC GL N + K S ++G+I +
Sbjct: 560 TQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVN-EGWKHFKSMYTEHGVIPRMEHYA 618
Query: 299 GIVDVYCKCENMNYA 313
IVD+ + +++ A
Sbjct: 619 CIVDILGRSGSLSEA 633
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 121/263 (46%), Gaps = 18/263 (6%)
Query: 381 EFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC 440
E + +G D + L C + G +H + + +Q+D +++L+ +YSKC
Sbjct: 55 EHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKC 114
Query: 441 GNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
G A IF+ RDL+ ++ M++C+A++ +A+L F +M+E G P+ F A
Sbjct: 115 GQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAA 174
Query: 500 LSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY--GRANQLEKAIEFMKSIPT 557
A V +G+ F + + + +ID++ GR + L A + + +P
Sbjct: 175 TRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGD-LVSAFKVFEKMP- 232
Query: 558 EEDAVILGSFLNVCRLNRNAELAGEAEEKLLRL--EGNNKARYVQLANVYAAEGNWAEMG 615
E +AV L + RL + AGEA + L + G R+ L+ V +A N E+
Sbjct: 233 ERNAVTWT--LMITRLMQFG-YAGEAIDLFLDMIFSGYEPDRFT-LSGVISACAN-MELL 287
Query: 616 RIRKQM------RGMKGNRFAGC 632
+ +Q+ G+ +R GC
Sbjct: 288 LLGQQLHSQAIRHGLTLDRCVGC 310
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 305 bits (780), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 190/625 (30%), Positives = 321/625 (51%), Gaps = 61/625 (9%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
++ F+ N +++ K + +++LF+S +D+V++N+M+ + ++ + ++AL F
Sbjct: 228 DQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRF-SEALAFFR 286
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSND--ASGFAVSSLIDMY 170
M E + +D T+ S L C L + G+++HA++++ +ND + F S+L+DMY
Sbjct: 287 LM--VLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLR-NNDLIENSFVGSALVDMY 343
Query: 171 SKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTL 230
CR E RVF+ R+ EL WN +
Sbjct: 344 CNCRQVESGRRVFD----------------------------HILGRRIEL-----WNAM 370
Query: 231 ISGYVQNGDAEEGLKLFVRMGE-NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG 289
ISGY +NG E+ L LF+ M + G+ N T AS + AC + IH + +K G
Sbjct: 371 ISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLG 430
Query: 290 LISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFD 349
+ +V + ++D+Y + M+ +E++ VR+ S ++MI GY L G R+ +
Sbjct: 431 FKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSG------RYSN 484
Query: 350 SLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALH 409
+L L + +N + + ++ +A+ L+ +L CA AA+
Sbjct: 485 ALV---------LLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIA 535
Query: 410 PGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYA 469
GKEIHAY +R + D + S LVDMY+KCG + + +F ++++ +NV+I
Sbjct: 536 KGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACG 595
Query: 470 HHGHEEKAILLFEEMLEKG-----IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYK 524
HG E+A+ LF+ M+ + KP+ VTF+ + +A H G + G F M D+
Sbjct: 596 MHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHG 655
Query: 525 ISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAV-ILGSFLNVCRLNRNAELAGEA 583
+ P +DHYAC++DL GRA QLE+A E + ++P E D V S L CR+++N EL A
Sbjct: 656 VEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVA 715
Query: 584 EEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHI 643
+ LL LE N + YV L+N+Y++ G W + +RK MR M + GCSW+ E+H
Sbjct: 716 AKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHK 775
Query: 644 FTVGDVSHPKTNAIYSVLAIFTGEL 668
F GDVSHP++ ++ L + ++
Sbjct: 776 FMAGDVSHPQSEQLHGFLETLSEKM 800
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 115/472 (24%), Positives = 211/472 (44%), Gaps = 76/472 (16%)
Query: 81 SSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLN 140
+SP + ++ L + + +A+ +IEM + R D F + L L +
Sbjct: 51 TSPSRSTASWVDALRSRTRSNDFR-EAISTYIEMTVSGA--RPDNFAFPAVLKAVSGLQD 107
Query: 141 VGFGRQLHAFMVKTSNDASGFAVS-SLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMV 199
+ G Q+HA VK +S V+ +L++MY KC + C+VF+ T+ + +S N+ +
Sbjct: 108 LKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDR-DQVSWNSFI 166
Query: 200 AACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNE 259
AA CR + E AL+ F N +S TL+S
Sbjct: 167 AALCRFEKWEQALEAFRAMQMENMELSSFTLVS--------------------------- 199
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLL 319
A A S + ++ K++H + L+
Sbjct: 200 --VALACSNLGVMHGLRLGKQLHGYSLR-------------------------------- 225
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN-CEALFDL 378
G + +F+ ++++ Y+ G +++++ F+S ++++V W + S + ++ EAL
Sbjct: 226 VGDQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEAL--A 283
Query: 379 LSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI-STLVDMY 437
+ EGV D + + +L AC+ L GKEIHAY+LR ++ + S LVDMY
Sbjct: 284 FFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMY 343
Query: 438 SKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE-KGIKPDAVTF 496
C + +F + + R + L+N MI+ YA +G +EKA++LF EM++ G+ P+ T
Sbjct: 344 CNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTM 403
Query: 497 VAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA--CMIDLYGRANQLE 546
+++ A HC + E K+ + D Y ++D+Y R +++
Sbjct: 404 ASVMPACVHCEAFSNKESIHGYAV---KLGFKEDRYVQNALMDMYSRMGKMD 452
>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 182/603 (30%), Positives = 313/603 (51%), Gaps = 68/603 (11%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
+VF +++++ K + +AR LFD P ++LV++ +M+ GY + + +AL +F M
Sbjct: 146 DVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISGYASKQ-MAKEALGVFGLM 204
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
+ + + ++EF TS L+ V V G+Q+H +VK +++L+ MY+KC
Sbjct: 205 RLVEGN--LNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVLEFVSVLNALVTMYAKCG 262
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
+ +FE C+++ +A++W+ LI+GY
Sbjct: 263 NLNYSLMLFEMCSDK---------------------------------NAITWSALITGY 289
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
Q GD+ + LKLF +M G +E T L AC + ++ K+ H ++LK+G +
Sbjct: 290 SQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQI 349
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
+ ++ +VD+Y K G +AR+ FD L E
Sbjct: 350 YTATALVDMYAKF-------------------------------GFTGDARKGFDFLLEP 378
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
++V+WT++ +GYV+ E + ++ ++ + L + +L AC+ AAL GK+I
Sbjct: 379 DLVLWTSIIAGYVQNGKNEEALSMYGRMQMRK-ILPNELTMASVLKACSNLAALEQGKQI 437
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
HA ++ G+ + + S L MY+KCG++ +IF+ ++RD+V +N MI+ + +GH
Sbjct: 438 HARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMISGLSQNGHG 497
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC 534
+A+ LFEEM +G KPD +TFV +LSA H G V+ G YFN M ++ + P +HYAC
Sbjct: 498 REALELFEEMRLEGTKPDHITFVTVLSACSHMGIVKRGWAYFNMMFDEFCLVPRVEHYAC 557
Query: 535 MIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNN 594
M+D+ RA +L +A EF++S + + L CR + N EL A EKL+ L
Sbjct: 558 MVDVLSRAGKLNEAKEFIESAIIDHGMCLWRILLPACRNHCNYELGAYAGEKLMELGSRE 617
Query: 595 KARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKT 654
+ YV L+++Y A G A++ R+R+ M+ + GCSW+ ++ +H+F VGD HP+
Sbjct: 618 SSAYVLLSSIYTAMGRLADVVRVRRMMKVRGVRKETGCSWIELKSHVHVFVVGDQIHPQI 677
Query: 655 NAI 657
I
Sbjct: 678 EEI 680
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 187/663 (28%), Positives = 320/663 (48%), Gaps = 105/663 (15%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
LK H + + AG T L+ +Y+K ++ R++F+++ R++ +WNT+I
Sbjct: 243 LKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMI-- 300
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
G + GY +A +++ +MQ E + ++
Sbjct: 301 ------------------------------GGLAEGGYWEEASEVYNQMQR--EGVMPNK 328
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
T LN CV + +G+++H+ + K + ++LI MYS+C ++A VF+
Sbjct: 329 ITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFD- 387
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
++ K D +SW +I G ++G E L
Sbjct: 388 -----KMVRK---------------------------DVISWTAMIGGLAKSGFGAEALT 415
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
++ M + GV N T+ S L+AC ++ + IH V++ GL ++ V + +V++Y
Sbjct: 416 VYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYS 475
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
C G++++AR+ FD + ++++V + A+ G
Sbjct: 476 MC-------------------------------GSVKDARQVFDRMIQRDIVAYNAMIGG 504
Query: 366 YVK---AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
Y + LFD L E EG+ D + + +L ACA +L +EIH + + G
Sbjct: 505 YAAHNLGKEALKLFDRLQE----EGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGG 560
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
D + + LV Y+KCG+ + A I+F+ +R+++ +N +I A HG + A+ LFE
Sbjct: 561 FFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFE 620
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRA 542
M +G+KPD VTFV++LSA H G +E G +YF SM+ D+ I P +HY CM+DL GRA
Sbjct: 621 RMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRA 680
Query: 543 NQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLA 602
QL++A +K++P + + I G+ L CR++ N +A A E L+L+ +N YV L+
Sbjct: 681 GQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVALS 740
Query: 603 NVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLA 662
++YAA G W ++RK M + G SW+ V ++H F D SHP++ IY+ L
Sbjct: 741 HMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYAELD 800
Query: 663 IFT 665
T
Sbjct: 801 RLT 803
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/417 (26%), Positives = 201/417 (48%), Gaps = 64/417 (15%)
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L C+++ ++ GRQ+H +++ + V++LI+MY +C EEA +V++ +
Sbjct: 30 LKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKLSY--- 86
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
ME + SWN ++ GY+Q G E+ LKL +M
Sbjct: 87 ----------------MERTVH------------SWNAMVVGYIQYGYIEKALKLLRQMQ 118
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
++G+ + T S LS+C ++ +EIH ++ GL+ + V++ I+++Y KC
Sbjct: 119 QHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKC---- 174
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
G++EEAR FD + +K+VV WT GY
Sbjct: 175 ---------------------------GSIEEAREVFDKMEKKSVVSWTITIGGYADCGR 207
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
E F++ + + +EGVV + + + +L A + AAL GK +H+ IL G + D + +
Sbjct: 208 SETAFEIFQK-MEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGT 266
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
LV MY+KCG+ +F+ + RDL+ +N MI A G+ E+A ++ +M +G+ P
Sbjct: 267 ALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMP 326
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
+ +T+V +L+A + ++ G K +S A + + +I +Y R ++ A
Sbjct: 327 NKITYVILLNACVNSAALHWG-KEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDA 382
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 132/264 (50%), Gaps = 34/264 (12%)
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
+ G + N + L C ++++ +++H ++++ + + + + ++++Y +C
Sbjct: 16 QQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQC---- 71
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT--EKNVVVWTALFSGYVKA 369
G++EEAR+ + L+ E+ V W A+ GY++
Sbjct: 72 ---------------------------GSIEEARQVWKKLSYMERTVHSWNAMVVGYIQY 104
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
E LL + + + G+ D ++ L +C AL G+EIH ++ G+ D K+
Sbjct: 105 GYIEKALKLLRQ-MQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKV 163
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+ +++MY+KCG++ A +F ++ +V + + I YA G E A +F++M ++G+
Sbjct: 164 ANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGV 223
Query: 490 KPDAVTFVAILSAFRHCGSVEMGE 513
P+ +T++++L+AF +++ G+
Sbjct: 224 VPNRITYISVLNAFSSPAALKWGK 247
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 130/241 (53%), Gaps = 27/241 (11%)
Query: 381 EFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC 440
+++ ++G ++ + +L C L G+++H +I++ D+ ++ L++MY +C
Sbjct: 12 QYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQC 71
Query: 441 GNMTYAEIIFQ--NFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVA 498
G++ A +++ +++ER + +N M+ Y +G+ EKA+ L +M + G+ PD T ++
Sbjct: 72 GSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMS 131
Query: 499 ILSAFRHCGSVEMG-EKYFNSMTA----DYKISPETDHYACMIDLYGRANQLEKAIEFMK 553
LS+ + G++E G E +F +M A D K++ C++++Y + +E+A E
Sbjct: 132 FLSSCKSPGALEWGREIHFQAMQAGLLFDVKVAN------CILNMYAKCGSIEEAREVFD 185
Query: 554 SIPTEEDAVI-----LGSFLNVCRLNRNAELAGEAEEKLLRLEG--NNKARYVQLANVYA 606
+ E+ +V+ +G + + R +E A E +K+ + EG N+ Y+ + N ++
Sbjct: 186 KM--EKKSVVSWTITIGGYADCGR----SETAFEIFQKMEQ-EGVVPNRITYISVLNAFS 238
Query: 607 A 607
+
Sbjct: 239 S 239
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 101/262 (38%), Gaps = 49/262 (18%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTI 62
S +L+ A H K G T N L+ Y+K ++ +F++M +RNV SWN I
Sbjct: 543 SGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAI 602
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
I S+ H G DAL+LF M+ E ++
Sbjct: 603 IGG---------------SAQH-----------------GRGQDALQLFERMKM--EGVK 628
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV-------SSLIDMYSKCRC 175
D T S L+ C + G + + S D FA+ ++D+ +
Sbjct: 629 PDIVTFVSLLSACS---HAGLLEEGRRYFCSMSQD---FAIIPTIEHYGCMVDLLGRAGQ 682
Query: 176 YEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWR--QPELNDAVSWNTLISG 233
+EA + + + N A++ AC G + +A + + +L++AV + L
Sbjct: 683 LDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVALSHM 742
Query: 234 YVQNGDAEEGLKLFVRMGENGV 255
Y G + KL M + GV
Sbjct: 743 YAAAGMWDSAAKLRKLMEQRGV 764
>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
[Vitis vinifera]
Length = 836
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 187/603 (31%), Positives = 302/603 (50%), Gaps = 68/603 (11%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
++++ KS ++ A+ +FD K++ N+M+ +I G DAL L+ +M++ +
Sbjct: 283 TSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFI-GNGRAYDALGLYNKMKAGET 341
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
+ D FT++S L+ C + + FGR +HA ++K S ++ S+L+ MY KC E+A
Sbjct: 342 PV--DSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDA 399
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
VF E D V+W ++I+G+ QN
Sbjct: 400 DSVFYTMKER---------------------------------DVVAWGSMIAGFCQNRR 426
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
++ L LF M + GV+ + S +SA GL NV+ IH + +K GL S+ FV+
Sbjct: 427 FKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACS 486
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
+VD+Y K +AES A F S+ KN+V W
Sbjct: 487 LVDMYSK---FGFAES----------------------------AEMVFSSMPNKNLVAW 515
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
++ S Y E +LL + + + G D++ + +L A + AAL GK +HAY +
Sbjct: 516 NSMISCYSWNGLPEMSINLLPQ-ILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQI 574
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
R+ + D ++ + L+DMY KCG + YA++IF+N R+LV +N MIA Y HG+ E+A+
Sbjct: 575 RLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVR 634
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
LF+EM PD VTF+A++++ H G VE G F M +Y + P +HYA ++DL
Sbjct: 635 LFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLL 694
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYV 599
GRA +L+ A F++ +P + D + L CR +RN EL + LL++E + YV
Sbjct: 695 GRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAHRNMELGELVADNLLKMEPARGSNYV 754
Query: 600 QLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYS 659
L N+Y W +R M+G + GCSW+ V++ + +F GD S + IY
Sbjct: 755 PLLNLYGEVEMWDRAANLRASMKGRGLKKSPGCSWIEVKNRVDVFFSGDSSSTRRIEIYK 814
Query: 660 VLA 662
L+
Sbjct: 815 TLS 817
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 137/638 (21%), Positives = 247/638 (38%), Gaps = 161/638 (25%)
Query: 44 SRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGY 103
SRK + S N+ I A ++ QA L +PH L T
Sbjct: 8 SRKFYSLRQTEVSPSINSKIKALVQQGKYSQALELHSKTPHSALTT-------------- 53
Query: 104 EADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV 163
+FT S L C L N+ GR +HA +V + +
Sbjct: 54 --------------------AKFTFPSLLKTCASLSNLYHGRTIHASIVTMGLQSDPYIA 93
Query: 164 SSLIDMYSKCRCYEEACRVFEGCTEE----VNLISKNAMVAACCREGEMEMALKTFWRQP 219
+SLI+MY KC A +VF+ +E ++ N ++ + G E L F R
Sbjct: 94 TSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQ 153
Query: 220 EL---------------------------------------------------NDAVSWN 228
EL ++ V+WN
Sbjct: 154 ELSWYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWN 213
Query: 229 TLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKN 288
+I G+V+NG E+ L+L+ + +F A +AC + +++H V+K
Sbjct: 214 VMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKM 273
Query: 289 GLISNPFVSSGIVDVYCKCENMNYAESM---LLLKGVR---------------------- 323
+P+V + ++ +Y K ++ A+ + +L K V
Sbjct: 274 NFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLY 333
Query: 324 ----------NSFSISSMIVGYSLQ----------------------------------- 338
+SF+ISS++ G S+
Sbjct: 334 NKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKC 393
Query: 339 GNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVIL 398
G+ E+A F ++ E++VV W ++ +G+ + + + DL + KEGV D+ ++ +
Sbjct: 394 GSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRA-MEKEGVKADSDVMTSV 452
Query: 399 LGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDL 458
+ A + G IH + ++ G++ D + +LVDMYSK G AE++F + ++L
Sbjct: 453 ISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNL 512
Query: 459 VLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNS 518
V +N MI+CY+ +G E +I L ++L+ G D+V+ +L A ++ G K ++
Sbjct: 513 VAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKG-KTLHA 571
Query: 519 MTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIP 556
+I + +ID+Y + L+ A +++P
Sbjct: 572 YQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMP 609
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 120/535 (22%), Positives = 212/535 (39%), Gaps = 97/535 (18%)
Query: 112 IEMQSADEH--IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDM 169
+E+ S H + +FT S L C L N+ GR +HA +V + + +SLI+M
Sbjct: 40 LELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINM 99
Query: 170 YSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNT 229
Y KC A +VF+ +E + D WN
Sbjct: 100 YVKCGLLGSALQVFDKMSES----------------------------RDSAPDITVWNP 131
Query: 230 LISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG 289
+I GY + G EEGL F RM E + W ++IH ++++N
Sbjct: 132 VIDGYFKYGHFEEGLAQFCRMQE--LSW-----------------YMAGRQIHGYIIRNM 172
Query: 290 LISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFD 349
+P++ + ++ +Y C S + +SL G +E
Sbjct: 173 FEGDPYLETALIGMYSSC---------------------SRPMEAWSLFGKLE------- 204
Query: 350 SLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALH 409
N+V W + G+V+ E +L S E + AC+ L
Sbjct: 205 --NRSNIVAWNVMIGGFVENGMWEKSLELYS-LAKNENCKLVSASFTGAFTACSHGEVLD 261
Query: 410 PGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYA 469
G+++H +++M Q D + ++L+ MY+K G++ A+ +F +++++ L N MI+ +
Sbjct: 262 FGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFI 321
Query: 470 HHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMG-----EKYFNSMTADYK 524
+G A+ L+ +M D+ T ++LS GS + G E SM ++
Sbjct: 322 GNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVA 381
Query: 525 ISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAE 584
I + ++ +Y + E A ++ E D V GS + NR + A +
Sbjct: 382 IQ------SALLTMYYKCGSTEDADSVFYTM-KERDVVAWGSMIAGFCQNRRFKDALDLF 434
Query: 585 EKLLRLEGNNKARYVQLANVYAAEG-NWAEMGRIRKQM---RGMKGNRFAGCSWV 635
+ + EG V + + A G E+G + RG++ + F CS V
Sbjct: 435 RAMEK-EGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLV 488
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 111/266 (41%), Gaps = 39/266 (14%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
N++ + H AIK GL L+ +YSK + +F MP +N+ +WN++IS
Sbjct: 461 NVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMIS 520
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
C + L + + + + Q +D
Sbjct: 521 -CYSWNGLPE---------------------------------MSINLLPQILQHGFYLD 546
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
++T+ L + + G+ LHA+ ++ + ++LIDMY KC C + A +FE
Sbjct: 547 SVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFE 606
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTF---WRQPELNDAVSWNTLISGYVQNGDAE 241
NL++ N+M+A G E A++ F R D V++ LI+ +G E
Sbjct: 607 NMPRR-NLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVE 665
Query: 242 EGLKLFVRMG-ENGVRWNEHTFASAL 266
EGL LF M E GV +AS +
Sbjct: 666 EGLNLFQLMRIEYGVEPRMEHYASVV 691
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 193/658 (29%), Positives = 334/658 (50%), Gaps = 22/658 (3%)
Query: 28 TNQLIHIYSKHNLLRESRKLF--DEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP-- 83
T +LIH+Y+ L + LF D P S ++++A + L A S FD+ P
Sbjct: 62 TLRLIHLYTLSRDLPAAATLFCADPCP----VSATSLVAAYAAADRLPAAVSFFDAVPPA 117
Query: 84 HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGF 143
+D V +N+++ Y A + A A+ +F + ++ +R D+++ T+ L+ L N+
Sbjct: 118 RRDTVLHNAVISAYARAS-HAAPAVAVFRSLLASGS-LRPDDYSFTALLSAGGHLPNISV 175
Query: 144 GR--QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYE---EACRVFEGCTEEVNLISKNAM 198
QLH ++K+ + ++L+ +Y KC E +A +V + + +L + M
Sbjct: 176 RHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPEATRDARKVLDEMPNKDDL-TWTTM 234
Query: 199 VAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWN 258
V R G++ A F D V WN +ISGYV +G A E +LF RM V +
Sbjct: 235 VVGYVRRGDVGAARSVFEEVDGKFDVV-WNAMISGYVHSGMAVEAFELFRRMVLERVPLD 293
Query: 259 EHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP----FVSSGIVDVYCKCENMNYAE 314
E TF S LSAC + K +H +++ P V++ +V Y KC N+ A
Sbjct: 294 EFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVAR 353
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEA 374
+ +++ S ++++ GY +++A F+ + KN + W + SGYV E
Sbjct: 354 RIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAED 413
Query: 375 LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLV 434
L ++ + E V + AC AL GK++H +I+++G + + L+
Sbjct: 414 ALKLFNK-MRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALI 472
Query: 435 DMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAV 494
MY++CG + A ++F D V +N MI+ HGH +A+ LF+ M+ +GI PD +
Sbjct: 473 TMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRI 532
Query: 495 TFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKS 554
+F+ +L+A H G V+ G +YF SM D+ I P DHY +IDL GRA ++ +A + +K+
Sbjct: 533 SFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKT 592
Query: 555 IPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEM 614
+P E I + L+ CR + + EL A ++L ++ + Y+ L+N Y+A G W +
Sbjct: 593 MPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGCWVDA 652
Query: 615 GRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
R+RK MR + GCSW+ +++H+F VGD HP+ + +Y L + ++ ++
Sbjct: 653 ARVRKLMRDRGVKKEPGCSWIEAGNKVHVFLVGDTKHPEAHEVYKFLEMVGAKMRKLG 710
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 6/146 (4%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
LK H ++ G + N LI +Y++ ++E+ +F MP + SWN +ISA
Sbjct: 446 LKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISA 505
Query: 66 CIKSHDLKQARSLFD----SSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+ ++A LFD + D +++ ++L N G + + F M+ D I
Sbjct: 506 LGQHGHGREALELFDRMVAEGIYPDRISFLTVLTA-CNHSGLVDEGFRYFESMKR-DFGI 563
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQL 147
E T ++L + +G R L
Sbjct: 564 IPGEDHYTRLIDLLGRAGRIGEARDL 589
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 188/671 (28%), Positives = 319/671 (47%), Gaps = 100/671 (14%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTI 62
S N++ H ++ G T N L+ +Y K + + +F++MP+ +V SWN +
Sbjct: 215 SRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNAL 274
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
IS C+ G++ A++L ++M+ + +
Sbjct: 275 ISGCV--------------------------------LNGHDHRAIELLLQMKYSG--LV 300
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
+ FT++S L C GRQ+H FM+K + D+ + L+DMY+K ++A +V
Sbjct: 301 PNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKV 360
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
F+ +LI NA+++ C G +E
Sbjct: 361 FDWMFHR-DLILCNALISGCS--------------------------------HGGRHDE 387
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
L LF + + G+ N T A+ L + L +++H+ +K G I + V +G++D
Sbjct: 388 ALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLID 447
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
Y KC ++ +A R F+ + +++ T++
Sbjct: 448 SYWKCSCLS-------------------------------DANRVFEECSSGDIIACTSM 476
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
+ + + E L E + K G+ D +L LL ACA +A GK++HA++++
Sbjct: 477 ITALSQCDHGEGAIKLFMEMLRK-GLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQ 535
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
D + LV Y+KCG++ AE+ F + ER +V ++ MI A HGH ++A+ LF
Sbjct: 536 FMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFG 595
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRA 542
M+++GI P+ +T ++L A H G V+ ++YFNSM + I +HY+CMIDL GRA
Sbjct: 596 RMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRA 655
Query: 543 NQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLA 602
+L+ A+E + S+P + +A I G+ L R++++ EL A EKL LE +V LA
Sbjct: 656 GKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLA 715
Query: 603 NVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLA 662
N YA+ G W E+ ++RK M+ + SW+ V+ ++H F VGD SHP T IY+ L
Sbjct: 716 NTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKL- 774
Query: 663 IFTGELYEIAG 673
+ G+L AG
Sbjct: 775 VELGDLMSKAG 785
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 137/547 (25%), Positives = 235/547 (42%), Gaps = 105/547 (19%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEM-PERNVFSWNTIISACIKSHD 71
H A+ G N L+ +Y + ++R++F+E ERN SWN ++SA +K+
Sbjct: 123 HAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQ 182
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
CG DA+++F EM + I+ EF +
Sbjct: 183 -----------------------CG---------DAIQVFGEMVWSG--IQPTEFGFSCV 208
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
+N C N+ GRQ+HA +V+ D F ++L+DMY K + A +FE
Sbjct: 209 VNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFE------- 261
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
+ P+ +D VSWN LISG V NG ++L ++M
Sbjct: 262 -------------------------KMPD-SDVVSWNALISGCVLNGHDHRAIELLLQMK 295
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
+G+ N T +S L AC G ++IH +++K S+ ++ G+VD+Y K
Sbjct: 296 YSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAK----- 350
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
N F +++AR+ FD + +++++ AL SG
Sbjct: 351 ------------NHF--------------LDDARKVFDWMFHRDLILCNALISGCSHGGR 384
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
+ L E + KEG+ + L +L + A A +++HA +++G D +++
Sbjct: 385 HDEALSLFYE-LRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVN 443
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
L+D Y KC ++ A +F+ D++ MI + H E AI LF EML KG++P
Sbjct: 444 GLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEP 503
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA--CMIDLYGRANQLEKAI 549
D ++L+A + E G++ + +S D +A ++ Y + +E A
Sbjct: 504 DPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMS---DAFAGNALVYTYAKCGSIEDAE 560
Query: 550 EFMKSIP 556
S+P
Sbjct: 561 LAFSSLP 567
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 198/428 (46%), Gaps = 70/428 (16%)
Query: 75 ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNL 134
AR +FD P V+++S++ Y N G A++ F M++ E + +EF + L
Sbjct: 56 ARRVFDEIPDPCHVSWSSLVTAYSN-NGLPRSAIQAFHGMRA--EGVCCNEFALPVVLK- 111
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
CV + G Q+HA + T + F ++L+ MY ++A RVF E N
Sbjct: 112 CVP--DARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERN--- 166
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
AVSWN L+S YV+N + +++F M +G
Sbjct: 167 -----------------------------AVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG 197
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
++ E F+ ++AC G RN++ +++H+ V++ G + F ++ +VD+Y K ++
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVD--- 254
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEA 374
I+S+I F+ + + +VV W AL SG V +
Sbjct: 255 -------------IASVI---------------FEKMPDSDVVSWNALISGCVLNGHDHR 286
Query: 375 LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLV 434
+LL + + G+V + L +L AC+ A G++IH ++++ D + LV
Sbjct: 287 AIELLLQ-MKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLV 345
Query: 435 DMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAV 494
DMY+K + A +F RDL+L N +I+ +H G ++A+ LF E+ ++G+ +
Sbjct: 346 DMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRT 405
Query: 495 TFVAILSA 502
T A+L +
Sbjct: 406 TLAAVLKS 413
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 106/234 (45%), Gaps = 11/234 (4%)
Query: 344 ARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF--VTKEGVVTDALILVILLGA 401
ARR FD + + V W++L + Y N + F + EGV + L ++L
Sbjct: 56 ARRVFDEIPDPCHVSWSSLVTAY---SNNGLPRSAIQAFHGMRAEGVCCNEFALPVVL-K 111
Query: 402 CALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVL 460
C A L G ++HA + G D + + LV MY G M A +F ER+ V
Sbjct: 112 CVPDARL--GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVS 169
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
+N +++ Y + AI +F EM+ GI+P F +++A ++E G + ++M
Sbjct: 170 WNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQ-VHAMV 228
Query: 521 ADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLN 574
+ ++D+Y + +++ A + +P + D V + ++ C LN
Sbjct: 229 VRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMP-DSDVVSWNALISGCVLN 281
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 189/619 (30%), Positives = 306/619 (49%), Gaps = 70/619 (11%)
Query: 58 SWNTIISACIKSHDL-KQARSLFDSSPHKDLVT--YNSMLCGYINAEGYEADALKLFIEM 114
S+++++ A S L A SLF P L T YN ++ +++A G+ DAL LFIEM
Sbjct: 51 SFHSLLEAAAASPTLLPYAVSLFRLGPRPPLSTPCYNVLMRAFLHA-GHPEDALHLFIEM 109
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
A D+ T L C ++ + GR + A+ VK A F +SSLI MY+ C
Sbjct: 110 LHAASACPADQHTAACALKSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCG 169
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
A VF+ E + V WN +++ Y
Sbjct: 170 DVAAARLVFDAAEE---------------------------------SGVVMWNAIVAAY 196
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
++NGD E +++F M E GV ++E T S ++AC + + K K + V + GL NP
Sbjct: 197 LKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNP 256
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
+ + ++D+Y KC G + +ARR FD + +
Sbjct: 257 KLVTALMDMYAKC-------------------------------GEIGKARRLFDGMQSR 285
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
+VV W+A+ SGY +A C L SE V + + +V +L ACA+ AL GK +
Sbjct: 286 DVVAWSAMISGYTQADQCREALGLFSEMQLAR-VEPNDVTMVSVLSACAVLGALETGKWV 344
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
H+Y+ R + + L + LVD Y+KCG + A F++ ++ + +I A +G
Sbjct: 345 HSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRG 404
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC 534
+A+ LF M E GI+P VTF+ +L A H VE G ++F+SM DY I P +HY C
Sbjct: 405 REALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGC 464
Query: 535 MIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNN 594
M+DL GRA +++A +F++++P E +AVI + L+ C ++RN + EA ++++ L ++
Sbjct: 465 MVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALKQIISLNPSH 524
Query: 595 KARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKT 654
YV L+N+YA+ G W + +RK+M+ + GCS + ++ + F D HP+
Sbjct: 525 SGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKTPGCSLIELDGVVFEFFAEDSDHPEL 584
Query: 655 NAIYSVLAIFTGELYEIAG 673
IY + G + ++AG
Sbjct: 585 REIYQKVEEMIGRI-KVAG 602
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 113/489 (23%), Positives = 196/489 (40%), Gaps = 91/489 (18%)
Query: 16 AIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQA 75
A+K GL + LIH+Y+ + +R +FD E V WN I++A +K+ D +
Sbjct: 146 AVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEV 205
Query: 76 RSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLC 135
+F K +E+ A DE T+ S + C
Sbjct: 206 VEMF-----------------------------KGMLEVGVA-----FDEVTLVSVVTAC 231
Query: 136 VKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISK 195
++ + G+ + + + + V++L+DMY+KC +A R+F+G
Sbjct: 232 GRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGM--------- 282
Query: 196 NAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGV 255
+ D V+W+ +ISGY Q E L LF M V
Sbjct: 283 ------------------------QSRDVVAWSAMISGYTQADQCREALGLFSEMQLARV 318
Query: 256 RWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAES 315
N+ T S LSAC L ++ K +HS+V + L + + +VD Y KC ++ A
Sbjct: 319 EPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVE 378
Query: 316 MLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEAL 375
V+NS++ +++I G + G EA F S+ E + F G + A + L
Sbjct: 379 AFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCL 438
Query: 376 -------FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK 428
FD ++ + V +V LLG L E + +I M ++ +
Sbjct: 439 VEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLV------DEAYQFIRTMPIEPNAV 492
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERD-------LVLYNVMIACYAHHGHEEKAILLF 481
+ L+ + N+ E + I + ++L N+ YA G + A ++
Sbjct: 493 IWRALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNI----YASAGQWKDAAMVR 548
Query: 482 EEMLEKGIK 490
+EM ++GI+
Sbjct: 549 KEMKDRGIE 557
>gi|125525985|gb|EAY74099.1| hypothetical protein OsI_01984 [Oryza sativa Indica Group]
Length = 735
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 192/653 (29%), Positives = 316/653 (48%), Gaps = 102/653 (15%)
Query: 9 ALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIK 68
AL C + + + + + T L+++Y K ++ ++R++FD MP+RN FSW+T+++
Sbjct: 141 ALACKIPSAVSNVYVCT----SLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAA 196
Query: 69 SHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
++A LF +L +E +++ EF
Sbjct: 197 EKCSEEAFDLF-----------------------------RLMLEECPSEK----SEFVA 223
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE 188
T+ L+ L + G Q+H +VK +SL+ MY+K C A VFE +
Sbjct: 224 TAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFES-SR 282
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
E N I+ +AM I+GY QNG+A+ + +F
Sbjct: 283 ERNSITWSAM--------------------------------ITGYAQNGEADSAVSMFS 310
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
+M G E TF L+A L + K+ H ++K G +V S +VD+Y KC
Sbjct: 311 QMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKC- 369
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
G + +A+ FD L E ++V+WTA+ SG+V+
Sbjct: 370 ------------------------------GCIADAKEGFDQLYEVDIVLWTAMVSGHVQ 399
Query: 369 AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK 428
E L + + KEG++ + L ACA AAL PGK++H I++ G+ +
Sbjct: 400 NGEHEEALTLYAR-MDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAP 458
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
+ S L MYSKCGN+ +F+ +RD++ +N +I+ ++ +G A+ LFEEM +G
Sbjct: 459 VGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEG 518
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
PD +TF+ IL A H G V+ G +YF+ MT DY ++P DHYACM+D+ RA L++A
Sbjct: 519 TIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEA 578
Query: 549 IEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAE 608
+F++SI + + L CR R+ ++ A E+L+ L + + Y+ L+N+YA++
Sbjct: 579 KDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTRDSSAYILLSNIYASQ 638
Query: 609 GNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
W ++ R+R MR N+ GCSWV + +H+F VG+ HP+ I + L
Sbjct: 639 RKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPEAENINAQL 691
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 133/569 (23%), Positives = 226/569 (39%), Gaps = 110/569 (19%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYS--KHNLLRESRKLFDEMPE--RNVFSWNTIISACIK 68
H A+K+G N LI+ YS LL + +FD++P R+V SWN++++
Sbjct: 35 HAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVASWNSLLNPL-- 92
Query: 69 SHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
S H+ L DAL F M S+ + +
Sbjct: 93 -------------SRHRPL------------------DALSRFRSMLSSST-VLPSPHSF 120
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASG-FAVSSLIDMYSKCRCYEEACRVFEGCT 187
+ + + G HA K + S + +SL++MY K +A R+F+G
Sbjct: 121 AAAFTAAARAASAPAGTAAHALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRMFDG-- 178
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
P+ N + SW+T+++GY +EE LF
Sbjct: 179 ------------------------------MPQRN-SFSWSTMVAGYAAEKCSEEAFDLF 207
Query: 248 VRMGENGVRWNEHTFASA-LSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
M E A+A LSA + +++H ++K+GL+ V + +V +Y K
Sbjct: 208 RLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAK 267
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
M A + RNS + S+MI GY+ G + A ++FS
Sbjct: 268 AGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSA---------------VSMFSQM 312
Query: 367 VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMD 426
A G V +L A + AL GK+ H ++++G ++
Sbjct: 313 HAA-----------------GFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQ 355
Query: 427 KKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
+ S LVDMY+KCG + A+ F E D+VL+ M++ + +G E+A+ L+ M +
Sbjct: 356 IYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDK 415
Query: 487 KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLE 546
+GI P T + L A ++E G K ++ Y + + + +Y + LE
Sbjct: 416 EGIIPSKSTIASGLRACAGIAALEPG-KQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLE 474
Query: 547 KAIEFMKSIPTEE----DAVILGSFLNVC 571
+ + IP + +++I G N C
Sbjct: 475 DGMSVFRRIPDRDVIAWNSIISGFSQNGC 503
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 188/671 (28%), Positives = 319/671 (47%), Gaps = 100/671 (14%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTI 62
S N++ H ++ G T N L+ +Y K + + +F++MP+ +V SWN +
Sbjct: 215 SRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNAL 274
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
IS C+ G++ A++L ++M+ + +
Sbjct: 275 ISGCV--------------------------------LNGHDHRAIELLLQMKYSG--LV 300
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
+ FT++S L C GRQ+H FM+K + D+ + L+DMY+K ++A +V
Sbjct: 301 PNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKV 360
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
F+ +LI NA+++ C G +E
Sbjct: 361 FDWMFHR-DLILCNALISGCS--------------------------------HGGRHDE 387
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
L LF + + G+ N T A+ L + L +++H+ +K G I + V +G++D
Sbjct: 388 ALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLID 447
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
Y KC ++ +A R F+ + +++ T++
Sbjct: 448 SYWKCSCLS-------------------------------DANRVFEECSSGDIIACTSM 476
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
+ + + E L E + K G+ D +L LL ACA +A GK++HA++++
Sbjct: 477 ITALSQCDHGEGAIKLFMEMLRK-GLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQ 535
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
D + LV Y+KCG++ AE+ F + ER +V ++ MI A HGH ++A+ LF
Sbjct: 536 FMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFG 595
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRA 542
M+++GI P+ +T ++L A H G V+ ++YFNSM + I +HY+CMIDL GRA
Sbjct: 596 RMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRA 655
Query: 543 NQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLA 602
+L+ A+E + S+P + +A I G+ L R++++ EL A EKL LE +V LA
Sbjct: 656 GKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLA 715
Query: 603 NVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLA 662
N YA+ G W E+ ++RK M+ + SW+ V+ ++H F VGD SHP T IY+ L
Sbjct: 716 NTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKL- 774
Query: 663 IFTGELYEIAG 673
+ G+L AG
Sbjct: 775 VELGDLMSKAG 785
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 137/547 (25%), Positives = 235/547 (42%), Gaps = 105/547 (19%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEM-PERNVFSWNTIISACIKSHD 71
H A+ G N L+ +Y + ++R++F+E ERN SWN ++SA +K+
Sbjct: 123 HAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQ 182
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
CG DA+++F EM + I+ EF +
Sbjct: 183 -----------------------CG---------DAIQVFGEMVWSG--IQPTEFGFSCV 208
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
+N C N+ GRQ+HA +V+ D F ++L+DMY K + A +FE
Sbjct: 209 VNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFE------- 261
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
+ P+ +D VSWN LISG V NG ++L ++M
Sbjct: 262 -------------------------KMPD-SDVVSWNALISGCVLNGHDHRAIELLLQMK 295
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
+G+ N T +S L AC G ++IH +++K S+ ++ G+VD+Y K
Sbjct: 296 YSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAK----- 350
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
N F +++AR+ FD + +++++ AL SG
Sbjct: 351 ------------NHF--------------LDDARKVFDWMFHRDLILCNALISGCSHGGR 384
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
+ L E + KEG+ + L +L + A A +++HA +++G D +++
Sbjct: 385 HDEALSLFYE-LRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVN 443
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
L+D Y KC ++ A +F+ D++ MI + H E AI LF EML KG++P
Sbjct: 444 GLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEP 503
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA--CMIDLYGRANQLEKAI 549
D ++L+A + E G++ + +S D +A ++ Y + +E A
Sbjct: 504 DPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMS---DAFAGNALVYTYAKCGSIEDAE 560
Query: 550 EFMKSIP 556
S+P
Sbjct: 561 LAFSSLP 567
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 197/428 (46%), Gaps = 70/428 (16%)
Query: 75 ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNL 134
AR FD P V+++S++ Y N G A++ F M++ E + +EF + L
Sbjct: 56 ARRFFDEIPDPCHVSWSSLVTAYSN-NGLPRSAIQAFHGMRA--EGVCCNEFALPVVLK- 111
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
CV + G Q+HA + T + F ++L+ MY ++A RVF E N
Sbjct: 112 CVP--DARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERN--- 166
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
AVSWN L+S YV+N + +++F M +G
Sbjct: 167 -----------------------------AVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG 197
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
++ E F+ ++AC G RN++ +++H+ V++ G + F ++ +VD+Y K ++
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVD--- 254
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEA 374
I+S+I F+ + + +VV W AL SG V +
Sbjct: 255 -------------IASVI---------------FEKMPDSDVVSWNALISGCVLNGHDHR 286
Query: 375 LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLV 434
+LL + + G+V + L +L AC+ A G++IH ++++ D + LV
Sbjct: 287 AIELLLQ-MKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLV 345
Query: 435 DMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAV 494
DMY+K + A +F RDL+L N +I+ +H G ++A+ LF E+ ++G+ +
Sbjct: 346 DMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRT 405
Query: 495 TFVAILSA 502
T A+L +
Sbjct: 406 TLAAVLKS 413
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 106/234 (45%), Gaps = 11/234 (4%)
Query: 344 ARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF--VTKEGVVTDALILVILLGA 401
ARR FD + + V W++L + Y N + F + EGV + L ++L
Sbjct: 56 ARRFFDEIPDPCHVSWSSLVTAY---SNNGLPRSAIQAFHGMRAEGVCCNEFALPVVL-K 111
Query: 402 CALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVL 460
C A L G ++HA + G D + + LV MY G M A +F ER+ V
Sbjct: 112 CVPDARL--GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVS 169
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
+N +++ Y + AI +F EM+ GI+P F +++A ++E G + ++M
Sbjct: 170 WNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQ-VHAMV 228
Query: 521 ADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLN 574
+ ++D+Y + +++ A + +P + D V + ++ C LN
Sbjct: 229 VRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMP-DSDVVSWNALISGCVLN 281
>gi|356523586|ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 190/620 (30%), Positives = 300/620 (48%), Gaps = 74/620 (11%)
Query: 54 RNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIE 113
+++F +I+A L A ++F+ PH ++ YNS++ + + + + F +
Sbjct: 51 QDLFVAPKLIAAFSLCRHLASAVNVFNHVPHPNVHLYNSIIRAHAHNTSHPSLPFNAFFQ 110
Query: 114 MQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKC 173
MQ + D FT L C ++ R +HA + K F +SLID YS+C
Sbjct: 111 MQK--NGLFPDNFTYPFLLKACTGPSSLPLVRMIHAHVEKFGFYGDIFVPNSLIDSYSRC 168
Query: 174 RCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISG 233
+ +G M + L R D V+WN++I G
Sbjct: 169 --------------------------GSAGLDGAMSLFLAMKER-----DVVTWNSMIGG 197
Query: 234 YVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISN 293
V+ G+ E KLF M E +++ SW
Sbjct: 198 LVRCGELEGACKLFDEMPE--------------------------RDMVSW--------- 222
Query: 294 PFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
+ ++D Y K M+ A + RN S S+M+ GYS G+M+ AR FD
Sbjct: 223 ----NTMLDGYAKAGEMDRAFELFERMPQRNIVSWSTMVCGYSKGGDMDMARVLFDRCPA 278
Query: 354 KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
KNVV+WT + +GY + +L + + + G+ D L+ +L ACA L GK
Sbjct: 279 KNVVLWTTIIAGYAEKGFVREATELYGK-MEEAGLRPDDGFLISILAACAESGMLGLGKR 337
Query: 414 IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFI-ERDLVLYNVMIACYAHHG 472
IHA + R + K+++ +DMY+KCG + A +F + ++D+V +N MI +A HG
Sbjct: 338 IHASMRRWRFRCGTKVLNAFIDMYAKCGCLDAAFDVFSGMMAKKDVVSWNSMIQGFAMHG 397
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
H EKA+ LF M+ +G +PD TFV +L A H G V G KYF SM Y I P+ +HY
Sbjct: 398 HGEKALELFSRMVPEGFEPDTYTFVGLLCACTHAGLVNEGRKYFYSMEKVYGIVPQVEHY 457
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
CM+DL GR L++A ++S+P E +A+ILG+ LN CR++ + + A E+L ++E
Sbjct: 458 GCMMDLLGRGGHLKEAFTLLRSMPMEPNAIILGTLLNACRMHNDVDFARAVCEQLFKVEP 517
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
+ Y L+N+YA G+W + +R QM G + +G S + VE E+H FTV D SHP
Sbjct: 518 TDPGNYSLLSNIYAQAGDWMNVANVRLQMMNTGGQKPSGASSIEVEEEVHEFTVFDQSHP 577
Query: 653 KTNAIYSVLAIFTGELYEIA 672
K++ IY ++ +L ++
Sbjct: 578 KSDDIYKMIDRLVQDLRQVG 597
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 121/228 (53%), Gaps = 6/228 (2%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
++ N ++ Y+K + + +LF+ MP+RN+ SW+T++ K D+ AR LFD P K
Sbjct: 220 VSWNTMLDGYAKAGEMDRAFELFERMPQRNIVSWSTMVCGYSKGGDMDMARVLFDRCPAK 279
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR 145
++V + +++ GY +G+ +A +L+ +M+ A +R D+ + S L C + +G G+
Sbjct: 280 NVVLWTTIIAGYAE-KGFVREATELYGKMEEAG--LRPDDGFLISILAACAESGMLGLGK 336
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
++HA M + +++ IDMY+KC C + A VF G + +++S N+M+
Sbjct: 337 RIHASMRRWRFRCGTKVLNAFIDMYAKCGCLDAAFDVFSGMMAKKDVVSWNSMIQGFAMH 396
Query: 206 GEMEMALKTFWRQ-PE--LNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
G E AL+ F R PE D ++ L+ G EG K F M
Sbjct: 397 GHGEKALELFSRMVPEGFEPDTYTFVGLLCACTHAGLVNEGRKYFYSM 444
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 133/579 (22%), Positives = 221/579 (38%), Gaps = 119/579 (20%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
NL H Q +KA L +LI +S L + +F+ +P NV +N+II
Sbjct: 33 NLDSVNQIHAQVLKANLHQDLFVAPKLIAAFSLCRHLASAVNVFNHVPHPNVHLYNSIIR 92
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
A +H+ F++ F +MQ + D
Sbjct: 93 A--HAHNTSHPSLPFNA-----------------------------FFQMQK--NGLFPD 119
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRC--YEEACRV 182
FT L C ++ R +HA + K F +SLID YS+C + A +
Sbjct: 120 NFTYPFLLKACTGPSSLPLVRMIHAHVEKFGFYGDIFVPNSLIDSYSRCGSAGLDGAMSL 179
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
F E ++++ N+M+ R GE+E A K F PE D VSWNT++ GY + G+ +
Sbjct: 180 FLAMKER-DVVTWNSMIGGLVRCGELEGACKLFDEMPE-RDMVSWNTMLDGYAKAGEMDR 237
Query: 243 GLKLFVRMGE-NGVRWN----------EHTFASALSACCGLRNVKCAKEIHSWVLKNGLI 291
+LF RM + N V W+ + A L C +NV I + + G +
Sbjct: 238 AFELFERMPQRNIVSWSTMVCGYSKGGDMDMARVLFDRCPAKNVVLWTTIIAGYAEKGFV 297
Query: 292 SNPFVSSGIVDVYCKCENMNY--------------AESMLLLKGVRNSFS---------- 327
++Y K E AES +L G R S
Sbjct: 298 RE------ATELYGKMEEAGLRPDDGFLISILAACAESGMLGLGKRIHASMRRWRFRCGT 351
Query: 328 --ISSMIVGYSLQGNMEEARRHFDS-LTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVT 384
+++ I Y+ G ++ A F + +K+VV W ++ G+ + E +L S V
Sbjct: 352 KVLNAFIDMYAKCGCLDAAFDVFSGMMAKKDVVSWNSMIQGFAMHGHGEKALELFSRMVP 411
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
EG D V LL AC HA ++ G +K ++ +Y +
Sbjct: 412 -EGFEPDTYTFVGLLCACT-----------HAGLVNEG----RKYFYSMEKVYGIVPQVE 455
Query: 445 YAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR 504
+ Y M+ GH ++A L M ++P+A+ +L+A R
Sbjct: 456 H---------------YGCMMDLLGRGGHLKEAFTLLRSM---PMEPNAIILGTLLNACR 497
Query: 505 HCGSVEMGEKYFNSMTADYKISP-ETDHYACMIDLYGRA 542
V+ + +K+ P + +Y+ + ++Y +A
Sbjct: 498 MHNDVDFARAVCEQL---FKVEPTDPGNYSLLSNIYAQA 533
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 128/308 (41%), Gaps = 55/308 (17%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSK--HNLLRESRKLFDEMPERNVFSWN 60
SL L + HV+ K G N LI YS+ L + LF M ER+V +WN
Sbjct: 135 SLPLVRMIHAHVE--KFGFYGDIFVPNSLIDSYSRCGSAGLDGAMSLFLAMKERDVVTWN 192
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
++I ++ +L+ A LFD P +D+V++N+ML GY A G A +LF M +
Sbjct: 193 SMIGGLVRCGELEGACKLFDEMPERDMVSWNTMLDGYAKA-GEMDRAFELFERMPQRN-- 249
Query: 121 IRMDEFTVTSTLNLC-------VKLLNVGFGRQLHAFMVKTSNDASGFA----VSSLIDM 169
V+ + +C + + V F R +V + +G+A V ++
Sbjct: 250 ------IVSWSTMVCGYSKGGDMDMARVLFDRCPAKNVVLWTTIIAGYAEKGFVREATEL 303
Query: 170 YSKCRCYEEA---------CRVFEGCTEEVNL-ISK------------------NAMVAA 201
Y K EEA + C E L + K NA +
Sbjct: 304 YGK---MEEAGLRPDDGFLISILAACAESGMLGLGKRIHASMRRWRFRCGTKVLNAFIDM 360
Query: 202 CCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHT 261
+ G ++ A F D VSWN++I G+ +G E+ L+LF RM G + +T
Sbjct: 361 YAKCGCLDAAFDVFSGMMAKKDVVSWNSMIQGFAMHGHGEKALELFSRMVPEGFEPDTYT 420
Query: 262 FASALSAC 269
F L AC
Sbjct: 421 FVGLLCAC 428
>gi|14587213|dbj|BAB61147.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|125570436|gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group]
Length = 735
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 192/653 (29%), Positives = 316/653 (48%), Gaps = 102/653 (15%)
Query: 9 ALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIK 68
AL C + + + + + T L+++Y K ++ ++R++FD MP+RN FSW+T+++
Sbjct: 141 ALACKIPSAVSNVYVCT----SLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAA 196
Query: 69 SHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
++A LF +L +E +++ EF
Sbjct: 197 EKCSEEAFDLF-----------------------------RLMLEECPSEK----SEFVA 223
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE 188
T+ L+ L + G Q+H +VK +SL+ MY+K C A VFE +
Sbjct: 224 TAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFES-SR 282
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
E N I+ +AM I+GY QNG+A+ + +F
Sbjct: 283 ERNSITWSAM--------------------------------ITGYAQNGEADSAVSMFS 310
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
+M G E TF L+A L + K+ H ++K G +V S +VD+Y KC
Sbjct: 311 QMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKC- 369
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
G + +A+ FD L E ++V+WTA+ SG+V+
Sbjct: 370 ------------------------------GCIADAKEGFDQLYEVDIVLWTAMVSGHVQ 399
Query: 369 AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK 428
E L + + KEG++ + L ACA AAL PGK++H I++ G+ +
Sbjct: 400 NGEHEEALTLYAR-MDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAP 458
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
+ S L MYSKCGN+ +F+ +RD++ +N +I+ ++ +G A+ LFEEM +G
Sbjct: 459 VGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEG 518
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
PD +TF+ IL A H G V+ G +YF+ MT DY ++P DHYACM+D+ RA L++A
Sbjct: 519 TIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEA 578
Query: 549 IEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAE 608
+F++SI + + L CR R+ ++ A E+L+ L + + Y+ L+N+YA++
Sbjct: 579 KDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTGDSSAYILLSNIYASQ 638
Query: 609 GNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
W ++ R+R MR N+ GCSWV + +H+F VG+ HP+ I + L
Sbjct: 639 RKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPEAENINAQL 691
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 149/335 (44%), Gaps = 37/335 (11%)
Query: 219 PELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCA 278
P D SWN+L++ + + + + + V + H+FA+A +A +
Sbjct: 77 PAARDVTSWNSLLNPLSGHRPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAG 136
Query: 279 KEIHSWVLK-NGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSL 337
H+ K +SN +V + ++++YCK
Sbjct: 137 TAAHALACKIPSAVSNVYVCTSLLNMYCKL------------------------------ 166
Query: 338 QGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVI 397
G + +ARR FD + ++N W+ + +GY + E FDL + + +
Sbjct: 167 -GIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEECPSEKSEFVATA 225
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD 457
+L A ++ L G+++H I++ G+ + ++LV MY+K G M A +F++ ER+
Sbjct: 226 VLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERN 285
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFN 517
+ ++ MI YA +G + A+ +F +M G P TFV +L+A G++ +G++
Sbjct: 286 SITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHG 345
Query: 518 SMTADYKISPETDHY--ACMIDLYGRANQLEKAIE 550
M K+ E Y + ++D+Y + + A E
Sbjct: 346 LMV---KLGFEVQIYVKSALVDMYAKCGCIADAKE 377
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 200/674 (29%), Positives = 333/674 (49%), Gaps = 82/674 (12%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
M+S +K + + + A + + ++IH ++LR K N N
Sbjct: 477 MQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIH----EDILRSGIK-------SNGHLAN 525
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
+++ + + +A+++F+ + +D++++NSM+ G+ YEA A KLF+EM+ E
Sbjct: 526 ALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEA-AYKLFLEMKK--EG 582
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
+ D+ T S L C + GRQ+H ++++ ++LI+MY +C ++A
Sbjct: 583 LEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAY 642
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
VF +L +N M SW +I G+ G+
Sbjct: 643 EVFH------SLRHRNVM---------------------------SWTAMIGGFADQGED 669
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
+ +LF +M +G + + TF+S L AC + K++ + +L +G
Sbjct: 670 RKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGY---------- 719
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
L GV N+ +I YS G+M +AR+ FD + ++++ W
Sbjct: 720 ----------------ELDTGVGNA-----LISAYSKSGSMTDARKVFDKMPNRDIMSWN 758
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKE-GVVTDALILVILLGACALQAALHPGKEIHAYIL 419
+ +GY AQN L + +E GVV + V +L AC+ +AL GK +HA I+
Sbjct: 759 KMIAGY--AQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIV 816
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
+ +Q D ++ + L+ MY+KCG++ A+ +F NF E+++V +N MI YA HG KA+
Sbjct: 817 KRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALD 876
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
F M ++GIKPD TF +ILSA H G V G + F+S+ + + +SP +HY C++ L
Sbjct: 877 FFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLL 936
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYV 599
GRA + ++A + +P DA + + L CR++ N LA A L+L N A YV
Sbjct: 937 GRAGRFQEAETLINQMPFPPDAAVWETLLGACRIHGNVALAEHAANNALKLNARNPAVYV 996
Query: 600 QLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYS 659
L+NVYAA G W ++ +IR+ M G + G SW+ V++ IH F D SHP+T IY
Sbjct: 997 LLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYE 1056
Query: 660 VLAIFTGELYEIAG 673
L + E+ E AG
Sbjct: 1057 ELKRLSLEM-ERAG 1069
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 125/550 (22%), Positives = 249/550 (45%), Gaps = 75/550 (13%)
Query: 15 QAIKAGLTLTTITTNQLIHIYSKHNLLRESRKL----FDEMPERNVFSWNTIISACIKSH 70
Q G+ +T L+ ++ ++L E +++ +E ++ + + ++
Sbjct: 274 QMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCG 333
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
D+ A+ ++ +D+V YN+++ YE +A + + +M+S + + M+ T S
Sbjct: 334 DVAGAKQALEAFADRDVVVYNALIAALAQHGHYE-EAFEQYYQMRS--DGVVMNRTTYLS 390
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
LN C +G G +H+ + + + + +SLI MY++C
Sbjct: 391 VLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARC----------------- 433
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
G++ A + F P+ D +SWN +I+GY + D E +KL+ +M
Sbjct: 434 ---------------GDLPRARELFNTMPK-RDLISWNAIIAGYARREDRGEAMKLYKQM 477
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
GV+ TF LSAC K IH +L++G+ SN +++ ++++Y +C
Sbjct: 478 QSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRC--- 534
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
G++ EA+ F+ ++++ W ++ +G+ +
Sbjct: 535 ----------------------------GSIMEAQNVFEGTRARDIISWNSMIAGHAQHG 566
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
+ EA + L E + KEG+ D + +L C AL G++IH I+ G+Q+D L
Sbjct: 567 SYEAAYKLFLE-MKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLG 625
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+ L++MY +CG++ A +F + R+++ + MI +A G + KA LF +M G K
Sbjct: 626 NALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFK 685
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYF-NSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
P TF +IL A ++ G+K + + + Y++ +T +I Y ++ + A
Sbjct: 686 PVKSTFSSILKACMSSACLDEGKKVIAHILNSGYEL--DTGVGNALISAYSKSGSMTDAR 743
Query: 550 EFMKSIPTEE 559
+ +P +
Sbjct: 744 KVFDKMPNRD 753
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 143/617 (23%), Positives = 256/617 (41%), Gaps = 142/617 (23%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R +L EA H Q ++AG+ +N LI++Y K + ++ ++F +MP R+V SWN+
Sbjct: 94 RKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNS 153
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+IS + +G++ A +LF EMQ+A
Sbjct: 154 LISCYAQ--------------------------------QGFKKKAFQLFEEMQTAG--F 179
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+ T S L C + +G+++H+ +++ +SL++MY KC A +
Sbjct: 180 IPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQ 239
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
VF G +R+ D VS+NT++ Y Q E
Sbjct: 240 VFSG-----------------------------IYRR----DVVSYNTMLGLYAQKAYVE 266
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E + LF +M G+ ++ T+ + L A + K IH + GL S+ V + +
Sbjct: 267 ECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALA 326
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
++ +C G++ A++ ++ +++VVV+ A
Sbjct: 327 TMFVRC-------------------------------GDVAGAKQALEAFADRDVVVYNA 355
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
L + + + E F+ + + +GVV + + +L AC+ AL G+ IH++I +
Sbjct: 356 LIAALAQHGHYEEAFEQYYQ-MRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEV 414
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
G D ++ ++L+ MY++CG++ A +F +RDL+ +N +IA YA +A+ L+
Sbjct: 415 GHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLY 474
Query: 482 EEMLEKGIKPDAVTFVAILSA-----------------------------------FRHC 506
++M +G+KP VTF+ +LSA +R C
Sbjct: 475 KQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRC 534
Query: 507 GSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF---MKSIPTEEDAVI 563
GS+ + F A IS + MI + + E A + MK E D +
Sbjct: 535 GSIMEAQNVFEGTRARDIIS-----WNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKIT 589
Query: 564 LGSFLNVCRLNRNAELA 580
S L C+ EL
Sbjct: 590 FASVLVGCKNPEALELG 606
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 124/257 (48%), Gaps = 32/257 (12%)
Query: 258 NEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESML 317
N + + C R++ AK IH+ +++ G+ + F+S+ ++++Y KC +++ A +
Sbjct: 81 NRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVF 140
Query: 318 LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFD 377
L + ++V+ W +L S Y + + F
Sbjct: 141 L-------------------------------KMPRRDVISWNSLISCYAQQGFKKKAFQ 169
Query: 378 LLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMY 437
L E T G + + + +L AC A L GK+IH+ I+ G Q D ++ ++L++MY
Sbjct: 170 LFEEMQTA-GFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMY 228
Query: 438 SKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFV 497
KC ++ A +F RD+V YN M+ YA + E+ I LF +M +GI PD VT++
Sbjct: 229 GKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYI 288
Query: 498 AILSAFRHCGSVEMGEK 514
+L AF ++ G++
Sbjct: 289 NLLDAFTTPSMLDEGKR 305
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 91/178 (51%), Gaps = 3/178 (1%)
Query: 379 LSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYS 438
LS T+ V L+ C + +L K IHA ++ GV D L + L++MY
Sbjct: 69 LSNAYQPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYV 128
Query: 439 KCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVA 498
KC +++ A +F RD++ +N +I+CYA G ++KA LFEEM G P +T+++
Sbjct: 129 KCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYIS 188
Query: 499 ILSAFRHCGSVEMGEKYFNSMT-ADYKISPETDHYACMIDLYGRANQLEKAIEFMKSI 555
IL+A +E G+K + + A Y+ P + ++++YG+ L A + I
Sbjct: 189 ILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQN--SLLNMYGKCEDLPSARQVFSGI 244
>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 186/620 (30%), Positives = 325/620 (52%), Gaps = 71/620 (11%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
+V+ N +I+ K ++ A +F S +D V++N++L G + E Y DAL F +M
Sbjct: 282 DVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYR-DALNYFRDM 340
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
Q++ + + D+ +V + + + N+ G+++HA+ ++ D++ ++LIDMY+KC
Sbjct: 341 QNSAQ--KPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCC 398
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
C + FE C E +LIS W T+I+GY
Sbjct: 399 CVKHMGYAFE-CMHEKDLIS--------------------------------WTTIIAGY 425
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
QN E + LF ++ G+ + S L AC GL++ +EIH +V K L ++
Sbjct: 426 AQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL-ADI 484
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
+ + IV+VY + + +YA RR F+S+ K
Sbjct: 485 MLQNAIVNVYGEVGHRDYA-------------------------------RRAFESIRSK 513
Query: 355 NVVVWTALFSGYV-KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
++V WT++ + V EAL S + + + D++ ++ L A A ++L GKE
Sbjct: 514 DIVSWTSMITCCVHNGLPVEALELFYS--LKQTNIQPDSIAIISALSATANLSSLKKGKE 571
Query: 414 IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH 473
IH +++R G ++ + S+LVDMY+ CG + + +F + +RDL+L+ MI HG
Sbjct: 572 IHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGC 631
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA 533
+AI LF++M ++ + PD +TF+A+L A H G + G+++F M Y++ P +HYA
Sbjct: 632 GNEAIALFKKMTDENVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYA 691
Query: 534 CMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGN 593
CM+DL R+N LE+A +F++S+P + + + + L C ++ N EL A ++LL+ +
Sbjct: 692 CMVDLLSRSNSLEEAYQFVRSMPIKPSSEVWCALLGACHIHSNKELGELAAKELLQSDTK 751
Query: 594 NKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPK 653
N +Y ++N++AA+G W ++ +R +M+G + GCSW+ V+++IH F D SHP+
Sbjct: 752 NSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQ 811
Query: 654 TNAIYSVLAIFTGELYEIAG 673
T+ IY LA FT L + G
Sbjct: 812 TDDIYLKLAQFTKLLGKKGG 831
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 139/564 (24%), Positives = 245/564 (43%), Gaps = 114/564 (20%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDE--MPERNVFSWNTIISACIKSH 70
H A+K G N LI +Y K L +R LFD M + + SWN+IISA +
Sbjct: 168 HGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHV--- 224
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
EG +AL LF MQ + + +T +
Sbjct: 225 -----------------------------TEGKCLEALSLFRRMQEVG--VASNTYTFVA 253
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L V G +H +K+++ A + ++LI MY+KC E+A RVF
Sbjct: 254 ALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVF------- 306
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
+ CR D VSWNTL+SG VQN + L F M
Sbjct: 307 --------ASMLCR------------------DYVSWNTLLSGLVQNELYRDALNYFRDM 340
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC--- 307
+ + ++ + + ++A N+ KE+H++ ++NGL SN + + ++D+Y KC
Sbjct: 341 QNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCV 400
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
++M YA F+ + EK+++ WT + +GY
Sbjct: 401 KHMGYA----------------------------------FECMHEKDLISWTTIIAGY- 425
Query: 368 KAQNCEALFDLLSEF--VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
AQN E + ++ F V +G+ D +++ +L AC+ + + +EIH Y+ + +
Sbjct: 426 -AQN-ECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLA- 482
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
D L + +V++Y + G+ YA F++ +D+V + MI C H+G +A+ LF +
Sbjct: 483 DIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLK 542
Query: 486 EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQL 545
+ I+PD++ ++ LSA + S++ G K + E + ++D+Y +
Sbjct: 543 QTNIQPDSIAIISALSATANLSSLKKG-KEIHGFLIRKGFFLEGPIASSLVDMYACCGTV 601
Query: 546 EKAIEFMKSIPTEEDAVILGSFLN 569
E + + S+ + D ++ S +N
Sbjct: 602 ENSRKMFHSV-KQRDLILWTSMIN 624
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 128/483 (26%), Positives = 207/483 (42%), Gaps = 103/483 (21%)
Query: 23 LTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSS 82
L+ +L+H+Y K L+++ K+FDEM ER +F+WN ++ A + S
Sbjct: 77 LSAFLATKLLHMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVSS------------- 123
Query: 83 PHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVG 142
G +A++L+ EM+ + +D T S L C L
Sbjct: 124 -------------------GKYLEAIELYKEMRVLG--VAIDACTFPSVLKACGALGESR 162
Query: 143 FGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC-TEEVNLISKNAMVAA 201
G ++H VK F ++LI MY KC A +F+G E+ + +S N++++A
Sbjct: 163 LGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISA 222
Query: 202 CCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHT 261
EG+ E L LF RM E GV N +T
Sbjct: 223 HVTEGK--------------------------------CLEALSLFRRMQEVGVASNTYT 250
Query: 262 FASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKG 321
F +AL VK IH LK+ ++ +V++ ++ +Y KC
Sbjct: 251 FVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKC-------------- 296
Query: 322 VRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSE 381
G ME+A R F S+ ++ V W L SG V QN E D L+
Sbjct: 297 -----------------GRMEDAERVFASMLCRDYVSWNTLLSGLV--QN-ELYRDALNY 336
Query: 382 F--VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
F + D + ++ L+ A L GKE+HAY +R G+ + ++ +TL+DMY+K
Sbjct: 337 FRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAK 396
Query: 440 CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
C + + F+ E+DL+ + +IA YA + +AI LF ++ KG+ D + ++
Sbjct: 397 CCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSV 456
Query: 500 LSA 502
L A
Sbjct: 457 LRA 459
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 162/385 (42%), Gaps = 69/385 (17%)
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L+LCV + + G+QLHA ++K+ S F + L+ MY KC ++A +VF+
Sbjct: 53 LDLCVAVKALPQGQQLHARLLKS--HLSAFLATKLLHMYEKCGSLKDAVKVFD------- 103
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
EM +T + +WN ++ +V +G E ++L+ M
Sbjct: 104 -----------------EMTERTIF---------TWNAMMGAFVSSGKYLEAIELYKEMR 137
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
GV + TF S L AC L + EIH +K G FV + ++ +Y KC
Sbjct: 138 VLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKC---- 193
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT--EKNVVVWTALFSGYVKA 369
G++ AR FD + +++ V W ++ S +V
Sbjct: 194 ---------------------------GDLGGARVLFDGIMMEKEDTVSWNSIISAHVTE 226
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
C L + + GV ++ V L + + G IH L+ D +
Sbjct: 227 GKCLEALSLFRR-MQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYV 285
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+ L+ MY+KCG M AE +F + + RD V +N +++ + A+ F +M
Sbjct: 286 ANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQ 345
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEK 514
KPD V+ + +++A G++ G++
Sbjct: 346 KPDQVSVLNLIAASGRSGNLLNGKE 370
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 129/298 (43%), Gaps = 49/298 (16%)
Query: 259 EHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLL 318
EH + L C ++ + +++H+ +LK+ L + F+++ ++ +Y KC
Sbjct: 46 EHAHSLLLDLCVAVKALPQGQQLHARLLKSHL--SAFLATKLLHMYEKC----------- 92
Query: 319 LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDL 378
G++++A + FD +TE+ + W A+ +V + +L
Sbjct: 93 --------------------GSLKDAVKVFDEMTERTIFTWNAMMGAFVSSGKYLEAIEL 132
Query: 379 LSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYS 438
E GV DA +L AC G EIH ++ G + + L+ MY
Sbjct: 133 YKEMRVL-GVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYG 191
Query: 439 KCGNMTYAEIIFQNFI--ERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTF 496
KCG++ A ++F + + D V +N +I+ + G +A+ LF M E G+ + TF
Sbjct: 192 KCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTF 251
Query: 497 VAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA------CMIDLYGRANQLEKA 548
VA L V++G + + +++H+A +I +Y + ++E A
Sbjct: 252 VAALQGVEDPSFVKLG-------MGIHGAALKSNHFADVYVANALIAMYAKCGRMEDA 302
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 12/178 (6%)
Query: 397 ILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER 456
+LL C AL G+++HA +L+ + L + L+ MY KCG++ A +F ER
Sbjct: 51 LLLDLCVAVKALPQGQQLHARLLK--SHLSAFLATKLLHMYEKCGSLKDAVKVFDEMTER 108
Query: 457 DLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYF 516
+ +N M+ + G +AI L++EM G+ DA TF ++L A CG+ +GE
Sbjct: 109 TIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKA---CGA--LGESRL 163
Query: 517 NSMTADYKISPETDHYA----CMIDLYGRANQLEKAIEFMKSIPTE-EDAVILGSFLN 569
+ + + +I +YG+ L A I E ED V S ++
Sbjct: 164 GAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIIS 221
>gi|15228064|ref|NP_181235.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206293|sp|Q9SJK9.1|PP189_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g36980, mitochondrial; Flags: Precursor
gi|4883614|gb|AAD31583.1| hypothetical protein [Arabidopsis thaliana]
gi|330254236|gb|AEC09330.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 625
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 199/618 (32%), Positives = 318/618 (51%), Gaps = 23/618 (3%)
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
I++ KS + AR +FD P D V +N+ML Y + G +A+ LF +++ +D +
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSY-SRLGLHQEAIALFTQLRFSDA--K 67
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
D+++ T+ L+ C L NV FGR++ + ++++ AS +SLIDMY KC A +V
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKV 127
Query: 183 FEG-CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
F C + N ++ +++ A + E AL F P+ A +WN +ISG+ G E
Sbjct: 128 FRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPK-RVAFAWNIMISGHAHCGKLE 186
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCG-LRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
L LF M E+ + + +TF+S ++AC NV + +H+ +LKNG S + +
Sbjct: 187 SCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSV 246
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
+ Y K + + A L V S +S+I G E+A F EKN+V WT
Sbjct: 247 LSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWT 306
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
+ +GY + + E E + K GV +D +L AC+ A L GK IH ++
Sbjct: 307 TMITGYGRNGDGEQALRFFVEMM-KSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIH 365
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
G Q + + LV++Y+KCG++ A+ F + +DLV +N M+ + HG ++A+ L
Sbjct: 366 CGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKL 425
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
++ M+ GIKPD VTF+ +L+ H G VE G F SM DY+I E DH CMID++G
Sbjct: 426 YDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFG 485
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGS--------FLNVCRLNRNAELAGEAEEKLLRLEG 592
R L +A K + T +++ S L C + + EL E + L E
Sbjct: 486 RGGHLAEA----KDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEP 541
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVS 650
+ + +V L+N+Y + G W E +R++M RGMK + GCSW+ V +++ F VGD S
Sbjct: 542 SEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMK--KTPGCSWIEVGNQVSTFVVGDSS 599
Query: 651 HPKTNAIYSVLAIFTGEL 668
HP+ + L E+
Sbjct: 600 HPRLEELSETLNCLQHEM 617
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 213/438 (48%), Gaps = 47/438 (10%)
Query: 17 IKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEM--PERNVFSWNTIISACIKSHDLKQ 74
I++G + N LI +Y K + + K+F +M RN +W +++ A + + +
Sbjct: 97 IRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEA 156
Query: 75 ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNL 134
A +F P + +N M+ G+ + E+ L LF EM ++ + D +T +S +N
Sbjct: 157 ALDVFVEMPKRVAFAWNIMISGHAHCGKLES-CLSLFKEMLESE--FKPDCYTFSSLMNA 213
Query: 135 C-VKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLI 193
C NV +GR +HA M+K ++ A +S++ Y+K ++A R E E + +
Sbjct: 214 CSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELES-IEVLTQV 272
Query: 194 SKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGEN 253
S N+++ AC + GE E AL+ F PE N V+W T+I+GY +NGD E+ L+ FV M ++
Sbjct: 273 SWNSIIDACMKIGETEKALEVFHLAPEKN-IVTWTTMITGYGRNGDGEQALRFFVEMMKS 331
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA 313
GV + + + L AC GL + K IH ++ G +V + +V++Y KC
Sbjct: 332 GVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKC------ 385
Query: 314 ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW-TALFSGYVKAQNC 372
G+++EA R F + K++V W T LF+ V
Sbjct: 386 -------------------------GDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLAD 420
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL---RMGVQMDKKL 429
+AL L + + G+ D + + LL C+ + G I ++ R+ +++D
Sbjct: 421 QAL--KLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDH-- 476
Query: 430 ISTLVDMYSKCGNMTYAE 447
++ ++DM+ + G++ A+
Sbjct: 477 VTCMIDMFGRGGHLAEAK 494
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 124/268 (46%), Gaps = 38/268 (14%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTI 62
S N+ + H +K G + N ++ Y+K ++ + + + SWN+I
Sbjct: 218 SSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSI 277
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGY-INAEGYEADALKLFIEMQSADEHI 121
I AC+K + ++A +F +P K++VT+ +M+ GY N +G + AL+ F+EM + +
Sbjct: 278 IDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQ--ALRFFVEMMKSG--V 333
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
D F + L+ C L +G G+ +H ++ + ++L+++Y+KC +EA R
Sbjct: 334 DSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADR 393
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
F G +L+S WNT++ + +G A+
Sbjct: 394 AF-GDIANKDLVS--------------------------------WNTMLFAFGVHGLAD 420
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSAC 269
+ LKL+ M +G++ + TF L+ C
Sbjct: 421 QALKLYDNMIASGIKPDNVTFIGLLTTC 448
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 40/211 (18%)
Query: 328 ISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA---QNCEALFDLLSEFVT 384
++S I + G + AR+ FD + E + V W + + Y + Q ALF L
Sbjct: 7 LTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDA 66
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
K D +L CA + G++I + ++R G + ++L+DMY KC +
Sbjct: 67 KP----DDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTL 122
Query: 445 YAEIIFQN------------------------------FIE---RDLVLYNVMIACYAHH 471
A +F++ F+E R +N+MI+ +AH
Sbjct: 123 SANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHC 182
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
G E + LF+EMLE KPD TF ++++A
Sbjct: 183 GKLESCLSLFKEMLESEFKPDCYTFSSLMNA 213
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 2/117 (1%)
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
+L S + + +K G + A +F E D V +N M+ Y+ G ++AI LF ++
Sbjct: 6 RLTSKIASL-AKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFS 64
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
KPD +F AILS G+V+ G K S+ +ID+YG+ +
Sbjct: 65 DAKPDDYSFTAILSTCASLGNVKFGRK-IQSLVIRSGFCASLPVNNSLIDMYGKCSD 120
>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 187/657 (28%), Positives = 316/657 (48%), Gaps = 104/657 (15%)
Query: 7 KEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISAC 66
++ L+ H +K G N LI Y+K N++ ++ +F+ M
Sbjct: 434 RDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRM--------------- 478
Query: 67 IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEF 126
P +D +++NS++ G ++ G ++A++LFI M + + +D
Sbjct: 479 ----------------PRQDTISWNSVISG-CSSNGLNSEAIELFIRMWTQGQE--LDSV 519
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
T+ S L C + GR +H + VKT ++L+DMYS C ++ ++F
Sbjct: 520 TLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSM 579
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
++ + VSW +I+ Y++ G ++ L
Sbjct: 580 GQK---------------------------------NVVSWTAMITSYMRAGLFDKVAGL 606
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
M +G+R + SAL A G ++K K +H + ++NG+ V++ ++++Y K
Sbjct: 607 LQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVK 666
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
C N+EEAR FD +T K+V+ W L GY
Sbjct: 667 CR-------------------------------NVEEARLIFDRVTNKDVISWNTLIGGY 695
Query: 367 VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMD 426
+ F L S+ + + +A+ + +L A A ++L G+EIHAY LR G D
Sbjct: 696 SRNNFPNESFSLFSDMLLQ--FRPNAVTMTCILPAAASISSLERGREIHAYALRRGFLED 753
Query: 427 KKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
+ LVDMY KCG + A ++F +++L+ + +MIA Y HG + AI LFE+M
Sbjct: 754 SYASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRG 813
Query: 487 KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLE 546
GI+PDA +F AIL A H G G ++F +M +YKI P+ HY C++DL R L+
Sbjct: 814 SGIEPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLK 873
Query: 547 KAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYA 606
+A+EF++S+P E D+ I S L+ CR+++N +LA + +K+ +LE N YV LAN+YA
Sbjct: 874 EALEFIESMPIEPDSSIWVSLLHGCRIHKNVKLAEKVADKVFKLEPENTGYYVLLANIYA 933
Query: 607 AEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
W + +++ ++ RG++ N G SW+ V ++H+F + +HP N I L
Sbjct: 934 EAERWEAVKKLKNKIGGRGLREN--TGYSWIEVRSKVHVFIADNRNHPDWNRIAEFL 988
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 119/470 (25%), Positives = 203/470 (43%), Gaps = 89/470 (18%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N +I+ + ++ A +FDS +D +++NSM+ G + G+ A+ LF +M S
Sbjct: 243 NALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCFS-NGWHGTAVDLFSKMWSQGT 301
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTS------------NDASGFAVSSLI 167
I TV S L C L G+ +H + VK+ +DA+ S L+
Sbjct: 302 EI--SSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAA--LGSKLV 357
Query: 168 DMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSW 227
MY KC A RVF+ + + N+ W
Sbjct: 358 FMYVKCGDMASARRVFDAMSSKGNVHV--------------------------------W 385
Query: 228 NTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKE---IHSW 284
N ++ GY + G+ EE L LFV+M E G+ +EH S L C + + CA++ H +
Sbjct: 386 NLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAI-SCLLKC--ITCLSCARDGLVAHGY 442
Query: 285 VLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEA 344
++K G + V + ++ Y K S+MI +A
Sbjct: 443 IVKLGFGAQCAVCNALISFYAK----------------------SNMI---------GDA 471
Query: 345 RRHFDSLTEKNVVVWTALFSG-YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACA 403
F+ + ++ + W ++ SG N EA+ +L T +G D++ L+ +L ACA
Sbjct: 472 VLVFNRMPRQDTISWNSVISGCSSNGLNSEAI-ELFIRMWT-QGQELDSVTLLSVLPACA 529
Query: 404 LQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNV 463
G+ +H Y ++ G+ + L + L+DMYS C + IF++ ++++V +
Sbjct: 530 QSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTA 589
Query: 464 MIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
MI Y G +K L +EM+ GI+PD + L AF S++ G+
Sbjct: 590 MITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGK 639
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 114/447 (25%), Positives = 189/447 (42%), Gaps = 67/447 (14%)
Query: 62 IISACIKSHDLKQARSLFDSSPHK--DLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
++ A +K DL +AR++FD P + D+ + S++ Y A ++ +A+ LF +MQ
Sbjct: 142 LVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQ-EAVSLFRQMQCCG- 199
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
+ D V+ L L ++ G +H + K + ++LI +YS+C E+A
Sbjct: 200 -VSPDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDA 258
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
RVF+ + IS N+M+ C NG
Sbjct: 259 ARVFDS-MHPRDAISWNSMIGGC--------------------------------FSNGW 285
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISN-PFVSS 298
+ LF +M G + T S L AC GL K +H + +K+GL+ V S
Sbjct: 286 HGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQS 345
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK-NVV 357
GI D S ++ Y G+M ARR FD+++ K NV
Sbjct: 346 GIDDAALG----------------------SKLVFMYVKCGDMASARRVFDAMSSKGNVH 383
Query: 358 VWTALFSGYVKAQNCEALFDLLSEFVTKE--GVVTDALILVILLGACALQAALHPGKEIH 415
VW + GY K E + LS FV G+ D + LL + G H
Sbjct: 384 VWNLIMGGYAKVGEFE---ESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAH 440
Query: 416 AYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEE 475
YI+++G + + L+ Y+K + A ++F +D + +N +I+ + +G
Sbjct: 441 GYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNS 500
Query: 476 KAILLFEEMLEKGIKPDAVTFVAILSA 502
+AI LF M +G + D+VT +++L A
Sbjct: 501 EAIELFIRMWTQGQELDSVTLLSVLPA 527
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 92/184 (50%), Gaps = 3/184 (1%)
Query: 321 GVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK--NVVVWTALFSGYVKAQNCEALFDL 378
G + S +++ Y G++ EAR FD + + +V VWT+L S Y KA + + L
Sbjct: 132 GGKGSVLGKRLVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSL 191
Query: 379 LSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYS 438
+ GV DA + +L + +L G+ IH + ++G+ + + L+ +YS
Sbjct: 192 FRQMQCC-GVSPDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYS 250
Query: 439 KCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVA 498
+CG M A +F + RD + +N MI +G A+ LF +M +G + +VT ++
Sbjct: 251 RCGRMEDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLS 310
Query: 499 ILSA 502
+L A
Sbjct: 311 VLPA 314
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 110/266 (41%), Gaps = 68/266 (25%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+LK+ H I+ G+ N L+ +Y K + E+R +FD + ++V SWNT+I
Sbjct: 634 SLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIG 693
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
+++ ++ SLF +D L F R +
Sbjct: 694 GYSRNNFPNESFSLF-------------------------SDMLLQF----------RPN 718
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
T+T L + ++ GR++HA+ ++ +A ++L+DMY KC A +F+
Sbjct: 719 AVTMTCILPAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFD 778
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
T++ NLI SW +I+GY +G + +
Sbjct: 779 RLTKK-NLI--------------------------------SWTIMIAGYGMHGFGKHAI 805
Query: 245 KLFVRMGENGVRWNEHTFASALSACC 270
LF +M +G+ + +F++ L ACC
Sbjct: 806 ALFEQMRGSGIEPDAASFSAILYACC 831
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 79/194 (40%), Gaps = 10/194 (5%)
Query: 387 GVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK----LISTLVDMYSKCGN 442
GV + +V+ L C + +L K HA I L LV Y KCG+
Sbjct: 94 GVDVRSYCMVVQL--CGEERSLEAAKRAHALIRASSAAATGGKGSVLGKRLVLAYLKCGD 151
Query: 443 MTYAEIIFQNFIER--DLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAIL 500
+ A +F + D+ ++ +++ YA G ++A+ LF +M G+ PDA +L
Sbjct: 152 LGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVL 211
Query: 501 SAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEED 560
GS+ GE + + + +I +Y R ++E A S+ D
Sbjct: 212 KCVSSLGSLTEGE-VIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSM-HPRD 269
Query: 561 AVILGSFLNVCRLN 574
A+ S + C N
Sbjct: 270 AISWNSMIGGCFSN 283
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 174/572 (30%), Positives = 299/572 (52%), Gaps = 39/572 (6%)
Query: 135 CVKLLNVGFGRQLHAFMVK-TSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLI 193
CV+ + ++L + M F + L+ +Y+K +A +F+ + +
Sbjct: 32 CVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKMLKR-DXF 90
Query: 194 SKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGEN 253
S NA+++A + G ++ TF R P D+VS+NT I+G+ N +E L+LF RM
Sbjct: 91 SWNALLSAYAKSGSIQNLKATFDRMP-FRDSVSYNTTIAGFSGNSCPQESLELFKRMQRE 149
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA 313
G E+T S L+A L +++ K+IH ++ + N F+ + + D+Y KC + A
Sbjct: 150 GFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQA 209
Query: 314 ESM-------------LLLKG----------------------VRNSFSISSMIVGYSLQ 338
+ L++ G + + ++S++I Y
Sbjct: 210 RWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQC 269
Query: 339 GNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVIL 398
G ++EARR F EK++V WTA+ GY K E L +E + E + D+ L +
Sbjct: 270 GRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLL-EHIEPDSYTLSSV 328
Query: 399 LGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDL 458
+ +CA A+LH G+ +H + G+ + + S L+DMYSKCG + A +F R++
Sbjct: 329 VSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNV 388
Query: 459 VLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNS 518
V +N MI A +GH++ A+ LFE ML++ KPD VTF+ ILSA HC +E G++YF+S
Sbjct: 389 VSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDS 448
Query: 519 MTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAE 578
++ + ++P DHYACM++L GR ++E+A+ +K++ + D +I + L++C +
Sbjct: 449 ISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIV 508
Query: 579 LAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVE 638
A A L L+ Y+ L+N+YA+ G W ++ +R M+ +FAG SW+ ++
Sbjct: 509 NAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEID 568
Query: 639 HEIHIFTVGDVSHPKTNAIYSVLAIFTGELYE 670
+E+H FT D +HP++ IY L + G+L E
Sbjct: 569 NEVHRFTSEDRTHPESEDIYEKLNMLIGKLQE 600
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 141/508 (27%), Positives = 245/508 (48%), Gaps = 58/508 (11%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLV 88
NQL+H+Y+K LR+++ LFD+M +R+ FSWN ++SA KS ++ ++ FD P +D V
Sbjct: 62 NQLLHLYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSV 121
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLH 148
+YN+ + G+ + ++L+LF MQ E E+T+ S LN +LL++ +G+Q+H
Sbjct: 122 SYNTTIAGF-SGNSCPQESLELFKRMQR--EGFEPTEYTIVSILNASAQLLDLRYGKQIH 178
Query: 149 AFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAM---------- 198
++ + + F ++L DMY+KC E+A +F+ C + NL+S N M
Sbjct: 179 GSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFD-CLTKKNLVSWNLMISGYAKNGQP 237
Query: 199 -------------------------VAACCREGEMEMALKTFWRQPELNDAVSWNTLISG 233
+AA C+ G ++ A + F E D V W ++ G
Sbjct: 238 EKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKE-KDIVCWTAMMVG 296
Query: 234 YVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISN 293
Y +NG E+ L LF M + + +T +S +S+C L ++ + +H + GL +N
Sbjct: 297 YAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNN 356
Query: 294 PFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
VSS ++D+Y KC ++ A S+ L RN S ++MIVG + G+ ++A F+++ +
Sbjct: 357 LLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQ 416
Query: 354 KNVVVWTALFSGYVKA-------QNCEALFDLLSEFVTKEGVVTDALILVILLGACA-LQ 405
+ F G + A + + FD +S + +V LLG ++
Sbjct: 417 QKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIE 476
Query: 406 AALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD---LVLYN 462
A+ A I M D + STL+ + S G++ AE+ ++ E D V Y
Sbjct: 477 QAV-------ALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYI 529
Query: 463 VMIACYAHHGHEEKAILLFEEMLEKGIK 490
++ YA G + + M K +K
Sbjct: 530 MLSNMYASMGRWKDVASVRNLMKSKNVK 557
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 38/232 (16%)
Query: 19 AGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSL 78
+G +T + +I Y + + E+R++F E E
Sbjct: 250 SGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKE------------------------- 284
Query: 79 FDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKL 138
KD+V + +M+ GY G E DAL LF EM EHI D +T++S ++ C KL
Sbjct: 285 ------KDIVCWTAMMVGYAK-NGREEDALLLFNEMLL--EHIEPDSYTLSSVVSSCAKL 335
Query: 139 LNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAM 198
++ G+ +H + + + S+LIDMYSKC ++A VF N++S NAM
Sbjct: 336 ASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVF-NLMPTRNVVSWNAM 394
Query: 199 VAACCREGEMEMALKTF---WRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
+ C + G + AL+ F +Q D V++ ++S + E+G + F
Sbjct: 395 IVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYF 446
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H ++I AGL + ++ LI +YSK + ++R +F+ MP RNV SWN +I C ++
Sbjct: 345 HGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHD 404
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINA 100
K A LF++ + N G ++A
Sbjct: 405 KDALELFENMLQQKFKPDNVTFIGILSA 432
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 191/662 (28%), Positives = 330/662 (49%), Gaps = 77/662 (11%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFD-EMPERNVFSWNTIISACIKSHD 71
H I GL + I + +LI Y+ S +F P NV+ WN+II A
Sbjct: 36 HSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRA------ 89
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
+T+N + ++AL L+ E Q ++ D +T S
Sbjct: 90 ----------------LTHNGLF----------SEALSLYSETQRI--RLQPDTYTFPSV 121
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
+N C LL+ + +H ++ + + ++LIDMY
Sbjct: 122 INACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMY--------------------- 160
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL------- 244
CR +++ A K F P L D VSWN+LISGY NG E L
Sbjct: 161 -----------CRFNDLDKARKVFEEMP-LRDVVSWNSLISGYNANGYWNEALEIYYQSI 208
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
KLF+ M N + + T S L AC L +++ K +H +++ +G + S+ ++++Y
Sbjct: 209 KLFMEM-VNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMY 267
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
KC N+ ++ + ++S S +SMI Y G M ++ + F+++ ++++ W + +
Sbjct: 268 AKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIA 327
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
V +++C ++S T EGV D ++ +L C+L AA GKEIH I ++G++
Sbjct: 328 SCVHSEDCNLGLRMISRMRT-EGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLE 386
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
D + + L++MYSKCG++ + +F+ +D+V + +I+ +G +KA+ F EM
Sbjct: 387 SDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEM 446
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
GI PD V FVAI+ A H G VE G YF+ M DYKI P +HYAC++DL R+
Sbjct: 447 EAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSAL 506
Query: 545 LEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANV 604
L+KA +F+ S+P + D+ I G+ L+ CR++ + E+A E+++ L ++ YV ++N+
Sbjct: 507 LDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNI 566
Query: 605 YAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIF 664
YAA G W ++ IRK ++ + GCSW+ +++++++F G + + +L +
Sbjct: 567 YAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGML 626
Query: 665 TG 666
G
Sbjct: 627 AG 628
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 150/571 (26%), Positives = 243/571 (42%), Gaps = 135/571 (23%)
Query: 4 LNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
L+ + A H + + G N LI +Y + N L ++RK+F+EMP R+V SWN++I
Sbjct: 129 LDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLI 188
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADAL-------KLFIEMQS 116
S GY NA GY +AL KLF+EM +
Sbjct: 189 S-------------------------------GY-NANGYWNEALEIYYQSIKLFMEMVN 216
Query: 117 ADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCY 176
+ D T+TS L C L ++ FG+ +H +M+ + + A + LI+MY+KC
Sbjct: 217 ---QFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNL 273
Query: 177 EEACRVFEG--CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
+ VF G C + V S N+M+ + G+M +LK F + D ++WNT+I+
Sbjct: 274 LASQEVFSGMKCKDSV---SWNSMINVYIQNGKMGDSLKVF-ENMKARDIITWNTIIASC 329
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
V + D GL++ RM GV + T S L C L + KEIH + K GL S+
Sbjct: 330 VHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDV 389
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
V + ++++Y KC ++ RNSF + F + K
Sbjct: 390 PVGNVLIEMYSKCGSL------------RNSFQV-------------------FKLMKTK 418
Query: 355 NVVVWTALFSG---YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG 411
+VV WTAL S Y + + F + G+V D + V ++ AC+ + G
Sbjct: 419 DVVTWTALISACGMYGEGKKAVRAFGEME----AAGIVPDHVAFVAIIFACSHSGLVEEG 474
Query: 412 KEIHAYILRMGVQMDKKL------ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMI 465
Y RM + D K+ + +VD+ S+ + AE +FI
Sbjct: 475 LN---YFHRM--KKDYKIEPRIEHYACVVDLLSRSALLDKAE----DFI----------- 514
Query: 466 ACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKI 525
L +KPD+ + A+LSA R G E+ E+ + ++
Sbjct: 515 -------------------LSMPLKPDSSIWGALLSACRMSGDTEIAERVSERII---EL 552
Query: 526 SP-ETDHYACMIDLYGRANQLEKAIEFMKSI 555
+P +T +Y + ++Y + ++ KSI
Sbjct: 553 NPDDTGYYVLVSNIYAALGKWDQVRSIRKSI 583
>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 193/664 (29%), Positives = 317/664 (47%), Gaps = 100/664 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H IK GL + + + L+ +Y K N ++ LF+EMPE
Sbjct: 129 HTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPE------------------- 169
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
KD+ +N+++ Y + ++ DAL+ F M+ + T+T+ +
Sbjct: 170 ------------KDVACWNTVISCYYQSGNFK-DALEYFGLMRRFG--FEPNSVTITTAI 214
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C +LL++ G ++H ++ + F S+L+DMY KC
Sbjct: 215 SSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKC------------------- 255
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
G +EMA++ F + P+ V+WN++ISGY GD ++LF RM
Sbjct: 256 -------------GHLEMAIEIFEQMPK-KTVVAWNSMISGYGLKGDIISCIQLFKRMYN 301
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
GV+ T +S + C + K +H + ++N + + FV+S ++D+Y KC
Sbjct: 302 EGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKC----- 356
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G +E A + F + + VV W + SGYV
Sbjct: 357 --------------------------GKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKL 390
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
L SE + K V +DA+ +L AC+ AAL GKEIH I+ + ++ ++
Sbjct: 391 FEALGLFSE-MRKSYVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGA 449
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
L+DMY+KCG + A +F+ +RDLV + MI Y HGH A+ LF EML+ +KPD
Sbjct: 450 LLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQSNVKPD 509
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
V F+AILSA H G V+ G YFN M Y I P +HY+C+IDL GRA +L +A E +
Sbjct: 510 RVAFLAILSACGHAGLVDEGCYYFNQMINVYGIIPRVEHYSCLIDLLGRAGRLHEAYEIL 569
Query: 553 KSIP-TEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNW 611
+ P +D +L + + CRL+RN +L E L+ + ++ + Y+ L+N+YA+ W
Sbjct: 570 QQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILLSNMYASAHKW 629
Query: 612 AEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEI 671
E+ +R +M+ + + GCSW+ + +I F V D SH ++ L+ + + +
Sbjct: 630 DEVRVVRSKMKELGLKKNPGCSWIEINQKILPFFVEDNSHLHLELVFKCLSYLSDHMEDE 689
Query: 672 AGAF 675
+ +F
Sbjct: 690 SKSF 693
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 115/477 (24%), Positives = 201/477 (42%), Gaps = 111/477 (23%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R L+L + H + I +G L + ++ L+ +Y K L + ++F++MP++ V +WN+
Sbjct: 219 RLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNS 278
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+IS GY +G ++LF M +E +
Sbjct: 279 MIS-------------------------------GY-GLKGDIISCIQLFKRMY--NEGV 304
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+ T++S + +C + + G+ +H + ++ F SSL+D+Y KC
Sbjct: 305 KPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKC-------- 356
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
G++E+A K F P+ + VSWN +ISGYV G
Sbjct: 357 ------------------------GKVELAEKIFKLIPK-SKVVSWNVMISGYVAEGKLF 391
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E L LF M ++ V + TF S L+AC L ++ KEIH+ +++ L +N V ++
Sbjct: 392 EALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALL 451
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D+Y KC G ++EA F L ++++V WT+
Sbjct: 452 DMYAKC-------------------------------GAVDEAFSVFKCLPKRDLVSWTS 480
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG-----KEIHA 416
+ + Y + +L +E + + V D + + +L AC + G + I+
Sbjct: 481 MITAYGSHGHAYGALELFAEML-QSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINV 539
Query: 417 YILRMGVQMDKKLISTLVDMYSKCGNMTYA-EIIFQNFIERDLV--LYNVMIACYAH 470
Y G+ + S L+D+ + G + A EI+ QN RD V L + AC H
Sbjct: 540 Y----GIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLH 592
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 128/301 (42%), Gaps = 47/301 (15%)
Query: 266 LSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNS 325
L AC +++K K IH V+ GL ++ F+ +++ Y C ++A+ +
Sbjct: 10 LRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVF-------- 61
Query: 326 FSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTK 385
NME + +W L +GY K +L + +
Sbjct: 62 -------------DNMENPCE---------ISLWNGLMAGYTKNYMYVEALELFEKLLHY 99
Query: 386 EGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTY 445
+ D+ + AC GK IH +++ G+ MD + S+LV MY KC
Sbjct: 100 PYLKPDSYTYPSVFKACGGLHRYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEK 159
Query: 446 AEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRH 505
A +F E+D+ +N +I+CY G+ + A+ F M G +P++VT I +A
Sbjct: 160 AIWLFNEMPEKDVACWNTVISCYYQSGNFKDALEYFGLMRRFGFEPNSVT---ITTAISS 216
Query: 506 CG-------SVEMGEKYFNS-MTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPT 557
C +E+ E+ NS D IS + ++D+YG+ LE AIE + +P
Sbjct: 217 CARLLDLNRGMEIHEELINSGFLLDSFIS------SALVDMYGKCGHLEMAIEIFEQMPK 270
Query: 558 E 558
+
Sbjct: 271 K 271
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 89/176 (50%), Gaps = 9/176 (5%)
Query: 391 DALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIF 450
D L+ LL AC +L GK IH ++ +G+Q D L TL++ Y C +A+ +F
Sbjct: 2 DTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVF 61
Query: 451 QNFIER-DLVLYNVMIACYAHHGHEEKAILLFEEMLEKG-IKPDAVTFVAILSAFRHCGS 508
N ++ L+N ++A Y + +A+ LFE++L +KPD+ T+ S F+ CG
Sbjct: 62 DNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYP---SVFKACGG 118
Query: 509 VE---MGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDA 561
+ +G K ++ + + + ++ +YG+ N EKAI +P ++ A
Sbjct: 119 LHRYVLG-KMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVA 173
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 202/679 (29%), Positives = 352/679 (51%), Gaps = 26/679 (3%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + +G + N+LI Y K + +R LFD++P+ ++ + T++SA + ++
Sbjct: 19 HAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAATTMLSAYSAAGNI 78
Query: 73 KQARSLFDSSPH--KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
K A LF+++P +D V+YN+M+ + ++ A AL+LF++M+ D FT +S
Sbjct: 79 KLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHA-ALQLFVQMKRLG--FVPDPFTFSS 135
Query: 131 TLN-LCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMY---------SKCRCYEEAC 180
L L + +QLH + K + +++L+ Y + C A
Sbjct: 136 VLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMAAAR 195
Query: 181 RVF-EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
++F E + + ++A R ++ +A + + AV+WN +ISGYV G
Sbjct: 196 KLFDEAPPGRRDEPAWTTIIAGYVRNDDL-VAARELLEGMTDHIAVAWNAMISGYVHRGF 254
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSAC--CGLRNVKCAKEIHSWVLKNGL-ISNPFV 296
EE L RM G++ +E+T+ S +SA GL N+ +++H++VL+ + S FV
Sbjct: 255 YEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNI--GRQVHAYVLRTVVQPSGHFV 312
Query: 297 SS---GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
S ++ +Y +C + A + V++ S ++++ G +EEA F +
Sbjct: 313 LSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPV 372
Query: 354 KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
++++ WT + SG + E L ++ + EG+ + +C++ +L G++
Sbjct: 373 RSLLTWTVMISGLAQNGFGEEGLKLFNQ-MKLEGLEPCDYAYAGAIASCSVLGSLDNGQQ 431
Query: 414 IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH 473
+H+ I+++G + + L+ MYS+CG + A+ +F D V +N MIA A HGH
Sbjct: 432 LHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGH 491
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA 533
+AI L+E+ML++ I PD +TF+ ILSA H G V+ G YF++M Y I+PE DHY+
Sbjct: 492 GVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHYS 551
Query: 534 CMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGN 593
+IDL RA +A +S+P E A I + L C ++ N EL +A ++LL L
Sbjct: 552 RLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLELMPQ 611
Query: 594 NKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPK 653
Y+ L+N+YAA G W E+ R+RK MR + GCSW+ VE+ +H+F V D HP+
Sbjct: 612 QDGTYISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWIEVENMVHVFLVDDAVHPE 671
Query: 654 TNAIYSVLAIFTGELYEIA 672
+A+Y L E+ ++
Sbjct: 672 VHAVYRYLEQLVHEMRKLG 690
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 187/400 (46%), Gaps = 23/400 (5%)
Query: 137 KLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKN 196
+L + F R +HA ++ + ++ LID Y K A +F+ + ++++
Sbjct: 8 QLSHTSFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKP-DIVAAT 66
Query: 197 AMVAACCREGEMEMALKTFWRQP-ELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGV 255
M++A G +++A + F P + D VS+N +I+ + + D L+LFV+M G
Sbjct: 67 TMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGF 126
Query: 256 RWNEHTFASALSACCGLRNVKC-AKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
+ TF+S L A + + + +++H V K G +S P V + ++ Y C +
Sbjct: 127 VPDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVN 186
Query: 315 SMLLLKGVRNSF-----------SISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
S +L+ R F + +++I GY ++ AR + +T+ V W A+
Sbjct: 187 SCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMI 246
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
SGYV E FDLL + G+ D ++ A + + G+++HAY+LR V
Sbjct: 247 SGYVHRGFYEEAFDLLRR-MHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVV 305
Query: 424 QMDKKLI----STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
Q + + L+ +Y++CG + A +F +DLV +N +++ + E+A
Sbjct: 306 QPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANS 365
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSM 519
+F EM + + +T+ ++S G E G K FN M
Sbjct: 366 IFREMPVRSL----LTWTVMISGLAQNGFGEEGLKLFNQM 401
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 149/359 (41%), Gaps = 54/359 (15%)
Query: 272 LRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSM 331
L + A+ +H+ +L +G P + + ++D YCK N+ YA + + + ++M
Sbjct: 9 LSHTSFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAATTM 68
Query: 332 IVGYSLQGNMEEARRHFDS--LTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVV 389
+ YS GN++ A + F++ ++ ++ V + A+ + + + + A L + + + G V
Sbjct: 69 LSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQ-MKRLGFV 127
Query: 390 TDALILVILLGACALQAALHPG-KEIHAYILRMGV------------------------- 423
D +LGA +L A +++H + + G
Sbjct: 128 PDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNS 187
Query: 424 -----------------QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIA 466
+ D+ +T++ Y + ++ A + + + V +N MI+
Sbjct: 188 CVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMIS 247
Query: 467 CYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKIS 526
Y H G E+A L M GI+ D T+ +++SA + G +G + ++ +
Sbjct: 248 GYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQ-VHAYVLRTVVQ 306
Query: 527 PETDHYA-----CMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELA 580
P + H+ +I LY R +L +A +P +D V + L+ C R E A
Sbjct: 307 P-SGHFVLSVNNALITLYTRCGKLVEARRVFDKMPV-KDLVSWNAILSGCVNARRIEEA 363
>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 707
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 194/643 (30%), Positives = 333/643 (51%), Gaps = 59/643 (9%)
Query: 32 IHIYSKHNLLRESRKLFD--EMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVT 89
I Y + + +RK+FD +P+R + SWN ++SA +SH + A LFD P ++ V+
Sbjct: 26 ISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMPQRNTVS 85
Query: 90 YNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHA 149
+N M+ GY+ G ADA K+F D + + TS + V+ V +L
Sbjct: 86 FNGMISGYVK-NGMVADARKVF------DVMPERNVVSWTSMVRGYVQEGMVEEAEKLFW 138
Query: 150 FMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEME 209
M + + + + L+ K ++A ++F+ E+ ++ N M+ C+ G ++
Sbjct: 139 EMPRRNVVSWTVMIGGLL----KESRIDDAKKLFDMIPEKDVVVVTN-MIGGYCQVGRLD 193
Query: 210 MALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
A + F + ++ + +W T++SGY +NG + KLF M E NE ++ + L
Sbjct: 194 EARELF-DEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPER----NEVSWTAMLMG- 247
Query: 270 CGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSIS 329
Y + M A + V+ + +
Sbjct: 248 ----------------------------------YTQSGRMKEAFELFEAMPVKWIVACN 273
Query: 330 SMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY-VKAQNCEALFDLLSEFVTKEGV 388
MI+ + L G M AR F+ + E++ W A+ + K + EAL L + +EGV
Sbjct: 274 EMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALG--LFARMQREGV 331
Query: 389 VTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEI 448
+ ++ +L CA A+L G+++HA ++R D + S L+ MY KCG++ A+
Sbjct: 332 ALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKG 391
Query: 449 IFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGS 508
IF F+ +D+V++N MI Y+ HG E+A+ +F +M G++PD VTF+ +LSA + G
Sbjct: 392 IFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGK 451
Query: 509 VEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFL 568
V+ G + F +M Y++ P +HYACM+DL GRA ++++A+E ++ +P E DA++ G+ L
Sbjct: 452 VKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALL 511
Query: 569 NVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNR 628
CR + +LA A EKL +LE N YV L+++YA +G W ++ +RK++ + +
Sbjct: 512 GACRNHMKLDLAEVAVEKLAKLEPKNAGPYVLLSHMYATKGRWRDVEVLRKKI-NRRVIK 570
Query: 629 FAGCSWVYVEHEIHIFTVGDV-SHPKTNAIYSVLAIFTGELYE 670
F GCSW+ VE ++H+FT GD SHP+ + I +L +G L E
Sbjct: 571 FPGCSWIEVEKKVHMFTGGDSKSHPEQHMITQMLEKLSGFLRE 613
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 122/489 (24%), Positives = 217/489 (44%), Gaps = 78/489 (15%)
Query: 25 TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPH 84
++ ++ Y + ++ E+ KLF EMP RNV SW +I +K + A+ LFD P
Sbjct: 114 VVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVVSWTVMIGGLLKESRIDDAKKLFDMIPE 173
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
KD+V +M+ GY G +A +LF EM+ +R + FT T+ ++ K V
Sbjct: 174 KDVVVVTNMIGGYCQV-GRLDEARELFDEMK-----VR-NVFTWTTMVSGYAKNGRVDVA 226
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
R+L M + N+ S ++++ Y++ +EA +FE + +++ N M+
Sbjct: 227 RKLFEVMPE-RNEVSW---TAMLMGYTQSGRMKEAFELFEAMPVKW-IVACNEMILQFGL 281
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFAS 264
GEM A F E D +WN +I + + G E L LF RM GV N + S
Sbjct: 282 AGEMHRARMMFEGMKE-RDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMIS 340
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
LS C L ++ +++H+ ++++ + +V+S ++ +Y KC ++ A KG+ N
Sbjct: 341 VLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRA------KGIFN 394
Query: 325 SFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVT 384
F K+VV+W ++ +GY + E ++ + +
Sbjct: 395 RFLF-------------------------KDVVMWNSMITGYSQHGLGEEALNVFHDMCS 429
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
GV D + + +L AC+ + G EI + KC T
Sbjct: 430 -SGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAM--------------------KC---T 465
Query: 445 YAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR 504
Y +E + Y M+ G ++A+ L E+M ++PDA+ + A+L A R
Sbjct: 466 YQ-------VEPGIEHYACMVDLLGRAGRVDEAMELVEKM---PMEPDAIVWGALLGACR 515
Query: 505 HCGSVEMGE 513
+ +++ E
Sbjct: 516 NHMKLDLAE 524
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 82/189 (43%), Gaps = 14/189 (7%)
Query: 431 STLVDMYSKCGNMTYAEIIFQN--FIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
++ + Y + G++ A +F N +R + +N M++ Y A+LLF++M ++
Sbjct: 23 TSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMPQR- 81
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
+ V+F ++S + G V K F+ M +S + M+ Y + +E+A
Sbjct: 82 ---NTVSFNGMISGYVKNGMVADARKVFDVMPERNVVS-----WTSMVRGYVQEGMVEEA 133
Query: 549 IEFMKSIPTEED---AVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVY 605
+ +P V++G L R++ +L EK + + N Y Q+ +
Sbjct: 134 EKLFWEMPRRNVVSWTVMIGGLLKESRIDDAKKLFDMIPEKDVVVVTNMIGGYCQVGRLD 193
Query: 606 AAEGNWAEM 614
A + EM
Sbjct: 194 EARELFDEM 202
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 189/597 (31%), Positives = 296/597 (49%), Gaps = 56/597 (9%)
Query: 81 SSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLN 140
+SP + ++ L + + +A+ +IEM + R D F + L L +
Sbjct: 51 TSPSRSTASWVDALRSRTRSNDFR-EAISTYIEMTVSGA--RPDNFAFPAVLKAVSGLQD 107
Query: 141 VGFGRQLHAFMVKTSNDASGFAVS-SLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMV 199
+ G Q+HA VK +S V+ +L++MY KC G ++ + NA++
Sbjct: 108 LKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKC----------GGIGDKT--FTNNALM 155
Query: 200 AACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNE 259
A + G ++ + K + D VSWNT+IS + Q+ E L F M GV +
Sbjct: 156 AMYAKLGRVDDS-KALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDG 214
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNG-LISNPFVSSGIVDVYCKCENMNYAESMLL 318
T AS L AC L + KEIH++VL+N LI N FV S +VD+YC C
Sbjct: 215 VTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCR---------- 264
Query: 319 LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDL 378
+E RR FD + + + +W A+ SGY + E L
Sbjct: 265 ---------------------QVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALIL 303
Query: 379 LSEFVTKEGVVTDALILVILLGACALQ-AALHPGKEIHAYILRMGVQMDKKLISTLVDMY 437
E + G++ + + ++ AC AA+ GKEIHAY +R + D + S LVDMY
Sbjct: 304 FIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMY 363
Query: 438 SKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG-----IKPD 492
+KCG + + +F ++++ +NV+I HG E+A+ LF+ M+ + KP+
Sbjct: 364 AKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPN 423
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
VTF+ + +A H G + G F M D+ + P +DHYAC++DL GRA QLE+A E +
Sbjct: 424 EVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELV 483
Query: 553 KSIPTEEDAV-ILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNW 611
++P E D V S L CR+++N EL A + LL LE N + YV L+N+Y++ G W
Sbjct: 484 NTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLW 543
Query: 612 AEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
+ +RK MR M + GCSW+ E+H F GDVSHP++ ++ L + ++
Sbjct: 544 NKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKM 600
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 129/550 (23%), Positives = 214/550 (38%), Gaps = 151/550 (27%)
Query: 19 AGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSL 78
G+ T T N L+ +Y+K + +S+ LF+ +R++ SWNT+IS+ +S +A +
Sbjct: 142 GGIGDKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAF 201
Query: 79 FDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKL 138
F +L + E + +D T+ S L C L
Sbjct: 202 F-----------------------------RLMVL-----EGVELDGVTIASVLPACSHL 227
Query: 139 LNVGFGRQLHAFMVKTSND--ASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKN 196
+ G+++HA++++ +ND + F S+L+DMY CR E RVF+
Sbjct: 228 ERLDVGKEIHAYVLR-NNDLIENSFVGSALVDMYCNCRQVESGRRVFD------------ 274
Query: 197 AMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE-NGV 255
R+ EL WN +ISGY +NG E+ L LF+ M + G+
Sbjct: 275 ----------------HILGRRIEL-----WNAMISGYARNGLDEKALILFIEMIKVAGL 313
Query: 256 RWNEHTFASALSACC-GLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
N T AS + AC L + KEIH++ ++N L S+ V S +VD+Y KC +N
Sbjct: 314 LPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNL-- 371
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEA 374
+RR F+ + KNV+ W L E
Sbjct: 372 -----------------------------SRRVFNEMPNKNVITWNVLIMACGMHGKGEE 402
Query: 375 LFDLLSEFVTKEGVVTDA----LILVILLGACALQAALHPGKEIHAYILRM----GVQMD 426
+L V + G +A + + + AC+ + G + RM GV+
Sbjct: 403 ALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNL---FYRMKHDHGVEPT 459
Query: 427 KKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
+ +VD+ + G + E L N M A + G
Sbjct: 460 SDHYACVVDLLGRAGQL-----------EEAYELVNTMPAEFDKVG-------------- 494
Query: 487 KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE-TDHYACMIDLYGRANQL 545
+ ++L A R +VE+GE ++ + P HY + ++Y A
Sbjct: 495 --------AWSSLLGACRIHQNVELGEVAAKNL---LHLEPNVASHYVLLSNIYSSAGLW 543
Query: 546 EKAIEFMKSI 555
KA+E K++
Sbjct: 544 NKAMEVRKNM 553
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H AI+ L + L+ +Y+K L SR++F+EMP +NV +WN +I AC
Sbjct: 341 HAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKG 400
Query: 73 KQARSLF 79
++A LF
Sbjct: 401 EEALELF 407
>gi|449464272|ref|XP_004149853.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Cucumis sativus]
gi|449520209|ref|XP_004167126.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Cucumis sativus]
Length = 840
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 207/695 (29%), Positives = 339/695 (48%), Gaps = 107/695 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K GL L+ +Y K L E++K+FD++ E+N
Sbjct: 204 HAYVVKMGLGGCIYVATSLLDMYGKCGLCEEAKKVFDKILEKN----------------- 246
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+V +NSM+ + G A+A++ F EM+ E + + T++S L
Sbjct: 247 --------------IVAWNSMIVNFTQ-NGLNAEAVETFYEMRV--EGVAPTQVTLSSFL 289
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ L + G+Q HA V + + + SSLI+ YSK E+A VF E+
Sbjct: 290 SASANLSVIDEGKQGHALAVLSGLELTNILGSSLINFYSKVGLVEDAELVFSEMLEK--- 346
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
D V+WN L+SGYV NG + L L M
Sbjct: 347 ------------------------------DTVTWNLLVSGYVHNGLVDRALDLCHVMQS 376
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN- 311
+R++ T AS ++A RN+K KE HS+ ++N L S+ V+S I+D+Y KCE +
Sbjct: 377 ENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAVASSIIDMYAKCEKLEC 436
Query: 312 ----------------------YAES-----------MLLLKGVR-NSFSISSMIVGYSL 337
YAE + L+G+ N S +S+I+G
Sbjct: 437 ARRVFDATAKRDLIMWNTLLAAYAEQGHSGETLKLFYQMQLEGLPPNVISWNSVILGLLN 496
Query: 338 QGNMEEARRHFDSLTE----KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDAL 393
+G +++A+ F + N++ WT L G + + F L + + + G+ ++L
Sbjct: 497 KGKVDQAKDTFMEMQSLGICPNLITWTTLICGLAQNGLGDEAF-LTFQSMEEAGIKPNSL 555
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF 453
+ LL AC+ A+L G+ IH YI R + + ++ +LV+MY+KCG++ A+ +F
Sbjct: 556 SISSLLSACSTMASLPHGRAIHCYITRHELSVSTPVLCSLVNMYAKCGSINQAKRVFDMI 615
Query: 454 IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
++++L +YN MI+ YA HG +A+ LF + E+ IKPD +TF +ILSA H G V G
Sbjct: 616 LKKELPVYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTSILSACGHAGLVREGL 675
Query: 514 KYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRL 573
+ F M +++KI + +HY C++ + R++ L++A+ + +P E DA I GS L CR
Sbjct: 676 ELFIDMVSNHKIVAQAEHYGCLVSILSRSHNLDEALRIILGMPFEPDAFIFGSLLAACRE 735
Query: 574 NRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCS 633
+ + EL E+LL+LE +N YV L+N YAA G W E ++R M+ ++ G S
Sbjct: 736 HPDFELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEASKVRGLMKERSLSKIPGHS 795
Query: 634 WVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
+ + ++ H+F GD SH +T IY +LA+ E+
Sbjct: 796 LIQIGNKTHVFFAGDKSHSRTKEIYMMLALLRVEM 830
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 113/468 (24%), Positives = 208/468 (44%), Gaps = 76/468 (16%)
Query: 84 HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGF 143
+K + + S LC +G+ +AL L +++ D I D + L CV +
Sbjct: 43 YKSYLNHISSLC----KQGHLLEALDLVTDLELEDITIGPDVYG--ELLQGCVYERALSL 96
Query: 144 GRQLHAFMVKTSNDASG--FAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAA 201
G+Q+H ++K + + + L+ YSKC E A R+F
Sbjct: 97 GQQIHGRILKNGESIAKNEYIETKLVIFYSKCDESEIANRLF------------------ 138
Query: 202 CCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHT 261
G+++ + + SW ++ + G +E L F M E G+ +
Sbjct: 139 ----GKLQ-----------VQNEFSWAAIMGLKSRMGFNQEALMGFREMHEYGLLLDNFV 183
Query: 262 FASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKG 321
A A LR + K +H++V+K GL +V++ ++D+Y KC
Sbjct: 184 IPIAFKASGALRWIGFGKSVHAYVVKMGLGGCIYVATSLLDMYGKC-------------- 229
Query: 322 VRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK-AQNCEALFDLLS 380
G EEA++ FD + EKN+V W ++ + + N EA+
Sbjct: 230 -----------------GLCEEAKKVFDKILEKNIVAWNSMIVNFTQNGLNAEAVETFYE 272
Query: 381 EFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC 440
V EGV + L L A A + + GK+ HA + G+++ L S+L++ YSK
Sbjct: 273 MRV--EGVAPTQVTLSSFLSASANLSVIDEGKQGHALAVLSGLELTNILGSSLINFYSKV 330
Query: 441 GNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAIL 500
G + AE++F +E+D V +N++++ Y H+G ++A+ L M + ++ D+VT +I+
Sbjct: 331 GLVEDAELVFSEMLEKDTVTWNLLVSGYVHNGLVDRALDLCHVMQSENLRFDSVTLASIM 390
Query: 501 SAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
+A ++++G K +S + + + +ID+Y + +LE A
Sbjct: 391 AAAADSRNLKLG-KEGHSFCVRNNLESDVAVASSIIDMYAKCEKLECA 437
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 166/386 (43%), Gaps = 46/386 (11%)
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG- 289
IS + G E L L + + + L C R + ++IH +LKNG
Sbjct: 50 ISSLCKQGHLLEALDLVTDLELEDITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGE 109
Query: 290 -LISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHF 348
+ N ++ + +V Y KC+ A + V+N FS ++++ S G +EA F
Sbjct: 110 SIAKNEYIETKLVIFYSKCDESEIANRLFGKLQVQNEFSWAAIMGLKSRMGFNQEALMGF 169
Query: 349 DSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAAL 408
+ E G++ D ++ I A +
Sbjct: 170 REMHEY--------------------------------GLLLDNFVIPIAFKASGALRWI 197
Query: 409 HPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACY 468
GK +HAY+++MG+ + ++L+DMY KCG A+ +F +E+++V +N MI +
Sbjct: 198 GFGKSVHAYVVKMGLGGCIYVATSLLDMYGKCGLCEEAKKVFDKILEKNIVAWNSMIVNF 257
Query: 469 AHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE 528
+G +A+ F EM +G+ P VT + LSA + ++ G K +++ +
Sbjct: 258 TQNGLNAEAVETFYEMRVEGVAPTQVTLSSFLSASANLSVIDEG-KQGHALAVLSGLELT 316
Query: 529 TDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAV----ILGSFLNVCRLNRNAELAGEAE 584
+ +I+ Y + +E A E + S E+D V ++ +++ ++R +L +
Sbjct: 317 NILGSSLINFYSKVGLVEDA-ELVFSEMLEKDTVTWNLLVSGYVHNGLVDRALDLCHVMQ 375
Query: 585 EKLLRLEGNNKARYVQLANVYAAEGN 610
+ LR + V LA++ AA +
Sbjct: 376 SENLRFDS------VTLASIMAAAAD 395
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 164/389 (42%), Gaps = 75/389 (19%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTI 62
S NLK H ++ L + +I +Y+K L +R++FD +R++ WNT+
Sbjct: 396 SRNLKLGKEGHSFCVRNNLESDVAVASSIIDMYAKCEKLECARRVFDATAKRDLIMWNTL 455
Query: 63 ISACIKSHDLKQARSLF-----DSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQS- 116
++A + + LF + P +++++NS++ G +N +G A F+EMQS
Sbjct: 456 LAAYAEQGHSGETLKLFYQMQLEGLP-PNVISWNSVILGLLN-KGKVDQAKDTFMEMQSL 513
Query: 117 ---------------------ADEH-----------IRMDEFTVTSTLNLCVKLLNVGFG 144
DE I+ + +++S L+ C + ++ G
Sbjct: 514 GICPNLITWTTLICGLAQNGLGDEAFLTFQSMEEAGIKPNSLSISSLLSACSTMASLPHG 573
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
R +H ++ + S + SL++MY+KC +A RVF
Sbjct: 574 RAIHCYITRHELSVSTPVLCSLVNMYAKCGSINQAKRVF--------------------- 612
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFAS 264
+M LK + +N +ISGY +G A E L LF R+ E ++ +E TF S
Sbjct: 613 ----DMILK--------KELPVYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTS 660
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG-IVDVYCKCENMNYAESMLL-LKGV 322
LSAC V+ E+ ++ N I G +V + + N++ A ++L +
Sbjct: 661 ILSACGHAGLVREGLELFIDMVSNHKIVAQAEHYGCLVSILSRSHNLDEALRIILGMPFE 720
Query: 323 RNSFSISSMIVGYSLQGNMEEARRHFDSL 351
++F S++ + E R F+ L
Sbjct: 721 PDAFIFGSLLAACREHPDFELKERLFERL 749
>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
Length = 693
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 189/656 (28%), Positives = 318/656 (48%), Gaps = 106/656 (16%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K GL + L+++Y+K + ++ KLFDE P+R+V WN +IS K
Sbjct: 129 HNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYFKDGKA 188
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+ A FD K+L G+E +++ T T +
Sbjct: 189 EMALKTFDKM--KEL--------------GFEPNSV------------------TFTVVV 214
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C +LLN+ G+++H +++ F +S+L+DMY KC C E A VFE
Sbjct: 215 SSCTRLLNLERGKEVHRELIERRILLDAFVLSALVDMYGKCGCLEMAKEVFE-------- 266
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+ P N A++WN +I+GY GD+ ++L +RM +
Sbjct: 267 ------------------------KIPRKN-AITWNAMITGYSLKGDSRSCIELLMRMND 301
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G + T S + A ++ K IH ++L+N + + F+ ++D Y KC ++
Sbjct: 302 EGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSS 361
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN- 371
AE++ F ++++ VV W + SG+V N
Sbjct: 362 AETI-------------------------------FRTISKNEVVSWNVMISGHVMVGNH 390
Query: 372 CEAL--FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
+AL +D + E K DAL L AC+ AAL G+E+H I+ ++ ++ +
Sbjct: 391 IQALHIYDNMKEHHVK----PDALTFSSTLSACSQLAALDKGRELHYCIINHKLEANEIV 446
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+ L+DMY+KCG++ A +F +RDLV + MI Y HG +A+ LF+EM + +
Sbjct: 447 MGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIFAYGSHGQASEALRLFDEMQKLNV 506
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
+ D+VTF+A+LSA H G V+ G YFN M Y I P +HY+C+IDL GRA +L +A
Sbjct: 507 RADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQYDIKPGIEHYSCLIDLLGRAGRLHEAY 566
Query: 550 EFM-KSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAE 608
E + +S T D +L + + C L+ N L + + L+ ++ ++ + Y+ L+N+YA+
Sbjct: 567 EILQRSKETRSDIGLLSTLFSACLLHNNFVLGIQIGKMLIEVDPDDPSTYILLSNMYASV 626
Query: 609 GNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIF 664
W E+ ++R++M+ + + GCSW+ + IH F D S+P + +Y L I
Sbjct: 627 NKWDEVRKVRRKMKELGLKKSPGCSWIEINQRIHPFFAEDKSNPLADGVYECLNIL 682
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/516 (25%), Positives = 248/516 (48%), Gaps = 69/516 (13%)
Query: 45 RKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK-DLVTYNSMLCGYINAEGY 103
+++F + N+ ++I HD A +F ++ D+ +N++L Y N +
Sbjct: 27 QRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVFQTNDCPLDVSLWNALLSAYTNNFRF 86
Query: 104 EADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV 163
+AL+LF ++ + + ++R D +T L C L V +GR++H ++KT F
Sbjct: 87 -VEALQLFDQL-NCNSYVRPDFYTYPVVLKACGGLGRVIYGRRIHNHLLKTGLIWDVFVG 144
Query: 164 SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELND 223
SSL++MY+KC + +A ++F+ + D
Sbjct: 145 SSLMNMYAKCDQFVDAIKLFDEFPQR---------------------------------D 171
Query: 224 AVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHS 283
WN +IS Y ++G AE LK F +M E G N TF +S+C L N++ KE+H
Sbjct: 172 VGCWNAVISCYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHR 231
Query: 284 WVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEE 343
+++ ++ + FV S +VD+Y KC + A+ + +N+ + ++MI GYSL+G+
Sbjct: 232 ELIERRILLDAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGD--- 288
Query: 344 ARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACA 403
+++C L +++ TK ++T L ++ A +
Sbjct: 289 -------------------------SRSCIELLMRMNDEGTKPTLMT----LTSIIYASS 319
Query: 404 LQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNV 463
L GK IH YILR + +D + +L+D Y KCG ++ AE IF+ + ++V +NV
Sbjct: 320 RSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAETIFRTISKNEVVSWNV 379
Query: 464 MIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADY 523
MI+ + G+ +A+ +++ M E +KPDA+TF + LSA +++ G + + ++
Sbjct: 380 MISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACSQLAALDKGRE-LHYCIINH 438
Query: 524 KISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE 559
K+ ++D+Y + +++A + +P +
Sbjct: 439 KLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRD 474
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 108/443 (24%), Positives = 179/443 (40%), Gaps = 76/443 (17%)
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
MD T+ S L C + G+ +H + ++ SLI Y C Y A V
Sbjct: 1 MDYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELV 60
Query: 183 FE--GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
F+ C +V+L WN L+S Y N
Sbjct: 61 FQTNDCPLDVSL----------------------------------WNALLSAYTNNFRF 86
Query: 241 EEGLKLFVRMGENG-VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
E L+LF ++ N VR + +T+ L AC GL V + IH+ +LK GLI + FV S
Sbjct: 87 VEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVIYGRRIHNHLLKTGLIWDVFVGSS 146
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
++++Y KC+ +A + FD +++V W
Sbjct: 147 LMNMYAKCD-------------------------------QFVDAIKLFDEFPQRDVGCW 175
Query: 360 TALFSGYVKAQNCE---ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHA 416
A+ S Y K E FD + E G +++ +++ +C L GKE+H
Sbjct: 176 NAVISCYFKDGKAEMALKTFDKMKEL----GFEPNSVTFTVVVSSCTRLLNLERGKEVHR 231
Query: 417 YILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
++ + +D ++S LVDMY KCG + A+ +F+ ++ + +N MI Y+ G
Sbjct: 232 ELIERRILLDAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRS 291
Query: 477 AILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMI 536
I L M ++G KP +T +I+ A + G K+ + +I + +I
Sbjct: 292 CIELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRHG-KFIHGYILRNRIDVDIFIDVSLI 350
Query: 537 DLYGRANQLEKAIEFMKSIPTEE 559
D Y + + A ++I E
Sbjct: 351 DFYFKCGYVSSAETIFRTISKNE 373
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 131/337 (38%), Gaps = 104/337 (30%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R LNL+ H + I+ + L + L+ +Y K L ++++F+++P +N +WN
Sbjct: 219 RLLNLERGKEVHRELIERRILLDAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNA 278
Query: 62 IISACIKSHDLKQARSLF----DSSPHKDLVTYNSML----------------------- 94
+I+ D + L D L+T S++
Sbjct: 279 MITGYSLKGDSRSCIELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNR 338
Query: 95 -----------------CGYINAE-------------------------GYEADALKLFI 112
CGY+++ G AL ++
Sbjct: 339 IDVDIFIDVSLIDFYFKCGYVSSAETIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYD 398
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
M+ + H++ D T +STL+ C +L + GR+LH ++ +A+ + +L+DMY+K
Sbjct: 399 NMK--EHHVKPDALTFSSTLSACSQLAALDKGRELHYCIINHKLEANEIVMGALLDMYAK 456
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C G+++ A K F + P+ D VSW ++I
Sbjct: 457 C--------------------------------GDVDEARKLFHQLPK-RDLVSWTSMIF 483
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
Y +G A E L+LF M + VR + TF + LSAC
Sbjct: 484 AYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSAC 520
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 182/599 (30%), Positives = 304/599 (50%), Gaps = 40/599 (6%)
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
L A SLF P+ N +L + E + L L++ ++ +D F+
Sbjct: 65 LDYALSLFSHIPNPPTRFSNQLLRQFSRGPTPE-NTLSLYLHLRRNG--FPLDRFSFPPL 121
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSN-DASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L KL + G ++H K A F S+LI MY+ C +A +F+ +
Sbjct: 122 LKAVSKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHR- 180
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
D V+WN +I GY QN + LKL+ M
Sbjct: 181 --------------------------------DVVTWNIMIDGYSQNAHYDHVLKLYEEM 208
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
+G + + LSAC N+ K IH ++ NG + + +V++Y C M
Sbjct: 209 KTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAM 268
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA- 369
+ A + ++ ++M+ GY+ G +++AR FD + EK++V W+A+ SGY ++
Sbjct: 269 HLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESY 328
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
Q EAL L +E + + +V D + ++ ++ ACA AL K IH Y + G +
Sbjct: 329 QPLEAL-QLFNE-MQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPI 386
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+ L+DMY+KCGN+ A +F+N ++++ ++ MI +A HG + AI LF M E+ I
Sbjct: 387 NNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNI 446
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
+P+ VTF+ +L A H G VE G+K+F+SM +++ISP+ +HY CM+DLY RAN L KA+
Sbjct: 447 EPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAM 506
Query: 550 EFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEG 609
E ++++P + +I GS ++ C+ + EL A +LL LE ++ V L+N+YA E
Sbjct: 507 ELIETMPFPPNVIIWGSLMSACQNHGEIELGEFAATRLLELEPDHDGALVVLSNIYAKEK 566
Query: 610 NWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
W ++G +RK M+ ++ CS + V +E+H+F + D H +++ IY L +L
Sbjct: 567 RWDDVGLVRKLMKHKGVSKEKACSRIEVNNEVHVFMMADRYHKQSDEIYKKLDAVVSQL 625
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 123/240 (51%), Gaps = 19/240 (7%)
Query: 20 GLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLF 79
G + + L+++Y+ + +R+++D++P +++ ++S K ++ AR +F
Sbjct: 247 GFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIF 306
Query: 80 DSSPHKDLVTYNSMLCGYINAEGYEA-DALKLFIEMQSADEHIRMDEFTVTSTLNLCVKL 138
D KDLV +++M+ GY AE Y+ +AL+LF EMQ I D+ T+ S ++ C +
Sbjct: 307 DRMVEKDLVCWSAMISGY--AESYQPLEALQLFNEMQR--RRIVPDQITMLSVISACANV 362
Query: 139 LNVGFGRQLHAFMVKTSNDASGFAVS-----SLIDMYSKCRCYEEACRVFEGCTEEVNLI 193
G + A + T D +GF + +LIDMY+KC +A VFE + N+I
Sbjct: 363 -----GALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRK-NVI 416
Query: 194 SKNAMVAACCREGEMEMALKTFWRQPELN---DAVSWNTLISGYVQNGDAEEGLKLFVRM 250
S ++M+ A G+ + A+ F R E N + V++ ++ G EEG K F M
Sbjct: 417 SWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSM 476
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 83/209 (39%), Gaps = 39/209 (18%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L +A H A K G T N LI +Y+K L ++R++F+ MP +NV SW+++I+A
Sbjct: 365 LVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINA 424
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINA---EGYEADALKLFIEMQSADEHIR 122
D A +LF +++ G + A G + K F M +EH
Sbjct: 425 FAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSM--INEH-- 480
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
+ R+ + MV D+Y + +A +
Sbjct: 481 -----------------RISPQREHYGCMV---------------DLYCRANHLRKAMEL 508
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMA 211
E N+I ++++AC GE+E+
Sbjct: 509 IETMPFPPNVIIWGSLMSACQNHGEIELG 537
>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 697
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 198/667 (29%), Positives = 321/667 (48%), Gaps = 104/667 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K GL + + + L+ +Y+K N + KLFDEM
Sbjct: 129 HTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEM--------------------- 167
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
P KD+ +N+++ Y + +E +AL+ F M+ D T+T+ +
Sbjct: 168 ----------PDKDVACWNTVISCYYQSGKFE-EALRYFGMMRRFG--FEPDSVTITTAI 214
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C +LL++ GR++H +V + F ++L+DMY KC
Sbjct: 215 SSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMYGKC------------------- 255
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
G++EMA++ F + P V+WN++I+GY GD ++LF RM
Sbjct: 256 -------------GQLEMAIEVFEQMPN-KTVVAWNSMINGYGFKGDGISCIQLFKRMYS 301
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
GV+ T S L AC + K +H ++++N + + F++S ++D+Y KC
Sbjct: 302 EGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKC----- 356
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G +E A F + + V W + SGYV
Sbjct: 357 --------------------------GKVESAETIFKLMPKTTTVSWNVMISGYVTEGK- 389
Query: 373 EALFDLLSEF--VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
LFD L F ++K V DA+ +L AC+ AAL G+EIH I+ + ++ ++
Sbjct: 390 --LFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVM 447
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
L+DMY+KCG + A +F+ ERDLV + MI Y HG +A+ LF EML+ +K
Sbjct: 448 GALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVK 507
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
PD VTF+AILSA H G V+ G +FN M Y I P +HY+C+I L GRA +L +A E
Sbjct: 508 PDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYE 567
Query: 551 FMKSIP-TEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEG 609
++S P +D +L + + CRL++N +L E E L+ + ++ + Y+ L+N+YA+ G
Sbjct: 568 ILQSNPEISDDFQLLSTLFSACRLHKNLDLGVEIAENLIDKDPDDSSTYIILSNMYASFG 627
Query: 610 NWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELY 669
W E+ +R +M+ + + GCSW+ + +I F V D SH I ++L+ T +
Sbjct: 628 KWDEVRMVRSKMKDLGLKKNPGCSWIEINEKIVPFFVEDNSHYHLEGIGNILSYLTSHME 687
Query: 670 EIAGAFY 676
+ Y
Sbjct: 688 DECKPIY 694
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 89/174 (51%), Gaps = 5/174 (2%)
Query: 391 DALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIF 450
DA L+ LL A +L GK +H ++ +G+Q D + L+ +Y C YA+ +F
Sbjct: 2 DARKLIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVF 61
Query: 451 QNFIER--DLVLYNVMIACYAHHGHEEKAILLFEEML-EKGIKPDAVTFVAILSAFRHCG 507
+ IE ++ L N ++A Y + ++A+ LF++++ +KPD+ T+ ++L A
Sbjct: 62 -DVIENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLR 120
Query: 508 SVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDA 561
V +G+ + + + + + ++ +Y + N+ E A++ +P ++ A
Sbjct: 121 RVVLGQMIHTCLVKE-GLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVA 173
>gi|357447703|ref|XP_003594127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124365519|gb|ABN09753.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483175|gb|AES64378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 189/626 (30%), Positives = 320/626 (51%), Gaps = 14/626 (2%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H K GL T N LI++Y+K ++ ++ LFD + S N ++S +++ +
Sbjct: 76 HSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLFDGFATLDSVSCNIMVSGYVRNGQI 135
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
AR LFD P+K V+Y +M+ G++ G+ +AL++F +M+S + ++ T+ + +
Sbjct: 136 DNARKLFDVMPNKGCVSYTTMIMGFVQ-NGFFREALEVFKDMRSCG--VVPNDLTLVNVI 192
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C L V R +H +VK ++L+ Y C EA R+F+ E NL
Sbjct: 193 SACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVREARRLFDEMPER-NL 251
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
++ N M+ + G ++ A + F + D +SW T+I GY+Q G E L+++ M +
Sbjct: 252 VTWNVMLNGYAKTGLVDEARELFDGICD-KDVISWGTMIDGYIQKGRLREALEIYRAMLQ 310
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G NE + +SAC + ++H V+K G F+ + I+ Y C M+
Sbjct: 311 TGHGPNEVMIVNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDL 370
Query: 313 AESMLLLKGVRNSF-SISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
A + GV++ S +++ G+ G M+ A + FD + ++V W+ + SGY ++++
Sbjct: 371 A-CLQFEVGVKDHLESWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEH 429
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
+ +L + + G+ + + +V + A A L GK H Y+ + + L +
Sbjct: 430 PKMALELFHKMLAG-GIKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSESIPFNDNLRA 488
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLV----LYNVMIACYAHHGHEEKAILLFEEMLEK 487
L+DMY+KCG++ A F RD V +N +I A HGH + +F +M
Sbjct: 489 ALIDMYAKCGSINSALQFFNQI--RDEVSSVSPWNAIICGLASHGHASMCLEVFSDMQRF 546
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEK 547
IKP+ +TF+ +LSA H G VE G++ F +M + Y + P+ HY CMID+ GRA LE+
Sbjct: 547 HIKPNPITFIGVLSACCHAGLVESGKRIFKTMKSAYNVEPDIKHYGCMIDILGRAGLLEE 606
Query: 548 AIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAA 607
A E ++S+P E D VI G+ L CR + N + A E L RL ++ V L+N+YA
Sbjct: 607 AEEMIRSMPMEADIVIWGTLLAACRTHGNVNIGERAAENLARLAPSHGGGKVLLSNIYAN 666
Query: 608 EGNWAEMGRIRKQMRGMKGNRFAGCS 633
G W E+ +R M+G +R G S
Sbjct: 667 AGKWEEVSFVRSVMQGQTMDREPGYS 692
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 130/469 (27%), Positives = 227/469 (48%), Gaps = 35/469 (7%)
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
E + S L C L + GRQ+H+ + K + F +SLI+MY+KC + A +F+
Sbjct: 53 ELALVSALKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLFD 112
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
G ++ +S N MV+ R G+++ A K F P VS+ T+I G+VQNG E L
Sbjct: 113 GFA-TLDSVSCNIMVSGYVRNGQIDNARKLFDVMPN-KGCVSYTTMIMGFVQNGFFREAL 170
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
++F M GV N+ T + +SAC L V + +H V+K ++ VS+ ++ Y
Sbjct: 171 EVFKDMRSCGVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAY 230
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
C C + A + RN + + M+ GY+ G ++EAR FD + +K+V+ W +
Sbjct: 231 CLCSGVREARRLFDEMPERNLVTWNVMLNGYAKTGLVDEARELFDGICDKDVISWGTMID 290
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
GY++ ++ + + G + +++V L+ AC A+ G ++H +++ G
Sbjct: 291 GYIQKGRLREALEIYRAML-QTGHGPNEVMIVNLVSACGRGTAIVDGWQLHGTVVKRGFD 349
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQ---------------NFIE-------------- 455
+ +T++ Y+ CG M A + F+ FI+
Sbjct: 350 CYNFIQTTIIYFYAACGMMDLACLQFEVGVKDHLESWNALTAGFIKNGMMDHALKTFDKM 409
Query: 456 --RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
RD+ ++ MI+ YA H + A+ LF +ML GIKP+ VT V++ SA G+++ G+
Sbjct: 410 HVRDVFSWSTMISGYAQSEHPKMALELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQEGK 469
Query: 514 KYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAV 562
M ++ I + A +ID+Y + + A++F I E +V
Sbjct: 470 LAHEYMRSE-SIPFNDNLRAALIDMYAKCGSINSALQFFNQIRDEVSSV 517
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 130/262 (49%), Gaps = 5/262 (1%)
Query: 258 NEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESML 317
+E SAL +C L + ++IHS + K GL N F+ + ++++Y KC ++ A+ +
Sbjct: 52 SELALVSALKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLF 111
Query: 318 LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFD 377
+S S + M+ GY G ++ AR+ FD + K V +T + G+V+ +
Sbjct: 112 DGFATLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALE 171
Query: 378 LLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMY 437
+ + + GVV + L LV ++ AC+ + + +H +++M V + + L+ Y
Sbjct: 172 VFKD-MRSCGVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAY 230
Query: 438 SKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFV 497
C + A +F ER+LV +NVM+ YA G ++A LF+ + +K D +++
Sbjct: 231 CLCSGVREARRLFDEMPERNLVTWNVMLNGYAKTGLVDEARELFDGICDK----DVISWG 286
Query: 498 AILSAFRHCGSVEMGEKYFNSM 519
++ + G + + + +M
Sbjct: 287 TMIDGYIQKGRLREALEIYRAM 308
>gi|449437737|ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Cucumis sativus]
Length = 649
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 200/629 (31%), Positives = 312/629 (49%), Gaps = 63/629 (10%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
NV N +I+ K + +AR +F+ P +D+V++ +++ GYI G +A LF
Sbjct: 65 NVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKC-GMIEEAKTLF--- 120
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVS--SLIDMYSK 172
NDA V+ +L+ Y +
Sbjct: 121 ---------------------------------------DRNDAIKNVVTWTALVSGYVR 141
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
EEA R+F+ + N+IS N M+ R+G ++ AL F + PE N VSWNT+I+
Sbjct: 142 WNRIEEARRLFDAMPVK-NVISWNTMIEGYARKGWIDQALDLFEKMPERN-VVSWNTVIT 199
Query: 233 GYVQNGDAEEGLKLFVRMGENGV-RWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI 291
++Q +E +LF RM E V W T + LS + + + +L + +
Sbjct: 200 AFMQRRRVDEAQELFNRMPERDVISWT--TMVAGLSKNGRIDDAR--------LLFDKMP 249
Query: 292 SNPFVSSGIVDVYCKCENMNYAESMLLLKGV--RNSFSISSMIVGYSLQGNMEEARRHFD 349
VS + + +NM E+ L + + R S ++MI G+ G +E A F
Sbjct: 250 VRNVVSWNTM-IIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFY 308
Query: 350 SLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALH 409
++ KNVV WTA+ SG+V+ E + SE V + V +LGAC+ AAL
Sbjct: 309 KMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLGACSKLAALC 368
Query: 410 PGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQN--FIERDLVLYNVMIAC 467
G++IH I + Q ++S L++MYSKCG + A IF + RD+V +N MIA
Sbjct: 369 EGQQIHQIISKTVYQEVADVVSALINMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAA 428
Query: 468 YAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISP 527
YAHHGH KAI LF+EM G +PD VT++A+LSA H G V+ G K F ++ D I
Sbjct: 429 YAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKL 488
Query: 528 ETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKL 587
DH+ C++DL+GRA +L++A +F+K + + A + + L C ++ + +L EKL
Sbjct: 489 REDHFTCLVDLFGRAGRLQEAFDFIKGLEVKPSASVWAALLAGCNVHGHIDLGKLTAEKL 548
Query: 588 LRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVG 647
L E N Y+ L+N+YA+ G W E +R +M+ + GCSW+ V + +H+F VG
Sbjct: 549 LETEPENAGTYLVLSNIYASTGKWREAAGVRMKMKDKGLKKQPGCSWIEVGNTVHVFVVG 608
Query: 648 DVSHPKTNAIYSVLAIFTGELYEIAGAFY 676
D SH + IY +L ++ +I Y
Sbjct: 609 DNSHREFENIYLLLHDLHTKMKKIGHTLY 637
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/466 (25%), Positives = 212/466 (45%), Gaps = 50/466 (10%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
+T L+ Y + N + E+R+LFD MP +NV SWNT+I + + QA LF+ P +
Sbjct: 130 VTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEKMPER 189
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR 145
++V++N+++ ++ + +A +LF RM E V S + L G
Sbjct: 190 NVVSWNTVITAFMQRRRVD-EAQELF---------NRMPERDVISWTTMVAGLSKNGRID 239
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
K + + +++I Y++ +EA ++FE E L S N M+ +
Sbjct: 240 DARLLFDKMPV-RNVVSWNTMIIGYAQNMRLDEAFKLFEQMPER-ELSSWNTMITGFIQN 297
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM-GENGVRWNEHTFAS 264
G++E A+ F++ N V+W +ISG+VQ+G +EE LK+F M N V+ NE TF S
Sbjct: 298 GKLERAVDFFYKMSNKN-VVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVS 356
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
L AC L + ++IH + K V S ++++Y KC
Sbjct: 357 VLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKC----------------- 399
Query: 325 SFSISSMIVGYSLQGNMEEARRHFD--SLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF 382
G +E AR+ FD S+ ++VV W + + Y + L E
Sbjct: 400 --------------GELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDE- 444
Query: 383 VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR-MGVQMDKKLISTLVDMYSKCG 441
+ G D + + LL AC+ + G ++ ++R +++ + + LVD++ + G
Sbjct: 445 MQALGFRPDNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRAG 504
Query: 442 NMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
+ A + ++ ++ ++A HGH + L E++LE
Sbjct: 505 RLQEAFDFIKGLEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLE 550
>gi|255551485|ref|XP_002516788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543876|gb|EEF45402.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 710
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 188/634 (29%), Positives = 322/634 (50%), Gaps = 8/634 (1%)
Query: 4 LNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
L L + H K+GL N LI++Y K LL +++ +FD P + S+N +I
Sbjct: 80 LFLSQGKQIHCLVSKSGLGSNNFIQNSLINMYGKCGLLVDAKSIFDVCPRSDPVSYNVMI 139
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
S +KS L A LFD P K V+Y +M+ G+ E + A++LF +M++ +
Sbjct: 140 SGYVKSGQLDYACELFDEMPVKGCVSYTTMIMGFSQNECWN-QAVELFKQMRNVG--VVP 196
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
+E T+ + ++ + R LH ++K + ++L+ MY C EA +F
Sbjct: 197 NEVTIATLVSAYSHFGGIWACRMLHGLVIKMLFEEFVLVSTNLLRMYCVCSSLVEARALF 256
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
+ E+ N++S N M+ + G ++ A F R P D V+W T+I GYV+ E
Sbjct: 257 DEMPEK-NIVSWNVMLNGYSKAGFVDSARVVFERIPN-KDLVTWGTIIDGYVRVERINEA 314
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
L ++ M G N+ +S C + +++ S V+K G F+ S I+ +
Sbjct: 315 LMMYRSMISAGWEPNDVMMVDLISGCGRTMAMTEGQQLLSAVVKMGFDCYDFIQSTIIHL 374
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y C +N A + N S +++I GY ++ A F+ + E++V W+ +
Sbjct: 375 YAACGRINEACLQFRIGSKENVASWNALIAGYVRNRMIDRAMELFNEMPERDVFSWSTMI 434
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
SGY + + +L + V G+ + + +V +L A A L G+ H Y+ +
Sbjct: 435 SGYTQNEQPNLALELFHKMVAS-GIKPNEVTMVSVLSAIATSGTLKEGRWAHEYVHNNSI 493
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL--YNVMIACYAHHGHEEKAILLF 481
+ L + ++DMY+KCG++ A +F E+ + +N +I A HGH ++ +F
Sbjct: 494 TVSDNLSAAIIDMYAKCGSINNALEVFYEIREKASTVSPWNAIICGLAVHGHANLSLKIF 553
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGR 541
++ + IK +A+TF+ +L+A H G VE G+++F SM +++ I P+ HY CM+DL GR
Sbjct: 554 SDLERRHIKLNAITFIGVLTACCHVGLVESGKRHFMSMKSEHSIDPDIKHYGCMVDLLGR 613
Query: 542 ANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQL 601
A +LE+A E ++S+P + D VI G+ L CR + N ++ A E L RLE ++ A V L
Sbjct: 614 AGRLEEAEEMIRSMPMKADVVIWGTLLAACRTHGNVDVGERAAENLARLEPSHGASRVLL 673
Query: 602 ANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWV 635
+N+YA G W + +R+ M+ + R G S V
Sbjct: 674 SNMYADAGKWEDAFLVRRAMQSHRMQRLPGYSGV 707
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/470 (25%), Positives = 225/470 (47%), Gaps = 37/470 (7%)
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
E + S L C L + G+Q+H + K+ ++ F +SLI+MY KC +A +F+
Sbjct: 66 ELVLVSALKFCSDHLFLSQGKQIHCLVSKSGLGSNNFIQNSLINMYGKCGLLVDAKSIFD 125
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
C + +S N M++ + G+++ A + F P + VS+ T+I G+ QN + +
Sbjct: 126 VCPRS-DPVSYNVMISGYVKSGQLDYACELFDEMP-VKGCVSYTTMIMGFSQNECWNQAV 183
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
+LF +M GV NE T A+ +SA + + +H V+K VS+ ++ +Y
Sbjct: 184 ELFKQMRNVGVVPNEVTIATLVSAYSHFGGIWACRMLHGLVIKMLFEEFVLVSTNLLRMY 243
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
C C ++ A ++ +N S + M+ GYS G ++ AR F+ + K++V W +
Sbjct: 244 CVCSSLVEARALFDEMPEKNIVSWNVMLNGYSKAGFVDSARVVFERIPNKDLVTWGTIID 303
Query: 365 GYVKAQNC-EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
GYV+ + EAL ++ + G + +++V L+ C A+ G+++ + +++MG
Sbjct: 304 GYVRVERINEAL--MMYRSMISAGWEPNDVMMVDLISGCGRTMAMTEGQQLLSAVVKMGF 361
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEI-------------------------------IFQN 452
+ ST++ +Y+ CG + A + +F
Sbjct: 362 DCYDFIQSTIIHLYAACGRINEACLQFRIGSKENVASWNALIAGYVRNRMIDRAMELFNE 421
Query: 453 FIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMG 512
ERD+ ++ MI+ Y + A+ LF +M+ GIKP+ VT V++LSA G+++ G
Sbjct: 422 MPERDVFSWSTMISGYTQNEQPNLALELFHKMVASGIKPNEVTMVSVLSAIATSGTLKEG 481
Query: 513 EKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAV 562
++ + + I+ + A +ID+Y + + A+E I + V
Sbjct: 482 -RWAHEYVHNNSITVSDNLSAAIIDMYAKCGSINNALEVFYEIREKASTV 530
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1047
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 185/595 (31%), Positives = 299/595 (50%), Gaps = 68/595 (11%)
Query: 67 IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEF 126
+K D+K A F S+ +++V +N ML Y + ++ K+F +MQ E I ++F
Sbjct: 418 VKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLN-ESFKIFTQMQM--EGIEPNQF 474
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
T S L C L V G Q+H ++KT + + S LIDMY+K
Sbjct: 475 TYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKL------------- 521
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
G+++ ALK F R E D VSW +I+GY Q+ E L L
Sbjct: 522 -------------------GKLDHALKIFRRLKE-KDVVSWTAMIAGYAQHEKFAEALNL 561
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
F M + G+ + FASA+SAC G++ + ++IH+ +G + V + +V +Y +
Sbjct: 562 FKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYAR 621
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
C G + +A FD + K+ + W +L SG+
Sbjct: 622 C-------------------------------GKVRDAYFAFDKIFSKDNISWNSLISGF 650
Query: 367 VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMD 426
++ +CE L S+ ++K G ++ + A A A + GK+IHA I++ G +
Sbjct: 651 AQSGHCEEALSLFSQ-MSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSE 709
Query: 427 KKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
++ + L+ +Y+KCGN+ AE F E++ + +N M+ Y+ HGH KA+ LFE+M +
Sbjct: 710 TEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQ 769
Query: 487 KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLE 546
G+ P+ VTFV +LSA H G V+ G KYF SM + + P+ +HYAC++DL GR+ L
Sbjct: 770 LGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLS 829
Query: 547 KAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYA 606
+A F++ +P + DA++ + L+ C +++N ++ A LL LE + A YV L+N+YA
Sbjct: 830 RARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLLELEPKDSATYVLLSNMYA 889
Query: 607 AEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
G W R R+ M+ + G SW+ V + +H F GD HP + IY L
Sbjct: 890 VTGKWGCRDRTRQMMKDRGVKKEPGRSWIEVNNSVHAFFAGDQKHPNVDKIYEYL 944
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 131/539 (24%), Positives = 234/539 (43%), Gaps = 106/539 (19%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + I G + N LI +Y K+ L ++K+FD + +R+ SW ++S +S
Sbjct: 193 HARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQS--- 249
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
G E +A+ LF +M ++ + + +S L
Sbjct: 250 -----------------------------GCEEEAVLLFCQMHTSG--VYPTPYIFSSVL 278
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C K+ G QLH ++K + ++L+ +YS+ + A +VF
Sbjct: 279 SACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVF--------- 329
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
NAM+ D VS+N+LISG Q G +++ L+LF +M
Sbjct: 330 ---NAMLQ---------------------RDEVSYNSLISGLSQQGYSDKALELFKKMCL 365
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+ ++ + T AS LSAC + + K+ HS+ +K G+ S+ + ++D+Y KC ++
Sbjct: 366 DCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKT 425
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
A L N + M+V Y L N+ E+ + F +
Sbjct: 426 AHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQM--------------------- 464
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
EG+ + +L C+ A+ G++IH +L+ G Q + + S
Sbjct: 465 -----------QMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSV 513
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
L+DMY+K G + +A IF+ E+D+V + MIA YA H +A+ LF+EM ++GI D
Sbjct: 514 LIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSD 573
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA---CMIDLYGRANQLEKA 548
+ F + +SA ++ G++ + A +S +D + ++ LY R ++ A
Sbjct: 574 NIGFASAISACAGIQALNQGQQ----IHAQACVSGYSDDLSVGNALVSLYARCGKVRDA 628
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 129/496 (26%), Positives = 217/496 (43%), Gaps = 77/496 (15%)
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
DL A ++FD P + L +N +L ++ A L LF M E ++ DE T
Sbjct: 118 DLDGAVTVFDEMPVRPLSCWNKVLHRFV-AGKMAGRVLGLFRRM--LQEKVKPDERTYAG 174
Query: 131 TLNLCVKLLNVGFG--RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE 188
L C +V F ++HA + + S F + LID+Y K A +VF+G +
Sbjct: 175 VLRGCGGG-DVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQK 233
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
D+VSW ++SG Q+G EE + LF
Sbjct: 234 R---------------------------------DSVSWVAMLSGLSQSGCEEEAVLLFC 260
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
+M +GV + F+S LSAC + K +++H VLK G +V + +V +Y +
Sbjct: 261 QMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLG 320
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
N AE + R+ S +S+I G S QG ++A F +
Sbjct: 321 NFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMC---------------- 364
Query: 369 AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK 428
D L D + + LL AC+ AL GK+ H+Y ++ G+ D
Sbjct: 365 -------LDCLK---------PDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDII 408
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
L L+D+Y KC ++ A F + ++VL+NVM+ Y + ++ +F +M +G
Sbjct: 409 LEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEG 468
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY--ACMIDLYGRANQLE 546
I+P+ T+ +IL +V++GE+ T K + + Y + +ID+Y + +L+
Sbjct: 469 IEPNQFTYPSILRTCSSLRAVDLGEQIH---TQVLKTGFQFNVYVSSVLIDMYAKLGKLD 525
Query: 547 KAIEFMKSIPTEEDAV 562
A++ + + E+D V
Sbjct: 526 HALKIFRRL-KEKDVV 540
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 167/354 (47%), Gaps = 35/354 (9%)
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASA 265
G+++ A+ F P + WN ++ +V A L LF RM + V+ +E T+A
Sbjct: 117 GDLDGAVTVFDEMP-VRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGV 175
Query: 266 LSACCGLR-NVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
L C G C ++IH+ + +G ++ FV + ++D+Y K
Sbjct: 176 LRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFK------------------ 217
Query: 325 SFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVT 384
G + A++ FD L +++ V W A+ SG + CE LL +
Sbjct: 218 -------------NGFLNSAKKVFDGLQKRDSVSWVAMLSG-LSQSGCEEEAVLLFCQMH 263
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
GV I +L AC G+++H +L+ G ++ + + LV +YS+ GN
Sbjct: 264 TSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFI 323
Query: 445 YAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR 504
AE +F ++RD V YN +I+ + G+ +KA+ LF++M +KPD VT ++LSA
Sbjct: 324 PAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACS 383
Query: 505 HCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE 558
G++ +G K F+S +S + ++DLY + + ++ A EF S TE
Sbjct: 384 SVGALLVG-KQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETE 436
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 117/477 (24%), Positives = 200/477 (41%), Gaps = 106/477 (22%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
+R+++L E + H Q +K G ++ LI +Y+K L + K+F + E
Sbjct: 486 LRAVDLGEQI--HTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKE------- 536
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
KD+V++ +M+ GY E + A+AL LF EMQ D+
Sbjct: 537 ------------------------KDVVSWTAMIAGYAQHEKF-AEALNLFKEMQ--DQG 569
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
I D S ++ C + + G+Q+HA + ++L+ +Y++C +A
Sbjct: 570 IHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAY 629
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
F+ + SK D +SWN+LISG+ Q+G
Sbjct: 630 FAFD------KIFSK---------------------------DNISWNSLISGFAQSGHC 656
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
EE L LF +M + G N TF A+SA + NVK K+IH+ ++K G S VS+ +
Sbjct: 657 EEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVL 716
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
+ +Y KC N++ AE +N S ++M+ GYS G+ +A F+ + + V+
Sbjct: 717 ITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNH 776
Query: 361 ALFSGYV---------------------------KAQNCEALFDLLS---------EFVT 384
F G + K ++ + DLL FV
Sbjct: 777 VTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVE 836
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
+ + DA++ LL AC + + G+ +++L + + D L +MY+ G
Sbjct: 837 EMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLLELEPK-DSATYVLLSNMYAVTG 892
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 14/171 (8%)
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
+ GV ++ + LL C G ++H IL+MG + L L+D+Y G++
Sbjct: 61 ERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLD 120
Query: 445 YAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR 504
A +F R L +N ++ + + + LF ML++ +KPD T+ +L R
Sbjct: 121 GAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVL---R 177
Query: 505 HCGSVEMG----EK-YFNSMTADYKISPETDHYAC--MIDLYGRANQLEKA 548
CG ++ EK + ++T Y E + C +IDLY + L A
Sbjct: 178 GCGGGDVPFHCVEKIHARTITHGY----ENSLFVCNPLIDLYFKNGFLNSA 224
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 173/616 (28%), Positives = 303/616 (49%), Gaps = 69/616 (11%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
N+F + I+ K + AR +FD P +D V +N+M+ G+ + Y D++++F++M
Sbjct: 147 NLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGF-SRNSYFEDSIRVFVDM 205
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
D + D T+ + L +L G + K + + ++ LI +YSKC
Sbjct: 206 --LDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKC- 262
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
C+ + + Q + D +S+N +ISGY
Sbjct: 263 -------------------------GKSCKG-------RILFDQIDQPDLISYNAMISGY 290
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
N + E + LF + +G R N T + +++ ++ I + LK G+I P
Sbjct: 291 TFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQP 350
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
VS+ + VYC+ + +A R+ FD EK
Sbjct: 351 SVSTALTTVYCRLNEVQFA-------------------------------RQLFDESPEK 379
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
++ W A+ SGY + + L E + + + + + + +L ACA AL GK +
Sbjct: 380 SLASWNAMISGYTQNGLTDRAISLFQEMMPQ--LSPNPVTVTSILSACAQLGALSIGKWV 437
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
H I ++ + + + LVDMY+KCG++ A +F +++++V +N MI Y HGH
Sbjct: 438 HGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHG 497
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC 534
++A+ LF EML+ GI P VTF++IL A H G V G + F+SM +Y P ++HYAC
Sbjct: 498 KEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYAC 557
Query: 535 MIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNN 594
M+D+ GRA QL A+EF++ +P E + G+ L C +++N E+A A ++L +L+ N
Sbjct: 558 MVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPEN 617
Query: 595 KARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKT 654
YV L+N+Y+ + N+ + +R+ ++ K + GC+ + ++ + ++FT GD SHP+
Sbjct: 618 VGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQA 677
Query: 655 NAIYSVLAIFTGELYE 670
AI+ +L TG++ E
Sbjct: 678 TAIFEMLEKLTGKMRE 693
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 196/640 (30%), Positives = 308/640 (48%), Gaps = 68/640 (10%)
Query: 34 IYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSM 93
IYS NLL +S +LF+ + +W ++I C SH L PH+ L ++ M
Sbjct: 49 IYSHINLLHDSLRLFNTIHFPPALAWKSVIR-CYTSHGL----------PHQSLGSFIGM 97
Query: 94 LCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVK 153
L A G + D S L C L+++ G LH ++++
Sbjct: 98 L-----ASG------------------LYPDHNVFPSVLKSCALLMDLNLGESLHGYIIR 134
Query: 154 TSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALK 213
D + ++L++MYSK R EE+ R G E + +++ + K
Sbjct: 135 VGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRK 194
Query: 214 TFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLR 273
F PE D VSWNT+I+G +NG EE L++ MG ++ + T +S L
Sbjct: 195 IFEMMPE-KDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENV 253
Query: 274 NVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIV 333
++ KEIH ++ GL ++ +V+S ++D+Y KC + + + L R+ S +S+I
Sbjct: 254 DISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIA 313
Query: 334 GYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDAL 393
G G +E R F + + + FS
Sbjct: 314 GCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSS---------------------------- 345
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF 453
++ ACA LH GK++H YI R G + + S+LVDMY+KCGN+ A+ IF
Sbjct: 346 ----IMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRM 401
Query: 454 IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
RD+V + MI A HG AI LFE+M +GIKP+ V F+A+L+A H G V+
Sbjct: 402 RLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAW 461
Query: 514 KYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRL 573
KYFNSMT D+ I+P +HYA + DL GRA +LE+A +F+ + I + L+ CR+
Sbjct: 462 KYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRV 521
Query: 574 NRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCS 633
+ N ++A + ++L ++ NN Y+ LAN+Y+A W E + R MR + + CS
Sbjct: 522 HXNIDMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACS 581
Query: 634 WVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIAG 673
W+ V+++++ F GD SHP I + + EL E G
Sbjct: 582 WIEVKNKVYAFMAGDESHPCYEKIREAMEVLV-ELMEKEG 620
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 203/651 (31%), Positives = 319/651 (49%), Gaps = 66/651 (10%)
Query: 41 LRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINA 100
+ +S ++F + N F NT++ ++ +SP K + Y ML + A
Sbjct: 76 INQSYQIFSHIENPNGFICNTMMKGYMQR-----------NSPCKAIWVYKFMLESNVAA 124
Query: 101 EGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASG 160
+ Y L QS IR+ EF G+ + ++K D+
Sbjct: 125 DNYTYPIL-----FQSCS--IRLAEFD----------------GKCIQDHVLKVGFDSDV 161
Query: 161 FAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPE 220
+ ++LI+MY+ C +A +VF+G + ++++S N+M+A G +E A + R PE
Sbjct: 162 YIQNTLINMYAVCGNLSDARKVFDG-SSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRMPE 220
Query: 221 LN------------------------------DAVSWNTLISGYVQNGDAEEGLKLFVRM 250
N D VSW+ LIS Y QN EE L LF M
Sbjct: 221 RNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEM 280
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
NG+ +E S LSAC L V K +H V+K G+ + + + ++ +Y CE +
Sbjct: 281 NANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEV 340
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
A+ + + S +SMI GY G +E+AR FDS+ +K+ V W+A+ SGY +
Sbjct: 341 VTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQD 400
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
L E EG D ILV ++ AC AAL GK IHAYI + G++++ L
Sbjct: 401 RFTETLVLFQEMQI-EGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILG 459
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+TL++MY K G + A +F+ E+ + +N +I A +G +K++ F EM E G+
Sbjct: 460 TTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVT 519
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
P+ +TFVA+L A RH G V+ G ++FNSM ++KI P HY CM+DL GRA L++A E
Sbjct: 520 PNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEE 579
Query: 551 FMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGN 610
++S+P D G+ L C+ + E KL+ L ++ V L+N+YA++GN
Sbjct: 580 LIESMPMAPDVSTWGALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNIYASKGN 639
Query: 611 WAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
W ++ +R MR + GCS + +H F GD +HP+ I +L
Sbjct: 640 WVDVLEVRGMMRQHGVVKTPGCSMIEAHGRVHEFLAGDKTHPQNEHIEHML 690
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 134/483 (27%), Positives = 226/483 (46%), Gaps = 43/483 (8%)
Query: 22 TLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDS 81
L ++ N ++ Y + E++ ++D MPERNV + N++I K ++++A LF+
Sbjct: 189 VLDMVSWNSMLAGYVLVGNVEEAKDVYDRMPERNVIASNSMIVLFGKKGNVEEACKLFNE 248
Query: 82 SPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNV 141
KDLV++++++ Y E YE +AL LF EM + I +DE V S L+ C +LL V
Sbjct: 249 MKQKDLVSWSALISCYEQNEMYE-EALILFKEMNA--NGIMVDEVVVLSVLSACSRLLVV 305
Query: 142 GFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF-EGCTEEVNLISKNAMVA 200
G+ +H +VK + ++LI MYS C A ++F E C ++ IS N+M++
Sbjct: 306 ITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCC--LDQISWNSMIS 363
Query: 201 ACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEH 260
+ GE+E A F P+ D VSW+ +ISGY Q E L LF M G + +E
Sbjct: 364 GYVKCGEIEKARALFDSMPD-KDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDET 422
Query: 261 TFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLK 320
S +SAC L + K IH+++ KNGL N + + ++++Y K
Sbjct: 423 ILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKL------------- 469
Query: 321 GVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLS 380
G +E+A F L EK V W AL G + S
Sbjct: 470 ------------------GCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFS 511
Query: 381 EFVTKEGVVTDALILVILLGACALQAALHPG-KEIHAYILRMGVQMDKKLISTLVDMYSK 439
E + + GV + + V +LGAC + G + ++ I + + K +VD+ +
Sbjct: 512 E-MKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGR 570
Query: 440 CGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVA 498
G + AE + ++ + D+ + ++ +G E + +++E + PD F
Sbjct: 571 AGMLKEAEELIESMPMAPDVSTWGALLGACKKYGDNETGERIGRKLVE--LHPDHDGFNV 628
Query: 499 ILS 501
+LS
Sbjct: 629 LLS 631
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 127/259 (49%), Gaps = 36/259 (13%)
Query: 11 ICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSH 70
+ H +K G+ N LIH+YS + ++KLF E + SWN++IS +K
Sbjct: 310 LVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCG 369
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
++++AR+LFDS P KD V++++M+ GY + + + L LF EMQ E + DE + S
Sbjct: 370 EIEKARALFDSMPDKDNVSWSAMISGYAQQDRF-TETLVLFQEMQI--EGTKPDETILVS 426
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
++ C L + G+ +HA++ K + ++LI+MY K C E+A VF+G EE
Sbjct: 427 VISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKG-LEEK 485
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
+ + NA++ G ++ +LKT F M
Sbjct: 486 GVSTWNALILGLAMNGLVDKSLKT--------------------------------FSEM 513
Query: 251 GENGVRWNEHTFASALSAC 269
E+GV NE TF + L AC
Sbjct: 514 KEHGVTPNEITFVAVLGAC 532
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 187/636 (29%), Positives = 311/636 (48%), Gaps = 69/636 (10%)
Query: 37 KHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCG 96
KH +L + + D NVF + ++ K + AR +FD P +D V +N+M+ G
Sbjct: 125 KHLMLLHAHSIIDGYGS-NVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMING 183
Query: 97 YINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSN 156
+ ++ D+++LF EM + + +R+D TVT+ L +L + G + +K
Sbjct: 184 LVKNCCFD-DSIQLFREMVA--DGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGF 240
Query: 157 DASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFW 216
+ ++ LI +YSKC G++ A + +
Sbjct: 241 GFCDYVLTGLISLYSKC--------------------------------GDVNTA-RLLF 267
Query: 217 RQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVK 276
R+ D +++N +ISG+ NG E +KLF + +G R + T + ++
Sbjct: 268 RRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLH 327
Query: 277 CAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYS 336
A IH + +K+G+I NP VS+ +Y K ++ A
Sbjct: 328 LACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLA----------------------- 364
Query: 337 LQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILV 396
R FD EK VV W A+ SGY + + E L E + E +A+ +
Sbjct: 365 --------RHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTE-FTPNAVTIT 415
Query: 397 ILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER 456
+L ACA +L GK +H I ++ + + + LVDMY+KCGN++ A +F + E+
Sbjct: 416 TILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEK 475
Query: 457 DLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYF 516
+ V +N MI Y HG+ +A+ L+ EML G P AVTF+++L A H G V GE+ F
Sbjct: 476 NTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIF 535
Query: 517 NSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRN 576
++M Y+I P +HYACM+D+ GR+ QLEKA+EF+K +P E + G+ L C ++++
Sbjct: 536 HNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKD 595
Query: 577 AELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVY 636
++A A E+L L+ + YV L+N+Y+ E N+ + IR+ ++ K + GC+ +
Sbjct: 596 TDIARLASERLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIE 655
Query: 637 VEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
V H+F GD SH IY+ L TG++ E+
Sbjct: 656 VNGTPHVFVSGDRSHSHATDIYAKLEKLTGKMREMG 691
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 112/447 (25%), Positives = 185/447 (41%), Gaps = 81/447 (18%)
Query: 215 FWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGEN-GVRWNEHTFASALSACCGLR 273
F+ P+ D +N L+ G+ N + L+ + N + + T+A A++AC
Sbjct: 67 FFSVPK-PDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAAC---S 122
Query: 274 NVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIV 333
N K +H+ + +G SN FV S +VD+YCK + Y
Sbjct: 123 NDKHLMLLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVY--------------------- 161
Query: 334 GYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDAL 393
AR+ FD + E++ V+W + +G VK + L E V +GV D+
Sbjct: 162 ----------ARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVA-DGVRVDSS 210
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF 453
+ +L A A L G I L++G +++ L+ +YSKCG++ A ++F+
Sbjct: 211 TVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRI 270
Query: 454 IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAIL---SAFRHC---- 506
DL+ YN MI+ + +G E ++ LF E+L G + + T V ++ S F H
Sbjct: 271 NRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLAC 330
Query: 507 --------GSVEMGEKYFNSMTADYKI-------------SPETDHYA--CMIDLYGRAN 543
+ + + TA Y SPE A MI Y +
Sbjct: 331 SIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNG 390
Query: 544 QLEKAIEFMKSIPTEE---DAVILGSFLNVCRLNRNAELA----GEAEEKLLRLEGNNKA 596
E AI K + E +AV + + L+ C A+L G+ L++ E
Sbjct: 391 STETAISLFKEMMKTEFTPNAVTITTILSAC-----AQLGSLSFGKWVHHLIKSENLEPN 445
Query: 597 RYVQ--LANVYAAEGNWAEMGRIRKQM 621
YV L ++YA GN +E ++ M
Sbjct: 446 IYVSTALVDMYAKCGNISEAWQLFDSM 472
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 109/262 (41%), Gaps = 69/262 (26%)
Query: 10 LICHVQA--IKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACI 67
L C + +K+G+ L + IY+K N + +R LFDE PE+ V +WN +IS
Sbjct: 328 LACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMIS--- 384
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFT 127
GY G A+ LF EM + + T
Sbjct: 385 ----------------------------GYTQ-NGSTETAISLFKEMMKTE--FTPNAVT 413
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
+T+ L+ C +L ++ FG+ +H + + + + + ++L+DMY+KC EA ++F+ +
Sbjct: 414 ITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMS 473
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
E+ + V+WNT+I GY +G E LKL+
Sbjct: 474 EK---------------------------------NTVTWNTMIFGYGLHGYGHEALKLY 500
Query: 248 VRMGENGVRWNEHTFASALSAC 269
M G + TF S L AC
Sbjct: 501 NEMLHLGYNPSAVTFLSVLYAC 522
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 3/171 (1%)
Query: 342 EEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGA 401
AR F S+ + ++ ++ L G+ + + L + + D + A
Sbjct: 61 RHARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAA 120
Query: 402 CALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLY 461
C+ L +HA+ + G + + S LVD+Y K + YA +F ERD VL+
Sbjct: 121 CSNDKHL---MLLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLW 177
Query: 462 NVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMG 512
N MI + + +I LF EM+ G++ D+ T A+L A +++G
Sbjct: 178 NTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVG 228
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 186/655 (28%), Positives = 325/655 (49%), Gaps = 85/655 (12%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + +GL N L+ +Y++ + +++++F + R+ SWN +I A +S D
Sbjct: 130 HNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDW 189
Query: 73 KQARSLF-----DSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFT 127
A +F D P+ TY +++ G+ E + E
Sbjct: 190 SGALRIFKEMKCDVKPNS--TTYINVISGFSTPE--------VLPE-------------- 225
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
GR++HA +V D ++LI+MY KC EA VF+
Sbjct: 226 ----------------GRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFD--- 266
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
+ + D VSWN +I YV NGD E L+L+
Sbjct: 267 ------------------------------KMKKRDMVSWNVMIGCYVLNGDFHEALELY 296
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
++ G + + TF S L AC ++ + + +HS +L+ GL S V++ +V++Y KC
Sbjct: 297 QKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKC 356
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQG---NMEEARRHFDSLTEKNVVVWTALFS 364
++ A + R++ + S++I Y+ G + +AR+ FD L ++ + W A+ +
Sbjct: 357 GSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMIT 416
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
YV+ A + E G+ DA+ + +L ACA L K +HA I ++
Sbjct: 417 TYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELE 476
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
+ + +TL++MY++CG++ AE +F E+ +V + M+A ++ +G +A+ LF+EM
Sbjct: 477 SNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEM 536
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
+G+KPD VT+ +IL H GS+E G +YF M + ++P DH+A M+DL GR+ +
Sbjct: 537 DLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGR 596
Query: 545 LEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANV 604
L A E ++S+P E D V +FL CR++ EL A E++ L+ ++ A Y+ ++N+
Sbjct: 597 LFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNI 656
Query: 605 YAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
YAA G W ++ +RK+M RG+K + G S++ V+ ++H F+ G HP+T+ I
Sbjct: 657 YAAHGMWEKVASVRKKMEERGLK--KLPGLSFIEVDGKLHEFSSGGKYHPRTDEI 709
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 128/514 (24%), Positives = 217/514 (42%), Gaps = 69/514 (13%)
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
D T + L C +V GR LH + + + ++LI MY KC +A VF
Sbjct: 6 DNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVF 65
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
E WRQ + VSWN +I+ Y QNG + E
Sbjct: 66 ESMD----------------------------WRQ---RNVVSWNAMIAAYAQNGHSTEA 94
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
L L+ RM G+ + TF S L AC L +EIH+ V +GL S +++ +V +
Sbjct: 95 LVLYWRMNLQGLGTDHVTFVSVLGACSSLAQ---GREIHNRVFYSGLDSFQSLANALVTM 151
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y + ++ A+ M R+ S +++I+ +S G+ A R F +
Sbjct: 152 YARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCD--------- 202
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
VK N +++S F T E L G++IHA I+ G
Sbjct: 203 ---VKP-NSTTYINVISGFSTPE--------------------VLPEGRKIHAEIVANGF 238
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
D + + L++MY KCG+ A +F +RD+V +NVMI CY +G +A+ L+++
Sbjct: 239 DTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQK 298
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRAN 543
+ +G K TFV+IL A ++ G + +S + + E ++++Y +
Sbjct: 299 LDMEGFKRTKATFVSILGACSSVKALAQG-RLVHSHILERGLDSEVAVATALVNMYAKCG 357
Query: 544 QLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLAN 603
LE+A + ++ DAV + + N + A +A + RL + + +
Sbjct: 358 SLEEARKVFNAMKN-RDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMIT 416
Query: 604 VYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYV 637
Y G +I ++M G G + +++ V
Sbjct: 417 TYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAV 450
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 130/562 (23%), Positives = 229/562 (40%), Gaps = 123/562 (21%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L E H + + G + LI++Y K E+R++FD+M +R++ SWN +I
Sbjct: 223 LPEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGC 282
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
+ + D +A L+ ++ EG+ + +
Sbjct: 283 YVLNGDFHEALELYQK----------------LDMEGF------------------KRTK 308
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
T S L C + + GR +H+ +++ D+ ++L++MY+KC EEA +VF
Sbjct: 309 ATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNA 368
Query: 186 CTEEVNLISKNAMVAACCREG---EMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
+ ++ + ++ A G + A K F R D +SWN +I+ YVQNG A
Sbjct: 369 MKNR-DAVAWSTLIGAYASNGYGKDARKARKVFDRLGS-RDTISWNAMITTYVQNGCAVA 426
Query: 243 GLKLFVRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
+K+F M G G++ + TF + L AC L + K +H+ + ++ L SN V++ ++
Sbjct: 427 AMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLI 486
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
++Y +C G++EEA R F + EK VV WTA
Sbjct: 487 NMYARC-------------------------------GSLEEAERLFAAAKEKTVVSWTA 515
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG-------KEI 414
+ + + + DL E + EGV D + +L C +L G E+
Sbjct: 516 MVAAFSQYGRYAEALDLFQE-MDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAEL 574
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
HA + D + +VD+ + G + A+ + ++
Sbjct: 575 HA----LAPTADH--FAAMVDLLGRSGRLFDAKELLES---------------------- 606
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISP-ETDHYA 533
+ FE PD V ++ L+A R G +E+GE + Y++ P T Y
Sbjct: 607 ----MPFE--------PDPVAWMTFLTACRIHGKLELGEAAAERV---YELDPSSTAPYI 651
Query: 534 CMIDLYGRANQLEKAIEFMKSI 555
M ++Y EK K +
Sbjct: 652 AMSNIYAAHGMWEKVASVRKKM 673
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 173/616 (28%), Positives = 303/616 (49%), Gaps = 69/616 (11%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
N+F + I+ K + AR +FD P +D V +N+M+ G+ + Y D++++F++M
Sbjct: 147 NLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGF-SRNSYFEDSIRVFVDM 205
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
D + D T+ + L +L G + K + + ++ LI +YSKC
Sbjct: 206 --LDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKC- 262
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
C+ + + Q + D +S+N +ISGY
Sbjct: 263 -------------------------GKSCKG-------RILFDQIDQPDLISYNAMISGY 290
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
N + E + LF + +G R N T + +++ ++ I + LK G+I P
Sbjct: 291 TFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQP 350
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
VS+ + VYC+ + +A R+ FD EK
Sbjct: 351 SVSTALTTVYCRLNEVQFA-------------------------------RQLFDESPEK 379
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
++ W A+ SGY + + L E + + + + + + +L ACA AL GK +
Sbjct: 380 SLASWNAMISGYTQNGLTDRAISLFQEMMPQ--LSPNPVTVTSILSACAQLGALSIGKWV 437
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
H I ++ + + + LVDMY+KCG++ A +F +++++V +N MI Y HGH
Sbjct: 438 HGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHG 497
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC 534
++A+ LF EML+ GI P VTF++IL A H G V G + F+SM +Y P ++HYAC
Sbjct: 498 KEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYAC 557
Query: 535 MIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNN 594
M+D+ GRA QL A+EF++ +P E + G+ L C +++N E+A A ++L +L+ N
Sbjct: 558 MVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPEN 617
Query: 595 KARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKT 654
YV L+N+Y+ + N+ + +R+ ++ K + GC+ + ++ + ++FT GD SHP+
Sbjct: 618 VGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQA 677
Query: 655 NAIYSVLAIFTGELYE 670
AI+ +L TG++ E
Sbjct: 678 TAIFEMLEKLTGKMRE 693
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 176/604 (29%), Positives = 303/604 (50%), Gaps = 41/604 (6%)
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I + D +AR LFD+ P D T ++++ + G +A+K++ +Q + I
Sbjct: 104 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISA-LTTHGLSNEAIKIYSSLQ--ERGI 160
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+ D + C + +++H + + F ++LI Y KC+C E A R
Sbjct: 161 KPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARR 220
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
VF+ + D VSW +L S YV+ G
Sbjct: 221 VFDDLV---------------------------------VRDVVSWTSLSSCYVKCGFPR 247
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
+G+ +F MG +GV+ N T +S L AC L+++K KEIH + +++G++ N FV S +V
Sbjct: 248 KGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALV 307
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNV----V 357
+Y KC ++ A + L R+ S + ++ Y E+ F ++ V
Sbjct: 308 SLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEA 367
Query: 358 VWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
W A+ G ++ E ++ + + K G + + + +L AC+ L GKEIH Y
Sbjct: 368 TWNAVIGGCMENGRSEEAVEMFRK-MQKMGFKPNEITISSILPACSFSENLRMGKEIHCY 426
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
+ R D + L+ MY+KCG++ + +F +D+V +N MI A HG+ ++A
Sbjct: 427 VFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEA 486
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID 537
+ LF++ML ++P++VTF +LS H VE G + FNSM D+ + P+ +HY+C++D
Sbjct: 487 LFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVD 546
Query: 538 LYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKAR 597
+Y RA +L +A +F++ +P E A G+ L CR+ +N ELA + +KL +E NN
Sbjct: 547 IYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGN 606
Query: 598 YVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
YV L N+ W+E ++R M+ + GCSW+ V +++H F VGD S+ +++ I
Sbjct: 607 YVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIESDKI 666
Query: 658 YSVL 661
Y+ L
Sbjct: 667 YNFL 670
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 178/370 (48%), Gaps = 45/370 (12%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTI 62
+L +KE H A + G+ N LIH Y K + +R++FD++ R+V SW ++
Sbjct: 180 ALRVKEV---HDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSL 236
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
S +K G+ + +F EM + ++
Sbjct: 237 SSCYVKC--------------------------------GFPRKGMDVFREMGWSG--VK 262
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
+ TV+S L C +L ++ G+++H F V+ + F S+L+ +Y+KC EA V
Sbjct: 263 PNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMV 322
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFW---RQPELNDAVSWNTLISGYVQNGD 239
F+ +++S N ++ A + E E F R D +WN +I G ++NG
Sbjct: 323 FD-LMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGR 381
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
+EE +++F +M + G + NE T +S L AC N++ KEIH +V ++ + + ++
Sbjct: 382 SEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTA 441
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFD----SLTEKN 355
++ +Y KC ++N + ++ + ++ + ++MI+ ++ GN +EA FD S + N
Sbjct: 442 LLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPN 501
Query: 356 VVVWTALFSG 365
V +T + SG
Sbjct: 502 SVTFTGVLSG 511
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 150/316 (47%), Gaps = 45/316 (14%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+LK H A++ G+ + + L+ +Y+K +RE+R +FD MP R+V SWN +++
Sbjct: 280 DLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLT 339
Query: 65 ACIKSHDLKQARSLF----DSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
A K+ + ++ SLF D T+N+++ G + G +A+++F +MQ
Sbjct: 340 AYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCME-NGRSEEAVEMFRKMQKMG-- 396
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
+ +E T++S L C N+ G+++H ++ + + ++L+ MY+KC
Sbjct: 397 FKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKC------- 449
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
G++ ++ F D V+WNT+I +G+
Sbjct: 450 -------------------------GDLNLSRNVF-DMMRRKDVVAWNTMIIANAMHGNG 483
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI---SNPFVS 297
+E L LF +M + V+ N TF LS C R V+ +I + + ++ L+ +N +
Sbjct: 484 KEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHY-- 541
Query: 298 SGIVDVYCKCENMNYA 313
S +VD+Y + +N A
Sbjct: 542 SCVVDIYSRAGRLNEA 557
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 199/656 (30%), Positives = 325/656 (49%), Gaps = 106/656 (16%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
++ ++ H A K G+T N L+ +YSK L E
Sbjct: 315 VRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGE---------------------- 352
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
AR+LFD + K++V++N+++ GY + EG +L EMQ +E +R++E
Sbjct: 353 ---------ARALFDMNGGKNVVSWNTIIWGY-SKEGDFRGVFELLQEMQR-EEKVRVNE 401
Query: 126 FTVTSTLNLCV---KLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
TV + L C +LL++ +++H + + ++ + Y+KC + A RV
Sbjct: 402 VTVLNVLPACSGEHQLLSL---KEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERV 458
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
F C EG+ SWN LI + QNG +
Sbjct: 459 F------------------CGMEGKT---------------VSSWNALIGAHAQNGFPGK 485
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
L LF+ M ++G+ + T S L AC L+ ++C KEIH ++L+NGL + F+ ++
Sbjct: 486 SLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMS 545
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
+Y +C SSM++G + FD + K++V W +
Sbjct: 546 LYIQC---------------------SSMLLGKLI----------FDKMENKSLVCWNVM 574
Query: 363 FSGYVKAQ-NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+G+ + + CEAL D + ++ G+ + + +LGAC+ +AL GKE+H++ L+
Sbjct: 575 ITGFSQNELPCEAL-DTFRQMLSG-GIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKA 632
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
+ D + L+DMY+KCG M ++ IF E+D ++NV+IA Y HGH KAI LF
Sbjct: 633 HLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELF 692
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGR 541
E M KG +PD+ TF+ +L A H G V G KY M Y + P+ +HYAC++D+ GR
Sbjct: 693 ELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGR 752
Query: 542 ANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQL 601
A QL +A++ + +P E D+ I S L+ CR + E+ E +KLL LE N YV L
Sbjct: 753 AGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYVLL 812
Query: 602 ANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
+N+YA G W E+ ++R++M+ ++ AGCSW+ + ++ F V D S ++ I
Sbjct: 813 SNLYAGLGKWDEVRKVRQRMKENGLHKDAGCSWIEIGGMVYRFLVSDGSLSESKKI 868
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 136/551 (24%), Positives = 224/551 (40%), Gaps = 98/551 (17%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A+KAG N LI +Y K + + K+F+ M RN+ SWN+++ AC ++
Sbjct: 218 HALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGF 277
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+ +F +L I S +E + D T+ + +
Sbjct: 278 GECCGVFK----------------------------RLLI---SEEEGLVPDVATMVTVI 306
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C + V G +H K +SL+DMYSKC EA +F+
Sbjct: 307 PACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFD-------- 358
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG- 251
M + VSWNT+I GY + GD +L M
Sbjct: 359 -----MNGG--------------------KNVVSWNTIIWGYSKEGDFRGVFELLQEMQR 393
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
E VR NE T + L AC G + KEIH + ++G + + V++ V Y KC +++
Sbjct: 394 EEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLD 453
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
AE R F + K V W AL + +
Sbjct: 454 CAE-------------------------------RVFCGMEGKTVSSWNALIGAHAQNGF 482
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
DL + G+ D + LL ACA L GKEIH ++LR G+++D+ +
Sbjct: 483 PGKSLDLFL-VMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGI 541
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
+L+ +Y +C +M ++IF + LV +NVMI ++ + +A+ F +ML GIKP
Sbjct: 542 SLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKP 601
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
+ +L A ++ +G K +S +S + +ID+Y + +E++
Sbjct: 602 QEIAVTGVLGACSQVSALRLG-KEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNI 660
Query: 552 MKSIPTEEDAV 562
+ +++AV
Sbjct: 661 FDRVNEKDEAV 671
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 142/511 (27%), Positives = 226/511 (44%), Gaps = 78/511 (15%)
Query: 20 GLTLTTITTNQLIHIYSK-HNLLRESRKLFDEMPERNVFSWNTII--SACIKSHDLKQAR 76
G+ L ++ IH+ K H L+ S KL +++ V S I SAC D +R
Sbjct: 96 GILLRACGHHKNIHVGRKVHALVSASHKLRNDV----VLSTRIIAMYSACGSPSD---SR 148
Query: 77 SLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCV 136
+FD++ KDL YN++L GY + DA+ LF+E+ SA + + D FT+ C
Sbjct: 149 GVFDAAKEKDLFLYNALLSGYSRNALFR-DAISLFLELLSATD-LAPDNFTLPCVAKACA 206
Query: 137 KLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKN 196
+ +V G +HA +K + F ++LI MY KC E A +VFE NL+S N
Sbjct: 207 GVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFE-TMRNRNLVSWN 265
Query: 197 AMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVR 256
+++ AC G F R LIS EEGL V
Sbjct: 266 SVMYACSENGGFGECCGVFKR-----------LLIS-------EEEGLVPDVA------- 300
Query: 257 WNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESM 316
T + + AC + V+ +H K G+ V++ +VD+Y KC + A ++
Sbjct: 301 ----TMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARAL 356
Query: 317 LLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALF 376
+ G +N S +++I GYS +G+ F G +F
Sbjct: 357 FDMNGGKNVVSWNTIIWGYSKEGD----------------------FRG---------VF 385
Query: 377 DLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDM 436
+LL E +E V + + ++ +L AC+ + L KEIH Y R G D+ + + V
Sbjct: 386 ELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAA 445
Query: 437 YSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTF 496
Y+KC ++ AE +F + + +N +I +A +G K++ LF M++ G+ PD T
Sbjct: 446 YAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTI 505
Query: 497 VAILSA-----FRHCGSVEMGEKYFNSMTAD 522
++L A F CG G N + D
Sbjct: 506 GSLLLACARLKFLRCGKEIHGFMLRNGLELD 536
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 123/563 (21%), Positives = 226/563 (40%), Gaps = 144/563 (25%)
Query: 4 LNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
L+LKE H A + G + N + Y+K + L + ++F M + V SWN +I
Sbjct: 418 LSLKEI---HGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALI 474
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
A ++ G+ +L LF+ M D +
Sbjct: 475 GAHAQN--------------------------------GFPGKSLDLFLVMM--DSGMDP 500
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
D FT+ S L C +L + G+++H FM++ + F SL+ +Y +C
Sbjct: 501 DRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQC---------- 550
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
++M+ K + + E V WN +I+G+ QN E
Sbjct: 551 ------------SSMLLG-----------KLIFDKMENKSLVCWNVMITGFSQNELPCEA 587
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
L F +M G++ E L AC + ++ KE+HS+ LK L + FV+ ++D+
Sbjct: 588 LDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDM 647
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y KC G ME+++ FD + EK+ VW +
Sbjct: 648 YAKC-------------------------------GCMEQSQNIFDRVNEKDEAVWNVII 676
Query: 364 SGY-VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
+GY + +A+ L E + +G D+ + +L AC HA ++ G
Sbjct: 677 AGYGIHGHGLKAI--ELFELMQNKGGRPDSFTFLGVLIACN-----------HAGLVTEG 723
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
+ K + + ++Y ++ L Y ++ G +A+ L
Sbjct: 724 L----KYLGQMQNLYG---------------VKPKLEHYACVVDMLGRAGQLTEALKLVN 764
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISP-ETDHYACMIDLY-- 539
EM + +PD+ + ++LS+ R+ G +E+GE+ + ++ P + ++Y + +LY
Sbjct: 765 EMPD---EPDSGIWSSLLSSCRNYGDLEIGEEVSKKL---LELEPNKAENYVLLSNLYAG 818
Query: 540 -GRANQLEKAIEFMKSIPTEEDA 561
G+ +++ K + MK +DA
Sbjct: 819 LGKWDEVRKVRQRMKENGLHKDA 841
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 113/234 (48%), Gaps = 11/234 (4%)
Query: 322 VRNSFSISSMIVG-YSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLS 380
+RN +S+ I+ YS G+ ++R FD+ EK++ ++ AL SGY + L
Sbjct: 124 LRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFL 183
Query: 381 EFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC 440
E ++ + D L + ACA A + G+ +HA L+ G D + + L+ MY KC
Sbjct: 184 ELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKC 243
Query: 441 GNMTYAEIIFQNFIERDLVLYN-VMIACYAHHGHEE-----KAILLFEEMLEKGIKPDAV 494
G + A +F+ R+LV +N VM AC + G E K +L+ E E+G+ PD
Sbjct: 244 GFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISE---EEGLVPDVA 300
Query: 495 TFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
T V ++ A G V MG + + I+ E ++D+Y + L +A
Sbjct: 301 TMVTVIPACAAVGEVRMG-MVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEA 353
>gi|297794367|ref|XP_002865068.1| hypothetical protein ARALYDRAFT_920083 [Arabidopsis lyrata subsp.
lyrata]
gi|297310903|gb|EFH41327.1| hypothetical protein ARALYDRAFT_920083 [Arabidopsis lyrata subsp.
lyrata]
Length = 659
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 184/631 (29%), Positives = 308/631 (48%), Gaps = 80/631 (12%)
Query: 75 ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNL 134
AR LFD PH+D+V++ +++ GY+ A +AL LF + D + D ++ L
Sbjct: 39 ARHLFDQMPHRDIVSWTAIINGYVTAAN-SFEALNLFSALL-FDPAVSPDTSVLSVALKA 96
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
C + N+G+G LHA+ KTS S F ++L++MY + ++ CR+F
Sbjct: 97 CGQSSNIGYGESLHAYAFKTSLLTSVFVGTNLLNMYMRTGKIDKGCRIF----------- 145
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
EM + + V+W ++SG V+ G +EGL F M +
Sbjct: 146 -------------TEM---------QFRNTVTWTAIVSGMVEAGRHKEGLTYFSEMSRSK 183
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
++ FA+AL AC LR VK KEIH+ V+ G ++ V + ++++Y +C M+
Sbjct: 184 GLSDDFAFATALKACARLRQVKYGKEIHTHVIVRGSDASLCVVNSLINMYTECGEMHDGV 243
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEA----------RRH----------------- 347
+ R+ FS +++I YS G E+A RR
Sbjct: 244 HLFESMSERDVFSWTTLIDAYSQMGQEEKAVATFLKIEIFRRTSQWTYFCLGDSLSVSNS 303
Query: 348 -----------------FDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVT 390
F + ++++ W+ + GY +A E +F S ++ + G
Sbjct: 304 MMKMYSTCGKLDSASVLFQGMRRRDIITWSTIIGGYSQAGLGEEVFMCFS-WMRQAGPKP 362
Query: 391 DALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIF 450
L LL A L G+++HA L +G++ + + S L++MYSKCG++ A IF
Sbjct: 363 TDPALASLLSVSGTMAVLEQGRQVHALALYLGLEQNSTIRSALINMYSKCGSIEEASKIF 422
Query: 451 QNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVE 510
+ D+V MI YA HG+ ++AI LFE+ L+ G++PD VTF+++L+A H G ++
Sbjct: 423 EETDTDDIVSLTAMINGYAEHGNTKEAIDLFEKSLKVGLRPDTVTFISVLTACSHSGQLD 482
Query: 511 MGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNV 570
+G +YFN M +Y I P +HY CM+DL RA +L A + + +P ++D V+ + LN
Sbjct: 483 LGFRYFNLMQDEYNIRPVKEHYGCMVDLLCRAGRLSDAEKMINEMPWKKDDVVWTTLLNA 542
Query: 571 CRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFA 630
C+ + E A E++L L+ ++ +V LAN+Y++ G E +RK M+ +
Sbjct: 543 CKAKGDTERGRRAAERILELDPTSETAFVTLANIYSSTGKLEEAAHVRKAMKSKGVIKVP 602
Query: 631 GCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
G S + + F G SH ++ IYS+L
Sbjct: 603 GWSSIKIMDRASTFVSGSQSHSQSEDIYSIL 633
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 120/544 (22%), Positives = 221/544 (40%), Gaps = 115/544 (21%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A K L + L+++Y + + + ++F EM RN +W I+S +
Sbjct: 110 HAYAFKTSLLTSVFVGTNLLNMYMRTGKIDKGCRIFTEMQFRNTVTWTAIVSGMV----- 164
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
++ HK+ +TY F EM + D+F + L
Sbjct: 165 -------EAGRHKEGLTY--------------------FSEMSRSKG--LSDDFAFATAL 195
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C +L V +G+++H ++ +DAS V+SLI+MY++C + +FE +E ++
Sbjct: 196 KACARLRQVKYGKEIHTHVIVRGSDASLCVVNSLINMYTECGEMHDGVHLFESMSER-DV 254
Query: 193 ISKNAMVAACCREGEMEMALKTF-----------WRQPELNDAVS--------------- 226
S ++ A + G+ E A+ TF W L D++S
Sbjct: 255 FSWTTLIDAYSQMGQEEKAVATFLKIEIFRRTSQWTYFCLGDSLSVSNSMMKMYSTCGKL 314
Query: 227 -----------------WNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
W+T+I GY Q G EE F M + G + + AS LS
Sbjct: 315 DSASVLFQGMRRRDIITWSTIIGGYSQAGLGEEVFMCFSWMRQAGPKPTDPALASLLSVS 374
Query: 270 CGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSIS 329
+ ++ +++H+ L GL N + S ++++Y KC
Sbjct: 375 GTMAVLEQGRQVHALALYLGLEQNSTIRSALINMYSKC---------------------- 412
Query: 330 SMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVV 389
G++EEA + F+ ++V TA+ +GY + N + DL E K G+
Sbjct: 413 ---------GSIEEASKIFEETDTDDIVSLTAMINGYAEHGNTKEAIDLF-EKSLKVGLR 462
Query: 390 TDALILVILLGACALQAALHPG-KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAE- 447
D + + +L AC+ L G + + ++ K+ +VD+ + G ++ AE
Sbjct: 463 PDTVTFISVLTACSHSGQLDLGFRYFNLMQDEYNIRPVKEHYGCMVDLLCRAGRLSDAEK 522
Query: 448 IIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVT-FVAILSAFRHC 506
+I + ++D V++ ++ G E+ E +LE + P + T FV + + +
Sbjct: 523 MINEMPWKKDDVVWTTLLNACKAKGDTERGRRAAERILE--LDPTSETAFVTLANIYSST 580
Query: 507 GSVE 510
G +E
Sbjct: 581 GKLE 584
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 125/272 (45%), Gaps = 33/272 (12%)
Query: 211 ALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF-VRMGENGVRWNEHTFASALSAC 269
A + + Q D VSW +I+GYV ++ E L LF + + V + + AL AC
Sbjct: 38 AARHLFDQMPHRDIVSWTAIINGYVTAANSFEALNLFSALLFDPAVSPDTSVLSVALKAC 97
Query: 270 CGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSIS 329
N+ + +H++ K L+++ FV + ++++Y +
Sbjct: 98 GQSSNIGYGESLHAYAFKTSLLTSVFVGTNLLNMYMRT---------------------- 135
Query: 330 SMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVV 389
G +++ R F + +N V WTA+ SG V+A + SE +G +
Sbjct: 136 ---------GKIDKGCRIFTEMQFRNTVTWTAIVSGMVEAGRHKEGLTYFSEMSRSKG-L 185
Query: 390 TDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEII 449
+D L ACA + GKEIH +++ G ++++L++MY++CG M +
Sbjct: 186 SDDFAFATALKACARLRQVKYGKEIHTHVIVRGSDASLCVVNSLINMYTECGEMHDGVHL 245
Query: 450 FQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
F++ ERD+ + +I Y+ G EEKA+ F
Sbjct: 246 FESMSERDVFSWTTLIDAYSQMGQEEKAVATF 277
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 96/250 (38%), Gaps = 41/250 (16%)
Query: 340 NMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILL 399
N AR FD + +++V WTA+ +GYV A N +L S + V D +L + L
Sbjct: 35 NQGAARHLFDQMPHRDIVSWTAIINGYVTAANSFEALNLFSALLFDPAVSPDTSVLSVAL 94
Query: 400 GACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLV 459
AC + + G+ +HAY + + + + L++MY + G + IF R+ V
Sbjct: 95 KACGQSSNIGYGESLHAYAFKTSLLTSVFVGTNLLNMYMRTGKIDKGCRIFTEMQFRNTV 154
Query: 460 LYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA----------------- 502
+ +++ G ++ + F EM D F L A
Sbjct: 155 TWTAIVSGMVEAGRHKEGLTYFSEMSRSKGLSDDFAFATALKACARLRQVKYGKEIHTHV 214
Query: 503 ------------------FRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
+ CG + G F SM+ S + +ID Y + Q
Sbjct: 215 IVRGSDASLCVVNSLINMYTECGEMHDGVHLFESMSERDVFS-----WTTLIDAYSQMGQ 269
Query: 545 LEKAI-EFMK 553
EKA+ F+K
Sbjct: 270 EEKAVATFLK 279
>gi|357475531|ref|XP_003608051.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509106|gb|AES90248.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 763
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 199/686 (29%), Positives = 345/686 (50%), Gaps = 78/686 (11%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
+V S N I+ K+ L +AR +FD P + + ++N+M+ GY + G +AL L M
Sbjct: 36 HVISTNISIAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGY-SQWGKYTEALTLVSFM 94
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
S+ ++ +E + ++ L+ C + ++ G+Q+H+ + K+ G S+L+ Y +C
Sbjct: 95 HSS--CVKFNEVSFSACLSACTRGGSLFLGKQIHSLLFKSGYQRFGPVGSALLHYYVQCC 152
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
EA VFE +E N + + M+A + + A++ F + P + D V+W TLISGY
Sbjct: 153 GIREAEMVFEELRDE-NHVLWSLMLAGYVQRDMIGDAMEIFEKMP-VRDVVAWTTLISGY 210
Query: 235 VQNGDA-EEGLKLFVRMGENG-VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
+ D E L LF M + V NE T L C LR + K +H +K+G
Sbjct: 211 AKREDGCERALDLFGCMRRSSEVLPNEFTLDCVLRVCARLRILYVGKVVHGLCIKDGFDF 270
Query: 293 NPFVSSGIVDVYC------------------KCENM------------NYAESMLLLKGV 322
+ VSS + + YC C N+ E+ ++ G+
Sbjct: 271 DNSVSSALAEFYCVSDAVDDAKRVYESMVGEACSNVADSLIGGLVSMGRVKEAGMIFYGL 330
Query: 323 RNSFSISS--MIVGYSLQGNMEEARRHFDSLT---------------------------- 352
R+ IS+ MI GY++ G +++++ F+ ++
Sbjct: 331 RDKTLISNNLMIKGYAMSGQFKKSKKLFEKMSLKHLTSLNTMITVYSKNGELDEAVKLFD 390
Query: 353 ----EKNVVVWTALFSGYV-KAQNCEA--LFDLLSEFVTKEGVVTDALILVILLGACALQ 405
E+N V W ++ SGY+ ++ EA L+ + F+ + T +L ACA
Sbjct: 391 KTKGERNCVTWNSMMSGYIHNGEHSEALKLYVTMRRFLVEYSRST----FSVLFRACAYL 446
Query: 406 AALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMI 465
+ G+ +HA++ + Q + + + LVD YSKCG++ A+ F + ++ + +I
Sbjct: 447 CSFQQGQLLHAHLAKTPYQENVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALI 506
Query: 466 ACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKI 525
YA+HG +AI F ML++G+ P+A TFVA+LSA H G V+ G K+F+SM +Y+I
Sbjct: 507 NGYAYHGCGSEAISRFRSMLDQGVVPNAATFVAVLSACSHAGLVDEGLKFFHSMQINYRI 566
Query: 526 SPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEE 585
+P +HY C++DL GR+ ++++A EF+ +P + D VI G+ LN N EL A
Sbjct: 567 TPTIEHYTCVVDLLGRSGRVKEAEEFIIQMPIKADGVIWGALLNASCFWNNVELGERAAV 626
Query: 586 KLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFT 645
KL L+ N+ + V L+N+YA G W + +IRK+++ ++ + G SW+ + + +H+F+
Sbjct: 627 KLFSLDPNSVSALVTLSNMYARRGRWGKKTKIRKRLQSLELRKDQGFSWIELNNNVHLFS 686
Query: 646 VGDVSHPKTNAIYSVLAIFTGELYEI 671
V D +HP ++ IY + T + I
Sbjct: 687 VEDTTHPYSDVIYKTVEHITATINSI 712
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 129/559 (23%), Positives = 235/559 (42%), Gaps = 111/559 (19%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H K+G + L+H Y + +RE+ +F+E+ + N W+ +++ ++ +
Sbjct: 126 HSLLFKSGYQRFGPVGSALLHYYVQCCGIREAEMVFEELRDENHVLWSLMLAGYVQRDMI 185
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
A +F+ P +D+V + +++ GY E AL LF M+ + E + +EFT+ L
Sbjct: 186 GDAMEIFEKMPVRDVVAWTTLISGYAKREDGCERALDLFGCMRRSSE-VLPNEFTLDCVL 244
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV-- 190
+C +L + G+ +H +K D S+L + Y ++A RV+E E
Sbjct: 245 RVCARLRILYVGKVVHGLCIKDGFDFDNSVSSALAEFYCVSDAVDDAKRVYESMVGEACS 304
Query: 191 -----------------------------NLISKNAMVAACC------------------ 203
LIS N M+
Sbjct: 305 NVADSLIGGLVSMGRVKEAGMIFYGLRDKTLISNNLMIKGYAMSGQFKKSKKLFEKMSLK 364
Query: 204 -------------REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
+ GE++ A+K F + + V+WN+++SGY+ NG+ E LKL+V M
Sbjct: 365 HLTSLNTMITVYSKNGELDEAVKLFDKTKGERNCVTWNSMMSGYIHNGEHSEALKLYVTM 424
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
V ++ TF+ AC L + + + +H+ + K N +V + +VD Y KC
Sbjct: 425 RRFLVEYSRSTFSVLFRACAYLCSFQQGQLLHAHLAKTPYQENVYVGTALVDFYSKC--- 481
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
G++ +A+R F S+ NV WTAL +GY
Sbjct: 482 ----------------------------GHLADAQRSFTSIFSPNVAAWTALINGYA-YH 512
Query: 371 NCEALFDLLSEF--VTKEGVVTDALILVILLGACALQAALHPG-KEIHAYILRMGVQMDK 427
C + + +S F + +GVV +A V +L AC+ + G K H+ + +
Sbjct: 513 GCGS--EAISRFRSMLDQGVVPNAATFVAVLSACSHAGLVDEGLKFFHSMQINYRITPTI 570
Query: 428 KLISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMI--ACYAHHGH--EEKAILLFE 482
+ + +VD+ + G + A E I Q I+ D V++ ++ +C+ ++ E A+ LF
Sbjct: 571 EHYTCVVDLLGRSGRVKEAEEFIIQMPIKADGVIWGALLNASCFWNNVELGERAAVKLFS 630
Query: 483 EMLEKGIKPDAVTFVAILS 501
+ P++V+ + LS
Sbjct: 631 ------LDPNSVSALVTLS 643
>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 207/642 (32%), Positives = 319/642 (49%), Gaps = 74/642 (11%)
Query: 26 ITTNQLIHIY-SKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPH 84
+ N LI +Y S + ++R +FD + RN SWN+IIS + D A LF S
Sbjct: 238 VVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQK 297
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
+ L G+ F E +E R G
Sbjct: 298 EGL--------------GFSFKPNDAFSEFSVLEEGRRK--------------------G 323
Query: 145 RQLHAFMVKTSNDASGFAVSS-LIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
R++HA +++T + + A+ + L++MY+K +AC VFE E+ + +S N++++
Sbjct: 324 REVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEK-DSVSWNSLISGLD 382
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE--EGLKLFVRMGENGVRWNEHT 261
+ E A + F PE D VSWN++I G + + +A + +K F++M G + T
Sbjct: 383 QNECSEDAAEMFSLMPEY-DQVSWNSVI-GALSDSEASVSQAVKYFLQMMRGGWGLSRVT 440
Query: 262 FASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKG 321
F + LSA L + + +IH+ VLK L + + + ++ Y KC MN E +
Sbjct: 441 FINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIF---- 496
Query: 322 VRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSE 381
M E R + V W ++ SGY+ + DL+
Sbjct: 497 -----------------ARMSETR---------DEVSWNSMISGYIHNELLHKAMDLV-W 529
Query: 382 FVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
F+ ++G D+ +L ACA A L G E+HA +R ++ D + S LVDMYSKCG
Sbjct: 530 FMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCG 589
Query: 442 NMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
+ YA F+ R++ +N MI+ YA HGH EKA+ LF M+ G PD VTFV +LS
Sbjct: 590 RIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLS 649
Query: 502 AFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDA 561
A H G VE G ++F SM+ Y++SP +H++CM+DL GRA +L++ +F+ S+P + +
Sbjct: 650 ACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNV 709
Query: 562 VILGSFLNV-CRLN-RNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRK 619
+I + L CR N RN EL A E LL LE N YV LAN+YA+ W ++ + R
Sbjct: 710 LIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKART 769
Query: 620 QMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
M+ + AGCSWV ++ +H+F GD HP+ + IY L
Sbjct: 770 AMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKL 811
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 138/559 (24%), Positives = 237/559 (42%), Gaps = 81/559 (14%)
Query: 7 KEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISAC 66
+EA H+Q+IK G +N LI+IY + L ++KLFDEM RN+ +W +IS
Sbjct: 116 EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGY 175
Query: 67 IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEF 126
++ +A + F +D+V G+I + +
Sbjct: 176 TQNGKPDEACARF-----RDMVR-----AGFIP------------------------NHY 201
Query: 127 TVTSTLNLCVKLLNVG--FGRQLHAFMVKTSNDASGFAVSSLIDMYSKC-RCYEEACRVF 183
S L C + G G Q+H + KT + + LI MY C +A VF
Sbjct: 202 AFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVF 261
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
+G + +++SWN++IS Y + GDA
Sbjct: 262 DGIG---------------------------------IRNSISWNSIISVYSRRGDAVSA 288
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF-VSSGIVD 302
LF M + G+ ++ + + +E+H+ V++ GL N + +G+V+
Sbjct: 289 YDLFSSMQKEGLGFSFKPNDAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVN 348
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
+Y K + A S+ L ++S S +S+I G E+A F + E + V W ++
Sbjct: 349 MYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSV 408
Query: 363 FSGY--VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
+A +A+ L + + G + + +L A + + +IHA +L+
Sbjct: 409 IGALSDSEASVSQAVKYFLQ--MMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLK 466
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIE-RDLVLYNVMIACYAHHGHEEKAIL 479
+ D + + L+ Y KCG M E IF E RD V +N MI+ Y H+ KA+
Sbjct: 467 YCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMD 526
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY--ACMID 537
L M++KG + D+ TF ILSA C SV E+ + E+D + ++D
Sbjct: 527 LVWFMMQKGQRLDSFTFATILSA---CASVATLERGMEVHACGIRACLESDVVVGSALVD 583
Query: 538 LYGRANQLEKAIEFMKSIP 556
+Y + +++ A F + +P
Sbjct: 584 MYSKCGRIDYASRFFELMP 602
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 158/337 (46%), Gaps = 35/337 (10%)
Query: 13 HVQAIKAGLTLTTITT-NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHD 71
H I+ GL + N L+++Y+K + ++ +F+ M E++ SWN++IS ++
Sbjct: 327 HAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNEC 386
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
+ A +F P D V++NS++ ++E + A+K F++M + T +
Sbjct: 387 SEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGG--WGLSRVTFINI 444
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L+ L Q+HA ++K ++L+ Y KC
Sbjct: 445 LSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKC------------------ 486
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
GEM K F R E D VSWN++ISGY+ N + + L M
Sbjct: 487 --------------GEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMM 532
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
+ G R + TFA+ LSAC + ++ E+H+ ++ L S+ V S +VD+Y KC ++
Sbjct: 533 QKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRID 592
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHF 348
YA L +RN +S +SMI GY+ G+ E+A + F
Sbjct: 593 YASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLF 629
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 161/368 (43%), Gaps = 55/368 (14%)
Query: 165 SLIDMYSKCRCYEEACRV--------FEGCTEEVNLISKNAMVAACCREGEMEMALKTFW 216
SLI+ Y C EEA + F G NL N ++ R G++ A K F
Sbjct: 104 SLINRYQGSCCSEEARELHLQSIKYGFVG-----NLFLSNTLINIYVRIGDLGSAQKLFD 158
Query: 217 RQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC--CGLRN 274
N V+W LISGY QNG +E F M G N + F SAL AC G
Sbjct: 159 EMSNRN-LVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSG 217
Query: 275 VKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC-ENMNYAESMLLLKGVRNSFSISSMIV 333
K +IH + K S+ V + ++ +Y C ++ N A S+ G+RNS S +S+I
Sbjct: 218 CKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIIS 277
Query: 334 GYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDAL 393
YS +G+ A F S+ ++ + G+ N D SEF
Sbjct: 278 VYSRRGDAVSAYDLFSSMQKEGL--------GFSFKPN-----DAFSEF----------- 313
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST-LVDMYSKCGNMTYAEIIFQN 452
L+ G+E+HA+++R G+ +K I LV+MY+K G + A +F+
Sbjct: 314 --------SVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFEL 365
Query: 453 FIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHC-GSVEM 511
+E+D V +N +I+ + E A +F M E D V++ +++ A SV
Sbjct: 366 MVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEY----DQVSWNSVIGALSDSEASVSQ 421
Query: 512 GEKYFNSM 519
KYF M
Sbjct: 422 AVKYFLQM 429
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 129/311 (41%), Gaps = 42/311 (13%)
Query: 278 AKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSL 337
A+E+H +K G + N F+S+ ++++Y + ++ A+ + RN + + +I GY+
Sbjct: 118 ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQ 177
Query: 338 QGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVI 397
G +EA F + + F ++A C+ + G
Sbjct: 178 NGKPDEACARFRDMVRAGFIPNHYAFGSALRA--CQ-----------ESGP--------- 215
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC-GNMTYAEIIFQNFIER 456
C L G +IH I + D + + L+ MY C + A +F R
Sbjct: 216 --SGCKL------GVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIR 267
Query: 457 DLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI----KP-DAVTFVAILSAFRHCGSVEM 511
+ + +N +I+ Y+ G A LF M ++G+ KP DA + ++L R G E+
Sbjct: 268 NSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVLEEGRRKGR-EV 326
Query: 512 GEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVC 571
+ D K++ ++++Y ++ + A + + E+D+V S ++
Sbjct: 327 HAHVIRTGLNDNKVAIGNG----LVNMYAKSGAIADACSVFE-LMVEKDSVSWNSLISGL 381
Query: 572 RLNRNAELAGE 582
N +E A E
Sbjct: 382 DQNECSEDAAE 392
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L+ + H I+A L + + L+ +YSK + + + F+ MP RNV+SWN++IS
Sbjct: 556 LERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISG 615
Query: 66 CIKSHDLKQARSLF-----DSSPHKDLVTYNSML--CGYIN--AEGYE 104
+ ++A LF D P D VT+ +L C ++ EG+E
Sbjct: 616 YARHGHGEKALKLFTRMMLDGQP-PDHVTFVGVLSACSHVGFVEEGFE 662
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 177/600 (29%), Positives = 312/600 (52%), Gaps = 37/600 (6%)
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+IS+C S L A S+F+ P + N L +E E L ++ M++ + +
Sbjct: 62 VISSCALSSSLDYALSVFNLIPKPETHLCNRFLRELSRSEEPE-KTLLVYERMRT--QGL 118
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+D F+ L ++ ++ G ++H K D+ F + L+ MY+ C EA
Sbjct: 119 AVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARL 178
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F+ K F R D V+W+ +I GY Q+G
Sbjct: 179 MFD----------------------------KMFHR-----DVVTWSIMIDGYCQSGLFN 205
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
+ L LF M V +E ++ LSAC N+ K IH ++++N ++ +P + S +V
Sbjct: 206 DALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALV 265
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
+Y C +M+ A ++ +N + ++M+ GYS G +E AR F+ + +K++V W+A
Sbjct: 266 TMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSA 325
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+ SGY ++ + + +L +E + G+ D + ++ ++ ACA AL K IH ++ +
Sbjct: 326 MISGYAESDSPQEALNLFNE-MQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKN 384
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
G + + L++MY+KCG++ A IF ++++ + MI+ +A HG A+ F
Sbjct: 385 GFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFF 444
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGR 541
+M ++ I+P+ +TFV +L A H G VE G K F SM ++ I+P+ HY CM+DL+GR
Sbjct: 445 HQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGR 504
Query: 542 ANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQL 601
AN L +A+E ++++P + +I GS + CR++ EL A ++LL L+ ++ +V L
Sbjct: 505 ANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFL 564
Query: 602 ANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+N+YA W ++G++RK M+ ++ GCS + +EIH F V D SH + IY L
Sbjct: 565 SNIYAKARRWEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFLVADRSHKHADEIYEKL 624
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 127/555 (22%), Positives = 236/555 (42%), Gaps = 109/555 (19%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R +L E L H A K G L+ +Y+ + E+R +FD+M R+V +W+
Sbjct: 134 RVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSI 193
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I GY + G DAL LF EM++ + +
Sbjct: 194 MID-------------------------------GYCQS-GLFNDALLLFEEMKNYN--V 219
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
DE +++ L+ C + N+ +G+ +H F+++ + S+L+ MY+ C + A
Sbjct: 220 EPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALN 279
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+FE T + NL++ AMV + G++E A ++ + Q D V W+ +ISGY ++ +
Sbjct: 280 LFEKMTPK-NLVASTAMVTGYSKLGQIENA-RSVFNQMVKKDLVCWSAMISGYAESDSPQ 337
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E L LF M G++ ++ T S ++AC L + AK IH +V KNG +++ ++
Sbjct: 338 EALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALI 397
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
++Y KC G++E ARR FD + KNV+ WT
Sbjct: 398 EMYAKC-------------------------------GSLERARRIFDKMPRKNVISWTC 426
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+ S + + + + + E + + + V +L AC+ + G++I
Sbjct: 427 MISAFAMHGDAGSALRFFHQ-MEDENIEPNGITFVGVLYACSHAGLVEEGRKI------- 478
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
+ +I ++ I V Y M+ + +A+ L
Sbjct: 479 -----------------------FYSMINEHNITPKHVHYGCMVDLFGRANLLREALELV 515
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH---YACMIDL 538
E M + P+ + + ++++A R G +E+GE A + + DH + + ++
Sbjct: 516 EAM---PLAPNVIIWGSLMAACRVHGEIELGE-----FAAKRLLELDPDHDGAHVFLSNI 567
Query: 539 YGRANQLEKAIEFMK 553
Y +A + E + K
Sbjct: 568 YAKARRWEDVGQVRK 582
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 186/632 (29%), Positives = 320/632 (50%), Gaps = 16/632 (2%)
Query: 52 PERNVFSWNTIISACIKSHDLKQARSLFDSSP--HKDLVTYNSMLCGYINAEGYEADALK 109
P R ++++A + L+ A + FD+ P +D V +N+M+ + A A A+
Sbjct: 88 PTRAPSPATSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARAS-LAAPAVS 146
Query: 110 LFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR--QLHAFMVKTSNDASGFAVSSLI 167
+F + + +R D+++ T+ ++ ++ N+ QLH ++K+ A ++LI
Sbjct: 147 VFHALLGSGS-LRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALI 205
Query: 168 DMYSKCRCYE---EACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDA 224
+Y KC E +A +V + ++ +L + MV R G++ A F D
Sbjct: 206 ALYMKCDTPEASWDARKVLDEMPDKDDL-TWTTMVVGYVRRGDVNAARSVFEEVDGKFDV 264
Query: 225 VSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSW 284
V WN +ISGYVQ+G + +LF RM V +E TF S LSAC K +H
Sbjct: 265 V-WNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQ 323
Query: 285 VLKNGLISNP----FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGN 340
+++ P V++ +V +Y K + A+ + +++ S ++++ GY G
Sbjct: 324 IIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGC 383
Query: 341 MEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLG 400
+++A F + KN + W + SGYV E L ++ + E V +
Sbjct: 384 LDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQ-MRAEDVKPCDYTYAGAIA 442
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL 460
AC AL G+++HA++++ G + + L+ MY+KCG + A ++F D V
Sbjct: 443 ACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVS 502
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
+N MI+ HGH +A+ LF++M+ +GI PD ++F+ IL+A H G V+ G YF SM
Sbjct: 503 WNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMK 562
Query: 521 ADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELA 580
D+ ISP DHYA +IDL GR+ ++ +A + +K++P E I + L+ CR N + E
Sbjct: 563 RDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFG 622
Query: 581 GEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHE 640
A ++L R+ + Y+ L+N Y+A G W + R+RK MR + GCSW+ V +
Sbjct: 623 AYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSK 682
Query: 641 IHIFTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
IH+F VGD HP+ +Y L + + ++
Sbjct: 683 IHVFLVGDTKHPEAQEVYQFLEVIGARMRKLG 714
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 193/366 (52%), Gaps = 18/366 (4%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRES---RKLFDEMPERNVF 57
M +L H +K+G +N LI +Y K + S RK+ DEMP+++
Sbjct: 174 MHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDL 233
Query: 58 SWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSA 117
+W T++ ++ D+ ARS+F+ K V +N+M+ GY+ + G ADA +LF M S
Sbjct: 234 TWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQS-GMCADAFELFRRMVS- 291
Query: 118 DEHIRMDEFTVTSTLNLCVKLLNVGF---GRQLHAFMVKTS----NDASGFAVSSLIDMY 170
E + +DEFT TS L+ C N GF G+ +H +++ +A+ ++L+ +Y
Sbjct: 292 -EKVPLDEFTFTSVLSACA---NAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLY 347
Query: 171 SKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTL 230
SK A R+F+ + +++S N +++ G ++ A++ F P ND +SW +
Sbjct: 348 SKGGKIVIAKRIFDTMNLK-DVVSWNTILSGYIDSGCLDKAVEVFKVMPYKND-LSWMVM 405
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL 290
+SGYV G +E+ LKLF +M V+ ++T+A A++AC L +K +++H+ +++ G
Sbjct: 406 VSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGF 465
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
++ + ++ +Y KC +N A + L+ +S S ++MI G+ EA FD
Sbjct: 466 EASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQ 525
Query: 351 LTEKNV 356
+ + +
Sbjct: 526 MVAEGI 531
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 130/239 (54%), Gaps = 8/239 (3%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLV 88
N L+ +YSK + ++++FD M ++V SWNTI+S I S L +A +F P+K+ +
Sbjct: 341 NALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDL 400
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLH 148
++ M+ GY++ G DALKLF +M++ D ++ ++T + C +L + GRQLH
Sbjct: 401 SWMVMVSGYVHG-GLSEDALKLFNQMRAED--VKPCDYTYAGAIAACGELGALKHGRQLH 457
Query: 149 AFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEM 208
A +V+ +AS A ++L+ MY+KC +A VF ++ +S NAM++A + G
Sbjct: 458 AHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFL-VMPNLDSVSWNAMISALGQHGHG 516
Query: 209 EMALKTFWRQPELN---DAVSWNTLISGYVQNGDAEEGLKLFVRMGEN-GVRWNEHTFA 263
AL+ F + D +S+ T+++ G +EG F M + G+ E +A
Sbjct: 517 REALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYA 575
>gi|449518887|ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35030, mitochondrial-like [Cucumis sativus]
Length = 649
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 202/640 (31%), Positives = 314/640 (49%), Gaps = 63/640 (9%)
Query: 44 SRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGY 103
S + D NV N +I+ K + +AR +F+ P +D+V++ +++ GYI G
Sbjct: 54 SSPVRDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKC-GM 112
Query: 104 EADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV 163
+A LF NDA V
Sbjct: 113 IEEAKTLF------------------------------------------DRNDAIKNVV 130
Query: 164 S--SLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPEL 221
+ +L+ Y + EEA R+F+ + N+IS N M+ R+G ++ AL F PE
Sbjct: 131 TWTALVSGYVRWNRIEEARRLFDAMPVK-NVISWNTMIEGYARKGWIDQALDLFEXMPER 189
Query: 222 NDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGV-RWNEHTFASALSACCGLRNVKCAKE 280
N VSWNT+I+ ++Q +E +LF RM E V W T + LS + + +
Sbjct: 190 N-VVSWNTVITAFMQRRRVDEAQELFNRMPERDVISWT--TMVAGLSKNGRIDDAR---- 242
Query: 281 IHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGV--RNSFSISSMIVGYSLQ 338
+L + + VS + + +NM E+ L + + R S ++MI G+
Sbjct: 243 ----LLFDKMPVRNVVSWNTM-IIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQN 297
Query: 339 GNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVIL 398
G +E A F ++ KNVV WTA+ SG+V+ E + SE V + V +
Sbjct: 298 GKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSV 357
Query: 399 LGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQN--FIER 456
LGAC+ AAL G++IH I + Q ++S L++MYSKCG + A IF + R
Sbjct: 358 LGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELARKIFDDGSIGHR 417
Query: 457 DLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYF 516
D+V +N MIA YAHHGH KAI LF+EM G +PD VT++A+LSA H G V+ G K F
Sbjct: 418 DVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACSHAGLVDEGLKLF 477
Query: 517 NSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRN 576
++ D I DH+ C++DL+GRA +L++A +F+K + + A + + L C ++ +
Sbjct: 478 ENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEVKPSASVWAALLAGCNVHGH 537
Query: 577 AELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVY 636
+L EKLL E N Y+ L+N+YA+ G W E +R +M+ + GCSW+
Sbjct: 538 IDLGKLTAEKLLETEPENAGTYLVLSNIYASTGKWREAAGVRMKMKDKGLKKQPGCSWIE 597
Query: 637 VEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIAGAFY 676
V + +H+F VGD SH + IY +L ++ +I Y
Sbjct: 598 VGNTVHVFVVGDNSHREFENIYLLLHDLHTKMKKIGHTLY 637
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/466 (25%), Positives = 212/466 (45%), Gaps = 50/466 (10%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
+T L+ Y + N + E+R+LFD MP +NV SWNT+I + + QA LF+ P +
Sbjct: 130 VTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEXMPER 189
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR 145
++V++N+++ ++ + +A +LF RM E V S + L G
Sbjct: 190 NVVSWNTVITAFMQRRRVD-EAQELF---------NRMPERDVISWTTMVAGLSKNGRID 239
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
K + + +++I Y++ +EA ++FE E L S N M+ +
Sbjct: 240 DARLLFDKMPV-RNVVSWNTMIIGYAQNMRLDEAFKLFEQMPER-ELSSWNTMITGFIQN 297
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM-GENGVRWNEHTFAS 264
G++E A+ F++ N V+W +ISG+VQ+G +EE LK+F M N V+ NE TF S
Sbjct: 298 GKLERAVDFFYKMSNKN-VVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVS 356
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
L AC L + ++IH + K V S ++++Y KC
Sbjct: 357 VLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKC----------------- 399
Query: 325 SFSISSMIVGYSLQGNMEEARRHFD--SLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF 382
G +E AR+ FD S+ ++VV W + + Y + L E
Sbjct: 400 --------------GELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDE- 444
Query: 383 VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR-MGVQMDKKLISTLVDMYSKCG 441
+ G D + + LL AC+ + G ++ ++R +++ + + LVD++ + G
Sbjct: 445 MQALGFRPDNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRAG 504
Query: 442 NMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
+ A + ++ ++ ++A HGH + L E++LE
Sbjct: 505 RLQEAFDFIKGLEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLE 550
>gi|226531155|ref|NP_001148193.1| methyltransferase small domain [Zea mays]
gi|195616632|gb|ACG30146.1| methyltransferase small domain [Zea mays]
Length = 656
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 194/635 (30%), Positives = 322/635 (50%), Gaps = 21/635 (3%)
Query: 13 HVQAIKAGLTLTTI-TTNQLIHIYSK-HNLLRESRKLFDEMPE--RNVFSWNTIISACIK 68
H A K+GL + + N ++ YS+ + L + +LFDE P R+ + N+I++A +
Sbjct: 29 HALAAKSGLLASNVFVRNSVLSSYSRLPSSLASALQLFDETPPPLRDATARNSILAALTR 88
Query: 69 SHDLKQARSLFDSSP--HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEF 126
+ L +A+ L + P H+D V+Y +++ + A G+ A A+ +F M S E++ +E
Sbjct: 89 AGHLDRAQGLLEEMPRIHRDAVSYTTLVTAFARA-GHAARAVAVFRSMLS--ENVVPNEA 145
Query: 127 TVTSTLNL---CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
T+ + C VG +H F ++ + D ++L+ Y+ A +F
Sbjct: 146 TLAGAITAFARCGAPATVGM---IHGFALQRALDGFVIVATNLVHAYAGVLELCSARALF 202
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
+G T N ++ N M+ + ++MA + FWR PE D VSW TLI GY+ +
Sbjct: 203 DGMTHR-NTVTWNVMLNGYVKAKMIDMAAEVFWRIPE-RDEVSWLTLIDGYICADLISDA 260
Query: 244 LKLFVRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
+K +V+M GE G E + AC V +++H+ +LKNG + FV + +V
Sbjct: 261 MKAYVQMVGEVGANDYEVLLVDLMKACARYSAVTEGQQLHTVILKNGFDALAFVQATLVH 320
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
Y C + A+ L ++ S ++++ G + EAR FD + E++ V W+ +
Sbjct: 321 FYGCCGLIGLAQMTFRLSDKSHTASWNALLAALLRNGLIREARELFDDMPERDTVSWSTM 380
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
SGYV+ + L + + + + L L A A L GK IH YI+
Sbjct: 381 ISGYVQTGRSDMALKLFYSMLNTS-IEPNEVTLASALSAIADSGTLDQGKWIHDYIMNRP 439
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER--DLVLYNVMIACYAHHGHEEKAILL 480
VQ+ L S L+DMY+KCG++ A F ++ + +N MI A HG+ ++ L
Sbjct: 440 VQLTDNLSSGLIDMYAKCGSIADAVQFFNRVNDKFSSVSPWNAMICSLAIHGYAHMSLDL 499
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
F ++ IKP+++TF+ +LSA H G+V G+ YF SMT +Y I P HY CM+DL G
Sbjct: 500 FSQLQRTSIKPNSITFIGVLSACCHAGTVTKGKYYFESMTREYGIQPTIKHYGCMVDLLG 559
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQ 600
RA LE+A + + +P + D VI GS L+ R N L A E+L +L+ + A +
Sbjct: 560 RAGYLEEAEQLVSMMPMKPDVVIWGSILSASRAQGNVALGERAAEELAKLDQTHGASKIA 619
Query: 601 LANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWV 635
L+N+YA G+W + +RK+++ R G S +
Sbjct: 620 LSNIYADAGHWTNVSVVRKELQDANLERLTGRSGI 654
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/236 (19%), Positives = 109/236 (46%), Gaps = 13/236 (5%)
Query: 275 VKCAKEIHSWVLKNGLI-SNPFVSSGIVDVYCKCENMNYAESMLLL----KGVRNSFSIS 329
++C +++H+ K+GL+ SN FV + ++ Y + + + A ++ L +R++ + +
Sbjct: 22 LRCGEQLHALAAKSGLLASNVFVRNSVLSSYSRLPS-SLASALQLFDETPPPLRDATARN 80
Query: 330 SMIVGYSLQGNMEEARRHFDSLTE--KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEG 387
S++ + G+++ A+ + + ++ V +T L + + +A + + ++ E
Sbjct: 81 SILAALTRAGHLDRAQGLLEEMPRIHRDAVSYTTLVTAFARAGHAARAVAVFRSMLS-EN 139
Query: 388 VVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAE 447
VV + L + A A A IH + L+ + + + LV Y+ + A
Sbjct: 140 VVPNEATLAGAITAFARCGAPATVGMIHGFALQRALDGFVIVATNLVHAYAGVLELCSAR 199
Query: 448 IIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAF 503
+F R+ V +NVM+ Y + A +F + E+ D V+++ ++ +
Sbjct: 200 ALFDGMTHRNTVTWNVMLNGYVKAKMIDMAAEVFWRIPER----DEVSWLTLIDGY 251
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 177/604 (29%), Positives = 306/604 (50%), Gaps = 41/604 (6%)
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I + D +AR LFD+ P D T ++++ + G +A+K++ +Q + I
Sbjct: 18 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISA-LTTHGLSNEAIKIYSSLQ--ERGI 74
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+ D + C + +++H + + F ++LI Y KC+C E A R
Sbjct: 75 KPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARR 134
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
VF+ +L+ + D VSW +L S YV+ G
Sbjct: 135 VFD------DLV---------------------------VRDVVSWTSLSSCYVKCGFPR 161
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
+G+ +F MG +GV+ N T +S L AC L+++K KEIH + +++G++ N FV S +V
Sbjct: 162 KGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALV 221
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNV----V 357
+Y KC ++ A + L R+ S + ++ Y E+ F ++ V
Sbjct: 222 SLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEA 281
Query: 358 VWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
W A+ G ++ E ++ + + K G + + + +L AC+ L GKEIH Y
Sbjct: 282 TWNAVIGGCMENGRSEEAVEMFRK-MQKMGFKPNEITISSILPACSFSENLRMGKEIHCY 340
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
+ R D + L+ MY+KCG++ + +F +D+V +N MI A HG+ ++A
Sbjct: 341 VFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEA 400
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID 537
+ LF++ML ++P++VTF +LS H VE G + FNSM D+ + P+ +HY+C++D
Sbjct: 401 LFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVD 460
Query: 538 LYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKAR 597
+Y RA +L +A +F++ +P E A G+ L CR+ +N ELA + +KL +E NN
Sbjct: 461 IYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGN 520
Query: 598 YVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
YV L N+ W+E ++R M+ + GCSW+ V +++H F VGD S+ +++ I
Sbjct: 521 YVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIESDKI 580
Query: 658 YSVL 661
Y+ L
Sbjct: 581 YNFL 584
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 178/370 (48%), Gaps = 45/370 (12%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTI 62
+L +KE H A + G+ N LIH Y K + +R++FD++ R+V SW ++
Sbjct: 94 ALRVKEV---HDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSL 150
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
S +K G+ + +F EM + ++
Sbjct: 151 SSCYVKC--------------------------------GFPRKGMDVFREMGWSG--VK 176
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
+ TV+S L C +L ++ G+++H F V+ + F S+L+ +Y+KC EA V
Sbjct: 177 PNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMV 236
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFW---RQPELNDAVSWNTLISGYVQNGD 239
F+ +++S N ++ A + E E F R D +WN +I G ++NG
Sbjct: 237 FD-LMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGR 295
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
+EE +++F +M + G + NE T +S L AC N++ KEIH +V ++ + + ++
Sbjct: 296 SEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTA 355
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFD----SLTEKN 355
++ +Y KC ++N + ++ + ++ + ++MI+ ++ GN +EA FD S + N
Sbjct: 356 LLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPN 415
Query: 356 VVVWTALFSG 365
V +T + SG
Sbjct: 416 SVTFTGVLSG 425
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 150/316 (47%), Gaps = 45/316 (14%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+LK H A++ G+ + + L+ +Y+K +RE+R +FD MP R+V SWN +++
Sbjct: 194 DLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLT 253
Query: 65 ACIKSHDLKQARSLF----DSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
A K+ + ++ SLF D T+N+++ G + G +A+++F +MQ
Sbjct: 254 AYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCME-NGRSEEAVEMFRKMQKMG-- 310
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
+ +E T++S L C N+ G+++H ++ + + ++L+ MY+KC
Sbjct: 311 FKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKC------- 363
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
G++ ++ F D V+WNT+I +G+
Sbjct: 364 -------------------------GDLNLSRNVF-DMMRRKDVVAWNTMIIANAMHGNG 397
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI---SNPFVS 297
+E L LF +M + V+ N TF LS C R V+ +I + + ++ L+ +N +
Sbjct: 398 KEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHY-- 455
Query: 298 SGIVDVYCKCENMNYA 313
S +VD+Y + +N A
Sbjct: 456 SCVVDIYSRAGRLNEA 471
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 111/250 (44%), Gaps = 20/250 (8%)
Query: 18 KAGLTLTTITTNQLIHIYSKHNLLRESRKL----FDEMPERNVFSWNTIISACIKSHDLK 73
K G IT + ++ S LR +++ F ++ S ++ K DL
Sbjct: 308 KMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLN 367
Query: 74 QARSLFDSSPHKDLVTYNSMLCGYINA-EGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+R++FD KD+V +N+M+ NA G +AL LF +M + ++ + T T L
Sbjct: 368 LSRNVFDMMRRKDVVAWNTMIIA--NAMHGNGKEALFLFDKMLLS--RVQPNSVTFTGVL 423
Query: 133 NLCVKLLNVGFGRQLHAFMVK---TSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEE 189
+ C V G Q+ M + DA+ + S ++D+YS+ EA + +G E
Sbjct: 424 SGCSHSRLVEEGVQIFNSMGRDHLVEPDANHY--SCVVDIYSRAGRLNEAYKFIQGMPME 481
Query: 190 VNLISKNAMVAACCREGEMEM----ALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
+ A++AAC +E+ A K F +P N+ ++ +L + V E +
Sbjct: 482 PTASAWGALLAACRVYKNVELAKISAKKLFEIEP--NNPGNYVSLFNILVTAKMWSEASQ 539
Query: 246 LFVRMGENGV 255
+ + M E G+
Sbjct: 540 VRILMKERGI 549
>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 834
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 189/606 (31%), Positives = 311/606 (51%), Gaps = 74/606 (12%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N +I + +K + A LF+ P+K+++++ ++L GY +A++LF M
Sbjct: 288 NVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGY-KQNALHKEAMELFTSMSKFG- 345
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
++ D + +S L C L +GFG Q+HA+ +K + + +SLIDMY+KC C +A
Sbjct: 346 -LKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDA 404
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG- 238
+VF+ + AA D V +N +I GY + G
Sbjct: 405 RKVFD-------------IFAAA--------------------DVVLFNAMIEGYSRLGT 431
Query: 239 --DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFV 296
+ E L +F M +R + TF S L A L ++ +K+IH + K GL + F
Sbjct: 432 QWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFA 491
Query: 297 SSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNV 356
S ++DVY C Y L+ ++R FD + K++
Sbjct: 492 GSALIDVYSNC---------------------------YCLK----DSRLVFDEMKVKDL 520
Query: 357 VVWTALFSGYV-KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIH 415
V+W ++F+GYV +++N EAL L +++E D ++ A A++ G+E H
Sbjct: 521 VIWNSMFAGYVQQSENEEALNLFLELQLSRER--PDEFTFANMVTAAGNLASVQLGQEFH 578
Query: 416 AYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEE 475
+L+ G++ + + + L+DMY+KCG+ A F + RD+V +N +I+ YA+HG +
Sbjct: 579 CQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGK 638
Query: 476 KAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACM 535
KA+ + E+M+ +GI+P+ +TFV +LSA H G VE G K F M + I PET+HY CM
Sbjct: 639 KALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCM 697
Query: 536 IDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNK 595
+ L GRA +L KA E ++ +PT+ A++ S L+ C N ELA A E + + +
Sbjct: 698 VSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDS 757
Query: 596 ARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTN 655
+ L+N+YA++G W E ++R++M+ + G SW+ + E+HIF D SH K N
Sbjct: 758 GSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKAN 817
Query: 656 AIYSVL 661
IY VL
Sbjct: 818 QIYEVL 823
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 122/500 (24%), Positives = 232/500 (46%), Gaps = 74/500 (14%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
+R+V+ +I +K ++ AR +FD+ P K VT+ +M+ G + G +L+LF
Sbjct: 180 DRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKM-GRSYVSLQLFY 238
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
++ ++++ D + +++ L+ C L + G+Q+HA +++ + ++ LID Y K
Sbjct: 239 QLM--EDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVK 296
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C G + A K F P N +SW TL+S
Sbjct: 297 C--------------------------------GRVIAAHKLFNGMPNKN-IISWTTLLS 323
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
GY QN +E ++LF M + G++ + + +S L++C L + ++H++ +K L +
Sbjct: 324 GYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGN 383
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
+ +V++ ++D+Y KC+ + +AR+ FD
Sbjct: 384 DSYVTNSLIDMYAKCDCLT-------------------------------DARKVFDIFA 412
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEF--VTKEGVVTDALILVILLGACALQAALHP 410
+VV++ A+ GY + L + L+ F + + L V LL A A +L
Sbjct: 413 AADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGL 472
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
K+IH + + G+ +D S L+D+YS C + + ++F +DLV++N M A Y
Sbjct: 473 SKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQ 532
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD 530
E+A+ LF E+ +PD TF +++A + SV++G+++ + K E +
Sbjct: 533 QSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLL---KRGLECN 589
Query: 531 HYA--CMIDLYGRANQLEKA 548
Y ++D+Y + E A
Sbjct: 590 PYITNALLDMYAKCGSPEDA 609
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 179/370 (48%), Gaps = 51/370 (13%)
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
E++ N ++ R G M A K F + PE N VSW+T++S +G EE L +F+
Sbjct: 76 ELDTYLSNILINLYSRAGGMVYARKVFEKMPERN-LVSWSTMVSACNHHGIYEESLVVFL 134
Query: 249 ---RMGENGVRWNEHTFASALSACCGL--RNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
R ++ NE+ +S + AC GL R ++ S+++K+G + +V + ++D
Sbjct: 135 EFWRTRKDSP--NEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDF 192
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y K GN++ AR FD+L EK+ V WT +
Sbjct: 193 YLK-------------------------------DGNIDYARLVFDALPEKSTVTWTTMI 221
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
SG VK L + + ++ VV D IL +L AC++ L GK+IHA+ILR G+
Sbjct: 222 SGCVKMGRSYVSLQLFYQLM-EDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGL 280
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
+MD L++ L+D Y KCG + A +F ++++ + +++ Y + ++A+ LF
Sbjct: 281 EMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTS 340
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVE-MGEKYFNSMTADYKISPE--TDHYAC--MIDL 538
M + G+KPD +IL++ C S+ +G F + Y I D Y +ID+
Sbjct: 341 MSKFGLKPDMYACSSILTS---CASLHALG---FGTQVHAYTIKANLGNDSYVTNSLIDM 394
Query: 539 YGRANQLEKA 548
Y + + L A
Sbjct: 395 YAKCDCLTDA 404
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 155/393 (39%), Gaps = 106/393 (26%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
+ SL L + + H K GL L + LI +YS L++SR +FDEM +++ WN
Sbjct: 467 LTSLGLSKQI--HGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWN 524
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
SM GY+ E +AL LF+E+Q + E
Sbjct: 525 -------------------------------SMFAGYVQQSENE-EALNLFLELQLSRE- 551
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
R DEFT + + L +V G++ H ++K + + + ++L+DMY+KC E+A
Sbjct: 552 -RPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAH 610
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+ F+ D V WN++IS Y +G+
Sbjct: 611 KAFDSAASR---------------------------------DVVCWNSVISSYANHGEG 637
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
++ L++ +M G+ N TF LSAC H+ ++++GL
Sbjct: 638 KKALQMLEKMMSEGIEPNYITFVGVLSACS-----------HAGLVEDGL---------- 676
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL-TEKNVVVW 359
E ML + M+ G + +AR + + T+ +VW
Sbjct: 677 ----------KQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVW 726
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDA 392
+L SG KA N E L+E + +++D
Sbjct: 727 RSLLSGCAKAGNVE-----LAEHAAEMAILSDP 754
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 83/168 (49%), Gaps = 7/168 (4%)
Query: 408 LHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIAC 467
LH +H I+ G+++D L + L+++YS+ G M YA +F+ ER+LV ++ M++
Sbjct: 60 LHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSA 119
Query: 468 YAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKY--FNSMTADYKI 525
HHG E+++++F E + D+ + S + C ++ ++ F + K
Sbjct: 120 CNHHGIYEESLVVFLEFWRT--RKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKS 177
Query: 526 SPETDHY--ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVC 571
+ D Y +ID Y + ++ A ++P E+ V + ++ C
Sbjct: 178 GFDRDVYVGTLLIDFYLKDGNIDYARLVFDALP-EKSTVTWTTMISGC 224
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 175/568 (30%), Positives = 296/568 (52%), Gaps = 40/568 (7%)
Query: 106 DALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS 165
+AL ++ +++ D +D F S L C ++ G+++H F++K D F ++
Sbjct: 107 NALNVYAQLRKMD--FEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNA 164
Query: 166 LIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAV 225
L+ MY +C C E A VF+ E D V
Sbjct: 165 LMLMYGECACVEYARLVFDKMMER---------------------------------DVV 191
Query: 226 SWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWV 285
SW+T+I +N + + L+L M VR +E S ++ N++ K +H++V
Sbjct: 192 SWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYV 251
Query: 286 LKNG---LISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNME 342
++N + P ++ ++D+Y KC ++ A + + S ++MI G +E
Sbjct: 252 IRNSNNEHMGVP-TTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLE 310
Query: 343 EARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGAC 402
EAR FDS ++V++WTA+ S Y +A + F+L + T GV + +V LL C
Sbjct: 311 EARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRT-SGVRPTKVTIVSLLSLC 369
Query: 403 ALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYN 462
A+ AL GK +H+YI + V++D L + LVDMY+KCG++ A +F I RD+ ++N
Sbjct: 370 AVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWN 429
Query: 463 VMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTAD 522
+I +A HG+ E+A+ +F EM +G+KP+ +TF+ +L A H G V G+K F M
Sbjct: 430 AIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHT 489
Query: 523 YKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGE 582
+ + P+ +HY CM+DL GRA L++A E +KS+P + + ++ G+ + CRL++N +L
Sbjct: 490 FGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGEL 549
Query: 583 AEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIH 642
A +LL +E N V ++N+YAA W++ +RK M+ + + G S + V +H
Sbjct: 550 AATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVH 609
Query: 643 IFTVGDVSHPKTNAIYSVLAIFTGELYE 670
F +GD SHP+ I +LA +L E
Sbjct: 610 EFLMGDQSHPQIRRINEMLAEMRRKLNE 637
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 129/548 (23%), Positives = 237/548 (43%), Gaps = 107/548 (19%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K GL N L+ +Y + + +R +FD+M ER+V SW+T+I + ++ +
Sbjct: 147 HGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKE- 205
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
FD AL+L EM +R E + S +
Sbjct: 206 ------FDM-------------------------ALELIREMNFM--QVRPSEVAMVSMV 232
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDAS-GFAVSS-LIDMYSKCRCYEEACRVFEGCTEEV 190
NL N+ G+ +HA++++ SN+ G ++ L+DMY+KC A ++F G T++
Sbjct: 233 NLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKT 292
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
++S AM+A C R +E A + + + D + W ++S Y Q ++ LF +M
Sbjct: 293 -VVSWTAMIAGCIRSNRLEEA-RALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQM 350
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
+GVR + T S LS C + K +HS++ K + + +++ +VD+Y KC ++
Sbjct: 351 RTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDI 410
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
N A + + R+ +++I G+++ G EEA
Sbjct: 411 NAAGRLFIEAISRDICMWNAIITGFAMHGYGEEA-------------------------- 444
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
D+ +E + ++GV + + + LL AC+ HA ++ G KKL
Sbjct: 445 -----LDIFAE-MERQGVKPNDITFIGLLHACS-----------HAGLVTEG----KKLF 483
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+V + + + Y M+ G ++A + + M IK
Sbjct: 484 EKMVHTFGLVPQIEH---------------YGCMVDLLGRAGLLDEAHEMIKSM---PIK 525
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY-ACMIDLYGRANQLEKAI 549
P+ + + A+++A R + ++GE + T +I PE Y M ++Y AN+ A
Sbjct: 526 PNTIVWGALVAACRLHKNPQLGEL---AATQLLEIEPENCGYNVLMSNIYAAANRWSDAA 582
Query: 550 EFMKSIPT 557
K++ T
Sbjct: 583 GVRKTMKT 590
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 154/365 (42%), Gaps = 74/365 (20%)
Query: 221 LNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKE 280
L+ + WN +I+ Y + L ++ ++ + + S L AC + + KE
Sbjct: 86 LSPSAQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKE 145
Query: 281 IHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGN 340
IH +VLK GL + FV + ++ +Y +C + Y
Sbjct: 146 IHGFVLKKGLDRDVFVGNALMLMYGECACVEY---------------------------- 177
Query: 341 MEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLG 400
AR FD + E++VV W+ + + + + +L+ E + V + +V ++
Sbjct: 178 ---ARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQ-VRPSEVAMVSMVN 233
Query: 401 ACALQAALHPGKEIHAYILR------MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFI 454
A A + GK +HAY++R MGV + L+DMY+KCG++ A +F
Sbjct: 234 LFADTANMRMGKAMHAYVIRNSNNEHMGV----PTTTALLDMYAKCGHLGLARQLFNGLT 289
Query: 455 E-------------------------------RDLVLYNVMIACYAHHGHEEKAILLFEE 483
+ RD++++ M++ YA ++A LF++
Sbjct: 290 QKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQ 349
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRAN 543
M G++P VT V++LS G++++G K+ +S ++ + ++D+Y +
Sbjct: 350 MRTSGVRPTKVTIVSLLSLCAVAGALDLG-KWVHSYIDKERVEVDCILNTALVDMYAKCG 408
Query: 544 QLEKA 548
+ A
Sbjct: 409 DINAA 413
>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 169/549 (30%), Positives = 284/549 (51%), Gaps = 34/549 (6%)
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
HI + + L C+ ++ G+QLH+ ++ + + F + L+++YSKC + A
Sbjct: 47 HIWSEPSLFSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTA 106
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
+F G N++S N ++ R G+ A K F PE N A +WN +++G +Q
Sbjct: 107 ITLF-GVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVA-TWNAMVAGLIQFEF 164
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
EEGL LF RM E G +E S L C GLR + +++H +V K G N V S
Sbjct: 165 NEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSS 224
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
+ +Y KC G++ E R ++ +NVV W
Sbjct: 225 LAHMYMKC-------------------------------GSLGEGERLIRAMPSQNVVAW 253
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
L +G + E + D + + G D + V ++ +C+ A L G++IHA ++
Sbjct: 254 NTLIAGRAQNGYPEEVLDQYN-MMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVI 312
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
+ G + +IS+L+ MYS+CG + Y+ +F D+V ++ MIA Y HG +AI
Sbjct: 313 KAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAID 372
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
LF +M ++ ++ + VTF+++L A HCG E G K+F+ M Y + P +HY CM+DL
Sbjct: 373 LFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLL 432
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYV 599
GR +E+A ++S+P + D + + L+ C++++ E+A E++ RL+ + YV
Sbjct: 433 GRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMARRISEEVFRLDPRDPVPYV 492
Query: 600 QLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYS 659
L+N++A++ W ++ +RK MR K + G SW+ V+++IH F +GD SHPK+ I S
Sbjct: 493 LLSNIHASDKRWDDVSDVRKAMRDRKLKKEPGISWLEVKNQIHQFCMGDKSHPKSVEIAS 552
Query: 660 VLAIFTGEL 668
L T E+
Sbjct: 553 YLRELTSEM 561
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 132/501 (26%), Positives = 224/501 (44%), Gaps = 77/501 (15%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTI 62
SL+L + L H I +G + +N L+++YSK L + LF MP +N+ S N +
Sbjct: 67 SLSLGKQL--HSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNIL 124
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
I+ +S D AR +FD P +++ T+N+M+ G I E + + L LF M
Sbjct: 125 INGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFE-FNEEGLGLFSRMNELG--FL 181
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
DEF + S L C L + GRQ+H ++ K + + VSSL MY KC E R+
Sbjct: 182 PDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERL 241
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
+ + V+WNTLI+G QNG EE
Sbjct: 242 IRAMPSQ---------------------------------NVVAWNTLIAGRAQNGYPEE 268
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
L + M G R ++ TF S +S+C L + ++IH+ V+K G +S IV
Sbjct: 269 VLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAG-------ASLIVS 321
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
V ISS+I YS G +E + + F +VV W+++
Sbjct: 322 V------------------------ISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSM 357
Query: 363 FSGY-VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG-KEIHAYILR 420
+ Y + EA+ DL ++ + +E + + + + LL AC+ G K + +
Sbjct: 358 IAAYGFHGRGVEAI-DLFNQ-MEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEK 415
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKAIL 479
GV+ + + +VD+ + G++ AE + ++ ++ D++ + +++ H E A
Sbjct: 416 YGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMARR 475
Query: 480 LFEEMLEKGIKP-DAVTFVAI 499
+ EE+ + P D V +V +
Sbjct: 476 ISEEVFR--LDPRDPVPYVLL 494
>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Glycine max]
Length = 916
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 195/614 (31%), Positives = 313/614 (50%), Gaps = 70/614 (11%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
N+F N +I K+ LK+A F+ ++D +++N+++ GY+ E EA A LF M
Sbjct: 352 NLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEE-VEAGAFSLFRRM 410
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
+ I DE ++ S L+ C + + G+Q H VK + + FA SSLIDMYSKC
Sbjct: 411 --ILDGIVPDEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKC- 467
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
G+++ A KT+ PE VS N LI+GY
Sbjct: 468 -------------------------------GDIKDAHKTYSSMPE-RSVVSVNALIAGY 495
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI-SN 293
+ +E + L M G++ +E TFAS + C G V +IH ++K GL+ +
Sbjct: 496 ALK-NTKESINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGS 554
Query: 294 PFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
F+ + ++ +Y + + A++ +L F SL
Sbjct: 555 EFLGTSLLGMYMDSQRL--ADANILFS--------------------------EFSSL-- 584
Query: 354 KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
K++V+WTAL SG+++ + + +L E + + D V +L ACAL ++LH G+E
Sbjct: 585 KSIVMWTALISGHIQNECSDVALNLYRE-MRDNNISPDQATFVTVLQACALLSSLHDGRE 643
Query: 414 IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHG 472
IH+ I G +D+ S LVDMY+KCG++ + +F+ ++D++ +N MI +A +G
Sbjct: 644 IHSLIFHTGFDLDELTSSALVDMYAKCGDVKSSVQVFEELATKKDVISWNSMIVGFAKNG 703
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
+ + A+ +F+EM + I PD VTF+ +L+A H G V G + F+ M Y I P DHY
Sbjct: 704 YAKCALKVFDEMTQSCITPDDVTFLGVLTACSHAGWVYEGRQIFDVMVNYYGIEPRVDHY 763
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
ACM+DL GR L++A EF+ + E +A+I + L CR++ + + A +KL+ LE
Sbjct: 764 ACMVDLLGRWGFLKEAEEFIDKLEVEPNAMIWANLLGACRIHGDEKRGQRAAKKLIELEP 823
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
+ + YV L+N+YAA GNW E +R+ M + GCSW+ V E ++F GD+SH
Sbjct: 824 QSSSPYVLLSNMYAASGNWDEARSLRRTMIKKDIQKIPGCSWIVVGQETNLFVAGDISHS 883
Query: 653 KTNAIYSVLAIFTG 666
+ I L T
Sbjct: 884 SYDEISKALKHLTA 897
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 140/550 (25%), Positives = 247/550 (44%), Gaps = 109/550 (19%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLF--DEMPERNVFS 58
+++L+L A+ H IK+GL T+ LIH+Y+K N L +R +F P + S
Sbjct: 60 LQNLHLGRAV--HSCVIKSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVS 117
Query: 59 WNTIISACIKSHDLKQARSLFDSS------------------------------------ 82
W +IS +++ +A +FD
Sbjct: 118 WTALISGYVQAGLPHEALHIFDKMRNSAVPDQVALVTVLNAYISLGKLDDACQLFQQMPI 177
Query: 83 PHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVG 142
P +++V +N M+ G+ YE +AL F +M + ++ T+ S L+ L +
Sbjct: 178 PIRNVVAWNVMISGHAKTAHYE-EALAFFHQM--SKHGVKSSRSTLASVLSAIASLAALN 234
Query: 143 FGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAAC 202
G +HA +K ++S + SSLI+MY KC+ ++A +VF+ ++ KN +V
Sbjct: 235 HGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQ------KNMIV--- 285
Query: 203 CREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTF 262
WN ++ Y QNG ++LF+ M G+ +E T+
Sbjct: 286 ------------------------WNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTY 321
Query: 263 ASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGV 322
S LS C ++ +++HS ++K SN FV++ ++D+Y K
Sbjct: 322 TSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKA--------------- 366
Query: 323 RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF 382
G ++EA +HF+ +T ++ + W A+ GYV+ + F L
Sbjct: 367 ----------------GALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRM 410
Query: 383 VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGN 442
+ +G+V D + L +L AC L G++ H +++G++ + S+L+DMYSKCG+
Sbjct: 411 IL-DGIVPDEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGD 469
Query: 443 MTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
+ A + + ER +V N +IA YA +E +I L EM G+KP +TF +++
Sbjct: 470 IKDAHKTYSSMPERSVVSVNALIAGYALKNTKE-SINLLHEMQILGLKPSEITFASLIDV 528
Query: 503 FRHCGSVEMG 512
+ V +G
Sbjct: 529 CKGSAKVILG 538
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/471 (24%), Positives = 218/471 (46%), Gaps = 73/471 (15%)
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
D+FT TL+ C KL N+ GR +H+ ++K+ +++ F +LI +Y+KC A +F
Sbjct: 46 DQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGALIHLYAKCNSLTCARTIF 105
Query: 184 EGCT-EEVNLISKNAMVAACCRE----------------------------------GEM 208
++ +S A+++ + G++
Sbjct: 106 ASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRNSAVPDQVALVTVLNAYISLGKL 165
Query: 209 EMALKTFWRQP-ELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALS 267
+ A + F + P + + V+WN +ISG+ + EE L F +M ++GV+ + T AS LS
Sbjct: 166 DDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLS 225
Query: 268 ACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFS 327
A L + +H+ +K G S+ +V+S ++++Y KC+
Sbjct: 226 AIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQ------------------- 266
Query: 328 ISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEG 387
++AR+ FD++++KN++VW A+ Y + + +L + ++ G
Sbjct: 267 ------------MPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISC-G 313
Query: 388 VVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAE 447
+ D +L CA L G+++H+ I++ + + + L+DMY+K G + A
Sbjct: 314 IHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAG 373
Query: 448 IIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCG 507
F++ RD + +N +I Y E A LF M+ GI PD V+ +ILSA CG
Sbjct: 374 KHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSA---CG 430
Query: 508 SVEMGEKYFNSMTADYKISPETDHYA--CMIDLYGRANQLEKAIEFMKSIP 556
++++ E K+ ET+ +A +ID+Y + ++ A + S+P
Sbjct: 431 NIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMP 481
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 164/360 (45%), Gaps = 41/360 (11%)
Query: 227 WNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVL 286
WN + G ++ +E L+ + +G ++ TFA LSAC L+N+ + +HS V+
Sbjct: 16 WNWRVQG-TKHYSSERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVI 74
Query: 287 KNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSIS--SMIVGYSLQGNMEEA 344
K+GL S F ++ +Y KC ++ A ++ + ++S ++I GY G EA
Sbjct: 75 KSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEA 134
Query: 345 RRHFDSLTE------------------------------------KNVVVWTALFSGYVK 368
FD + +NVV W + SG+ K
Sbjct: 135 LHIFDKMRNSAVPDQVALVTVLNAYISLGKLDDACQLFQQMPIPIRNVVAWNVMISGHAK 194
Query: 369 AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK 428
+ E + ++K GV + L +L A A AAL+ G +HA+ ++ G +
Sbjct: 195 TAHYEEALAFFHQ-MSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSIY 253
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
+ S+L++MY KC A +F +++++++N M+ Y+ +G + LF +M+ G
Sbjct: 254 VASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCG 313
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
I PD T+ +ILS +E+G + +S + + +ID+Y +A L++A
Sbjct: 314 IHPDEFTYTSILSTCACFEYLEVGRQ-LHSAIIKKRFTSNLFVNNALIDMYAKAGALKEA 372
>gi|255553249|ref|XP_002517667.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543299|gb|EEF44831.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 628
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 186/533 (34%), Positives = 287/533 (53%), Gaps = 46/533 (8%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
++S +L++ H + IK N+LI Y K ++RK+FD+MPE+NVFSWN
Sbjct: 30 LKSKSLRDTRRIHARIIKTQFAYEVFIQNRLIDAYGKCGCFDDARKIFDQMPEKNVFSWN 89
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
I+S +KS L + LF S P D ++NS++ G+ + +E +AL F++M +
Sbjct: 90 AIVSTLVKSGFLDEGARLFVSMPEPDQCSWNSLIAGFAQHDRFE-EALNYFVKMHR--KG 146
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
++E+T S L+ C L ++ G Q+H M+K+ + S+LID+YSKC + A
Sbjct: 147 FVLNEYTFGSGLSACAGLKDLKIGTQIHGLMLKSQFLLDVYMGSALIDIYSKCGFVDCAQ 206
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
RVF+G E N++S W N+LI+ Y QNG +
Sbjct: 207 RVFDGMMER-NVVS---------------------W-----------NSLITCYEQNGPS 233
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFV-SSG 299
E L++F+RM E+G +E T AS +SAC L K EIH+ V+K + + + S+
Sbjct: 234 REALEIFMRMMESGFEPDEVTLASVVSACASLAAAKQGLEIHACVVKRDKLRDDLILSNA 293
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
+VD+Y KC +N A + +RN S +SM+ GY+ +++ AR F + E+NVV W
Sbjct: 294 LVDMYAKCGRINEARCVFDRMPIRNVVSETSMVSGYAKTASVKAARLLFTKMIERNVVSW 353
Query: 360 TALFSGYVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
AL +GY + +N EAL L + +E + LL ACA A L G++ HA++
Sbjct: 354 NALIAGYTQNGENEEAL--RLFRMLKREAICPTHYTFGNLLNACANLADLQLGRQAHAHV 411
Query: 419 LRMGVQM------DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
L+ G + D + + L+DMY KCG++ IF+N +ERD V +N MI YA +G
Sbjct: 412 LKHGFRFQYGEESDVFVGNALIDMYMKCGSVEEGCRIFENMVERDYVSWNAMIVGYAQNG 471
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKI 525
+ +A+ LF +ML G KPD VT + L A H G V+ G K+F+SMT +Y +
Sbjct: 472 YGMEALGLFRKMLASGEKPDHVTMIGALCACSHAGLVQEGRKHFSSMTEEYGL 524
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 131/477 (27%), Positives = 227/477 (47%), Gaps = 72/477 (15%)
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
+D L+ C+K ++ R++HA ++KT F + LID Y KC C+++A ++
Sbjct: 17 LDSSPFAKLLDSCLKSKSLRDTRRIHARIIKTQFAYEVFIQNRLIDAYGKCGCFDDARKI 76
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
F+ E+ N+ S NA+V+ + G ++ + F PE D SWN+LI+G+ Q+ EE
Sbjct: 77 FDQMPEK-NVFSWNAIVSTLVKSGFLDEGARLFVSMPE-PDQCSWNSLIAGFAQHDRFEE 134
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
L FV+M G NE+TF S LSAC GL+++K +IH +LK+ + + ++ S ++D
Sbjct: 135 ALNYFVKMHRKGFVLNEYTFGSGLSACAGLKDLKIGTQIHGLMLKSQFLLDVYMGSALID 194
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
+Y KC G ++ A+R FD + E+NVV W +L
Sbjct: 195 IYSKC-------------------------------GFVDCAQRVFDGMMERNVVSWNSL 223
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
+ Y + ++ + + G D + L ++ ACA AA G EIHA +++
Sbjct: 224 ITCYEQNGPSREALEIFMRMM-ESGFEPDEVTLASVVSACASLAAAKQGLEIHACVVKRD 282
Query: 423 VQMDKKLIS-TLVDMYSKCGNMT-------------------------------YAEIIF 450
D ++S LVDMY+KCG + A ++F
Sbjct: 283 KLRDDLILSNALVDMYAKCGRINEARCVFDRMPIRNVVSETSMVSGYAKTASVKAARLLF 342
Query: 451 QNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVE 510
IER++V +N +IA Y +G E+A+ LF + + I P TF +L+A + ++
Sbjct: 343 TKMIERNVVSWNALIAGYTQNGENEEALRLFRMLKREAICPTHYTFGNLLNACANLADLQ 402
Query: 511 MGEKYFNSMTAD---YKISPETDHYA--CMIDLYGRANQLEKAIEFMKSIPTEEDAV 562
+G + + ++ E+D + +ID+Y + +E+ +++ E D V
Sbjct: 403 LGRQAHAHVLKHGFRFQYGEESDVFVGNALIDMYMKCGSVEEGCRIFENM-VERDYV 458
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 201/678 (29%), Positives = 327/678 (48%), Gaps = 86/678 (12%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
M+S +K + + + A + ++IH ++LR K N N
Sbjct: 422 MQSEGVKPGRVTFLHLLSACANSSAYADGKMIH----EDILRSGIK-------SNGHLAN 470
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
+++ + L +A+++F+ + +D++++NSM+ G+ YE A KLF EMQ +E
Sbjct: 471 ALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYET-AYKLFQEMQ--NEE 527
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
+ D T S L+ C + G+Q+H + ++ ++LI+MY +C ++A
Sbjct: 528 LEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDAR 587
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
VF D +SW +I G G+
Sbjct: 588 NVFHSLQHR---------------------------------DVMSWTAMIGGCADQGED 614
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
+ ++LF +M G R + TF+S L C + K++ +++L +G
Sbjct: 615 MKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGY---------- 664
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
L GV N+ +I YS G+M +AR FD + +++V W
Sbjct: 665 ----------------ELDTGVGNA-----LISAYSKSGSMTDAREVFDKMPSRDIVSWN 703
Query: 361 ALFSGYVKAQNCEALFDLLSEF---VTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
+ +GY AQN L EF + ++ VV + V LL AC+ +AL GK +HA
Sbjct: 704 KIIAGY--AQN--GLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAE 759
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
I++ +Q D ++ + L+ MY+KCG+ A+ +F N IE+++V +N MI YA HG KA
Sbjct: 760 IVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKA 819
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID 537
+ F M ++GIKPD TF +ILSA H G V G + F+SM ++Y + P +HY C++
Sbjct: 820 LGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVG 879
Query: 538 LYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKAR 597
L GRA + ++A + +P DA + + L CR++ N LA A L+L N A
Sbjct: 880 LLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAV 939
Query: 598 YVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
Y+ L+NVYAA G W ++ +IR+ M G + G SW+ V++ IH F D SHP+T I
Sbjct: 940 YILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEI 999
Query: 658 YSVLAIFTGELYEIAGAF 675
Y+ L + E+ E AG F
Sbjct: 1000 YAELKRLSVEMEE-AGYF 1016
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 143/610 (23%), Positives = 258/610 (42%), Gaps = 121/610 (19%)
Query: 31 LIHIYSKHNLLRESRKLFDEMPE----RNVFSWNTIISACIKSHDLKQARSLFDSSPHKD 86
L+ ++ LL E++++ +M E ++F N +I+ +K + A +F P +D
Sbjct: 33 LLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRD 92
Query: 87 LVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQ 146
++++NS++ Y +G++ A +LF EMQ+A ++ T S L C + G++
Sbjct: 93 VISWNSLISCYAQ-QGFKKKAFQLFEEMQNAG--FIPNKITYISILTACYSPAELENGKK 149
Query: 147 LHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREG 206
+H+ ++K +SL+ MY KC A +VF G +
Sbjct: 150 IHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPR----------------- 192
Query: 207 EMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASAL 266
D VS+NT++ Y Q +E L LF +M G+ ++ T+ + L
Sbjct: 193 ----------------DVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLL 236
Query: 267 SACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSF 326
A + K IH ++ GL S+ V + +V + +C
Sbjct: 237 DAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRC------------------- 277
Query: 327 SISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK-AQNCEALFDLLSEFVTK 385
G+++ A++ F +++VVV+ AL + + N EA +
Sbjct: 278 ------------GDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYR--MRS 323
Query: 386 EGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTY 445
+GV + + +L AC+ AL GK IH++I G D ++ + L+ MY++CG++
Sbjct: 324 DGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPK 383
Query: 446 AEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA--- 502
A +F +RDL+ +N +IA YA +A+ L+++M +G+KP VTF+ +LSA
Sbjct: 384 ARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACAN 443
Query: 503 --------------------------------FRHCGSVEMGEKYFNSMTADYKISPETD 530
+R CGS+ + F A IS
Sbjct: 444 SSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVIS---- 499
Query: 531 HYACMIDLYGRANQLEKAIEFMKSIPTEE---DAVILGSFLNVCR----LNRNAELAGEA 583
+ MI + + E A + + + EE D + S L+ C+ L ++ G
Sbjct: 500 -WNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRI 558
Query: 584 EEKLLRLEGN 593
E L+L+ N
Sbjct: 559 TESGLQLDVN 568
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 141/590 (23%), Positives = 260/590 (44%), Gaps = 85/590 (14%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H Q IKAG N L+ +Y K L +R++F + R+V S+NT++ + +
Sbjct: 151 HSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYV 210
Query: 73 KQARSLFDS------SPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEF 126
K+ LF SP D VTY ++L + + I + +E + D
Sbjct: 211 KECLGLFGQMSSEGISP--DKVTYINLLDAFTTPSMLDEGKR---IHKLTVEEGLNSDIR 265
Query: 127 TVTSTLNLCVKLLNVGFGRQ--------------------------LHAF--MVKTSNDA 158
T+ + +CV+ +V +Q + AF + +D
Sbjct: 266 VGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDG 325
Query: 159 SGFAVSSLIDMYSKCRCYE--EACRVF------EGCTEEVNLISKNAMVAACCREGEMEM 210
++ + + + C + EA ++ +G + +V + NA+++ R G++
Sbjct: 326 VALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQI--GNALISMYARCGDLPK 383
Query: 211 ALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACC 270
A + F+ P+ D +SWN +I+GY + D E ++L+ +M GV+ TF LSAC
Sbjct: 384 ARELFYTMPK-RDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACA 442
Query: 271 GLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISS 330
K IH +L++G+ SN +++ ++++Y +C ++ A+++ R+ S +S
Sbjct: 443 NSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNS 502
Query: 331 MIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVT 390
MI G++ G+ E A + F + QN E +
Sbjct: 503 MIAGHAQHGSYETAYKLFQEM------------------QN--------------EELEP 530
Query: 391 DALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIF 450
D + +L C AL GK+IH I G+Q+D L + L++MY +CG++ A +F
Sbjct: 531 DNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVF 590
Query: 451 QNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVE 510
+ RD++ + MI A G + KAI LF +M +G +P TF +IL ++
Sbjct: 591 HSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLD 650
Query: 511 MGEKYFNS-MTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE 559
G+K + + Y++ +T +I Y ++ + A E +P+ +
Sbjct: 651 EGKKVIAYILNSGYEL--DTGVGNALISAYSKSGSMTDAREVFDKMPSRD 698
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 198/446 (44%), Gaps = 76/446 (17%)
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
T + L C + + +++HA MV+ F + LI+MY KCR +A +VF+
Sbjct: 29 TYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFK-- 86
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
EM + D +SWN+LIS Y Q G ++ +L
Sbjct: 87 ----------------------EMPRR---------DVISWNSLISCYAQQGFKKKAFQL 115
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
F M G N+ T+ S L+AC ++ K+IHS ++K G +P V + ++ +Y K
Sbjct: 116 FEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGK 175
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
C G++ AR+ F ++ ++VV + + Y
Sbjct: 176 C-------------------------------GDLPRARQVFAGISPRDVVSYNTMLGLY 204
Query: 367 VK---AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
+ + C LF +S EG+ D + + LL A + L GK IH + G+
Sbjct: 205 AQKAYVKECLGLFGQMS----SEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGL 260
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
D ++ + LV M +CG++ A+ F+ +RD+V+YN +IA A HGH +A +
Sbjct: 261 NSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYR 320
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRAN 543
M G+ + T+++IL+A ++E G K +S ++ S + +I +Y R
Sbjct: 321 MRSDGVALNRTTYLSILNACSTSKALEAG-KLIHSHISEDGHSSDVQIGNALISMYARCG 379
Query: 544 QLEKAIEFMKSIPTEE----DAVILG 565
L KA E ++P + +A+I G
Sbjct: 380 DLPKARELFYTMPKRDLISWNAIIAG 405
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 147/308 (47%), Gaps = 34/308 (11%)
Query: 261 TFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLK 320
T+ + L C R + AK IH+ +++ + + F+S+ ++++Y KC S+L
Sbjct: 29 TYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCR------SVL--- 79
Query: 321 GVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLS 380
+A + F + ++V+ W +L S Y + + F L
Sbjct: 80 ----------------------DAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFE 117
Query: 381 EFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC 440
E + G + + + + +L AC A L GK+IH+ I++ G Q D ++ ++L+ MY KC
Sbjct: 118 E-MQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKC 176
Query: 441 GNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAIL 500
G++ A +F RD+V YN M+ YA + ++ + LF +M +GI PD VT++ +L
Sbjct: 177 GDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLL 236
Query: 501 SAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEED 560
AF ++ G K + +T + ++ + ++ + R ++ A + K + D
Sbjct: 237 DAFTTPSMLDEG-KRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGT-ADRD 294
Query: 561 AVILGSFL 568
V+ + +
Sbjct: 295 VVVYNALI 302
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 112/235 (47%), Gaps = 11/235 (4%)
Query: 390 TDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEII 449
T+ V LL C + L K IHA ++ V D L + L++MY KC ++ A +
Sbjct: 25 TERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQV 84
Query: 450 FQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSV 509
F+ RD++ +N +I+CYA G ++KA LFEEM G P+ +T+++IL+A +
Sbjct: 85 FKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAEL 144
Query: 510 EMGEKYFNS-MTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAV----IL 564
E G+K + + A Y+ P + ++ +YG+ L +A + I + D V +L
Sbjct: 145 ENGKKIHSQIIKAGYQRDPRVQN--SLLSMYGKCGDLPRARQVFAGI-SPRDVVSYNTML 201
Query: 565 GSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRK 619
G + + L G+ + + +K Y+ L + + E RI K
Sbjct: 202 GLYAQKAYVKECLGLFGQMSSEGI---SPDKVTYINLLDAFTTPSMLDEGKRIHK 253
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 181/653 (27%), Positives = 318/653 (48%), Gaps = 97/653 (14%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
++++ + H A+K GL + N LI +YSK L E
Sbjct: 219 DIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSE--------------------- 257
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
A+ LFD + K++V++NSM+ GY E L +MQ+ D ++ D
Sbjct: 258 ----------AQLLFDKNDKKNIVSWNSMIGGYAREEDV-CRTFYLLQKMQTEDAKMKAD 306
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
EFT+ + L +C++ + ++LH + + ++ ++ I Y++C + RVF+
Sbjct: 307 EFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFD 366
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
M KT SWN L+ GY QN D + L
Sbjct: 367 ------------------------LMDTKT---------VSSWNALLCGYAQNSDPRKAL 393
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
L+++M ++G+ + T S L AC ++++ +EIH + L+NGL +PF+ ++ +Y
Sbjct: 394 DLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLY 453
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
C G A+ FD + +++V W + +
Sbjct: 454 ICC-------------------------------GKPFAAQVLFDGMEHRSLVSWNVMIA 482
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
GY + + +L + ++ +G+ + ++ + GAC+ +AL GKE+H + L+ +
Sbjct: 483 GYSQNGLPDEAINLFRQMLS-DGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLT 541
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
D + S+++DMY+K G + ++ IF E+D+ +NV+IA Y HG ++A+ LFE+M
Sbjct: 542 EDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKM 601
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
L G+KPD TF IL A H G VE G +YFN M + I P+ +HY C++D+ GRA +
Sbjct: 602 LRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGR 661
Query: 545 LEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANV 604
++ A+ ++ +P + D+ I S L+ CR++ N L + KLL LE YV ++N+
Sbjct: 662 IDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNL 721
Query: 605 YAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
+A G W ++ R+R +M+ + + AGCSW+ V ++H F +GD P+ +
Sbjct: 722 FAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEV 774
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 141/539 (26%), Positives = 233/539 (43%), Gaps = 96/539 (17%)
Query: 4 LNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
L+L I H A K L N LI +Y K L+ E+ K+F+ MPERN+ SWN+II
Sbjct: 115 LDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSII 174
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
CG+ + G+ ++ F EM +E
Sbjct: 175 -------------------------------CGF-SENGFLQESFNAFREMLVGEESFVP 202
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
D T+ + L +C ++ G +H VK + +SLIDMYSKCR EA +F
Sbjct: 203 DVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLF 262
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
+ ++ N++S N+M+ RE E +TF+ ++ Q DA+
Sbjct: 263 DK-NDKKNIVSWNSMIGGYARE---EDVCRTFYLLQKM--------------QTEDAK-- 302
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
++ +E T + L C ++ KE+H + ++GL SN V++ +
Sbjct: 303 -----------MKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAA 351
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y +C G + + R FD + K V W AL
Sbjct: 352 YTRC-------------------------------GALCSSERVFDLMDTKTVSSWNALL 380
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
GY + + DL + +T G+ D + LL AC+ +LH G+EIH + LR G+
Sbjct: 381 CGYAQNSDPRKALDLYLQ-MTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGL 439
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
+D + +L+ +Y CG A+++F R LV +NVMIA Y+ +G ++AI LF +
Sbjct: 440 AVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQ 499
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRA 542
ML GI+P + + + A ++ +G K + ++ + + +ID+Y +
Sbjct: 500 MLSDGIQPYEIAIMCVCGACSQLSALRLG-KELHCFALKAHLTEDIFVSSSIIDMYAKG 557
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 111/230 (48%), Gaps = 8/230 (3%)
Query: 324 NSFSISSMIVG-YSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF 382
N F +++ I+ YS+ G+ ++R FD L KN+ W A+ S Y + + E + SE
Sbjct: 32 NDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSEL 91
Query: 383 VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGN 442
++ D L ++ ACA L G+ IH +M + D + + L+ MY KCG
Sbjct: 92 ISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGL 151
Query: 443 MTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML--EKGIKPDAVTFVAIL 500
+ A +F++ ER+LV +N +I ++ +G +++ F EML E+ PD T V +L
Sbjct: 152 VEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVL 211
Query: 501 SAFRHCGSVEMGEK--YFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
C E EK + + ++ E +ID+Y + L +A
Sbjct: 212 PV---CAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEA 258
>gi|108712115|gb|ABF99910.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215767226|dbj|BAG99454.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 684
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 194/592 (32%), Positives = 315/592 (53%), Gaps = 6/592 (1%)
Query: 47 LFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYIN-AEGYEA 105
+F MPERN FSWNTII+ + + +L ARSL P KD V N++L Y+ EA
Sbjct: 94 IFRSMPERNTFSWNTIITGIVSTGNLDMARSLLIEMPVKDPVACNAVLHRYVRRGRADEA 153
Query: 106 DAL-KLFIEMQSADEHIRM-DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV 163
AL + + AD D F + + + C + FGRQ HA MV + +
Sbjct: 154 FALLRTVGQCSGADASSPWNDPFVLATIVGACADWMKYDFGRQAHARMVVSKIEQDLVLS 213
Query: 164 SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELND 223
+L++MY KC + A V G T+ V+ S +A++ G + A++ F R+ E +
Sbjct: 214 CALVNMYCKCGDLDSARYVLNGLTQ-VDEFSLSALIYGYASCGHLHEAIRLFDRKEEPSI 272
Query: 224 AVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHS 283
A+ WN+LISG + LF RM + V + T+AS L+ C V ++IH
Sbjct: 273 AM-WNSLISGCAFACCGNDAFALFARMMRSDVLPDSSTYASILNVCGFSVMVNPGQQIHG 331
Query: 284 WVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEE 343
LK G +++ V+S ++D Y KC A ++ ++SMI YS G +EE
Sbjct: 332 CGLKCGAVNDIIVASALIDFYSKCGLWEDACRAFRELRFHDTIVLNSMITVYSNCGQIEE 391
Query: 344 ARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACA 403
ARR FD +T K+V+ W ++ G + + L E + + G+ D + + L A +
Sbjct: 392 ARRIFDMITGKSVISWNSMVVGLSQNGHARDALGLFCE-MHRLGLRLDKVAIASALSASS 450
Query: 404 LQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNV 463
++ G++I + +G+Q D + S+L+D+Y KCG++ IF+ + D VL+N
Sbjct: 451 SICSISFGEQIFSLATVLGLQSDHVVASSLIDLYCKCGSLANGCRIFEEIDKPDEVLWNS 510
Query: 464 MIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADY 523
M+ +A +G+ +A+ L E M KGIKP TF+A+LSA H G V+ G +F+ M AD+
Sbjct: 511 MLIGHASNGYGHEALELLELMKTKGIKPSERTFIAVLSACCHSGLVKEGLTWFHRMQADF 570
Query: 524 KISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEA 583
+SP +HYAC+ DL RA +LE+++EF++++P E DAV + + C+ N + +
Sbjct: 571 SVSPSAEHYACVTDLLVRAGRLEESVEFIENMPFEADAVSWTTVIGGCKAQGNEAMMRKV 630
Query: 584 EEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWV 635
+KL+ +E ++ + YVQL++ A+ G+W + IR M + + G SW+
Sbjct: 631 AKKLMEMESSHPSLYVQLSSGLASLGDWTKSAEIRSMMYERRITKNPGYSWI 682
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 128/510 (25%), Positives = 221/510 (43%), Gaps = 83/510 (16%)
Query: 135 CVKLL---NVGFGRQLHAFMVKTSNDASGFAVS-SLIDMYSKCRCYEE--ACRVFEGCTE 188
C++LL + G+QLH ++K+ + S S SL+ MY++C + A R+F+
Sbjct: 10 CIQLLRSCSAVAGQQLHQLLLKSGHVPSSLPPSNSLLLMYARCSPLHQHDARRLFDEMPV 69
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISG--------------- 233
+ N S N+++ + + AL F PE N SWNT+I+G
Sbjct: 70 K-NCFSYNSVITSHLNSRDHHAALNIFRSMPERN-TFSWNTIITGIVSTGNLDMARSLLI 127
Query: 234 ----------------YVQNGDAEEGLKLFVRMGE-----NGVRWNEH-TFASALSACCG 271
YV+ G A+E L +G+ WN+ A+ + AC
Sbjct: 128 EMPVKDPVACNAVLHRYVRRGRADEAFALLRTVGQCSGADASSPWNDPFVLATIVGACAD 187
Query: 272 LRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSM 331
++ H+ ++ + + + +S +V++YCKC +++ A +L + FS+S++
Sbjct: 188 WMKYDFGRQAHARMVVSKIEQDLVLSCALVNMYCKCGDLDSARYVLNGLTQVDEFSLSAL 247
Query: 332 IVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTD 391
I GY+ G++ EA R FD E ++ +W +L SG A F L + + + V+ D
Sbjct: 248 IYGYASCGHLHEAIRLFDRKEEPSIAMWNSLISGCAFACCGNDAFALFARMM-RSDVLPD 306
Query: 392 ALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK------------ 439
+ +L C ++PG++IH L+ G D + S L+D YSK
Sbjct: 307 SSTYASILNVCGFSVMVNPGQQIHGCGLKCGAVNDIIVASALIDFYSKCGLWEDACRAFR 366
Query: 440 -------------------CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
CG + A IF + ++ +N M+ + +GH A+ L
Sbjct: 367 ELRFHDTIVLNSMITVYSNCGQIEEARRIFDMITGKSVISWNSMVVGLSQNGHARDALGL 426
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY--ACMIDL 538
F EM G++ D V + LSA S+ GE+ F+ T + ++DH + +IDL
Sbjct: 427 FCEMHRLGLRLDKVAIASALSASSSICSISFGEQIFSLATV---LGLQSDHVVASSLIDL 483
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFL 568
Y + L + I + D V+ S L
Sbjct: 484 YCKCGSLANGCRIFEEI-DKPDEVLWNSML 512
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 113/476 (23%), Positives = 202/476 (42%), Gaps = 39/476 (8%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + + + + + + L+++Y K L +R + + + + + FS + +I L
Sbjct: 198 HARMVVSKIEQDLVLSCALVNMYCKCGDLDSARYVLNGLTQVDEFSLSALIYGYASCGHL 257
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+A LFD + +NS++ G A DA LF M +D + D T S L
Sbjct: 258 HEAIRLFDRKEEPSIAMWNSLISGCAFA-CCGNDAFALFARMMRSD--VLPDSSTYASIL 314
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
N+C + V G+Q+H +K S+LID YSKC +E+ACR F +
Sbjct: 315 NVCGFSVMVNPGQQIHGCGLKCGAVNDIIVASALIDFYSKCGLWEDACRAFRELRFH-DT 373
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
I N+M+ G++E A + F +SWN+++ G QNG A + L LF M
Sbjct: 374 IVLNSMITVYSNCGQIEEARRIF-DMITGKSVISWNSMVVGLSQNGHARDALGLFCEMHR 432
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G+R ++ ASALSA + ++ ++I S GL S+ V+S ++D+YCKC
Sbjct: 433 LGLRLDKVAIASALSASSSICSISFGEQIFSLATVLGLQSDHVVASSLIDLYCKC----- 487
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G++ R F+ + + + V+W ++ G+
Sbjct: 488 --------------------------GSLANGCRIFEEIDKPDEVLWNSMLIGHASNGYG 521
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG-KEIHAYILRMGVQMDKKLIS 431
+LL E + +G+ + +L AC + G H V + +
Sbjct: 522 HEALELL-ELMKTKGIKPSERTFIAVLSACCHSGLVKEGLTWFHRMQADFSVSPSAEHYA 580
Query: 432 TLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
+ D+ + G + + +N E D V + +I G+E + ++++E
Sbjct: 581 CVTDLLVRAGRLEESVEFIENMPFEADAVSWTTVIGGCKAQGNEAMMRKVAKKLME 636
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 179/620 (28%), Positives = 308/620 (49%), Gaps = 68/620 (10%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
+ N+F + ++ K + AR +FD P +D V +N+M+ G + Y+ D++++F
Sbjct: 135 DSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYD-DSVQVFK 193
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
+M + + +R+D TV + L ++ V G + +K + ++ LI ++SK
Sbjct: 194 DMVA--QGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSK 251
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C + A +F M+ R+P+L VS+N LIS
Sbjct: 252 CEDVDTARLLF-------------GMI-----------------RKPDL---VSYNALIS 278
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
G+ NG+ E +K F + +G R + T + ++ A I + +K+G I
Sbjct: 279 GFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTIL 338
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
P VS+ + +Y + ++ A R+ FD +
Sbjct: 339 QPSVSTALTTIYSRLNEIDLA-------------------------------RQLFDESS 367
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
EK V W A+ SGY ++ E L E +T E + + + +L ACA AL GK
Sbjct: 368 EKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTE-FTPNPVTITSILSACAQLGALSFGK 426
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
+H I ++ + + + L+DMY+KCGN++ A +F E++ V +N MI Y HG
Sbjct: 427 SVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHG 486
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
+ ++A+ LF EML G +P +VTF+++L A H G V G++ F++M Y+I P +HY
Sbjct: 487 YGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHY 546
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
ACM+D+ GRA QLEKA+EF++ +P E + G+ L C ++++ LA A E+L L+
Sbjct: 547 ACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASERLFELDP 606
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
N YV L+N+Y+ E N+ + +R+ ++ ++ GC+ + V H+F GD SH
Sbjct: 607 GNVGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLIEVNGTPHVFVCGDRSHS 666
Query: 653 KTNAIYSVLAIFTGELYEIA 672
+T +IY+ L TG++ E+
Sbjct: 667 QTTSIYAKLEELTGKMREMG 686
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 117/492 (23%), Positives = 205/492 (41%), Gaps = 77/492 (15%)
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKL-FIEMQSADEHIRMDEFTVTST 131
+ AR+LF S P D+ +N ++ G+ + DA + F + + D FT
Sbjct: 57 RHARALFFSVPKPDIFLFNVLIKGF----SFSPDASSISFYTHLLKNTTLSPDNFTYAFA 112
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
++ + G LHA V D++ F S+L+D+Y
Sbjct: 113 ISASP---DDNLGMCLHAHAVVDGFDSNLFVASALVDLY--------------------- 148
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
C+ + A K F + P+ D V WNT+I+G V+N ++ +++F M
Sbjct: 149 -----------CKFSRVAYARKVFDKMPD-RDTVLWNTMITGLVRNCCYDDSVQVFKDMV 196
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
GVR + T A+ L A ++ VK I LK G + +V +G++ V+ KCE+++
Sbjct: 197 AQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVD 256
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY-VKAQ 370
A + + + S +++I G+S G E A ++F L L SG V +
Sbjct: 257 TARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFREL----------LVSGQRVSSS 306
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
L + S F LH I + ++ G + +
Sbjct: 307 TMVGLIPVSSPF-----------------------GHLHLACCIQGFCVKSGTILQPSVS 343
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+ L +YS+ + A +F E+ + +N MI+ YA G E AI LF+EM+
Sbjct: 344 TALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFT 403
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
P+ VT +ILSA G++ G K + + + +ID+Y + + +A +
Sbjct: 404 PNPVTITSILSACAQLGALSFG-KSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQ 462
Query: 551 FMKSIPTEEDAV 562
+ +E++ V
Sbjct: 463 LF-DLTSEKNTV 473
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 121/281 (43%), Gaps = 70/281 (24%)
Query: 10 LICHVQA--IKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACI 67
L C +Q +K+G L + L IYS+ N + +R+LFDE E+ V +WN +IS
Sbjct: 323 LACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMIS--- 379
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFT 127
GY + G A+ LF EM + + + T
Sbjct: 380 ----------------------------GYAQS-GLTEMAISLFQEMMTTE--FTPNPVT 408
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
+TS L+ C +L + FG+ +H + + + + + ++LIDMY+KC EA ++F+ +
Sbjct: 409 ITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTS 468
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
E+ + V+WNT+I GY +G +E LKLF
Sbjct: 469 EK---------------------------------NTVTWNTMIFGYGLHGYGDEALKLF 495
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEI-HSWVLK 287
M G + + TF S L AC V+ EI H+ V K
Sbjct: 496 NEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNK 536
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 79/174 (45%), Gaps = 4/174 (2%)
Query: 339 GNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVIL 398
G AR F S+ + ++ ++ L G+ + + ++ + + + D
Sbjct: 54 GATRHARALFFSVPKPDIFLFNVLIKGFSFSPDASSI-SFYTHLLKNTTLSPDNFTYAFA 112
Query: 399 LGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDL 458
+ A + G +HA+ + G + + S LVD+Y K + YA +F +RD
Sbjct: 113 ISASPDD---NLGMCLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDT 169
Query: 459 VLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMG 512
VL+N MI + + ++ +F++M+ +G++ D+ T +L A V++G
Sbjct: 170 VLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVG 223
>gi|297734691|emb|CBI16742.3| unnamed protein product [Vitis vinifera]
Length = 674
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 189/624 (30%), Positives = 322/624 (51%), Gaps = 61/624 (9%)
Query: 41 LRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINA 100
+R +RKLFDEMP + S+ +I+A +K+++L++A LF + P + +V ++M+ GY A
Sbjct: 85 VRGARKLFDEMPHHDNVSYTAMITAYLKNNELRKAEKLFQTMPDRTIVAESAMIDGYAKA 144
Query: 101 EGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASG 160
G A K+F M D +
Sbjct: 145 -GLMDSAQKVFDAMI-----------------------------------------DTNV 162
Query: 161 FAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPE 220
F+ +SLI Y + +AC++F+ + N++S MV R G ++ A F + PE
Sbjct: 163 FSWTSLISGYFRDGQVAKACQLFDQMPAK-NVVSWTTMVLGYARNGLIDQARSVFNQMPE 221
Query: 221 LNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACC-GLRNVKCAK 279
N +SW ++ YV NG +E LKLF M + N +++ + +S C G R + K
Sbjct: 222 KN-TISWTAMMKSYVDNGRTDEALKLFHEMPQR----NLYSWNTMISGCLDGKRVNEAFK 276
Query: 280 EIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQG 339
H L+N + VS + + K Y + M ++ + ++MI Y +
Sbjct: 277 LFHLMPLRNAVSWTIMVSGLARNGFTKLAR-EYFDQM----PNKDIAAWNAMITAYVDEC 331
Query: 340 NMEEARRHFDSLTEKNVVVWTALFSGYVKAQ-NCEALFDLLSEFVTKEGVVTDALILVIL 398
+ EA F+ +TE+N+V W A+ GY + + + EA+ L+ + + + + + I+
Sbjct: 332 LIVEASELFNLMTERNIVTWNAMIDGYARHRPDGEAMKHLI--LMLRSCIRPNETTMTII 389
Query: 399 LGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDL 458
L +C L + HA + +G + + L + L+ MYS+ G+++ + I F++ +D+
Sbjct: 390 LTSCWGMLEL---MQAHALAIVVGCECETSLSNALITMYSRIGDISSSRIAFESLKAKDV 446
Query: 459 VLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNS 518
V + M+ + +HGH + A+ +F ML+ G KPD +TFV +LSA H G V+ G+K F+S
Sbjct: 447 VSWTAMLLAFTYHGHGDHALHVFGHMLKSGTKPDEITFVGVLSACSHAGLVKKGQKLFDS 506
Query: 519 MTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPT-EEDAVILGSFLNVCRLNRNA 577
M+ Y + P +HY+C++D+ GRA Q+ +A++ + +P E D +LG+ L CRL+ N
Sbjct: 507 MSRAYGLEPRAEHYSCLVDILGRAGQVHEAMDVVWKMPECERDGAVLGALLGACRLHGNV 566
Query: 578 ELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYV 637
E+A +KL+ L+ N+ YV LANV+AA GNW E +RK+M+ + G S + V
Sbjct: 567 EMADYIGQKLIELQPNSSGGYVLLANVFAARGNWDEFAEVRKKMKDRNVRKVPGFSQIEV 626
Query: 638 EHEIHIFTVGDVSHPKTNAIYSVL 661
+ + H F GD SHP+ IY +L
Sbjct: 627 KGKCHAFFAGDKSHPQVEEIYELL 650
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 113/506 (22%), Positives = 210/506 (41%), Gaps = 88/506 (17%)
Query: 24 TTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP 83
T + + +I Y+K L+ ++K+FD M + NVFSW ++IS + + +A LFD P
Sbjct: 130 TIVAESAMIDGYAKAGLMDSAQKVFDAMIDTNVFSWTSLISGYFRDGQVAKACQLFDQMP 189
Query: 84 HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE---HIRMDEFTVTSTLNLCVKLLN 140
K++V++ +M+ GY G A +F +M + M + + +KL +
Sbjct: 190 AKNVVSWTTMVLGYAR-NGLIDQARSVFNQMPEKNTISWTAMMKSYVDNGRTDEALKLFH 248
Query: 141 VGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVA 200
R L+++ S G V+ EA ++F N +S MV+
Sbjct: 249 EMPQRNLYSWNTMISGCLDGKRVN-------------EAFKLFH-LMPLRNAVSWTIMVS 294
Query: 201 ACCREGEMEMALKTFWRQPELNDA------------------------------VSWNTL 230
R G ++A + F + P + A V+WN +
Sbjct: 295 GLARNGFTKLAREYFDQMPNKDIAAWNAMITAYVDECLIVEASELFNLMTERNIVTWNAM 354
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL 290
I GY ++ E +K + M + +R NE T L++C G+ + A +
Sbjct: 355 IDGYARHRPDGEAMKHLILMLRSCIRPNETTMTIILTSCWGMLELMQAHAL--------- 405
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
+ V C+CE S S +++I YS G++ +R F+S
Sbjct: 406 ---------AIVVGCECE---------------TSLS-NALITMYSRIGDISSSRIAFES 440
Query: 351 LTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHP 410
L K+VV WTA+ + + + + + K G D + V +L AC+ +
Sbjct: 441 LKAKDVVSWTAMLLAFTYHGHGDHALHVFGHML-KSGTKPDEITFVGVLSACSHAGLVKK 499
Query: 411 GKEIHAYILRM-GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFI--ERDLVLYNVMIAC 467
G+++ + R G++ + S LVD+ + G + A + ERD + ++
Sbjct: 500 GQKLFDSMSRAYGLEPRAEHYSCLVDILGRAGQVHEAMDVVWKMPECERDGAVLGALLGA 559
Query: 468 YAHHGHEEKAILLFEEMLEKGIKPDA 493
HG+ E A + ++++E ++P++
Sbjct: 560 CRLHGNVEMADYIGQKLIE--LQPNS 583
>gi|357132191|ref|XP_003567715.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Brachypodium distachyon]
Length = 656
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 190/632 (30%), Positives = 320/632 (50%), Gaps = 15/632 (2%)
Query: 13 HVQAIKAGLTLTTI-TTNQLIHIYSK---HNLLRESRKLFDEMPE--RNVFSWNTIISAC 66
H A K+GL ++ + N L+ YS+ + + LFDE+P R+ + NT+++A
Sbjct: 29 HALAAKSGLLVSNLFVRNSLLAFYSRLPSSHAPALAHHLFDEIPLALRDAAAHNTLLAAL 88
Query: 67 IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEF 126
+ L A+ + P +D V++ ++L A G+ DA+ +F M + D + +E
Sbjct: 89 ARGGHLDHAKRMLAEMPQRDTVSFTTVLTALARA-GHAEDAMAVFRGMLAQD--VPPNEV 145
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
T+ + + +H V+ D ++L+ Y+ A VFE
Sbjct: 146 TLAGVITALARDWAPAPLGMVHGVSVQRGLDGFVIVATNLVHAYAAAAQVGFARAVFEWM 205
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
++ N ++ NAM+ + G ++MA + F R PE D VSW +I GY++ E L+
Sbjct: 206 PDK-NTVTWNAMLNGYVKAGAIDMAAEMFERIPE-RDVVSWLVMIDGYIRADCISEALRT 263
Query: 247 FVRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
+V M E R N AC V +++H+ +LK+G ++ FV + ++ Y
Sbjct: 264 YVAMMAEVDTRGNVALLVDFQKACARHAAVLEGQQLHTVILKDGFDTHLFVQATLIHFYG 323
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
C+ ++ A+ L + S ++ + G + M EAR+ FD++ EK+ + W+ L SG
Sbjct: 324 SCDLLDLAKMQFKLSDKSHIASWNAFMAGIVRKNLMHEARQLFDNMPEKDTISWSTLLSG 383
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
YV++ + + L + GV + + L L A A L G+ IH YI+ + +
Sbjct: 384 YVQSGHSDMALQLFC-LMLGAGVKPNHITLASTLSAVANSGTLEQGRWIHDYIISKSIHL 442
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFIER--DLVLYNVMIACYAHHGHEEKAILLFEE 483
LI+ L+DMY+KCG++ A ++F + E+ L +N MI A HGH ++ LF +
Sbjct: 443 TDNLIAGLIDMYAKCGSVADAVLLFNHVKEKLSSLSPWNAMICSLAIHGHAHMSLELFSQ 502
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRAN 543
+ IKP+++T++ +L+A H G V G+ +F SM +Y I P HY CM+DL GRA
Sbjct: 503 LQSSNIKPNSITYIGVLNACCHAGMVTEGKHHFESMRREYGIPPTIKHYGCMVDLLGRAG 562
Query: 544 QLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLAN 603
LE+A +K++P + D VI GS L R + N L +A E+L +L+ N+ A V L N
Sbjct: 563 YLEEAERLIKTMPVKSDVVIWGSILAAARSHGNVALGEKAAEELAKLDPNHGASKVALCN 622
Query: 604 VYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWV 635
+YA G W + +RK++R R +G S V
Sbjct: 623 IYADAGRWNNVSVVRKELRYENLERLSGSSGV 654
>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Glycine max]
Length = 882
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 194/619 (31%), Positives = 303/619 (48%), Gaps = 72/619 (11%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
E +V N +I+ +K D+ AR +FD P++D +++N+M+ GY G + L+LF
Sbjct: 239 ESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFE-NGVCLEGLRLFG 297
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
M + D T+TS + C L + GRQ+H ++++T +SLI MYS
Sbjct: 298 MMIKYP--VDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSS 355
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
EEA VF + E D VSW +IS
Sbjct: 356 VGLIEEAETVFS---------------------------------RTECRDLVSWTAMIS 382
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
GY ++ L+ + M G+ +E T A LSAC L N+ +H + GL+S
Sbjct: 383 GYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVS 442
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
V++ ++D+Y KC+ ++ A + F S
Sbjct: 443 YSIVANSLIDMYAKCKCIDKALEI-------------------------------FHSTL 471
Query: 353 EKNVVVWTALFSGYVKAQNC-EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG 411
EKN+V WT++ G C EALF E + + + +++ LV +L ACA AL G
Sbjct: 472 EKNIVSWTSIILGLRINNRCFEALF-FFREMIRR--LKPNSVTLVCVLSACARIGALTCG 528
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
KEIHA+ LR GV D + + ++DMY +CG M YA F + ++ ++ +N+++ YA
Sbjct: 529 KEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQFFS-VDHEVTSWNILLTGYAER 587
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH 531
G A LF+ M+E + P+ VTF++IL A G V G +YFNSM Y I P H
Sbjct: 588 GKGAHATELFQRMVESNVSPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKH 647
Query: 532 YACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLE 591
YAC++DL GR+ +LE+A EF++ +P + D + G+ LN CR++ + EL A E + + +
Sbjct: 648 YACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLNSCRIHHHVELGELAAENIFQDD 707
Query: 592 GNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSH 651
+ Y+ L+N+YA G W ++ +RK MR GCSWV V+ +H F D H
Sbjct: 708 TTSVGYYILLSNLYADNGKWDKVAEVRKMMRQNGLIVDPGCSWVEVKGTVHAFLSSDNFH 767
Query: 652 PKTNAIYSVLAIFTGELYE 670
P+ I ++L F ++ E
Sbjct: 768 PQIKEINALLERFYKKMKE 786
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 108/265 (40%), Gaps = 69/265 (26%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
NL + H A + GL +I N LI +Y+K + ++ ++F E+N+ SW +II
Sbjct: 424 NLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSII- 482
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
L IN +E AL F EM ++ +
Sbjct: 483 -----------------------------LGLRINNRCFE--ALFFFREMI---RRLKPN 508
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
T+ L+ C ++ + G+++HA ++T GF ++++DMY +C
Sbjct: 509 SVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRC----------- 557
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
G ME A K F+ ++ SWN L++GY + G
Sbjct: 558 ---------------------GRMEYAWKQFFSVD--HEVTSWNILLTGYAERGKGAHAT 594
Query: 245 KLFVRMGENGVRWNEHTFASALSAC 269
+LF RM E+ V NE TF S L AC
Sbjct: 595 ELFQRMVESNVSPNEVTFISILCAC 619
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 12/191 (6%)
Query: 388 VVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAE 447
V DA + +I L C + A G +++Y+ + +L + L+ M+ + GN+ A
Sbjct: 104 VEDDAYVALIRL--CEWKRARKEGSRVYSYVSISMSHLSLQLGNALLSMFVRFGNLVDAW 161
Query: 448 IIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCG 507
+F +R+L +NV++ YA G ++A+ L+ ML G+KPD TF +L R CG
Sbjct: 162 YVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVL---RTCG 218
Query: 508 SVE--MGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE----DA 561
+ + + + Y + D +I +Y + + A +P + +A
Sbjct: 219 GMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNA 278
Query: 562 VILGSFLN-VC 571
+I G F N VC
Sbjct: 279 MISGYFENGVC 289
>gi|414886077|tpg|DAA62091.1| TPA: methyltransferase small domain protein [Zea mays]
Length = 656
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 193/635 (30%), Positives = 323/635 (50%), Gaps = 21/635 (3%)
Query: 13 HVQAIKAGLTLTTI-TTNQLIHIYSK-HNLLRESRKLFDEMPE--RNVFSWNTIISACIK 68
H A K+GL + + N ++ YS+ + L + +LFDE P R+ + N++++A +
Sbjct: 29 HALAAKSGLLASNVFVRNSVLSSYSRLPSSLASALQLFDETPPPLRDATARNSVLAALTR 88
Query: 69 SHDLKQARSLFDSSP--HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEF 126
+ L +A+ L + P H+D V+Y +++ + A G+ A A+ +F M S E++ +E
Sbjct: 89 AGYLDRAQGLLEEMPRIHRDAVSYTTLVTSFARA-GHAARAVAVFRSMLS--ENVVPNEA 145
Query: 127 TVTSTLNL---CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
T+ + C VG +H F ++ + D ++L+ Y+ A +F
Sbjct: 146 TLAGAITAFARCGAPATVGM---IHGFALQRALDGFVIVATNLVHAYAGVLELCSARALF 202
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
+G T N ++ N M+ + ++MA + FWR PE D VSW TLI GY+ +
Sbjct: 203 DGMTYR-NTVTWNVMLNGYVKAKMIDMAAEVFWRIPE-RDEVSWLTLIDGYICADLISDA 260
Query: 244 LKLFVRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
+K +V+M GE G E + AC V +++H+ +LKNG ++ FV + +V
Sbjct: 261 MKAYVQMVGEVGANDYEVLLVDLMKACARYSAVTEGQQLHTVILKNGFDAHAFVQATLVH 320
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
Y C + A+ L ++ S ++++ G + EAR FD + E++ V W+ +
Sbjct: 321 FYGCCGLIGLAQMTFRLSDKSHTASWNALLAALLRNGLIREARELFDDMPERDTVSWSTM 380
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
SGYV+ + L + + + + L L A A L GK IH YI+
Sbjct: 381 ISGYVQTGRSDMALKLFYSMLNTS-IEPNEVTLASALSAIADSGTLDQGKWIHDYIMNRP 439
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER--DLVLYNVMIACYAHHGHEEKAILL 480
VQ+ L S L+DMY+KCG++ A F ++ + +N MI A HG+ ++ L
Sbjct: 440 VQLTDNLSSGLIDMYAKCGSIADAVQFFNRVNDKFSSVSPWNAMICSLAIHGYAHMSLDL 499
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
F ++ IKP+++TF+ +LSA H G+V G+ YF SMT +Y I P HY CM+DL G
Sbjct: 500 FSQLQRTSIKPNSITFIGVLSACCHAGTVTKGKYYFESMTREYGIQPTIKHYGCMVDLLG 559
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQ 600
RA LE+A + + +P + D VI GS L+ R N L A E+L +L+ + A +
Sbjct: 560 RAGYLEEAEQLVSMMPMKPDVVIWGSILSASRAQGNVALGERAAEELAKLDQTHGASKIA 619
Query: 601 LANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWV 635
L+N+YA G+W + +RK+++ R G S +
Sbjct: 620 LSNIYADAGHWINVSVVRKELQDANLERLTGRSGI 654
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 46/236 (19%), Positives = 108/236 (45%), Gaps = 13/236 (5%)
Query: 275 VKCAKEIHSWVLKNGLI-SNPFVSSGIVDVYCKCENMNYAESMLLL----KGVRNSFSIS 329
++C +++H+ K+GL+ SN FV + ++ Y + + + A ++ L +R++ + +
Sbjct: 22 LRCGEQLHALAAKSGLLASNVFVRNSVLSSYSRLPS-SLASALQLFDETPPPLRDATARN 80
Query: 330 SMIVGYSLQGNMEEARRHFDSLTE--KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEG 387
S++ + G ++ A+ + + ++ V +T L + + +A + + ++ E
Sbjct: 81 SVLAALTRAGYLDRAQGLLEEMPRIHRDAVSYTTLVTSFARAGHAARAVAVFRSMLS-EN 139
Query: 388 VVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAE 447
VV + L + A A A IH + L+ + + + LV Y+ + A
Sbjct: 140 VVPNEATLAGAITAFARCGAPATVGMIHGFALQRALDGFVIVATNLVHAYAGVLELCSAR 199
Query: 448 IIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAF 503
+F R+ V +NVM+ Y + A +F + E+ D V+++ ++ +
Sbjct: 200 ALFDGMTYRNTVTWNVMLNGYVKAKMIDMAAEVFWRIPER----DEVSWLTLIDGY 251
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 177/532 (33%), Positives = 277/532 (52%), Gaps = 67/532 (12%)
Query: 130 STLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEE 189
S L C+ + G+++HA M+KT + + + LI +Y+KCRC +A RV +
Sbjct: 15 SVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLD----- 69
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
EM PE N VSW +ISGY Q G A E L LFV
Sbjct: 70 -------------------EM--------PERN-VVSWTAMISGYSQRGYASEALHLFVE 101
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
M +G NE TFA+ L++C + ++IHS V+K S+ FV S ++D+Y K
Sbjct: 102 MLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKA-- 159
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
G + EARR FD L E++VV TA+ SGY +
Sbjct: 160 -----------------------------GKICEARRVFDGLPERDVVSCTAIISGYAQL 190
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
E DL + +EG+ ++ + +L A + AAL G+++H+++LR + L
Sbjct: 191 GLDEEALDLFRR-LQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVL 249
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG- 488
++L+DMYSKCG++TY+ IF + ER ++ +N M+ Y+ HG +A+ LF+ M E+
Sbjct: 250 QNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENK 309
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYK-ISPETDHYACMIDLYGRANQLEK 547
+KPD+VTF+A+LS H G + G + F M PE +HY C++DL+GRA ++E+
Sbjct: 310 VKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEE 369
Query: 548 AIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAA 607
A EF+K +P E A I GS L CR+++N + +LL +E N YV L+N+YA+
Sbjct: 370 AFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYAS 429
Query: 608 EGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYS 659
G W ++ +R+ M+ + G SW+ ++ +H F D SHP+ +++
Sbjct: 430 AGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFA 481
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 128/481 (26%), Positives = 209/481 (43%), Gaps = 92/481 (19%)
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
L AR + D P +++V++ +M+ GY + GY ++AL LF+EM + +EFT +
Sbjct: 61 LGDARRVLDEMPERNVVSWTAMISGY-SQRGYASEALHLFVEMLMSG--TAPNEFTFATV 117
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L C GRQ+H+ ++KTS ++ F SSL+DMY+K EA RVF+G E
Sbjct: 118 LTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPE--- 174
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
D VS +ISGY Q G EE L LF R+
Sbjct: 175 ------------------------------RDVVSCTAIISGYAQLGLDEEALDLFRRLQ 204
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
G+R N T+AS L+A GL + +++HS VL+ L + + ++D+Y KC ++
Sbjct: 205 REGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLT 264
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVV---------VWTAL 362
Y+ + R S ++M+VGYS G EA F + E+N V V +
Sbjct: 265 YSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGC 324
Query: 363 FSGYVKAQNCEALFDLLS-----------------------------EFVTKEGVVTDAL 393
G ++ + E +++++ EF+ K A
Sbjct: 325 SHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAA 384
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGN----MTYAEII 449
I LLGAC + +H G+ + +L + + + L ++Y+ G T E++
Sbjct: 385 IWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYV-ILSNLYASAGRWDDVRTVRELM 443
Query: 450 FQ---------NFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAIL 500
+ ++IE D L+ + +H EE +F ++ E IK +V L
Sbjct: 444 KEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEE----VFAKVRELSIKIKEAGYVPEL 499
Query: 501 S 501
S
Sbjct: 500 S 500
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 130/319 (40%), Gaps = 78/319 (24%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNV--------- 56
++E H IK +LI +Y+K L ++R++ DEMPERNV
Sbjct: 26 IREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISG 85
Query: 57 --------------------------FSWNTIISACIKSHDLK----------------- 73
F++ T++++C S +
Sbjct: 86 YSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESH 145
Query: 74 ------------------QARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQ 115
+AR +FD P +D+V+ +++ GY G + +AL LF +Q
Sbjct: 146 IFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQL-GLDEEALDLFRRLQ 204
Query: 116 SADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRC 175
E +R + T S L L + GRQ+H+ +++ +SLIDMYSKC
Sbjct: 205 R--EGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGS 262
Query: 176 YEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN----DAVSWNTLI 231
+ R+F+ E +IS NAM+ + G A++ F E N D+V++ ++
Sbjct: 263 LTYSRRIFDSMPER-TVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVL 321
Query: 232 SGYVQNGDAEEGLKLFVRM 250
SG G + GL++F M
Sbjct: 322 SGCSHGGMEDRGLEIFYEM 340
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 201/627 (32%), Positives = 307/627 (48%), Gaps = 78/627 (12%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHI--YSKHNLLRESRKLFDEMPERNVFSWNTI 62
NLK+ H Q IK GL T ++LI S L + LF+ + + N F WNT+
Sbjct: 47 NLKQ---IHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTM 103
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSML-CGYINAEGYEADALKLFIEMQSADEHI 121
I + SL SSP + Y ML CG +
Sbjct: 104 I----------RGNSL-SSSPVGAIDFYVRMLLCG------------------------V 128
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+ +T L C K+ G+Q+H ++K ++ F +SLI+MY++ A
Sbjct: 129 EPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAEL 188
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
VF + + +S A++ G ++ A + F P + DAVSWN +I+GY Q+G E
Sbjct: 189 VFSKSSLR-DAVSFTALITGYTLRGCLDDARRLFEEIP-VRDAVSWNAMIAGYAQSGRFE 246
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E L F M V NE T + LSAC +++ + SW+ +GL SN + + ++
Sbjct: 247 EALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALI 306
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D+Y KC G++++AR F+ + EK+++ W
Sbjct: 307 DMYSKC-------------------------------GDLDKARDLFEGICEKDIISWNV 335
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+ GY + + L + + + V + + V +L ACA AL GK IHAYI +
Sbjct: 336 MIGGYSHMNSYKEALALFRK-MQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKK 394
Query: 422 GVQM-DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
+ + + L ++L+DMY+KCGN+ A+ +F + L +N MI+ A HGH A+ L
Sbjct: 395 FLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALEL 454
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
F +M ++G +PD +TFV +LSA H G VE+G + F+SM DY ISP+ HY CMIDL G
Sbjct: 455 FRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLG 514
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQ 600
RA ++A MK++ + D I GS L CR++ N EL A + L LE N YV
Sbjct: 515 RAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVL 574
Query: 601 LANVYAAEGNWAEMGRIRKQM--RGMK 625
L+N+YA G W ++ RIR ++ +GMK
Sbjct: 575 LSNIYATAGRWDDVARIRTKLNDKGMK 601
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 146/334 (43%), Gaps = 66/334 (19%)
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLL 319
H + LS C +N+K +IHS ++K GL + F S +++ +C
Sbjct: 33 HPSLTLLSTCKSFQNLK---QIHSQIIKTGLHNTQFALSKLIE-FC-------------- 74
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLL 379
+IS GN+ A F+S+ + N +W + G + + D
Sbjct: 75 -------AISPF-------GNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFY 120
Query: 380 SEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
+ GV ++ LL +CA A GK+IH ++L++G++ D + ++L++MY++
Sbjct: 121 VRMLLC-GVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQ 179
Query: 440 CGNMTYAEII-------------------------------FQNFIERDLVLYNVMIACY 468
G + YAE++ F+ RD V +N MIA Y
Sbjct: 180 NGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGY 239
Query: 469 AHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE 528
A G E+A+ F+EM + P+ T V +LSA GS+E+G + S D+ +
Sbjct: 240 AQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELG-NWVRSWIEDHGLGSN 298
Query: 529 TDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAV 562
+ID+Y + L+KA + + I E+D +
Sbjct: 299 LRLVNALIDMYSKCGDLDKARDLFEGI-CEKDII 331
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 182/596 (30%), Positives = 296/596 (49%), Gaps = 67/596 (11%)
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I A D+ AR +FD P + +N+++ GY ++ DAL ++ +MQ A +
Sbjct: 59 LIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRNNHFQ-DALLMYSKMQLA--RV 115
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
D FT L C L ++ GR +HA + + +A F + LI +Y+KCR A
Sbjct: 116 SPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCART 175
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
VFEG + + +T VSW ++S Y QNG+
Sbjct: 176 VFEG----------------------LPLPERTI---------VSWTAIVSAYAQNGEPV 204
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E L++F +M + V+ + S L+A L++++ + IH+ V+K GL + P + +
Sbjct: 205 EALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLN 264
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
+Y KC G + A+ FD + N+++W A
Sbjct: 265 TMYAKC-------------------------------GQVATAKILFDKMKSPNLILWNA 293
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+ SGY K + DL E + K+ V D + + + ACA +L + + Y+ R
Sbjct: 294 MISGYAKNGFAKDAIDLFHEMINKD-VRPDTISITSAISACAQVGSLEQARWMDEYVSRS 352
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
+ D + S L+DM++KCG++ A +F ++RD+V+++ MI Y HG +AI L+
Sbjct: 353 DYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLY 412
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGR 541
M G+ P+ VTF+ +L A H G V G +FN M AD+KI+P+ HYAC+IDL GR
Sbjct: 413 RAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRM-ADHKINPQQQHYACIIDLLGR 471
Query: 542 ANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQL 601
A L++A E +K +P + + G+ L+ C+ +R+ EL A ++L ++ +N YVQL
Sbjct: 472 AGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKYAAQQLFSIDPSNTGHYVQL 531
Query: 602 ANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
+N+YAA W + +R +M+ N+ GCSWV V + F VGD SHP+ I
Sbjct: 532 SNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEGFRVGDKSHPRYEEI 587
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 178/359 (49%), Gaps = 38/359 (10%)
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
LI+K ++ A G++ A + F P WN +I GY +N ++ L ++ +M
Sbjct: 55 LITK--LIHASSSYGDITFARQVFDDLPR-PQVFPWNAIIRGYSRNNHFQDALLMYSKMQ 111
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
V + TF L AC GL +++ + +H+ V + G ++ FV +G++ +Y KC +
Sbjct: 112 LARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLG 171
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
A + + +G+ L E+ +V WTA+ S Y AQN
Sbjct: 172 CART--VFEGL---------------------------PLPERTIVSWTAIVSAY--AQN 200
Query: 372 CEAL--FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
E + ++ S+ + K V D + LV +L A L G+ IHA +++MG++ + L
Sbjct: 201 GEPVEALEIFSQ-MRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDL 259
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+ +L MY+KCG + A+I+F +L+L+N MI+ YA +G + AI LF EM+ K +
Sbjct: 260 LISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDV 319
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
+PD ++ + +SA GS+E ++ + + + + +ID++ + +E A
Sbjct: 320 RPDTISITSAISACAQVGSLEQA-RWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECA 377
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 156/369 (42%), Gaps = 69/369 (18%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFD--EMPERNVFSWNTI 62
+L+ H Q + G N LI +Y+K L +R +F+ +PER + SW I
Sbjct: 134 HLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAI 193
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
+SA ++ G +AL++F +M+ D ++
Sbjct: 194 VSAYAQN--------------------------------GEPVEALEIFSQMRKMD--VK 219
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
D + S LN L ++ GR +HA ++K + + SL MY+KC A +
Sbjct: 220 PDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKIL 279
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
F+ + NLI NAM ISGY +NG A++
Sbjct: 280 FDK-MKSPNLILWNAM--------------------------------ISGYAKNGFAKD 306
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
+ LF M VR + + SA+SAC + +++ A+ + +V ++ + F+SS ++D
Sbjct: 307 AIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALID 366
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
++ KC ++ A S+ R+ S+MIVGY L G EA + ++ V
Sbjct: 367 MFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVT 426
Query: 363 FSGYVKAQN 371
F G + A N
Sbjct: 427 FLGLLIACN 435
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 128/264 (48%), Gaps = 6/264 (2%)
Query: 288 NGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNS-FSISSMIVGYSLQGNMEEARR 346
+G+ S+ F +S ++D + + LL+ G++ S F I+ +I S G++ AR+
Sbjct: 16 SGIHSDSFYAS-LIDSSTHKAQLRQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQ 74
Query: 347 HFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQA 406
FD L V W A+ GY + + + + S+ V D+ LL AC +
Sbjct: 75 VFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLAR-VSPDSFTFPHLLKACGGLS 133
Query: 407 ALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQN--FIERDLVLYNVM 464
L G+ +HA + R+G + D + + L+ +Y+KC + A +F+ ER +V + +
Sbjct: 134 HLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAI 193
Query: 465 IACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYK 524
++ YA +G +A+ +F +M + +KPD V V++L+AF +E G S+
Sbjct: 194 VSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVM-KMG 252
Query: 525 ISPETDHYACMIDLYGRANQLEKA 548
+ E D + +Y + Q+ A
Sbjct: 253 LETEPDLLISLNTMYAKCGQVATA 276
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 96/189 (50%), Gaps = 10/189 (5%)
Query: 378 LLSEFV-TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDM 436
L S F+ T G+ +D+ L+ + +A L ++IHA +L +G+Q LI+ L+
Sbjct: 7 LASPFLYTNSGIHSDSF-YASLIDSSTHKAQL---RQIHARLLVLGLQFSGFLITKLIHA 62
Query: 437 YSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTF 496
S G++T+A +F + + +N +I Y+ + H + A+L++ +M + PD+ TF
Sbjct: 63 SSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTF 122
Query: 497 VAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA--CMIDLYGRANQLEKAIEFMKS 554
+L A ++MG ++ ++ +++ E D + +I LY + +L A +
Sbjct: 123 PHLLKACGGLSHLQMG-RFVHAQV--FRLGFEADVFVQNGLIALYAKCRRLGCARTVFEG 179
Query: 555 IPTEEDAVI 563
+P E ++
Sbjct: 180 LPLPERTIV 188
>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
Length = 1008
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 211/699 (30%), Positives = 326/699 (46%), Gaps = 97/699 (13%)
Query: 15 QAIKAGLTLTTITTNQL---IHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHD 71
QA AG+T + T +L + L +R +FD+MP +N+FS N I+SA S D
Sbjct: 244 QAAPAGVTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGD 303
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
L A+ LF SSPH++ T+ M+ + A G +DAL LF M E + D TVT+
Sbjct: 304 LPAAQHLFLSSPHRNATTWTIMMRAHA-AAGRTSDALSLFRAMLG--EGVIPDRVTVTTV 360
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF-------- 183
LNL + LH F +K D F ++L+D Y K A RVF
Sbjct: 361 LNLPGCTVP-----SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDA 415
Query: 184 -------EGCTEEVNLISKNAMVAACCREGEMEMAL------------------------ 212
GC++E + AA R G L
Sbjct: 416 VTYNAMMMGCSKEGLHTQALQLFAAMRRAGYSRHPLHLLQYSHSRSRSTSVLNVFVNNSL 475
Query: 213 --------------KTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWN 258
+ F PE D VS+N +I+ Y N A L+LF M + G
Sbjct: 476 LDFYSKCDCLDDMRRLFDEMPE-RDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQ 534
Query: 259 EHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLL 318
+A+ LS L +V K+IH+ ++ GL S + + ++D+Y KC
Sbjct: 535 VLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKC----------- 583
Query: 319 LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDL 378
G ++ A+ +F + +EK+ + WTAL +GYV+ E L
Sbjct: 584 --------------------GMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQL 623
Query: 379 LSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYS 438
S+ + + G+ D ++ A + A + G+++H+Y++R G + S LVDMY+
Sbjct: 624 FSD-MRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYA 682
Query: 439 KCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVA 498
KCG + A F ER+ + +N +I+ YAH+G + AI +FE ML G PD+VTF++
Sbjct: 683 KCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLS 742
Query: 499 ILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE 558
+L+A H G + KYF+ M Y ISP +HYAC+ID GR + + + +P +
Sbjct: 743 VLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFK 802
Query: 559 EDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIR 618
D +I S L+ CR++ N ELA A +KL +E + YV L+N+YA G W + ++
Sbjct: 803 ADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVK 862
Query: 619 KQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
K MR + +G SWV ++ +I+ F D++ P + I
Sbjct: 863 KIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEI 901
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 132/565 (23%), Positives = 231/565 (40%), Gaps = 147/565 (26%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIK---- 68
H AIK GL N L+ Y KH LL +R++F EM +++ ++N ++ C K
Sbjct: 372 HPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLH 431
Query: 69 -------------------------SHDLKQARS-------------------------L 78
SH ++ S L
Sbjct: 432 TQALQLFAAMRRAGYSRHPLHLLQYSHSRSRSTSVLNVFVNNSLLDFYSKCDCLDDMRRL 491
Query: 79 FDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSA--DEHIRMDEFTVTSTLNLCV 136
FD P +D V+YN ++ Y + A L+LF EMQ D + + L++
Sbjct: 492 FDEMPERDNVSYNVIIAAYAWNQ-CAATVLRLFREMQKLGFDRQV----LPYATMLSVAG 546
Query: 137 KLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKN 196
L +V G+Q+HA +V + ++LIDMYSKC + A F +E+ + IS
Sbjct: 547 SLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEK-SAISWT 605
Query: 197 AMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVR 256
A++ +GYVQNG EE L+LF M G+R
Sbjct: 606 ALI--------------------------------TGYVQNGQHEEALQLFSDMRRAGLR 633
Query: 257 WNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESM 316
+ TF+S + A L + +++HS+++++G S+ F S +VD+Y KC
Sbjct: 634 PDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKC--------- 684
Query: 317 LLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV---KAQNCE 373
G ++EA R FD + E+N + W A+ S Y +A+N
Sbjct: 685 ----------------------GCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAI 722
Query: 374 ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG------KEIHAYILRMGVQMDK 427
+F E + G D++ + +L AC+ H G K H + + K
Sbjct: 723 KMF----EGMLHCGFNPDSVTFLSVLAACS-----HNGLADECMKYFHLMKHQYSISPWK 773
Query: 428 KLISTLVDMYSKCGNMTYAE-IIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
+ + ++D + G + + ++ + + D +++ ++ HG++E A + +++
Sbjct: 774 EHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLF- 832
Query: 487 KGIKP-DAVTFVAILSAFRHCGSVE 510
G++P DA +V + + + G E
Sbjct: 833 -GMEPTDATPYVILSNIYARAGQWE 856
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 102/248 (41%), Gaps = 39/248 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H I++G + + + L+ +Y+K L E+ + FDEMPERN SWN +ISA +
Sbjct: 659 HSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEA 718
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
K A +F+ H C G+ D++ + + + DE
Sbjct: 719 KNAIKMFEGMLH----------C------GFNPDSVTFLSVLAACSHNGLADE------- 755
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C+K ++ H + + + + +ID + C+ + ++ + +
Sbjct: 756 --CMKYFHL----MKHQYSISPWKE----HYACVIDTLGRVGCFSQVQKMLVEMPFKADP 805
Query: 193 ISKNAMVAACCREGEMEMAL----KTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
I +++ +C G E+A K F +P DA + L + Y + G E+ +
Sbjct: 806 IIWTSILHSCRIHGNQELARVAADKLFGMEP--TDATPYVILSNIYARAGQWEDAACVKK 863
Query: 249 RMGENGVR 256
M + GVR
Sbjct: 864 IMRDRGVR 871
>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Vitis vinifera]
Length = 825
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 190/626 (30%), Positives = 319/626 (50%), Gaps = 77/626 (12%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
E +V N +I K + +K R LFD K+++++ +M+ GY+ ++ +A+KLF
Sbjct: 262 EMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQ-NSFDWEAMKLFG 320
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
EM + D F TS L C + GRQ+HA+ +K + ++ F + LIDMY+K
Sbjct: 321 EMNRLG--WKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAK 378
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
+A +VF+ E+ + +S+N +I
Sbjct: 379 SNLLIDAKKVFDVMAEQ---------------------------------NVISYNAMIE 405
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
GY E L+LF M + TF S L L ++ +K+IH ++K G+
Sbjct: 406 GYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSL 465
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
+ F S ++DVY KC +++AR F+ +
Sbjct: 466 DLFAGSALIDVYSKC-------------------------------SYVKDARHVFEEMN 494
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLS--EFVTKEGVVTDALILVILLGACALQAALHP 410
EK++VVW A+F GY + E L S +F ++ + L+ A + A+L
Sbjct: 495 EKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQK---PNEFTFAALITAASNLASLRH 551
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
G++ H +++MG+ + + LVDMY+KCG++ A +F + I RD+V +N MI+ +A
Sbjct: 552 GQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQ 611
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD 530
HG E+A+ +F EM+++GI+P+ VTFVA+LSA H G VE G +FNSM + I P T+
Sbjct: 612 HGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPG-FGIKPGTE 670
Query: 531 HYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRL 590
HYAC++ L GR+ +L +A EF++ +P E A++ S L+ CR+ N EL A E +
Sbjct: 671 HYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAIST 730
Query: 591 EGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVS 650
+ + Y+ L+N++A++G WA++ ++R +M + + G SW+ V +++++F D +
Sbjct: 731 DPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARDTT 790
Query: 651 HPKTNAIYSVLAIFTGELYEIAGAFY 676
H + + I SVL I + I GA Y
Sbjct: 791 HREAD-IGSVLDIL---IQHIKGAGY 812
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 167/641 (26%), Positives = 285/641 (44%), Gaps = 124/641 (19%)
Query: 19 AGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSL 78
A L +I+ N +IH H ++ + + F N +I+ C KS + AR +
Sbjct: 31 ANLLQLSISRNPIIHYKIIHG------QIIVSGLQSDTFLANILINVCSKSDRVDNARVV 84
Query: 79 FDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQ-SADEHIRMDEFTVTSTLNLCVK 137
FD PHK+L+T++SM+ Y + +GY +AL +F+++Q + EH +EF + S + C +
Sbjct: 85 FDKMPHKNLITWSSMVSMY-SQQGYSEEALMVFVDLQRKSGEH--PNEFVLASVIRACTQ 141
Query: 138 LLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNA 197
L V G QLH F+V++ D + +SLID YSK EEA VF+ +E+
Sbjct: 142 LGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKT------- 194
Query: 198 MVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRW 257
AV+W T+I+GY + G + L+LF +M E V
Sbjct: 195 --------------------------AVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVP 228
Query: 258 NEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESM- 316
+ + +S LSAC L ++ K+IH++VL+ G + V + ++D Y KC + +
Sbjct: 229 DRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLF 288
Query: 317 --LLLKGV-----------RNSFSISSM-------------------------------- 331
+++K + +NSF +M
Sbjct: 289 DQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALE 348
Query: 332 ----IVGYSLQGNME--------------------EARRHFDSLTEKNVVVWTALFSGYV 367
+ Y+++ N+E +A++ FD + E+NV+ + A+ GY
Sbjct: 349 QGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYS 408
Query: 368 KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDK 427
+ +L E + L V LLG A AL K+IH I++ GV +D
Sbjct: 409 SQEKLSEALELFHEMRVRL-FPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDL 467
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
S L+D+YSKC + A +F+ E+D+V++N M Y H E+A+ L+ +
Sbjct: 468 FAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFS 527
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTA-DYKISPETDHYACMIDLYGRANQLE 546
KP+ TF A+++A + S+ G+++ N + P + ++D+Y + +E
Sbjct: 528 RQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTN--ALVDMYAKCGSIE 585
Query: 547 KAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKL 587
+A + S D V S ++ + GEAEE L
Sbjct: 586 EARKMFNS-SIWRDVVCWNSMISTHAQH------GEAEEAL 619
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 143/554 (25%), Positives = 255/554 (46%), Gaps = 102/554 (18%)
Query: 11 ICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSH 70
I H Q I +GL T N LI++ SK + + +R +FD+MP +N+ +W++++S
Sbjct: 48 IIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVS------ 101
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQ-SADEHIRMDEFTVT 129
+ +GY +AL +F+++Q + EH +EF +
Sbjct: 102 --------------------------MYSQQGYSEEALMVFVDLQRKSGEH--PNEFVLA 133
Query: 130 STLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEE 189
S + C +L V G QLH F+V++ D + +SLID YSK EEA VF+ +E+
Sbjct: 134 SVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEK 193
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
AV+W T+I+GY + G + L+LF +
Sbjct: 194 T---------------------------------AVTWTTIIAGYTKCGRSAVSLELFAQ 220
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
M E V + + +S LSAC L ++ K+IH++VL+ G + V + ++D Y KC
Sbjct: 221 MRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNR 280
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
+K R F M+V KN++ WT + SGY++
Sbjct: 281 ---------VKAGRKLF--DQMVV--------------------KNIISWTTMISGYMQN 309
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
L E + + G D +L +C + AL G+++HAY ++ ++ D+ +
Sbjct: 310 SFDWEAMKLFGE-MNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFV 368
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+ L+DMY+K + A+ +F E++++ YN MI Y+ +A+ LF EM +
Sbjct: 369 KNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLF 428
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
P +TFV++L ++E+ K + + + +S + + +ID+Y + + ++ A
Sbjct: 429 PPSLLTFVSLLGVSASLFALELS-KQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDAR 487
Query: 550 EFMKSIPTEEDAVI 563
+ + E+D V+
Sbjct: 488 HVFEEM-NEKDIVV 500
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 126/511 (24%), Positives = 214/511 (41%), Gaps = 139/511 (27%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L++ H IKA L N LI +Y+K NLL +++K+FD M E+NV S+N +I
Sbjct: 347 LEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIE- 405
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM-- 123
GY + E ++AL+LF EM+ +R+
Sbjct: 406 ------------------------------GYSSQEKL-SEALELFHEMR-----VRLFP 429
Query: 124 -DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
T S L + L + +Q+H ++K FA S+LID+YSKC ++A V
Sbjct: 430 PSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHV 489
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
FE E+ D V WN + GY Q+ + EE
Sbjct: 490 FEEMNEK---------------------------------DIVVWNAMFFGYTQHLENEE 516
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
LKL+ + + + NE TFA+ ++A L +++ ++ H+ ++K GL PFV++ +VD
Sbjct: 517 ALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVD 576
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
+Y KC G++EEAR+ F+S ++VV W ++
Sbjct: 577 MYAKC-------------------------------GSIEEARKMFNSSIWRDVVCWNSM 605
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
S + + E + E + KEG+ + + V +L AC+ + G + G
Sbjct: 606 ISTHAQHGEAEEALGMFREMM-KEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPGFG 664
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
++ + + +V + + G + A + FIE+
Sbjct: 665 IKPGTEHYACVVSLLGRSGKLFEA----KEFIEK-------------------------- 694
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
I+P A+ + ++LSA R G+VE+G+
Sbjct: 695 ----MPIEPAAIVWRSLLSACRIAGNVELGK 721
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 156/366 (42%), Gaps = 75/366 (20%)
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
+R FA+ L + K IH ++ +GL S+ F+++ +++V K + ++ A
Sbjct: 23 LRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNAR 82
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK-------------------- 354
+ +N + SSM+ YS QG EEA F L K
Sbjct: 83 VVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQL 142
Query: 355 --------------------NVVVWTALFSGYVKAQNCEA---LFDLLSEFV-------- 383
+V V T+L Y K N E +FD LSE
Sbjct: 143 GVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTII 202
Query: 384 ---TKEG----------------VVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
TK G VV D ++ +L AC++ L GK+IHAY+LR G +
Sbjct: 203 AGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTE 262
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
MD +++ L+D Y+KC + +F + ++++ + MI+ Y + + +A+ LF EM
Sbjct: 263 MDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEM 322
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA--CMIDLYGRA 542
G KPD ++L++ CGS E E+ K + E+D + +ID+Y ++
Sbjct: 323 NRLGWKPDGFACTSVLTS---CGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKS 379
Query: 543 NQLEKA 548
N L A
Sbjct: 380 NLLIDA 385
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 129/283 (45%), Gaps = 18/283 (6%)
Query: 267 SACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSF 326
+ C + N++ + + +L+ + NP + I+ +++ G+++
Sbjct: 15 NPCLQIPNLRPKRREFANLLQLSISRNPIIHYKII------------HGQIIVSGLQSDT 62
Query: 327 SISSMIVGY-SLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTK 385
++++++ S ++ AR FD + KN++ W+++ S Y + E + + K
Sbjct: 63 FLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRK 122
Query: 386 EGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTY 445
G + +L ++ AC + G ++H +++R G D + ++L+D YSK GN+
Sbjct: 123 SGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEE 182
Query: 446 AEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRH 505
A ++F E+ V + +IA Y G ++ LF +M E + PD ++LSA
Sbjct: 183 ARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSA--- 239
Query: 506 CGSVEM--GEKYFNSMTADYKISPETDHYACMIDLYGRANQLE 546
C +E G K ++ + +ID Y + N+++
Sbjct: 240 CSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVK 282
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 180/593 (30%), Positives = 294/593 (49%), Gaps = 70/593 (11%)
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
D + A SL +L YN+++ G + + L ++ +M S + I D +T+
Sbjct: 73 DPRYALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLS--KGIVPDNYTIPF 130
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L C + V G ++H +K + + ++L+ MY+ C A +VF+ +
Sbjct: 131 VLKACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQR- 189
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
D VSW T+I GYV+ G A EG+ LF M
Sbjct: 190 --------------------------------DLVSWTTMIQGYVKMGFAREGVGLFFEM 217
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS-NPFVSSGIVDVYCKCEN 309
++ + T LS+C L +++ +++H ++++N ++ + FV + +VD+Y KC +
Sbjct: 218 CGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNALVDMYLKCGD 277
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV-K 368
N+A R+ F + KNVV W ++ SG K
Sbjct: 278 ANFA-------------------------------RKVFQEMPVKNVVSWNSMISGLAQK 306
Query: 369 AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK 428
Q E+L+ + + + GV D + LV +L +CA L GK +HAY+ R ++ D
Sbjct: 307 GQFKESLY--MFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGF 364
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
+ + LVDMY+KCG++ A +FQ +D+ Y MI A HG KA+ LF EM + G
Sbjct: 365 IGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMG 424
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
I+PD VTFV +L+A H G VE G KYF M+ Y + P+ +HY CM+DL GRA + +A
Sbjct: 425 IEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEA 484
Query: 549 IEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAE 608
EF++++P E DA +LG+ L C+++ EL +K+ ++E YV ++N+Y++
Sbjct: 485 EEFIRNMPIEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSA 544
Query: 609 GNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
W + ++RK M+ + GCS + ++ IH F GD SHPK IY +L
Sbjct: 545 NRWRDALKLRKTMKERNLEKTPGCSSIELDGVIHEFQKGDKSHPKIKEIYKLL 597
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 135/555 (24%), Positives = 239/555 (43%), Gaps = 143/555 (25%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
++E H QAIK GL +N L+ +Y+ +++R +RK+FD P+R++ SW T+I
Sbjct: 141 VREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQ- 199
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
GY+ G+ + + LF EM E+++ D
Sbjct: 200 ------------------------------GYVKM-GFAREGVGLFFEM--CGENLQADG 226
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSN-DASGFAVSSLIDMYSKCRCYEEACRVFE 184
T+ L+ C +L ++ GR+LH ++++ SN + F ++L+DMY KC
Sbjct: 227 MTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNALVDMYLKC----------- 275
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
G+ A K F P + + VSWN++ISG Q G +E L
Sbjct: 276 ---------------------GDANFARKVFQEMP-VKNVVSWNSMISGLAQKGQFKESL 313
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
+F +M GV+ ++ T + L++C L ++ K +H+++ +N + ++ F+ + +VD+Y
Sbjct: 314 YMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMY 373
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
KC +++ A + ++ +S ++MIVG ++ G
Sbjct: 374 AKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHG------------------------- 408
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK---EIHAYILRM 421
Q +AL DL SE + K G+ D + V +L AC+ + G+ E + I +
Sbjct: 409 -----QGGKAL-DLFSE-MPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNL 461
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
Q++ +VD+ + G + AE +N
Sbjct: 462 RPQLEH--YGCMVDLLGRAGLINEAEEFIRNM---------------------------- 491
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD-HYACMIDLYG 540
I+PDA A+L A + G VE+GE + KI P D Y M ++Y
Sbjct: 492 ------PIEPDAFVLGALLGACKIHGKVELGESVMKKIE---KIEPRKDGAYVLMSNIYS 542
Query: 541 RANQLEKAIEFMKSI 555
AN+ A++ K++
Sbjct: 543 SANRWRDALKLRKTM 557
>gi|414886078|tpg|DAA62092.1| TPA: hypothetical protein ZEAMMB73_488923 [Zea mays]
Length = 714
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 195/644 (30%), Positives = 326/644 (50%), Gaps = 21/644 (3%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTI-TTNQLIHIYSK-HNLLRESRKLFDEMPE--RNVF 57
R+ L+ H A K+GL + + N ++ YS+ + L + +LFDE P R+
Sbjct: 18 RAARLRCGEQLHALAAKSGLLASNVFVRNSVLSSYSRLPSSLASALQLFDETPPPLRDAT 77
Query: 58 SWNTIISACIKSHDLKQARSLFDSSP--HKDLVTYNSMLCGYINAEGYEADALKLFIEMQ 115
+ N++++A ++ L +A+ L + P H+D V+Y +++ + A G+ A A+ +F M
Sbjct: 78 ARNSVLAALTRAGYLDRAQGLLEEMPRIHRDAVSYTTLVTSFARA-GHAARAVAVFRSML 136
Query: 116 SADEHIRMDEFTVTSTLNL---CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
S E++ +E T+ + C VG +H F ++ + D ++L+ Y+
Sbjct: 137 S--ENVVPNEATLAGAITAFARCGAPATVGM---IHGFALQRALDGFVIVATNLVHAYAG 191
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
A +F+G T N ++ N M+ + ++MA + FWR PE D VSW TLI
Sbjct: 192 VLELCSARALFDGMTYR-NTVTWNVMLNGYVKAKMIDMAAEVFWRIPE-RDEVSWLTLID 249
Query: 233 GYVQNGDAEEGLKLFVRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI 291
GY+ + +K +V+M GE G E + AC V +++H+ +LKNG
Sbjct: 250 GYICADLISDAMKAYVQMVGEVGANDYEVLLVDLMKACARYSAVTEGQQLHTVILKNGFD 309
Query: 292 SNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL 351
++ FV + +V Y C + A+ L ++ S ++++ G + EAR FD +
Sbjct: 310 AHAFVQATLVHFYGCCGLIGLAQMTFRLSDKSHTASWNALLAALLRNGLIREARELFDDM 369
Query: 352 TEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG 411
E++ V W+ + SGYV+ + L + + + + L L A A L G
Sbjct: 370 PERDTVSWSTMISGYVQTGRSDMALKLFYSMLNTS-IEPNEVTLASALSAIADSGTLDQG 428
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER--DLVLYNVMIACYA 469
K IH YI+ VQ+ L S L+DMY+KCG++ A F ++ + +N MI A
Sbjct: 429 KWIHDYIMNRPVQLTDNLSSGLIDMYAKCGSIADAVQFFNRVNDKFSSVSPWNAMICSLA 488
Query: 470 HHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPET 529
HG+ ++ LF ++ IKP+++TF+ +LSA H G+V G+ YF SMT +Y I P
Sbjct: 489 IHGYAHMSLDLFSQLQRTSIKPNSITFIGVLSACCHAGTVTKGKYYFESMTREYGIQPTI 548
Query: 530 DHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLR 589
HY CM+DL GRA LE+A + + +P + D VI GS L+ R N L A E+L +
Sbjct: 549 KHYGCMVDLLGRAGYLEEAEQLVSMMPMKPDVVIWGSILSASRAQGNVALGERAAEELAK 608
Query: 590 LEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCS 633
L+ + A + L+N+YA G+W + +RK+++ R G S
Sbjct: 609 LDQTHGASKIALSNIYADAGHWINVSVVRKELQDANLERLTGRS 652
>gi|297812081|ref|XP_002873924.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319761|gb|EFH50183.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 939
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 183/615 (29%), Positives = 330/615 (53%), Gaps = 12/615 (1%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + +K+G N ++++Y+K LL ++ +F + + S+N ++ +S L
Sbjct: 318 HGRVLKSGHDSNGFICNSVLNMYAKCRLLVDAESVFRAHAKLDSASFNIMVDGYARSRRL 377
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
A LFD P + V+Y +++ GY + ++A++LF EM++ I ++E T+ + +
Sbjct: 378 GDALKLFDVMPERSCVSYTTLIKGYAQNNQW-SEAMELFREMRNLG--IMLNEVTLATVI 434
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C L + + LH+ +K + D FA ++L+ MY C C ++A ++F+ E NL
Sbjct: 435 SACSHLGGIWDCKMLHSLAIKLNLDDRVFASTNLLLMYCICSCLKDARKLFDEMPER-NL 493
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
++ N M+ + G +E A K + Q D VSW T+I G ++ +E L + M
Sbjct: 494 VTWNVMLNGYSKAGLIEQA-KELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLR 552
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAK--EIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
G++ +E LSA R+V +K ++H ++K G F+ + I+ Y N+
Sbjct: 553 RGMKPSEVMMVDLLSASA--RSVGSSKGLQLHGTIVKMGFDCYDFLQATIIHFYAVSNNL 610
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
A + + S +++I G+ G +E+AR FD +K++ W A+ SGY ++
Sbjct: 611 KLALQQFEVSVKDHIASRNALIAGFVKNGMVEQAREVFDQTRDKDIFSWNAMMSGYAQSL 670
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
+ + L E ++ V DA+ +V + A + +L GK H Y+ R + + LI
Sbjct: 671 SPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHEYLNRSSIPPNDNLI 730
Query: 431 STLVDMYSKCGNMTYAEIIF---QNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
+ +++MY+KCG++ A IF +N + +N +I A HGH + A+ L+ ++
Sbjct: 731 AAIINMYAKCGSIETALNIFHQTKNIFSSTISPWNAIICGSATHGHAKLALDLYSDLQSL 790
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEK 547
IKP+++TFV +LSA H G VE+G+ YF SM +D+ I P+ HY CM+DL G++ +LE+
Sbjct: 791 PIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKSGKLEE 850
Query: 548 AIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAA 607
A E +K++P + D +I G L+ R++ N E+A A +L ++ ++ V L+NVYA
Sbjct: 851 AKEMIKNMPVKADVMIWGMLLSASRIHGNVEIAELAAAELAAIDPSHGGCKVMLSNVYAD 910
Query: 608 EGNWAEMGRIRKQMR 622
G W ++ +R+ MR
Sbjct: 911 AGRWEDVALVREVMR 925
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 138/484 (28%), Positives = 229/484 (47%), Gaps = 49/484 (10%)
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
E + S L C +V GRQ+H ++K+ +D++GF +S+++MY+KCR +A VF
Sbjct: 295 ERALVSALGSCASSNDVTCGRQIHGRVLKSGHDSNGFICNSVLNMYAKCRLLVDAESVFR 354
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
+++ S N MV R + ALK F PE VS+ TLI GY QN E +
Sbjct: 355 A-HAKLDSASFNIMVDGYARSRRLGDALKLFDVMPE-RSCVSYTTLIKGYAQNNQWSEAM 412
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
+LF M G+ NE T A+ +SAC L + K +HS +K L F S+ ++ +Y
Sbjct: 413 ELFREMRNLGIMLNEVTLATVISACSHLGGIWDCKMLHSLAIKLNLDDRVFASTNLLLMY 472
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
C C + A + RN + + M+ GYS G +E+A+ FD +TEK++V W +
Sbjct: 473 CICSCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAKELFDQITEKDIVSWGTMID 532
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
G ++ + +E + + G+ +++V LL A A G ++H I++MG
Sbjct: 533 GCLRKNQLDEALVYYTEML-RRGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKMGFD 591
Query: 425 MDKKLISTLVDMYS-------------------------------KCGNMTYAEIIFQNF 453
L +T++ Y+ K G + A +F
Sbjct: 592 CYDFLQATIIHFYAVSNNLKLALQQFEVSVKDHIASRNALIAGFVKNGMVEQAREVFDQT 651
Query: 454 IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG-IKPDAVTFVAILSAFRHCGSVEMG 512
++D+ +N M++ YA + A+ LF EM+ +KPDA+T V++ SA GS+E G
Sbjct: 652 RDKDIFSWNAMMSGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEG 711
Query: 513 EK---YFNSMTADYKISPETDHYACMIDLYGRANQLEKAI-------EFMKSIPTEEDAV 562
++ Y N + I P + A +I++Y + +E A+ S + +A+
Sbjct: 712 KRAHEYLNRSS----IPPNDNLIAAIINMYAKCGSIETALNIFHQTKNIFSSTISPWNAI 767
Query: 563 ILGS 566
I GS
Sbjct: 768 ICGS 771
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 153/342 (44%), Gaps = 34/342 (9%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
RS+ + L H +K G +IH Y+ N L+ + + F+ + ++ S N
Sbjct: 571 RSVGSSKGLQLHGTIVKMGFDCYDFLQATIIHFYAVSNNLKLALQQFEVSVKDHIASRNA 630
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I+ +K+ ++QAR +FD + KD+ ++N+M+ GY + + AL LF EM S+ + +
Sbjct: 631 LIAGFVKNGMVEQAREVFDQTRDKDIFSWNAMMSGYAQSLSPQL-ALHLFREMISSSQ-V 688
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+ D T+ S + L ++ G++ H ++ ++S + ++++I+MY+KC E A
Sbjct: 689 KPDAITMVSVFSAISSLGSLEEGKRAHEYLNRSSIPPNDNLIAAIINMYAKCGSIETALN 748
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F + N+ S WN +I G +G A+
Sbjct: 749 IFH---QTKNIFSST---------------------------ISPWNAIICGSATHGHAK 778
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG-I 300
L L+ + ++ N TF LSACC V+ K + + I G +
Sbjct: 779 LALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCM 838
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYS-LQGNM 341
VD+ K + A+ M+ V+ I M++ S + GN+
Sbjct: 839 VDLLGKSGKLEEAKEMIKNMPVKADVMIWGMLLSASRIHGNV 880
>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g56690, mitochondrial; Flags: Precursor
gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 193/645 (29%), Positives = 320/645 (49%), Gaps = 89/645 (13%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLV 88
N ++ Y + L +E+R+LFDEM ERNV SWN ++S IK+ + +AR++F+ P +++V
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV 111
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLH 148
++ +M+ GY+ EG +A LF M +E V+ T V FG +
Sbjct: 112 SWTAMVKGYMQ-EGMVGEAESLFWRMPERNE--------VSWT---------VMFGGLI- 152
Query: 149 AFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEM 208
+D L DM ++++ M+ CREG +
Sbjct: 153 -------DDGRIDKARKLYDMMPV-----------------KDVVASTNMIGGLCREGRV 188
Query: 209 EMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG-VRWNEHTFASALS 267
+ A F E N V+W T+I+GY QN + KLF M E V W LS
Sbjct: 189 DEARLIFDEMRERN-VVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLS 247
Query: 268 ACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFS 327
G I + AE + ++ +
Sbjct: 248 ---------------------GRIED-------------------AEEFFEVMPMKPVIA 267
Query: 328 ISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY-VKAQNCEALFDLLSEFVTKE 386
++MIVG+ G + +ARR FD + +++ W + Y K EAL DL ++ + K+
Sbjct: 268 CNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEAL-DLFAQ-MQKQ 325
Query: 387 GVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYA 446
GV L+ +L CA A+L G+++HA+++R D + S L+ MY KCG + A
Sbjct: 326 GVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKA 385
Query: 447 EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHC 506
+++F F +D++++N +I+ YA HG E+A+ +F EM G P+ VT +AIL+A +
Sbjct: 386 KLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYA 445
Query: 507 GSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGS 566
G +E G + F SM + + ++P +HY+C +D+ GRA Q++KA+E ++S+ + DA + G+
Sbjct: 446 GKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGA 505
Query: 567 FLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKG 626
L C+ + +LA A +KL E +N YV L+++ A+ W ++ +RK MR
Sbjct: 506 LLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNV 565
Query: 627 NRFAGCSWVYVEHEIHIFTVGDV-SHPKTNAIYSVLAIFTGELYE 670
++F GCSW+ V ++H+FT G + +HP+ I +L G L E
Sbjct: 566 SKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLRE 610
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 116/505 (22%), Positives = 217/505 (42%), Gaps = 68/505 (13%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
++ N L+ Y K+ ++ E+R +F+ MPERNV SW ++ ++ + +A SLF P +
Sbjct: 80 VSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER 139
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQSAD------------EHIRMDE-------- 125
+ V++ M G I+ +G A KL+ M D R+DE
Sbjct: 140 NEVSWTVMFGGLID-DGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEM 198
Query: 126 -----FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
T T+ + + V R+L M + + + +S++ Y+ E+A
Sbjct: 199 RERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTE----VSWTSMLLGYTLSGRIEDAE 254
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
FE + +I+ NAM+ GE+ A + F E D +W +I Y + G
Sbjct: 255 EFFEVMPMK-PVIACNAMIVGFGEVGEISKARRVF-DLMEDRDNATWRGMIKAYERKGFE 312
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
E L LF +M + GVR + + S LS C L +++ +++H+ +++ + +V+S +
Sbjct: 313 LEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVL 372
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
+ +Y KC G + +A+ FD + K++++W
Sbjct: 373 MTMYVKC-------------------------------GELVKAKLVFDRFSSKDIIMWN 401
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI-L 419
++ SGY E + E + G + + + L+ +L AC+ L G EI +
Sbjct: 402 SIISGYASHGLGEEALKIFHEMPSS-GTMPNKVTLIAILTACSYAGKLEEGLEIFESMES 460
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
+ V + S VDM + G + A E+I I+ D ++ ++ H + A
Sbjct: 461 KFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAE 520
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAF 503
+ +++ E +PD +LS+
Sbjct: 521 VAAKKLFEN--EPDNAGTYVLLSSI 543
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 153/349 (43%), Gaps = 53/349 (15%)
Query: 199 VAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE-NGVRW 257
++ R G++ A K F+ + SWN+++SGY NG +E +LF M E N V W
Sbjct: 24 ISRLSRIGKINEARK-FFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSW 82
Query: 258 NEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS-----NPFVSSGIV----DVYCKCE 308
N +S R + A+ + + + ++S ++ G+V ++ +
Sbjct: 83 N-----GLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMP 137
Query: 309 NMNYAESMLLLKG------------------VRNSFSISSMIVGYSLQGNMEEARRHFDS 350
N ++ G V++ + ++MI G +G ++EAR FD
Sbjct: 138 ERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDE 197
Query: 351 LTEKNVVVWTALFSGYVKAQNCEA---LFDLLSEFVTKEGVVTDALILVILLGACALQAA 407
+ E+NVV WT + +GY + + LF+++ E T+ +LLG L
Sbjct: 198 MRERNVVTWTTMITGYRQNNRVDVARKLFEVMPE-------KTEVSWTSMLLGY-TLSGR 249
Query: 408 LHPGKEIHAYILRMGVQMDKKLIS--TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMI 465
+ +E V K +I+ ++ + + G ++ A +F +RD + MI
Sbjct: 250 IEDAEEFFE------VMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMI 303
Query: 466 ACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
Y G E +A+ LF +M ++G++P + ++ILS S++ G +
Sbjct: 304 KAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQ 352
>gi|357161281|ref|XP_003579039.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial-like [Brachypodium distachyon]
Length = 698
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 207/689 (30%), Positives = 339/689 (49%), Gaps = 61/689 (8%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTIT-TNQLIHIYSK--------HNLLRESRKLFDEM 51
+RS H +K+G +++ TN L+ +Y++ H R++ +LFDEM
Sbjct: 15 LRSCGPAAGRQLHSALLKSGHVPSSLAPTNALLLMYARCASSSSPLHR--RDAPRLFDEM 72
Query: 52 PERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLF 111
P RN FS+N++++AC+ S D + A +LF S P ++ T+N+++ G +A + A L
Sbjct: 73 PARNCFSYNSLLTACLNSRDHRAALALFRSMPERNAFTWNTVIAGMASAGDLDT-ARALL 131
Query: 112 IEMQSAD---------EHIRM------------------------------DEFTVTSTL 132
EM D ++R D F + + +
Sbjct: 132 HEMPVKDPVACNTVLHRYVRCGRVDEAFALVRAIGSGNGSVPAPSSSSPCNDPFVLATVV 191
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C FG Q HA MV + +L+DMY KC + A R F+G + +
Sbjct: 192 GACADRTRYDFGTQAHARMVVAKTELDSVLSCALVDMYCKCGDLDSARRAFDG-LAQADE 250
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
S +A+V G+++ AL+ R+ + + WN+++SG ++ LF RM
Sbjct: 251 FSVSALVYGYASRGQLDEALRLLGREEGNLNILLWNSIVSGCAFACLGDDAFVLFARMMR 310
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+ V + T+AS L+ C +K +++H LK+G IS+ +S ++D Y KC
Sbjct: 311 SDVLPDSATYASVLNVCGFSGMLKPGQQMHGCGLKSGAISDMIAASALIDFYSKCSLWED 370
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
A ++ ++SMI YS G +EEA+R F +T K+V+ W ++ G +QN
Sbjct: 371 ACRAFSELRFHDTVVLNSMITVYSNCGRIEEAKRVFHRITSKSVISWNSMVVGL--SQNG 428
Query: 373 EALFDLLSEFVTKE--GVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
A+ D L F GV D + L L A + ++ G++I + +G+Q D +
Sbjct: 429 HAI-DALELFCEMHHLGVRLDKVALASALSASSNICSISFGEQIFSLATVLGLQSDHVVA 487
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
S+L+D+Y KCGN+ IF + D VL+N M+ YA +GH KA+ L E M +GI+
Sbjct: 488 SSLIDLYCKCGNLANGCKIFDGIDKSDEVLWNSMLIGYASNGHGHKALELLELMRARGIR 547
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
P TFV +LSA H G VE G +F M D+ + P +HYAC+ DL RA +L++A E
Sbjct: 548 PTERTFVGVLSACCHSGLVEEGLTWFKQMQEDFYVKPSAEHYACVTDLLVRAGRLDEAFE 607
Query: 551 FMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKAR----YVQLANVYA 606
F++++P D V + + C+ N L + ++L +E + + YVQL++V A
Sbjct: 608 FIENMPFTADTVSWTTVVGGCKAQGNEALMQKMAKRLKEMEQSGSSPHSSLYVQLSSVLA 667
Query: 607 AEGNWAEMGRIRKQMRGMKGNRFAGCSWV 635
A+G+WA+ +R MR K + G SW+
Sbjct: 668 AQGDWAKSAEMRGTMRERKIAKNPGYSWI 696
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 183/580 (31%), Positives = 301/580 (51%), Gaps = 39/580 (6%)
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFM-VKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
+ T L CV+ +V ++L M + F + L+ +Y+K +A +F+
Sbjct: 24 SYTRLLLQCVRSNDVVQAKRLQTHMDLHLYQPTDTFLQNRLLHLYAKSGNLSDARDLFDK 83
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
+ ++ S NAM++A + G +E L+ + Q ++DAVS+NT+I+G+ NG + + L+
Sbjct: 84 MSRR-DVFSWNAMLSAYSKSGNVE-DLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALE 141
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
FVRM E G ++T S L AC L ++K K+IH ++ L + FV + + ++Y
Sbjct: 142 FFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYA 201
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNME----------------------- 342
KC ++ A + +N S +SMI GY G E
Sbjct: 202 KCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISN 261
Query: 343 ------------EARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVT 390
EA + F + EK+ V WT + G + E L E + E V
Sbjct: 262 ILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLL-ENVRP 320
Query: 391 DALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIF 450
D + ++ +CA A+L G+ +H + GV D + S LVDMYSKCG A I+F
Sbjct: 321 DNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVF 380
Query: 451 QNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVE 510
+ + R+++ +N MI YA +G + +A+ L+EEML + +KPD +TFV +LSA H G VE
Sbjct: 381 KRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSACMHAGLVE 440
Query: 511 MGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNV 570
G+ YF S++ + ++P DHY+CMI+L GRA ++KA++ +KS+ E + +I + L+V
Sbjct: 441 RGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLSV 500
Query: 571 CRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFA 630
CR+N + A L L+ +N Y+ L+N+YAA G W ++ +R M+ K +FA
Sbjct: 501 CRINCDVNNGEMAARHLFELDPHNAGPYIMLSNIYAACGRWKDVAAVRSLMKNNKIKKFA 560
Query: 631 GCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYE 670
SW+ +++++H F D +H +T IY L +L E
Sbjct: 561 AYSWIEIDNQVHKFVAEDRTHSETEQIYEELNRLIKKLQE 600
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 197/381 (51%), Gaps = 42/381 (11%)
Query: 25 TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPH 84
T N+L+H+Y+K L ++R LFD+M R+VFSWN ++SA KS +++ R++FD
Sbjct: 58 TFLQNRLLHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSV 117
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
D V+YN+++ G+ + G + AL+ F+ MQ +E ++T S L+ C +LL++ G
Sbjct: 118 HDAVSYNTVIAGF-SGNGCSSQALEFFVRMQ--EEGFESTDYTHVSVLHACSQLLDIKRG 174
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
+Q+H +V TS S F ++L +MY+KC ++A +F+ + N++S N+M++ +
Sbjct: 175 KQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNK-NVVSWNSMISGYLQ 233
Query: 205 EGEMEMALKTF----------------------------------WRQPELNDAVSWNTL 230
G+ E K F +R+ + D V W T+
Sbjct: 234 NGQPETCTKLFCEMQSSGLMPDQVTISNILSAYFQCGYIDEACKTFREIKEKDKVCWTTM 293
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL 290
+ G QNG E+ L LF M VR + T +S +S+C L ++ + +H + G+
Sbjct: 294 MVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGV 353
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGV--RNSFSISSMIVGYSLQGNMEEARRHF 348
+ VSS +VD+Y KC A++ ++ K + RN S +SMI+GY+ G EA +
Sbjct: 354 DHDLLVSSALVDMYSKCGET--ADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALY 411
Query: 349 DSLTEKNVVVWTALFSGYVKA 369
+ + +N+ F G + A
Sbjct: 412 EEMLHENLKPDNITFVGVLSA 432
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 165/397 (41%), Gaps = 102/397 (25%)
Query: 4 LNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
L++K H + + L + N L ++Y+K L ++R LFD M +NV SWN++I
Sbjct: 169 LDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMI 228
Query: 64 SACIKSHDLKQARSLF----DSSPHKDLVTYNSML-----CGYIN--------------- 99
S +++ + LF S D VT +++L CGYI+
Sbjct: 229 SGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSAYFQCGYIDEACKTFREIKEKDKV 288
Query: 100 ----------AEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHA 149
G E DAL LF EM E++R D FT++S ++ C +L ++ G+ +H
Sbjct: 289 CWTTMMVGCAQNGKEEDALLLFREMLL--ENVRPDNFTISSVVSSCARLASLCQGQAVHG 346
Query: 150 FMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEME 209
V D S+L+DMYSKC +A VF+ ++++N
Sbjct: 347 KAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFK------RMLTRN------------- 387
Query: 210 MALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
+SWN++I GY QNG E L L+ M ++ + TF LSAC
Sbjct: 388 --------------VISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSAC 433
Query: 270 CGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFS-I 328
+H+ +++ G Y S+ + G+ +F
Sbjct: 434 -----------MHAGLVERG--------------------QGYFYSISKIHGMNPTFDHY 462
Query: 329 SSMIVGYSLQGNMEEARRHFDSLT-EKNVVVWTALFS 364
S MI G M++A S+T E N ++W+ L S
Sbjct: 463 SCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLS 499
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 181/608 (29%), Positives = 302/608 (49%), Gaps = 73/608 (12%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
E ++ N ++ +K+ ++ F + ++L + N++L G+ + E + L
Sbjct: 122 ESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRIL-- 179
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
+Q E + +T S L C ++ G+ +H ++K+ + +SL+++Y+K
Sbjct: 180 -IQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAK 238
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C AC+VF GE+ PE D VSW LI+
Sbjct: 239 CGSANYACKVF----------------------GEI----------PE-RDVVSWTALIT 265
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
G+V G GL++F +M G N +TF S L +C L +V K++H+ ++KN L
Sbjct: 266 GFVAEGYGS-GLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDG 324
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
N FV + +VD+Y K N F +E+A F+ L
Sbjct: 325 NDFVGTALVDMYAK-----------------NRF--------------LEDAETIFNRLI 353
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
++++ WT + +GY + E + + +EGV + L L C+ A L G+
Sbjct: 354 KRDLFAWTVIVAGYAQDGQGEKAVKCFIQ-MQREGVKPNEFTLASSLSGCSRIATLDSGR 412
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
++H+ ++ G D + S LVDMY+KCG + AE++F + RD V +N +I Y+ HG
Sbjct: 413 QLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHG 472
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
KA+ FE ML++G PD VTF+ +LSA H G +E G+K+FNS++ Y I+P +HY
Sbjct: 473 QGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHY 532
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
ACM+D+ GRA + + F++ + + +I + L C+++ N E A KL LE
Sbjct: 533 ACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEP 592
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVS 650
+ Y+ L+N++AA+G W ++ +R M RG+K + GCSWV V ++H+F D S
Sbjct: 593 EIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVK--KEPGCSWVEVNGQVHVFLSHDGS 650
Query: 651 HPKTNAIY 658
HPK I+
Sbjct: 651 HPKIREIH 658
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 134/509 (26%), Positives = 220/509 (43%), Gaps = 118/509 (23%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L E H Q IK+G+ + N L+++Y+K + K+F E+PER+V SW +I+
Sbjct: 206 DLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALIT 265
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
G++ AEGY L++F +M + E +
Sbjct: 266 -------------------------------GFV-AEGY-GSGLRIFNQMLA--EGFNPN 290
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
+T S L C L +V G+Q+HA +VK S D + F ++L+DMY+K R E+A +F
Sbjct: 291 MYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIF- 349
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
N + K + A W +++GY Q+G E+ +
Sbjct: 350 ------NRLIKRDLFA---------------W-----------TVIVAGYAQDGQGEKAV 377
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
K F++M GV+ NE T AS+LS C + + +++HS +K G + FV+S +VD+Y
Sbjct: 378 KCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMY 437
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
KC G +E+A FD L ++ V W +
Sbjct: 438 AKC-------------------------------GCVEDAEVVFDGLVSRDTVSWNTIIC 466
Query: 365 GYVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM-G 422
GY + Q +AL E + EG V D + + +L AC+ + GK+ + ++ G
Sbjct: 467 GYSQHGQGGKALKAF--EAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYG 524
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMI------ACYAHHG---H 473
+ + + +VD+ + G E +FIE + NV+I AC H
Sbjct: 525 ITPTIEHYACMVDILGRAGKFHEVE----SFIEEMKLTSNVLIWETVLGACKMHGNIEFG 580
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSA 502
E A+ LFE LE I + + + +A
Sbjct: 581 ERAAMKLFE--LEPEIDSNYILLSNMFAA 607
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 155/341 (45%), Gaps = 42/341 (12%)
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKE---------IHSWVLKNGLISNP- 294
K+ R+ +NG+ + H ++S ++ +++CA++ + W K ++P
Sbjct: 10 KIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPY 69
Query: 295 ---------------------FVSSGIVDVYCKCENMNYAESM---LLLKGVRNSFSISS 330
F+ + ++ + +Y ES+ + G + IS+
Sbjct: 70 PLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISN 129
Query: 331 MIVG-YSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVV 389
V Y ++E + F ++ +N+ L SG+ + C+ +L + + EG
Sbjct: 130 AFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLV-EGFE 188
Query: 390 TDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEII 449
+ + +L CA + L+ GK IH +++ G+ D L ++LV++Y+KCG+ YA +
Sbjct: 189 PNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKV 248
Query: 450 FQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSV 509
F ERD+V + +I + G+ + +F +ML +G P+ TF++IL + V
Sbjct: 249 FGEIPERDVVSWTALITGFVAEGY-GSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDV 307
Query: 510 EMGEKYFNSMTADYKISPETDHY--ACMIDLYGRANQLEKA 548
++G++ + K S + + + ++D+Y + LE A
Sbjct: 308 DLGKQVHAQIV---KNSLDGNDFVGTALVDMYAKNRFLEDA 345
>gi|115459414|ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|32482936|emb|CAE02340.1| OSJNBb0072M01.1 [Oryza sativa Japonica Group]
gi|38345689|emb|CAD41109.2| OSJNBb0070J16.5 [Oryza sativa Japonica Group]
gi|113564878|dbj|BAF15221.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|215768472|dbj|BAH00701.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195211|gb|EEC77638.1| hypothetical protein OsI_16630 [Oryza sativa Indica Group]
Length = 1027
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 208/691 (30%), Positives = 332/691 (48%), Gaps = 118/691 (17%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
+ NVF +++I+ K A+++FD S K++V +N+ML G++ E E +A+++F
Sbjct: 357 DANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPE-EAIRMFQ 415
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
M ++ DEFT S L C L + G+Q+H +K D S F ++ +DMYSK
Sbjct: 416 YMMRYT--LQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSK 473
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
+A +F +LI D++SWN L
Sbjct: 474 YGAIGDAKALF-------SLI--------------------------PYKDSISWNALTV 500
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
G QN + EE + + RM +G+ ++ +F++A++AC +R + K+IH +K G+ S
Sbjct: 501 GLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICS 560
Query: 293 NPFVSSGIVDVYCK-----------------------------CENMNYAESMLLLKGV- 322
N V S ++D+Y K +N N E++ L + V
Sbjct: 561 NHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVL 620
Query: 323 -----RNSFSISSMIVG---------------YSLQGN---------------------M 341
+S + SS++ G Y+L+ +
Sbjct: 621 KDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKML 680
Query: 342 EEARRHFDSLTE-KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKE-GVVTDALILVILL 399
E+A + + + KN+ WTA+ SGY AQN L+S + + V +D +L
Sbjct: 681 EDANKLLTEMPDHKNLFEWTAIISGY--AQNGYGDHSLVSFWRMRHCNVRSDEATFASVL 738
Query: 400 GACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIE---- 455
AC+ A GKEIH I + G + S L+DMYSKCG++ + F+ F E
Sbjct: 739 KACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISS---FEAFKELKNK 795
Query: 456 RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKY 515
+D++ +N MI +A +G+ ++A+LLF++M E IKPD VTF+ +L A H G + G +
Sbjct: 796 QDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHF 855
Query: 516 FNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNR 575
F SM Y ++P DHYAC IDL GR L++A E + +P D V+ ++L CR+++
Sbjct: 856 FGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHK 915
Query: 576 NAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWV 635
+ E A KL+ LE + YV L++++AA GNWAE R+ MR +F GCSW+
Sbjct: 916 DEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWI 975
Query: 636 YVEHEIHIFTVGDVSHPKTNAIYSVLAIFTG 666
V ++ +F V D HP IY +L TG
Sbjct: 976 TVGNKTSLFLVQDKYHPDNLRIYEMLGDLTG 1006
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/468 (25%), Positives = 214/468 (45%), Gaps = 68/468 (14%)
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
R D+F + L+ C ++ + +GRQ+H +VK+ +S F ++L+DMY+KC A R
Sbjct: 155 RPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARR 214
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDA----------------- 224
VF+G + I ++M+A R G + AL F R ++ A
Sbjct: 215 VFDGIACP-DTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSG 273
Query: 225 -----------------VSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALS 267
V+WN +ISG+ Q+G L L+ M G+ TFAS LS
Sbjct: 274 RLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLS 333
Query: 268 ACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFS 327
A ++ +++H+ + +GL +N FV S ++++Y KC
Sbjct: 334 AAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKC-------------------- 373
Query: 328 ISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEG 387
G +A+ FD EKN+V+W A+ +G+V+ + E + +++ +
Sbjct: 374 -----------GCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMF-QYMMRYT 421
Query: 388 VVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAE 447
+ TD V +LGAC ++ + GK++H ++ + + + + +DMYSK G + A+
Sbjct: 422 LQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAK 481
Query: 448 IIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCG 507
+F +D + +N + A + EE+A+ + + M GI PD V+F ++A +
Sbjct: 482 ALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIR 541
Query: 508 SVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSI 555
+ E G K + + Y I + +IDLY + +E + + +
Sbjct: 542 ATETG-KQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQV 588
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 138/594 (23%), Positives = 254/594 (42%), Gaps = 125/594 (21%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN------------ 60
H +K+G + + L+ +Y+K + +R++FD + + W+
Sbjct: 181 HCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCY 240
Query: 61 -----------------------TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGY 97
TIIS S L A +L P V +N+++ G+
Sbjct: 241 QEALALFSRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGH 300
Query: 98 INAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSND 157
+ G E + L L+ +M+S + T S L+ + G+Q+HA V D
Sbjct: 301 AQS-GLEFNVLGLYKDMRSWG--LWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLD 357
Query: 158 ASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWR 217
A+ F SSLI++Y+KC C +A VF+ E+
Sbjct: 358 ANVFVGSSLINLYAKCGCPSDAKNVFDLSCEK---------------------------- 389
Query: 218 QPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKC 277
+ V WN +++G+VQN EE +++F M ++ +E TF S L AC L +
Sbjct: 390 -----NIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYL 444
Query: 278 AKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSL 337
K++H +KN + + FV++ +D+Y K + A+++ L ++S S +++ VG L
Sbjct: 445 GKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVG--L 502
Query: 338 QGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVI 397
N+EE E+ V + + G+ D +
Sbjct: 503 AQNLEE---------EEAVCMLKRM---------------------RLHGITPDDVSFST 532
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD 457
+ AC+ A GK+IH ++ G+ + + S+L+D+YSK G++ + IF
Sbjct: 533 AINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASS 592
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR-----------HC 506
+V N +IA + + +E++AI LF+++L+ G+KP +VTF +ILS HC
Sbjct: 593 IVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHC 652
Query: 507 GSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEED 560
+++ G Y +++ + +Y ++ LE A + + +P ++
Sbjct: 653 YTLKSGVLYDDTLLG-----------VSLAGIYLKSKMLEDANKLLTEMPDHKN 695
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 98/450 (21%), Positives = 192/450 (42%), Gaps = 68/450 (15%)
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
R+ G + + + +++V C+ G + A E + ++L+S + ++G
Sbjct: 81 RILRGGSPLLGRLG-DSLVELYCKSGRVGYAWSALGYAGERASGAA-SSLLSCHARSGSP 138
Query: 241 EEGLKLF--VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
+ L F +R G R ++ A LSAC + + +++H V+K+G S+ F +
Sbjct: 139 GDVLGAFRYIRCTAGG-RPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEA 197
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE----- 353
+VD+Y KC ++ A + ++ SSMI Y G +EA F + +
Sbjct: 198 ALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAP 257
Query: 354 ------------------------------KNVVVWTALFSGYVKAQ---NCEALFDLLS 380
+ V W A+ SG+ ++ N L+ +
Sbjct: 258 DQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMR 317
Query: 381 EFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC 440
+ G+ +L A A A G+++HA + G+ + + S+L+++Y+KC
Sbjct: 318 SW----GLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKC 373
Query: 441 GNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAIL 500
G + A+ +F E+++V++N M+ + + E+AI +F+ M+ ++ D TFV+IL
Sbjct: 374 GCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSIL 433
Query: 501 SAFRHCGSVEMGEKYF-----NSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSI 555
A + S +G++ N M ++ T +D+Y + + A I
Sbjct: 434 GACTYLSSFYLGKQVHCVTIKNCMDISLFVANAT------LDMYSKYGAIGDAKALFSLI 487
Query: 556 PTEE----DAVILGSFLN------VCRLNR 575
P ++ +A+ +G N VC L R
Sbjct: 488 PYKDSISWNALTVGLAQNLEEEEAVCMLKR 517
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 108/268 (40%), Gaps = 66/268 (24%)
Query: 3 SLNLKEALICHVQAIKAG-LTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
SLN H +K+G L T+ L IY K +L ++ KL EMP+
Sbjct: 641 SLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPD-------- 692
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
HK+L + +++ GY GY +L F M+ + +
Sbjct: 693 ----------------------HKNLFEWTAIISGYAQ-NGYGDHSLVSFWRMRHCN--V 727
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
R DE T S L C + G+++H + K+ + A S+LIDMYSKC
Sbjct: 728 RSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKC-------- 779
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
G++ + + F D + WN++I G+ +NG A+
Sbjct: 780 ------------------------GDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYAD 815
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSAC 269
E L LF +M E ++ +E TF L AC
Sbjct: 816 EALLLFQKMEELQIKPDEVTFLGVLIAC 843
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 58/145 (40%), Gaps = 2/145 (1%)
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
+ +H ILR G + +L +LV++Y K G + YA ER + +++C+A
Sbjct: 76 RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 135
Query: 472 GHEEKAILLFEEM-LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD 530
G + F + G +PD +LSA G + G + + S
Sbjct: 136 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKS-GFSSSVF 194
Query: 531 HYACMIDLYGRANQLEKAIEFMKSI 555
A ++D+Y + + A I
Sbjct: 195 CEAALVDMYAKCGDVPNARRVFDGI 219
>gi|356558692|ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Glycine max]
Length = 696
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 195/677 (28%), Positives = 328/677 (48%), Gaps = 54/677 (7%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R L++A H Q + +LI +Y++ L +RK+FD +P
Sbjct: 40 RCFTLQQARQLHSQLVLTTAHRLPFLAARLIAVYARFAFLSHARKVFDAIP--------- 90
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+S H L+ +NS++ + + GY AL+L++EM+
Sbjct: 91 -----------------LESLHH--LLLWNSIIRANV-SHGYHQHALELYVEMRKLG--F 128
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
D FT+ + C L + R +H ++ V+ L+ MY K E+A +
Sbjct: 129 LPDGFTLPLVIRACSSLGSSYLCRIVHCHALQMGFRNHLHVVNELVGMYGKLGRMEDARQ 188
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWR------QPELNDAVSWNTLISGYV 235
+F+G +++S N MV+ + A + F R QP ++V+W +L+S +
Sbjct: 189 LFDGMFVR-SIVSWNTMVSGYALNRDSLGASRVFKRMELEGLQP---NSVTWTSLLSSHA 244
Query: 236 QNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF 295
+ G +E L+LF M G+ A LS C + V KEIH +V+K G F
Sbjct: 245 RCGLYDETLELFKVMRTRGIEIGAEALAVVLSVCADMAEVDWGKEIHGYVVKGGYEDYLF 304
Query: 296 VSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHF------- 348
V + ++ Y K ++M A + L +N S +++I Y+ G +EA F
Sbjct: 305 VKNALIGTYGKHQHMGDAHKVFLEIKNKNLVSWNALISSYAESGLCDEAYAAFLHMEKSD 364
Query: 349 ---DSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQ 405
SL NV+ W+A+ SG+ E +L + + V+ + + + +L CA
Sbjct: 365 SDDHSLVRPNVISWSAVISGFAYKGRGEKSLELFRQMQLAK-VMANCVTISSVLSVCAEL 423
Query: 406 AALHPGKEIHAYILRMGVQMDKKLIST-LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVM 464
AAL+ G+E+H Y +R + D L+ L++MY KCG+ ++F N RDL+ +N +
Sbjct: 424 AALNLGRELHGYAIR-NMMSDNILVGNGLINMYMKCGDFKEGHLVFDNIEGRDLISWNSL 482
Query: 465 IACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYK 524
I Y HG E A+ F EM+ +KPD +TFVAILSA H G V G F+ M +++
Sbjct: 483 IGGYGMHGLGENALRTFNEMIRARMKPDNITFVAILSACSHAGLVAAGRNLFDQMVTEFR 542
Query: 525 ISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAE 584
I P +HYACM+DL GRA L++A + ++++P E + + G+ LN CR+ ++ ++ E
Sbjct: 543 IEPNVEHYACMVDLLGRAGLLKEATDIVRNMPIEPNEYVWGALLNSCRMYKDMDIVEETA 602
Query: 585 EKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIF 644
++L L+ ++ L+N+YAA G W + R+R R + G SW+ V +++ F
Sbjct: 603 SQILTLKSKITGSFMLLSNIYAANGRWDDSARVRVSARTKGLKKIPGQSWIEVRKKVYTF 662
Query: 645 TVGDVSHPKTNAIYSVL 661
+ G++ H IY +L
Sbjct: 663 SAGNLVHFGLEDIYVIL 679
>gi|356509996|ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Glycine max]
Length = 586
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 175/537 (32%), Positives = 276/537 (51%), Gaps = 68/537 (12%)
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
+ LN C K + G+Q+H + K D +S+IDMYSKC EA RVF
Sbjct: 7 LNKILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLP 66
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
+ + +SWN +I+GY + EE L LF
Sbjct: 67 ---------------------------------VRNVISWNAMIAGYTNERNGEEALNLF 93
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL--ISNPFVSSGIVDVYC 305
M E G + +T++S+L AC +IH+ ++++G ++ V+ +VD+Y
Sbjct: 94 REMREKGEVPDGYTYSSSLKACSCADAAGEGMQIHAALIRHGFPYLAQSAVAGALVDLYV 153
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
KC M EAR+ FD + EK+V+ W+ L G
Sbjct: 154 KCRRM-------------------------------AEARKVFDRIEEKSVMSWSTLILG 182
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
Y + N + DL E + D +L ++G A A L GK++HAY +++ +
Sbjct: 183 YAQEDNLKEAMDLFRELRESRHRM-DGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGL 241
Query: 426 -DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
+ + ++++DMY KCG A+ +F+ +ER++V + VMI Y HG KA+ LF EM
Sbjct: 242 LEMSVANSVLDMYMKCGLTVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELFNEM 301
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
E GI+PD+VT++A+LSA H G ++ G+KYF+ + ++ KI P+ +HYACM+DL GR +
Sbjct: 302 QENGIEPDSVTYLAVLSACSHSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLGRGGR 361
Query: 545 LEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANV 604
L++A ++ +P + + I + L+VCR++ + E+ + E LLR EGNN A YV ++N+
Sbjct: 362 LKEAKNLIEKMPLKPNVGIWQTLLSVCRMHGDVEMGKQVGEILLRREGNNPANYVMVSNM 421
Query: 605 YAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
YA G W E +IR+ ++ + AG SWV ++ EIHIF GD HP I+ VL
Sbjct: 422 YAHAGYWKESEKIRETLKRKGLKKEAGRSWVEMDKEIHIFYNGDGMHPLIEEIHEVL 478
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 120/501 (23%), Positives = 201/501 (40%), Gaps = 137/501 (27%)
Query: 18 KAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARS 77
K G + + N +I +YSK ++ E+ ++F+ +P RNV SW
Sbjct: 32 KLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLPVRNVISW------------------ 73
Query: 78 LFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVK 137
N+M+ GY N E +AL LF EM+ E D +T +S+L C
Sbjct: 74 -------------NAMIAGYTNERNGE-EALNLFREMREKGE--VPDGYTYSSSLKACSC 117
Query: 138 LLNVGFGRQLHAFMVKTSND--ASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISK 195
G G Q+HA +++ A +L+D+Y KCR EA +VF+ E+
Sbjct: 118 ADAAGEGMQIHAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEK------ 171
Query: 196 NAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGV 255
+SW+TLI GY Q + +E + LF + E+
Sbjct: 172 ---------------------------SVMSWSTLILGYAQEDNLKEAMDLFRELRESRH 204
Query: 256 RWNEHTFASALSACCGLRNVKCAKEIHSWVLK--NGLISNPFVSSGIVDVYCKCENMNYA 313
R + +S + ++ K++H++ +K GL+ V++ ++D+Y KC
Sbjct: 205 RMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLEMS-VANSVLDMYMKC------ 257
Query: 314 ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE 373
G EA F + E+NVV WT + +GY K
Sbjct: 258 -------------------------GLTVEADALFREMLERNVVSWTVMITGYGKHGIGN 292
Query: 374 ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL 433
+L +E + + G+ D++ + +L AC+ H+ +++ G KK S L
Sbjct: 293 KAVELFNE-MQENGIEPDSVTYLAVLSACS-----------HSGLIKEG----KKYFSIL 336
Query: 434 VDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDA 493
C N I+ + Y M+ G ++A L E+M +KP+
Sbjct: 337 ------CSNQK---------IKPKVEHYACMVDLLGRGGRLKEAKNLIEKM---PLKPNV 378
Query: 494 VTFVAILSAFRHCGSVEMGEK 514
+ +LS R G VEMG++
Sbjct: 379 GIWQTLLSVCRMHGDVEMGKQ 399
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 143/367 (38%), Gaps = 113/367 (30%)
Query: 8 EALICHVQAIKAGLTL--TTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
E + H I+ G + L+ +Y K + E+RK+FD + E++V SW+T+I
Sbjct: 123 EGMQIHAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILG 182
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
+ +LK+ A+ LF E++ + RMD
Sbjct: 183 YAQEDNLKE--------------------------------AMDLFRELRESRH--RMDG 208
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVS-SLIDMYSKCRCYEEACRVFE 184
F ++S + + + G+Q+HA+ +K +V+ S++DMY KC
Sbjct: 209 FVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLEMSVANSVLDMYMKC----------- 257
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
G T E + +R+ + VSW +I+GY ++G + +
Sbjct: 258 GLTVEAD----------------------ALFREMLERNVVSWTVMITGYGKHGIGNKAV 295
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG------LISNPFVSS 298
+LF M ENG+ + T+ + LSAC HS ++K G L SN +
Sbjct: 296 ELFNEMQENGIEPDSVTYLAVLSACS-----------HSGLIKEGKKYFSILCSNQKIKP 344
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK-NVV 357
+ C + LL +G G ++EA+ + + K NV
Sbjct: 345 KVEHYACMVD--------LLGRG-----------------GRLKEAKNLIEKMPLKPNVG 379
Query: 358 VWTALFS 364
+W L S
Sbjct: 380 IWQTLLS 386
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 68/114 (59%)
Query: 389 VTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEI 448
++++ +L +L C+ + L GK++H + ++G + + ++++DMYSKCG + A
Sbjct: 1 MSESRLLNKILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAAR 60
Query: 449 IFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
+F R+++ +N MIA Y + + E+A+ LF EM EKG PD T+ + L A
Sbjct: 61 VFNTLPVRNVISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKA 114
>gi|357483943|ref|XP_003612258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513593|gb|AES95216.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 907
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 196/646 (30%), Positives = 340/646 (52%), Gaps = 33/646 (5%)
Query: 31 LIHIYSKHNLLRESRKLFDEMPER-NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVT 89
+I Y++ +L ++R+LF+ +P++ + WN +I+ K A +F+ P KDLV+
Sbjct: 116 MITCYTRKGMLEKARELFELVPDKLDTACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVS 175
Query: 90 YNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHA 149
YNSML GY G A+K F M A+ ++ V +N C ++G +L
Sbjct: 176 YNSMLAGYTQ-NGKMGLAMKFFERM--AERNVVSWNLMVAGFVNNC----DLGSAWEL-- 226
Query: 150 FMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEME 209
+ D + + +++ +++ EA ++F+ + N++S NAM+AA ++ +++
Sbjct: 227 --FEKIPDPNAVSWVTMLCGFARHGKIVEARKLFDRMPCK-NVVSWNAMIAAYVQDLQID 283
Query: 210 MALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
A+K F P D VSW T+I+GYV+ G +E +++ +M V A+ +
Sbjct: 284 EAVKLFKETP-YKDCVSWTTMINGYVRVGKLDEAREVYNQMPYKDV-------AAKTALM 335
Query: 270 CGL---RNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSF 326
GL + A ++ S + K I + +G YC+ M+ A ++ V+N+
Sbjct: 336 SGLIQNGRIDEASQVFSQLNKRDAICWNSMIAG----YCQSGRMSEALNLFRQMPVKNAV 391
Query: 327 SISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVT-- 384
S ++MI GY+ G M+ A F+++ +NV+ W +L +G++ QN L D L V
Sbjct: 392 SWNTMISGYAQAGEMDRATEIFEAMGVRNVISWNSLITGFL--QNGLYL-DALKSLVLMG 448
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
+EG D L +CA AAL GK++H IL+ G D + + L+ MY+KCG +
Sbjct: 449 QEGKKPDQSTFACSLSSCANLAALQVGKQLHELILKSGYINDLFVSNALIAMYAKCGGVQ 508
Query: 445 YAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR 504
AE +F++ DL+ +N +I+ YA +G+ +A FE+M +G PD VTF+ +LSA
Sbjct: 509 SAEKVFKDIEGVDLISWNSLISGYALNGYANEAFWAFEQMSSEGTVPDEVTFIGMLSACS 568
Query: 505 HCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVIL 564
H G G F M + I P +HY+C++DL GR +LE+A ++ + + +A +
Sbjct: 569 HAGLTNQGVDLFKCMIEGFAIEPLAEHYSCLVDLLGRMGRLEEAFNIVRGMKVKANAGLW 628
Query: 565 GSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGM 624
GS L CR+++N EL A +LL LE +N + Y+ L+N++A G W ++ R+R MR
Sbjct: 629 GSLLAACRVHKNMELGKIAALRLLELEPHNASNYITLSNMHAEAGRWEDVERLRVLMRER 688
Query: 625 KGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYE 670
+ + GCSW+ V+++I F D +T +I +L + + +
Sbjct: 689 RAGKLPGCSWIEVQNQIQNFVSDDPGKLRTESIKIILNTLSAHMRD 734
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 191/401 (47%), Gaps = 65/401 (16%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
++ N ++ Y+++ + + K F+ M ERNV SWN +++ + + DL A LF+ P
Sbjct: 174 VSYNSMLAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAGFVNNCDLGSAWELFEKIPDP 233
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQ------------------SADEHIRM---- 123
+ V++ +MLCG+ G +A KLF M DE +++
Sbjct: 234 NAVSWVTMLCGFAR-HGKIVEARKLFDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFKET 292
Query: 124 ---DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
D + T+ +N V++ + R+++ M A +S LI +EA
Sbjct: 293 PYKDCVSWTTMINGYVRVGKLDEAREVYNQMPYKDVAAKTALMSGLIQNGR----IDEAS 348
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+VF + + I N+M+A C+ G M AL F RQ + +AVSWNT+ISGY Q G+
Sbjct: 349 QVFSQLNKR-DAICWNSMIAGYCQSGRMSEALNLF-RQMPVKNAVSWNTMISGYAQAGEM 406
Query: 241 E-------------------------------EGLKLFVRMGENGVRWNEHTFASALSAC 269
+ + LK V MG+ G + ++ TFA +LS+C
Sbjct: 407 DRATEIFEAMGVRNVISWNSLITGFLQNGLYLDALKSLVLMGQEGKKPDQSTFACSLSSC 466
Query: 270 CGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLL-LKGVRNSFSI 328
L ++ K++H +LK+G I++ FVS+ ++ +Y KC + AE + ++GV + S
Sbjct: 467 ANLAALQVGKQLHELILKSGYINDLFVSNALIAMYAKCGGVQSAEKVFKDIEGV-DLISW 525
Query: 329 SSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
+S+I GY+L G EA F+ ++ + V F G + A
Sbjct: 526 NSLISGYALNGYANEAFWAFEQMSSEGTVPDEVTFIGMLSA 566
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 119/302 (39%), Gaps = 77/302 (25%)
Query: 319 LKGVRNSFSISSMIVGYSLQGNMEEARR-------------------------------H 347
L+ +N F+ + I+ QG ++EA+R
Sbjct: 11 LEQSKNVFNQNKKIIYLGKQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQL 70
Query: 348 FDSLTEKNVVVWTALFSGYVK---AQNCEALFDLLSEFVTKEGVVTDALILVILLGACAL 404
FD ++++N+V W + +GY+ + LFDL++E D +++
Sbjct: 71 FDKMSQRNLVSWNTMIAGYLHNNMVEEAHKLFDLMAE--------RDNFSWALMITCYTR 122
Query: 405 QAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVM 464
+ L +E+ + ++D + ++ Y+K G AE +F+ +DLV YN M
Sbjct: 123 KGMLEKARELFELVPD---KLDTACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSM 179
Query: 465 IACYAHHGHEEKAILLFEEMLEKGI---------------------------KPDAVTFV 497
+A Y +G A+ FE M E+ + P+AV++V
Sbjct: 180 LAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAGFVNNCDLGSAWELFEKIPDPNAVSWV 239
Query: 498 AILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPT 557
+L F G + K F+ M +S + MI Y + Q+++A++ K P
Sbjct: 240 TMLCGFARHGKIVEARKLFDRMPCKNVVS-----WNAMIAAYVQDLQIDEAVKLFKETPY 294
Query: 558 EE 559
++
Sbjct: 295 KD 296
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 189/610 (30%), Positives = 298/610 (48%), Gaps = 75/610 (12%)
Query: 55 NVFSWNTIISACI--KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAE-GYEADALKLF 111
+ FS + I++ C S L AR +F+ P+ T NS++ GY N +A
Sbjct: 71 DPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQL 130
Query: 112 IEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYS 171
+ +Q D D FT S C L G+QLH K + + ++L++MYS
Sbjct: 131 MMLQGLDP----DRFTFPSLFKSCGVLCE---GKQLHCHSTKLGFASDAYIQNTLMNMYS 183
Query: 172 KCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLI 231
C C A +VF+ +++K+ VSW T+I
Sbjct: 184 NCGCLVSARKVFD------KMVNKSV---------------------------VSWATMI 210
Query: 232 SGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI 291
Y Q E +KLF RM V+ NE T + L+AC R+++ AK++H ++ + G+
Sbjct: 211 GAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIG 270
Query: 292 SNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL 351
+ ++S ++DVYCKC G AR F+ +
Sbjct: 271 FHTVLTSALMDVYCKC-------------------------------GCYPLARDLFNKM 299
Query: 352 TEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG 411
EKN+ W + +G+V+ + E L +E + GV D + + LL AC AL G
Sbjct: 300 PEKNLFCWNIMINGHVEDSDYEEALSLFNE-MQLSGVKGDKVTMASLLIACTHLGALELG 358
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
K +H YI + +++D L + LVDMY+KCG++ A +FQ E+D++ + +I A
Sbjct: 359 KWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMC 418
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH 531
G KA+ LF EM +KPDA+TFV +L+A H G V G YFNSM Y I P +H
Sbjct: 419 GQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEH 478
Query: 532 YACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLE 591
Y CM+D+ GRA ++ +A + ++++P D +L L+ CR++ N +A A ++L+ L+
Sbjct: 479 YGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELD 538
Query: 592 GNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSH 651
N YV L+N+Y++ NW ++R+ M + GCS + V +H F GDVSH
Sbjct: 539 PKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSH 598
Query: 652 PKTNAIYSVL 661
P+++ IY L
Sbjct: 599 PQSSEIYETL 608
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 119/488 (24%), Positives = 203/488 (41%), Gaps = 111/488 (22%)
Query: 24 TTITTNQLIHIYSKHNLLRESRKLFDEM------PERNVFSWNTIISAC--------IKS 69
TT T N +I Y+ NL R++ + M P+R F++ ++ +C +
Sbjct: 104 TTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDR--FTFPSLFKSCGVLCEGKQLHC 161
Query: 70 HDLK------------------------QARSLFDSSPHKDLVTYNSMLCGYINAEGYEA 105
H K AR +FD +K +V++ +M+ Y +
Sbjct: 162 HSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWD-LPH 220
Query: 106 DALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS 165
+A+KLF M+ A ++ +E T+ + L C + ++ +Q+H ++ +T S+
Sbjct: 221 EAIKLFRRMEIAS--VKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSA 278
Query: 166 LIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAV 225
L+D+Y KC CY +A F + PE N
Sbjct: 279 LMDVYCKCGCYP--------------------------------LARDLFNKMPEKN-LF 305
Query: 226 SWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWV 285
WN +I+G+V++ D EE L LF M +GV+ ++ T AS L AC L ++ K +H ++
Sbjct: 306 CWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYI 365
Query: 286 LKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEAR 345
K + + + + +VD+Y KC G++E A
Sbjct: 366 EKEKIEVDVALGTALVDMYAKC-------------------------------GSIESAM 394
Query: 346 RHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQ 405
R F + EK+V+ WTAL G +L E E V DA+ V +L AC+
Sbjct: 395 RVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSE-VKPDAITFVGVLAACSHA 453
Query: 406 AALHPG-KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERD-LVLYN 462
++ G ++ + G+Q + +VDM + G + AE + QN + D VL
Sbjct: 454 GLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVG 513
Query: 463 VMIACYAH 470
++ AC H
Sbjct: 514 LLSACRIH 521
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 166/389 (42%), Gaps = 57/389 (14%)
Query: 190 VNLISKNAMVAACC--REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
V+ S + +VA C G + A F + P + N++I GY + + +
Sbjct: 70 VDPFSASKIVAFCALHDSGSLPYARLVFNQIPN-PTTFTCNSIIRGYTNKNLPRQAILFY 128
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKC-AKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
M G+ + TF S +C V C K++H K G S+ ++ + ++++Y
Sbjct: 129 QLMMLQGLDPDRFTFPSLFKSC----GVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSN 184
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
C G + AR+ FD + K+VV W + Y
Sbjct: 185 C-------------------------------GCLVSARKVFDKMVNKSVVSWATMIGAY 213
Query: 367 VKAQNCEALFDLLSEFVTK------EGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
A +DL E + V + + LV +L ACA L K++H YI
Sbjct: 214 -------AQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDE 266
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
G+ L S L+D+Y KCG A +F E++L +N+MI + E+A+ L
Sbjct: 267 TGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSL 326
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
F EM G+K D VT ++L A H G++E+G K+ + KI + ++D+Y
Sbjct: 327 FNEMQLSGVKGDKVTMASLLIACTHLGALELG-KWLHVYIEKEKIEVDVALGTALVDMYA 385
Query: 541 RANQLEKAIEFMKSIPTEE----DAVILG 565
+ +E A+ + +P ++ A+I+G
Sbjct: 386 KCGSIESAMRVFQEMPEKDVMTWTALIVG 414
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 104/438 (23%), Positives = 168/438 (38%), Gaps = 113/438 (25%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII--------- 63
H + K G N L+++YS L +RK+FD+M ++V SW T+I
Sbjct: 160 HCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLP 219
Query: 64 --------------------------SACIKSHDLKQA---------------------- 75
+AC +S DL+ A
Sbjct: 220 HEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSAL 279
Query: 76 -------------RSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
R LF+ P K+L +N M+ G++ YE +AL LF EMQ + ++
Sbjct: 280 MDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYE-EALSLFNEMQLSG--VK 336
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
D+ T+ S L C L + G+ LH ++ K + ++L+DMY+KC E A RV
Sbjct: 337 GDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRV 396
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
F+ E+ D ++W LI G G +
Sbjct: 397 FQEMPEK---------------------------------DVMTWTALIVGLAMCGQGLK 423
Query: 243 GLKLFVRMGENGVRWNEHTFASALSAC--CGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
L+LF M + V+ + TF L+AC GL N A +S K G+ + +
Sbjct: 424 ALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAY-FNSMPNKYGIQPSIEHYGCM 482
Query: 301 VDVYCKCENMNYAESMLL-LKGVRNSFSISSMIVGYSLQGNM---EEARRHFDSLTEKNV 356
VD+ + + AE ++ + + F + ++ + GN+ E A + L KN
Sbjct: 483 VDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNG 542
Query: 357 VVWTALFSGYVKAQNCEA 374
+ L + Y +N EA
Sbjct: 543 GTYVLLSNIYSSMKNWEA 560
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 96/224 (42%), Gaps = 33/224 (14%)
Query: 279 KEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQ 338
K+IH+ +L+ L +PF +S IV +C +
Sbjct: 57 KQIHAQMLRTCLFVDPFSASKIV-AFCALHD----------------------------S 87
Query: 339 GNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVIL 398
G++ AR F+ + ++ GY +N L + + +G+ D L
Sbjct: 88 GSLPYARLVFNQIPNPTTFTCNSIIRGYTN-KNLPRQAILFYQLMMLQGLDPDRFTFPSL 146
Query: 399 LGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDL 458
+C + L GK++H + ++G D + +TL++MYS CG + A +F + + +
Sbjct: 147 FKSCGV---LCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSV 203
Query: 459 VLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
V + MI YA +AI LF M +KP+ +T V +L+A
Sbjct: 204 VSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTA 247
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 177/532 (33%), Positives = 277/532 (52%), Gaps = 67/532 (12%)
Query: 130 STLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEE 189
S L C+ + G+++HA M+KT + + + LI +Y+KCRC +A RV +
Sbjct: 482 SVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLD----- 536
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
EM PE N VSW +ISGY Q G A E L LFV
Sbjct: 537 -------------------EM--------PERN-VVSWTAMISGYSQRGYASEALHLFVE 568
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
M +G NE TFA+ L++C + ++IHS V+K S+ FV S ++D+Y K
Sbjct: 569 MLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKA-- 626
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
G + EARR FD L E++VV TA+ SGY +
Sbjct: 627 -----------------------------GKICEARRVFDGLPERDVVSCTAIISGYAQL 657
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
E DL + +EG+ ++ + +L A + AAL G+++H+++LR + L
Sbjct: 658 GLDEEALDLFRR-LQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVL 716
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG- 488
++L+DMYSKCG++TY+ IF + ER ++ +N M+ Y+ HG +A+ LF+ M E+
Sbjct: 717 QNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENK 776
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYK-ISPETDHYACMIDLYGRANQLEK 547
+KPD+VTF+A+LS H G + G + F M PE +HY C++DL+GRA ++E+
Sbjct: 777 VKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEE 836
Query: 548 AIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAA 607
A EF+K +P E A I GS L CR+++N + +LL +E N YV L+N+YA+
Sbjct: 837 AFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYAS 896
Query: 608 EGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYS 659
G W ++ +R+ M+ + G SW+ ++ +H F D SHP+ +++
Sbjct: 897 AGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFA 948
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 128/481 (26%), Positives = 209/481 (43%), Gaps = 92/481 (19%)
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
L AR + D P +++V++ +M+ GY + GY ++AL LF+EM + +EFT +
Sbjct: 528 LGDARRVLDEMPERNVVSWTAMISGY-SQRGYASEALHLFVEMLMSG--TAPNEFTFATV 584
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L C GRQ+H+ ++KTS ++ F SSL+DMY+K EA RVF+G E
Sbjct: 585 LTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPER-- 642
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
D VS +ISGY Q G EE L LF R+
Sbjct: 643 -------------------------------DVVSCTAIISGYAQLGLDEEALDLFRRLQ 671
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
G+R N T+AS L+A GL + +++HS VL+ L + + ++D+Y KC ++
Sbjct: 672 REGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLT 731
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVV---------VWTAL 362
Y+ + R S ++M+VGYS G EA F + E+N V V +
Sbjct: 732 YSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGC 791
Query: 363 FSGYVKAQNCEALFDLLS-----------------------------EFVTKEGVVTDAL 393
G ++ + E +++++ EF+ K A
Sbjct: 792 SHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAA 851
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGN----MTYAEII 449
I LLGAC + +H G+ + +L + + + L ++Y+ G T E++
Sbjct: 852 IWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYV-ILSNLYASAGRWDDVRTVRELM 910
Query: 450 FQ---------NFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAIL 500
+ ++IE D L+ + +H EE +F ++ E IK +V L
Sbjct: 911 KEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEE----VFAKVRELSIKIKEAGYVPEL 966
Query: 501 S 501
S
Sbjct: 967 S 967
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 130/319 (40%), Gaps = 78/319 (24%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNV--------- 56
++E H IK +LI +Y+K L ++R++ DEMPERNV
Sbjct: 493 IREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISG 552
Query: 57 --------------------------FSWNTIISACIKSHDLK----------------- 73
F++ T++++C S +
Sbjct: 553 YSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESH 612
Query: 74 ------------------QARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQ 115
+AR +FD P +D+V+ +++ GY G + +AL LF +Q
Sbjct: 613 IFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQL-GLDEEALDLFRRLQ 671
Query: 116 SADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRC 175
E +R + T S L L + GRQ+H+ +++ +SLIDMYSKC
Sbjct: 672 R--EGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGS 729
Query: 176 YEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN----DAVSWNTLI 231
+ R+F+ E +IS NAM+ + G A++ F E N D+V++ ++
Sbjct: 730 LTYSRRIFDSMPERT-VISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVL 788
Query: 232 SGYVQNGDAEEGLKLFVRM 250
SG G + GL++F M
Sbjct: 789 SGCSHGGMEDRGLEIFYEM 807
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 187/546 (34%), Positives = 286/546 (52%), Gaps = 38/546 (6%)
Query: 128 VTSTL-NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS-LIDMYSKCRCYEEACRVFEG 185
V STL CV+ + GR++HA K SN G +S+ L+DMY+KC +A +F+
Sbjct: 89 VYSTLIAACVRHRALELGRRVHAH-TKASNFVPGVFISNRLLDMYAKCGSLVDAQMLFDE 147
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
+L S N M+ + G +E A K F P+ D SWN ISGYV + E L+
Sbjct: 148 MGHR-DLCSWNTMIVGYAKLGRLEQARKLFDEMPQ-RDNFSWNAAISGYVTHNQPREALE 205
Query: 246 LFVRMGEN-GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
LF M + N+ T +SAL+A + ++ KEIH ++++ L + V S ++D+Y
Sbjct: 206 LFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLY 265
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
KC G+++EAR FD + +++VV WT +
Sbjct: 266 GKC-------------------------------GSLDEARGIFDQMKDRDVVSWTTMIH 294
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
+ E F L + + + GV + +L ACA AA H GKE+H Y++ G
Sbjct: 295 RCFEDGRREEGFLLFRDLM-QSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYD 353
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
IS LV MYSKCGN A +F + DLV + +I YA +G ++A+ FE +
Sbjct: 354 PGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELL 413
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
L+ G KPD VT+V +LSA H G V+ G +YF+S+ + + DHYAC+IDL R+ +
Sbjct: 414 LQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGR 473
Query: 545 LEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANV 604
++A + ++P + D + S L CR++ N ELA A + L +E N A Y+ LAN+
Sbjct: 474 FKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAAKALYEIEPENPATYITLANI 533
Query: 605 YAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIF 664
YA G W+E+ +RK M M + G SW+ ++ ++H+F VGD SHPKT+ I+ L
Sbjct: 534 YANAGLWSEVANVRKDMDNMGIVKKPGKSWIEIKRQVHVFLVGDTSHPKTSDIHEFLGEL 593
Query: 665 TGELYE 670
+ ++ E
Sbjct: 594 SKKIKE 599
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 170/374 (45%), Gaps = 46/374 (12%)
Query: 236 QNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF 295
Q +E ++L R R + +++ ++AC R ++ + +H+ + + F
Sbjct: 67 QQKRVKEAVELLHRTDH---RPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVF 123
Query: 296 VSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKN 355
+S+ ++D+Y KC ++ A+ + G R+ S ++MIVGY+ G +E+AR+ FD + +++
Sbjct: 124 ISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRD 183
Query: 356 VVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIH 415
W A SGYV +L E ++ L L A A L GKEIH
Sbjct: 184 NFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIH 243
Query: 416 AYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEE 475
Y++R + +D+ + S L+D+Y KCG++ A IF +RD+V + MI G E
Sbjct: 244 GYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRRE 303
Query: 476 KAILLFEEMLEKGIKPDAVTFVAILSA--------------------------------- 502
+ LLF ++++ G++P+ TF +L+A
Sbjct: 304 EGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALV 363
Query: 503 --FRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSI---PT 557
+ CG+ + + FN M P+ + +I Y + Q ++A+ F + + T
Sbjct: 364 HMYSKCGNTRVARRVFNEMH-----QPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGT 418
Query: 558 EEDAVILGSFLNVC 571
+ D V L+ C
Sbjct: 419 KPDQVTYVGVLSAC 432
>gi|224137724|ref|XP_002322628.1| predicted protein [Populus trichocarpa]
gi|222867258|gb|EEF04389.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 199/624 (31%), Positives = 310/624 (49%), Gaps = 92/624 (14%)
Query: 51 MPERNVFSWNTIISACIKSHDLKQARSLFDS-SPHKDLVTYNSMLCGYINAEGYEADALK 109
M ER+V +W +IS IK + AR LFD KD+VT+ +ML GY+
Sbjct: 1 MHERDVVTWTAVISGYIKCGLIVDARRLFDRVDAIKDVVTWTAMLSGYV----------- 49
Query: 110 LFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDM 169
++ +E R+ F V N+ + +++ID
Sbjct: 50 ---RLKRIEEAERL--FEVMPVKNVV--------------------------SWNTMIDG 78
Query: 170 YSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNT 229
Y K R ++A VFE E N++S NA++AA + G +E A + F P+ D +SW T
Sbjct: 79 YGKNREVDKAIEVFERMHER-NMVSWNAVIAALVQCGRVEEARRRFDEMPK-RDVISWTT 136
Query: 230 LISGYVQNGDAEEGLKLFVRMGE-NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKN 288
++ G ++G +E K+F RM E N V WN
Sbjct: 137 MVMGLARSGRVDEARKVFDRMPERNVVSWN------------------------------ 166
Query: 289 GLISNPFVSSGIVDVYCKCENMNYAESMLLLKGV--RNSFSISSMIVGYSLQGNMEEARR 346
+V Y K NM E+ L + + RN S ++MI G+ G + AR+
Sbjct: 167 ----------AMVTGYAK--NMRLDEAFDLFERMPERNLSSWNTMITGFIQNGELAWARK 214
Query: 347 HFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQA 406
F+ + EKNVV WT + +GYV+ E+ + E + G + V +LGAC+ A
Sbjct: 215 VFNEMPEKNVVSWTTMITGYVQEGESESALKVFVEMIKDGGARPNEGTFVNVLGACSDMA 274
Query: 407 ALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFI--ERDLVLYNVM 464
L G+++H I + Q + S L++MYSKCG ++ A IF + + +RDLVL+N M
Sbjct: 275 GLGEGQQVHLLISKSVYQDRTFVASALLNMYSKCGELSIARKIFDDVVISQRDLVLWNGM 334
Query: 465 IACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYK 524
IA YAHHG +AI LFE+M G KP+ V++V +LSA H G V+ G YF+ + D
Sbjct: 335 IAAYAHHGCGMEAIELFEDMQGLGFKPNDVSYVELLSACSHAGLVDEGLNYFDELGRDNS 394
Query: 525 ISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAE 584
I DH+AC++DL GRA +L++A +F+K + T+ + I G L C + + E+ A
Sbjct: 395 IQLREDHHACLVDLCGRAGRLKEAYDFIKQLGTKASSSIWGGLLAGCNAHGDLEIGQLAA 454
Query: 585 EKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIF 644
++L + + N Y+ L+N+YA+ W E R+R +M+ + GCSW+ V + +H+F
Sbjct: 455 KELEKEDPENAGTYLLLSNIYASGRKWREASRVRLKMKEKGLKKQPGCSWIEVGNRVHVF 514
Query: 645 TVGDVSHPKTNAIYSVLAIFTGEL 668
D SH ++N IYS++ E+
Sbjct: 515 LARDKSHYQSNLIYSLVHDIHAEM 538
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 126/493 (25%), Positives = 223/493 (45%), Gaps = 56/493 (11%)
Query: 10 LICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKS 69
L V AIK +T T + + Y + + E+ +LF+ MP +NV SWNT+I K+
Sbjct: 28 LFDRVDAIKDVVTWTAMLSG-----YVRLKRIEEAERLFEVMPVKNVVSWNTMIDGYGKN 82
Query: 70 HDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVT 129
++ +A +F+ +++V++N+++ + G +A + F EM D V
Sbjct: 83 REVDKAIEVFERMHERNMVSWNAVIAALVQC-GRVEEARRRFDEMPKRD---------VI 132
Query: 130 STLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEE 189
S + + L G + + + + + ++++ Y+K +EA +FE E
Sbjct: 133 SWTTMVMGLARSGRVDEARKVFDRMP-ERNVVSWNAMVTGYAKNMRLDEAFDLFERMPER 191
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
NL S N M+ + GE+ A K F PE N VSW T+I+GYVQ G++E LK+FV
Sbjct: 192 -NLSSWNTMITGFIQNGELAWARKVFNEMPEKN-VVSWTTMITGYVQEGESESALKVFVE 249
Query: 250 M-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
M + G R NE TF + L AC + + +++H + K+ FV+S ++++Y KC
Sbjct: 250 MIKDGGARPNEGTFVNVLGACSDMAGLGEGQQVHLLISKSVYQDRTFVASALLNMYSKC- 308
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS--LTEKNVVVWTALFSGY 366
G + AR+ FD ++++++V+W + + Y
Sbjct: 309 ------------------------------GELSIARKIFDDVVISQRDLVLWNGMIAAY 338
Query: 367 VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR-MGVQM 425
C L E + G + + V LL AC+ + G + R +Q+
Sbjct: 339 AH-HGCGMEAIELFEDMQGLGFKPNDVSYVELLSACSHAGLVDEGLNYFDELGRDNSIQL 397
Query: 426 DKKLISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
+ + LVD+ + G + A + I Q + ++ ++A HG E L +E
Sbjct: 398 REDHHACLVDLCGRAGRLKEAYDFIKQLGTKASSSIWGGLLAGCNAHGDLEIGQLAAKE- 456
Query: 485 LEKGIKPDAVTFV 497
LEK +A T++
Sbjct: 457 LEKEDPENAGTYL 469
>gi|225454363|ref|XP_002276073.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
mitochondrial [Vitis vinifera]
Length = 673
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 177/607 (29%), Positives = 297/607 (48%), Gaps = 66/607 (10%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAE-GYEADALKLFIEMQSAD 118
N ++ +K + +FD P K++V++N+++CG + + L Q
Sbjct: 112 NQVLHVYVKCKEFNDVCKMFDEMPLKNVVSWNTLICGVVEGNCKFALVRLGFHYFRQMVL 171
Query: 119 EHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEE 178
E + + T+ L ++L +VG RQLH F++K+ D++ F S+L+D Y+K +E
Sbjct: 172 EMMAPNCITLNGLLRASIELNDVGICRQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDE 231
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
A F+ + D V WN ++S Y NG
Sbjct: 232 AQSAFDEVSSR---------------------------------DLVLWNVMVSCYALNG 258
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
+ +F M GV+ + TF S +++C L + K++H +++ + V+S
Sbjct: 259 VQGKAFGVFKLMRLEGVKGDNFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVAS 318
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
+VD+Y K EN+ E+AR+ FD + KN+V
Sbjct: 319 ALVDMYSKNENI-------------------------------EDARKAFDGMIVKNIVS 347
Query: 359 WTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
WT + GY + + + LL E + + D L L +L +C +A ++HAY+
Sbjct: 348 WTTMIVGYGQHGDGKEAMRLLQEMI-RVYTYPDELALASILSSCGNLSATSEVVQVHAYV 406
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
+ G + + + LV YSKCG++ A F + E D++ + ++ YA HG ++ +
Sbjct: 407 VENGFEAFLSIANALVSAYSKCGSIGSAFQSFSSVAEPDIISWTSLMGAYAFHGLSKEGV 466
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
+FE+ML ++PD V F+ +LSA H G V G YFN M Y+I P+++HY C+IDL
Sbjct: 467 EVFEKMLFSNVRPDKVAFLGVLSACAHGGFVLEGLHYFNLMINVYQIMPDSEHYTCIIDL 526
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARY 598
GRA L++AI + S+P E + LG+FL C+++RN LA A EKL +E N A Y
Sbjct: 527 LGRAGFLDEAINLLTSMPVEPRSDTLGAFLGACKVHRNVGLARWASEKLFVMEPNEPANY 586
Query: 599 VQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
++N+YA+ G+W ++ R+RK MR + GCSW+ + E+H F D +HP+ +Y
Sbjct: 587 SLMSNMYASVGHWFDVARVRKLMRERCDFKVPGCSWMEIAGEVHTFVSRDKTHPRAVQVY 646
Query: 659 SVLAIFT 665
+L +
Sbjct: 647 GMLDLLV 653
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 136/294 (46%), Gaps = 38/294 (12%)
Query: 260 HTFAS-ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLL 318
H+F+S AL L + K++H+ V+K G + + + ++ VY KC+ N
Sbjct: 73 HSFSSHALKISAKLGFLHGGKQLHAHVIKLGNCNLLSLQNQVLHVYVKCKEFN------- 125
Query: 319 LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE-ALFD 377
+ + FD + KNVV W L G V+ NC+ AL
Sbjct: 126 ------------------------DVCKMFDEMPLKNVVSWNTLICGVVEG-NCKFALVR 160
Query: 378 LLSEFVTK---EGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLV 434
L + + E + + + L LL A + +++H +IL+ G + + S LV
Sbjct: 161 LGFHYFRQMVLEMMAPNCITLNGLLRASIELNDVGICRQLHCFILKSGFDSNCFVGSALV 220
Query: 435 DMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAV 494
D Y+K G + A+ F RDLVL+NVM++CYA +G + KA +F+ M +G+K D
Sbjct: 221 DSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALNGVQGKAFGVFKLMRLEGVKGDNF 280
Query: 495 TFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
TF +++++ GS +G K + + + + ++D+Y + +E A
Sbjct: 281 TFTSMINSCGVLGSCGLG-KQVHGLIIRLSFDLDVLVASALVDMYSKNENIEDA 333
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 100/257 (38%), Gaps = 67/257 (26%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H I+ L + + L+ +YSK+ + ++RK FD M +N+ SW T
Sbjct: 302 HGLIIRLSFDLDVLVASALVDMYSKNENIEDARKAFDGMIVKNIVSWTT----------- 350
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
M+ GY G +A++L EM + DE + S L
Sbjct: 351 --------------------MIVGY-GQHGDGKEAMRLLQEMIRV--YTYPDELALASIL 387
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C L Q+HA++V+ +A ++L+ YSKC A + F E
Sbjct: 388 SSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSFSSVAEP--- 444
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
D +SW +L+ Y +G ++EG+++F +M
Sbjct: 445 ------------------------------DIISWTSLMGAYAFHGLSKEGVEVFEKMLF 474
Query: 253 NGVRWNEHTFASALSAC 269
+ VR ++ F LSAC
Sbjct: 475 SNVRPDKVAFLGVLSAC 491
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 203/671 (30%), Positives = 338/671 (50%), Gaps = 54/671 (8%)
Query: 30 QLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA----CIKSH-DLKQARSLFDSSPH 84
+L+ + SK + +R+ R+ + ++ S N +S C + H S+F SSP
Sbjct: 3 ELVALASKISNIRQLRQFHGHLVHNSLHSHNYWVSLLLINCTRLHAHPAYVDSIFTSSPS 62
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
D Y+ ML Y + G + LF S + +R F + L K G
Sbjct: 63 PDASVYSCML-KYYSRMGAHNQVVSLFKCTHSLN--LRPQPFVYIYLIKLAGK-----SG 114
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE---------------GC--- 186
HA+++K + F ++++DMY+K + A +FE GC
Sbjct: 115 NMFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKS 174
Query: 187 ---TEEV---------NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
TE V N+I+ +MV + G++E A + F PE VSWN + S Y
Sbjct: 175 GNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPE-RSVVSWNAMQSAY 233
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
Q +E L LF +M E G+ ++ T+ +S+C + + A I + + ++ N
Sbjct: 234 AQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNS 293
Query: 295 FVSSGIVDVYCKCENMNYAESML-LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
FV + ++D++ K N+ A ++ L RN+ + + MI Y+ G + AR FD++ +
Sbjct: 294 FVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPK 353
Query: 354 KNVVVWTALFSGYVKAQNCEAL--FDLLSEFVTKEGVVTDALILVILLGACALQAALHPG 411
++VV W ++ +GY AQN E+ +L E ++ + D + + +L AC AL
Sbjct: 354 RDVVSWNSMIAGY--AQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLS 411
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
+ + +++ ++L+ MYSKCG++ A IFQ RD+V +N +I+ +A +
Sbjct: 412 YWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAAN 471
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH 531
GH ++AI L M E+GI+PD VT++ +L+A H G + G+ F S+ A P DH
Sbjct: 472 GHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQA-----PTVDH 526
Query: 532 YACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLE 591
YACM+DL GRA +L++A ++S+P + A + GS LN R+++ L A KL LE
Sbjct: 527 YACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELE 586
Query: 592 GNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSH 651
N YV L+N+YA+ G W ++ R+R+ M+ + G SWV + ++H FTVGD SH
Sbjct: 587 PQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSH 646
Query: 652 PKTNAIYSVLA 662
++ IY +LA
Sbjct: 647 EQSKDIYKLLA 657
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 139/578 (24%), Positives = 253/578 (43%), Gaps = 115/578 (19%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKS--- 69
H +K G N ++ +Y+K+ + +R LF++M ER + WN++IS C KS
Sbjct: 118 HAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNE 177
Query: 70 ----------------------------HDLKQARSLFDSSPHKDLVTYNSMLCGYINAE 101
DL+ AR FD P + +V++N+M Y E
Sbjct: 178 TEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKE 237
Query: 102 GYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGF 161
+AL LF +M +E I D+ T T++ C + + + + + + F
Sbjct: 238 -CPKEALNLFHQM--LEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSF 294
Query: 162 AVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPEL 221
++L+DM++K E A +F+ + N ++ N M++A R G++ +A + F P+
Sbjct: 295 VKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPK- 353
Query: 222 NDAVSWNTLISGYVQNGDAEEGLKLFVRMGE-NGVRWNEHTFASALSACCGLRNVKCAKE 280
D VSWN++I+GY QNG++ ++LF M ++ +E T AS LSAC + +K
Sbjct: 354 RDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALK---- 409
Query: 281 IHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGN 340
+ WVL ++ + GI +S+I YS G+
Sbjct: 410 LSYWVLD--IVREKNIKLGIS-------------------------GFNSLIFMYSKCGS 442
Query: 341 MEEARRHFDSLTEKNVVVWTALFSGY-VKAQNCEALFDLLSEFVTKEGVVTDALILVILL 399
+ +A R F ++ ++VV + L SG+ EA+ +L+ + +EG+ D + + +L
Sbjct: 443 VADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLT--MEEEGIEPDHVTYIGVL 500
Query: 400 GACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLV 459
AC+ HA +L G + K + + VD Y+
Sbjct: 501 TACS-----------HAGLLNEGKNVFKSIQAPTVDHYA--------------------- 528
Query: 460 LYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSM 519
M+ G ++A +L + M +KP A + ++L+A R V +GE + +
Sbjct: 529 ---CMVDLLGRAGELDEAKMLIQSM---PMKPHAGVYGSLLNASRIHKRVGLGELAASKL 582
Query: 520 TADYKISPET-DHYACMIDLY---GRANQLEKAIEFMK 553
+++ P+ +Y + ++Y GR +++ E MK
Sbjct: 583 ---FELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMK 617
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 196/586 (33%), Positives = 301/586 (51%), Gaps = 70/586 (11%)
Query: 87 LVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQ 146
+ YN +C + G A++L + D +R T S L LC L ++ GR+
Sbjct: 68 ITDYNIEICRFCEL-GNLRRAMELINQSPKPDLELR----TYCSVLQLCADLKSIQDGRR 122
Query: 147 LHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREG 206
+H+ + + G S L+ MY C E R+F+ E
Sbjct: 123 IHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANE----------------- 165
Query: 207 EMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASAL 266
K F WN L++GY + G+ E L LF RM E G+R E A L
Sbjct: 166 ------KVFL----------WNLLMNGYAKIGNFRESLSLFKRMRELGIRRVES--ARKL 207
Query: 267 SACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSF 326
G R+V SW N +IS +VS+G+ + + ++ E MLLL G+
Sbjct: 208 FDELGDRDVI------SW---NSMISG-YVSNGLSE-----KGLDLFEQMLLL-GINTDL 251
Query: 327 SI---------SSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFD 377
+ + ++ YS GN+ A + F+++ E++VV WT++ +GY + +
Sbjct: 252 ATMVSVELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVR 311
Query: 378 LLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMY 437
L E + KE + +++ + +L ACA AAL G+EIH +ILR G +D+ + + LVDMY
Sbjct: 312 LFHE-MEKEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMY 370
Query: 438 SKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFV 497
KCG + A ++F E+DLV + VMIA Y HG+ +AI F EM GI+PD V+F+
Sbjct: 371 LKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFI 430
Query: 498 AILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPT 557
+IL A H G ++ G +FN M + I P+++HYAC++DL RA L KA +F+K +P
Sbjct: 431 SILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPI 490
Query: 558 EEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRI 617
E DA I G+ L CR+ + +LA + E + LE N YV LAN+YA W E+ ++
Sbjct: 491 EPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKL 550
Query: 618 RKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
R+++ RG++ N GCSW+ ++ ++HIF GD SHP N I +L
Sbjct: 551 RERIGRRGLRKN--PGCSWIEIKGKVHIFVTGDSSHPLANKIELLL 594
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 121/554 (21%), Positives = 213/554 (38%), Gaps = 160/554 (28%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQ----------- 74
+ ++L+ +Y LRE R++FD++ VF WN +++ K + ++
Sbjct: 137 VLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMREL 196
Query: 75 -------ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFT 127
AR LFD +D++++NSM+ GY+ + G L LF +M I D T
Sbjct: 197 GIRRVESARKLFDELGDRDVISWNSMISGYV-SNGLSEKGLDLFEQMLLLG--INTDLAT 253
Query: 128 VTS---TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
+ S TLN C L+DMYSK A +VFE
Sbjct: 254 MVSVELTLNNC------------------------------LLDMYSKSGNLNSAIQVFE 283
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
E +++S +M+A REG +M+ +
Sbjct: 284 TMGER-SVVSWTSMIAGYAREGLSDMS--------------------------------V 310
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
+LF M + + N T A L AC L ++ +EIH +L+NG + V++ +VD+Y
Sbjct: 311 RLFHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMY 370
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
KC + A + + ++ S + MI GY + G EA F+ +
Sbjct: 371 LKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEM------------- 417
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
G+ D + + +L AC+ L G ++R
Sbjct: 418 -------------------RNSGIEPDEVSFISILYACSHSGLLDEGWGFFN-MMRNNCC 457
Query: 425 MDKKL--ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
++ K + +VD+ ++ GN++ A F
Sbjct: 458 IEPKSEHYACIVDLLARAGNLSKA--------------------------------YKFI 485
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE-TDHYACMIDLYGR 541
+M+ I+PDA + A+L R V++ EK + +++ PE T +Y + ++Y
Sbjct: 486 KMMP--IEPDATIWGALLCGCRIYHDVKLAEKVAEHV---FELEPENTGYYVLLANIYAE 540
Query: 542 ANQLEKAIEFMKSI 555
A + E+ + + I
Sbjct: 541 AEKWEEVKKLRERI 554
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 23/219 (10%)
Query: 54 RNVFSW-----NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADAL 108
RN FS N ++ +K L AR LFD P KDLV++ M+ GY GY ++A+
Sbjct: 353 RNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGY-GMHGYGSEAI 411
Query: 109 KLFIEMQSADEHIRMDEFTVTSTLNLCVK--LLNVGFGRQLHAFMVKTSN---DASGFAV 163
F EM+++ I DE + S L C LL+ G+G F + +N +
Sbjct: 412 AAFNEMRNSG--IEPDEVSFISILYACSHSGLLDEGWG----FFNMMRNNCCIEPKSEHY 465
Query: 164 SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALK----TFWRQP 219
+ ++D+ ++ +A + + E + A++ C ++++A K F +P
Sbjct: 466 ACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEP 525
Query: 220 ELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWN 258
E + + L + Y + EE KL R+G G+R N
Sbjct: 526 E--NTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKN 562
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 182/544 (33%), Positives = 284/544 (52%), Gaps = 36/544 (6%)
Query: 130 STLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEE 189
+ L C+K + G+Q+HA +KTS + + L+DMY+KC +A +VF+
Sbjct: 124 TLLKFCLKQRALKEGKQVHAH-IKTSGSIGLYISNRLLDMYAKCGSLVDAEKVFDEMVHR 182
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
+L S N M++ + G E A F + P D SW +ISG VQ+ EE L+L+
Sbjct: 183 -DLCSWNIMISGYVKGGNFEKARNLFDKMPN-RDNFSWTAIISGCVQHNRPEEALELYRL 240
Query: 250 MGENGV-RWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
M ++ + N+ T +SAL+A + ++ K+IH +++ GL S+ V ++D+Y KC
Sbjct: 241 MQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKC- 299
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
G++EEAR FD + E++VV WT + Y+K
Sbjct: 300 ------------------------------GSIEEARYIFDKMEERDVVSWTTMIHTYLK 329
Query: 369 AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK 428
E F L + ++ + +L ACA AA GK+IHAY++R+G
Sbjct: 330 NGRREEGFALFRHLMN-SNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSS 388
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
S LV MYSKCG++ A+ +F+ + DL + ++ YA HG +KA+ FE +L+ G
Sbjct: 389 AASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSG 448
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
KPD + F+ +LSA H G V+ G +YF+S+ + ++ DHYAC+IDL RA Q +A
Sbjct: 449 TKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEA 508
Query: 549 IEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAE 608
+ +P + D I + L CR++ N ELA A + L +E N A YV LAN+YA+
Sbjct: 509 ESIINEMPIKPDKYIWAALLGGCRIHGNLELAKRAAKSLFEIEPENPATYVTLANIYASA 568
Query: 609 GNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
G AE IR+ M + G SW+ + E+H+F+VGD SHPK+ I L+ + +
Sbjct: 569 GMRAEEANIRETMDSRGIVKKPGMSWIEIRREVHVFSVGDNSHPKSKEILEYLSELSKRM 628
Query: 669 YEIA 672
E+
Sbjct: 629 KEVG 632
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 134/544 (24%), Positives = 240/544 (44%), Gaps = 107/544 (19%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
++ LKE H IK ++ +N+L+ +Y+K L ++ K+FDEM R++ SWN
Sbjct: 130 LKQRALKEGKQVHAH-IKTSGSIGLYISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWN 188
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
+IS +K + ++AR+LFD P++D ++ +++ G + E +AL+L+ MQ D +
Sbjct: 189 IMISGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPE-EALELYRLMQKHD-Y 246
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
+ ++ T++S L + ++ G+++H +++ D+ SL+DMY KC EEA
Sbjct: 247 SKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEAR 306
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+F+ E D VSW T+I Y++NG
Sbjct: 307 YIFDKMEER---------------------------------DVVSWTTMIHTYLKNGRR 333
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
EEG LF + + + N+ TFA L+AC L K+IH+++++ G S +S +
Sbjct: 334 EEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASAL 393
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
V +Y KC ++ A+S+ + + FS +S++VGY+ G ++A F
Sbjct: 394 VHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFF------------ 441
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE-IHAYIL 419
E + K G D + + +L ACA + G E H+
Sbjct: 442 --------------------ELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKE 481
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
+ G+ + ++D+ ++ G T AE I
Sbjct: 482 KHGLTRTIDHYACIIDLLARAGQFTEAESIIN---------------------------- 513
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD-HYACMIDL 538
E IKPD + A+L R G++E+ ++ S+ ++I PE Y + ++
Sbjct: 514 ------EMPIKPDKYIWAALLGGCRIHGNLELAKRAAKSL---FEIEPENPATYVTLANI 564
Query: 539 YGRA 542
Y A
Sbjct: 565 YASA 568
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 73/136 (53%), Gaps = 6/136 (4%)
Query: 392 ALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQ 451
A I + LL C Q AL GK++HA+I G + + + L+DMY+KCG++ AE +F
Sbjct: 119 ASIYLTLLKFCLKQRALKEGKQVHAHIKTSG-SIGLYISNRLLDMYAKCGSLVDAEKVFD 177
Query: 452 NFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA-FRHCGSVE 510
+ RDL +N+MI+ Y G+ EKA LF++M + D ++ AI+S +H E
Sbjct: 178 EMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNR----DNFSWTAIISGCVQHNRPEE 233
Query: 511 MGEKYFNSMTADYKIS 526
E Y DY S
Sbjct: 234 ALELYRLMQKHDYSKS 249
>gi|222629201|gb|EEE61333.1| hypothetical protein OsJ_15451 [Oryza sativa Japonica Group]
Length = 1037
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 208/691 (30%), Positives = 332/691 (48%), Gaps = 118/691 (17%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
+ NVF +++I+ K A+++FD S K++V +N+ML G++ E E +A+++F
Sbjct: 367 DANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPE-EAIRMFQ 425
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
M ++ DEFT S L C L + G+Q+H +K D S F ++ +DMYSK
Sbjct: 426 YMMRYT--LQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSK 483
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
+A +F +LI D++SWN L
Sbjct: 484 YGAIGDAKALF-------SLI--------------------------PYKDSISWNALTV 510
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
G QN + EE + + RM +G+ ++ +F++A++AC +R + K+IH +K G+ S
Sbjct: 511 GLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICS 570
Query: 293 NPFVSSGIVDVYCK-----------------------------CENMNYAESMLLLKGV- 322
N V S ++D+Y K +N N E++ L + V
Sbjct: 571 NHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVL 630
Query: 323 -----RNSFSISSMIVG---------------YSLQGN---------------------M 341
+S + SS++ G Y+L+ +
Sbjct: 631 KDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKML 690
Query: 342 EEARRHFDSLTE-KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKE-GVVTDALILVILL 399
E+A + + + KN+ WTA+ SGY AQN L+S + + V +D +L
Sbjct: 691 EDANKLLTEMPDHKNLFEWTAIISGY--AQNGYGDHSLVSFWRMRHCNVRSDEATFASVL 748
Query: 400 GACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIE---- 455
AC+ A GKEIH I + G + S L+DMYSKCG++ + F+ F E
Sbjct: 749 KACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISS---FEAFKELKNK 805
Query: 456 RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKY 515
+D++ +N MI +A +G+ ++A+LLF++M E IKPD VTF+ +L A H G + G +
Sbjct: 806 QDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHF 865
Query: 516 FNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNR 575
F SM Y ++P DHYAC IDL GR L++A E + +P D V+ ++L CR+++
Sbjct: 866 FGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHK 925
Query: 576 NAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWV 635
+ E A KL+ LE + YV L++++AA GNWAE R+ MR +F GCSW+
Sbjct: 926 DEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWI 985
Query: 636 YVEHEIHIFTVGDVSHPKTNAIYSVLAIFTG 666
V ++ +F V D HP IY +L TG
Sbjct: 986 TVGNKTSLFLVQDKYHPDNLRIYEMLGDLTG 1016
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/468 (25%), Positives = 214/468 (45%), Gaps = 68/468 (14%)
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
R D+F + L+ C ++ + +GRQ+H +VK+ +S F ++L+DMY+KC A R
Sbjct: 165 RPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARR 224
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDA----------------- 224
VF+G + I ++M+A R G + AL F R ++ A
Sbjct: 225 VFDGIACP-DTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSG 283
Query: 225 -----------------VSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALS 267
V+WN +ISG+ Q+G L L+ M G+ TFAS LS
Sbjct: 284 RLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLS 343
Query: 268 ACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFS 327
A ++ +++H+ + +GL +N FV S ++++Y KC
Sbjct: 344 AAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKC-------------------- 383
Query: 328 ISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEG 387
G +A+ FD EKN+V+W A+ +G+V+ + E + +++ +
Sbjct: 384 -----------GCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMF-QYMMRYT 431
Query: 388 VVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAE 447
+ TD V +LGAC ++ + GK++H ++ + + + + +DMYSK G + A+
Sbjct: 432 LQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAK 491
Query: 448 IIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCG 507
+F +D + +N + A + EE+A+ + + M GI PD V+F ++A +
Sbjct: 492 ALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIR 551
Query: 508 SVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSI 555
+ E G K + + Y I + +IDLY + +E + + +
Sbjct: 552 ATETG-KQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQV 598
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 138/594 (23%), Positives = 254/594 (42%), Gaps = 125/594 (21%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN------------ 60
H +K+G + + L+ +Y+K + +R++FD + + W+
Sbjct: 191 HCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCY 250
Query: 61 -----------------------TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGY 97
TIIS S L A +L P V +N+++ G+
Sbjct: 251 QEALALFSRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGH 310
Query: 98 INAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSND 157
+ G E + L L+ +M+S + T S L+ + G+Q+HA V D
Sbjct: 311 AQS-GLEFNVLGLYKDMRSWG--LWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLD 367
Query: 158 ASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWR 217
A+ F SSLI++Y+KC C +A VF+ E+
Sbjct: 368 ANVFVGSSLINLYAKCGCPSDAKNVFDLSCEK---------------------------- 399
Query: 218 QPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKC 277
+ V WN +++G+VQN EE +++F M ++ +E TF S L AC L +
Sbjct: 400 -----NIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYL 454
Query: 278 AKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSL 337
K++H +KN + + FV++ +D+Y K + A+++ L ++S S +++ VG L
Sbjct: 455 GKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVG--L 512
Query: 338 QGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVI 397
N+EE E+ V + + G+ D +
Sbjct: 513 AQNLEE---------EEAVCMLKRM---------------------RLHGITPDDVSFST 542
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD 457
+ AC+ A GK+IH ++ G+ + + S+L+D+YSK G++ + IF
Sbjct: 543 AINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASS 602
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR-----------HC 506
+V N +IA + + +E++AI LF+++L+ G+KP +VTF +ILS HC
Sbjct: 603 IVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHC 662
Query: 507 GSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEED 560
+++ G Y +++ + +Y ++ LE A + + +P ++
Sbjct: 663 YTLKSGVLYDDTLLG-----------VSLAGIYLKSKMLEDANKLLTEMPDHKN 705
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 166/374 (44%), Gaps = 47/374 (12%)
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
R+ G + + + +++V C+ G + A E + ++L+S + ++G
Sbjct: 91 RILRGGSPLLGRLG-DSLVELYCKSGRVGYAWSALGYAGERASGAA-SSLLSCHARSGSP 148
Query: 241 EEGLKLF--VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
+ L F +R G R ++ A LSAC + + +++H V+K+G S+ F +
Sbjct: 149 GDVLGAFRYIRCTAGG-RPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEA 207
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE----- 353
+VD+Y KC ++ A + ++ SSMI Y G +EA F + +
Sbjct: 208 ALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAP 267
Query: 354 ------------------------------KNVVVWTALFSGYVKAQ---NCEALFDLLS 380
+ V W A+ SG+ ++ N L+ +
Sbjct: 268 DQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMR 327
Query: 381 EFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC 440
+ G+ +L A A A G+++HA + G+ + + S+L+++Y+KC
Sbjct: 328 SW----GLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKC 383
Query: 441 GNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAIL 500
G + A+ +F E+++V++N M+ + + E+AI +F+ M+ ++ D TFV+IL
Sbjct: 384 GCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSIL 443
Query: 501 SAFRHCGSVEMGEK 514
A + S +G++
Sbjct: 444 GACTYLSSFYLGKQ 457
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 108/268 (40%), Gaps = 66/268 (24%)
Query: 3 SLNLKEALICHVQAIKAG-LTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
SLN H +K+G L T+ L IY K +L ++ KL EMP+
Sbjct: 651 SLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPD-------- 702
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
HK+L + +++ GY GY +L F M+ + +
Sbjct: 703 ----------------------HKNLFEWTAIISGYAQ-NGYGDHSLVSFWRMRHCN--V 737
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
R DE T S L C + G+++H + K+ + A S+LIDMYSKC
Sbjct: 738 RSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKC-------- 789
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
G++ + + F D + WN++I G+ +NG A+
Sbjct: 790 ------------------------GDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYAD 825
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSAC 269
E L LF +M E ++ +E TF L AC
Sbjct: 826 EALLLFQKMEELQIKPDEVTFLGVLIAC 853
Score = 42.7 bits (99), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 58/145 (40%), Gaps = 2/145 (1%)
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
+ +H ILR G + +L +LV++Y K G + YA ER + +++C+A
Sbjct: 86 RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 145
Query: 472 GHEEKAILLFEEM-LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD 530
G + F + G +PD +LSA G + G + + S
Sbjct: 146 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKS-GFSSSVF 204
Query: 531 HYACMIDLYGRANQLEKAIEFMKSI 555
A ++D+Y + + A I
Sbjct: 205 CEAALVDMYAKCGDVPNARRVFDGI 229
>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
Length = 837
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 198/646 (30%), Positives = 325/646 (50%), Gaps = 90/646 (13%)
Query: 32 IHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYN 91
IH Y +LR K+ +V ++N +I K +K ++LFD K+++++
Sbjct: 265 IHAY----VLRSETKM-------DVSTYNVLIDFYTKCGRVKAGKALFDRLDVKNIISWT 313
Query: 92 SMLCGYINAEGYEADALKLFIEMQSADEHIRM----DEFTVTSTLNLCVKLLNVGFGRQL 147
+M+ GY+ Y+ +A++L EM RM DE+ +S L C + + GRQ+
Sbjct: 314 TMIAGYMQ-NSYDWEAVELVGEM------FRMGWKPDEYACSSVLTSCGSVDALQHGRQI 366
Query: 148 HAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGE 207
H++++K + F ++LIDMYSKC ++A RVF+ V C
Sbjct: 367 HSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFD--------------VVTC----- 407
Query: 208 MEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALS 267
+ V +N +I GY + G L++F M V + TF S L
Sbjct: 408 --------------HSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLG 453
Query: 268 ACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFS 327
L ++ +K+IH ++K G + F SS ++DVY KC +
Sbjct: 454 LSAALLCLQLSKQIHGLIIKYGFSLDKFTSSALIDVYSKCSCI----------------- 496
Query: 328 ISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF-VTKE 386
+AR F+ T K++VVW +LFSGY E F L S+ +++E
Sbjct: 497 --------------RDARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEAFKLYSDLQLSRE 542
Query: 387 GVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYA 446
+ L A ++ A+L G++ H +++MG++ D + + LVDMY+KCG++ A
Sbjct: 543 R--PNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITNALVDMYAKCGSVEEA 600
Query: 447 EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHC 506
E IF + + +D +N MI+ YA HG E+A+ +FE M+ I P+ VTFV++LSA H
Sbjct: 601 EKIFSSSVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNINPNYVTFVSVLSACSHV 660
Query: 507 GSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGS 566
G VE G +++NSM A Y I P +HYA ++ L GRA +L +A EF++ + A++ S
Sbjct: 661 GFVEDGLQHYNSM-ARYGIEPGIEHYASVVTLLGRAGRLTEAREFIEKMTIRPAALVWRS 719
Query: 567 FLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKG 626
L+ CR+ N ELA A E + ++ + YV L+N++A++G W ++ R+R +M
Sbjct: 720 LLSACRVFGNVELAKHAAEMAISIDPMDSGSYVMLSNIFASKGMWGDVKRLRLKMDVNGV 779
Query: 627 NRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
+ G SW+ V E+HIF D H +T+ IY L T ++ ++
Sbjct: 780 VKEPGQSWIEVNGEVHIFVSRDKVHDETDLIYLALDELTTQMKDVG 825
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 137/568 (24%), Positives = 253/568 (44%), Gaps = 100/568 (17%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H Q + GL +N L+H Y K + ++ LFD+MP RN+ SW++++S
Sbjct: 63 HCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVVS-------- 114
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
Y + GY AL F+E Q +++E+ + S +
Sbjct: 115 ----------------MYTQL--------GYNEKALLYFLEFQRTCVD-KLNEYILASII 149
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
CV+ G Q+H++++K+ + +SL+ +Y+K ++A VF+G
Sbjct: 150 RACVQRDGGEPGSQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDG------- 202
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+ LKT V+W +I+GY ++G +E L+LF M E
Sbjct: 203 -----------------LVLKT---------PVTWTAIITGYTKSGRSEVSLQLFNLMME 236
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+ V +++ +S L+AC L +K K+IH++VL++ + + ++D Y KC +
Sbjct: 237 SNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKA 296
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
+++ V+N S ++MI GY +N W A+
Sbjct: 297 GKALFDRLDVKNIISWTTMIAGYM-----------------QNSYDWEAV---------- 329
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
+L+ E + G D +L +C AL G++IH+Y++++ ++ D + +
Sbjct: 330 ----ELVGEMF-RMGWKPDEYACSSVLTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTNA 384
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
L+DMYSKC + A+ +F +V YN MI Y+ G+ A+ +F+EM K + P
Sbjct: 385 LIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPS 444
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
+TFV++L +++ K + + Y S + + +ID+Y + + + A ++
Sbjct: 445 FLTFVSLLGLSAALLCLQL-SKQIHGLIIKYGFSLDKFTSSALIDVYSKCSCIRDA-RYV 502
Query: 553 KSIPTEEDAVILGSFLNVCRLNRNAELA 580
T +D V+ S + L +E A
Sbjct: 503 FEGTTNKDIVVWNSLFSGYNLQLKSEEA 530
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 112/257 (43%), Gaps = 67/257 (26%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H IK G +L T++ LI +YSK + +R++R +F+ +++ WN++ S
Sbjct: 468 HGLIIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFS-------- 519
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
GY N + +A KL+ ++Q + E R +EFT +
Sbjct: 520 -----------------------GY-NLQLKSEEAFKLYSDLQLSRE--RPNEFTFAALT 553
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
L ++ G+Q H ++K ++ F ++L+DMY+KC EEA ++F
Sbjct: 554 TAASILASLPHGQQFHNQVMKMGLESDPFITNALVDMYAKCGSVEEAEKIFSS------- 606
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+ W+ D WN++IS Y Q+G EE L++F M
Sbjct: 607 ---------------------SVWK-----DTACWNSMISMYAQHGKVEEALRMFETMVS 640
Query: 253 NGVRWNEHTFASALSAC 269
N + N TF S LSAC
Sbjct: 641 NNINPNYVTFVSVLSAC 657
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 154/366 (42%), Gaps = 75/366 (20%)
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
V+ A+ L A +++ +++H V+ GL + F+S+ ++ Y K ++ A
Sbjct: 36 VKVKGRALANLLLAPVSNKSILYYRKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAG 95
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHF--------DSLTE------------- 353
++ RN S SS++ Y+ G E+A +F D L E
Sbjct: 96 TLFDKMPNRNLVSWSSVVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQR 155
Query: 354 -------------------KNVVVWTALFSGYVK---AQNCEALFD--LLSEFVTKEGVV 389
++V V T+L Y K +FD +L VT ++
Sbjct: 156 DGGEPGSQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAII 215
Query: 390 T-------------------------DALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
T D +L +L AC++ L GK+IHAY+LR +
Sbjct: 216 TGYTKSGRSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETK 275
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
MD + L+D Y+KCG + + +F ++++ + MIA Y + ++ +A+ L EM
Sbjct: 276 MDVSTYNVLIDFYTKCGRVKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEM 335
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA--CMIDLYGRA 542
G KPD ++L++ CGSV+ + + K+ E D++ +ID+Y +
Sbjct: 336 FRMGWKPDEYACSSVLTS---CGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKC 392
Query: 543 NQLEKA 548
N L+ A
Sbjct: 393 NALDDA 398
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 86/194 (44%), Gaps = 9/194 (4%)
Query: 378 LLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMY 437
+L F ++ V + +LL + ++ L+ +++H ++ G+Q D L + L+ Y
Sbjct: 27 MLPSFSSQNVKVKGRALANLLLAPVSNKSILYY-RKVHCQVVLWGLQYDVFLSNLLLHSY 85
Query: 438 SKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFV 497
K G++ A +F R+LV ++ +++ Y G+ EKA+L F E + D +
Sbjct: 86 FKIGSVFDAGTLFDKMPNRNLVSWSSVVSMYTQLGYNEKALLYFLEFQRTCV--DKLNEY 143
Query: 498 AILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY--ACMIDLYGRANQLEKAIEFMKSI 555
+ S R C + GE + K D Y ++ LY + +++KA +
Sbjct: 144 ILASIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGL 203
Query: 556 ----PTEEDAVILG 565
P A+I G
Sbjct: 204 VLKTPVTWTAIITG 217
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 56/108 (51%), Gaps = 9/108 (8%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H Q +K GL TN L+ +Y+K + E+ K+F ++ WN++IS + +
Sbjct: 569 HNQVMKMGLESDPFITNALVDMYAKCGSVEEAEKIFSSSVWKDTACWNSMISMYAQHGKV 628
Query: 73 KQARSLFDS----SPHKDLVTYNSML--CGYINAEGYEADALKLFIEM 114
++A +F++ + + + VT+ S+L C ++ G+ D L+ + M
Sbjct: 629 EEALRMFETMVSNNINPNYVTFVSVLSACSHV---GFVEDGLQHYNSM 673
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 184/615 (29%), Positives = 309/615 (50%), Gaps = 72/615 (11%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLC--GYINAEGYEADALKLFIEMQSA 117
+++ +K D++ A +F+SS ++V +N ML G IN A + +LF +MQ+A
Sbjct: 283 GSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDL---AKSFELFCQMQAA 339
Query: 118 DEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYE 177
IR ++FT L C + G Q+H+ VKT ++ + LIDMYSK E
Sbjct: 340 G--IRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLE 397
Query: 178 EACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQN 237
+A RV E E+ D VSW ++I+GYVQ+
Sbjct: 398 KARRVLEMLKEK---------------------------------DVVSWTSMIAGYVQH 424
Query: 238 GDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVS 297
++ L F M + G+ + ASA+S C G+ ++ +IH+ + +G + +
Sbjct: 425 ECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIW 484
Query: 298 SGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVV 357
+ +V++Y +C G + EA F+ + K+ +
Sbjct: 485 NALVNLYARC-------------------------------GRIREAFSSFEEMELKDGI 513
Query: 358 VWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
L SG+ ++ E + + + GV + V L A A A + GK+IHA
Sbjct: 514 TGNGLVSGFAQSGLHEEALKVFMR-MDQSGVKHNVFTFVSALSASANLAEIKQGKQIHAR 572
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
+++ G + ++ + L+ +Y KCG+ A++ F ER+ V +N +I + HG +A
Sbjct: 573 VIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEA 632
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID 537
+ LF++M ++GIKP+ VTF+ +L+A H G VE G YF SM+ +Y I P DHYAC+ID
Sbjct: 633 LDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVID 692
Query: 538 LYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKAR 597
++GRA QL++A +F++ +P DA++ + L+ C++++N E+ A + LL LE ++ A
Sbjct: 693 IFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSAS 752
Query: 598 YVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
YV L+N YA WA ++RK MR + G SW+ V++ +H F VGD HP I
Sbjct: 753 YVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQI 812
Query: 658 YSVLAIFTGELYEIA 672
Y+ LA+ + ++
Sbjct: 813 YNFLAVINDRVAKVG 827
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 127/542 (23%), Positives = 228/542 (42%), Gaps = 110/542 (20%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +A+ GL I N LI +YSK+ L+ +R++F+E+ R
Sbjct: 65 HAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSAR------------------ 106
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
D V++ +ML GY G +AL L+ +M A + + ++S L
Sbjct: 107 -------------DNVSWVAMLSGYAQ-NGLGEEALGLYRQMHRAG--VVPTPYVLSSVL 150
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C K GR +HA K + F +++I +Y +C
Sbjct: 151 SSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRC------------------- 191
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
G +A + F P D V++NTLISG+ Q G E L++F M
Sbjct: 192 -------------GSFRLAERVFCDMPH-RDTVTFNTLISGHAQCGHGEHALEIFEEMQF 237
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+G+ + T +S L+AC L +++ ++HS++ K G+ S+ + ++D+Y KC
Sbjct: 238 SGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKC----- 292
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G++E A F+S NVV+W + + + +
Sbjct: 293 --------------------------GDVETALVIFNSSDRTNVVLWNLMLVAFGQINDL 326
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
F+L + + G+ + +L C + G++IH+ ++ G + D +
Sbjct: 327 AKSFELFCQ-MQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGV 385
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
L+DMYSK G + A + + E+D+V + MIA Y H + A+ F+EM + GI PD
Sbjct: 386 LIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPD 445
Query: 493 AVTFVAILSAFRHCGSVEMGEK-----YFNSMTADYKISPETDHYACMIDLYGRANQLEK 547
+ + +S ++ G + Y + + D I + +++LY R ++ +
Sbjct: 446 NIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSI------WNALVNLYARCGRIRE 499
Query: 548 AI 549
A
Sbjct: 500 AF 501
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 174/375 (46%), Gaps = 48/375 (12%)
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
++L SKN +V + + + + D VSW ++SGY QNG EE L L+ +
Sbjct: 84 IDLYSKNGLV----------LPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQ 133
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
M GV + +S LS+C + IH+ K+G S FV + ++ +Y +C
Sbjct: 134 MHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRC-- 191
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
G+ A R F + ++ V + L SG+ +
Sbjct: 192 -----------------------------GSFRLAERVFCDMPHRDTVTFNTLISGHAQC 222
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
+ E ++ E + G+ D + + LL ACA L G ++H+Y+ + G+ D +
Sbjct: 223 GHGEHALEIFEE-MQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIM 281
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+L+D+Y KCG++ A +IF + ++VL+N+M+ + K+ LF +M GI
Sbjct: 282 EGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGI 341
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY--ACMIDLYGRANQLEK 547
+P+ T+ IL +++GE+ +S++ K E+D Y +ID+Y + LEK
Sbjct: 342 RPNQFTYPCILRTCTCTREIDLGEQ-IHSLSV--KTGFESDMYVSGVLIDMYSKYGWLEK 398
Query: 548 AIEFMKSIPTEEDAV 562
A ++ + E+D V
Sbjct: 399 ARRVLEML-KEKDVV 412
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 123/511 (24%), Positives = 225/511 (44%), Gaps = 118/511 (23%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R ++L E + H ++K G + LI +YSK+ L ++R++ + + E
Sbjct: 359 REIDLGEQI--HSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKE-------- 408
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
KD+V++ SM+ GY+ E + DAL F EMQ I
Sbjct: 409 -----------------------KDVVSWTSMIAGYVQHECCK-DALAAFKEMQKCG--I 442
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHA--FMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
D + S ++ C + + G Q+HA ++ S D S + ++L+++Y++C EA
Sbjct: 443 WPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIW--NALVNLYARCGRIREA 500
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
FE EM EL D ++ N L+SG+ Q+G
Sbjct: 501 FSSFE------------------------EM---------ELKDGITGNGLVSGFAQSGL 527
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
EE LK+F+RM ++GV+ N TF SALSA L +K K+IH+ V+K G V +
Sbjct: 528 HEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNA 587
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
++ +Y KC G+ E+A+ F ++E+N V W
Sbjct: 588 LISLYGKC-------------------------------GSFEDAKMEFSEMSERNEVSW 616
Query: 360 TALFSGYVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
+ + + + EAL DL + + KEG+ + + + +L AC+ + G +Y
Sbjct: 617 NTIITSCSQHGRGLEAL-DLFDQ-MKKEGIKPNDVTFIGVLAACSHVGLVEEGL---SYF 671
Query: 419 LRM----GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGH 473
M G++ + ++D++ + G + A+ + I D +++ +++ H +
Sbjct: 672 KSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKN 731
Query: 474 EEKAILLFEEMLEKGIKP-DAVTFVAILSAF 503
E + +LE ++P D+ ++V + +A+
Sbjct: 732 IEVGEFAAKHLLE--LEPHDSASYVLLSNAY 760
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 145/332 (43%), Gaps = 34/332 (10%)
Query: 224 AVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCG-LRNVKCAKEIH 282
A S ++G++ + D + L LF FA AL AC G R + EIH
Sbjct: 6 AASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIH 65
Query: 283 SWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNME 342
+ + GL V + ++D+Y K G +
Sbjct: 66 AKAVTRGLGKYRIVGNLLIDLYSK-------------------------------NGLVL 94
Query: 343 EARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGAC 402
ARR F+ L+ ++ V W A+ SGY + E L + + + GVV +L +L +C
Sbjct: 95 PARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQ-MHRAGVVPTPYVLSSVLSSC 153
Query: 403 ALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYN 462
G+ IHA + G + + + ++ +Y +CG+ AE +F + RD V +N
Sbjct: 154 TKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFN 213
Query: 463 VMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTAD 522
+I+ +A GH E A+ +FEEM G+ PD VT ++L+A G ++ G + +S
Sbjct: 214 TLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQ-LHSYLFK 272
Query: 523 YKISPETDHYACMIDLYGRANQLEKAIEFMKS 554
IS + ++DLY + +E A+ S
Sbjct: 273 AGISSDYIMEGSLLDLYVKCGDVETALVIFNS 304
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 182/589 (30%), Positives = 294/589 (49%), Gaps = 69/589 (11%)
Query: 72 LKQARSLFDSSPHKDLVT--YNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVT 129
L A SLF P L T YN ++ ++A G+ DAL LF+EM + D+ TV
Sbjct: 66 LPYAVSLFRLGPRPPLSTPCYNVLMRALLHA-GHPEDALHLFVEMLDV-ASVCPDQHTVA 123
Query: 130 STLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEE 189
L C ++ + GR + A+ VK A F +SSLI MY+ CR A +F+ E
Sbjct: 124 CALKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEE- 182
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
N V WN +I+ Y++NG+ E +++F
Sbjct: 183 --------------------------------NGVVMWNAIITAYMKNGNWMEVVEMFKG 210
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
M E GV ++E T S ++AC + + K K + +V + GL+ N + + ++D+Y KC
Sbjct: 211 MLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKC-- 268
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
G + +ARR FD + ++VV W+A+ SGY +A
Sbjct: 269 -----------------------------GELGKARRLFDGMQSRDVVAWSAMISGYTQA 299
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
C L SE E V + + +V +L ACA+ AL GK +H+YI R + + L
Sbjct: 300 DQCREALALFSEMQLAE-VEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIIL 358
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+ LVD Y+KCG + A F++ ++ + +I A +G +A+ LF M + I
Sbjct: 359 GTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASI 418
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
+P VTF+ +L A H VE G ++F+SMT DY I P +HY C++DL GRA +++A
Sbjct: 419 EPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAY 478
Query: 550 EFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEG 609
+F++++P E +AVI + L+ C +++N E+ EA ++++ L ++ Y+ L+N+YA+ G
Sbjct: 479 QFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNIYASVG 538
Query: 610 NWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
W IRK+M+ + GCS + ++ + F D HP+ IY
Sbjct: 539 QWKNAAMIRKEMKDRGIEKTPGCSLIELDGVVVEFFAEDSDHPQLKEIY 587
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/479 (22%), Positives = 188/479 (39%), Gaps = 104/479 (21%)
Query: 16 AIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQA 75
A+K GL + LIH+Y+ + ++ LFD + E V WN II+A +K+ + +
Sbjct: 145 AVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEV 204
Query: 76 RSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLC 135
+F K +E+ A DE T+ S + C
Sbjct: 205 VEMF-----------------------------KGMLEVGVA-----FDEITLVSVVTAC 230
Query: 136 VKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISK 195
++ + G+ + ++ + + +++LIDMY+KC +A R+F+G
Sbjct: 231 GRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGM--------- 281
Query: 196 NAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGV 255
+ D V+W+ +ISGY Q E L LF M V
Sbjct: 282 ------------------------QSRDVVAWSAMISGYTQADQCREALALFSEMQLAEV 317
Query: 256 RWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAES 315
N+ T S LSAC L ++ K +HS++ + L + + +VD Y KC ++ A
Sbjct: 318 EPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVE 377
Query: 316 MLLLKGVRNSFSISSMIVGYSLQGN----------------------------------- 340
V+NS++ +++I G + G
Sbjct: 378 AFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCL 437
Query: 341 MEEARRHFDSLTEKNVVVWTALFSG-YVKAQNCEALFDLLSEFVTKEGVVTDALILVILL 399
+EE RRHFDS+T+ + A G V L D +F+ + +A+I LL
Sbjct: 438 VEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALL 497
Query: 400 GACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDL 458
+CA+ + G+E I+ + I L ++Y+ G A +I + +R +
Sbjct: 498 SSCAVHKNVEIGEEALKQIVSLNPSHSGDYI-LLSNIYASVGQWKNAAMIRKEMKDRGI 555
>gi|147864471|emb|CAN82639.1| hypothetical protein VITISV_028820 [Vitis vinifera]
Length = 871
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 192/573 (33%), Positives = 308/573 (53%), Gaps = 37/573 (6%)
Query: 102 GYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVG-FGRQLHAFMVKTSNDASG 160
G AD L LF +MQ D+ + ++FT++ L C +N G+ +H ++++ D
Sbjct: 76 GLSADVLGLFTKMQ--DQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGVDLDA 133
Query: 161 FAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPE 220
+S++D Y KCRC+ A ++F G E + +S N M+++ + G+M+ ++ F RQ
Sbjct: 134 VLNNSILDYYVKCRCFGYAEKLF-GLMAEKDTVSWNIMMSSYLQIGDMQKSVDLF-RQLP 191
Query: 221 LNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKE 280
DA SWNT+I G ++NG L+L +M G +N+ TF+ AL L + K+
Sbjct: 192 GKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQ 251
Query: 281 IHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGN 340
IH+ VLK G++ + FV + ++D+YCKC M A ++ K + SSM+ N
Sbjct: 252 IHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKAS--VIFKHLPRE---SSMM-------N 299
Query: 341 MEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLG 400
EE+ D++ E V W+++ SGYV+ E S + + V D L ++
Sbjct: 300 SEESCD--DAVVES--VSWSSMVSGYVQNGGFEDALKTFSSMICSQ-VEVDKFTLTSVVS 354
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL 460
ACA L G+++H YI ++G +D L S+++DMY KCG++ A +IF +R++VL
Sbjct: 355 ACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVL 414
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
+ MI+ A HG +A+ LFE M+ +GI P+ V+FV +L+A H G +E G KYF M
Sbjct: 415 WTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMR 474
Query: 521 ADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELA 580
Y I P +H+ CM+DLYGRA +L + EF+ + + + + SFL+ CR+++N E+
Sbjct: 475 EVYGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHNNAISKLSSVWRSFLSSCRVHKNIEM- 533
Query: 581 GEAEEKLLRLEGNNKARYVQLANV-YAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEH 639
G + LA V + +G + R Q RG+K N SW+ +++
Sbjct: 534 -----------GIWDLTFCFLAFVPLSKDGKRSAKIRSLMQQRGVKKN--PSQSWIQLKN 580
Query: 640 EIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
+H F +GD SHP+ IYS L G L EI
Sbjct: 581 HVHSFVMGDRSHPQDTKIYSYLDELIGRLKEIG 613
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 143/579 (24%), Positives = 257/579 (44%), Gaps = 90/579 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H ++ G+ L + N ++ Y K + KLF M E++ SWN ++S+ ++ D+
Sbjct: 121 HGWILRNGVDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDM 180
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+++ LF P KD ++N+M+ G + G E AL+L +M +A ++ T + L
Sbjct: 181 QKSVDLFRQLPGKDAASWNTMIDGLMR-NGCERVALELLYKMVAAGP--AFNKLTFSIAL 237
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
L L +G G+Q+H ++K GF +SLIDMY KC E+A +F+ E ++
Sbjct: 238 VLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPRESSM 297
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
++ C + +E +VSW++++SGYVQNG E+ LK F M
Sbjct: 298 MNSE----ESCDDAVVE--------------SVSWSSMVSGYVQNGGFEDALKTFSSMIC 339
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+ V ++ T S +SAC ++ +++H ++ K G + F+ S I+D+Y KC ++N
Sbjct: 340 SQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLND 399
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
A + RN +SMI G +L G EA R F
Sbjct: 400 AWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLF------------------------ 435
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM-GVQMDKKLIS 431
E + EG+ + + V +L AC+ L G + + + G++ + +
Sbjct: 436 --------ELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFT 487
Query: 432 TLVDMYSKCGNMT-YAEIIFQNFIER-DLVLYNVMIACYAHHGHE--------------- 474
+VD+Y + G + E I N I + V + + +C H E
Sbjct: 488 CMVDLYGRAGRLNEIKEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGIWDLTFCFLAFVP 547
Query: 475 -----EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPET 529
+++ + M ++G+K + + + H S MG++ S D KI
Sbjct: 548 LSKDGKRSAKIRSLMQQRGVKKNPSQ--SWIQLKNHVHSFVMGDR---SHPQDTKI---- 598
Query: 530 DHYACMIDLYGRANQLEKAIE---FMKSIPTEEDAVILG 565
Y+ + +L GR ++ + + M+ + E+ V+LG
Sbjct: 599 --YSYLDELIGRLKEIGYSTDVTPVMQDVEQEQRQVLLG 635
>gi|449516814|ref|XP_004165441.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like isoform 1 [Cucumis sativus]
Length = 703
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 180/625 (28%), Positives = 319/625 (51%), Gaps = 8/625 (1%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K G T N LI++Y K LL +R LFD + S N ++S +K L
Sbjct: 84 HAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFDSCSVLDSVSCNIMMSGYVKLRQL 143
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+ AR LF P + V+Y +M+ G + + +A+++F +M+SA + +E T+ S +
Sbjct: 144 ENARQLFAKMPERGCVSYTTMILGLAQNDCW-GEAIEVFKDMRSAG--VAPNEVTMASVM 200
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C + + R LHA ++K ++L+ MY ++ R+F N
Sbjct: 201 SACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCVFSSLKDTKRLFNEMPVR-NT 259
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+S N M+ + G ++ A + F R PE D SW +I G+VQ + L L+ M +
Sbjct: 260 VSWNVMLKGYVKSGLVDQARELFERIPE-RDVFSWAIMIDGFVQMKRLRKALLLYSAMRK 318
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+ + NE LSAC +++ ++ HS ++KNG + F+ + I+ Y C ++
Sbjct: 319 SDLHPNEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQATIISFYAACRRIDL 378
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
A + + S + MIVG++ G +++AR+ FD + EK+V W+ + SGY + +
Sbjct: 379 AYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELP 438
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
+ DL + + V + + +V + A A L G+ H Y+ + ++ L +
Sbjct: 439 DVALDLFHGMIDSK-VEPNEITMVSVFSAIAALGKLPEGRWAHEYVCNKVIPLNDNLSAA 497
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVL--YNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
++DMY+KCG++ A +F+ ++ + +N +I A HGH ++ +F + + IK
Sbjct: 498 IIDMYAKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGHANLSLEIFSNLQRRSIK 557
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
+++TF+ +LSA H G VE+GE+YF SM + + P HY C++DL GR +L +A E
Sbjct: 558 LNSITFLGVLSACCHAGLVEVGERYFWSMKTQHGVEPNIKHYGCLVDLLGRVGRLREAEE 617
Query: 551 FMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGN 610
++++P + D VI G+ L R + E+ A E L RL+ ++ V L+N+YA G
Sbjct: 618 IVRTMPMKADVVIWGTLLASSRTHGEVEIGERAAENLARLQPSHGPGRVLLSNLYADAGL 677
Query: 611 WAEMGRIRKQMRGMKGNRFAGCSWV 635
W + +R+ ++ + R G S V
Sbjct: 678 WEDAALVRRAIQSQRMIRSPGYSGV 702
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/470 (24%), Positives = 228/470 (48%), Gaps = 37/470 (7%)
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
E +V S L C + G+Q+HA ++K +++ F ++SLI+MY KC A +F+
Sbjct: 61 ELSVVSALKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFD 120
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
C+ ++ +S N M++ + ++E A + F + PE VS+ T+I G QN E +
Sbjct: 121 SCS-VLDSVSCNIMMSGYVKLRQLENARQLFAKMPE-RGCVSYTTMILGLAQNDCWGEAI 178
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
++F M GV NE T AS +SAC + + + +H+ V+K +S+ ++ +Y
Sbjct: 179 EVFKDMRSAGVAPNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMY 238
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
C ++ + + VRN+ S + M+ GY G +++AR F+ + E++V W +
Sbjct: 239 CVFSSLKDTKRLFNEMPVRNTVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWAIMID 298
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
G+V+ + LL + K + + +++V LL AC ++ G++ H+ I++ G
Sbjct: 299 GFVQMKRLRKAL-LLYSAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFV 357
Query: 425 MDKKLISTLVDMYSKC-------------------------------GNMTYAEIIFQNF 453
+ +T++ Y+ C G + A IF
Sbjct: 358 CFDFIQATIISFYAACRRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMM 417
Query: 454 IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
E+D+ ++ MI+ YA + + A+ LF M++ ++P+ +T V++ SA G + G
Sbjct: 418 PEKDVFSWSTMISGYAQNELPDVALDLFHGMIDSKVEPNEITMVSVFSAIAALGKLPEG- 476
Query: 514 KYFNSMTADYKISPETDHY-ACMIDLYGRANQLEKAIEFMKSIPTEEDAV 562
++ + + K+ P D+ A +ID+Y + ++ A++ + I + V
Sbjct: 477 RWAHEYVCN-KVIPLNDNLSAAIIDMYAKCGSIDTALDVFRQIKDKTSTV 525
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 119/289 (41%), Gaps = 39/289 (13%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
+S++++E H +K G +I Y+ + + + + ++ S N
Sbjct: 337 QSVSIEEGRQFHSLIVKNGFVCFDFIQATIISFYAACRRIDLAYLQYQMSDKSHLTSSNV 396
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I K+ + QAR +FD P KD+ ++++M+ GY E + AL LF M D +
Sbjct: 397 MIVGFTKNGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELPDV-ALDLFHGM--IDSKV 453
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+E T+ S + L + GR H ++ + +++IDMY+KC + A
Sbjct: 454 EPNEITMVSVFSAIAALGKLPEGRWAHEYVCNKVIPLNDNLSAAIIDMYAKCGSIDTALD 513
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
VF ++ + +S WN +I G +G A
Sbjct: 514 VFRQIKDKTSTVSP-------------------------------WNAIICGLAMHGHAN 542
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACC--GLRNVKCAKEIHSWVLKN 288
L++F + ++ N TF LSACC GL V E + W +K
Sbjct: 543 LSLEIFSNLQRRSIKLNSITFLGVLSACCHAGLVEV---GERYFWSMKT 588
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 194/729 (26%), Positives = 327/729 (44%), Gaps = 138/729 (18%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN------------ 60
H QA K GL L + L+ +Y+K + + K+F MPE+N +WN
Sbjct: 236 HAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDV 295
Query: 61 -----------------------TIISACIKSHDLKQAR--------------------- 76
T++ C S +LKQ +
Sbjct: 296 TGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGL 355
Query: 77 --------------SLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
+F + D+V +++++ ++ +G +++KLF M+ D
Sbjct: 356 VDMYSKCGLAIDAIGVFKTIKKPDIVVWSALIT-CLDQQGQSEESIKLFHLMRLGD--TL 412
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
+++T+ S L+ N+ +G+ +HA + K + ++L+ MY K C + ++
Sbjct: 413 PNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKL 472
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
+E + D +SWN +SG G +
Sbjct: 473 YESMVDR---------------------------------DLISWNAYLSGLHDCGMYDR 499
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
L +F M E G N +TF S L +C L +V +++H+ ++KN L N FV + ++D
Sbjct: 500 PLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALID 559
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
+Y KC M L E+A F+ L+ +++ WT +
Sbjct: 560 MYAKC--------MYL-----------------------EDADVAFNRLSVRDLFTWTVI 588
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
+ Y + E + + + +EGV + L L C+ A+L G+++H+ + + G
Sbjct: 589 ITNYAQTNQGEKALNYFRQ-MQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSG 647
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
D + S LVDMY+KCG M AE +F+ I RD + +N +I YA +G KA+ F
Sbjct: 648 HVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFR 707
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRA 542
ML++GI PD VTF ILSA H G VE G+++FNSM D+ ISP DH ACM+D+ GR
Sbjct: 708 MMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRV 767
Query: 543 NQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLA 602
+ ++ +F++ + ++A+I + L +++ N L +A KL L+ ++ Y+ L+
Sbjct: 768 GKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLS 827
Query: 603 NVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLA 662
N++A EG W ++ R+R M + GCSWV ++H F D SHP+ I+ L
Sbjct: 828 NIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLD 887
Query: 663 IFTGELYEI 671
EL I
Sbjct: 888 ELDRELASI 896
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 154/621 (24%), Positives = 269/621 (43%), Gaps = 149/621 (23%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
RSL + +A+ H +K + + L+++Y+K +R + +MP+R+V SW
Sbjct: 126 RSLGVAKAI--HGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTA 183
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I + AEG+ D++ LF EMQ +E I
Sbjct: 184 LIQGLV--------------------------------AEGFANDSIYLFQEMQ--NEGI 209
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+EFT+ + L C + + G+Q+HA K F S+L+D+Y+KC
Sbjct: 210 MPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKC-------- 261
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
GE+E+A K F PE ND V+WN L++GY Q GD
Sbjct: 262 ------------------------GEIELASKMFIGMPEQND-VTWNVLLNGYAQRGDVT 296
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
LKLF M E V+ NE T + L C +N+K + IHS ++K G N F+ G+V
Sbjct: 297 GVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLV 356
Query: 302 DVYCKC-----------------------------------ENMNYAESMLLLKGVRNSF 326
D+Y KC E++ M L + N +
Sbjct: 357 DMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQY 416
Query: 327 SISSMIVGYSLQGNME-----------------------------------EARRHFDSL 351
+I S++ + GN++ + + ++S+
Sbjct: 417 TICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESM 476
Query: 352 TEKNVVVWTALFSGYVKAQNCEALFDLLSEF--VTKEGVVTDALILVILLGACALQAALH 409
+++++ W A SG +C L+ F + +EG + + + +LG+C+ +H
Sbjct: 477 VDRDLISWNAYLSGL---HDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVH 533
Query: 410 PGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYA 469
G+++HA+I++ + + + + L+DMY+KC + A++ F RDL + V+I YA
Sbjct: 534 YGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYA 593
Query: 470 HHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPET 529
EKA+ F +M ++G+KP+ T LS S+E G++ +SM +K +
Sbjct: 594 QTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQ-LHSMV--FKSGHVS 650
Query: 530 DHY--ACMIDLYGRANQLEKA 548
D + + ++D+Y + +E+A
Sbjct: 651 DMFVGSALVDMYAKCGCMEEA 671
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 163/382 (42%), Gaps = 59/382 (15%)
Query: 262 FASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKG 321
++S L C R++ AK IH ++K+ + + + +V+VY KC YA +L
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLA--- 171
Query: 322 VRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSE 381
+ +++VV WTAL G V L E
Sbjct: 172 ----------------------------KMPDRDVVSWTALIQGLVAEGFANDSIYLFQE 203
Query: 382 FVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
+ EG++ + L L AC+L AL GK++HA ++G+ +D + S LVD+Y+KCG
Sbjct: 204 -MQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCG 262
Query: 442 NMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
+ A +F E++ V +NV++ YA G + LF M+E +K + T +L
Sbjct: 263 EIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLK 322
Query: 502 AFRHCGSVEMGEKYFNSMTADYKISPETDHY-AC-MIDLYGRANQLEKAIEFMKSIPTEE 559
+ +++ G+ + + K E + + C ++D+Y + AI K+I +
Sbjct: 323 GCANSKNLKQGQVIHSLII---KCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPD 379
Query: 560 DAVILGSFLNVCRLNRNAELAGEAEEK-----LLRLEGNNKARYVQLANVYAAEGNWAEM 614
+++ S L C + G++EE L+RL G+ + ++ +A N +
Sbjct: 380 --IVVWSALITC-----LDQQGQSEESIKLFHLMRL-GDTLPNQYTICSLLSAATNTGNL 431
Query: 615 GRIRKQMRGMKGNRFAGCSWVY 636
G C W Y
Sbjct: 432 ---------QYGQSIHACVWKY 444
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 203/671 (30%), Positives = 338/671 (50%), Gaps = 54/671 (8%)
Query: 30 QLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA----CIKSH-DLKQARSLFDSSPH 84
+L+ + SK + +R+ R+ + ++ S N +S C + H S+F SSP
Sbjct: 3 ELVALASKISNIRQLRQFHGHLVHNSLHSHNYWVSLLLINCTRLHAHPAYVDSIFTSSPS 62
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
D Y+ ML Y + G + LF S + +R F + L K G
Sbjct: 63 PDASVYSCML-KYYSRMGAHNQVVSLFKCTHSLN--LRPQPFVYIYLIKLAGK-----SG 114
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE---------------GC--- 186
HA+++K + F ++++DMY+K + A +FE GC
Sbjct: 115 NLFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKS 174
Query: 187 ---TEEV---------NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
TE V N+I+ +MV + G++E A + F PE VSWN + S Y
Sbjct: 175 GNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPE-RSVVSWNAMQSAY 233
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
Q +E L LF +M E G+ ++ T+ +S+C + + A I + + ++ N
Sbjct: 234 AQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNS 293
Query: 295 FVSSGIVDVYCKCENMNYAESML-LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
FV + ++D++ K N+ A ++ L RN+ + + MI Y+ G + AR FD++ +
Sbjct: 294 FVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPK 353
Query: 354 KNVVVWTALFSGYVKAQNCEAL--FDLLSEFVTKEGVVTDALILVILLGACALQAALHPG 411
++VV W ++ +GY AQN E+ +L E ++ + D + + +L AC AL
Sbjct: 354 RDVVSWNSMIAGY--AQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLS 411
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
+ + +++ ++L+ MYSKCG++ A IFQ RD+V +N +I+ +A +
Sbjct: 412 YWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAAN 471
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH 531
GH ++AI L M E+GI+PD VT++ +L+A H G + G+ F S+ A P DH
Sbjct: 472 GHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQA-----PTVDH 526
Query: 532 YACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLE 591
YACM+DL GRA +L++A ++S+P + A + GS LN R+++ L A KL LE
Sbjct: 527 YACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELE 586
Query: 592 GNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSH 651
N YV L+N+YA+ G W ++ R+R+ M+ + G SWV + ++H FTVGD SH
Sbjct: 587 PQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSH 646
Query: 652 PKTNAIYSVLA 662
++ IY +LA
Sbjct: 647 EQSKDIYKLLA 657
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 140/584 (23%), Positives = 255/584 (43%), Gaps = 115/584 (19%)
Query: 7 KEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISAC 66
K + H +K G N ++ +Y+K+ + +R LF++M ER + WN++IS C
Sbjct: 112 KSGNLFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGC 171
Query: 67 IKS-------------------------------HDLKQARSLFDSSPHKDLVTYNSMLC 95
KS DL+ AR FD P + +V++N+M
Sbjct: 172 WKSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQS 231
Query: 96 GYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTS 155
Y E +AL LF +M +E I D+ T T++ C + + + + +
Sbjct: 232 AYAQKE-CPKEALNLFHQM--LEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKH 288
Query: 156 NDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTF 215
+ F ++L+DM++K E A +F+ + N ++ N M++A R G++ +A + F
Sbjct: 289 IVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELF 348
Query: 216 WRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE-NGVRWNEHTFASALSACCGLRN 274
P+ D VSWN++I+GY QNG++ ++LF M ++ +E T AS LSAC +
Sbjct: 349 DNMPK-RDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGA 407
Query: 275 VKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVG 334
+K + WVL ++ + GI +S+I
Sbjct: 408 LK----LSYWVLD--IVREKNIKLGIS-------------------------GFNSLIFM 436
Query: 335 YSLQGNMEEARRHFDSLTEKNVVVWTALFSGY-VKAQNCEALFDLLSEFVTKEGVVTDAL 393
YS G++ +A R F ++ ++VV + L SG+ EA+ +L+ + +EG+ D +
Sbjct: 437 YSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLT--MEEEGIEPDHV 494
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF 453
+ +L AC+ HA +L G + K + + VD Y+
Sbjct: 495 TYIGVLTACS-----------HAGLLNEGKNVFKSIQAPTVDHYA--------------- 528
Query: 454 IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
M+ G ++A +L + M +KP A + ++L+A R V +GE
Sbjct: 529 ---------CMVDLLGRAGELDEAKMLIQSM---PMKPHAGVYGSLLNASRIHKRVGLGE 576
Query: 514 KYFNSMTADYKISPET-DHYACMIDLY---GRANQLEKAIEFMK 553
+ + +++ P+ +Y + ++Y GR +++ E MK
Sbjct: 577 LAASKL---FELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMK 617
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 194/729 (26%), Positives = 327/729 (44%), Gaps = 138/729 (18%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN------------ 60
H QA K GL L + L+ +Y+K + + K+F MPE+N +WN
Sbjct: 236 HAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDV 295
Query: 61 -----------------------TIISACIKSHDLKQAR--------------------- 76
T++ C S +LKQ +
Sbjct: 296 TGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGL 355
Query: 77 --------------SLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
+F + D+V +++++ ++ +G +++KLF M+ D
Sbjct: 356 VDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITC-LDQQGQSEESIKLFHLMRLGD--TL 412
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
+++T+ S L+ N+ +G+ +HA + K + ++L+ MY K C + ++
Sbjct: 413 PNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKL 472
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
+E + D +SWN +SG G +
Sbjct: 473 YESMVDR---------------------------------DLISWNAYLSGLHDCGMYDR 499
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
L +F M E G N +TF S L +C L +V +++H+ ++KN L N FV + ++D
Sbjct: 500 PLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALID 559
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
+Y KC M L E+A F+ L+ +++ WT +
Sbjct: 560 MYAKC--------MYL-----------------------EDADVAFNRLSVRDLFTWTVI 588
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
+ Y + E + + + +EGV + L L C+ A+L G+++H+ + + G
Sbjct: 589 ITNYAQTNQGEKALNYFRQ-MQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSG 647
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
D + S LVDMY+KCG M AE +F+ I RD + +N +I YA +G KA+ F
Sbjct: 648 HVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFR 707
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRA 542
ML++GI PD VTF ILSA H G VE G+++FNSM D+ ISP DH ACM+D+ GR
Sbjct: 708 MMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRV 767
Query: 543 NQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLA 602
+ ++ +F++ + ++A+I + L +++ N L +A KL L+ ++ Y+ L+
Sbjct: 768 GKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLS 827
Query: 603 NVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLA 662
N++A EG W ++ R+R M + GCSWV ++H F D SHP+ I+ L
Sbjct: 828 NIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLD 887
Query: 663 IFTGELYEI 671
EL I
Sbjct: 888 ELDRELASI 896
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 154/621 (24%), Positives = 269/621 (43%), Gaps = 149/621 (23%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
RSL + +A+ H +K + + L+++Y+K +R + +MP+R+V SW
Sbjct: 126 RSLGVAKAI--HGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTA 183
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I + AEG+ D++ LF EMQ +E I
Sbjct: 184 LIQGLV--------------------------------AEGFANDSIYLFQEMQ--NEGI 209
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+EFT+ + L C + + G+Q+HA K F S+L+D+Y+KC
Sbjct: 210 MPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKC-------- 261
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
GE+E+A K F PE ND V+WN L++GY Q GD
Sbjct: 262 ------------------------GEIELASKMFIGMPEQND-VTWNVLLNGYAQRGDVT 296
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
LKLF M E V+ NE T + L C +N+K + IHS ++K G N F+ G+V
Sbjct: 297 GVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLV 356
Query: 302 DVYCKC-----------------------------------ENMNYAESMLLLKGVRNSF 326
D+Y KC E++ M L + N +
Sbjct: 357 DMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQY 416
Query: 327 SISSMIVGYSLQGNME-----------------------------------EARRHFDSL 351
+I S++ + GN++ + + ++S+
Sbjct: 417 TICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESM 476
Query: 352 TEKNVVVWTALFSGYVKAQNCEALFDLLSEF--VTKEGVVTDALILVILLGACALQAALH 409
+++++ W A SG +C L+ F + +EG + + + +LG+C+ +H
Sbjct: 477 VDRDLISWNAYLSGL---HDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVH 533
Query: 410 PGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYA 469
G+++HA+I++ + + + + L+DMY+KC + A++ F RDL + V+I YA
Sbjct: 534 YGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYA 593
Query: 470 HHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPET 529
EKA+ F +M ++G+KP+ T LS S+E G++ +SM +K +
Sbjct: 594 QTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQ-LHSMV--FKSGHVS 650
Query: 530 DHY--ACMIDLYGRANQLEKA 548
D + + ++D+Y + +E+A
Sbjct: 651 DMFVGSALVDMYAKCGCMEEA 671
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 163/382 (42%), Gaps = 59/382 (15%)
Query: 262 FASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKG 321
++S L C R++ AK IH ++K+ + + + +V+VY KC YA +L
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLA--- 171
Query: 322 VRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSE 381
+ +++VV WTAL G V L E
Sbjct: 172 ----------------------------KMPDRDVVSWTALIQGLVAEGFANDSIYLFQE 203
Query: 382 FVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
+ EG++ + L L AC+L AL GK++HA ++G+ +D + S LVD+Y+KCG
Sbjct: 204 -MQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCG 262
Query: 442 NMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
+ A +F E++ V +NV++ YA G + LF M+E +K + T +L
Sbjct: 263 EIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLK 322
Query: 502 AFRHCGSVEMGEKYFNSMTADYKISPETDHY-AC-MIDLYGRANQLEKAIEFMKSIPTEE 559
+ +++ G+ + + K E + + C ++D+Y + AI K+I +
Sbjct: 323 GCANSKNLKQGQVIHSLII---KCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPD 379
Query: 560 DAVILGSFLNVCRLNRNAELAGEAEEK-----LLRLEGNNKARYVQLANVYAAEGNWAEM 614
+++ S L C + G++EE L+RL G+ + ++ +A N +
Sbjct: 380 --IVVWSALITC-----LDQQGQSEESIKLFHLMRL-GDTLPNQYTICSLLSAATNTGNL 431
Query: 615 GRIRKQMRGMKGNRFAGCSWVY 636
G C W Y
Sbjct: 432 ---------QYGQSIHACVWKY 444
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 188/622 (30%), Positives = 312/622 (50%), Gaps = 80/622 (12%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
E N F NT+++ K L ++ L S +DLVT+N++L E +AL+
Sbjct: 146 ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQL-LEALEYLR 204
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSN-DASGFAVSSLIDMYS 171
EM E + DEFT++S L C L + G++LHA+ +K + D + F S+L+DMY
Sbjct: 205 EM--VLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYC 262
Query: 172 KCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLI 231
C+ RVF+G F R+ L WN +I
Sbjct: 263 NCKQVLSGRRVFDG----------------------------MFDRKIGL-----WNAMI 289
Query: 232 SGYVQNGDAEEGLKLFVRMGEN-GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL 290
+GY QN +E L LF+ M E+ G+ N T A + AC + IH +V+K GL
Sbjct: 290 AGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL 349
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
+ FV + ++D+Y + G ++ A R F
Sbjct: 350 DRDRFVQNTLMDMYSRL-------------------------------GKIDIAMRIFGK 378
Query: 351 LTEKNVVVWTALFSGYVKAQNCEALFDLL----------SEFVTKEGVVTDALILVILLG 400
+ ++++V W + +GYV +++ E LL S+ ++ + +++ L+ +L
Sbjct: 379 MEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILP 438
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL 460
+CA +AL GKEIHAY ++ + D + S LVDMY+KCG + + +F +++++
Sbjct: 439 SCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVIT 498
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
+NV+I Y HG+ ++AI L M+ +G+KP+ VTF+++ +A H G V+ G + F M
Sbjct: 499 WNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMK 558
Query: 521 ADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE-EDAVILGSFLNVCRLNRNAEL 579
DY + P +DHYAC++DL GRA ++++A + M +P + A S L R++ N E+
Sbjct: 559 PDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEI 618
Query: 580 AGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEH 639
A + L++LE N + YV LAN+Y++ G W + +R+ M+ + GCSW+
Sbjct: 619 GEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGD 678
Query: 640 EIHIFTVGDVSHPKTNAIYSVL 661
E+H F GD SHP++ + L
Sbjct: 679 EVHKFVAGDSSHPQSEKLSGYL 700
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 129/514 (25%), Positives = 235/514 (45%), Gaps = 84/514 (16%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
NT+++ K D +FD ++ V++NS++ + E +E AL+ F M DE
Sbjct: 50 NTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEM-ALEAFRCM--LDE 106
Query: 120 HIRMDEFTVTSTLNLCVKLL---NVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCY 176
++ FT+ S + C L + G+Q+HA+ ++ + + F +++L+ MY K
Sbjct: 107 NVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLR-KGELNSFIINTLVAMYGK---- 161
Query: 177 EEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQ 236
+ K A ++ L +F + D V+WNT++S Q
Sbjct: 162 ----------------LGKLA---------SSKVLLGSFGGR----DLVTWNTVLSSLCQ 192
Query: 237 NGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG-LISNPF 295
N E L+ M GV +E T +S L AC L ++ KE+H++ LKNG L N F
Sbjct: 193 NEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSF 252
Query: 296 VSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKN 355
V S +VD+YC C+ +L G RR FD + ++
Sbjct: 253 VGSALVDMYCNCKQ--------VLSG-----------------------RRVFDGMFDRK 281
Query: 356 VVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIH 415
+ +W A+ +GY + ++ + L G++ ++ + ++ AC A + IH
Sbjct: 282 IGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIH 341
Query: 416 AYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEE 475
++++ G+ D+ + +TL+DMYS+ G + A IF +RDLV +N MI Y H E
Sbjct: 342 GFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHE 401
Query: 476 KAILLFEEM------LEKG-----IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYK 524
A+LL +M + KG +KP+++T + IL + ++ G K ++
Sbjct: 402 DALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKG-KEIHAYAIKNN 460
Query: 525 ISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE 558
++ + + ++D+Y + L+ + + IP +
Sbjct: 461 LATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK 494
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 138/296 (46%), Gaps = 37/296 (12%)
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL-ISNPFVSSGIVDVYCKCENMNY 312
G++ + + F + L A L++++ K+IH+ V K G + + V++ +V++Y KC
Sbjct: 5 GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKC----- 59
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G+ + FD ++E+N V W +L S +
Sbjct: 60 --------------------------GDFGAVYKVFDRISERNQVSWNSLISSLCSFEKW 93
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACA---LQAALHPGKEIHAYILRMGVQMDKKL 429
E + + E V + LV ++ AC+ + L GK++HAY LR G +++ +
Sbjct: 94 EMALEAF-RCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFI 151
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
I+TLV MY K G + ++++ +F RDLV +N +++ + +A+ EM+ +G+
Sbjct: 152 INTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGV 211
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQL 545
+PD T ++L A H + G++ + + + + ++D+Y Q+
Sbjct: 212 EPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQV 267
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
H AIK L + L+ +Y+K L+ SRK+FD++P++NV +WN II A
Sbjct: 453 HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMA 505
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 188/622 (30%), Positives = 312/622 (50%), Gaps = 80/622 (12%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
E N F NT+++ K L ++ L S +DLVT+N++L E +AL+
Sbjct: 233 ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQL-LEALEYLR 291
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSN-DASGFAVSSLIDMYS 171
EM E + DEFT++S L C L + G++LHA+ +K + D + F S+L+DMY
Sbjct: 292 EM--VLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYC 349
Query: 172 KCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLI 231
C+ RVF+G F R+ L WN +I
Sbjct: 350 NCKQVLSGRRVFDG----------------------------MFDRKIGL-----WNAMI 376
Query: 232 SGYVQNGDAEEGLKLFVRMGEN-GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL 290
+GY QN +E L LF+ M E+ G+ N T A + AC + IH +V+K GL
Sbjct: 377 AGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL 436
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
+ FV + ++D+Y + G ++ A R F
Sbjct: 437 DRDRFVQNTLMDMYSRL-------------------------------GKIDIAMRIFGK 465
Query: 351 LTEKNVVVWTALFSGYVKAQNCEALFDLL----------SEFVTKEGVVTDALILVILLG 400
+ ++++V W + +GYV +++ E LL S+ ++ + +++ L+ +L
Sbjct: 466 MEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILP 525
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL 460
+CA +AL GKEIHAY ++ + D + S LVDMY+KCG + + +F +++++
Sbjct: 526 SCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVIT 585
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
+NV+I Y HG+ ++AI L M+ +G+KP+ VTF+++ +A H G V+ G + F M
Sbjct: 586 WNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMK 645
Query: 521 ADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE-EDAVILGSFLNVCRLNRNAEL 579
DY + P +DHYAC++DL GRA ++++A + M +P + A S L R++ N E+
Sbjct: 646 PDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEI 705
Query: 580 AGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEH 639
A + L++LE N + YV LAN+Y++ G W + +R+ M+ + GCSW+
Sbjct: 706 GEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGD 765
Query: 640 EIHIFTVGDVSHPKTNAIYSVL 661
E+H F GD SHP++ + L
Sbjct: 766 EVHKFVAGDSSHPQSEKLSGYL 787
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 141/578 (24%), Positives = 251/578 (43%), Gaps = 126/578 (21%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
++ + L + + HV G+ T+ N L+++Y K K+FD + ERN SWN
Sbjct: 110 LQDMELGKQIHAHVYKFGYGVDSVTVA-NTLVNLYRKCGDFGAVYKVFDRISERNQVSWN 168
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
++I S LC + E +E AL+ F M DE+
Sbjct: 169 SLI----------------------------SSLCSF---EKWEM-ALEAFRCM--LDEN 194
Query: 121 IRMDEFTVTSTLNLCVKLL---NVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYE 177
+ FT+ S + C L + G+Q+HA+ ++ + + F +++L+ MY K
Sbjct: 195 VEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLR-KGELNSFIINTLVAMYGKL---- 249
Query: 178 EACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQN 237
+ ++ L +F + D V+WNT++S QN
Sbjct: 250 -------------------------GKLASSKVLLGSFGGR----DLVTWNTVLSSLCQN 280
Query: 238 GDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG-LISNPFV 296
E L+ M GV +E T +S L AC L ++ KE+H++ LKNG L N FV
Sbjct: 281 EQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFV 340
Query: 297 SSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNV 356
S +VD+YC C+ +L G RR FD + ++ +
Sbjct: 341 GSALVDMYCNCKQ--------VLSG-----------------------RRVFDGMFDRKI 369
Query: 357 VVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHA 416
+W A+ +GY + ++ + L G++ ++ + ++ AC A + IH
Sbjct: 370 GLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHG 429
Query: 417 YILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
++++ G+ D+ + +TL+DMYS+ G + A IF +RDLV +N MI Y H E
Sbjct: 430 FVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHED 489
Query: 477 AILLFEEM------LEKG-----IKPDAVTFVAILSAFRHCGSVEMGEKYF-----NSMT 520
A+LL +M + KG +KP+++T + IL + ++ G++ N++
Sbjct: 490 ALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLA 549
Query: 521 ADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE 558
D + + ++D+Y + L+ + + IP +
Sbjct: 550 TDVAVG------SALVDMYAKCGCLQMSRKVFDQIPQK 581
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 122/273 (44%), Gaps = 78/273 (28%)
Query: 7 KEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISAC 66
KEA+ H +K GL N L+ +YS+ + + ++F +M +R++ +WNT+I+
Sbjct: 424 KEAI--HGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMIT-- 479
Query: 67 IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI----- 121
GY+ +E +E DAL L +MQ+ + +
Sbjct: 480 -----------------------------GYVFSEHHE-DALLLLHKMQNLERKVSKGAS 509
Query: 122 ----RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV-SSLIDMYSKCRCY 176
+ + T+ + L C L + G+++HA+ +K +N A+ AV S+L+DMY+KC C
Sbjct: 510 RVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIK-NNLATDVAVGSALVDMYAKCGC- 567
Query: 177 EEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQ 236
++M+ K F + P+ N ++WN +I Y
Sbjct: 568 -------------------------------LQMSRKVFDQIPQKN-VITWNVIIMAYGM 595
Query: 237 NGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
+G+ +E + L M GV+ NE TF S +AC
Sbjct: 596 HGNGQEAIDLLRMMMVQGVKPNEVTFISVFAAC 628
>gi|15240444|ref|NP_198063.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635756|sp|O04659.2|PP398_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27110
gi|332006268|gb|AED93651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 192/659 (29%), Positives = 323/659 (49%), Gaps = 104/659 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K+G + + L+ +Y+K NL S ++FDEMPER
Sbjct: 130 HTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPER------------------ 171
Query: 73 KQARSLFDSSPHKDLVTYNSML-CGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
D+ ++N+++ C Y + E +A L+LF M+S+ + ++T
Sbjct: 172 -------------DVASWNTVISCFYQSGEAEKA--LELFGRMESSG--FEPNSVSLTVA 214
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
++ C +LL + G+++H VK + + S+L+DMY KC C E A VF+
Sbjct: 215 ISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQ------- 267
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
+M K+ V+WN++I GYV GD++ +++ RM
Sbjct: 268 -----------------KMPRKSL---------VAWNSMIKGYVAKGDSKSCVEILNRMI 301
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
G R ++ T S L AC RN+ K IH +V+++ + ++ +V+ ++D+Y KC N
Sbjct: 302 IEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEAN 361
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVV-VWTALFSGYVKAQ 370
AE++ S T+K+V W + S Y+
Sbjct: 362 LAETVF--------------------------------SKTQKDVAESWNVMISSYISVG 389
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
N ++ + V+ GV D + +L AC+ AAL GK+IH I ++ D+ L+
Sbjct: 390 NWFKAVEVYDQMVSV-GVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLL 448
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
S L+DMYSKCGN A IF + ++D+V + VMI+ Y HG +A+ F+EM + G+K
Sbjct: 449 SALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLK 508
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
PD VT +A+LSA H G ++ G K+F+ M + Y I P +HY+CMID+ GRA +L +A E
Sbjct: 509 PDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYE 568
Query: 551 FMKSIP-TEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEG 609
++ P T ++A +L + + C L+ L L+ ++ + Y+ L N+YA+
Sbjct: 569 IIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGE 628
Query: 610 NWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
+W R+R +M+ M + GCSW+ + ++ F D SH + +Y LA+ +G +
Sbjct: 629 SWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECLALLSGHM 687
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 119/512 (23%), Positives = 216/512 (42%), Gaps = 117/512 (22%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R L L+ H + +K G L + L+ +Y K + L +R++F +MP +++ +WN+
Sbjct: 220 RLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNS 279
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I + D K + N M+ E
Sbjct: 280 MIKGYVAKGDSKSCVEIL-----------NRMII-----------------------EGT 305
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
R + T+TS L C + N+ G+ +H +++++ +A + SLID+Y KC
Sbjct: 306 RPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKC-------- 357
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
GE +A +T + + + + A SWN +IS Y+ G+
Sbjct: 358 ------------------------GEANLA-ETVFSKTQKDVAESWNVMISSYISVGNWF 392
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
+ ++++ +M GV+ + TF S L AC L ++ K+IH + ++ L ++ + S ++
Sbjct: 393 KAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALL 452
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D+Y KC GN +EA R F+S+ +K+VV WT
Sbjct: 453 DMYSKC-------------------------------GNEKEAFRIFNSIPKKDVVSWTV 481
Query: 362 LFSGY-VKAQNCEAL--FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
+ S Y Q EAL FD + +F G+ D + L+ +L AC + G + + +
Sbjct: 482 MISAYGSHGQPREALYQFDEMQKF----GLKPDGVTLLAVLSACGHAGLIDEGLKFFSQM 537
Query: 419 L-RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD---LVLYNVMIACYAHHGH- 473
+ G++ + S ++D+ + G + A I Q E +L + AC H H
Sbjct: 538 RSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHS 597
Query: 474 --EEKAILLFEEMLEKGIKPDAVTFVAILSAF 503
+ A LL E + DA T++ + + +
Sbjct: 598 LGDRIARLLVENYPD-----DASTYMVLFNLY 624
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 157/353 (44%), Gaps = 37/353 (10%)
Query: 222 NDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGV-RWNEHTFASALSACCGLRNVKCAKE 280
+D WN+L+SGY +N + L++F R+ + + TF + + A L +
Sbjct: 69 SDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRM 128
Query: 281 IHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGN 340
IH+ V+K+G + + V+S +V +Y K F++
Sbjct: 129 IHTLVVKSGYVCDVVVASSLVGMYAK-------------------FNL------------ 157
Query: 341 MEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLG 400
E + + FD + E++V W + S + ++ E +L + G +++ L + +
Sbjct: 158 FENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGR-MESSGFEPNSVSLTVAIS 216
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL 460
AC+ L GKEIH ++ G ++D+ + S LVDMY KC + A +FQ + LV
Sbjct: 217 ACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVA 276
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
+N MI Y G + + + M+ +G +P T +IL A ++ G K+ +
Sbjct: 277 WNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHG-KFIHGYV 335
Query: 521 ADYKISPETDHYACMIDLY---GRANQLEKAIEFMKSIPTEEDAVILGSFLNV 570
++ + +IDLY G AN E + E V++ S+++V
Sbjct: 336 IRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISV 388
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 122/286 (42%), Gaps = 35/286 (12%)
Query: 273 RNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMI 332
++++ K +H +L GL + + +++VY C++ A + V +F I S
Sbjct: 18 KSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSA------RHVFENFDIRS-- 69
Query: 333 VGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDA 392
+V +W +L SGY K ++ + V D+
Sbjct: 70 ----------------------DVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDS 107
Query: 393 LILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQN 452
++ A G+ IH +++ G D + S+LV MY+K + +F
Sbjct: 108 FTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDE 167
Query: 453 FIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMG 512
ERD+ +N +I+C+ G EKA+ LF M G +P++V+ +SA +E G
Sbjct: 168 MPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERG 227
Query: 513 EKYFNSMTADYKISPETDHY--ACMIDLYGRANQLEKAIEFMKSIP 556
++ K E D Y + ++D+YG+ + LE A E + +P
Sbjct: 228 KEIHRKCV---KKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMP 270
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 188/622 (30%), Positives = 312/622 (50%), Gaps = 80/622 (12%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
E N F NT+++ K L ++ L S +DLVT+N++L E +AL+
Sbjct: 233 ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQL-LEALEYLR 291
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSN-DASGFAVSSLIDMYS 171
EM E + DEFT++S L C L + G++LHA+ +K + D + F S+L+DMY
Sbjct: 292 EM--VLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYC 349
Query: 172 KCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLI 231
C+ RVF+G F R+ L WN +I
Sbjct: 350 NCKQVLSGRRVFDG----------------------------MFDRKIGL-----WNAMI 376
Query: 232 SGYVQNGDAEEGLKLFVRMGEN-GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL 290
+GY QN +E L LF+ M E+ G+ N T A + AC + IH +V+K GL
Sbjct: 377 AGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL 436
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
+ FV + ++D+Y + G ++ A R F
Sbjct: 437 DRDRFVQNTLMDMYSRL-------------------------------GKIDIAMRIFGK 465
Query: 351 LTEKNVVVWTALFSGYVKAQNCEALFDLL----------SEFVTKEGVVTDALILVILLG 400
+ ++++V W + +GYV +++ E LL S+ ++ + +++ L+ +L
Sbjct: 466 MEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILP 525
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL 460
+CA +AL GKEIHAY ++ + D + S LVDMY+KCG + + +F +++++
Sbjct: 526 SCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVIT 585
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
+NV+I Y HG+ ++AI L M+ +G+KP+ VTF+++ +A H G V+ G + F M
Sbjct: 586 WNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMK 645
Query: 521 ADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE-EDAVILGSFLNVCRLNRNAEL 579
DY + P +DHYAC++DL GRA ++++A + M +P + A S L R++ N E+
Sbjct: 646 PDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEI 705
Query: 580 AGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEH 639
A + L++LE N + YV LAN+Y++ G W + +R+ M+ + GCSW+
Sbjct: 706 GEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGD 765
Query: 640 EIHIFTVGDVSHPKTNAIYSVL 661
E+H F GD SHP++ + L
Sbjct: 766 EVHKFVAGDSSHPQSEKLSGYL 787
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 141/578 (24%), Positives = 251/578 (43%), Gaps = 126/578 (21%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
++ + L + + HV G+ T+ N L+++Y K K+FD + ERN SWN
Sbjct: 110 LQDMELGKQIHAHVYKFGYGVDSVTVA-NTLVNLYRKCGDFGAVYKVFDRISERNQVSWN 168
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
++I S LC + E +E AL+ F M DE+
Sbjct: 169 SLI----------------------------SSLCSF---EKWEM-ALEAFRCM--LDEN 194
Query: 121 IRMDEFTVTSTLNLCVKLL---NVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYE 177
+ FT+ S + C L + G+Q+HA+ ++ + + F +++L+ MY K
Sbjct: 195 VEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLR-KGELNSFIINTLVAMYGKL---- 249
Query: 178 EACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQN 237
+ ++ L +F + D V+WNT++S QN
Sbjct: 250 -------------------------GKLASSKVLLGSFGGR----DLVTWNTVLSSLCQN 280
Query: 238 GDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG-LISNPFV 296
E L+ M GV +E T +S L AC L ++ KE+H++ LKNG L N FV
Sbjct: 281 EQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFV 340
Query: 297 SSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNV 356
S +VD+YC C+ +L G RR FD + ++ +
Sbjct: 341 GSALVDMYCNCKQ--------VLSG-----------------------RRVFDGMFDRKI 369
Query: 357 VVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHA 416
+W A+ +GY + ++ + L G++ ++ + ++ AC A + IH
Sbjct: 370 GLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHG 429
Query: 417 YILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
++++ G+ D+ + +TL+DMYS+ G + A IF +RDLV +N MI Y H E
Sbjct: 430 FVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHED 489
Query: 477 AILLFEEM------LEKG-----IKPDAVTFVAILSAFRHCGSVEMGEKYF-----NSMT 520
A+LL +M + KG +KP+++T + IL + ++ G++ N++
Sbjct: 490 ALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLA 549
Query: 521 ADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE 558
D + + ++D+Y + L+ + + IP +
Sbjct: 550 TDVAVG------SALVDMYAKCGCLQMSRKVFDQIPQK 581
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 122/273 (44%), Gaps = 78/273 (28%)
Query: 7 KEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISAC 66
KEA+ H +K GL N L+ +YS+ + + ++F +M +R++ +WNT+I+
Sbjct: 424 KEAI--HGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMIT-- 479
Query: 67 IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI----- 121
GY+ +E +E DAL L +MQ+ + +
Sbjct: 480 -----------------------------GYVFSEHHE-DALLLLHKMQNLERKVSKGAS 509
Query: 122 ----RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV-SSLIDMYSKCRCY 176
+ + T+ + L C L + G+++HA+ +K +N A+ AV S+L+DMY+KC C
Sbjct: 510 RVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIK-NNLATDVAVGSALVDMYAKCGC- 567
Query: 177 EEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQ 236
++M+ K F + P+ N ++WN +I Y
Sbjct: 568 -------------------------------LQMSRKVFDQIPQKN-VITWNVIIMAYGM 595
Query: 237 NGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
+G+ +E + L M GV+ NE TF S +AC
Sbjct: 596 HGNGQEAIDLLRMMMVQGVKPNEVTFISVFAAC 628
>gi|242038427|ref|XP_002466608.1| hypothetical protein SORBIDRAFT_01g010975 [Sorghum bicolor]
gi|241920462|gb|EER93606.1| hypothetical protein SORBIDRAFT_01g010975 [Sorghum bicolor]
Length = 752
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 193/605 (31%), Positives = 320/605 (52%), Gaps = 12/605 (1%)
Query: 24 TTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP 83
++ T + ++ + K + +R+LFD MPE++V S+ T++ A +K +K A L++ P
Sbjct: 153 SSFTYDFMVSEHVKAGDIASARRLFDGMPEKSVVSYTTMVDALMKRGSVKDAVKLYERCP 212
Query: 84 HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGF 143
+ + +M+ G++ E ++ DA +F +M +R + T+ + CV
Sbjct: 213 LYSVAFFTAMIAGFVRNELHK-DAFPVFRKMLRCS--VRPNVVTLICVIKACVGAGEFDL 269
Query: 144 GRQLHAFMVKTSNDASGFAV-SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAAC 202
+ +K + V +SLI +Y + A RVF+ E +++S A++
Sbjct: 270 AMGVVGLAIKWNLFEKSIEVHNSLITLYLRMGDAAAAHRVFDD-MEVRDVVSWTALLDVY 328
Query: 203 CREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTF 262
G++E A + PE N+ VSW+TLI+ + Q GD+ E LKL+ +M G R N F
Sbjct: 329 AELGDLEGARRVLDAMPERNE-VSWSTLIARHEQKGDSAEALKLYSQMLAEGCRPNISCF 387
Query: 263 ASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGV 322
+S LSAC L +++ IH+ LK G S+ FVSS ++D+YCKC+ A+ +
Sbjct: 388 SSVLSACATLHDLRGGTRIHANALKMGFSSSLFVSSSLIDMYCKCKQCTDAQRIFNSLPE 447
Query: 323 RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF 382
+N+ +S+I GYS G M EA F + +N W + SGY + + D L+ F
Sbjct: 448 KNTVCWNSLISGYSWNGKMVEAEELFKKMPARNAASWNTMISGYAENRR---FGDALNYF 504
Query: 383 --VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC 440
+ G + + L +L ACA +L GK +HA I+++G++ + + + L DMY+K
Sbjct: 505 CAMLASGQIPGEITLSSVLLACANLCSLEMGKMVHAEIVKLGIEDNIFMGTALSDMYAKS 564
Query: 441 GNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAIL 500
G++ + +F E++ + + M+ A +G E++ILLFE M+ I P+ TF+AIL
Sbjct: 565 GDLDSSRRMFYQMPEKNNITWTAMVQGLAENGFAEESILLFENMIANRIAPNEHTFLAIL 624
Query: 501 SAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEED 560
A HCG VE YF +M A + I P+ HY CM+D+ RA +L +A E + +P++ D
Sbjct: 625 FACSHCGLVEQAIHYFETMQA-HGIPPKDKHYTCMVDVLARAGRLPEAEELLMKVPSKLD 683
Query: 561 AVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQ 620
S L+ C RN E+ A +KL LE +N A YV L+N+YA+ G W + R
Sbjct: 684 TSSWSSLLSACNTYRNKEIGERAAKKLHELEKDNTAGYVLLSNMYASCGKWKDAAETRIL 743
Query: 621 MRGMK 625
M+G +
Sbjct: 744 MQGPR 748
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 166/352 (47%), Gaps = 41/352 (11%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L+ H A+K G + + ++ LI +Y K +++++F+ +PE+N WN++IS
Sbjct: 399 DLRGGTRIHANALKMGFSSSLFVSSSLIDMYCKCKQCTDAQRIFNSLPEKNTVCWNSLIS 458
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
+ + +A LF P ++ ++N+M+ GY + DAL F M ++ +
Sbjct: 459 GYSWNGKMVEAEELFKKMPARNAASWNTMISGYAENRRF-GDALNYFCAMLASGQIP--G 515
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
E T++S L C L ++ G+ +HA +VK + + F ++L DMY+K
Sbjct: 516 EITLSSVLLACANLCSLEMGKMVHAEIVKLGIEDNIFMGTALSDMYAK------------ 563
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
G+++ + + F++ PE N+ ++W ++ G +NG AEE +
Sbjct: 564 --------------------SGDLDSSRRMFYQMPEKNN-ITWTAMVQGLAENGFAEESI 602
Query: 245 KLFVRMGENGVRWNEHTFASALSAC--CGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
LF M N + NEHTF + L AC CGL V+ A + +G+ + +VD
Sbjct: 603 LLFENMIANRIAPNEHTFLAILFACSHCGL--VEQAIHYFETMQAHGIPPKDKHYTCMVD 660
Query: 303 VYCKCENMNYAESMLL-LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
V + + AE +L+ + ++ S SS++ + N E R L E
Sbjct: 661 VLARAGRLPEAEELLMKVPSKLDTSSWSSLLSACNTYRNKEIGERAAKKLHE 712
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/393 (20%), Positives = 160/393 (40%), Gaps = 74/393 (18%)
Query: 281 IHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESML---LLKGVRNSFSISSMIVGYSL 337
+H+ L++GL ++ V+S ++ Y + + +SF+ M+ +
Sbjct: 107 LHAHTLRSGLAADRSVASNLLTAYAAFARAADRDRAFRDCVSADAASSFTYDFMVSEHVK 166
Query: 338 QGNMEEARRHFDSLTEKNVVVW-------------------------------TALFSGY 366
G++ ARR FD + EK+VV + TA+ +G+
Sbjct: 167 AGDIASARRLFDGMPEKSVVSYTTMVDALMKRGSVKDAVKLYERCPLYSVAFFTAMIAGF 226
Query: 367 VKAQNCEALFDLLSEFV---TKEGVVTDALILVILLGACALQAAL------------HPG 411
V+ + + F + + + + VVT ++ +GA A+
Sbjct: 227 VRNELHKDAFPVFRKMLRCSVRPNVVTLICVIKACVGAGEFDLAMGVVGLAIKWNLFEKS 286
Query: 412 KEIHAYI----LRMGVQMDKKLI------------STLVDMYSKCGNMTYAEIIFQNFIE 455
E+H + LRMG + + L+D+Y++ G++ A + E
Sbjct: 287 IEVHNSLITLYLRMGDAAAAHRVFDDMEVRDVVSWTALLDVYAELGDLEGARRVLDAMPE 346
Query: 456 RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVE--MGE 513
R+ V ++ +IA + G +A+ L+ +ML +G +P+ F ++LSA C ++ G
Sbjct: 347 RNEVSWSTLIARHEQKGDSAEALKLYSQMLAEGCRPNISCFSSVLSA---CATLHDLRGG 403
Query: 514 KYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRL 573
++ S + +ID+Y + Q A S+P E++ V S ++
Sbjct: 404 TRIHANALKMGFSSSLFVSSSLIDMYCKCKQCTDAQRIFNSLP-EKNTVCWNSLIS--GY 460
Query: 574 NRNAELAGEAEEKLLRLEGNNKARYVQLANVYA 606
+ N ++ EAEE ++ N A + + + YA
Sbjct: 461 SWNGKMV-EAEELFKKMPARNAASWNTMISGYA 492
>gi|296084001|emb|CBI24389.3| unnamed protein product [Vitis vinifera]
Length = 665
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 197/665 (29%), Positives = 337/665 (50%), Gaps = 52/665 (7%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYS---KHNL---LRESRKLFDEMPERNVFSWNTIISAC 66
H+ + + T TT L+H +S KH L+E+ +F MP +N SW +++A
Sbjct: 13 HLSRLNSSNTQGNRTTKFLVHCHSQITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAY 72
Query: 67 IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYE-ADALKLFIEMQSADEHIRMDE 125
++ + +AR +F+ P + +YN+M+ Y + +A KLF EM+ E
Sbjct: 73 YENGHIAKARKMFEKMPQRTTASYNAMITAYTRSNPMMIGEASKLFAEMR---------E 123
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVS-SLIDMYSKCRCYEEACRVFE 184
S + L G ++T + S +LI Y K EEA R+FE
Sbjct: 124 RNSISYAAMITGLARAGMVDNAEELYLETPVEWRDPVCSNALISGYLKVGRLEEATRIFE 183
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
G E ++IS ++MV C++G++ A + F R PE N V+W +I G+++ G E G
Sbjct: 184 GMGER-DVISWSSMVDGYCKKGKIGHARELFERMPERN-VVTWTAMIDGHMKMGCYEVGF 241
Query: 245 KLFVRMGENG-VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
LF+RM + G V+ N T AC K ++H V + G + F+ + I+ +
Sbjct: 242 GLFLRMRKEGFVKVNPTTLTVMFEACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIM 301
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
YC+ + A + + ++ S +++I GY +EE F+ +K+V+ WT +
Sbjct: 302 YCRFSFVVEARKIFDMMNRKDVVSWNALIAGYVQNDEVEEGYVLFEKTQQKDVISWTTMI 361
Query: 364 SGY---------------VKAQNCEALFDLLSEFVT---------------KEGVVTDAL 393
+G+ + Q+ A ++S FV ++ V + L
Sbjct: 362 TGFSNKGKMGKSIELFRMMPKQDDIAWTAVISGFVGNGEYEEAIYWFIEMLRKVVRPNPL 421
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF 453
L +L A A A L+ G +IH +++MG++ D + ++LV MY+KCGN+ IF +
Sbjct: 422 TLSSVLSASAGLATLNQGLQIHTLVVKMGMEFDLSIQNSLVSMYTKCGNVADGHQIFTSI 481
Query: 454 IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
++V +N MI +A +G E+A+ LF +ML +G KP+ +TF+ +LSA H G +E G
Sbjct: 482 NSPNIVSFNSMITGFAQNGFGEEALELFHKMLNEGQKPNEITFLGVLSACTHVGLLEQGW 541
Query: 514 KYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRL 573
YF SM + Y+I P HYAC++DL GRA L+ AI+ ++S+P E + + G+ L R+
Sbjct: 542 NYFKSMKSLYQIEPGPHHYACIVDLLGRAGFLDDAIDLIRSMPCEPHSGVWGALLGASRI 601
Query: 574 NRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKG-NRFAGC 632
+ ++A A +++ +LE +N A Y L+ +Y++ G + ++R +G+KG + AG
Sbjct: 602 HLRLDVAKLAAQQIFKLEPDNAAPYAVLSFLYSSAGRNRDSEQVR-MAQGLKGVKKSAGY 660
Query: 633 SWVYV 637
SW+ V
Sbjct: 661 SWIIV 665
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 128/293 (43%), Gaps = 63/293 (21%)
Query: 7 KEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISAC 66
KE + H + G N +I +Y + + + E+RK+FD M ++V SWN +I+
Sbjct: 274 KEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARKIFDMMNRKDVVSWNALIAGY 333
Query: 67 IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE------- 119
+++ ++++ LF+ + KD++++ +M+ G+ N +G +++LF M D+
Sbjct: 334 VQNDEVEEGYVLFEKTQQKDVISWTTMITGFSN-KGKMGKSIELFRMMPKQDDIAWTAVI 392
Query: 120 ----------------------HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSND 157
+R + T++S L+ L + G Q+H +VK +
Sbjct: 393 SGFVGNGEYEEAIYWFIEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQIHTLVVKMGME 452
Query: 158 ASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWR 217
+SL+ MY+KC + ++F N++S N+M
Sbjct: 453 FDLSIQNSLVSMYTKCGNVADGHQIFTSINSP-NIVSFNSM------------------- 492
Query: 218 QPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACC 270
I+G+ QNG EE L+LF +M G + NE TF LSAC
Sbjct: 493 -------------ITGFAQNGFGEEALELFHKMLNEGQKPNEITFLGVLSACT 532
>gi|8778977|gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
from Arabidopsis thaliana BAC F28A21 gi|T04867 and
contains multiple PPR PF|01535 repeats. EST gb|AI999742
comes from this gene. This gene may be cut off, partial
[Arabidopsis thaliana]
Length = 757
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 183/658 (27%), Positives = 339/658 (51%), Gaps = 55/658 (8%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + +K+G + +LI YS +N ++ + +P+ ++S++++I A K+
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
Q+ +F ++F D H+ + F V
Sbjct: 98 TQSIGVFS----------------------------RMFSHGLIPDSHVLPNLFKV---- 125
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C +L G+Q+H + D F S+ MY +C +A +VF+ +++ ++
Sbjct: 126 --CAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDK-DV 182
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELN---DAVSWNTLISGYVQNGDAEEGLKLFVR 249
++ +A++ A R+G +E ++ + VSWN ++SG+ ++G +E + +F +
Sbjct: 183 VTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQK 242
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
+ G ++ T +S L + + + IH +V+K GL+ + V S ++D+Y K +
Sbjct: 243 IHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGH 302
Query: 310 MNYAESM-----LLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK----NVVVWT 360
+ S+ ++ GV N++ I G S G +++A F+ E+ NVV WT
Sbjct: 303 VYGIISLFNQFEMMEAGVCNAY-----ITGLSRNGLVDKALEMFELFKEQTMELNVVSWT 357
Query: 361 ALFSGYVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
++ +G + ++ EAL +L E GV + + + +L AC AAL G+ H + +
Sbjct: 358 SIIAGCAQNGKDIEAL-ELFREMQVA-GVKPNHVTIPSMLPACGNIAALGHGRSTHGFAV 415
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
R+ + + + S L+DMY+KCG + ++I+F ++LV +N ++ ++ HG ++ +
Sbjct: 416 RVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMS 475
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
+FE ++ +KPD ++F ++LSA G + G KYF M+ +Y I P +HY+CM++L
Sbjct: 476 IFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLL 535
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYV 599
GRA +L++A + +K +P E D+ + G+ LN CRL N +LA A EKL LE N YV
Sbjct: 536 GRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYV 595
Query: 600 QLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
L+N+YAA+G W E+ IR +M + + GCSW+ V++ ++ GD SHP+ + I
Sbjct: 596 LLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQI 653
>gi|359479080|ref|XP_003632211.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial [Vitis vinifera]
Length = 744
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 197/665 (29%), Positives = 337/665 (50%), Gaps = 52/665 (7%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYS---KHNL---LRESRKLFDEMPERNVFSWNTIISAC 66
H+ + + T TT L+H +S KH L+E+ +F MP +N SW +++A
Sbjct: 92 HLSRLNSSNTQGNRTTKFLVHCHSQITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAY 151
Query: 67 IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYE-ADALKLFIEMQSADEHIRMDE 125
++ + +AR +F+ P + +YN+M+ Y + +A KLF EM+ E
Sbjct: 152 YENGHIAKARKMFEKMPQRTTASYNAMITAYTRSNPMMIGEASKLFAEMR---------E 202
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVS-SLIDMYSKCRCYEEACRVFE 184
S + L G ++T + S +LI Y K EEA R+FE
Sbjct: 203 RNSISYAAMITGLARAGMVDNAEELYLETPVEWRDPVCSNALISGYLKVGRLEEATRIFE 262
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
G E ++IS ++MV C++G++ A + F R PE N V+W +I G+++ G E G
Sbjct: 263 GMGER-DVISWSSMVDGYCKKGKIGHARELFERMPERN-VVTWTAMIDGHMKMGCYEVGF 320
Query: 245 KLFVRMGENG-VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
LF+RM + G V+ N T AC K ++H V + G + F+ + I+ +
Sbjct: 321 GLFLRMRKEGFVKVNPTTLTVMFEACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIM 380
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
YC+ + A + + ++ S +++I GY +EE F+ +K+V+ WT +
Sbjct: 381 YCRFSFVVEARKIFDMMNRKDVVSWNALIAGYVQNDEVEEGYVLFEKTQQKDVISWTTMI 440
Query: 364 SGY---------------VKAQNCEALFDLLSEFV---------------TKEGVVTDAL 393
+G+ + Q+ A ++S FV ++ V + L
Sbjct: 441 TGFSNKGKMGKSIELFRMMPKQDDIAWTAVISGFVGNGEYEEAIYWFIEMLRKVVRPNPL 500
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF 453
L +L A A A L+ G +IH +++MG++ D + ++LV MY+KCGN+ IF +
Sbjct: 501 TLSSVLSASAGLATLNQGLQIHTLVVKMGMEFDLSIQNSLVSMYTKCGNVADGHQIFTSI 560
Query: 454 IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
++V +N MI +A +G E+A+ LF +ML +G KP+ +TF+ +LSA H G +E G
Sbjct: 561 NSPNIVSFNSMITGFAQNGFGEEALELFHKMLNEGQKPNEITFLGVLSACTHVGLLEQGW 620
Query: 514 KYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRL 573
YF SM + Y+I P HYAC++DL GRA L+ AI+ ++S+P E + + G+ L R+
Sbjct: 621 NYFKSMKSLYQIEPGPHHYACIVDLLGRAGFLDDAIDLIRSMPCEPHSGVWGALLGASRI 680
Query: 574 NRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKG-NRFAGC 632
+ ++A A +++ +LE +N A Y L+ +Y++ G + ++R +G+KG + AG
Sbjct: 681 HLRLDVAKLAAQQIFKLEPDNAAPYAVLSFLYSSAGRNRDSEQVR-MAQGLKGVKKSAGY 739
Query: 633 SWVYV 637
SW+ V
Sbjct: 740 SWIIV 744
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 128/293 (43%), Gaps = 63/293 (21%)
Query: 7 KEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISAC 66
KE + H + G N +I +Y + + + E+RK+FD M ++V SWN +I+
Sbjct: 353 KEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARKIFDMMNRKDVVSWNALIAGY 412
Query: 67 IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE------- 119
+++ ++++ LF+ + KD++++ +M+ G+ N +G +++LF M D+
Sbjct: 413 VQNDEVEEGYVLFEKTQQKDVISWTTMITGFSN-KGKMGKSIELFRMMPKQDDIAWTAVI 471
Query: 120 ----------------------HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSND 157
+R + T++S L+ L + G Q+H +VK +
Sbjct: 472 SGFVGNGEYEEAIYWFIEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQIHTLVVKMGME 531
Query: 158 ASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWR 217
+SL+ MY+KC + ++F N++S N+M
Sbjct: 532 FDLSIQNSLVSMYTKCGNVADGHQIFTSINSP-NIVSFNSM------------------- 571
Query: 218 QPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACC 270
I+G+ QNG EE L+LF +M G + NE TF LSAC
Sbjct: 572 -------------ITGFAQNGFGEEALELFHKMLNEGQKPNEITFLGVLSACT 611
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 183/658 (27%), Positives = 339/658 (51%), Gaps = 55/658 (8%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + +K+G + +LI YS +N ++ + +P+ ++S++++I A K+
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
Q+ +F ++F D H+ + F V
Sbjct: 98 TQSIGVFS----------------------------RMFSHGLIPDSHVLPNLFKV---- 125
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C +L G+Q+H + D F S+ MY +C +A +VF+ +++ ++
Sbjct: 126 --CAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDK-DV 182
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELN---DAVSWNTLISGYVQNGDAEEGLKLFVR 249
++ +A++ A R+G +E ++ + VSWN ++SG+ ++G +E + +F +
Sbjct: 183 VTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQK 242
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
+ G ++ T +S L + + + IH +V+K GL+ + V S ++D+Y K +
Sbjct: 243 IHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGH 302
Query: 310 MNYAESM-----LLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK----NVVVWT 360
+ S+ ++ GV N++ I G S G +++A F+ E+ NVV WT
Sbjct: 303 VYGIISLFNQFEMMEAGVCNAY-----ITGLSRNGLVDKALEMFELFKEQTMELNVVSWT 357
Query: 361 ALFSGYVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
++ +G + ++ EAL +L E GV + + + +L AC AAL G+ H + +
Sbjct: 358 SIIAGCAQNGKDIEAL-ELFREMQVA-GVKPNHVTIPSMLPACGNIAALGHGRSTHGFAV 415
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
R+ + + + S L+DMY+KCG + ++I+F ++LV +N ++ ++ HG ++ +
Sbjct: 416 RVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMS 475
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
+FE ++ +KPD ++F ++LSA G + G KYF M+ +Y I P +HY+CM++L
Sbjct: 476 IFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLL 535
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYV 599
GRA +L++A + +K +P E D+ + G+ LN CRL N +LA A EKL LE N YV
Sbjct: 536 GRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYV 595
Query: 600 QLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
L+N+YAA+G W E+ IR +M + + GCSW+ V++ ++ GD SHP+ + I
Sbjct: 596 LLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQI 653
>gi|449448940|ref|XP_004142223.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 192/673 (28%), Positives = 328/673 (48%), Gaps = 78/673 (11%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNV----FSWNTII 63
+AL + + G+ +T +I +++ LR +L + N+ F N ++
Sbjct: 245 KALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALL 304
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
+ + L+ + +LF++ P D +NSM+ YI G+ A+A+ LFI+M+ E I+
Sbjct: 305 NMYSDNGSLESSWALFNAVPTSDAALWNSMISSYI-GFGFHAEAIALFIKMRL--ERIKE 361
Query: 124 DEFTVTSTLNLCVKLLNVG--FGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
D T+ L+LC L N G +GR LHA +K+ + + ++L+ MY K A
Sbjct: 362 DVRTIAIMLSLCNDL-NDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQY 420
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
VFE + D +SWNT+IS + Q+
Sbjct: 421 VFE---------------------------------KMRGLDVISWNTMISAFAQSMFRA 447
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
+ +LF+ M E+ +++N +T S L+ C ++ + IH + +KNGL N +++ +
Sbjct: 448 KAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLT 507
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
++Y C G+ A F ++++V W +
Sbjct: 508 EMYINC-------------------------------GDERAATNMFTRCPQRDLVSWNS 536
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR- 420
L S Y+K N L + +++ + +++ ++ +L +C A L G+ +HAY R
Sbjct: 537 LISSYIKNDNAGKALLLFNHMISE--LEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRR 594
Query: 421 -MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
+ ++MD L + + MY++CG + YAE IF R +V +N MI Y HG A L
Sbjct: 595 EVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATL 654
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
F +ML+ G KP+ V+F ++LSA H G G + F+SM D+ I+P+ HY CM+DL
Sbjct: 655 AFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLL 714
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYV 599
GR +AI F+ S+P E DA I + L+ C++ N +L KL+ LE +N ++
Sbjct: 715 GRGGHFSEAIAFINSMPIEPDASIWRALLSSCQIKSNNKLLETIFGKLVELEPSNPGNFI 774
Query: 600 QLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYS 659
L+N+YAA G W+E+ +IRK +R + G SW+ + +++H FT DV HP++ IY
Sbjct: 775 LLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIVIGNQVHHFTATDVLHPQSERIYE 834
Query: 660 VLAIFTGELYEIA 672
L T + ++
Sbjct: 835 NLNSLTSLIRDLG 847
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 117/446 (26%), Positives = 197/446 (44%), Gaps = 77/446 (17%)
Query: 108 LKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFM--VKTSNDASGFAVSS 165
L + +M+S I D T+ L C +L +G G ++H+F+ + ND ++
Sbjct: 45 LSTYTQMESLG--ITPDSATMPLVLKACGRLNAIGNGVRIHSFIRGLDLINDVR--VGTA 100
Query: 166 LIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAV 225
L+D Y KC EA +VF +EM PE D V
Sbjct: 101 LVDFYCKCGLVAEASKVF------------------------VEM--------PE-RDLV 127
Query: 226 SWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWV 285
SWN LISGYV +E + LFV M + G+ N T + L AC + ++ +EIH +
Sbjct: 128 SWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYC 187
Query: 286 LKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEAR 345
L+NGL +D Y + + +VG+ ++ + +
Sbjct: 188 LRNGLFD--------MDAY-----------------------VGTALVGFYMRFDAVLSH 216
Query: 346 RHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQ 405
R F + +N+V W A+ +G++ +C L S + EG+ DA+ +++++ ACA
Sbjct: 217 RVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLI-EGIKFDAVTMLVVIQACAEY 275
Query: 406 AALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMI 465
L G ++H ++ + D +++ L++MYS G++ + +F D L+N MI
Sbjct: 276 GCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMI 335
Query: 466 ACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTAD-YK 524
+ Y G +AI LF +M + IK D T +LS C + G + + A K
Sbjct: 336 SSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSL---CNDLNDGSIWGRGLHAHAMK 392
Query: 525 ISPETDHYA--CMIDLYGRANQLEKA 548
E D Y ++ +Y + NQ+ A
Sbjct: 393 SGIELDAYLGNALLSMYVKHNQITAA 418
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 155/343 (45%), Gaps = 35/343 (10%)
Query: 221 LNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKE 280
+N + WN++I + + + L + +M G+ + T L AC L +
Sbjct: 22 VNVSKDWNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVR 81
Query: 281 IHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGN 340
IHS++ LI++ V + +VD YCKC G
Sbjct: 82 IHSFIRGLDLINDVRVGTALVDFYCKC-------------------------------GL 110
Query: 341 MEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLG 400
+ EA + F + E+++V W AL SGYV C LL + K G+ ++ +V LL
Sbjct: 111 VAEASKVFVEMPERDLVSWNALISGYVGCL-CYKEAVLLFVEMKKAGLTPNSRTVVALLL 169
Query: 401 ACALQAALHPGKEIHAYILRMGV-QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLV 459
AC L G+EIH Y LR G+ MD + + LV Y + + + +F + R++V
Sbjct: 170 ACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRF-DAVLSHRVFSLMLVRNIV 228
Query: 460 LYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSM 519
+N +I + + G KA+ L+ ML +GIK DAVT + ++ A G + +G + + +
Sbjct: 229 SWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQ-LHQL 287
Query: 520 TADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAV 562
+ + + ++++Y LE + ++PT + A+
Sbjct: 288 AIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAAL 330
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 104/474 (21%), Positives = 204/474 (43%), Gaps = 104/474 (21%)
Query: 31 LIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTY 90
L+ Y K L+ E+ K+F EMPER DLV++
Sbjct: 101 LVDFYCKCGLVAEASKVFVEMPER-------------------------------DLVSW 129
Query: 91 NSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAF 150
N+++ GY+ Y+ +A+ LF+EM+ A + + TV + L C ++L + G+++H +
Sbjct: 130 NALISGYVGCLCYK-EAVLLFVEMKKAG--LTPNSRTVVALLLACGEMLELRLGQEIHGY 186
Query: 151 MVKTS-NDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEME 209
++ D + ++L+ Y + RVF N++S NA
Sbjct: 187 CLRNGLFDMDAYVGTALVGFYMRFDAVLSH-RVFSLMLVR-NIVSWNA------------ 232
Query: 210 MALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
+I+G++ GD + LKL+ M G++++ T + AC
Sbjct: 233 --------------------IITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQAC 272
Query: 270 CGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSIS 329
++ ++H +K LI++ F+ + ++++
Sbjct: 273 AEYGCLRLGMQLHQLAIKFNLINDLFILNALLNM-------------------------- 306
Query: 330 SMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK-AQNCEALFDLLSEFVTKEGV 388
YS G++E + F+++ + +W ++ S Y+ + EA+ + + E +
Sbjct: 307 -----YSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIK--MRLERI 359
Query: 389 VTDALILVILLGAC-ALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAE 447
D + I+L C L G+ +HA+ ++ G+++D L + L+ MY K +T A+
Sbjct: 360 KEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQ 419
Query: 448 IIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
+F+ D++ +N MI+ +A KA LF M E IK ++ T V++L+
Sbjct: 420 YVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLA 473
>gi|449502637|ref|XP_004161700.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 192/673 (28%), Positives = 328/673 (48%), Gaps = 78/673 (11%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNV----FSWNTII 63
+AL + + G+ +T +I +++ LR +L + N+ F N ++
Sbjct: 245 KALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALL 304
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
+ + L+ + +LF++ P D +NSM+ YI G+ A+A+ LFI+M+ E I+
Sbjct: 305 NMYSDNGSLESSWALFNAVPTSDAALWNSMISSYI-GFGFHAEAIALFIKMRL--ERIKE 361
Query: 124 DEFTVTSTLNLCVKLLNVG--FGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
D T+ L+LC L N G +GR LHA +K+ + + ++L+ MY K A
Sbjct: 362 DVRTIAIMLSLCNDL-NDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQY 420
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
VFE + D +SWNT+IS + Q+
Sbjct: 421 VFE---------------------------------KMRGLDVISWNTMISAFAQSMFRA 447
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
+ +LF+ M E+ +++N +T S L+ C ++ + IH + +KNGL N +++ +
Sbjct: 448 KAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLT 507
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
++Y C G+ A F ++++V W +
Sbjct: 508 EMYINC-------------------------------GDERAATNMFTRCPQRDLVSWNS 536
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR- 420
L S Y+K N L + +++ + +++ ++ +L +C A L G+ +HAY R
Sbjct: 537 LISSYIKNDNAGKALLLFNHMISE--LEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRR 594
Query: 421 -MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
+ ++MD L + + MY++CG + YAE IF R +V +N MI Y HG A L
Sbjct: 595 EVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATL 654
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
F +ML+ G KP+ V+F ++LSA H G G + F+SM D+ I+P+ HY CM+DL
Sbjct: 655 AFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLL 714
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYV 599
GR +AI F+ S+P E DA I + L+ C++ N +L KL+ LE +N ++
Sbjct: 715 GRGGHFSEAIAFINSMPIEPDASIWRALLSSCQIKSNNKLLETIFGKLVELEPSNPGNFI 774
Query: 600 QLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYS 659
L+N+YAA G W+E+ +IRK +R + G SW+ + +++H FT DV HP++ IY
Sbjct: 775 LLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIVIGNQVHHFTATDVLHPQSERIYE 834
Query: 660 VLAIFTGELYEIA 672
L T + ++
Sbjct: 835 NLNSLTSLIRDLG 847
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 171/370 (46%), Gaps = 43/370 (11%)
Query: 186 CTEEVNLISK----NAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
C ++LI+ A+V C+ G + A K F PE D VSWN LISGYV +
Sbjct: 85 CIRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPE-RDLVSWNALISGYVGCLCYK 143
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E + LFV M + G+ N T + L AC + ++ +EIH + L+NGL +
Sbjct: 144 EAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFD--------M 195
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D Y + + +VG+ ++ + + R F + +N+V W A
Sbjct: 196 DAY-----------------------VGTALVGFYMRFDAVLSHRVFSLMLVRNIVSWNA 232
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+ +G++ +C L S + EG+ DA+ +++++ ACA L G ++H ++
Sbjct: 233 IITGFLNVGDCAKALKLYSSMLI-EGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKF 291
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
+ D +++ L++MYS G++ + +F D L+N MI+ Y G +AI LF
Sbjct: 292 NLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALF 351
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTAD-YKISPETDHYA--CMIDL 538
+M + IK D T +LS C + G + + A K E D Y ++ +
Sbjct: 352 IKMRLERIKEDVRTIAIMLSL---CNDLNDGSIWGRGLHAHAMKSGIELDAYLGNALLSM 408
Query: 539 YGRANQLEKA 548
Y + NQ+ A
Sbjct: 409 YVKHNQITAA 418
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 154/343 (44%), Gaps = 35/343 (10%)
Query: 221 LNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKE 280
+N + WN++I + + + L + +M G+ + T L AC L +
Sbjct: 22 VNVSKDWNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVR 81
Query: 281 IHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGN 340
IHS + LI++ V + +VD YCKC G
Sbjct: 82 IHSCIRGLDLINDVRVGTALVDFYCKC-------------------------------GL 110
Query: 341 MEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLG 400
+ EA + F + E+++V W AL SGYV C LL + K G+ ++ +V LL
Sbjct: 111 VAEASKVFVEMPERDLVSWNALISGYVGCL-CYKEAVLLFVEMKKAGLTPNSRTVVALLL 169
Query: 401 ACALQAALHPGKEIHAYILRMGV-QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLV 459
AC L G+EIH Y LR G+ MD + + LV Y + + + +F + R++V
Sbjct: 170 ACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRF-DAVLSHRVFSLMLVRNIV 228
Query: 460 LYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSM 519
+N +I + + G KA+ L+ ML +GIK DAVT + ++ A G + +G + + +
Sbjct: 229 SWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQ-LHQL 287
Query: 520 TADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAV 562
+ + + ++++Y LE + ++PT + A+
Sbjct: 288 AIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAAL 330
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 104/474 (21%), Positives = 204/474 (43%), Gaps = 104/474 (21%)
Query: 31 LIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTY 90
L+ Y K L+ E+ K+F EMPER DLV++
Sbjct: 101 LVDFYCKCGLVAEASKVFVEMPER-------------------------------DLVSW 129
Query: 91 NSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAF 150
N+++ GY+ Y+ +A+ LF+EM+ A + + TV + L C ++L + G+++H +
Sbjct: 130 NALISGYVGCLCYK-EAVLLFVEMKKAG--LTPNSRTVVALLLACGEMLELRLGQEIHGY 186
Query: 151 MVKTS-NDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEME 209
++ D + ++L+ Y + RVF N++S NA
Sbjct: 187 CLRNGLFDMDAYVGTALVGFYMRFDAVLSH-RVFSLMLVR-NIVSWNA------------ 232
Query: 210 MALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
+I+G++ GD + LKL+ M G++++ T + AC
Sbjct: 233 --------------------IITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQAC 272
Query: 270 CGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSIS 329
++ ++H +K LI++ F+ + ++++
Sbjct: 273 AEYGCLRLGMQLHQLAIKFNLINDLFILNALLNM-------------------------- 306
Query: 330 SMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK-AQNCEALFDLLSEFVTKEGV 388
YS G++E + F+++ + +W ++ S Y+ + EA+ + + E +
Sbjct: 307 -----YSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIK--MRLERI 359
Query: 389 VTDALILVILLGAC-ALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAE 447
D + I+L C L G+ +HA+ ++ G+++D L + L+ MY K +T A+
Sbjct: 360 KEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQ 419
Query: 448 IIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
+F+ D++ +N MI+ +A KA LF M E IK ++ T V++L+
Sbjct: 420 YVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLA 473
>gi|297808809|ref|XP_002872288.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318125|gb|EFH48547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 690
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 187/658 (28%), Positives = 322/658 (48%), Gaps = 102/658 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K+G + + L+ +Y+K NL +S ++FDEMPER
Sbjct: 129 HTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPER------------------ 170
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
D+ ++N+++ + G AL+LF M+ +D + ++T +
Sbjct: 171 -------------DVASWNTVISSFYQ-RGDAEKALELFGRMERSD--FEPNSVSITVAI 214
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C +LL + G+++H +K + + S+L+DMY +C E A VF+
Sbjct: 215 SACSRLLCLERGKEIHRKYLKKEFELDEYVNSALVDMYGRCDFLEMAREVFQ-------- 266
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+M K+ V+WN++I GYV GD++ ++L RM
Sbjct: 267 ----------------QMRRKSL---------VAWNSMIRGYVARGDSKSCVELLNRMII 301
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G R ++ T S L AC RN+ K +H +V+++ + ++ +++ ++D+Y KC +
Sbjct: 302 EGTRPSQTTLTSILMACSRSRNLLHGKFVHGYVIRSVVDADIYINCSLIDLYFKCGEVKL 361
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVV-VWTALFSGYVKAQN 371
AE++ L T+K+VV W + SGYV N
Sbjct: 362 AETVFLK--------------------------------TQKDVVESWNVMISGYVSVGN 389
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
D+ + V+ GV D + +L C+ AAL GK+IH I ++ D+ L+S
Sbjct: 390 WFKAVDVYDQMVSV-GVQPDIVTFTSVLSTCSQLAALEKGKQIHLSISESRLETDELLLS 448
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
L+DMYSKCGN+ A IF + ++D+V + VMI+ Y HG +A+ F+EM + G+KP
Sbjct: 449 ALLDMYSKCGNVKEASRIFNSIPKKDVVSWTVMISAYGSHGQPREALYHFDEMQKFGVKP 508
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
D VTF+A+LSA H G ++ G KYF+ M + Y I + Y+C+ID+ GRA +L +A
Sbjct: 509 DGVTFLAVLSACGHAGLIDEGVKYFSQMRSKYGIEASIEQYSCLIDILGRAGRLLEAYGI 568
Query: 552 MKSIP-TEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGN 610
++ P T ++A +L + C L+R+ L + L+ ++ + Y L N+YA+ +
Sbjct: 569 LQQKPETRDNAELLSTLFCACCLHRDHLLGYTIAKLLVEKYPDDASTYTVLFNLYASGES 628
Query: 611 WAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
W R+R +M+ + + GCSW+ + ++ F D SHP+ +Y LA+ +G +
Sbjct: 629 WDAAKRVRLKMKEVGMRKKPGCSWIEMNEKVCHFFAEDRSHPQAENVYECLALLSGHM 686
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 178/439 (40%), Gaps = 83/439 (18%)
Query: 222 NDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGV-RWNEHTFASALSACCGLRNVKCAKE 280
+D WN+L+SGY +N + LK+F R+ + + T+ + + A L +
Sbjct: 68 SDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALGREFLGRM 127
Query: 281 IHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGN 340
IH+ V+K+G + + V+S +V +Y K F++
Sbjct: 128 IHTVVVKSGHVCDVVVASSLVGMYAK-------------------FNL------------ 156
Query: 341 MEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLG 400
E++ + FD + E++V W + S + + + E +L + + +++ + + +
Sbjct: 157 FEDSVQVFDEMPERDVASWNTVISSFYQRGDAEKALELFGR-MERSDFEPNSVSITVAIS 215
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL 460
AC+ L GKEIH L+ ++D+ + S LVDMY +C + A +FQ + LV
Sbjct: 216 ACSRLLCLERGKEIHRKYLKKEFELDEYVNSALVDMYGRCDFLEMAREVFQQMRRKSLVA 275
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA-----------FRH---- 505
+N MI Y G + + L M+ +G +P T +IL A F H
Sbjct: 276 WNSMIRGYVARGDSKSCVELLNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFVHGYVI 335
Query: 506 --------------------CGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQL 545
CG V++ E F D + + MI Y
Sbjct: 336 RSVVDADIYINCSLIDLYFKCGEVKLAETVFLKTQKDV-----VESWNVMISGYVSVGNW 390
Query: 546 EKAIEF---MKSIPTEEDAVILGSFLNVCR----LNRNAELAGEAEEKLLRLEGNNKARY 598
KA++ M S+ + D V S L+ C L + ++ E RLE ++
Sbjct: 391 FKAVDVYDQMVSVGVQPDIVTFTSVLSTCSQLAALEKGKQIHLSISES--RLE-TDELLL 447
Query: 599 VQLANVYAAEGNWAEMGRI 617
L ++Y+ GN E RI
Sbjct: 448 SALLDMYSKCGNVKEASRI 466
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 122/295 (41%), Gaps = 37/295 (12%)
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
S L C ++++ AK +H +L GL S+ + +++VY C++
Sbjct: 8 SLLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHC------------ 55
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSL-TEKNVVVWTALFSGYVKAQNCEALFDLLSEF 382
AR F+++ +V +W +L SGY K +
Sbjct: 56 -------------------SARLVFENIDIRSDVYIWNSLVSGYSKNSMFHDTLKVFKRL 96
Query: 383 VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGN 442
+ V D+ ++ A G+ IH +++ G D + S+LV MY+K
Sbjct: 97 LNCPICVPDSFTYPNVIKAYGALGREFLGRMIHTVVVKSGHVCDVVVASSLVGMYAKFNL 156
Query: 443 MTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
+ +F ERD+ +N +I+ + G EKA+ LF M +P++V+ +SA
Sbjct: 157 FEDSVQVFDEMPERDVASWNTVISSFYQRGDAEKALELFGRMERSDFEPNSVSITVAISA 216
Query: 503 FRHCGSVEMGEKYFNSMTADYKISPETDHY--ACMIDLYGRANQLEKAIEFMKSI 555
+E G++ K E D Y + ++D+YGR + LE A E + +
Sbjct: 217 CSRLLCLERGKEIHRKYL---KKEFELDEYVNSALVDMYGRCDFLEMAREVFQQM 268
>gi|334187761|ref|NP_197403.2| mitochondrial editing factor 18 [Arabidopsis thaliana]
gi|223635651|sp|P0C8Q8.1|PP394_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g19020, mitochondrial; Flags: Precursor
gi|332005257|gb|AED92640.1| mitochondrial editing factor 18 [Arabidopsis thaliana]
Length = 685
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 181/615 (29%), Positives = 327/615 (53%), Gaps = 12/615 (1%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + +K+GL N ++++Y+K LL ++ +F + + + S+N ++ ++S L
Sbjct: 64 HCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRL 123
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
A LFD P + V+Y +++ GY + ++A++LF EM++ I ++E T+ + +
Sbjct: 124 WDALKLFDVMPERSCVSYTTLIKGYAQNNQW-SEAMELFREMRNLG--IMLNEVTLATVI 180
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C L + R L + +K + F ++L+ MY C C ++A ++F+ E NL
Sbjct: 181 SACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPER-NL 239
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
++ N M+ + G +E A + F + E D VSW T+I G ++ +E L + M
Sbjct: 240 VTWNVMLNGYSKAGLIEQAEELFDQITE-KDIVSWGTMIDGCLRKNQLDEALVYYTEMLR 298
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAK--EIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
G++ +E LSA R+V +K ++H ++K G F+ + I+ Y ++
Sbjct: 299 CGMKPSEVMMVDLLSA--SARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDI 356
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
A + S +++I G+ G +E+AR FD +K++ W A+ SGY ++
Sbjct: 357 KLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSL 416
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
+ + L E ++ V DA+ +V + A + +L GK H Y+ + + L
Sbjct: 417 SPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLT 476
Query: 431 STLVDMYSKCGNMTYAEIIF---QNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
+ ++DMY+KCG++ A IF +N + +N +I A HGH + A+ L+ ++
Sbjct: 477 AAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSL 536
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEK 547
IKP+++TFV +LSA H G VE+G+ YF SM +D+ I P+ HY CM+DL G+A +LE+
Sbjct: 537 PIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEE 596
Query: 548 AIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAA 607
A E +K +P + D +I G L+ R + N E+A A +L ++ ++ V L+NVYA
Sbjct: 597 AKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYAD 656
Query: 608 EGNWAEMGRIRKQMR 622
G W ++ +R++MR
Sbjct: 657 AGRWEDVALVREEMR 671
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 138/484 (28%), Positives = 226/484 (46%), Gaps = 49/484 (10%)
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
E + S L C +V GRQ+H ++K+ D++G+ +S+++MY+KCR +A VF
Sbjct: 41 ERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFR 100
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
+++ S N MV R + ALK F PE VS+ TLI GY QN E +
Sbjct: 101 D-HAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPE-RSCVSYTTLIKGYAQNNQWSEAM 158
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
+LF M G+ NE T A+ +SAC L + + + S +K L FVS+ ++ +Y
Sbjct: 159 ELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMY 218
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
C C + A + RN + + M+ GYS G +E+A FD +TEK++V W +
Sbjct: 219 CLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMID 278
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
G ++ + +E + + G+ +++V LL A A G ++H I++ G
Sbjct: 279 GCLRKNQLDEALVYYTEML-RCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFD 337
Query: 425 MDKKLISTLVDMYS-------------------------------KCGNMTYAEIIFQNF 453
L +T++ Y+ K G + A +F
Sbjct: 338 CYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQT 397
Query: 454 IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG-IKPDAVTFVAILSAFRHCGSVEMG 512
++D+ +N MI+ YA + A+ LF EM+ +KPDA+T V++ SA GS+E G
Sbjct: 398 HDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEG 457
Query: 513 EK---YFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM-------KSIPTEEDAV 562
++ Y N T I P + A +ID+Y + +E A+ S + +A+
Sbjct: 458 KRAHDYLNFST----IPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAI 513
Query: 563 ILGS 566
I GS
Sbjct: 514 ICGS 517
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 153/345 (44%), Gaps = 38/345 (11%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
RS+ + L H +K G +IH Y+ N ++ + + F+ + ++ S N
Sbjct: 317 RSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNA 376
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I+ +K+ ++QAR +FD + KD+ ++N+M+ GY + + AL LF EM S+ + +
Sbjct: 377 LIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQL-ALHLFREMISSSQ-V 434
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+ D T+ S + L ++ G++ H ++ ++ + +++IDMY+KC
Sbjct: 435 KPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKC-------- 486
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAV--SWNTLISGYVQNGD 239
G +E AL F + ++ + WN +I G +G
Sbjct: 487 ------------------------GSIETALNIFHQTKNISSSTISPWNAIICGSATHGH 522
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
A+ L L+ + ++ N TF LSACC V+ K + + I G
Sbjct: 523 AKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYG 582
Query: 300 -IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYS-LQGNME 342
+VD+ K + A+ M+ V+ I M++ S GN+E
Sbjct: 583 CMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVE 627
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 201/734 (27%), Positives = 330/734 (44%), Gaps = 142/734 (19%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMP-ERNVFSWNT---------- 61
H A+ GL+ N L+ +Y + E+R++FDE +RN SWN
Sbjct: 123 HAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDR 182
Query: 62 -------------------------IISACIKSHDLKQARSL------------------ 78
+++AC S DL+ R +
Sbjct: 183 CSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANA 242
Query: 79 -----------------FDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
F P D+V++N+ + G + G++ AL+L ++M+S+ +
Sbjct: 243 LVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCV-LHGHDQHALELLLQMKSSG--L 299
Query: 122 RMDEFTVTSTLNLCVKLLNVGFG--RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
+ FT++S L C F RQ+H FM+K D+ + +L+DMY+K ++A
Sbjct: 300 VPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDA 359
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
+VFE + D + WN LISG G
Sbjct: 360 RKVFEWIPRK---------------------------------DLLLWNALISGCSHGGC 386
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
E L LF RM + G N T A+ L + L + ++H+ K G +S+ V +G
Sbjct: 387 HGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNG 446
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
++D Y KC + YA + F+ + N++ +
Sbjct: 447 LIDSYWKCNCLRYANKV-------------------------------FEEHSSDNIIAF 475
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
T++ + + + E L E + K G+ D +L LL ACA +A GK++HA+++
Sbjct: 476 TSMITALSQCDHGEDAIKLFMEMLRK-GLEPDPFVLSSLLNACASLSAYEQGKQVHAHLI 534
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
+ D + LV Y+KCG++ A++ F ++ +V ++ MI A HGH ++A+
Sbjct: 535 KRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALD 594
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
+F M+++ I P+ +T ++L A H G V+ + YF+SM + I +HY+CMIDL
Sbjct: 595 VFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLL 654
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYV 599
GRA +L+ A+E + S+P E +A + G+ L R++R+ EL A EKL LE +V
Sbjct: 655 GRAGKLDDAMELVNSMPFEANAAVWGALLAASRVHRDPELGKLAAEKLFVLEPEKSGTHV 714
Query: 600 QLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYS 659
LAN YA+ G W E+ ++RK M+ K + SWV ++ +H F VGD SHP+ IY+
Sbjct: 715 LLANTYASAGMWDEVAKVRKLMKDSKVKKEPAMSWVELKDRVHTFIVGDKSHPRARDIYA 774
Query: 660 VLAIFTGELYEIAG 673
L G+L AG
Sbjct: 775 KLEEL-GDLMSKAG 787
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 143/622 (22%), Positives = 256/622 (41%), Gaps = 153/622 (24%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K+GL N L+ YSK L +R++FDE P+ SW+++++A
Sbjct: 27 HAHLLKSGLLHAF--RNHLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYSN---- 80
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
++ P + L + +M A G +R +EF + L
Sbjct: 81 -------NALPREALAAFRAM-----RARG------------------VRCNEFALPIVL 110
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C + G G Q+HA V T F ++L+ MY +EA RVF+ + N
Sbjct: 111 K-CAP--DAGLGVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNA 167
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+ SWN ++S +V+N + ++LF M
Sbjct: 168 V--------------------------------SWNGMMSAFVKNDRCSDAVELFGEMVW 195
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+GVR NE F+ ++AC G R+++ +++H+ V++ G + F ++ +VD+Y K +++
Sbjct: 196 SGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHM 255
Query: 313 A--------------------------------ESMLLLKG---VRNSFSISSMI----- 332
A E +L +K V N F++SS++
Sbjct: 256 AALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAG 315
Query: 333 --------------------------VGYSL------QGNMEEARRHFDSLTEKNVVVWT 360
+G +L G +++AR+ F+ + K++++W
Sbjct: 316 AGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWN 375
Query: 361 ALFSGYVKAQNCEALFDLLSEF--VTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
AL SG C + LS F + KEG + L +L + A A+ ++HA
Sbjct: 376 ALISG-CSHGGCHG--ESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALA 432
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
++G D +++ L+D Y KC + YA +F+ +++ + MI + H E AI
Sbjct: 433 EKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAI 492
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA--CMI 536
LF EML KG++PD ++L+A + E G++ + K TD +A ++
Sbjct: 493 KLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLI---KRKFMTDVFAGNALV 549
Query: 537 DLYGRANQLEKAIEFMKSIPTE 558
Y + +E A +P +
Sbjct: 550 YTYAKCGSIEDADLAFSGLPDK 571
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 110/242 (45%), Gaps = 11/242 (4%)
Query: 344 ARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF--VTKEGVVTDALILVILLGA 401
ARR FD + V W++L + Y N + L+ F + GV + L I+L
Sbjct: 56 ARRVFDETPDPCHVSWSSLVTAY---SNNALPREALAAFRAMRARGVRCNEFALPIVL-K 111
Query: 402 CALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFI-ERDLVL 460
CA A L G ++HA + G+ D + + LV MY G + A +F +R+ V
Sbjct: 112 CAPDAGL--GVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVS 169
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
+N M++ + + A+ LF EM+ G++P+ F +++A +E G K ++M
Sbjct: 170 WNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRK-VHAMV 228
Query: 521 ADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELA 580
+ ++D+Y + + A +P + D V +F++ C L+ + + A
Sbjct: 229 VRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVP-KTDVVSWNAFISGCVLHGHDQHA 287
Query: 581 GE 582
E
Sbjct: 288 LE 289
>gi|224124484|ref|XP_002319343.1| predicted protein [Populus trichocarpa]
gi|222857719|gb|EEE95266.1| predicted protein [Populus trichocarpa]
Length = 848
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 197/649 (30%), Positives = 309/649 (47%), Gaps = 99/649 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K G L+ +YSK L+ ++ +FD++ + WN +ISA +
Sbjct: 279 HCDLVKLGFENDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYV----- 333
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
G D LK++ +M+ I D T T+ L
Sbjct: 334 ---------------------------GNGRSYDGLKIYKQMKVL--QIPPDSLTATNVL 364
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C + + FGR +HA +VK ++ S+L+ MYSKC ++A +F N
Sbjct: 365 SSCCLVGSYDFGRLIHAELVKRPIQSNVALQSALLTMYSKCGNSDDANSIF-------NT 417
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
I D V+W ++ISG+ QN E L+ + M
Sbjct: 418 IKG--------------------------RDVVAWGSMISGFCQNRKYMEALEFYNSMTV 451
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G + + AS +SAC GL+NV IH +K+GL + FV+S +VD+Y K N+
Sbjct: 452 YGEKPDSDIMASVVSACTGLKNVNLGCTIHGLAIKSGLEQDVFVASSLVDMYSK---FNF 508
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
+ + GN+ F + KN+V W ++ S Y +
Sbjct: 509 PK----------------------MSGNV------FSDMPLKNLVAWNSIISCYCRNGLP 540
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
+ L S+ +T+ G+ D++ + +L + + A L GK +H Y++R + D +L +
Sbjct: 541 DLSISLFSQ-MTQYGLFPDSVSITSVLVSVSSVAVLRKGKAVHGYLIRQRIPSDLQLENA 599
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
L+DMY KCG + YA+ IFQN ++ +LV +N+MIA HG KA+ LF+EM GI PD
Sbjct: 600 LIDMYIKCGFLKYAQHIFQNMLQTNLVTWNIMIAGCGSHGDWLKAMSLFDEMRSFGIAPD 659
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
+TF+++L++ HCG +E G K F MT ++ I P +HY ++DL GRA +L+ A F+
Sbjct: 660 DITFISLLTSCNHCGFIEEGLKLFQLMTVEHGIEPRMEHYVNIVDLLGRAGRLDDAYAFV 719
Query: 553 KSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWA 612
K++P E D I S L CR++ N EL A KLL +E + + YVQL N+Y
Sbjct: 720 KNLPIEPDRSIWLSLLCSCRVHHNVELGKLAAHKLLDIEPSRGSNYVQLLNLYGENELQD 779
Query: 613 EMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+R M+ + GCSW+ V + I +F GD S P+T IY +L
Sbjct: 780 RAANLRASMKEKGLKKTPGCSWIEVGNSIDVFFSGDSSSPRTIEIYDLL 828
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 107/477 (22%), Positives = 196/477 (41%), Gaps = 71/477 (14%)
Query: 101 EGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMV-KTSNDAS 159
+G DAL+ + + + FT S L C L N+ +G+ +H+ ++ K +
Sbjct: 30 QGQYVDALQFY-----SRNPLNATRFTYPSLLKACGFLSNLQYGKTIHSTIITKGFFYSD 84
Query: 160 GFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQP 219
+ +SLI+ Y KC + A +VF+ E +
Sbjct: 85 PYITTSLINFYFKCGSFGNAVKVFDKLPES----------------------------EV 116
Query: 220 ELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAK 279
D WN++++GY + G +EG+ F RM GVR + ++ L A G ++ AK
Sbjct: 117 SGQDVTFWNSIVNGYFRFGHKKEGIAQFCRMQLFGVRPDAYSLCILLGASDG--HLGYAK 174
Query: 280 EIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQG 339
+IH + ++ +PF+ SG++ +Y C G
Sbjct: 175 QIHGYSVRKVFYGDPFLESGLIYMYFSC-------------------------------G 203
Query: 340 NMEEARRHFDSLTEK-NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVIL 398
+A R F L +K NVV W + G+ + E ++ E V +
Sbjct: 204 RPLDAWRLFKELEDKGNVVAWNVMIGGFGENGLWENSLEVYL-LAKNENVKLVSASFTST 262
Query: 399 LGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDL 458
L AC + G ++H ++++G + D + ++L+ MYSKC + AE +F +
Sbjct: 263 LSACCQGEFVSFGMQVHCDLVKLGFENDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKT 322
Query: 459 VLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNS 518
L+N MI+ Y +G + ++++M I PD++T +LS+ GS + G + ++
Sbjct: 323 ELWNAMISAYVGNGRSYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYDFG-RLIHA 381
Query: 519 MTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNR 575
I + ++ +Y + + A +I D V GS ++ NR
Sbjct: 382 ELVKRPIQSNVALQSALLTMYSKCGNSDDANSIFNTI-KGRDVVAWGSMISGFCQNR 437
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 144/325 (44%), Gaps = 53/325 (16%)
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI-SN 293
VQ G + L+ + R N R+ T+ S L AC L N++ K IHS ++ G S+
Sbjct: 28 VQQGQYVDALQFYSRNPLNATRF---TYPSLLKACGFLSNLQYGKTIHSTIITKGFFYSD 84
Query: 294 PFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
P++++ +++ Y KC G+ A + FD L E
Sbjct: 85 PYITTSLINFYFKC-------------------------------GSFGNAVKVFDKLPE 113
Query: 354 -----KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKE--GVVTDALILVILLGACALQA 406
++V W ++ +GY + + + + +++F + GV DA L ILLGA
Sbjct: 114 SEVSGQDVTFWNSIVNGYFRFGHKK---EGIAQFCRMQLFGVRPDAYSLCILLGAS--DG 168
Query: 407 ALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER-DLVLYNVMI 465
L K+IH Y +R D L S L+ MY CG A +F+ ++ ++V +NVMI
Sbjct: 169 HLGYAKQIHGYSVRKVFYGDPFLESGLIYMYFSCGRPLDAWRLFKELEDKGNVVAWNVMI 228
Query: 466 ACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKI 525
+ +G E ++ ++ + +K + +F + LSA V G + + K+
Sbjct: 229 GGFGENGLWENSLEVYLLAKNENVKLVSASFTSTLSACCQGEFVSFGMQVHCDLV---KL 285
Query: 526 SPETDHYAC--MIDLYGRANQLEKA 548
E D Y C ++ +Y + +E A
Sbjct: 286 GFENDPYVCTSLLTMYSKCKLVEDA 310
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 111/255 (43%), Gaps = 39/255 (15%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
N+ H AIK+GL + L+ +YSK N + S +F +MP +N+ +WN+IIS
Sbjct: 473 NVNLGCTIHGLAIKSGLEQDVFVASSLVDMYSKFNFPKMSGNVFSDMPLKNLVAWNSIIS 532
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
++ G ++ LF +M + D
Sbjct: 533 CYCRN--------------------------------GLPDLSISLFSQMTQYG--LFPD 558
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
++TS L + + G+ +H ++++ + ++LIDMY KC + A +F+
Sbjct: 559 SVSITSVLVSVSSVAVLRKGKAVHGYLIRQRIPSDLQLENALIDMYIKCGFLKYAQHIFQ 618
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN---DAVSWNTLISGYVQNGDAE 241
+ NL++ N M+A C G+ A+ F D +++ +L++ G E
Sbjct: 619 NML-QTNLVTWNIMIAGCGSHGDWLKAMSLFDEMRSFGIAPDDITFISLLTSCNHCGFIE 677
Query: 242 EGLKLFVRMG-ENGV 255
EGLKLF M E+G+
Sbjct: 678 EGLKLFQLMTVEHGI 692
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 211/738 (28%), Positives = 329/738 (44%), Gaps = 147/738 (19%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L++ H I G+++ +L+ +Y L + RK+FD++ VF WN ++S
Sbjct: 384 SLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMS 443
Query: 65 ACIKSHDLKQARSLFDSSPHKDLV------------------------------------ 88
K + +++ SLF +V
Sbjct: 444 EYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGS 503
Query: 89 ---TYNSMLCGYINAEGYEADALKLFIEMQSADE-------------------------- 119
NS++ Y G E+ A LF E+ D
Sbjct: 504 NTAVVNSLIAAYFKFGGVES-AHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQM 562
Query: 120 ---HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCY 176
+ +D T+ S L + N+ GR LH F VK ++L+DMYSKC
Sbjct: 563 LILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNL 622
Query: 177 EEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQ 236
A VF ++M T VSW + I+ YV+
Sbjct: 623 NGATEVF------------------------VKMGDTTI---------VSWTSTIAAYVR 649
Query: 237 NGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFV 296
G + + LF M GVR + +T S + AC ++ +++HS+V+KNG+ SN V
Sbjct: 650 EGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPV 709
Query: 297 SSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNV 356
++ ++++Y KC G++EEAR F + K++
Sbjct: 710 TNALINMYAKC-------------------------------GSVEEARLVFSKIPVKDI 738
Query: 357 VVWTALFSGY----VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
V W + GY + + E D+ +F D + + +L ACA AAL G+
Sbjct: 739 VSWNTMIGGYSQNSLPNEALELFLDMQKQF------KPDDITMACVLPACAGLAALDKGR 792
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
EIH +ILR G D + LVDMY+KCG + A+++F ++DL+ + VMIA Y HG
Sbjct: 793 EIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHG 852
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
+AI F EM GI+PD +F IL+A H G + G K+FNSM + + P+ +HY
Sbjct: 853 FGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHY 912
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
AC++DL R L KA +F++S+P + D I G L+ CR++ + +LA + E + LE
Sbjct: 913 ACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEP 972
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVS 650
+N YV LANVYA W E+ ++RK+M RG K N GCSW+ V + +IF G+
Sbjct: 973 DNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQN--PGCSWIEVGGKFNIFVAGNSK 1030
Query: 651 HPKTNAIYSVLAIFTGEL 668
HP+ I +L T ++
Sbjct: 1031 HPQAKRIDVLLRKLTMQM 1048
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 144/608 (23%), Positives = 239/608 (39%), Gaps = 109/608 (17%)
Query: 25 TITTNQLIHIY---SKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDS 81
TI T+ H + S + +R +F + P R +T+ C+ F +
Sbjct: 282 TIPTSSPYHTHKTTSNYTKKSHNRFIFFKQPRRTCLLHSTV---CVSPS--------FTN 330
Query: 82 SPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNV 141
+ H N+ + + E L+ IE+ + + + + S L LC + ++
Sbjct: 331 TTHSVTQNQNAKINKFC-----EMGDLRNAIELLTKSKSYELGLNSYCSVLQLCAEKKSL 385
Query: 142 GFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAA 201
G+++H+ ++ + L+ MY C
Sbjct: 386 EDGKRVHSVIISNGISIDEALGAKLVFMYVNC---------------------------- 417
Query: 202 CCREGEMEMALKTFWRQPELNDAVS-WNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEH 260
G++ K F + +ND V WN L+S Y + G+ E + LF +M + GV N +
Sbjct: 418 ----GDLVQGRKIFDKI--MNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCY 471
Query: 261 TFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLK 320
TF L L VK K +H +VLK G SN V
Sbjct: 472 TFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAV------------------------ 507
Query: 321 GVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV----KAQNCEALF 376
++S+I Y G +E A FD L+E +VV W ++ +G V E
Sbjct: 508 -------VNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFI 560
Query: 377 DLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDM 436
+L GV D LV +L A A L G+ +H + ++ + +TL+DM
Sbjct: 561 QMLI-----LGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDM 615
Query: 437 YSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTF 496
YSKCGN+ A +F + +V + IA Y G AI LF+EM KG++PD T
Sbjct: 616 YSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTV 675
Query: 497 VAILSAFRHCGSVEMGEKYF-----NSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
+I+ A S++ G N M ++ ++ +I++Y + +E+A
Sbjct: 676 TSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVT------NALINMYAKCGSVEEARLV 729
Query: 552 MKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNW 611
IP +D V + + N L EA E L ++ K + +A V A
Sbjct: 730 FSKIPV-KDIVSWNTMIGGYSQN---SLPNEALELFLDMQKQFKPDDITMACVLPACAGL 785
Query: 612 AEMGRIRK 619
A + + R+
Sbjct: 786 AALDKGRE 793
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 110/267 (41%), Gaps = 68/267 (25%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTI 62
S +L + H IK G+ TN LI++Y+K + E+R +F ++P +++ SWNT+
Sbjct: 685 SSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTM 744
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
I GY + +AL+LF++MQ + +
Sbjct: 745 IG-------------------------------GY-SQNSLPNEALELFLDMQ---KQFK 769
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
D+ T+ L C L + GR++H +++ + +L+DMY+KC
Sbjct: 770 PDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKC--------- 820
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
G + +A F P+ D +SW +I+GY +G E
Sbjct: 821 -----------------------GLLVLAQLLFDMIPK-KDLISWTVMIAGYGMHGFGNE 856
Query: 243 GLKLFVRMGENGVRWNEHTFASALSAC 269
+ F M G+ +E +F+ L+AC
Sbjct: 857 AISTFNEMRIAGIEPDESSFSVILNAC 883
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 195/661 (29%), Positives = 312/661 (47%), Gaps = 80/661 (12%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMP-ERNVFSWNTIISACIKSHD 71
H Q ++ L ++ + ++ IYS NLL +S +F+ +P +W +II C SH
Sbjct: 28 HAQILRTSLPSPSLLST-ILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIR-CYTSH- 84
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
G +L FI+M ++ ++ D S
Sbjct: 85 ------------------------------GLFLHSLSFFIQMLASGKY--PDHNVFPSV 112
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC---RVF-EGCT 187
L C + ++ FG +H +++ + ++L++MYSK EE +VF EG T
Sbjct: 113 LKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKT 172
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
+V SK +E +L+ + D VSWNT+ISG QNG E+ L +
Sbjct: 173 SDV--YSKKE------KESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMV 224
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
MG +R + T +S L N+ KEIH + ++NG ++ F+ S ++D+Y KC
Sbjct: 225 REMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKC 284
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
++ + + + + S +S+I G G +E + F + + FS
Sbjct: 285 TRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSS-- 342
Query: 368 KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDK 427
++ ACA LH GK++H YI+R +
Sbjct: 343 ------------------------------IMPACAHLTTLHLGKQLHGYIIRSRFDGNV 372
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
+ S LVDMY+KCGN+ A IF D+V + MI YA HGH AI LF+ M +
Sbjct: 373 FIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVE 432
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEK 547
G+KP+ V F+A+L+A H G V+ KYFNSMT DY+I P +HYA + DL GR +LE+
Sbjct: 433 GVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEE 492
Query: 548 AIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAA 607
A EF+ + E + + L CR+++N ELA + +KL ++ N YV L+N+Y+A
Sbjct: 493 AYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSA 552
Query: 608 EGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGE 667
G W + ++R MR + CSW+ +++++H F GD SHP + I L + +
Sbjct: 553 AGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQ 612
Query: 668 L 668
+
Sbjct: 613 M 613
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 195/373 (52%), Gaps = 52/373 (13%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRES---RKLFDEMPERNVF 57
M+ L E++ H I+ G+ T N L+++YSK L E +K+FDE +V+
Sbjct: 119 MKDLRFGESV--HGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVY 176
Query: 58 SWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAE-GYEADALKLFIEMQS 116
S +S+ L R +F+ P +D+V++N+++ G NA+ G DAL + EM +
Sbjct: 177 SKKEK-----ESYYLGSLRKVFEMMPKRDIVSWNTVISG--NAQNGMHEDALMMVREMGN 229
Query: 117 ADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCY 176
AD +R D FT++S L + + +N+ G+++H + ++ DA F SSLIDMY+KC
Sbjct: 230 AD--LRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRV 287
Query: 177 EEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQ 236
+++CRVF + P+ +D +SWN++I+G VQ
Sbjct: 288 DDSCRVF--------------------------------YMLPQ-HDGISWNSIIAGCVQ 314
Query: 237 NGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFV 296
NG +EGLK F +M ++ N +F+S + AC L + K++H +++++ N F+
Sbjct: 315 NGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFI 374
Query: 297 SSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL----T 352
+S +VD+Y KC N+ A + + + S ++MI+GY+L G+ +A F +
Sbjct: 375 ASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGV 434
Query: 353 EKNVVVWTALFSG 365
+ N V + A+ +
Sbjct: 435 KPNYVAFMAVLTA 447
>gi|116310835|emb|CAH67622.1| OSIGBa0140J09.3 [Oryza sativa Indica Group]
Length = 1027
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 207/691 (29%), Positives = 331/691 (47%), Gaps = 118/691 (17%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
+ NVF +++I+ K A+++FD S K++V +N+ML G++ E E +A+++F
Sbjct: 357 DANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPE-EAIRMFQ 415
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
M ++ DEFT S L C L + G+Q+H +K D S F ++ +DMYSK
Sbjct: 416 YMMRYT--LQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSK 473
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
+A +F +LI D++SWN L
Sbjct: 474 YGAIGDAKALF-------SLI--------------------------PYKDSISWNALTV 500
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
G QN + EE + + RM +G+ ++ +F++A++AC +R + K+IH +K G+ S
Sbjct: 501 GLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICS 560
Query: 293 NPFVSSGIVDVYCK-----------------------------CENMNYAESMLLLKGV- 322
N V S ++D+Y K +N N E++ L + V
Sbjct: 561 NHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVL 620
Query: 323 -----RNSFSISSMIVG---------------YSLQGN---------------------M 341
+S + SS++ G Y+L+ +
Sbjct: 621 KDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKML 680
Query: 342 EEARRHFDSLTE-KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKE-GVVTDALILVILL 399
E+A + + + KN+ WTA+ SGY AQN L+S + + V +D +L
Sbjct: 681 EDANKLLTEMPDHKNLFEWTAIISGY--AQNGYGDHSLVSFWRMRHCNVRSDEATFASVL 738
Query: 400 GACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIE---- 455
AC+ A GKEIH I + G + S L+DMYSKCG++ + F+ F E
Sbjct: 739 KACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISS---FEAFKELKNK 795
Query: 456 RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKY 515
+D++ +N MI +A +G+ ++A+LLF++M E IKPD VTF+ +L A H G + G +
Sbjct: 796 QDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHF 855
Query: 516 FNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNR 575
F M Y ++P DHYAC IDL GR L++A E + +P D V+ ++L CR+++
Sbjct: 856 FGPMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHK 915
Query: 576 NAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWV 635
+ E A KL+ LE + YV L++++AA GNWAE R+ MR +F GCSW+
Sbjct: 916 DEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWI 975
Query: 636 YVEHEIHIFTVGDVSHPKTNAIYSVLAIFTG 666
V ++ +F V D HP IY +L TG
Sbjct: 976 TVGNKTSLFLVQDKYHPDNLRIYEMLGDLTG 1006
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/468 (25%), Positives = 214/468 (45%), Gaps = 68/468 (14%)
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
R D+F + L+ C ++ + +GRQ+H +VK+ +S F ++L+DMY+KC A R
Sbjct: 155 RPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARR 214
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDA----------------- 224
VF+G + I ++M+A R G + AL F R ++ A
Sbjct: 215 VFDGIACP-DTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSG 273
Query: 225 -----------------VSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALS 267
V+WN +ISG+ Q+G L L+ M G+ TFAS LS
Sbjct: 274 RLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLS 333
Query: 268 ACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFS 327
A ++ +++H+ + +GL +N FV S ++++Y KC
Sbjct: 334 AAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKC-------------------- 373
Query: 328 ISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEG 387
G +A+ FD EKN+V+W A+ +G+V+ + E + +++ +
Sbjct: 374 -----------GCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMF-QYMMRYT 421
Query: 388 VVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAE 447
+ TD V +LGAC ++ + GK++H ++ + + + + +DMYSK G + A+
Sbjct: 422 LQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAK 481
Query: 448 IIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCG 507
+F +D + +N + A + EE+A+ + + M GI PD V+F ++A +
Sbjct: 482 ALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIR 541
Query: 508 SVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSI 555
+ E G K + + Y I + +IDLY + +E + + +
Sbjct: 542 ATETG-KQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQV 588
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 138/594 (23%), Positives = 254/594 (42%), Gaps = 125/594 (21%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN------------ 60
H +K+G + + L+ +Y+K + +R++FD + + W+
Sbjct: 181 HCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCY 240
Query: 61 -----------------------TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGY 97
TIIS S L A +L P V +N+++ G+
Sbjct: 241 QEALALFSRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGH 300
Query: 98 INAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSND 157
+ G E + L L+ +M+S + T S L+ + G+Q+HA V D
Sbjct: 301 AQS-GLEFNVLGLYKDMRSWG--LWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLD 357
Query: 158 ASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWR 217
A+ F SSLI++Y+KC C +A VF+ E+
Sbjct: 358 ANVFVGSSLINLYAKCGCPSDAKNVFDLSCEK---------------------------- 389
Query: 218 QPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKC 277
+ V WN +++G+VQN EE +++F M ++ +E TF S L AC L +
Sbjct: 390 -----NIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYL 444
Query: 278 AKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSL 337
K++H +KN + + FV++ +D+Y K + A+++ L ++S S +++ VG L
Sbjct: 445 GKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVG--L 502
Query: 338 QGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVI 397
N+EE E+ V + + G+ D +
Sbjct: 503 AQNLEE---------EEAVCMLKRM---------------------RLHGITPDDVSFST 532
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD 457
+ AC+ A GK+IH ++ G+ + + S+L+D+YSK G++ + IF
Sbjct: 533 AINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASS 592
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR-----------HC 506
+V N +IA + + +E++AI LF+++L+ G+KP +VTF +ILS HC
Sbjct: 593 IVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHC 652
Query: 507 GSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEED 560
+++ G Y +++ + +Y ++ LE A + + +P ++
Sbjct: 653 YTLKSGVLYDDTLLG-----------VSLAGIYLKSKMLEDANKLLTEMPDHKN 695
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 98/450 (21%), Positives = 192/450 (42%), Gaps = 68/450 (15%)
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
R+ G + + + +++V C+ G + A E + ++L+S + ++G
Sbjct: 81 RILRGGSPLLGRLG-DSLVELYCKSGRVGYAWSALGYAGERASGAA-SSLLSCHARSGSP 138
Query: 241 EEGLKLF--VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
+ L F +R G R ++ A LSAC + + +++H V+K+G S+ F +
Sbjct: 139 GDVLGAFRYIRCTAGG-RPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEA 197
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE----- 353
+VD+Y KC ++ A + ++ SSMI Y G +EA F + +
Sbjct: 198 ALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAP 257
Query: 354 ------------------------------KNVVVWTALFSGYVKAQ---NCEALFDLLS 380
+ V W A+ SG+ ++ N L+ +
Sbjct: 258 DQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMR 317
Query: 381 EFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC 440
+ G+ +L A A A G+++HA + G+ + + S+L+++Y+KC
Sbjct: 318 SW----GLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKC 373
Query: 441 GNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAIL 500
G + A+ +F E+++V++N M+ + + E+AI +F+ M+ ++ D TFV+IL
Sbjct: 374 GCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSIL 433
Query: 501 SAFRHCGSVEMGEKYF-----NSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSI 555
A + S +G++ N M ++ T +D+Y + + A I
Sbjct: 434 GACTYLSSFYLGKQVHCVTIKNCMDISLFVANAT------LDMYSKYGAIGDAKALFSLI 487
Query: 556 PTEE----DAVILGSFLN------VCRLNR 575
P ++ +A+ +G N VC L R
Sbjct: 488 PYKDSISWNALTVGLAQNLEEEEAVCMLKR 517
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 108/268 (40%), Gaps = 66/268 (24%)
Query: 3 SLNLKEALICHVQAIKAG-LTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
SLN H +K+G L T+ L IY K +L ++ KL EMP+
Sbjct: 641 SLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPD-------- 692
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
HK+L + +++ GY GY +L F M+ + +
Sbjct: 693 ----------------------HKNLFEWTAIISGYAQ-NGYGDHSLVSFWRMRHCN--V 727
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
R DE T S L C + G+++H + K+ + A S+LIDMYSKC
Sbjct: 728 RSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKC-------- 779
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
G++ + + F D + WN++I G+ +NG A+
Sbjct: 780 ------------------------GDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYAD 815
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSAC 269
E L LF +M E ++ +E TF L AC
Sbjct: 816 EALLLFQKMEELQIKPDEVTFLGVLIAC 843
Score = 42.7 bits (99), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 58/145 (40%), Gaps = 2/145 (1%)
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
+ +H ILR G + +L +LV++Y K G + YA ER + +++C+A
Sbjct: 76 RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 135
Query: 472 GHEEKAILLFEEM-LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD 530
G + F + G +PD +LSA G + G + + S
Sbjct: 136 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKS-GFSSSVF 194
Query: 531 HYACMIDLYGRANQLEKAIEFMKSI 555
A ++D+Y + + A I
Sbjct: 195 CEAALVDMYAKCGDVPNARRVFDGI 219
>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 298 bits (762), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 190/613 (30%), Positives = 314/613 (51%), Gaps = 74/613 (12%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
E++ N +I + +K ++ A LFD P+K+++++ ++L GY +A++LF
Sbjct: 281 EKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGY-KQNSLHKEAMELFT 339
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
M ++ D F +S L C L + FG Q+HA+ +K + + +SLIDMY+K
Sbjct: 340 SMPKFG--LKPDMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAK 397
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C C EA +VF+ + AA +D V +N +I
Sbjct: 398 CDCLTEARKVFD-------------IFAA--------------------DDVVLFNAMIE 424
Query: 233 GYVQNG---DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG 289
GY + G + + L +F M +R + TF S L A L ++ +K+IH + K G
Sbjct: 425 GYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKFG 484
Query: 290 LISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFD 349
L + F S ++ VY C Y L+ ++R FD
Sbjct: 485 LNLDIFAGSALIAVYSNC---------------------------YCLK----DSRLVFD 513
Query: 350 SLTEKNVVVWTALFSGYVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAAL 408
+ K++V+W ++FSGYV+ ++N EAL L ++++ D V ++ A A+L
Sbjct: 514 EMKVKDLVIWNSMFSGYVQQSENEEALNLFLELQLSRDR--PDEFTFVDMVTAAGNLASL 571
Query: 409 HPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACY 468
G+E H +L+ G++ + + + L+DMY+KCG+ A F + RD+V +N +I+ Y
Sbjct: 572 QLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSY 631
Query: 469 AHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE 528
A+HG KA+ + E+M+ +GI+P+ +TFV +LSA H G VE G K F M + I PE
Sbjct: 632 ANHGEGRKALQMLEKMMCEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPE 690
Query: 529 TDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLL 588
T+HY CM+ L GRA +L +A E ++ +PT+ A++ S L+ C N ELA A E +
Sbjct: 691 TEHYVCMVSLLGRAGRLNEARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEYAAEMAI 750
Query: 589 RLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGD 648
+ + + L+N+YA++G W + ++R++M+ + G SW+ + E+HIF D
Sbjct: 751 LSDPKDSGSFTLLSNIYASKGMWTDAKKVRERMKFEGVVKEPGRSWIEINKEVHIFLSKD 810
Query: 649 VSHPKTNAIYSVL 661
SH K N IY VL
Sbjct: 811 KSHCKANQIYEVL 823
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 121/500 (24%), Positives = 232/500 (46%), Gaps = 74/500 (14%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
+R+V+ +I +K ++ AR +FD+ P K VT+ +M+ G + G +L+LF
Sbjct: 180 DRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKM-GRSYVSLQLFY 238
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
++ + + D + +++ L+ C L + G+Q+HA +++ ++ ++ LID Y K
Sbjct: 239 QLMEGN--VVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVK 296
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C A ++F+G P N +SW TL+S
Sbjct: 297 CGRVRAAHKLFDG--------------------------------MPNKN-IISWTTLLS 323
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
GY QN +E ++LF M + G++ + +S L++C L ++ ++H++ +K L +
Sbjct: 324 GYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANLGN 383
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
+ +V++ ++D+Y KC+ + EAR+ FD
Sbjct: 384 DSYVTNSLIDMYAKCDCLT-------------------------------EARKVFDIFA 412
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEF--VTKEGVVTDALILVILLGACALQAALHP 410
+VV++ A+ GY + L D L+ F + + L V LL A A +L
Sbjct: 413 ADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGL 472
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
K+IH + + G+ +D S L+ +YS C + + ++F +DLV++N M + Y
Sbjct: 473 SKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQ 532
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD 530
E+A+ LF E+ +PD TFV +++A + S+++G+++ + K E +
Sbjct: 533 QSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLL---KRGLECN 589
Query: 531 HYA--CMIDLYGRANQLEKA 548
Y ++D+Y + E A
Sbjct: 590 PYITNALLDMYAKCGSPEDA 609
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/402 (28%), Positives = 188/402 (46%), Gaps = 53/402 (13%)
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
E++ N ++ R G M A K F + PE N V+W+T++S +G EE L +F+
Sbjct: 76 ELDTYLSNILMNLYSRAGGMVYARKVFEKMPERN-LVTWSTMVSACNHHGFYEESLVVFL 134
Query: 249 ---RMGENGVRWNEHTFASALSACCGLRNVK--CAKEIHSWVLKNGLISNPFVSSGIVDV 303
R +N NE+ +S + AC GL ++ S+++K+ + +V + ++D
Sbjct: 135 DFWRTRKNSP--NEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSRFDRDVYVGTLLIDF 192
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y K +GN++ AR FD+L EK+ V WT +
Sbjct: 193 YLK-------------------------------EGNIDYARLVFDALPEKSTVTWTTMI 221
Query: 364 SGYVKAQNCEALFDLLSEFVTKEG-VVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
SG VK L + + EG VV D IL +L AC++ L GK+IHA+ILR G
Sbjct: 222 SGCVKMGRSYVSLQLFYQLM--EGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYG 279
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
+ D L++ L+D Y KCG + A +F ++++ + +++ Y + ++A+ LF
Sbjct: 280 HEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFT 339
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE--TDHYAC--MIDL 538
M + G+KPD +IL++ C S+ E F + Y I D Y +ID+
Sbjct: 340 SMPKFGLKPDMFACSSILTS---CASLHALE--FGTQVHAYTIKANLGNDSYVTNSLIDM 394
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFL-NVCRLNRNAEL 579
Y + + L +A + I +D V+ + + RL EL
Sbjct: 395 YAKCDCLTEARKVF-DIFAADDVVLFNAMIEGYSRLGTQWEL 435
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 89/180 (49%), Gaps = 11/180 (6%)
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD 457
LL AL L +H I+ G+++D L + L+++YS+ G M YA +F+ ER+
Sbjct: 50 LLQLRALDDPLLYHNVVHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERN 109
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLE-KGIKPDAVTFVAILSAF-RHCGSVEMGEKY 515
LV ++ M++ HHG E+++++F + + P+ ILS+F + C ++ ++
Sbjct: 110 LVTWSTMVSACNHHGFYEESLVVFLDFWRTRKNSPNEY----ILSSFIQACSGLDGSGRW 165
Query: 516 --FNSMTADYKISPETDHY--ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVC 571
F + K + D Y +ID Y + ++ A ++P E+ V + ++ C
Sbjct: 166 MVFQLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALP-EKSTVTWTTMISGC 224
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H Q +K GL TN L+ +Y+K ++ K FD R+V WN++IS+ +
Sbjct: 578 HCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEG 637
Query: 73 KQARSLFDS----SPHKDLVTYNSMLCGYINAEGYEADALKLF 111
++A + + + +T+ +L +A G D LK F
Sbjct: 638 RKALQMLEKMMCEGIEPNYITFVGVLSACSHA-GLVEDGLKQF 679
>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 878
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 199/629 (31%), Positives = 314/629 (49%), Gaps = 70/629 (11%)
Query: 45 RKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDS-----SPHK-DLVTYNSMLCGYI 98
R DE ER F +N ++S + + A+SLF + SP D+VT+N+M+ +
Sbjct: 201 RGFLDEGRER--FPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLV 258
Query: 99 NAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSN-D 157
G A+A+++ +M S +R D T S L C +L + GR++HA ++K ++
Sbjct: 259 QG-GRCAEAVEVLYDMVSLG--VRPDGVTFASALPACSRLEMLALGREMHAVVLKDADLA 315
Query: 158 ASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWR 217
A+ F S+L+DMY+ A RVF+ MV R+ M
Sbjct: 316 ANSFVASALVDMYAGNEKVASARRVFD-------------MVPEPSRQLGM--------- 353
Query: 218 QPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM-GENGVRWNEHTFASALSACCGLRNVK 276
WN +I GY Q G EE L+LF RM E G +E T + L AC
Sbjct: 354 ---------WNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGFA 404
Query: 277 CAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYS 336
+ +H +V+K G+ N FV + ++D+Y + M+ A + + R+ S +++I G
Sbjct: 405 GKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCV 464
Query: 337 LQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEG----VVTDA 392
+QG+ EA F +TE + + S T+EG + +
Sbjct: 465 VQGHAAEA---FQLVTEMQLPSPSP-----------------SSSSTTEEGEAHRCMPNN 504
Query: 393 LILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQN 452
+ L+ LL CA AA GKEIH Y +R ++ D + S LVDMY+KCG + + +F
Sbjct: 505 ITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDR 564
Query: 453 FIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG-IKPDAVTFVAILSAFRHCGSVEM 511
R+++ +NV+I Y HG ++A+ LF+EM G P+ VTF+A L+A H G V+
Sbjct: 565 LPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDR 624
Query: 512 GEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSI-PTEEDAVILGSFLNV 570
G + F+ M D+ + P D +AC++D+ GRA +L++A + S+ P E+ S L
Sbjct: 625 GLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGA 684
Query: 571 CRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFA 630
CRL+RN EL A E+L LE + YV L N+Y+A G W + +R +MR +
Sbjct: 685 CRLHRNVELGEVAAERLFELEPGEASHYVLLCNIYSAAGMWDKSVAVRVRMRRQGVAKEP 744
Query: 631 GCSWVYVEHEIHIFTVGDVSHPKTNAIYS 659
GCSW+ ++ IH F G+ SHP + +++
Sbjct: 745 GCSWIELDGAIHRFMAGESSHPASAEVHA 773
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 144/354 (40%), Gaps = 85/354 (24%)
Query: 7 KEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISAC 66
KEA+ H +K G+ N L+ +Y++ + +R++F + R+V SWNT+I+ C
Sbjct: 406 KEAM--HGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGC 463
Query: 67 IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQ----------- 115
+ +G+ A+A +L EMQ
Sbjct: 464 V--------------------------------VQGHAAEAFQLVTEMQLPSPSPSSSST 491
Query: 116 --SADEHIRM-DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
+ H M + T+ + L C L G+++H + V+ + ++ S+L+DMY+K
Sbjct: 492 TEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAK 551
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C C + VF+ R P N ++WN LI
Sbjct: 552 CGCLAASRAVFD--------------------------------RLPRRN-VITWNVLIM 578
Query: 233 GYVQNGDAEEGLKLFVRMGENG-VRWNEHTFASALSACCGLRNVKCAKEI-HSWVLKNGL 290
Y +G +E + LF M G NE TF +AL+AC V E+ H +G+
Sbjct: 579 AYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGV 638
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESML--LLKGVRNSFSISSMIVGYSLQGNME 342
P + + +VDV + ++ A S++ + G + + SS++ L N+E
Sbjct: 639 KPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGACRLHRNVE 692
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 157/376 (41%), Gaps = 53/376 (14%)
Query: 220 ELNDAVSWNTLISG---YVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACC---GLR 273
EL DAVS+N+LIS + Q A + L+ + G + V + T S L AC G
Sbjct: 129 ELRDAVSYNSLISALCLFRQWERALDALRDMLAEGRHDV--SSFTLVSVLLACSHLPGDD 186
Query: 274 NVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIV 333
+ +E H++ LK G F+ G R F ++++
Sbjct: 187 GRRLGREAHAFALKRG-----FLDEG-----------------------RERFPFNALLS 218
Query: 334 GYSLQGNMEEARRHFDSLTEK------NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEG 387
Y+ G +++A+ F + +VV W + S V+ C ++L + V+ G
Sbjct: 219 MYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSL-G 277
Query: 388 VVTDALILVILLGACALQAALHPGKEIHAYILR-MGVQMDKKLISTLVDMYSKCGNMTYA 446
V D + L AC+ L G+E+HA +L+ + + + S LVDMY+ + A
Sbjct: 278 VRPDGVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASA 337
Query: 447 EIIFQNFIE--RDLVLYNVMIACYAHHGHEEKAILLFEEM-LEKGIKPDAVTFVAILSAF 503
+F E R L ++N MI YA G +E+A+ LF M E G P T +L A
Sbjct: 338 RRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPA- 396
Query: 504 RHCGSVE--MGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDA 561
C E G++ + ++ ++D+Y R +++ A I D
Sbjct: 397 --CARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMI-DPRDV 453
Query: 562 VILGSFLNVCRLNRNA 577
V + + C + +A
Sbjct: 454 VSWNTLITGCVVQGHA 469
>gi|224122888|ref|XP_002318941.1| predicted protein [Populus trichocarpa]
gi|222857317|gb|EEE94864.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 183/599 (30%), Positives = 303/599 (50%), Gaps = 70/599 (11%)
Query: 74 QARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLN 133
QAR+LFD P +D+V + +M+ GY + Y A +F++M + + + FT++S L
Sbjct: 62 QARNLFDEMPERDVVAWTTMISGYTHCNEY-TQAWSVFVDM-VKNGNDPPNAFTISSVLK 119
Query: 134 LCVKLLNVGFGRQLHAFMVKTS-NDASGFAVSSLIDMYSKCRC-YEEACRVFEGCTEEVN 191
C + V GR +H +K + + ++L+DMY+ C +AC VF E+
Sbjct: 120 ACKGMKRVFCGRLVHGLAIKRRFMEGFIYVDNALMDMYASCGVGMRDACVVFHDIKEK-- 177
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
+ VSW TLI+GY G+ L++F M
Sbjct: 178 -------------------------------NVVSWTTLIAGYTHRGNGNRALQIFREML 206
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
+GV N H+ + A+ AC + + ++IH+ V+K+G S+ V++ I+D+YC+C
Sbjct: 207 LDGVALNPHSISIAVRACASIGSQNFGRQIHTAVIKHGFESDLPVTNSILDMYCRC---- 262
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
G + EA ++F+ +TEK+++ W L +GY ++ +
Sbjct: 263 ---------------------------GCLSEANKYFNDMTEKDLITWNTLIAGYERSDS 295
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
E F + S+ + EG + L+ ACA AAL G+++H I R G+ + +L +
Sbjct: 296 IEPFF-IFSQ-MESEGFSPNCFTFTSLVAACANAAALQCGQQVHGGIFRRGLDGNLELAN 353
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
L+DMY+KCGN+ ++ F +LV + M+ Y HG+ ++A+ LF+EM+ GI+P
Sbjct: 354 ALIDMYAKCGNIIDSQKNFSEMSCTNLVSWTSMMIGYGTHGYGKEAVELFDEMVRSGIRP 413
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
D V F+A+L A H G V+ G +Y N M DY I P + Y C++DL GR ++E A +
Sbjct: 414 DQVVFMAVLHACSHAGLVDQGLRYINCMINDYHIKPNQEIYGCVVDLLGRPGRVEDAYQL 473
Query: 552 MKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNW 611
++S+P D + G+ L C+ + + L A +K L L N YV L+N+YAAEG W
Sbjct: 474 IRSMPFMADESVWGALLGACKAHNFSRLGKLAAKKALALRPNMVETYVMLSNIYAAEGKW 533
Query: 612 AEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYE 670
E R+RK M+ + AG SW+ V ++++ F VG+ +Y VL + + E
Sbjct: 534 GEAARMRKLMKRAGCRKVAGRSWIEVRNQVYSFVVGNKMGSHKEWVYEVLELPVQHMKE 592
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/410 (22%), Positives = 186/410 (45%), Gaps = 82/410 (20%)
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
AC+ HD+K+ K++V++ +++ GY + G AL++F EM + + ++
Sbjct: 167 ACVVFHDIKE----------KNVVSWTTLIAGYTH-RGNGNRALQIFREMLL--DGVALN 213
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
+++ + C + + FGRQ+H ++K ++ +S++DMY +C C EA + F
Sbjct: 214 PHSISIAVRACASIGSQNFGRQIHTAVIKHGFESDLPVTNSILDMYCRCGCLSEANKYFN 273
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
TE+ D ++WNTLI+GY + D+ E
Sbjct: 274 DMTEK---------------------------------DLITWNTLIAGY-ERSDSIEPF 299
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
+F +M G N TF S ++AC ++C +++H + + GL N +++ ++D+Y
Sbjct: 300 FIFSQMESEGFSPNCFTFTSLVAACANAAALQCGQQVHGGIFRRGLDGNLELANALIDMY 359
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
KC GN+ +++++F ++ N+V WT++
Sbjct: 360 AKC-------------------------------GNIIDSQKNFSEMSCTNLVSWTSMMI 388
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG-KEIHAYILRMGV 423
GY + +L E V + G+ D ++ + +L AC+ + G + I+ I +
Sbjct: 389 GYGTHGYGKEAVELFDEMV-RSGIRPDQVVFMAVLHACSHAGLVDQGLRYINCMINDYHI 447
Query: 424 QMDKKLISTLVDMYSKCGNM--TYAEIIFQNFIERDLVLYNVMIACYAHH 471
+ ++++ +VD+ + G + Y I F+ + V ++ AC AH+
Sbjct: 448 KPNQEIYGCVVDLLGRPGRVEDAYQLIRSMPFMADESVWGALLGACKAHN 497
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 148/314 (47%), Gaps = 39/314 (12%)
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG-VRWNEHTFA 263
G A F PE D V+W T+ISGY + + +FV M +NG N T +
Sbjct: 57 RGLTSQARNLFDEMPE-RDVVAWTTMISGYTHCNEYTQAWSVFVDMVKNGNDPPNAFTIS 115
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISN-PFVSSGIVDVYCKCENMNYAESMLLLKGV 322
S L AC G++ V C + +H +K + +V + ++D+Y C + ++ ++ +
Sbjct: 116 SVLKACKGMKRVFCGRLVHGLAIKRRFMEGFIYVDNALMDMYASC-GVGMRDACVVFHDI 174
Query: 323 R--NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLS 380
+ N S +++I GY+ +GN A + F E L D
Sbjct: 175 KEKNVVSWTTLIAGYTHRGNGNRALQIFR-----------------------EMLLD--- 208
Query: 381 EFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC 440
GV + + I + ACA + + G++IH +++ G + D + ++++DMY +C
Sbjct: 209 ------GVALNPHSISIAVRACASIGSQNFGRQIHTAVIKHGFESDLPVTNSILDMYCRC 262
Query: 441 GNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAIL 500
G ++ A F + E+DL+ +N +IA Y E +F +M +G P+ TF +++
Sbjct: 263 GCLSEANKYFNDMTEKDLITWNTLIAGYERSDSIE-PFFIFSQMESEGFSPNCFTFTSLV 321
Query: 501 SAFRHCGSVEMGEK 514
+A + +++ G++
Sbjct: 322 AACANAAALQCGQQ 335
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 119/246 (48%), Gaps = 12/246 (4%)
Query: 329 SSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGV 388
+ ++ Y +G +AR FD + E++VV WT + SGY + + + V
Sbjct: 48 TDLLKSYFERGLTSQARNLFDEMPERDVVAWTTMISGYTHCNEYTQAWSVFVDMVKNGND 107
Query: 389 VTDALILVILLGACALQAALHPGKEIHAY-ILRMGVQMDKKLISTLVDMYSKCG-NMTYA 446
+A + +L AC + G+ +H I R ++ + + L+DMY+ CG M A
Sbjct: 108 PPNAFTISSVLKACKGMKRVFCGRLVHGLAIKRRFMEGFIYVDNALMDMYASCGVGMRDA 167
Query: 447 EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHC 506
++F + E+++V + +IA Y H G+ +A+ +F EML G+ A+ +I A R C
Sbjct: 168 CVVFHDIKEKNVVSWTTLIAGYTHRGNGNRALQIFREMLLDGV---ALNPHSISIAVRAC 224
Query: 507 GSVEMGEKYFNSM--TADYKISPETDHYAC--MIDLYGRANQLEKAIEFMKSIPTEEDAV 562
S+ G + F TA K E+D ++D+Y R L +A ++ + TE+D +
Sbjct: 225 ASI--GSQNFGRQIHTAVIKHGFESDLPVTNSILDMYCRCGCLSEANKYFNDM-TEKDLI 281
Query: 563 ILGSFL 568
+ +
Sbjct: 282 TWNTLI 287
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 107/274 (39%), Gaps = 79/274 (28%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H IK G TN ++ +Y + L E+ K F++M E
Sbjct: 237 HTAVIKHGFESDLPVTNSILDMYCRCGCLSEANKYFNDMTE------------------- 277
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
KDL+T+N+++ GY ++ E FI Q E + FT TS +
Sbjct: 278 ------------KDLITWNTLIAGYERSDSIEP----FFIFSQMESEGFSPNCFTFTSLV 321
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C + G+Q+H + + D + ++LIDMY+KC N+
Sbjct: 322 AACANAAALQCGQQVHGGIFRRGLDGNLELANALIDMYAKCG----------------NI 365
Query: 193 IS--KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
I KN +C + VSW +++ GY +G +E ++LF M
Sbjct: 366 IDSQKNFSEMSC-------------------TNLVSWTSMMIGYGTHGYGKEAVELFDEM 406
Query: 251 GENGVRWNEHTFASALSACC-------GLRNVKC 277
+G+R ++ F + L AC GLR + C
Sbjct: 407 VRSGIRPDQVVFMAVLHACSHAGLVDQGLRYINC 440
>gi|449465220|ref|XP_004150326.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Cucumis sativus]
Length = 874
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 180/625 (28%), Positives = 319/625 (51%), Gaps = 8/625 (1%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K G T N LI++Y K LL +R LFD + S N ++S +K L
Sbjct: 255 HAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFDSCSVLDSVSCNIMMSGYVKLRQL 314
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+ AR LF P + V+Y +M+ G + + +A+++F +M+SA + +E T+ S +
Sbjct: 315 ENARQLFAKMPERGCVSYTTMILGLAQNDCW-GEAIEVFKDMRSAG--VAPNEVTMASVM 371
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C + + R LHA ++K ++L+ MY ++ R+F N
Sbjct: 372 SACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCVFSSLKDTKRLFNEMPVR-NT 430
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+S N M+ + G ++ A + F R PE D SW +I G+VQ + L L+ M +
Sbjct: 431 VSWNVMLKGYVKSGLVDQARELFERIPE-RDVFSWAIMIDGFVQMKRLRKALLLYSAMRK 489
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+ + NE LSAC +++ ++ HS ++KNG + F+ + I+ Y C ++
Sbjct: 490 SDLHPNEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQATIISFYAACRRIDL 549
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
A + + S + MIVG++ G +++AR+ FD + EK+V W+ + SGY + +
Sbjct: 550 AYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELP 609
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
+ DL + + V + + +V + A A L G+ H Y+ + ++ L +
Sbjct: 610 DVALDLFHGMIDSK-VEPNEITMVSVFSAIAALGKLPEGRWAHEYVCNKVIPLNDNLSAA 668
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVL--YNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
++DMY+KCG++ A +F+ ++ + +N +I A HGH ++ +F + + IK
Sbjct: 669 IIDMYAKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGHANLSLEIFSNLQRRSIK 728
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
+++TF+ +LSA H G VE+GE+YF SM + + P HY C++DL GR +L +A E
Sbjct: 729 LNSITFLGVLSACCHAGLVEVGERYFWSMKTQHGVEPNIKHYGCLVDLLGRVGRLREAEE 788
Query: 551 FMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGN 610
++++P + D VI G+ L R + E+ A E L RL+ ++ V L+N+YA G
Sbjct: 789 IVRTMPMKADVVIWGTLLASSRTHGEVEIGERAAENLARLQPSHGPGRVLLSNLYADAGL 848
Query: 611 WAEMGRIRKQMRGMKGNRFAGCSWV 635
W + +R+ ++ + R G S V
Sbjct: 849 WEDAALVRRAIQSQRMIRSPGYSGV 873
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/470 (24%), Positives = 228/470 (48%), Gaps = 37/470 (7%)
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
E +V S L C + G+Q+HA ++K +++ F ++SLI+MY KC A +F+
Sbjct: 232 ELSVVSALKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFD 291
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
C+ ++ +S N M++ + ++E A + F + PE VS+ T+I G QN E +
Sbjct: 292 SCS-VLDSVSCNIMMSGYVKLRQLENARQLFAKMPE-RGCVSYTTMILGLAQNDCWGEAI 349
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
++F M GV NE T AS +SAC + + + +H+ V+K +S+ ++ +Y
Sbjct: 350 EVFKDMRSAGVAPNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMY 409
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
C ++ + + VRN+ S + M+ GY G +++AR F+ + E++V W +
Sbjct: 410 CVFSSLKDTKRLFNEMPVRNTVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWAIMID 469
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
G+V+ + LL + K + + +++V LL AC ++ G++ H+ I++ G
Sbjct: 470 GFVQMKRLRKAL-LLYSAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFV 528
Query: 425 MDKKLISTLVDMYSKC-------------------------------GNMTYAEIIFQNF 453
+ +T++ Y+ C G + A IF
Sbjct: 529 CFDFIQATIISFYAACRRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMM 588
Query: 454 IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
E+D+ ++ MI+ YA + + A+ LF M++ ++P+ +T V++ SA G + G
Sbjct: 589 PEKDVFSWSTMISGYAQNELPDVALDLFHGMIDSKVEPNEITMVSVFSAIAALGKLPEG- 647
Query: 514 KYFNSMTADYKISPETDHY-ACMIDLYGRANQLEKAIEFMKSIPTEEDAV 562
++ + + K+ P D+ A +ID+Y + ++ A++ + I + V
Sbjct: 648 RWAHEYVCN-KVIPLNDNLSAAIIDMYAKCGSIDTALDVFRQIKDKTSTV 696
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 119/289 (41%), Gaps = 39/289 (13%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
+S++++E H +K G +I Y+ + + + + ++ S N
Sbjct: 508 QSVSIEEGRQFHSLIVKNGFVCFDFIQATIISFYAACRRIDLAYLQYQMSDKSHLTSSNV 567
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I K+ + QAR +FD P KD+ ++++M+ GY E + AL LF M D +
Sbjct: 568 MIVGFTKNGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELPDV-ALDLFHGM--IDSKV 624
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+E T+ S + L + GR H ++ + +++IDMY+KC + A
Sbjct: 625 EPNEITMVSVFSAIAALGKLPEGRWAHEYVCNKVIPLNDNLSAAIIDMYAKCGSIDTALD 684
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
VF ++ + +S WN +I G +G A
Sbjct: 685 VFRQIKDKTSTVSP-------------------------------WNAIICGLAMHGHAN 713
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACC--GLRNVKCAKEIHSWVLKN 288
L++F + ++ N TF LSACC GL V E + W +K
Sbjct: 714 LSLEIFSNLQRRSIKLNSITFLGVLSACCHAGLVEV---GERYFWSMKT 759
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 189/621 (30%), Positives = 307/621 (49%), Gaps = 80/621 (12%)
Query: 57 FSWNTIISACI-----KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLF 111
F WN ++A + + ARSLFD P +D+ ++N+M+ G I G A AL +
Sbjct: 246 FQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQ-NGNAAQALDVL 304
Query: 112 IEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYS 171
EM+ E I+M+ TV S L +C +L ++ +H +++K + F ++LI+MY+
Sbjct: 305 DEMRL--EGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYA 362
Query: 172 KCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLI 231
K G +E A K F +Q + D VSWN++I
Sbjct: 363 KF--------------------------------GNLEDARKAF-QQMFITDVVSWNSII 389
Query: 232 SGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG-L 290
+ Y QN D FV+M NG + + T S S R+ K ++ +H ++++ G L
Sbjct: 390 AAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWL 449
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
+ + + + +VD+Y K G ++ A + F+
Sbjct: 450 MEDVVIGNAVVDMYAKL-------------------------------GLLDSAHKVFEI 478
Query: 351 LTEKNVVVWTALFSGYVK---AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAA 407
+ K+V+ W L +GY + A ++ ++ E KE ++ + V +L A A A
Sbjct: 479 IPVKDVISWNTLITGYAQNGLASEAIEVYKMMEE--CKE-IIPNQGTWVSILPAYAHVGA 535
Query: 408 LHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIAC 467
L G +IH +++ + +D + + L+D+Y KCG + A +F + V +N +I+C
Sbjct: 536 LQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISC 595
Query: 468 YAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISP 527
+ HGH EK + LF EML++G+KPD VTFV++LSA H G VE G+ F M +Y I P
Sbjct: 596 HGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQ-EYGIKP 654
Query: 528 ETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKL 587
HY CM+DL GRA LE A +F+K +P + DA I G+ L CR++ N EL A ++L
Sbjct: 655 SLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRL 714
Query: 588 LRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVG 647
++ N YV L+N+YA G W + ++R R + G S + V ++ +F G
Sbjct: 715 FEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTG 774
Query: 648 DVSHPKTNAIYSVLAIFTGEL 668
+ SHPK IY L + T ++
Sbjct: 775 NQSHPKCKEIYEELRVLTAKM 795
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 127/557 (22%), Positives = 228/557 (40%), Gaps = 138/557 (24%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
++ A++ H+ IK GL +N LI++Y+K L ++RK F +M +V SWN+II+
Sbjct: 331 DISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIA 390
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
A ++ D + A G+ F++MQ + D
Sbjct: 391 AYEQNDDP-------------------------VTAHGF-------FVKMQL--NGFQPD 416
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV-SSLIDMYSKCRCYEEACRVF 183
T+ S ++ + + R +H F+++ + ++++DMY+K + A +VF
Sbjct: 417 LLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVF 476
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
E +I + D +SWNTLI+GY QNG A E
Sbjct: 477 E-------IIP--------------------------VKDVISWNTLITGYAQNGLASEA 503
Query: 244 LKLFVRMGE-NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
++++ M E + N+ T+ S L A + ++ +IH V+K L + FV++ ++D
Sbjct: 504 IEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLID 563
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
VY KC G + +A F + +++ V W A+
Sbjct: 564 VYGKC-------------------------------GRLVDAMSLFYQVPQESSVTWNAI 592
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
S + + E L E + EGV D + V LL AC+ + GK + G
Sbjct: 593 ISCHGIHGHAEKTLKLFGEML-DEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYG 651
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
++ K +VD+ + G Y E+ + +FI +D+ L
Sbjct: 652 IKPSLKHYGCMVDLLGRAG---YLEMAY-DFI-KDMPL---------------------- 684
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRA 542
+PDA + A+L A R G++E+G+ F S S +Y + ++Y
Sbjct: 685 -------QPDASIWGALLGACRIHGNIELGK--FASDRLFEVDSKNVGYYVLLSNIYANV 735
Query: 543 NQLEKAIEFMKSIPTEE 559
+ E ++ ++S+ E
Sbjct: 736 GKWE-GVDKVRSLARER 751
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 60/105 (57%), Gaps = 6/105 (5%)
Query: 412 KEIHAYILRMGVQMDKKLIST-LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
K +HA ++ G ++ IST LV++Y+ G+++ + F ++D+ +N MI+ Y H
Sbjct: 136 KCLHALLVVAG-KVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 194
Query: 471 HGHEEKAILLFEE-MLEKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
+GH +AI F + +L I+PD TF +L A CG++ G K
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKA---CGTLVDGRK 236
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 194/653 (29%), Positives = 311/653 (47%), Gaps = 98/653 (15%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R ++++ + H A+K GL+ N L+ +YSK L E
Sbjct: 146 REVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTE------------------ 187
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
A+ LFD + K+ V++N+M+ G + +GY +A LF EMQ E I
Sbjct: 188 -------------AQMLFDKNNRKNAVSWNTMIGG-LCTKGYIFEAFNLFREMQ-MQEDI 232
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
++E TV + L C+++ + ++LH + ++ GF L+
Sbjct: 233 EVNEVTVLNILPACLEISQLRSLKELHGYSIR-----HGFQYDELV-------------- 273
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
N VAA + G + A + F+ E SWN LI G QNGD
Sbjct: 274 -------------ANGFVAAYAKCGMLICAERVFYSM-ETKTVNSWNALIGGCAQNGDPR 319
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
+ L L+++M +G+ + T S L A L++++ KE+H +VL++GL + F+ ++
Sbjct: 320 KALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLL 379
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
+Y C G AR FD + EK+ V W A
Sbjct: 380 SLYIHC-------------------------------GESSSARLLFDGMEEKSSVSWNA 408
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+ SGY + E L + V+ +G + +V +LGAC+ Q+AL GKE H Y L+
Sbjct: 409 MISGYSQNGLPEDALILFRKLVS-DGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKA 467
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
+ D + + +DMY+K G + + +F +DL +N +IA Y HG E++I LF
Sbjct: 468 LLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELF 527
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGR 541
E M + G PD TF+ IL+ H G VE G KYFN M + I P+ +HYAC++D+ GR
Sbjct: 528 ERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGR 587
Query: 542 ANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQL 601
A +L+ A+ + +P + D+ + S L+ CR E+ EKLL LE N YV L
Sbjct: 588 AGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSL 647
Query: 602 ANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKT 654
+N+YA G W ++ R+R+ ++ + + AGCSW+ + ++H F GD P++
Sbjct: 648 SNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIELGGKVHSFVAGDNLLPQS 700
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 182/412 (44%), Gaps = 67/412 (16%)
Query: 105 ADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVS 164
+DA+ +F+++ + D D FT + C L+ G G +H ++K +
Sbjct: 12 SDAIDMFVKLIT-DTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIK---------MG 61
Query: 165 SLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDA 224
L+D VF G NA++A + G ++ A+K F P + +
Sbjct: 62 LLLD-------------VFVG----------NALIAMYGKFGFVDAAVKVFHYMP-VRNL 97
Query: 225 VSWNTLISGYVQNGDAEEGLKLFVRM--GENGVRWNEHTFASALSACCGLRNVKCAKEIH 282
VSWN++ISG+ +NG +++ + V M GE G+ + T + L C +V+ IH
Sbjct: 98 VSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIH 157
Query: 283 SWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNME 342
+K GL + V++ +VD+Y KC G +
Sbjct: 158 GLAVKLGLSEDVRVNNSLVDMYSKC-------------------------------GYLT 186
Query: 343 EARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGAC 402
EA+ FD KN V W + G F+L E +E + + + ++ +L AC
Sbjct: 187 EAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPAC 246
Query: 403 ALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYN 462
+ L KE+H Y +R G Q D+ + + V Y+KCG + AE +F + + + +N
Sbjct: 247 LEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWN 306
Query: 463 VMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
+I A +G KA+ L+ +M G+ PD T ++L A H S+ G++
Sbjct: 307 ALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKE 358
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 81/174 (46%), Gaps = 3/174 (1%)
Query: 377 DLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDM 436
D+ + +T D ++ AC G+ IH +++MG+ +D + + L+ M
Sbjct: 16 DMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIAM 75
Query: 437 YSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML--EKGIKPDAV 494
Y K G + A +F R+LV +N +I+ ++ +G + + EM+ E+G+ PD
Sbjct: 76 YGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIA 135
Query: 495 TFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
T V +L V+MG + + + +S + ++D+Y + L +A
Sbjct: 136 TLVTVLPVCAREVDVQMGIR-IHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEA 188
>gi|357516987|ref|XP_003628782.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522804|gb|AET03258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1002
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 201/684 (29%), Positives = 333/684 (48%), Gaps = 113/684 (16%)
Query: 31 LIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTY 90
L+ +Y K +L ++ K+FDEMP R K +D V +
Sbjct: 250 LVDMYGKCGVLEDAEKVFDEMPNR-------------KRND----------------VVW 280
Query: 91 NSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAF 150
NSM+ GY+ G +A+ LF +M+ + + E +++ + C L V G+Q HA
Sbjct: 281 NSMIVGYVQ-NGMNVEAVGLFEKMR-FEGGVEPSEVSLSGFFSACANLEAVEEGKQGHAL 338
Query: 151 MVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEM 210
++ + + SS+++ YSK G EEV L+ ++ V
Sbjct: 339 VILMGFELNYVLGSSIMNFYSKV-----------GLIEEVELVFRSMAV----------- 376
Query: 211 ALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL--FVRMGENGVRWNEHTFASALSA 268
L D V+WN +IS YVQ G E+ L++ ++R EN +R++ T +S L+
Sbjct: 377 ----------LKDEVTWNLMISSYVQFGMFEKALEMCHWMREEEN-LRFDCVTLSSLLAL 425
Query: 269 CCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR----- 323
R+VK K++H + ++N S+ V SG++D+Y KC M+ A + G +
Sbjct: 426 AADTRDVKLGKKLHGFCIRNEFYSDMAVLSGVLDMYAKCGIMDCARGVFHFAGKKKDIVL 485
Query: 324 -------------------------------NSFSISSMIVGYSLQGNMEEARRHFDSL- 351
N S +S+I G+ G + EA+ F +
Sbjct: 486 WNTMLAACAEKGLSGEALKLFFQMQMESVPPNVVSWNSLIFGFFRNGQVVEAQDMFSEMQ 545
Query: 352 ---TEKNVVVWTALFSGYVKAQNC---EALFDLLSEFVTKEGVVTDALILVILLGACALQ 405
N++ WT + SG AQN EA + + + G+ +++ + L AC
Sbjct: 546 LSGVTPNLITWTTMISGL--AQNGLGYEA--SRVFQQMQGAGMRPNSISITSALSACTNM 601
Query: 406 AALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMI 465
A L+ G+ IH Y++R + ++ ++++DMY+KCGN+ A+ +F ++L +YN MI
Sbjct: 602 ALLNYGRSIHGYVMRNFMSFSLQITTSIIDMYAKCGNLDDAKFVFIICSTKELPVYNAMI 661
Query: 466 ACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKI 525
+ YA HG +A+ LF+E++++GI PD +TF ++LSA H ++ G + F M + ++
Sbjct: 662 SAYASHGKSAEALALFQELVKQGIMPDHITFTSVLSACSHGRLLKEGLELFKYMVCELQM 721
Query: 526 SPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEE 585
P HY C++ L QL++A+ + ++P+ DA ILGS L C N ELA +
Sbjct: 722 KPSEKHYGCLVKLLTNDGQLDEALRIILTMPSPPDAHILGSLLAACGQNHETELANYIAK 781
Query: 586 KLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFT 645
LL++E NN YV L+NVYAA G W E+ IR M+ + GCSW+ V E+++F
Sbjct: 782 WLLKVEPNNPGNYVALSNVYAALGKWDEVSNIRGFMKEKGLKKIPGCSWIEVGQELNVFI 841
Query: 646 VGDVSHPKTNAIYSVLAIFTGELY 669
D SHP+ IY +L + E+Y
Sbjct: 842 ASDKSHPEKEEIYKILDLLGFEMY 865
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 149/578 (25%), Positives = 248/578 (42%), Gaps = 108/578 (18%)
Query: 5 NLKEALICHVQAIKAGLTLTT--ITTNQLIHIYSKHNLLRESRKLF-DEMPERNVFSWNT 61
+L L H IK G + +T ++L+ +Y+K NL R + F + + +N+FS+
Sbjct: 118 DLSLGLQIHAHLIKKGSSYSTNEFVESKLVILYAKCNLTRVAVHFFRNVVKNQNLFSYAA 177
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
I+ QAR+ G +AL ++EM ++
Sbjct: 178 IVGL--------QARN------------------------GLYKEALLSYVEMM--EKGF 203
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASG--FAVSSLIDMYSKCRCYEEA 179
D F V + L C L +GFGR +H F+VK N+ G + +SL+DMY KC E+A
Sbjct: 204 CPDNFVVPNGLKACGGLRWIGFGRGIHGFVVKMGNEFDGCVYVATSLVDMYGKCGVLEDA 263
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
+VF+ EM + + ND V WN++I GYVQNG
Sbjct: 264 EKVFD------------------------EMPNR------KRNDVV-WNSMIVGYVQNGM 292
Query: 240 AEEGLKLFVRMG-ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
E + LF +M E GV +E + + SAC L V+ K+ H+ V+ G N + S
Sbjct: 293 NVEAVGLFEKMRFEGGVEPSEVSLSGFFSACANLEAVEEGKQGHALVILMGFELNYVLGS 352
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE-KNVV 357
I++ Y K G +EE F S+ K+ V
Sbjct: 353 SIMNFYSKV-------------------------------GLIEEVELVFRSMAVLKDEV 381
Query: 358 VWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
W + S YV+ E ++ +E + D + L LL A + GK++H +
Sbjct: 382 TWNLMISSYVQFGMFEKALEMCHWMREEENLRFDCVTLSSLLALAADTRDVKLGKKLHGF 441
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQ-NFIERDLVLYNVMIACYAHHGHEEK 476
+R D ++S ++DMY+KCG M A +F ++D+VL+N M+A A G +
Sbjct: 442 CIRNEFYSDMAVLSGVLDMYAKCGIMDCARGVFHFAGKKKDIVLWNTMLAACAEKGLSGE 501
Query: 477 AILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMI 536
A+ LF +M + + P+ V++ +++ F G V + F+ M ++P + MI
Sbjct: 502 ALKLFFQMQMESVPPNVVSWNSLIFGFFRNGQVVEAQDMFSEMQLS-GVTPNLITWTTMI 560
Query: 537 DLY---GRANQLEKAIEFMKSIPTEEDAVILGSFLNVC 571
G + + + M+ +++ + S L+ C
Sbjct: 561 SGLAQNGLGYEASRVFQQMQGAGMRPNSISITSALSAC 598
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 118/492 (23%), Positives = 209/492 (42%), Gaps = 87/492 (17%)
Query: 114 MQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVK--TSNDASGFAVSSLIDMYS 171
+ +H + L CV ++ G Q+HA ++K +S + F S L+ +Y+
Sbjct: 92 LSQLPQHTPIGPDIYGELLQGCVYARDLSLGLQIHAHLIKKGSSYSTNEFVESKLVILYA 151
Query: 172 KCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLI 231
KC A F + NL S A+V R
Sbjct: 152 KCNLTRVAVHFFRNVVKNQNLFSYAAIVGLQAR--------------------------- 184
Query: 232 SGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG-- 289
NG +E L +V M E G + + L AC GLR + + IH +V+K G
Sbjct: 185 -----NGLYKEALLSYVEMMEKGFCPDNFVVPNGLKACGGLRWIGFGRGIHGFVVKMGNE 239
Query: 290 LISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFD 349
+V++ +VD+Y KC G +E+A + FD
Sbjct: 240 FDGCVYVATSLVDMYGKC-------------------------------GVLEDAEKVFD 268
Query: 350 SLT--EKNVVVWTALFSGYVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQA 406
+ ++N VVW ++ GYV+ N EA+ L + + GV + L ACA
Sbjct: 269 EMPNRKRNDVVWNSMIVGYVQNGMNVEAV-GLFEKMRFEGGVEPSEVSLSGFFSACANLE 327
Query: 407 ALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMI 465
A+ GK+ HA ++ MG +++ L S++++ YSK G + E++F++ + +D V +N+MI
Sbjct: 328 AVEEGKQGHALVILMGFELNYVLGSSIMNFYSKVGLIEEVELVFRSMAVLKDEVTWNLMI 387
Query: 466 ACYAHHGHEEKAILLFEEML-EKGIKPDAVTFVAILSAFRHCGSVEMGEKYF-----NSM 519
+ Y G EKA+ + M E+ ++ D VT ++L+ V++G+K N
Sbjct: 388 SSYVQFGMFEKALEMCHWMREEENLRFDCVTLSSLLALAADTRDVKLGKKLHGFCIRNEF 447
Query: 520 TADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAEL 579
+D + + ++D+Y + ++ A ++D V+ + L C L
Sbjct: 448 YSDMAV------LSGVLDMYAKCGIMDCARGVFHFAGKKKDIVLWNTMLAAC---AEKGL 498
Query: 580 AGEAEEKLLRLE 591
+GEA + +++
Sbjct: 499 SGEALKLFFQMQ 510
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 107/259 (41%), Gaps = 17/259 (6%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
M+ ++ I A+ A + + + IH Y N + S ++
Sbjct: 579 MQGAGMRPNSISITSALSACTNMALLNYGRSIHGYVMRNFMSFSLQIT-----------T 627
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
+II K +L A+ +F K+L YN+M+ Y + G A+AL LF E+ +
Sbjct: 628 SIIDMYAKCGNLDDAKFVFIICSTKELPVYNAMISAYA-SHGKSAEALALFQEL--VKQG 684
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMV-KTSNDASGFAVSSLIDMYSKCRCYEEA 179
I D T TS L+ C + G +L +MV + S L+ + + +EA
Sbjct: 685 IMPDHITFTSVLSACSHGRLLKEGLELFKYMVCELQMKPSEKHYGCLVKLLTNDGQLDEA 744
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMA--LKTFWRQPELNDAVSWNTLISGYVQN 237
R+ + +++AAC + E E+A + + + E N+ ++ L + Y
Sbjct: 745 LRIILTMPSPPDAHILGSLLAACGQNHETELANYIAKWLLKVEPNNPGNYVALSNVYAAL 804
Query: 238 GDAEEGLKLFVRMGENGVR 256
G +E + M E G++
Sbjct: 805 GKWDEVSNIRGFMKEKGLK 823
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 184/656 (28%), Positives = 332/656 (50%), Gaps = 18/656 (2%)
Query: 28 TNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPH--K 85
T +LIH+Y+ L + LF P + ++++A + L A S FD+ P +
Sbjct: 62 TLRLIHLYTLSGDLPAAATLFRADP--CPVAATSLVAAYAAAGRLPAAVSFFDAVPQARR 119
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR 145
D V +N+++ Y A + A A+ +F + ++ +R D+++ T+ L+ L N+
Sbjct: 120 DTVLHNAVISAYARAS-HAAPAVAVFRSLLASGS-LRPDDYSFTALLSAAGHLPNISVRH 177
Query: 146 --QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYE---EACRVFEGCTEEVNLISKNAMVA 200
QL ++K+ ++L+ +Y KC E +A +V + ++ + ++ MV
Sbjct: 178 CAQLQCSVLKSGAGGVLSVSNALVALYMKCEALEATRDARKVLDEMPDK-DALTWTTMVV 236
Query: 201 ACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEH 260
R G++ A ++ + + ++ V WN +ISGYV +G E +LF RM V +E
Sbjct: 237 GYVRRGDVGAA-RSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEF 295
Query: 261 TFASALSACCGLRNVKCAKEIHSWV--LKNGLISNPF--VSSGIVDVYCKCENMNYAESM 316
TF S LSAC K +H + L+ + V++ +V +Y KC N+ A +
Sbjct: 296 TFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRI 355
Query: 317 LLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALF 376
++ S ++++ GY +++A F+ + KN + W + SGYV E
Sbjct: 356 FDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDAL 415
Query: 377 DLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDM 436
L + + E V + AC +L GK++H +++++G + + L+ M
Sbjct: 416 KLFNR-MRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITM 474
Query: 437 YSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTF 496
Y++CG + A ++F D V +N MI+ HGH +A+ LF+ M+ +GI PD ++F
Sbjct: 475 YARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISF 534
Query: 497 VAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIP 556
+ +L+A H G V+ G +YF SM D+ I P DHY +IDL GRA ++ +A + +K++P
Sbjct: 535 LTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMP 594
Query: 557 TEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGR 616
E I + L+ CR + + EL A ++L ++ + Y+ L+N Y+A G W + R
Sbjct: 595 FEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGRWVDAAR 654
Query: 617 IRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
+RK MR + GCSW+ +++H+F VGD HP+ + +Y L + + ++
Sbjct: 655 VRKLMRDRGVKKEPGCSWIEAGNKVHVFVVGDTKHPEAHKVYKFLEMVGARMRKLG 710
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 65/147 (44%), Gaps = 6/147 (4%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+LK H ++ G + N LI +Y++ ++E+ +F MP + SWN +IS
Sbjct: 445 SLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMIS 504
Query: 65 ACIKSHDLKQARSLFD----SSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
A + ++A LFD + D +++ ++L N G + + F M+ D
Sbjct: 505 ALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTA-CNHSGLVDEGFQYFESMKR-DFG 562
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQL 147
I E T ++L + +G R L
Sbjct: 563 IIPGEDHYTRLIDLLGRAGRIGEARDL 589
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 178/609 (29%), Positives = 310/609 (50%), Gaps = 70/609 (11%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
+VF N +I + L AR LFD +KD+V++++M+ Y + G +AL L +M
Sbjct: 158 DVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSY-DRSGLLDEALDLLRDM 216
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSN-DASGFAV-SSLIDMYSK 172
++ E + S ++ +L ++ G+ +HA++++ SG + ++LIDMY K
Sbjct: 217 HVM--RVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVK 274
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C A RVF+G +SK +++ SW +I+
Sbjct: 275 CENLAYARRVFDG-------LSKASII--------------------------SWTAMIA 301
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
Y+ + EG++LFV+M G+ NE T S + C ++ K +H++ L+NG
Sbjct: 302 AYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTL 361
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
+ +++ +D+Y KC G++ AR FDS
Sbjct: 362 SLVLATAFIDMYGKC-------------------------------GDVRSARSVFDSFK 390
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
K++++W+A+ S Y + + FD+ +T G+ + +V LL CA +L GK
Sbjct: 391 SKDLMMWSAMISSYAQNNCIDEAFDIFVH-MTGCGIRPNERTMVSLLMICAKAGSLEMGK 449
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
IH+YI + G++ D L ++ VDMY+ CG++ A +F +RD+ ++N MI+ +A HG
Sbjct: 450 WIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHG 509
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
H E A+ LFEEM G+ P+ +TF+ L A H G ++ G++ F+ M ++ +P+ +HY
Sbjct: 510 HGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHY 569
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
CM+DL GRA L++A E +KS+P + + GSFL C+L++N +L A ++ L LE
Sbjct: 570 GCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEP 629
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
+ V ++N+YA+ W ++ IR+ M+ + G S + V +H F +GD HP
Sbjct: 630 HKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIMGDREHP 689
Query: 653 KTNAIYSVL 661
+Y ++
Sbjct: 690 DAKKVYEMI 698
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/447 (25%), Positives = 201/447 (44%), Gaps = 70/447 (15%)
Query: 104 EADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV 163
ADA K++ M+ D + D F + S L C + + G+++H F+VK F
Sbjct: 105 PADAAKIYAYMRGTDTEV--DNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVC 162
Query: 164 SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELND 223
++LI MYS+ G + +A + + + E D
Sbjct: 163 NALIMMYSEV--------------------------------GSLALA-RLLFDKIENKD 189
Query: 224 AVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHS 283
VSW+T+I Y ++G +E L L M V+ +E S L ++K K +H+
Sbjct: 190 VVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHA 249
Query: 284 WVLKNGLISNPFVS--SGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNM 341
+V++NG V + ++D+Y KCEN+ Y
Sbjct: 250 YVMRNGKCGKSGVPLCTALIDMYVKCENLAY----------------------------- 280
Query: 342 EEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGA 401
ARR FD L++ +++ WTA+ + Y+ N L + + EG+ + + ++ L+
Sbjct: 281 --ARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLG-EGMFPNEITMLSLVKE 337
Query: 402 CALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLY 461
C AL GK +HA+ LR G + L + +DMY KCG++ A +F +F +DL+++
Sbjct: 338 CGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMW 397
Query: 462 NVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTA 521
+ MI+ YA + ++A +F M GI+P+ T V++L GS+EMG K+ +S
Sbjct: 398 SAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMG-KWIHSYID 456
Query: 522 DYKISPETDHYACMIDLYGRANQLEKA 548
I + +D+Y ++ A
Sbjct: 457 KQGIKGDMILKTSFVDMYANCGDIDTA 483
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 184/417 (44%), Gaps = 51/417 (12%)
Query: 230 LISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG 289
LI+ Y++N + K++ M + S L ACC + + +E+H +V+KNG
Sbjct: 95 LITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNG 154
Query: 290 LISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFD 349
+ FV +++I+ YS G++ AR FD
Sbjct: 155 FHGDVFVC-------------------------------NALIMMYSEVGSLALARLLFD 183
Query: 350 SLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALH 409
+ K+VV W+ + Y ++ + DLL + V + ++ + A A L
Sbjct: 184 KIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMR-VKPSEIGMISITHVLAELADLK 242
Query: 410 PGKEIHAYILRMGV--QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIAC 467
GK +HAY++R G + L + L+DMY KC N+ YA +F + ++ + MIA
Sbjct: 243 LGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAA 302
Query: 468 YAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISP 527
Y H + + + LF +ML +G+ P+ +T ++++ G++E+G K ++ T +
Sbjct: 303 YIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELG-KLLHAFTLRNGFTL 361
Query: 528 ETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKL 587
ID+YG+ + A S + +D ++ + ++ N + EA +
Sbjct: 362 SLVLATAFIDMYGKCGDVRSARSVFDSFKS-KDLMMWSAMISSYAQNNCID---EAFDIF 417
Query: 588 LRLEG----NNKARYVQLANVYAAEGNWAEMGR-----IRKQMRGMKGNRFAGCSWV 635
+ + G N+ V L + A G+ EMG+ I KQ G+KG+ S+V
Sbjct: 418 VHMTGCGIRPNERTMVSLLMICAKAGSL-EMGKWIHSYIDKQ--GIKGDMILKTSFV 471
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 103/259 (39%), Gaps = 67/259 (25%)
Query: 11 ICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSH 70
+ H ++ G TL+ + I +Y K +R +R +FD +++ W+ +IS+ +++
Sbjct: 349 LLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNN 408
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
+ +A FD +F+ M IR +E T+ S
Sbjct: 409 CIDEA---FD-----------------------------IFVHMTGCG--IRPNERTMVS 434
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L +C K ++ G+ +H+++ K +S +DMY+ C + A R+F T+
Sbjct: 435 LLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDR- 493
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
D WN +ISG+ +G E L+LF M
Sbjct: 494 --------------------------------DISMWNAMISGFAMHGHGEAALELFEEM 521
Query: 251 GENGVRWNEHTFASALSAC 269
GV N+ TF AL AC
Sbjct: 522 EALGVTPNDITFIGALHAC 540
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 78/159 (49%), Gaps = 1/159 (0%)
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
N + + L + Y+K NC A + ++ D ++ +L AC L + G+E+
Sbjct: 88 NAAIHSFLITSYIK-NNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEV 146
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
H ++++ G D + + L+ MYS+ G++ A ++F +D+V ++ MI Y G
Sbjct: 147 HGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLL 206
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
++A+ L +M +KP + ++I +++G+
Sbjct: 207 DEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGK 245
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 185/587 (31%), Positives = 289/587 (49%), Gaps = 68/587 (11%)
Query: 75 ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNL 134
AR +FD+ +KD+V++ M+ Y+ E +E ++LKLF M+ + + FT S L
Sbjct: 199 ARQVFDAIEYKDMVSWTGMVACYVENECFE-ESLKLFSRMRIVG--FKPNNFTFASVLKA 255
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
CV L G+ +H KTS F LID+Y K
Sbjct: 256 CVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIK---------------------- 293
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
G+++ AL+ F P+ +D + W+ +I+ Y Q+ +EE +++F RM
Sbjct: 294 ----------SGDVDDALQVFEEMPK-DDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGL 342
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
V N+ T AS L AC L +++ +IH V+K GL N FVS+ ++D+Y KC
Sbjct: 343 VLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKC------- 395
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEA 374
G ME + + F V W + GYV+A N E
Sbjct: 396 ------------------------GRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEK 431
Query: 375 LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLV 434
L + + + V + +L ACA AAL PG +IH+ ++ + + + L+
Sbjct: 432 ALILFKDMLECQ-VQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALI 490
Query: 435 DMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAV 494
DMY+KCGN+ A ++F E D V +N MI+ Y+ HG +A+ FE MLE KPD V
Sbjct: 491 DMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKV 550
Query: 495 TFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKS 554
TFV ILSA + G ++ G+ YF SM +Y I P +HY CM+ L GR+ L+KA + +
Sbjct: 551 TFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHE 610
Query: 555 IPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEM 614
IP E ++ + L+ C ++ + EL + +++L +E ++A +V L+N+YA W +
Sbjct: 611 IPFEPSVMVWRALLSACVIHNDVELGRISAQRVLEIEPEDEATHVLLSNIYANARRWGNV 670
Query: 615 GRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
IR M+ + G SW+ + +H F+VGD SHP T I +L
Sbjct: 671 ASIRTSMKRKGIRKEPGLSWIENQGRVHYFSVGDTSHPDTKLINGML 717
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 137/536 (25%), Positives = 231/536 (43%), Gaps = 100/536 (18%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + IK G L N L++ Y K++ L ++ KLFDEMP+RN S+ T+I +
Sbjct: 67 HCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRF 126
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+A LF + EG+E ++ F ++ L
Sbjct: 127 SEAIGLFSR----------------LQGEGHE------------------LNPFVFSTVL 152
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
L V G +HA + K D+ F ++LID YS C E A +VF+
Sbjct: 153 KLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAI------ 206
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
E D VSW +++ YV+N EE LKLF RM
Sbjct: 207 ---------------------------EYKDMVSWTGMVACYVENECFEESLKLFSRMRI 239
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G + N TFAS L AC GL K +H K + FV ++D+Y K
Sbjct: 240 VGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIK------ 293
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G++++A + F+ + + +V+ W+ + + Y +++
Sbjct: 294 -------------------------SGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQS 328
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
E ++ + + V+ + L LL ACA L G +IH +++++G+ M+ + +
Sbjct: 329 EEAIEMFCR-MRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNA 387
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
L+DMY+KCG M + +F V +N +I Y G+ EKA++LF++MLE ++
Sbjct: 388 LMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGT 447
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
VT+ ++L A ++E G + +S++ T +ID+Y + ++ A
Sbjct: 448 EVTYSSVLRACAGIAALEPGSQ-IHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDA 502
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 154/316 (48%), Gaps = 36/316 (11%)
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I IKS D+ A +F+ P D++ ++ M+ Y +E E +A+++F M+ +
Sbjct: 287 LIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSE-EAIEMFCRMRRG--LV 343
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
++FT+ S L C L+++ G Q+H +VK D + F ++L+DMY+KC
Sbjct: 344 LPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKC-------- 395
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
G ME +L+ F P D VSWNT+I GYVQ G+ E
Sbjct: 396 ------------------------GRMENSLQLFSESPNCTD-VSWNTVIVGYVQAGNGE 430
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
+ L LF M E V+ E T++S L AC G+ ++ +IHS +K N V + ++
Sbjct: 431 KALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALI 490
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D+Y KC N+ A + + + S ++MI GYS+ G EA + F+S+ E
Sbjct: 491 DMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKV 550
Query: 362 LFSGYVKAQNCEALFD 377
F G + A + L D
Sbjct: 551 TFVGILSACSNAGLLD 566
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 152/350 (43%), Gaps = 53/350 (15%)
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCA--KEIHSWVLKNGLISNPFVSSGIVDVYCK 306
R + +N + + S L +C +RN CA K +H ++K G + F ++ +++ Y K
Sbjct: 34 RTSHSSPEFNTYIYGSLLQSC--IRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVK 91
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
+++ +A + FD + ++N V + L GY
Sbjct: 92 YDSL-------------------------------PDAAKLFDEMPDRNTVSFVTLIQGY 120
Query: 367 VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMD 426
+ L S + EG + + +L G +HA + ++G D
Sbjct: 121 SQCLRFSEAIGLFSR-LQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSD 179
Query: 427 KKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
+ + L+D YS CG A +F +D+V + M+ACY + E+++ LF M
Sbjct: 180 AFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRI 239
Query: 487 KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY------ACMIDLYG 540
G KP+ TF ++L A C +G + FN A + + +T + +IDLY
Sbjct: 240 VGFKPNNFTFASVLKA---C----VGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYI 292
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRL 590
++ ++ A++ + +P +D VI SF+ + R + +E + EA E R+
Sbjct: 293 KSGDVDDALQVFEEMP--KDDVIPWSFM-IARYAQ-SEQSEEAIEMFCRM 338
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 108/252 (42%), Gaps = 40/252 (15%)
Query: 4 LNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
L L + CHV +K GL + +N L+ +Y+K + S +LF E P SWNT+I
Sbjct: 363 LQLGNQIHCHV--VKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVI 420
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
GY+ A G AL LF +M ++
Sbjct: 421 -------------------------------VGYVQA-GNGEKALILFKDMLEC--QVQG 446
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
E T +S L C + + G Q+H+ VKT D + ++LIDMY+KC ++A VF
Sbjct: 447 TEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVF 506
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN---DAVSWNTLISGYVQNGDA 240
+ E + +S NAM++ G ALKTF E D V++ ++S G
Sbjct: 507 DMLREH-DQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLL 565
Query: 241 EEGLKLFVRMGE 252
+ G F M E
Sbjct: 566 DRGQAYFKSMVE 577
>gi|147805932|emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]
Length = 841
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 182/620 (29%), Positives = 313/620 (50%), Gaps = 94/620 (15%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
+++ N +++ + L+ + LF+S P++D +NSM+ Y A G +A+ LFI M
Sbjct: 296 DLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYA-AFGCHEEAMDLFIRM 354
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLN-VGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKC 173
QS E ++ DE TV L++C +L + + G+ LHA ++K+ ++L+ MY++
Sbjct: 355 QS--EGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTEL 412
Query: 174 RCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISG 233
C E ++F+ + + D +SWNT+I
Sbjct: 413 NCVESVQKIFD---------------------------------RMKGVDIISWNTMILA 439
Query: 234 YVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISN 293
+N + +LF RM E+ ++ N +T S L+AC + + + IH +V+K+ + N
Sbjct: 440 LARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEIN 499
Query: 294 PFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
+ + + D+Y C G+ AR F+ +
Sbjct: 500 QPLRTALADMYMNC-------------------------------GDEATARDLFEGCPD 528
Query: 354 KNVVVWTALFSGYVKAQ-NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
++++ W A+ KA+ N + ++LS F A L G+
Sbjct: 529 RDLISWNAMIX---KAEPNSVTIINVLSSFTH--------------------LATLPQGQ 565
Query: 413 EIHAYILRMG--VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
+HAY+ R G + +D L + + MY++CG++ AE IF+ +R+++ +N MIA Y
Sbjct: 566 SLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGM 625
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD 530
+G A+L F +MLE G +P+ VTFV++LSA H G +EMG + F+SM D+ ++PE
Sbjct: 626 NGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELV 685
Query: 531 HYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRL 590
HY+C++DL R +++A EF+ S+P E DA + + L+ CR +A+ A EKL +L
Sbjct: 686 HYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKL 745
Query: 591 EGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVS 650
E N YV L+NVYA G W E+ RIR ++ + G SW+ V++++H F+ GD S
Sbjct: 746 EPMNAGNYVLLSNVYATAGLWLEVRRIRTWLKEKGLRKPPGISWIIVKNQVHCFSAGDRS 805
Query: 651 HPKTNAIYSVLAIFTGELYE 670
HP+++ IY+ L+I + E
Sbjct: 806 HPQSDKIYAKLSILLSSMRE 825
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 202/444 (45%), Gaps = 71/444 (15%)
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
++ AR +FD+ +D+V +N+M+ GY+ YE +A+ L EM E++R + T+ +
Sbjct: 111 VEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYE-EAMLLVREM--GRENLRPNSRTMVAL 167
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSN-DASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L C + GR +H + ++ D++ ++LI Y +
Sbjct: 168 LLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLRF----------------- 210
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
+M + L + + + VSWN +ISGY GD + L+LFV+M
Sbjct: 211 ----------------DMRV-LPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQM 253
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
+ V+++ T A+ AC L ++K K+IH +K
Sbjct: 254 LVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIK----------------------F 291
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
+ E + +L + N YS G++E + + F+S+ ++ +W ++ S Y
Sbjct: 292 EFVEDLYILNALLNM---------YSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFG 342
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGAC-ALQAALHPGKEIHAYILRMGVQMDKKL 429
E DL + EGV D +VI+L C L + L GK +HA++++ G+++D L
Sbjct: 343 CHEEAMDLFIR-MQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASL 401
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+ L+ MY++ + + IF D++ +N MI A + +A LFE M E I
Sbjct: 402 GNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEI 461
Query: 490 KPDAVTFVAILSAFRHCGSVEMGE 513
KP++ T ++IL+A ++ G
Sbjct: 462 KPNSYTIISILAACEDVTCLDFGR 485
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 163/364 (44%), Gaps = 39/364 (10%)
Query: 210 MALKTFWRQP---ELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASAL 266
M L+ P ++ D WN++I + + L + +M GV N T L
Sbjct: 8 MGLQRLTLSPTKIQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVL 67
Query: 267 SACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSF 326
AC V+ K IH + L+ + V + +VD YCKC
Sbjct: 68 KACAAQNAVERGKSIHRSIQGTDLMDDVRVGTAVVDFYCKC------------------- 108
Query: 327 SISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKE 386
G +E+AR FD++++++VV+W A+ GYV C LL + +E
Sbjct: 109 ------------GFVEDARCVFDAMSDRDVVLWNAMVYGYV-GWGCYEEAMLLVREMGRE 155
Query: 387 GVVTDALILVILLGACALQAALHPGKEIHAYILRMGV-QMDKKLISTLVDMYSKCGNMTY 445
+ ++ +V LL AC + L G+ +H Y LR G+ + + + L+ Y + +M
Sbjct: 156 NLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLRF-DMRV 214
Query: 446 AEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRH 505
++F + R++V +N MI+ Y G KA+ LF +ML +K D VT + + A
Sbjct: 215 LPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAE 274
Query: 506 CGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILG 565
GS+++G K + + ++ + ++++Y LE + + +S+P DA +
Sbjct: 275 LGSLKLG-KQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPN-RDAPLWN 332
Query: 566 SFLN 569
S ++
Sbjct: 333 SMIS 336
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 169/426 (39%), Gaps = 123/426 (28%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H IK+G+ + N L+ +Y++ N + +K+FD M ++ SWNT+I L
Sbjct: 387 HAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMI--------L 438
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
AR+ A A +LF M+ ++ I+ + +T+ S L
Sbjct: 439 ALARNTL------------------------RAQACELFERMRESE--IKPNSYTIISIL 472
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C + + FGR +H +++K S + + ++L DMY C A +FEGC + +L
Sbjct: 473 AACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDR-DL 531
Query: 193 ISKNAMVAAC-------------------------------------------------- 202
IS NAM+
Sbjct: 532 ISWNAMIXKAEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITM 591
Query: 203 -CREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHT 261
R G ++ A F P+ N +SWN +I+GY NG + + F +M E+G R N T
Sbjct: 592 YARCGSLQSAENIFKTLPKRN-IISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVT 650
Query: 262 FASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESM-LLLK 320
F S LSAC HS ++ GL S + D E ++Y+ + LL +
Sbjct: 651 FVSVLSACS-----------HSGFIEMGL---QLFHSMVQDFNVTPELVHYSCIVDLLAR 696
Query: 321 GVRNSFSISSMIVGYSLQGNMEEARRHFDSLT-EKNVVVWTALFS---GYVKAQNCEALF 376
G G ++EAR DS+ E + VW AL S Y A+ + +F
Sbjct: 697 G-----------------GCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIF 739
Query: 377 DLLSEF 382
+ L +
Sbjct: 740 EKLDKL 745
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 106/240 (44%), Gaps = 21/240 (8%)
Query: 23 LTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSS 82
L T+ Q +H Y + R L ++ N F I+ + L+ A ++F +
Sbjct: 558 LATLPQGQSLHAY----VTRRGFSLGLDLSLANAF-----ITMYARCGSLQSAENIFKTL 608
Query: 83 PHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVG 142
P ++++++N+M+ GY G +DA+ F +M ++ R + T S L+ C +
Sbjct: 609 PKRNIISWNAMIAGY-GMNGRGSDAMLAFSQM--LEDGFRPNGVTFVSVLSACSHSGFIE 665
Query: 143 FGRQLHAFMVKTSNDASGFA-VSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAA 201
G QL MV+ N S ++D+ ++ C +EA + E + A++++
Sbjct: 666 MGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSS 725
Query: 202 CCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR-----MGENGVR 256
C + + A F + +L + N ++ + N A GL L VR + E G+R
Sbjct: 726 CRAYSDAKQAKTIFEKLDKLEPMNAGNYVL---LSNVYATAGLWLEVRRIRTWLKEKGLR 782
>gi|296084817|emb|CBI27699.3| unnamed protein product [Vitis vinifera]
Length = 807
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 178/608 (29%), Positives = 313/608 (51%), Gaps = 42/608 (6%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N+++S ++ +++A LF + +DLV++N+++ GY + G AL+LF E S E
Sbjct: 225 NSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYA-SNGEWLKALELFSEFISL-E 282
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV-SSLIDMYSKCRCYEE 178
I+ D T+ S L C + N+ + +H ++++ +V ++L+ Y+KC +
Sbjct: 283 TIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQA 342
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
A + F +IS+ D +SWN ++ + ++G
Sbjct: 343 ALQTFL-------MISRK--------------------------DLISWNAILDAFTESG 369
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI---SNPF 295
+ L M G+R + T + + + VK KE HS+ ++ GL+ + P
Sbjct: 370 CETHLVNLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPT 429
Query: 296 VSSGIVDVYCKCENMNYAESML-LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
+ +G++D Y KC NM YA ++ L RN + +SMI GY + ++A F++++E
Sbjct: 430 LGNGMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSET 489
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
++ W + Y + + L E + +G+ D + ++ +L ACA A++H ++
Sbjct: 490 DLTTWNLMVRVYAENDFPDQALSLFHE-LQGQGMKPDIVTIMSILPACAHMASVHMLRQC 548
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
H Y++R D +L +DMYSKCG++ A +F + ++DLV++ M+ +A HG
Sbjct: 549 HGYVIRACFN-DVRLNGAFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMG 607
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC 534
E+A+ +F MLE G+KPD V A+L A H G V+ G K FNS+ + P + YAC
Sbjct: 608 EEALRIFSYMLELGVKPDHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYAC 667
Query: 535 MIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNN 594
++DL R +++ A F+ +P E +A I G+ L CR + EL + L ++E +N
Sbjct: 668 VVDLLARGGRIKDAYTFVTRMPIEANANIWGTLLGACRTHHEVELGRVVADHLFKIESDN 727
Query: 595 KARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKT 654
YV ++N+YAA+ W + IR+ MR + + AGCSW+ V ++F GD SHP+
Sbjct: 728 IGNYVVMSNLYAADARWDGVMEIRRLMRTRELKKPAGCSWIEVGRRKNVFIAGDSSHPQR 787
Query: 655 NAIYSVLA 662
+ IY L+
Sbjct: 788 SIIYRTLS 795
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 133/517 (25%), Positives = 230/517 (44%), Gaps = 88/517 (17%)
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFT 127
KS L LF +D V +N +L G + +EA+ ++LF M +E + + T
Sbjct: 25 KSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNE-AKPNSVT 83
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
+ L +C +L G+ +H++++K+ ++ A ++LI MY+KC
Sbjct: 84 IAIVLPVCARLREDA-GKSVHSYVIKSGLESHTLAGNALISMYAKC-------------- 128
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
L+ +A A + + E D VSWN +I+G+ +N EE KLF
Sbjct: 129 ---GLVCSDAYAA---------------FNRIEFKDVVSWNAVIAGFSENKFTEEAFKLF 170
Query: 248 VRMGENGVRWNEHTFASALSACCGLR---NVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
M + ++ N T AS L C L + KE+H VL+
Sbjct: 171 HAMLKGPIQPNYATIASILPVCASLEENAGYRYGKEVHCHVLRR---------------- 214
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
++ V + I+S++ Y G ME+A F ++ +++V W A+ +
Sbjct: 215 --------------MELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIA 260
Query: 365 GYVKAQNCEAL--FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR-M 421
GY A N E L +L SEF++ E + D++ LV +L ACA L K IH YI+R
Sbjct: 261 GY--ASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHP 318
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFI---ERDLVLYNVMIACYAHHGHEEKAI 478
G++ D + + L+ Y+KC Y + Q F+ +DL+ +N ++ + G E +
Sbjct: 319 GLREDTSVGNALLSFYAKC---NYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLV 375
Query: 479 LLFEEMLEKGIKPDAVTFVAIL---SAFRHCGSVEMGEKY---FNSMTADYKISPETDHY 532
L ML +GI+PD++T + I+ +A V+ Y F + D P +
Sbjct: 376 NLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGD--AGPTLGN- 432
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLN 569
M+D Y + ++ A+ S+ + + V S ++
Sbjct: 433 -GMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMIS 468
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 174/374 (46%), Gaps = 53/374 (14%)
Query: 186 CTEEVNLISKNAMVAACCRE-GEMEMALKTFWRQPELNDAVSWNTLISGYV--QNGDAEE 242
C +NL +K+ + C + GEM+ D V WN ++SG Q+ +AE
Sbjct: 16 CKGLLNLYAKSGALDYCNKLFGEMDQ-----------RDPVIWNIVLSGLAGFQSHEAEV 64
Query: 243 GLKLFVRMGE-NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
++LF M N + N T A L C LR K +HS+V+K+GL S+ + ++
Sbjct: 65 -MRLFRAMHMVNEAKPNSVTIAIVLPVCARLRE-DAGKSVHSYVIKSGLESHTLAGNALI 122
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
+Y KC G+ S +A F+ + K+VV W A
Sbjct: 123 SMYAKC-------------GLVCS-----------------DAYAAFNRIEFKDVVSWNA 152
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACAL---QAALHPGKEIHAYI 418
+ +G+ + + E F L + K + + + +L CA A GKE+H ++
Sbjct: 153 VIAGFSENKFTEEAFKLFHAML-KGPIQPNYATIASILPVCASLEENAGYRYGKEVHCHV 211
Query: 419 L-RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
L RM + D +I++L+ Y + G M AE +F+N RDLV +N +IA YA +G KA
Sbjct: 212 LRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKA 271
Query: 478 ILLFEEMLE-KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMI 536
+ LF E + + IKPD+VT V++L A H ++++ + + + +T ++
Sbjct: 272 LELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALL 331
Query: 537 DLYGRANQLEKAIE 550
Y + N + A++
Sbjct: 332 SFYAKCNYTQAALQ 345
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 100/474 (21%), Positives = 196/474 (41%), Gaps = 75/474 (15%)
Query: 5 NLKEALICHVQAIK-AGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
NL+ A H I+ GL T N L+ Y+K N + + + F + +++ SWN I+
Sbjct: 303 NLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQTFLMISRKDLISWNAIL 362
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
A +S G E + L M E IR
Sbjct: 363 DAFTES--------------------------------GCETHLVNLLHWMLR--EGIRP 388
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVK---TSNDASGFAVSSLIDMYSKCRCYEEAC 180
D T+ + + + V ++ H++ ++ DA + ++D Y+KC + A
Sbjct: 389 DSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGMLDAYAKCGNMKYAV 448
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+F +E+ N+++ N+M++ + A F E D +WN ++ Y +N
Sbjct: 449 NIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSE-TDLTTWNLMVRVYAENDFP 507
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
++ L LF + G++ + T S L AC + +V ++ H +V++ ++ ++
Sbjct: 508 DQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIR-ACFNDVRLNGAF 566
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
+D+Y KC ++ A + L ++ ++M+ G+++ G EEA R F + E
Sbjct: 567 IDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLEL------ 620
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
GV D +I+ +L AC+ + G +I I +
Sbjct: 621 --------------------------GVKPDHVIITAVLFACSHAGLVDEGWKIFNSIEK 654
Query: 421 M-GVQMDKKLISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMI-ACYAHH 471
+ G Q + + +VD+ ++ G + A + + IE + ++ ++ AC HH
Sbjct: 655 VHGFQPTMEQYACVVDLLARGGRIKDAYTFVTRMPIEANANIWGTLLGACRTHH 708
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 116/243 (47%), Gaps = 16/243 (6%)
Query: 335 YSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEA-LFDLLSEFVTKEGVVTDAL 393
Y+ G ++ + F + +++ V+W + SG Q+ EA + L +++
Sbjct: 23 YAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEAKPNSV 82
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF 453
+ I+L CA + GK +H+Y+++ G++ + L+ MY+KCG + N
Sbjct: 83 TIAIVLPVCA-RLREDAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYAAFNR 141
Query: 454 IE-RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVE-- 510
IE +D+V +N +IA ++ + E+A LF ML+ I+P+ T +IL C S+E
Sbjct: 142 IEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPV---CASLEEN 198
Query: 511 ----MGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE----DAV 562
G++ + ++ + ++ Y R Q+EKA +++ + + +A+
Sbjct: 199 AGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAI 258
Query: 563 ILG 565
I G
Sbjct: 259 IAG 261
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYA-HHGHEEKAILLFEEM-LE 486
L L+++Y+K G + Y +F +RD V++N++++ A HE + + LF M +
Sbjct: 15 LCKGLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMV 74
Query: 487 KGIKPDAVTFVAILS 501
KP++VT +L
Sbjct: 75 NEAKPNSVTIAIVLP 89
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 190/650 (29%), Positives = 313/650 (48%), Gaps = 100/650 (15%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACI 67
+A H Q I+ +L+ + + +I IY+ LL E+ +F + V +W ++I C
Sbjct: 23 QAKQLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIR-CF 80
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFT 127
+SLF + AL F+EM+++ D
Sbjct: 81 TD------QSLF-------------------------SRALASFVEMRASGRC--PDHNV 107
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
S L C ++++ FG +H F+V+ D + ++L++MYSK + +VFE
Sbjct: 108 FPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFE--- 164
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
L+ + D VS+NT+I+GY Q+G E+ L++
Sbjct: 165 ----LMPRK--------------------------DVVSYNTVIAGYAQSGMYEDALRMV 194
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
MG + ++ + T +S L +V KEIH +V++ G+ S+ ++ S +VD+Y K
Sbjct: 195 REMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAK- 253
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
+E++ R F L ++ + W +L +GYV
Sbjct: 254 ------------------------------SARIEDSERVFSHLYRRDSISWNSLVAGYV 283
Query: 368 KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDK 427
+ L + V+ + V A+ ++ ACA A LH GK++H Y+LR G +
Sbjct: 284 QNGRYNEALRLFRQMVSAK-VRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNI 342
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
+ S LVDMYSKCGN+ A IF D V + +I +A HGH +A+ LFEEM +
Sbjct: 343 FIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQ 402
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEK 547
G+KP+ V FVA+L+A H G V+ YFNSMT Y ++ E +HYA + DL GRA +LE+
Sbjct: 403 GVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEE 462
Query: 548 AIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAA 607
A +F+ + E + + L+ C +++N ELA + EK+ ++ N YV + N+YA+
Sbjct: 463 AYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMGAYVLMCNMYAS 522
Query: 608 EGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
G W EM ++R ++R + CSW+ ++++ H F GD SHP + I
Sbjct: 523 NGRWKEMAKLRLRVRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDRI 572
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 176/627 (28%), Positives = 310/627 (49%), Gaps = 81/627 (12%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
NVF+ +++ K + A +FD P +DLV++N+++ G+ + G+ AL+L + M
Sbjct: 181 NVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGF-SQNGFAKKALELVLRM 239
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFA-----VSSLIDM 169
Q DE R D T+ + L + + G+ +H + ++ +GFA ++L DM
Sbjct: 240 Q--DEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIR-----AGFAKLVNISTALADM 292
Query: 170 YSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNT 229
YSKC E A +F+G ++ VSWN+
Sbjct: 293 YSKCGSVETARLIFDGMDQKT---------------------------------VVSWNS 319
Query: 230 LISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG 289
++ GYVQNG+ E+ + +F +M E G+ T AL AC L +++ K +H +V +
Sbjct: 320 MMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLN 379
Query: 290 LISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFD 349
L S+ V + ++ +Y KC+ ++ A + F+
Sbjct: 380 LGSDISVMNSLISMYSKCKRVDIASDI-------------------------------FN 408
Query: 350 SLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALH 409
+L + V W A+ GY + + SE + G+ D+ +V ++ A A +
Sbjct: 409 NLNGRTHVSWNAMILGYAQNGRVSEALNCFSE-MKSLGMKPDSFTMVSVIPALAELSVTR 467
Query: 410 PGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYA 469
K IH I+R + + + + LVDMYSKCG + A +F +R ++ +N MI Y
Sbjct: 468 HAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYG 527
Query: 470 HHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPET 529
HG A+ LF++M + ++P+ +T+++++SA H G V+ G ++F SM DY + P
Sbjct: 528 THGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSM 587
Query: 530 DHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLR 589
DHY M+DL GRA ++++A +F++++P + G+ L C++++N E+ +A +KL
Sbjct: 588 DHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFE 647
Query: 590 LEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDV 649
L + +V LAN+YA+ W+++ +RK M + GCS V + +E+H F G
Sbjct: 648 LNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGST 707
Query: 650 SHPKTNAIYSVLAIFTGELYEIAGAFY 676
+HP++ IY+ L +YEI A Y
Sbjct: 708 THPQSKRIYAFLEEL---VYEIKAAGY 731
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 138/548 (25%), Positives = 238/548 (43%), Gaps = 111/548 (20%)
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
++S K + +A +F+ K Y++ML GY E AL M+ D +
Sbjct: 87 LVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLET-ALAFLCRMRYDD--V 143
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+ + T L +C ++ G+++H ++ S A+ FA++ +++MY+KCR ++A +
Sbjct: 144 KPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYK 203
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F+ R PE D VSWNT+I+G+ QNG A+
Sbjct: 204 MFD--------------------------------RMPE-RDLVSWNTIIAGFSQNGFAK 230
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
+ L+L +RM + G R + T + L A + + K IH + ++ G +S+ +
Sbjct: 231 KALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALA 290
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D+Y KC G++E AR FD + +K VV W +
Sbjct: 291 DMYSKC-------------------------------GSVETARLIFDGMDQKTVVSWNS 319
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+ GYV+ E + E + +EG+ + ++ L ACA L GK +H ++ ++
Sbjct: 320 MMDGYVQNGEPEKAIAVF-EKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQL 378
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
+ D ++++L+ MYSKC + A IF N R V +N MI YA +G +A+ F
Sbjct: 379 NLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCF 438
Query: 482 EEMLEKGIKPDAVTFVAILSAF------RH-----------------------------C 506
EM G+KPD+ T V+++ A RH C
Sbjct: 439 SEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKC 498
Query: 507 GSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF---MKSIPTEEDAVI 563
G++ M K F+ ++ + I+ + MID YG A++ MK E + +
Sbjct: 499 GAIHMARKLFDMISDRHVIT-----WNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDIT 553
Query: 564 LGSFLNVC 571
S ++ C
Sbjct: 554 YLSVISAC 561
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 174/375 (46%), Gaps = 38/375 (10%)
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
+ +V+ + G + A + F + DA+ ++T++ GY +N E L RM +
Sbjct: 84 QTKLVSLFSKYGSINEAARVFEPIDDKLDAL-YHTMLKGYAKNSSLETALAFLCRMRYDD 142
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
V+ + F L C ++K KEIH ++ N +N F +G+V++Y KC ++
Sbjct: 143 VKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQID--- 199
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEA 374
+A + FD + E+++V W + +G+ + +
Sbjct: 200 ----------------------------DAYKMFDRMPERDLVSWNTIIAGFSQNGFAKK 231
Query: 375 LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLV 434
+L+ + EG D++ LV +L A A L GK IH Y +R G + + L
Sbjct: 232 ALELVLR-MQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALA 290
Query: 435 DMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAV 494
DMYSKCG++ A +IF ++ +V +N M+ Y +G EKAI +FE+MLE+GI P V
Sbjct: 291 DMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGV 350
Query: 495 TFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKS 554
T + L A G +E G K+ + + + +I +Y + +++ A + +
Sbjct: 351 TIMEALHACADLGDLERG-KFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNN 409
Query: 555 IPTEE----DAVILG 565
+ +A+ILG
Sbjct: 410 LNGRTHVSWNAMILG 424
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 108/482 (22%), Positives = 188/482 (39%), Gaps = 105/482 (21%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H AI+AG + L +YSK + +R +FD M ++ V SWN+++ ++
Sbjct: 271 HGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQ---- 326
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+ P K + + ML I+ G T+ L
Sbjct: 327 -------NGEPEKAIAVFEKMLEEGIDPTG-----------------------VTIMEAL 356
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C L ++ G+ +H F+ + + + ++SLI MYSKC+ + A +F +
Sbjct: 357 HACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTH- 415
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+S NAM I GY QNG E L F M
Sbjct: 416 VSWNAM--------------------------------ILGYAQNGRVSEALNCFSEMKS 443
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G++ + T S + A L + AK IH ++++ L N FV++ +VD+Y KC
Sbjct: 444 LGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKC----- 498
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G + AR+ FD +++++V+ W A+ GY
Sbjct: 499 --------------------------GAIHMARKLFDMISDRHVITWNAMIDGYGTHGLG 532
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG-KEIHAYILRMGVQMDKKLIS 431
A DL + + K V + + + ++ AC+ + G + + G++
Sbjct: 533 RAALDLFDK-MKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYG 591
Query: 432 TLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMI-ACYAHHG---HEEKAILLFEEMLE 486
+VD+ + G + A +N I + +Y M+ AC H E+ A LFE +
Sbjct: 592 AMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPD 651
Query: 487 KG 488
+G
Sbjct: 652 EG 653
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 116/271 (42%), Gaps = 42/271 (15%)
Query: 315 SMLLLKGVRNSFSISSMIVG-YSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE 373
+++ G+ N + +V +S G++ EA R F+ + +K ++ + GY K + E
Sbjct: 70 PLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLE 129
Query: 374 ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL 433
L + + V LL C A L GKEIH ++ + ++ +
Sbjct: 130 TALAFLCR-MRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGV 188
Query: 434 VDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDA 493
V+MY+KC + A +F ERDLV +N +IA ++ +G +KA+ L M ++G +PD+
Sbjct: 189 VNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDS 248
Query: 494 VTFVAILSA-----------------------------------FRHCGSVEMGEKYFNS 518
+T V +L A + CGSVE F+
Sbjct: 249 ITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDG 308
Query: 519 MTADYKISPETDHYACMIDLYGRANQLEKAI 549
M +S + M+D Y + + EKAI
Sbjct: 309 MDQKTVVS-----WNSMMDGYVQNGEPEKAI 334
>gi|414866530|tpg|DAA45087.1| TPA: hypothetical protein ZEAMMB73_840863 [Zea mays]
Length = 851
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 199/653 (30%), Positives = 326/653 (49%), Gaps = 93/653 (14%)
Query: 24 TTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA-CIKSHDLKQARSLFDSS 82
TT + N L+ Y +++L + ++F MP R++ S+N +IS ++ H L A + +
Sbjct: 47 TTASYNALLAGYFRNHLPDAALRVFHRMPTRDLASYNALISGLSLRRHTLPDAAAALATI 106
Query: 83 PHKD-LVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNV 141
P+ +V++ S+L GY+ G ADA++LF +M + HI +TV LL
Sbjct: 107 PYPPSVVSFTSLLRGYVR-HGLLADAIQLFRQMPERN-HI---SYTV---------LLG- 151
Query: 142 GFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAA 201
GF + +D EA ++F+ + ++++ AM++
Sbjct: 152 ------------------GFLDAGRVD---------EARKLFDEMPAK-DVVAWTAMLSG 183
Query: 202 CCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE-NGVRWNEH 260
C+ G ++ A F P+ N VSW ++SGY QNG KLF M E N V W
Sbjct: 184 YCQVGRVDEARTLFDEMPKRN-VVSWTAMVSGYAQNGQVNLARKLFEVMPERNEVSWTAM 242
Query: 261 TFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLK 320
F + ++ A+E L N + +P + C
Sbjct: 243 LFGYIQAG-----RIEDAEE-----LFNAMPDHPLAA---------C------------- 270
Query: 321 GVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLS 380
+ MIVG+ QG ++ A+ FD + E++ W+A+ Y + E L + LS
Sbjct: 271 --------NGMIVGFGQQGMVDAAKSVFDRMCERDDGTWSAIIKAY---EQNEFLMEALS 319
Query: 381 EF--VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYS 438
F + G+ + ++ +L CA A L G+E+H +LR MD +S L+ MY
Sbjct: 320 TFREMLHIGIRPNYPSVISILTVCAALAVLDYGREVHGAMLRRSFDMDIYAVSALITMYI 379
Query: 439 KCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVA 498
KCGN+ A+ +F F +D+V++N MI YA HG E+A+ +F++M G+ PD +T++
Sbjct: 380 KCGNLDKAKRVFHMFEPKDVVMWNSMITGYAQHGLGEEALHIFDDMRLAGMVPDGITYIG 439
Query: 499 ILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE 558
L+A + G V+ G FNSM I P +HYACM+DL GRA +++A+ +K++P E
Sbjct: 440 ALTACSYTGKVKEGRDIFNSMRTKSGIKPGLEHYACMVDLLGRAGLVDEALYLIKTMPVE 499
Query: 559 EDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIR 618
DAVI G+ + CR+++NAE+A + +KLL LE N YV L+++Y + G W + +R
Sbjct: 500 PDAVIWGALMGACRMHKNAEIAEISAKKLLELEPGNAGPYVLLSHIYTSSGRWEDASNMR 559
Query: 619 KQMRGMKGNRFAGCSWVYVEHEIHIFTVGDV-SHPKTNAIYSVLAIFTGELYE 670
K + N+ GCSW+ + +H+F GDV +H + +I +L G L E
Sbjct: 560 KFISSRHLNKSLGCSWIEYDKRVHLFKSGDVLAHQEHASILKMLEKLDGLLME 612
>gi|255568474|ref|XP_002525211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535508|gb|EEF37177.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 654
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 181/623 (29%), Positives = 313/623 (50%), Gaps = 43/623 (6%)
Query: 47 LFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEAD 106
LF PE + S +++ K++ L AR +FD PHK+ +YN+ML Y + D
Sbjct: 52 LFSVTPENYLAS--KLVALYSKTNHLAFARYVFDQIPHKNTFSYNAMLISY-SLHNRHGD 108
Query: 107 ALKLFIEMQSADEHIRMDEFTVTSTLNL--CVKLLNVGFGRQLHAFMVKTSNDASGFAVS 164
AL LF + S++ ++ ++T L L +V G+++H F+++T DA F +
Sbjct: 109 ALDLFSSLASSN---LVNNISITCLLKSLSSFTLSDVKLGKEVHGFVLRTGFDADVFVEN 165
Query: 165 SLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDA 224
+LI YSKC + + +VF+ T+ D
Sbjct: 166 ALITYYSKCYDLDLSRKVFDRMTKR---------------------------------DV 192
Query: 225 VSWNTLISGYVQNGDAEEGLKLFVRMGE-NGVRWNEHTFASALSACCGLRNVKCAKEIHS 283
VSWN++ISGY Q G E+ L+ M + +G R N T S L AC +++ E+H
Sbjct: 193 VSWNSMISGYSQGGLYEDCKTLYREMVDFSGFRPNGVTVVSVLQACGQTQDLAFGMEVHK 252
Query: 284 WVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEE 343
+++ N + + V + ++ +Y KC +++YA + ++ + ++I G L G +++
Sbjct: 253 FIVDNQVEIDISVCNALIGLYAKCGSLDYARELFDEMSEKDEVTYGAIISGLMLHGYVDQ 312
Query: 344 ARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACA 403
+ F + + + W A+ +G V+ E + DL+ E + G +A+ L +L A
Sbjct: 313 SLELFRGMKTQILSTWNAVITGLVQNNRHEGVLDLVRE-MQALGFRPNAVTLSSVLSTIA 371
Query: 404 LQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNV 463
++L GKEIH+Y +++G + + + ++DMY+K G + A+ +F +R LV++
Sbjct: 372 YFSSLKGGKEIHSYAIKIGYHRNIYVATAIIDMYAKSGYLRGAQRVFDQSKDRSLVIWTA 431
Query: 464 MIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADY 523
+I+ YA HG A+ LF EML++GI+PD VTF A+L+A HCG V+ + F SM Y
Sbjct: 432 IISAYAVHGDANLALGLFHEMLKQGIQPDPVTFTAVLAACAHCGMVDKAWEIFESMFKKY 491
Query: 524 KISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEA 583
I P +HYAC++ G+A +L +A EF+ +P E A + G+ L+ ++ + EL
Sbjct: 492 GIQPLVEHYACVVGALGKARRLSEAKEFVSKMPIEPSAKVWGALLHGASISSDVELGKSV 551
Query: 584 EEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHI 643
+ L +E N YV +AN+Y+ G W E +R++M + + G SW+ +
Sbjct: 552 CDYLFEIEPENTGNYVIMANLYSQAGRWKEADEVRERMNKVGLQKIPGSSWIETSEGLRS 611
Query: 644 FTVGDVSHPKTNAIYSVLAIFTG 666
F D I+ +L G
Sbjct: 612 FIATDTCTENVEEIHVILKGLLG 634
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 137/299 (45%), Gaps = 34/299 (11%)
Query: 272 LRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSM 331
LR AK++H+ ++ + +++S +V +Y K ++ +A + +N+FS ++M
Sbjct: 37 LRLPLQAKQLHARLILFSVTPENYLASKLVALYSKTNHLAFARYVFDQIPHKNTFSYNAM 96
Query: 332 IVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTD 391
++ YSL +A F SL N+V ++ C L LS F +
Sbjct: 97 LISYSLHNRHGDALDLFSSLASSNLVNNISI--------TC--LLKSLSSFTLSD----- 141
Query: 392 ALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQ 451
+ GKE+H ++LR G D + + L+ YSKC ++ + +F
Sbjct: 142 ----------------VKLGKEVHGFVLRTGFDADVFVENALITYYSKCYDLDLSRKVFD 185
Query: 452 NFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE-KGIKPDAVTFVAILSAFRHCGSVE 510
+RD+V +N MI+ Y+ G E L+ EM++ G +P+ VT V++L A +
Sbjct: 186 RMTKRDVVSWNSMISGYSQGGLYEDCKTLYREMVDFSGFRPNGVTVVSVLQACGQTQDLA 245
Query: 511 MGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLN 569
G + + D ++ + +I LY + L+ A E + +E+D V G+ ++
Sbjct: 246 FGME-VHKFIVDNQVEIDISVCNALIGLYAKCGSLDYARELFDEM-SEKDEVTYGAIIS 302
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+LK H AIK G +I +Y+K LR ++++FD+ +R++ W IIS
Sbjct: 375 SLKGGKEIHSYAIKIGYHRNIYVATAIIDMYAKSGYLRGAQRVFDQSKDRSLVIWTAIIS 434
Query: 65 ACIKSHDLKQARSLF----DSSPHKDLVTYNSML-----CGYIN 99
A D A LF D VT+ ++L CG ++
Sbjct: 435 AYAVHGDANLALGLFHEMLKQGIQPDPVTFTAVLAACAHCGMVD 478
>gi|225463207|ref|XP_002267970.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08490-like [Vitis vinifera]
Length = 868
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 178/608 (29%), Positives = 313/608 (51%), Gaps = 42/608 (6%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N+++S ++ +++A LF + +DLV++N+++ GY + G AL+LF E S E
Sbjct: 286 NSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYA-SNGEWLKALELFSEFISL-E 343
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV-SSLIDMYSKCRCYEE 178
I+ D T+ S L C + N+ + +H ++++ +V ++L+ Y+KC +
Sbjct: 344 TIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQA 403
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
A + F +IS+ D +SWN ++ + ++G
Sbjct: 404 ALQTFL-------MISRK--------------------------DLISWNAILDAFTESG 430
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI---SNPF 295
+ L M G+R + T + + + VK KE HS+ ++ GL+ + P
Sbjct: 431 CETHLVNLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPT 490
Query: 296 VSSGIVDVYCKCENMNYAESML-LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
+ +G++D Y KC NM YA ++ L RN + +SMI GY + ++A F++++E
Sbjct: 491 LGNGMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSET 550
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
++ W + Y + + L E + +G+ D + ++ +L ACA A++H ++
Sbjct: 551 DLTTWNLMVRVYAENDFPDQALSLFHE-LQGQGMKPDIVTIMSILPACAHMASVHMLRQC 609
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
H Y++R D +L +DMYSKCG++ A +F + ++DLV++ M+ +A HG
Sbjct: 610 HGYVIRACFN-DVRLNGAFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMG 668
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC 534
E+A+ +F MLE G+KPD V A+L A H G V+ G K FNS+ + P + YAC
Sbjct: 669 EEALRIFSYMLELGVKPDHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYAC 728
Query: 535 MIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNN 594
++DL R +++ A F+ +P E +A I G+ L CR + EL + L ++E +N
Sbjct: 729 VVDLLARGGRIKDAYTFVTRMPIEANANIWGTLLGACRTHHEVELGRVVADHLFKIESDN 788
Query: 595 KARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKT 654
YV ++N+YAA+ W + IR+ MR + + AGCSW+ V ++F GD SHP+
Sbjct: 789 IGNYVVMSNLYAADARWDGVMEIRRLMRTRELKKPAGCSWIEVGRRKNVFIAGDSSHPQR 848
Query: 655 NAIYSVLA 662
+ IY L+
Sbjct: 849 SIIYRTLS 856
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 133/517 (25%), Positives = 230/517 (44%), Gaps = 88/517 (17%)
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFT 127
KS L LF +D V +N +L G + +EA+ ++LF M +E + + T
Sbjct: 86 KSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNE-AKPNSVT 144
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
+ L +C +L G+ +H++++K+ ++ A ++LI MY+KC
Sbjct: 145 IAIVLPVCARLREDA-GKSVHSYVIKSGLESHTLAGNALISMYAKC-------------- 189
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
L+ +A A + + E D VSWN +I+G+ +N EE KLF
Sbjct: 190 ---GLVCSDAYAA---------------FNRIEFKDVVSWNAVIAGFSENKFTEEAFKLF 231
Query: 248 VRMGENGVRWNEHTFASALSACCGLR---NVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
M + ++ N T AS L C L + KE+H VL+
Sbjct: 232 HAMLKGPIQPNYATIASILPVCASLEENAGYRYGKEVHCHVLRR---------------- 275
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
++ V + I+S++ Y G ME+A F ++ +++V W A+ +
Sbjct: 276 --------------MELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIA 321
Query: 365 GYVKAQNCEAL--FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR-M 421
GY A N E L +L SEF++ E + D++ LV +L ACA L K IH YI+R
Sbjct: 322 GY--ASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHP 379
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFI---ERDLVLYNVMIACYAHHGHEEKAI 478
G++ D + + L+ Y+KC Y + Q F+ +DL+ +N ++ + G E +
Sbjct: 380 GLREDTSVGNALLSFYAKC---NYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLV 436
Query: 479 LLFEEMLEKGIKPDAVTFVAIL---SAFRHCGSVEMGEKY---FNSMTADYKISPETDHY 532
L ML +GI+PD++T + I+ +A V+ Y F + D P +
Sbjct: 437 NLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGD--AGPTLGN- 493
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLN 569
M+D Y + ++ A+ S+ + + V S ++
Sbjct: 494 -GMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMIS 529
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 116/452 (25%), Positives = 199/452 (44%), Gaps = 72/452 (15%)
Query: 106 DALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS 165
+AL LF+E + + + + L CV + + FG LH + +K + +
Sbjct: 20 EALSLFLERVRCSVGYKPNGQILAALLKSCVAISAIRFGSVLHGYALKLGHVSCQSLCKG 79
Query: 166 LIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAV 225
L+++Y+K + ++F GEM+ D V
Sbjct: 80 LLNLYAKSGALDYCNKLF----------------------GEMDQ-----------RDPV 106
Query: 226 SWNTLISGYV--QNGDAEEGLKLFVRMGE-NGVRWNEHTFASALSACCGLRNVKCAKEIH 282
WN ++SG Q+ +AE ++LF M N + N T A L C LR K +H
Sbjct: 107 IWNIVLSGLAGFQSHEAEV-MRLFRAMHMVNEAKPNSVTIAIVLPVCARLRE-DAGKSVH 164
Query: 283 SWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNME 342
S+V+K+GL S+ + ++ +Y KC G+ S
Sbjct: 165 SYVIKSGLESHTLAGNALISMYAKC-------------GLVCS----------------- 194
Query: 343 EARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGAC 402
+A F+ + K+VV W A+ +G+ + + E F L + A I IL
Sbjct: 195 DAYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCA 254
Query: 403 ALQ--AALHPGKEIHAYIL-RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLV 459
+L+ A GKE+H ++L RM + D +I++L+ Y + G M AE +F+N RDLV
Sbjct: 255 SLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLV 314
Query: 460 LYNVMIACYAHHGHEEKAILLFEEMLE-KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNS 518
+N +IA YA +G KA+ LF E + + IKPD+VT V++L A H ++++ +
Sbjct: 315 SWNAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGY 374
Query: 519 MTADYKISPETDHYACMIDLYGRANQLEKAIE 550
+ + +T ++ Y + N + A++
Sbjct: 375 IIRHPGLREDTSVGNALLSFYAKCNYTQAALQ 406
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 100/474 (21%), Positives = 196/474 (41%), Gaps = 75/474 (15%)
Query: 5 NLKEALICHVQAIK-AGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
NL+ A H I+ GL T N L+ Y+K N + + + F + +++ SWN I+
Sbjct: 364 NLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQTFLMISRKDLISWNAIL 423
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
A +S G E + L M E IR
Sbjct: 424 DAFTES--------------------------------GCETHLVNLLHWMLR--EGIRP 449
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVK---TSNDASGFAVSSLIDMYSKCRCYEEAC 180
D T+ + + + V ++ H++ ++ DA + ++D Y+KC + A
Sbjct: 450 DSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGMLDAYAKCGNMKYAV 509
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+F +E+ N+++ N+M++ + A F E D +WN ++ Y +N
Sbjct: 510 NIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSE-TDLTTWNLMVRVYAENDFP 568
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
++ L LF + G++ + T S L AC + +V ++ H +V++ ++ ++
Sbjct: 569 DQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIR-ACFNDVRLNGAF 627
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
+D+Y KC ++ A + L ++ ++M+ G+++ G EEA R F + E
Sbjct: 628 IDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLEL------ 681
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
GV D +I+ +L AC+ + G +I I +
Sbjct: 682 --------------------------GVKPDHVIITAVLFACSHAGLVDEGWKIFNSIEK 715
Query: 421 M-GVQMDKKLISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMI-ACYAHH 471
+ G Q + + +VD+ ++ G + A + + IE + ++ ++ AC HH
Sbjct: 716 VHGFQPTMEQYACVVDLLARGGRIKDAYTFVTRMPIEANANIWGTLLGACRTHH 769
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 147/339 (43%), Gaps = 49/339 (14%)
Query: 241 EEGLKLFVRMGE--NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
+E L LF+ G + N A+ L +C + ++ +H + LK G +S +
Sbjct: 19 DEALSLFLERVRCSVGYKPNGQILAALLKSCVAISAIRFGSVLHGYALKLGHVSCQSLCK 78
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
G++++Y K ++Y + F + +++ V+
Sbjct: 79 GLLNLYAKSGALDYCNKL-------------------------------FGEMDQRDPVI 107
Query: 359 WTALFSGYVKAQNCEA-LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
W + SG Q+ EA + L +++ + I+L CA + GK +H+Y
Sbjct: 108 WNIVLSGLAGFQSHEAEVMRLFRAMHMVNEAKPNSVTIAIVLPVCA-RLREDAGKSVHSY 166
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIE-RDLVLYNVMIACYAHHGHEEK 476
+++ G++ + L+ MY+KCG + N IE +D+V +N +IA ++ + E+
Sbjct: 167 VIKSGLESHTLAGNALISMYAKCGLVCSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTEE 226
Query: 477 AILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVE------MGEKYFNSMTADYKISPETD 530
A LF ML+ I+P+ T +IL C S+E G++ + ++ +
Sbjct: 227 AFKLFHAMLKGPIQPNYATIASILPV---CASLEENAGYRYGKEVHCHVLRRMELVEDVS 283
Query: 531 HYACMIDLYGRANQLEKAIEFMKSIPTEE----DAVILG 565
++ Y R Q+EKA +++ + + +A+I G
Sbjct: 284 VINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAG 322
>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 813
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 194/599 (32%), Positives = 300/599 (50%), Gaps = 68/599 (11%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
NT+++ K +L AR LF++ P D VT+N ++ GY+ G+ +A LF M SA
Sbjct: 252 NTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQ-NGFTDEAAPLFNAMISAG- 309
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
++ D T S L ++ ++ +++H+++V+ + S+LID+Y
Sbjct: 310 -VKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVY--------- 359
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
F+G G++EMA K F +Q L D +ISGYV +G
Sbjct: 360 ---FKG--------------------GDVEMARKIF-QQNILVDVAVCTAMISGYVLHGL 395
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
+ + F + + G+ N T AS L AC + +K KE+H +LK L + V S
Sbjct: 396 NIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSA 455
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
I D+Y KC G ++ A F +++++ V W
Sbjct: 456 ITDMYAKC-------------------------------GRLDLAYEFFRRMSDRDSVCW 484
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
++ S + + E DL + + G D++ L L A A AL+ GKE+H Y++
Sbjct: 485 NSMISSFSQNGKPEIAIDLFRQ-MGMSGAKFDSVSLSSALSAAANLPALYYGKEMHGYVI 543
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
R D + STL+DMYSKCGN+ A +F ++ V +N +IA Y +HG + +
Sbjct: 544 RNAFSSDTFVASTLIDMYSKCGNLALAWCVFNLMDGKNEVSWNSIIAAYGNHGCPRECLD 603
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
L+ EML GI PD VTF+ I+SA H G V+ G YF+ MT +Y I +HYACM+DLY
Sbjct: 604 LYHEMLRAGIHPDHVTFLVIISACGHAGLVDEGIHYFHCMTREYGIGARMEHYACMVDLY 663
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYV 599
GRA ++ +A + +KS+P DA + G+ L CRL+ N ELA A LL L+ N YV
Sbjct: 664 GRAGRVHEAFDTIKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLLELDPKNSGYYV 723
Query: 600 QLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
L+NV+A G WA + ++R M+ + G SW+ V H+F+ D +HP++ IY
Sbjct: 724 LLSNVHADAGEWASVLKVRSLMKEKGVQKIPGYSWIDVNGGTHMFSAADGNHPESVEIY 782
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 148/545 (27%), Positives = 253/545 (46%), Gaps = 102/545 (18%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
N+ ++ H A G + + LI +Y+ + +R++R++FDE+P R+ WN ++
Sbjct: 127 NVPLCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLR 186
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
+KS D FD +A+ F EM+++ + ++
Sbjct: 187 GYVKSGD-------FD-------------------------NAIGTFCEMRTS--YSMVN 212
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
T T L++C N G QLH ++ + + ++L+ MYSKC
Sbjct: 213 SVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKC----------- 261
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
G + A K F P+ D V+WN LI+GYVQNG +E
Sbjct: 262 ---------------------GNLLYARKLFNTMPQ-TDTVTWNGLIAGYVQNGFTDEAA 299
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
LF M GV+ + TFAS L + +++ KE+HS+++++ + + ++ S ++DVY
Sbjct: 300 PLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVY 359
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
K G++E AR+ F +V V TA+ S
Sbjct: 360 FK-------------------------------GGDVEMARKIFQQNILVDVAVCTAMIS 388
Query: 365 GYV-KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
GYV N +A+ ++ +EG+VT++L + +L ACA AAL PGKE+H +IL+ +
Sbjct: 389 GYVLHGLNIDAINTF--RWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKKRL 446
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
+ + S + DMY+KCG + A F+ +RD V +N MI+ ++ +G E AI LF +
Sbjct: 447 ENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFRQ 506
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRAN 543
M G K D+V+ + LSA + ++ G++ + + S +T + +ID+Y +
Sbjct: 507 MGMSGAKFDSVSLSSALSAAANLPALYYGKEMHGYVIRN-AFSSDTFVASTLIDMYSKCG 565
Query: 544 QLEKA 548
L A
Sbjct: 566 NLALA 570
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 134/593 (22%), Positives = 246/593 (41%), Gaps = 105/593 (17%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
+++A H Q I G+ +++++ +Y R++ LF E+ R WN +I
Sbjct: 27 VQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELRYALPWNWMI-- 84
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
R L+ ML G+ AL + +M ++ + D+
Sbjct: 85 ----------RGLY-------------ML-------GWFDFALLFYFKMLGSN--VSPDK 112
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
+T + C L NV +H FA S+LI +Y+ +A RVF+
Sbjct: 113 YTFPYVIKACGGLNNVPLCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFD- 171
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
E+ L+ D + WN ++ GYV++GD + +
Sbjct: 172 -----------------------ELPLR---------DTILWNVMLRGYVKSGDFDNAIG 199
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
F M + N T+ LS C N ++H V+ +G +P V++ +V +Y
Sbjct: 200 TFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYS 259
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
KC N+ Y AR+ F+++ + + V W L +G
Sbjct: 260 KCGNLLY-------------------------------ARKLFNTMPQTDTVTWNGLIAG 288
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
YV+ + L + ++ GV D++ L + +L KE+H+YI+R V
Sbjct: 289 YVQNGFTDEAAPLFNAMISA-GVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPF 347
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
D L S L+D+Y K G++ A IFQ I D+ + MI+ Y HG AI F ++
Sbjct: 348 DVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLI 407
Query: 486 EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQL 545
++G+ +++T ++L A +++ G K + ++ + + + D+Y + +L
Sbjct: 408 QEGMVTNSLTMASVLPACAAVAALKPG-KELHCHILKKRLENIVNVGSAITDMYAKCGRL 466
Query: 546 EKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARY 598
+ A EF + + ++ D+V S ++ N E+A + L R G + A++
Sbjct: 467 DLAYEFFRRM-SDRDSVCWNSMISSFSQNGKPEIAID----LFRQMGMSGAKF 514
>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 189/606 (31%), Positives = 296/606 (48%), Gaps = 72/606 (11%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYI-NAEGYEADALKLFIEMQSAD 118
N +I+ +K D+ AR LFD P +D +++N+M+ GY N E E L+LF M+
Sbjct: 174 NALITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFENDECLEG--LELFFRMRELS 231
Query: 119 EHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEE 178
I D T+TS ++ C L + G QLH+++V+T+ D + +SLI MY ++E
Sbjct: 232 --IDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKE 289
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
A VF G E D VSW T+ISG V N
Sbjct: 290 AESVFSGM---------------------------------ECRDVVSWTTIISGCVDNL 316
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
++ L+ + M G +E T AS LSAC L + ++H + G I V++
Sbjct: 317 LPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVAN 376
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
++D+Y KC+ + E+A F + +K+V+
Sbjct: 377 SLIDMYSKCKRI-------------------------------EKALEIFHQIPDKDVIS 405
Query: 359 WTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
WT++ +G C + + K +++ L+ L ACA AL GKEIHA+
Sbjct: 406 WTSVINGLRINNRCFEALIFFRKMILKSK--PNSVTLISALSACARVGALMCGKEIHAHA 463
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
L+ G+ D L + ++D+Y +CG M A F N E+D+ +N+++ YA G +
Sbjct: 464 LKAGMGFDGFLPNAILDLYVRCGRMRTALNQF-NLNEKDVGAWNILLTGYAQKGKGAMVM 522
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
LF+ M+E I PD VTF+++L A G V G +YF M +Y I+P HYAC++DL
Sbjct: 523 ELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLEYFQRMKVNYHITPNLKHYACVVDL 582
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARY 598
GRA +L +A EF++ +P + D I G+ LN CR++R+ L A + + + + + Y
Sbjct: 583 LGRAGKLNEAHEFIERMPIKPDPAIWGALLNACRIHRHVLLGELAAQHIFKQDAESIGYY 642
Query: 599 VQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
+ L N+YA G W E+ ++R+ M+ GCSWV V+ ++H F GD HP+ I
Sbjct: 643 ILLCNLYADSGKWDEVAKVRRTMKEEGLIVDPGCSWVEVKGKVHAFLSGDNFHPQMQEIN 702
Query: 659 SVLAIF 664
VL F
Sbjct: 703 VVLEGF 708
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 194/421 (46%), Gaps = 53/421 (12%)
Query: 165 SLIDMYSKCRCYEEACRVFEGCTEE-VNLIS---KNAMVAACCREGEMEMALKTFWRQPE 220
+LI + R Y E V++ V L+S NA+++ R G++ A F R E
Sbjct: 38 ALIRLCENKRGYSEGEYVWKAVLSSLVTLLSVRLGNALLSMFVRFGDVGNAWNVFGRMGE 97
Query: 221 LNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKE 280
D SWN L+ GY + G +E L L+ R+ G+R + +TF S L +C G ++ +E
Sbjct: 98 -RDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRPDVYTFPSVLRSCAGAMDLVRGRE 156
Query: 281 IHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGN 340
+H+ V++ + V + ++ +Y KC G+
Sbjct: 157 VHAHVVRFDFDMDVDVVNALITMYVKC-------------------------------GD 185
Query: 341 MEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKE-GVVTDALILVILL 399
+ AR FD + ++ + W A+ SGY + C +L F +E + D + + ++
Sbjct: 186 VVSARMLFDKMPTRDRISWNAMISGYFENDECLEGLELF--FRMRELSIDPDLMTMTSVI 243
Query: 400 GACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLV 459
AC L G ++H+Y++R + + ++L+ MY G+ AE +F RD+V
Sbjct: 244 SACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVV 303
Query: 460 LYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSM 519
+ +I+ + +KA+ ++ M G PD VT ++LSA G ++MG K
Sbjct: 304 SWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKL---- 359
Query: 520 TADYKISPETDHYA------CMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRL 573
++++ T H +ID+Y + ++EKA+E IP ++D + S +N R+
Sbjct: 360 ---HELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIP-DKDVISWTSVINGLRI 415
Query: 574 N 574
N
Sbjct: 416 N 416
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 100/256 (39%), Gaps = 70/256 (27%)
Query: 329 SSMIVGYSLQGNMEEARRHFDSLTEKNV------------------------VVWTALFS 364
+S ++ L GN+E+A +H S+ E + VW A+ S
Sbjct: 2 NSRLLQLCLSGNLEQALKHLASMQEVKIPVEEDCFVALIRLCENKRGYSEGEYVWKAVLS 61
Query: 365 GYVKAQNCEALFDLLSEFV------------------------------TKEGVVTDALI 394
V + LLS FV TK G +AL
Sbjct: 62 SLVTLLSVRLGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALC 121
Query: 395 L----------------VILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYS 438
L +L +CA L G+E+HA+++R MD +++ L+ MY
Sbjct: 122 LYHRILWAGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYV 181
Query: 439 KCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVA 498
KCG++ A ++F RD + +N MI+ Y + + + LF M E I PD +T +
Sbjct: 182 KCGDVVSARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTS 241
Query: 499 ILSAFRHCGSVEMGEK 514
++SA G +G +
Sbjct: 242 VISACELLGDERLGTQ 257
>gi|297736926|emb|CBI26127.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 197/616 (31%), Positives = 306/616 (49%), Gaps = 28/616 (4%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
++F + I A K + AR LFD PHKD V +N+ML Y + G AL LF M
Sbjct: 4 HLFQTTSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASY-SQLGLHQQALCLFHHM 62
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
+ A+ R D FT T+TL+ C L + G ++HA +V + +S +SLIDMY KC
Sbjct: 63 RIANS--RPDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCL 120
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
A RVFE + +N +S +++ A G ++A F P+ + ++WN +ISGY
Sbjct: 121 SATSARRVFEEMSI-MNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVE-IAWNIMISGY 178
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
Q GD E L LF +M E+ ++ ++ TF++ ++A C L+ +H +++K
Sbjct: 179 GQCGDVELCLGLFKKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIK------- 231
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
SG DV M ES+ G+ S ++MI + G+ EA F EK
Sbjct: 232 ---SGWDDV------MKVFESI----GILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEK 278
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
NVV WT++ +GY + + E + + + D +L AC+ A L GK I
Sbjct: 279 NVVSWTSMITGYARNGHGEQALSFFVKMMENH-IQPDDFTFGAVLHACSSLATLGHGKMI 337
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
H I+ G + + LV+MY+KCG++ + F+ + +DLV +N M+ HGH
Sbjct: 338 HGSIIHYGFHAYVDVGNGLVNMYAKCGDIQGSNTAFKEILGKDLVSWNAMLFGLGMHGHA 397
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC 534
+A+ L+EEM+ G+KPD VTF+ +L H G +E G+ F SM + Y +S ET+H C
Sbjct: 398 TQALELYEEMVASGMKPDKVTFIGLLMTCSHSGLIEKGQALFESMVSVYGLSQETEHVVC 457
Query: 535 MIDLYGRANQLEKAIEFMK--SIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
M+DL GR L +A E + S + + + L C + + E L E
Sbjct: 458 MVDLLGRGGYLAQARELVDEYSRTGRAETSLPEALLGACFAHSEVRMGANLGEYLKVFEP 517
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
+ YV L+N+Y G W E +RK M + GCSW+ V +++ +F G+ SHP
Sbjct: 518 QKEMSYVLLSNLYCVSGQWKEAEMVRKTMTDHGVKKMPGCSWIEVRNKVTVFVAGNHSHP 577
Query: 653 KTNAIYSVLAIFTGEL 668
+ +L E+
Sbjct: 578 YMEELCKILNFLKFEM 593
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/470 (23%), Positives = 208/470 (44%), Gaps = 62/470 (13%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L+ + H Q + +G + N LI +Y K +R++F+EM N SW +++ A
Sbjct: 87 LRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARRVFEEMSIMNEVSWCSLLFA 146
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
S AR +FD P K + +N M+ GY E L LF +M+ ++ ++ D+
Sbjct: 147 YTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGDVEL-CLGLFKKMR--EDSLQPDQ 203
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
+T ++ +N +L +G +H F++K+ +++ +VFE
Sbjct: 204 WTFSALVNALCELQEPSYGYMMHGFIIKSG--------------------WDDVMKVFES 243
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
+ +S NAM+ A + G+ A F PE N VSW ++I+GY +NG E+ L
Sbjct: 244 IG-ILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKN-VVSWTSMITGYARNGHGEQALS 301
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
FV+M EN ++ ++ TF + L AC L + K IH ++ G + V +G+V++Y
Sbjct: 302 FFVKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVDVGNGLVNMYA 361
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
KC G+++ + F + K++V W A+ G
Sbjct: 362 KC-------------------------------GDIQGSNTAFKEILGKDLVSWNAMLFG 390
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM-GVQ 424
+ +L E V G+ D + + LL C+ + G+ + ++ + G+
Sbjct: 391 LGMHGHATQALELYEEMVAS-GMKPDKVTFIGLLMTCSHSGLIEKGQALFESMVSVYGLS 449
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIER---DLVLYNVMI-ACYAH 470
+ + + +VD+ + G + A + + + L ++ AC+AH
Sbjct: 450 QETEHVVCMVDLLGRGGYLAQARELVDEYSRTGRAETSLPEALLGACFAH 499
>gi|356562443|ref|XP_003549481.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 836
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 210/750 (28%), Positives = 335/750 (44%), Gaps = 142/750 (18%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H Q I +GL + N L+H+YS ++ ++ ++F E N+F+WNT++ A S +
Sbjct: 27 HAQLILSGLDASLFLLNNLLHMYSNCGMVDDAFRVFREANHANIFTWNTMLHAFFDSGRM 86
Query: 73 KQARSLFDSSPH--KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH--IRMDEFTV 128
++A +LFD PH +D V++ +M+ GY G A ++K F+ M H D F+
Sbjct: 87 REAENLFDEMPHIVRDSVSWTTMISGYCQ-NGLPAHSIKTFMSMLRDSNHDIQNCDPFSY 145
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE 188
T T+ C L + F QLHA ++K A +SL+DMY KC A VF E
Sbjct: 146 TCTMKACGCLASTRFALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETVFLN-IE 204
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
+L N+M+ + AL F R PE D VSWNTLIS + Q G L FV
Sbjct: 205 SPSLFCWNSMIYGYSQLYGPYEALHVFTRMPE-RDHVSWNTLISVFSQYGHGIRCLSTFV 263
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
M G + N T+ S LSAC + ++K +H+ +L+ + F+ SG++D+Y KC
Sbjct: 264 EMCNLGFKPNFMTYGSVLSACASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKC- 322
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
G + ARR F+SL E+N V WT L SG +
Sbjct: 323 ------------------------------GCLALARRVFNSLGEQNQVSWTCLISGVAQ 352
Query: 369 ---AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
+ ALF+ + + VV D L +LG C+ Q G+ +H Y ++ G+
Sbjct: 353 FGLRDDALALFNQMRQ----ASVVLDEFTLATILGVCSGQNYAATGELLHGYAIKSGMDS 408
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQN-------------------------------FI 454
+ + ++ MY++CG+ A + F++
Sbjct: 409 FVPVGNAIITMYARCGDTEKASLAFRSMPLRDTISWTAMITAFSQNGDIDRARQCFDMMP 468
Query: 455 ERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFV----------------- 497
ER+++ +N M++ Y HG E+ + L+ M K +KPD VTF
Sbjct: 469 ERNVITWNSMLSTYIQHGFSEEGMKLYVLMRSKAVKPDWVTFATSIRACADLATIKLGTQ 528
Query: 498 ------------------AILSAFRHCGSVEMGEKYFNSMTADYKIS------------- 526
+I++ + CG ++ K F+S+ IS
Sbjct: 529 VVSHVTKFGLSSDVSVANSIVTMYSRCGQIKEARKVFDSIHVKNLISWNAMMAAFAQNGL 588
Query: 527 -----------------PETDHY-ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFL 568
P+ Y A + DL GRA L++A + +P + +A + G+ L
Sbjct: 589 GNKAIETYEDMLRTECKPDHISYVAVLSDLLGRAGLLDQAKNLIDGMPFKPNATVWGALL 648
Query: 569 NVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNR 628
CR++ ++ LA A +KL+ L + YV LAN+YA G + +RK M+ +
Sbjct: 649 GACRIHHDSILAETAAKKLMELNVEDSGGYVLLANIYAESGELENVADMRKLMKVKGIRK 708
Query: 629 FAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
GCSW+ V++ +H+FTV + SHP+ N +Y
Sbjct: 709 SPGCSWIEVDNRVHVFTVDETSHPQINEVY 738
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/428 (29%), Positives = 199/428 (46%), Gaps = 22/428 (5%)
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
R+LHA ++ + DAS F +++L+ MYS C ++A RVF N+ + N M+ A
Sbjct: 23 ARKLHAQLILSGLDASLFLLNNLLHMYSNCGMVDDAFRVFRE-ANHANIFTWNTMLHAFF 81
Query: 204 REGEMEMALKTFWRQPEL-NDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG----VRWN 258
G M A F P + D+VSW T+ISGY QNG +K F+ M + +
Sbjct: 82 DSGRMREAENLFDEMPHIVRDSVSWTTMISGYCQNGLPAHSIKTFMSMLRDSNHDIQNCD 141
Query: 259 EHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLL 318
++ + AC L + + A ++H+ V+K L + + + +VD+Y KC + AE++ L
Sbjct: 142 PFSYTCTMKACGCLASTRFALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETVFL 201
Query: 319 LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL---FSGYVKAQNCEAL 375
+ F +SMI GYS EA F + E++ V W L FS Y C +
Sbjct: 202 NIESPSLFCWNSMIYGYSQLYGPYEALHVFTRMPERDHVSWNTLISVFSQYGHGIRCLST 261
Query: 376 FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVD 435
F + K +T + L ACA + L G +HA ILRM +D L S L+D
Sbjct: 262 FVEMCNLGFKPNFMTYGSV----LSACASISDLKWGAHLHARILRMEHSLDAFLGSGLID 317
Query: 436 MYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVT 495
MY+KCG + A +F + E++ V + +I+ A G + A+ LF +M + + D T
Sbjct: 318 MYAKCGCLALARRVFNSLGEQNQVSWTCLISGVAQFGLRDDALALFNQMRQASVVLDEFT 377
Query: 496 FVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA----CMIDLYGRANQLEKAIEF 551
IL GE + Y I D + +I +Y R EKA
Sbjct: 378 LATILGVCSGQNYAATGE-----LLHGYAIKSGMDSFVPVGNAIITMYARCGDTEKASLA 432
Query: 552 MKSIPTEE 559
+S+P +
Sbjct: 433 FRSMPLRD 440
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 165/539 (30%), Positives = 279/539 (51%), Gaps = 34/539 (6%)
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
+D F+ S L K+ G ++H K F + LI MY+ CR +A +
Sbjct: 119 LDRFSFPSLLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLL 178
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
F+ DAV+WN +I GY QNG ++
Sbjct: 179 FDKMCHP---------------------------------DAVAWNMIIDGYCQNGHYDD 205
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
L+LF M + ++ + + LSAC N+ + IH +V NG + + + +++
Sbjct: 206 ALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALIN 265
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
+Y C M+ A + ++ ++M+ GY+ G +++AR FD + E+++V W+A+
Sbjct: 266 MYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAM 325
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
SGY ++ + L E + K V D + ++ ++ AC+ AL IH Y+ R G
Sbjct: 326 ISGYAESDQPQEALKLFDEMLQKRSV-PDQITMLSVISACSHVGALAQANWIHTYVDRSG 384
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
+ + L+DMY+KCGN+ A +F+N ++++ ++ MI +A HG+ + AI LF
Sbjct: 385 FGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFR 444
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRA 542
M E I+P+ VTF+ +L A H G VE GEK F+SM ++ ISP +HY CM+DLY RA
Sbjct: 445 RMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRA 504
Query: 543 NQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLA 602
N L KAIE ++++P + +I GS ++ C+++ AEL A ++LL LE ++ V L+
Sbjct: 505 NFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELEPDHDGALVVLS 564
Query: 603 NVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
N+YA E W ++G IRK M ++ S + + +++H+F + D H +++ IY L
Sbjct: 565 NIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFMMADRYHKQSDEIYEKL 623
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 109/491 (22%), Positives = 218/491 (44%), Gaps = 72/491 (14%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A K G LI +Y+ + ++R LFD+M + +WN II
Sbjct: 144 HGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIID-------- 195
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
GY G+ DAL+LF +M+S+D ++ D + + L
Sbjct: 196 -----------------------GYCQ-NGHYDDALRLFEDMRSSD--MKPDSVILCTVL 229
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C N+ +GR +H F+ ++LI+MY+ C + A ++++G + + +L
Sbjct: 230 SACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSK-HL 288
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
I AM++ + G ++ A F + E D V W+ +ISGY ++ +E LKLF M +
Sbjct: 289 IVSTAMLSGYAKLGMVKDARFIFDQMIE-RDLVCWSAMISGYAESDQPQEALKLFDEMLQ 347
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
++ T S +SAC + + A IH++V ++G V++ ++D+Y KC
Sbjct: 348 KRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKC----- 402
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
GN+ +AR F+++ KNV+ W+++ + + N
Sbjct: 403 --------------------------GNLVKAREVFENMPRKNVISWSSMINAFAMHGNA 436
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL-RMGVQMDKKLIS 431
++ L + + + + + + +L AC + G+++ + ++ G+ ++
Sbjct: 437 DSAIKLFRR-MKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYG 495
Query: 432 TLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+VD+Y + + A E+I +++++ +++ HG E + +LE ++
Sbjct: 496 CMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLE--LE 553
Query: 491 PDAVTFVAILS 501
PD + +LS
Sbjct: 554 PDHDGALVVLS 564
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 80/207 (38%), Gaps = 35/207 (16%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L +A H ++G N LI +Y+K L ++R++F+ MP +NV SW+++I+A
Sbjct: 370 LAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINA 429
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
G A+KLF M+ + I +
Sbjct: 430 --------------------------------FAMHGNADSAIKLFRRMKEVN--IEPNG 455
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSN-DASGFAVSSLIDMYSKCRCYEEACRVFE 184
T L C V G +L + M+ + ++D+Y + +A + E
Sbjct: 456 VTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIE 515
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMA 211
N+I ++++AC GE E+
Sbjct: 516 TMPFAPNVIIWGSLMSACQVHGEAELG 542
>gi|357502061|ref|XP_003621319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496334|gb|AES77537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 605
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 187/614 (30%), Positives = 308/614 (50%), Gaps = 77/614 (12%)
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLF-IEMQSADEH 120
+I++ +++L A ++F+ P ++ YN ++ Y + G E+++L F + ++ +
Sbjct: 60 LIASYSLTNNLSSAVNVFNQVPDPNVHLYNYLIRAY-SLSGNESNSLCAFGVLLKMHVDG 118
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
+ D FT + F++K N +S + SL+ M + E
Sbjct: 119 VLADNFT--------------------YPFLLKGCNGSSSWL--SLVKM---VHAHVEKL 153
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+ ++ N+++ CR G++EMA+K F E D VSWN+++ G V+NGD
Sbjct: 154 GFYW------DIFVPNSLIDCYCRCGDVEMAMKVFSGMEE-RDVVSWNSMVGGLVKNGDL 206
Query: 241 EEGLKLFVRMGE-NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
+ LK+F M E + V WN
Sbjct: 207 DGALKVFDEMPERDRVSWNT---------------------------------------- 226
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
++D + K M+ A + R+ S S+M+ GYS G+M+ AR FD KN+V+W
Sbjct: 227 MLDGFTKAGEMDKAFKLFERMAERDIVSWSTMVCGYSKNGDMDMARMLFDRCPVKNLVLW 286
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
T + SGY + + +L E + K G+ D + +L ACA L GK++H L
Sbjct: 287 TTIISGYAEKGQVKEAMNLCDE-MEKSGLRLDDGFFISILAACAESGMLGLGKKMHDSFL 345
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKAI 478
R + K++++ +DMY+KCG + A +F E+DLV +N MI + HGH EK+I
Sbjct: 346 RSRFRCSTKVLNSFIDMYAKCGCVDDAFRVFNGMKTEKDLVSWNSMIHGFGIHGHGEKSI 405
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
LF M+ +G KPD TF+ +L A H G V G YF SM Y I P+ +HY CM+DL
Sbjct: 406 ELFNTMVREGFKPDRYTFIGLLCACTHAGLVNEGRGYFYSMQRVYGIVPQIEHYGCMVDL 465
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARY 598
GR L++A ++S+P E +A+ILG+ L CR++ + +LA + L +L ++ +
Sbjct: 466 LGRGGHLKEAFWLVRSMPFEPNAIILGTLLGACRMHNDVKLATSVSKYLFKLVPSDPGNF 525
Query: 599 VQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
L+N+YA G+W + ++RKQM G + +G S + VE E+H FTV D SHPK+ IY
Sbjct: 526 SLLSNIYAQSGDWINVAKVRKQMNDEGGQKPSGVSSIEVEEEVHEFTVRDWSHPKSGDIY 585
Query: 659 SVLAIFTGELYEIA 672
+++ +L ++
Sbjct: 586 NMIDRLVHDLRQVG 599
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 124/244 (50%), Gaps = 35/244 (14%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
++ N ++ ++K + ++ KLF+ M ER++ SW+T++ K+ D+ AR LFD P K
Sbjct: 222 VSWNTMLDGFTKAGEMDKAFKLFERMAERDIVSWSTMVCGYSKNGDMDMARMLFDRCPVK 281
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR 145
+LV + +++ GY +G +A+ L EM+ + +R+D+ S L C + +G G+
Sbjct: 282 NLVLWTTIISGYAE-KGQVKEAMNLCDEMEKSG--LRLDDGFFISILAACAESGMLGLGK 338
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
++H +++ S ++S IDMY+KC C ++A RVF G E +L+S
Sbjct: 339 KMHDSFLRSRFRCSTKVLNSFIDMYAKCGCVDDAFRVFNGMKTEKDLVS----------- 387
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASA 265
WN++I G+ +G E+ ++LF M G + + +TF
Sbjct: 388 ---------------------WNSMIHGFGIHGHGEKSIELFNTMVREGFKPDRYTFIGL 426
Query: 266 LSAC 269
L AC
Sbjct: 427 LCAC 430
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 138/304 (45%), Gaps = 24/304 (7%)
Query: 300 IVDVYCKCENMNYAESM--LLLKGV--RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKN 355
I D++ KC N N+ + + L+K ++ + +I YSL N+ A F+ + + N
Sbjct: 26 ITDLH-KCTNPNHIKQIHAQLIKCHLHQDPYIAPKLIASYSLTNNLSSAVNVFNQVPDPN 84
Query: 356 VVVWTALFSGYVKAQNCE----ALFDLLSEFVTKEGVVTDALILVILLGACALQAA-LHP 410
V ++ L Y + N A LL V +GV+ D LL C ++ L
Sbjct: 85 VHLYNYLIRAYSLSGNESNSLCAFGVLLKMHV--DGVLADNFTYPFLLKGCNGSSSWLSL 142
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
K +HA++ ++G D + ++L+D Y +CG++ A +F ERD+V +N M+
Sbjct: 143 VKMVHAHVEKLGFYWDIFVPNSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGGLVK 202
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD 530
+G + A+ +F+EM E+ D V++ +L F G ++ K F M +S
Sbjct: 203 NGDLDGALKVFDEMPER----DRVSWNTMLDGFTKAGEMDKAFKLFERMAERDIVS---- 254
Query: 531 HYACMIDLYGRANQLEKAIEFMKSIPTEEDAV---ILGSFLNVCRLNRNAELAGEAEEKL 587
++ M+ Y + ++ A P + + I+ + ++ L E E+
Sbjct: 255 -WSTMVCGYSKNGDMDMARMLFDRCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSG 313
Query: 588 LRLE 591
LRL+
Sbjct: 314 LRLD 317
>gi|357441891|ref|XP_003591223.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480271|gb|AES61474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 606
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 179/605 (29%), Positives = 307/605 (50%), Gaps = 71/605 (11%)
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I + ++A +LFD PH+D++ + SM+ GY + + + A +F M + +
Sbjct: 47 LIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCN-HHSRAWNVFTNMLR--DGV 103
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV-SSLIDMYSKC-RCYEEA 179
+ + FTV++ L C L + G+ +H +K S V ++L+DMY+ C + A
Sbjct: 104 KPNAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSMDNA 163
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
VFE ++ +KNA VSW TLI+GY D
Sbjct: 164 RLVFE------DIGTKNA---------------------------VSWTTLITGYTHRRD 190
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
A GL++F +M + +F+ A+SAC + + K++H+ V+ +G SN V +
Sbjct: 191 AFGGLRVFRQMFMEEGELSPFSFSIAVSACASIGSSNLGKQVHAAVINHGFESNLPVMNA 250
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
I+D+YC+C + EA++ F +T+K+ + W
Sbjct: 251 ILDMYCRCRCAS-------------------------------EAKQLFGEMTQKDTITW 279
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
L +G+ + E+L + S+ V+ EG + ++ ACA A L+ G+++H I+
Sbjct: 280 NTLIAGFETLDSYESLC-IFSQMVS-EGFSPNCFTFTSVIAACANLAILYCGQQLHGGII 337
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
G+ + +L + L+DMY+KCGN+ + IF +LV + M+ Y HGH ++A+
Sbjct: 338 HRGLDNNLELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGKEAVD 397
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
LF EM+ GIKPD + F+A+LSA H G V+ G +YF MT+ Y ++P+ D YAC++DL
Sbjct: 398 LFNEMVGSGIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYNVAPDRDIYACVVDLL 457
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYV 599
RA ++++A E ++++P + D I + L C+ + + A K+L ++ N YV
Sbjct: 458 SRAGRVKEAYELIENMPFKPDESIWVALLGACKKYKQPSIQKLAALKVLEMKPNKAGTYV 517
Query: 600 QLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYS 659
L+N AAEGNWA+ +RK MR K + G SW+ +++++ F VGD+ +
Sbjct: 518 LLSNFSAAEGNWADFASLRKLMRSTKSKKEVGRSWIELKNQVCSFIVGDIFDSSNKEVCE 577
Query: 660 VLAIF 664
VL +
Sbjct: 578 VLELL 582
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 120/287 (41%), Gaps = 73/287 (25%)
Query: 18 KAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISAC--IKSHDL--- 72
K ++ TT+ T H LR R++F E E + FS++ +SAC I S +L
Sbjct: 173 KNAVSWTTLITG-YTHRRDAFGGLRVFRQMFMEEGELSPFSFSIAVSACASIGSSNLGKQ 231
Query: 73 ------------------------------KQARSLFDSSPHKDLVTYNSMLCGYINAEG 102
+A+ LF KD +T+N+++ G+ +
Sbjct: 232 VHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWNTLIAGFETLDS 291
Query: 103 YEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFA 162
YE+ L +F +M S E + FT TS + C L + G+QLH ++ D +
Sbjct: 292 YES--LCIFSQMVS--EGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIHRGLDNNLEL 347
Query: 163 VSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN 222
++LIDMY+KC ++ ++F G NL
Sbjct: 348 SNALIDMYAKCGNVADSHKIFSG-MRHTNL------------------------------ 376
Query: 223 DAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
VSW +++ GY +G +E + LF M +G++ ++ F + LSAC
Sbjct: 377 --VSWTSMMIGYGAHGHGKEAVDLFNEMVGSGIKPDKIVFMAVLSAC 421
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%)
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
L + L+ Y G+ A +F RD++ + MI Y H +A +F ML G
Sbjct: 43 LTTDLIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDG 102
Query: 489 IKPDAVTFVAILSA 502
+KP+A T A+L A
Sbjct: 103 VKPNAFTVSAVLKA 116
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 191/655 (29%), Positives = 326/655 (49%), Gaps = 75/655 (11%)
Query: 22 TLTTITTNQLIHIYSKHNLLRE-SRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFD 80
+ TT+ Q+ ++ NL RE L E N+ N ++ K + A +F
Sbjct: 266 SYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNI-QCNALLVMYTKCGRVDSALRVFR 324
Query: 81 SSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLN 140
KD +++NSML Y+ G A+A++ EM + D + S + L
Sbjct: 325 EIDEKDYISWNSMLSCYVQ-NGLYAEAIEFISEMLRGG--FQPDHACIVSLSSAVGHLGW 381
Query: 141 VGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVA 200
+ G+++HA+ +K D+ ++L+DMY KCR E + VF+
Sbjct: 382 LLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFD---------------- 425
Query: 201 ACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEH 260
+ + D +SW T+I+ Y Q+ E L++F + G++ +
Sbjct: 426 -----------------RMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPM 468
Query: 261 TFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLK 320
S L AC GL + AK++H + ++NGL+ + V + I+D+Y +C
Sbjct: 469 MIGSILEACSGLETILLAKQLHCYAIRNGLL-DLVVKNRIIDIYGEC------------- 514
Query: 321 GVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLS 380
G + + + F+++ +K++V WT++ + Y + L +
Sbjct: 515 ------------------GEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFA 556
Query: 381 EFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC 440
E + + V D++ LV +LGA ++L GKE+H +++R M++ ++S+LVDMYS C
Sbjct: 557 EMQSTD-VQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGC 615
Query: 441 GNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAIL 500
G+++ A +F +D+VL+ MI HGH ++AI LF+ ML+ G+ PD V+F+A+L
Sbjct: 616 GSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALL 675
Query: 501 SAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEED 560
A H V G+ Y + M + Y++ P +HYAC++DL GR+ Q E+A EF+KS+P +
Sbjct: 676 YACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEFIKSMPLKPK 735
Query: 561 AVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQ 620
+V+ S L CR+++N ELA A +LL LE +N YV ++NV+A G W +R +
Sbjct: 736 SVVWCSLLGACRVHKNHELAVVAANRLLELEPDNPGNYVLVSNVFAEMGKWNNAKEVRAR 795
Query: 621 M--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIAG 673
+ RG++ + CSW+ + + +H FT D SH I LA T L + G
Sbjct: 796 ISERGLRKD--PACSWIEIGNNVHTFTTRDNSHRDAERINLKLAEITERLRKEGG 848
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 140/630 (22%), Positives = 260/630 (41%), Gaps = 136/630 (21%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLV 88
+L+ +Y K + ++R LFD M R VFSWN +I A + S
Sbjct: 99 TKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSS------------------- 139
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQ-SADEHIRMDEFTVTSTLNLCVKLLNVGFGRQL 147
G +AL ++ M+ SA + D T+ S L + G ++
Sbjct: 140 -------------GSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGCEV 186
Query: 148 HAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGE 207
H VK D S F ++LI MY+KC + A RVFE + ++ S N+M++ C + G
Sbjct: 187 HGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGM 246
Query: 208 MEMALKTFWRQP----------------------------ELNDA---------VSWNTL 230
AL F EL+ A + N L
Sbjct: 247 FLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQCNAL 306
Query: 231 ISGYVQNGDAEEGLKLFVRMGENG-VRWN-----------------------------EH 260
+ Y + G + L++F + E + WN +H
Sbjct: 307 LVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDH 366
Query: 261 TFASALSACCG-LRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLL 319
+LS+ G L + KE+H++ +K L S+ V + ++D+Y KC + Y+ +
Sbjct: 367 ACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHV--- 423
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLL 379
FD + K+ + WT + + Y ++ ++
Sbjct: 424 ----------------------------FDRMRIKDHISWTTIITCYAQSSRHIEALEIF 455
Query: 380 SEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
E KEG+ D +++ +L AC+ + K++H Y +R G+ +D + + ++D+Y +
Sbjct: 456 RE-AQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGL-LDLVVKNRIIDIYGE 513
Query: 440 CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
CG + ++ +F+ ++D+V + MI CYA+ G +A++LF EM ++PD+V V+I
Sbjct: 514 CGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSI 573
Query: 500 LSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE 559
L A S+ G K + E + ++D+Y L A++ ++ +
Sbjct: 574 LGAIGGLSSLAKG-KEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKC-K 631
Query: 560 DAVILGSFLNVCRLNRNAELAGEAEEKLLR 589
D V+ + +N ++ + + A + +++L+
Sbjct: 632 DMVLWTAMINATGMHGHGKQAIDLFKRMLQ 661
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 122/528 (23%), Positives = 210/528 (39%), Gaps = 118/528 (22%)
Query: 4 LNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
LN KE H AIK L T N L+ +Y K + S +FD M ++ SW TII
Sbjct: 383 LNGKEV---HAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTII 439
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
+ + SS H +AL++F E Q E I++
Sbjct: 440 TCYAQ------------SSRH--------------------IEALEIFREAQK--EGIKV 465
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS-LIDMYSKCRCYEEACRV 182
D + S L C L + +QLH + ++ N V + +ID+Y +C
Sbjct: 466 DPMMIGSILEACSGLETILLAKQLHCYAIR--NGLLDLVVKNRIIDIYGEC--------- 514
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
GE+ +LK F E D V+W ++I+ Y +G E
Sbjct: 515 -----------------------GEVYHSLKMF-ETVEQKDIVTWTSMINCYANSGLLNE 550
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
L LF M V+ + S L A GL ++ KE+H ++++ + S +VD
Sbjct: 551 ALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVD 610
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
+Y C G++ A + F+++ K++V+WTA+
Sbjct: 611 MYSGC-------------------------------GSLSGALKVFNAVKCKDMVLWTAM 639
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK-EIHAYILRM 421
+ + + DL + + GV D + + LL AC+ ++ GK + +
Sbjct: 640 INATGMHGHGKQAIDLFKRML-QTGVTPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTY 698
Query: 422 GVQMDKKLISTLVDMYSKCGNM--TYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
++ ++ + +VD+ + G Y I + +V +++ AC H H E A++
Sbjct: 699 RLEPWQEHYACVVDLLGRSGQTEEAYEFIKSMPLKPKSVVWCSLLGACRVHKNH-ELAVV 757
Query: 480 LFEEMLEKGIKPD-AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKIS 526
+LE ++PD +V + + F EMG K+ N+ +IS
Sbjct: 758 AANRLLE--LEPDNPGNYVLVSNVF-----AEMG-KWNNAKEVRARIS 797
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 113/250 (45%), Gaps = 8/250 (3%)
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN-CEALFDLLS-E 381
+ F + ++ Y G + +AR FD ++ + V W AL Y+ + + CEAL +
Sbjct: 94 DGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMR 153
Query: 382 FVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
GV D L +L A ++ G E+H ++ G+ + + L+ MY+KCG
Sbjct: 154 LSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCG 213
Query: 442 NMTYAEIIFQNFIE-RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAIL 500
+ A +F+ + RD+ +N MI+ +G +A+ LF M + ++ T V +L
Sbjct: 214 ILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVL 273
Query: 501 SAFRHCGSVEMGEKYFNSMTADYKISPETD-HYACMIDLYGRANQLEKAIEFMKSIPTEE 559
+ +G + ++ K E + ++ +Y + +++ A+ + I E+
Sbjct: 274 QVCTELAQLNLGRELHAAL---LKSGSEVNIQCNALLVMYTKCGRVDSALRVFREI-DEK 329
Query: 560 DAVILGSFLN 569
D + S L+
Sbjct: 330 DYISWNSMLS 339
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 80/182 (43%), Gaps = 6/182 (3%)
Query: 398 LLGACALQAALHPGKEIHAYILRMG-VQMDKKLIST-LVDMYSKCGNMTYAEIIFQNFIE 455
+L A + A+ G ++HA+ + G ++ D ++T L+ MY KCG + A ++F
Sbjct: 64 VLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSS 123
Query: 456 RDLVLYNVMIACYAHHGHEEKAILLFEEM---LEKGIKPDAVTFVAILSAFRHCGSVEMG 512
R + +N +I Y G +A+ ++ M G+ PD T ++L A G G
Sbjct: 124 RTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCG 183
Query: 513 EKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCR 572
+ + + + + T +I +Y + L+ A+ + + D S ++ C
Sbjct: 184 CE-VHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCL 242
Query: 573 LN 574
N
Sbjct: 243 QN 244
>gi|356502400|ref|XP_003520007.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 591
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 187/572 (32%), Positives = 300/572 (52%), Gaps = 42/572 (7%)
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
D A +F+ H L YN M+ ++ G A+ LF +++ + + D +T
Sbjct: 57 DFNYANRIFNHIHHPSLFIYNLMIKAFVK-RGSLRSAISLFQQLR--ERGVWPDNYTYPY 113
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L + V G ++HAF+VKT + + +SL+DMY++ E +VFE
Sbjct: 114 VLKGIGCIGEVREGEKIHAFVVKTGLEFDPYVCNSLMDMYAELGLVEGFTQVFE------ 167
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
EM PE DAVSWN +ISGYV+ EE + ++ RM
Sbjct: 168 ------------------EM--------PE-RDAVSWNIMISGYVRCKRFEEAVDVYRRM 200
Query: 251 G-ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
E+ + NE T S LSAC LRN++ KEIH ++ N L P + + ++D+YCKC
Sbjct: 201 QMESNEKPNEATVVSTLSACAVLRNLELGKEIHDYI-ANELDLTPIMGNALLDMYCKCGC 259
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
++ A + V+N +SM+ GY + G +++AR F+ ++VV+WTA+ +GYV+
Sbjct: 260 VSVAREIFDAMIVKNVNCWTSMVTGYVICGQLDQARYLFERSPSRDVVLWTAMINGYVQF 319
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
+ E L E + GV D I+V LL CA AL GK IH YI ++MD +
Sbjct: 320 NHFEDAIALFGEMQIR-GVEPDKFIVVTLLTGCAQLGALEQGKWIHNYIDENRIKMDAVV 378
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+ L++MY+KCG + + IF + D + +I A +G +A+ LFE M G+
Sbjct: 379 STALIEMYAKCGCIEKSLEIFNGLKDMDTTSWTSIICGLAMNGKTSEALELFEAMQTCGL 438
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
KPD +TFVA+LSA H G VE G K F+SM++ Y I P +HY C IDL GRA L++A
Sbjct: 439 KPDDITFVAVLSACGHAGLVEEGRKLFHSMSSIYHIEPNLEHYGCFIDLLGRAGLLQEAE 498
Query: 550 EFMKSIPTEEDAVIL---GSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYA 606
E +K +P + + +I+ G+ L+ CR N ++ L +++ ++ + + LA++YA
Sbjct: 499 ELVKKLPDQNNEIIVPLYGALLSACRTYGNIDMGERLATALAKVKSSDSSLHTLLASIYA 558
Query: 607 AEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVE 638
+ W ++ ++R +M+ + + G S + V+
Sbjct: 559 SADRWEDVRKVRSKMKDLGIKKVPGYSAIEVD 590
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 129/543 (23%), Positives = 239/543 (44%), Gaps = 104/543 (19%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
++E H +K GL N L+ +Y++ L+ ++F+EMPER+ SWN +IS
Sbjct: 124 VREGEKIHAFVVKTGLEFDPYVCNSLMDMYAELGLVEGFTQVFEEMPERDAVSWNIMIS- 182
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
GY+ + +E +A+ ++ MQ + + + +E
Sbjct: 183 ------------------------------GYVRCKRFE-EAVDVYRRMQ-MESNEKPNE 210
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
TV STL+ C L N+ G+++H + + D + ++L+DMY KC C A +F+
Sbjct: 211 ATVVSTLSACAVLRNLELGKEIHDY-IANELDLTPIMGNALLDMYCKCGCVSVAREIFDA 269
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
+ N+ +MV G+++ A F R P D V W +I+GYVQ E+ +
Sbjct: 270 MIVK-NVNCWTSMVTGYVICGQLDQARYLFERSPS-RDVVLWTAMINGYVQFNHFEDAIA 327
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
LF M GV ++ + L+ C L ++ K IH+++ +N + + VS+ ++++Y
Sbjct: 328 LFGEMQIRGVEPDKFIVVTLLTGCAQLGALEQGKWIHNYIDENRIKMDAVVSTALIEMYA 387
Query: 306 KCENMNYAESMLLLKGVR--NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
KC + +S+ + G++ ++ S +S+I G ++ G EA F+++
Sbjct: 388 KCGCIE--KSLEIFNGLKDMDTTSWTSIICGLAMNGKTSEALELFEAM------------ 433
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
Q C G+ D + V +L AC HA ++ G
Sbjct: 434 ------QTC--------------GLKPDDITFVAVLSACG-----------HAGLVEEG- 461
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
+KL ++ +Y IE +L Y I G ++A L ++
Sbjct: 462 ---RKLFHSMSSIYH---------------IEPNLEHYGCFIDLLGRAGLLQEAEELVKK 503
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRAN 543
+ ++ + + A+LSA R G+++MGE+ ++ A K S + H + +Y A+
Sbjct: 504 LPDQNNEIIVPLYGALLSACRTYGNIDMGERLATAL-AKVKSSDSSLH-TLLASIYASAD 561
Query: 544 QLE 546
+ E
Sbjct: 562 RWE 564
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 120/239 (50%), Gaps = 7/239 (2%)
Query: 321 GVRNSFSISSMIVGYSLQ---GNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFD 377
G++ I + ++ +S+ G+ A R F+ + ++ ++ + +VK + +
Sbjct: 35 GLQQDRDILNKLMAFSMDSSLGDFNYANRIFNHIHHPSLFIYNLMIKAFVKRGSLRSAIS 94
Query: 378 LLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMY 437
L + + + GV D +L + G++IHA++++ G++ D + ++L+DMY
Sbjct: 95 LFQQ-LRERGVWPDNYTYPYVLKGIGCIGEVREGEKIHAFVVKTGLEFDPYVCNSLMDMY 153
Query: 438 SKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM-LEKGIKPDAVTF 496
++ G + +F+ ERD V +N+MI+ Y E+A+ ++ M +E KP+ T
Sbjct: 154 AELGLVEGFTQVFEEMPERDAVSWNIMISGYVRCKRFEEAVDVYRRMQMESNEKPNEATV 213
Query: 497 VAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSI 555
V+ LSA ++E+G++ + + + ++P + ++D+Y + + A E ++
Sbjct: 214 VSTLSACAVLRNLELGKEIHDYIANELDLTPIMGN--ALLDMYCKCGCVSVAREIFDAM 270
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 84/171 (49%), Gaps = 11/171 (6%)
Query: 396 VILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLV--DMYSKCGNMTYAEIIFQNF 453
+ LL +C + L K+I A+I G+Q D+ +++ L+ M S G+ YA IF +
Sbjct: 12 ISLLKSCKSMSQL---KQIQAHIFCFGLQQDRDILNKLMAFSMDSSLGDFNYANRIFNHI 68
Query: 454 IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
L +YN+MI + G AI LF+++ E+G+ PD T+ +L G V GE
Sbjct: 69 HHPSLFIYNLMIKAFVKRGSLRSAISLFQQLRERGVWPDNYTYPYVLKGIGCIGEVREGE 128
Query: 514 KYFNSMTADYKISPETDHYAC--MIDLYGRANQLEKAIEFMKSIPTEEDAV 562
K + K E D Y C ++D+Y +E + + +P E DAV
Sbjct: 129 KIHAFVV---KTGLEFDPYVCNSLMDMYAELGLVEGFTQVFEEMP-ERDAV 175
>gi|255584337|ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527338|gb|EEF29484.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 200/618 (32%), Positives = 300/618 (48%), Gaps = 84/618 (13%)
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYI-NAEGYEADALKLFIEMQSADEH 120
+ISA H + A ++F+ ++ YN+++ ++ N++ +A A F +MQ
Sbjct: 61 LISAFSLCHQMNLAVNVFNQIQDPNVHLYNTLIRAHVQNSQSLKAFAT--FFDMQK--NG 116
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
+ D FT L C + + +H + K F +SLID YSKC
Sbjct: 117 LFADNFTYPFLLKACNGKGWLPTVQMIHCHVEKYGFFGDLFVPNSLIDSYSKC------- 169
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
L+ N A+K F E D VSWN++I G V+ GD
Sbjct: 170 ----------GLLGVN-------------YAMKLFMEMGE-KDLVSWNSMIGGLVKAGDL 205
Query: 241 EEGLKLFVRMGE-NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
KLF M E + V WN
Sbjct: 206 GRARKLFDEMAERDAVSWNT---------------------------------------- 225
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
I+D Y K M+ A ++ RN S S+M+ GY G+ME AR FD + KN+V W
Sbjct: 226 ILDGYVKAGEMSQAFNLFEKMPERNVVSWSTMVSGYCKTGDMEMARMLFDKMPFKNLVTW 285
Query: 360 TALFSGYVK---AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHA 416
T + SG+ + A+ L++ + G+ D L+ +L ACA L GK++HA
Sbjct: 286 TIIISGFAEKGLAKEATTLYNQME----AAGLKPDDGTLISILAACAESGLLVLGKKVHA 341
Query: 417 YILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
I ++ ++ + + LVDMY+KCG + A IF RDLV +N M+ A HGH EK
Sbjct: 342 SIKKIRIKCSVNVSNALVDMYAKCGRVDKALSIFNEMSMRDLVSWNCMLQGLAMHGHGEK 401
Query: 477 AILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMI 536
AI LF +M ++G KPD VT +AIL A H G V+ G YFNSM D+ I P +HY CMI
Sbjct: 402 AIQLFSKMQQEGFKPDKVTLIAILCACTHAGFVDQGLSYFNSMERDHGIVPHIEHYGCMI 461
Query: 537 DLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKA 596
DL GR +LE+A ++S+P E + VI G+ L CR++ LA + ++L+ LE ++
Sbjct: 462 DLLGRGGRLEEAFRLVQSMPMEPNDVIWGTLLGACRVHNAVPLAEKVLDRLITLEQSDPG 521
Query: 597 RYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNA 656
Y L+N++AA G+W + +R QM+ + +G S + ++ E+H FTV D SHP+T+
Sbjct: 522 NYSMLSNIFAAAGDWNSVANMRLQMKSTGVQKPSGASSIELDDEVHEFTVFDKSHPETDK 581
Query: 657 IYSVLAIFTGELYEIAGA 674
IY +L +L ++A A
Sbjct: 582 IYQILVKLGQDLKQVAYA 599
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 178/397 (44%), Gaps = 60/397 (15%)
Query: 171 SKCRCYEEACRVFEGCTE-------EVNLISKN---------AMVAACCREGEMEMALKT 214
S R +EE + CT+ +I +N +++A +M +A+
Sbjct: 18 STRRLFEEKLQDLHKCTDFNHIKEVHAQIIKRNLHNDLYVAPKLISAFSLCHQMNLAVNV 77
Query: 215 FWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRN 274
F Q + + +NTLI +VQN + + F M +NG+ + T+ L AC G
Sbjct: 78 F-NQIQDPNVHLYNTLIRAHVQNSQSLKAFATFFDMQKNGLFADNFTYPFLLKACNGKGW 136
Query: 275 VKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE--NMNYAESMLLLKGVRNSFSISSMI 332
+ + IH V K G + FV + ++D Y KC +NYA + + G ++ S +SMI
Sbjct: 137 LPTVQMIHCHVEKYGFFGDLFVPNSLIDSYSKCGLLGVNYAMKLFMEMGEKDLVSWNSMI 196
Query: 333 VGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDA 392
G G++ AR+ FD + E++ V W + GYVKA F+L +
Sbjct: 197 GGLVKAGDLGRARKLFDEMAERDAVSWNTILDGYVKAGEMSQAFNLFEKM---------- 246
Query: 393 LILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQN 452
P + + ++ ST+V Y K G+M A ++F
Sbjct: 247 -----------------PERNVVSW-------------STMVSGYCKTGDMEMARMLFDK 276
Query: 453 FIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMG 512
++LV + ++I+ +A G ++A L+ +M G+KPD T ++IL+A G + +G
Sbjct: 277 MPFKNLVTWTIIISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLISILAACAESGLLVLG 336
Query: 513 EKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
+K S+ +I + ++D+Y + +++KA+
Sbjct: 337 KKVHASIKK-IRIKCSVNVSNALVDMYAKCGRVDKAL 372
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 165/364 (45%), Gaps = 71/364 (19%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
++ N ++ Y K + ++ LF++MPERNV SW+T++S K+ D++ AR LFD P K
Sbjct: 221 VSWNTILDGYVKAGEMSQAFNLFEKMPERNVVSWSTMVSGYCKTGDMEMARMLFDKMPFK 280
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR 145
+LVT+ ++ G+ +G +A L+ +M++A ++ D+ T+ S L C + + G+
Sbjct: 281 NLVTWTIIISGFAE-KGLAKEATTLYNQMEAAG--LKPDDGTLISILAACAESGLLVLGK 337
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
++HA + K S ++L+DMY+KC ++A +F
Sbjct: 338 KVHASIKKIRIKCSVNVSNALVDMYAKCGRVDKALSIFN--------------------- 376
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASA 265
EM+++ D VSWN ++ G +G E+ ++LF +M + G + ++ T +
Sbjct: 377 ---EMSMR---------DLVSWNCMLQGLAMHGHGEKAIQLFSKMQQEGFKPDKVTLIAI 424
Query: 266 LSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNS 325
L AC +G VD + ++Y SM G+
Sbjct: 425 LCAC--------------------------THAGFVD-----QGLSYFNSMERDHGIVPH 453
Query: 326 FS-ISSMIVGYSLQGNMEEARRHFDSLT-EKNVVVWTALFSGYVKAQNCEALFD-LLSEF 382
MI G +EEA R S+ E N V+W L G + N L + +L
Sbjct: 454 IEHYGCMIDLLGRGGRLEEAFRLVQSMPMEPNDVIWGTLL-GACRVHNAVPLAEKVLDRL 512
Query: 383 VTKE 386
+T E
Sbjct: 513 ITLE 516
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 120/281 (42%), Gaps = 45/281 (16%)
Query: 279 KEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQ 338
KE+H+ ++K L ++ +V+ ++ + C MN A ++
Sbjct: 40 KEVHAQIIKRNLHNDLYVAPKLISAFSLCHQMNLAVNV---------------------- 77
Query: 339 GNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF-VTKEGVVTDALILVI 397
F+ + + NV ++ L +V QN ++L + F + K G+ D
Sbjct: 78 ---------FNQIQDPNVHLYNTLIRAHV--QNSQSLKAFATFFDMQKNGLFADNFTYPF 126
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCG--NMTYAEIIFQNFIE 455
LL AC + L + IH ++ + G D + ++L+D YSKCG + YA +F E
Sbjct: 127 LLKACNGKGWLPTVQMIHCHVEKYGFFGDLFVPNSLIDSYSKCGLLGVNYAMKLFMEMGE 186
Query: 456 RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKY 515
+DLV +N MI G +A LF+EM E+ DAV++ IL + G +
Sbjct: 187 KDLVSWNSMIGGLVKAGDLGRARKLFDEMAER----DAVSWNTILDGYVKAGEMSQAFNL 242
Query: 516 FNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIP 556
F M +S ++ M+ Y + +E A +P
Sbjct: 243 FEKMPERNVVS-----WSTMVSGYCKTGDMEMARMLFDKMP 278
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 207/671 (30%), Positives = 329/671 (49%), Gaps = 54/671 (8%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRE---SRKLFDEMPERNVFSWNT 61
+L +A H ++ L T T L+ Y+ L S L +P +FS+++
Sbjct: 15 SLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHPTLFSFSS 74
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I A +SH PH L T++ + L+L
Sbjct: 75 LIHAFARSHHF----------PHV-LTTFSHL------------HPLRLIP--------- 102
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
D F + S + C L + G+QLHAF + SSL MY KC +A +
Sbjct: 103 --DAFLLPSAIKSCASLRALDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARK 160
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWR------QPELNDAVSWNTLISGYV 235
+F+ + +++ +AM+A R G +E A + F +P L VSWN +++G+
Sbjct: 161 LFDRMPDR-DVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNL---VSWNGMLAGFG 216
Query: 236 QNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF 295
NG +E + +F M G + T + L A L +V ++H +V+K GL S+ F
Sbjct: 217 NNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKF 276
Query: 296 VSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHF----DSL 351
V S ++D+Y KC + + S+++ + G S G ++ A F D
Sbjct: 277 VVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQK 336
Query: 352 TEKNVVVWTALFSGYVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHP 410
E NVV WT++ + + ++ EAL +L + + GV +A+ + L+ AC +AL
Sbjct: 337 MELNVVTWTSIIASCSQNGKDLEAL-ELFRD-MQAYGVEPNAVTIPSLIPACGNISALMH 394
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
GKEIH + LR G+ D + S L+DMY+KCG + A F +LV +N ++ YA
Sbjct: 395 GKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAM 454
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD 530
HG ++ + +F ML+ G KPD VTF +LSA G E G + +NSM+ ++ I P+ +
Sbjct: 455 HGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKME 514
Query: 531 HYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRL 590
HYAC++ L R +LE+A +K +P E DA + G+ L+ CR++ N L A EKL L
Sbjct: 515 HYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCRVHNNLSLGEIAAEKLFFL 574
Query: 591 EGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVS 650
E N Y+ L+N+YA++G W E RIR+ M+ + G SW+ V H++H+ GD S
Sbjct: 575 EPTNPGNYILLSNIYASKGLWDEENRIREVMKSKGLRKNPGYSWIEVGHKVHMLLAGDQS 634
Query: 651 HPKTNAIYSVL 661
HP+ I L
Sbjct: 635 HPQMKDILEKL 645
>gi|242034539|ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
gi|241918518|gb|EER91662.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
Length = 650
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 168/479 (35%), Positives = 270/479 (56%), Gaps = 4/479 (0%)
Query: 196 NAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG- 254
NA V G M +A + F P D VSWNTLI GYV++G E L+LF R+ E+G
Sbjct: 160 NAGVHFWSVSGSMVLARRLFDESPA-RDVVSWNTLIGGYVRSGLPREALELFWRLVEDGK 218
Query: 255 -VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA 313
VR +E T A+S C + +++ K +H +V G+ + + ++D+Y KC ++ A
Sbjct: 219 AVRPDEVTMIGAVSGCAQMGDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELA 278
Query: 314 ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE 373
+S+ + S ++MIVG++ G ME+AR FD + E++V W AL +GYV+ + +
Sbjct: 279 KSVFERIDNKTVVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGK 338
Query: 374 ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL 433
L E + + V + + +V LL AC+ AL G +H YI R + + L ++L
Sbjct: 339 EAIALFHE-MQESKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHQLYLSVALGTSL 397
Query: 434 VDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDA 493
VDMY+KCGN+ A IF+ +++ + + MI A+HGH ++AI F+ M++ G++PD
Sbjct: 398 VDMYAKCGNIKKAICIFKEIPDKNALTWTAMICGLANHGHADEAIEYFQRMIDLGLQPDE 457
Query: 494 VTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMK 553
+TF+ +LSA H G V+ G ++F+ M Y + + HY+CMIDL GRA L++A + +
Sbjct: 458 ITFIGVLSACCHAGLVKEGRQFFSLMHEKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVN 517
Query: 554 SIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAE 613
++P + DAV+ G+ CR++ N L +A KL+ L+ ++ YV LAN+YA +
Sbjct: 518 TMPMDPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMRKK 577
Query: 614 MGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
++R MR + + GCS + + +H F V D SH T AIY L T ++ A
Sbjct: 578 ADKVRVMMRHLGVEKVPGCSCIELNGVVHEFIVKDKSHLDTIAIYDCLHGITLQMKHTA 636
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 135/541 (24%), Positives = 232/541 (42%), Gaps = 105/541 (19%)
Query: 9 ALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIK 68
A++ HVQ K G + N +H +S + +R+LFDE P R+V SWNT+I ++
Sbjct: 142 AVLGHVQ--KLGFSADVFVVNAGVHFWSVSGSMVLARRLFDESPARDVVSWNTLIGGYVR 199
Query: 69 SHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
S G +AL+LF + + +R DE T+
Sbjct: 200 S--------------------------------GLPREALELFWRLVEDGKAVRPDEVTM 227
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE 188
++ C ++ ++ G++LH F+ + +++++DMY KC E A VFE
Sbjct: 228 IGAVSGCAQMGDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFERIDN 287
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
+ ++S M+ R G ME A F PE D WN L++GYVQN +E + LF
Sbjct: 288 K-TVVSWTTMIVGHARLGMMEDARMLFDEMPE-RDVFPWNALMAGYVQNKQGKEAIALFH 345
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
M E+ V NE T + LSAC L ++ +H ++ ++ L + + + +VD+Y KC
Sbjct: 346 EMQESKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHQLYLSVALGTSLVDMYAKC- 404
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
GN+++A F + +KN + WTA+ G
Sbjct: 405 ------------------------------GNIKKAICIFKEIPDKNALTWTAMICGLAN 434
Query: 369 AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK 428
+ + + + G+ D + + +L AC HA +++ G ++
Sbjct: 435 HGHADEAIEYFQRMIDL-GLQPDEITFIGVLSACC-----------HAGLVKEG----RQ 478
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
S + + Y +ER + Y+ MI GH ++A L M
Sbjct: 479 FFSLMHEKYH---------------LERKMKHYSCMIDLLGRAGHLDEAEQLVNTM---P 520
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISP-ETDHYACMIDLYGRANQLEK 547
+ PDAV + A+ A R G++ +GEK + ++ P ++ Y + ++Y AN +K
Sbjct: 521 MDPDAVVWGALFFACRMHGNITLGEKAAMKLV---ELDPSDSGIYVLLANMYAEANMRKK 577
Query: 548 A 548
A
Sbjct: 578 A 578
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 2/127 (1%)
Query: 390 TDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEII 449
D L LL ACA G + ++ ++G D +++ V +S G+M A +
Sbjct: 119 PDHLTFPFLLKACARLQYRPYGAAVLGHVQKLGFSADVFVVNAGVHFWSVSGSMVLARRL 178
Query: 450 FQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG--IKPDAVTFVAILSAFRHCG 507
F RD+V +N +I Y G +A+ LF ++E G ++PD VT + +S G
Sbjct: 179 FDESPARDVVSWNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDEVTMIGAVSGCAQMG 238
Query: 508 SVEMGEK 514
+E+G++
Sbjct: 239 DLELGKR 245
>gi|293336045|ref|NP_001168520.1| uncharacterized protein LOC100382300 [Zea mays]
gi|195615774|gb|ACG29717.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
gi|223946951|gb|ACN27559.1| unknown [Zea mays]
Length = 616
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 177/535 (33%), Positives = 285/535 (53%), Gaps = 20/535 (3%)
Query: 143 FGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAAC 202
GR +HA +VKT+ + + L+ +YS A + F + N S N ++AA
Sbjct: 58 LGRAVHAHLVKTALTSHTLLSNRLVALYSSLPSPAAAVKAFYDLPHK-NAHSYNTLLAAL 116
Query: 203 CREGE-MEMALKTFWRQP-ELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGEN-----GV 255
R + + A + F P + + VS+NTL+S +G E L++ R+ + G+
Sbjct: 117 LRRPDTLPDAFRLFDTMPADSRNLVSYNTLMSSLAHHGRQVEALRVVARLARDRFLGPGL 176
Query: 256 RWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAES 315
+ T S +AC G+ + +E+H V+ +G+ +++ +++ Y K + A
Sbjct: 177 AMDRFTVVSVATACAGIGAARPLREMHGAVVVSGMEFTVIMANAMLNAYSKARRVEDARH 236
Query: 316 MLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEAL 375
+ +R++ + +SMI GY + EA + FD + +K+ + WTAL SG+ + +
Sbjct: 237 LFDQVSIRDNVTWTSMISGYCQVKKLHEAVQVFDMMPDKDRIAWTALISGHEQNGEEDTA 296
Query: 376 FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM---GVQMDKKLIST 432
+L + + K GV +LV LGACA + GKE+H +ILR V + + +
Sbjct: 297 LELFEQMLAK-GVSPTPFVLVSALGACAKLGLVTRGKELHCFILRRNIGSVPFNIFIHNA 355
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
LVDMYSKCG+M A +F ERD + +N M+ ++H+G ++++ +FEEML G++P
Sbjct: 356 LVDMYSKCGDMMAAMAVFDWMPERDFISWNSMVTGFSHNGLGKQSLAIFEEMLVAGVRPT 415
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
VTF+A+L+A H G V G SM D+ + P +HYA ID GR +QLE+A EF+
Sbjct: 416 HVTFLAVLTACSHSGLVSNGRLVLESME-DHGVEPRAEHYAAFIDALGRNHQLEEATEFI 474
Query: 553 KSIPTEEDAVILGSF---LNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEG 609
K +P+ GS+ L CRL+ N ELA E E L RLE N RYV ++N+YAA G
Sbjct: 475 KDLPSRIGPGTAGSWGALLGACRLHGNIELAEEVAEFLFRLEPGNSGRYVMMSNIYAAAG 534
Query: 610 NWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLA 662
W + R+R M +G+K ++ SW+ V H+F D+SH + + IY +L
Sbjct: 535 QWDDARRVRGLMKEKGLKKDQ--AYSWIEVRSAKHVFVADDISHCEADKIYEMLG 587
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 178/336 (52%), Gaps = 12/336 (3%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHD- 71
H +K LT T+ +N+L+ +YS + K F ++P +N S+NT+++A ++ D
Sbjct: 63 HAHLVKTALTSHTLLSNRLVALYSSLPSPAAAVKAFYDLPHKNAHSYNTLLAALLRRPDT 122
Query: 72 LKQARSLFDSSP--HKDLVTYNSMLCGYINAEGYEADALKLFIEM---QSADEHIRMDEF 126
L A LFD+ P ++LV+YN+++ + G + +AL++ + + + MD F
Sbjct: 123 LPDAFRLFDTMPADSRNLVSYNTLMSSLAH-HGRQVEALRVVARLARDRFLGPGLAMDRF 181
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
TV S C + R++H +V + + + +++++ YSK R E+A +F+
Sbjct: 182 TVVSVATACAGIGAARPLREMHGAVVVSGMEFTVIMANAMLNAYSKARRVEDARHLFDQV 241
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
+ N ++ +M++ C+ ++ A++ F P+ D ++W LISG+ QNG+ + L+L
Sbjct: 242 SIRDN-VTWTSMISGYCQVKKLHEAVQVFDMMPD-KDRIAWTALISGHEQNGEEDTALEL 299
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP---FVSSGIVDV 303
F +M GV SAL AC L V KE+H ++L+ + S P F+ + +VD+
Sbjct: 300 FEQMLAKGVSPTPFVLVSALGACAKLGLVTRGKELHCFILRRNIGSVPFNIFIHNALVDM 359
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQG 339
Y KC +M A ++ R+ S +SM+ G+S G
Sbjct: 360 YSKCGDMMAAMAVFDWMPERDFISWNSMVTGFSHNG 395
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 134/280 (47%), Gaps = 50/280 (17%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + +G+ T I N +++ YSK + ++R LFD++ R+ +W ++IS + L
Sbjct: 203 HGAVVVSGMEFTVIMANAMLNAYSKARRVEDARHLFDQVSIRDNVTWTSMISGYCQVKKL 262
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+A +FD P KD + + +++ G+ G E AL+LF +M + + + F + S L
Sbjct: 263 HEAVQVFDMMPDKDRIAWTALISGH-EQNGEEDTALELFEQMLA--KGVSPTPFVLVSAL 319
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAV---SSLIDMYSKCRCYEEACRVFEGCTEE 189
C KL V G++LH F+++ + + F + ++L+DMYSKC
Sbjct: 320 GACAKLGLVTRGKELHCFILRRNIGSVPFNIFIHNALVDMYSKC---------------- 363
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
G+M A+ F PE D +SWN++++G+ NG ++ L +F
Sbjct: 364 ----------------GDMMAAMAVFDWMPE-RDFISWNSMVTGFSHNGLGKQSLAIFEE 406
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG 289
M GVR TF + L+AC HS ++ NG
Sbjct: 407 MLVAGVRPTHVTFLAVLTACS-----------HSGLVSNG 435
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 1037
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 191/667 (28%), Positives = 323/667 (48%), Gaps = 99/667 (14%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L + + H AIKAG++ I L+ +YSK
Sbjct: 378 LHKGMQLHSHAIKAGMSADIILEGSLLDLYSK---------------------------- 409
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
C D++ A F ++ +++V +N ML Y + +D+ ++F +MQ E + ++
Sbjct: 410 CA---DVETAHKFFLTTETENIVLWNVMLVAYGQLDNL-SDSFEIFRQMQM--EGMIPNQ 463
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
FT S L C L + G Q+H ++KT + + S LIDMY+K
Sbjct: 464 FTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAK------------- 510
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
G++ +AL+ R PE +D VSW +I+GYVQ+ E L+
Sbjct: 511 -------------------YGQLALALRILRRLPE-DDVVSWTAMIAGYVQHDMFSEALQ 550
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
LF M G++++ FASA+SAC G+R ++ ++IH+ G ++ +++ ++ +Y
Sbjct: 551 LFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYA 610
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
+C G ++EA F+ + +KN + W +L SG
Sbjct: 611 RC-------------------------------GRIQEAYLAFEKIGDKNNISWNSLVSG 639
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
++ E + + E V + + A A A + G++IH+ +L+ G
Sbjct: 640 LAQSGYFEEALQVFVRMLRTEAEV-NMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDS 698
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
++++ ++L+ +Y+K G+++ A F + ER+++ +N MI Y+ HG +A+ LFEEM
Sbjct: 699 EREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMK 758
Query: 486 EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQL 545
GI P+ VTFV +LSA H G V+ G YF SM + + P+++HY C++DL GRA QL
Sbjct: 759 VCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQL 818
Query: 546 EKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVY 605
++A+E++K +P DA+I + L+ C +++N E+ A LL LE + A YV ++N+Y
Sbjct: 819 DRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIY 878
Query: 606 AAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFT 665
A W RK M+ + G SW+ V++ +H F GD HP TN IY +
Sbjct: 879 AVSRQWIHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLN 938
Query: 666 GELYEIA 672
EI
Sbjct: 939 RRTSEIG 945
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 125/506 (24%), Positives = 230/506 (45%), Gaps = 83/506 (16%)
Query: 48 FDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADA 107
FD P N +I K+ ++ A+ +F+ KD+VT+ +M+ G ++ G E +A
Sbjct: 191 FDSSP----LVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISG-LSQNGLEEEA 245
Query: 108 LKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLI 167
+ LF +M +++ I + ++S L+ K+ G QLH ++K + + + L+
Sbjct: 246 ILLFCDMHASE--IFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLV 303
Query: 168 DMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSW 227
+YS+ R A R+F D VS+
Sbjct: 304 ALYSRSRKLISAERIFSTMNSR---------------------------------DGVSY 330
Query: 228 NTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLK 287
N+LISG VQ G ++ L+LF +M + ++ + T AS LSAC + + ++HS +K
Sbjct: 331 NSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIK 390
Query: 288 NGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRH 347
G+ ++ + ++D+Y KC ++E A +
Sbjct: 391 AGMSADIILEGSLLDLYSKC-------------------------------ADVETAHKF 419
Query: 348 FDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAA 407
F + +N+V+W + Y + N F++ + + EG++ + +L C A
Sbjct: 420 FLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQ-MQMEGMIPNQFTYPSILRTCTSLGA 478
Query: 408 LHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIAC 467
L+ G++IH ++++ G Q++ + S L+DMY+K G + A I + E D+V + MIA
Sbjct: 479 LYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAG 538
Query: 468 YAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK-----YFNSMTAD 522
Y H +A+ LFEEM +GI+ D + F + +SA ++ G++ Y AD
Sbjct: 539 YVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGAD 598
Query: 523 YKISPETDHYACMIDLYGRANQLEKA 548
I+ +I LY R ++++A
Sbjct: 599 LSINN------ALISLYARCGRIQEA 618
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 121/489 (24%), Positives = 219/489 (44%), Gaps = 69/489 (14%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N +++ +S L A +F + +D V+YNS++ G + +G+ AL+LF +MQ +
Sbjct: 300 NGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQ-QGFSDRALELFTKMQR--D 356
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
++ D TV S L+ C + + G QLH+ +K A SL+D+YSKC
Sbjct: 357 CLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKC------ 410
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
++E A K F+ E + V WN ++ Y Q +
Sbjct: 411 --------------------------ADVETAHK-FFLTTETENIVLWNVMLVAYGQLDN 443
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
+ ++F +M G+ N+ T+ S L C L + ++IH+ V+K G N +V S
Sbjct: 444 LSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSV 503
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
++D+Y K Y + L L+ +R L E +VV W
Sbjct: 504 LIDMYAK-----YGQLALALRILRR--------------------------LPEDDVVSW 532
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
TA+ +GYV+ L E + G+ D + + ACA AL G++IHA
Sbjct: 533 TAMIAGYVQHDMFSEALQLFEEMEYR-GIQFDNIGFASAISACAGIRALRQGQQIHAQSY 591
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
G D + + L+ +Y++CG + A + F+ +++ + +N +++ A G+ E+A+
Sbjct: 592 AAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQ 651
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
+F ML + + T+ + +SA +++ G++ +SM E + +I LY
Sbjct: 652 VFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQ-IHSMVLKTGYDSEREVSNSLISLY 710
Query: 540 GRANQLEKA 548
++ + A
Sbjct: 711 AKSGSISDA 719
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 167/381 (43%), Gaps = 38/381 (9%)
Query: 180 CRVFE-GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
CR+ + G E LI +++V R G+ A+K F + SWN +I +V
Sbjct: 82 CRISKSGFDGEPLLI--DSLVDNYFRHGDQHGAVKVF-DENSNRSVFSWNKMIHVFVAQK 138
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLR-NVKCAKEIHSWVLKNGLISNPFVS 297
+ LF RM G+ N +TFA L AC G K++HS G S+P V+
Sbjct: 139 SNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVA 198
Query: 298 SGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVV 357
+ ++D+Y K G +E A++ F+ + K++V
Sbjct: 199 NLLIDLYSK-------------------------------NGYIESAKKVFNCICMKDIV 227
Query: 358 VWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
W A+ SG + E L + E T ++ +L + +Q G+++H
Sbjct: 228 TWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQL-FELGEQLHCL 286
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
+++ G + + + LV +YS+ + AE IF RD V YN +I+ G ++A
Sbjct: 287 VIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRA 346
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID 537
+ LF +M +KPD +T ++LSA G++ G + +S +S + ++D
Sbjct: 347 LELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQ-LHSHAIKAGMSADIILEGSLLD 405
Query: 538 LYGRANQLEKAIEFMKSIPTE 558
LY + +E A +F + TE
Sbjct: 406 LYSKCADVETAHKFFLTTETE 426
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 72/173 (41%), Gaps = 6/173 (3%)
Query: 379 LSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYS 438
L F+ + GV ++ + LL C +L +H I + G + LI +LVD Y
Sbjct: 45 LMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYF 104
Query: 439 KCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVA 498
+ G+ A +F R + +N MI + + LF ML +GI P+ TF
Sbjct: 105 RHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAG 164
Query: 499 ILSAFRHCGSVEMGEKY---FNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
+L A C ++ Y +S T Y +IDLY + +E A
Sbjct: 165 VLKA---CVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESA 214
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 90/241 (37%), Gaps = 69/241 (28%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
N+K+ H +K G +N LI +Y+K + ++ + F++M ERNV SWN +I+
Sbjct: 680 NIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMIT 739
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
Y+ CG +AL+LF EM+ I +
Sbjct: 740 G------------------------YSQHGCG--------MEALRLFEEMKVCG--IMPN 765
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSND--ASGFAVSSLIDMYSKCRCYEEACRV 182
T L+ C H +VK D S F + L+ C
Sbjct: 766 HVTFVGVLSACS-----------HIGLVKEGLDYFESMFKIHDLVPKSEHYVCV------ 808
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
V+L+ R G+++ A++ P DA+ W TL+S V + + E
Sbjct: 809 -------VDLLG---------RAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEI 852
Query: 243 G 243
G
Sbjct: 853 G 853
>gi|357146098|ref|XP_003573875.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 652
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 175/553 (31%), Positives = 285/553 (51%), Gaps = 37/553 (6%)
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
R D T L C +L +G + ++ A F V++ + + C EA +
Sbjct: 117 RPDHLTFPFLLKACARLQERNYGNAVLGNVLSLGFHADVFVVNAAMHFLAVCSSMAEARK 176
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F+G + D VSWNTLI GYV+ G
Sbjct: 177 LFDGS---------------------------------HVRDLVSWNTLIGGYVRRGVPR 203
Query: 242 EGLKLFVRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
E L++F RM G+ V +E T +S LR+++ + +H +V +G+ + + +
Sbjct: 204 EALEMFWRMVGDGAVTPDEVTMIGVVSGSAQLRDLELGRRLHGYVESHGVRCTVRLMNVV 263
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
+D+Y KC ++ A+S+ + S ++MIVGY+ G M++AR+ FD + E++V W
Sbjct: 264 MDMYIKCGDLERAKSVFEGIDKKTIVSWTTMIVGYAQFGLMDDARKVFDEMPERDVFPWN 323
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVV-TDALILVILLGACALQAALHPGKEIHAYIL 419
AL +GYV+ + + L + +E +V D + +V LL AC+ AL G +H YI
Sbjct: 324 ALMTGYVQCKRGKEALRLFHDM--QEAMVEPDDITMVNLLSACSQLGALEMGMWVHHYID 381
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
R V + L + LVDMYSKCGN+ A +F+ E++ + + MI+ A+HGH + AI
Sbjct: 382 RRRVSLSVMLGTNLVDMYSKCGNIEKAIRVFKEIPEKNALTWTAMISGLANHGHADVAIK 441
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
F+ M+E G++PD +TF+ +LSA H G V+ G+++F+ M + Y + + HY+CM+DL
Sbjct: 442 YFQRMIELGLQPDEITFIGVLSACCHAGLVKEGQEFFSLMVSKYHLERKMKHYSCMVDLL 501
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYV 599
GRA L++A + ++P E DAV+ G+ CR++ N L +A KL+ L+ + YV
Sbjct: 502 GRAGYLDEAEHLVNTMPMEPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPGDSGIYV 561
Query: 600 QLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYS 659
LAN+YA + ++R MR + + GCS + + +H F V D SH AIY
Sbjct: 562 LLANMYAEANMRKKADKVRVMMRHLGVEKVPGCSCIELNGVVHEFIVKDKSHTDIAAIYD 621
Query: 660 VLAIFTGELYEIA 672
L T ++ A
Sbjct: 622 CLHEITLQIEHTA 634
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 127/495 (25%), Positives = 224/495 (45%), Gaps = 73/495 (14%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
+VF N + + +AR LFD S +DLV++N+++ GY+ G +AL++F M
Sbjct: 154 DVFVVNAAMHFLAVCSSMAEARKLFDGSHVRDLVSWNTLIGGYVR-RGVPREALEMFWRM 212
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
D + DE T+ ++ +L ++ GR+LH ++ + ++ ++DMY KC
Sbjct: 213 -VGDGAVTPDEVTMIGVVSGSAQLRDLELGRRLHGYVESHGVRCTVRLMNVVMDMYIKCG 271
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
E A VFEG ++ ++S M+ + G M+ A K F PE D WN L++GY
Sbjct: 272 DLERAKSVFEG-IDKKTIVSWTTMIVGYAQFGLMDDARKVFDEMPE-RDVFPWNALMTGY 329
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
VQ +E L+LF M E V ++ T + LSAC L ++ +H ++ + + +
Sbjct: 330 VQCKRGKEALRLFHDMQEAMVEPDDITMVNLLSACSQLGALEMGMWVHHYIDRRRVSLSV 389
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
+ + +VD+Y KC GN+E+A R F + EK
Sbjct: 390 MLGTNLVDMYSKC-------------------------------GNIEKAIRVFKEIPEK 418
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
N + WTA+ SG + + + + G+ D + + +L AC
Sbjct: 419 NALTWTAMISGLANHGHADVAIKYFQRMI-ELGLQPDEITFIGVLSACC----------- 466
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
HA +++ G ++ S +V Y +ER + Y+ M+ G+
Sbjct: 467 HAGLVKEG----QEFFSLMVSKY---------------HLERKMKHYSCMVDLLGRAGYL 507
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISP-ETDHYA 533
++A L M ++PDAV + A+ A R G++ +GEK + ++ P ++ Y
Sbjct: 508 DEAEHLVNTM---PMEPDAVVWGALFFACRMHGNITLGEKAAMKLV---ELDPGDSGIYV 561
Query: 534 CMIDLYGRANQLEKA 548
+ ++Y AN +KA
Sbjct: 562 LLANMYAEANMRKKA 576
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 133/253 (52%), Gaps = 9/253 (3%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
+R L L L +V++ G+ T N ++ +Y K L ++ +F+ + ++ + SW
Sbjct: 235 LRDLELGRRLHGYVES--HGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGIDKKTIVSWT 292
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
T+I + + AR +FD P +D+ +N+++ GY+ + + +AL+LF +MQ A
Sbjct: 293 TMIVGYAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGK-EALRLFHDMQEA--M 349
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
+ D+ T+ + L+ C +L + G +H ++ + S ++L+DMYSKC E+A
Sbjct: 350 VEPDDITMVNLLSACSQLGALEMGMWVHHYIDRRRVSLSVMLGTNLVDMYSKCGNIEKAI 409
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN---DAVSWNTLISGYVQN 237
RVF+ E+ N ++ AM++ G ++A+K F R EL D +++ ++S
Sbjct: 410 RVFKEIPEK-NALTWTAMISGLANHGHADVAIKYFQRMIELGLQPDEITFIGVLSACCHA 468
Query: 238 GDAEEGLKLFVRM 250
G +EG + F M
Sbjct: 469 GLVKEGQEFFSLM 481
>gi|223948849|gb|ACN28508.1| unknown [Zea mays]
gi|413937254|gb|AFW71805.1| hypothetical protein ZEAMMB73_337002 [Zea mays]
Length = 608
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 177/535 (33%), Positives = 285/535 (53%), Gaps = 20/535 (3%)
Query: 143 FGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAAC 202
GR +HA +VKT+ + + L+ +YS A + F + N S N ++AA
Sbjct: 50 LGRAVHAHLVKTALTSHTLLSNRLVALYSSLPSPAAAVKAFYDLPHK-NAHSYNTLLAAL 108
Query: 203 CREGE-MEMALKTFWRQP-ELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGEN-----GV 255
R + + A + F P + + VS+NTL+S +G E L++ R+ + G+
Sbjct: 109 LRRPDTLPDAFRLFDTMPADSRNLVSYNTLMSSLAHHGRQVEALRVVARLARDRFLGPGL 168
Query: 256 RWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAES 315
+ T S +AC G+ + +E+H V+ +G+ +++ +++ Y K + A
Sbjct: 169 AMDRFTVVSVATACAGIGAARPLREMHGAVVVSGMEFTVIMANAMLNAYSKARRVEDARH 228
Query: 316 MLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEAL 375
+ +R++ + +SMI GY + EA + FD + +K+ + WTAL SG+ + +
Sbjct: 229 LFDQVSIRDNVTWTSMISGYCQVKKLHEAVQVFDMMPDKDRIAWTALISGHEQNGEEDTA 288
Query: 376 FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM---GVQMDKKLIST 432
+L + + K GV +LV LGACA + GKE+H +ILR V + + +
Sbjct: 289 LELFEQMLAK-GVSPTPFVLVSALGACAKLGLVTRGKELHCFILRRNIGSVPFNIFIHNA 347
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
LVDMYSKCG+M A +F ERD + +N M+ ++H+G ++++ +FEEML G++P
Sbjct: 348 LVDMYSKCGDMMAAMAVFDWMPERDFISWNSMVTGFSHNGLGKQSLAIFEEMLVAGVRPT 407
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
VTF+A+L+A H G V G SM D+ + P +HYA ID GR +QLE+A EF+
Sbjct: 408 HVTFLAVLTACSHSGLVSNGRLVLESME-DHGVEPRAEHYAAFIDALGRNHQLEEATEFI 466
Query: 553 KSIPTEEDAVILGSF---LNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEG 609
K +P+ GS+ L CRL+ N ELA E E L RLE N RYV ++N+YAA G
Sbjct: 467 KDLPSRIGPGTAGSWGALLGACRLHGNIELAEEVAEFLFRLEPGNSGRYVMMSNIYAAAG 526
Query: 610 NWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLA 662
W + R+R M +G+K ++ SW+ V H+F D+SH + + IY +L
Sbjct: 527 QWDDARRVRGLMKEKGLKKDQ--AYSWIEVRSAKHVFVADDISHCEADKIYEMLG 579
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 178/336 (52%), Gaps = 12/336 (3%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHD- 71
H +K LT T+ +N+L+ +YS + K F ++P +N S+NT+++A ++ D
Sbjct: 55 HAHLVKTALTSHTLLSNRLVALYSSLPSPAAAVKAFYDLPHKNAHSYNTLLAALLRRPDT 114
Query: 72 LKQARSLFDSSP--HKDLVTYNSMLCGYINAEGYEADALKLFIEM---QSADEHIRMDEF 126
L A LFD+ P ++LV+YN+++ + G + +AL++ + + + MD F
Sbjct: 115 LPDAFRLFDTMPADSRNLVSYNTLMSSLAH-HGRQVEALRVVARLARDRFLGPGLAMDRF 173
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
TV S C + R++H +V + + + +++++ YSK R E+A +F+
Sbjct: 174 TVVSVATACAGIGAARPLREMHGAVVVSGMEFTVIMANAMLNAYSKARRVEDARHLFDQV 233
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
+ N ++ +M++ C+ ++ A++ F P+ D ++W LISG+ QNG+ + L+L
Sbjct: 234 SIRDN-VTWTSMISGYCQVKKLHEAVQVFDMMPD-KDRIAWTALISGHEQNGEEDTALEL 291
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP---FVSSGIVDV 303
F +M GV SAL AC L V KE+H ++L+ + S P F+ + +VD+
Sbjct: 292 FEQMLAKGVSPTPFVLVSALGACAKLGLVTRGKELHCFILRRNIGSVPFNIFIHNALVDM 351
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQG 339
Y KC +M A ++ R+ S +SM+ G+S G
Sbjct: 352 YSKCGDMMAAMAVFDWMPERDFISWNSMVTGFSHNG 387
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 134/280 (47%), Gaps = 50/280 (17%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + +G+ T I N +++ YSK + ++R LFD++ R+ +W ++IS + L
Sbjct: 195 HGAVVVSGMEFTVIMANAMLNAYSKARRVEDARHLFDQVSIRDNVTWTSMISGYCQVKKL 254
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+A +FD P KD + + +++ G+ G E AL+LF +M + + + F + S L
Sbjct: 255 HEAVQVFDMMPDKDRIAWTALISGH-EQNGEEDTALELFEQMLA--KGVSPTPFVLVSAL 311
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAV---SSLIDMYSKCRCYEEACRVFEGCTEE 189
C KL V G++LH F+++ + + F + ++L+DMYSKC
Sbjct: 312 GACAKLGLVTRGKELHCFILRRNIGSVPFNIFIHNALVDMYSKC---------------- 355
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
G+M A+ F PE D +SWN++++G+ NG ++ L +F
Sbjct: 356 ----------------GDMMAAMAVFDWMPE-RDFISWNSMVTGFSHNGLGKQSLAIFEE 398
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG 289
M GVR TF + L+AC HS ++ NG
Sbjct: 399 MLVAGVRPTHVTFLAVLTACS-----------HSGLVSNG 427
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 191/667 (28%), Positives = 322/667 (48%), Gaps = 99/667 (14%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L + + H AIKAG++ I L+ +YSK
Sbjct: 378 LHKGMQLHSHAIKAGMSADIILEGSLLDLYSK---------------------------- 409
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
C D++ A F + +++V +N ML Y + +D+ ++F +MQ E + ++
Sbjct: 410 CA---DVETAHKFFLXTETENIVLWNVMLVAYGQLDNL-SDSFEIFRQMQM--EGMIPNQ 463
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
FT S L C L + G Q+H ++KT + + S LIDMY+K
Sbjct: 464 FTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAK------------- 510
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
G++ +AL+ R PE +D VSW +I+GYVQ+ E L+
Sbjct: 511 -------------------YGQLALALRILRRLPE-DDVVSWTAMIAGYVQHDMFSEALQ 550
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
LF M G++++ FASA+SAC G+R ++ ++IH+ G ++ +++ ++ +Y
Sbjct: 551 LFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYA 610
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
+C G ++EA F+ + +KN + W +L SG
Sbjct: 611 RC-------------------------------GRIQEAYLAFEKIGDKNNISWNSLVSG 639
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
++ E + + E V + + A A A + G++IH+ +L+ G
Sbjct: 640 LAQSGYFEEALQVFVRMLRTEAEV-NMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDS 698
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
++++ ++L+ +Y+K G+++ A F + ER+++ +N MI Y+ HG +A+ LFEEM
Sbjct: 699 EREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMK 758
Query: 486 EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQL 545
GI P+ VTFV +LSA H G V+ G YF SM + + P+++HY C++DL GRA QL
Sbjct: 759 VCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQL 818
Query: 546 EKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVY 605
++A+E++K +P DA+I + L+ C +++N E+ A LL LE + A YV ++N+Y
Sbjct: 819 DRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIY 878
Query: 606 AAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFT 665
A W RK M+ + G SW+ V++ +H F GD HP TN IY +
Sbjct: 879 AVSRQWIHRDWSRKLMKDXGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLN 938
Query: 666 GELYEIA 672
EI
Sbjct: 939 RRTSEIG 945
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/506 (24%), Positives = 229/506 (45%), Gaps = 83/506 (16%)
Query: 48 FDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADA 107
FD P N +I K+ ++ A+ +F+ KD+VT+ +M+ G ++ G E +A
Sbjct: 191 FDSSP----LVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISG-LSQNGLEEEA 245
Query: 108 LKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLI 167
+ LF +M +++ I + ++S L+ K+ G QLH ++K + + + L+
Sbjct: 246 ILLFCDMHASE--IFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLV 303
Query: 168 DMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSW 227
+YS+ R A R+F D VS+
Sbjct: 304 ALYSRSRKLISAERIFSTMNSR---------------------------------DGVSY 330
Query: 228 NTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLK 287
N+LISG VQ G ++ L+LF +M + ++ + T AS LSAC + + ++HS +K
Sbjct: 331 NSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIK 390
Query: 288 NGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRH 347
G+ ++ + ++D+Y KC ++E A +
Sbjct: 391 AGMSADIILEGSLLDLYSKC-------------------------------ADVETAHKF 419
Query: 348 FDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAA 407
F +N+V+W + Y + N F++ + + EG++ + +L C A
Sbjct: 420 FLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQ-MQMEGMIPNQFTYPSILRTCTSLGA 478
Query: 408 LHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIAC 467
L+ G++IH ++++ G Q++ + S L+DMY+K G + A I + E D+V + MIA
Sbjct: 479 LYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAG 538
Query: 468 YAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK-----YFNSMTAD 522
Y H +A+ LFEEM +GI+ D + F + +SA ++ G++ Y AD
Sbjct: 539 YVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGAD 598
Query: 523 YKISPETDHYACMIDLYGRANQLEKA 548
I+ +I LY R ++++A
Sbjct: 599 LSINN------ALISLYARCGRIQEA 618
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 121/489 (24%), Positives = 219/489 (44%), Gaps = 69/489 (14%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N +++ +S L A +F + +D V+YNS++ G + +G+ AL+LF +MQ +
Sbjct: 300 NGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQ-QGFSDRALELFTKMQR--D 356
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
++ D TV S L+ C + + G QLH+ +K A SL+D+YSKC
Sbjct: 357 CLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKC------ 410
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
++E A K F+ E + V WN ++ Y Q +
Sbjct: 411 --------------------------ADVETAHK-FFLXTETENIVLWNVMLVAYGQLDN 443
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
+ ++F +M G+ N+ T+ S L C L + ++IH+ V+K G N +V S
Sbjct: 444 LSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSV 503
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
++D+Y K Y + L L+ +R L E +VV W
Sbjct: 504 LIDMYAK-----YGQLALALRILRR--------------------------LPEDDVVSW 532
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
TA+ +GYV+ L E + G+ D + + ACA AL G++IHA
Sbjct: 533 TAMIAGYVQHDMFSEALQLFEEMEYR-GIQFDNIGFASAISACAGIRALRQGQQIHAQSY 591
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
G D + + L+ +Y++CG + A + F+ +++ + +N +++ A G+ E+A+
Sbjct: 592 AAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQ 651
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
+F ML + + T+ + +SA +++ G++ +SM E + +I LY
Sbjct: 652 VFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQ-IHSMVLKTGYDSEREVSNSLISLY 710
Query: 540 GRANQLEKA 548
++ + A
Sbjct: 711 AKSGSISDA 719
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 171/387 (44%), Gaps = 40/387 (10%)
Query: 180 CRVFE-GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
CR+ + G E LI +++V R G+ A+K F + SWN +I +V
Sbjct: 82 CRISKSGFDGEPLLI--DSLVDNYFRHGDQHGAVKVF-DENSNRSVFSWNKMIHVFVAQK 138
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLR-NVKCAKEIHSWVLKNGLISNPFVS 297
+ LF RM G+ N +TFA L AC G K++HS G S+P V+
Sbjct: 139 SNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVA 198
Query: 298 SGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVV 357
+ ++D+Y K G +E A++ F+ + K++V
Sbjct: 199 NLLIDLYSK-------------------------------NGYIESAKKVFNCICMKDIV 227
Query: 358 VWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
W A+ SG + E L + E T ++ +L + +Q G+++H
Sbjct: 228 TWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQL-FELGEQLHCL 286
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
+++ G + + + LV +YS+ + AE IF RD V YN +I+ G ++A
Sbjct: 287 VIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRA 346
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID 537
+ LF +M +KPD +T ++LSA G++ G + +S +S + ++D
Sbjct: 347 LELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQ-LHSHAIKAGMSADIILEGSLLD 405
Query: 538 LYGRANQLEKAIEFMKSIPTEEDAVIL 564
LY + +E A +F + TE + ++L
Sbjct: 406 LYSKCADVETAHKFF--LXTETENIVL 430
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 72/173 (41%), Gaps = 6/173 (3%)
Query: 379 LSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYS 438
L F+ + GV ++ + LL C +L +H I + G + LI +LVD Y
Sbjct: 45 LMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYF 104
Query: 439 KCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVA 498
+ G+ A +F R + +N MI + + LF ML +GI P+ TF
Sbjct: 105 RHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAG 164
Query: 499 ILSAFRHCGSVEMGEKY---FNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
+L A C ++ Y +S T Y +IDLY + +E A
Sbjct: 165 VLKA---CVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESA 214
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 90/241 (37%), Gaps = 69/241 (28%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
N+K+ H +K G +N LI +Y+K + ++ + F++M ERNV SWN +I+
Sbjct: 680 NIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMIT 739
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
Y+ CG +AL+LF EM+ I +
Sbjct: 740 G------------------------YSQHGCG--------MEALRLFEEMKVCG--IMPN 765
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSND--ASGFAVSSLIDMYSKCRCYEEACRV 182
T L+ C H +VK D S F + L+ C
Sbjct: 766 HVTFVGVLSACS-----------HIGLVKEGLDYFESMFKIHDLVPKSEHYVCV------ 808
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
V+L+ R G+++ A++ P DA+ W TL+S V + + E
Sbjct: 809 -------VDLLG---------RAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEI 852
Query: 243 G 243
G
Sbjct: 853 G 853
>gi|357464703|ref|XP_003602633.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491681|gb|AES72884.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 180/540 (33%), Positives = 296/540 (54%), Gaps = 17/540 (3%)
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE 188
+S ++ CV ++ G+ LH+ ++KT+ F + LID+YSKC C E + F+
Sbjct: 82 SSLISNCVSAKSLKHGKALHSQLIKTALFFETFLANGLIDLYSKCGCKESIHKAFDDLPN 141
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
+ + N +++ ++G A K F P+ N VS+N+LISG ++ +E +K F
Sbjct: 142 KTTR-TWNTLLSFYSKKGVFNQAYKLFDEMPQRN-LVSYNSLISGLTRHEFHKEAVKFFR 199
Query: 249 RM--GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
M G G+ +E T S +S C L VK +++H G +N +++ ++D Y K
Sbjct: 200 EMQNGVGGLMLDEFTLVSLVSNCSCLDTVKWLRQVHGVATIVGFRTNLILNNALIDAYGK 259
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
C N + + +++ S +SM+V Y+ +++A + F+ + K V W AL SG+
Sbjct: 260 CGEPNSSFCLFRSMVEKDAVSWTSMVVTYTRASRIDDACKVFNEMPVKYTVSWAALISGF 319
Query: 367 VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMD 426
VK C ++ + + KEGV+ A V +L ACA +A + GK++H I+R G D
Sbjct: 320 VKNGRCYEALEVFHQMI-KEGVLPRAQTFVSVLDACASEALIGRGKQVHCQIIR-GRSSD 377
Query: 427 K----KLISTLVDMYSKCGNMTYAEIIFQNFIE-RDLVLYNVMIACYAHHGHEEKAILLF 481
+ + L+DMY+KCG+M AE +F+ I +D+V +N +I +A +G E ++ +F
Sbjct: 378 NLFNVYVFNALMDMYAKCGDMKSAENLFEMMIHVKDVVSWNTLITGFAQNGRGEDSLAVF 437
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGR 541
+ M+E I+P+ VTF+ +LSA H G V G + +SM Y + P+++HYA +IDL GR
Sbjct: 438 DRMIESNIEPNHVTFLGVLSACNHAGLVNAGLELLDSMERRYGVKPKSNHYALLIDLLGR 497
Query: 542 ANQLEKAIEFMKSIPTE--EDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYV 599
N+LE+A+ ++ +P E + G+ L CR++ N ELA +A E L LE N RYV
Sbjct: 498 KNRLEEAMCLIEKVPNEISNHIAMWGAVLGGCRVHGNLELARKAAEALFALEPENTGRYV 557
Query: 600 QLANVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
L+N+YAA G W++ RIR M RG+K + S + ++ H F D HP+ I
Sbjct: 558 MLSNIYAASGRWSDTNRIRNVMKERGLK--KEPAFSRIELKESRHEFVAKDKFHPQIGEI 615
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/407 (30%), Positives = 200/407 (49%), Gaps = 14/407 (3%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+LK H Q IK L T N LI +YSK K FD++P + +WNT++S
Sbjct: 93 SLKHGKALHSQLIKTALFFETFLANGLIDLYSKCGCKESIHKAFDDLPNKTTRTWNTLLS 152
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
K QA LFD P ++LV+YNS++ G E + +A+K F EMQ+ + +D
Sbjct: 153 FYSKKGVFNQAYKLFDEMPQRNLVSYNSLISGLTRHE-FHKEAVKFFREMQNGVGGLMLD 211
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
EFT+ S ++ C L V + RQ+H + ++LID Y KC + +F
Sbjct: 212 EFTLVSLVSNCSCLDTVKWLRQVHGVATIVGFRTNLILNNALIDAYGKCGEPNSSFCLFR 271
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
E+ + +S +MV R ++ A K F P + VSW LISG+V+NG E L
Sbjct: 272 SMVEK-DAVSWTSMVVTYTRASRIDDACKVFNEMP-VKYTVSWAALISGFVKNGRCYEAL 329
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF---VSSGIV 301
++F +M + GV TF S L AC + K++H +++ N F V + ++
Sbjct: 330 EVFHQMIKEGVLPRAQTFVSVLDACASEALIGRGKQVHCQIIRGRSSDNLFNVYVFNALM 389
Query: 302 DVYCKCENMNYAESML-LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
D+Y KC +M AE++ ++ V++ S +++I G++ G E++ FD + E N+
Sbjct: 390 DMYAKCGDMKSAENLFEMMIHVKDVVSWNTLITGFAQNGRGEDSLAVFDRMIESNIEPNH 449
Query: 361 ALFSGYVKAQNCEAL----FDLLSEFVTKEGVVTDA---LILVILLG 400
F G + A N L +LL + GV + +L+ LLG
Sbjct: 450 VTFLGVLSACNHAGLVNAGLELLDSMERRYGVKPKSNHYALLIDLLG 496
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 141/294 (47%), Gaps = 18/294 (6%)
Query: 262 FASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC---ENMNYAESMLL 318
F+S +S C +++K K +HS ++K L F+++G++D+Y KC E+++ A L
Sbjct: 81 FSSLISNCVSAKSLKHGKALHSQLIKTALFFETFLANGLIDLYSKCGCKESIHKAFDDLP 140
Query: 319 LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDL 378
K R + ++++ YS +G +A + FD + ++N+V + +L SG + + +
Sbjct: 141 NKTTR---TWNTLLSFYSKKGVFNQAYKLFDEMPQRNLVSYNSLISGLTRHEFHKEAVKF 197
Query: 379 LSEFVTK-EGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMY 437
E G++ D LV L+ C+ + +++H +G + + L + L+D Y
Sbjct: 198 FREMQNGVGGLMLDEFTLVSLVSNCSCLDTVKWLRQVHGVATIVGFRTNLILNNALIDAY 257
Query: 438 SKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFV 497
KCG + +F++ +E+D V + M+ Y + A +F EM K V++
Sbjct: 258 GKCGEPNSSFCLFRSMVEKDAVSWTSMVVTYTRASRIDDACKVFNEMPVKY----TVSWA 313
Query: 498 AILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID------LYGRANQL 545
A++S F G + F+ M + + P + ++D L GR Q+
Sbjct: 314 ALISGFVKNGRCYEALEVFHQMIKE-GVLPRAQTFVSVLDACASEALIGRGKQV 366
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 186/660 (28%), Positives = 319/660 (48%), Gaps = 99/660 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +KAG++ I L+ +Y K ++ E+ ++F NV WN ++ A + DL
Sbjct: 267 HSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDL 326
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
A + LF +M +A +R +EFT L
Sbjct: 327 --------------------------------AKSFDLFCQMVAAG--VRPNEFTYPCLL 352
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C + G Q+H +KT ++ + LIDMYSK ++A R+ E
Sbjct: 353 RTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVL------ 406
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
E D VSW ++I+GYVQ+ +E L+ F M
Sbjct: 407 ---------------------------EAKDVVSWTSMIAGYVQHEFCKEALETFKDMQL 439
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G+ + ASA+SAC G++ ++ ++IHS V +G ++ + + +V++Y +C
Sbjct: 440 FGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARC----- 494
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G +EA F+++ K+ + W + SG+ ++
Sbjct: 495 --------------------------GRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLY 528
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
E ++ + + + GV + V + A A A + GK+IHA +++ G + ++ +
Sbjct: 529 EEALEVFIK-MYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANA 587
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
L+ +Y KCG++ A++ F ER+ V +N +I + HG +A+ LF++M ++G+KP+
Sbjct: 588 LISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPN 647
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
VTF+ +L+A H G VE G YF SM++++ I P DHYAC++D+ GRA QL++A +F+
Sbjct: 648 DVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFV 707
Query: 553 KSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWA 612
+ +P +A++ + L+ CR+++N E+ A + LL LE ++ A YV L+N YA G WA
Sbjct: 708 EEMPVSANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAVTGKWA 767
Query: 613 EMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
+RK M+ + G SW+ V++ +H F VGD HP + IY LA L +I
Sbjct: 768 CRDHVRKMMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAHQIYKYLADLDDRLAKIG 827
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/546 (23%), Positives = 245/546 (44%), Gaps = 73/546 (13%)
Query: 7 KEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFS----WNTI 62
+EA+ + Q +G+ T + ++ +K L + R + ++ ++ S N +
Sbjct: 125 EEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNAL 184
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
I+ ++ L A +F P+ D VT+N+++ + E+ AL++F EM+ +
Sbjct: 185 IALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGES-ALEIFEEMRLSG--WT 241
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
D T+ S L C + ++ G+QLH++++K SL+D+Y KC EA +
Sbjct: 242 PDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEI 301
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
F + + + V WN ++ Y Q D +
Sbjct: 302 F---------------------------------KSGDRTNVVLWNLMLVAYGQISDLAK 328
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
LF +M GVR NE T+ L C + ++IH +K G S+ +VS ++D
Sbjct: 329 SFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLID 388
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
+Y K G +++ARR + L K+VV WT++
Sbjct: 389 MYSK-------------------------------YGWLDKARRILEVLEAKDVVSWTSM 417
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
+GYV+ + C+ + + + G+ D + L + ACA A+ G++IH+ + G
Sbjct: 418 IAGYVQHEFCKEALETFKD-MQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSG 476
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
D + + LV++Y++CG A +F+ +D + +N M++ +A G E+A+ +F
Sbjct: 477 YSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFI 536
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRA 542
+M + G+K + TFV+ +SA + ++ G K ++ + ET+ +I LYG+
Sbjct: 537 KMYQAGVKYNVFTFVSSISASANLADIKQG-KQIHATVIKTGCTSETEVANALISLYGKC 595
Query: 543 NQLEKA 548
+E A
Sbjct: 596 GSIEDA 601
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 174/369 (47%), Gaps = 38/369 (10%)
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
I+ N ++ ++G ++ A + F Q D VSW ++SGY +NG EE + L+ +M
Sbjct: 78 IAGNLLIDLYAKKGLVQRARRVF-EQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHC 136
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+GV + +S LSAC + + +H+ V K G S V + ++ +Y + +++
Sbjct: 137 SGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSL 196
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
AE R F + + V + L S + + N
Sbjct: 197 AE-------------------------------RVFSEMPYCDRVTFNTLISRHAQCGNG 225
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
E+ ++ E + G D + + LL ACA L+ GK++H+Y+L+ G+ D + +
Sbjct: 226 ESALEIFEE-MRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGS 284
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
L+D+Y KCG + A IF++ ++VL+N+M+ Y K+ LF +M+ G++P+
Sbjct: 285 LLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPN 344
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY--ACMIDLYGRANQLEKAIE 550
T+ +L + G + +GE+ K E+D Y +ID+Y + L+KA
Sbjct: 345 EFTYPCLLRTCTYAGEINLGEQIH---LLSIKTGFESDMYVSGVLIDMYSKYGWLDKARR 401
Query: 551 FMKSIPTEE 559
++ + ++
Sbjct: 402 ILEVLEAKD 410
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/454 (23%), Positives = 193/454 (42%), Gaps = 105/454 (23%)
Query: 4 LNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
+NL E + H+ +IK G + LI +YSK+ L ++R++ + + ++V SW
Sbjct: 361 INLGEQI--HLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSW---- 414
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
SM+ GY+ E + +AL+ F +MQ I
Sbjct: 415 ---------------------------TSMIAGYVQHE-FCKEALETFKDMQLFG--IWP 444
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
D + S ++ C + + G+Q+H+ + + A ++L+++Y++C +EA +F
Sbjct: 445 DNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLF 504
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
E E + I+ N MV SG+ Q+G EE
Sbjct: 505 EA-IEHKDKITWNGMV--------------------------------SGFAQSGLYEEA 531
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
L++F++M + GV++N TF S++SA L ++K K+IH+ V+K G S V++ ++ +
Sbjct: 532 LEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALISL 591
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK----NVVVW 359
Y KC ++ A+ RN S +++I S G EA FD + ++ N V +
Sbjct: 592 YGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTF 651
Query: 360 TALFS------------GYVKAQNCE--------------------ALFDLLSEFVTKEG 387
+ + GY K+ + E D +FV +
Sbjct: 652 IGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMP 711
Query: 388 VVTDALILVILLGACALQAALHPGKEIHAYILRM 421
V +A++ LL AC + + G+ Y+L +
Sbjct: 712 VSANAMVWRTLLSACRVHKNIEIGELAAKYLLEL 745
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 144/332 (43%), Gaps = 34/332 (10%)
Query: 224 AVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCG-LRNVKCAKEIH 282
A S N ++G++ + D E+ L LF FA AL C G +++ IH
Sbjct: 6 AASLNKSLTGFLAHEDPEKLLSLFAAKVRQCRGLGSVDFACALRECRGSVKHWPLVPVIH 65
Query: 283 SWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNME 342
+ + GL + + ++D+Y K + A + R++ S +M+ GY+ G E
Sbjct: 66 AKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGE 125
Query: 343 EARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGAC 402
EA G +C GVV +L +L AC
Sbjct: 126 EA-------------------VGLYHQMHC-------------SGVVPTPYVLSSVLSAC 153
Query: 403 ALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYN 462
A G+ +HA + + G + + + L+ +Y + G+++ AE +F D V +N
Sbjct: 154 TKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFN 213
Query: 463 VMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTAD 522
+I+ +A G+ E A+ +FEEM G PD VT ++L+A G + G K +S
Sbjct: 214 TLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKG-KQLHSYLLK 272
Query: 523 YKISPETDHYACMIDLYGRANQLEKAIEFMKS 554
+SP+ ++DLY + + +A+E KS
Sbjct: 273 AGMSPDYIIEGSLLDLYVKCGVIVEALEIFKS 304
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 1/143 (0%)
Query: 414 IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH 473
IHA + G+ D+ + L+D+Y+K G + A +F+ RD V + M++ YA +G
Sbjct: 64 IHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGL 123
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA 533
E+A+ L+ +M G+ P ++LSA E G + ++ ET
Sbjct: 124 GEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQG-RLVHAQVYKQGSCSETVVGN 182
Query: 534 CMIDLYGRANQLEKAIEFMKSIP 556
+I LY R L A +P
Sbjct: 183 ALIALYLRFGSLSLAERVFSEMP 205
>gi|297824009|ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
lyrata]
gi|297325726|gb|EFH56146.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
lyrata]
Length = 1359
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 189/651 (29%), Positives = 309/651 (47%), Gaps = 101/651 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K GL + L+ +YSK ++ E+ +F + ++ + WN +++A ++
Sbjct: 794 HCDVVKMGLDNDPYVSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVE---- 849
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
N GY A L F+ +S + D FT+++ +
Sbjct: 850 --------------------------NDNGYSALELFGFMRQKS----VLPDSFTLSNVI 879
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C +G+ +HA + K ++ S+L+ +YSKC C +A VF+ E+
Sbjct: 880 SCCSMFGLYDYGKSVHAELFKRPIQSTPAIESALLTLYSKCGCDTDAYLVFKSMEEK--- 936
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM-- 250
D V+W +LISG +NG +E LK+F M
Sbjct: 937 ------------------------------DMVAWGSLISGLCKNGKFKEALKVFGDMKD 966
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
++ ++ + S ++AC GL + ++H ++K G + N FV S ++D+Y KC
Sbjct: 967 DDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIKTGQVLNVFVGSSLIDLYSKC--- 1023
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
G E A + F S+ +N+V W ++ S Y +
Sbjct: 1024 ----------------------------GLPEMALKVFTSMRPENIVAWNSMISCYSRNN 1055
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
E +L + + +G+ D++ + +L A + A+L GK +H Y LR+G+ D L
Sbjct: 1056 LPELSIELFN-LMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLK 1114
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+ L+DMY KCG YAE IF+ + L+ +N+MI Y HG A+ LF+E+ + G
Sbjct: 1115 NALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCRTALSLFDELKKAGET 1174
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
PD VTF++++SA H G VE G+ +F M DY I P+ +HYA M+DL GRA +LE+A
Sbjct: 1175 PDDVTFLSLISACNHSGFVEEGKNFFEIMKQDYGIEPKMEHYANMVDLLGRAGRLEEAYS 1234
Query: 551 FMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGN 610
F+K++PTE D+ I L+ R + N EL + EKLLR+E + YVQL N+Y G
Sbjct: 1235 FIKAMPTEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGL 1294
Query: 611 WAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
E ++ +M+ + GCSW+ V ++F G S P I+ VL
Sbjct: 1295 KNEAAKLLGEMKERGLQKQPGCSWIEVSDISNVFFSGGSSSPIKAEIFKVL 1345
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 204/455 (44%), Gaps = 69/455 (15%)
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR 145
++V +N M+ G+ +E E+ +L+L+ M + +++ + T L C + N FGR
Sbjct: 735 NVVLWNVMIVGFGGSEICES-SLELY--MLAKSNSVKLVSTSFTGALGACSQSENSAFGR 791
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
Q+H +VK D + +SL+ MYSKC EA VF +C +
Sbjct: 792 QIHCDVVKMGLDNDPYVSTSLLSMYSKCGMVGEAETVF-----------------SCVVD 834
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASA 265
+E+ WN +++ YV+N + L+LF M + V + T ++
Sbjct: 835 KRLEI----------------WNAMVAAYVENDNGYSALELFGFMRQKSVLPDSFTLSNV 878
Query: 266 LSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNS 325
+S C K +H+ + K + S P + S ++ +Y KC
Sbjct: 879 ISCCSMFGLYDYGKSVHAELFKRPIQSTPAIESALLTLYSKC------------------ 920
Query: 326 FSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV-T 384
G +A F S+ EK++V W +L SG K + + +
Sbjct: 921 -------------GCDTDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDD 967
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
+ + D+ I+ ++ ACA AL G ++H +++ G ++ + S+L+D+YSKCG
Sbjct: 968 DDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIKTGQVLNVFVGSSLIDLYSKCGLPE 1027
Query: 445 YAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR 504
A +F + ++V +N MI+CY+ + E +I LF ML +GI PD+V+ ++L A
Sbjct: 1028 MALKVFTSMRPENIVAWNSMISCYSRNNLPELSIELFNLMLSQGIFPDSVSITSVLVAIS 1087
Query: 505 HCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
S+ G K + T I +T +ID+Y
Sbjct: 1088 STASLLKG-KSLHGYTLRLGIPSDTHLKNALIDMY 1121
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 112/453 (24%), Positives = 198/453 (43%), Gaps = 70/453 (15%)
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
FT S L C L N+ G+ +H ++ F +SL++MY KC + A +VF+G
Sbjct: 562 FTFPSLLKACSSLTNLSSGKTIHGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 621
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN--DAVSWNTLISGYVQNGDAEEG 243
W Q ++ D N++I GY + +EG
Sbjct: 622 ------------------------------WSQSGVSARDVTVCNSMIDGYFKFRRFKEG 651
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVK--CAKEIHSWVLKNGLISNPFVSSGIV 301
+ F RM GVR + + + +S C N + K+IH ++L+N L + F+ + ++
Sbjct: 652 VGCFRRMLVLGVRPDAFSLSIVVSVLCKEGNFRREDGKQIHGYMLRNSLDGDSFLKTALI 711
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK-NVVVWT 360
D+Y K F +S+ +A R F + +K NVV+W
Sbjct: 712 DMYFK-------------------FGLST------------DAWRVFVEIEDKSNVVLWN 740
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
+ G+ ++ CE+ +L V + LGAC+ G++IH +++
Sbjct: 741 VMIVGFGGSEICESSLELYM-LAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVK 799
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
MG+ D + ++L+ MYSKCG + AE +F +++ L ++N M+A Y + + A+ L
Sbjct: 800 MGLDNDPYVSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALEL 859
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
F M +K + PD+ T ++S G + G K ++ I + ++ LY
Sbjct: 860 FGFMRQKSVLPDSFTLSNVISCCSMFGLYDYG-KSVHAELFKRPIQSTPAIESALLTLYS 918
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLN-VCR 572
+ A KS+ E+D V GS ++ +C+
Sbjct: 919 KCGCDTDAYLVFKSM-EEKDMVAWGSLISGLCK 950
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 101/264 (38%), Gaps = 67/264 (25%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L L H IK G L + LI +YSK L + K+F M N+ +WN++IS
Sbjct: 991 LSFGLQVHGSMIKTGQVLNVFVGSSLIDLYSKCGLPEMALKVFTSMRPENIVAWNSMIS- 1049
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
C ++L P + +N ML + I D
Sbjct: 1050 CYSRNNL----------PELSIELFNLML-----------------------SQGIFPDS 1076
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
++TS L ++ G+ LH + ++ + ++LIDMY KC + A +F+
Sbjct: 1077 VSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFK- 1135
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
+M K+ ++WN +I GY +GD L
Sbjct: 1136 -----------------------KMQHKSL---------ITWNLMIYGYGSHGDCRTALS 1163
Query: 246 LFVRMGENGVRWNEHTFASALSAC 269
LF + + G ++ TF S +SAC
Sbjct: 1164 LFDELKKAGETPDDVTFLSLISAC 1187
>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
Length = 1026
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 193/618 (31%), Positives = 306/618 (49%), Gaps = 70/618 (11%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
N+F N ++ KS L+ AR F+ ++D V++N ++ GY+ E E +A LF M
Sbjct: 462 NLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEED-EVEAFHLFRRM 520
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
I DE ++ S L+ C + + G+Q+H VKT + ++ SSLIDMY+KC
Sbjct: 521 NLLG--ILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCG 578
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
+ A ++ C E +++S NA LI+GY
Sbjct: 579 AIDSAHKIL-ACMPERSVVSMNA--------------------------------LIAGY 605
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL-ISN 293
Q + E+ + LF M G+ E TFAS L AC + + ++IHS +LK GL + +
Sbjct: 606 AQI-NLEQAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDD 664
Query: 294 PFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
F+ ++ +Y NS + V +S N
Sbjct: 665 EFLGVSLLGMYM------------------NSLRTTDASVLFSEFSN------------P 694
Query: 354 KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
K+ VVWTA+ SG + +C + L + + V+ D V L ACA+ +++ G E
Sbjct: 695 KSAVVWTAMISG-LSQNDCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGTE 753
Query: 414 IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFI-ERDLVLYNVMIACYAHHG 472
H+ I G D+ S LVDMY+KCG++ + +F+ ++D++ +N MI +A +G
Sbjct: 754 THSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVGFAKNG 813
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
+ E A+ +F+EM + + PD VTF+ +L+A H G V G F+ M Y + P DH
Sbjct: 814 YAEDALRVFDEMKQSHVTPDDVTFLGVLTACSHSGRVSEGRLIFDMMVNLYGMQPRADHC 873
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
ACM+DL GR L++A EF+ + E DA + + L CR++ + +A EKL+ LE
Sbjct: 874 ACMVDLLGRWGSLKEAEEFINKLNFEPDAKVWATMLGACRIHGDDIRGQQAAEKLIELEP 933
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
N + YV L+N+YAA GNW E+ +R++MR + GCSW+ V E ++F GD SH
Sbjct: 934 QNSSPYVLLSNIYAASGNWDEVNTLRREMREKGVKKLPGCSWIVVGQETNMFVAGDKSHH 993
Query: 653 KTNAIYSVLAIFTGELYE 670
+ I ++L T + E
Sbjct: 994 SASEIDAILKDLTPLMRE 1011
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 154/592 (26%), Positives = 256/592 (43%), Gaps = 116/592 (19%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN------------ 60
H +K G + LI +Y+K N L ++R +FD E + SW
Sbjct: 183 HCNVVKMGFESISYCEGALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLP 242
Query: 61 -----------------------TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGY 97
T+I+A + L A LF P++++V +N M+ G+
Sbjct: 243 EEAVKVFQEMEKVGQEPDQVAFVTVINAYVDLGRLDNASDLFSRMPNRNVVAWNLMISGH 302
Query: 98 INAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSND 157
GY +A++ F M+ A I+ T+ S L+ L + FG +HA +K
Sbjct: 303 AKG-GYGVEAIEFFQNMRKAG--IKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLH 359
Query: 158 ASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWR 217
++ + SSL+ MY+KC E A +VF+ E+
Sbjct: 360 SNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQ---------------------------- 391
Query: 218 QPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKC 277
+ V WN ++ GYVQNG A E ++LF M G ++ T++S LSAC L+ +
Sbjct: 392 -----NVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDL 446
Query: 278 AKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSL 337
++HS ++KN SN FV + +VD+Y K
Sbjct: 447 GHQLHSVIIKNKFASNLFVGNALVDMYAK------------------------------- 475
Query: 338 QGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVI 397
G +E+AR+ F+ + ++ V W + GYV+ ++ F L + G++ D + L
Sbjct: 476 SGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRR-MNLLGILPDEVSLAS 534
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD 457
+L ACA L GK++H ++ G + S+L+DMY+KCG + A I ER
Sbjct: 535 ILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERS 594
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFN 517
+V N +IA YA + E+A+ LF +ML +GI +TF ++L A + +G + +
Sbjct: 595 VVSMNALIAGYAQI-NLEQAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHS 653
Query: 518 SMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLN 569
+ K+ + D + L G +M S+ T + +V+ F N
Sbjct: 654 LI---LKMGLQLDDEFLGVSLLGM---------YMNSLRTTDASVLFSEFSN 693
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 166/606 (27%), Positives = 262/606 (43%), Gaps = 106/606 (17%)
Query: 16 AIKAGLTLTTITTNQLIHIYSKHNLLRESRK-----LFDEMPER-NVFS----------- 58
AI G + T I+ + N L++S++ LFDE+P+R + FS
Sbjct: 27 AIPNGSNHPSHTLKPRIYTHILQNCLQKSKQVKTHSLFDEIPQRLSQFSTTNKIIHAQSL 86
Query: 59 ----W------NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADAL 108
W N I+ K D+ A F KD++ +NS+L + + +G+ +
Sbjct: 87 KLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMH-SKQGFPHLVV 145
Query: 109 KLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLID 168
K F + ++ + +EFT L+ C +L V GRQ+H +VK ++ + +LI
Sbjct: 146 KYFGLLWNSG--VWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGALIG 203
Query: 169 MYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFW------------ 216
MY+KC +A +F+G E++ +S +M+ + G E A+K F
Sbjct: 204 MYAKCNFLTDARSIFDGAV-ELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQV 262
Query: 217 -----------------------RQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGEN 253
R P N V+WN +ISG+ + G E ++ F M +
Sbjct: 263 AFVTVINAYVDLGRLDNASDLFSRMPNRN-VVAWNLMISGHAKGGYGVEAIEFFQNMRKA 321
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA 313
G++ T S LSA L + +H+ LK GL SN +V S +V +Y KC
Sbjct: 322 GIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKC------ 375
Query: 314 ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE 373
G ME A++ FD+L E+NVV+W A+ GYV+
Sbjct: 376 -------------------------GKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYAN 410
Query: 374 ALFDLLSEFVTKE-GVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
+ +L F K G D +L ACA L G ++H+ I++ + + +
Sbjct: 411 EVMELF--FNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNA 468
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
LVDMY+K G + A F+ RD V +NV+I Y E +A LF M GI PD
Sbjct: 469 LVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPD 528
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY--ACMIDLYGRANQLEKAIE 550
V+ +ILSA C SV E+ K ET Y + +ID+Y + ++ A +
Sbjct: 529 EVSLASILSA---CASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHK 585
Query: 551 FMKSIP 556
+ +P
Sbjct: 586 ILACMP 591
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 146/567 (25%), Positives = 257/567 (45%), Gaps = 107/567 (18%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L L+ H +A+K GL + L+ +Y+K + ++K+FD + E+NV W
Sbjct: 343 LDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLW------ 396
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
N+ML GY+ GY + ++LF M+S D+
Sbjct: 397 -------------------------NAMLGGYVQ-NGYANEVMELFFNMKSCG--FYPDD 428
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
FT +S L+ C L + G QLH+ ++K ++ F ++L+DMY+K E+A + FE
Sbjct: 429 FTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFE- 487
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
LI D VSWN +I GYVQ D E
Sbjct: 488 ------LIRN--------------------------RDNVSWNVIIVGYVQEEDEVEAFH 515
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
LF RM G+ +E + AS LSAC +R ++ K++H +K G + + S ++D+Y
Sbjct: 516 LFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYA 575
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
KC ++ A +L R+ S++++I GY+ Q N+E+A F ++++V
Sbjct: 576 KCGAIDSAHKILACMPERSVVSMNALIAGYA-QINLEQAVNLF-----RDMLV------- 622
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
EG+ + + LL AC Q L+ G++IH+ IL+MG+Q+
Sbjct: 623 --------------------EGINSTEITFASLLDACHEQQKLNLGRQIHSLILKMGLQL 662
Query: 426 DKKLIS-TLVDMYSKCGNMTYAEIIFQNFI-ERDLVLYNVMIACYAHHGHEEKAILLFEE 483
D + + +L+ MY T A ++F F + V++ MI+ + + A+ L++E
Sbjct: 663 DDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQNDCSVVALQLYKE 722
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY--ACMIDLYGR 541
M + PD TFV SA R C V + + + + ++D + ++D+Y +
Sbjct: 723 MRSCNVLPDQATFV---SALRACAVVSSIKDGTETHSLIFHTGFDSDELTSSALVDMYAK 779
Query: 542 ANQLEKAIEFMKSIPTEEDAVILGSFL 568
++ +++ K + ++D + S +
Sbjct: 780 CGDVKSSMQVFKEMSRKKDVISWNSMI 806
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 125/273 (45%), Gaps = 43/273 (15%)
Query: 4 LNLKEALICHVQAIKAGLTLTTITTNQLI---HIYSKHNLLRESRKLFDEMPER--NVFS 58
+NL++A+ + G+ T IT L+ H K NL R+ L +M + + F
Sbjct: 608 INLEQAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFL 667
Query: 59 WNTIISACIKSHDLKQARSLFD--SSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQS 116
+++ + S A LF S+P K V + +M+ G ++ AL+L+ EM+S
Sbjct: 668 GVSLLGMYMNSLRTTDASVLFSEFSNP-KSAVVWTAMISG-LSQNDCSVVALQLYKEMRS 725
Query: 117 ADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCY 176
+ + D+ T S L C + ++ G + H+ + T D+ S+L+DMY+KC
Sbjct: 726 CN--VLPDQATFVSALRACAVVSSIKDGTETHSLIFHTGFDSDELTSSALVDMYAKCGDV 783
Query: 177 EEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQ 236
+ + +VF+ + + ++IS N+M+ G+ +
Sbjct: 784 KSSMQVFKEMSRKKDVISWNSMIV--------------------------------GFAK 811
Query: 237 NGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
NG AE+ L++F M ++ V ++ TF L+AC
Sbjct: 812 NGYAEDALRVFDEMKQSHVTPDDVTFLGVLTAC 844
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 192/623 (30%), Positives = 307/623 (49%), Gaps = 84/623 (13%)
Query: 57 FSWNTIISACI-----KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLF 111
F WN ++A + + ARSLFD P +D+ ++N+M+ G I G A AL +
Sbjct: 246 FQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQ-NGNAAQALDVL 304
Query: 112 IEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYS 171
EM+ E I+M+ TV S L +C +L ++ +H +++K + F ++LI+MY+
Sbjct: 305 DEMRL--EGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYA 362
Query: 172 KCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLI 231
K G +E A K F +Q + D VSWN++I
Sbjct: 363 KF--------------------------------GNLEDARKAF-QQMFITDVVSWNSII 389
Query: 232 SGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG-L 290
+ Y QN D FV+M NG + + T S S R+ K ++ +H ++++ G L
Sbjct: 390 AAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWL 449
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
+ + + + +VD+Y K G ++ A + F+
Sbjct: 450 MEDVVIGNAVVDMYAKL-------------------------------GLLDSAHKVFEI 478
Query: 351 LTEKNVVVWTALFSGYVKAQNCEA-----LFDLLSEFVTKEGVVTDALILVILLGACALQ 405
+ K+V+ W L +GY AQN A ++ ++ E KE ++ + V +L A A
Sbjct: 479 ILVKDVISWNTLITGY--AQNGLASEAIEVYKMMEE--CKE-IIPNQGTWVSILPAYAHV 533
Query: 406 AALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMI 465
AL G IH +++ + +D + + L+D+Y KCG + A +F + V +N +I
Sbjct: 534 GALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAII 593
Query: 466 ACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKI 525
+C+ HGH EK + LF EML++G+KPD VTFV++LSA H G VE G+ F M +Y I
Sbjct: 594 SCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQ-EYGI 652
Query: 526 SPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEE 585
P HY CM+DL GRA LE A F+K +P + DA I G+ L CR++ N EL A +
Sbjct: 653 KPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASD 712
Query: 586 KLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFT 645
+L ++ N YV L+N+YA G W + ++R R + G S + V ++ +F
Sbjct: 713 RLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFY 772
Query: 646 VGDVSHPKTNAIYSVLAIFTGEL 668
G+ SHPK IY L + T ++
Sbjct: 773 TGNQSHPKCKEIYEELRVLTAKM 795
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 127/557 (22%), Positives = 226/557 (40%), Gaps = 138/557 (24%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
++ A++ H+ IK GL +N LI++Y+K L ++RK F +M +V SWN+II+
Sbjct: 331 DISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIA 390
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
A ++ D + A G+ F++MQ + D
Sbjct: 391 AYEQNDDP-------------------------VTAHGF-------FVKMQL--NGFQPD 416
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV-SSLIDMYSKCRCYEEACRVF 183
T+ S ++ + + R +H F+++ + ++++DMY+K + A +VF
Sbjct: 417 LLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVF 476
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
E+ L+ D +SWNTLI+GY QNG A E
Sbjct: 477 -----EIILV----------------------------KDVISWNTLITGYAQNGLASEA 503
Query: 244 LKLFVRMGE-NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
++++ M E + N+ T+ S L A + ++ IH V+K L + FV++ ++D
Sbjct: 504 IEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLID 563
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
VY KC G + +A F + +++ V W A+
Sbjct: 564 VYGKC-------------------------------GRLVDAMSLFYQVPQESSVTWNAI 592
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
S + + E L E + EGV D + V LL AC+ + GK + G
Sbjct: 593 ISCHGIHGHAEKTLKLFGEML-DEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYG 651
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
++ K +VD+ + G Y E+ + FI +D+ L
Sbjct: 652 IKPSLKHYGCMVDLLGRAG---YLEMAY-GFI-KDMPL---------------------- 684
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRA 542
+PDA + A+L A R G++E+G+ F S S +Y + ++Y
Sbjct: 685 -------QPDASIWGALLGACRIHGNIELGK--FASDRLFEVDSKNVGYYVLLSNIYANV 735
Query: 543 NQLEKAIEFMKSIPTEE 559
+ E ++ ++S+ E
Sbjct: 736 GKWE-GVDKVRSLARER 751
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 60/105 (57%), Gaps = 6/105 (5%)
Query: 412 KEIHAYILRMGVQMDKKLIST-LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
K +HA ++ G ++ IST LV++Y+ G+++ + F ++D+ +N MI+ Y H
Sbjct: 136 KCLHALLVVAG-KVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVH 194
Query: 471 HGHEEKAILLFEE-MLEKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
+GH +AI F + +L I+PD TF +L A CG++ G +
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKA---CGTLVDGRR 236
>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15130
gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 203/673 (30%), Positives = 321/673 (47%), Gaps = 113/673 (16%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K+G L IT+N LI +Y K + K+FD MPERNV SW+ ++S + + DL
Sbjct: 29 HCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDL 88
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
K + SLF + + I +EFT ++ L
Sbjct: 89 KGSLSLFS----------------------------------EMGRQGIYPNEFTFSTNL 114
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C L + G Q+H F +K + +SL+DMYSKC EA +VF + +L
Sbjct: 115 KACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDR-SL 173
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
IS NAM+A G AL TF G +Q + +E
Sbjct: 174 ISWNAMIAGFVHAGYGSKALDTF-----------------GMMQEANIKE---------- 206
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL--ISNPFVSSGIVDVYCKCENM 310
R +E T S L AC + K+IH +++++G S+ ++ +VD+Y KC
Sbjct: 207 ---RPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKC--- 260
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
G + AR+ FD + EK ++ W++L GY AQ
Sbjct: 261 ----------------------------GYLFSARKAFDQIKEKTMISWSSLILGY--AQ 290
Query: 371 NCE-----ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
E LF L E ++ D+ L ++G A A L GK++ A +++ +
Sbjct: 291 EGEFVEAMGLFKRLQELNSQ----IDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGL 346
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
+ +++++VDMY KCG + AE F +D++ + V+I Y HG +K++ +F EML
Sbjct: 347 ETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEML 406
Query: 486 EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQL 545
I+PD V ++A+LSA H G ++ GE+ F+ + + I P +HYAC++DL GRA +L
Sbjct: 407 RHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRL 466
Query: 546 EKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVY 605
++A + ++P + + I + L++CR++ + EL E + LLR++ N A YV ++N+Y
Sbjct: 467 KEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLY 526
Query: 606 AAEGNWAEMGRIRK--QMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAI 663
G W E G R+ ++G+K + AG SWV +E E+H F G+ SHP T I L
Sbjct: 527 GQAGYWNEQGNARELGNIKGLK--KEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKE 584
Query: 664 FTGELYEIAGAFY 676
L E G Y
Sbjct: 585 AERRLREELGYVY 597
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 113/426 (26%), Positives = 187/426 (43%), Gaps = 72/426 (16%)
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
+ S L +C + G Q+H +++K+ + + + LIDMY KCR
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCR------------- 55
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
E MA K F PE N VSW+ L+SG+V NGD + L LF
Sbjct: 56 -------------------EPLMAYKVFDSMPERN-VVSWSALMSGHVLNGDLKGSLSLF 95
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
MG G+ NE TF++ L AC L ++ +IH + LK G V + +VD+Y KC
Sbjct: 96 SEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKC 155
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
+N EA + F + +++++ W A+ +G+V
Sbjct: 156 GRIN-------------------------------EAEKVFRRIVDRSLISWNAMIAGFV 184
Query: 368 KAQ-NCEAL--FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
A +AL F ++ E KE D L LL AC+ ++ GK+IH +++R G
Sbjct: 185 HAGYGSKALDTFGMMQEANIKE--RPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFH 242
Query: 425 MDKK--LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
+ +LVD+Y KCG + A F E+ ++ ++ +I YA G +A+ LF+
Sbjct: 243 CPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFK 302
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRA 542
+ E + D+ +I+ F + G K ++ ET ++D+Y +
Sbjct: 303 RLQELNSQIDSFALSSIIGVFADFALLRQG-KQMQALAVKLPSGLETSVLNSVVDMYLKC 361
Query: 543 NQLEKA 548
+++A
Sbjct: 362 GLVDEA 367
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 117/544 (21%), Positives = 216/544 (39%), Gaps = 142/544 (26%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L++ L H +K G + N L+ +YSK + E+ K+F + +R++ SW
Sbjct: 123 LEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISW------ 176
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
N+M+ G+++A GY + AL F MQ A+ R DE
Sbjct: 177 -------------------------NAMIAGFVHA-GYGSKALDTFGMMQEANIKERPDE 210
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSN--DASGFAVSSLIDMYSKCRCYEEACRVF 183
FT+TS L C + G+Q+H F+V++ +S SL+D+Y KC A + F
Sbjct: 211 FTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAF 270
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN---DAVSWNTLISGYVQNGDA 240
+ E+ +IS ++++ +EGE A+ F R ELN D+ + +++I +
Sbjct: 271 DQIKEK-TMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALL 329
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
+G ++ AL+ VK + + VL + +
Sbjct: 330 RQGKQM-----------------QALA-------VKLPSGLETSVLNS-----------V 354
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
VD+Y KC G ++EA + F + K+V+ WT
Sbjct: 355 VDMYLKC-------------------------------GLVDEAEKCFAEMQLKDVISWT 383
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
+ +GY K + + E + + + D + + +L AC+ + G+E+ + +L
Sbjct: 384 VVITGYGKHGLGKKSVRIFYEML-RHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLE 442
Query: 421 M-GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
G++ + + +VD+ + G + A+ +
Sbjct: 443 THGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTM-------------------------- 476
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
IKP+ + +LS R G +E+G++ + +P +Y M +LY
Sbjct: 477 --------PIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPA--NYVMMSNLY 526
Query: 540 GRAN 543
G+A
Sbjct: 527 GQAG 530
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 172/545 (31%), Positives = 275/545 (50%), Gaps = 70/545 (12%)
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
+ S L C +V GR +H VK ++L+DMY+KC + A VF+
Sbjct: 1 MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFD--- 57
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
M+++T V+W +LI+ Y + G ++E ++LF
Sbjct: 58 ---------------------LMSVRT---------VVTWTSLIAAYAREGLSDEAIRLF 87
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
M GV + T + L AC +++ K++H+++ +N + SN FV + ++D+Y KC
Sbjct: 88 HEMDREGVSPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKC 147
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
G+ME+A F + K+++ W + GY
Sbjct: 148 -------------------------------GSMEDANSVFLEMPVKDIISWNTMIGGYS 176
Query: 368 KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDK 427
K L + V + + D L +L ACA A+L GKE+H +ILR G D+
Sbjct: 177 KNSLPNEALSLFGDMVLE--MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQ 234
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
++ + LVDMY KCG A ++F +DL+ + VMIA Y HG AI F EM +
Sbjct: 235 QVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQA 294
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEK 547
GI+PD V+F++IL A H G ++ G ++FN M + + P+ +HYAC++DL R+ +L
Sbjct: 295 GIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAM 354
Query: 548 AIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAA 607
A +F+KS+P E DA I G+ L+ CR++ + +LA + E + LE N YV LAN YA
Sbjct: 355 AYKFIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAE 414
Query: 608 EGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFT 665
W E+ ++R+++ RG+K N GCSW+ V+ ++HIF G+ SHP+ I +L
Sbjct: 415 AEKWEEVKKLRQKIGRRGLKKN--PGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLR 472
Query: 666 GELYE 670
++ E
Sbjct: 473 SKMKE 477
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 111/467 (23%), Positives = 192/467 (41%), Gaps = 113/467 (24%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +KA + T N L+ +Y+K +L + +FD M R V +W ++I+A
Sbjct: 21 HGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRTVVTWTSLIAA------- 73
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
AR EG +A++LF EM E + D FT+T+ L
Sbjct: 74 -YAR------------------------EGLSDEAIRLFHEMDR--EGVSPDIFTITTVL 106
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C ++ G+ +H ++ + ++ F ++L+DMY+KC E+A VF
Sbjct: 107 HACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVF--------- 157
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF----V 248
+EM +K D +SWNT+I GY +N E L LF +
Sbjct: 158 ---------------LEMPVK---------DIISWNTMIGGYSKNSLPNEALSLFGDMVL 193
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
M +G T A L AC L ++ KE+H +L+NG S+ V++ +VD+Y KC
Sbjct: 194 EMKPDGT-----TLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCG 248
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
A + + ++ + + MI GY + G A F+ + +
Sbjct: 249 VPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQA-------------- 294
Query: 369 AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK 428
G+ D + + +L AC+ L G +++ + K
Sbjct: 295 ------------------GIEPDEVSFISILYACSHSGLLDEGWRFFN-VMQDECNVKPK 335
Query: 429 L--ISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMIA-CYAHH 471
L + +VD+ ++ G + A + I IE D ++ +++ C HH
Sbjct: 336 LEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSGCRIHH 382
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 196/614 (31%), Positives = 309/614 (50%), Gaps = 61/614 (9%)
Query: 81 SSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLN 140
+SPH Y SML Y+ A+ Y L I+ S IR E+
Sbjct: 192 NSPHFAFTLYKSMLSNYLGADNY---TYPLLIQACS----IRRSEWE------------- 231
Query: 141 VGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVA 200
+Q+H ++K D+ + ++LI+ +S C +ACRVF + ++ +S N+++A
Sbjct: 232 ---AKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNE-SSVLDSVSWNSILA 287
Query: 201 ACCREGEMEMALKTFWRQPELN------------------------------DAVSWNTL 230
G +E A + + PE + D V+W+ L
Sbjct: 288 GYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSAL 347
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL 290
I+ + QN EE ++ FV M + GV +E SALSAC L V K IHS LK G
Sbjct: 348 IACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGT 407
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
S + + ++ +Y KC ++ A + + + S +SMI GY ++ A+ FDS
Sbjct: 408 ESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDS 467
Query: 351 LTEKNVVVWTALFSGYVKAQNCEALFD---LLSEFVTKEGVVTDALILVILLGACALQAA 407
+ EK+VV W+++ SGY AQN LFD L + + G D LV ++ ACA AA
Sbjct: 468 MPEKDVVSWSSMISGY--AQN--DLFDETLALFQEMQMSGFKPDETTLVSVISACARLAA 523
Query: 408 LHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIAC 467
L GK +HAYI R G+ ++ L +TL+DMY KCG + A +F IE+ + +N +I
Sbjct: 524 LEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILG 583
Query: 468 YAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISP 527
A +G E ++ +F M + + P+ +TF+ +L A RH G V+ G+ +F SM D+KI P
Sbjct: 584 LAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQP 643
Query: 528 ETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKL 587
HY CM+DL GRA +L++A E + +P D G+ L C+ + ++E+ KL
Sbjct: 644 NVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKL 703
Query: 588 LRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVG 647
+ L+ ++ +V L+N+YA++G W ++ IR M + + GCS + IH F G
Sbjct: 704 IELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAG 763
Query: 648 DVSHPKTNAIYSVL 661
D +HP +AI +L
Sbjct: 764 DKTHPDMDAIEDML 777
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 124/482 (25%), Positives = 229/482 (47%), Gaps = 41/482 (8%)
Query: 22 TLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDS 81
L +++ N ++ Y + + E++ ++ +MPER++ + N++I + +A LFD
Sbjct: 276 VLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDE 335
Query: 82 SPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNV 141
KD+VT+++++ + E YE +A++ F+ M + +DE S L+ C LL V
Sbjct: 336 MLEKDMVTWSALIACFQQNEMYE-EAIRTFVGMHKIG--VMVDEVVAVSALSACANLLVV 392
Query: 142 GFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAA 201
G+ +H+ +K ++ ++LI MYSKC A ++F+ ++LIS N+M++
Sbjct: 393 NMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAY-LLDLISWNSMISG 451
Query: 202 CCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHT 261
+ ++ A F PE D VSW+++ISGY QN +E L LF M +G + +E T
Sbjct: 452 YLKCNLVDNAKAIFDSMPE-KDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETT 510
Query: 262 FASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKG 321
S +SAC L ++ K +H+++ +NGL N + + ++D+Y KC
Sbjct: 511 LVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKC-------------- 556
Query: 322 VRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSE 381
G +E A F + EK + W AL G E+ D+ S
Sbjct: 557 -----------------GCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSN 599
Query: 382 FVTKEGVVTDALILVILLGACALQAALHPGK-EIHAYILRMGVQMDKKLISTLVDMYSKC 440
+ K V + + + +LGAC + G+ ++ I +Q + K +VD+ +
Sbjct: 600 -MKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRA 658
Query: 441 GNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
G + AE + + D+ + ++ HG E + +++E ++PD F +
Sbjct: 659 GKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIE--LQPDHDGFHVL 716
Query: 500 LS 501
LS
Sbjct: 717 LS 718
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 184/406 (45%), Gaps = 74/406 (18%)
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
Y+Q L+ M N + + +T+ + AC R+ AK++H+ VLK G S
Sbjct: 187 AYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDS 246
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEAR------- 345
+ +V + +++ + C NM A + V +S S +S++ GY GN+EEA+
Sbjct: 247 DVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMP 306
Query: 346 ------------------------RHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSE 381
+ FD + EK++V W+AL + + Q E + +
Sbjct: 307 ERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACF---QQNEMYEEAIRT 363
Query: 382 FVT--KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
FV K GV+ D ++ V L ACA ++ GK IH+ L++G + L + L+ MYSK
Sbjct: 364 FVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSK 423
Query: 440 CGNMTY-------------------------------AEIIFQNFIERDLVLYNVMIACY 468
CG++ A+ IF + E+D+V ++ MI+ Y
Sbjct: 424 CGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGY 483
Query: 469 AHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE 528
A + ++ + LF+EM G KPD T V+++SA ++E G K+ ++ ++
Sbjct: 484 AQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQG-KWVHAYIKRNGLTIN 542
Query: 529 TDHYACMIDLYGRANQLEKAIEFM-----KSIPTEEDAVILGSFLN 569
+ID+Y + +E A+E K I T +A+ILG +N
Sbjct: 543 VILGTTLIDMYMKCGCVETALEVFYGMIEKGIST-WNALILGLAMN 587
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 36/259 (13%)
Query: 11 ICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSH 70
+ H ++K G N LI++YSK + +RKLFDE ++ SWN++IS +K +
Sbjct: 397 LIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCN 456
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
+ A+++FDS P KD+V+++SM+ GY + ++ + L LF EMQ + + DE T+ S
Sbjct: 457 LVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFD-ETLALFQEMQMSG--FKPDETTLVS 513
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
++ C +L + G+ +HA++ + + ++LIDMY KC C E A VF G E+
Sbjct: 514 VISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEK- 572
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
+WN LI G NG E L +F M
Sbjct: 573 --------------------------------GISTWNALILGLAMNGLVESSLDMFSNM 600
Query: 251 GENGVRWNEHTFASALSAC 269
+ V NE TF L AC
Sbjct: 601 KKCHVTPNEITFMGVLGAC 619
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 188/603 (31%), Positives = 299/603 (49%), Gaps = 71/603 (11%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYI-NAEGYEADALKLFIEMQSAD 118
N +I K + AR +FD +D++++N+M+ G N G+EA +F++MQ
Sbjct: 273 NALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEA--FTIFLKMQQ-- 328
Query: 119 EHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEE 178
E D T S LN V + +++H V+ + S+ + MY +C ++
Sbjct: 329 EGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDD 388
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
A +F+ ++A++ + +WN +I G Q
Sbjct: 389 AQLIFD------------------------KLAVR---------NVTTWNAMIGGVAQQK 415
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
E L LF++M G + TF + LSA G ++ KE+HS+ + GL+ + V +
Sbjct: 416 CGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLV-DLRVGN 474
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
+V +Y KC N YA+ + FD + E+NV
Sbjct: 475 ALVHMYAKCGNTMYAKQV-------------------------------FDDMVERNVTT 503
Query: 359 WTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
WT + SG + F L + + +EG+V DA V +L ACA AL KE+H++
Sbjct: 504 WTVMISGLAQHGCGHEAFSLFLQML-REGIVPDATTYVSILSACASTGALEWVKEVHSHA 562
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
+ G+ D ++ + LV MY+KCG++ A +F + +ERD+ + VMI A HG A+
Sbjct: 563 VNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDAL 622
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
LF +M +G KP+ +FVA+LSA H G V+ G + F S+T DY I P +HY CM+DL
Sbjct: 623 DLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDL 682
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARY 598
GRA QLE+A F+ ++P E G+ L C N E+A A ++ L+L+ + + Y
Sbjct: 683 LGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTY 742
Query: 599 VQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
V L+N+YAA GNW + +R M+ + G SW+ V+++IH F VGD SHP++ IY
Sbjct: 743 VLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVDNQIHSFVVGDTSHPESKEIY 802
Query: 659 SVL 661
+ L
Sbjct: 803 AKL 805
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 145/505 (28%), Positives = 226/505 (44%), Gaps = 112/505 (22%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A+ AGL L N L+H+Y+K + ++R +FD M ER++FSW +I +
Sbjct: 154 HSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRG 213
Query: 73 KQARSLFDSSPH----KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
++A SLF +L TY S+L NA +
Sbjct: 214 QEAFSLFLQMERGGCLPNLTTYLSIL----NAS-------------------------AI 244
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG-CT 187
TST L + +++H K + ++LI MY+KC ++A VF+G C
Sbjct: 245 TSTGAL-------EWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCD 297
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
+V +SWN +I G QNG E +F
Sbjct: 298 RDV----------------------------------ISWNAMIGGLAQNGCGHEAFTIF 323
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
++M + G + T+ S L+ + KE+H ++ GL+S+ V S V +Y +C
Sbjct: 324 LKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRC 383
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
G++++A+ FD L +NV W A+ G V
Sbjct: 384 -------------------------------GSIDDAQLIFDKLAVRNVTTWNAMIGG-V 411
Query: 368 KAQNC--EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
Q C EAL L + +EG DA V +L A + AL KE+H+Y + G+ +
Sbjct: 412 AQQKCGREALSLFLQ--MRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGL-V 468
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
D ++ + LV MY+KCGN YA+ +F + +ER++ + VMI+ A HG +A LF +ML
Sbjct: 469 DLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQML 528
Query: 486 EKGIKPDAVTFVAILSAFRHCGSVE 510
+GI PDA T+V+ILSA G++E
Sbjct: 529 REGIVPDATTYVSILSACASTGALE 553
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 150/286 (52%), Gaps = 40/286 (13%)
Query: 230 LISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG 289
+I GY + G AE+ +K++ +M G + NE T+ S L ACC ++K K+IH+ ++++G
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 290 LISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFD 349
S+ V + +V++Y KC G++++A+ FD
Sbjct: 61 FQSDVRVETALVNMYVKC-------------------------------GSIDDAQLIFD 89
Query: 350 SLTEKNVVVWTALFSG---YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQA 406
+ E+NV+ WT + G Y + Q EA L + +EG + ++ V +L A A
Sbjct: 90 KMVERNVISWTVMIGGLAHYGRGQ--EAFHRFLQ--MQREGFIPNSYTYVSILNANASAG 145
Query: 407 ALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIA 466
AL KE+H++ + G+ +D ++ + LV MY+K G++ A ++F +ERD+ + VMI
Sbjct: 146 ALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIG 205
Query: 467 CYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAIL--SAFRHCGSVE 510
A HG ++A LF +M G P+ T+++IL SA G++E
Sbjct: 206 GLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALE 251
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/420 (23%), Positives = 191/420 (45%), Gaps = 70/420 (16%)
Query: 93 MLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMV 152
M+ GY GY DA+K++ +M+ E + +E T S L C +++ +G+++HA ++
Sbjct: 1 MIGGYAEY-GYAEDAMKVYSQMRR--EGGQPNEITYLSILKACCSPVSLKWGKKIHAHII 57
Query: 153 KTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMAL 212
++ + ++L++MY KC ++A +F+ E
Sbjct: 58 QSGFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVER----------------------- 94
Query: 213 KTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGL 272
+ +SW +I G G +E F++M G N +T+ S L+A
Sbjct: 95 ----------NVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASA 144
Query: 273 RNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMI 332
++ KE+HS + GL + V + +V +Y K
Sbjct: 145 GALEWVKEVHSHAVNAGLALDLRVGNALVHMYAK-------------------------- 178
Query: 333 VGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDA 392
G++++AR FD + E+++ WT + G + + F L + + + G + +
Sbjct: 179 -----SGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQ-MERGGCLPNL 232
Query: 393 LILVILLGACALQA--ALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIF 450
+ +L A A+ + AL KE+H + + G D ++ + L+ MY+KCG++ A ++F
Sbjct: 233 TTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVF 292
Query: 451 QNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVE 510
+RD++ +N MI A +G +A +F +M ++G PD+ T++++L+ G+ E
Sbjct: 293 DGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWE 352
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 109/496 (21%), Positives = 203/496 (40%), Gaps = 114/496 (22%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A++ GL + +H+Y + + +++ +FD++ RNV +WN +I +
Sbjct: 358 HKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQK-- 415
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
CG +AL LF++M+ E D T + L
Sbjct: 416 ----------------------CG--------REALSLFLQMRR--EGFFPDATTFVNIL 443
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAV---SSLIDMYSKCRCYEEACRVFEGCTEE 189
+ V + + +++H++ + DA + ++L+ MY+KC A +VF+
Sbjct: 444 SANVGEEALEWVKEVHSYAI----DAGLVDLRVGNALVHMYAKCGNTMYAKQVFD----- 494
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
+++ +N +W +ISG Q+G E LF++
Sbjct: 495 -DMVERN---------------------------VTTWTVMISGLAQHGCGHEAFSLFLQ 526
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
M G+ + T+ S LSAC ++ KE+HS + GL+S+ V + +V +Y KC
Sbjct: 527 MLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKC-- 584
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
G++++ARR FD + E++V WT + G A
Sbjct: 585 -----------------------------GSVDDARRVFDDMLERDVYSWTVMIGGL--A 613
Query: 370 QNCEALFDLLSEFVTK--EGVVTDALILVILLGACALQAALHPG-KEIHAYILRMGVQMD 426
Q+ L D L FV EG + V +L AC+ + G ++ + G++
Sbjct: 614 QHGRGL-DALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPT 672
Query: 427 KKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
+ + +VD+ + G + A+ N IE + ++ +G+ E A +E L
Sbjct: 673 MEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMAEFAAKERL 732
Query: 486 EKGIKPDAVTFVAILS 501
+ +KP + + +LS
Sbjct: 733 K--LKPKSASTYVLLS 746
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 181/606 (29%), Positives = 303/606 (50%), Gaps = 68/606 (11%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
+ + FS N ++ KS + A ++F P D+V++N+++ G + E + ALKL
Sbjct: 220 DSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDL-ALKLLG 278
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
+M S M FT++S L C + V GRQLH+ ++K + F LIDMYSK
Sbjct: 279 KMGSYRVAPSM--FTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSK 336
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C ++A VF+ M K D + WN++IS
Sbjct: 337 CGLLQDARMVFD------------------------LMPXK---------DVIVWNSIIS 363
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
GY G E + LF M + G+ +N+ T ++ L + G + +++H+ +K+G
Sbjct: 364 GYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQY 423
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
+ +V++ ++D Y KC + A + + + + +SMI YS G EEA + + +
Sbjct: 424 DGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQ 483
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
++++ DA I L ACA +A GK
Sbjct: 484 DRDIK--------------------------------PDAFIFSSLFNACANLSAYEQGK 511
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
+IH ++L+ G+ D ++LV+MY+KCG++ A IF R +V ++ MI A HG
Sbjct: 512 QIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHG 571
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
H KA+ LF +ML+ GI P+ +T V++LSA H G V ++F M + I+P +HY
Sbjct: 572 HGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHY 631
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
ACM+D+ GR +L++A+ +K +P + A + G+ L R+++N EL A E LL LE
Sbjct: 632 ACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEP 691
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
++ LAN+YA+ G W + ++R+ M+ + G SW+ ++ +++ F VGD SHP
Sbjct: 692 EKSGTHILLANIYASTGMWDNVAKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVGDRSHP 751
Query: 653 KTNAIY 658
++ IY
Sbjct: 752 RSKEIY 757
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 133/493 (26%), Positives = 234/493 (47%), Gaps = 79/493 (16%)
Query: 32 IHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQA----RSLFDSSPHKDL 87
+++YSK R +RKL + E ++ SW+ +IS +++ ++A ++ +
Sbjct: 89 VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148
Query: 88 VTYNSMLCG---YINAE-GYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGF 143
T++S+L G N E G + + L EM S I +EF++++ LN C L + +
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTG--ISPNEFSLSTVLNACAGLEDENY 206
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
G ++H +++K D+ F+ ++L+DMY+K C E A V
Sbjct: 207 GMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAV--------------------- 245
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
F+ P+ D VSWN +I+G V + + LKL +MG V + T +
Sbjct: 246 -----------FYEIPK-PDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLS 293
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
SAL AC + VK +++HS ++K + + FV G++D+Y KC
Sbjct: 294 SALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKC---------------- 337
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV 383
G +++AR FD + K+V+VW ++ SGY NC + +S F
Sbjct: 338 ---------------GLLQDARMVFDLMPXKDVIVWNSIISGY---SNCGYDIEAMSLFT 379
Query: 384 T--KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
KEG+ + L +L + A A +++H ++ G Q D + ++L+D Y KC
Sbjct: 380 NMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCC 439
Query: 442 NMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
+ A +F+ DLV Y MI Y+ +G E+A+ ++ M ++ IKPDA F ++ +
Sbjct: 440 LLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFN 499
Query: 502 AFRHCGSVEMGEK 514
A + + E G++
Sbjct: 500 ACANLSAYEQGKQ 512
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/440 (23%), Positives = 188/440 (42%), Gaps = 100/440 (22%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K + + LI +YSK LL+++R +FD MP ++V WN+IIS
Sbjct: 312 HSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIIS-------- 363
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
GY N GY+ +A+ LF M E + ++ T+++ L
Sbjct: 364 -----------------------GYSNC-GYDIEAMSLFTNMYK--EGLEFNQTTLSTIL 397
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
GF Q+H +K+ G+ +SL+D Y KC E+A +VFE C E +L
Sbjct: 398 KSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAE-DL 456
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
++ +M+ A Y Q G EE LK+++RM +
Sbjct: 457 VAYTSMITA--------------------------------YSQYGLGEEALKMYLRMQD 484
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
++ + F+S +AC L + K+IH VLK GL+S+ F + +V++Y KC
Sbjct: 485 RDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKC----- 539
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G++++A F+ ++ + +V W+A+ G + +
Sbjct: 540 --------------------------GSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHG 573
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM-GVQMDKKLIS 431
L + + K G++ + + LV +L AC + + + ++ G+ ++ +
Sbjct: 574 RKALQLFYQML-KNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYA 632
Query: 432 TLVDMYSKCGNMTYAEIIFQ 451
+VD+ + G + A ++ +
Sbjct: 633 CMVDILGRVGRLDEAMVLVK 652
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
G IHA I+ L + LV++YSKC A + + E DLV ++ +I+ Y
Sbjct: 69 GMAIHARII---RLGLLGLRNRLVNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQ 125
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
+G E+A+L + EM G K + TF ++L ++E+G++
Sbjct: 126 NGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQ 169
>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 182/652 (27%), Positives = 314/652 (48%), Gaps = 98/652 (15%)
Query: 11 ICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSH 70
+ H Q + G T T + L+++Y+K + +S K+F+ M E NV SW
Sbjct: 192 MVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSW----------- 240
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
N+M+ G+ + + Y DA LF+ M E + D T
Sbjct: 241 --------------------NAMITGFTSNDLY-LDAFDLFLRMMG--EGVTPDAQTFIG 277
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L +V +++ + ++ D++ ++LIDM SKC +EA +F
Sbjct: 278 VAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNS----- 332
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
+ I+ CR + P WN +ISGY+++G E+ L+LF +M
Sbjct: 333 HFIT--------CR-----------FNAP-------WNAMISGYLRSGFNEKALELFAKM 366
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF-VSSGIVDVYCKCEN 309
+N + + +T+ S +A L+ + K++H+ +K+GL N +S+ + + Y KC
Sbjct: 367 CQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKC-- 424
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
G++E+ R+ F+ + +++++ WT+L + Y +
Sbjct: 425 -----------------------------GSLEDVRKVFNRMEDRDLISWTSLVTAYSQC 455
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
+ ++ S + EG+ + +L +CA L G+++H I ++G+ MDK +
Sbjct: 456 SEWDKAIEIFSN-MRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCI 514
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
S LVDMY+KCG + A+ +F D V + +IA +A HG + A+ LF M++ G+
Sbjct: 515 ESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGV 574
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
+P+AVTF+ +L A H G VE G +YF M Y + PE +HYAC++DL R L A+
Sbjct: 575 EPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAM 634
Query: 550 EFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEG 609
EF+ +P E + ++ + L CR++ N EL A +K+L + N A YV L+N Y G
Sbjct: 635 EFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESG 694
Query: 610 NWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
++ + +R M+ + GCSW+ V +H F GD HP+ + IY+ L
Sbjct: 695 SYKDGLSLRHLMKEQGVKKEPGCSWISVNGTLHKFYAGDQQHPEKDKIYAKL 746
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 133/561 (23%), Positives = 242/561 (43%), Gaps = 109/561 (19%)
Query: 6 LKEALICHVQAIKAGLT--LTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
LK+A H +K+ + + + N + H YSK + + + +LFD+M +RN FSW +I
Sbjct: 84 LKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLI 143
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
+ + G D + F EMQS + I
Sbjct: 144 AG--------------------------------LAENGLFLDGFEFFCEMQS--QGIFP 169
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
D+F + L +C+ L ++ G +HA +V + F ++L++MY+K + E++ +VF
Sbjct: 170 DQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVF 229
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
T EVN++ SWN +I+G+ N +
Sbjct: 230 NTMT-EVNVV--------------------------------SWNAMITGFTSNDLYLDA 256
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
LF+RM GV + TF A LR+V AKE+ + L+ G+ SN V + ++D+
Sbjct: 257 FDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDM 316
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS--LTEKNVVVWTA 361
KC G+++EAR F+S +T + W A
Sbjct: 317 NSKC-------------------------------GSLQEARSIFNSHFITCRFNAPWNA 345
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+ SGY+++ E +L ++ + + D + A A L GK++HA ++
Sbjct: 346 MISGYLRSGFNEKALELFAKMCQND-IYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKS 404
Query: 422 GVQMDKKLISTLV-DMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
G++++ IS V + Y+KCG++ +F +RDL+ + ++ Y+ +KAI +
Sbjct: 405 GLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEI 464
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH--YACMIDL 538
F M +GI P+ TF ++L + + +E G++ + K+ + D + ++D+
Sbjct: 465 FSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIIC---KVGLDMDKCIESALVDM 521
Query: 539 YGRANQLEKAIEFMKSIPTEE 559
Y + L A + I +
Sbjct: 522 YAKCGCLGDAKKVFNRISNAD 542
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 120/517 (23%), Positives = 211/517 (40%), Gaps = 119/517 (23%)
Query: 112 IEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKT--SNDASGFAVSSLIDM 169
+++ D H+++ + L CV + + +H F++K+ SN S ++ +
Sbjct: 57 VKVDKTDSHLQIQP--LVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHA 114
Query: 170 YSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNT 229
YSKC + ACR+F+ Q + SW
Sbjct: 115 YSKCSDIDAACRLFD---------------------------------QMSQRNTFSWTV 141
Query: 230 LISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG 289
LI+G +NG +G + F M G+ ++ ++ L C GL +++ +H+ ++ G
Sbjct: 142 LIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRG 201
Query: 290 LISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFD 349
S+ FVS+ ++++Y K + +E++ + F+
Sbjct: 202 FTSHTFVSTALLNMYAKLQ-------------------------------EIEDSYKVFN 230
Query: 350 SLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALH 409
++TE NVV W A+ +G+ FDL + EGV DA + + A + ++
Sbjct: 231 TMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMM-GEGVTPDAQTFIGVAKAIGMLRDVN 289
Query: 410 PGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQN-FIE-RDLVLYNVMIAC 467
KE+ Y L +GV + + + L+DM SKCG++ A IF + FI R +N MI+
Sbjct: 290 KAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISG 349
Query: 468 YAHHGHEEKAILLFEEMLEKGIKPDAVTFV------------------------------ 497
Y G EKA+ LF +M + I D T+
Sbjct: 350 YLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVN 409
Query: 498 ------AILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
A+ +A+ CGS+E K FN M IS + ++ Y + ++ +KAIE
Sbjct: 410 YVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLIS-----WTSLVTAYSQCSEWDKAIEI 464
Query: 552 MKSIPTEEDAV-------ILGSFLNVCRLNRNAELAG 581
++ E A +L S N+C L ++ G
Sbjct: 465 FSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHG 501
>gi|449467189|ref|XP_004151307.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like [Cucumis sativus]
Length = 711
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 186/656 (28%), Positives = 329/656 (50%), Gaps = 53/656 (8%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLV 88
N I ++ ++E+ +F+ MP +N SW +++A ++ ++ +AR +F+ P ++
Sbjct: 51 NSQITKLGRNGCIKEAESIFNRMPNKNTVSWTALLTAYAENSEINKAREVFNKIPDPNVA 110
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLH 148
+YN+M+ Y + +A +LF M + ++ + GF
Sbjct: 111 SYNAMITAY-HRRNMVDEAFELFSSMPQRN--------------SVSYATMITGFVHAGM 155
Query: 149 AFMVKTSNDASGFAVSS--LIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREG 206
M + + VSS LI+ YSK E+A R+F+G E+ +++S ++M++ CR G
Sbjct: 156 FDMAEKLHREKPVIVSSNVLINGYSKVGRVEDAVRIFDGMAEK-DVVSWSSMISGLCRVG 214
Query: 207 EMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASAL 266
++ A K F + P+ N V+W +I GY++ ++G LF+ M GV N T L
Sbjct: 215 KIVEARKLFDKMPDRN-VVTWTLMIDGYMKMNFLKDGFILFLNMRREGVEVNATTLTVLL 273
Query: 267 SACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSF 326
AC +IH VL G + ++++ I+ +Y +C +++ A L ++
Sbjct: 274 EACGSFDRYGEGIQIHGLVLSLGFDVDAYLANSIITMYSRCYSIDAAAKQFDLMVKKDIV 333
Query: 327 SISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKE 386
+ +S+I GY GN+E+A F+++ +K+VV WT L G+ + L K+
Sbjct: 334 TWNSLITGYVQSGNLEKAVFLFENMPQKDVVSWTTLICGFASEGRIDEFIGLFQMMPEKD 393
Query: 387 GVVTDALI------------------------------LVILLGACALQAALHPGKEIHA 416
+ A+I L +L A A A L+ G +IHA
Sbjct: 394 AIAWTAVISGLVSIEEYEIAFHWFIKMLQSVIKPNAFTLSCVLSAGASMAILNQGLQIHA 453
Query: 417 YILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
+ +M ++ D + ++LV MYSKCGN+ A +F ++V YN +I A +G ++
Sbjct: 454 IVTKMSMENDLSIQNSLVSMYSKCGNVDDALKMFYYIKVPNVVAYNTIITGLAQNGLGKE 513
Query: 477 AILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMI 536
A+ +F +M + + P+ +TF+ +LSA H G VE G +YF+ M + Y I PE DHYACM+
Sbjct: 514 ALEIFTKMQDDYLVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYDIQPEPDHYACMV 573
Query: 537 DLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKA 596
DL RA ++A+ + S+P + + G+ L + ++A A + L LE N+
Sbjct: 574 DLLCRAGMFDEAVSLVSSMPFDPHQGVWGAVLGASWTHLRLDVAELAAQNLFELEPNSAT 633
Query: 597 RYVQLANVYAAEGNWA--EMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVS 650
YV L+N+++ G+ E+ R+ K+ RG+K + GCSW+ ++ E+H+F G S
Sbjct: 634 PYVILSNLHSISGDERKHELIRLMKKSRGLK--KSPGCSWIILKDEVHLFHAGHQS 687
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 179/375 (47%), Gaps = 36/375 (9%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
+++N LI+ YSK + ++ ++FD M E++V SW+++IS + + +AR LFD P +
Sbjct: 170 VSSNVLINGYSKVGRVEDAVRIFDGMAEKDVVSWSSMISGLCRVGKIVEARKLFDKMPDR 229
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR 145
++VT+ M+ GY+ + D LF+ M+ E + ++ T+T L C G G
Sbjct: 230 NVVTWTLMIDGYMKM-NFLKDGFILFLNMRR--EGVEVNATTLTVLLEACGSFDRYGEGI 286
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
Q+H ++ D + +S+I MYS+C + A + F+ ++ ++++ N+++ +
Sbjct: 287 QIHGLVLSLGFDVDAYLANSIITMYSRCYSIDAAAKQFDLMVKK-DIVTWNSLITGYVQS 345
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE-NGVRW------- 257
G +E A+ F P+ D VSW TLI G+ G +E + LF M E + + W
Sbjct: 346 GNLEKAVFLFENMPQ-KDVVSWTTLICGFASEGRIDEFIGLFQMMPEKDAIAWTAVISGL 404
Query: 258 -----------------------NEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
N T + LSA + + +IH+ V K + ++
Sbjct: 405 VSIEEYEIAFHWFIKMLQSVIKPNAFTLSCVLSAGASMAILNQGLQIHAIVTKMSMENDL 464
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
+ + +V +Y KC N++ A M V N + +++I G + G +EA F + +
Sbjct: 465 SIQNSLVSMYSKCGNVDDALKMFYYIKVPNVVAYNTIITGLAQNGLGKEALEIFTKMQDD 524
Query: 355 NVVVWTALFSGYVKA 369
+V F G + A
Sbjct: 525 YLVPNHITFLGVLSA 539
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 137/294 (46%), Gaps = 69/294 (23%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACI 67
E + H + G + N +I +YS+ + + K FD M ++++ +WN++I+ +
Sbjct: 284 EGIQIHGLVLSLGFDVDAYLANSIITMYSRCYSIDAAAKQFDLMVKKDIVTWNSLITGYV 343
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGY------------------------------ 97
+S +L++A LF++ P KD+V++ +++CG+
Sbjct: 344 QSGNLEKAVFLFENMPQKDVVSWTTLICGFASEGRIDEFIGLFQMMPEKDAIAWTAVISG 403
Query: 98 -INAEGYEADALKLFIEM-QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTS 155
++ E YE A FI+M QS I+ + FT++ L+ + + G Q+HA + K S
Sbjct: 404 LVSIEEYEI-AFHWFIKMLQSV---IKPNAFTLSCVLSAGASMAILNQGLQIHAIVTKMS 459
Query: 156 NDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTF 215
+ +SL+ MYSKC G ++ ALK F
Sbjct: 460 MENDLSIQNSLVSMYSKC--------------------------------GNVDDALKMF 487
Query: 216 WRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
+ ++ + V++NT+I+G QNG +E L++F +M ++ + N TF LSAC
Sbjct: 488 YYI-KVPNVVAYNTIITGLAQNGLGKEALEIFTKMQDDYLVPNHITFLGVLSAC 540
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 175/592 (29%), Positives = 297/592 (50%), Gaps = 69/592 (11%)
Query: 69 SHDLKQARSLFDSSPH--KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEF 126
S L A LF PH + +YN ++ ++ A G+ DAL LF+EM D + D+
Sbjct: 115 SAHLSYAIRLFRLGPHPPRSARSYNILIRSFLRA-GHPEDALHLFVEMLD-DTAVSPDQH 172
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
TV +T+ C ++ ++ GR + A+ K F ++SLI MY+ C
Sbjct: 173 TVANTVKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASC------------- 219
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
G++ +A + ++ ++WN +I+GYV+NGD +E +++
Sbjct: 220 -------------------GDV-VAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEM 259
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
F M E ++E T S +AC L + + I + + G++ + +++ +VD+Y K
Sbjct: 260 FKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYAK 319
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
C G +++ARR FD + ++VV W+A+ SGY
Sbjct: 320 C-------------------------------GELDKARRLFDRMHSRDVVAWSAMISGY 348
Query: 367 VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMD 426
++ C + +E E V + + +V +L ACA+ AL GK +H+YI R + +
Sbjct: 349 TQSDRCREALAIFNEMQGTE-VNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLT 407
Query: 427 KKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
L + LVD Y+KCG + A F++ R+ + +I A +G +A+ LF MLE
Sbjct: 408 VILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLE 467
Query: 487 KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLE 546
I+P VTF+ +L A H VE G ++F SMT DY I P +HY CM+DL GRA ++
Sbjct: 468 ANIEPTDVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLID 527
Query: 547 KAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYA 606
+A +F++++P E +AV+ + L+ C +++N E+ EA ++++ L+ + Y+ L+N YA
Sbjct: 528 EAYQFIRNMPIEPNAVVWRALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYA 587
Query: 607 AEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
+ G W +RK+M+ + GCS + +E I F D HP+ IY
Sbjct: 588 SVGQWKNAAMVRKEMKEKGVEKIPGCSLIELEGTIFEFFAEDSEHPQLTEIY 639
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 119/556 (21%), Positives = 215/556 (38%), Gaps = 101/556 (18%)
Query: 16 AIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQA 75
A K G + N LIH+Y+ + + LF + + V +WN +I+ +K+ D K+
Sbjct: 197 AFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEV 256
Query: 76 RSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLC 135
+F K +E+++ DE T+ S C
Sbjct: 257 VEMF-----------------------------KGMLEVRAP-----FDEVTLLSVATAC 282
Query: 136 VKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISK 195
+L + G+ + + + S ++L+DMY+KC
Sbjct: 283 GRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYAKC---------------------- 320
Query: 196 NAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGV 255
GE++ A + F R D V+W+ +ISGY Q+ E L +F M V
Sbjct: 321 ----------GELDKARRLFDRM-HSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEV 369
Query: 256 RWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAES 315
N+ T S LSAC L ++ K +HS++ + L + + +VD Y KC + A
Sbjct: 370 NPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVK 429
Query: 316 MLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEAL 375
VRN+++ +++I G + G EA F S+ E N+ F G + A + L
Sbjct: 430 AFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCL 489
Query: 376 FD----LLSEFVTKEGV---VTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK 428
+ + G+ + +V LLG L E + +I M ++ +
Sbjct: 490 VEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLI------DEAYQFIRNMPIEPNAV 543
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVL---YNVMIACYAHHGHEEKAILLFEEML 485
+ L+ + N+ E + + D Y ++ YA G + A ++ +EM
Sbjct: 544 VWRALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMK 603
Query: 486 EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQL 545
EKG++ C +E+ F D + + ++Y + +++
Sbjct: 604 EKGVE-----------KIPGCSLIELEGTIFEFFAED-------SEHPQLTEIYEKVHEM 645
Query: 546 EKAIEFMKSIPTEEDA 561
+ I+ + IP DA
Sbjct: 646 IENIKMVGYIPNTADA 661
>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 182/652 (27%), Positives = 314/652 (48%), Gaps = 98/652 (15%)
Query: 11 ICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSH 70
+ H Q + G T T + L+++Y+K + +S K+F+ M E NV SW
Sbjct: 192 MVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSW----------- 240
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
N+M+ G+ + + Y DA LF+ M E + D T
Sbjct: 241 --------------------NAMITGFTSNDLY-LDAFDLFLRMMG--EGVTPDAQTFIG 277
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L +V +++ + ++ D++ ++LIDM SKC +EA +F
Sbjct: 278 VAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNS----- 332
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
+ I+ CR + P WN +ISGY+++G E+ L+LF +M
Sbjct: 333 HFIT--------CR-----------FNAP-------WNAMISGYLRSGFNEKALELFAKM 366
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF-VSSGIVDVYCKCEN 309
+N + + +T+ S +A L+ + K++H+ +K+GL N +S+ + + Y KC
Sbjct: 367 CQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKC-- 424
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
G++E+ R+ F+ + +++++ WT+L + Y +
Sbjct: 425 -----------------------------GSLEDVRKVFNRMEDRDLISWTSLVTAYSQC 455
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
+ ++ S + EG+ + +L +CA L G+++H I ++G+ MDK +
Sbjct: 456 SEWDKAIEIFSN-MRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCI 514
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
S LVDMY+KCG + A+ +F D V + +IA +A HG + A+ LF M++ G+
Sbjct: 515 ESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGV 574
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
+P+AVTF+ +L A H G VE G +YF M Y + PE +HYAC++DL R L A+
Sbjct: 575 EPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAM 634
Query: 550 EFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEG 609
EF+ +P E + ++ + L CR++ N EL A +K+L + N A YV L+N Y G
Sbjct: 635 EFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESG 694
Query: 610 NWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
++ + +R M+ + GCSW+ V +H F GD HP+ + IY+ L
Sbjct: 695 SYKDGLSLRHVMKEQGVKKEPGCSWISVNGTLHKFYAGDQQHPEKDKIYAKL 746
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 133/561 (23%), Positives = 242/561 (43%), Gaps = 109/561 (19%)
Query: 6 LKEALICHVQAIKAGLT--LTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
LK+A H +K+ + + + N + H YSK + + + +LFD+M +RN FSW +I
Sbjct: 84 LKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLI 143
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
+ + G D + F EMQS + I
Sbjct: 144 AG--------------------------------LAENGLFLDGFEFFCEMQS--QGIFP 169
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
D+F + L +C+ L ++ G +HA +V + F ++L++MY+K + E++ +VF
Sbjct: 170 DQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVF 229
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
T EVN++ SWN +I+G+ N +
Sbjct: 230 NTMT-EVNVV--------------------------------SWNAMITGFTSNDLYLDA 256
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
LF+RM GV + TF A LR+V AKE+ + L+ G+ SN V + ++D+
Sbjct: 257 FDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDM 316
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS--LTEKNVVVWTA 361
KC G+++EAR F+S +T + W A
Sbjct: 317 NSKC-------------------------------GSLQEARSIFNSHFITCRFNAPWNA 345
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+ SGY+++ E +L ++ + + D + A A L GK++HA ++
Sbjct: 346 MISGYLRSGFNEKALELFAKMCQND-IYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKS 404
Query: 422 GVQMDKKLISTLV-DMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
G++++ IS V + Y+KCG++ +F +RDL+ + ++ Y+ +KAI +
Sbjct: 405 GLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEI 464
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH--YACMIDL 538
F M +GI P+ TF ++L + + +E G++ + K+ + D + ++D+
Sbjct: 465 FSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIIC---KVGLDMDKCIESALVDM 521
Query: 539 YGRANQLEKAIEFMKSIPTEE 559
Y + L A + I +
Sbjct: 522 YAKCGCLGDAKKVFNRISNAD 542
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 120/517 (23%), Positives = 211/517 (40%), Gaps = 119/517 (23%)
Query: 112 IEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKT--SNDASGFAVSSLIDM 169
+++ D H+++ + L CV + + +H F++K+ SN S ++ +
Sbjct: 57 VKVDKTDSHLQIQP--LVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHA 114
Query: 170 YSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNT 229
YSKC + ACR+F+ Q + SW
Sbjct: 115 YSKCSDIDAACRLFD---------------------------------QMSQRNTFSWTV 141
Query: 230 LISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG 289
LI+G +NG +G + F M G+ ++ ++ L C GL +++ +H+ ++ G
Sbjct: 142 LIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRG 201
Query: 290 LISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFD 349
S+ FVS+ ++++Y K + +E++ + F+
Sbjct: 202 FTSHTFVSTALLNMYAKLQ-------------------------------EIEDSYKVFN 230
Query: 350 SLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALH 409
++TE NVV W A+ +G+ FDL + EGV DA + + A + ++
Sbjct: 231 TMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMM-GEGVTPDAQTFIGVAKAIGMLRDVN 289
Query: 410 PGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQN-FIE-RDLVLYNVMIAC 467
KE+ Y L +GV + + + L+DM SKCG++ A IF + FI R +N MI+
Sbjct: 290 KAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISG 349
Query: 468 YAHHGHEEKAILLFEEMLEKGIKPDAVTFV------------------------------ 497
Y G EKA+ LF +M + I D T+
Sbjct: 350 YLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVN 409
Query: 498 ------AILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
A+ +A+ CGS+E K FN M IS + ++ Y + ++ +KAIE
Sbjct: 410 YVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLIS-----WTSLVTAYSQCSEWDKAIEI 464
Query: 552 MKSIPTEEDAV-------ILGSFLNVCRLNRNAELAG 581
++ E A +L S N+C L ++ G
Sbjct: 465 FSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHG 501
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 183/613 (29%), Positives = 305/613 (49%), Gaps = 72/613 (11%)
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
+++ +K D++ A F ++ +++V +N ML Y G +++ +F++MQ E
Sbjct: 354 SLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAY-GQLGNLSESYWIFLQMQI--EG 410
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
+ +++T S L C L + G Q+H ++K+ + + S LIDMY+K
Sbjct: 411 LMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAK-------- 462
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
GE++ A R E D VSW +I+GY Q+
Sbjct: 463 ------------------------HGELDTARGILQRLRE-EDVVSWTAMIAGYTQHDLF 497
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
E LKLF M G+R + F+SA+SAC G++ + ++IH+ +G + + + +
Sbjct: 498 AEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNAL 557
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
V +Y +C G ++A F+ + K+ + W
Sbjct: 558 VSLYARC-------------------------------GRAQDAYLAFEKIDAKDNISWN 586
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
AL SG+ ++ +CE + S+ + + GV + + A A A + GK+IHA +++
Sbjct: 587 ALISGFAQSGHCEEALQVFSQ-MNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIK 645
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
G + + + L+ +YSKCG++ A+ F E+++V +N MI Y+ HG+ +A+ L
Sbjct: 646 TGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSL 705
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
FEEM + G+ P+ VTFV +LSA H G V G YF SM+ ++ + P+ +HY C++DL G
Sbjct: 706 FEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLG 765
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQ 600
RA L A EF++ +P E DA+I + L+ C +++N E+ A LL LE + A YV
Sbjct: 766 RAALLCCAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVL 825
Query: 601 LANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSV 660
L+N+YA G W R R+ M+ + G SW+ V++ IH F VGD HP IY
Sbjct: 826 LSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYE- 884
Query: 661 LAIFTGELYEIAG 673
+ +L E AG
Sbjct: 885 ---YIDDLNERAG 894
Score = 168 bits (426), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 141/563 (25%), Positives = 245/563 (43%), Gaps = 106/563 (18%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTI 62
S +L +A H + K+G + ++LI IY H + + KLFD++P NV WN +
Sbjct: 23 SGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKV 82
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
IS + Q LF L I E++
Sbjct: 83 ISGLLAKKLASQVLGLF-----------------------------SLMIT-----ENVT 108
Query: 123 MDEFTVTSTLNLCV-KLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
DE T S L C Q+HA ++ +S + LID+YSK
Sbjct: 109 PDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSK--------- 159
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
G +++A K + + L D+VSW +ISG QNG +
Sbjct: 160 -----------------------NGHVDLA-KLVFERLFLKDSVSWVAMISGLSQNGRED 195
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E + LF +M ++ V + F+S LSAC + K +++H +++K GL S FV + +V
Sbjct: 196 EAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALV 255
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
+Y + N+ AE + R+ S +S+I G + +G + A + F+ +
Sbjct: 256 TLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQ--------- 306
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
D + D + + LL ACA A + GK++H+Y+++M
Sbjct: 307 --------------LDCMK---------PDCVTVASLLSACASVGAGYKGKQLHSYVIKM 343
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
G+ D + +L+D+Y KC ++ A F ++VL+NVM+ Y G+ ++ +F
Sbjct: 344 GMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIF 403
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC--MIDLY 539
+M +G+ P+ T+ +IL G++++GE+ + K + + Y C +ID+Y
Sbjct: 404 LQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVI---KSGFQFNVYVCSVLIDMY 460
Query: 540 GRANQLEKAIEFMKSIPTEEDAV 562
+ +L+ A ++ + EED V
Sbjct: 461 AKHGELDTARGILQRL-REEDVV 482
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 125/492 (25%), Positives = 209/492 (42%), Gaps = 106/492 (21%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
+ +L+L E + H Q IK+G + LI +Y+KH L +R + + E
Sbjct: 428 LGALDLGEQI--HTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLRE------- 478
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
+D+V++ +M+ GY + + A+ALKLF EM+ ++
Sbjct: 479 ------------------------EDVVSWTAMIAGYTQHDLF-AEALKLFQEME--NQG 511
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
IR D +S ++ C + + G+Q+HA S I YS+
Sbjct: 512 IRSDNIGFSSAISACAGIQALNQGQQIHA--------------QSYISGYSE-------- 549
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+L NA+V+ R G + A F + + D +SWN LISG+ Q+G
Sbjct: 550 ----------DLSIGNALVSLYARCGRAQDAYLAF-EKIDAKDNISWNALISGFAQSGHC 598
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
EE L++F +M + GV N TF SA+SA N+K K+IH+ ++K G S S+ +
Sbjct: 599 EEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVL 658
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE----KNV 356
+ +Y KC ++ A+ +N S ++MI GYS G EA F+ + + N
Sbjct: 659 ITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNH 718
Query: 357 VVWTALFSG------------YVKAQNCE-----------ALFDLLS---------EFVT 384
V + + S Y ++ + E + DLL EF+
Sbjct: 719 VTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIE 778
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
+ + DA+I LL AC + + G+ ++L + + D L +MY+ G
Sbjct: 779 EMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPE-DSATYVLLSNMYAVSGKWD 837
Query: 445 YAEIIFQNFIER 456
Y + Q +R
Sbjct: 838 YRDRTRQMMKDR 849
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 54/118 (45%)
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
+ G+ + + L C +L K++HA I + G + L S L+D+Y G +
Sbjct: 3 ERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVD 62
Query: 445 YAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
A +F + ++ +N +I+ + + LF M+ + + PD TF ++L A
Sbjct: 63 NAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 188/678 (27%), Positives = 323/678 (47%), Gaps = 107/678 (15%)
Query: 24 TTITTNQLIHIYSKHNLLRES----RKLFDEMPERNVFSWNTIISAC------------- 66
T +T N +I Y++ ++E+ R++ DE E ++ ++ ++ AC
Sbjct: 126 TVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFH 185
Query: 67 ----------------------IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYE 104
+K + AR +FD +D+ T+N M+ GY + G
Sbjct: 186 AQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKS-GDG 244
Query: 105 ADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVS 164
A +LF MQ E + + + S L+ C + +G+ +HA + T +
Sbjct: 245 EKAFQLFYRMQQ--EGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVAT 302
Query: 165 SLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDA 224
+LI MY C E A RVF+ + ++ D
Sbjct: 303 ALIRMYMGCGSIEGARRVFD---------------------------------KMKVRDV 329
Query: 225 VSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSW 284
VSW +I GY +N + E+ LF M E G++ + T+ ++AC ++ A+EIHS
Sbjct: 330 VSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQ 389
Query: 285 VLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEA 344
V++ G ++ V + +V +Y KC G +++A
Sbjct: 390 VVRAGFGTDLLVDTALVHMYAKC-------------------------------GAIKDA 418
Query: 345 RRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACAL 404
R+ FD+++ ++VV W+A+ YV+ E F+ + + V D + + LL AC
Sbjct: 419 RQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETF-HLMKRNNVEPDVVTYINLLNACGH 477
Query: 405 QAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVM 464
AL G EI+ ++ + + + L++M K G++ A IF+N ++RD+V +NVM
Sbjct: 478 LGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVM 537
Query: 465 IACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYK 524
I Y+ HG+ +A+ LF+ ML++ +P++VTFV +LSA G VE G ++F+ +
Sbjct: 538 IGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRG 597
Query: 525 ISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAE 584
I P + Y CM+DL GRA +L++A + +P + ++ I + L CR+ N ++A A
Sbjct: 598 IVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVAERAA 657
Query: 585 EKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIF 644
E+ L E + A YVQL+++YAA G W + ++RK M + GC+W+ VE ++H F
Sbjct: 658 ERCLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGVRKEQGCTWIEVEGKLHTF 717
Query: 645 TVGDVSHPKTNAIYSVLA 662
V D SHP+ IY+ LA
Sbjct: 718 VVEDRSHPQAGEIYAELA 735
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 98/202 (48%), Gaps = 19/202 (9%)
Query: 359 WTALFSGYVKAQNCEALF-------DLLSEFVTKEGVVTDALILVILLGACALQAALHPG 411
W V++ C ++F D+L + D+ V L C + G
Sbjct: 22 WCGFLQQPVQSARCRSIFTGQVGANDVLHRLGEGSNHI-DSRTYVKLFQRCMMLRDAGLG 80
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
K++ +I++ G Q++ ++TL+ ++S CGNM A F + + +V +N +IA YA
Sbjct: 81 KQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQL 140
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSM-----TADYKIS 526
GH ++A LF +M+++ ++P +TF+ +L A +++G+++ + +D++I
Sbjct: 141 GHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIG 200
Query: 527 PETDHYACMIDLYGRANQLEKA 548
++ +Y + ++ A
Sbjct: 201 ------TALVSMYVKGGSMDGA 216
>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 833
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 193/650 (29%), Positives = 298/650 (45%), Gaps = 99/650 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H AIK G L+ +Y K ++ + K+F+E+P+
Sbjct: 264 HCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPD------------------- 304
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
K++ +N+++ Y+ GY DAL+++ +M+ + D FT+ + L
Sbjct: 305 ------------KEIELWNALISAYV-GNGYAYDALRIYKQMKLCT--VLSDSFTILNVL 349
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
GR +H +VK +S S+L+ MYSK A +F E
Sbjct: 350 TSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKER--- 406
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
D V+W ++ISG+ QN +E L F M
Sbjct: 407 ------------------------------DVVAWGSVISGFCQNRKYKEALDFFRAMEA 436
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+ V+ + AS +SAC GL V IH +V+K+GL + FV+S ++D+Y K
Sbjct: 437 DLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKF----- 491
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G E A F + KN+V W ++ S Y +
Sbjct: 492 --------------------------GFPERAGNIFSDMPLKNLVAWNSIISCYCRNNLP 525
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
+ +L S+ V + + D++ +L A + AAL GK +H Y++R+ + D ++ +T
Sbjct: 526 DLSINLFSQ-VLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLWIPFDLQVENT 584
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
L+DMY KCG + YA+ IF+ E++LV +N MI Y HG KAI LF+EM GIKPD
Sbjct: 585 LIDMYIKCGLLKYAQHIFERISEKNLVAWNSMIGGYGSHGECSKAIELFDEMRSSGIKPD 644
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
VTF+++LS+ H G +E G F M + I P +HY ++DLYGRA L A F+
Sbjct: 645 DVTFLSLLSSCNHSGLIEEGLHLFEMMKMKFGIEPRMEHYVNIVDLYGRAGCLGDAYSFV 704
Query: 553 KSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWA 612
K++P E D I S L C+++ N EL KLL +E + + YVQL N+Y W
Sbjct: 705 KNMPVEPDRSIWLSLLCSCKIHLNLELGEMVANKLLNMEPSKGSNYVQLLNLYGEAELWD 764
Query: 613 EMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLA 662
+R M+ + GCSW+ V +++ +F GD S P T IY L+
Sbjct: 765 RTANLRASMKEKGLKKTPGCSWIEVRNKVDVFYSGDCSSPITTEIYDTLS 814
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 141/625 (22%), Positives = 269/625 (43%), Gaps = 136/625 (21%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPER-----NVFSW 59
NL+ H I GL T+ LI+IY K ++ K+FD++P+ +V W
Sbjct: 68 NLQYGKTIHSSIITTGLHSDQYITSSLINIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIW 127
Query: 60 NTIISACIKSHDLKQA-----------------------RSLFDSSP------------- 83
N+II + L++ R++ + P
Sbjct: 128 NSIIDGYFRFGQLEEGMVQFGRMQSSGYKEGKQIHSYIVRNMLNFDPFLETALIDTYFKC 187
Query: 84 ---------------HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
++V +N M+ G+ G ++L+ ++ ++ E++++ +
Sbjct: 188 GRPTEARYLFKKLKDRSNIVAWNVMIGGF-GENGLWENSLEYYLLAKT--ENVKVVSSSF 244
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE 188
T TL+ C + V FG+Q+H +K + + +SL+ MY KC+ E A +VF +
Sbjct: 245 TCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPD 304
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
+ E+E+ WN LIS YV NG A + L+++
Sbjct: 305 K-----------------EIEL----------------WNALISAYVGNGYAYDALRIYK 331
Query: 249 RMGENGVRWNEHTFASAL--SACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
+M V + T + L S+ GL ++ + IH+ ++K L S+ + S ++ +Y K
Sbjct: 332 QMKLCTVLSDSFTILNVLTSSSMAGLYDL--GRLIHTEIVKRPLQSSITIQSALLTMYSK 389
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
+ NYA S+ F ++ E++VV W ++ SG+
Sbjct: 390 FGDSNYANSI-------------------------------FSTMKERDVVAWGSVISGF 418
Query: 367 VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMD 426
+ + + D + + V D+ I+ ++ AC + G IH ++++ G+Q+D
Sbjct: 419 CQNRKYKEALDFFRA-MEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLD 477
Query: 427 KKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
+ S+L+DMYSK G A IF + ++LV +N +I+CY + + +I LF ++L
Sbjct: 478 VFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLR 537
Query: 487 KGIKPDAVTFVAILSAFRHCGSVEMGEK---YFNSMTADYKISPETDHYACMIDLYGRAN 543
+ PD+V+F ++L+A ++ G+ Y + + + E +ID+Y +
Sbjct: 538 NDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLWIPFDLQVEN----TLIDMYIKCG 593
Query: 544 QLEKAIEFMKSIPTEEDAVILGSFL 568
L+ A + I +E++ V S +
Sbjct: 594 LLKYAQHIFERI-SEKNLVAWNSMI 617
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 109/463 (23%), Positives = 195/463 (42%), Gaps = 95/463 (20%)
Query: 106 DALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS 165
+ALKL+ + + FT S L C L N+ +G+ +H+ ++ T + + SS
Sbjct: 39 EALKLYTK-----SPVYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGLHSDQYITSS 93
Query: 166 LIDMYSKCRCYEEACRVFEGCTEEVNLISK----NAMVAACCREGEMEMALKTFWR---- 217
LI++Y KC + +A +VF+ + + N+++ R G++E + F R
Sbjct: 94 LINIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQSS 153
Query: 218 -------------------QPELNDA---------------------------VSWNTLI 231
P L A V+WN +I
Sbjct: 154 GYKEGKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMI 213
Query: 232 SGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI 291
G+ +NG E L+ ++ V+ +F LSAC V K++H +K G
Sbjct: 214 GGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFE 273
Query: 292 SNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL 351
+P+V + ++ +Y KC+ MI E A + F+ +
Sbjct: 274 DDPYVHTSLLTMYGKCQ----------------------MI---------ESAEKVFNEV 302
Query: 352 TEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKE--GVVTDALILVILLGACALQAALH 409
+K + +W AL S YV N A +D L + + V++D+ ++ +L + ++
Sbjct: 303 PDKEIELWNALISAYVG--NGYA-YDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYD 359
Query: 410 PGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYA 469
G+ IH I++ +Q + S L+ MYSK G+ YA IF ERD+V + +I+ +
Sbjct: 360 LGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFC 419
Query: 470 HHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMG 512
+ ++A+ F M +KPD+ +I+SA V++G
Sbjct: 420 QNRKYKEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLG 462
>gi|449451241|ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Cucumis sativus]
Length = 908
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 187/676 (27%), Positives = 329/676 (48%), Gaps = 70/676 (10%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
+R+++ + H +K GL N L+ +Y K L +LF+EMPER++ SWN
Sbjct: 207 IRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLFEEMPERDITSWN 266
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
T+IS+ +K +A F LC +
Sbjct: 267 TVISSLVKEFKYDEAFDYFR----------GMQLC-----------------------KG 293
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
+++D F++++ L C + G+QLHA +K ++ SSLI Y+KC +
Sbjct: 294 LKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVT 353
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+FE ++I+ M+ + G ++ A++ F + P+ N +S+N +++G +N D
Sbjct: 354 DLFETMPIR-DVITWTGMITSYMEFGMLDSAVEVFNKMPKRN-CISYNAVLAGLSRNDDG 411
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
L+LF+ M E GV ++ T S ++AC L++ K +++I +V+K G++SN + + +
Sbjct: 412 SRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETAL 471
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFS--ISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
VD+Y +C M AE + + + N ++ ++SMI GY+ G + EA F S +
Sbjct: 472 VDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEG--- 528
Query: 359 WTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
+V D ++ +L C GK++H +
Sbjct: 529 ----------------------------AIVMDEVMSTSILSLCGSIGFHEMGKQMHCHA 560
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
L+ G+ + + + V MYSKC NM A +F +D+V +N ++A + H +KA+
Sbjct: 561 LKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQGDKAL 620
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHC--GSVEMGEKYFNSMTADYKISPETDHYACMI 536
++++M + GIKPD++TF I+SA++H V+ F SM ++ I P +HYA I
Sbjct: 621 GIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSMETEHNIKPTLEHYASFI 680
Query: 537 DLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKA 596
+ GR LE+A + ++++P E D + + LN CR+N+N L A +L +E +
Sbjct: 681 SVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNSCRINKNERLEKLAARNILAVEPKDPL 740
Query: 597 RYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNA 656
Y+ +N+Y+A G W ++R+ MR + SW+ E++IH F D SHP+
Sbjct: 741 SYILKSNLYSASGRWYYSEKVREDMREKGFRKHPSQSWIIHENKIHSFYARDRSHPQGKD 800
Query: 657 IYSVLAIFTGELYEIA 672
IYS L I E ++
Sbjct: 801 IYSGLEILILECLKVG 816
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 129/487 (26%), Positives = 232/487 (47%), Gaps = 48/487 (9%)
Query: 35 YSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSML 94
Y +L R F ++ E ++F N +ISA +K ++ A +F ++V+Y +++
Sbjct: 110 YGDPDLARAVHAQFLKL-EEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALI 168
Query: 95 CGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKT 154
G+ ++ +E +A++LF M D I +E+T + L C++ ++ G Q+H +VK
Sbjct: 169 SGFSKSD-WEDEAVELFFAM--LDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKL 225
Query: 155 SNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKT 214
+ F ++L+ +Y KC G +++ L+
Sbjct: 226 GLLSCVFICNALMGLYCKC--------------------------------GFLDLVLRL 253
Query: 215 FWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE-NGVRWNEHTFASALSACCGLR 273
F PE D SWNT+IS V+ +E F M G++ + + ++ L+AC G
Sbjct: 254 FEEMPE-RDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSV 312
Query: 274 NVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIV 333
+++H+ LK GL S+ VSS ++ Y KC + N + +R+ + + MI
Sbjct: 313 KPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTGMIT 372
Query: 334 GYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDAL 393
Y G ++ A F+ + ++N + + A+ +G + + +L E + +EGV
Sbjct: 373 SYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEML-EEGVEISDC 431
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIF-QN 452
L ++ AC L + ++I ++++ G+ + + + LVDMY++CG M AE IF Q
Sbjct: 432 TLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQR 491
Query: 453 FIERDLV-LYNVMIACYAHHGHEEKAILLFEEMLEKG-IKPDAVTFVAILSAFRHCGSV- 509
+E D + MI YA +G +AI LF +G I D V +ILS CGS+
Sbjct: 492 SLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSL---CGSIG 548
Query: 510 --EMGEK 514
EMG++
Sbjct: 549 FHEMGKQ 555
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 111/248 (44%), Gaps = 13/248 (5%)
Query: 318 LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA----QNCE 373
LK + F +++I Y G + +A + F L+ NVV +TAL SG+ K+ + E
Sbjct: 123 FLKLEEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVE 182
Query: 374 ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL 433
F +L G+ + V +L AC G ++H ++++G+ + + L
Sbjct: 183 LFFAMLDS-----GIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNAL 237
Query: 434 VDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM-LEKGIKPD 492
+ +Y KCG + +F+ ERD+ +N +I+ ++A F M L KG+K D
Sbjct: 238 MGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVD 297
Query: 493 AVTFVAILSAFRHCGSVE-MGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
+ +L+A GSV+ M + +++ + + +I Y + +
Sbjct: 298 HFSLSTLLTAC--AGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDL 355
Query: 552 MKSIPTEE 559
+++P +
Sbjct: 356 FETMPIRD 363
>gi|449530420|ref|XP_004172193.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like, partial [Cucumis sativus]
Length = 719
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 186/656 (28%), Positives = 329/656 (50%), Gaps = 53/656 (8%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLV 88
N I ++ ++E+ +F+ MP +N SW +++A ++ ++ +AR +F+ P ++
Sbjct: 59 NSQITKLGRNGCIKEAESIFNRMPNKNTVSWTALLTAYAENSEINKAREVFNKIPDPNVA 118
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLH 148
+YN+M+ Y + +A +LF M + ++ + GF
Sbjct: 119 SYNAMITAY-HRRNMVDEAFELFSSMPQRN--------------SVSYATMITGFVHAGM 163
Query: 149 AFMVKTSNDASGFAVSS--LIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREG 206
M + + VSS LI+ YSK E+A R+F+G E+ +++S ++M++ CR G
Sbjct: 164 FDMAEKLHREKPVIVSSNVLINGYSKVGRVEDAVRIFDGMAEK-DVVSWSSMISGLCRVG 222
Query: 207 EMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASAL 266
++ A K F + P+ N V+W +I GY++ ++G LF+ M GV N T L
Sbjct: 223 KIVEARKLFDKMPDRN-VVTWTLMIDGYMKMNFLKDGFILFLNMRREGVEVNATTLTVLL 281
Query: 267 SACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSF 326
AC +IH VL G + ++++ I+ +Y +C +++ A L ++
Sbjct: 282 EACGSFDRYGEGIQIHGLVLSLGFDVDAYLANSIITMYSRCYSIDAAAKQFDLMVKKDIV 341
Query: 327 SISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKE 386
+ +S+I GY GN+E+A F+++ +K+VV WT L G+ + L K+
Sbjct: 342 TWNSLITGYVQSGNLEKAVFLFENMPQKDVVSWTTLICGFASEGRIDEFIGLFQMMPEKD 401
Query: 387 GVVTDALI------------------------------LVILLGACALQAALHPGKEIHA 416
+ A+I L +L A A A L+ G +IHA
Sbjct: 402 AIAWTAVISGLVSIEEYEIAFHWFIKMLQSVIKPNAFTLSCVLSAGASMAILNQGLQIHA 461
Query: 417 YILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
+ +M ++ D + ++LV MYSKCGN+ A +F ++V YN +I A +G ++
Sbjct: 462 IVTKMSMENDLSIQNSLVSMYSKCGNVDDALKMFYYIKVPNVVAYNTIITGLAQNGLGKE 521
Query: 477 AILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMI 536
A+ +F +M + + P+ +TF+ +LSA H G VE G +YF+ M + Y I PE DHYACM+
Sbjct: 522 ALEIFTKMQDDYLVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYDIQPEPDHYACMV 581
Query: 537 DLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKA 596
DL RA ++A+ + S+P + + G+ L + ++A A + L LE N+
Sbjct: 582 DLLCRAGMFDEAVSLVSSMPFDPHQGVWGAVLGASWTHLRLDVAELAAQNLFELEPNSAT 641
Query: 597 RYVQLANVYAAEGNWA--EMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVS 650
YV L+N+++ G+ E+ R+ K+ RG+K + GCSW+ ++ E+H+F G S
Sbjct: 642 PYVILSNLHSISGDERKHELIRLMKKSRGLK--KSPGCSWIILKDEVHLFHAGHQS 695
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 179/375 (47%), Gaps = 36/375 (9%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
+++N LI+ YSK + ++ ++FD M E++V SW+++IS + + +AR LFD P +
Sbjct: 178 VSSNVLINGYSKVGRVEDAVRIFDGMAEKDVVSWSSMISGLCRVGKIVEARKLFDKMPDR 237
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR 145
++VT+ M+ GY+ + D LF+ M+ E + ++ T+T L C G G
Sbjct: 238 NVVTWTLMIDGYMKM-NFLKDGFILFLNMRR--EGVEVNATTLTVLLEACGSFDRYGEGI 294
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
Q+H ++ D + +S+I MYS+C + A + F+ ++ ++++ N+++ +
Sbjct: 295 QIHGLVLSLGFDVDAYLANSIITMYSRCYSIDAAAKQFDLMVKK-DIVTWNSLITGYVQS 353
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE-NGVRW------- 257
G +E A+ F P+ D VSW TLI G+ G +E + LF M E + + W
Sbjct: 354 GNLEKAVFLFENMPQ-KDVVSWTTLICGFASEGRIDEFIGLFQMMPEKDAIAWTAVISGL 412
Query: 258 -----------------------NEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
N T + LSA + + +IH+ V K + ++
Sbjct: 413 VSIEEYEIAFHWFIKMLQSVIKPNAFTLSCVLSAGASMAILNQGLQIHAIVTKMSMENDL 472
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
+ + +V +Y KC N++ A M V N + +++I G + G +EA F + +
Sbjct: 473 SIQNSLVSMYSKCGNVDDALKMFYYIKVPNVVAYNTIITGLAQNGLGKEALEIFTKMQDD 532
Query: 355 NVVVWTALFSGYVKA 369
+V F G + A
Sbjct: 533 YLVPNHITFLGVLSA 547
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 137/294 (46%), Gaps = 69/294 (23%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACI 67
E + H + G + N +I +YS+ + + K FD M ++++ +WN++I+ +
Sbjct: 292 EGIQIHGLVLSLGFDVDAYLANSIITMYSRCYSIDAAAKQFDLMVKKDIVTWNSLITGYV 351
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGY------------------------------ 97
+S +L++A LF++ P KD+V++ +++CG+
Sbjct: 352 QSGNLEKAVFLFENMPQKDVVSWTTLICGFASEGRIDEFIGLFQMMPEKDAIAWTAVISG 411
Query: 98 -INAEGYEADALKLFIEM-QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTS 155
++ E YE A FI+M QS I+ + FT++ L+ + + G Q+HA + K S
Sbjct: 412 LVSIEEYEI-AFHWFIKMLQSV---IKPNAFTLSCVLSAGASMAILNQGLQIHAIVTKMS 467
Query: 156 NDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTF 215
+ +SL+ MYSKC G ++ ALK F
Sbjct: 468 MENDLSIQNSLVSMYSKC--------------------------------GNVDDALKMF 495
Query: 216 WRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
+ ++ + V++NT+I+G QNG +E L++F +M ++ + N TF LSAC
Sbjct: 496 Y-YIKVPNVVAYNTIITGLAQNGLGKEALEIFTKMQDDYLVPNHITFLGVLSAC 548
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 183/675 (27%), Positives = 327/675 (48%), Gaps = 74/675 (10%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKL----FDEMPERNVFSWNT 61
+KE L Q G++ +T L+ ++ ++L E +++ +E ++
Sbjct: 210 VKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTA 269
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+++ C++ D+ A+ F +D+V YN+++ + G+ +A + + M+S + +
Sbjct: 270 LVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAA-LAQHGHNVEAFEQYYRMRS--DGV 326
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
++ T S LN C + G+ +H+ + + + + ++LI MY++C
Sbjct: 327 ALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARC-------- 378
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
G++ A + F+ P+ D +SWN +I+GY + D
Sbjct: 379 ------------------------GDLPKARELFYTMPK-RDLISWNAIIAGYARREDRG 413
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E ++L+ +M GV+ TF LSAC K IH +L++G+ SN +++ ++
Sbjct: 414 EAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALM 473
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
++Y +C G++ EA+ F+ ++V+ W +
Sbjct: 474 NMYRRC-------------------------------GSLMEAQNVFEGTQARDVISWNS 502
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+ +G+ + + E + L E +E + D + +L C AL GK+IH I
Sbjct: 503 MIAGHAQHGSYETAYKLFQEMQNEE-LEPDNITFASVLSGCKNPEALELGKQIHGRITES 561
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
G+Q+D L + L++MY +CG++ A +F + RD++ + MI A G + KAI LF
Sbjct: 562 GLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELF 621
Query: 482 EEMLEKGIKP-DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
+M +G +P D TF +ILSA H G V G + F+SM ++Y + P +HY C++ L G
Sbjct: 622 WQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLG 681
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQ 600
RA + ++A + +P DA + + L CR++ N LA A L+L N A Y+
Sbjct: 682 RARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYIL 741
Query: 601 LANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSV 660
L+NVYAA G W ++ +IR+ M G + G SW+ V++ IH F D SHP+T IY+
Sbjct: 742 LSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAE 801
Query: 661 LAIFTGELYEIAGAF 675
L + E+ E AG F
Sbjct: 802 LKRLSVEMEE-AGYF 815
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 149/631 (23%), Positives = 258/631 (40%), Gaps = 148/631 (23%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L EA H Q ++AG+ +N LI++Y K + ++ ++F EMP R+V SWN++IS
Sbjct: 43 LPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISC 102
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
+ +G++ A +LF EMQ+A ++
Sbjct: 103 YAQ--------------------------------QGFKKKAFQLFEEMQNAG--FIPNK 128
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
T S L C + G+++H+ ++K +SL+ MY KC A +VF G
Sbjct: 129 ITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAG 188
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
+ D VS+NT++ Y Q +E L
Sbjct: 189 ISPR---------------------------------DVVSYNTMLGLYAQKAYVKECLG 215
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
LF +M G+ ++ T+ + L A + K IH ++ GL S+ V + +V +
Sbjct: 216 LFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCV 275
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
+C G+++ A++ F + +++VVV+ AL +
Sbjct: 276 RC-------------------------------GDVDSAKQAFKGIADRDVVVYNALIAA 304
Query: 366 YVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
+ N EA + +GV + + +L AC+ AL GK IH++I G
Sbjct: 305 LAQHGHNVEAFEQYYR--MRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHS 362
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
D ++ + L+ MY++CG++ A +F +RDL+ +N +IA YA +A+ L+++M
Sbjct: 363 SDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQM 422
Query: 485 LEKGIKPDAVTFVAILSA-----------------------------------FRHCGSV 509
+G+KP VTF+ +LSA +R CGS+
Sbjct: 423 QSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSL 482
Query: 510 EMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE---DAVILGS 566
+ F A IS + MI + + E A + + + EE D + S
Sbjct: 483 MEAQNVFEGTQARDVIS-----WNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFAS 537
Query: 567 FLNVCR----LNRNAELAGEAEEKLLRLEGN 593
L+ C+ L ++ G E L+L+ N
Sbjct: 538 VLSGCKNPEALELGKQIHGRITESGLQLDVN 568
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/449 (26%), Positives = 199/449 (44%), Gaps = 76/449 (16%)
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
D T + L C + + +++HA MV+ F + LI+MY KCR +A +VF
Sbjct: 26 DRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVF 85
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
+ EM + D +SWN+LIS Y Q G ++
Sbjct: 86 K------------------------EMPRR---------DVISWNSLISCYAQQGFKKKA 112
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
+LF M G N+ T+ S L+AC ++ K+IHS ++K G +P V + ++ +
Sbjct: 113 FQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSM 172
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y KC G++ AR+ F ++ ++VV + +
Sbjct: 173 YGKC-------------------------------GDLPRARQVFAGISPRDVVSYNTML 201
Query: 364 SGYVK---AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
Y + + C LF +S EG+ D + + LL A + L GK IH +
Sbjct: 202 GLYAQKAYVKECLGLFGQMS----SEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVE 257
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
G+ D ++ + LV M +CG++ A+ F+ +RD+V+YN +IA A HGH +A
Sbjct: 258 EGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQ 317
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
+ M G+ + T+++IL+A ++E G K +S ++ S + +I +Y
Sbjct: 318 YYRMRSDGVALNRTTYLSILNACSTSKALEAG-KLIHSHISEDGHSSDVQIGNALISMYA 376
Query: 541 RANQLEKAIEFMKSIPTEE----DAVILG 565
R L KA E ++P + +A+I G
Sbjct: 377 RCGDLPKARELFYTMPKRDLISWNAIIAG 405
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 149/308 (48%), Gaps = 34/308 (11%)
Query: 261 TFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLK 320
T+ + L C R + AK IH+ +++ G+ + F+S+ ++++Y KC S+L
Sbjct: 29 TYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCR------SVL--- 79
Query: 321 GVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLS 380
+A + F + ++V+ W +L S Y + + F L
Sbjct: 80 ----------------------DAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFE 117
Query: 381 EFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC 440
E + G + + + + +L AC A L GK+IH+ I++ G Q D ++ ++L+ MY KC
Sbjct: 118 E-MQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKC 176
Query: 441 GNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAIL 500
G++ A +F RD+V YN M+ YA + ++ + LF +M +GI PD VT++ +L
Sbjct: 177 GDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLL 236
Query: 501 SAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEED 560
AF ++ G K + +T + ++ + ++ + R ++ A + K I + D
Sbjct: 237 DAFTTPSMLDEG-KRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGI-ADRD 294
Query: 561 AVILGSFL 568
V+ + +
Sbjct: 295 VVVYNALI 302
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 113/235 (48%), Gaps = 11/235 (4%)
Query: 390 TDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEII 449
TD V LL C + L K IHA ++ GV D L + L++MY KC ++ A +
Sbjct: 25 TDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQV 84
Query: 450 FQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSV 509
F+ RD++ +N +I+CYA G ++KA LFEEM G P+ +T+++IL+A +
Sbjct: 85 FKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAEL 144
Query: 510 EMGEKYFNS-MTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAV----IL 564
E G+K + + A Y+ P + ++ +YG+ L +A + I + D V +L
Sbjct: 145 ENGKKIHSQIIKAGYQRDPRVQN--SLLSMYGKCGDLPRARQVFAGI-SPRDVVSYNTML 201
Query: 565 GSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRK 619
G + + L G+ + + +K Y+ L + + E RI K
Sbjct: 202 GLYAQKAYVKECLGLFGQMSSEGI---SPDKVTYINLLDAFTTPSMLDEGKRIHK 253
>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Glycine max]
Length = 849
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 205/697 (29%), Positives = 335/697 (48%), Gaps = 113/697 (16%)
Query: 7 KEALICHVQAIKAGLTL-TTITTNQLIHIYSKHNLLRESRKLFDEM------PERNVFSW 59
K + + I GL + TT+T +I Y+K S KLF++M P+R V S
Sbjct: 201 KRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVIS- 259
Query: 60 NTIISAC-----------------------------------IKSHDLKQARSLFDSSPH 84
+++SAC +K H +K R LF+
Sbjct: 260 -SVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVD 318
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
KD+V++ +M+ G + + DA+ LF+EM + + D F TS LN C L + G
Sbjct: 319 KDVVSWTTMIAGCMQ-NSFHGDAMDLFVEM--VRKGWKPDAFGCTSVLNSCGSLQALQKG 375
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
RQ+HA+ +K + D F + LIDMY+KC A +VF+ +VAA
Sbjct: 376 RQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFD-------------LVAAI-- 420
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFAS 264
+ VS+N +I GY + E L LF M + TF S
Sbjct: 421 ------------------NVVSYNAMIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFVS 462
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
L L ++ + +IH ++K G+ + F S ++DVY KC
Sbjct: 463 LLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCS---------------- 506
Query: 325 SFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVT 384
VG +AR F+ + ++++VVW A+FSGY + E L +
Sbjct: 507 -------CVG--------DARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQM 551
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
+ + ++ A + A+L G++ H +++MG+ D + ++LVDMY+KCG++
Sbjct: 552 SR-LKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCGSIE 610
Query: 445 YAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR 504
+ F + +RD+ +N MI+ YA HG KA+ +FE M+ +G+KP+ VTFV +LSA
Sbjct: 611 ESHKAFSSTNQRDIACWNSMISTYAQHGDAAKALEVFERMIMEGVKPNYVTFVGLLSACS 670
Query: 505 HCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVIL 564
H G +++G +F SM+ + I P DHYACM+ L GRA ++ +A EF+K +P + AV+
Sbjct: 671 HAGLLDLGFHHFESMSK-FGIEPGIDHYACMVSLLGRAGKIYEAKEFVKKMPIKPAAVVW 729
Query: 565 GSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGM 624
S L+ CR++ + EL A E + + + Y+ L+N++A++G WA + +R++M
Sbjct: 730 RSLLSACRVSGHVELGTYAAEMAISCDPADSGSYILLSNIFASKGMWASVRMVREKMDMS 789
Query: 625 KGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+ + G SW+ V +E+H F D +H + I VL
Sbjct: 790 RVVKEPGWSWIEVNNEVHRFIARDTAHRDSTLISLVL 826
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 133/446 (29%), Positives = 212/446 (47%), Gaps = 69/446 (15%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
+ +VF NT++ A K + A+ LFD+ PH++LVT++SM+ Y GY +AL LF
Sbjct: 84 QHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQ-HGYSVEALLLFC 142
Query: 113 E-MQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYS 171
M+S E + +E+ + S + C +L N+ QLH F+VK + +SLID Y+
Sbjct: 143 RFMRSCSE--KPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYA 200
Query: 172 KCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLI 231
K +EA +F+G + +KT V+W +I
Sbjct: 201 KRGYVDEARLIFDG------------------------LKVKT---------TVTWTAII 227
Query: 232 SGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI 291
+GY + G +E LKLF +M E V + + +S LSAC L ++ K+IH +VL+ G
Sbjct: 228 AGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFD 287
Query: 292 SNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL 351
+ V +GI+D Y KC + + R+ F+ L
Sbjct: 288 MDVSVVNGIIDFYLKCHKV-------------------------------KTGRKLFNRL 316
Query: 352 TEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG 411
+K+VV WT + +G ++ DL E V K G DA +L +C AL G
Sbjct: 317 VDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRK-GWKPDAFGCTSVLNSCGSLQALQKG 375
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
+++HAY +++ + D + + L+DMY+KC ++T A +F ++V YN MI Y+
Sbjct: 376 RQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQ 435
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFV 497
+A+ LF EM P +TFV
Sbjct: 436 DKLVEALDLFREMRLSLSPPTLLTFV 461
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 173/357 (48%), Gaps = 41/357 (11%)
Query: 196 NAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR-MGENG 254
N ++ A + A K F P N V+W++++S Y Q+G + E L LF R M
Sbjct: 91 NTLLHAYSKMNLQSDAQKLFDTMPHRN-LVTWSSMVSMYTQHGYSVEALLLFCRFMRSCS 149
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
+ NE+ AS + AC L N+ A ++H +V+K G + + +V + ++D Y K
Sbjct: 150 EKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYAK-------- 201
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEA 374
+G ++EAR FD L K V WTA+ +GY K E
Sbjct: 202 -----------------------RGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEV 238
Query: 375 LFDLLSEFVTKEG-VVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL 433
L ++ +EG V D ++ +L AC++ L GK+IH Y+LR G MD +++ +
Sbjct: 239 SLKLFNQM--REGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGI 296
Query: 434 VDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDA 493
+D Y KC + +F +++D+V + MIA + A+ LF EM+ KG KPDA
Sbjct: 297 IDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDA 356
Query: 494 VTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA--CMIDLYGRANQLEKA 548
++L++ CGS++ +K K++ + D + +ID+Y + + L A
Sbjct: 357 FGCTSVLNS---CGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNA 410
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 409 HPGKEIHAYILRMGV-QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIAC 467
H K+IHA+I+ +G Q D L++TL+ YSK + A+ +F R+LV ++ M++
Sbjct: 68 HYYKKIHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSM 127
Query: 468 YAHHGHEEKAILLFEEMLEK-GIKPDAVTFVAILSAFRHCGSV 509
Y HG+ +A+LLF + KP+ +++ A G++
Sbjct: 128 YTQHGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNL 170
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 175/627 (27%), Positives = 309/627 (49%), Gaps = 81/627 (12%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
NVF+ +++ K + A +FD P +DLV++N+++ G+ + G+ AL+L + M
Sbjct: 181 NVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGF-SQNGFAKKALELVLRM 239
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFA-----VSSLIDM 169
Q DE R D T+ + L + + G+ +H + ++ +GFA ++L DM
Sbjct: 240 Q--DEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIR-----AGFAKLVNISTALADM 292
Query: 170 YSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNT 229
YSKC E A +F+G ++ VSWN+
Sbjct: 293 YSKCGSVETARLIFDGMDQKT---------------------------------VVSWNS 319
Query: 230 LISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG 289
++ GYVQNG+ E+ + +F +M E G+ T AL AC L +++ K +H +V +
Sbjct: 320 MMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLN 379
Query: 290 LISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFD 349
L S+ V + ++ +Y KC+ ++ A + F+
Sbjct: 380 LGSDISVMNSLISMYSKCKRVDIASDI-------------------------------FN 408
Query: 350 SLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALH 409
+L + V W A+ GY + + SE + G+ D+ +V ++ A A +
Sbjct: 409 NLNGRTHVSWNAMILGYAQNGRVSEALNCFSE-MKSLGMKPDSFTMVSVIPALAELSVTR 467
Query: 410 PGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYA 469
K IH I+R + + + + LVDMYSKCG + A +F +R ++ +N MI Y
Sbjct: 468 HAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYG 527
Query: 470 HHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPET 529
HG A+ LF++M + ++P+ +T+++++SA H G V+ G ++F SM DY + P
Sbjct: 528 THGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSM 587
Query: 530 DHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLR 589
DHY M+DL GRA ++++A +F++++P + G+ C++++N E+ +A +KL
Sbjct: 588 DHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFE 647
Query: 590 LEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDV 649
L + +V LAN+YA+ W+++ +RK M + GCS V + +E+H F G
Sbjct: 648 LNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGST 707
Query: 650 SHPKTNAIYSVLAIFTGELYEIAGAFY 676
+HP++ IY+ L +YEI A Y
Sbjct: 708 THPQSKRIYAFLEEL---VYEIKAAGY 731
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 138/548 (25%), Positives = 238/548 (43%), Gaps = 111/548 (20%)
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
++S K + +A +F+ K Y++ML GY E AL M+ D +
Sbjct: 87 LVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLET-ALAFLCRMRYDD--V 143
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+ + T L +C ++ G+++H ++ S A+ FA++ +++MY+KCR ++A +
Sbjct: 144 KPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYK 203
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F+ R PE D VSWNT+I+G+ QNG A+
Sbjct: 204 MFD--------------------------------RMPE-RDLVSWNTIIAGFSQNGFAK 230
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
+ L+L +RM + G R + T + L A + + K IH + ++ G +S+ +
Sbjct: 231 KALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALA 290
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D+Y KC G++E AR FD + +K VV W +
Sbjct: 291 DMYSKC-------------------------------GSVETARLIFDGMDQKTVVSWNS 319
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+ GYV+ E + E + +EG+ + ++ L ACA L GK +H ++ ++
Sbjct: 320 MMDGYVQNGEPEKAIAVF-EKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQL 378
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
+ D ++++L+ MYSKC + A IF N R V +N MI YA +G +A+ F
Sbjct: 379 NLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCF 438
Query: 482 EEMLEKGIKPDAVTFVAILSAF------RH-----------------------------C 506
EM G+KPD+ T V+++ A RH C
Sbjct: 439 SEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKC 498
Query: 507 GSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF---MKSIPTEEDAVI 563
G++ M K F+ ++ + I+ + MID YG A++ MK E + +
Sbjct: 499 GAIHMARKLFDMISDRHVIT-----WNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDIT 553
Query: 564 LGSFLNVC 571
S ++ C
Sbjct: 554 YLSVISAC 561
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 174/375 (46%), Gaps = 38/375 (10%)
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
+ +V+ + G + A + F + DA+ ++T++ GY +N E L RM +
Sbjct: 84 QTKLVSLFSKYGSINEAARVFEPIDDKLDAL-YHTMLKGYAKNSSLETALAFLCRMRYDD 142
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
V+ + F L C ++K KEIH ++ N +N F +G+V++Y KC ++
Sbjct: 143 VKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQID--- 199
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEA 374
+A + FD + E+++V W + +G+ + +
Sbjct: 200 ----------------------------DAYKMFDRMPERDLVSWNTIIAGFSQNGFAKK 231
Query: 375 LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLV 434
+L+ + EG D++ LV +L A A L GK IH Y +R G + + L
Sbjct: 232 ALELVLR-MQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALA 290
Query: 435 DMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAV 494
DMYSKCG++ A +IF ++ +V +N M+ Y +G EKAI +FE+MLE+GI P V
Sbjct: 291 DMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGV 350
Query: 495 TFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKS 554
T + L A G +E G K+ + + + +I +Y + +++ A + +
Sbjct: 351 TIMEALHACADLGDLERG-KFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNN 409
Query: 555 IPTEE----DAVILG 565
+ +A+ILG
Sbjct: 410 LNGRTHVSWNAMILG 424
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 107/482 (22%), Positives = 186/482 (38%), Gaps = 105/482 (21%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H AI+AG + L +YSK + +R +FD M ++ V SWN+++ ++
Sbjct: 271 HGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQ---- 326
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+ P K + + ML I+ G T+ L
Sbjct: 327 -------NGEPEKAIAVFEKMLEEGIDPTG-----------------------VTIMEAL 356
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C L ++ G+ +H F+ + + + ++SLI MYSKC+ + A +F +
Sbjct: 357 HACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTH- 415
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+S NAM I GY QNG E L F M
Sbjct: 416 VSWNAM--------------------------------ILGYAQNGRVSEALNCFSEMKS 443
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G++ + T S + A L + AK IH ++++ L N FV++ +VD+Y KC
Sbjct: 444 LGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKC----- 498
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G + AR+ FD +++++V+ W A+ GY
Sbjct: 499 --------------------------GAIHMARKLFDMISDRHVITWNAMIDGYGTHGLG 532
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG-KEIHAYILRMGVQMDKKLIS 431
A DL + + K V + + + ++ AC+ + G + + G++
Sbjct: 533 RAALDLFDK-MKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYG 591
Query: 432 TLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMI-ACYAHHG---HEEKAILLFEEMLE 486
+VD+ + G + A +N I + +Y AC H E+ A LFE +
Sbjct: 592 AMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPD 651
Query: 487 KG 488
+G
Sbjct: 652 EG 653
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 116/271 (42%), Gaps = 42/271 (15%)
Query: 315 SMLLLKGVRNSFSISSMIVG-YSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE 373
+++ G+ N + +V +S G++ EA R F+ + +K ++ + GY K + E
Sbjct: 70 PLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLE 129
Query: 374 ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL 433
L + + V LL C A L GKEIH ++ + ++ +
Sbjct: 130 TALAFLCR-MRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGV 188
Query: 434 VDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDA 493
V+MY+KC + A +F ERDLV +N +IA ++ +G +KA+ L M ++G +PD+
Sbjct: 189 VNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDS 248
Query: 494 VTFVAILSA-----------------------------------FRHCGSVEMGEKYFNS 518
+T V +L A + CGSVE F+
Sbjct: 249 ITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDG 308
Query: 519 MTADYKISPETDHYACMIDLYGRANQLEKAI 549
M +S + M+D Y + + EKAI
Sbjct: 309 MDQKTVVS-----WNSMMDGYVQNGEPEKAI 334
>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
Length = 1021
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 215/731 (29%), Positives = 343/731 (46%), Gaps = 149/731 (20%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNV---------------- 56
H A+K GL + LI++Y KH + +++K+FD E+N+
Sbjct: 347 HATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQ 406
Query: 57 -------------------FSWNTIISACIK--SHDLKQ--------------------- 74
F++ +++ ACI S DL +
Sbjct: 407 EETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAM 466
Query: 75 ------------ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
A++LF P KD V++N+++ G + E E +A+ + M+ I
Sbjct: 467 LDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNE-EEGEAINMLKRMKFYG--IA 523
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVK---TSNDASGFAVSSLIDMYSKCRCYEEA 179
+DE + + +N C + + G+Q+H+ +K SN A G SSLID+YSK
Sbjct: 524 LDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVG---SSLIDLYSKF------ 574
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
G++E + K + + V N LI+G VQN
Sbjct: 575 --------------------------GDVESSRKVL-AHVDASSIVPINALITGLVQNNR 607
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
+E ++LF ++ ++G + + TF S LS C + K++H + LK+ ++ N S G
Sbjct: 608 EDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAIL-NQDTSLG 666
Query: 300 I--VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVV 357
I V +Y KC+ + A +L EE H KN+V
Sbjct: 667 ISLVGIYLKCKLLEDANKLL------------------------EEVPDH------KNLV 696
Query: 358 VWTALFSGYVKAQNCEALFDLLSEFVTKE-GVVTDALILVILLGACALQAALHPGKEIHA 416
WTA SGY AQN ++ L+ + + V +D +L AC+ AAL GKEIH
Sbjct: 697 EWTATISGY--AQNGYSVQSLVMFWRMRSYDVRSDEATFTSVLKACSEMAALTDGKEIHG 754
Query: 417 YILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER-DLVLYNVMIACYAHHGHEE 475
I++ G + S L+DMYSKCG++ + IF+ R +++ +N MI +A +G+
Sbjct: 755 LIVKSGFVSYETATSALMDMYSKCGDVISSFEIFKELKNRQNIMPWNSMIVGFAKNGYAN 814
Query: 476 KAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACM 535
+A+LLF++M E IKPD VT + +L A H G + G +F+SM+ Y I P DHYAC+
Sbjct: 815 EALLLFQKMQESQIKPDDVTLLGVLIACSHAGLISEGLHFFDSMSQVYGIVPRVDHYACL 874
Query: 536 IDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNK 595
IDL GR L+KA E + +P D VI ++L C+++++ E A +KL+ +E +
Sbjct: 875 IDLLGRGGHLQKAQEVIDQLPFRADGVIWATYLAACQMHKDEERGKVAAKKLVEMEPQSS 934
Query: 596 ARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTN 655
+ YV L++++AA GNW E R+ MR +F GCSW+ V ++ +F V D HP
Sbjct: 935 STYVFLSSLHAAAGNWVEAKVAREAMREKGVMKFPGCSWITVGNKQSVFVVQDTHHPDAL 994
Query: 656 AIYSVLAIFTG 666
+IY +L TG
Sbjct: 995 SIYKMLDDLTG 1005
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 133/557 (23%), Positives = 248/557 (44%), Gaps = 75/557 (13%)
Query: 18 KAGLTLTTITTNQLIHIYSKHNLLRESRKL----FDEMPERNVFSWNTIISACIKSHDLK 73
K GL T T ++ + E R++ + NVF +++I+ +K +
Sbjct: 317 KQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCIS 376
Query: 74 QARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLN 133
A+ +FD S K++V +N++L G++ E E + +++F M+ AD + D+FT S L
Sbjct: 377 DAKKVFDFSTEKNIVMWNAILYGFVQNELQE-ETIQMFQYMRRAD--LEADDFTFVSVLG 433
Query: 134 LCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLI 193
C+ L ++ GRQ+H +K DA F ++++DMYSK
Sbjct: 434 ACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKL-------------------- 473
Query: 194 SKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGEN 253
G +++A F P + D+VSWN LI G N + E + + RM
Sbjct: 474 ------------GAIDVAKALFSLIP-VKDSVSWNALIVGLAHNEEEGEAINMLKRMKFY 520
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA 313
G+ +E +FA+A++AC + ++ K+IHS +K + SN V S ++D+Y K
Sbjct: 521 GIALDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKF------ 574
Query: 314 ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE 373
G++E +R+ + ++V AL +G V+ +
Sbjct: 575 -------------------------GDVESSRKVLAHVDASSIVPINALITGLVQNNRED 609
Query: 374 ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV-QMDKKLIST 432
+L + V K+G +L C + GK++H Y L+ + D L +
Sbjct: 610 EAIELFQQ-VLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLGIS 668
Query: 433 LVDMYSKCGNMTYAEIIFQNFIE-RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
LV +Y KC + A + + + ++LV + I+ YA +G+ +++++F M ++
Sbjct: 669 LVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDVRS 728
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
D TF ++L A ++ G++ + +S ET A M D+Y + + + E
Sbjct: 729 DEATFTSVLKACSEMAALTDGKEIHGLIVKSGFVSYETATSALM-DMYSKCGDVISSFEI 787
Query: 552 MKSIPTEEDAVILGSFL 568
K + ++ + S +
Sbjct: 788 FKELKNRQNIMPWNSMI 804
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 225/491 (45%), Gaps = 72/491 (14%)
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
D+F + L+ C +L + GRQ+H ++K+ +S F + L+DMY+KC ++A R+F
Sbjct: 156 DQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVFCQAGLVDMYAKCGEVDDARRMF 215
Query: 184 EG--CTEEVNLISKNAMVAACCREGEMEMALKTFWRQ------PE--------------- 220
+G C + + S M+A R G + AL F R P+
Sbjct: 216 DGIACPDTICWTS---MIAGYHRVGRYQQALALFSRMEKMGSVPDQVTCVTIISTLASMG 272
Query: 221 -LNDA------------VSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALS 267
L DA V+WN +I+ Y Q+G E L+ M + G+ TFAS LS
Sbjct: 273 RLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILS 332
Query: 268 ACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFS 327
A + ++IH+ +K+GL +N FV S ++++Y K
Sbjct: 333 AAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVK--------------------- 371
Query: 328 ISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEG 387
G + +A++ FD TEKN+V+W A+ G+V+ + E + +++ +
Sbjct: 372 ----------HGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMF-QYMRRAD 420
Query: 388 VVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAE 447
+ D V +LGAC +L G+++H ++ G+ D + + ++DMYSK G + A+
Sbjct: 421 LEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAK 480
Query: 448 IIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCG 507
+F +D V +N +I AH+ E +AI + + M GI D V+F ++A +
Sbjct: 481 ALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIW 540
Query: 508 SVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSF 567
++E G K +S + Y + + +IDLY + +E + + + + I
Sbjct: 541 AIETG-KQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALI 599
Query: 568 LNVCRLNRNAE 578
+ + NR E
Sbjct: 600 TGLVQNNREDE 610
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 186/407 (45%), Gaps = 60/407 (14%)
Query: 230 LISGYVQNGDAEEGLKLFVRMG-ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKN 288
++S + ++G + L F R+ G ++ A LSAC L ++ +++H VLK+
Sbjct: 127 VLSCHARSGSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKS 186
Query: 289 GLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGY------------- 335
G S+ F +G+VD+Y KC ++ A M ++ +SMI GY
Sbjct: 187 GFCSSVFCQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALF 246
Query: 336 ----------------------SLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE 373
+ G + +AR + + V W A+ + Y ++
Sbjct: 247 SRMEKMGSVPDQVTCVTIISTLASMGRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDS 306
Query: 374 ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL 433
+F L + + K+G++ +L A A A G++IHA ++ G+ + + S+L
Sbjct: 307 EVFGLYKD-MKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSL 365
Query: 434 VDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDA 493
+++Y K G ++ A+ +F E+++V++N ++ + + +E+ I +F+ M ++ D
Sbjct: 366 INLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADD 425
Query: 494 VTFVAILSAFRHCGSVEMGEKYF-----NSMTADYKISPETDHYACMIDLYGRANQLEKA 548
TFV++L A + S+++G + N M AD ++ M+D+Y + ++ A
Sbjct: 426 FTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVA------NAMLDMYSKLGAIDVA 479
Query: 549 IEFMKSIPTEE----DAVILGSFLNVCRLNRNAELAGEAEEKLLRLE 591
IP ++ +A+I+G L N E GEA L R++
Sbjct: 480 KALFSLIPVKDSVSWNALIVG-------LAHNEE-EGEAINMLKRMK 518
>gi|15233050|ref|NP_191676.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|6850884|emb|CAB71047.1| putative protein [Arabidopsis thaliana]
gi|332646643|gb|AEE80164.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 783
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 199/703 (28%), Positives = 323/703 (45%), Gaps = 134/703 (19%)
Query: 24 TTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP 83
T + +N L+ SK + E+R++FD+MPER+ F+WNT+I A S L A LF S+P
Sbjct: 27 TKLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNP 86
Query: 84 HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGF 143
K+ +++N+++ GY + G + +A LF EMQS + I+ +E+T+ S L +C L+ +
Sbjct: 87 VKNTISWNALISGYCKS-GSKVEAFNLFWEMQS--DGIKPNEYTLGSVLRMCTSLVLLLR 143
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
G Q+H +KT D V+ L+ MY++C+ EA +FE
Sbjct: 144 GEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFE------------------T 185
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
EGE + V+W ++++GY QNG A + ++ F + G + N++TF
Sbjct: 186 MEGE--------------KNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFP 231
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
S L+AC + + ++H ++K+G +N +V S ++D+Y KC M A ++L V
Sbjct: 232 SVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVD 291
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV 383
+ S +SMIVG QG + EA F + E+++ +
Sbjct: 292 DVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKI------------------------- 326
Query: 384 TKEGVVTDALILVILLGACAL-QAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGN 442
D + +L AL + + H I++ G K + + LVDMY+K G
Sbjct: 327 -------DDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGI 379
Query: 443 MTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
M A +F+ IE+D++ + ++ H+G ++A+ LF M GI PD + ++LSA
Sbjct: 380 MDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSA 439
Query: 503 -----------------------------------FRHCGSVEMGEKYFNSMTAD----- 522
+ CGS+E FNSM
Sbjct: 440 SAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITW 499
Query: 523 --------------------------YKISPETDHYACMIDLYGRANQLEKAIEFMKSIP 556
Y I+P +HYACMIDL+GR+ K + + +
Sbjct: 500 TCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQME 559
Query: 557 TEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGR 616
E DA + + L R + N E A + L+ LE NN YVQL+N+Y+A G E
Sbjct: 560 VEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAAN 619
Query: 617 IRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYS 659
+R+ M+ ++ GCSWV + ++H F D HP+ IYS
Sbjct: 620 VRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYS 662
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 150/340 (44%), Gaps = 68/340 (20%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K+G + LI +Y+K + +R L + M +V SWN++I C++
Sbjct: 250 HCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVR---- 305
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+G +AL +F M D +++D+FT+ S L
Sbjct: 306 ----------------------------QGLIGEALSMFGRMHERD--MKIDDFTIPSIL 335
Query: 133 N-LCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
N + + H +VKT ++L+DMY+K + A +VFEG E+ +
Sbjct: 336 NCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEK-D 394
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
+IS A+V +G NG +E LKLF M
Sbjct: 395 VISWTALV--------------------------------TGNTHNGSYDEALKLFCNMR 422
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
G+ ++ AS LSA L ++ +++H +K+G S+ V++ +V +Y KC ++
Sbjct: 423 VGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLE 482
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL 351
A + +R+ + + +IVGY+ G +E+A+R+FDS+
Sbjct: 483 DANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSM 522
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 67/245 (27%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
+K A H +K G + N L+ +Y+K ++ + K+F+ M E++V SW +++
Sbjct: 345 MKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTG 404
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
+H+ G +ALKLF M+ I D+
Sbjct: 405 --NTHN------------------------------GSYDEALKLFCNMRVGG--ITPDK 430
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
S L+ +L + FG+Q+H +K+ +S +SL+ MY+KC E+A +F
Sbjct: 431 IVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIF-- 488
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
N+M E+ D ++W LI GY +NG E+ +
Sbjct: 489 ----------NSM---------------------EIRDLITWTCLIVGYAKNGLLEDAQR 517
Query: 246 LFVRM 250
F M
Sbjct: 518 YFDSM 522
>gi|297823509|ref|XP_002879637.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325476|gb|EFH55896.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 193/621 (31%), Positives = 316/621 (50%), Gaps = 30/621 (4%)
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
I++ KS + AR +FD +D V +N+ML Y + G +A+ LF +++ +D +
Sbjct: 11 IASLAKSGRITSARQMFDEMTDRDTVAWNTMLTSYSHL-GLHQEAIALFTQLRFSDS--K 67
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
D+++ T+ L+ C L NV GR++ + ++++ AS +SLIDMY KC A +V
Sbjct: 68 PDDYSFTAILSTCGSLGNVRLGRKIQSLVIRSGFCASSPVNNSLIDMYGKCSDTLSANKV 127
Query: 183 FEG-CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
F C N ++ +++ A + E AL F P+ +WN +ISG+ Q G E
Sbjct: 128 FRDMCCHSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPK-RVPFAWNIMISGHAQCGKIE 186
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
L+LF M E+ + TF+S ++AC NV +H+ +++NG S + ++
Sbjct: 187 SCLRLFKEMLESEFEPDCFTFSSLMNACADSSNVVYGWMVHAVMVRNGWYSAVEAKNSVL 246
Query: 302 DVY----CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVV 357
Y CK + M ES+ +L V S +S+I G ++A F EKN+V
Sbjct: 247 SFYAKLGCKDDVMRELESIEVLTQV----SWNSIIDACVKVGETDKALEVFRLAPEKNIV 302
Query: 358 VWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
WT + +GY + + E E + K GV +D +L AC+ A L GK IH
Sbjct: 303 TWTTMIAGYGRNGDGEQALRFFVEMM-KSGVDSDHFAYGAVLHACSGLALLGHGKMIHGC 361
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
++ G Q + + LV++Y+KCG++ + F + +DLV +N M+ + HG ++A
Sbjct: 362 LIHCGFQGYAYVGNALVNLYAKCGDIKESNRAFGDIANKDLVSWNTMLFAFGVHGLADQA 421
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID 537
+ L++ M+ GIKPD VTF+ +L+ H G VE G F SM DY I E DH CMID
Sbjct: 422 LELYDNMIASGIKPDNVTFIGLLTTCSHSGLVEKGCAIFESMVKDYGIPLEVDHVTCMID 481
Query: 538 LYGRANQLEKAIEFMKSIPTEEDAVILG--------SFLNVCRLNRNAELAGEAEEKLLR 589
++GR L +A K + T +++++ + L C + + EL E + L
Sbjct: 482 MFGRGGHLAEA----KDLATTYNSLVINASNNSSWEALLGACSTHWHTELGREVSKVLKI 537
Query: 590 LEGNNKARYVQLANVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVG 647
E + + +V L+N+Y + G W E +R++M RGM+ + GCSW+ V + + F VG
Sbjct: 538 AEPSEELSFVLLSNLYCSSGRWKEAEEVRREMVERGMR--KTPGCSWIEVGNRVSTFVVG 595
Query: 648 DVSHPKTNAIYSVLAIFTGEL 668
SHP+ + L E+
Sbjct: 596 GSSHPRLEELSETLNCLQHEM 616
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 211/435 (48%), Gaps = 42/435 (9%)
Query: 17 IKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEM--PERNVFSWNTIISACIKSHDLKQ 74
I++G ++ N LI +Y K + + K+F +M RN +W +++ A + + +
Sbjct: 97 IRSGFCASSPVNNSLIDMYGKCSDTLSANKVFRDMCCHSRNEVTWCSLLFAYMNAEQFEA 156
Query: 75 ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNL 134
A +F P + +N M+ G+ E+ L+LF EM ++ D FT +S +N
Sbjct: 157 ALDVFVEMPKRVPFAWNIMISGHAQCGKIES-CLRLFKEMLESE--FEPDCFTFSSLMNA 213
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
C NV +G +HA MV+ ++ A +S++ Y+K C ++ R E E + +S
Sbjct: 214 CADSSNVVYGWMVHAVMVRNGWYSAVEAKNSVLSFYAKLGCKDDVMRELES-IEVLTQVS 272
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
N+++ AC + GE + AL+ F PE N V+W T+I+GY +NGD E+ L+ FV M ++G
Sbjct: 273 WNSIIDACVKVGETDKALEVFRLAPEKN-IVTWTTMIAGYGRNGDGEQALRFFVEMMKSG 331
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
V + + + L AC GL + K IH ++ G +V + +V++Y KC
Sbjct: 332 VDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKC------- 384
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW-TALFSGYVKAQNCE 373
G+++E+ R F + K++V W T LF+ V +
Sbjct: 385 ------------------------GDIKESNRAFGDIANKDLVSWNTMLFAFGVHGLADQ 420
Query: 374 ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR-MGVQMDKKLIST 432
AL L + + G+ D + + LL C+ + G I +++ G+ ++ ++
Sbjct: 421 AL--ELYDNMIASGIKPDNVTFIGLLTTCSHSGLVEKGCAIFESMVKDYGIPLEVDHVTC 478
Query: 433 LVDMYSKCGNMTYAE 447
++DM+ + G++ A+
Sbjct: 479 MIDMFGRGGHLAEAK 493
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 127/279 (45%), Gaps = 40/279 (14%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTI 62
S N+ + H ++ G N ++ Y+K + + + + SWN+I
Sbjct: 217 SSNVVYGWMVHAVMVRNGWYSAVEAKNSVLSFYAKLGCKDDVMRELESIEVLTQVSWNSI 276
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGY-INAEGYEADALKLFIEMQSADEHI 121
I AC+K + +A +F +P K++VT+ +M+ GY N +G + AL+ F+EM + +
Sbjct: 277 IDACVKVGETDKALEVFRLAPEKNIVTWTTMIAGYGRNGDGEQ--ALRFFVEMMKSG--V 332
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
D F + L+ C L +G G+ +H ++ + ++L+++Y+KC +E+ R
Sbjct: 333 DSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKESNR 392
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
F ++A K D VSWNT++ + +G A+
Sbjct: 393 AFG------------------------DIANK---------DLVSWNTMLFAFGVHGLAD 419
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSAC--CGLRNVKCA 278
+ L+L+ M +G++ + TF L+ C GL CA
Sbjct: 420 QALELYDNMIASGIKPDNVTFIGLLTTCSHSGLVEKGCA 458
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 91/211 (43%), Gaps = 40/211 (18%)
Query: 328 ISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA---QNCEALFDLLSEFVT 384
++S I + G + AR+ FD +T+++ V W + + Y Q ALF L +
Sbjct: 7 LTSKIASLAKSGRITSARQMFDEMTDRDTVAWNTMLTSYSHLGLHQEAIALFTQLRFSDS 66
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
K D +L C + G++I + ++R G + ++L+DMY KC +
Sbjct: 67 K----PDDYSFTAILSTCGSLGNVRLGRKIQSLVIRSGFCASSPVNNSLIDMYGKCSDTL 122
Query: 445 YAEIIFQN------------------------------FIE---RDLVLYNVMIACYAHH 471
A +F++ F+E R +N+MI+ +A
Sbjct: 123 SANKVFRDMCCHSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVPFAWNIMISGHAQC 182
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
G E + LF+EMLE +PD TF ++++A
Sbjct: 183 GKIESCLRLFKEMLESEFEPDCFTFSSLMNA 213
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
+L S + + +K G +T A +F +RD V +N M+ Y+H G ++AI LF ++
Sbjct: 6 RLTSKIASL-AKSGRITSARQMFDEMTDRDTVAWNTMLTSYSHLGLHQEAIALFTQLRFS 64
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
KPD +F AILS G+V +G K S+ + +ID+YG+ +
Sbjct: 65 DSKPDDYSFTAILSTCGSLGNVRLGRK-IQSLVIRSGFCASSPVNNSLIDMYGKCSD 120
>gi|255559617|ref|XP_002520828.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539959|gb|EEF41537.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 656
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 196/633 (30%), Positives = 313/633 (49%), Gaps = 79/633 (12%)
Query: 41 LRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINA 100
++E+RK+FDEMP R+ S+ ++I+ +K+ DL QA LF P +++V ++M+ GY+ A
Sbjct: 67 VKEARKVFDEMPRRDAVSYASMITVYLKNKDLPQAEILFREIPERNVVADSAMISGYVRA 126
Query: 101 EGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVG-----FGRQLHAFMVKTS 155
G A ++F D+ + + F+ TS ++ K+ NV F + +V +
Sbjct: 127 -GRLDKARQVF------DQMVERNVFSWTSLVSGYFKIGNVDEAMRLFNQMPEKNVVSWT 179
Query: 156 NDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTF 215
G+A + ID EA +F E+ N+I+ AMV + E++ A + F
Sbjct: 180 TAVVGYAQNGFID---------EARDIFNQMPEK-NIIAWTAMVKSYVENDEIDEAFELF 229
Query: 216 WRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE-NGVRWNEHTFASALSACCGLRN 274
++ P+ N SWN +ISG + E ++LF M + N V W T + L+
Sbjct: 230 YQMPQRN-LYSWNIMISGCINANRLNEAIQLFNSMPQRNEVSWT--TLVTGLA------- 279
Query: 275 VKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVG 334
+NG+ M A ++ + ++MI
Sbjct: 280 ------------RNGM-------------------MELARKYFDHMPTKDIAAWNAMITA 308
Query: 335 YSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK----AQNCEALFDLL-SEFVTKEGVV 389
Y QG+M EA F+ + EKN+V W AL GY + + + L +L S F E +
Sbjct: 309 YVDQGSMAEASNLFNLMPEKNIVSWNALIDGYARNGPESNSLRYLILMLRSNFKPNETTI 368
Query: 390 TDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEII 449
T +L AC L + H ++ +G + DK L + LV YS+CG++ A I
Sbjct: 369 TS------VLTACDSILELM---QAHGLVIHLGFEQDKVLANGLVTTYSRCGDVLSARFI 419
Query: 450 FQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSV 509
F +D+V + MI Y++HG A+ +F ML G KPD +TFV +LSA H G V
Sbjct: 420 FDQLEIKDIVSWTAMILAYSNHGCGPHALQVFARMLRSGAKPDGITFVGLLSACSHAGLV 479
Query: 510 EMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE-DAVILGSFL 568
+ G+ F+SM+ Y + P +HY+C++D+ GRA ++ KA++ + +P E D +LG+ L
Sbjct: 480 KKGQMLFDSMSCAYGVEPRAEHYSCLVDILGRAGEMNKAMKVVSEMPPHECDGAVLGALL 539
Query: 569 NVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNR 628
CRL+++ LA EKL+ E + YV LAN YAA G W E +RK+M+ +
Sbjct: 540 GACRLHKDVGLANHIGEKLIEKEPTSSGSYVLLANAYAACGKWNEFAEVRKEMKERNVKK 599
Query: 629 FAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
G S + V+ + H+F V D SHP+ IY L
Sbjct: 600 EPGFSQIEVKGKSHVFFVRDRSHPQLEEIYLFL 632
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 111/480 (23%), Positives = 202/480 (42%), Gaps = 91/480 (18%)
Query: 35 YSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSML 94
Y+++ + E+R +F++MPE+N+ +W ++ + +++ ++ +A LF P ++L ++N M+
Sbjct: 185 YAQNGFIDEARDIFNQMPEKNIIAWTAMVKSYVENDEIDEAFELFYQMPQRNLYSWNIMI 244
Query: 95 CGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKT 154
G INA +A++LF M +E V
Sbjct: 245 SGCINANRLN-EAIQLFNSMPQRNE--------------------------------VSW 271
Query: 155 SNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKT 214
+ +G A + ++++ A + F+ + ++ + NAM+ A +G M A
Sbjct: 272 TTLVTGLARNGMMEL---------ARKYFDHMPTK-DIAAWNAMITAYVDQGSMAEASNL 321
Query: 215 FWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRN 274
F PE N VSWN LI GY +NG L+ + M + + NE T S L+AC +
Sbjct: 322 FNLMPEKN-IVSWNALIDGYARNGPESNSLRYLILMLRSNFKPNETTITSVLTACDSILE 380
Query: 275 VKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVG 334
+ A H V+ G + +++G+V Y +C
Sbjct: 381 LMQA---HGLVIHLGFEQDKVLANGLVTTYSRC--------------------------- 410
Query: 335 YSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALI 394
G++ AR FD L K++V WTA+ Y + + + + G D +
Sbjct: 411 ----GDVLSARFIFDQLEIKDIVSWTAMILAYSNHGCGPHALQVFARML-RSGAKPDGIT 465
Query: 395 LVILLGACALQAALHPGKEI-HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF 453
V LL AC+ + G+ + + GV+ + S LVD+ + G M A +
Sbjct: 466 FVGLLSACSHAGLVKKGQMLFDSMSCAYGVEPRAEHYSCLVDILGRAGEMNKAMKVVSEM 525
Query: 454 IERD---LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAV---TFVAILSAFRHCG 507
+ VL ++ AC H K + L + EK I+ + ++V + +A+ CG
Sbjct: 526 PPHECDGAVLGALLGACRLH-----KDVGLANHIGEKLIEKEPTSSGSYVLLANAYAACG 580
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 118/305 (38%), Gaps = 99/305 (32%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQ----------- 74
I ++ Y +++ + E+ +LF +MP+RN++SWN +IS CI ++ L +
Sbjct: 207 IAWTAMVKSYVENDEIDEAFELFYQMPQRNLYSWNIMISGCINANRLNEAIQLFNSMPQR 266
Query: 75 --------------------ARSLFDSSPHKDLVTYNSMLCGYINA-------------- 100
AR FD P KD+ +N+M+ Y++
Sbjct: 267 NEVSWTTLVTGLARNGMMELARKYFDHMPTKDIAAWNAMITAYVDQGSMAEASNLFNLMP 326
Query: 101 -----------EGY-----EADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
+GY E+++L+ I M ++ + +E T+TS L C +L +
Sbjct: 327 EKNIVSWNALIDGYARNGPESNSLRYLILMLRSN--FKPNETTITSVLTACDSILEL--- 381
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
Q H ++ + + L+ YS+C A +F+
Sbjct: 382 MQAHGLVIHLGFEQDKVLANGLVTTYSRCGDVLSARFIFD-------------------- 421
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFAS 264
Q E+ D VSW +I Y +G L++F RM +G + + TF
Sbjct: 422 -------------QLEIKDIVSWTAMILAYSNHGCGPHALQVFARMLRSGAKPDGITFVG 468
Query: 265 ALSAC 269
LSAC
Sbjct: 469 LLSAC 473
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 108/231 (46%), Gaps = 22/231 (9%)
Query: 332 IVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTD 391
I L+G ++EAR+ FD + ++ V + ++ + Y+K ++ L E + + VV D
Sbjct: 58 ISNLGLRGKVKEARKVFDEMPRRDAVSYASMITVYLKNKDLPQAEILFRE-IPERNVVAD 116
Query: 392 ALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQ 451
+ ++ + A L A + V+ + ++LV Y K GN+ A +F
Sbjct: 117 SAMISGYVRAGRLDKARQ--------VFDQMVERNVFSWTSLVSGYFKIGNVDEAMRLFN 168
Query: 452 NFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEM 511
E+++V + + YA +G ++A +F +M EK I + + A++ ++ ++
Sbjct: 169 QMPEKNVVSWTTAVVGYAQNGFIDEARDIFNQMPEKNI----IAWTAMVKSYVENDEIDE 224
Query: 512 GEKYFNSMTADYKISPETDHYACMIDLYG--RANQLEKAIEFMKSIPTEED 560
+ F M P+ + Y+ I + G AN+L +AI+ S+P +
Sbjct: 225 AFELFYQM-------PQRNLYSWNIMISGCINANRLNEAIQLFNSMPQRNE 268
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 179/618 (28%), Positives = 302/618 (48%), Gaps = 69/618 (11%)
Query: 54 RNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIE 113
++ + N ++ + + + A +F +PH ++ YN+++ G ++ + + DA+ ++
Sbjct: 33 QDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRGMVSNDAFR-DAVSVYAS 91
Query: 114 MQSADEHIRMDEFTVTSTLNLCVKLLN-VGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
M+ D FT L C +L + G LH+ ++KT D F + L+ +YSK
Sbjct: 92 MRQ--HGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSK 149
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
G + A K F PE N VSW +I
Sbjct: 150 --------------------------------NGFLTDARKVFDEIPEKN-VVSWTAIIC 176
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
GY+++G E L LF + E G+R + T L AC + ++ + I ++ ++G +
Sbjct: 177 GYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVG 236
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
N FV++ +VD+Y KC G+MEEARR FD +
Sbjct: 237 NVFVATSLVDMYAKC-------------------------------GSMEEARRVFDGMV 265
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
EK+VV W+AL GY + D+ E + +E V D +V + AC+ AL G
Sbjct: 266 EKDVVCWSALIQGYASNGMPKEALDVFFE-MQRENVRPDCYAMVGVFSACSRLGALELGN 324
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
+ + L + L+D Y+KCG++ A+ +F+ +D V++N +I+ A G
Sbjct: 325 WARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCG 384
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
H A +F +M++ G++PD TFV +L H G V+ G +YF+ M++ + ++P +HY
Sbjct: 385 HVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHY 444
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
CM+DL RA L +A + ++S+P E ++++ G+ L CRL+++ +LA ++L+ LE
Sbjct: 445 GCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQLAEHVLKQLIELEP 504
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
N YV L+N+Y+A W E +IR + + GCSWV V+ +H F VGD SHP
Sbjct: 505 WNSGHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLPGCSWVEVDGVVHEFLVGDTSHP 564
Query: 653 KTNAIYSVLAIFTGELYE 670
++ IY L +L E
Sbjct: 565 LSHKIYEKLESLFKDLRE 582
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 117/486 (24%), Positives = 195/486 (40%), Gaps = 113/486 (23%)
Query: 9 ALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIK 68
L H IK G L+ +YSK+ L ++RK+FDE+PE+NV SW II
Sbjct: 121 GLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAII----- 175
Query: 69 SHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLF---IEMQSADEHIRMDE 125
CGYI + G +AL LF +EM +R D
Sbjct: 176 --------------------------CGYIES-GCFGEALGLFRGLLEMG-----LRPDS 203
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
FT+ L C ++ ++ GR + +M ++ + + F +SL+DMY+KC EEA RVF+G
Sbjct: 204 FTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDG 263
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
E+ D V W+ LI GY NG +E L
Sbjct: 264 MVEK---------------------------------DVVCWSALIQGYASNGMPKEALD 290
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
+F M VR + + SAC L ++ + + +SNP + + ++D Y
Sbjct: 291 VFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYA 350
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
KC G++ +A+ F + K+ VV+ A+ SG
Sbjct: 351 KC-------------------------------GSVAQAKEVFKGMRRKDCVVFNAVISG 379
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM---- 421
+ A F + + V K G+ D V LL C + G H Y M
Sbjct: 380 LAMCGHVGAAFGVFGQMV-KVGMQPDGNTFVGLLCGCTHAGLVDDG---HRYFSGMSSVF 435
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKAILL 480
V + +VD+ ++ G + A+ + ++ +E + +++ ++ H + A +
Sbjct: 436 SVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQLAEHV 495
Query: 481 FEEMLE 486
++++E
Sbjct: 496 LKQLIE 501
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%)
Query: 407 ALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIA 466
+LH K+ H +LR+G+ D LI+ L+ YA ++F ++ LYN +I
Sbjct: 15 SLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIR 74
Query: 467 CYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
+ A+ ++ M + G PD TF +L A
Sbjct: 75 GMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKA 110
>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
Length = 1134
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 203/664 (30%), Positives = 315/664 (47%), Gaps = 107/664 (16%)
Query: 19 AGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSL 78
+G L IT+N LI +Y K + K+FD MPERNV SW ++S + + DL +
Sbjct: 398 SGSGLNLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGS--- 454
Query: 79 FDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKL 138
L LF EM + I +EFT ++ L C L
Sbjct: 455 -----------------------------LSLFTEM--GRQGIYPNEFTFSTNLKACGLL 483
Query: 139 LNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAM 198
+ G Q+H F +K + +SL+DMYSKC EA +VF +LIS NAM
Sbjct: 484 NALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRWMVGR-SLISWNAM 542
Query: 199 VAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWN 258
+A G AL TF G +Q +E R +
Sbjct: 543 IAGYVHAGYGSRALATF-----------------GMMQEAKIKE-------------RPD 572
Query: 259 EHTFASALSACCGLRNVKCAKEIHSWVLKNGL--ISNPFVSSGIVDVYCKCENMNYAESM 316
E T S L AC + K+IH +++++G S+ ++ +VD+Y KC
Sbjct: 573 EFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKC--------- 623
Query: 317 LLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN---CE 373
GN+ AR+ FD + EK ++ W++L GY + +
Sbjct: 624 ----------------------GNLFSARKAFDQIKEKTMISWSSLILGYAQEGDFVEAM 661
Query: 374 ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL 433
LF L E ++ D+ +L ++G A A L GK++ A ++++ ++ + ++L
Sbjct: 662 GLFKRLQELSSQ----IDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSGLETSVSNSL 717
Query: 434 VDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDA 493
VDMY KCG + AE F +D++ + VMI Y HG +KA+ +F +ML I+PD
Sbjct: 718 VDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIFNKMLRHNIEPDE 777
Query: 494 VTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMK 553
V ++A+LSA H G ++ GE+ F+ + I P +HYAC++DL GRA +L++A +
Sbjct: 778 VCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVDLLGRAGRLKEAKHLVD 837
Query: 554 SIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAE 613
++P + + I + L++CR++ + EL E + LLR++G N A YV ++N+Y G W E
Sbjct: 838 TMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDGKNPANYVMMSNLYGQAGYWNE 897
Query: 614 MGRIRKQMRGMKG-NRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
G R ++ +KG + AG SWV +E E+H F G+ SHP T I L L E
Sbjct: 898 QGNAR-ELGSIKGLQKEAGMSWVEIEREVHFFRSGEDSHPLTLVIQETLKEVERRLREEL 956
Query: 673 GAFY 676
G Y
Sbjct: 957 GYVY 960
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/476 (21%), Positives = 199/476 (41%), Gaps = 105/476 (22%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L++ L H +K G + N L+ +YSK + E+ K+F M R++ SW
Sbjct: 486 LEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRWMVGRSLISW------ 539
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
N+M+ GY++A GY + AL F MQ A R DE
Sbjct: 540 -------------------------NAMIAGYVHA-GYGSRALATFGMMQEAKIKERPDE 573
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSN--DASGFAVSSLIDMYSKCRCYEEACRVF 183
FT+TS L C + G+Q+H F+V++ +S SL+D+Y KC A + F
Sbjct: 574 FTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAF 633
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
+ E+ +IS ++++ +EG D E
Sbjct: 634 DQIKEK-TMISWSSLILGYAQEG--------------------------------DFVEA 660
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLK--NGLISNPFVSSGIV 301
+ LF R+ E + + +S + ++ K++ + V+K +GL ++ VS+ +V
Sbjct: 661 MGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSGLETS--VSNSLV 718
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D+Y KC G ++EA + F + K+V+ WT
Sbjct: 719 DMYLKC-------------------------------GLVDEAEKCFAEMQLKDVISWTV 747
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR- 420
+ +GY K + + ++ + + + D + + +L AC+ + G+E+ + +L
Sbjct: 748 MITGYGKHGLGKKAVSIFNKML-RHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLET 806
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEE 475
G++ + + +VD+ + G + A+ + I+ ++ ++ +++ HG E
Sbjct: 807 QGIKPRVEHYACVVDLLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIE 862
>gi|224057446|ref|XP_002299231.1| predicted protein [Populus trichocarpa]
gi|222846489|gb|EEE84036.1| predicted protein [Populus trichocarpa]
Length = 668
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 193/653 (29%), Positives = 308/653 (47%), Gaps = 79/653 (12%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESR------KLFDEMPERNVFSWNTIISAC 66
Q I GL L +++LI + + ESR K+ + + NVFSWN +I C
Sbjct: 73 QAQMILTGLILDGFASSRLISFCA----ISESRNLDYCIKILNNLQNPNVFSWNAVIRGC 128
Query: 67 IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEF 126
++S + P K LV Y ML R D +
Sbjct: 129 VESEN-----------PQKGLVLYKRML----------------------TRAGCRPDNY 155
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF-EG 185
T + +C L+ G ++ ++K D + + +I M A +VF EG
Sbjct: 156 TYSFLFKVCANLVLSYMGFEILGQVLKMGFDKDMYLYNGIIHMLVSVGESGLAHKVFDEG 215
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
C D VSWN+LI+GYV+ E +
Sbjct: 216 CVR----------------------------------DLVSWNSLINGYVRRRQPREAMG 241
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
++ +M V+ +E T +SAC L ++K +EIH ++ ++GL + + ++D+Y
Sbjct: 242 IYQQMITEHVKPDEVTMIGVVSACAQLESLKLGREIHRYIEESGLNLKISLVNALMDMYV 301
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
KC ++ + + + S ++MIVGY+ G ++ A + F + EKNVV W A+
Sbjct: 302 KCGDLEAGKVLFDNMRKKTVVSWTTMIVGYAKNGLLDMAGKLFHDMPEKNVVAWNAMIGS 361
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
V+A +L E + + D + ++ L AC+ AL G H YI + + +
Sbjct: 362 CVQANLSFEALELFRE-MQWSNMKPDKVTMLHCLSACSQLGALDTGMWTHNYIKKHNLSL 420
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
D L + L+DMY+KCGNMT A +F R+ + + +I A +G+ AI F +M+
Sbjct: 421 DVALGTALIDMYAKCGNMTKALQVFNEMPRRNSLTWTAIIGGLALYGNVNDAIFYFSKMI 480
Query: 486 EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQL 545
+ G+ PD +TF+ +L+A H G VE G KYF+ M + + +SP+ HY+CM++L GRA L
Sbjct: 481 DSGLMPDEITFLGVLTACCHGGLVEEGRKYFDQMKSRFNLSPQPKHYSCMVNLLGRAGLL 540
Query: 546 EKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVY 605
E+A E +K++P E DA++ G+ C ++RN + A KLL L+ ++ YV LAN+Y
Sbjct: 541 EEAEELIKTMPMEADAMVWGALFFACGIHRNLLIGERAASKLLDLDPHDSGIYVLLANMY 600
Query: 606 AAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
G W E IRK M + G S + V I+ F V D SHP++ IY
Sbjct: 601 REAGKWEEAQNIRKMMMERGVEKTPGSSSIEVNGIINEFIVRDKSHPQSEQIY 653
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 123/271 (45%), Gaps = 17/271 (6%)
Query: 282 HSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKG-VRNSFSISSMI--VGYSLQ 338
H++VL N L+S +++ + ++ ++L G + + F+ S +I S
Sbjct: 48 HTYVLSNPLLS-------LLENCKSFSQLKQIQAQMILTGLILDGFASSRLISFCAISES 100
Query: 339 GNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVIL 398
N++ + ++L NV W A+ G V+++N + L +T+ G D L
Sbjct: 101 RNLDYCIKILNNLQNPNVFSWNAVIRGCVESENPQKGLVLYKRMLTRAGCRPDNYTYSFL 160
Query: 399 LGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDL 458
CA + G EI +L+MG D L + ++ M G A +F RDL
Sbjct: 161 FKVCANLVLSYMGFEILGQVLKMGFDKDMYLYNGIIHMLVSVGESGLAHKVFDEGCVRDL 220
Query: 459 VLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE---KY 515
V +N +I Y +A+ ++++M+ + +KPD VT + ++SA S+++G +Y
Sbjct: 221 VSWNSLINGYVRRRQPREAMGIYQQMITEHVKPDEVTMIGVVSACAQLESLKLGREIHRY 280
Query: 516 FNSMTADYKISPETDHYACMIDLYGRANQLE 546
+ KIS ++D+Y + LE
Sbjct: 281 IEESGLNLKISLVN----ALMDMYVKCGDLE 307
>gi|297743088|emb|CBI35955.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 188/652 (28%), Positives = 332/652 (50%), Gaps = 28/652 (4%)
Query: 29 NQLIHIYSKHNLLRE-SRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP---H 84
N L+ SK +L ++ ++ R+ F ++S + A+ +F+ SP
Sbjct: 38 NDLLQQCSKSHLSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECF 97
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
+L+ +NS+L + A GY +AL+++ M+ + D FT + C + +
Sbjct: 98 SNLLLWNSILRANV-AHGYCEEALEIYCRMRKLG--VSADGFTFPLVIRACALMGSRKLC 154
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE-----GCTEEVNLISKNAMV 199
R +H +V+ + + L+ MY K ++A +VFE C ++S A+
Sbjct: 155 RSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALN 214
Query: 200 AACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNE 259
C EM + + +P L V+W +L+S + + G E ++LF RM G+
Sbjct: 215 YDCHGASEMFRMMGSAGLEPNL---VTWTSLLSSHARCGQHVETMELFGRMRMRGIGATA 271
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLL 319
A LS L K IH +V+K G + FV + ++ +Y K N+N A + L
Sbjct: 272 EALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLE 331
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSL--------TEKNVVVWTALFSGYVKAQN 371
+N S +++I Y+ G +EA F L NVV W+A+ G+
Sbjct: 332 IKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQ 391
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
E +L + V +++ + +L CA AALH G+EIH +++R + + + +
Sbjct: 392 GEEALELFRRMQLAK-VKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGN 450
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
L++MY+K G+ ++F+ +DL+ +N M+A Y HG E AI F++M++ G +P
Sbjct: 451 GLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEP 510
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
D VTFVA+LSA H G V G + F+ M ++++ P+ +HYACM+DL GRA L++A +
Sbjct: 511 DGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKV 570
Query: 552 MKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNW 611
+KS+P E +A + G+ LN CR+++N E+A E ++ L Y+ L+N+YAA G W
Sbjct: 571 VKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRW 630
Query: 612 AEMGRIR--KQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+ ++R + +G+K + G SW+ V+ ++++F+ G+ H + +Y +L
Sbjct: 631 EDSAKVRISAKTKGLK--KTPGQSWIQVKKKVYMFSAGNTQHAELEEVYRIL 680
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/478 (23%), Positives = 215/478 (44%), Gaps = 54/478 (11%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H ++ G N+L+ +Y K + ++RK+F+ M R+ SWNT++S ++D
Sbjct: 158 HGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDC 217
Query: 73 KQARSLF----DSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
A +F + +LVT+ S+L + G + ++LF M+ + V
Sbjct: 218 HGASEMFRMMGSAGLEPNLVTWTSLLSSHARC-GQHVETMELFGRMRMRGIGATAEALAV 276
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE 188
L++ V L G+ +H ++VK + F +SLI +Y K A R+ +
Sbjct: 277 --VLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGK-HGNVNAARILFLEIK 333
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELND-------AVSWNTLISGYVQNGDAE 241
N++S NA++++ G + A F + + ++ VSW+ +I G+ G E
Sbjct: 334 TKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGE 393
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E L+LF RM V+ N T AS LS C L + +EIH V+++ + N V +G++
Sbjct: 394 EALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLI 453
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSIS--SMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
++Y K + ++ E L+ + + N IS +M+ GY + G E A R FD +
Sbjct: 454 NMYTK--SGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQM-------- 503
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
K+G D + V +L AC+ + G+E+ ++
Sbjct: 504 ------------------------IKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMI 539
Query: 420 R-MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMI-ACYAHHGHE 474
+ V+ + + +VD+ + G + A + ++ +E + ++ ++ +C H E
Sbjct: 540 KEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTE 597
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 132/257 (51%), Gaps = 21/257 (8%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACI 67
E + H +K G N LI +Y KH + +R LF E+ +N+ SWN +IS+
Sbjct: 289 EGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYA 348
Query: 68 KSHDLKQARSLF------DSSP--HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
+A ++F D P ++V++++++ G+ ++G +AL+LF MQ A
Sbjct: 349 DLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFA-SKGQGEEALELFRRMQLAK- 406
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
++ + T+ S L++C +L + GR++H +V++ D + + LI+MY+K ++E
Sbjct: 407 -VKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEG 465
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWR------QPELNDAVSWNTLISG 233
VFE E +LIS N MVA G E A++TF + +P D V++ ++S
Sbjct: 466 NLVFEK-IENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEP---DGVTFVAVLSA 521
Query: 234 YVQNGDAEEGLKLFVRM 250
G EG +LF +M
Sbjct: 522 CSHAGLVAEGRELFDKM 538
>gi|225464746|ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic [Vitis vinifera]
Length = 825
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 185/590 (31%), Positives = 300/590 (50%), Gaps = 69/590 (11%)
Query: 75 ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNL 134
AR +FD ++ +N+M+ GY+ +A+ LF+++ +++ + +D+ T S L
Sbjct: 274 AREIFDCCLERNTEVWNTMIGGYVQ-NNCPIEAIDLFVQVMESEQFV-LDDVTFLSALTA 331
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
+L + GRQLHA+++K+S ++++I MYS+C + +VF E
Sbjct: 332 ISQLQWLELGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLER----- 386
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
D V+WNT++S +VQNG +EGL L M + G
Sbjct: 387 ----------------------------DVVTWNTMVSAFVQNGLDDEGLMLVFAMQKQG 418
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
+ T + LS LR+ + K+ H++++++G I + S ++D+Y K + A+
Sbjct: 419 FMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHG-IQFEGMDSYLIDMYAKSGLITTAQ 477
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEA 374
+ E +D ++ W A+ +GY + E
Sbjct: 478 QLF-------------------------EKNSDYD----RDEATWNAMIAGYTQNGLSEE 508
Query: 375 LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLV 434
F + + + ++ V +A+ L +L AC + GK+IH + +R + + + + L+
Sbjct: 509 GFAVFRKMI-EQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNRNVFVGTALL 567
Query: 435 DMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAV 494
DMYSK G +TYAE +F +E++ V Y MI+ Y HG E+A+ LF ML GIKPD+V
Sbjct: 568 DMYSKSGAITYAENVFAETLEKNSVTYTTMISSYGQHGMGERALSLFHAMLGSGIKPDSV 627
Query: 495 TFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKS 554
TFVAILSA + G V+ G + F SM +YKI P +HY C+ D+ GR ++ +A EF+K
Sbjct: 628 TFVAILSACSYAGLVDEGLRIFQSMEREYKIQPSAEHYCCVADMLGRVGRVVEAYEFVKG 687
Query: 555 IPTEEDAV-ILGSFLNVCRLNRNAELAGEAEEKLLRLE-GNNKARY-VQLANVYAAEGNW 611
+ E + I GS L CR++ EL KLL +E G++ Y V L+N+YAAEGNW
Sbjct: 688 LGEEGNTFGIWGSLLGACRIHGEFELGKVVANKLLEMEKGSSLTGYHVLLSNIYAAEGNW 747
Query: 612 AEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+ R+RK+MR + AGCSWV V ++ F D HP+ IY +L
Sbjct: 748 DNVDRVRKEMRQKGLMKEAGCSWVEVAGHVNCFMSRDHKHPQCAEIYQML 797
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 145/561 (25%), Positives = 254/561 (45%), Gaps = 62/561 (11%)
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
C + H QA LFDS P V +N+++ G+I DAL + M+ A + D
Sbjct: 48 CRQGHP-HQALHLFDSIPRPTTVLWNTIIIGFI-CNNMPIDALLFYARMR-ASPSPKFDS 104
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
+T +STL C + ++ G+ LH ++++ +S +SL++MYS
Sbjct: 105 YTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYST------------- 151
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
C EV + C ++ + F + N V+WNT+IS YV+ E K
Sbjct: 152 CLTEVPYLGTAYDFNNC------DLVRRVFDTMRKRN-VVAWNTMISWYVKTERLIEAFK 204
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
+F M G+R +F + A + + A ++ V+K G S VD +
Sbjct: 205 MFRTMMRMGIRPTPVSFVNVFPAVWRMSDYDNANVLYGLVVKLG--------SDFVDDF- 255
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
F +SS I Y+ G ++ AR FD E+N VW + G
Sbjct: 256 --------------------FVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGG 295
Query: 366 YVKAQNC--EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
YV+ NC EA+ DL + + E V D + + L A + L G+++HAYIL+
Sbjct: 296 YVQ-NNCPIEAI-DLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHAYILKSST 353
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
+ +++ ++ MYS+CG++ + +F N +ERD+V +N M++ + +G +++ ++L
Sbjct: 354 ILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFA 413
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRAN 543
M ++G D+VT A+LS + S E+G++ + D Y +ID+Y ++
Sbjct: 414 MQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMDSY--LIDMYAKSG 471
Query: 544 QLEKAIE-FMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLA 602
+ A + F K+ + D + + N +E K+ +E N + V LA
Sbjct: 472 LITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKM--IEQNVRPNAVTLA 529
Query: 603 NVYAAEGNWAEMGRIRKQMRG 623
++ A +G + KQ+ G
Sbjct: 530 SILPACNPMGTIG-LGKQIHG 549
>gi|326504712|dbj|BAK06647.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 658
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 193/643 (30%), Positives = 327/643 (50%), Gaps = 35/643 (5%)
Query: 13 HVQAIKAGLTLT-TITTNQLIHIYSKHNLLRE---SRKLFDEMPE--RNVFSWNTIISAC 66
H A K+GL + T N L+ Y++ + +R LFDE+P R+ + NT++++
Sbjct: 29 HALAAKSGLLASNTFVRNSLLAFYARLPSPQAPALARHLFDEIPLALRDPAAHNTLLASL 88
Query: 67 IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEF 126
++ L A+ + P +D V+Y ++L A G+ DA+ +F M + D + +E
Sbjct: 89 ARAGRLDLAQGMLAEMPQRDTVSYTTVLTALARA-GHAEDAVAVFRGMLAQD--VPPNEV 145
Query: 127 TVTSTLN-LCVKLLNVGFG--------RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYE 177
T+ L L ++ V G R L+ F++ +N +A +S + C+
Sbjct: 146 TLAGVLTALALERPPVPVGVAHGVTVRRGLNGFLIVATNLVHAYAAASQV-------CF- 197
Query: 178 EACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQN 237
A +FE ++ N ++ NAM+ + G + MA + F R PE DAVSW T+I GY++
Sbjct: 198 -AREIFEQMPDK-NTVTWNAMLNGYLKAGMLPMAAEVFGRIPE-RDAVSWLTIIDGYIRA 254
Query: 238 GDAEEGLKLFVRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFV 296
E L+ +V M E R N + C V +++H+ +LK+G ++PFV
Sbjct: 255 DCTSEALRAYVAMMAEVDTRGNAALLVDLIKVCARHAAVLEGQQLHTVILKDGFDAHPFV 314
Query: 297 SSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNV 356
+ ++ Y C+ ++ A L + S ++++ G + M EAR+ FD + E++
Sbjct: 315 QATLIHFYGSCDLLDIARMQFKLSDKSHIASWNALMSGLLHRNLMHEARQLFDDMPERDT 374
Query: 357 VVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHA 416
+ W+ L SGYV++ + L + GV + + L L A A L G+ IH
Sbjct: 375 ISWSTLLSGYVQSGHSNKALQLFY-LMLGAGVEPNDVTLASTLSAVADSGMLEQGRFIHD 433
Query: 417 YILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER--DLVLYNVMIACYAHHGHE 474
YI+ +Q+ L + L+DMY+KCG++ A +F + + + +N +I A HGH
Sbjct: 434 YIISNSIQLTDNLSAGLIDMYAKCGSVADAIQLFSHVKHKLSSVSPWNAIICSLAIHGHA 493
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC 534
++ LF E+ IKP++VT++ +L+A H G V G +F SM+ +Y I P HY C
Sbjct: 494 HTSLELFLELQRTNIKPNSVTYIGVLNACCHAGLVTEGRHHFESMSREYGIQPTIKHYGC 553
Query: 535 MIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNN 594
M+DL GRA LE+A ++ +P D VI GS L R + N L +A E+L +++ N+
Sbjct: 554 MVDLLGRAGHLEEAENLIQMMPMRSDVVIWGSILAAARTHGNVALGEKAAEELAKIDPNH 613
Query: 595 KARYVQLANVYAAEGNWAEMGRIRKQMRGMKGN--RFAGCSWV 635
A V L+N++A W + +RK+++ N RF+G S V
Sbjct: 614 GASKVALSNIFAEAARWNNVSLVRKELQDEDENMGRFSGSSGV 656
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/464 (25%), Positives = 224/464 (48%), Gaps = 36/464 (7%)
Query: 11 ICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSH 70
+ H ++ GL I L+H Y+ + + +R++F++MP++N +WN +++ +K+
Sbjct: 165 VAHGVTVRRGLNGFLIVATNLVHAYAAASQVCFAREIFEQMPDKNTVTWNAMLNGYLKAG 224
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
L A +F P +D V++ +++ GYI A+ ++AL+ ++ M A+ R + +
Sbjct: 225 MLPMAAEVFGRIPERDAVSWLTIIDGYIRAD-CTSEALRAYVAMM-AEVDTRGNAALLVD 282
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
+ +C + V G+QLH ++K DA F ++LI Y C + A F+ +++
Sbjct: 283 LIKVCARHAAVLEGQQLHTVILKDGFDAHPFVQATLIHFYGSCDLLDIARMQFK-LSDKS 341
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
++ S NA+++ M A + F PE D +SW+TL+SGYVQ+G + + L+LF M
Sbjct: 342 HIASWNALMSGLLHRNLMHEARQLFDDMPE-RDTISWSTLLSGYVQSGHSNKALQLFYLM 400
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
GV N+ T AS LSA ++ + IH +++ N + +S+G++D+Y KC ++
Sbjct: 401 LGAGVEPNDVTLASTLSAVADSGMLEQGRFIHDYIISNSIQLTDNLSAGLIDMYAKCGSV 460
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
A+++ L V++ S +V W A+
Sbjct: 461 --ADAIQLFSHVKHKLS---------------------------SVSPWNAIICSLAIHG 491
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR-MGVQMDKKL 429
+ +L E + + +++ + +L AC + G+ + R G+Q K
Sbjct: 492 HAHTSLELFLEL-QRTNIKPNSVTYIGVLNACCHAGLVTEGRHHFESMSREYGIQPTIKH 550
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIER-DLVLYNVMIACYAHHG 472
+VD+ + G++ AE + Q R D+V++ ++A HG
Sbjct: 551 YGCMVDLLGRAGHLEEAENLIQMMPMRSDVVIWGSILAAARTHG 594
>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Glycine max]
Length = 775
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 179/611 (29%), Positives = 312/611 (51%), Gaps = 66/611 (10%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
+VF+ +++++ K+ + +AR LFD P ++ V++ +M+ GY + E +A +LF M
Sbjct: 150 DVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQE-LADEAFELFKLM 208
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
+ ++ +EF TS L+ + V GRQ+H+ +K ++L+ MY KC
Sbjct: 209 RHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVANALVTMYVKC- 267
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
G +E ALKTF N +++W+ +++G+
Sbjct: 268 -------------------------------GSLEDALKTFELSGNKN-SITWSAMVTGF 295
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
Q GD+++ LKLF M ++G +E T ++AC + +++H + LK G
Sbjct: 296 AQFGDSDKALKLFYDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQL 355
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
+V S +VD+Y KC G++ +AR+ F+ + +
Sbjct: 356 YVLSALVDMYAKC-------------------------------GSIVDARKGFECIQQP 384
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
+VV+WT++ +GYV+ + E +L + + GV+ + L + +L AC+ AAL GK++
Sbjct: 385 DVVLWTSIITGYVQNGDYEGALNLYGK-MQLGGVIPNDLTMASVLKACSNLAALDQGKQM 443
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
HA I++ ++ + S L MY+KCG++ IF RD++ +N MI+ + +G
Sbjct: 444 HAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISWNAMISGLSQNGRG 503
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC 534
+ + LFE+M +G KPD VTFV +LSA H G V+ G YF M ++ I+P +HYAC
Sbjct: 504 NEGLELFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRGWVYFKMMFDEFNIAPTVEHYAC 563
Query: 535 MIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNN 594
M+D+ RA +L +A EF++S + + L + +R+ +L A EKL+ L
Sbjct: 564 MVDILSRAGKLHEAKEFIESATVDHGLCLWRILLAASKNHRDYDLGAYAGEKLMELGSLE 623
Query: 595 KARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKT 654
+ YV L+++Y A G W ++ R+R M+ + GCSW+ ++ H+F VGD HP+
Sbjct: 624 SSAYVLLSSIYTALGKWEDVERVRGMMKARGVTKEPGCSWIELKSLTHVFVVGDNMHPQI 683
Query: 655 NAIYSVLAIFT 665
+ I L + T
Sbjct: 684 DEIRLGLKLLT 694
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 98/207 (47%), Gaps = 14/207 (6%)
Query: 402 CALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLY 461
C L G+ +HA IL G ++ ++L+++Y+KC + + A ++F + +D+V +
Sbjct: 20 CTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKDVVSW 79
Query: 462 NVMIACYAH---HGHEEKAILLFEE--MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYF 516
N +I ++ H + LF + M K I P+A T + +A G +
Sbjct: 80 NCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQA- 138
Query: 517 NSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRN 576
+++ S + + ++++Y + + +A + +P E +AV S+ + +
Sbjct: 139 HALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMP-ERNAV---SWATMISGYAS 194
Query: 577 AELAGEAEE--KLLRLE--GNNKARYV 599
ELA EA E KL+R E G N+ +V
Sbjct: 195 QELADEAFELFKLMRHEEKGKNENEFV 221
>gi|356532255|ref|XP_003534689.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Glycine max]
Length = 948
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 208/750 (27%), Positives = 335/750 (44%), Gaps = 142/750 (18%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H Q I +GL + N L+H+YS ++ ++ +F E N+F+WNT++ A S +
Sbjct: 27 HAQLILSGLDASLFLLNNLLHMYSNCGMVDDAFCVFREANHANIFTWNTMLHAFFDSGRM 86
Query: 73 KQARSLFDSSPH--KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH--IRMDEFTV 128
++A +LFD PH +D V++ +M+ GY G A ++K F+ M H D F+
Sbjct: 87 REAENLFDEMPHIVRDSVSWTTMISGYCQ-NGLPAHSIKTFMSMLRDSNHDIQNCDPFSY 145
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE 188
T T+ C L + F QLHA ++K A +SL+DMY KC A VF E
Sbjct: 146 TCTMKACGCLASTRFALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETVFLN-IE 204
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
+L N+M+ + AL F R P+ +D VSWNTLIS + Q G L +V
Sbjct: 205 SPSLFCWNSMIYGYSQLYGPYEALHVFTRMPK-HDHVSWNTLISVFSQYGHGIRCLSTYV 263
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
M G + N T+ S LSAC + ++K +H+ +L+ + F+ SG++D+Y KC
Sbjct: 264 EMCNLGFKPNFMTYGSVLSACASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKC- 322
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
G + ARR F+SL E+N V WT L SG +
Sbjct: 323 ------------------------------GCLALARRVFNSLGEQNQVSWTCLISGVAQ 352
Query: 369 ---AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
+ ALF+ + + VV D LV +LG C+ Q G+ +H Y ++ G+
Sbjct: 353 FGLGDDALALFNQMRQ----ASVVLDEFTLVTILGVCSGQNYAATGELLHGYAIKNGMDS 408
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNF-------------------------------I 454
+ + ++ MY++CG+ A + F++
Sbjct: 409 SVPVGNAIITMYARCGDTEKASLAFRSMPLRDTISWTAMITAFSQNGDIDRARQCFDMTP 468
Query: 455 ERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFV----------------- 497
ER+++ +N M++ Y HG E+ + L+ M K +KPD VTF
Sbjct: 469 ERNVITWNSMLSTYIQHGFSEEGMKLYVLMRSKAVKPDWVTFATSIRACADLATIKLGTQ 528
Query: 498 ------------------AILSAFRHCGSVEMGEKYFNSMTADYKIS------------- 526
+I++ + CG ++ K F+S+ IS
Sbjct: 529 VVSHVTKFGLSSDVSVANSIVTMYSRCGQIKEARKVFDSIHVKNLISWNAMMAAFAQNGL 588
Query: 527 -----------------PETDHY-ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFL 568
P+ Y A + DL GRA L++A + +P + +A + G+ L
Sbjct: 589 GNKAIETYEDMLRTECKPDHISYVAVLSDLLGRAGLLDQAKNLIDGMPFKPNATVWGALL 648
Query: 569 NVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNR 628
CR++ ++ LA A +KL+ L + YV LAN+Y G + +RK M+ +
Sbjct: 649 GACRIHHDSILAKTAAKKLMELNVEDSGGYVLLANIYTESGELENVADMRKLMKVKGIRK 708
Query: 629 FAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
GCSW+ V++ +H+FTV + SHP+ N +Y
Sbjct: 709 SPGCSWIEVDNRLHVFTVDETSHPQINEVY 738
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 125/429 (29%), Positives = 199/429 (46%), Gaps = 24/429 (5%)
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
R+LHA ++ + DAS F +++L+ MYS C ++A VF N+ + N M+ A
Sbjct: 23 ARKLHAQLILSGLDASLFLLNNLLHMYSNCGMVDDAFCVFRE-ANHANIFTWNTMLHAFF 81
Query: 204 REGEMEMALKTFWRQPEL-NDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG----VRWN 258
G M A F P + D+VSW T+ISGY QNG +K F+ M + +
Sbjct: 82 DSGRMREAENLFDEMPHIVRDSVSWTTMISGYCQNGLPAHSIKTFMSMLRDSNHDIQNCD 141
Query: 259 EHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLL 318
++ + AC L + + A ++H+ V+K L + + + +VD+Y KC + AE++ L
Sbjct: 142 PFSYTCTMKACGCLASTRFALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETVFL 201
Query: 319 LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL---FSGYVKAQNCEAL 375
+ F +SMI GYS EA F + + + V W L FS Y C +
Sbjct: 202 NIESPSLFCWNSMIYGYSQLYGPYEALHVFTRMPKHDHVSWNTLISVFSQYGHGIRCLST 261
Query: 376 FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVD 435
+ + K +T + L ACA + L G +HA ILRM +D L S L+D
Sbjct: 262 YVEMCNLGFKPNFMTYGSV----LSACASISDLKWGAHLHARILRMEHSLDAFLGSGLID 317
Query: 436 MYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVT 495
MY+KCG + A +F + E++ V + +I+ A G + A+ LF +M + + D T
Sbjct: 318 MYAKCGCLALARRVFNSLGEQNQVSWTCLISGVAQFGLGDDALALFNQMRQASVVLDEFT 377
Query: 496 FVAILSA-----FRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
V IL + G + G N M + + +I +Y R EKA
Sbjct: 378 LVTILGVCSGQNYAATGELLHGYAIKNGMDSSVPVG------NAIITMYARCGDTEKASL 431
Query: 551 FMKSIPTEE 559
+S+P +
Sbjct: 432 AFRSMPLRD 440
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 114/205 (55%), Gaps = 4/205 (1%)
Query: 11 ICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSH 70
+ H AIK G+ + N +I +Y++ ++ F MP R+ SW +I+A ++
Sbjct: 396 LLHGYAIKNGMDSSVPVGNAIITMYARCGDTEKASLAFRSMPLRDTISWTAMITAFSQNG 455
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
D+ +AR FD +P ++++T+NSML YI G+ + +KL++ M+S + ++ D T +
Sbjct: 456 DIDRARQCFDMTPERNVITWNSMLSTYIQ-HGFSEEGMKLYVLMRS--KAVKPDWVTFAT 512
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
++ C L + G Q+ + + K + +S++ MYS+C +EA +VF+ +
Sbjct: 513 SIRACADLATIKLGTQVVSHVTKFGLSSDVSVANSIVTMYSRCGQIKEARKVFDSIHVK- 571
Query: 191 NLISKNAMVAACCREGEMEMALKTF 215
NLIS NAM+AA + G A++T+
Sbjct: 572 NLISWNAMMAAFAQNGLGNKAIETY 596
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 184/618 (29%), Positives = 297/618 (48%), Gaps = 74/618 (11%)
Query: 57 FSWNTIISACI-----KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLF 111
F W+ ++A + + + ARSLFD P +D+ ++N+M+ G I G A AL +
Sbjct: 203 FQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQ-NGNAAQALDVL 261
Query: 112 IEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYS 171
EM+ E I MD TV S L +C +L ++ +H +++K + F ++LI+MY+
Sbjct: 262 DEMRL--EGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYA 319
Query: 172 KCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLI 231
K +A +VF+ Q L D VSWN++I
Sbjct: 320 KFGNLGDAQKVFQ---------------------------------QMFLRDVVSWNSII 346
Query: 232 SGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG-L 290
+ Y QN D F +M NG+ + T S S R+ K ++ +H ++++ G L
Sbjct: 347 AAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWL 406
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
+ + + ++D+Y K G ++ A + F+
Sbjct: 407 MEAVVIGNAVMDMYAKL-------------------------------GVIDSAHKVFNL 435
Query: 351 LTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHP 410
+ K+VV W L SGY + ++ + + V +L A A AL
Sbjct: 436 IPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQ 495
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
G IH ++++ + +D + + L+D+Y KCG + A +F V +N +I+C+
Sbjct: 496 GMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGI 555
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD 530
HGH EKA+ LF EM ++G+KPD VTF+++LSA H G V+ G+ +F+ M +Y I P
Sbjct: 556 HGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQ-EYGIKPSLK 614
Query: 531 HYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRL 590
HY CM+DL GRA LE A +F+K +P DA I G+ L CR++ N EL A ++L +
Sbjct: 615 HYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEV 674
Query: 591 EGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVS 650
+ N YV L+N+YA G W + ++R R + G S + V + IF G+ S
Sbjct: 675 DSENVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSSIEVNRRVDIFYTGNQS 734
Query: 651 HPKTNAIYSVLAIFTGEL 668
HPK IY+ L I T ++
Sbjct: 735 HPKCKEIYAELRILTAKM 752
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 127/557 (22%), Positives = 223/557 (40%), Gaps = 138/557 (24%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
++ A + H+ IK GL +N LI++Y+K L +++K+F +M R+V SWN+II+
Sbjct: 288 DISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIA 347
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
A ++ D AR F + G E D L
Sbjct: 348 AYEQNDDPVTARGFFFK----------------MQLNGLEPDLL---------------- 375
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV-SSLIDMYSKCRCYEEACRVF 183
T+ S ++ + + R +H F+++ + ++++DMY+K + A +VF
Sbjct: 376 --TLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVF 433
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
NLI + D VSWNTLISGY QNG A E
Sbjct: 434 -------NLIP--------------------------VKDVVSWNTLISGYTQNGLASEA 460
Query: 244 LKLFVRMGE-NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
++++ M E ++ N+ T+ S L+A + ++ IH ++K L + FV + ++D
Sbjct: 461 IEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLID 520
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
+Y KC G + +A F + ++ V W A+
Sbjct: 521 LYGKC-------------------------------GRLVDAMCLFYQVPRESSVPWNAI 549
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
S + + E L E + EGV D + + LL AC+ + GK + G
Sbjct: 550 ISCHGIHGHGEKALKLFRE-MQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQEYG 608
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
++ K +VD+ + G + A +FI +D+ L+
Sbjct: 609 IKPSLKHYGCMVDLLGRAGFLEMA----YDFI-KDMPLH--------------------- 642
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRA 542
PDA + A+L A R G++E+G+ F S S +Y + ++Y
Sbjct: 643 --------PDASIWGALLGACRIHGNIELGK--FASDRLFEVDSENVGYYVLLSNIYANV 692
Query: 543 NQLEKAIEFMKSIPTEE 559
+ E ++ ++S+ E
Sbjct: 693 GKWE-GVDKVRSLARER 708
>gi|18398422|ref|NP_564401.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806407|sp|P0C7R0.1|PPR69_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g32415, mitochondrial; Flags: Precursor
gi|332193363|gb|AEE31484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 224/683 (32%), Positives = 339/683 (49%), Gaps = 64/683 (9%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLV 88
L+ Y+K L E+R LF+ MPERN+ + N +++ +K + +A +LF P K++V
Sbjct: 81 TSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVV 139
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVG-FGRQL 147
++ ML + +G DA++LF EM E V S L L+ G +
Sbjct: 140 SWTVMLTALCD-DGRSEDAVELFDEMP---------ERNVVSWNTLVTGLIRNGDMEKAK 189
Query: 148 HAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGE 207
F S D + +++I Y + EEA +F G E N+++ +MV CR G+
Sbjct: 190 QVFDAMPSRDVVSW--NAMIKGYIENDGMEEAKLLF-GDMSEKNVVTWTSMVYGYCRYGD 246
Query: 208 MEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE--NGVRWNEHTFASA 265
+ A + F PE N VSW +ISG+ N E L LF+ M + + V N T S
Sbjct: 247 VREAYRLFCEMPERN-IVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISL 305
Query: 266 LSACCGL--RNVKCAKEIHSWVLKNGL------------ISNPFVSSG------------ 299
AC GL + +++H+ V+ NG + + + SSG
Sbjct: 306 AYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNES 365
Query: 300 --------IVDVYCKCENMNYAESML-LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
I++ Y K ++ AE++ +K + + S +SMI GY G++ A F
Sbjct: 366 FDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQK 425
Query: 351 LTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHP 410
L +K+ V WT + SG V+ + LLS+ V + G+ +LL + + L
Sbjct: 426 LHDKDGVTWTVMISGLVQNELFAEAASLLSDMV-RCGLKPLNSTYSVLLSSAGATSNLDQ 484
Query: 411 GKEIHAYILRMGVQMDKKLI--STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACY 468
GK IH I + D LI ++LV MY+KCG + A IF +++D V +N MI
Sbjct: 485 GKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGL 544
Query: 469 AHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE 528
+HHG +KA+ LF+EML+ G KP++VTF+ +LSA H G + G + F +M Y I P
Sbjct: 545 SHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPG 604
Query: 529 TDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLN-RNAELAGEAEE-- 585
DHY MIDL GRA +L++A EF+ ++P D + G+ L +C LN R+ + G AE
Sbjct: 605 IDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAA 664
Query: 586 -KLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKG-NRFAGCSWVYVEHEIHI 643
+LL L+ N +V L NVYA G +RK+M G+KG + GCSWV V ++
Sbjct: 665 MRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEM-GIKGVKKTPGCSWVVVNGRANV 723
Query: 644 FTVGDVSHPKTNAIYSVLAIFTG 666
F GD S + A VL IF G
Sbjct: 724 FLSGDKS--ASEAAQMVLPIFCG 744
>gi|280967731|gb|ACZ98537.1| PPR motif protein [Malus x domestica]
Length = 751
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 192/626 (30%), Positives = 315/626 (50%), Gaps = 78/626 (12%)
Query: 83 PHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVG 142
P ++ V +NSM+ GY+ G +A+++F EM+ +E + + T++S L+ L +
Sbjct: 161 PQRNAVAWNSMIVGYVQ-NGLNEEAIEVFYEMR--EEGVEPTQVTLSSFLSASANLGALQ 217
Query: 143 FGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAAC 202
G+Q HA V + + SSLI+ YSK E+A VF E+
Sbjct: 218 DGKQGHAIAVICGIEMTTNLGSSLINFYSKVGLIEDAESVFSRMLEK------------- 264
Query: 203 CREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTF 262
D V+WN LISGYVQ G+ ++ L + M +R++ T
Sbjct: 265 --------------------DVVTWNLLISGYVQIGEVDKALNMCHLMRLENLRFDSVTL 304
Query: 263 ASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN----------- 311
A+ +SA +RN+K KE H + ++N L S+ V S IVD+Y KCE +
Sbjct: 305 ATLMSAFADMRNLKLGKEGHCYCIRNNLESDVVVVSSIVDMYAKCEKIGCARRVFNSSIT 364
Query: 312 ------------YAE------------SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRH 347
+AE M L N S +S+I+G+ G + EA+
Sbjct: 365 KDLILWNTMLAAFAELGHSGEALNLFYQMQLESVPPNVISWNSLILGFLNSGQVNEAKDM 424
Query: 348 FDSL----TEKNVVVWTALFSGYVKAQ-NCEALFDLLSEFVTKEGVVTDALILVILLGAC 402
F + + N+V WT L SG ++ EA+ + + + GV + + ++ +L AC
Sbjct: 425 FLQMQSLGVQPNLVTWTTLISGLARSGFGYEAILTF--QRMQEAGVKPNVVSIIGVLLAC 482
Query: 403 ALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYN 462
A+L G+ +H Y++R + + + ++LVDMY+KCG+ A+ +F +++L +YN
Sbjct: 483 INLASLQIGRALHGYLIRHSLYLSIPIATSLVDMYAKCGDRDQAKRVFDMIPDKELPIYN 542
Query: 463 VMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTAD 522
MI+ +A HG +A+ L+ + E+G+KPD +TF L A H V G + F M ++
Sbjct: 543 AMISGFALHGQAVEALALYRCLKEEGLKPDNITFTNALYACSHAMMVSEGLELFVDMVSN 602
Query: 523 YKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGE 582
+ I+P +HY CM+ L R L++A + ++P + D ILGS L CR + EL
Sbjct: 603 HNINPSIEHYGCMVSLLSRCGDLDEAFGLISAMPYKPDVQILGSLLAACREHNKIELEEY 662
Query: 583 AEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIH 642
+LL+L+ +N YV ++N YAA G W E+ ++R+ M+ + GCSW+ V E++
Sbjct: 663 LSNQLLKLQPDNSGNYVAMSNAYAAAGRWDEVKKVRQLMKERGLRKIPGCSWIQVGEELN 722
Query: 643 IFTVGDVSHPKTNAIYSVLAIFTGEL 668
+F GD SHP+T IY+ LA+ E+
Sbjct: 723 VFVAGDKSHPETEEIYTTLALLLMEI 748
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 132/584 (22%), Positives = 248/584 (42%), Gaps = 147/584 (25%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A+ G+ +TT + LI+ YSK L+ ++ +F M E++V +WN +IS ++ ++
Sbjct: 223 HAIAVICGIEMTTNLGSSLINFYSKVGLIEDAESVFSRMLEKDVVTWNLLISGYVQIGEV 282
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+A ++ ++L E++R D T+ + +
Sbjct: 283 DKALNM--------------------------CHLMRL--------ENLRFDSVTLATLM 308
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ + N+ G++ H + ++ + ++ VSS++DMY+KC A RVF + +L
Sbjct: 309 SAFADMRNLKLGKEGHCYCIRNNLESDVVVVSSIVDMYAKCEKIGCARRVFNSSITK-DL 367
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQP----------------------ELNDA------ 224
I N M+AA G AL F++ ++N+A
Sbjct: 368 ILWNTMLAAFAELGHSGEALNLFYQMQLESVPPNVISWNSLILGFLNSGQVNEAKDMFLQ 427
Query: 225 ----------VSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRN 274
V+W TLISG ++G E + F RM E GV+ N + L AC L +
Sbjct: 428 MQSLGVQPNLVTWTTLISGLARSGFGYEAILTFQRMQEAGVKPNVVSIIGVLLACINLAS 487
Query: 275 VKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVG 334
++ + +H +++++ L + +++ +VD+Y KC
Sbjct: 488 LQIGRALHGYLIRHSLYLSIPIATSLVDMYAKC--------------------------- 520
Query: 335 YSLQGNMEEARRHFDSLTEKNVVVWTALFSGY-VKAQNCEALFDLLSEFVTKEGVVTDAL 393
G+ ++A+R FD + +K + ++ A+ SG+ + Q EAL L + +EG+ D +
Sbjct: 521 ----GDRDQAKRVFDMIPDKELPIYNAMISGFALHGQAVEAL--ALYRCLKEEGLKPDNI 574
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF 453
L AC+ HA ++ G+++ VDM S +
Sbjct: 575 TFTNALYACS-----------HAMMVSEGLEL-------FVDMVS------------NHN 604
Query: 454 IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
I + Y M++ + G ++A L M KPD ++L+A R +E+ E
Sbjct: 605 INPSIEHYGCMVSLLSRCGDLDEAFGLISAM---PYKPDVQILGSLLAACREHNKIELEE 661
Query: 514 KYFNSMTADYKISPE-TDHYACMIDLY---GRANQLEKAIEFMK 553
N + K+ P+ + +Y M + Y GR ++++K + MK
Sbjct: 662 YLSNQLL---KLQPDNSGNYVAMSNAYAAAGRWDEVKKVRQLMK 702
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 166/396 (41%), Gaps = 77/396 (19%)
Query: 119 EHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEE 178
+++R+ L CV + GRQ+HA +VK + FA++ I+
Sbjct: 4 KNLRIGPEVYGELLQGCVYERALHTGRQIHAQIVK---KGAIFAMNEYIE---------- 50
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
+K + A C E A + +R+ L + SW +I + G
Sbjct: 51 ---------------TKLVIFYAKCDNPE---ASNSLFRRVRLKNVFSWAAVIGLNCRKG 92
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
+E L F M ENG+ + + L AC GL ++ K +H GL+S +V
Sbjct: 93 FYQEALLGFKEMQENGLLPDNFVLPNVLKACGGLEWIRIGKVVH------GLVSCGYV-- 144
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
K + + RN+ + +SMIVGY G EEA F + E
Sbjct: 145 ------WKMWGGGGCKKGVCGMPQRNAVAWNSMIVGYVQNGLNEEAIEVFYEMRE----- 193
Query: 359 WTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
EGV + L L A A AL GK+ HA
Sbjct: 194 ---------------------------EGVEPTQVTLSSFLSASANLGALQDGKQGHAIA 226
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
+ G++M L S+L++ YSK G + AE +F +E+D+V +N++I+ Y G +KA+
Sbjct: 227 VICGIEMTTNLGSSLINFYSKVGLIEDAESVFSRMLEKDVVTWNLLISGYVQIGEVDKAL 286
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
+ M + ++ D+VT ++SAF ++++G++
Sbjct: 287 NMCHLMRLENLRFDSVTLATLMSAFADMRNLKLGKE 322
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 140/308 (45%), Gaps = 77/308 (25%)
Query: 1 MRSLNL-KEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSW 59
MR+L L KE H I+ L + + ++ +Y+K + +R++F+ +++ W
Sbjct: 314 MRNLKLGKEG---HCYCIRNNLESDVVVVSSIVDMYAKCEKIGCARRVFNSSITKDLILW 370
Query: 60 NTIISACIKSHDLKQARSLF-----DSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
NT+++A + +A +LF +S P +++++NS++ G++N+ G +A +F++M
Sbjct: 371 NTMLAAFAELGHSGEALNLFYQMQLESVP-PNVISWNSLILGFLNS-GQVNEAKDMFLQM 428
Query: 115 QS---------------------------------ADEHIRMDEFTVTSTLNLCVKLLNV 141
QS + ++ + ++ L C+ L ++
Sbjct: 429 QSLGVQPNLVTWTTLISGLARSGFGYEAILTFQRMQEAGVKPNVVSIIGVLLACINLASL 488
Query: 142 GFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAA 201
GR LH ++++ S S +SL+DMY+KC ++A RVF+ ++
Sbjct: 489 QIGRALHGYLIRHSLYLSIPIATSLVDMYAKCGDRDQAKRVFDMIPDK------------ 536
Query: 202 CCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHT 261
E+ + +N +ISG+ +G A E L L+ + E G++ + T
Sbjct: 537 -------ELPI--------------YNAMISGFALHGQAVEALALYRCLKEEGLKPDNIT 575
Query: 262 FASALSAC 269
F +AL AC
Sbjct: 576 FTNALYAC 583
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 190/657 (28%), Positives = 319/657 (48%), Gaps = 72/657 (10%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFD----EMPERNVFSWN 60
L EA++ + ++ GL + +++ K L ++++ D E+N N
Sbjct: 8 TLSEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMN 67
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
++ I+ L++AR +FD+ K ++N+M+ GY+ + E DA++LF EM E
Sbjct: 68 NLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAE-DAMRLFREM--CHEG 124
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
++ + T L C L + +G+++HA + ++ ++L+ MY KC EA
Sbjct: 125 VQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEAR 184
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
R+F+ NL++ +D +SW +I Y Q+G+
Sbjct: 185 RIFD------NLMN---------------------------HDIISWTVMIGAYAQSGNG 211
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
+E +L ++M + G + N T+ S L+AC +K K +H L GL + V + +
Sbjct: 212 KEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTAL 271
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
V +Y K G++++AR FD + ++VV W
Sbjct: 272 VQMYAK-------------------------------SGSIDDARVVFDRMKVRDVVSWN 300
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
+ + + +DL + T EG DA++ + +L ACA AL K+IH + L
Sbjct: 301 VMIGAFAEHGRGHEAYDLFLQMQT-EGCKPDAIMFLSILNACASAGALEWVKKIHRHALD 359
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
G+++D ++ + LV MYSK G++ A ++F R++V +N MI+ A HG + A+ +
Sbjct: 360 SGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEV 419
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
F M G+KPD VTFVA+LSA H G V+ G + +MT Y I P+ H CM+DL G
Sbjct: 420 FRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLG 479
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQ 600
RA +L +A F+ ++ + D G+ L CR N EL ++ L+L+ N A YV
Sbjct: 480 RAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVL 539
Query: 601 LANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
L+N+YA G W + +R MR + G SW+ V+++IH F V D SHP+ I
Sbjct: 540 LSNIYAEAGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEI 596
>gi|326520249|dbj|BAK07383.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 178/551 (32%), Positives = 290/551 (52%), Gaps = 20/551 (3%)
Query: 128 VTSTLNLCVKLLNVG----FGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
V + L+L + +++G GR HA ++KT+ + + LI++Y+ + F
Sbjct: 31 VATVLHLIERAISLGDVRYLGRAAHALLLKTALNHHTLLSNRLIELYAMLNSPAASRTAF 90
Query: 184 EGCTEEVNLISKNAMVAACCR-EGEMEMALKTFWRQPELN-DAVSWNTLISGYVQNGDAE 241
E N S N ++AA R + AL P + + VS+NT+IS +NG
Sbjct: 91 EDLPYR-NAHSYNNLLAALSRGSATLPDALHLLDAMPASSRNVVSYNTIISALARNGRQG 149
Query: 242 EGLKLFVRMGENG-----VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFV 296
E L++F R+ + V + S SAC G+ ++ +E+H V+ +G+ +
Sbjct: 150 EALRVFARLARDRCLGPEVALDRFAVVSVASACAGMGALRPLREMHGAVVVSGVEVTVIM 209
Query: 297 SSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNV 356
++ +VD Y K M A ++ ++++ S +SMI GY ++EA R F + E++
Sbjct: 210 ANAMVDAYSKAGRMEDARTLFNQMSIQDTVSWTSMIAGYCRAKRLDEAIRVFHMMPEQDT 269
Query: 357 VVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHA 416
+ WTAL SG+ + +A DL + + EG+ LV LGACA + G+E+H
Sbjct: 270 IAWTALISGHEQNGEEDAALDLFQQMLV-EGMAPTPFALVSSLGACAKLGLVTRGREVHG 328
Query: 417 YILRMGVQMDKKLI---STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH 473
+ILR + +D I + L+DMYSKCG+M A ++F ERD + +N M+ ++H+G
Sbjct: 329 FILRRRIGLDPFNIFIHNALIDMYSKCGDMATAMLVFARMSERDFISWNSMVTGFSHNGQ 388
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA 533
++++ +F+ ML+ ++P VTF+A+L+A H G V G + SM + + P +HYA
Sbjct: 389 GKQSLAMFKRMLDAEVQPTYVTFLAVLTACSHAGLVTDGRRILESMQY-HGVEPRAEHYA 447
Query: 534 CMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSF---LNVCRLNRNAELAGEAEEKLLRL 590
ID GR +QLE+A EF+K + + GS+ L CR++ N E+A + E L +L
Sbjct: 448 SFIDALGRNHQLEEASEFIKGLSSRIGPGTTGSWGALLGACRVHGNTEIAEKVAESLFQL 507
Query: 591 EGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVS 650
E N RYV L+N+YAA G W + RIR M+ + CSW+ V H+F D S
Sbjct: 508 EPGNSGRYVMLSNIYAAAGQWDDARRIRAIMKEKGLRKDQACSWIEVRSAKHMFVADDTS 567
Query: 651 HPKTNAIYSVL 661
H + N IY +L
Sbjct: 568 HCEANEIYGML 578
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 188/366 (51%), Gaps = 16/366 (4%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIK-SHD 71
H +K L T+ +N+LI +Y+ N SR F+++P RN S+N +++A + S
Sbjct: 55 HALLLKTALNHHTLLSNRLIELYAMLNSPAASRTAFEDLPYRNAHSYNNLLAALSRGSAT 114
Query: 72 LKQARSLFDSSP--HKDLVTYNSMLCGYINAEGYEADALKLFIEM---QSADEHIRMDEF 126
L A L D+ P +++V+YN+++ + G + +AL++F + + + +D F
Sbjct: 115 LPDALHLLDAMPASSRNVVSYNTIISA-LARNGRQGEALRVFARLARDRCLGPEVALDRF 173
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
V S + C + + R++H +V + + + ++++D YSK E+A +F
Sbjct: 174 AVVSVASACAGMGALRPLREMHGAVVVSGVEVTVIMANAMVDAYSKAGRMEDARTLFNQM 233
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
+ + + +S +M+A CR ++ A++ F PE D ++W LISG+ QNG+ + L L
Sbjct: 234 SIQ-DTVSWTSMIAGYCRAKRLDEAIRVFHMMPE-QDTIAWTALISGHEQNGEEDAALDL 291
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP---FVSSGIVDV 303
F +M G+ S+L AC L V +E+H ++L+ + +P F+ + ++D+
Sbjct: 292 FQQMLVEGMAPTPFALVSSLGACAKLGLVTRGREVHGFILRRRIGLDPFNIFIHNALIDM 351
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEA----RRHFDSLTEKNVVVW 359
Y KC +M A + R+ S +SM+ G+S G +++ +R D+ + V +
Sbjct: 352 YSKCGDMATAMLVFARMSERDFISWNSMVTGFSHNGQGKQSLAMFKRMLDAEVQPTYVTF 411
Query: 360 TALFSG 365
A+ +
Sbjct: 412 LAVLTA 417
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 119/247 (48%), Gaps = 39/247 (15%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
I N ++ YSK + ++R LF++M ++ SW ++I+ ++ L +A +F P +
Sbjct: 208 IMANAMVDAYSKAGRMEDARTLFNQMSIQDTVSWTSMIAGYCRAKRLDEAIRVFHMMPEQ 267
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR 145
D + + +++ G+ G E AL LF +M E + F + S+L C KL V GR
Sbjct: 268 DTIAWTALISGH-EQNGEEDAALDLFQQMLV--EGMAPTPFALVSSLGACAKLGLVTRGR 324
Query: 146 QLHAFMVKTSNDASGFAV---SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAAC 202
++H F+++ F + ++LIDMYSKC
Sbjct: 325 EVHGFILRRRIGLDPFNIFIHNALIDMYSKC----------------------------- 355
Query: 203 CREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTF 262
G+M A+ F R E D +SWN++++G+ NG ++ L +F RM + V+ TF
Sbjct: 356 ---GDMATAMLVFARMSE-RDFISWNSMVTGFSHNGQGKQSLAMFKRMLDAEVQPTYVTF 411
Query: 263 ASALSAC 269
+ L+AC
Sbjct: 412 LAVLTAC 418
>gi|8920616|gb|AAF81338.1|AC007767_18 Contains similarity to a hypothetical protein F19I3.26 gi|7485810
from Arabidopsis thaliana BAC F19I3 gb|AC004238. It
contains a PPR repeat domain PF|01535. ESTs gb|AV539170,
gb|AV551571, gb|AA597781, gb|AV544524, gb|AV531577 and
gb|AV533492 come from this gene [Arabidopsis thaliana]
Length = 864
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 224/683 (32%), Positives = 339/683 (49%), Gaps = 64/683 (9%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLV 88
L+ Y+K L E+R LF+ MPERN+ + N +++ +K + +A +LF P K++V
Sbjct: 184 TSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVV 242
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVG-FGRQL 147
++ ML + +G DA++LF EM E V S L L+ G +
Sbjct: 243 SWTVMLTALCD-DGRSEDAVELFDEMP---------ERNVVSWNTLVTGLIRNGDMEKAK 292
Query: 148 HAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGE 207
F S D + +++I Y + EEA +F G E N+++ +MV CR G+
Sbjct: 293 QVFDAMPSRDVVSW--NAMIKGYIENDGMEEAKLLF-GDMSEKNVVTWTSMVYGYCRYGD 349
Query: 208 MEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE--NGVRWNEHTFASA 265
+ A + F PE N VSW +ISG+ N E L LF+ M + + V N T S
Sbjct: 350 VREAYRLFCEMPERN-IVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISL 408
Query: 266 LSACCGL--RNVKCAKEIHSWVLKNGL------------ISNPFVSSG------------ 299
AC GL + +++H+ V+ NG + + + SSG
Sbjct: 409 AYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNES 468
Query: 300 --------IVDVYCKCENMNYAESML-LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
I++ Y K ++ AE++ +K + + S +SMI GY G++ A F
Sbjct: 469 FDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQK 528
Query: 351 LTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHP 410
L +K+ V WT + SG V+ + LLS+ V + G+ +LL + + L
Sbjct: 529 LHDKDGVTWTVMISGLVQNELFAEAASLLSDMV-RCGLKPLNSTYSVLLSSAGATSNLDQ 587
Query: 411 GKEIHAYILRMGVQMDKKLI--STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACY 468
GK IH I + D LI ++LV MY+KCG + A IF +++D V +N MI
Sbjct: 588 GKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGL 647
Query: 469 AHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE 528
+HHG +KA+ LF+EML+ G KP++VTF+ +LSA H G + G + F +M Y I P
Sbjct: 648 SHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPG 707
Query: 529 TDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLN-RNAELAGEAEE-- 585
DHY MIDL GRA +L++A EF+ ++P D + G+ L +C LN R+ + G AE
Sbjct: 708 IDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAA 767
Query: 586 -KLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKG-NRFAGCSWVYVEHEIHI 643
+LL L+ N +V L NVYA G +RK+M G+KG + GCSWV V ++
Sbjct: 768 MRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEM-GIKGVKKTPGCSWVVVNGRANV 826
Query: 644 FTVGDVSHPKTNAIYSVLAIFTG 666
F GD S + A VL IF G
Sbjct: 827 FLSGDKS--ASEAAQMVLPIFCG 847
>gi|15226737|ref|NP_181604.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276036|sp|Q7XJN6.1|PP197_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g40720
gi|330254774|gb|AEC09868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 860
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 192/651 (29%), Positives = 307/651 (47%), Gaps = 101/651 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K GL L+ +YSK ++ E+ +F + ++ + WN +++A +
Sbjct: 295 HCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAE---- 350
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
N GY A L F+ +S + D FT+++ +
Sbjct: 351 --------------------------NDYGYSALDLFGFMRQKS----VLPDSFTLSNVI 380
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C L +G+ +HA + K ++ S+L+ +YSKC C +A VF+ E+
Sbjct: 381 SCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEK--- 437
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM-- 250
D V+W +LISG +NG +E LK+F M
Sbjct: 438 ------------------------------DMVAWGSLISGLCKNGKFKEALKVFGDMKD 467
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
++ ++ + S +AC GL ++ ++H ++K GL+ N FV S ++D+Y KC
Sbjct: 468 DDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKC--- 524
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
G E A + F S++ +N+V W ++ S Y +
Sbjct: 525 ----------------------------GLPEMALKVFTSMSTENMVAWNSMISCYSRNN 556
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
E DL + + +G+ D++ + +L A + A+L GK +H Y LR+G+ D L
Sbjct: 557 LPELSIDLFN-LMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLK 615
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+ L+DMY KCG YAE IF+ + L+ +N+MI Y HG A+ LF+EM + G
Sbjct: 616 NALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGES 675
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
PD VTF++++SA H G VE G+ F M DY I P +HYA M+DL GRA LE+A
Sbjct: 676 PDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYS 735
Query: 551 FMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGN 610
F+K++P E D+ I L+ R + N EL + EKLLR+E + YVQL N+Y G
Sbjct: 736 FIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGL 795
Query: 611 WAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
E ++ M+ ++ GCSW+ V ++F G S P I++VL
Sbjct: 796 KNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVL 846
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 118/454 (25%), Positives = 204/454 (44%), Gaps = 70/454 (15%)
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
FT S L C L N+ +G+ +H +V F +SL++MY KC + A +VF+G
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
++ + +S D WN++I GY + +EG+
Sbjct: 121 WSQSQSGVSAR--------------------------DVTVWNSMIDGYFKFRRFKEGVG 154
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKC--AKEIHSWVLKNGLISNPFVSSGIVDV 303
F RM GVR + + + +S C N + K+IH ++L+N L ++ F+ + ++D+
Sbjct: 155 CFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDM 214
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK-NVVVWTAL 362
Y K G S+ +A R F + +K NVV+W +
Sbjct: 215 YFK--------------------------FGLSI-----DAWRVFVEIEDKSNVVLWNVM 243
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
G+ + CE+ DL V + LGAC+ G++IH +++MG
Sbjct: 244 IVGFGGSGICESSLDLY-MLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMG 302
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
+ D + ++L+ MYSKCG + AE +F +++ L ++N M+A YA + + A+ LF
Sbjct: 303 LHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFG 362
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADY---KISPETDHYACMIDLY 539
M +K + PD+ T ++S C SV Y S+ A+ I + + ++ LY
Sbjct: 363 FMRQKSVLPDSFTLSNVIS----CCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLY 418
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLN-VCR 572
+ A KS+ E+D V GS ++ +C+
Sbjct: 419 SKCGCDPDAYLVFKSM-EEKDMVAWGSLISGLCK 451
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 123/563 (21%), Positives = 229/563 (40%), Gaps = 106/563 (18%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPE-------RNVF 57
NL H + G L+++Y K L + ++FD + R+V
Sbjct: 75 NLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVT 134
Query: 58 SWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSA 117
WN++I K K+ F ML + + + +L + + +
Sbjct: 135 VWNSMIDGYFKFRRFKEGVGCF-----------RRMLVFGVRPDAF---SLSIVVSVMCK 180
Query: 118 DEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYE 177
+ + R +E G+Q+H FM++ S D F ++LIDMY K
Sbjct: 181 EGNFRREE------------------GKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSI 222
Query: 178 EACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQN 237
+A RVF ++ N+ V WN +I G+ +
Sbjct: 223 DAWRVFVEIEDKSNV--------------------------------VLWNVMIVGFGGS 250
Query: 238 GDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVS 297
G E L L++ N V+ +F AL AC N ++IH V+K GL ++P+V
Sbjct: 251 GICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVC 310
Query: 298 SGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVV 357
+ ++ +Y KC G + EA F + +K +
Sbjct: 311 TSLLSMYSKC-------------------------------GMVGEAETVFSCVVDKRLE 339
Query: 358 VWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
+W A+ + Y + + DL F+ ++ V+ D+ L ++ C++ + GK +HA
Sbjct: 340 IWNAMVAAYAENDYGYSALDLFG-FMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAE 398
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
+ + +Q + S L+ +YSKCG A ++F++ E+D+V + +I+ +G ++A
Sbjct: 399 LFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEA 458
Query: 478 ILLFEEML--EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACM 535
+ +F +M + +KPD+ ++ +A ++ G + SM + + +
Sbjct: 459 LKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT-GLVLNVFVGSSL 517
Query: 536 IDLYGRANQLEKAIEFMKSIPTE 558
IDLY + E A++ S+ TE
Sbjct: 518 IDLYSKCGLPEMALKVFTSMSTE 540
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 130/302 (43%), Gaps = 40/302 (13%)
Query: 226 SWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNE-HTFASALSACCGLRNVKCAKEIHSW 284
S N+ I +Q G+ + L L+ + + W TF S L AC L N+ K IH
Sbjct: 26 SINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 285 VLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEA 344
V+ G +PF+++ +V++Y KC ++YA + + G S S
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYA--VQVFDGWSQSQS----------------- 126
Query: 345 RRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACAL 404
++ ++V VW ++ GY K + + + GV DA L I++
Sbjct: 127 -----GVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLV-FGVRPDAFSLSIVVSVMCK 180
Query: 405 QAALH--PGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER-DLVLY 461
+ GK+IH ++LR + D L + L+DMY K G A +F ++ ++VL+
Sbjct: 181 EGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLW 240
Query: 462 NVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR-----------HCGSVE 510
NVMI + G E ++ L+ +K + +F L A HC V+
Sbjct: 241 NVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVK 300
Query: 511 MG 512
MG
Sbjct: 301 MG 302
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 103/264 (39%), Gaps = 67/264 (25%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L+ L H IK GL L + LI +YSK L + K+F M N+ +WN++IS
Sbjct: 492 LRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMIS- 550
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
C ++L P + +N ML + I D
Sbjct: 551 CYSRNNL----------PELSIDLFNLML-----------------------SQGIFPDS 577
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
++TS L ++ G+ LH + ++ + ++LIDMY KC + A +F+
Sbjct: 578 VSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFK- 636
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
+M K+ ++WN +I GY +GD L
Sbjct: 637 -----------------------KMQHKSL---------ITWNLMIYGYGSHGDCITALS 664
Query: 246 LFVRMGENGVRWNEHTFASALSAC 269
LF M + G ++ TF S +SAC
Sbjct: 665 LFDEMKKAGESPDDVTFLSLISAC 688
>gi|297847764|ref|XP_002891763.1| hypothetical protein ARALYDRAFT_314676 [Arabidopsis lyrata subsp.
lyrata]
gi|297337605|gb|EFH68022.1| hypothetical protein ARALYDRAFT_314676 [Arabidopsis lyrata subsp.
lyrata]
Length = 828
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 201/701 (28%), Positives = 343/701 (48%), Gaps = 49/701 (6%)
Query: 14 VQAIKAGLTLTTITT-----NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIK 68
Q ++ L TT +T N I +++ L+E+ +F +M R++ SWN +ISA +
Sbjct: 34 TQKTRSFLETTTTSTAIFQCNSQISKLARNGNLQEAEAIFRQMSHRSIVSWNAMISAYAE 93
Query: 69 SHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
+ + +A +FD P + +YN+M+ I + A +LF ++ E
Sbjct: 94 NGKMSKAWQVFDEMPVRATTSYNAMITAMIKNKCDLGKAYELFCDIP---------EKNA 144
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSND-ASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
S + + G + +T A + L+ Y + + EA RVFEG
Sbjct: 145 VSYATMITGFVRAGRFDEAECLYAETPVKFRDPVASNVLLSGYLRVGKWNEAVRVFEGMA 204
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
+ ++S ++MV C+ G + A F R PE N ++W +I GY + G E+G LF
Sbjct: 205 VK-EVVSYSSMVDGYCKMGRILDARSLFDRMPERN-VITWTAMIDGYFKAGFFEDGFGLF 262
Query: 248 VRMGENG-VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
+RM + G VR N +T A AC + +IH + + L + F+ + ++ +Y K
Sbjct: 263 LRMRQEGDVRVNSNTLAVMFRACRDFFRYREGSQIHGLLSRMPLEFDLFLGNSLISMYSK 322
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL---F 363
M A+++ + ++S S +S+I G + + EA F+ + K++V WT + F
Sbjct: 323 LGYMGEAKAVFGVMKYKDSVSWNSLITGLVQREQISEAYELFEKMPGKDMVSWTDMIKGF 382
Query: 364 SGYVKAQNCEALFDLLSE------------FVT---------------KEGVVTDALILV 396
SG + C LF ++ E FV+ ++ V ++
Sbjct: 383 SGKGEISKCVELFGMMPEKDDITWTAMISAFVSNGYYEEALCWFHKMLRKQVCPNSYTFS 442
Query: 397 ILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER 456
+L A A A L G +IH +++M + D + ++LV MY KCGN A IF E
Sbjct: 443 SVLSATASLADLIEGLQIHGRVVKMNMANDLSVQNSLVSMYCKCGNTNDAYKIFSCISEP 502
Query: 457 DLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYF 516
++V YN MI+ ++++G ++A+ LF + G +P+ VTF+A+LSA H G V++G KYF
Sbjct: 503 NIVSYNTMISGFSYNGFGKEAVKLFSMLESTGKEPNGVTFLALLSACVHVGYVDLGWKYF 562
Query: 517 NSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRN 576
SM Y I P DHYACM+DL+GR+ L++A + ++P E + + GS L+ + +
Sbjct: 563 KSMKFSYGIEPGPDHYACMVDLFGRSGLLDEAYNLISTMPCEPHSGVWGSLLSASKTHLR 622
Query: 577 AELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVY 636
+LA A +KL+ LE ++ YV L+ +Y+ G ++ RI + + + G SW+
Sbjct: 623 VDLAELAAKKLIELEPDSATPYVVLSQLYSMVGKNSDCDRIMNIKKSKRIKKDPGSSWII 682
Query: 637 VEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIA-GAFY 676
++ ++H F GD SH I L + E+ I G F+
Sbjct: 683 LKGQVHNFLAGDESHLNLEEIAFTLDMIGNEMELITFGGFF 723
>gi|147790104|emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
Length = 825
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 182/590 (30%), Positives = 295/590 (50%), Gaps = 69/590 (11%)
Query: 75 ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNL 134
AR +FD ++ +N+M+ GY+ +A+ LF+++ + E +D+ T S L
Sbjct: 274 AREIFDCCLERNTEVWNTMIGGYVQ-NNCPIEAIDLFVQVMES-EQFXLDDVTFLSALTA 331
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
+L + GRQLHA+++K+S ++++I MYS+C + +VF E
Sbjct: 332 ISQLQWLDLGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLER----- 386
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
D V+WNT++S +VQNG +EGL L M + G
Sbjct: 387 ----------------------------DVVTWNTMVSAFVQNGLDDEGLMLVFEMQKQG 418
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
+ T + LS LR+ + K+ H++++++G I + ++D+Y K + A+
Sbjct: 419 FMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHG-IQFEGMDGYLIDMYAKSGLITTAQ 477
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEA 374
+ +S +++ W A+ +GY + E
Sbjct: 478 QLF-----------------------------EKNSXYDRDEATWNAMIAGYTQNGLSEE 508
Query: 375 LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLV 434
F + + + ++ V +A+ L +L AC + GK+IH + +R + + + + L+
Sbjct: 509 GFAVFRKMI-EQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNQNVFVGTALL 567
Query: 435 DMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAV 494
DMYSK G +TYAE +F +E++ V Y MI Y HG E+A+ LF ML GIKPD+V
Sbjct: 568 DMYSKSGAITYAENVFAETLEKNSVTYTTMILSYGQHGMGERALSLFHAMLGSGIKPDSV 627
Query: 495 TFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKS 554
TFVAILSA + G V+ G + F SM +YKI P ++HY C+ D+ GR ++ +A EF+K
Sbjct: 628 TFVAILSACSYAGLVDEGLRIFQSMEREYKIQPSSEHYCCVADMLGRVGRVXEAYEFVKG 687
Query: 555 IPTEEDAV-ILGSFLNVCRLNRNAELAGEAEEKLLRLEGNN--KARYVQLANVYAAEGNW 611
+ E + I GS L CR++ EL KLL +E + +V L+N+YAAEGNW
Sbjct: 688 LGEEGNTFRIWGSLLGACRIHGEFELGKVVANKLLEMEKGSXLTGYHVLLSNIYAAEGNW 747
Query: 612 AEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+ R+RK+MR + AGCSWV V ++ F D HP+ IY +L
Sbjct: 748 DNVDRVRKEMRQKGLMKEAGCSWVEVAGHVNCFMSRDHKHPQCAEIYQML 797
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 145/561 (25%), Positives = 254/561 (45%), Gaps = 62/561 (11%)
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
C + H QA LFDS P V +N+++ G+I DAL + M+ A + D
Sbjct: 48 CRQGHP-HQALHLFDSIPRPTTVLWNTIIIGFI-CNNMPIDALLFYARMR-ASPSPKFDS 104
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
+T +STL C + ++ G+ LH ++++ +S +SL++MYS C
Sbjct: 105 YTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTC------------ 152
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
EV + C ++ + F + N V+WNT+IS YV+ E K
Sbjct: 153 -LTEVPYLGTAYDFNNC------DLVRRVFDTMRKRN-VVAWNTMISWYVKTERLIEAFK 204
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
+F M G+R +F + A + + A ++ V+K G S VD +
Sbjct: 205 MFRTMMRMGIRPTPVSFVNVFPAVWRMNDYDNANVLYGLVVKLG--------SDYVDDF- 255
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
F +SS I Y+ G ++ AR FD E+N VW + G
Sbjct: 256 --------------------FVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGG 295
Query: 366 YVKAQNC--EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
YV+ NC EA+ DL + + E D + + L A + L G+++HAYIL+
Sbjct: 296 YVQ-NNCPIEAI-DLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAYILKSST 353
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
+ +++ ++ MYS+CG++ + +F N +ERD+V +N M++ + +G +++ ++L E
Sbjct: 354 ILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFE 413
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRAN 543
M ++G D+VT A+LS + S E+G++ + D Y +ID+Y ++
Sbjct: 414 MQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMDGY--LIDMYAKSG 471
Query: 544 QLEKAIE-FMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLA 602
+ A + F K+ + D + + N +E K+ +E N + V LA
Sbjct: 472 LITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKM--IEQNVRPNAVTLA 529
Query: 603 NVYAAEGNWAEMGRIRKQMRG 623
++ A +G + KQ+ G
Sbjct: 530 SILPACNPMGTIG-LGKQIHG 549
>gi|147856499|emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
Length = 954
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 188/652 (28%), Positives = 332/652 (50%), Gaps = 28/652 (4%)
Query: 29 NQLIHIYSKHNLLRE-SRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP---H 84
N L+ SK +L ++ ++ R+ F ++S + A+ +F+ SP
Sbjct: 38 NDLLQQCSKSHLSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECF 97
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
+L+ +NS+L + A GY +AL+++ M+ + D FT + C + +
Sbjct: 98 SNLLLWNSILRANV-AHGYCEEALEIYCRMRKLG--VSADGFTFPLVIRACALMGSRKLC 154
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE-----GCTEEVNLISKNAMV 199
R +H +V+ + + L+ MY K ++A +VFE C ++S A+
Sbjct: 155 RSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALN 214
Query: 200 AACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNE 259
C EM + + +P L V+W +L+S + + G E ++LF RM G+
Sbjct: 215 YDCHGASEMFRMMGSAGLEPNL---VTWTSLLSSHARCGQHVETMELFGRMRMRGIGATA 271
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLL 319
A LS L K IH +V+K G + FV + ++ +Y K N+N A + L
Sbjct: 272 EALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLE 331
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSL--------TEKNVVVWTALFSGYVKAQN 371
+N S +++I Y+ G +EA F L NVV W+A+ G+
Sbjct: 332 IKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQ 391
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
E +L + V +++ + +L CA AALH G+EIH +++R + + + +
Sbjct: 392 GEEALELFRRMQLAK-VKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGN 450
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
L++MY+K G+ ++F+ +DL+ +N M+A Y HG E AI F++M++ G +P
Sbjct: 451 GLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEP 510
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
D VTFVA+LSA H G V G + F+ M ++++ P+ +HYACM+DL GRA L++A +
Sbjct: 511 DGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKV 570
Query: 552 MKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNW 611
+KS+P E +A + G+ LN CR+++N E+A E ++ L Y+ L+N+YAA G W
Sbjct: 571 VKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRW 630
Query: 612 AEMGRIR--KQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+ ++R + +G+K + G SW+ V+ ++++F+ G+ H + +Y +L
Sbjct: 631 EDSAKVRISAKTKGLK--KTPGQSWIQVKKKVYMFSAGNTQHAELEEVYRIL 680
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 114/478 (23%), Positives = 215/478 (44%), Gaps = 54/478 (11%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H ++ G N+L+ +Y K + ++RK+F+ M R+ SWNT++S ++D
Sbjct: 158 HGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDC 217
Query: 73 KQARSLF----DSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
A +F + +LVT+ S+L + G + ++LF M+ + V
Sbjct: 218 HGASEMFRMMGSAGLEPNLVTWTSLLSSHARC-GQHVETMELFGRMRMRGIGATAEALAV 276
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE 188
L++ V L G+ +H ++VK + F +SLI +Y K A R+ +
Sbjct: 277 --VLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGK-HGNVNAARILFLEIK 333
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELND-------AVSWNTLISGYVQNGDAE 241
N++S NA++++ G + A F + + ++ VSW+ +I G+ G E
Sbjct: 334 TKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGE 393
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E L+LF RM V+ N T AS LS C L + +EIH V+++ + N V +G++
Sbjct: 394 EALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLI 453
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSIS--SMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
++Y K + ++ E L+ + + N IS +M+ GY + G E A R FD +
Sbjct: 454 NMYTK--SGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQM-------- 503
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
K+G D + V +L AC+ + G+E+ ++
Sbjct: 504 ------------------------IKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMI 539
Query: 420 R-MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMI-ACYAHHGHE 474
+ V+ + + +VD+ + G + A + ++ +E + ++ ++ +C H E
Sbjct: 540 KEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTE 597
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 132/257 (51%), Gaps = 21/257 (8%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACI 67
E + H +K G N LI +Y KH + +R LF E+ +N+ SWN +IS+
Sbjct: 289 EGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYA 348
Query: 68 KSHDLKQARSLF------DSSP--HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
+A ++F D P ++V++++++ G+ ++G +AL+LF MQ A
Sbjct: 349 DLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFA-SKGQGEEALELFRRMQLAK- 406
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
++ + T+ S L++C +L + GR++H +V++ D + + LI+MY+K ++E
Sbjct: 407 -VKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEG 465
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWR------QPELNDAVSWNTLISG 233
VFE E +LIS N MVA G E A++TF + +P D V++ ++S
Sbjct: 466 NLVFEK-IENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEP---DGVTFVAVLSA 521
Query: 234 YVQNGDAEEGLKLFVRM 250
G EG +LF +M
Sbjct: 522 CSHAGLVAEGRELFDKM 538
>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor
gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 165/483 (34%), Positives = 258/483 (53%), Gaps = 45/483 (9%)
Query: 178 EACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQN 237
EA ++F+ E + S N M++ R E A F R P DA SWNT+I+GY +
Sbjct: 111 EAHQLFDEIPEP-DTFSYNIMLSCYVRNVNFEKAQSFFDRMP-FKDAASWNTMITGYARR 168
Query: 238 GDAEEGLKLFVRMGE-NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFV 296
G+ E+ +LF M E N V WN
Sbjct: 169 GEMEKARELFYSMMEKNEVSWN-------------------------------------- 190
Query: 297 SSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT-EKN 355
++ Y +C ++ A + VR + ++MI GY +E A F +T KN
Sbjct: 191 --AMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKN 248
Query: 356 VVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIH 415
+V W A+ SGYV+ E L + +EG+ ++ L L C+ +AL G++IH
Sbjct: 249 LVTWNAMISGYVENSRPEDGLKLFRAML-EEGIRPNSSGLSSALLGCSELSALQLGRQIH 307
Query: 416 AYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEE 475
+ + + D +++L+ MY KCG + A +F+ ++D+V +N MI+ YA HG+ +
Sbjct: 308 QIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNAD 367
Query: 476 KAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACM 535
KA+ LF EM++ I+PD +TFVA+L A H G V +G YF SM DYK+ P+ DHY CM
Sbjct: 368 KALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCM 427
Query: 536 IDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNK 595
+DL GRA +LE+A++ ++S+P A + G+ L CR+++N ELA A EKLL+L N
Sbjct: 428 VDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNA 487
Query: 596 ARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTN 655
A YVQLAN+YA++ W ++ R+RK+M+ + G SW+ + +++H F D HP+ +
Sbjct: 488 AGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELD 547
Query: 656 AIY 658
+I+
Sbjct: 548 SIH 550
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 154/321 (47%), Gaps = 44/321 (13%)
Query: 25 TITTNQL-IHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP 83
TIT N L I I + + E+ +LFDE+PE + FS+N ++S +++ + ++A+S FD P
Sbjct: 92 TITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMP 151
Query: 84 HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGF 143
KD ++N+M+ GY G A +LF M +E
Sbjct: 152 FKDAASWNTMITGYAR-RGEMEKARELFYSMMEKNE------------------------ 186
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
+ +++I Y +C E+A F+ +++ AM+
Sbjct: 187 -----------------VSWNAMISGYIECGDLEKASHFFK-VAPVRGVVAWTAMITGYM 228
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
+ ++E+A F + V+WN +ISGYV+N E+GLKLF M E G+R N +
Sbjct: 229 KAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLS 288
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
SAL C L ++ ++IH V K+ L ++ + ++ +YCKC + A + + +
Sbjct: 289 SALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKK 348
Query: 324 NSFSISSMIVGYSLQGNMEEA 344
+ + ++MI GY+ GN ++A
Sbjct: 349 DVVAWNAMISGYAQHGNADKA 369
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 135/286 (47%), Gaps = 74/286 (25%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP----- 83
N +I Y++ + ++R+LF M E+N SWN +IS I+ DL++A F +P
Sbjct: 159 NTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVV 218
Query: 84 ---------------------------HKDLVTYNSMLCGYINAEGYEADALKLFIEMQS 116
+K+LVT+N+M+ GY+ E D LKLF M
Sbjct: 219 AWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPE-DGLKLFRAM-- 275
Query: 117 ADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTS--NDASGFAVSSLIDMYSKCR 174
+E IR + ++S L C +L + GRQ+H + K++ ND + A++SLI MY KC
Sbjct: 276 LEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVT--ALTSLISMYCKCG 333
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
+A ++FE ++ K +VA WN +ISGY
Sbjct: 334 ELGDAWKLFE-------VMKKKDVVA--------------------------WNAMISGY 360
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC--CGLRNVKCA 278
Q+G+A++ L LF M +N +R + TF + L AC GL N+ A
Sbjct: 361 AQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMA 406
>gi|357516905|ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522763|gb|AET03217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 186/613 (30%), Positives = 287/613 (46%), Gaps = 75/613 (12%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
E N F I+ C + + AR LFD P + T+N+M GY+ G+ D + LF
Sbjct: 41 EHNDFVAPNFITTCSRFKRIHHARKLFDKIPQPNTATWNAMFRGYLQ-NGHHRDTVVLFG 99
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
E+ FT + C KL V G ++H K ++ F +SLIDMYSK
Sbjct: 100 ELNRIAGMPNC--FTFPMIIKSCGKLEGVREGEEVHCCATKHGFKSNSFVATSLIDMYSK 157
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C E+A +VF GEM + V W +I+
Sbjct: 158 KGCVEDAYKVF----------------------GEMHE-----------RNVVVWTAIIN 184
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
GY+ GD G +LF ++ +++ W
Sbjct: 185 GYILCGDVVSGRRLF--------------------------DLAPERDVVMW-------- 210
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
S ++ Y + +NM A + R++ S ++M+ GY++ G +E + FD +
Sbjct: 211 -----SVLISGYIESKNMAAARELFDKMPNRDTMSWNAMLNGYAVNGEVEMFEKVFDEMP 265
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
E+NV W L GYVK + + + V+ + LV +L AC+ AL GK
Sbjct: 266 ERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFTLVAVLSACSRLGALDMGK 325
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
+H Y +G + + + + L+DMY+KCG + A ++F +D++ +N +I A HG
Sbjct: 326 WVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLDRKDIISWNTIINGLAIHG 385
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
H A+ +F+ M +G +PD VTFV ILSA H G V+ G YF SM Y I P+ +HY
Sbjct: 386 HAPDALGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGFLYFKSMVDHYSIVPQIEHY 445
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
CM+DL GRA L++A+ F++ +P E DAVI + L CRL +N E+A A ++L+ LE
Sbjct: 446 GCMVDLLGRAGLLDQALNFIRKMPIEPDAVIWAALLGACRLYKNVEIAELALQRLIELEP 505
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
NN A +V ++N+Y G ++ R++ MR + GCS + + F D H
Sbjct: 506 NNPANFVMVSNIYKDLGRSEDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHS 565
Query: 653 KTNAIYSVLAIFT 665
+T +IY VL T
Sbjct: 566 ETESIYRVLKGLT 578
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 134/313 (42%), Gaps = 57/313 (18%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
++E H A K G + LI +YSK + ++ K+F EM ERNV W II+
Sbjct: 126 VREGEEVHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIING 185
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE---HIR 122
I D+ R LFD +P +D+V ++ ++ GYI ++ A A +LF +M + D +
Sbjct: 186 YILCGDVVSGRRLFDLAPERDVVMWSVLISGYIESKNMAA-ARELFDKMPNRDTMSWNAM 244
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
++ + V + + K+ + R + F+ + LI Y K + E
Sbjct: 245 LNGYAVNGEVEMFEKVFDEMPERNV-------------FSWNGLIGGYVKNGLFSETLES 291
Query: 183 FEGCTEEVNLISKN----AMVAACCREGEMEM---------------------------- 210
F+ E ++I + A+++AC R G ++M
Sbjct: 292 FKRMLVEGHVIPNDFTLVAVLSACSRLGALDMGKWVHVYAESIGYKGNLFVGNVLIDMYA 351
Query: 211 -------ALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
A+ F + D +SWNT+I+G +G A + L +F RM G + TF
Sbjct: 352 KCGVIENAVVVF-NCLDRKDIISWNTIINGLAIHGHAPDALGMFDRMKSEGEEPDGVTFV 410
Query: 264 SALSACCGLRNVK 276
LSAC + VK
Sbjct: 411 GILSACTHMGLVK 423
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 197/663 (29%), Positives = 311/663 (46%), Gaps = 111/663 (16%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFD--EMPERNVFSWNTI 62
+LK A H Q + + N L+ +Y+K + + LF+ P NV +W T+
Sbjct: 112 SLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTL 171
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
I+ +S+ QA + F+ M++ I
Sbjct: 172 INQLSRSNKPFQALTFFN--------------------------------RMRTTG--IY 197
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
+ FT ++ L C + G+Q+HA + K F ++L+DMY+KC
Sbjct: 198 PNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKC--------- 248
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQN---GD 239
G M +A F P N VSWN++I G+V+N G
Sbjct: 249 -----------------------GSMLLAENVFDEMPHRN-LVSWNSMIVGFVKNKLYGR 284
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
A + + +G + V + +S LSAC GL + K++H ++K GL+ +V +
Sbjct: 285 AIGVFREVLSLGPDQV-----SISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNS 339
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
+VD+YCKC G E+A + F +++VV W
Sbjct: 340 LVDMYCKC-------------------------------GLFEDATKLFCGGGDRDVVTW 368
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
+ G + +N E + +EGV D L A A AAL G IH+++L
Sbjct: 369 NVMIMGCFRCRNFEQACTYFQAMI-REGVEPDEASYSSLFHASASIAALTQGTMIHSHVL 427
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
+ G + ++ S+LV MY KCG+M A +F+ E ++V + MI + HG +AI
Sbjct: 428 KTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIK 487
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
LFEEML +G+ P+ +TFV++LSA H G ++ G KYFNSM + I P +HYACM+DL
Sbjct: 488 LFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHYACMVDLL 547
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYV 599
GR +LE+A F++S+P E D+++ G+ L C + N E+ E E+L +LE +N Y+
Sbjct: 548 GRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEMGREVAERLFKLEPDNPGNYM 607
Query: 600 QLANVYAAEGNWAEMGRIRKQMRGMKGNRF-AGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
L+N+Y G E +R+ M G+ G R +GCSW+ V++ +F D SH +T IY
Sbjct: 608 LLSNIYIRHGMLEEADEVRRLM-GINGVRKESGCSWIDVKNRTFVFNANDRSHSRTQEIY 666
Query: 659 SVL 661
+L
Sbjct: 667 GML 669
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 24/213 (11%)
Query: 313 AESMLLLKGVRNS---FSISSMIVGYSLQGNMEEARRHFDSLTE------KNVVVWTALF 363
AE ++ + +R S FS+S + + LQ E AR +S E + V W LF
Sbjct: 22 AEILVTVLTIRKSIFGFSLSLLGLEEKLQVQKENARSKPNSNFEGLGPMSREVAFWLQLF 81
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
+ Y Q+ F S V D L LL A +L +IH+ ++
Sbjct: 82 TSY---QSGVPKFHQFSS-------VPD---LKHLLNNAAKLKSLKHATQIHSQLVTTNN 128
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIE--RDLVLYNVMIACYAHHGHEEKAILLF 481
I+TL+ +Y+KCG++ + ++F + ++V + +I + +A+ F
Sbjct: 129 HASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFF 188
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
M GI P+ TF AIL A H + G++
Sbjct: 189 NRMRTTGIYPNHFTFSAILPACAHAALLSEGQQ 221
>gi|242049708|ref|XP_002462598.1| hypothetical protein SORBIDRAFT_02g028755 [Sorghum bicolor]
gi|241925975|gb|EER99119.1| hypothetical protein SORBIDRAFT_02g028755 [Sorghum bicolor]
Length = 655
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 193/646 (29%), Positives = 326/646 (50%), Gaps = 21/646 (3%)
Query: 2 RSLNLKEALICHVQAIKAGL-TLTTITTNQLIHIYSK-HNLLRESRKLFDEMPE--RNVF 57
R+ L+ H A K+GL N ++ YS+ + L + +LFDE P R+
Sbjct: 18 RAARLRCGEQLHALAAKSGLLACNAFVRNSVLSFYSRLPSSLASALQLFDETPAPLRDTA 77
Query: 58 SWNTIISACIKSHDLKQARSLFDSSP--HKDLVTYNSMLCGYINAEGYEADALKLFIEMQ 115
+ N++++A ++ L +A+ L D P H+D V+Y +++ A G+ A+ +F M
Sbjct: 78 ARNSVLAALTRAGHLDRAQRLLDEMPRVHRDAVSYTTLVTALARA-GHAGRAVAVFRGML 136
Query: 116 SADEHIRMDEFTVTSTL---NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
S E++ +E T+ + C VG +H F +K + D ++L+ Y+
Sbjct: 137 S--ENVVPNEVTLAGAIMAFARCGAPATVGM---IHGFALKRALDGFVIVATNLVHAYAG 191
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
A +F+G T N ++ NAM+ + ++MA + FWR PE D VSW TLI
Sbjct: 192 VLELYSARAMFDGMTHR-NAVTWNAMLNGYVKAEMIDMAAEVFWRIPE-RDEVSWLTLID 249
Query: 233 GYVQNGDAEEGLKLFVRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI 291
GY+ + +K +V+M GE G +E + AC + +++H+ +LKNG
Sbjct: 250 GYICADLISDAMKAYVQMVGEVGANDHEVLLVDLMKACARYSAITEGQQLHTVILKNGFD 309
Query: 292 SNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL 351
++ FV + +V Y C + A+ L ++ S ++++ +G + EAR FD +
Sbjct: 310 AHAFVQATLVHFYGCCGLIGLAQMAFKLSDKSHTASWNALLAALLRKGLIHEARELFDDM 369
Query: 352 TEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG 411
E++ V W+ + SGYV+ + +L + V + + L L A A L G
Sbjct: 370 PERDTVSWSTMISGYVQTGRSDMALELFYSMLNTS-VEPNEVTLASALSAIADSGTLDQG 428
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER--DLVLYNVMIACYA 469
K IH +I+ +Q+ L + L+DMY+K G++ A F ++ + +N MI A
Sbjct: 429 KWIHDHIMNRPIQLTDNLSAGLIDMYAKRGSVADAVQFFNCASDKFSSVSPWNAMICSLA 488
Query: 470 HHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPET 529
HG+ ++ LF ++ IKP+++TF+ +LSA H G V G+ YF +MT +Y I P
Sbjct: 489 IHGYAHMSLDLFSQLQRTSIKPNSITFIGVLSACCHTGMVAKGKYYFEAMTREYGIQPTI 548
Query: 530 DHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLR 589
HY CM+DL GRA LE+A + + +P + D VI GS L+ R N L +A E+L +
Sbjct: 549 KHYGCMVDLLGRAGYLEEAEQLVSMMPMKADVVIWGSILSAARAQGNIALGEKAAEELAK 608
Query: 590 LEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWV 635
L+ + A V L+N+YA G+W + +RK+++ R G S +
Sbjct: 609 LDQTHGASKVALSNIYADAGHWTNVSVVRKELQDENFERLVGRSGI 654
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 190/672 (28%), Positives = 328/672 (48%), Gaps = 78/672 (11%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEM----PERNVFSWNTII 63
EAL AG + + T+ ++ + ++ LL R+L + E N+ N ++
Sbjct: 250 EALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNI-QCNALL 308
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
K + A +F KD +++NSML Y+ Y A+A+ F EM +
Sbjct: 309 VMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFY-AEAIDFFGEM--LQHGFQP 365
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
D V S + L + GR+ HA+ +K ++L+DMY KC E + +VF
Sbjct: 366 DHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVF 425
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
E M ++ D +SW T+++ + Q+ E
Sbjct: 426 E------------------------SMGIR---------DHISWTTILACFAQSSRHSEA 452
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
L++ + + + G+ + S L CCGL+++ K++H + ++NGL+ + + + ++D+
Sbjct: 453 LEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNGLL-DLILENRLIDI 511
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y +C G + + F + +K++V WT++
Sbjct: 512 YGEC-------------------------------GEFDHSLNLFQRVEKKDIVSWTSMI 540
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
+ L +E + K + D++ LV +L A A ++L GK++H +++R
Sbjct: 541 NCCTNNGRLNGAVFLFTE-MQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNF 599
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
++ ++S+LVDMYS CG+M YA +F+ +D+VL+ MI HGH ++AI LF+
Sbjct: 600 PIEGPVVSSLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKR 659
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRAN 543
ML+ G+ PD V+F+A+L A H VE G+ Y + M + Y++ P +HYAC++D+ GR+
Sbjct: 660 MLQTGLTPDHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSG 719
Query: 544 QLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLAN 603
Q E+A EF+K++P + + + + L CR++RN LA A KLL LE +N Y+ ++N
Sbjct: 720 QTEEAYEFIKTMPMDPKSAVWCALLGACRVHRNYGLAVVAANKLLELEPDNPGNYILVSN 779
Query: 604 VYAAEGNW--AEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
V+A G W A+ R R RG++ N CSW+ + + IH FT GD H + AI+ L
Sbjct: 780 VFAEMGKWNNAKETRTRMAERGLRKN--PACSWIEIGNNIHTFTSGDYCHRDSEAIHLKL 837
Query: 662 AIFTGELYEIAG 673
+ T L G
Sbjct: 838 SEITEMLRREGG 849
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 137/579 (23%), Positives = 264/579 (45%), Gaps = 105/579 (18%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPE--RNVFSWNTIISACIKSH 70
H A+K GL +T+ N LI +Y+K LL + ++F+ + + R+V SWN+++S C+++
Sbjct: 187 HGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQN- 245
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
G +AL LF MQSA M+ +T +
Sbjct: 246 -------------------------------GRTLEALALFRGMQSAG--FPMNSYTSVA 272
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L +C +L + GR+LHA ++K C E+
Sbjct: 273 VLQVCAELGLLSLGRELHAALLK--------------------------------CGSEL 300
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
N I NA++ + G ++ AL+ F + E D +SWN+++S YVQN E + F M
Sbjct: 301 N-IQCNALLVMYAKYGRVDSALRVFGQIAE-KDYISWNSMLSCYVQNSFYAEAIDFFGEM 358
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
++G + + S SA L + +E H++ +K L ++ V + ++D+Y KC
Sbjct: 359 LQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKC--- 415
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
G++E + + F+S+ ++ + WT + + + ++
Sbjct: 416 ----------------------------GSIECSAKVFESMGIRDHISWTTILACFAQSS 447
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
+++ E + KEG++ D++++ +L C ++ K++H Y +R G+ +D L
Sbjct: 448 RHSEALEMILE-LQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNGL-LDLILE 505
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+ L+D+Y +CG ++ +FQ ++D+V + MI C ++G A+ LF EM + I+
Sbjct: 506 NRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQ 565
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
PD+V V+IL A S+ G K + E + ++D+Y + AI
Sbjct: 566 PDSVALVSILVAIAGLSSLTKG-KQVHGFLIRRNFPIEGPVVSSLVDMYSGCGSMNYAIR 624
Query: 551 FMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLR 589
+ +D V+ + +N ++ + + A + +++L+
Sbjct: 625 VFERAKC-KDVVLWTAMINATGMHGHGKQAIDLFKRMLQ 662
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 123/508 (24%), Positives = 228/508 (44%), Gaps = 73/508 (14%)
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQ-SADEHIRMDEFTVTS 130
+ AR LF+ P + + ++N+++ Y+++ G +A++++ M+ SA D T+ S
Sbjct: 111 VDDARRLFNGMPARTVFSWNALVGAYLSS-GSAGEAMRVYGAMRASAAPGSAPDGCTLAS 169
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L C + G ++H VK D S ++LI MY+KC + A RVFE
Sbjct: 170 VLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFE------ 223
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
W Q + D SWN+++SG VQNG E L LF M
Sbjct: 224 -------------------------WLQQDARDVASWNSVVSGCVQNGRTLEALALFRGM 258
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
G N +T + L C L + +E+H+ +LK G +++ C
Sbjct: 259 QSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCG---------SELNIQC----- 304
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
++++V Y+ G ++ A R F + EK+ + W ++ S YV+
Sbjct: 305 ------------------NALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNS 346
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
D E + + G D +V L A + L+ G+E HAY ++ + D ++
Sbjct: 347 FYAEAIDFFGEML-QHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVG 405
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+TL+DMY KCG++ + +F++ RD + + ++AC+A +A+ + E+ ++GI
Sbjct: 406 NTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIM 465
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
D++ +IL S+ + ++ + + ++ +ID+YG + + ++
Sbjct: 466 VDSMMIGSILETCCGLKSISLLKQVHCYAIRNGLLDLILENR--LIDIYGECGEFDHSLN 523
Query: 551 FMKSIPTEEDAVILGSFLNVC----RLN 574
+ + ++D V S +N C RLN
Sbjct: 524 LFQRV-EKKDIVSWTSMINCCTNNGRLN 550
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 117/475 (24%), Positives = 199/475 (41%), Gaps = 119/475 (25%)
Query: 144 GRQLHAFMVKTSN---DASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVA 200
GRQ+HA V T + D GF + L+ MY +C ++A R+F G
Sbjct: 76 GRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNG--------------- 120
Query: 201 ACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM---GENGVRW 257
M +T + SWN L+ Y+ +G A E ++++ M G
Sbjct: 121 ---------MPARTVF---------SWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAP 162
Query: 258 NEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESML 317
+ T AS L AC + +C E+H +K GL + V++ ++ +Y KC
Sbjct: 163 DGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKC---------- 212
Query: 318 LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE--KNVVVWTALFSGYVK-AQNCEA 374
G ++ A R F+ L + ++V W ++ SG V+ + EA
Sbjct: 213 ---------------------GLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEA 251
Query: 375 LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLV 434
L L + G ++ V +L CA L G+E+HA +L+ G +++ + + LV
Sbjct: 252 L--ALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNIQCNALLV 309
Query: 435 DMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAV 494
MY+K G + A +F E+D + +N M++CY + +AI F EML+ G +PD
Sbjct: 310 -MYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHA 368
Query: 495 TFVAILSAFRH-----------------------------------CGSVEMGEKYFNSM 519
V++ SA H CGS+E K F SM
Sbjct: 369 CVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESM 428
Query: 520 TADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE---DAVILGSFLNVC 571
IS + ++ + ++++ +A+E + + E D++++GS L C
Sbjct: 429 GIRDHIS-----WTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETC 478
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 114/269 (42%), Gaps = 70/269 (26%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
++S++L + + C+ AI+ GL L I N+LI IY + S LF + ++++ SW
Sbjct: 481 LKSISLLKQVHCY--AIRNGL-LDLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWT 537
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
++I+ C T N L G A+ LF EMQ A+
Sbjct: 538 SMINCC----------------------TNNGRLNG----------AVFLFTEMQKAN-- 563
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
I+ D + S L L ++ G+Q+H F+++ + G VSSL+DMYS C A
Sbjct: 564 IQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVSSLVDMYSGCGSMNYAI 623
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
RVFE + + D V W +I+ +G
Sbjct: 624 RVFE---------------------------------RAKCKDVVLWTAMINATGMHGHG 650
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSAC 269
++ + LF RM + G+ + +F + L AC
Sbjct: 651 KQAIDLFKRMLQTGLTPDHVSFLALLYAC 679
>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 624
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 194/650 (29%), Positives = 308/650 (47%), Gaps = 100/650 (15%)
Query: 15 QAIKAGLTLTTITTNQLIHIYSKHNL-LRESRKLFDEMPERNVFSWNTIISACIKSHDLK 73
AI +G+ + +++L++ H+ SR LF ++ + NVFSWN + A +S
Sbjct: 50 HAIASGVFRDPVVSSKLLYYSLSHDHDFAFSRTLFFQIHKPNVFSWNFMFRAYSRS---- 105
Query: 74 QARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLN 133
S P + + YN ML D ++ L
Sbjct: 106 -------SFPAETIALYNLML-----------------------RNGTLPDNYSFPFVLK 135
Query: 134 LCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLI 193
C +L + GR++H+ +K F ++LI +S C E A VF+
Sbjct: 136 ACARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAVFD--------- 186
Query: 194 SKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM-GE 252
M+ A R D VSWN++ISGY+Q+ E LK+F + G+
Sbjct: 187 ----MLPALVR------------------DVVSWNSMISGYLQSHRYELALKVFWELLGD 224
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+ +E T SALS C L + K+IH +G + + FV S ++D+Y KC
Sbjct: 225 GSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTGSGFVLDVFVGSSLIDMYSKC----- 279
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G +E+AR+ FD + +N V WT++ +GY ++
Sbjct: 280 --------------------------GQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLF 313
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
+ +L E + G DA + +L AC AL G+ IH Y R ++MD +
Sbjct: 314 KEAIELFRE-MQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNA 372
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM-LEKGIKP 491
L+ MYSKCG++ A IF + D+ ++ +I+ A +G +KA+ LF +M + I+P
Sbjct: 373 LIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRP 432
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
+ +TF+ +L A H G V+ G YFN+MT Y ++P +HY CM+DL GRAN L +A +F
Sbjct: 433 NEITFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVEAEKF 492
Query: 552 MKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNW 611
++++P + D VI S L CR + N ELA A +++ LE V L+NVYA+ W
Sbjct: 493 IRTLPIQPDVVIWRSLLFACRNHGNIELAEFAAKQIEELEPRRCGARVLLSNVYASASRW 552
Query: 612 AEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
++ R+RK M + + GCS+V ++ +H V D SHP+ AIY +
Sbjct: 553 GDVKRVRKDMATQRIKKQPGCSFVEIDGLVHELFVADRSHPEMGAIYETM 602
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 109/473 (23%), Positives = 185/473 (39%), Gaps = 109/473 (23%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPE--RNVFSWNTIISACIKSH 70
H +K G+ L N LI +S + +R +FD +P R+V SWN++IS
Sbjct: 150 HSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAVFDMLPALVRDVVSWNSMIS------ 203
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
GY+ + YE ALK+F E+ D + DE T+ S
Sbjct: 204 -------------------------GYLQSHRYEL-ALKVFWELL-GDGSLSPDEVTLVS 236
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L++C +L + G+++H + F SSLIDMYSKC
Sbjct: 237 ALSVCGRLGLLDLGKKIHGLFTGSGFVLDVFVGSSLIDMYSKC----------------- 279
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
G++E A K F R P N V W ++I+GY Q+ +E ++LF M
Sbjct: 280 ---------------GQIEDARKVFDRIPHRN-TVCWTSMIAGYAQSDLFKEAIELFREM 323
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
G + T A LSAC + + IH + +N + + + ++ +Y KC
Sbjct: 324 QIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALIGMYSKC--- 380
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
G++++A F LT+ ++ W+A+ SG
Sbjct: 381 ----------------------------GDIQKALEIFHGLTQPDIFSWSAVISGLAMNG 412
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG-----KEIHAYILRMGVQM 425
+ L S+ + + + + +L AC + G Y L G++
Sbjct: 413 ESDKALHLFSQMEMISDIRPNEITFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEH 472
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKA 477
+VD+ + + AE + I+ D+V++ ++ +HG+ E A
Sbjct: 473 ----YGCMVDLLGRANLLVEAEKFIRTLPIQPDVVIWRSLLFACRNHGNIELA 521
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 150/322 (46%), Gaps = 22/322 (6%)
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEA--RRHFDSLTEKNVVVWTALFSG 365
+ N S + GV +SS ++ YSL + + A R F + + NV W +F
Sbjct: 42 RSFNQILSHAIASGVFRDPVVSSKLLYYSLSHDHDFAFSRTLFFQIHKPNVFSWNFMFRA 101
Query: 366 YVKAQ---NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
Y ++ AL++L+ + G + D +L ACA + LH G+EIH+ L++G
Sbjct: 102 YSRSSFPAETIALYNLM----LRNGTLPDNYSFPFVLKACARLSLLHKGREIHSSTLKLG 157
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNF--IERDLVLYNVMIACYAHHGHEEKAILL 480
V +D + + L+ +S CG + A +F + RD+V +N MI+ Y E A+ +
Sbjct: 158 VHLDVFVQNALISAFSSCGAVEAARAVFDMLPALVRDVVSWNSMISGYLQSHRYELALKV 217
Query: 481 FEEMLEKG-IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY--ACMID 537
F E+L G + PD VT V+ LS G +++G+K T + D + + +ID
Sbjct: 218 FWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTGSGFV---LDVFVGSSLID 274
Query: 538 LYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLE-GNNKA 596
+Y + Q+E A + IP + ++ ++L EA E ++ G A
Sbjct: 275 MYSKCGQIEDARKVFDRIPHRNTVC----WTSMIAGYAQSDLFKEAIELFREMQIGGFAA 330
Query: 597 RYVQLANVYAAEGNWAEMGRIR 618
+A V +A G+W + + R
Sbjct: 331 DAATIACVLSACGHWGALAQGR 352
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 194/653 (29%), Positives = 315/653 (48%), Gaps = 72/653 (11%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H Q I+ +L+ + + +I IY+ LL E+ LF + V +W ++I C
Sbjct: 28 HAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIR-CFTD--- 82
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+SLF + AL F+EM+++ D S L
Sbjct: 83 ---QSLF-------------------------SKALASFVEMRASGRC--PDHNVFPSVL 112
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC---RVFEGCTEE 189
C ++++ FG +H F+V+ D + ++L++MY+K VF+ +
Sbjct: 113 KSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQR 172
Query: 190 V-NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
N ++ C ++ + F P D VS+NT+I+GY Q+G E+ L++
Sbjct: 173 TSNSGDEDVKAETCIMPFGIDSVRRVFEVMPR-KDVVSYNTIIAGYAQSGMYEDALRMVR 231
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
MG ++ + T +S L +V KEIH +V++ G+ S+ ++ S +VD+Y K
Sbjct: 232 EMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAK-- 289
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
+E++ R F L ++ + W +L +GYV+
Sbjct: 290 -----------------------------SARIEDSERVFSRLYCRDGISWNSLVAGYVQ 320
Query: 369 AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK 428
L + VT + V A+ ++ ACA A LH GK++H Y+LR G +
Sbjct: 321 NGRYNEALRLFRQMVTAK-VKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIF 379
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
+ S LVDMYSKCGN+ A IF D V + +I +A HGH +A+ LFEEM +G
Sbjct: 380 IASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQG 439
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
+KP+ V FVA+L+A H G V+ YFNSMT Y ++ E +HYA + DL GRA +LE+A
Sbjct: 440 VKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEA 499
Query: 549 IEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAE 608
F+ + E + + L+ C +++N ELA + EK+ ++ N YV + N+YA+
Sbjct: 500 YNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASN 559
Query: 609 GNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
G W EM ++R +MR + CSW+ ++++ H F GD SHP + I L
Sbjct: 560 GRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFL 612
>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 939
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 170/607 (28%), Positives = 307/607 (50%), Gaps = 70/607 (11%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
+V N ++S K L++AR +F KD VT+N+M+CGY +EA ++KLF++M
Sbjct: 256 DVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEA-SVKLFMDM 314
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
+ D ++TST+ C + ++ G+ +H +++ + + A + LIDMY+KC
Sbjct: 315 I---DGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCG 371
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
A VF+ C+ D+V+WN+LI+GY
Sbjct: 372 DLLAAQEVFD---------------TTKCK------------------DSVTWNSLINGY 398
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
Q+G +EGL+ F +M + + + TF LS L ++ + IH V+K G +
Sbjct: 399 TQSGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAEL 457
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
+ + ++DVY KC G M++ + F ++
Sbjct: 458 IIGNSLLDVYAKC-------------------------------GEMDDLLKVFSYMSAH 486
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
+++ W + + V +C F +++E T EG++ D ++ +L C+L A GKEI
Sbjct: 487 DIISWNTVIASSVHFDDCTVGFQMINEMRT-EGLMPDEATVLGILPMCSLLAVRRQGKEI 545
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
H YI + G + + + + L++MYSKCG++ +F+ E+D+V + +I+ + +G
Sbjct: 546 HGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEG 605
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC 534
+KA+ F++M G+ PD+V F+A + A H G V+ G ++F+ M DY + P +HYAC
Sbjct: 606 KKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYAC 665
Query: 535 MIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNN 594
++DL R+ L +A EF+ S+P + DA + G+ L+ CR N +A +K+L L ++
Sbjct: 666 VVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDD 725
Query: 595 KARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKT 654
YV ++N+YA G W ++ +R M+ + G SW+ ++ +++F GD S +
Sbjct: 726 TGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQY 785
Query: 655 NAIYSVL 661
+ + +L
Sbjct: 786 DKVKDLL 792
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 130/510 (25%), Positives = 226/510 (44%), Gaps = 102/510 (20%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEM-PERNVFSWNTII 63
N + H I +GL+L+ I + +LI Y++ S +F + P NV+ WN+II
Sbjct: 34 NTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSII 93
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
A +T+N + + A GY + EM+ ++ ++
Sbjct: 94 RA----------------------LTHNGL---FTQALGY-------YTEMR--EKKLQP 119
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
D FT S +N C ++L++ G +H ++ ++ + ++LIDMYS+ + A VF
Sbjct: 120 DAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVF 179
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
E EM+ + D+VSWN+LISGY NG E+
Sbjct: 180 E------------------------EMSNR---------DSVSWNSLISGYCSNGFWEDA 206
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
L ++ + G+ + T +S L AC L VK +H + K G+ + + +G++ +
Sbjct: 207 LDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSM 266
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y K E + A + V++S + ++MI GY+ G E + + F
Sbjct: 267 YFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLF--------------- 311
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
D++ +G V D L + + AC L GK +H Y++ G
Sbjct: 312 ------------MDMI------DGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGF 353
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
+ D + L+DMY+KCG++ A+ +F +D V +N +I Y G+ ++ + F +
Sbjct: 354 ECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESF-K 412
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
M++ KPD+VTFV +LS F + G
Sbjct: 413 MMKMERKPDSVTFVLLLSIFSQLADINQGR 442
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 153/352 (43%), Gaps = 43/352 (12%)
Query: 222 NDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEI 281
N+ WN++I NG + L + M E ++ + TF S +++C + +++ +
Sbjct: 84 NNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIV 143
Query: 282 HSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNM 341
H ++ G S+ ++ + ++D+Y + +++ A + R+S S +S+I GY G
Sbjct: 144 HEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFW 203
Query: 342 EEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGA 401
E+A D+ +F G+V D + +L A
Sbjct: 204 EDA-------------------------------LDMYHKF-RMTGMVPDCFTMSSVLLA 231
Query: 402 CALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLY 461
C A+ G +H I ++G+ D + + L+ MY K + A +F +D V +
Sbjct: 232 CGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTW 291
Query: 462 NVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTA 521
N MI YA G E ++ LF +M++ G PD ++I S R CG + G+
Sbjct: 292 NTMICGYAQLGRHEASVKLFMDMID-GFVPD---MLSITSTIRACG--QSGDLQVGKFVH 345
Query: 522 DYKISP--ETDHYAC--MIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLN 569
Y I E D AC +ID+Y + L A E + +D+V S +N
Sbjct: 346 KYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKC-KDSVTWNSLIN 396
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 107/241 (44%), Gaps = 38/241 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H IK G I N L+ +Y+K + + K+F M ++ SWNT+I+
Sbjct: 445 HCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIA-------- 496
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
SS H D T + + EG + DE TV L
Sbjct: 497 --------SSVHFDDCTVGFQMINEMRTEG------------------LMPDEATVLGIL 530
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+C L G+++H ++ K+ +++ ++LI+MYSKC E +VF+ E+ ++
Sbjct: 531 PMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEK-DV 589
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQP---ELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
++ A+++A GE + ALK F L D+V++ I +G +EGL+ F R
Sbjct: 590 VTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDR 649
Query: 250 M 250
M
Sbjct: 650 M 650
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 107/250 (42%), Gaps = 40/250 (16%)
Query: 263 ASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGV 322
+S L +N + +HS ++ +GL + S ++ Y + ++
Sbjct: 23 SSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKD------------- 69
Query: 323 RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF 382
ISS+ V S+ NV +W ++ ++A LF +
Sbjct: 70 ----PISSVSVFRSIS-------------PTNNVYLWNSI----IRALTHNGLFTQALGY 108
Query: 383 VTK---EGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
T+ + + DA ++ +CA L G +H + + MG + D + + L+DMYS+
Sbjct: 109 YTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSR 168
Query: 440 CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
++ A +F+ RD V +N +I+ Y +G E A+ ++ + G+ PD T ++
Sbjct: 169 FVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSV 228
Query: 500 LSAFRHCGSV 509
L A CGS+
Sbjct: 229 LLA---CGSL 235
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 178/609 (29%), Positives = 302/609 (49%), Gaps = 72/609 (11%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
++F+ + + K + +AR +FD P +DLV++N+++ GY + G AL++ M
Sbjct: 169 DLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGY-SQNGMARMALEMVKSM 227
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
+E+++ T+ S L L + G+++H + +++ D+ ++L+DMY+KC
Sbjct: 228 --CEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCG 285
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
E A ++F+G E + VSWN++I Y
Sbjct: 286 SLETARQLFDGMLER---------------------------------NVVSWNSMIDAY 312
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
VQN + +E + +F +M + GV+ + + AL AC L +++ + IH ++ GL N
Sbjct: 313 VQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNV 372
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
V + ++ +YCKC+ ++ A SM F L +
Sbjct: 373 SVVNSLISMYCKCKEVDTAASM-------------------------------FGKLQSR 401
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEF--VTKEGVVTDALILVILLGACALQAALHPGK 412
+V W A+ G+ AQN + D L+ F + V D V ++ A A + H K
Sbjct: 402 TLVSWNAMILGF--AQNGRPI-DALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAK 458
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
IH ++R + + + + LVDMY+KCG + A +IF ER + +N MI Y HG
Sbjct: 459 WIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHG 518
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
+ A+ LFEEM + IKP+ VTF++++SA H G VE G K F M +Y I DHY
Sbjct: 519 FGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHY 578
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
M+DL GRA +L +A +F+ +P + + G+ L C++++N A +A E+L L
Sbjct: 579 GAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNP 638
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
++ +V LAN+Y A W ++G++R M + GCS V +++E+H F G +HP
Sbjct: 639 DDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHP 698
Query: 653 KTNAIYSVL 661
+ IY+ L
Sbjct: 699 DSKKIYAFL 707
>gi|449482566|ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Cucumis sativus]
Length = 908
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 186/676 (27%), Positives = 328/676 (48%), Gaps = 70/676 (10%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
+R+++ + H +K GL N L+ +Y K L +LF+EMPER++ SWN
Sbjct: 207 IRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLFEEMPERDITSWN 266
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
T+IS+ +K +A F LC +
Sbjct: 267 TVISSLVKEFKYDEAFDYFR----------GMQLC-----------------------KG 293
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
+++D F++++ L C + G+QLHA +K ++ SSLI Y+KC +
Sbjct: 294 LKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVT 353
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+FE ++I+ M+ + G ++ A++ F + P+ N +S+N +++G +N D
Sbjct: 354 DLFETMPIR-DVITWTGMITSYMEFGMLDSAVEVFNKMPKRN-CISYNAVLAGLSRNDDG 411
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
L+LF+ M E GV ++ T S ++AC L++ K +++I +V+K G++SN + + +
Sbjct: 412 SRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETAL 471
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFS--ISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
VD+Y +C M AE + + + N ++ ++SMI GY+ G + EA F S +
Sbjct: 472 VDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEG--- 528
Query: 359 WTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
+V D ++ +L C G ++H +
Sbjct: 529 ----------------------------AIVMDEVMSTSILSLCGSIGFHEMGMQMHCHA 560
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
L+ G+ + + + V MYSKC NM A +F +D+V +N ++A + H +KA+
Sbjct: 561 LKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQGDKAL 620
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHC--GSVEMGEKYFNSMTADYKISPETDHYACMI 536
++++M + GIKPD++TF I+SA++H V+ F SM ++ I P +HYA I
Sbjct: 621 GIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSMETEHNIKPTLEHYASFI 680
Query: 537 DLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKA 596
+ GR LE+A + ++++P E D + + LN CR+N+N L A +L +E +
Sbjct: 681 SVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNSCRINKNERLEKLAARNILAVEPKDPL 740
Query: 597 RYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNA 656
Y+ +N+Y+A G W ++R+ MR + SW+ E++IH F D SHP+
Sbjct: 741 SYILKSNLYSASGRWYYSEKVREDMREKGFRKHPSQSWIIHENKIHSFYARDRSHPQGKD 800
Query: 657 IYSVLAIFTGELYEIA 672
IYS L I E ++
Sbjct: 801 IYSGLEILILECLKVG 816
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 129/485 (26%), Positives = 230/485 (47%), Gaps = 48/485 (9%)
Query: 35 YSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSML 94
Y +L R F ++ E ++F N +ISA +K ++ A +F ++V+Y +++
Sbjct: 110 YGDPDLARAVHAQFLKL-EEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALI 168
Query: 95 CGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKT 154
G+ ++ +E +A++LF M D I +E+T + L C++ ++ G Q+H +VK
Sbjct: 169 SGFSKSD-WEDEAVELFFAM--LDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKL 225
Query: 155 SNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKT 214
+ F ++L+ +Y KC G +++ L+
Sbjct: 226 GLLSCVFICNALMGLYCKC--------------------------------GFLDLVLRL 253
Query: 215 FWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE-NGVRWNEHTFASALSACCGLR 273
F PE D SWNT+IS V+ +E F M G++ + + ++ L+AC G
Sbjct: 254 FEEMPE-RDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSV 312
Query: 274 NVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIV 333
+++H+ LK GL S+ VSS ++ Y KC + N + +R+ + + MI
Sbjct: 313 KPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTGMIT 372
Query: 334 GYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDAL 393
Y G ++ A F+ + ++N + + A+ +G + + +L E + +EGV
Sbjct: 373 SYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEML-EEGVEISDC 431
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIF-QN 452
L ++ AC L + ++I ++++ G+ + + + LVDMY++CG M AE IF Q
Sbjct: 432 TLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQR 491
Query: 453 FIERDLV-LYNVMIACYAHHGHEEKAILLFEEMLEKG-IKPDAVTFVAILSAFRHCGSV- 509
+E D + MI YA +G +AI LF +G I D V +ILS CGS+
Sbjct: 492 SLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSL---CGSIG 548
Query: 510 --EMG 512
EMG
Sbjct: 549 FHEMG 553
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 111/248 (44%), Gaps = 13/248 (5%)
Query: 318 LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA----QNCE 373
LK + F +++I Y G + +A + F L+ NVV +TAL SG+ K+ + E
Sbjct: 123 FLKLEEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVE 182
Query: 374 ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL 433
F +L G+ + V +L AC G ++H ++++G+ + + L
Sbjct: 183 LFFAMLDS-----GIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNAL 237
Query: 434 VDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM-LEKGIKPD 492
+ +Y KCG + +F+ ERD+ +N +I+ ++A F M L KG+K D
Sbjct: 238 MGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVD 297
Query: 493 AVTFVAILSAFRHCGSVE-MGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
+ +L+A GSV+ M + +++ + + +I Y + +
Sbjct: 298 HFSLSTLLTAC--AGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDL 355
Query: 552 MKSIPTEE 559
+++P +
Sbjct: 356 FETMPIRD 363
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 179/635 (28%), Positives = 313/635 (49%), Gaps = 74/635 (11%)
Query: 38 HNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGY 97
H+ L ++ FD + E +++ +K D++ A +F+ ++V +N ML Y
Sbjct: 268 HSYLLKAGMSFDYITE------GSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAY 321
Query: 98 INAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSND 157
A + ++F +MQ+ H ++FT L C + G Q+H+ +K +
Sbjct: 322 GQISDL-AKSFEIFGQMQATGIH--PNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFE 378
Query: 158 ASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWR 217
+ + LIDMYSK RC ++A ++ E
Sbjct: 379 SDMYVSGVLIDMYSKYRCLDKARKILE--------------------------------- 405
Query: 218 QPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKC 277
E D VSW ++I+GYVQ+ EE L F M + GV + ASA SAC G++ ++
Sbjct: 406 MLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQ 465
Query: 278 AKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSL 337
+IH+ V +G ++ + + +V++Y +C
Sbjct: 466 GLQIHARVYVSGYAADISIWNTLVNLYARC------------------------------ 495
Query: 338 QGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVI 397
G EEA F + K+ + W L SG+ +++ E + + +++ G + +
Sbjct: 496 -GRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMK-MSQAGAKYNVFTFIS 553
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD 457
+ A A A + GK++H ++ G + ++ + L+ +Y KCG++ A++IF R+
Sbjct: 554 AISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRN 613
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFN 517
V +N +I + HG +A+ LF++M ++G+KP+ VTF+ +L+A H G VE G YF
Sbjct: 614 EVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFK 673
Query: 518 SMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNA 577
SM+ Y ++P DHYAC++D+ GRA QL++A F+ +P +A+I + L+ C++++N
Sbjct: 674 SMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNI 733
Query: 578 ELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYV 637
E+ A + LL LE ++ A YV L+N YA G WA ++RK M+ + G SW+ V
Sbjct: 734 EIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEV 793
Query: 638 EHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
++ +H F VGD HP ++ IY L+ L +I
Sbjct: 794 KNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIG 828
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 131/546 (23%), Positives = 240/546 (43%), Gaps = 73/546 (13%)
Query: 7 KEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPER----NVFSWNTI 62
KEA + Q + T + ++ +K L + R + ++ ++ F N +
Sbjct: 126 KEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNAL 185
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
I+ + K A +F D VT+N+++ G+ G+ AL++F EMQ + +R
Sbjct: 186 IALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQC-GHGECALQIFDEMQLSG--LR 242
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
D TV S L C + ++ G+QLH++++K SL+D+Y KC
Sbjct: 243 PDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKC--------- 293
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
G++E A F + + V WN ++ Y Q D +
Sbjct: 294 -----------------------GDIETAHDIF-NLGDRTNVVLWNLMLVAYGQISDLAK 329
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
++F +M G+ N+ T+ L C ++ ++IHS +KNG S+ +VS ++D
Sbjct: 330 SFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLID 389
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
+Y K + ++AR+ + L +++VV WT++
Sbjct: 390 MYSKYRCL-------------------------------DKARKILEMLEKRDVVSWTSM 418
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
+GYV+ CE E + GV D + L ACA A+ G +IHA + G
Sbjct: 419 IAGYVQHDFCEEALATFKE-MQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSG 477
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
D + +TLV++Y++CG A +F+ +D + +N +I+ + E+A+++F
Sbjct: 478 YAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFM 537
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRA 542
+M + G K + TF++ +SA + ++ G++ S ET+ +I LYG+
Sbjct: 538 KMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTS-ETEVANALISLYGKC 596
Query: 543 NQLEKA 548
+E A
Sbjct: 597 GSIEDA 602
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 167/366 (45%), Gaps = 47/366 (12%)
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
++L +KN +V + +++ D VSW ++SGY Q G +E +L+ +
Sbjct: 85 IDLYAKNGLV----------WQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQ 134
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
M V + +S LSAC + + IH+ V K S FV + ++ +Y
Sbjct: 135 MHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALY----- 189
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
+G+ G+ + A R F + + V + L SG+ +
Sbjct: 190 -----------------------LGF---GSFKLAERVFCDMLFCDRVTFNTLISGHAQC 223
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
+ E + E + G+ D + + LL ACA L GK++H+Y+L+ G+ D
Sbjct: 224 GHGECALQIFDE-MQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYIT 282
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+L+D+Y KCG++ A IF ++VL+N+M+ Y K+ +F +M GI
Sbjct: 283 EGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGI 342
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY--ACMIDLYGRANQLEK 547
P+ T+ IL G +E+GE+ +S++ K E+D Y +ID+Y + L+K
Sbjct: 343 HPNKFTYPCILRTCTCTGQIELGEQ-IHSLS--IKNGFESDMYVSGVLIDMYSKYRCLDK 399
Query: 548 AIEFMK 553
A + ++
Sbjct: 400 ARKILE 405
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 141/326 (43%), Gaps = 34/326 (10%)
Query: 224 AVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNV-KCAKEIH 282
A S + ++ ++ + E+ L L + AL AC G N EIH
Sbjct: 7 AASLHRSLAKFIVPDNPEKILSLVAAKASHHRALGSADLTCALQACRGRGNRWPLVLEIH 66
Query: 283 SWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNME 342
+ + GL ++ + + ++D+Y K G +
Sbjct: 67 ATSVVRGLGADRLIGNLLIDLYAK-------------------------------NGLVW 95
Query: 343 EARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGAC 402
+AR+ F L+ ++ V W A+ SGY + + F L S+ + V+ +L +L AC
Sbjct: 96 QARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQ-MHWTAVIPTPYVLSSVLSAC 154
Query: 403 ALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYN 462
G+ IHA + + + + + L+ +Y G+ AE +F + + D V +N
Sbjct: 155 TKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFN 214
Query: 463 VMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTAD 522
+I+ +A GH E A+ +F+EM G++PD VT ++L+A G ++ G K +S
Sbjct: 215 TLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKG-KQLHSYLLK 273
Query: 523 YKISPETDHYACMIDLYGRANQLEKA 548
+S + ++DLY + +E A
Sbjct: 274 AGMSFDYITEGSLLDLYVKCGDIETA 299
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
++K+ H +A+K G T T N LI +Y K + +++ +F EM RN SWNTII+
Sbjct: 563 DIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIIT 622
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINA 100
+C + +A LFD + L + G + A
Sbjct: 623 SCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAA 658
>gi|147812109|emb|CAN61522.1| hypothetical protein VITISV_010801 [Vitis vinifera]
Length = 674
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 183/654 (27%), Positives = 304/654 (46%), Gaps = 97/654 (14%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H IK G NQ++H+Y K + K+FDEM
Sbjct: 96 HAHVIKLGXCNLLSLQNQVLHVYVKCKEFNDVCKMFDEM--------------------- 134
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAE-GYEADALKLFIEMQSADEHIRMDEFTVTST 131
P K++V++N+++CG + + L Q E + + T+
Sbjct: 135 ----------PLKNVVSWNTLICGVVEGNCKFALVRLGFHCFRQMVLEMMAPNCITLNGL 184
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L ++L +VG RQLH F++K+ D++ F S+L+D Y+K +EA F+ +
Sbjct: 185 LRASIELNDVGICRQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSR-- 242
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
D V WN ++S Y NG + +F M
Sbjct: 243 -------------------------------DLVLWNVMVSCYALNGVQGKAFGVFKLMR 271
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
GV+ + TF S +++C L + K++H +++ + V+S +VD+Y K EN+
Sbjct: 272 LEGVKGDXFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVASALVDMYSKNENI- 330
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
E+AR+ FD + KN+V WT + GY + +
Sbjct: 331 ------------------------------EDARKAFDGMJVKNIVSWTTMXVGYGQHGD 360
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
+ LL E + + D L L +L +C +A ++HAY++ G + + +
Sbjct: 361 GKEXMRLLQEMI-RVYTYPDELALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIAN 419
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
LV YSKCG++ A F + E D++ + ++ YA HG ++ + +FE++L ++P
Sbjct: 420 ALVSAYSKCGSIGSAFQSFSSVAEPDIISWTSLMGAYAFHGLSKQGVDVFEKILSSNVRP 479
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
D V F+ +LSA H G V G YFN M Y+I P+++HY +IDL GRA L++A+
Sbjct: 480 DKVAFLGVLSACAHGGFVLEGLHYFNLMINVYQIMPDSEHYTSIIDLLGRAGFLDEAVNL 539
Query: 552 MKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNW 611
+ S+P E + LG+FL C++ RN LA A EKL +E N +Y ++N+YA+ G+W
Sbjct: 540 LTSMPVEPRSDTLGAFLGACKVYRNVGLARWASEKLFVMEPNEPGKYSLMSNMYASVGHW 599
Query: 612 AEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFT 665
++ R+RK MR + GCSW+ E+H F D +HP+ +Y +L +
Sbjct: 600 FDVARVRKLMRERCDFKVPGCSWMETAGEVHTFVSRDKTHPRAVQVYGMLDLLV 653
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 182/445 (40%), Gaps = 107/445 (24%)
Query: 3 SLNLKEALIC---HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSW 59
S+ L + IC H +K+G + L+ Y+K L+ E++ FDE+ R++ W
Sbjct: 188 SIELNDVGICRQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLW 247
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N ++S C +N G + A +F M+ E
Sbjct: 248 NVMVS------------------------------CYALN--GVQGKAFGVFKLMRL--E 273
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
++ D FT TS +N C L + G G+Q+H +++ S D S+L+DMYSK E+A
Sbjct: 274 GVKGDXFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVASALVDMYSKNENIEDA 333
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
+ F+G +J KN VSW T+ GY Q+GD
Sbjct: 334 RKAFDG------MJVKN---------------------------IVSWTTMXVGYGQHGD 360
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
+E ++L M +E AS LS+C L ++H++V++NG + +++
Sbjct: 361 GKEXMRLLQEMIRVYTYPDELALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANA 420
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
+V Y KC G++ A + F S+ E +++ W
Sbjct: 421 LVSAYSKC-------------------------------GSIGSAFQSFSSVAEPDIISW 449
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
T+L Y + D+ E + V D + + +L ACA + G +H + L
Sbjct: 450 TSLMGAYAFHGLSKQGVDVF-EKILSSNVRPDKVAFLGVLSACAHGGFVLEG--LHYFNL 506
Query: 420 RMGVQM---DKKLISTLVDMYSKCG 441
+ V D + ++++D+ + G
Sbjct: 507 MINVYQIMPDSEHYTSIIDLLGRAG 531
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 137/297 (46%), Gaps = 40/297 (13%)
Query: 258 NEHTFAS-ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESM 316
+ H+F+S AL L + K++H+ V+K G + + + ++ VY KC+ N
Sbjct: 71 STHSFSSHALKISAKLGFLHGGKQLHAHVIKLGXCNLLSLQNQVLHVYVKCKEFN----- 125
Query: 317 LLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE-AL 375
+ + FD + KNVV W L G V+ NC+ AL
Sbjct: 126 --------------------------DVCKMFDEMPLKNVVSWNTLICGVVEG-NCKFAL 158
Query: 376 ----FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
F + V E + + + L LL A + +++H +IL+ G + + S
Sbjct: 159 VRLGFHCFRQMVL-EMMAPNCITLNGLLRASIELNDVGICRQLHCFILKSGFDSNCFVGS 217
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
LVD Y+K G + A+ F RDLVL+NVM++CYA +G + KA +F+ M +G+K
Sbjct: 218 ALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALNGVQGKAFGVFKLMRLEGVKG 277
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
D TF +++++ GS +G K + + + + ++D+Y + +E A
Sbjct: 278 DXFTFTSMINSCGVLGSCGLG-KQVHGLIIRLSFDLDVLVASALVDMYSKNENIEDA 333
>gi|225470674|ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 587
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 190/653 (29%), Positives = 316/653 (48%), Gaps = 74/653 (11%)
Query: 23 LTTITTNQLIHIYSKHNLLRESRKLFDEM----PERNVFSWNTIISACIKSHDLKQARSL 78
+ T T + L+H SK LR L + + +VF N +++ K AR +
Sbjct: 1 MITETLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQV 60
Query: 79 FDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKL 138
FD K+LV++++M+ GY A G A+ L+ +M + +E+ S ++ C L
Sbjct: 61 FDEMFEKNLVSWSAMISGYDQA-GEPQMAIDLYSQM-----FLVPNEYVFASVISACASL 114
Query: 139 LNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAM 198
V G+++H+ +K ++ F +SLI MY KC +A VF T E N +S NA
Sbjct: 115 SAVTLGQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTN-TPEPNCVSYNA- 172
Query: 199 VAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWN 258
LI+G+V+N E GL+ F M + G+ +
Sbjct: 173 -------------------------------LITGFVENQQLERGLEFFKLMRQQGLIPD 201
Query: 259 EHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLL 318
F L C N+K E+H +K L S PF+ + I+ +Y + +N
Sbjct: 202 RFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSE---LNL------ 252
Query: 319 LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDL 378
++EA + F + EK+V+ W L + + +
Sbjct: 253 ----------------------IQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRV 290
Query: 379 LSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYS 438
+ V D L ACA A++ GK+IHA+++R + D + + LV+MY+
Sbjct: 291 FKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYA 350
Query: 439 KCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVA 498
KCG + YA IF + +LV +N +IA + +HG E+A+ LFE+M GI+PD+VTF+
Sbjct: 351 KCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIG 410
Query: 499 ILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE 558
+L+A H G V+ G+ YFNSM Y I+P+ +H++C+ID+ GRA +L +A E+M+ P
Sbjct: 411 LLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFW 470
Query: 559 EDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIR 618
D V+L S L+ RL+ + + + LL+L+ + YV L+N+YA++G W + R
Sbjct: 471 NDPVVLVSLLSASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEAR 530
Query: 619 KQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEI 671
K+++G + G S + V + FT+GD +H + I +L + + E+
Sbjct: 531 KRLKGSGLKKEPGHSLIEVNGSVEKFTIGDFTHLRIKEIKGILKTLSWAVGEV 583
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 121/549 (22%), Positives = 205/549 (37%), Gaps = 145/549 (26%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +++K G + +N LI +Y K N ++ +F PE N S+N +I+ +++ L
Sbjct: 124 HSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQL 183
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
++ F + L+ D F L
Sbjct: 184 ERGLEFFKLMRQQGLIP----------------------------------DRFAFMGVL 209
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+C N+ G +LH VK + D++ F + +I MYS+ +EA + F EE ++
Sbjct: 210 GICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFR-LIEEKDV 268
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG- 251
IS N ++AAC D +GL++F M
Sbjct: 269 ISWNTLIAACS--------------------------------HCDDHAKGLRVFKHMTE 296
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
E VR ++ TF SAL+AC GL ++ K+IH+ +++ L + V + +V++Y KC +
Sbjct: 297 ETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIG 356
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
YA + F + N+V W + +G+
Sbjct: 357 YAYDI-------------------------------FSKMVHHNLVSWNTIIAGFGNHGL 385
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM----GVQMDK 427
E +L E + G+ D++ + LL AC + G+ Y M G+ D
Sbjct: 386 GERAVELF-EQMNASGIRPDSVTFIGLLTACNHAGLVDKGQ---LYFNSMEETYGIAPDI 441
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
+ S L+DM + G + AE + F +N
Sbjct: 442 EHFSCLIDMLGRAGRLNEAEEYMRKF-----PFWN------------------------- 471
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISP-ETDHYACMIDLYGRANQLE 546
D V V++LSA R G V +GE+ + K+ P T Y + +LY +
Sbjct: 472 ----DPVVLVSLLSASRLHGDVVIGERLAKWL---LKLQPVTTSPYVLLSNLYASDGMWD 524
Query: 547 KAIEFMKSI 555
E K +
Sbjct: 525 SVAEARKRL 533
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 117/265 (44%), Gaps = 66/265 (24%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
NLK H Q +K L T N +I +YS+ NL++E+ K F + E++V SWNT+I+
Sbjct: 217 NLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIA 276
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
AC D A L++F M + + ++R D
Sbjct: 277 ACSHCDD--------------------------------HAKGLRVFKHM-TEETNVRPD 303
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
+FT TS L C L ++ G+Q+HA +++T ++L++MY+KC C A +F
Sbjct: 304 DFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFS 363
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
NL+S WNT+I+G+ +G E +
Sbjct: 364 KMVHH-NLVS--------------------------------WNTIIAGFGNHGLGERAV 390
Query: 245 KLFVRMGENGVRWNEHTFASALSAC 269
+LF +M +G+R + TF L+AC
Sbjct: 391 ELFEQMNASGIRPDSVTFIGLLTAC 415
>gi|356519676|ref|XP_003528496.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 728
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 198/690 (28%), Positives = 341/690 (49%), Gaps = 76/690 (11%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
NV S N I+ K L++AR LFD P++ + ++N+M+ GY + G +AL L M
Sbjct: 40 NVISTNISIAQRFKMGKLEEARHLFDQMPNRTVSSWNTMISGY-SLLGRYPEALTLVSFM 98
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
+ + ++E + ++ L+ C + + G+Q+H+ ++K+ + G S+L+ C
Sbjct: 99 HRSC--VALNEVSFSAVLSACARSGSFLLGKQVHSLLLKSGYERFGLVGSALLYFCVHCC 156
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
EA VFE + N + + M+A ++ M+ A+ F + P + D V+W TLISGY
Sbjct: 157 GIREAEVVFEE-LRDGNQVLWSLMLAGYVKQDMMDDAMDMFEKMP-VRDVVAWTTLISGY 214
Query: 235 VQNGDA-EEGLKLFVRMGENG-VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
+ D E L LF M + V NE T + C L ++ K +H +K GL
Sbjct: 215 AKREDGCERALDLFGCMRRSSEVLPNEFTLDCVVRVCARLGVLRAGKVVHGLCIKGGLDF 274
Query: 293 NPFVSSGIVDVYCKCE----------------NMNYAESM---LLLKGV----------- 322
+ + + + YC CE ++N A S+ L+ KG
Sbjct: 275 DNSIGGAVTEFYCGCEAIDDAKRVYESMGGQASLNVANSLIGGLVSKGRIEEAELVFYEL 334
Query: 323 --RNSFSISSMIVGYSLQGNMEEARRHFDSLT---------------------------- 352
N S + MI GY++ G E+++R F+ ++
Sbjct: 335 RETNPVSYNLMIKGYAMSGQFEKSKRLFEKMSPENLTSLNTMISVYSKNGELDEAVKLFD 394
Query: 353 ----EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTD--ALILVILLGACALQA 406
E+N V W ++ SGY+ + +L +V + D +L AC+
Sbjct: 395 KTKGERNYVSWNSMMSGYIINGKYKEALNL---YVAMRRLSVDYSRSTFSVLFRACSCLC 451
Query: 407 ALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIA 466
+ G+ +HA++++ Q++ + + LVD YSKCG++ A+ F + ++ + +I
Sbjct: 452 SFRQGQLLHAHLIKTPFQVNVYVGTALVDFYSKCGHLAEAQRSFISIFSPNVAAWTALIN 511
Query: 467 CYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKIS 526
YA+HG +AILLF ML +GI P+A TFV +LSA H G V G + F+SM Y ++
Sbjct: 512 GYAYHGLGSEAILLFRSMLHQGIVPNAATFVGVLSACNHAGLVCEGLRIFHSMQRCYGVT 571
Query: 527 PETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEK 586
P +HY C++DL GR+ L++A EF+ +P E D +I G+ LN ++ E+ A EK
Sbjct: 572 PTIEHYTCVVDLLGRSGHLKEAEEFIIKMPIEADGIIWGALLNASWFWKDMEVGERAAEK 631
Query: 587 LLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTV 646
L L+ N +V L+N+YA G W + ++RK+++ ++ + GCSW+ + ++IH+F+V
Sbjct: 632 LFSLDPNPIFAFVVLSNMYAILGRWGQKTKLRKRLQSLELRKDPGCSWIELNNKIHLFSV 691
Query: 647 GDVSHPKTNAIYSVLAIFTGELYEIAGAFY 676
D +H ++ IY+ + T + I + Y
Sbjct: 692 EDKTHLYSDVIYATVEHITATINSIIPSNY 721
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 119/518 (22%), Positives = 215/518 (41%), Gaps = 99/518 (19%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K+G + + L++ +RE+ +F+E+ + N W+ +++ +K +
Sbjct: 130 HSLLLKSGYERFGLVGSALLYFCVHCCGIREAEVVFEELRDGNQVLWSLMLAGYVKQDMM 189
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
A +F+ P +D+V + +++ GY E AL LF M+ + E + +EFT+ +
Sbjct: 190 DDAMDMFEKMPVRDVVAWTTLISGYAKREDGCERALDLFGCMRRSSE-VLPNEFTLDCVV 248
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+C +L + G+ +H +K D ++ + Y C ++A RV+E + +L
Sbjct: 249 RVCARLGVLRAGKVVHGLCIKGGLDFDNSIGGAVTEFYCGCEAIDDAKRVYESMGGQASL 308
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELN------------------------------ 222
N+++ +G +E A F+ E N
Sbjct: 309 NVANSLIGGLVSKGRIEEAELVFYELRETNPVSYNLMIKGYAMSGQFEKSKRLFEKMSPE 368
Query: 223 DAVSWNTLISGYVQNGDAEEGLKLFVRM-GE-NGVRWN---------------------- 258
+ S NT+IS Y +NG+ +E +KLF + GE N V WN
Sbjct: 369 NLTSLNTMISVYSKNGELDEAVKLFDKTKGERNYVSWNSMMSGYIINGKYKEALNLYVAM 428
Query: 259 --------EHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
TF+ AC L + + + +H+ ++K N +V + +VD Y KC
Sbjct: 429 RRLSVDYSRSTFSVLFRACSCLCSFRQGQLLHAHLIKTPFQVNVYVGTALVDFYSKC--- 485
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV-KA 369
G++ EA+R F S+ NV WTAL +GY
Sbjct: 486 ----------------------------GHLAEAQRSFISIFSPNVAAWTALINGYAYHG 517
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR-MGVQMDKK 428
EA+ LL + +G+V +A V +L AC + G I + R GV +
Sbjct: 518 LGSEAI--LLFRSMLHQGIVPNAATFVGVLSACNHAGLVCEGLRIFHSMQRCYGVTPTIE 575
Query: 429 LISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMI 465
+ +VD+ + G++ A E I + IE D +++ ++
Sbjct: 576 HYTCVVDLLGRSGHLKEAEEFIIKMPIEADGIIWGALL 613
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 71/171 (41%), Gaps = 15/171 (8%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+ ++ + H IK + L+ YSK L E+++ F + NV +W +I+
Sbjct: 452 SFRQGQLLHAHLIKTPFQVNVYVGTALVDFYSKCGHLAEAQRSFISIFSPNVAAWTALIN 511
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINA---EGYEADALKLFIEMQSADEHI 121
+A LF S H+ +V + G ++A G + L++F MQ
Sbjct: 512 GYAYHGLGSEAILLFRSMLHQGIVPNAATFVGVLSACNHAGLVCEGLRIFHSMQRC---- 567
Query: 122 RMDEFTVTSTL---NLCVKLLN-VGFGRQLHAFMVKTSNDASGFAVSSLID 168
+ VT T+ V LL G ++ F++K +A G +L++
Sbjct: 568 ----YGVTPTIEHYTCVVDLLGRSGHLKEAEEFIIKMPIEADGIIWGALLN 614
>gi|242050128|ref|XP_002462808.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
gi|241926185|gb|EER99329.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
Length = 638
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 179/590 (30%), Positives = 288/590 (48%), Gaps = 37/590 (6%)
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
L AR LFD P D V YN+++ Y N+ +AL+L M I +EFT+
Sbjct: 62 LCHARRLFDGIPGPDRVMYNTIIRAYCNSS-CPREALRLHRGMLRRG--ILPNEFTLPFV 118
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
+ C +H ++ F ++L+ Y+ ++ R F+
Sbjct: 119 VKACTIAQAREHALAVHGVALRLGLVGQVFVGNALLHSYASAGSLGDSRRFFD------E 172
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
++ +N VSWN++I GY Q GD E LF M
Sbjct: 173 MVDRNV---------------------------VSWNSMIGGYAQAGDTREVCSLFGEMR 205
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
G +E T S L AC N++ + +H +L +G + + S +VD+Y KC ++
Sbjct: 206 RQGFLEDEFTLVSLLIACSQEGNLEIGRLVHCRMLVSGSRVDLILESALVDMYGKCGDLW 265
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
A + +++ S +SM+ + G++ AR FD + E+N+V W A+ S YV+
Sbjct: 266 MARRCFEMMPIKSVVSWTSMLCAQTKHGSVNAARCWFDHMPERNIVSWNAMISCYVQRGQ 325
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
C DL ++ + +G+ D + LV +L A L GK +H YI D L++
Sbjct: 326 CHEALDLYNQ-MQSQGLAPDEITLVAVLSASGRIGDLTVGKMVHLYIRDNIYNPDVSLVN 384
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
+L+DMY+KCG + A +F R++V +NV+I A HG I F M+ P
Sbjct: 385 SLLDMYAKCGQVDTAISLFSEMCNRNVVSWNVIIGGLAMHGRALDTITFFRSMVTDSFAP 444
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
D +TFVA+LSA H G +E G+ YF SM Y + E +HYACM+DL GR LEKA+
Sbjct: 445 DGITFVALLSACSHGGLLETGQHYFESMRHVYNVKHEVEHYACMVDLLGRRGHLEKAVCL 504
Query: 552 MKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNW 611
+K +P + D V+ G+ L CR++ N ++ + ++LL LEG + +V ++N+ W
Sbjct: 505 IKEMPMKPDVVVWGALLGACRIHGNVKIGRQVIKQLLELEGISGGLFVLISNLLYETHQW 564
Query: 612 AEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+M R+RK M+ + G S + + + IH F V D+ H +++ IY+V+
Sbjct: 565 EDMKRLRKLMKEWGTRKDMGVSSIEINNSIHEFGVEDIRHERSSEIYAVV 614
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 137/515 (26%), Positives = 217/515 (42%), Gaps = 105/515 (20%)
Query: 7 KEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISAC 66
+ AL H A++ GL N L+H Y+ L +SR+ FDEM +RNV SWN++I
Sbjct: 129 EHALAVHGVALRLGLVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMIGGY 188
Query: 67 IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEF 126
++ D ++ SLF G + +G F+E DEF
Sbjct: 189 AQAGDTREVCSLF----------------GEMRRQG--------FLE----------DEF 214
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
T+ S L C + N+ GR +H M+ + + S+L+DMY KC A R FE
Sbjct: 215 TLVSLLIACSQEGNLEIGRLVHCRMLVSGSRVDLILESALVDMYGKCGDLWMARRCFEMM 274
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
+ +++S +M+ A + G + A F PE N VSWN +IS YVQ G E L L
Sbjct: 275 PIK-SVVSWTSMLCAQTKHGSVNAARCWFDHMPERN-IVSWNAMISCYVQRGQCHEALDL 332
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVS--SGIVDVY 304
+ +M G+ +E T + LSA + ++ K +H ++ N I NP VS + ++D+Y
Sbjct: 333 YNQMQSQGLAPDEITLVAVLSASGRIGDLTVGKMVHLYIRDN--IYNPDVSLVNSLLDMY 390
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
KC ++ A S+ F + +NVV W +
Sbjct: 391 AKCGQVDTAISL-------------------------------FSEMCNRNVVSWNVIIG 419
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
G VT + D + V LL AC+ H +L G
Sbjct: 420 GLAMHGRALDTITFFRSMVT-DSFAPDGITFVALLSACS-----------HGGLLETG-- 465
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
+ ++ +Y+ ++ ++ Y M+ GH EKA+ L +EM
Sbjct: 466 --QHYFESMRHVYN---------------VKHEVEHYACMVDLLGRRGHLEKAVCLIKEM 508
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSM 519
+KPD V + A+L A R G+V++G + +
Sbjct: 509 ---PMKPDVVVWGALLGACRIHGNVKIGRQVIKQL 540
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 170/394 (43%), Gaps = 69/394 (17%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
NL+ + H + + +G + I + L+ +Y K L +R+ F+ MP ++V SW +++
Sbjct: 228 NLEIGRLVHCRMLVSGSRVDLILESALVDMYGKCGDLWMARRCFEMMPIKSVVSWTSMLC 287
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
A K + AR FD P +++V++N+M+ Y+ G +AL L+ +MQS + + D
Sbjct: 288 AQTKHGSVNAARCWFDHMPERNIVSWNAMISCYVQ-RGQCHEALDLYNQMQS--QGLAPD 344
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
E T+ + L+ ++ ++ G+ +H ++ + V+SL+DMY+KC
Sbjct: 345 EITLVAVLSASGRIGDLTVGKMVHLYIRDNIYNPDVSLVNSLLDMYAKC----------- 393
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
G+++ A+ F N VSWN +I G +G A + +
Sbjct: 394 ---------------------GQVDTAISLFSEMCNRN-VVSWNVIIGGLAMHGRALDTI 431
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
F M + + TF + LSAC H +L+ G
Sbjct: 432 TFFRSMVTDSFAPDGITFVALLSACS-----------HGGLLETG--------------- 465
Query: 305 CKCENMNYAESMLLLKGVRNSFS-ISSMIVGYSLQGNMEEARRHFDSLTEK-NVVVWTAL 362
+Y ESM + V++ + M+ +G++E+A + K +VVVW AL
Sbjct: 466 -----QHYFESMRHVYNVKHEVEHYACMVDLLGRRGHLEKAVCLIKEMPMKPDVVVWGAL 520
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILV 396
N + ++ + + EG+ +L+
Sbjct: 521 LGACRIHGNVKIGRQVIKQLLELEGISGGLFVLI 554
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 169/607 (27%), Positives = 305/607 (50%), Gaps = 70/607 (11%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
+V N ++S K L++AR +F KD VT+N+M+CGY +EA ++KLF++M
Sbjct: 256 DVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEA-SVKLFMDM 314
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
D ++TST+ C + ++ G+ +H +++ + + A + LIDMY+KC
Sbjct: 315 IDG---FVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCG 371
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
A VF+ + D+V+WN+LI+GY
Sbjct: 372 DLLAAQEVFD---------------------------------TTKCKDSVTWNSLINGY 398
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
Q+G +EGL+ F +M + + + TF LS L ++ + IH V+K G +
Sbjct: 399 TQSGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAEL 457
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
+ + ++DVY KC G M++ + F ++
Sbjct: 458 IIGNSLLDVYAKC-------------------------------GEMDDLLKVFSYMSAH 486
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
+++ W + + V +C F +++E T EG++ D ++ +L C+L A GKEI
Sbjct: 487 DIISWNTVIASSVHFDDCTVGFQMINEMRT-EGLMPDEATVLGILPMCSLLAVRRQGKEI 545
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
H YI + G + + + + L++MYSKCG++ +F+ E+D+V + +I+ + +G
Sbjct: 546 HGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEG 605
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC 534
+KA+ F++M G+ PD+V F+A + A H G V+ G ++F+ M DY + P +HYAC
Sbjct: 606 KKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYAC 665
Query: 535 MIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNN 594
++DL R+ L +A EF+ S+P + DA + G+ L+ CR N +A +K+L L ++
Sbjct: 666 VVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDD 725
Query: 595 KARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKT 654
YV ++N+YA G W ++ +R M+ + G SW+ ++ +++F GD S +
Sbjct: 726 TGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQY 785
Query: 655 NAIYSVL 661
+ + +L
Sbjct: 786 DKVKDLL 792
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 130/510 (25%), Positives = 226/510 (44%), Gaps = 102/510 (20%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEM-PERNVFSWNTII 63
N + H I +GL+L+ I + +LI Y++ S +F + P NV+ WN+II
Sbjct: 34 NTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSII 93
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
A +T+N + + A GY + EM+ ++ ++
Sbjct: 94 RA----------------------LTHNGL---FTQALGY-------YTEMR--EKKLQP 119
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
D FT S +N C ++L++ G +H ++ ++ + ++LIDMYS+ + A VF
Sbjct: 120 DAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVF 179
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
E EM+ + D+VSWN+LISGY NG E+
Sbjct: 180 E------------------------EMSNR---------DSVSWNSLISGYCSNGFWEDA 206
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
L ++ + G+ + T +S L AC L VK +H + K G+ + + +G++ +
Sbjct: 207 LDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSM 266
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y K E + A + V++S + ++MI GY+ G E + + F
Sbjct: 267 YFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLF--------------- 311
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
D++ +G V D L + + AC L GK +H Y++ G
Sbjct: 312 ------------MDMI------DGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGF 353
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
+ D + L+DMY+KCG++ A+ +F +D V +N +I Y G+ ++ + F +
Sbjct: 354 ECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESF-K 412
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
M++ KPD+VTFV +LS F + G
Sbjct: 413 MMKMERKPDSVTFVLLLSIFSQLADINQGR 442
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 153/352 (43%), Gaps = 43/352 (12%)
Query: 222 NDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEI 281
N+ WN++I NG + L + M E ++ + TF S +++C + +++ +
Sbjct: 84 NNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIV 143
Query: 282 HSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNM 341
H ++ G S+ ++ + ++D+Y + +++ A + R+S S +S+I GY G
Sbjct: 144 HEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFW 203
Query: 342 EEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGA 401
E+A D+ +F G+V D + +L A
Sbjct: 204 EDA-------------------------------LDMYHKF-RMTGMVPDCFTMSSVLLA 231
Query: 402 CALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLY 461
C A+ G +H I ++G+ D + + L+ MY K + A +F +D V +
Sbjct: 232 CGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTW 291
Query: 462 NVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTA 521
N MI YA G E ++ LF +M++ G PD ++I S R CG + G+
Sbjct: 292 NTMICGYAQLGRHEASVKLFMDMID-GFVPD---MLSITSTIRACG--QSGDLQVGKFVH 345
Query: 522 DYKISP--ETDHYAC--MIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLN 569
Y I E D AC +ID+Y + L A E + +D+V S +N
Sbjct: 346 KYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKC-KDSVTWNSLIN 396
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 107/241 (44%), Gaps = 38/241 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H IK G I N L+ +Y+K + + K+F M ++ SWNT+I+
Sbjct: 445 HCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIA-------- 496
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
SS H D T + + EG + DE TV L
Sbjct: 497 --------SSVHFDDCTVGFQMINEMRTEG------------------LMPDEATVLGIL 530
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+C L G+++H ++ K+ +++ ++LI+MYSKC E +VF+ E+ ++
Sbjct: 531 PMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEK-DV 589
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQP---ELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
++ A+++A GE + ALK F L D+V++ I +G +EGL+ F R
Sbjct: 590 VTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDR 649
Query: 250 M 250
M
Sbjct: 650 M 650
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 107/250 (42%), Gaps = 40/250 (16%)
Query: 263 ASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGV 322
+S L +N + +HS ++ +GL + S ++ Y + ++
Sbjct: 23 SSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKD------------- 69
Query: 323 RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF 382
ISS+ V S+ NV +W ++ ++A LF +
Sbjct: 70 ----PISSVSVFRSIS-------------PTNNVYLWNSI----IRALTHNGLFTQALGY 108
Query: 383 VTK---EGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
T+ + + DA ++ +CA L G +H + + MG + D + + L+DMYS+
Sbjct: 109 YTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSR 168
Query: 440 CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
++ A +F+ RD V +N +I+ Y +G E A+ ++ + G+ PD T ++
Sbjct: 169 FVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSV 228
Query: 500 LSAFRHCGSV 509
L A CGS+
Sbjct: 229 LLA---CGSL 235
>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 163/478 (34%), Positives = 264/478 (55%), Gaps = 2/478 (0%)
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
+L NA++ GE+ A K F + + D VSWN++I+GYV+ G A+E L+ +M
Sbjct: 189 DLFVHNAIIHVLVSCGELLAARKLF-DESCVRDLVSWNSIINGYVRCGLADEAFDLYYKM 247
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
GE V +E T +SA L N+ +++H + + GL +++ ++D+Y KC+N+
Sbjct: 248 GELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNI 307
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
A+ + + S ++M++GY+ G +E A R F+ + EK+VV+W AL G+V+A+
Sbjct: 308 EAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAK 367
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
+ L E + V D + +V L AC+ AL G +H Y+ + + M+ L
Sbjct: 368 RSKEALALFHE-MQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALG 426
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+ LVDMY+KCGN+ A +F+ R+ + + +I A HG AI F EM+ G+
Sbjct: 427 TALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLV 486
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
PD +TF+ +LSA H G V+ G YF MT+ Y ISP+ HY+C++DL GRA LE+A E
Sbjct: 487 PDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEE 546
Query: 551 FMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGN 610
++S+P E DAV+ G+ R++ N + A KLL L+ ++ YV LAN+Y
Sbjct: 547 LIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVLLANMYGDANM 606
Query: 611 WAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
W + ++RK M + GCS + + ++ F + D SHP++ IY L T ++
Sbjct: 607 WEQARKVRKMMEERGVEKTPGCSSIEMNGLVYDFIIRDKSHPQSEKIYECLTRLTRQI 664
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 132/498 (26%), Positives = 227/498 (45%), Gaps = 76/498 (15%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
+ ++F N II + +L AR LFD S +DLV++NS++ GY+ G +A L+
Sbjct: 187 DSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRC-GLADEAFDLYY 245
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
+M + ++ DE T+ ++ +L N+ GR+LH + + + + ++L+DMY K
Sbjct: 246 KM--GELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIK 303
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C+ E A +FE T++ ++S MV + G +E A++ F PE D V WN LI
Sbjct: 304 CKNIEAAKILFENMTKK-TVVSWTTMVIGYAKFGLLESAVRLFNEMPE-KDVVLWNALIG 361
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
G+VQ ++E L LF M + V ++ T + LSAC L + +H +V K+ L
Sbjct: 362 GFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTM 421
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
N + + +VD+Y KC N+ A + RNS + +++I G +L G A +F
Sbjct: 422 NVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYF---- 477
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
SE ++ G+V D + + +L AC + G+
Sbjct: 478 ---------------------------SEMISI-GLVPDEITFIGVLSACCHGGLVDQGR 509
Query: 413 E-IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
+ + + G+ K S LVD+ + G + AE + ++
Sbjct: 510 DYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRS------------------- 550
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISP-ETD 530
+ FE PDAV + A+ R G+V MGE+ + + ++ P +
Sbjct: 551 -------MPFE--------PDAVVWGALFFGSRIHGNVHMGERAASKLL---ELDPHDGG 592
Query: 531 HYACMIDLYGRANQLEKA 548
Y + ++YG AN E+A
Sbjct: 593 IYVLLANMYGDANMWEQA 610
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/469 (22%), Positives = 190/469 (40%), Gaps = 99/469 (21%)
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
H+ + + S L C + + +++HA M+ T + GFA+S L+ C
Sbjct: 49 HVLIQSNPLLSLLEACTSMAKM---KEIHAQMISTGLISDGFALSRLVAF-----CAISE 100
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
R + C + +N LN SWN I GYV++ +
Sbjct: 101 WRNLDYCDKILN-------------------------NAANLN-XFSWNMAIRGYVESEN 134
Query: 240 AEEGLKLFVRMGENG-VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
+ L+ M G + +T+ C G A EI V++ G S+ FV +
Sbjct: 135 PINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGHVIQLGFDSDLFVHN 194
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
I+ V C G + AR+ FD +++V
Sbjct: 195 AIIHVLVSC-------------------------------GELLAARKLFDESCVRDLVS 223
Query: 359 WTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
W ++ +GYV+ + FDL + + + V+ D + ++ ++ A A L G+++H I
Sbjct: 224 WNSIINGYVRCGLADEAFDLYYK-MGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSI 282
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
MG+ + L + L+DMY KC N+ A+I+F+N ++ +V + M+ YA G E A+
Sbjct: 283 EEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAV 342
Query: 479 LLFEEMLEK-------------------------------GIKPDAVTFVAILSAFRHCG 507
LF EM EK + PD +T V LSA G
Sbjct: 343 RLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLG 402
Query: 508 SVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIP 556
++++G + + + ++ ++D+Y + ++KAI+ + +P
Sbjct: 403 ALDVG-IWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMP 450
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 152/351 (43%), Gaps = 75/351 (21%)
Query: 20 GLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLF 79
GL LT N L+ +Y K + ++ LF+ M ++ V SW T++ K L+ A LF
Sbjct: 286 GLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLF 345
Query: 80 DSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLL 139
+ P KD+V +N+++ G++ A+ +AL LF EMQ++ + D+ TV + L+ C +L
Sbjct: 346 NEMPEKDVVLWNALIGGFVQAK-RSKEALALFHEMQASS--VAPDKITVVNCLSACSQLG 402
Query: 140 NVGFGRQLHAFMVK---TSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKN 196
+ G +H ++ K T N A G ++L+DMY+KC ++A +VFE
Sbjct: 403 ALDVGIWMHHYVDKHNLTMNVALG---TALVDMYAKCGNIKKAIQVFE------------ 447
Query: 197 AMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVR 256
EM + ++++W +I G +G + F M G+
Sbjct: 448 ------------EMPGR---------NSLTWTAIICGLALHGQPHAAISYFSEMISIGLV 486
Query: 257 WNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESM 316
+E TF LSACC G+VD + +Y M
Sbjct: 487 PDEITFIGVLSACC--------------------------HGGLVD-----QGRDYFYQM 515
Query: 317 LLLKGVRNSFSISSMIVG-YSLQGNMEEARRHFDSLT-EKNVVVWTALFSG 365
G+ S +V G +EEA S+ E + VVW ALF G
Sbjct: 516 TSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFG 566
>gi|225452922|ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Vitis vinifera]
Length = 594
Score = 291 bits (746), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 200/642 (31%), Positives = 304/642 (47%), Gaps = 97/642 (15%)
Query: 27 TTNQLIHIYS---KHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP 83
+ NQ+ I++ K NL RES F +I+A + A ++F+
Sbjct: 29 SLNQVKQIHAQVLKANLHRES------------FVGQKLIAAFSLCRQMTLAVNVFNQIQ 76
Query: 84 HKDLVTYNSMLCGYI-NAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVG 142
D++ YN+++ ++ N+E A +F EMQ D + D FT L C + V
Sbjct: 77 DPDVLLYNTLIRAHVRNSEPLLA--FSVFFEMQ--DSGVCADNFTYPFLLKACSGKVWVR 132
Query: 143 FGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRC--YEEACRVFEGCTEEVNLISKNAMVA 200
+HA + K F +SLID Y KC A +VFE E
Sbjct: 133 VVEMIHAQVEKMGFCLDIFVPNSLIDSYFKCGLDGVAAARKVFEVMAER----------- 181
Query: 201 ACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE-NGVRWNE 259
D VSWN++I G V+ G+ E +LF M E + V WN
Sbjct: 182 ----------------------DTVSWNSMIGGLVKVGELGEARRLFDEMPERDTVSWNT 219
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLL 319
I+D Y K MN A +
Sbjct: 220 ----------------------------------------ILDGYVKAGEMNAAFELFEK 239
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLL 379
RN S S+M++GYS G+M+ AR FD + KN+V WT + SGY + + +L
Sbjct: 240 MPARNVVSWSTMVLGYSKAGDMDMARILFDKMPVKNLVPWTIMISGYAEKGLAKDAINLY 299
Query: 380 SEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
++ + + G+ D ++ +L ACA+ L GK +HA I R + + + L+DMY+K
Sbjct: 300 NQ-MEEAGLKFDDGTVISILSACAVSGLLGLGKRVHASIERTRFKCSTPVSNALIDMYAK 358
Query: 440 CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
CG++ A IF + +D+V +N +I A HGH EKA+ LF M +G PD VTFV +
Sbjct: 359 CGSLENALSIFHGMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVGV 418
Query: 500 LSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE 559
L A H G V+ G YF++M DY + PE +HY CM+DL GR +L++A + S+P E
Sbjct: 419 LCACTHAGFVDEGLHYFHAMERDYGVPPEVEHYGCMVDLLGRGGRLKEAFRLVHSMPLEP 478
Query: 560 DAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRK 619
+A+I G+ L CR++ LA E ++L++ E ++ L+N+YAA G+W IR
Sbjct: 479 NAIIWGTLLGACRMHSATGLAEEVFDRLVKSELSDSGNLSMLSNIYAAAGDWDNFANIRL 538
Query: 620 QMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+M+ + +G S + V+ E+H FTV D SHPK++ IY +
Sbjct: 539 RMKSTSIQKPSGGSSIEVDDEVHEFTVFDRSHPKSDRIYKTI 580
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 120/245 (48%), Gaps = 36/245 (14%)
Query: 25 TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPH 84
T++ N ++ Y K + + +LF++MP RNV SW+T++ K+ D+ AR LFD P
Sbjct: 214 TVSWNTILDGYVKAGEMNAAFELFEKMPARNVVSWSTMVLGYSKAGDMDMARILFDKMPV 273
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
K+LV + M+ GY +G DA+ L+ +M+ A ++ D+ TV S L+ C +G G
Sbjct: 274 KNLVPWTIMISGYAE-KGLAKDAINLYNQMEEAG--LKFDDGTVISILSACAVSGLLGLG 330
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
+++HA + +T S ++LIDMY+KC E A +F G +
Sbjct: 331 KRVHASIERTRFKCSTPVSNALIDMYAKCGSLENALSIFHGMVRK--------------- 375
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFAS 264
D VSWN +I G +G E+ L+LF RM G ++ TF
Sbjct: 376 ------------------DVVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVG 417
Query: 265 ALSAC 269
L AC
Sbjct: 418 VLCAC 422
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 125/260 (48%), Gaps = 38/260 (14%)
Query: 25 TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACI----------------- 67
T++ N +I K L E+R+LFDEMPER+ SWNTI+ +
Sbjct: 183 TVSWNSMIGGLVKVGELGEARRLFDEMPERDTVSWNTILDGYVKAGEMNAAFELFEKMPA 242
Query: 68 --------------KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIE 113
K+ D+ AR LFD P K+LV + M+ GY +G DA+ L+ +
Sbjct: 243 RNVVSWSTMVLGYSKAGDMDMARILFDKMPVKNLVPWTIMISGYAE-KGLAKDAINLYNQ 301
Query: 114 MQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKC 173
M+ A ++ D+ TV S L+ C +G G+++HA + +T S ++LIDMY+KC
Sbjct: 302 MEEAG--LKFDDGTVISILSACAVSGLLGLGKRVHASIERTRFKCSTPVSNALIDMYAKC 359
Query: 174 RCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPE---LNDAVSWNTL 230
E A +F G + +++S NA++ G E AL+ F R + D V++ +
Sbjct: 360 GSLENALSIFHGMVRK-DVVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVGV 418
Query: 231 ISGYVQNGDAEEGLKLFVRM 250
+ G +EGL F M
Sbjct: 419 LCACTHAGFVDEGLHYFHAM 438
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 118/531 (22%), Positives = 219/531 (41%), Gaps = 86/531 (16%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R +L + H Q +KA L + +LI +S + + +F+++ + +V +NT
Sbjct: 26 RCSSLNQVKQIHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQDPDVLLYNT 85
Query: 62 IISACIKSHDLKQARSLF----DSSPHKDLVTYN---------------SMLCGYINAEG 102
+I A +++ + A S+F DS D TY M+ + G
Sbjct: 86 LIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQVEKMG 145
Query: 103 YEADALKLFIEMQSADEHIR------------------MDEFTVTSTLNLCVKLLNVGFG 144
+ L +F+ D + + D + S + VK+ +G
Sbjct: 146 F---CLDIFVPNSLIDSYFKCGLDGVAAARKVFEVMAERDTVSWNSMIGGLVKVGELGEA 202
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
R+L M + + ++++D Y K A +FE N++S + MV +
Sbjct: 203 RRLFDEMPERDT----VSWNTILDGYVKAGEMNAAFELFEKMPAR-NVVSWSTMVLGYSK 257
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFAS 264
G+M+MA F + P + + V W +ISGY + G A++ + L+ +M E G+++++ T S
Sbjct: 258 AGDMDMARILFDKMP-VKNLVPWTIMISGYAEKGLAKDAINLYNQMEEAGLKFDDGTVIS 316
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
LSAC + K +H+ + + + VS+ ++D+Y KC
Sbjct: 317 ILSACAVSGLLGLGKRVHASIERTRFKCSTPVSNALIDMYAKC----------------- 359
Query: 325 SFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVT 384
G++E A F + K+VV W A+ G + E L S +
Sbjct: 360 --------------GSLENALSIFHGMVRKDVVSWNAIIQGLAMHGHGEKALQLFSR-MK 404
Query: 385 KEGVVTDALILVILLGACALQAALHPGKE-IHAYILRMGVQMDKKLISTLVDMYSKCGNM 443
EG V D + V +L AC + G HA GV + + +VD+ + G +
Sbjct: 405 GEGFVPDKVTFVGVLCACTHAGFVDEGLHYFHAMERDYGVPPEVEHYGCMVDLLGRGGRL 464
Query: 444 TYA-EIIFQNFIERDLVLYNVMI-ACYAHHGHEEKAILLFEEMLEKGIKPD 492
A ++ +E + +++ ++ AC H A L EE+ ++ +K +
Sbjct: 465 KEAFRLVHSMPLEPNAIIWGTLLGACRMH-----SATGLAEEVFDRLVKSE 510
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%)
Query: 406 AALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMI 465
++L+ K+IHA +L+ + + + L+ +S C MT A +F + D++LYN +I
Sbjct: 28 SSLNQVKQIHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQDPDVLLYNTLI 87
Query: 466 ACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
+ + A +F EM + G+ D T+ +L A
Sbjct: 88 RAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKA 124
>gi|357159954|ref|XP_003578611.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 600
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 189/649 (29%), Positives = 304/649 (46%), Gaps = 117/649 (18%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERN--VFSWNTIISACIKSH 70
H Q +K GL L + ++L+ Y+ H L SR +F P + F NT++ A +
Sbjct: 44 HAQLLKHGLHLDPVAASKLLSSYALHRRLPASRGVFASFPNPHATTFLPNTLLRAYALNA 103
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
++A ++F + PH+D TY S L +++ G
Sbjct: 104 LPREAVAVFSAMPHRDSFTY-SFLIKALSSAG---------------------------- 134
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
V R +H+ +VK + + ++LID YSK + +A +VFE
Sbjct: 135 ----------VAPLRAVHSHVVKLGSIEDTYVGNALIDAYSKNGGFSDASKVFE------ 178
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
EM + D VSWN+ ++ V+ G+ E ++F M
Sbjct: 179 ------------------EMPRR---------DVVSWNSAMAAMVRQGEVEGARRMFDEM 211
Query: 251 GE-NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
E + V WN ++D Y K +
Sbjct: 212 LEKDTVSWNT----------------------------------------LLDGYTKAGD 231
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
+ A + RN S S+++ GY +G+ME AR FD + KN+V WT + S +
Sbjct: 232 VEEAFKLFQCMPERNVVSWSTVVSGYCKKGDMEMARVIFDKMPTKNLVTWTIMVSACAQN 291
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
E L ++ + + V D +V +L ACA +L GK IH Y+ + +
Sbjct: 292 GLVEEAGKLFTQ-MKEASVELDVAAVVSILAACAESGSLALGKRIHRYVRTRQLGRSTHV 350
Query: 430 ISTLVDMYSKCGNMTYAEIIFQN-FIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
+ L+DM+ KCG + A+ +F +E+D V +N +I +A HGH +KA+ F +M +G
Sbjct: 351 CNALIDMFCKCGCINRADYVFDTEIVEKDSVSWNTIIGGFAMHGHGDKALDFFAQMKLQG 410
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
PDAVT + +LSA H G VE G +YF +M DY + P+ +HY CMIDL GR +++A
Sbjct: 411 FCPDAVTMINVLSACTHMGFVEEGRRYFANMERDYGVVPQIEHYGCMIDLLGRGGLIKEA 470
Query: 549 IEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAE 608
++ +KS+P + + VI GS L+ CRL++N E A A +L +L+ +N Y L+++YA
Sbjct: 471 VDLIKSMPWDPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSSIYAEA 530
Query: 609 GNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
G W++M + R QM+G + +G SW+ ++ H FTVGD HP ++ I
Sbjct: 531 GKWSDMAKARMQMKGTGSQKSSGSSWIELDEAFHEFTVGDRKHPDSDQI 579
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 132/314 (42%), Gaps = 49/314 (15%)
Query: 271 GLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESML--LLKGVRNSFSI 328
GL + +E+H+ +LK+GL +P +S ++ Y + + + +F
Sbjct: 33 GLPRLHHLQELHAQLLKHGLHLDPVAASKLLSSYALHRRLPASRGVFASFPNPHATTFLP 92
Query: 329 SSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGV 388
++++ Y+L EA F ++ ++ ++ L +KA +
Sbjct: 93 NTLLRAYALNALPREAVAVFSAMPHRDSFTYSFL----IKALS----------------- 131
Query: 389 VTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEI 448
A + P + +H++++++G D + + L+D YSK G + A
Sbjct: 132 ----------------SAGVAPLRAVHSHVVKLGSIEDTYVGNALIDAYSKNGGFSDASK 175
Query: 449 IFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGS 508
+F+ RD+V +N +A G E A +F+EMLEK D V++ +L + G
Sbjct: 176 VFEEMPRRDVVSWNSAMAAMVRQGEVEGARRMFDEMLEK----DTVSWNTLLDGYTKAGD 231
Query: 509 VEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFL 568
VE K F M +S ++ ++ Y + +E A +PT ++ V +
Sbjct: 232 VEEAFKLFQCMPERNVVS-----WSTVVSGYCKKGDMEMARVIFDKMPT-KNLVTWTIMV 285
Query: 569 NVCRLNRNAELAGE 582
+ C N E AG+
Sbjct: 286 SACAQNGLVEEAGK 299
>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 163/478 (34%), Positives = 264/478 (55%), Gaps = 2/478 (0%)
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
+L NA++ GE+ A K F + + D VSWN++I+GYV+ G A+E L+ +M
Sbjct: 189 DLFVHNAIIHVLVSCGELLAARKLF-DESCVRDLVSWNSIINGYVRCGLADEAFDLYYKM 247
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
GE V +E T +SA L N+ +++H + + GL +++ ++D+Y KC+N+
Sbjct: 248 GELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNI 307
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
A+ + + S ++M++GY+ G +E A R F+ + EK+VV+W AL G+V+A+
Sbjct: 308 EAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAK 367
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
+ L E + V D + +V L AC+ AL G +H Y+ + + M+ L
Sbjct: 368 RSKEALALFHE-MQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALG 426
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+ LVDMY+KCGN+ A +F+ R+ + + +I A HG AI F EM+ G+
Sbjct: 427 TALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLV 486
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
PD +TF+ +LSA H G V+ G YF MT+ Y ISP+ HY+C++DL GRA LE+A E
Sbjct: 487 PDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEE 546
Query: 551 FMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGN 610
++S+P E DAV+ G+ R++ N + A KLL L+ ++ YV LAN+Y
Sbjct: 547 LIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVLLANMYGDANM 606
Query: 611 WAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
W + ++RK M + GCS + + ++ F + D SHP++ IY L T ++
Sbjct: 607 WEQARKVRKMMEERGVEKTPGCSSIEMNGLVYDFIIRDKSHPQSEKIYECLTRLTRQI 664
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 134/536 (25%), Positives = 227/536 (42%), Gaps = 107/536 (19%)
Query: 15 QAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQ 74
I+ G N +IH+ L +RKLFDE R++ SWN+II+
Sbjct: 180 HVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIIN---------- 229
Query: 75 ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNL 134
GY+ G +A L+ +M + ++ DE T+ ++
Sbjct: 230 ---------------------GYVRC-GLADEAFDLYYKM--GELNVMPDEVTMIGVVSA 265
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
+L N+ GR+LH + + + + ++L+DMY KC+ E A +FE T++ ++S
Sbjct: 266 SAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKK-TVVS 324
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
MV + G +E A++ F PE D V WN LI G+VQ ++E L LF M +
Sbjct: 325 WTTMVIGYAKFGLLESAVRLFNEMPE-KDVVLWNALIGGFVQAKRSKEALALFHEMQASS 383
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
V ++ T + LSAC L + +H +V K+ L N + + +VD+Y KC N+ A
Sbjct: 384 VAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAI 443
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEA 374
+ RNS + +++I G +L G A +F
Sbjct: 444 QVFEEMPGRNSLTWTAIICGLALHGQPHAAISYF-------------------------- 477
Query: 375 LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE-IHAYILRMGVQMDKKLISTL 433
SE ++ G+V D + + +L AC + G++ + + G+ K S L
Sbjct: 478 -----SEMISI-GLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCL 531
Query: 434 VDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDA 493
VD+ + G + AE + ++ + FE PDA
Sbjct: 532 VDLLGRAGFLEEAEELIRS--------------------------MPFE--------PDA 557
Query: 494 VTFVAILSAFRHCGSVEMGEKYFNSMTADYKISP-ETDHYACMIDLYGRANQLEKA 548
V + A+ R G+V MGE+ + + ++ P + Y + ++YG AN E+A
Sbjct: 558 VVWGALFFGSRIHGNVHMGERAASKLL---ELDPHDGGIYVLLANMYGDANMWEQA 610
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 182/602 (30%), Positives = 298/602 (49%), Gaps = 77/602 (12%)
Query: 69 SHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEG-YEADALKLFIEMQSADEHIRMDEFT 127
S DL AR LF + D N+M+ GY ++ YEA +L F+ + + +D +T
Sbjct: 58 SGDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFM----VERGVPVDNYT 113
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
L C +L V GR+ H ++K + F +++LI Y C + AC VF+ T
Sbjct: 114 YPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDEST 173
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
+ D V+WN +I+ ++ G +E+ L
Sbjct: 174 ---------------------------------VRDVVTWNIMINAHLNKGLSEKAFDLL 200
Query: 248 VRMGE-NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
M + + +R +E T S + AC L N++ K +HS+ + GL N V++ I+D+YCK
Sbjct: 201 DEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCK 260
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
C+++ E A+ F+ + EK+V+ WT++ SG
Sbjct: 261 CDDI-------------------------------ESAQEVFNRIREKDVLSWTSMLSGL 289
Query: 367 VKA---QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
K+ Q ALF + + + D + LV +L ACA AL GK IH I + +
Sbjct: 290 AKSGYFQEALALF----QKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEI 345
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
D L + LVDMY+KCG++ A +F+ R++ +N +I A HGH E AI LF++
Sbjct: 346 NCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQ 405
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRAN 543
M + PD VTF+A+L A H G V+ G F +M ++I P +HY C++DL RA
Sbjct: 406 MEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRAR 465
Query: 544 QLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLAN 603
+++ A+ F++++P + ++V+ + L CR + +LA + +++ LE ++ RYV L+N
Sbjct: 466 KVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSN 525
Query: 604 VYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAI 663
+YA W ++RKQM+ + GCSW+ + IH F GD SH +T IY+++
Sbjct: 526 LYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEE 585
Query: 664 FT 665
T
Sbjct: 586 MT 587
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 172/355 (48%), Gaps = 33/355 (9%)
Query: 201 ACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEH 260
A G++ A K F Q + D NT+I GY ++ + E + L+ M E GV + +
Sbjct: 54 ALSHSGDLNYARKLF-TQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNY 112
Query: 261 TFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLK 320
T+ L+AC L VK + H VLKNG S+ FV + ++ Y C
Sbjct: 113 TYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNC------------- 159
Query: 321 GVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLS 380
SF + + FD T ++VV W + + ++ E FDLL
Sbjct: 160 ---GSFGCACDV---------------FDESTVRDVVTWNIMINAHLNKGLSEKAFDLLD 201
Query: 381 EFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC 440
E + + D + +V L+ ACA L GK +H+Y +G+ + ++ + ++DMY KC
Sbjct: 202 EMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKC 261
Query: 441 GNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAIL 500
++ A+ +F E+D++ + M++ A G+ ++A+ LF++M I+ D +T V +L
Sbjct: 262 DDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVL 321
Query: 501 SAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSI 555
SA G+++ G KY + + ++I+ + ++D+Y + ++ A++ + +
Sbjct: 322 SACAQTGALDQG-KYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRM 375
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 122/508 (24%), Positives = 225/508 (44%), Gaps = 65/508 (12%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
RS N EA+ + ++ G+ + T ++ ++ ++ R+ E+ + S
Sbjct: 88 RSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLF 147
Query: 62 IISACIKSH----DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSA 117
+I+A I+ + A +FD S +D+VT+N M+ ++N +G A L EM
Sbjct: 148 VINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLN-KGLSEKAFDLLDEMTKL 206
Query: 118 DEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYE 177
D ++R DE T+ S + C +L N+ G+ LH++ + D + ++++DMY KC E
Sbjct: 207 D-NLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIE 265
Query: 178 EACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQN 237
A VF E+ D +SW +++SG ++
Sbjct: 266 SAQEVFNRIREK---------------------------------DVLSWTSMLSGLAKS 292
Query: 238 GDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVS 297
G +E L LF +M N + +E T LSAC + K IH + K + + +
Sbjct: 293 GYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLE 352
Query: 298 SGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVV 357
+ +VD+Y KC +++ A + VRN F+ +++I G ++ G+ E+A FD + ++
Sbjct: 353 TALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLM 412
Query: 358 VWTALFSGYVKAQNCEALFD--------LLSEFVTKEGVVTDALILVILLGACALQAALH 409
F + A + L D + ++F + + ++ +L A + AL
Sbjct: 413 PDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDAL- 471
Query: 410 PGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIE-------RDLVLYN 462
A+I M ++ + L +TL+ G+ AE I + IE R ++L N
Sbjct: 472 ------AFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSN 525
Query: 463 VMIACYAHHGHEEKAILLFEEMLEKGIK 490
+ YA + A+ L ++M KGI+
Sbjct: 526 L----YAGVSQWDHALKLRKQMKNKGIE 549
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 135/294 (45%), Gaps = 35/294 (11%)
Query: 278 AKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSL 337
K+ H+ +L+ L+ NP SS ++ SF + S
Sbjct: 27 TKQAHALLLRTHLLHNPLFSSKLI-----------------------SF------LALSH 57
Query: 338 QGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC-EALFDLLSEFVTKEGVVTDALILV 396
G++ AR+ F + + + + GY ++QN EA+ L F+ + GV D
Sbjct: 58 SGDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVS--LYYFMVERGVPVDNYTYP 115
Query: 397 ILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER 456
+L ACA A+ G+ H +L+ G D +I+ L+ Y CG+ A +F R
Sbjct: 116 FVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVR 175
Query: 457 DLVLYNVMIACYAHHGHEEKAILLFEEMLE-KGIKPDAVTFVAILSAFRHCGSVEMGEKY 515
D+V +N+MI + + G EKA L +EM + ++PD VT V+++ A G++E G K+
Sbjct: 176 DVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERG-KF 234
Query: 516 FNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLN 569
+S + + + ++D+Y + + +E A E I E+D + S L+
Sbjct: 235 LHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRI-REKDVLSWTSMLS 287
>gi|225451356|ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Vitis vinifera]
Length = 654
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 160/476 (33%), Positives = 266/476 (55%), Gaps = 5/476 (1%)
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
+N ++ +M +A + F +Q DAVS+N +I GY + G E LK M G
Sbjct: 165 QNTLMKIYLENEKMGLAYQVF-QQMAAPDAVSFNIMIFGYAKKGHNIEALKFLHEMVGLG 223
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI--SNPFVSSGIVDVYCKCENMNY 312
++ +E T L C L + + K +H+W+ + GLI SN +++ ++D+Y KC+ +
Sbjct: 224 LKPDEFTMLGLLICCGRLGDAQLGKSVHAWIERRGLIKSSNLILNNALLDMYVKCKELRI 283
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
A+S+ + +++ S ++MI GY+ GN+E A F+ + +++V W ++ +GY + +C
Sbjct: 284 AQSIFNVIVRKDTISWNTMIAGYAKVGNLEIAHNFFEDMPCRDLVSWNSIIAGYAQKGDC 343
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
+ L E + E + D + ++ L+ A A ALH G+ IH +++RM +++D L S
Sbjct: 344 -LMVQRLFENMVAENIWPDFVTIINLVSAAAEIGALHHGRWIHGWVVRMQMKIDAFLGSA 402
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
+DMY KCG++ A ++F+ E+D+ ++ MI +A HG+ KA+ LF EM E + P+
Sbjct: 403 FIDMYWKCGSIKRACMVFREVTEKDVTVWTTMITGFAFHGYGSKALQLFYEMQEY-VMPN 461
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
VTFVA+L+A H G V G + FNSM Y I P +HY C++DL GR+ + + + +
Sbjct: 462 QVTFVAVLTACSHSGFVSQGLRIFNSMKERYGIEPGVEHYGCLVDLLGRSGRFSEVKDVI 521
Query: 553 KSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWA 612
+ +P + I G+ L+ CR N E+A A ++LL+LE + YV L+N+YA G W
Sbjct: 522 EMMPMKPSRSIWGAVLSACRAYGNIEIAEIAGKELLKLEPEKEGGYVLLSNIYATSGRWK 581
Query: 613 EMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
+IR+ M + AGCS V V+ IH F D HP+ I S+L E+
Sbjct: 582 HSDKIREIMESRGVKKTAGCSSVVVDGIIHEFVAADKRHPRWIEIQSILFCLKSEM 637
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 127/512 (24%), Positives = 225/512 (43%), Gaps = 88/512 (17%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
NT++ +++ + A +F D V++N M+ GY +G+ +ALK EM
Sbjct: 166 NTLMKIYLENEKMGLAYQVFQQMAAPDAVSFNIMIFGYAK-KGHNIEALKFLHEMVGLG- 223
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAF-----MVKTSNDASGFAVSSLIDMYSKCR 174
++ DEFT+ L C +L + G+ +HA+ ++K+SN ++L+DMY KC+
Sbjct: 224 -LKPDEFTMLGLLICCGRLGDAQLGKSVHAWIERRGLIKSSNLILN---NALLDMYVKCK 279
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
A +F + + IS N M+A + G +E+A F P D VSWN++I+GY
Sbjct: 280 ELRIAQSIFNVIVRK-DTISWNTMIAGYAKVGNLEIAHNFFEDMP-CRDLVSWNSIIAGY 337
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
Q GD +LF M + + T + +SA + + + IH WV++ + +
Sbjct: 338 AQKGDCLMVQRLFENMVAENIWPDFVTIINLVSAAAEIGALHHGRWIHGWVVRMQMKIDA 397
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
F+ S +D+Y KC G+++ A F +TEK
Sbjct: 398 FLGSAFIDMYWKC-------------------------------GSIKRACMVFREVTEK 426
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
+V VWT + +G+ L E +E V+ + + V +L AC+ + G I
Sbjct: 427 DVTVWTTMITGFAFHGYGSKALQLFYEM--QEYVMPNQVTFVAVLTACSHSGFVSQGLRI 484
Query: 415 -HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH 473
++ R G++ + LVD+ + G ++E+ +D++
Sbjct: 485 FNSMKERYGIEPGVEHYGCLVDLLGRSGR--FSEV-------KDVI-------------- 521
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD-HY 532
EM+ +KP + A+LSA R G++E+ E + K+ PE + Y
Sbjct: 522 ---------EMMP--MKPSRSIWGAVLSACRAYGNIEIAEIAGKELL---KLEPEKEGGY 567
Query: 533 ACMIDLY---GRANQLEKAIEFMKSIPTEEDA 561
+ ++Y GR +K E M+S ++ A
Sbjct: 568 VLLSNIYATSGRWKHSDKIREIMESRGVKKTA 599
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 122/265 (46%), Gaps = 50/265 (18%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
I N L+ +Y K LR ++ +F+ + ++ SWNT+I+ K +L+ A + F+ P +
Sbjct: 266 ILNNALLDMYVKCKELRIAQSIFNVIVRKDTISWNTMIAGYAKVGNLEIAHNFFEDMPCR 325
Query: 86 DLVTYNSMLCGYINAEGYEADAL---KLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVG 142
DLV++NS++ GY + D L +LF M + E+I D T+ + ++ ++ +
Sbjct: 326 DLVSWNSIIAGYAQ----KGDCLMVQRLFENMVA--ENIWPDFVTIINLVSAAAEIGALH 379
Query: 143 FGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAAC 202
GR +H ++V+ F S+ IDMY KC + AC VF TE+
Sbjct: 380 HGRWIHGWVVRMQMKIDAFLGSAFIDMYWKCGSIKRACMVFREVTEK------------- 426
Query: 203 CREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTF 262
D W T+I+G+ +G + L+LF M E V N+ TF
Sbjct: 427 --------------------DVTVWTTMITGFAFHGYGSKALQLFYEMQEY-VMPNQVTF 465
Query: 263 ASALSACC-------GLRNVKCAKE 280
+ L+AC GLR KE
Sbjct: 466 VAVLTACSHSGFVSQGLRIFNSMKE 490
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%)
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
+IH + + G L +TL+ +Y + M A +FQ D V +N+MI YA G
Sbjct: 148 QIHCHAIITGSFYYGYLQNTLMKIYLENEKMGLAYQVFQQMAAPDAVSFNIMIFGYAKKG 207
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
H +A+ EM+ G+KPD T + +L G ++G+
Sbjct: 208 HNIEALKFLHEMVGLGLKPDEFTMLGLLICCGRLGDAQLGK 248
>gi|90657651|gb|ABD96949.1| hypothetical protein [Cleome spinosa]
Length = 639
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 195/594 (32%), Positives = 308/594 (51%), Gaps = 52/594 (8%)
Query: 79 FDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKL 138
F SP LV YN M+ E + L LF E++ + + D FT+ L
Sbjct: 75 FVQSPC--LVMYNLMIKAVAKDENFRK-VLVLFSELRK--QGLNPDNFTLPPVFKAMGCL 129
Query: 139 LNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAM 198
V G ++H ++VK+ DA +S++ MY
Sbjct: 130 GKVVEGEKVHGYVVKSGFDAC--VCNSVMGMYGAL------------------------- 162
Query: 199 VAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG-ENGVRW 257
G+ME+A K F PE D VSWN LIS YV + E+ + +F RM E+ ++
Sbjct: 163 -------GKMEVAKKVFDEIPE-RDVVSWNVLISSYVGHRKFEDAIAVFRRMRRESNLKA 214
Query: 258 NEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESML 317
+E T S LSAC LRN + +EIH +V L + + ++D+YCKC ++ A ++
Sbjct: 215 DEATVVSTLSACSVLRNQEVGEEIHRYV-DAELEMTTKIGNALLDMYCKCGCVDKARAIF 273
Query: 318 LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFD 377
G +N +SM+ GY+ G+++EAR F+ +++V+WTA+ +GYV+ LFD
Sbjct: 274 DEMGNKNVICWTSMVSGYASNGSLDEARELFERSPVRDIVLWTAMINGYVQFN----LFD 329
Query: 378 LLSEFVTK---EGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLV 434
+ K + + D ILV LL CA AL GK +H YI + +D+ + + LV
Sbjct: 330 EALKLFRKMQIQRLRPDNFILVTLLKGCAQTGALEQGKWLHGYIHENSITLDRVVGTALV 389
Query: 435 DMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAV 494
D+Y+KCG + A +F ERD + +I A +G KA+ F +M E G +PD +
Sbjct: 390 DVYAKCGCVEKALEVFYEMKERDTASWTSVIYGLAVNGMTSKALDFFSQMEEAGFRPDDI 449
Query: 495 TFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKS 554
TF+ +L+A H G VE G +YF+SMT YKI P+++HY+C+IDL RA L++A ++
Sbjct: 450 TFIGVLTACNHGGLVEEGRRYFDSMTKTYKIQPKSEHYSCLIDLLCRAGLLDEAELLLEM 509
Query: 555 IPTEEDAVILG---SFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNW 611
IP E +++ S L+ CR N +++ +L R+E + + + LA+VYA+ W
Sbjct: 510 IPIESSDIVVPLYCSLLSACRNYGNLKMSERVGRRLERVEVKDSSVHTLLASVYASANRW 569
Query: 612 AEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFT 665
++ +R++M+ + +F GCS + V +H F VG SH + + I+SVL T
Sbjct: 570 EDVTTVRRKMKELGIRKFPGCSSIEVNGVLHEFMVGGPSHMEMDDIHSVLGQVT 623
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 167/359 (46%), Gaps = 38/359 (10%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K+G N ++ +Y + ++K+FDE+PER+V SWN +IS+
Sbjct: 139 HGYVVKSGFD--ACVCNSVMGMYGALGKMEVAKKVFDEIPERDVVSWNVLISS------- 189
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
Y+ +E DA+ +F M+ + +++ DE TV STL
Sbjct: 190 ------------------------YVGHRKFE-DAIAVFRRMRR-ESNLKADEATVVSTL 223
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C L N G ++H + V + + ++L+DMY KC C ++A +F+ + N+
Sbjct: 224 SACSVLRNQEVGEEIHRY-VDAELEMTTKIGNALLDMYCKCGCVDKARAIFDEMGNK-NV 281
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
I +MV+ G ++ A + F R P + D V W +I+GYVQ +E LKLF +M
Sbjct: 282 ICWTSMVSGYASNGSLDEARELFERSP-VRDIVLWTAMINGYVQFNLFDEALKLFRKMQI 340
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+R + + L C ++ K +H ++ +N + + V + +VDVY KC +
Sbjct: 341 QRLRPDNFILVTLLKGCAQTGALEQGKWLHGYIHENSITLDRVVGTALVDVYAKCGCVEK 400
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
A + R++ S +S+I G ++ G +A F + E F G + A N
Sbjct: 401 ALEVFYEMKERDTASWTSVIYGLAVNGMTSKALDFFSQMEEAGFRPDDITFIGVLTACN 459
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 80/171 (46%), Gaps = 13/171 (7%)
Query: 396 VILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC--GNMTYAEIIFQNF 453
V LL +C A L +IHA I R+G+Q + ++ +V + G++ YAE +
Sbjct: 20 VDLLQSCESMAHL---TQIHAKIFRVGLQDNMDTLTKIVLFCTDPSRGSIRYAERVLGFV 76
Query: 454 IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
LV+YN+MI A + K ++LF E+ ++G+ PD T + A G V GE
Sbjct: 77 QSPCLVMYNLMIKAVAKDENFRKVLVLFSELRKQGLNPDNFTLPPVFKAMGCLGKVVEGE 136
Query: 514 KYFNSMTADYKISPETDHYAC--MIDLYGRANQLEKAIEFMKSIPTEEDAV 562
K Y + D C ++ +YG ++E A + IP E D V
Sbjct: 137 KVHG-----YVVKSGFDACVCNSVMGMYGALGKMEVAKKVFDEIP-ERDVV 181
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 174/515 (33%), Positives = 273/515 (53%), Gaps = 56/515 (10%)
Query: 170 YSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNT 229
Y + + EA ++F+ E N IS N +V+ + G + A K F + PE N VSW
Sbjct: 4 YFQNKRPREARKLFDKMPE-TNTISWNGLVSGYVQNGMISEARKVFDKMPERN-VVSWTA 61
Query: 230 LISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSW-VLKN 288
+I GYVQ G EE LF RM E RNV SW V+
Sbjct: 62 MIRGYVQEGLIEEAELLFWRMPE--------------------RNVV------SWTVMLG 95
Query: 289 GLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHF 348
GLI + G VD A + + V++ + ++MI G +G + EAR F
Sbjct: 96 GLIED-----GRVD---------EARQLFDMMPVKDVVASTNMIDGLCSEGRLIEAREIF 141
Query: 349 DSLTEKNVVVWTALFSGYVKAQNCEAL--------FDL----LSEFVTKEGVVTDALILV 396
D + ++NVV WT++ SG + F+L L + +EGV ++
Sbjct: 142 DEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRPSFPSVI 201
Query: 397 ILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER 456
+L C A+L G+++H+ ++R +D + S L+ MY KCG++ A+ +F F +
Sbjct: 202 SVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSK 261
Query: 457 DLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYF 516
D+V++N +IA YA HG EKA+ +F +M I PD +TF+ +LSA + G V+ G + F
Sbjct: 262 DIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIF 321
Query: 517 NSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRN 576
SM + Y++ P+T+HYACM+DL GRA +L +A+ ++++P E DA++ G+ L CR ++N
Sbjct: 322 ESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGACRTHKN 381
Query: 577 AELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVY 636
+LA A +KLL+LE NN Y+ L+N+Y+++ W ++ +RK MR + GCSW+
Sbjct: 382 LDLAEIAAKKLLQLEPNNAGPYILLSNLYSSQSRWKDVVELRKTMRAKNLRKSPGCSWIE 441
Query: 637 VEHEIHIFT-VGDVSHPKTNAIYSVLAIFTGELYE 670
V+ ++HIF+ G SHP+ I L L E
Sbjct: 442 VDKKVHIFSGGGSTSHPEHEMILKKLGKLGALLRE 476
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/452 (23%), Positives = 199/452 (44%), Gaps = 92/452 (20%)
Query: 35 YSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSML 94
Y ++ RE+RKLFD+MPE N SWN ++S +++ + +AR +FD P +++V++ +M+
Sbjct: 4 YFQNKRPREARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMI 63
Query: 95 CGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKT 154
GY+ EG +A LF RM E V S + L+ G
Sbjct: 64 RGYVQ-EGLIEEAELLF---------WRMPERNVVSWTVMLGGLIEDGR----------- 102
Query: 155 SNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKT 214
+EA ++F+ + ++++ M+ C EG + A +
Sbjct: 103 ---------------------VDEARQLFDMMPVK-DVVASTNMIDGLCSEGRLIEAREI 140
Query: 215 FWRQPELN------------DAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTF 262
F P+ N D +W+T+I Y + G E L LF M GVR + +
Sbjct: 141 FDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRPSFPSV 200
Query: 263 ASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGV 322
S LS C L ++ +++HS ++++ + +VSS ++ +Y KC
Sbjct: 201 ISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKC--------------- 245
Query: 323 RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF 382
G++ A+R FD + K++V+W ++ +GY + E ++ +
Sbjct: 246 ----------------GDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDM 289
Query: 383 VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL--ISTLVDMYSKC 440
+ + D + + +L AC+ + G EI ++ Q+D K + +VD+ +
Sbjct: 290 FSS-SIAPDEITFIGVLSACSYTGKVKEGLEIFES-MKSKYQVDPKTEHYACMVDLLGRA 347
Query: 441 GNMTYAEIIFQNF-IERDLVLYNVMI-ACYAH 470
G + A + +N +E D +++ ++ AC H
Sbjct: 348 GKLNEAMNLIENMPVEADAIVWGALLGACRTH 379
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 124/272 (45%), Gaps = 49/272 (18%)
Query: 25 TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPH 84
++ +I Y + L+ E+ LF MPERNV SW ++ I+ + +AR LFD P
Sbjct: 56 VVSWTAMIRGYVQEGLIEEAELLFWRMPERNVVSWTVMLGGLIEDGRVDEARQLFDMMPV 115
Query: 85 KDLVTYNSMLCGY---------------------------INAE---------------- 101
KD+V +M+ G I+ E
Sbjct: 116 KDVVASTNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERK 175
Query: 102 GYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGF 161
G+E +AL LF MQ E +R +V S L++C L ++ GRQ+H+ +V++ D +
Sbjct: 176 GFELEALALFSLMQR--EGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIY 233
Query: 162 AVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTF---WRQ 218
S LI MY KC A RVF+ + + +++ N+++A + G E AL+ F +
Sbjct: 234 VSSVLITMYIKCGDLVTAKRVFDRFSSK-DIVMWNSIIAGYAQHGFGEKALEVFHDMFSS 292
Query: 219 PELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
D +++ ++S G +EGL++F M
Sbjct: 293 SIAPDEITFIGVLSACSYTGKVKEGLEIFESM 324
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 38/213 (17%)
Query: 332 IVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK---AQNCEALFDLLSEF------ 382
+ GY EAR+ FD + E N + W L SGYV+ +FD + E
Sbjct: 1 MAGYFQNKRPREARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWT 60
Query: 383 -----VTKEGVVTDALILV-------ILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
+EG++ +A +L ++ L + G+ A L + + +
Sbjct: 61 AMIRGYVQEGLIEEAELLFWRMPERNVVSWTVMLGGLIEDGRVDEARQLFDMMPVKDVVA 120
Query: 431 ST-LVDMYSKCGNMTYAEIIFQNFIERDLV-------------LYNVMIACYAHHGHEEK 476
ST ++D G + A IF +R++V ++ MI Y G E +
Sbjct: 121 STNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELE 180
Query: 477 AILLFEEMLEKGIKPDAVTFVAILSAFRHCGSV 509
A+ LF M +G++P +F +++S CGS+
Sbjct: 181 ALALFSLMQREGVRP---SFPSVISVLSVCGSL 210
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 4/158 (2%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
+++ + +I+ IK DL A+ +FD KD+V +NS++ GY G+ AL++F +M
Sbjct: 231 DIYVSSVLITMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQ-HGFGEKALEVFHDM 289
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFM-VKTSNDASGFAVSSLIDMYSKC 173
S+ I DE T L+ C V G ++ M K D + ++D+ +
Sbjct: 290 FSSS--IAPDEITFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRA 347
Query: 174 RCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMA 211
EA + E E + I A++ AC +++A
Sbjct: 348 GKLNEAMNLIENMPVEADAIVWGALLGACRTHKNLDLA 385
>gi|296090287|emb|CBI40106.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 189/647 (29%), Positives = 313/647 (48%), Gaps = 74/647 (11%)
Query: 23 LTTITTNQLIHIYSKHNLLRESRKLFDEM----PERNVFSWNTIISACIKSHDLKQARSL 78
+ T T + L+H SK LR L + + +VF N +++ K AR +
Sbjct: 1 MITETLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQV 60
Query: 79 FDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKL 138
FD K+LV++++M+ GY A G A+ L+ +M + +E+ S ++ C L
Sbjct: 61 FDEMFEKNLVSWSAMISGYDQA-GEPQMAIDLYSQM-----FLVPNEYVFASVISACASL 114
Query: 139 LNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAM 198
V G+++H+ +K ++ F +SLI MY KC +A VF T E N +S NA
Sbjct: 115 SAVTLGQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTN-TPEPNCVSYNA- 172
Query: 199 VAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWN 258
LI+G+V+N E GL+ F M + G+ +
Sbjct: 173 -------------------------------LITGFVENQQLERGLEFFKLMRQQGLIPD 201
Query: 259 EHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLL 318
F L C N+K E+H +K L S PF+ + I+ +Y + +N
Sbjct: 202 RFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSE---LNL------ 252
Query: 319 LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDL 378
++EA + F + EK+V+ W L + + +
Sbjct: 253 ----------------------IQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRV 290
Query: 379 LSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYS 438
+ V D L ACA A++ GK+IHA+++R + D + + LV+MY+
Sbjct: 291 FKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYA 350
Query: 439 KCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVA 498
KCG + YA IF + +LV +N +IA + +HG E+A+ LFE+M GI+PD+VTF+
Sbjct: 351 KCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIG 410
Query: 499 ILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE 558
+L+A H G V+ G+ YFNSM Y I+P+ +H++C+ID+ GRA +L +A E+M+ P
Sbjct: 411 LLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFW 470
Query: 559 EDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIR 618
D V+L S L+ RL+ + + + LL+L+ + YV L+N+YA++G W + R
Sbjct: 471 NDPVVLVSLLSASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEAR 530
Query: 619 KQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFT 665
K+++G + G S + V + FT+GD +H + I +L +
Sbjct: 531 KRLKGSGLKKEPGHSLIEVNGSVEKFTIGDFTHLRIKEIKGILKTLS 577
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 121/549 (22%), Positives = 205/549 (37%), Gaps = 145/549 (26%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +++K G + +N LI +Y K N ++ +F PE N S+N +I+ +++ L
Sbjct: 124 HSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQL 183
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
++ F + L+ D F L
Sbjct: 184 ERGLEFFKLMRQQGLIP----------------------------------DRFAFMGVL 209
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+C N+ G +LH VK + D++ F + +I MYS+ +EA + F EE ++
Sbjct: 210 GICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFR-LIEEKDV 268
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG- 251
IS N ++AAC D +GL++F M
Sbjct: 269 ISWNTLIAACS--------------------------------HCDDHAKGLRVFKHMTE 296
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
E VR ++ TF SAL+AC GL ++ K+IH+ +++ L + V + +V++Y KC +
Sbjct: 297 ETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIG 356
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
YA + F + N+V W + +G+
Sbjct: 357 YAYDI-------------------------------FSKMVHHNLVSWNTIIAGFGNHGL 385
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM----GVQMDK 427
E +L E + G+ D++ + LL AC + G+ Y M G+ D
Sbjct: 386 GERAVELF-EQMNASGIRPDSVTFIGLLTACNHAGLVDKGQ---LYFNSMEETYGIAPDI 441
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
+ S L+DM + G + AE + F +N
Sbjct: 442 EHFSCLIDMLGRAGRLNEAEEYMRKF-----PFWN------------------------- 471
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISP-ETDHYACMIDLYGRANQLE 546
D V V++LSA R G V +GE+ + K+ P T Y + +LY +
Sbjct: 472 ----DPVVLVSLLSASRLHGDVVIGERLAKWL---LKLQPVTTSPYVLLSNLYASDGMWD 524
Query: 547 KAIEFMKSI 555
E K +
Sbjct: 525 SVAEARKRL 533
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 117/265 (44%), Gaps = 66/265 (24%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
NLK H Q +K L T N +I +YS+ NL++E+ K F + E++V SWNT+I+
Sbjct: 217 NLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIA 276
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
AC D A L++F M + + ++R D
Sbjct: 277 ACSHCDD--------------------------------HAKGLRVFKHM-TEETNVRPD 303
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
+FT TS L C L ++ G+Q+HA +++T ++L++MY+KC C A +F
Sbjct: 304 DFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFS 363
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
NL+S WNT+I+G+ +G E +
Sbjct: 364 KMVHH-NLVS--------------------------------WNTIIAGFGNHGLGERAV 390
Query: 245 KLFVRMGENGVRWNEHTFASALSAC 269
+LF +M +G+R + TF L+AC
Sbjct: 391 ELFEQMNASGIRPDSVTFIGLLTAC 415
>gi|359482518|ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
Length = 1753
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 188/652 (28%), Positives = 332/652 (50%), Gaps = 28/652 (4%)
Query: 29 NQLIHIYSKHNLLRE-SRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP---H 84
N L+ SK +L ++ ++ R+ F ++S + A+ +F+ SP
Sbjct: 876 NDLLQQCSKSHLSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECF 935
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
+L+ +NS+L + A GY +AL+++ M+ + D FT + C + +
Sbjct: 936 SNLLLWNSILRANV-AHGYCEEALEIYCRMRKLG--VSADGFTFPLVIRACALMGSRKLC 992
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE-----GCTEEVNLISKNAMV 199
R +H +V+ + + L+ MY K ++A +VFE C ++S A+
Sbjct: 993 RSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALN 1052
Query: 200 AACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNE 259
C EM + + +P L V+W +L+S + + G E ++LF RM G+
Sbjct: 1053 YDCHGASEMFRMMGSAGLEPNL---VTWTSLLSSHARCGQHVETMELFGRMRMRGIGATA 1109
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLL 319
A LS L K IH +V+K G + FV + ++ +Y K N+N A + L
Sbjct: 1110 EALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLE 1169
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSL--------TEKNVVVWTALFSGYVKAQN 371
+N S +++I Y+ G +EA F L NVV W+A+ G+
Sbjct: 1170 IKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQ 1229
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
E +L + V +++ + +L CA AALH G+EIH +++R + + + +
Sbjct: 1230 GEEALELFRRMQLAK-VKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGN 1288
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
L++MY+K G+ ++F+ +DL+ +N M+A Y HG E AI F++M++ G +P
Sbjct: 1289 GLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEP 1348
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
D VTFVA+LSA H G V G + F+ M ++++ P+ +HYACM+DL GRA L++A +
Sbjct: 1349 DGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKV 1408
Query: 552 MKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNW 611
+KS+P E +A + G+ LN CR+++N E+A E ++ L Y+ L+N+YAA G W
Sbjct: 1409 VKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRW 1468
Query: 612 AEMGRIR--KQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+ ++R + +G+K + G SW+ V+ ++++F+ G+ H + +Y +L
Sbjct: 1469 EDSAKVRISAKTKGLK--KTPGQSWIQVKKKVYMFSAGNTQHAELEEVYRIL 1518
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 116/480 (24%), Positives = 216/480 (45%), Gaps = 58/480 (12%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H ++ G N+L+ +Y K + ++RK+F+ M R+ SWNT++S ++D
Sbjct: 996 HGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDC 1055
Query: 73 KQARSLF----DSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
A +F + +LVT+ S+L + G + ++LF M+ + V
Sbjct: 1056 HGASEMFRMMGSAGLEPNLVTWTSLLSSHARC-GQHVETMELFGRMRMRGIGATAEALAV 1114
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE 188
L++ V L G+ +H ++VK + F +SLI +Y K A R+ +
Sbjct: 1115 --VLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGK-HGNVNAARILFLEIK 1171
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELND-------AVSWNTLISGYVQNGDAE 241
N++S NA++++ G + A F + + ++ VSW+ +I G+ G E
Sbjct: 1172 TKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGE 1231
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E L+LF RM V+ N T AS LS C L + +EIH V+++ + N V +G++
Sbjct: 1232 EALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLI 1291
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSIS--SMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
++Y K + ++ E L+ + + N IS +M+ GY + G E A R FD +
Sbjct: 1292 NMYTK--SGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQM-------- 1341
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
K+G D + V +L AC+ + G+E+ ++
Sbjct: 1342 ------------------------IKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMI 1377
Query: 420 ---RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMI-ACYAHHGHE 474
R+ QM+ + +VD+ + G + A + ++ +E + ++ ++ +C H E
Sbjct: 1378 KEFRVEPQMEH--YACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTE 1435
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 132/257 (51%), Gaps = 21/257 (8%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACI 67
E + H +K G N LI +Y KH + +R LF E+ +N+ SWN +IS+
Sbjct: 1127 EGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYA 1186
Query: 68 KSHDLKQARSLF------DSSP--HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
+A ++F D P ++V++++++ G+ ++G +AL+LF MQ A
Sbjct: 1187 DLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFA-SKGQGEEALELFRRMQLA-- 1243
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
++ + T+ S L++C +L + GR++H +V++ D + + LI+MY+K ++E
Sbjct: 1244 KVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEG 1303
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWR------QPELNDAVSWNTLISG 233
VFE E +LIS N MVA G E A++TF + +P D V++ ++S
Sbjct: 1304 NLVFEKI-ENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEP---DGVTFVAVLSA 1359
Query: 234 YVQNGDAEEGLKLFVRM 250
G EG +LF +M
Sbjct: 1360 CSHAGLVAEGRELFDKM 1376
>gi|242082435|ref|XP_002445986.1| hypothetical protein SORBIDRAFT_07g029130 [Sorghum bicolor]
gi|241942336|gb|EES15481.1| hypothetical protein SORBIDRAFT_07g029130 [Sorghum bicolor]
Length = 567
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 161/485 (33%), Positives = 269/485 (55%), Gaps = 14/485 (2%)
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
A R+F+ +++S N+++A C G+++ A F P+ N A +WN +++G ++ G
Sbjct: 67 ARRLFDEAMPSRDVVSWNSIIAGCLAHGDLDAASAYFAGAPKRNVA-TWNAMLAGLLRLG 125
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
A++ +LF M + V ++ + + V A+E+ + L+S + S
Sbjct: 126 RADDADRLFGEMPKRNVV----SYTTMVDGLARRGEVARAREVFDAMPDRNLVSWAAMIS 181
Query: 299 GIVDVYCKCENMNYAESMLLLKGV--RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNV 356
G V EN + E+ L + + +N + ++MI Y QG++E ARR FD + K+V
Sbjct: 182 GYV------ENGMFVEATKLFEAMPEKNVVACTAMITSYCKQGDVESARRLFDGIRAKDV 235
Query: 357 VVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHA 416
+ W + +GYV + E L + + +EGV D L+ +L AC+ A L GK HA
Sbjct: 236 ISWNTMIAGYVHNGHGEEAMRLHA-VMFREGVKPDHATLIAVLTACSALALLRQGKSTHA 294
Query: 417 YILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
++ ++ + L+ MYSKCGN+ +E++F N +D+V +N +IA YA HG +K
Sbjct: 295 IAIKAMLESGISFSNALMTMYSKCGNVGESELVFINLRTKDIVSWNTIIAAYAQHGKYQK 354
Query: 477 AILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMI 536
I LF EM G+ PD +TF+++LSA H G V+ K F+ M++ Y ISP +HYAC++
Sbjct: 355 VIALFHEMEMTGLIPDDITFLSVLSACGHVGKVDASLKLFDLMSSKYAISPRAEHYACIV 414
Query: 537 DLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKA 596
D+ RA QLEKA ++K +P E + + GS L C+++ N +L A + L++ + +
Sbjct: 415 DILSRAGQLEKASSYIKDMPLEAEKNVWGSLLGACQMHGNVQLGELAAKMLVQSDSESSG 474
Query: 597 RYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNA 656
YV L+N+YAA G W ++ ++R QM+ + G SW + +E+H+F GD SHP+
Sbjct: 475 PYVILSNIYAAAGMWGQVNQVRGQMKERGVKKQPGYSWTEIANEVHMFVGGDASHPEMRK 534
Query: 657 IYSVL 661
I S L
Sbjct: 535 IISEL 539
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 126/466 (27%), Positives = 229/466 (49%), Gaps = 40/466 (8%)
Query: 41 LRESRKLFDE-MPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYIN 99
L +R+LFDE MP R+V SWN+II+ C+ DL A + F +P +++ T+N+ML G +
Sbjct: 64 LPAARRLFDEAMPSRDVVSWNSIIAGCLAHGDLDAASAYFAGAPKRNVATWNAMLAGLLR 123
Query: 100 AEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDAS 159
G DA +LF EM + + + T+ ++ + V R++ M D +
Sbjct: 124 L-GRADDADRLFGEMP------KRNVVSYTTMVDGLARRGEVARAREVFDAM----PDRN 172
Query: 160 GFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQP 219
+ +++I Y + + EA ++FE E+ N+++ AM+ + C++G++E A + F
Sbjct: 173 LVSWAAMISGYVENGMFVEATKLFEAMPEK-NVVACTAMITSYCKQGDVESARRLF-DGI 230
Query: 220 ELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAK 279
D +SWNT+I+GYV NG EE ++L M GV+ + T + L+AC L ++ K
Sbjct: 231 RAKDVISWNTMIAGYVHNGHGEEAMRLHAVMFREGVKPDHATLIAVLTACSALALLRQGK 290
Query: 280 EIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQG 339
H+ +K L S S+ ++ +Y KC N+ +E + + ++ S +++I Y+ G
Sbjct: 291 STHAIAIKAMLESGISFSNALMTMYSKCGNVGESELVFINLRTKDIVSWNTIIAAYAQHG 350
Query: 340 NMEEARRHF-----DSLTEKNVVVWTALFS-GYV-KAQNCEALFDLL-SEFVTKEGVVTD 391
++ F L ++ + L + G+V K LFDL+ S++
Sbjct: 351 KYQKVIALFHEMEMTGLIPDDITFLSVLSACGHVGKVDASLKLFDLMSSKYAISPRAEHY 410
Query: 392 ALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQ 451
A I+ IL A L+ A +YI M ++ +K + +L+ GN+ E+ +
Sbjct: 411 ACIVDILSRAGQLEKA-------SSYIKDMPLEAEKNVWGSLLGACQMHGNVQLGELAAK 463
Query: 452 NFIERD-------LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
++ D ++L N+ YA G + + +M E+G+K
Sbjct: 464 MLVQSDSESSGPYVILSNI----YAAAGMWGQVNQVRGQMKERGVK 505
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 123/240 (51%), Gaps = 38/240 (15%)
Query: 31 LIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTY 90
+I Y ++ + E+ KLF+ MPE+NV + +I++ K D++ AR LFD KD++++
Sbjct: 179 MISGYVENGMFVEATKLFEAMPEKNVVACTAMITSYCKQGDVESARRLFDGIRAKDVISW 238
Query: 91 NSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAF 150
N+M+ GY++ G+ +A++L M E ++ D T+ + L C L + G+ HA
Sbjct: 239 NTMIAGYVH-NGHGEEAMRLHAVMFR--EGVKPDHATLIAVLTACSALALLRQGKSTHAI 295
Query: 151 MVKTSNDASGFAVS-SLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEME 209
+K + SG + S +L+ MYSKC E+ VF +NL +K
Sbjct: 296 AIKAMLE-SGISFSNALMTMYSKCGNVGESELVF------INLRTK-------------- 334
Query: 210 MALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
D VSWNT+I+ Y Q+G ++ + LF M G+ ++ TF S LSAC
Sbjct: 335 -------------DIVSWNTIIAAYAQHGKYQKVIALFHEMEMTGLIPDDITFLSVLSAC 381
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 108/244 (44%), Gaps = 34/244 (13%)
Query: 316 MLLLKG-----VRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA- 369
ML L+G R + I + G++ ARR FD++ ++VV W AL + +A
Sbjct: 1 MLPLRGSASLAARRLLRDNQRISALARAGDVAAARRVFDAMPHRDVVSWNALLTALWRAG 60
Query: 370 -QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAAL-----HPGKEIHAY------ 417
+ A L E + VV+ I+ L L AA P + + +
Sbjct: 61 RHHLPAARRLFDEAMPSRDVVSWNSIIAGCLAHGDLDAASAYFAGAPKRNVATWNAMLAG 120
Query: 418 ILRMGV---------QMDKKLI---STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMI 465
+LR+G +M K+ + +T+VD ++ G + A +F +R+LV + MI
Sbjct: 121 LLRLGRADDADRLFGEMPKRNVVSYTTMVDGLARRGEVARAREVFDAMPDRNLVSWAAMI 180
Query: 466 ACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKI 525
+ Y +G +A LFE M EK + V A+++++ G VE + F+ + A I
Sbjct: 181 SGYVENGMFVEATKLFEAMPEKNV----VACTAMITSYCKQGDVESARRLFDGIRAKDVI 236
Query: 526 SPET 529
S T
Sbjct: 237 SWNT 240
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 60/117 (51%), Gaps = 9/117 (7%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L++ H AIKA L +N L+ +YSK + ES +F + +++ SWNTII+A
Sbjct: 286 LRQGKSTHAIAIKAMLESGISFSNALMTMYSKCGNVGESELVFINLRTKDIVSWNTIIAA 345
Query: 66 CIKSHDLKQARSLFD----SSPHKDLVTYNSML--CGYINAEGYEADALKLFIEMQS 116
+ ++ +LF + D +T+ S+L CG++ G +LKLF M S
Sbjct: 346 YAQHGKYQKVIALFHEMEMTGLIPDDITFLSVLSACGHV---GKVDASLKLFDLMSS 399
>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
Length = 695
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 180/574 (31%), Positives = 296/574 (51%), Gaps = 43/574 (7%)
Query: 135 CVKLLNVGFGRQLHAFM---VKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
C + +V ++L + M + ND F + L+++Y+K A ++F+ T+ N
Sbjct: 32 CFRASDVDQAKRLKSHMHLHLFKPNDT--FIHNRLLNLYAKSGEISHARKLFDEMTQRDN 89
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
S NAM++ + G +E F P D+VS+NT+ISG+ NG L +F+RM
Sbjct: 90 F-SWNAMLSLYAKSGLVEDLRVIFDNMPS-RDSVSYNTVISGFAGNGRGGPALGVFLRMQ 147
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
+ G++ E+T S L+AC L +++ K+IH ++ L N FV + + D+Y +C ++
Sbjct: 148 KEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEID 207
Query: 312 YAESMLLLKGVRNSFSISSMIVGY--------------SLQ------------------- 338
A + +RN + + MI GY +Q
Sbjct: 208 QARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYI 267
Query: 339 --GNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILV 396
G ++EAR+ F + EK+ V WT + G + E L SE + E D +
Sbjct: 268 QAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLL-ENARPDGYTIS 326
Query: 397 ILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER 456
++ +CA A+L+ G+ +H MGV D + S LVDMY KCG A IF R
Sbjct: 327 SVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTR 386
Query: 457 DLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYF 516
++V +N MI YA +G + +A+ L+E MLE+ +KPD+VTFV +LSA H G VE G++YF
Sbjct: 387 NVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYF 446
Query: 517 NSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRN 576
SM+ + + P DHYACM++L+GR+ ++KA++ + S+ E +++I + L+VC + +
Sbjct: 447 CSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGD 506
Query: 577 AELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVY 636
+ A L+ L N Y+ L+N+YAA G W ++ IR M+ +F+ SW+
Sbjct: 507 IKHGEMAARCLIELNPFNAVPYIMLSNMYAARGRWKDVASIRSLMKSKHVKKFSAYSWIE 566
Query: 637 VEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYE 670
+++E+H F D +HP I+ L +L E
Sbjct: 567 IDNEVHKFVADDRTHPDAKIIHVQLNRLIRKLQE 600
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 137/523 (26%), Positives = 235/523 (44%), Gaps = 103/523 (19%)
Query: 25 TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPH 84
T N+L+++Y+K + +RKLFDEM +R+ FSWN ++S KS ++ R +FD+ P
Sbjct: 58 TFIHNRLLNLYAKSGEISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNMPS 117
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
+D V+YN+++ G+ G AL +F+ MQ E ++ E+T S LN C +LL++ G
Sbjct: 118 RDSVSYNTVISGFA-GNGRGGPALGVFLRMQK--EGLKPTEYTHVSVLNACTQLLDLRRG 174
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF--------------------- 183
+Q+H ++ + + F ++L D+Y++C ++A R+F
Sbjct: 175 KQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKN 234
Query: 184 ---EGCTE----------EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTL 230
E C + + + ++ ++++ A + G ++ A K F E D V W +
Sbjct: 235 RQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIRE-KDEVCWTIM 293
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL 290
I G QNG E+ L LF M R + +T +S +S+C L ++ + +H G+
Sbjct: 294 IVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGV 353
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
+ VSS +VD+YCKC A ++ RN S +SMI GY+L G
Sbjct: 354 NDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNG----------- 402
Query: 351 LTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHP 410
Q+ EAL L E + +E + D++ V +L AC +
Sbjct: 403 -------------------QDLEALS--LYENMLEENLKPDSVTFVGVLSACVHAGLVEE 441
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
GKE Y M D+ + D Y+ M+ +
Sbjct: 442 GKE---YFCSMS---DQHGLEPTPDHYA------------------------CMVNLFGR 471
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
GH +KA+ L M + +P+++ + +LS G ++ GE
Sbjct: 472 SGHMDKAVDLISSMSQ---EPNSLIWTTVLSVCVMKGDIKHGE 511
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 128/561 (22%), Positives = 231/561 (41%), Gaps = 104/561 (18%)
Query: 4 LNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
L+L+ H + I L N L +Y++ + ++R+LFD M RNV +WN +I
Sbjct: 169 LDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMI 228
Query: 64 SACIKSHDLKQARSLFD----SSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSAD- 118
S +K+ ++ LF S+ D VT +S+L YI A GY +A K+F E++ D
Sbjct: 229 SGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQA-GYIDEARKVFGEIREKDE 287
Query: 119 ----------------------------EHIRMDEFTVTSTLNLCVKLLNVGFGRQLH-- 148
E+ R D +T++S ++ C KL ++ G+ +H
Sbjct: 288 VCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGK 347
Query: 149 AFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEM 208
AF++ ++D S+L+DMY KC +A +F
Sbjct: 348 AFLMGVNDDL--LVSSALVDMYCKCGVTRDAWTIFSTM---------------------- 383
Query: 209 EMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSA 268
+ + VSWN++I GY NG E L L+ M E ++ + TF LSA
Sbjct: 384 -----------QTRNVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSA 432
Query: 269 CCGLRNVKCAKEIH-SWVLKNGLISNPFVSSGIVDVYCKCENMNYAESML-LLKGVRNSF 326
C V+ KE S ++GL P + +V+++ + +M+ A ++ + NS
Sbjct: 433 CVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQEPNSL 492
Query: 327 SISSMIVGYSLQGNM---EEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV 383
++++ ++G++ E A R L N V + L + Y + + + S
Sbjct: 493 IWTTVLSVCVMKGDIKHGEMAARCLIELNPFNAVPYIMLSNMYAARGRWKDVASIRSLMK 552
Query: 384 TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI----STLVDMYSK 439
+K + + + + E+H ++ D K+I + L+ +
Sbjct: 553 SKH------------VKKFSAYSWIEIDNEVHKFVADDRTHPDAKIIHVQLNRLIRKLQE 600
Query: 440 CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
G ++ +F E D L ++ + H EK L + + KP VT + I
Sbjct: 601 AGFSPNTNLVLHDFGE-DEKLESI-------NYHSEKLALAYGLIK----KPHGVTPIRI 648
Query: 500 LSAFRHCGSVEMGEKYFNSMT 520
+ R C + K+ +++T
Sbjct: 649 IKNIRTCADCHIFMKFVSNIT 669
>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 750
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 195/667 (29%), Positives = 311/667 (46%), Gaps = 73/667 (10%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEM----PERNVFSWN 60
L EA + KAG++++ + L + L R L + M +V N
Sbjct: 61 KLNEAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLHNRMRMGIENPSVLLQN 120
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM-QSADE 119
++ + L+ A LFD + V+ +M+ Y +G A+ LF M +S D
Sbjct: 121 CVLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAE-QGLLDKAVGLFSRMLESGD- 178
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
+ T+ L V + GRQ+HA +++ ++ + +++MY KC A
Sbjct: 179 --KPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGA 236
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
RVF+ +MA+K V+W L+ GY Q G
Sbjct: 237 KRVFD------------------------QMAVKK---------PVAWTGLMVGYTQAGR 263
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
A + LKLFV + GV W+ F+ L AC L ++ K+IH+ V K GL V +
Sbjct: 264 ARDALKLFVDLITEGVEWDSFVFSVVLKACASLEELRFGKQIHACVAKLGLECEVSVGTP 323
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
+VD Y KC + E A R F + E N V W
Sbjct: 324 LVDFYIKC-------------------------------SSFESACRAFQEIREPNDVSW 352
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
+A+ SGY + E +K VV ++ + AC++ A + G ++HA +
Sbjct: 353 SAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAI 412
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
+ + + S L+ MYSKCG + A +F++ D+V + I+ +A++G+ +A+
Sbjct: 413 KRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASEALR 472
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
LFE+M+ G+KP++VTF+A+L+A H G VE G+ Y ++M Y ++P DHY CMID+Y
Sbjct: 473 LFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIY 532
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYV 599
R+ L++A+ FMK++P E DA+ FL+ C ++N EL A E+L +L+ + A YV
Sbjct: 533 ARSGLLDEALRFMKNMPFEPDAMSWKCFLSGCWTHKNLELGKIAGEELRQLDPEDTAGYV 592
Query: 600 QLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYS 659
N+Y G W E + K M + CSW+ + +IH F VGD HP++ IY
Sbjct: 593 LPFNLYTWAGKWEEAAEVMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQSQEIYE 652
Query: 660 VLAIFTG 666
L F G
Sbjct: 653 KLKEFDG 659
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 180/610 (29%), Positives = 306/610 (50%), Gaps = 73/610 (11%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
+++ +++++ +K L A+ +FD P KD+V +NS++ GY+ +G +++++F+EM
Sbjct: 179 HLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQ-KGLFWESIQMFLEM 237
Query: 115 QSADEHIRMDEFTVTSTLNLCVK--LLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
+R T+ + L C + L VG + + ND F ++SL+DMYS
Sbjct: 238 IGGG--LRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDV--FVLTSLVDMYSN 293
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
A VF+ + C R +SWN +IS
Sbjct: 294 LGDTGSAALVFD---------------SMCSRS------------------LISWNAMIS 320
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
GYVQNG E LF R+ ++G ++ T S + C +++ + +HS +++ L S
Sbjct: 321 GYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELES 380
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
+ +S+ IVD+Y KC G +++A F +
Sbjct: 381 HLVLSTAIVDMYSKC-------------------------------GAIKQATIVFGRMG 409
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
+KNV+ WTA+ G + E L + + +E V +++ LV L+ CA +L G+
Sbjct: 410 KKNVITWTAMLVGLSQNGYAEDALKLFCQ-MQEEKVAANSVTLVSLVHCCAHLGSLTKGR 468
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQN-FIERDLVLYNVMIACYAHH 471
+HA+ +R G D + S L+DMY+KCG + AE +F N F +D++L N MI Y H
Sbjct: 469 TVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMH 528
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH 531
GH A+ ++ M+E+ +KP+ TFV++L+A H G VE G+ F+SM D+ + P+ H
Sbjct: 529 GHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKH 588
Query: 532 YACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLE 591
YAC++DL+ RA +LE+A E +K +P + +L + L+ CR ++N + + ++L+ L+
Sbjct: 589 YACLVDLHSRAGRLEEADELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLISLD 648
Query: 592 GNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSH 651
N YV L+N+YA W + IR MR + G S + V ++++ F D SH
Sbjct: 649 YLNSGIYVMLSNIYAEARKWESVNYIRGLMRMQGMKKIPGYSLIEVGNKVYTFFASDDSH 708
Query: 652 PKTNAIYSVL 661
P IY +L
Sbjct: 709 PSWADIYQLL 718
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 148/336 (44%), Gaps = 33/336 (9%)
Query: 213 KTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGL 272
+ + Q L + N +I+G+++N E +LF MG + N +T AL AC L
Sbjct: 99 RNVFDQCSLPETAVCNAMIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDL 158
Query: 273 RNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMI 332
+ + EI ++ G + +V S +V+ K
Sbjct: 159 LDDEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVK-------------------------- 192
Query: 333 VGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDA 392
+G + +A++ FD + EK+VV W ++ GYV+ + E + G+
Sbjct: 193 -----RGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGG-GLRPSP 246
Query: 393 LILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQN 452
+ + LL AC G H+Y+L +G+ D ++++LVDMYS G+ A ++F +
Sbjct: 247 VTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDS 306
Query: 453 FIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMG 512
R L+ +N MI+ Y +G ++ LF +++ G D+ T V+++ +E G
Sbjct: 307 MCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENG 366
Query: 513 EKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
+ +S ++ ++D+Y + +++A
Sbjct: 367 -RILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQA 401
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 101/475 (21%), Positives = 186/475 (39%), Gaps = 114/475 (24%)
Query: 6 LKEALIC-HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
LK+ +C H + G+ L+ +YS + +FD M R++ SWN +IS
Sbjct: 261 LKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMIS 320
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
+++ + ++ +LF + LV S G+ D
Sbjct: 321 GYVQNGMIPESYALF-----RRLVQSGS---GF--------------------------D 346
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
T+ S + C + ++ GR LH+ +++ ++ ++++DMYSKC ++A VF
Sbjct: 347 SGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVF- 405
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
G + N+I+ AM+ + G E AL
Sbjct: 406 GRMGKKNVITWTAMLVGLSQNGYAEDAL-------------------------------- 433
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
KLF +M E V N T S + C L ++ + +H+ +++G + ++S ++D+Y
Sbjct: 434 KLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMY 493
Query: 305 CKCENMNYAESMLLLKGVRNSFSI------SSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
KC ++ AE + N F + +SMI+GY + G+ A + + E
Sbjct: 494 AKCGKIHSAEKLF-----NNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIE----- 543
Query: 359 WTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI-HAY 417
E + + V LL AC+ + GK + H+
Sbjct: 544 ---------------------------ERLKPNQTTFVSLLTACSHSGLVEEGKALFHSM 576
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQN--FIERDLVLYNVMIACYAH 470
V+ K + LVD++S+ G + A+ + + F VL ++ C H
Sbjct: 577 ERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQPSTDVLEALLSGCRTH 631
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 105/236 (44%), Gaps = 36/236 (15%)
Query: 279 KEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQ 338
K IH+ ++KN + + F+++ ++ VY + +A ++ + + ++MI G+
Sbjct: 64 KSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRN 123
Query: 339 GNMEEARRHFDSLTEKNVVV--WTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILV 396
E R F + ++ + +T +F+ +A DLL + V E
Sbjct: 124 QQHMEVPRLFRMMGSCDIEINSYTCMFA-------LKACTDLLDDEVGME---------- 166
Query: 397 ILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER 456
++AA+ G +H Y+ S++V+ K G + A+ +F E+
Sbjct: 167 ------IIRAAVRRGFHLHLYVG-----------SSMVNFLVKRGYLADAQKVFDGMPEK 209
Query: 457 DLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMG 512
D+V +N +I Y G ++I +F EM+ G++P VT +L A G ++G
Sbjct: 210 DVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVG 265
>gi|359495784|ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 616
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 209/670 (31%), Positives = 322/670 (48%), Gaps = 75/670 (11%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
MR L L H Q I GLT T+T +LI
Sbjct: 1 MRGLKL-----LHAQIILHGLTNETLTLGKLISF-------------------------- 29
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
A + DL+ A+ +FD P + YNS++ GY N++ DA+ LF M +
Sbjct: 30 ---CAVDDAGDLQYAQRMFDQIPQPNKFMYNSLIRGYSNSDD-PIDAVLLFRRMICSG-- 83
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
+ +EFT+ L C +H +K + F ++LI +Y C A
Sbjct: 84 LSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLIHCAR 143
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
++F+ T+ KT VSWN++I GY G+
Sbjct: 144 KLFDDITD------------------------KTL---------VSWNSMIGGYAHMGNW 170
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
+E LF +M E G+ + TF + LS C R++ + +H + G+ + V + +
Sbjct: 171 KEAFLLFRKMREWGMEPDGFTFVNLLSVCSQSRDLDLGRYVHFCIEITGVKIDIIVRNAL 230
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
VD+Y KC N++ A+++ +N S +SMI Y+ G++E AR+ FD + KNVV W
Sbjct: 231 VDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWN 290
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
++ S Y++ DL ++ VV D LV +L AC+ L GK+IH YIL
Sbjct: 291 SMISCYLREGQYREALDLFNKMRNSR-VVPDEATLVSILAACSQLGDLVMGKKIHNYILS 349
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
L ++L+DMY+KCG + A IF ++LV +NV+I A HG +AI L
Sbjct: 350 NKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKL 409
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
FEEM G PD +T +LSA H G V+MG YF+ M Y++ E +HYACM+DL G
Sbjct: 410 FEEMQADGTLPDEITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVPREIEHYACMVDLLG 469
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQ 600
R L +AIE + +P + D V+ G+ L CR++ N E+ + ++LL LE ++ YV
Sbjct: 470 RGGLLGEAIELIGRMPMKPDVVVWGALLGACRIHGNVEIGKQILKQLLELEPHSGGLYVL 529
Query: 601 LANVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
++N+Y W ++ +IRK M RG+K R S + ++ I+ F V D H +++IY
Sbjct: 530 ISNIYWEAQRWEDVKKIRKLMIDRGIKKGR--AISSIEIDGCIYEFMVDDKRHKISSSIY 587
Query: 659 SVLAIFTGEL 668
++L T L
Sbjct: 588 AMLDQLTDHL 597
>gi|297846216|ref|XP_002890989.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336831|gb|EFH67248.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 792
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 224/693 (32%), Positives = 345/693 (49%), Gaps = 76/693 (10%)
Query: 25 TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPH 84
I L+ Y+K L E+R LF+ MPERN+ + N +++ +K L +A +LF P
Sbjct: 107 VIYCTSLLTKYAKAGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRLNEAWTLFREMP- 165
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVG-F 143
K++V++ ML + +G DA++LF EM E V S L L+ G
Sbjct: 166 KNVVSWTVMLTALCD-DGRSDDAVELFDEMP---------ERNVVSWNTLVTGLIRNGET 215
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
+ F S DA + +++I Y + EEA +FE +E+ N+++ +MV C
Sbjct: 216 EKAKQVFDAMPSRDAVSW--NAMIKGYIENGGMEEAKLLFENMSEK-NVVTWTSMVYGYC 272
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGEN--GVRWNEHT 261
R G++ A + F PE N VSW +ISG+ N E L LF+ M ++ + N T
Sbjct: 273 RYGDVHEAYRLFCEMPERN-VVSWTAMISGFAWNEFYREALMLFLEMKKDVDAISPNGET 331
Query: 262 FASALSACCGLRN--VKCAKEIHSWVLKNGLIS---NPFVSSGIVDVYCKCENMNYAESM 316
S AC GL + +++H+ V+ NG S + ++ +V +Y + A+S+
Sbjct: 332 LISLAYACGGLGVGFRRLGEQLHAQVISNGWESVDHDGRLAKSLVHMYASFGLIASAQSL 391
Query: 317 LLLKGVRNSFSISS---MIVGYSLQGNMEEAR---RHFDSLTEKNVVVWTALFSGYVKAQ 370
L SF + S +I Y G+ E A R +SL +K V WT++ GY+ A
Sbjct: 392 L-----NESFDLQSCNIIISAYLKNGDFERAETLFRRVESLHDK--VSWTSMIDGYLDAG 444
Query: 371 NCEALFDLLSEFVTKEGVVTDALI--LV----------------------------ILLG 400
+ FDL + K+GV +I LV +LL
Sbjct: 445 DVSRAFDLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLS 504
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLI--STLVDMYSKCGNMTYAEIIFQNFIERDL 458
+ + L GK +H I + D LI ++LV MY+KCG + A IF + +D+
Sbjct: 505 SAGATSNLDQGKHLHCVIAKTTACYDPDLILQNSLVSMYAKCGAIDDAYEIFSKMVRKDI 564
Query: 459 VLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNS 518
V +N +I +HHG +KA+ LF+EML+ G+KP++VTF+ +LSA H G + G + F +
Sbjct: 565 VSWNSVIIGLSHHGLADKALKLFKEMLDSGMKPNSVTFLGVLSACSHSGLITKGLELFKA 624
Query: 519 MTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLN-RNA 577
M Y I P +HY MIDL GRA +L++A EF+ ++P D + G+ L +C LN R+
Sbjct: 625 MKETYSIQPGVEHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDR 684
Query: 578 ELAGEAEE---KLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKG-NRFAGCS 633
+ AG AE +LL L+ N +V L N+YA G +RK+M G+KG + GCS
Sbjct: 685 DAAGIAERAAMRLLELDPVNAPGHVALCNMYAGLGRHEMEKEMRKEM-GIKGVKKTPGCS 743
Query: 634 WVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTG 666
WV V ++F GD S + + VL+IF G
Sbjct: 744 WVVVNGRANVFLSGDKSASEAGQM--VLSIFCG 774
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 99/226 (43%), Gaps = 14/226 (6%)
Query: 278 AKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSL 337
A+ + + + G IS + ++ Y K ++ A + + RN + ++M+ GY
Sbjct: 91 ARHLLDKIPQRGSISRVIYCTSLLTKYAKAGYLDEARVLFEVMPERNIVTCNAMLTGYVK 150
Query: 338 QGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVI 397
+ EA F + KNVV WT + + + +L E + V + L+ +
Sbjct: 151 CRRLNEAWTLFREMP-KNVVSWTVMLTALCDDGRSDDAVELFDEMPERNVVSWNTLVTGL 209
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD 457
+ +A + A R V + ++ Y + G M A+++F+N E++
Sbjct: 210 IRNGETEKAK----QVFDAMPSRDAVSWN-----AMIKGYIENGGMEEAKLLFENMSEKN 260
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAF 503
+V + M+ Y +G +A LF EM E+ + V++ A++S F
Sbjct: 261 VVTWTSMVYGYCRYGDVHEAYRLFCEMPERNV----VSWTAMISGF 302
>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 823
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 200/675 (29%), Positives = 323/675 (47%), Gaps = 80/675 (11%)
Query: 7 KEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS-A 65
+EAL+ + +++GL T H L R S + F W T +S
Sbjct: 128 QEALVLLGEMLESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGF-WGTDVSVG 186
Query: 66 CI------KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
C ++ DL AR +F+ + +V + M+ Y+ G A++LF+ M ++
Sbjct: 187 CALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQG-GCAGKAVELFLGM--LED 243
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
D +T++S ++ C + + G G+QLH+ +++ + L+DMY+K +
Sbjct: 244 GFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQ----- 298
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
E ME A K F R P N +SW LISGYVQ G
Sbjct: 299 ------------------------MEQSMECARKVFKRMPTHN-VMSWTALISGYVQCGG 333
Query: 240 AEE-GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
E ++L M + N T++S L AC L + ++IH+ V+K + + V +
Sbjct: 334 QENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDSGRQIHARVMKTSIGNVNVVGN 393
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
+V +Y AES G MEEAR+ FD L E+N++
Sbjct: 394 ALVSMY--------AES-----------------------GCMEEARKAFDQLYERNLLS 422
Query: 359 WTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
T+ G N S + V LL A A G+++HA
Sbjct: 423 -TSSDIGETGRSNAS-----WSSQIESMDVGVSTFTFASLLSAAATVGLPTKGQQLHALS 476
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKA 477
++ G + DK + ++LV MYS+CG + A F + +++ + +I+ A HGH E+A
Sbjct: 477 IKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERA 536
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID 537
+ LF +M+ G+KP+ VT++A+LSA H G V+ G++YF SM D+++ P +HYACM+D
Sbjct: 537 LSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYACMVD 596
Query: 538 LYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKAR 597
L R+ +++A+EF+ +P + DA++ + L CR N E+ A ++ LE + A
Sbjct: 597 LLARSGLVQEALEFINEMPCKADALVWKTLLGACRTYENIEIGEIAARHVIDLEPQDPAP 656
Query: 598 YVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
YV L+N+YA G W E+ RIR MR ++ G SW++V + IH F GD SHP+ I
Sbjct: 657 YVLLSNLYAHGGLWDEVARIRSLMRHRNLSKETGLSWMHVGNTIHEFRAGDTSHPRAQEI 716
Query: 658 YSVLAIFTGELYEIA 672
Y+ LA+ E+ +I
Sbjct: 717 YAKLAVLIREIKDIG 731
>gi|225428117|ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial [Vitis vinifera]
Length = 681
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 197/695 (28%), Positives = 338/695 (48%), Gaps = 111/695 (15%)
Query: 1 MRSLNLKEALICHV---QAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVF 57
+++L+ L C V Q K ++L T N+ I ++ + E+R LFD MP+RN+
Sbjct: 40 LKNLSPPPHLHCFVSTLQQPKNSVSLDLYTPNKRISHLIRNGRINEARALFDAMPQRNIV 99
Query: 58 SWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEG-YEADALKLFIEMQS 116
+WN++I+ ++ ++ +AR LFD P +D+V++N M+ GY++ +G + + LF EM
Sbjct: 100 TWNSMITGYVRRREMAKARKLFDEMPDRDVVSWNLMISGYVSCQGRWVEEGRHLFDEMPE 159
Query: 117 ADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCY 176
D CV + +++I Y++
Sbjct: 160 RD----------------CV-------------------------SWNTMISGYTRSGRM 178
Query: 177 EEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAV----------- 225
+EA ++F+ +E N++S NAMV + G++E A++ F R PE + A
Sbjct: 179 DEALQLFD-SMQERNVVSWNAMVTGFLQNGDVERAIEFFMRMPERDSASLSALVAGLIQN 237
Query: 226 -------------------------SWNTLISGYVQNGDAEEGLKLFV------------ 248
++N L++GY QNG ++ +LF
Sbjct: 238 GELDEAKRILLTSRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYDGGQKDG 297
Query: 249 -RMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
R N V WN S + R++ A+ + + + IS + SG Y +
Sbjct: 298 GRFERNVVSWN-----SMIMCYVKARDIFSARVLFDQMKERDTISWNTMISG----YVRM 348
Query: 308 ENMNYAESMLLLKGVRN--SFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
+M E+ +L + + N + + +SMI G++ +GN+E AR F ++ +KN+V W ++ +G
Sbjct: 349 SDME--EAWMLFQEMPNPDTLTWNSMISGFAQKGNLELARALFATIPQKNLVSWNSMIAG 406
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
Y + + +L + + +G D L +L C+ AALH G +IH I + V
Sbjct: 407 YENNGDYKGATELYRQMLL-QGEKPDRHTLSSVLSVCSGFAALHLGMQIHQQITKT-VIP 464
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
D + ++L+ MYS+CG + A IF ++++++ +N MI YA HG A+ LFE M
Sbjct: 465 DIPINNSLITMYSRCGAIVEARTIFDEVKLQKEVISWNAMIGGYAFHGFAADALELFELM 524
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
++P +TF+++L+A H G V+ G +F SM ++ I P +H+A ++D+ GR Q
Sbjct: 525 KRLKVRPTYITFISVLNACAHAGFVKEGRMHFKSMACEFGIEPRIEHFASLVDIVGRHGQ 584
Query: 545 LEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANV 604
LE+A++ + S+P E D + G+ L CR++ N ELA A E L++LE + A YV L N+
Sbjct: 585 LEEAMDLINSMPFEPDKAVWGALLGACRVHNNVELARVAAEALMKLEPESSAPYVLLHNM 644
Query: 605 YAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEH 639
YA G W +R M + G SWV H
Sbjct: 645 YADVGQWDNATEMRMMMERNNIRKQPGYSWVDSSH 679
>gi|357469751|ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506215|gb|AES87357.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1026
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 161/480 (33%), Positives = 262/480 (54%), Gaps = 2/480 (0%)
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
E ++ NA + GE+ +A F + + D V+WN++I+G V+ G A E +K++
Sbjct: 190 ECDIFVHNASITMLLSCGELSVAYDVF-NKSRVRDLVTWNSMITGCVKRGLAIEAIKIYK 248
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
M VR NE T +S+C ++++ KE H ++ ++GL +++ ++D+Y KC
Sbjct: 249 EMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCG 308
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
+ A + + S ++M++GY+ G ++ AR + EK+VV W A+ SG V+
Sbjct: 309 ELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQ 368
Query: 369 AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK 428
A+ + L E + + D + +V L AC+ AL G IH YI R + +D
Sbjct: 369 AKQGKEALALFHEMQIRT-IEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVA 427
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
L + LVDMY+KCGN+ A +F+ +R+ + + +I A HG+ + A+ F +M+ G
Sbjct: 428 LGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIG 487
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
I PD +TF+ +LSA H G VE G KYF+ M++ + +SP+ HY+CM+DL GRA LE+A
Sbjct: 488 IVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEA 547
Query: 549 IEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAE 608
E +K++P DA +LG+ CR+ N ++ KLL ++ + YV LA++Y+
Sbjct: 548 EELVKNMPMAADAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEA 607
Query: 609 GNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
W E RK M + GCS V + +H F V DVSHP++ IY L T +L
Sbjct: 608 KMWKEARSARKLMNDKGVEKTPGCSLVEINGIVHEFVVRDVSHPQSEWIYECLVTLTKQL 667
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 190/402 (47%), Gaps = 38/402 (9%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
E ++F N I+ + +L A +F+ S +DLVT+NSM+ G + G +A+K++
Sbjct: 190 ECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVK-RGLAIEAIKIYK 248
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
EM++ E +R +E T+ ++ C ++ ++ G++ H ++ + + + ++L+DMY K
Sbjct: 249 EMEA--EKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVK 306
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C A +F+ ++ L+S MV R G +++A + ++ PE V WN +IS
Sbjct: 307 CGELLTARVLFDNMAQK-TLVSWTTMVLGYARFGFLDVAREILYKIPE-KSVVPWNAIIS 364
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
G VQ +E L LF M + ++ T + LSAC L + IH ++ ++ L
Sbjct: 365 GCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSI 424
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
+ + + +VD+Y KC N+ A + RN + +++I G +L GN ++A +F +
Sbjct: 425 DVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMI 484
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
G+V D + + +L AC + G+
Sbjct: 485 HI--------------------------------GIVPDEITFLGVLSACCHGGLVEEGR 512
Query: 413 EIHAYI-LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF 453
+ + + + V K S +VD+ + G++ AE + +N
Sbjct: 513 KYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNM 554
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 110/469 (23%), Positives = 188/469 (40%), Gaps = 99/469 (21%)
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
H + E + S L C L+ + +Q+ A MV T +GFA S L+
Sbjct: 52 HSFVRENPLLSILERCKSLVQL---KQIQAQMVSTGLIENGFAASRLVAF---------- 98
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
A E++ + +R ELN SWN I GYV++GD
Sbjct: 99 --------------------CALSESKELDYCTRILYRIKELN-VFSWNAAIRGYVESGD 137
Query: 240 AEEGLKLFVRMGENG-VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
E G L+ RM G ++ + HT+ L CCG + + VLK G + FV +
Sbjct: 138 IEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLGVLGHVLKFGFECDIFVHN 197
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
+ + C G + A F+ +++V
Sbjct: 198 ASITMLLSC-------------------------------GELSVAYDVFNKSRVRDLVT 226
Query: 359 WTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
W ++ +G VK + E + E V + + ++ ++ +C+ L+ GKE H YI
Sbjct: 227 WNSMITGCVKRGLAIEAIKIYKE-MEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYI 285
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG------ 472
G++ L + L+DMY KCG + A ++F N ++ LV + M+ YA G
Sbjct: 286 KEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAR 345
Query: 473 -------------------------HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCG 507
++A+ LF EM + I+PD VT V LSA G
Sbjct: 346 EILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLG 405
Query: 508 SVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIP 556
++++G + + +K+S + ++D+Y + + +A++ + IP
Sbjct: 406 ALDVG-IWIHHYIERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIP 453
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 127/270 (47%), Gaps = 38/270 (14%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
++ LNL + C+++ + GL T TN L+ +Y K L +R LFD M ++ + SW
Sbjct: 272 VQDLNLGKEFHCYIK--EHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWT 329
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
T++ + L AR + P K +V +N+++ G + A+ + +AL LF EMQ
Sbjct: 330 TMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGK-EALALFHEMQI--RT 386
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
I D+ T+ + L+ C +L + G +H ++ + ++L+DMY+KC
Sbjct: 387 IEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTALVDMYAKC------- 439
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
G + AL+ F P+ N ++W +I G +G+A
Sbjct: 440 -------------------------GNIARALQVFEEIPQRN-CLTWTAVICGLALHGNA 473
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACC 270
++ L F +M G+ +E TF LSACC
Sbjct: 474 QDALSYFSKMIHIGIVPDEITFLGVLSACC 503
>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 684
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 177/604 (29%), Positives = 301/604 (49%), Gaps = 43/604 (7%)
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I C+ S DLK+A LFD P DL T+ ++ G+ G+ A+ ++ + S ++
Sbjct: 17 LIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQ-HGFPKKAIDIYSTLLS--RNV 73
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
R D+F + S C ++ +++H ++ + ++LIDM+ KC+ A
Sbjct: 74 RPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARC 133
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
VF+ +M +K D VSW ++ YV G
Sbjct: 134 VFD------------------------DMVVK---------DVVSWTSMTYCYVNCGMCR 160
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
+G+ LF MG NG+R N T +S L AC +K +E+H ++L+N + N +VSS +V
Sbjct: 161 QGILLFREMGLNGIRANSLTVSSILPACADY--IKLGREVHGFILRNEMEGNVYVSSALV 218
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK----NVV 357
++Y + A + R+ S + M+ Y L E F + ++ N
Sbjct: 219 NMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYERGLGLFHQMRKEGIKLNQA 278
Query: 358 VWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
W A SG ++ E +L + + G+ + + +V L C +L GKEIH Y
Sbjct: 279 SWNAAISGCMQNGQHELALGILCK-MQDSGIKPNRITIVSALPGCTNLESLRGGKEIHGY 337
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
+ R D + + LV +Y+KCG++ + +F +D+V +N MI + HG ++
Sbjct: 338 VFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPRKDVVAWNTMIMANSMHGKGGES 397
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID 537
++LF +ML+ G++P++VTF+ +LS H + G FNSM++++ I+P+ DHY+CM+D
Sbjct: 398 LILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGLLVFNSMSSEHSITPDADHYSCMVD 457
Query: 538 LYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKAR 597
+ RA +LE+A +F++ +P E A G+ L CR+ +N EL A +L +E +N
Sbjct: 458 VLSRAGRLEEAYDFIRKMPIEPTAAAWGALLGACRVYKNVELGTLAASQLFEIEPDNAGN 517
Query: 598 YVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
YV L+N+ W E IRK MR + G SWV V+++++ F GD S+ + + I
Sbjct: 518 YVLLSNILVTAKKWVEASEIRKMMRDKGLAKTPGRSWVQVKNKVYSFVTGDKSNEQKDMI 577
Query: 658 YSVL 661
Y L
Sbjct: 578 YRFL 581
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 177/388 (45%), Gaps = 46/388 (11%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H AI+ G + N LI ++ K + +R +FD+M ++V SW ++
Sbjct: 100 HDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFDDMVVKDVVSWTSM---------- 149
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
TY + CG + LF EM IR + TV+S L
Sbjct: 150 ----------------TYCYVNCGMCR------QGILLFREM--GLNGIRANSLTVSSIL 185
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C + + GR++H F+++ + + + S+L++MY+ ++A VF+ ++
Sbjct: 186 PACADYIKL--GREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHR-DI 242
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQP----ELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
+S N M+ A E E L F + +LN A SWN ISG +QNG E L +
Sbjct: 243 VSWNVMLTAYFLNKEYERGLGLFHQMRKEGIKLNQA-SWNAAISGCMQNGQHELALGILC 301
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
+M ++G++ N T SAL C L +++ KEIH +V ++ I + +++ +V +Y KC
Sbjct: 302 KMQDSGIKPNRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCG 361
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEA----RRHFDSLTEKNVVVWTALFS 364
++ + + ++ + ++MI+ S+ G E+ + DS E N V + + S
Sbjct: 362 DLELSRHVFNTMPRKDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLS 421
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDA 392
G +Q + + + ++ + DA
Sbjct: 422 GCSHSQLADEGLLVFNSMSSEHSITPDA 449
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 96/194 (49%), Gaps = 14/194 (7%)
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
N+ +S+ L+K NS G+++ A FD + E ++ WT L SG+ +
Sbjct: 8 NLQPCQSIKLIKTCLNS-------------GDLKRALYLFDKIPEPDLRTWTILISGHTQ 54
Query: 369 AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK 428
+ D+ S +++ V D +L+ + ACA L K+IH ++ G D
Sbjct: 55 HGFPKKAIDIYSTLLSRN-VRPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLV 113
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
L + L+DM+ KC + A +F + + +D+V + M CY + G + ILLF EM G
Sbjct: 114 LGNALIDMFGKCKFVNGARCVFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNG 173
Query: 489 IKPDAVTFVAILSA 502
I+ +++T +IL A
Sbjct: 174 IRANSLTVSSILPA 187
Score = 45.4 bits (106), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
KLI T ++ G++ A +F E DL + ++I+ + HG +KAI ++ +L +
Sbjct: 16 KLIKTCLN----SGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSR 71
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGR 541
++PD +++ A G + + +K + + + + +ID++G+
Sbjct: 72 NVRPDKFVLLSVAKACAASGDLVVAKKIHDD-AIQFGFNKDLVLGNALIDMFGK 124
>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1736
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 203/644 (31%), Positives = 313/644 (48%), Gaps = 81/644 (12%)
Query: 31 LIHIYSKHNLLRESRKLFDE---------MPERNVFSWNTIISACIKSHDLKQARSLFDS 81
L+ +S+ ++L E R+ E + + V N +++ KS + A S+F+
Sbjct: 388 LLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFEL 447
Query: 82 SPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNV 141
KD V++NS++ G E E DA + F M+ FT+ STL+ C L +
Sbjct: 448 MVEKDSVSWNSLISGLDQNECSE-DAAESFHRMRRTGS--MPSNFTLISTLSSCASLGWI 504
Query: 142 GFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAA 201
G Q+H +K D ++L+ +Y++ C+ E
Sbjct: 505 MLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTEC---------------------- 542
Query: 202 CCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE--EGLKLFVRMGENGVRWNE 259
LK F PE D VSWN++I G + + +A + +K F++M G +
Sbjct: 543 ----------LKVFSLMPEY-DQVSWNSVI-GALSDSEASVSQAVKYFLQMMRGGWGLSR 590
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLL 319
TF + LSA L + + +IH+ VLK L + + + ++ Y KC MN E +
Sbjct: 591 VTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIF-- 648
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLL 379
M E R + V W ++ SGY+ + DL+
Sbjct: 649 -------------------ARMSETR---------DEVSWNSMISGYIHNELLHKAMDLV 680
Query: 380 SEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
F+ ++G D+ +L ACA A L G E+HA +R ++ D + S LVDMYSK
Sbjct: 681 -WFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSK 739
Query: 440 CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
CG + YA F+ R++ +N MI+ YA HGH EKA+ LF M+ G PD VTFV +
Sbjct: 740 CGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGV 799
Query: 500 LSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE 559
LSA H G VE G ++F SM+ Y++SP +H++CM+DL GRA +L++ +F+ S+P +
Sbjct: 800 LSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKP 859
Query: 560 DAVILGSFLNV-CRLN-RNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRI 617
+ +I + L CR N RN EL A E LL LE N YV LAN+YA+ W ++ +
Sbjct: 860 NVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKA 919
Query: 618 RKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
R M+ + AGCSWV ++ +H+F GD HP+ + IY L
Sbjct: 920 RTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKL 963
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 128/522 (24%), Positives = 221/522 (42%), Gaps = 114/522 (21%)
Query: 7 KEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISAC 66
+EA H+Q+IK G +N LI+IY + L ++KLFDEM RN+ +W +IS
Sbjct: 88 EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGY 147
Query: 67 IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEF 126
++ +A + F +D+V G+I + +
Sbjct: 148 TQNGKPDEACARF-----RDMVR-----AGFIP------------------------NHY 173
Query: 127 TVTSTLNLCVKLLNVG--FGRQLHAFMVKTSNDASGFAVSSLIDMYSKC-RCYEEACRVF 183
S L C + G G Q+H + KT + + LI MY C +A VF
Sbjct: 174 AFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVF 233
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
+G + +++SWN++IS Y + GDA
Sbjct: 234 DGIG---------------------------------IRNSISWNSIISVYSRRGDAVSA 260
Query: 244 LKLFVRMGENGV----RWNEHTFASALSACCGLRNVKCA--KEIHSWVLKNGLISNPFVS 297
LF M + G+ + NE+TF S ++ C + +++ + V K+G + + +VS
Sbjct: 261 YDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQDLYVS 320
Query: 298 SGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVV 357
S +V + + + A+++ GVRN S++ ++VG Q E A + F + K++V
Sbjct: 321 SALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEM--KDLV 378
Query: 358 VWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGA----CALQAALHPGKE 413
G+ +D+ V+LL A L+ G+E
Sbjct: 379 -----------------------------GINSDS--YVVLLSAFSEFSVLEEGRRKGRE 407
Query: 414 IHAYILRMGVQMDKKLIST-LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
+HA+++R G+ +K I LV+MY+K G + A +F+ +E+D V +N +I+ +
Sbjct: 408 VHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNE 467
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
E A F M G P T ++ LS+ G + +GE+
Sbjct: 468 CSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQ 509
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 141/336 (41%), Gaps = 65/336 (19%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K GL +N L+ +Y++ E K+F MPE + SWN++I A
Sbjct: 511 HCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGA------- 563
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
L DS E + A+K F++M + T + L
Sbjct: 564 -----LSDS-------------------EASVSQAVKYFLQMMRGG--WGLSRVTFINIL 597
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ L Q+HA ++K ++L+ Y KC
Sbjct: 598 SAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKC------------------- 638
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
GEM K F R E D VSWN++ISGY+ N + + L M +
Sbjct: 639 -------------GEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQ 685
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G R + TFA+ LSAC + ++ E+H+ ++ L S+ V S +VD+Y KC ++Y
Sbjct: 686 KGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDY 745
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHF 348
A L +RN +S +SMI GY+ G+ E+A + F
Sbjct: 746 ASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLF 781
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 186/441 (42%), Gaps = 51/441 (11%)
Query: 165 SLIDMYSKCRCYEEACRV--------FEGCTEEVNLISKNAMVAACCREGEMEMALKTFW 216
SLI+ Y C EEA + F G NL N ++ R G++ A K F
Sbjct: 76 SLINRYQGSCCSEEARELHLQSIKYGFVG-----NLFLSNTLINIYVRIGDLGSAQKLFD 130
Query: 217 RQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC--CGLRN 274
N V+W LISGY QNG +E F M G N + F SAL AC G
Sbjct: 131 EMSNRN-LVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSG 189
Query: 275 VKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC-ENMNYAESMLLLKGVRNSFSISSMIV 333
K +IH + K S+ V + ++ +Y C ++ N A S+ G+RNS S +S+I
Sbjct: 190 CKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIIS 249
Query: 334 GYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDAL 393
YS +G+ A F S+ ++ + G+ N L++ +
Sbjct: 250 VYSRRGDAVSAYDLFSSMQKEGL--------GFSFKPNEYTFGSLITTACSS-------- 293
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF 453
+ G C L+ L A + + G D + S LV +++ G A+ IF+
Sbjct: 294 ---VDFGLCVLEQML-------ARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQM 343
Query: 454 IERDLVLYNVMIACYAHHGHEEKAILLFEEMLE-KGIKPDAVTFVAILSAFRHCGSVEMG 512
R++V N ++ E A +F EM + GI D ++V +LSAF +E G
Sbjct: 344 GVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSD--SYVVLLSAFSEFSVLEEG 401
Query: 513 EKYFNSMTADYKISPETDHYAC----MIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFL 568
+ + A + D+ ++++Y ++ + A + + E+D+V S +
Sbjct: 402 RRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFE-LMVEKDSVSWNSLI 460
Query: 569 NVCRLNRNAELAGEAEEKLLR 589
+ N +E A E+ ++ R
Sbjct: 461 SGLDQNECSEDAAESFHRMRR 481
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L+ + H I+A L + + L+ +YSK + + + F+ MP RNV+SWN++IS
Sbjct: 708 LERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISG 767
Query: 66 CIKSHDLKQARSLF-----DSSPHKDLVTYNSML--CGYIN--AEGYE 104
+ ++A LF D P D VT+ +L C ++ EG+E
Sbjct: 768 YARHGHGEKALKLFTRMMLDGQP-PDHVTFVGVLSACSHVGFVEEGFE 814
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 200/759 (26%), Positives = 341/759 (44%), Gaps = 159/759 (20%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSW------------- 59
H + I +G +T N LI +Y K+ L ++K+F+ + R+ SW
Sbjct: 187 HAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYE 246
Query: 60 --------NTIISACIK-----------------------------------SHDLKQAR 76
++SAC K S +L A
Sbjct: 247 EEAMLLFCQIVLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAE 306
Query: 77 SLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCV 136
+F +D V+YNS++ G + +GY AL LF +M + + D TV S L+ C
Sbjct: 307 QIFHCMSQRDRVSYNSLISG-LAQQGYINRALALFKKMNLDCQ--KPDCVTVASLLSACA 363
Query: 137 KLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR----------CY------EEAC 180
+ + G+Q H++ +K + SL+D+Y KC CY ++
Sbjct: 364 SVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSF 423
Query: 181 RVF-----EG--------------CTE-------------------EVNLISKNAMVAAC 202
++F EG CT + N+ + ++
Sbjct: 424 QIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMY 483
Query: 203 CREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTF 262
+ G+++ ALK F R E ND VSW +I+GY Q+ E L LF M + G++ + F
Sbjct: 484 AKHGKLDHALKIFRRLKE-NDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGF 542
Query: 263 ASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGV 322
ASA+SAC G++ + ++IH+ +G + + + +V +Y +C
Sbjct: 543 ASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARC--------------- 587
Query: 323 RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF 382
G + EA FD + K+ V W +L SG+ ++ E ++ ++
Sbjct: 588 ----------------GKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQ- 630
Query: 383 VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGN 442
+ K G+ ++ + A A A + GK+IH I + G + ++ + L+ +Y+KCG
Sbjct: 631 MNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGT 690
Query: 443 MTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
+ D + +N MI Y+ HG +A+ LFE+M + + P+ VTFV +LSA
Sbjct: 691 I-------------DDISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSA 737
Query: 503 FRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAV 562
H G V+ G YF SM+ + + P+ +HYAC++DL GR+ L +A F++ +P + DA+
Sbjct: 738 CSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAM 797
Query: 563 ILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMR 622
+ + L+ C +++N ++ A LL LE + A YV ++N+YA G W R R+ M+
Sbjct: 798 VWRTLLSACNVHKNIDIGEFAASHLLELEPKDSATYVLVSNMYAVSGKWDCRDRTRQMMK 857
Query: 623 GMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+ G SWV V++ +H F GD +HP+ + IY L
Sbjct: 858 DRGVKKEPGRSWVEVDNSVHAFFAGDQNHPRADMIYEYL 896
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 141/587 (24%), Positives = 241/587 (41%), Gaps = 117/587 (19%)
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
DL A ++FD P + L +N + +I AE LF M + +++ DE
Sbjct: 112 DLNCAVNVFDEMPIRSLSCWNRIFNTFI-AERLMGRVPGLFRRMLT--KNVEFDERIFAV 168
Query: 131 TLNLCV-KLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE----- 184
L C ++ F Q+HA + + ++S F + LID+Y K A +VFE
Sbjct: 169 VLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKAR 228
Query: 185 ---------------GCTEEVNLISKNAMVAACC-------------------------- 203
G EE L+ +++AC
Sbjct: 229 DSVSWVAMISGLSQNGYEEEAMLLFCQIVLSACTKVEFFEFGKQLHGLVLKQGFSSETYV 288
Query: 204 ---------REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
R G + A + F + D VS+N+LISG Q G L LF +M +
Sbjct: 289 CNALVTLYSRSGNLSSAEQIFHCMSQ-RDRVSYNSLISGLAQQGYINRALALFKKMNLDC 347
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
+ + T AS LSAC + + K+ HS+ +K G+ S+ V ++D+Y KC ++ A
Sbjct: 348 QKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAH 407
Query: 315 SMLLLKG--------------------VRNSFS--------------------------- 327
L G V N F+
Sbjct: 408 EFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKT 467
Query: 328 -------ISSMIVG-YSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLL 379
+SS+++ Y+ G ++ A + F L E +VV WTA+ +GY + +L
Sbjct: 468 GFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLF 527
Query: 380 SEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
E + +G+ +D + + ACA AL G++IHA G D + + LV +Y++
Sbjct: 528 KE-MQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYAR 586
Query: 440 CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
CG + A F +D V +N +++ +A G+ E+A+ +F +M + G++ ++ TF +
Sbjct: 587 CGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSA 646
Query: 500 LSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLE 546
+SA + +V +G K + M ET+ +I LY + ++
Sbjct: 647 VSAAANIANVRIG-KQIHGMIRKTGYDSETEVSNALITLYAKCGTID 692
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 165/374 (44%), Gaps = 53/374 (14%)
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+ EGC + ++ G++ A+ F P + WN + + ++
Sbjct: 87 LLEGCLNSRSFYDGLKLIDFYLAFGDLNCAVNVFDEMP-IRSLSCWNRIFNTFIAERLMG 145
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCG-LRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
LF RM V ++E FA L C G + + ++IH+ + +G S+ F+ + +
Sbjct: 146 RVPGLFRRMLTKNVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPL 205
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
+D+Y K G + A++ F++L ++ V W
Sbjct: 206 IDLYFK-------------------------------NGFLSSAKKVFENLKARDSVSWV 234
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILV--ILLGACALQAALHPGKEIHAYI 418
A+ SG +++ G +A++L I+L AC GK++H +
Sbjct: 235 AMISG-----------------LSQNGYEEEAMLLFCQIVLSACTKVEFFEFGKQLHGLV 277
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
L+ G + + + LV +YS+ GN++ AE IF +RD V YN +I+ A G+ +A+
Sbjct: 278 LKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRAL 337
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
LF++M KPD VT ++LSA G++ G K F+S ++ + ++DL
Sbjct: 338 ALFKKMNLDCQKPDCVTVASLLSACASVGALPNG-KQFHSYAIKAGMTSDIVVEGSLLDL 396
Query: 539 YGRANQLEKAIEFM 552
Y + + ++ A EF
Sbjct: 397 YVKCSDIKTAHEFF 410
>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Brachypodium distachyon]
Length = 822
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 172/602 (28%), Positives = 301/602 (50%), Gaps = 68/602 (11%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N +I K L AR LFD +++LV++ +M+ GY+ +A+A+ +F ++ + E
Sbjct: 254 NALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQ-NSCDAEAMAMFWQL--SQE 310
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
+ D F S LN C L + GRQ+HA +K + ++ + +SLIDMY+KC EA
Sbjct: 311 GWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEA 370
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
VFE E+ DA+S+N +I GY + GD
Sbjct: 371 RAVFEALAED---------------------------------DAISYNAMIEGYSRLGD 397
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
+ +F +M ++ + TF S L ++ +K+IH ++K+G + + S
Sbjct: 398 LAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSS 457
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
++DVY K FS+ +E+A+ F+ + +++V+W
Sbjct: 458 LIDVYSK-------------------FSL------------VEDAKAVFNLMHNRDMVIW 486
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
A+ G + + E L ++ G+ + V L+ + ++ G++ HA I+
Sbjct: 487 NAMIFGLAQNEQGEEAVKLFNQLQVS-GLAPNEFTFVALVTVASTLVSMFHGQQFHAQII 545
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
+ G D + + L+DMY+KCG + ++F++ + +D++ +N MI+ YA HG E+A+
Sbjct: 546 KAGADSDHHVSNALIDMYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALY 605
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
+F M G++P+ VTFV +LSA H G V+ G ++F+ M Y I P T+HYA +++L+
Sbjct: 606 VFRMMGGTGVEPNYVTFVGVLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLF 665
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYV 599
GR+ +L A EF++ +P E A + S L+ C L N E+ A E L + + V
Sbjct: 666 GRSGKLHAAKEFIERMPIEPAAAVWRSLLSACHLFGNVEIGRYATEMALLADPADSGPSV 725
Query: 600 QLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYS 659
++N+YA+ G W++ ++R+ M + G SW+ V E+H F HP+ + IYS
Sbjct: 726 LMSNIYASRGLWSDAQKLRQGMDCAGVVKEPGYSWIEVMKEVHTFIARGREHPEADVIYS 785
Query: 660 VL 661
+L
Sbjct: 786 LL 787
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 136/540 (25%), Positives = 243/540 (45%), Gaps = 102/540 (18%)
Query: 11 ICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSH 70
+ H +A+ G N L+ YSK +R++R+LFD MP +N+ SW + IS +
Sbjct: 32 LAHARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQ-- 89
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
G E DA+ LF Q A +EF + S
Sbjct: 90 ------------------------------HGCEEDAVALFAAFQRASGGEAPNEFLLAS 119
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L C + V FG+Q+H V+ D + + ++LI++Y+K C + A VF+
Sbjct: 120 ALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALP--- 176
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
+ + V+W +I+GY Q G L+LF +M
Sbjct: 177 ------------------------------VKNPVTWTAVITGYSQIGQGGVALELFGKM 206
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
G +GVR + ASA+SAC L ++ ++ H + + + ++ V + ++D+YCKC +
Sbjct: 207 GLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRL 266
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
+ A + FD + +N+V WT + +GY++
Sbjct: 267 SLARKL-------------------------------FDCMENRNLVSWTTMIAGYMQ-N 294
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
+C+A + +++EG D +L +C AA+ G+++HA+ ++ ++ D+ +
Sbjct: 295 SCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVK 354
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
++L+DMY+KC ++T A +F+ E D + YN MI Y+ G AI +F +M +K
Sbjct: 355 NSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLK 414
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA--CMIDLYGRANQLEKA 548
P +TFV++L ++E+ ++ + K D YA +ID+Y + + +E A
Sbjct: 415 PSPLTFVSLLGVSSSQSAIELSKQIHGLIV---KSGTSLDLYAGSSLIDVYSKFSLVEDA 471
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 184/395 (46%), Gaps = 43/395 (10%)
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV-- 248
+L N ++ A + G + A + F R P N VSW + IS + Q+G E+ + LF
Sbjct: 45 DLFLANLLLRAYSKLGRVRDARRLFDRMPHKN-LVSWGSAISMHAQHGCEEDAVALFAAF 103
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
+ G NE ASAL AC R V +++H ++ GL N +V + ++++Y K
Sbjct: 104 QRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKV- 162
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
G ++ A FD+L KN V WTA+ +GY +
Sbjct: 163 ------------------------------GCIDAAMLVFDALPVKNPVTWTAVITGYSQ 192
Query: 369 AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK 428
+L + + +GV D +L + AC+ L G++ H Y R+ V+ D
Sbjct: 193 IGQGGVALELFGK-MGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDAS 251
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
+I+ L+D+Y KC ++ A +F R+LV + MIA Y + + +A+ +F ++ ++G
Sbjct: 252 VINALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEG 311
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA--CMIDLYGRANQLE 546
+PD +IL++ CGS+ + K + E+D Y +ID+Y + L
Sbjct: 312 WQPDVFACASILNS---CGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLT 368
Query: 547 KAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAG 581
+A +++ E+DA+ + + +R +LAG
Sbjct: 369 EARAVFEAL-AEDDAISYNAMIE--GYSRLGDLAG 400
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 112/257 (43%), Gaps = 67/257 (26%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K+G +L + LI +YSK +L+ +++ +F+ M R++ WN +I +
Sbjct: 440 HGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQ---- 495
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
N +G E A+KLF ++Q + + +EFT + +
Sbjct: 496 --------------------------NEQGEE--AVKLFNQLQVSG--LAPNEFTFVALV 525
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ L+++ G+Q HA ++K D+ ++LIDMY+KC +E +FE T ++
Sbjct: 526 TVASTLVSMFHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFIKEGRLLFE-STLGKDV 584
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
I N+M+ S Y Q+G AEE L +F MG
Sbjct: 585 ICWNSMI--------------------------------STYAQHGQAEEALYVFRMMGG 612
Query: 253 NGVRWNEHTFASALSAC 269
GV N TF LSAC
Sbjct: 613 TGVEPNYVTFVGVLSAC 629
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 86/200 (43%), Gaps = 17/200 (8%)
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
HA + G D L + L+ YSK G + A +F ++LV + I+ +A HG E
Sbjct: 34 HARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCE 93
Query: 475 EKAILLFE--EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
E A+ LF + G P+ + L A +V G++ +I + + Y
Sbjct: 94 EDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAV---RIGLDGNVY 150
Query: 533 --ACMIDLYGRANQLEKAIEFMKSIPTEED----AVILGSFLNVCRLNRNAELAGEAEEK 586
+I+LY + ++ A+ ++P + AVI G + + + EL G+
Sbjct: 151 VGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITG-YSQIGQGGVALELFGK---- 205
Query: 587 LLRLEGNNKARYVQLANVYA 606
+ L+G R+V + V A
Sbjct: 206 -MGLDGVRPDRFVLASAVSA 224
>gi|357510067|ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355500337|gb|AES81540.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1024
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 185/642 (28%), Positives = 317/642 (49%), Gaps = 44/642 (6%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNV----FSWNTIISACIKSH--DLKQARSLF 79
I TN + I + +R+ +++ M + F + +I+ C +H DL A ++F
Sbjct: 155 IITNPTLLIMESCSTMRQLKQIQARMTLTGIITHAFPVSRVIAFCALAHSGDLHYAHTIF 214
Query: 80 DSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLL 139
+ + +N+M+ GY NA A F+ M + MD + L C +
Sbjct: 215 NRVEQPNTFMWNTMIRGYQNARK-PIFAFSFFVYMFQL--RVEMDSRSFVFALKACQQFE 271
Query: 140 NVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMV 199
V G ++ + K D + LI Y++ + A +VF+ +++
Sbjct: 272 TVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDK---------- 321
Query: 200 AACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNE 259
D V+W T+I GY + +EE +++F M + V NE
Sbjct: 322 -----------------------DVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNE 358
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLL 319
T + +SAC + N++ K +H V + + + + + ++D+Y KC+ + A +
Sbjct: 359 VTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDR 418
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLL 379
++ +S +SM+ GY+ G++E ARR FD KN V W+A+ +GY + + L
Sbjct: 419 MATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLF 478
Query: 380 SEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY-ILRMGVQMDKKLISTLVDMYS 438
E + + GVV LV +L AC L+ G IH Y ++ + + L + +VDMY+
Sbjct: 479 HEMMER-GVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYA 537
Query: 439 KCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVA 498
KCG++ A +F ER+L+ +N MIA YA +G ++AI +F++M G +P+ +TFV+
Sbjct: 538 KCGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVS 597
Query: 499 ILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE 558
+L+A H G + G +YF++M Y I PE HYACM+DL GR LE+A + + ++P +
Sbjct: 598 LLTACSHGGLISEGREYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQ 657
Query: 559 EDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIR 618
G+ LN CR++ N ELA + LLRL+ + YV LAN A + W+++ R+R
Sbjct: 658 PCEAAWGALLNACRMHGNVELARLSAHNLLRLDPEDSGIYVLLANTCANDRKWSDVRRVR 717
Query: 619 KQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSV 660
M+ + G S + ++ F V D SHP++ IY +
Sbjct: 718 SLMKDKGVKKIPGYSLIEIDGGFVEFLVADESHPQSEEIYKL 759
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 173/363 (47%), Gaps = 43/363 (11%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACI 67
E++ C V K G + N LIH Y++ LL+ +R++FDE +++V +W T+I
Sbjct: 277 ESVYCVVW--KMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDG-Y 333
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFT 127
+HD + E E L L H+ +E T
Sbjct: 334 AAHDCSE--------------------------EAMEVFELMLL-------SHVEPNEVT 360
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
+ + ++ C + N+ G+++H + + + S ++L+DMY KC C +A +F+
Sbjct: 361 LIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMA 420
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
+ ++ S +MV + G++E A + F + P N AV W+ +I+GY QN +E LKLF
Sbjct: 421 TK-DVYSWTSMVNGYAKCGDLESARRFFDQTPRKN-AVCWSAMIAGYSQNNKPKESLKLF 478
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS-NPFVSSGIVDVYCK 306
M E GV EHT S LSAC L + IH + + +I + + + IVD+Y K
Sbjct: 479 HEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAK 538
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT----EKNVVVWTAL 362
C +++ A + RN S ++MI GY+ G ++A FD + E N + + +L
Sbjct: 539 CGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSL 598
Query: 363 FSG 365
+
Sbjct: 599 LTA 601
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 133/275 (48%), Gaps = 7/275 (2%)
Query: 288 NGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGV-RNSFSISSMIVGYSL--QGNMEEA 344
N +I+NP + I++ + ++ + L G+ ++F +S +I +L G++ A
Sbjct: 153 NVIITNPTLL--IMESCSTMRQLKQIQARMTLTGIITHAFPVSRVIAFCALAHSGDLHYA 210
Query: 345 RRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACAL 404
F+ + + N +W + GY A+ F ++ + V D+ V L AC
Sbjct: 211 HTIFNRVEQPNTFMWNTMIRGYQNARKPIFAFSFFV-YMFQLRVEMDSRSFVFALKACQQ 269
Query: 405 QAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVM 464
+ G+ ++ + +MG + + + L+ Y++ G + A +F ++D+V + M
Sbjct: 270 FETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTM 329
Query: 465 IACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYK 524
I YA H E+A+ +FE ML ++P+ VT +A++SA G++EMG++ +
Sbjct: 330 IDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNM 389
Query: 525 ISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE 559
+ H A ++D+Y + + L A E + T++
Sbjct: 390 RCSLSLHNA-LLDMYVKCDCLVDARELFDRMATKD 423
>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
Length = 637
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 181/611 (29%), Positives = 292/611 (47%), Gaps = 70/611 (11%)
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
++SA + ++ R FD P D+V++N+++ YI + D LF + I
Sbjct: 1 MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDF--DRCWLFFRGMLL-QGI 57
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
E ++ L+ C + GR + ++ T + ++L+ MY K +A
Sbjct: 58 NPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAAS 117
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
VF + M+ + D V+W+ +++ Y +NG
Sbjct: 118 VF------------------------LRMSHR---------DVVAWSAMVAAYARNGHPR 144
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E L LF +M +GV N+ T S L AC L +++ +H V G+ S V + +V
Sbjct: 145 EALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALV 204
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
++Y KC G +E A F + EKNVV W+A
Sbjct: 205 NLYGKC-------------------------------GRIEAAVEAFGQIVEKNVVAWSA 233
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIH--AYIL 419
+ + Y + +L + EG+V ++ V +L ACA AAL G+ IH +L
Sbjct: 234 ISAAYARNDRNRDAIRVLHR-MDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVL 292
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
G++ D +++ LV+MYSKCGN+ A +F DLVL+N +IA A HG EKA+
Sbjct: 293 GGGLESDVYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALE 352
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
LFE M +G++P +TF ++L A H G ++ G K+F S D+ I PE +H+ CM+DL
Sbjct: 353 LFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLL 412
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYV 599
GRA + + + + +P E V +FL CR RN + A A E L +L+ +A YV
Sbjct: 413 GRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDRAIWAAENLFQLDPRKRAPYV 472
Query: 600 QLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYS 659
L+N+YA G W+++ R+R+ M+ + AG SW+ V+ +H F GD+ HP+ I++
Sbjct: 473 LLSNMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHA 532
Query: 660 VLAIFTGELYE 670
L T + E
Sbjct: 533 ELQRLTKLMKE 543
>gi|224065565|ref|XP_002301860.1| predicted protein [Populus trichocarpa]
gi|222843586|gb|EEE81133.1| predicted protein [Populus trichocarpa]
Length = 933
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 168/510 (32%), Positives = 277/510 (54%), Gaps = 35/510 (6%)
Query: 196 NAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGV 255
N ++A M+ A+ + Q E+ + +N +I G+VQ+ + L+L+V+M V
Sbjct: 18 NQFISALSTFNRMDYAVLAY-TQMEIPNVFVYNAMIKGFVQSYQPVQALELYVQMLRANV 76
Query: 256 RWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAES 315
+TF S + AC + ++ A+ +H V +NG S+ FV + +VD Y + +
Sbjct: 77 SPTSYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQTSLVDFYSSMGRIEESVR 136
Query: 316 MLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN---C 372
+ R+ F+ ++M+ G G+M A R FD + ++N+ W L GY + +
Sbjct: 137 VFDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMMPDRNLATWNTLIDGYARLREVDVA 196
Query: 373 EALF------DLLS------------EF---------VTKEGVVTDALILVILLGACALQ 405
E LF D++S F + K G+ D + + ++ ACA
Sbjct: 197 ELLFNQMPARDIISWTTMINCYSQNKRFREALGVFNEMAKHGISPDEVTMATVISACAHL 256
Query: 406 AALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMI 465
AL GKEIH YI++ G +D + S L+DMY+KCG++ + ++F E++L +N +I
Sbjct: 257 GALDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRSLLMFFKLREKNLFCWNSVI 316
Query: 466 ACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKI 525
A HG+ E+A+ +F++M + IKP+ VTFV++LSA H G +E G K F SMT D+ I
Sbjct: 317 EGLAVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACNHAGLIEEGRKRFASMTRDHSI 376
Query: 526 SPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEE 585
P +HY CM+DL +A LE+A++ ++++ E +AVI G+ L+ C+L+RN E+A A
Sbjct: 377 PPGVEHYGCMVDLLSKAGLLEEALQLIRTMKLEPNAVIWGALLSGCKLHRNLEIAQVAAN 436
Query: 586 KLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMR--GMKGNRFAGCSWVYVEHEIHI 643
KL+ LE N Y L N+ A W E +IR M+ G++ R G SW+ +E ++H
Sbjct: 437 KLMVLEPGNSGYYTLLVNMNAEVNRWGEAAKIRLTMKEQGVE-KRCPGSSWIEMESQVHQ 495
Query: 644 FTVGDVSHPKTNAIYSVLAIFTGELYEIAG 673
F D SH ++ IYS+LA G++ ++AG
Sbjct: 496 FAASDKSHAASDEIYSLLAELDGQM-KLAG 524
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 154/328 (46%), Gaps = 36/328 (10%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEA-DALKLFIEMQSAD 118
N ISA + + A + ++ YN+M+ G++ + Y+ AL+L+++M A+
Sbjct: 18 NQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFV--QSYQPVQALELYVQMLRAN 75
Query: 119 EHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEE 178
+ +T S + C + + F +H + + D+ F +SL+D YS EE
Sbjct: 76 --VSPTSYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQTSLVDFYSSMGRIEE 133
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN---------------- 222
+ RVF+ E ++ + MV+ R G+M A + F P+ N
Sbjct: 134 SVRVFDEMPER-DVFAWTTMVSGLVRVGDMSSAGRLFDMMPDRNLATWNTLIDGYARLRE 192
Query: 223 --------------DAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSA 268
D +SW T+I+ Y QN E L +F M ++G+ +E T A+ +SA
Sbjct: 193 VDVAELLFNQMPARDIISWTTMINCYSQNKRFREALGVFNEMAKHGISPDEVTMATVISA 252
Query: 269 CCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSI 328
C L + KEIH +++++G + ++ S ++D+Y KC +++ + M +N F
Sbjct: 253 CAHLGALDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRSLLMFFKLREKNLFCW 312
Query: 329 SSMIVGYSLQGNMEEARRHFDSLTEKNV 356
+S+I G ++ G EEA FD + + +
Sbjct: 313 NSVIEGLAVHGYAEEALAMFDKMEREKI 340
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 130/296 (43%), Gaps = 67/296 (22%)
Query: 4 LNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
L EA+ HV + G L+ YS + ES ++FDEMPER+VF+W T++
Sbjct: 96 LRFAEAVHGHVW--RNGFDSHVFVQTSLVDFYSSMGRIEESVRVFDEMPERDVFAWTTMV 153
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEA------------------ 105
S ++ D+ A LFD P ++L T+N+++ GY +
Sbjct: 154 SGLVRVGDMSSAGRLFDMMPDRNLATWNTLIDGYARLREVDVAELLFNQMPARDIISWTT 213
Query: 106 ------------DALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVK 153
+AL +F EM A I DE T+ + ++ C L + G+++H ++++
Sbjct: 214 MINCYSQNKRFREALGVFNEM--AKHGISPDEVTMATVISACAHLGALDLGKEIHYYIMQ 271
Query: 154 TSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALK 213
+ + S+LIDMY+KC G ++ +L
Sbjct: 272 HGFNLDVYIGSALIDMYAKC--------------------------------GSLDRSLL 299
Query: 214 TFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
F++ E N WN++I G +G AEE L +F +M ++ N TF S LSAC
Sbjct: 300 MFFKLREKN-LFCWNSVIEGLAVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSAC 354
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 99/252 (39%), Gaps = 49/252 (19%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H ++ G L + LI +Y+K L S +F ++ E+N+F WN++I
Sbjct: 266 HYYIMQHGFNLDVYIGSALIDMYAKCGSLDRSLLMFFKLREKNLFCWNSVIEG------- 318
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+ GY +AL +F +M+ E I+ + T S L
Sbjct: 319 -------------------------LAVHGYAEEALAMFDKMER--EKIKPNGVTFVSVL 351
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFA-VSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
+ C + GR+ A M + + G ++D+ SK EEA ++ E N
Sbjct: 352 SACNHAGLIEEGRKRFASMTRDHSIPPGVEHYGCMVDLLSKAGLLEEALQLIRTMKLEPN 411
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY---VQNGDAE-----EG 243
+ A+++ C +E+A Q N + SGY + N +AE E
Sbjct: 412 AVIWGALLSGCKLHRNLEIA------QVAANKLMVLEPGNSGYYTLLVNMNAEVNRWGEA 465
Query: 244 LKLFVRMGENGV 255
K+ + M E GV
Sbjct: 466 AKIRLTMKEQGV 477
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/154 (19%), Positives = 65/154 (42%), Gaps = 17/154 (11%)
Query: 414 IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH 473
++A +++ D L++ + S M YA + + ++ +YN MI +
Sbjct: 1 MYAVMVKTNTNQDCYLMNQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQ 60
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEM--------GEKYFNSMTADYKI 525
+A+ L+ +ML + P + TF +++ A CG V G + N D +
Sbjct: 61 PVQALELYVQMLRANVSPTSYTFPSLIKA---CGLVSQLRFAEAVHGHVWRNGF--DSHV 115
Query: 526 SPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE 559
+T ++D Y ++E+++ +P +
Sbjct: 116 FVQTS----LVDFYSSMGRIEESVRVFDEMPERD 145
>gi|225459429|ref|XP_002284321.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Vitis vinifera]
Length = 700
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 205/664 (30%), Positives = 306/664 (46%), Gaps = 126/664 (18%)
Query: 51 MPER----NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEAD 106
MPER V SWN IIS C+++ GY D
Sbjct: 1 MPERGLQPTVNSWNGIISGCVQN--------------------------------GYLED 28
Query: 107 ALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSL 166
AL +F M E + T+ S L C L + G+ +HA +K + + S+
Sbjct: 29 ALDMFSRMLWYPEDPNI--ITIASILPACTGLKALRLGKAIHAIALKHGIVGNVYVEGSV 86
Query: 167 IDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMAL-------KTFWRQP 219
IDMYSKC Y+ A +VF E N N M+AA EG++E AL K W+ P
Sbjct: 87 IDMYSKCGSYDYAEKVFVK-AENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWK-P 144
Query: 220 EL--------------------------------NDAVSWNTLISGYVQNGDAEEGLKLF 247
++ + VS+N LISG+ Q+G + E LK+F
Sbjct: 145 DVITYNTILSGHARNGLKTQAFELLSEMVQMGLKPNVVSFNVLISGFQQSGLSYEALKVF 204
Query: 248 VRMGENG------------VRWNEHTFASALSACCGLRNVKC-AKEIHSWVLKNGLISNP 294
M +R N T AL AC L N+ C KEIH + L+NG N
Sbjct: 205 RIMQSPSDGCNPNEVLNLSMRPNPITITGALPACADL-NLWCQGKEIHGYTLRNGFEPNI 263
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
FVSS +VD+Y KC +M + A + F + +
Sbjct: 264 FVSSALVDMYAKCHDM-------------------------------DSANKVFFRIDGR 292
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
N V W AL +GY+ + E L E + EG+ ++ +IL AC AA+ G+ +
Sbjct: 293 NTVSWNALMAGYIYNKQPEEALKLFLEMLG-EGLQPSSITFMILFPACGDIAAIRFGRGL 351
Query: 415 HAYILRMGV-QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH 473
H Y + + ++ + S L+DMY+KCG++ A+ +F + +E+D+ L+N MI+ ++ HG
Sbjct: 352 HGYAAKCQLDELKNAIASALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGM 411
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA 533
A +F +M GI PD +TFV++LSA G VE G KYFNSM Y ++ +HY
Sbjct: 412 ARNAFAVFVQMELLGILPDHITFVSLLSACARDGLVEEGWKYFNSMEISYGVAATLEHYT 471
Query: 534 CMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGN 593
CM+ + G A L++A++F++ +P DA + + L CR++ N E+ A + L LE +
Sbjct: 472 CMVGILGGAGLLDEALDFIRQMPYPPDACMWATLLQACRVHSNPEIGERAAKALFELEPD 531
Query: 594 NKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPK 653
N Y+ L+N+Y + G W +R MRG K CS++ V I F G+ SHP+
Sbjct: 532 NATNYMLLSNIYVSSGMWDFAKNLRSFMRGRKLLTIKECSYLTVGSHICTFKGGESSHPE 591
Query: 654 TNAI 657
I
Sbjct: 592 LEEI 595
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 133/560 (23%), Positives = 227/560 (40%), Gaps = 136/560 (24%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
+++L L +A+ H A+K G+ +I +YSK + K+F + +N WN
Sbjct: 58 LKALRLGKAI--HAIALKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFVKAENKNTAMWN 115
Query: 61 TIISACIKSHDLKQA----RSLFDSSPHKDLVTYNSMLCGY------------------- 97
+I+A + ++ A RS+ D++TYN++L G+
Sbjct: 116 EMIAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAFELLSEMVQM 175
Query: 98 ---------------INAEGYEADALKLFIEMQSADE----------HIRMDEFTVTSTL 132
G +ALK+F MQS + +R + T+T L
Sbjct: 176 GLKPNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGAL 235
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C L G+++H + ++ + + F S+L+DMY+KC
Sbjct: 236 PACADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCH------------------ 277
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+M+ A K F+R N VSWN L++GY+ N EE LKLF+ M
Sbjct: 278 --------------DMDSANKVFFRIDGRN-TVSWNALMAGYIYNKQPEEALKLFLEMLG 322
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL--ISNPFVSSGIVDVYCKCENM 310
G++ + TF AC + ++ + +H + K L + N ++S ++D+Y KC
Sbjct: 323 EGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLDELKNA-IASALIDMYAKC--- 378
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL---FSGYV 367
G++ +A+ FDS EK+V +W A+ FS +
Sbjct: 379 ----------------------------GSILDAKSVFDSEVEKDVPLWNAMISAFSVHG 410
Query: 368 KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG-KEIHAYILRMGVQMD 426
A+N A+F + G++ D + V LL ACA + G K ++ + GV
Sbjct: 411 MARNAFAVFVQMELL----GILPDHITFVSLLSACARDGLVEEGWKYFNSMEISYGVAAT 466
Query: 427 KKLISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMI-ACYAHHGH---EEKAILLF 481
+ + +V + G + A + I Q D ++ ++ AC H E A LF
Sbjct: 467 LEHYTCMVGILGGAGLLDEALDFIRQMPYPPDACMWATLLQACRVHSNPEIGERAAKALF 526
Query: 482 EEMLEKGIKPDAVTFVAILS 501
E ++PD T +LS
Sbjct: 527 E------LEPDNATNYMLLS 540
>gi|413925171|gb|AFW65103.1| hypothetical protein ZEAMMB73_773985 [Zea mays]
Length = 567
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 163/485 (33%), Positives = 270/485 (55%), Gaps = 14/485 (2%)
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
A R+F+ +++S N+++A C G+++ A F PE N A +WN +++G V+ G
Sbjct: 67 ARRLFDEAMPSRDVVSWNSIIAGCLAHGDLDAASAYFAGAPERNVA-TWNAMLAGLVRLG 125
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
+ +LF M E V ++ + + V+ A+E+ + L+S + S
Sbjct: 126 RVVDAQRLFDEMPERNVV----SYTTMVDWLARRGEVERAREVFDSMPDRNLVSWAAMIS 181
Query: 299 GIVDVYCKCENMNYAESMLLLKGV--RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNV 356
G V EN + E+ L + + +N + ++MI G+ QG+++ ARR FD + K+V
Sbjct: 182 GCV------ENGMFVEARELFEAMPEKNVVACTAMITGHCKQGDVDSARRLFDGIRAKDV 235
Query: 357 VVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHA 416
+ W A+ +GYV + E L + + +EGV D L+ +L AC+ A L GK HA
Sbjct: 236 ISWNAMIAGYVHNGHGEEAMRLHA-LMFREGVKPDHATLIAVLTACSALALLRQGKSTHA 294
Query: 417 YILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
++ ++ + L+ MYSKCGN+ +E++F N +D+V +N +IA YA HG +K
Sbjct: 295 IAIKAMLESGISFSNALMTMYSKCGNVGESELVFINLRTKDIVSWNTIIAAYAQHGKYQK 354
Query: 477 AILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMI 536
I LF EM G+ PD +TF+++LSA H G V+ K F+ M++ Y ISP +HYAC++
Sbjct: 355 VIALFHEMEVTGLIPDDITFLSVLSACGHVGMVDASLKLFDLMSSKYAISPRAEHYACIV 414
Query: 537 DLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKA 596
D+ RA QLEKA ++K +P + + + GS L C+++ N +L A + L++ + +
Sbjct: 415 DILSRAGQLEKASSYIKHMPLKAEKNVWGSLLGACQIHGNVQLGELAAKMLVQSDSQSSG 474
Query: 597 RYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNA 656
YV L+N+YAA G W ++ +IR QM+ + G SW + +E+H+F GD SHP+
Sbjct: 475 PYVILSNIYAAAGMWGQVNQIRGQMKERGVKKQPGYSWTEIGNEVHMFVGGDASHPEMRK 534
Query: 657 IYSVL 661
I S L
Sbjct: 535 IISEL 539
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 121/462 (26%), Positives = 222/462 (48%), Gaps = 32/462 (6%)
Query: 41 LRESRKLFDE-MPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYIN 99
L +R+LFDE MP R+V SWN+II+ C+ DL A + F +P +++ T+N+ML G +
Sbjct: 64 LPAARRLFDEAMPSRDVVSWNSIIAGCLAHGDLDAASAYFAGAPERNVATWNAMLAGLVR 123
Query: 100 AEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDAS 159
G DA +LF DE + + T+ ++ + V R++ M D +
Sbjct: 124 L-GRVVDAQRLF------DEMPERNVVSYTTMVDWLARRGEVERAREVFDSM----PDRN 172
Query: 160 GFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQP 219
+ +++I + + EA +FE E+ N+++ AM+ C++G+++ A + F
Sbjct: 173 LVSWAAMISGCVENGMFVEARELFEAMPEK-NVVACTAMITGHCKQGDVDSARRLF-DGI 230
Query: 220 ELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAK 279
D +SWN +I+GYV NG EE ++L M GV+ + T + L+AC L ++ K
Sbjct: 231 RAKDVISWNAMIAGYVHNGHGEEAMRLHALMFREGVKPDHATLIAVLTACSALALLRQGK 290
Query: 280 EIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQG 339
H+ +K L S S+ ++ +Y KC N+ +E + + ++ S +++I Y+ G
Sbjct: 291 STHAIAIKAMLESGISFSNALMTMYSKCGNVGESELVFINLRTKDIVSWNTIIAAYAQHG 350
Query: 340 NMEEARRHF-----DSLTEKNVVVWTALFS-GYVKAQNCE-ALFDLL-SEFVTKEGVVTD 391
++ F L ++ + L + G+V + LFDL+ S++
Sbjct: 351 KYQKVIALFHEMEVTGLIPDDITFLSVLSACGHVGMVDASLKLFDLMSSKYAISPRAEHY 410
Query: 392 ALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQ 451
A I+ IL A L+ A +YI M ++ +K + +L+ GN+ E+ +
Sbjct: 411 ACIVDILSRAGQLEKA-------SSYIKHMPLKAEKNVWGSLLGACQIHGNVQLGELAAK 463
Query: 452 NFIERDLV---LYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
++ D Y ++ YA G + + +M E+G+K
Sbjct: 464 MLVQSDSQSSGPYVILSNIYAAAGMWGQVNQIRGQMKERGVK 505
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 125/277 (45%), Gaps = 69/277 (24%)
Query: 25 TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACI----------------- 67
++ ++ ++ + +R++FD MP+RN+ SW +IS C+
Sbjct: 142 VVSYTTMVDWLARRGEVERAREVFDSMPDRNLVSWAAMISGCVENGMFVEARELFEAMPE 201
Query: 68 --------------KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIE 113
K D+ AR LFD KD++++N+M+ GY++ G+ +A++L
Sbjct: 202 KNVVACTAMITGHCKQGDVDSARRLFDGIRAKDVISWNAMIAGYVH-NGHGEEAMRLHAL 260
Query: 114 MQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVS-SLIDMYSK 172
M E ++ D T+ + L C L + G+ HA +K + SG + S +L+ MYSK
Sbjct: 261 MFR--EGVKPDHATLIAVLTACSALALLRQGKSTHAIAIKAMLE-SGISFSNALMTMYSK 317
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C E+ VF +NL +K D VSWNT+I+
Sbjct: 318 CGNVGESELVF------INLRTK---------------------------DIVSWNTIIA 344
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
Y Q+G ++ + LF M G+ ++ TF S LSAC
Sbjct: 345 AYAQHGKYQKVIALFHEMEVTGLIPDDITFLSVLSAC 381
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 60/117 (51%), Gaps = 9/117 (7%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L++ H AIKA L +N L+ +YSK + ES +F + +++ SWNTII+A
Sbjct: 286 LRQGKSTHAIAIKAMLESGISFSNALMTMYSKCGNVGESELVFINLRTKDIVSWNTIIAA 345
Query: 66 CIKSHDLKQARSLFD----SSPHKDLVTYNSML--CGYINAEGYEADALKLFIEMQS 116
+ ++ +LF + D +T+ S+L CG++ G +LKLF M S
Sbjct: 346 YAQHGKYQKVIALFHEMEVTGLIPDDITFLSVLSACGHV---GMVDASLKLFDLMSS 399
>gi|347954474|gb|AEP33737.1| chlororespiratory reduction 21 [Nasturtium officinale]
Length = 826
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 189/696 (27%), Positives = 325/696 (46%), Gaps = 108/696 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K+GL + L +Y K +L ++RK+FDE+PERNV +W
Sbjct: 194 HGYVVKSGLHDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAW------------- 240
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
N+++ GY+ G +A++L +M+ E I TV++ L
Sbjct: 241 ------------------NALMVGYVQ-NGMNEEAIRLLSDMRK--EGIEPTRVTVSTCL 279
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ + + G+Q HA + + +S ++ Y
Sbjct: 280 SASANMDGIEEGKQSHAIAIVNGLELDNILGTSNLNFY---------------------- 317
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
C+ G +E A F R E D V+WN LISGYVQ G E+ + + M
Sbjct: 318 ----------CKVGLIEYAEMIFDRMIE-KDVVTWNLLISGYVQQGLVEDAIHMCQLMRL 366
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM-- 310
++++ T ++ +SA +N+K KE+ + +++ S+ ++S VD+Y C ++
Sbjct: 367 ENLKYDCVTLSTLMSAAARTQNLKLGKEVQCYCIRHSFASDIVLASTAVDMYANCGSIID 426
Query: 311 ---------------------NYAESMLLLKGVR------------NSFSISSMIVGYSL 337
YAES L + R N+ + + +I+ +
Sbjct: 427 AKKVFDSVLAKDLILWNTLLSVYAESGLSGEAFRLFYEMQLESVPPNAITWNLIILSFLR 486
Query: 338 QGNMEEARRHFDSLTE----KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDAL 393
G + EA+ F + N+V WT + +G V+ C L + + G+ +A
Sbjct: 487 NGQVNEAKEIFSQMQSSGIFPNLVSWTTMMNGLVQ-NGCSEEAILFLRKMQESGLRPNAF 545
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST-LVDMYSKCGNMTYAEIIFQN 452
+ + L AC+ A+LH G+ +H YI+R LI T LVDMY+KCG++ AE++F++
Sbjct: 546 SITVALSACSNLASLHFGRSVHGYIIRNQQHSSSVLIETSLVDMYAKCGDINKAEMVFRS 605
Query: 453 FIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMG 512
+ DL LYN MI+ YA +G+ ++AI L + + GIKPD +TF ++LSA H G V
Sbjct: 606 KLCSDLPLYNAMISAYALNGNVKEAIALCRRLEDTGIKPDNITFTSLLSACNHAGDVSQA 665
Query: 513 EKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCR 572
+ F M + + I P +HY M+D+ A + +KA+ ++ +P + DA ++ S + C
Sbjct: 666 VEIFTDMVSKHGIKPCLEHYGLMVDILASAGETDKALRLIEEMPYKSDARMIQSLVASCN 725
Query: 573 LNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGC 632
+ EL LL E N YV ++N YA EG+W E+ + R+ M+ + + GC
Sbjct: 726 MKHKTELMDFLSRHLLETEPENSGNYVTISNAYAVEGSWDEVVKTREMMKAKRLKKSPGC 785
Query: 633 SWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
SW+ ++ +H+F D +H + I S+LA+ ++
Sbjct: 786 SWIRIKGGVHVFVANDKTHLRNKEIRSILALLAYDM 821
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 118/488 (24%), Positives = 213/488 (43%), Gaps = 74/488 (15%)
Query: 98 INAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSN- 156
++ G +AL L EM +R+ L CV ++ G+Q+HA ++K +
Sbjct: 43 LSKSGEIREALSLLTEMDF--RKLRIGPEIYGEILQGCVYERDLCTGKQIHARILKNGDF 100
Query: 157 -DASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTF 215
+ + + L+ Y+KC +E A +
Sbjct: 101 YAKNEYIETKLVIFYAKCDAFE---------------------------------ASEVL 127
Query: 216 WRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNV 275
+ + + + SW +I + G EE L FV M +N + + + AC L+
Sbjct: 128 FSKLRVRNVYSWAAIIGVKCRIGLCEEALMGFVEMLQNEIFPDNFVVPNVCKACGALQWS 187
Query: 276 KCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGY 335
+ + +H +V+K+GL FV+S + D+Y KC
Sbjct: 188 RFGRGVHGYVVKSGLHDCVFVASSLADMYGKC---------------------------- 219
Query: 336 SLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALIL 395
G +++AR+ FD + E+NVV W AL GYV+ E LLS+ + KEG+ + +
Sbjct: 220 ---GVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSD-MRKEGIEPTRVTV 275
Query: 396 VILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIE 455
L A A + GK+ HA + G+++D L ++ ++ Y K G + YAE+IF IE
Sbjct: 276 STCLSASANMDGIEEGKQSHAIAIVNGLELDNILGTSNLNFYCKVGLIEYAEMIFDRMIE 335
Query: 456 RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKY 515
+D+V +N++I+ Y G E AI + + M + +K D VT ++SA ++++G K
Sbjct: 336 KDVVTWNLLISGYVQQGLVEDAIHMCQLMRLENLKYDCVTLSTLMSAAARTQNLKLG-KE 394
Query: 516 FNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNR 575
+ + + + +D+Y + A + S+ +D ++ + L+V
Sbjct: 395 VQCYCIRHSFASDIVLASTAVDMYANCGSIIDAKKVFDSV-LAKDLILWNTLLSV---YA 450
Query: 576 NAELAGEA 583
+ L+GEA
Sbjct: 451 ESGLSGEA 458
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 119/501 (23%), Positives = 226/501 (45%), Gaps = 94/501 (18%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
++E H AI GL L I ++ Y K L+ + +FD M E++V +WN +IS
Sbjct: 288 IEEGKQSHAIAIVNGLELDNILGTSNLNFYCKVGLIEYAEMIFDRMIEKDVVTWNLLIS- 346
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
GY+ +G DA+ + M+ E+++ D
Sbjct: 347 ------------------------------GYVQ-QGLVEDAIHMCQLMRL--ENLKYDC 373
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
T+++ ++ + N+ G+++ + ++ S + S+ +DMY+ C +A +VF+
Sbjct: 374 VTLSTLMSAAARTQNLKLGKEVQCYCIRHSFASDIVLASTAVDMYANCGSIIDAKKVFDS 433
Query: 186 CTEEVNLISKNAMVAACCREG----------EMEMA------------LKTFWRQPELND 223
+ +LI N +++ G EM++ + +F R ++N+
Sbjct: 434 VLAK-DLILWNTLLSVYAESGLSGEAFRLFYEMQLESVPPNAITWNLIILSFLRNGQVNE 492
Query: 224 A----------------VSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALS 267
A VSW T+++G VQNG +EE + +M E+G+R N + ALS
Sbjct: 493 AKEIFSQMQSSGIFPNLVSWTTMMNGLVQNGCSEEAILFLRKMQESGLRPNAFSITVALS 552
Query: 268 ACCGLRNVKCAKEIHSWVLKNGLISNP-FVSSGIVDVYCKCENMNYAESMLLLKGVRNSF 326
AC L ++ + +H ++++N S+ + + +VD+Y KC ++N AE + K +
Sbjct: 553 ACSNLASLHFGRSVHGYIIRNQQHSSSVLIETSLVDMYAKCGDINKAEMVFRSKLCSDLP 612
Query: 327 SISSMIVGYSLQGNMEEA----RRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF 382
++MI Y+L GN++EA RR D+ + + + +T+L S A + ++ ++
Sbjct: 613 LYNAMISAYALNGNVKEAIALCRRLEDTGIKPDNITFTSLLSACNHAGDVSQAVEIFTDM 672
Query: 383 VTKEGVVT----DALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYS 438
V+K G+ L++ IL A AL I M + D ++I +LV +
Sbjct: 673 VSKHGIKPCLEHYGLMVDILASAGETDKALR-------LIEEMPYKSDARMIQSLV---A 722
Query: 439 KCGNMTYAEIIFQNFIERDLV 459
C E++ +F+ R L+
Sbjct: 723 SCNMKHKTELM--DFLSRHLL 741
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 122/286 (42%), Gaps = 34/286 (11%)
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG- 289
+S ++G+ E L L M +R + L C R++ K+IH+ +LKNG
Sbjct: 40 VSSLSKSGEIREALSLLTEMDFRKLRIGPEIYGEILQGCVYERDLCTGKQIHARILKNGD 99
Query: 290 -LISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHF 348
N ++ + +V Y KC+ +E + F
Sbjct: 100 FYAKNEYIETKLVIFYAKCDAFEASEVL-------------------------------F 128
Query: 349 DSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAAL 408
L +NV W A+ + CE E + E + D ++ + AC
Sbjct: 129 SKLRVRNVYSWAAIIGVKCRIGLCEEALMGFVEMLQNE-IFPDNFVVPNVCKACGALQWS 187
Query: 409 HPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACY 468
G+ +H Y+++ G+ + S+L DMY KCG + A +F ER++V +N ++ Y
Sbjct: 188 RFGRGVHGYVVKSGLHDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGY 247
Query: 469 AHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
+G E+AI L +M ++GI+P VT LSA + +E G++
Sbjct: 248 VQNGMNEEAIRLLSDMRKEGIEPTRVTVSTCLSASANMDGIEEGKQ 293
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 141/329 (42%), Gaps = 75/329 (22%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R+ NLK I+ + + + +Y+ + +++K+FD + +++ WNT
Sbjct: 385 RTQNLKLGKEVQCYCIRHSFASDIVLASTAVDMYANCGSIIDAKKVFDSVLAKDLILWNT 444
Query: 62 IISACIKSHDLKQARSLF-----DSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQS 116
++S +S +A LF +S P + +T+N ++ ++ G +A ++F +MQS
Sbjct: 445 LLSVYAESGLSGEAFRLFYEMQLESVP-PNAITWNLIILSFLR-NGQVNEAKEIFSQMQS 502
Query: 117 A---------------------------------DEHIRMDEFTVTSTLNLCVKLLNVGF 143
+ + +R + F++T L+ C L ++ F
Sbjct: 503 SGIFPNLVSWTTMMNGLVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACSNLASLHF 562
Query: 144 GRQLHAFMVKTSNDASGFAV-SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAAC 202
GR +H ++++ +S + +SL+DMY+KC +A VF
Sbjct: 563 GRSVHGYIIRNQQHSSSVLIETSLVDMYAKCGDINKAEMVF------------------- 603
Query: 203 CREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTF 262
R +D +N +IS Y NG+ +E + L R+ + G++ + TF
Sbjct: 604 --------------RSKLCSDLPLYNAMISAYALNGNVKEAIALCRRLEDTGIKPDNITF 649
Query: 263 ASALSACCGLRNVKCAKEIHS-WVLKNGL 290
S LSAC +V A EI + V K+G+
Sbjct: 650 TSLLSACNHAGDVSQAVEIFTDMVSKHGI 678
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 158/461 (34%), Positives = 252/461 (54%), Gaps = 2/461 (0%)
Query: 201 ACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEH 260
A + G++ AL+ F + P DA +NT+ GY++ A + ++ RM V N+
Sbjct: 63 AISKSGDLNYALEVFDKIPH-PDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKF 121
Query: 261 TFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLK 320
T+ + ACC ++ K+IH+ VLK G ++ F + ++ +Y +++ A +
Sbjct: 122 TYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNM 181
Query: 321 GVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLS 380
R+ S +S+I GYS G +++AR F+ + E+N V W A+ + YV++ F L
Sbjct: 182 PQRDVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFD 241
Query: 381 EFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC 440
+ E VV D + +L AC AL GK IH YI + G+++D KL +T++DMY KC
Sbjct: 242 R-MRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKC 300
Query: 441 GNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAIL 500
G + A +F ++ + +N MI A HG E AI LF+EM + + PD +TFV +L
Sbjct: 301 GCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVL 360
Query: 501 SAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEED 560
SA H G VE G+ YF MT + P +H+ CM+DL GRA LE+A + + +P D
Sbjct: 361 SACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPD 420
Query: 561 AVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQ 620
A +LG+ + CR++ N EL + +K++ LE +N RYV LAN+YA+ G W ++ ++RK
Sbjct: 421 AGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKL 480
Query: 621 MRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
M + G S + E + F G +HP+ IY+ L
Sbjct: 481 MNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKL 521
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 124/491 (25%), Positives = 216/491 (43%), Gaps = 76/491 (15%)
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
A KS DL A +FD PH D YN++ GY+ ++ +F+ + + + +
Sbjct: 63 AISKSGDLNYALEVFDKIPHPDAYIYNTIFRGYLR---WQLARNCIFMYSRMLHKSVSPN 119
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
+FT + C + G+Q+HA ++K A GF++++LI MY + E+A RVF+
Sbjct: 120 KFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFD 179
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
+ +++S +++ + G ++ A + F PE N +VSWN +I+ YVQ+ E
Sbjct: 180 NMPQR-DVVSWTSLITGYSQWGFVDKAREVFELMPERN-SVSWNAMIAAYVQSNRLHEAF 237
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
LF RM V ++ AS LSAC GL ++ K IH ++ K+G+ + +++ ++D+Y
Sbjct: 238 ALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMY 297
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
CKC G +E+A F+ L +K + W +
Sbjct: 298 CKC-------------------------------GCLEKASEVFNELPQKGISSWNCMIG 326
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR-MGV 423
G EA +L E + +E V D + V +L ACA + GK Y+ +G+
Sbjct: 327 GLAMHGKGEAAIELFKE-MEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGL 385
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
+ + +VD+ + G + E+A L E
Sbjct: 386 KPGMEHFGCMVDLLGRAGLL-------------------------------EEARKLINE 414
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE-TDHYACMIDLYGRA 542
M + PDA A++ A R G+ E+GE+ + ++ P + Y + +LY A
Sbjct: 415 M---PVNPDAGVLGALVGACRIHGNTELGEQIGKKVI---ELEPHNSGRYVLLANLYASA 468
Query: 543 NQLEKAIEFMK 553
+ E + K
Sbjct: 469 GRWEDVAKVRK 479
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 129/250 (51%), Gaps = 7/250 (2%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
++E H +K G + N LIH+Y L ++R++FD MP+R+V SW ++I+
Sbjct: 136 IEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITG 195
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
+ + +AR +F+ P ++ V++N+M+ Y+ + +A LF M+ E++ +D+
Sbjct: 196 YSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLH-EAFALFDRMRL--ENVVLDK 252
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
F S L+ C L + G+ +H ++ K+ + +++IDMY KC C E+A VF
Sbjct: 253 FVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNE 312
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFW---RQPELNDAVSWNTLISGYVQNGDAEE 242
++ + S N M+ G+ E A++ F R+ D +++ ++S +G EE
Sbjct: 313 LPQK-GISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEE 371
Query: 243 GLKLFVRMGE 252
G F M E
Sbjct: 372 GKHYFQYMTE 381
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 181/587 (30%), Positives = 285/587 (48%), Gaps = 35/587 (5%)
Query: 75 ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNL 134
A+++F+ P +L +N+++ GY ++ L + S E ++FT
Sbjct: 125 AKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEF--PNKFTFPFLFKA 182
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
+L + G LH ++K S + F ++SLI+ Y + A RVF N+
Sbjct: 183 ASRLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVF------TNMPG 236
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
K D VSWN +I+ + G ++ L LF M
Sbjct: 237 K---------------------------DVVSWNAMINAFALGGLPDKALLLFQEMEMKD 269
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
V+ N T S LSAC +++ + I S++ NG + +++ ++D+Y KC +N A+
Sbjct: 270 VKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDAK 329
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEA 374
+ ++ S ++M+ G++ GN +EA FD++ K W AL S Y +
Sbjct: 330 DLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRV 389
Query: 375 LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLV 434
L E + D + L+ L A A A+ G IH YI + + ++ L ++L+
Sbjct: 390 ALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATSLL 449
Query: 435 DMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAV 494
DMY+KCGN+ A +F +D+ +++ MI A +G + A+ LF MLE IKP+AV
Sbjct: 450 DMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKPNAV 509
Query: 495 TFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKS 554
TF IL A H G V GE+ F M Y I P+ HY C++D++GRA LEKA F++
Sbjct: 510 TFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASFIEK 569
Query: 555 IPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEM 614
+P A + G+ L C + N ELA A + LL LE N +V L+N+YA G+W ++
Sbjct: 570 MPIPPTAAVWGALLGACSRHGNVELAELAYQNLLELEPCNHGAFVLLSNIYAKAGDWEKV 629
Query: 615 GRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+RK MR + CS + V +H F VGD SHP + IYS L
Sbjct: 630 SNLRKLMRDSDVKKEPWCSSIDVNGIVHEFLVGDNSHPFSQKIYSKL 676
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 117/494 (23%), Positives = 206/494 (41%), Gaps = 53/494 (10%)
Query: 11 ICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSH 70
+ H IKA L+ N LI+ Y + ++F MP ++V SWN +I+A
Sbjct: 194 VLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINA----- 248
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
G AL LF EM+ D ++ + T+ S
Sbjct: 249 ---------------------------FALGGLPDKALLLFQEMEMKD--VKPNVITMVS 279
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L+ C K +++ FGR + +++ ++++DMY KC C +A +F +E+
Sbjct: 280 VLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEK- 338
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
+++S M+ + G + A F P A +WN LIS Y QNG L LF M
Sbjct: 339 DIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTA-AWNALISAYEQNGKPRVALSLFHEM 397
Query: 251 G-ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
+ +E T AL A L + IH ++ K+ + N +++ ++D+Y KC N
Sbjct: 398 QLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGN 457
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE----KNVVVWTALFSG 365
+N A + ++ + S+MI ++ G + A F S+ E N V +T +
Sbjct: 458 LNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCA 517
Query: 366 YVKA---QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
A E LF+ + + + +V + G L ++ ++I +M
Sbjct: 518 CNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLL------EKAASFIEKMP 571
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIA---CYAHHGHEEKAIL 479
+ + L+ S+ GN+ AE+ +QN +E + + + YA G EK
Sbjct: 572 IPPTAAVWGALLGACSRHGNVELAELAYQNLLELEPCNHGAFVLLSNIYAKAGDWEKVSN 631
Query: 480 LFEEMLEKGIKPDA 493
L + M + +K +
Sbjct: 632 LRKLMRDSDVKKEP 645
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 125/293 (42%), Gaps = 35/293 (11%)
Query: 279 KEIHSWVLKNGLISNPFVSSGIVDVYC--KCENMNYAESMLLLKGVRNSFSISSMIVGYS 336
K+IH+ +L+ +P+ +S ++ Y C + YA+++
Sbjct: 89 KQIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNV-------------------- 128
Query: 337 LQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILV 396
F+ + + N+ W L GY + + F + + +
Sbjct: 129 -----------FNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFP 177
Query: 397 ILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER 456
L A + LH G +H +++ + D ++++L++ Y G A +F N +
Sbjct: 178 FLFKAASRLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGK 237
Query: 457 DLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYF 516
D+V +N MI +A G +KA+LLF+EM K +KP+ +T V++LSA +E G ++
Sbjct: 238 DVVSWNAMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFG-RWI 296
Query: 517 NSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLN 569
S + + M+D+Y + + A + + +E+D V + L+
Sbjct: 297 CSYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKM-SEKDIVSWTTMLD 348
>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 205/724 (28%), Positives = 334/724 (46%), Gaps = 143/724 (19%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + IK G + L+ +Y + + L ++ K FD MP R+V +W++I+ +++
Sbjct: 123 HGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQN--- 179
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
G ++ L +F +M S E + D T+ S
Sbjct: 180 -----------------------------GQASEGLDMFSQMIS--EAVEPDSVTMLSVT 208
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK---------------CR--- 174
C +L ++ GR +H ++V+ +++ +SLI MY K CR
Sbjct: 209 EACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTA 268
Query: 175 -------------CYEEACRVFEGCTE---EVNLISKNAMVAACCREGEMEMALKTFW-- 216
C++EA VF E E N ++ ++ AC R G ++
Sbjct: 269 PWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFV 328
Query: 217 ----RQPELN-----------------------------DAVSWNTLISGYVQNGDAEEG 243
PEL+ +SWNTLIS + +NG EE
Sbjct: 329 IRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEA 388
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
L LFV+M G+ + ++ AS+LSAC + + +IH +++K G N FV + ++D+
Sbjct: 389 LLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNF-NDFVQNALIDM 447
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y KC G + A + F+ + EK++V W ++
Sbjct: 448 YAKC-------------------------------GFVHSANKMFEKIKEKSLVTWNSMI 476
Query: 364 SGYVK-AQNCEA--LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
G+ + + EA LFD + K D L + ++ AC+ L GK +H ++
Sbjct: 477 CGFSQNGYSVEAITLFDQMYMNCVK----MDKLTFLSVIQACSHLGYLEKGKWVHHKLIM 532
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
G++ D L + L DMYSKCG + A +F ER +V ++VMIA Y HG I L
Sbjct: 533 YGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISL 592
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
F +ML GIKP+ +TF+ ILSA H G+VE G+ YFNSM+ ++ + P+ DH+ACM+DL
Sbjct: 593 FNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMS-EFGVEPKHDHFACMVDLLS 651
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQ 600
RA L A + + S+P ++ I G+ LN CR+++ ++ E+ LL ++ + Y
Sbjct: 652 RAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTL 711
Query: 601 LANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSV 660
L+N+YA EG W + G++R M+ + G S + ++ +I+ F GD SH +T IY
Sbjct: 712 LSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPGDTSHSQTKDIYRF 771
Query: 661 LAIF 664
L F
Sbjct: 772 LENF 775
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 119/547 (21%), Positives = 233/547 (42%), Gaps = 107/547 (19%)
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
+ ++ +FD+ P D + ++ Y+ G+ +A+ L+ EM D+ ++ F S
Sbjct: 49 FESSKRVFDTFPKPDSFMWGVLIKCYVWG-GFFEEAVSLYHEMVYQDQ-TQISNFVFPSV 106
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L C ++ G ++H ++K ++ +SL+ MY + C ++AC+ F+
Sbjct: 107 LKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFD------- 159
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
M ++ D V+W++++ +VQNG A EGL +F +M
Sbjct: 160 -----------------TMPIR---------DVVAWSSIVLNFVQNGQASEGLDMFSQMI 193
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
V + T S AC L +++ + +H +V++ + SN +++ ++ +Y K ++
Sbjct: 194 SEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLY 253
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT----EKNVVVWTALFS--- 364
AE + R + + MI Y+ G +EA F + E N V +
Sbjct: 254 SAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACA 313
Query: 365 --GYVKA----------------------------------QNCEALFDLLSE------- 381
G VK ++C +F+ + E
Sbjct: 314 RLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWN 373
Query: 382 ----FVTKEGVVTDALILVILLGA----------------CALQAALHPGKEIHAYILRM 421
T+ G +AL+L + + C + G +IH YI++
Sbjct: 374 TLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKT 433
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
G + + + L+DMY+KCG + A +F+ E+ LV +N MI ++ +G+ +AI LF
Sbjct: 434 G-NFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLF 492
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGR 541
++M +K D +TF++++ A H G +E G K+ + Y + ++ + D+Y +
Sbjct: 493 DQMYMNCVKMDKLTFLSVIQACSHLGYLEKG-KWVHHKLIMYGLRKDSYLDTALTDMYSK 551
Query: 542 ANQLEKA 548
+L+ A
Sbjct: 552 CGELQMA 558
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 105/445 (23%), Positives = 194/445 (43%), Gaps = 75/445 (16%)
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
QLHA + T A + LI+ Y++ +E + RVF+
Sbjct: 19 QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFD--------------------- 57
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM-GENGVRWNEHTFAS 264
TF + D+ W LI YV G EE + L+ M ++ + + F S
Sbjct: 58 --------TFPKP----DSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPS 105
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
L AC G ++ ++H V+K G F S +V+
Sbjct: 106 VLKACSGFGDLSVGGKVHGRVIKCG-----FESDAVVE---------------------- 138
Query: 325 SFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVT 384
+S++ Y +++A + FD++ ++VV W+++ +V+ D+ S+ ++
Sbjct: 139 ----TSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMIS 194
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
E V D++ ++ + AC+ +L G+ +H Y++R ++ + L ++L+ MY K G++
Sbjct: 195 -EAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLY 253
Query: 445 YAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR 504
AE +F+N R + MI+CY G ++A+ +F +M E ++P+ VT V +L A
Sbjct: 254 SAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACA 313
Query: 505 HCGSVEMGEKYFNSMTADYKISPETDHYA-CMIDLYGRANQLEKAIEFMKSIPTEEDAVI 563
G V+ G + + + PE D +++LY L + ++I ++ I
Sbjct: 314 RLGRVKEG-RSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETI---KEKTI 369
Query: 564 LGSFLNVCRLNRNAELAGEAEEKLL 588
L + RN G+ EE LL
Sbjct: 370 LSWNTLISIFTRN----GQPEEALL 390
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 78/170 (45%), Gaps = 9/170 (5%)
Query: 393 LILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQN 452
++ + L CA L ++HA++ G+ + L++ Y++ G ++ +F
Sbjct: 2 ILYMPLFRRCATSTTL---TQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDT 58
Query: 453 FIERDLVLYNVMIACYAHHGHEEKAILLFEEML-EKGIKPDAVTFVAILSAFRHCGSVEM 511
F + D ++ V+I CY G E+A+ L+ EM+ + + F ++L A G + +
Sbjct: 59 FPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSV 118
Query: 512 GEKYFNSMTADYKISPETDHY--ACMIDLYGRANQLEKAIEFMKSIPTEE 559
G K + K E+D ++ +YG + L+ A + ++P +
Sbjct: 119 GGKVHGRVI---KCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRD 165
>gi|224120114|ref|XP_002318245.1| predicted protein [Populus trichocarpa]
gi|222858918|gb|EEE96465.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 170/547 (31%), Positives = 276/547 (50%), Gaps = 69/547 (12%)
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
D FT + L C K + +G GRQ+H ++K + + +SL+ YS C+ + +A RVF
Sbjct: 33 DMFTFPAVLKSCAKFVGIGEGRQVHGVIIKMGFVCNIYVENSLVHFYSVCKRFGDASRVF 92
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
+ EM ++ D VSW +ISGYV+ G +E
Sbjct: 93 D------------------------EMLVR---------DVVSWTGVISGYVRAGLFDEA 119
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
+ LF+RM V N TF S L AC + K IH K+ VS+ ++D+
Sbjct: 120 VGLFLRMD---VEPNAATFVSVLVACGRKGYLSVGKGIHGLSFKSAFGVGLEVSNALMDM 176
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y KC G + A++ FD L EK++V WT++
Sbjct: 177 YVKC-------------------------------GCLPGAKQVFDELAEKDIVSWTSII 205
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
SG V+ + +L + + G+ D +IL +L ACA AL G+ +H +I R +
Sbjct: 206 SGLVQCNCPKEALELFQD-MQSSGIEPDGIILTSVLSACARLGALDYGRWVHEHIDRKAI 264
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
+ D ++ + +VDMY+KCG + + IF ++++ +N ++ A HGH K + LFEE
Sbjct: 265 KWDIQIGTAMVDMYAKCGCIEMSMQIFNGMPHKNVLTWNALLNGLAMHGHAYKVLELFEE 324
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTA-DYKISPETDHYACMIDLYGRA 542
M+ G++P+ VTF+AIL+A HCG V G +YFN M Y + P +HY CM+DL RA
Sbjct: 325 MVRVGMRPNEVTFLAILTACCHCGLVNEGRQYFNWMKGQQYNLPPRLEHYGCMVDLLCRA 384
Query: 543 NQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLA 602
L++A+E K++P D I+G+ L+ C+ N N EL E ++ + L+ ++ YV L+
Sbjct: 385 RLLDEALELTKAMPMSPDVRIMGALLSACKENGNTELPQEILDRFVELDSHDSGVYVLLS 444
Query: 603 NVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLA 662
N++A W ++ RIR+ M+ + G + + ++ + H F VGD HP+ I +L
Sbjct: 445 NIHAINQRWDDVTRIRRLMKEKGIKKPPGSTVIELDGKAHEFIVGDTRHPQDKRIRLLLK 504
Query: 663 IFTGELY 669
I + +++
Sbjct: 505 ILSDQIF 511
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 165/365 (45%), Gaps = 37/365 (10%)
Query: 226 SWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWV 285
+N L+SGY + ++ R+ ++G + TF + L +C + +++H +
Sbjct: 1 PFNALVSGYAIGDRPKTAFLVYRRIVKDGFLPDMFTFPAVLKSCAKFVGIGEGRQVHGVI 60
Query: 286 LKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEAR 345
+K G + N +V + +V Y C+ +A
Sbjct: 61 IKMGFVCNIYVENSLVHFYSVCKRFG-------------------------------DAS 89
Query: 346 RHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQ 405
R FD + ++VV WT + SGYV+A LFD + V +A V +L AC +
Sbjct: 90 RVFDEMLVRDVVSWTGVISGYVRA----GLFDEAVGLFLRMDVEPNAATFVSVLVACGRK 145
Query: 406 AALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMI 465
L GK IH + + ++ + L+DMY KCG + A+ +F E+D+V + +I
Sbjct: 146 GYLSVGKGIHGLSFKSAFGVGLEVSNALMDMYVKCGCLPGAKQVFDELAEKDIVSWTSII 205
Query: 466 ACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKI 525
+ ++A+ LF++M GI+PD + ++LSA G+++ G ++ + I
Sbjct: 206 SGLVQCNCPKEALELFQDMQSSGIEPDGIILTSVLSACARLGALDYG-RWVHEHIDRKAI 264
Query: 526 SPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEE 585
+ M+D+Y + +E +++ +P ++ + + LN ++ +A E E
Sbjct: 265 KWDIQIGTAMVDMYAKCGCIEMSMQIFNGMP-HKNVLTWNALLNGLAMHGHAYKVLELFE 323
Query: 586 KLLRL 590
+++R+
Sbjct: 324 EMVRV 328
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 100/493 (20%), Positives = 192/493 (38%), Gaps = 109/493 (22%)
Query: 4 LNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
+ + E H IK G N L+H YS ++ ++FDEM R
Sbjct: 48 VGIGEGRQVHGVIIKMGFVCNIYVENSLVHFYSVCKRFGDASRVFDEMLVR--------- 98
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
D+V++ ++ GY+ A G +A+ LF+ M +
Sbjct: 99 ----------------------DVVSWTGVISGYVRA-GLFDEAVGLFLRMD-----VEP 130
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
+ T S L C + + G+ +H K++ ++L+DMY KC C A +VF
Sbjct: 131 NAATFVSVLVACGRKGYLSVGKGIHGLSFKSAFGVGLEVSNALMDMYVKCGCLPGAKQVF 190
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
+ E+ D VSW ++ISG VQ +E
Sbjct: 191 DELAEK---------------------------------DIVSWTSIISGLVQCNCPKEA 217
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
L+LF M +G+ + S LSAC L + + +H + + + + + + +VD+
Sbjct: 218 LELFQDMQSSGIEPDGIILTSVLSACARLGALDYGRWVHEHIDRKAIKWDIQIGTAMVDM 277
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y KC G +E + + F+ + KNV+ W AL
Sbjct: 278 YAKC-------------------------------GCIEMSMQIFNGMPHKNVLTWNALL 306
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
+G + + +L E V + G+ + + + +L AC ++ G++ ++
Sbjct: 307 NGLAMHGHAYKVLELFEEMV-RVGMRPNEVTFLAILTACCHCGLVNEGRQYFNWMKGQQY 365
Query: 424 QMDKKL--ISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
+ +L +VD+ + + A E+ + D+ + +++ +G+ E L
Sbjct: 366 NLPPRLEHYGCMVDLLCRARLLDEALELTKAMPMSPDVRIMGALLSACKENGNTE----L 421
Query: 481 FEEMLEKGIKPDA 493
+E+L++ ++ D+
Sbjct: 422 PQEILDRFVELDS 434
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 160/460 (34%), Positives = 251/460 (54%), Gaps = 1/460 (0%)
Query: 199 VAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWN 258
VA+ C K ++ + ++ WNT + + + + + LF R+ E + +
Sbjct: 53 VASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPD 112
Query: 259 EHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLL 318
+T + L AC L +V+ K +H +V K GL SN F+ + IV +Y C + A +
Sbjct: 113 HYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFD 172
Query: 319 LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDL 378
R+ + + MI G+ E A + F + E+NV WT++ GY + + DL
Sbjct: 173 KMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDL 232
Query: 379 LSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYS 438
E + G++ + + +V +L ACA L G+ IH + R G + + ++ +TL+DMY
Sbjct: 233 FLE-MEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYV 291
Query: 439 KCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVA 498
KCG + A IF N ER +V ++ MIA A HG E A+ LF +M+ G+KP+AVTF+
Sbjct: 292 KCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIG 351
Query: 499 ILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE 558
IL A H G VE G KYF SMT DY I P +HY CM+DL+ RA L++A EF+ ++P
Sbjct: 352 ILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIA 411
Query: 559 EDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIR 618
+ V+ G+ L C++++N +LA EA L +L+ N YV L+N+YA G W ++ R+R
Sbjct: 412 PNGVVWGALLGGCKVHKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVR 471
Query: 619 KQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
K MR + G S + VE ++ F GD +HP+T I+
Sbjct: 472 KLMRDRGVKKTPGWSSIMVEGVVYNFVAGDDTHPQTEEIF 511
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 180/377 (47%), Gaps = 41/377 (10%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R L+++ I H K GL N ++H+Y+ + +RK+FD+MP+R+V +WN
Sbjct: 125 RLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNI 184
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I+ +K D + A LF P +++ ++ SM+ GY G +A+ LF+EM+ D +
Sbjct: 185 MIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQC-GKSKEAIDLFLEME--DAGL 241
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+E TV + L C + N+ GR++H F ++ + + ++LIDMY KC C E+ACR
Sbjct: 242 LPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACR 301
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F+ EE ++S +AM+A G +G AE
Sbjct: 302 IFDN-MEERTVVSWSAMIA--------------------------------GLAAHGRAE 328
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKN-GLISNPFVSSGI 300
+ L LF +M GV+ N TF L AC + V+ ++ + + ++ G++ +
Sbjct: 329 DALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCM 388
Query: 301 VDVYCKCENMNYAESMLL-LKGVRNSFSISSMIVGYSLQGNM---EEARRHFDSLTEKNV 356
VD++ + + A ++ + N +++ G + N+ EEA RH L N
Sbjct: 389 VDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSKLDPLND 448
Query: 357 VVWTALFSGYVKAQNCE 373
+ L + Y +A E
Sbjct: 449 GYYVVLSNIYAEAGRWE 465
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 112/426 (26%), Positives = 199/426 (46%), Gaps = 47/426 (11%)
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEG-YEADALKLFIEMQSADEH 120
+ S C + A+ +F ++ +N+ L + AEG ADA+ LF ++ D
Sbjct: 53 VASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSF--AEGDSPADAISLFYRLREFD-- 108
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
I D +T + L C +LL+V G+ +H ++ K ++ F + ++ +Y+ C A
Sbjct: 109 ISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVAR 168
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+VF+ + ++I+ N M+A + G+ E A K F PE N SW ++I GY Q G +
Sbjct: 169 KVFDKMPQR-DVITWNIMIARLVKMGDAEGAYKLFAEMPERN-VRSWTSMIGGYAQCGKS 226
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
+E + LF+ M + G+ NE T + L AC + N+ + IH + ++G N V + +
Sbjct: 227 KEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTL 286
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
+D+Y KC G +E+A R FD++ E+ VV W+
Sbjct: 287 IDMYVKC-------------------------------GCLEDACRIFDNMEERTVVSWS 315
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
A+ +G E L ++ + GV +A+ + +L AC+ + G++ A + R
Sbjct: 316 AMIAGLAAHGRAEDALALFNKMINT-GVKPNAVTFIGILHACSHMGMVEKGRKYFASMTR 374
Query: 421 -MGVQMDKKLISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMI-ACYAHHGHEEKA 477
G+ + +VD++S+ G + A E I I + V++ ++ C H K
Sbjct: 375 DYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVH-----KN 429
Query: 478 ILLFEE 483
I L EE
Sbjct: 430 IKLAEE 435
Score = 39.3 bits (90), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 44/91 (48%)
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
K++HA++L+ + +S + + + + +YA++IFQ ++ +N + +A
Sbjct: 32 KQLHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFAEG 91
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
AI LF + E I PD T +L A
Sbjct: 92 DSPADAISLFYRLREFDISPDHYTCSFVLKA 122
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 186/662 (28%), Positives = 315/662 (47%), Gaps = 72/662 (10%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFS----WN 60
++KEA Q + GL + IT ++ S L +++ ++ S
Sbjct: 138 HVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGT 197
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
++S +K + AR +FD +D+ T+N M+ GY + +E A +LF MQ
Sbjct: 198 ALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWE-KAFELFYRMQQVG-- 254
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
++ ++ + S L+ C + +G+ +HA + +SLI MY+ C E A
Sbjct: 255 LKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGAR 314
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
RVF+ ++ D VSW +I GY +NG+
Sbjct: 315 RVFDNM---------------------------------KVRDVVSWTVMIEGYAENGNI 341
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
E+ LF M E G++ + T+ ++AC N+ A+EIHS V G ++ VS+ +
Sbjct: 342 EDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTAL 401
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
V +Y KC G +++AR+ FD++ ++VV W+
Sbjct: 402 VHMYAKC-------------------------------GAIKDARQVFDAMPRRDVVSWS 430
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
A+ YV+ F+ + + + D + + LL AC AL G EI+ ++
Sbjct: 431 AMIGAYVENGYGTEAFETF-HLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIK 489
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
+ L + L+ M +K G++ A IF + RD++ +N MI Y+ HG+ +A+ L
Sbjct: 490 ADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYL 549
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
F+ ML++ +P++VTFV +LSA G V+ G ++F + I P Y CM+DL G
Sbjct: 550 FDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLG 609
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQ 600
RA +L++A +KS+P + + I S L CR++ N ++A A E+ L ++ + A YVQ
Sbjct: 610 RAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAERCLMIDPYDGAVYVQ 669
Query: 601 LANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSV 660
L+++YAA G W + ++RK M + GC+W+ V ++H F V D SHP IY+
Sbjct: 670 LSHMYAAAGMWENVAKVRKVMESRGIRKEQGCTWIEVAGKVHTFVVEDRSHPLVGEIYAE 729
Query: 661 LA 662
LA
Sbjct: 730 LA 731
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 124/470 (26%), Positives = 221/470 (47%), Gaps = 71/470 (15%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
N++ NT+I ++ +AR +FDS +K +VT+N+++ GY G+ +A LF +M
Sbjct: 91 NIYELNTLIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQV-GHVKEAFALFRQM 149
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV-SSLIDMYSKC 173
DE + T S L+ C + +G+++HA +V T+ S F + ++L+ MY K
Sbjct: 150 --VDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVV-TAGFVSDFRIGTALVSMYVKG 206
Query: 174 RCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISG 233
++A +VF+G ++ + N MV + G+ E A
Sbjct: 207 GSMDDARQVFDGLHIR-DVSTFNVMVGGYAKSGDWEKA---------------------- 243
Query: 234 YVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISN 293
+LF RM + G++ N+ +F S L C + K +H+ + GL+ +
Sbjct: 244 ----------FELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDD 293
Query: 294 PFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
V++ ++ +Y C ++ A + VR+ S + MI GY+ GN+E+A F ++ E
Sbjct: 294 IRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQE 353
Query: 354 KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
EG+ D + + ++ ACA+ A L+ +E
Sbjct: 354 --------------------------------EGIQPDRITYMHIMNACAISANLNHARE 381
Query: 414 IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH 473
IH+ + G D + + LV MY+KCG + A +F RD+V ++ MI Y +G+
Sbjct: 382 IHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGY 441
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMG-EKYFNSMTAD 522
+A F M I+PD VT++ +L+A H G++++G E Y ++ AD
Sbjct: 442 GTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKAD 491
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/489 (23%), Positives = 204/489 (41%), Gaps = 112/489 (22%)
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
+D T C +L + G+Q+ +++ + + +++LI +YS C EA ++
Sbjct: 55 IDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQI 114
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
F+ E V+WN LI+GY Q G +E
Sbjct: 115 FDSV---------------------------------ENKTVVTWNALIAGYAQVGHVKE 141
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
LF +M + G+ + TF S L AC + KE+H+ V+ G +S+ + + +V
Sbjct: 142 AFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVS 201
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
+Y K G+M++AR+ FD L ++V + +
Sbjct: 202 MYVK-------------------------------GGSMDDARQVFDGLHIRDVSTFNVM 230
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
GY K+ + E F+L + + G+ + + + +L C AL GK +HA + G
Sbjct: 231 VGGYAKSGDWEKAFELFYR-MQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAG 289
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
+ D ++ ++L+ MY+ CG++ A +F N RD+V + VMI YA +G+ E A LF
Sbjct: 290 LVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFA 349
Query: 483 EMLEKGIKPDAVTFVAILSA-----------------------------------FRHCG 507
M E+GI+PD +T++ I++A + CG
Sbjct: 350 TMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCG 409
Query: 508 SVEMGEKYFNSMTADYKISPETD--HYACMIDLY---GRANQLEKAIEFMKSIPTEEDAV 562
+++ + F++M P D ++ MI Y G + + MK E D V
Sbjct: 410 AIKDARQVFDAM-------PRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGV 462
Query: 563 ILGSFLNVC 571
+ LN C
Sbjct: 463 TYINLLNAC 471
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 157/377 (41%), Gaps = 75/377 (19%)
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
R+GE G + T+ C LR+ K++ +++ G N + + ++ +Y C
Sbjct: 47 RLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSIC- 105
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
GN+ EAR+ FDS+ K VV W AL +GY +
Sbjct: 106 ------------------------------GNVTEARQIFDSVENKTVVTWNALIAGYAQ 135
Query: 369 AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK 428
+ + F L + V EG+ + + +L AC+ A L+ GKE+HA ++ G D +
Sbjct: 136 VGHVKEAFALFRQMV-DEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFR 194
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
+ + LV MY K G+M A +F RD+ +NVM+ YA G EKA LF M + G
Sbjct: 195 IGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVG 254
Query: 489 IKPDAVTFVAILSA-----------------------------------FRHCGSVEMGE 513
+KP+ ++F++IL + CGS+E
Sbjct: 255 LKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGAR 314
Query: 514 KYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE---EDAVILGSFLNV 570
+ F++M +S + MI+ Y +E A ++ E D + +N
Sbjct: 315 RVFDNMKVRDVVS-----WTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNA 369
Query: 571 CRLNRNAELAGEAEEKL 587
C ++ N A E ++
Sbjct: 370 CAISANLNHAREIHSQV 386
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 148/346 (42%), Gaps = 69/346 (19%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTI 62
S NL A H Q AG + + L+H+Y+K ++++R++FD MP R+V SW+ +
Sbjct: 373 SANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAM 432
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
I A +++ GY +A + F M+ ++ I
Sbjct: 433 IGAYVEN--------------------------------GYGTEAFETFHLMKRSN--IE 458
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
D T + LN C L + G +++ +K + ++LI M +K E A +
Sbjct: 459 PDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYI 518
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
F+ ++ ++ + +WN +I GY +G+A E
Sbjct: 519 FD------TMVRRDVI---------------------------TWNAMIGGYSLHGNARE 545
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKN-GLISNPFVSSGIV 301
L LF RM + R N TF LSAC V + +++L+ G++ + +V
Sbjct: 546 ALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMV 605
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSI-SSMIVGYSLQGNMEEARR 346
D+ + ++ AE ++ V+ + SI SS++V + GN++ A R
Sbjct: 606 DLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAER 651
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 191/652 (29%), Positives = 316/652 (48%), Gaps = 104/652 (15%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R ++ ++ H A+K GL + L+ +YSK L E+R LFD E+NV SWN+
Sbjct: 311 RQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFD-TNEKNVISWNS 369
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I K D + A +L +MQ D+ +
Sbjct: 370 MIGGYSKDRDFR--------------------------------GAFELLRKMQMEDK-V 396
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASG-FAVSSLIDMYSKCRCYEEAC 180
+++E T+ + L +C + + +++H + ++ S ++ + Y+KC A
Sbjct: 397 KVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAE 456
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
VF C E ++S SWN LI G+VQNG
Sbjct: 457 GVF--CGMESKMVS-------------------------------SWNALIGGHVQNGFP 483
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
+ L L++ M +G+ + T AS LSAC L+++ C KEIH +L+NG + F+ +
Sbjct: 484 RKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISL 543
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
V +Y +C G + A+ FD++ EKN+V W
Sbjct: 544 VSLYVQC-------------------------------GKILLAKLFFDNMEEKNLVCWN 572
Query: 361 ALFSGYVKAQNCEALFDLLSEF--VTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
+ +G+ +QN E FD L F + + D + ++ LGAC+ +AL GKE+H +
Sbjct: 573 TMINGF--SQN-EFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFA 629
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
++ + + +L+DMY+KCG M ++ IF + V +NV+I Y HGH KAI
Sbjct: 630 VKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAI 689
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
LF+ M G +PD+VTF+A+L+A H G V G +Y M + + I P+ +HYAC++D+
Sbjct: 690 ELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDM 749
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARY 598
GRA +L +A+E + +P + D+ I S L+ CR R+ ++ + KLL L + Y
Sbjct: 750 LGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELGPDKAENY 809
Query: 599 VQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVS 650
V ++N YA G W E+ ++R++M+ + + AGCSW+ + ++ F VGD S
Sbjct: 810 VLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKVSRFLVGDES 861
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 138/538 (25%), Positives = 229/538 (42%), Gaps = 101/538 (18%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A+K + N LI +Y K + + K+FD+MP+RN+ SWN+++ AC+++
Sbjct: 219 HGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVF 278
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+++ LF G +N DE + D T+ + +
Sbjct: 279 EESYGLFK---------------GLLN-----------------GDEGLMPDVATMVTVI 306
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
LC + V G H +K SSL+DMYSKC EA +F+ T E N+
Sbjct: 307 PLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFD--TNEKNV 364
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG- 251
I SWN++I GY ++ D +L +M
Sbjct: 365 I--------------------------------SWNSMIGGYSKDRDFRGAFELLRKMQM 392
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI-SNPFVSSGIVDVYCKCENM 310
E+ V+ NE T + L C KEIH + L++G I S+ V++ V Y KC ++
Sbjct: 393 EDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSL 452
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
+YAE + F + K V W AL G+V+
Sbjct: 453 HYAEGV-------------------------------FCGMESKMVSSWNALIGGHVQNG 481
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
DL + G+ D + LL ACA +L GKEIH +LR G ++D+ +
Sbjct: 482 FPRKALDLYL-LMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFIC 540
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+LV +Y +CG + A++ F N E++LV +N MI ++ + A+ +F +ML I
Sbjct: 541 ISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIW 600
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
PD ++ + L A ++ +G K + ++ + +ID+Y + +E++
Sbjct: 601 PDEISIIGALGACSQVSALRLG-KELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQS 657
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 137/514 (26%), Positives = 234/514 (45%), Gaps = 79/514 (15%)
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
T+ S C +D + +F++S K+L +N++L GY+ + DA+ +F+EM S E
Sbjct: 137 TMYSICDSPYD---SCLVFNASRRKNLFLWNALLSGYLRNSLFR-DAVFVFVEMISLTEF 192
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
+ D FT+ + CV + +V G +H F +KT + F ++LI MY K
Sbjct: 193 VP-DNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKF------- 244
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
G +E A+K F + P+ N VSWN+++ ++NG
Sbjct: 245 -------------------------GFVESAVKVFDKMPQRN-LVSWNSVMYACLENGVF 278
Query: 241 EEGLKLFVRM--GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
EE LF + G+ G+ + T + + C V+ H LK GL V+S
Sbjct: 279 EESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNS 338
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
++D+Y KC G + EAR FD+ EKNV+
Sbjct: 339 SLLDMYSKC-------------------------------GYLCEARVLFDT-NEKNVIS 366
Query: 359 WTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
W ++ GY K ++ F+LL + ++ V + + L+ +L C + KEIH Y
Sbjct: 367 WNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYA 426
Query: 419 LRMG-VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
LR G +Q D+ + + V Y+KCG++ YAE +F + + +N +I + +G KA
Sbjct: 427 LRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKA 486
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC--M 535
+ L+ M G++PD T ++LSA S+ G++ SM + E D + C +
Sbjct: 487 LDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRN---GFELDEFICISL 543
Query: 536 IDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLN 569
+ LY + ++ A F ++ E++ V + +N
Sbjct: 544 VSLYVQCGKILLAKLFFDNM-EEKNLVCWNTMIN 576
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 122/269 (45%), Gaps = 47/269 (17%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
MR L+ L + A L +++ + IH ++LR +L DE F
Sbjct: 493 MRGSGLEPDLFTIASLLSACARLKSLSCGKEIH----GSMLRNGFEL-DE------FICI 541
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
+++S ++ + A+ FD+ K+LV +N+M+ G+ E + DAL +F +M S+
Sbjct: 542 SLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNE-FPFDALDMFHQMLSSK-- 598
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
I DE ++ L C ++ + G++LH F VK+ F SLIDMY+KC C E++
Sbjct: 599 IWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQ 658
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+F+ + L V+WN LI+GY +G
Sbjct: 659 NIFD---------------------------------RVHLKGEVTWNVLITGYGIHGHG 685
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSAC 269
+ ++LF M G R + TF + L+AC
Sbjct: 686 RKAIELFKSMQNAGFRPDSVTFIALLTAC 714
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 130/280 (46%), Gaps = 8/280 (2%)
Query: 328 ISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEG 387
I+ ++ YS+ + ++ F++ KN+ +W AL SGY++ + E ++
Sbjct: 132 ITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTE 191
Query: 388 VVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAE 447
V D L ++ AC + G+ +H + L+ V D + + L+ MY K G + A
Sbjct: 192 FVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAV 251
Query: 448 IIFQNFIERDLVLYN-VMIACYAHHGHEEKAILLFEEML--EKGIKPDAVTFVAILSAFR 504
+F +R+LV +N VM AC +G E++ LF+ +L ++G+ PD T V ++
Sbjct: 252 KVFDKMPQRNLVSWNSVMYACL-ENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCA 310
Query: 505 HCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVIL 564
G V +G F+ + + E + ++D+Y + L +A + E++ +
Sbjct: 311 RQGEVRLG-MVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDT--NEKNVISW 367
Query: 565 GSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANV 604
S + +R+ A E K +++E K V L NV
Sbjct: 368 NSMIGGYSKDRDFRGAFELLRK-MQMEDKVKVNEVTLLNV 406
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 3/165 (1%)
Query: 394 ILVILLGACALQAALHPGKEIHAYI-LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQN 452
++ +LL C + G++IH +I Q D LI+ LV MYS C + + ++F
Sbjct: 95 LIGLLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNA 154
Query: 453 FIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE-KGIKPDAVTFVAILSAFRHCGSVEM 511
++L L+N +++ Y + A+ +F EM+ PD T ++ A V +
Sbjct: 155 SRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRL 214
Query: 512 GEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIP 556
GE + K+ + +I +YG+ +E A++ +P
Sbjct: 215 GEA-VHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMP 258
>gi|147770185|emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
Length = 734
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 184/614 (29%), Positives = 291/614 (47%), Gaps = 99/614 (16%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLV 88
N L+ +Y + +K+FDEM +N+ SW +ISA K+ +L++A
Sbjct: 126 NCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKA------------- 172
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLH 148
++LF +MQ++ IR + S L C+ + G+Q+H
Sbjct: 173 -------------------IRLFSDMQASG--IRPNSAVYMSLLQSCLGPSFLELGKQMH 211
Query: 149 AFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEM 208
+ +++ +A+ +++ +MY +C E A VF+G
Sbjct: 212 SHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGM---------------------- 249
Query: 209 EMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSA 268
+ +AV+W L+ GY Q E L+LF RM GV +E F+ L
Sbjct: 250 -----------DAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKV 298
Query: 269 CCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSI 328
CC L + K+IHS ++K G S V + +VD Y KC
Sbjct: 299 CCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKC--------------------- 337
Query: 329 SSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGV 388
G++E A R F ++E N V W+AL SG+ ++ E + + + EGV
Sbjct: 338 ----------GDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRS-EGV 386
Query: 389 VTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEI 448
V ++ I + ACA QA L+ G + H ++ G+ S +V MYSKCG + YA
Sbjct: 387 VLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARR 446
Query: 449 IFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGS 508
F++ E D V + +I+ YA+HG+ +A+ F M G++P+AVTF+A+L+A H G
Sbjct: 447 AFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGL 506
Query: 509 VEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFL 568
V ++Y SM+ DY + P DHY CMID Y RA L +A+E + +P E DA+ S L
Sbjct: 507 VAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLXEALELINRMPFEPDAMSWKSLL 566
Query: 569 NVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNR 628
C + + +L A E L RL+ + A Y+ L N+Y+A G W E G +RK M + +
Sbjct: 567 GGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFGKWEEAGHVRKLMAERELKK 626
Query: 629 FAGCSWVYVEHEIH 642
CSW+ V+ ++H
Sbjct: 627 EVSCSWISVKGQVH 640
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/465 (23%), Positives = 199/465 (42%), Gaps = 69/465 (14%)
Query: 98 INAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSND 157
++ +G +A EM AD + + + C KL ++ GR +H + +T +
Sbjct: 62 LSKQGKLKEAHDFLKEMDDAD--VSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKN 119
Query: 158 ASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWR 217
SG + L+ MY C + +VF+ + NL+S +++A + GE+E A
Sbjct: 120 PSGSIENCLLRMYCDCGSXIDVQKVFDEMLMK-NLVSWVIVISAYAKNGELEKA------ 172
Query: 218 QPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKC 277
++LF M +G+R N + S L +C G ++
Sbjct: 173 --------------------------IRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLEL 206
Query: 278 AKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSL 337
K++HS V++ L +N V + I ++Y +C
Sbjct: 207 GKQMHSHVIRAQLNANITVETAICNMYVRC------------------------------ 236
Query: 338 QGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVI 397
G +E A+ FD + +N V WT L GY +A+ E +L + EGV D + I
Sbjct: 237 -GWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAM-EGVELDEFVFSI 294
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD 457
+L C GK+IH++I+++G + + + + LVD Y KCG++ A F E +
Sbjct: 295 VLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPN 354
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFN 517
V ++ +I+ ++ G E I +F + +G+ ++ + ++ A ++ MG +
Sbjct: 355 DVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHG 414
Query: 518 SMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAV 562
+S A M+ +Y + +L+ A +SI E DAV
Sbjct: 415 DAIKRGLVSYLYGESA-MVTMYSKCGRLDYARRAFESI-DEPDAV 457
>gi|224126355|ref|XP_002329533.1| predicted protein [Populus trichocarpa]
gi|222870242|gb|EEF07373.1| predicted protein [Populus trichocarpa]
Length = 693
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 214/704 (30%), Positives = 342/704 (48%), Gaps = 97/704 (13%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPERNVFS----WNTIISACIKSHDLKQARSLFDSSPH 84
+QL+ + S+ L +++R L D+ PER+ S W ++++ + + ++R LFD P
Sbjct: 3 SQLLCMLSQQKL-QQARNLLDKFPERSRHSRIAHWTSLLTKYSRIGFIDESRVLFDIMPE 61
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGF- 143
+++V+YN ML GY+ G ++A LF EM E V S ++ L + G
Sbjct: 62 RNIVSYNVMLSGYLQC-GRLSEARGLFEEMP---------ERNVVSWTSMLCGLADAGRI 111
Query: 144 --GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAA 201
R+L M + + + V+ LI K EEA RVF+ E+ N++S NAM+
Sbjct: 112 CEARELFKEMPERNVVSWNAMVAGLI----KNEDLEEARRVFDEIPEK-NVVSWNAMIKG 166
Query: 202 CCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE--------- 252
G+ME A + + + E + ++W T+I+GY + GD E F R+ E
Sbjct: 167 FAENGKMEEA-RVLFEEMEDRNVITWTTMIAGYCRIGDVREAYCFFCRIPERNVVSWTAM 225
Query: 253 -NGVRWNEH----------------------TFASALSACCGLRNVKCAKEIHSWVLKNG 289
+G WN + TF S AC G+R K++H+ ++ NG
Sbjct: 226 ISGFTWNGYYGEALLLFLEMKRRSNIAPNGETFISLAYACAGMRFHHLGKQLHAQLIING 285
Query: 290 LISNPF---VSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISS---MIVGYSLQGNMEE 343
L + ++ ++ +Y M+YA + NS ++ S MI GY+ G +E+
Sbjct: 286 LEYEDYDGRIAKSLIHMYSLFGAMDYAH--YVFNKNLNSHAVQSCNHMINGYTRIGQVEK 343
Query: 344 ARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKE---------GVVTDALI 394
AR FD++ ++ + WT++ GY N L K+ G+V + L
Sbjct: 344 ARELFDTIPARDNITWTSMIVGYFDIGNVSEACYLFENMPDKDSVAWTSMISGLVQNELF 403
Query: 395 L---------------------VILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL 433
L IL GA A L G+++H +++ D L ++L
Sbjct: 404 LKATSFLLRMLAHGAPPLSSTYAILFGAAGAIAHLDFGRQLHNMLMKTLSDCDLILSNSL 463
Query: 434 VDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDA 493
+ MY+KCG + A IF N I RDL+ +N MI AHH + + +FE ML+ G +P++
Sbjct: 464 ISMYAKCGEIHDAYSIFTNMIYRDLISWNTMIMGLAHHALANETLKVFETMLQSGTRPNS 523
Query: 494 VTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMK 553
VTF+ ILSA H G V G K F +M Y I P +HY MI+L GRA ++ +A E +
Sbjct: 524 VTFLGILSACSHAGLVSQGCKLFKAMRDVYAIQPGLEHYISMINLLGRAGKVREAEELIL 583
Query: 554 SIPTEEDAVILGSFLNVCRL-NRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWA 612
+P E + I G+ L VC + +NA++A A +LL L+ N +V L N+YAA G
Sbjct: 584 GLPFETNHAIWGALLGVCGVAEKNADIAQHAARRLLELDPLNAPAHVALCNIYAACGKHI 643
Query: 613 EMGRIRKQMRGMKGNR-FAGCSWVYVEHEIHIFTVGDVSHPKTN 655
E ++RK+M G+KG R GCSW+ + + +F GD P+ +
Sbjct: 644 EEQKLRKEM-GLKGVRKVPGCSWIVLNGNVCVFLSGDKLDPEAD 686
>gi|15227199|ref|NP_179827.1| protein slow growth 1 [Arabidopsis thaliana]
gi|75206347|sp|Q9SJZ3.1|PP169_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g22410, mitochondrial; Flags: Precursor
gi|4544450|gb|AAD22358.1| hypothetical protein [Arabidopsis thaliana]
gi|18086349|gb|AAL57637.1| At2g22410/F14M13.19 [Arabidopsis thaliana]
gi|309260071|gb|ADO62711.1| SLOW GROWTH1 [Arabidopsis thaliana]
gi|330252206|gb|AEC07300.1| protein slow growth 1 [Arabidopsis thaliana]
Length = 681
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 197/667 (29%), Positives = 319/667 (47%), Gaps = 74/667 (11%)
Query: 3 SLNLKEALICHVQAIKA-----GLTLTTITTNQLIHI--YSKHNLLRESRKLFDEMPERN 55
SL K L+ H++ I+A GL L +++LI S+ L S K+ + N
Sbjct: 58 SLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPN 117
Query: 56 VFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQ 115
+FSWN I +S + P + + Y ML +
Sbjct: 118 IFSWNVTIRGFSESEN-----------PKESFLLYKQML--------------------R 146
Query: 116 SADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRC 175
R D FT +C L G + ++K + ++ I M++ C
Sbjct: 147 HGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASC-- 204
Query: 176 YEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYV 235
G+ME A K F P + D VSWN LI+GY
Sbjct: 205 ------------------------------GDMENARKVFDESP-VRDLVSWNCLINGYK 233
Query: 236 QNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL-ISNP 294
+ G+AE+ + ++ M GV+ ++ T +S+C L ++ KE + +V +NGL ++ P
Sbjct: 234 KIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIP 293
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
V++ ++D++ KC +++ A + R S ++MI GY+ G ++ +R+ FD + EK
Sbjct: 294 LVNA-LMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEK 352
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
+VV+W A+ G V+A+ + L E T D + ++ L AC+ AL G I
Sbjct: 353 DVVLWNAMIGGSVQAKRGQDALALFQEMQTSN-TKPDEITMIHCLSACSQLGALDVGIWI 411
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
H YI + + ++ L ++LVDMY+KCGN++ A +F R+ + Y +I A HG
Sbjct: 412 HRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDA 471
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC 534
AI F EM++ GI PD +TF+ +LSA H G ++ G YF+ M + + ++P+ HY+
Sbjct: 472 STAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSI 531
Query: 535 MIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNN 594
M+DL GRA LE+A M+S+P E DA + G+ L CR++ N EL +A +KLL L+ ++
Sbjct: 532 MVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSD 591
Query: 595 KARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKT 654
YV L +Y W + R R+ M + GCS + V + F V D S P++
Sbjct: 592 SGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPES 651
Query: 655 NAIYSVL 661
IY L
Sbjct: 652 EKIYDRL 658
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 130/549 (23%), Positives = 232/549 (42%), Gaps = 107/549 (19%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
+R +L ++ HV +K L L + N IH+++ + +RK+FDE P R++ SWN
Sbjct: 169 LRLSSLGHMILGHV--LKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWN 226
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
+I+ GY G A+ ++ M+S E
Sbjct: 227 CLIN-------------------------------GYKKI-GEAEKAIYVYKLMES--EG 252
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
++ D+ T+ ++ C L ++ G++ + ++ + + V++L+DM+SKC EA
Sbjct: 253 VKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEAR 312
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
R+F+ E+ ++S M++ R G ++++ K F E D V WN +I G VQ
Sbjct: 313 RIFDN-LEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEE-KDVVLWNAMIGGSVQAKRG 370
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
++ L LF M + + +E T LSAC L + IH ++ K L N + + +
Sbjct: 371 QDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSL 430
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
VD+Y KC N++ A S+ RNS + +++I G +L G+ A +F+ + +
Sbjct: 431 VDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDA------ 484
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
G+ D + + LL AC + G++ Y +
Sbjct: 485 --------------------------GIAPDEITFIGLLSACCHGGMIQTGRD---YFSQ 515
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
M + + + L Y++M+ G E+A L
Sbjct: 516 MKSRFN---------------------------LNPQLKHYSIMVDLLGRAGLLEEADRL 548
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID-LY 539
E M ++ DA + A+L R G+VE+GEK + ++ P ++D +Y
Sbjct: 549 MESM---PMEADAAVWGALLFGCRMHGNVELGEKAAKKL---LELDPSDSGIYVLLDGMY 602
Query: 540 GRANQLEKA 548
G AN E A
Sbjct: 603 GEANMWEDA 611
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 125/276 (45%), Gaps = 45/276 (16%)
Query: 252 ENGVRWNE-HTFA------SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
+ + WN H+F S L C L ++K +I + ++ NGLI +PF SS ++ +
Sbjct: 39 DKPINWNSTHSFVLHNPLLSLLEKCKLLLHLK---QIQAQMIINGLILDPFASSRLI-AF 94
Query: 305 CKCENMNYAE-SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
C Y + S+ +LKG+ N N+ W
Sbjct: 95 CALSESRYLDYSVKILKGIENP-----------------------------NIFSWNVTI 125
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVV---TDALILVILLGACALQAALHPGKEIHAYILR 420
G+ +++N + F LL + + + G D +L CA G I ++L+
Sbjct: 126 RGFSESENPKESF-LLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLK 184
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
+ +++ + + + M++ CG+M A +F RDLV +N +I Y G EKAI +
Sbjct: 185 LRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYV 244
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYF 516
++ M +G+KPD VT + ++S+ G + G++++
Sbjct: 245 YKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFY 280
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 103/259 (39%), Gaps = 19/259 (7%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIY-SKHNLLRESRKLFDEMPERNVFSW 59
M++ N K I + + A L + IH Y K++L NV
Sbjct: 380 MQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSL------------SLNVALG 427
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
+++ K ++ +A S+F ++ +TY +++ G + G + A+ F EM D
Sbjct: 428 TSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGG-LALHGDASTAISYFNEM--IDA 484
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSN-DASGFAVSSLIDMYSKCRCYEE 178
I DE T L+ C + GR + M N + S ++D+ + EE
Sbjct: 485 GIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEE 544
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSW-NTLISGYVQN 237
A R+ E E + A++ C G +E+ K + EL+ + S L+ G
Sbjct: 545 ADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGE 604
Query: 238 GDAEEGLKLFVR-MGENGV 255
+ E K R M E GV
Sbjct: 605 ANMWEDAKRARRMMNERGV 623
>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Brachypodium distachyon]
Length = 707
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 184/657 (28%), Positives = 306/657 (46%), Gaps = 105/657 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K G T+ N LI +Y+K LR + ++F MPERNV SW ++ ++ D
Sbjct: 27 HGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMPERNVVSWTALMVGFLRHGDA 86
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
++ L+L M+S + + +EFT++++L
Sbjct: 87 RE--------------------------------CLRLLGAMRSLSD-VAPNEFTLSASL 113
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C + ++ G +H V+ + +SL+ +YSK +A RVF+G
Sbjct: 114 KACGVVGDMAAGVWIHGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTV----- 168
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF----- 247
+ V+WN +ISGY G + L +F
Sbjct: 169 ----------------------------FRNLVTWNAMISGYAHAGHGRDSLLVFREMQQ 200
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL--ISNPFVSSGIVDVYC 305
R E + +E TFAS L AC L + ++H+ ++ G+ SN ++ ++D+Y
Sbjct: 201 RRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDMYV 260
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
KC + + A + F+ L +KN + WT + G
Sbjct: 261 KCRCL------------------------------LPMAMQVFNRLEQKNAIQWTTVIVG 290
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
+ + + +L F + GV D +L ++G A A + G+++H Y ++ +
Sbjct: 291 HAQEGQVKEAMELFGRFWSS-GVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGL 349
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
D + ++L+DMY KCG A F+ R++V + MI HGH ++AI +FEEM
Sbjct: 350 DVSVANSLIDMYHKCGLTDEAARRFREVPARNVVSWTAMINGLGKHGHGQEAIHMFEEMR 409
Query: 486 EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQL 545
+G++PD V ++A+LSA H G VE +YF+++ D ++ P +HYACM+DL GRA +L
Sbjct: 410 AEGVEPDEVAYLALLSACSHSGLVEECRRYFSAIRHDRRLRPRAEHYACMVDLLGRAGEL 469
Query: 546 EKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVY 605
+A + + ++P + + L+ CR+++N + EA E LL ++G+N YV L+N++
Sbjct: 470 SEAKDLVATMPMAPTVGVWQTLLSACRVHKNVTVGREAGETLLAIDGDNPVNYVMLSNIF 529
Query: 606 AAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIF-TVGDVSHPKTNAIYSVL 661
A G+W E R+R MR + GCSWV V E H F GD SHP+ I VL
Sbjct: 530 AEAGDWRECQRVRGAMRRRGLRKQGGCSWVEVGKEAHFFYGGGDDSHPRAADICCVL 586
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/426 (24%), Positives = 170/426 (39%), Gaps = 79/426 (18%)
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
G QLH ++K + ++LIDMY+KC
Sbjct: 23 GAQLHGALLKLGFGSDTMLGNNLIDMYAKC------------------------------ 52
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE-NGVRWNEHTF 262
GE+ MA + F PE N VSW L+ G++++GDA E L+L M + V NE T
Sbjct: 53 --GELRMAGEVFGGMPERN-VVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTL 109
Query: 263 ASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGV 322
+++L AC + ++ IH ++ G + V A S++LL
Sbjct: 110 SASLKACGVVGDMAAGVWIHGACVRAGFEGHHVV----------------ANSLVLL--- 150
Query: 323 RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF 382
YS G + +ARR FD +N+V W A+ SGY A + + E
Sbjct: 151 ------------YSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGRDSLLVFREM 198
Query: 383 VTK----EGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI--STLVDM 436
+ E D LL AC A G ++HA ++ GV I L+DM
Sbjct: 199 QQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDM 258
Query: 437 YSKCGN-MTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVT 495
Y KC + A +F +++ + + +I +A G ++A+ LF G++ D
Sbjct: 259 YVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHV 318
Query: 496 FVAILSAFRHCGSVEMGEK---YFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
+++ F VE G + Y A +S +ID+Y + ++A
Sbjct: 319 LSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANS----LIDMYHKCGLTDEAARRF 374
Query: 553 KSIPTE 558
+ +P
Sbjct: 375 REVPAR 380
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF 453
++ +L A A +A+H G ++H +L++G D L + L+DMY+KCG + A +F
Sbjct: 6 MIADMLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGM 65
Query: 454 IERDLVLYNVMIACYAHHGHEEKAILLFEEMLE-KGIKPDAVTFVAILSAFRHCGSV 509
ER++V + ++ + HG + + L M + P+ T A L A CG V
Sbjct: 66 PERNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKA---CGVV 119
>gi|242063912|ref|XP_002453245.1| hypothetical protein SORBIDRAFT_04g002445 [Sorghum bicolor]
gi|241933076|gb|EES06221.1| hypothetical protein SORBIDRAFT_04g002445 [Sorghum bicolor]
Length = 603
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 187/640 (29%), Positives = 308/640 (48%), Gaps = 88/640 (13%)
Query: 44 SRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGY 103
+R++FDEM ERNVF+WN +IS +++ L AR +FD+ P ++ V++ ++L GY G
Sbjct: 12 ARRVFDEMSERNVFTWNCMISGLVRNGMLTDARGVFDTMPFRNSVSWAALLTGYARC-GR 70
Query: 104 EADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTS-NDASGFA 162
A+A +LF M D V+ + L N R F V + ND S
Sbjct: 71 VAEARELFDRMP--------DRSVVSWNAMISGYLWNGMVDRARDLFDVMPARNDVSWLM 122
Query: 163 VSSLIDMYSKCRCYEEACRVFE------------------------------GCTEEVNL 192
+I Y K + EA +F+ G + +L
Sbjct: 123 ---MISGYMKRKRVREAREIFDRAPSPTTSVCNALLSGYAEHGYLKDAEDLFGRMQTPDL 179
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+S NAM+ R G M++A + F PE D VSW ++ GY+QNGD + K+F M +
Sbjct: 180 VSWNAMITGYTRAGMMQVAQRLFDEMPE-KDTVSWTAIVRGYLQNGDVDAAWKVFQDMPD 238
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+++ +W N ++S VS E ++
Sbjct: 239 --------------------------RDVLAW---NTMMSGFVVS----------ERLDD 259
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
A + R+ S ++++ GY QG+M+ A F + EK+ W L SGY
Sbjct: 260 ALRLFADMPDRDLVSWNTILQGYVQQGDMDGATAWFRKMPEKDEASWNTLISGYKD---- 315
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
E +LLSE +T+ G D + + C+ AAL G+ +H ++ G + D ++S+
Sbjct: 316 EGALNLLSE-MTQGGYRPDQATWSVAISICSSLAALGCGRMVHVCTIKTGFERDALVMSS 374
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
L+ MYSKCG +T A +F ++RD V +N MIA YA+HG +A+ LF+ M + G PD
Sbjct: 375 LISMYSKCGLITEASQVFDLIVQRDTVTWNAMIATYAYHGLAAEALTLFDRMTKDGFSPD 434
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
TF+++LSA H G + G +F SM D+ + P +DHY+CM+DL GR+ + +A F
Sbjct: 435 HATFLSVLSACAHKGYLYEGCHHFRSMQQDWNLIPRSDHYSCMVDLLGRSGFVHQAYNFT 494
Query: 553 KSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWA 612
+ IP++ + + C + + +L + +L+ ++ Y L+N+YAA+G W+
Sbjct: 495 RRIPSDLQINAWETLFSSCNAHGDIQLGELVAKNVLQSRPSDGGMYTLLSNIYAAKGMWS 554
Query: 613 EMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
+R M+ + GCSW+ ++ ++ F+ D +HP
Sbjct: 555 SAASVRGLMKEQGLKKETGCSWIELKGDVVSFSSNDKAHP 594
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 130/519 (25%), Positives = 217/519 (41%), Gaps = 100/519 (19%)
Query: 24 TTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP 83
+ ++ N +I Y + ++ +R LFD MP RN SW +IS +K +++AR +FD +P
Sbjct: 85 SVVSWNAMISGYLWNGMVDRARDLFDVMPARNDVSWLMMISGYMKRKRVREAREIFDRAP 144
Query: 84 HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSAD---EHIRMDEFTVTSTLNLCVKLLN 140
N++L GY GY DA LF MQ+ D + + +T + + +L +
Sbjct: 145 SPTTSVCNALLSGYAE-HGYLKDAEDLFGRMQTPDLVSWNAMITGYTRAGMMQVAQRLFD 203
Query: 141 -------VGFGRQLHAFMVKTSNDA--------------------SGFAVSSLIDMYSKC 173
V + + ++ DA SGF VS +D
Sbjct: 204 EMPEKDTVSWTAIVRGYLQNGDVDAAWKVFQDMPDRDVLAWNTMMSGFVVSERLD----- 258
Query: 174 RCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISG 233
+A R+F + +L+S N ++ ++G+M+ A F + PE D SWNTLISG
Sbjct: 259 ----DALRLFADMPDR-DLVSWNTILQGYVQQGDMDGATAWFRKMPE-KDEASWNTLISG 312
Query: 234 YVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISN 293
Y G L L M + G R ++ T++ A+S C L + C + +H +K G +
Sbjct: 313 YKDEG----ALNLLSEMTQGGYRPDQATWSVAISICSSLAALGCGRMVHVCTIKTGFERD 368
Query: 294 PFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
V S ++ +Y KC G + EA + FD + +
Sbjct: 369 ALVMSSLISMYSKC-------------------------------GLITEASQVFDLIVQ 397
Query: 354 KNVVVWTALFSGYVK---AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHP 410
++ V W A+ + Y A LFD + TK+G D + +L ACA + L+
Sbjct: 398 RDTVTWNAMIATYAYHGLAAEALTLFDRM----TKDGFSPDHATFLSVLSACAHKGYLYE 453
Query: 411 GKEIHAYILRMGVQMDKKLI------STLVDMYSKCGNMTYAEIIFQNFIERDLVL--YN 462
G H + +Q D LI S +VD+ + G + F I DL + +
Sbjct: 454 G--CHHF---RSMQQDWNLIPRSDHYSCMVDLLGRSG-FVHQAYNFTRRIPSDLQINAWE 507
Query: 463 VMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
+ + HG + L+ + +L+ +P +LS
Sbjct: 508 TLFSSCNAHGDIQLGELVAKNVLQS--RPSDGGMYTLLS 544
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 104/276 (37%), Gaps = 66/276 (23%)
Query: 339 GNMEEARRHFDSLTEKNV-------------------------------VVWTALFSGYV 367
G + ARR FD ++E+NV V W AL +GY
Sbjct: 7 GRVGAARRVFDEMSERNVFTWNCMISGLVRNGMLTDARGVFDTMPFRNSVSWAALLTGYA 66
Query: 368 KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAA----LHPGKEIHAYILRMGV 423
+ +L + V +A+I L +A + P + ++++ +
Sbjct: 67 RCGRVAEARELFDRMPDRSVVSWNAMISGYLWNGMVDRARDLFDVMPARNDVSWLMMISG 126
Query: 424 QMDKKLI------------------STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMI 465
M +K + + L+ Y++ G + AE +F DLV +N MI
Sbjct: 127 YMKRKRVREAREIFDRAPSPTTSVCNALLSGYAEHGYLKDAEDLFGRMQTPDLVSWNAMI 186
Query: 466 ACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKI 525
Y G + A LF+EM EK D V++ AI+ + G V+ K F M
Sbjct: 187 TGYTRAGMMQVAQRLFDEMPEK----DTVSWTAIVRGYLQNGDVDAAWKVFQDM------ 236
Query: 526 SPETD--HYACMIDLYGRANQLEKAIEFMKSIPTEE 559
P+ D + M+ + + +L+ A+ +P +
Sbjct: 237 -PDRDVLAWNTMMSGFVVSERLDDALRLFADMPDRD 271
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 79/177 (44%), Gaps = 22/177 (12%)
Query: 11 ICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSH 70
+ HV IK G + + LI +YSK L+ E+ ++FD + +R+ +WN +I+
Sbjct: 355 MVHVCTIKTGFERDALVMSSLISMYSKCGLITEASQVFDLIVQRDTVTWNAMIATYAYHG 414
Query: 71 DLKQARSLFDS------SPHKDLVTYNSML--CGYINAEGYEADALKLFIEMQSADEHI- 121
+A +LFD SP D T+ S+L C + +GY + F MQ I
Sbjct: 415 LAAEALTLFDRMTKDGFSP--DHATFLSVLSACAH---KGYLYEGCHHFRSMQQDWNLIP 469
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEE 178
R D ++ L L GF Q + F + +D +++ ++S C + +
Sbjct: 470 RSDHYSCMVDL-----LGRSGFVHQAYNFTRRIPSD---LQINAWETLFSSCNAHGD 518
>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1028
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 215/746 (28%), Positives = 328/746 (43%), Gaps = 158/746 (21%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN---- 60
NL L+ H +AIK GL + L+ +YSK + + K+F+ + ERN WN
Sbjct: 342 NLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIR 401
Query: 61 -------------------------------TIISACIKSHDLK---------------- 73
+++S C SHDL+
Sbjct: 402 GYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTK 461
Query: 74 -------------------QARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
AR +F+ +D V++N+++ GY+ E E++A LF+ M
Sbjct: 462 NLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDEN-ESEAFDLFMRM 520
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
S I D + STL C + + G+Q+H VK D SSLIDMYSKC
Sbjct: 521 NSCG--IVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCG 578
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
E+A +VF E W VS N LI+GY
Sbjct: 579 IIEDARKVFSSMPE---------------------------W------SVVSMNALIAGY 605
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
QN + EE + LF M GV +E TFA+ + AC ++ + H ++K G
Sbjct: 606 SQN-NLEEAVVLFQEMLTKGVNPSEITFATIVEACHKPESLTLGTQFHGQIIKWG----- 659
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQG------NMEEARRHF 348
FS +G SL G M EA F
Sbjct: 660 -------------------------------FSSEGEYLGISLLGLYMNSRRMAEACALF 688
Query: 349 DSLT-EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAA 407
L+ K++V+WT + SG+ + E E + +G + D V +L C++ ++
Sbjct: 689 SELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKE-MRHDGALPDQATFVTVLRVCSVLSS 747
Query: 408 LHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER-DLVLYNVMIA 466
L G+ IH+ I + +D+ +TL+DMY+KCG+M + +F R ++V +N +I
Sbjct: 748 LREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLIN 807
Query: 467 CYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKIS 526
YA +G+ E A+ +F+ M + I PD +TF+ +L+A H G V G K F M Y I
Sbjct: 808 GYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIE 867
Query: 527 PETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGE-AEE 585
DH ACM+DL GR L++A +F+++ + DA + S L CR++ + ++ GE A E
Sbjct: 868 ARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGD-DMRGEIAAE 926
Query: 586 KLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFT 645
+L+ LE N + YV L+N+YA++G W E +RK MR + G SW+ V HIF
Sbjct: 927 RLIELEPQNSSAYVLLSNIYASQGRWEEANALRKAMRDRGVKKVPGYSWIDVGQRRHIFA 986
Query: 646 VGDVSHPKTNAIYSVLAIFTGELYEI 671
GD SH I +F +LY++
Sbjct: 987 AGDQSHSDIGKI----EMFLEDLYDL 1008
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 155/598 (25%), Positives = 265/598 (44%), Gaps = 106/598 (17%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R N++ H IK GL + L+ +Y+K + L +++++FD + + N W
Sbjct: 172 RETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTC 231
Query: 62 IISACIKS-----------------------------------HDLKQARSLFDSSPHKD 86
+ S +K+ LK AR LF P D
Sbjct: 232 LFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAFVTVINTYISLGKLKDARLLFGEMPSPD 291
Query: 87 LVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQ 146
+V +N M+ G+ G E A++ F+ M+ + ++ T+ S L+ + N+ G
Sbjct: 292 VVAWNVMISGH-GKRGCEIVAIEYFLNMRKSS--VKSTRSTLGSVLSAIGIVANLDLGLV 348
Query: 147 LHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREG 206
+HA +K ++ + SSL+ MYSKC E A +VFE E
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEER----------------- 391
Query: 207 EMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASAL 266
ND V WN +I GY NG++ + ++LF+ M +G ++ TF S L
Sbjct: 392 ---------------ND-VLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLL 435
Query: 267 SACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSF 326
S C +++ + HS ++K L N FV + +VD+Y KC
Sbjct: 436 STCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKC------------------- 476
Query: 327 SISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKE 386
G +E+AR+ F+ + +++ V W + GYV+ +N FDL +
Sbjct: 477 ------------GALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMR-MNSC 523
Query: 387 GVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYA 446
G+V+D L L AC L+ GK++H ++ G+ S+L+DMYSKCG + A
Sbjct: 524 GIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDA 583
Query: 447 EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHC 506
+F + E +V N +IA Y+ + EE A++LF+EML KG+ P +TF I+ A
Sbjct: 584 RKVFSSMPEWSVVSMNALIAGYSQNNLEE-AVVLFQEMLTKGVNPSEITFATIVEACHKP 642
Query: 507 GSVEMGEKYFNSMTADYKISPETDHYA-CMIDLYGRANQLEKAIEFMKSIPTEEDAVI 563
S+ +G + F+ + S E ++ ++ LY + ++ +A + + + V+
Sbjct: 643 ESLTLGTQ-FHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELSSPKSIVL 699
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 180/385 (46%), Gaps = 40/385 (10%)
Query: 223 DAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIH 282
D +WN+++S Y G + L+ FV + EN + N+ TF+ LS NV+ ++IH
Sbjct: 124 DVTAWNSMLSMYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIH 183
Query: 283 SWVLKNGLISNPFVSSGIVDVYCKCENMNYA----------------------------- 313
++K GL N + +VD+Y KC+ + A
Sbjct: 184 CSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPE 243
Query: 314 ESMLLLKGVR------NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
E++++ + +R + + ++I Y G +++AR F + +VV W + SG+
Sbjct: 244 EAVIVFERMRGEGHRPDHLAFVTVINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHG 303
Query: 368 KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDK 427
K + CE + + K V + L +L A + A L G +HA +++G+ +
Sbjct: 304 K-RGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNI 362
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
+ S+LV MYSKC M A +F+ ER+ VL+N MI YAH+G K + LF +M
Sbjct: 363 YVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSS 422
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEK 547
G D TF ++LS +EMG + F+S+ K++ ++D+Y + LE
Sbjct: 423 GYNIDDFTFTSLLSTCAVSHDLEMGSQ-FHSIIIKKKLTKNLFVGNALVDMYAKCGALED 481
Query: 548 AIEFMKSIPTEEDA---VILGSFLN 569
A + + + ++ I+G ++
Sbjct: 482 ARQIFEHMCDRDNVSWNTIIGGYVQ 506
>gi|224090525|ref|XP_002309013.1| predicted protein [Populus trichocarpa]
gi|222854989|gb|EEE92536.1| predicted protein [Populus trichocarpa]
Length = 583
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 195/659 (29%), Positives = 308/659 (46%), Gaps = 101/659 (15%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L++ L H AIK I +N ++++Y+K LRE+R++FDEM ERN+ SW+ +IS
Sbjct: 19 LRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMSERNLVSWSAMIS- 77
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
GY G AL LF ++ +I +E
Sbjct: 78 ------------------------------GY-EQIGEPISALGLFSKL-----NIVPNE 101
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
+ S ++ C L + G+Q+H +K D+ F ++LI MY KC
Sbjct: 102 YVYASVISACASLKGLVQGKQIHGQALKFGLDSVSFVSNALITMYMKC------------ 149
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
G+ AL + ELN V++N LI+G+V+N ++G +
Sbjct: 150 --------------------GKCSDALLAYNEALELN-PVAYNALITGFVENQQPDKGFE 188
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
+ M ++G + TF L C ++K + +H +K L S F+ + I+ +Y
Sbjct: 189 VLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIGNLIITMYS 248
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
K +N +EEA + F S+ EK+++ W S
Sbjct: 249 K---LNL----------------------------LEEAEKAFRSIEEKDLISWNTFISS 277
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
+ E + E + + V D L AC+ A++ GK+IH +++R +
Sbjct: 278 CSHCNDHEKALEAFKEMLNECRVRPDEFTFASALAACSGLASMCNGKQIHGHLIRTRLYQ 337
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
D + L++MY+KCG + A IF ++LV +N MIA + +HG KA LF +M
Sbjct: 338 DVGAGNALINMYAKCGCIAKAYYIFSKMEHQNLVSWNTMIAGFGNHGFGGKAFELFAKMK 397
Query: 486 EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQL 545
G+KPD+VTFV +L+A H G V+ G YFNSM Y ISPE +H++C+IDL GRA +L
Sbjct: 398 TMGVKPDSVTFVGLLTASNHAGLVDEGLVYFNSMEETYGISPEIEHFSCLIDLLGRAGRL 457
Query: 546 EKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVY 605
+A E+MK P D V+LGS L+ CRL+ + + +LL+L+ + YV L+N+Y
Sbjct: 458 NEAKEYMKKFPFGHDTVVLGSLLSACRLHGDVDTGKCFARQLLKLQPATTSPYVLLSNLY 517
Query: 606 AAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIF 664
A++ W + K ++G + G S + V FTV D SH + I +L I
Sbjct: 518 ASDEMWDGVAEAWKLLKGSGLKKEPGHSLIEVNGTFEKFTVVDFSHSRIEEIMDMLKIL 576
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 190/422 (45%), Gaps = 70/422 (16%)
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
V S ++ C K + G LHA +KT+ + + ++++Y+KCR EA +VF+ +
Sbjct: 6 VGSLIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMS 65
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
E + VSW+ +ISGY Q G+ L LF
Sbjct: 66 ER---------------------------------NLVSWSAMISGYEQIGEPISALGLF 92
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
++ + NE+ +AS +SAC L+ + K+IH LK GL S FVS+ ++ +Y KC
Sbjct: 93 SKLN---IVPNEYVYASVISACASLKGLVQGKQIHGQALKFGLDSVSFVSNALITMYMKC 149
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
G +A ++ E N V + AL +G+V
Sbjct: 150 -------------------------------GKCSDALLAYNEALELNPVAYNALITGFV 178
Query: 368 KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDK 427
+ Q + F++L + ++G D V LLG C + L G+ +H +++ +
Sbjct: 179 ENQQPDKGFEVL-RMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTA 237
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML-E 486
+ + ++ MYSK + AE F++ E+DL+ +N I+ +H EKA+ F+EML E
Sbjct: 238 FIGNLIITMYSKLNLLEEAEKAFRSIEEKDLISWNTFISSCSHCNDHEKALEAFKEMLNE 297
Query: 487 KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLE 546
++PD TF + L+A S+ G++ + ++ + +I++Y + +
Sbjct: 298 CRVRPDEFTFASALAACSGLASMCNGKQIHGHLIRT-RLYQDVGAGNALINMYAKCGCIA 356
Query: 547 KA 548
KA
Sbjct: 357 KA 358
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 119/255 (46%), Gaps = 43/255 (16%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+LK + H Q IK L T N +I +YSK NLL E+ K F + E+++ SWNT IS
Sbjct: 217 DLKRGELLHCQTIKLKLNSTAFIGNLIITMYSKLNLLEEAEKAFRSIEEKDLISWNTFIS 276
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
+C +D ++ AL+ F EM + + +R D
Sbjct: 277 SCSHCNDHEK--------------------------------ALEAFKEMLN-ECRVRPD 303
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
EFT S L C L ++ G+Q+H +++T A ++LI+MY+KC C +A +F
Sbjct: 304 EFTFASALAACSGLASMCNGKQIHGHLIRTRLYQDVGAGNALINMYAKCGCIAKAYYIFS 363
Query: 185 GCTEEVNLISKNAMVAACCREG------EMEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
E NL+S N M+A G E+ +KT +P D+V++ L++ G
Sbjct: 364 K-MEHQNLVSWNTMIAGFGNHGFGGKAFELFAKMKTMGVKP---DSVTFVGLLTASNHAG 419
Query: 239 DAEEGLKLFVRMGEN 253
+EGL F M E
Sbjct: 420 LVDEGLVYFNSMEET 434
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 137/326 (42%), Gaps = 37/326 (11%)
Query: 263 ASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGV 322
S + C + ++ +H+ +K S+ VS+ I+++Y KC + A +
Sbjct: 7 GSLIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMSE 66
Query: 323 RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF 382
RN S S+MI GY G A LFS
Sbjct: 67 RNLVSWSAMISGYEQIGEPISA---------------LGLFS------------------ 93
Query: 383 VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGN 442
K +V + + ++ ACA L GK+IH L+ G+ + + L+ MY KCG
Sbjct: 94 --KLNIVPNEYVYASVISACASLKGLVQGKQIHGQALKFGLDSVSFVSNALITMYMKCGK 151
Query: 443 MTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
+ A + + +E + V YN +I + + +K + M + G PD TFV +L
Sbjct: 152 CSDALLAYNEALELNPVAYNALITGFVENQQPDKGFEVLRMMYQDGFFPDRFTFVGLLGT 211
Query: 503 FRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAV 562
++ GE + T K++ +I +Y + N LE+A + +SI E+D +
Sbjct: 212 CNSRDDLKRGE-LLHCQTIKLKLNSTAFIGNLIITMYSKLNLLEEAEKAFRSI-EEKDLI 269
Query: 563 ILGSFLNVCRLNRNAELAGEAEEKLL 588
+F++ C + E A EA +++L
Sbjct: 270 SWNTFISSCSHCNDHEKALEAFKEML 295
>gi|119638439|gb|ABL85030.1| hypothetical protein 57h21.3 [Brachypodium sylvaticum]
Length = 618
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 187/622 (30%), Positives = 303/622 (48%), Gaps = 89/622 (14%)
Query: 43 ESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFD-SSPHKDLVTYNSMLCGYINAE 101
++R+LFD P+R+V SW +++A + L AR+LFD +++VT+ ++L GY A
Sbjct: 53 DARRLFDRTPDRDVVSWTALVAAYARQGMLHDARALFDRPDARRNVVTWTALLSGYARA- 111
Query: 102 GYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGF 161
G +A LF RM E V S
Sbjct: 112 GRVDEAEALFQ---------RMPERNVVSW------------------------------ 132
Query: 162 AVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPEL 221
+++++ Y+ +A +F+G + S N ++AA R G M+ A K F R PE
Sbjct: 133 --NTMLEAYTSAGRVRDAWTLFDGMPVR-DAGSWNILLAALVRSGNMDKARKLFDRMPER 189
Query: 222 NDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEI 281
N ++W T+++G ++G +E LF M E RNV
Sbjct: 190 N-VMAWTTMVAGIARSGSVDEARALFDGMPE--------------------RNVV----- 223
Query: 282 HSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNM 341
SW N +IS Y + ++ A + + R+ S + MI G+ ++
Sbjct: 224 -SW---NAMISG----------YARNHRIDEAHDLFMKMPTRDIASWNIMITGFIQDRDL 269
Query: 342 EEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGA 401
E A+ FD + +NV+ WT + +GY+++ E + + + EG+ + + + + A
Sbjct: 270 ERAQDLFDKMPRRNVITWTTMMNGYLQSMQSETALQIFNGMLV-EGIRPNQVTFLGAVDA 328
Query: 402 CALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLY 461
C+ A L G+++H I + Q D + STL+++Y+KCG + A +F E+D++ +
Sbjct: 329 CSNLAGLSEGQQVHQMICKTSFQFDTFIESTLMNLYAKCGEIRLARKVFDLSKEKDVISW 388
Query: 462 NVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTA 521
N MIA YAHHG +AI L+E+M EKG KP+ VT+V +LSA H G V+ G + F M
Sbjct: 389 NGMIAAYAHHGVGVEAIHLYEKMQEKGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVK 448
Query: 522 DYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAG 581
D I+ +HY C+IDL RA +L A + + E + + + L C + N +
Sbjct: 449 DRSIAVRDEHYTCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNALLGGCNSHGNESIGD 508
Query: 582 EAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEH 639
A LL E NN Y L N+YA+ G W E +IR +M RG+K + GCSW+ VE+
Sbjct: 509 LAARNLLEAEPNNAGTYTLLCNIYASAGKWKEAAKIRSEMNDRGLK--KQPGCSWIEVEN 566
Query: 640 EIHIFTVGDVSHPKTNAIYSVL 661
++H+F D SH +++ I S+L
Sbjct: 567 KVHVFVSRDKSHSESDLINSLL 588
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/464 (23%), Positives = 209/464 (45%), Gaps = 49/464 (10%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
+T L+ Y++ + E+ LF MPERNV SWNT++ A + ++ A +LFD P +
Sbjct: 99 VTWTALLSGYARAGRVDEAEALFQRMPERNVVSWNTMLEAYTSAGRVRDAWTLFDGMPVR 158
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR 145
D ++N +L + + G A KLF RM E V + + + G
Sbjct: 159 DAGSWNILLAALVRS-GNMDKARKLF---------DRMPERNVMAWTTMVAGIARSGSVD 208
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
+ A + + + + +++I Y++ +EA +F ++ S N M+ ++
Sbjct: 209 EARA-LFDGMPERNVVSWNAMISGYARNHRIDEAHDLFMKMPTR-DIASWNIMITGFIQD 266
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASA 265
++E A F + P N ++W T+++GY+Q+ +E L++F M G+R N+ TF A
Sbjct: 267 RDLERAQDLFDKMPRRN-VITWTTMMNGYLQSMQSETALQIFNGMLVEGIRPNQVTFLGA 325
Query: 266 LSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNS 325
+ AC L + +++H + K + F+ S ++++Y KC
Sbjct: 326 VDACSNLAGLSEGQQVHQMICKTSFQFDTFIESTLMNLYAKC------------------ 367
Query: 326 FSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV-KAQNCEALFDLLSEFVT 384
G + AR+ FD EK+V+ W + + Y EA+ L E +
Sbjct: 368 -------------GEIRLARKVFDLSKEKDVISWNGMIAAYAHHGVGVEAIH--LYEKMQ 412
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILR-MGVQMDKKLISTLVDMYSKCGNM 443
++G + + V LL AC+ + G I Y+++ + + + + L+D+ S+ G +
Sbjct: 413 EKGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTCLIDLCSRAGRL 472
Query: 444 TYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
A+ + +E ++N ++ HG+E L +LE
Sbjct: 473 GDAKRLIHFLKVEPSSTVWNALLGGCNSHGNESIGDLAARNLLE 516
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 119/259 (45%), Gaps = 34/259 (13%)
Query: 339 GNMEEARRHFDSLTEKNVVVWTALFSGYVKA---QNCEALFDLLSEFVTKEGVVTDALIL 395
G + +ARR FD +++VV WTAL + Y + + ALFD + VVT
Sbjct: 49 GRVSDARRLFDRTPDRDVVSWTALVAAYARQGMLHDARALFDRPD---ARRNVVT----W 101
Query: 396 VILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS--TLVDMYSKCGNMTYAEIIFQNF 453
LL A + E A RM ++ ++S T+++ Y+ G + A +F
Sbjct: 102 TALLSGYARAGRV---DEAEALFQRMP---ERNVVSWNTMLEAYTSAGRVRDAWTLFDGM 155
Query: 454 IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
RD +N+++A G+ +KA LF+ M E+ + + + +++ GSV+
Sbjct: 156 PVRDAGSWNILLAALVRSGNMDKARKLFDRMPERNV----MAWTTMVAGIARSGSVDEAR 211
Query: 514 KYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDA---VILGSFLNV 570
F+ M +S + MI Y R +++++A + +PT + A +++ F+
Sbjct: 212 ALFDGMPERNVVS-----WNAMISGYARNHRIDEAHDLFMKMPTRDIASWNIMITGFIQ- 265
Query: 571 CRLNRNAELAGEAEEKLLR 589
+R+ E A + +K+ R
Sbjct: 266 ---DRDLERAQDLFDKMPR 281
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 105/255 (41%), Gaps = 39/255 (15%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L E H K T + L+++Y+K +R +RK+FD E++V SWN +I+A
Sbjct: 335 LSEGQQVHQMICKTSFQFDTFIESTLMNLYAKCGEIRLARKVFDLSKEKDVISWNGMIAA 394
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
+H G +A+ L+ +MQ ++ + ++
Sbjct: 395 Y--AH------------------------------HGVGVEAIHLYEKMQ--EKGYKPND 420
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDA-SGFAVSSLIDMYSKCRCYEEACRVFE 184
T L+ C V G ++ +MVK + A + LID+ S+ +A R+
Sbjct: 421 VTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTCLIDLCSRAGRLGDAKRLIH 480
Query: 185 GCTEEVNLISKNAMVAACCREGEM---EMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
E + NA++ C G ++A + + E N+A ++ L + Y G +
Sbjct: 481 FLKVEPSSTVWNALLGGCNSHGNESIGDLAARNLL-EAEPNNAGTYTLLCNIYASAGKWK 539
Query: 242 EGLKLFVRMGENGVR 256
E K+ M + G++
Sbjct: 540 EAAKIRSEMNDRGLK 554
>gi|356562121|ref|XP_003549322.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 921
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 205/750 (27%), Positives = 330/750 (44%), Gaps = 142/750 (18%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H Q I +GL + N L+H+YS ++ ++ ++F E N+F+WNT++ A S +
Sbjct: 27 HAQLILSGLDASLFLLNNLLHVYSNCGMVDDAFRVFREANHANIFTWNTMLHAFFDSGRM 86
Query: 73 KQARSLFDSSPH--KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH--IRMDEFTV 128
++A +LFD P +D V++ +M+ GY G ++K F+ M H D F+
Sbjct: 87 REAENLFDEMPLIVRDSVSWTTMISGYCQ-NGLPGHSIKTFMSMLRDSNHDIQNCDPFSY 145
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE 188
T T+ C L + QLHA ++K A +SL+DMY KC A +F E
Sbjct: 146 TCTMKACGCLASTRLALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETIFLN-IE 204
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
+L N+M+ + AL F R PE D VSWNTLIS + Q G L FV
Sbjct: 205 SPSLFCWNSMIYGYSQLYGPYEALHVFTRMPE-RDHVSWNTLISVFSQYGHGIRCLSTFV 263
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
M G + N T+ S LSAC + ++K +H+ +L+ + F+ SG++D+Y KC
Sbjct: 264 EMCNLGFKPNFMTYGSVLSACASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKC- 322
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
G + ARR F+SL E+N V WT SG +
Sbjct: 323 ------------------------------GCLALARRVFNSLGEQNQVSWTCFISGVAQ 352
Query: 369 ---AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
+ ALF+ + + VV D L +LG C+ Q G+ +H Y ++ G+
Sbjct: 353 FGLGDDALALFNQMRQ----ASVVLDEFTLATILGVCSGQNYAASGELLHGYAIKSGMDS 408
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQN-------------------------------FI 454
+ + ++ MY++CG+ A + F++
Sbjct: 409 SVPVGNAIITMYARCGDTEKASLAFRSMPLRDTISWTAMITAFSQNGDIDRARQCFDMMP 468
Query: 455 ERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFV----------------- 497
ER+++ +N M++ Y HG E+ + L+ M K +KPD VTF
Sbjct: 469 ERNVITWNSMLSTYIQHGFSEEGMKLYVLMRSKAVKPDWVTFATSIRACADLATIKLGTQ 528
Query: 498 ------------------AILSAFRHCGSVEMGEKYFNSMTADYKIS------------- 526
+I++ + CG ++ K F+S+ IS
Sbjct: 529 VVSHVTKFGLSSDVSVANSIVTMYSRCGQIKEARKVFDSIHVKNLISWNAMMAAFAQNGL 588
Query: 527 -----------------PETDHY-ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFL 568
P+ Y A + DL GRA L +A + +P + +A + G+ L
Sbjct: 589 GNKAIETYEAMLRTECKPDHISYVAVLSDLLGRAGLLNQAKNLIDGMPFKPNATVWGALL 648
Query: 569 NVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNR 628
CR++ ++ LA A +KL+ L + YV LAN+YA G + +RK M+ +
Sbjct: 649 GACRIHHDSILAETAAKKLMELNVEDSGGYVLLANIYAESGELENVADMRKLMKVKGIRK 708
Query: 629 FAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
GCSW+ V++ +H+FTV + SHP+ N +Y
Sbjct: 709 SPGCSWIEVDNRVHVFTVDETSHPQINKVY 738
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 129/430 (30%), Positives = 200/430 (46%), Gaps = 26/430 (6%)
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
R+LHA ++ + DAS F +++L+ +YS C ++A RVF N+ + N M+ A
Sbjct: 23 ARKLHAQLILSGLDASLFLLNNLLHVYSNCGMVDDAFRVFRE-ANHANIFTWNTMLHAFF 81
Query: 204 REGEMEMALKTFWRQPEL-NDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG----VRWN 258
G M A F P + D+VSW T+ISGY QNG +K F+ M + +
Sbjct: 82 DSGRMREAENLFDEMPLIVRDSVSWTTMISGYCQNGLPGHSIKTFMSMLRDSNHDIQNCD 141
Query: 259 EHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLL 318
++ + AC L + + A ++H+ V+K L + + + +VD+Y KC + AE++ L
Sbjct: 142 PFSYTCTMKACGCLASTRLALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETIFL 201
Query: 319 LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL---FSGYVKAQNCEAL 375
+ F +SMI GYS EA F + E++ V W L FS Y C +
Sbjct: 202 NIESPSLFCWNSMIYGYSQLYGPYEALHVFTRMPERDHVSWNTLISVFSQYGHGIRCLST 261
Query: 376 FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVD 435
F + K +T + L ACA + L G +HA ILRM +D L S L+D
Sbjct: 262 FVEMCNLGFKPNFMTYGSV----LSACASISDLKWGAHLHARILRMEHSLDAFLGSGLID 317
Query: 436 MYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVT 495
MY+KCG + A +F + E++ V + I+ A G + A+ LF +M + + D T
Sbjct: 318 MYAKCGCLALARRVFNSLGEQNQVSWTCFISGVAQFGLGDDALALFNQMRQASVVLDEFT 377
Query: 496 FVAILSAFRHCGSVEMGEKYFNS--MTADYKISPETDHYA----CMIDLYGRANQLEKAI 549
IL V G+ Y S + Y I D +I +Y R EKA
Sbjct: 378 LATIL-------GVCSGQNYAASGELLHGYAIKSGMDSSVPVGNAIITMYARCGDTEKAS 430
Query: 550 EFMKSIPTEE 559
+S+P +
Sbjct: 431 LAFRSMPLRD 440
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 114/205 (55%), Gaps = 4/205 (1%)
Query: 11 ICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSH 70
+ H AIK+G+ + N +I +Y++ ++ F MP R+ SW +I+A ++
Sbjct: 396 LLHGYAIKSGMDSSVPVGNAIITMYARCGDTEKASLAFRSMPLRDTISWTAMITAFSQNG 455
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
D+ +AR FD P ++++T+NSML YI G+ + +KL++ M+S + ++ D T +
Sbjct: 456 DIDRARQCFDMMPERNVITWNSMLSTYIQ-HGFSEEGMKLYVLMRS--KAVKPDWVTFAT 512
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
++ C L + G Q+ + + K + +S++ MYS+C +EA +VF+ +
Sbjct: 513 SIRACADLATIKLGTQVVSHVTKFGLSSDVSVANSIVTMYSRCGQIKEARKVFDSIHVK- 571
Query: 191 NLISKNAMVAACCREGEMEMALKTF 215
NLIS NAM+AA + G A++T+
Sbjct: 572 NLISWNAMMAAFAQNGLGNKAIETY 596
>gi|356519383|ref|XP_003528352.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 614
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 182/573 (31%), Positives = 298/573 (52%), Gaps = 44/573 (7%)
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH-IRMDEFTVT 129
D A +F+ L YN M+ ++ + + + A+ LF Q EH + D +T
Sbjct: 57 DFNYANRIFNYIHDPSLFIYNLMIKAFVKSGSFRS-AISLF---QQLREHGVWPDNYTYP 112
Query: 130 STLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEE 189
L + V G ++HAF+VKT + + +S +DMY++ E +VFE
Sbjct: 113 YVLKGIGCIGEVREGEKVHAFVVKTGLEFDPYVCNSFMDMYAELGLVEGFTQVFE----- 167
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
EM P+ DAVSWN +ISGYV+ EE + ++ R
Sbjct: 168 -------------------EM--------PD-RDAVSWNIMISGYVRCKRFEEAVDVYRR 199
Query: 250 M-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
M E+ + NE T S LSAC LRN++ KEIH ++ L + + ++D+YCKC
Sbjct: 200 MWTESNEKPNEATVVSTLSACAVLRNLELGKEIHDYIASE-LDLTTIMGNALLDMYCKCG 258
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
+++ A + V+N +SM+ GY + G +++AR F+ +++V+WTA+ +GYV+
Sbjct: 259 HVSVAREIFDAMTVKNVNCWTSMVTGYVICGQLDQARNLFERSPSRDIVLWTAMINGYVQ 318
Query: 369 AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK 428
E L E + GV D I+V LL CA AL GK IH YI +++D
Sbjct: 319 FNRFEETIALFGEMQIR-GVKPDKFIVVTLLTGCAQSGALEQGKWIHNYIDENRIKVDAV 377
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
+ + L++MY+KCG + + IF E+D + +I A +G +A+ LF+ M G
Sbjct: 378 VGTALIEMYAKCGCIEKSFEIFNGLKEKDTTSWTSIICGLAMNGKPSEALELFKAMQTCG 437
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
+KPD +TFVA+LSA H G VE G K F+SM++ Y I P +HY C IDL GRA L++A
Sbjct: 438 LKPDDITFVAVLSACSHAGLVEEGRKLFHSMSSMYHIEPNLEHYGCFIDLLGRAGLLQEA 497
Query: 549 IEFMKSIPTEEDAVIL---GSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVY 605
E +K +P + + +I+ G+ L+ CR N ++ L +++ ++ + + LA++Y
Sbjct: 498 EELVKKLPAQNNEIIVPLYGALLSACRTYGNIDMGERLATALAKVKSSDSSLHTLLASIY 557
Query: 606 AAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVE 638
A+ W ++ ++R +M+ + + G S + V+
Sbjct: 558 ASADRWEDVRKVRNKMKDLGIKKVPGYSAIEVD 590
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 125/541 (23%), Positives = 230/541 (42%), Gaps = 100/541 (18%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
++E H +K GL N + +Y++ L+ ++F+EMP+R+ SWN +IS
Sbjct: 124 VREGEKVHAFVVKTGLEFDPYVCNSFMDMYAELGLVEGFTQVFEEMPDRDAVSWNIMIS- 182
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
GY+ + +E +A+ ++ M + + + + +E
Sbjct: 183 ------------------------------GYVRCKRFE-EAVDVYRRMWT-ESNEKPNE 210
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
TV STL+ C L N+ G+++H + + + D + ++L+DMY KC A +F+
Sbjct: 211 ATVVSTLSACAVLRNLELGKEIHDY-IASELDLTTIMGNALLDMYCKCGHVSVAREIFDA 269
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
T + N+ +MV G+++ A F R P D V W +I+GYVQ EE +
Sbjct: 270 MTVK-NVNCWTSMVTGYVICGQLDQARNLFERSPS-RDIVLWTAMINGYVQFNRFEETIA 327
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
LF M GV+ ++ + L+ C ++ K IH+++ +N + + V + ++++Y
Sbjct: 328 LFGEMQIRGVKPDKFIVVTLLTGCAQSGALEQGKWIHNYIDENRIKVDAVVGTALIEMYA 387
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
KC G +E++ F+ L EK+ WT++ G
Sbjct: 388 KC-------------------------------GCIEKSFEIFNGLKEKDTTSWTSIICG 416
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
+L T G+ D + V +L AC+ HA ++ G
Sbjct: 417 LAMNGKPSEALELFKAMQTC-GLKPDDITFVAVLSACS-----------HAGLVEEG--- 461
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
+KL ++ MY IE +L Y I G ++A L +++
Sbjct: 462 -RKLFHSMSSMYH---------------IEPNLEHYGCFIDLLGRAGLLQEAEELVKKLP 505
Query: 486 EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQL 545
+ + + A+LSA R G+++MGE+ ++ A K S + H + +Y A++
Sbjct: 506 AQNNEIIVPLYGALLSACRTYGNIDMGERLATAL-AKVKSSDSSLH-TLLASIYASADRW 563
Query: 546 E 546
E
Sbjct: 564 E 564
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 141/296 (47%), Gaps = 14/296 (4%)
Query: 339 GNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVIL 398
G+ A R F+ + + ++ ++ + +VK+ + + L + + + GV D +
Sbjct: 56 GDFNYANRIFNYIHDPSLFIYNLMIKAFVKSGSFRSAISLFQQ-LREHGVWPDNYTYPYV 114
Query: 399 LGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDL 458
L + G+++HA++++ G++ D + ++ +DMY++ G + +F+ +RD
Sbjct: 115 LKGIGCIGEVREGEKVHAFVVKTGLEFDPYVCNSFMDMYAELGLVEGFTQVFEEMPDRDA 174
Query: 459 VLYNVMIACYAHHGHEEKAILLFEEM-LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFN 517
V +N+MI+ Y E+A+ ++ M E KP+ T V+ LSA ++E+G++ +
Sbjct: 175 VSWNIMISGYVRCKRFEEAVDVYRRMWTESNEKPNEATVVSTLSACAVLRNLELGKEIHD 234
Query: 518 SMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE----DAVILGSFLNVCRL 573
+ ++ ++ T ++D+Y + + A E ++ + +++ G ++ +L
Sbjct: 235 YIASELDLT--TIMGNALLDMYCKCGHVSVAREIFDAMTVKNVNCWTSMVTG-YVICGQL 291
Query: 574 NRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRF 629
++ L + + + L YVQ + EM Q+RG+K ++F
Sbjct: 292 DQARNLFERSPSRDIVLWTAMINGYVQFNRFEETIALFGEM-----QIRGVKPDKF 342
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 82/171 (47%), Gaps = 11/171 (6%)
Query: 396 VILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLV--DMYSKCGNMTYAEIIFQNF 453
+ LL +C + L K+I A+I +G+Q D+ ++ L+ M S G+ YA IF
Sbjct: 12 ISLLKSCKSMSQL---KQIQAHIFCVGLQQDRDTLNKLMAFSMDSSLGDFNYANRIFNYI 68
Query: 454 IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
+ L +YN+MI + G AI LF+++ E G+ PD T+ +L G V GE
Sbjct: 69 HDPSLFIYNLMIKAFVKSGSFRSAISLFQQLREHGVWPDNYTYPYVLKGIGCIGEVREGE 128
Query: 514 KYFNSMTADYKISPETDHYAC--MIDLYGRANQLEKAIEFMKSIPTEEDAV 562
K + K E D Y C +D+Y +E + + +P + DAV
Sbjct: 129 KVHAFVV---KTGLEFDPYVCNSFMDMYAELGLVEGFTQVFEEMP-DRDAV 175
>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 882
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 192/666 (28%), Positives = 318/666 (47%), Gaps = 110/666 (16%)
Query: 4 LNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
L +K+ H +K+G+ ++ N L+ +Y K + ++R++FDEM R
Sbjct: 221 LVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVR--------- 271
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
D VTYN+M+CGY+ E E +++K+F+E + +
Sbjct: 272 ----------------------DSVTYNTMICGYLKLEMVE-ESVKMFLENL---DQFKP 305
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS-----LIDMYSKCRCYEE 178
D TVTS L C L ++ + ++ +M++ +GF + S LID+Y+KC
Sbjct: 306 DILTVTSVLCACGHLRDLSLAKYIYNYMLR-----AGFVLESTVKNILIDVYAKC----- 355
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
G+M A F E D VSWN++ISGY+Q+G
Sbjct: 356 ---------------------------GDMITARDVF-NSMECKDTVSWNSIISGYIQSG 387
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
D E +KLF M + + T+ +S L ++K K +HS +K+G+ + VS+
Sbjct: 388 DLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSN 447
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
++D+Y KC G + ++ + F+S+ + V
Sbjct: 448 ALIDMYAKC-------------------------------GEVGDSLKIFNSMGTLDTVT 476
Query: 359 WTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
W + S V+ + + ++ + K VV D ++ L CA AA GKEIH +
Sbjct: 477 WNTVISACVRFGDFATGLQVTTQ-MRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCL 535
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
LR G + + ++ + L++MYSKCG + + +F+ RD+V + MI Y +G EKA+
Sbjct: 536 LRFGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMIYAYGMYGEGEKAL 595
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
F +M + GI PD+V F+A++ A H G VE G F M YKI P +HYAC++DL
Sbjct: 596 ESFVDMEKSGIVPDSVVFIALIYACSHSGLVEKGLACFEKMKTHYKIDPMIEHYACVVDL 655
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARY 598
R+ ++ KA EF++++P E DA I S L CR + + E A +++ L ++
Sbjct: 656 LSRSQKISKAEEFIQAMPIEPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYS 715
Query: 599 VQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
+ +N YAA W ++ IRK +R + G SW+ + ++H+F GD S P++ AI+
Sbjct: 716 ILASNAYAALRKWDKVSLIRKSVRDKHIKKNPGYSWIEIGKKVHVFCSGDDSAPQSEAIH 775
Query: 659 SVLAIF 664
L I
Sbjct: 776 KSLEIL 781
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 131/570 (22%), Positives = 242/570 (42%), Gaps = 103/570 (18%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEM-PERNVFSWNT 61
S NL E H I GL + + +LI YS S +F + P +NV+ WN+
Sbjct: 17 SSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKNVYIWNS 76
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
II A K+ G+ AL+ + +++ + +
Sbjct: 77 IIRAFSKN--------------------------------GWFPKALEFYGKLR--ESKV 102
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
D++T S + C L + G ++ +++ ++ + ++L+DMYS+ A +
Sbjct: 103 SPDKYTFPSVIKACAGLFDAEMGDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQ 162
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
VF+ EM ++ D VSWN+LISGY +G E
Sbjct: 163 VFD------------------------EMPVR---------DLVSWNSLISGYSSHGYYE 189
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E L+++ + + + + T +S L A L VK + +H + LK+G+ S V++G++
Sbjct: 190 EALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLL 249
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
+Y K A + VR+S + ++MI GY +EE+ + F
Sbjct: 250 AMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMF------------- 296
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+ L +F D L + +L AC L K I+ Y+LR
Sbjct: 297 --------------LENLDQF------KPDILTVTSVLCACGHLRDLSLAKYIYNYMLRA 336
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
G ++ + + L+D+Y+KCG+M A +F + +D V +N +I+ Y G +A+ LF
Sbjct: 337 GFVLESTVKNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLF 396
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGR 541
+ M+ + D +T++ ++S ++ G K +S I + +ID+Y +
Sbjct: 397 KMMMIMEEQADHITYLMLISLSTRLADLKFG-KGLHSNGIKSGIYIDLSVSNALIDMYAK 455
Query: 542 ANQLEKAIEFMKSIPTEEDAVILGSFLNVC 571
++ +++ S+ T D V + ++ C
Sbjct: 456 CGEVGDSLKIFNSMGT-LDTVTWNTVISAC 484
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 116/495 (23%), Positives = 209/495 (42%), Gaps = 107/495 (21%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
+R L+L + + ++ ++AG L + N LI +Y+K + +R +F+ M ++ SWN
Sbjct: 320 LRDLSLAKYIYNYM--LRAGFVLESTVKNILIDVYAKCGDMITARDVFNSMECKDTVSWN 377
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
+IIS I+S DL +A LF K+ + M+ +H
Sbjct: 378 SIISGYIQSGDLMEAMKLF-----------------------------KMMMIMEEQADH 408
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
I T ++L +L ++ FG+ LH+ +K+ ++LIDMY+KC
Sbjct: 409 I-----TYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKC------- 456
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
GE+ +LK F L D V+WNT+IS V+ GD
Sbjct: 457 -------------------------GEVGDSLKIFNSMGTL-DTVTWNTVISACVRFGDF 490
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
GL++ +M +N V + TF L C L + KEIH +L+ G S + + +
Sbjct: 491 ATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNAL 550
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
+++Y KC G +E + R F+ ++ ++VV WT
Sbjct: 551 IEMYSKC-------------------------------GCLESSFRVFERMSRRDVVTWT 579
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
+ Y E + + + K G+V D+++ + L+ AC+ + G ++
Sbjct: 580 GMIYAYGMYGEGEKALESFVD-MEKSGIVPDSVVFIALIYACSHSGLVEKGLACFEK-MK 637
Query: 421 MGVQMDKKL--ISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKA 477
++D + + +VD+ S+ ++ AE Q IE D ++ ++ G E A
Sbjct: 638 THYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIEPDASIWASVLRACRTSGDMETA 697
Query: 478 ILLFEEMLEKGIKPD 492
+ ++E + PD
Sbjct: 698 ERVSRRIIE--LNPD 710
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 76/162 (46%), Gaps = 6/162 (3%)
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIE-RDLV 459
A + + L+ + IHA ++ +G+ L+D YS + +F+ +++
Sbjct: 13 ALSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKNVY 72
Query: 460 LYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSM 519
++N +I ++ +G KA+ + ++ E + PD TF +++ A EMG+ + +
Sbjct: 73 IWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQI 132
Query: 520 TADYKISPETDHYA--CMIDLYGRANQLEKAIEFMKSIPTEE 559
++ E+D Y ++D+Y R L +A + +P +
Sbjct: 133 L---EMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRD 171
>gi|413935435|gb|AFW69986.1| hypothetical protein ZEAMMB73_442164 [Zea mays]
Length = 658
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 176/627 (28%), Positives = 307/627 (48%), Gaps = 56/627 (8%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
T N ++ +++ LL ++R +FD MP RN SW +++ + + +AR LFD PH+
Sbjct: 68 FTWNCMVSGLARNGLLADARGVFDAMPSRNSVSWAALLTGYARRGRVAEARDLFDRMPHR 127
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR 145
++V++N+M+ GY+ G A +LF M + D+ S L + + R
Sbjct: 128 NVVSWNAMVSGYLR-NGMVDRARELFDAMPARDD---------VSWLMMVSGYMRRKRFR 177
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
+ + + ++L+ Y+ ++A +F G + + +S NAM+ R
Sbjct: 178 EAREIFDRAPSPPPTSVCNALLSGYAGYGYLKDAEELF-GRMQRPDRVSWNAMITGYTRA 236
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASA 265
G M++A + F P D VSW ++ GY+QNGD + ++F M +
Sbjct: 237 GMMQVARRLFDEMPG-KDTVSWTAIVRGYLQNGDVDAAWEVFQDMPD------------- 282
Query: 266 LSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNS 325
+++ +W N ++ VS + D +M R+
Sbjct: 283 -------------RDVLAW---NTMMGGFVVSDRLDDALRLFADMP----------DRDL 316
Query: 326 FSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTK 385
S ++++ GY QG+M+ A F S+ EK+ W + SGY E LLSE +T+
Sbjct: 317 VSWNTILQGYIQQGDMDSATTWFRSMLEKDETSWNTVISGYKD----EGALSLLSE-MTR 371
Query: 386 EGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTY 445
G D +++ CA AAL G+ +H ++ G + D ++S+L+ MYSKCG +T
Sbjct: 372 GGYRPDQATWSVVISVCASLAALGCGRMVHICTIKTGFEHDALVMSSLISMYSKCGLITE 431
Query: 446 AEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRH 505
A +F ++RD V +N MIA YA+HG +A+ LF+ M + PD TF+++LSA H
Sbjct: 432 ASQVFDLIVQRDTVTWNAMIATYAYHGLAAEALALFDRMTKDRFSPDHATFLSVLSACAH 491
Query: 506 CGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILG 565
G + G YF SM D+ + P +DHY+CM+DL GR+ + +A F + IP+
Sbjct: 492 KGYLYEGCHYFRSMQQDWNLVPRSDHYSCMVDLLGRSGFVHQAYNFTRKIPSNLQINAWE 551
Query: 566 SFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMK 625
+ + C + + +L + +L+ ++ Y L+N+YAA+G W+ +R M+
Sbjct: 552 TLFSSCNAHGDIQLGELVAKNVLQSRPSDGGMYTLLSNIYAAKGMWSSAATVRGLMKEQG 611
Query: 626 GNRFAGCSWVYVEHEIHIFTVGDVSHP 652
+ GCSW+ ++ ++ F+ D +HP
Sbjct: 612 LKKETGCSWIELKGDVVSFSSNDNAHP 638
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 121/517 (23%), Positives = 207/517 (40%), Gaps = 132/517 (25%)
Query: 18 KAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARS 77
+A T N L+ Y+ + L+++ +LF M + SWN +I+ ++ ++ AR
Sbjct: 185 RAPSPPPTSVCNALLSGYAGYGYLKDAEELFGRMQRPDRVSWNAMITGYTRAGMMQVARR 244
Query: 78 LFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVK 137
LFD P KD V++ +++ GY+ +A A ++F +M D V
Sbjct: 245 LFDEMPGKDTVSWTAIVRGYLQNGDVDA-AWEVFQDMPDRD-----------------VL 286
Query: 138 LLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNA 197
N G GF VS +D +A R+F + +L+S N
Sbjct: 287 AWNTMMG---------------GFVVSDRLD---------DALRLFADMPDR-DLVSWNT 321
Query: 198 MVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRW 257
++ ++G+M+ A T++R D SWNT+ISGY G L L M G R
Sbjct: 322 ILQGYIQQGDMDSA-TTWFRSMLEKDETSWNTVISGYKDEG----ALSLLSEMTRGGYRP 376
Query: 258 NEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESML 317
++ T++ +S C L + C + +H +K G + V S ++ +Y KC
Sbjct: 377 DQATWSVVISVCASLAALGCGRMVHICTIKTGFEHDALVMSSLISMYSKC---------- 426
Query: 318 LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK---AQNCEA 374
G + EA + FD + +++ V W A+ + Y A A
Sbjct: 427 ---------------------GLITEASQVFDLIVQRDTVTWNAMIATYAYHGLAAEALA 465
Query: 375 LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI---- 430
LFD + TK+ D + +L ACA + L+ G H + +Q D L+
Sbjct: 466 LFDRM----TKDRFSPDHATFLSVLSACAHKGYLYEG--CHYF---RSMQQDWNLVPRSD 516
Query: 431 --STLVD-----------------------------MYSKC---GNMTYAEIIFQNFIE- 455
S +VD ++S C G++ E++ +N ++
Sbjct: 517 HYSCMVDLLGRSGFVHQAYNFTRKIPSNLQINAWETLFSSCNAHGDIQLGELVAKNVLQS 576
Query: 456 --RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
D +Y ++ YA G A + M E+G+K
Sbjct: 577 RPSDGGMYTLLSNIYAAKGMWSSAATVRGLMKEQGLK 613
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 24/178 (13%)
Query: 11 ICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSH 70
+ H+ IK G + + LI +YSK L+ E+ ++FD + +R+ +WN +I A H
Sbjct: 399 MVHICTIKTGFEHDALVMSSLISMYSKCGLITEASQVFDLIVQRDTVTWNAMI-ATYAYH 457
Query: 71 DL-KQARSLFDS------SPHKDLVTYNSML--CGYINAEGYEADALKLFIEMQSADEHI 121
L +A +LFD SP D T+ S+L C + +GY + F MQ +
Sbjct: 458 GLAAEALALFDRMTKDRFSP--DHATFLSVLSACAH---KGYLYEGCHYFRSMQQDWNLV 512
Query: 122 -RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEE 178
R D ++ L L GF Q + F K S +++ ++S C + +
Sbjct: 513 PRSDHYSCMVDL-----LGRSGFVHQAYNFTRKI---PSNLQINAWETLFSSCNAHGD 562
>gi|356545987|ref|XP_003541414.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 613
Score = 288 bits (738), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 191/611 (31%), Positives = 315/611 (51%), Gaps = 44/611 (7%)
Query: 55 NVFSWNTIIS--ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
+ F +IS A S+ L + LF P+ DL +N ++ + ++ +AL L+
Sbjct: 9 DPFLMTPLISFFAAANSNALHHSHLLFTQIPNPDLFLFNLIIRAFSLSQ-TPHNALSLYK 67
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
+M S+ I D FT L C KL G Q+H + K+ +++ F V++L+ +Y
Sbjct: 68 KMLSSSPPIFPDTFTFPFLLKSCAKLSLPRLGLQVHTHVFKSGFESNVFVVNALLQVYFV 127
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
ACRVF+ + + D+VS+NT+I+
Sbjct: 128 FGDARNACRVFD---------------------------------ESPVRDSVSYNTVIN 154
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKN-GLI 291
G V+ G A +++F M V +E+TF + LSAC L + + +H V + G
Sbjct: 155 GLVRAGRAGCSMRIFAEMRGGFVEPDEYTFVALLSACSLLEDRGIGRVVHGLVYRKLGCF 214
Query: 292 S-NPFVSSGIVDVYCKCENMNYAESMLL-LKGVRNSFSISSMIVGYSLQGNMEEARRHFD 349
N + + +VD+Y KC + AE ++ G + +S++ Y+L+G +E ARR FD
Sbjct: 215 GENELLVNALVDMYAKCGCLEVAERVVRNGNGKSGVAAWTSLVSAYALRGEVEVARRLFD 274
Query: 350 SLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALH 409
+ E++VV WTA+ SGY A + +L E + G+ D +++V L ACA AL
Sbjct: 275 QMGERDVVSWTAMISGYCHAGCFQEALELFVE-LEDLGMEPDEVVVVAALSACARLGALE 333
Query: 410 PGKEIHAYILRMGVQ--MDKKLISTLVDMYSKCGNMTYAEIIFQNFIE--RDLVLYNVMI 465
G+ IH R Q ++ +VDMY+KCG++ A +F + + LYN ++
Sbjct: 334 LGRRIHHKYDRDSWQCGHNRGFTCAVVDMYAKCGSIEAALDVFLKTSDDMKTTFLYNSIM 393
Query: 466 ACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKI 525
+ AHHG E A+ LFEEM G++PD VT+VA+L A H G V+ G++ F SM ++Y +
Sbjct: 394 SGLAHHGRGEHAMALFEEMRLVGLEPDEVTYVALLCACGHSGLVDHGKRLFESMLSEYGV 453
Query: 526 SPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEE 585
+P+ +HY CM+DL GRA L +A ++++P + +AVI + L+ C+++ + ELA A +
Sbjct: 454 NPQMEHYGCMVDLLGRAGHLNEAYLLIQNMPFKANAVIWRALLSACKVDGDVELARLASQ 513
Query: 586 KLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFT 645
+LL +E ++ ARYV L+N+ E +R+ + + + G S V + +H F
Sbjct: 514 ELLAMENDHGARYVMLSNMLTLMDKHDEAASVRRAIDNVGIQKPPGWSHVEMNGTLHKFL 573
Query: 646 VGDVSHPKTNA 656
GD SHP+ A
Sbjct: 574 AGDKSHPEAKA 584
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 120/445 (26%), Positives = 206/445 (46%), Gaps = 52/445 (11%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
E NVF N ++ D + A +FD SP +D V+YN+++ G + A G ++++F
Sbjct: 112 ESNVFVVNALLQVYFVFGDARNACRVFDESPVRDSVSYNTVINGLVRA-GRAGCSMRIFA 170
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSN--DASGFAVSSLIDMY 170
EM+ + DE+T + L+ C L + G GR +H + + + V++L+DMY
Sbjct: 171 EMRGG--FVEPDEYTFVALLSACSLLEDRGIGRVVHGLVYRKLGCFGENELLVNALVDMY 228
Query: 171 SKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTL 230
+KC C E A RV + + + ++V+A GE+E+A + F + E D VSW +
Sbjct: 229 AKCGCLEVAERVVRNGNGKSGVAAWTSLVSAYALRGEVEVARRLFDQMGE-RDVVSWTAM 287
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIH------SW 284
ISGY G +E L+LFV + + G+ +E +ALSAC L ++ + IH SW
Sbjct: 288 ISGYCHAGCFQEALELFVELEDLGMEPDEVVVVAALSACARLGALELGRRIHHKYDRDSW 347
Query: 285 VLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKG--VRNSFSISSMIVGYSLQGNME 342
+ N + +VD+Y KC ++ A + L ++ +F +S++ G + G E
Sbjct: 348 QCGH----NRGFTCAVVDMYAKCGSIEAALDVFLKTSDDMKTTFLYNSIMSGLAHHGRGE 403
Query: 343 EARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGAC 402
A ALF E + G+ D + V LL AC
Sbjct: 404 HA---------------MALF-----------------EEMRLVGLEPDEVTYVALLCAC 431
Query: 403 ALQAALHPGKEIHAYIL-RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVL 460
+ GK + +L GV + +VD+ + G++ A ++ QN + + V+
Sbjct: 432 GHSGLVDHGKRLFESMLSEYGVNPQMEHYGCMVDLLGRAGHLNEAYLLIQNMPFKANAVI 491
Query: 461 YNVMIACYAHHGHEEKAILLFEEML 485
+ +++ G E A L +E+L
Sbjct: 492 WRALLSACKVDGDVELARLASQELL 516
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 153/328 (46%), Gaps = 45/328 (13%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLF-DEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPH 84
+ N L+ +Y+K L + ++ + + V +W +++SA +++ AR LFD
Sbjct: 219 LLVNALVDMYAKCGCLEVAERVVRNGNGKSGVAAWTSLVSAYALRGEVEVARRLFDQMGE 278
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
+D+V++ +M+ GY +A ++ +AL+LF+E++ D + DE V + L+ C +L + G
Sbjct: 279 RDVVSWTAMISGYCHAGCFQ-EALELFVELE--DLGMEPDEVVVVAALSACARLGALELG 335
Query: 145 RQLHAFMVKTS---NDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAA 201
R++H + S GF +++DMY+KC E A VF
Sbjct: 336 RRIHHKYDRDSWQCGHNRGF-TCAVVDMYAKCGSIEAALDVF------------------ 376
Query: 202 CCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHT 261
LKT ++ +N+++SG +G E + LF M G+ +E T
Sbjct: 377 ----------LKT---SDDMKTTFLYNSIMSGLAHHGRGEHAMALFEEMRLVGLEPDEVT 423
Query: 262 FASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG-IVDVYCKCENMNYAESMLLLK 320
+ + L AC V K + +L ++ G +VD+ + ++N E+ LL++
Sbjct: 424 YVALLCACGHSGLVDHGKRLFESMLSEYGVNPQMEHYGCMVDLLGRAGHLN--EAYLLIQ 481
Query: 321 GVR---NSFSISSMIVGYSLQGNMEEAR 345
+ N+ +++ + G++E AR
Sbjct: 482 NMPFKANAVIWRALLSACKVDGDVELAR 509
>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 861
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 190/613 (30%), Positives = 308/613 (50%), Gaps = 53/613 (8%)
Query: 54 RNVFSWNTIISACIKSHDLKQARSLFDSSPHK--DLVTYNSMLCGYINAEGYEADALKLF 111
R F +N ++S + + A+ LF SS DLVT+N+M+ + G +A+++
Sbjct: 190 RERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGDLVTWNTMISLLVQG-GRCEEAVQVL 248
Query: 112 IEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSN-DASGFAVSSLIDMY 170
+M + +R D T S L C +L +G GR++HAF++K + A+ F S+L+DMY
Sbjct: 249 YDMVALG--VRPDGVTFASALPACSRLELLGVGREVHAFVLKDDDLAANSFVASALVDMY 306
Query: 171 SKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTL 230
+ A RVF+ MV R+ M WN +
Sbjct: 307 ASNEQVSHARRVFD-------------MVPEHGRQLGM------------------WNAM 335
Query: 231 ISGYVQNGDA-EEGLKLFVRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKN 288
I GY Q+G EE ++LF RM E G +E T A L AC + +H +V+K
Sbjct: 336 ICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKR 395
Query: 289 GLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHF 348
+ SN FV + ++D+Y + M+ A ++ + +R+ S +++I G +QG + EA F
Sbjct: 396 DMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEA---F 452
Query: 349 DSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAAL 408
+ E + A + E + + V + + + + L+ LL CA+ AA
Sbjct: 453 QLVREMQLPS---------SAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAP 503
Query: 409 HPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACY 468
GKEIH Y +R ++ D + S LVDMY+KCG + A +F R+++ +NV+I Y
Sbjct: 504 ARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIMAY 563
Query: 469 AHHGHEEKAILLFEEMLEKG-IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISP 527
HG ++A+ LF+ M+ G P+ VTF+A L+A H G V+ G + F M DY P
Sbjct: 564 GMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFEP 623
Query: 528 ETDHYACMIDLYGRANQLEKAIEFMKSI-PTEEDAVILGSFLNVCRLNRNAELAGEAEEK 586
+AC++D+ GRA +L++A + S+ P E + L CRL+RN +L A E+
Sbjct: 624 TPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACRLHRNVKLGRIAAER 683
Query: 587 LLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTV 646
L LE + + YV L N+Y+A G W +R MR + GCSW+ ++ IH F
Sbjct: 684 LFELEPDEASHYVLLCNIYSAAGLWENSTEVRGMMRQRGVAKEPGCSWIELDGAIHRFMA 743
Query: 647 GDVSHPKTNAIYS 659
G+ +HP++ +++
Sbjct: 744 GESAHPESAQVHA 756
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 173/402 (43%), Gaps = 59/402 (14%)
Query: 218 QPELNDAVSWNTLISG---YVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRN 274
P+L DAVS+N+LIS + + G A + L+ + E + T S L AC L +
Sbjct: 112 PPDLRDAVSYNSLISALCLFRRWGHALDALRDMLADHEV----SSFTLVSVLLACSHLAD 167
Query: 275 V--KCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMI 332
+ +E H++ LK+G + KG R F ++++
Sbjct: 168 QGHRLGREAHAFALKHGFLD---------------------------KG-RERFPFNALL 199
Query: 333 VGYSLQGNMEEARRHFDSLTE--KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVT 390
Y+ G +++A+R F S ++V W + S V+ CE +L + V GV
Sbjct: 200 SMYARLGLVDDAQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVAL-GVRP 258
Query: 391 DALILVILLGACALQAALHPGKEIHAYILR-MGVQMDKKLISTLVDMYSKCGNMTYAEII 449
D + L AC+ L G+E+HA++L+ + + + S LVDMY+ +++A +
Sbjct: 259 DGVTFASALPACSRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYASNEQVSHARRV 318
Query: 450 FQNFIE--RDLVLYNVMIACYAHHGH-EEKAILLFEEM-LEKGIKPDAVTFVAILSAFRH 505
F E R L ++N MI YA HG +E+AI LF M E G P T +L A
Sbjct: 319 FDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPA--- 375
Query: 506 CGSVEM--GEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE---- 559
C E+ G++ + ++ ++D+Y R ++++A I +
Sbjct: 376 CARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSW 435
Query: 560 -----DAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKA 596
++ G +L R +L A LEG++ +
Sbjct: 436 NTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTS 477
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 146/344 (42%), Gaps = 55/344 (15%)
Query: 7 KEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISAC 66
KEA+ H +K + N L+ +Y++ + E+ +F + R++ SWNT+I+ C
Sbjct: 385 KEAV--HGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGC 442
Query: 67 IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSAD-EHIRMDE 125
I + +A L +++ +S G EG + S D + +
Sbjct: 443 IVQGLISEAFQLV-----REMQLPSSAASGETMLEGDD----------TSVDGQRCMPNN 487
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
T+ + L C L G+++H + V+ + ++ S+L+DMY+KC C
Sbjct: 488 ITLMTLLPGCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGC---------- 537
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
+ +A F R P N ++WN LI Y +G +E L
Sbjct: 538 ----------------------LALARAVFDRLPRRN-VITWNVLIMAYGMHGLGDEALA 574
Query: 246 LFVRMGENG-VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKN-GLISNPFVSSGIVDV 303
LF RM NG NE TF +AL+AC V E+ + ++ G P++ + +VDV
Sbjct: 575 LFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFEPTPYLHACVVDV 634
Query: 304 YCKCENMNYAESML--LLKGVRNSFSISSMIVGYSLQGNMEEAR 345
+ ++ A ++ + G + S+M+ L N++ R
Sbjct: 635 LGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACRLHRNVKLGR 678
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 144/341 (42%), Gaps = 43/341 (12%)
Query: 261 TFASALSACCGLRNVKCAKEIHSWVLKNGLI--SNPFVSSGIVDVYCKCENMNYAESMLL 318
A+ + LR+ + + IH L+ L+ P VS+ ++ Y +C
Sbjct: 50 ALPPAIKSAAALRDSRSTRAIHGASLRRALLHRPTPAVSNALLTAYARC----------- 98
Query: 319 LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDL 378
G ++ L+ D+++ +++ LF + A +AL D+
Sbjct: 99 --GDLDAALALFAATPPDLR----------DAVSYNSLISALCLFRRWGHA--LDALRDM 144
Query: 379 LSEFVTKEGVVTDALILVILLGACALQAALHP-GKEIHAYILRMGVQMDKK----LISTL 433
L++ V+ ++ +LL L H G+E HA+ L+ G +DK + L
Sbjct: 145 LADHE-----VSSFTLVSVLLACSHLADQGHRLGREAHAFALKHGF-LDKGRERFPFNAL 198
Query: 434 VDMYSKCGNMTYAEIIF--QNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
+ MY++ G + A+ +F DLV +N MI+ G E+A+ + +M+ G++P
Sbjct: 199 LSMYARLGLVDDAQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRP 258
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
D VTF + L A + +G + + D ++ + + ++D+Y Q+ A
Sbjct: 259 DGVTFASALPACSRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYASNEQVSHARRV 318
Query: 552 MKSIPTEEDAVILGSF-LNVCRLNRNAELAGEAEEKLLRLE 591
+P E LG + +C ++ + EA E R+E
Sbjct: 319 FDMVP--EHGRQLGMWNAMICGYAQHGGMDEEAIELFSRME 357
>gi|147767158|emb|CAN71514.1| hypothetical protein VITISV_021786 [Vitis vinifera]
Length = 690
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 203/647 (31%), Positives = 314/647 (48%), Gaps = 64/647 (9%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +I+ GL T N L+ Y+K L +++F+E+ +V+SW T++SAC K +
Sbjct: 82 HAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQRVFNEIENPDVYSWTTLLSACTKLGQI 141
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
A LF+ +P V +N+++ G + E AL LF EM +R D++T S L
Sbjct: 142 GYACHLFNQTPRMIPVVWNAIITGCAENKHTEI-ALNLFREMHQLG--VRHDKYTFASVL 198
Query: 133 NLC-VKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
+LC ++LL+ FGR++H ++KT +++L+ MY +A VFE V+
Sbjct: 199 SLCSLELLD--FGREVHTLVIKTGFLVRASVINALLTMYFNSGKVADAYEVFEEAESTVH 256
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
D +++N +I G G EE L +F M
Sbjct: 257 -------------------------------DDITFNVMIGGLASVGRDEEALIMFKEMQ 285
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
E +R E TF S +S+C R + ++H+ +K G + VS+ + +Y C N++
Sbjct: 286 EACLRPTELTFVSVMSSCSSAR---VSHQVHAQAIKMGFEACTPVSNAAMTMYSSCGNLH 342
Query: 312 ------------YAESML-LLKGVRNSFSISSMIVGYSLQGNME--EARRHFDSLTEKN- 355
Y ++L L+ R +G SL + E E + F +L KN
Sbjct: 343 AVHMVFDRLGNFYRLAILAFLQMQRAGIEPDEFTIG-SLLASSESLEIVKMFQALVSKNG 401
Query: 356 ----VVVWTALFSGYVKAQNCEALFDLLSEF--VTKEGVVTDALILVILLGACALQAALH 409
+ V AL S + K E + L +F + + +A L I+L CA +AL
Sbjct: 402 LNSKIEVSNALVSAFSKHGQIEQAYQGLEQFYELLMSTLKPNAYTLSIVLSICASISALR 461
Query: 410 PGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYA 469
GK+IH YILR GV L + L+ MY+KCG++ ++ IF RD+V +N MI+ YA
Sbjct: 462 HGKQIHGYILRSGVFSVTSLGNALITMYAKCGDLDWSLRIFNVMNGRDIVSWNAMISAYA 521
Query: 470 HHGHEEKAILLFEEMLEKG-IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE 528
HG ++A+ F+ M + G +KPD TF A+LSA H G V+ G + FNSM DY P
Sbjct: 522 QHGKGKEAVHFFKAMQDSGGVKPDQATFTAVLSACSHAGLVDDGTRIFNSMVNDYGFEPG 581
Query: 529 TDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLL 588
DH +C++DL GRA LE+A + S + + I + + C + N L LL
Sbjct: 582 ADHLSCIVDLLGRAGYLEEAERLINSKHLKIVSSIWWTLFSACAAHGNLRLGRIVAGFLL 641
Query: 589 RLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWV 635
+E N+ A YV L+N+YAA G W E R M+ + + GCSW+
Sbjct: 642 EIEQNDPAVYVLLSNIYAAAGQWEEAANTRDLMQKTRVAKQPGCSWI 688
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 120/503 (23%), Positives = 222/503 (44%), Gaps = 85/503 (16%)
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
+ L+ N +L + + + +++LF+++ S++ +++ D FT++STL C L G
Sbjct: 21 EQLIKINQLLAELTRSH-HNSASVQLFVQIHSSN-YLKPDHFTLSSTLTACANLRYAASG 78
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
QLHA+ ++T A ++L+ Y+K + RVF E ++ S +++AC +
Sbjct: 79 NQLHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQRVFNE-IENPDVYSWTTLLSACTK 137
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFAS 264
G++ A F + P + V WN +I+G +N E L LF M + GVR +++TFAS
Sbjct: 138 LGQIGYACHLFNQTPRMIPVV-WNAIITGCAENKHTEIALNLFREMHQLGVRHDKYTFAS 196
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNG----------LISNPFVSSGIVDVYCKCENMNYAE 314
LS C L + +E+H+ V+K G L++ F S + D Y E AE
Sbjct: 197 VLS-LCSLELLDFGREVHTLVIKTGFLVRASVINALLTMYFNSGKVADAY---EVFEEAE 252
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEA 374
S V + + + MI G + G EEA F + E C
Sbjct: 253 ST-----VHDDITFNVMIGGLASVGRDEEALIMFKEMQEA-----------------C-- 288
Query: 375 LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLV 434
+ L V ++ +C+ H ++HA ++MG + + + +
Sbjct: 289 -------------LRPTELTFVSVMSSCSSARVSH---QVHAQAIKMGFEACTPVSNAAM 332
Query: 435 DMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAV 494
MYS CGN+ ++F +R Y + AIL F +M GI+PD
Sbjct: 333 TMYSSCGNLHAVHMVF----DRLGNFYRL-------------AILAFLQMQRAGIEPDEF 375
Query: 495 TFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKS 554
T ++L++ V+M F ++ + ++ + + ++ + + Q+E+A + ++
Sbjct: 376 TIGSLLASSESLEIVKM----FQALVSKNGLNSKIEVSNALVSAFSKHGQIEQAYQGLEQ 431
Query: 555 I------PTEEDAVILGSFLNVC 571
+ +A L L++C
Sbjct: 432 FYELLMSTLKPNAYTLSIVLSIC 454
>gi|357128066|ref|XP_003565697.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Brachypodium distachyon]
Length = 564
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 179/612 (29%), Positives = 295/612 (48%), Gaps = 70/612 (11%)
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
T+I + L+ AR++FD P +D+V + +ML GY + G + AL LF M +A
Sbjct: 8 TLIKSLCAGGALRHARAVFDEMPDRDVVAWTAMLSGYA-SNGCHSYALDLFRRMLAAG-- 64
Query: 121 IRMDEFTVTSTLNLCVKLLNVGF--GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEE 178
+ +EFT++S L C G LHA V+ D + V++LI+ Y+ C EE
Sbjct: 65 VGPNEFTLSSVLTACRGGAADGGCEPSSLHAVAVRRGVDHMPYVVNALIEAYASC---EE 121
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
V E + K F A SW ++++GY + G
Sbjct: 122 GVGV--------------------------EESRKLFDALGSGRTAASWTSMVAGYSRWG 155
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
+ GL+LF M ++G+ + T + AL AC + N+ +++H L+ +N V++
Sbjct: 156 QEQTGLQLFQTMIQDGIELSPFTCSIALHACASIANLCVGQQLHVLCLRKAFNANLTVAN 215
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
++D+YC C N+ +ARR FD + E+N+V
Sbjct: 216 SLIDMYCSC-------------------------------ANLLDARRLFDEIPERNLVT 244
Query: 359 WTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
W + + Y + + AL LL E + T L + ACA A+L G+++H
Sbjct: 245 WNTMIAWYSQCNHLMAL-QLLREMNLQPNCFT----LTSITSACAGLASLRFGQQVHGAA 299
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
LR D ++ + LVDMYSKCG++ A+ +F +D + + MI Y +G+ ++I
Sbjct: 300 LRRNYGKDLQMCNALVDMYSKCGSIANAKKMFNMMDYKDKLSWTSMITGYGMNGYANESI 359
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
LF M+ G+ PD V F+ ++ A H G V+ G +F SMT++Y + P + Y C+ +L
Sbjct: 360 QLFTSMIHAGVHPDHVVFLGLICACNHGGLVDEGWNFFRSMTSEYNLQPNKEIYGCVTNL 419
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARY 598
RA +L +A + + +P D + G+ L C++++N EL A K++ + + Y
Sbjct: 420 LARAGRLREAFDLIHRMPFAPDETVWGALLGACKMHKNVELGRLAARKIIEINPDRAKTY 479
Query: 599 VQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
V LAN+YAA W E R+ +RG+ + AG SW+ V +I+ FT D S P+ +
Sbjct: 480 VLLANIYAAGNKWGEYADTRRLLRGIGSRKEAGTSWIDVTDKIYSFTTADSSSPQVSLAD 539
Query: 659 SVLAIFTGELYE 670
VL I ++E
Sbjct: 540 EVLQILARHMHE 551
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 153/337 (45%), Gaps = 48/337 (14%)
Query: 45 RKLFDEMPERNVFSWNTIISA---CIKSHDLKQARSLFDS-SPHKDLVTYNSMLCGYINA 100
R+ D MP + N +I A C + ++++R LFD+ + ++ SM+ GY +
Sbjct: 99 RRGVDHMP----YVVNALIEAYASCEEGVGVEESRKLFDALGSGRTAASWTSMVAGY-SR 153
Query: 101 EGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASG 160
G E L+LF M + I + FT + L+ C + N+ G+QLH ++ + +A+
Sbjct: 154 WGQEQTGLQLFQTM--IQDGIELSPFTCSIALHACASIANLCVGQQLHVLCLRKAFNANL 211
Query: 161 FAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPE 220
+SLIDMY C +A R+F +E+ PE
Sbjct: 212 TVANSLIDMYCSCANLLDARRLF----DEI----------------------------PE 239
Query: 221 LNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKE 280
N V+WNT+I+ Y Q L + E ++ N T S SAC GL +++ ++
Sbjct: 240 RN-LVTWNTMIAWYSQCNH----LMALQLLREMNLQPNCFTLTSITSACAGLASLRFGQQ 294
Query: 281 IHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGN 340
+H L+ + + + +VD+Y KC ++ A+ M + ++ S +SMI GY + G
Sbjct: 295 VHGAALRRNYGKDLQMCNALVDMYSKCGSIANAKKMFNMMDYKDKLSWTSMITGYGMNGY 354
Query: 341 MEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFD 377
E+ + F S+ V +F G + A N L D
Sbjct: 355 ANESIQLFTSMIHAGVHPDHVVFLGLICACNHGGLVD 391
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 111/260 (42%), Gaps = 75/260 (28%)
Query: 10 LICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKS 69
++C +A A LT+ N LI +Y L ++R+LFDE+PERN+ +WNT+I+ +
Sbjct: 200 VLCLRKAFNANLTVA----NSLIDMYCSCANLLDARRLFDEIPERNLVTWNTMIAWYSQC 255
Query: 70 HDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVT 129
+ L AL+L EM +++ + FT+T
Sbjct: 256 NHLM---------------------------------ALQLLREM-----NLQPNCFTLT 277
Query: 130 STLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEE 189
S + C L ++ FG+Q+H ++ + ++L+DMYSKC A ++F
Sbjct: 278 SITSACAGLASLRFGQQVHGAALRRNYGKDLQMCNALVDMYSKCGSIANAKKMF------ 331
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
N M + D +SW ++I+GY NG A E ++LF
Sbjct: 332 ------NMM---------------------DYKDKLSWTSMITGYGMNGYANESIQLFTS 364
Query: 250 MGENGVRWNEHTFASALSAC 269
M GV + F + AC
Sbjct: 365 MIHAGVHPDHVVFLGLICAC 384
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 98/240 (40%), Gaps = 20/240 (8%)
Query: 329 SSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGV 388
+++I G + AR FD + +++VV WTA+ SGY DL + GV
Sbjct: 7 TTLIKSLCAGGALRHARAVFDEMPDRDVVAWTAMLSGYASNGCHSYALDLFRRMLAA-GV 65
Query: 389 VTDALILVILLGAC---ALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTY 445
+ L +L AC A P +HA +R GV +++ L++ Y+ C
Sbjct: 66 GPNEFTLSSVLTACRGGAADGGCEP-SSLHAVAVRRGVDHMPYVVNALIEAYASCEEGVG 124
Query: 446 AEIIFQNFIE----RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
E + F R + M+A Y+ G E+ + LF+ M++ GI+ T L
Sbjct: 125 VEESRKLFDALGSGRTAASWTSMVAGYSRWGQEQTGLQLFQTMIQDGIELSPFTCSIALH 184
Query: 502 AFRHCGSVEMGEKYF-----NSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIP 556
A ++ +G++ + A+ ++ +ID+Y L A IP
Sbjct: 185 ACASIANLCVGQQLHVLCLRKAFNANLTVANS------LIDMYCSCANLLDARRLFDEIP 238
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%)
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
M +K +TL+ G + +A +F +RD+V + M++ YA +G A+ LF M
Sbjct: 1 MAQKHATTLIKSLCAGGALRHARAVFDEMPDRDVVAWTAMLSGYASNGCHSYALDLFRRM 60
Query: 485 LEKGIKPDAVTFVAILSAFR 504
L G+ P+ T ++L+A R
Sbjct: 61 LAAGVGPNEFTLSSVLTACR 80
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 183/625 (29%), Positives = 312/625 (49%), Gaps = 60/625 (9%)
Query: 51 MPERNVFSWNTIISACIK-SHDLKQARSLFDSSPHKDLVTYNSMLCGY--INAEGYEADA 107
+ ++F II C K S D+ AR +FD P + +N+M+ GY IN
Sbjct: 63 LSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIPQPSVFIWNTMIKGYSRINCSESGVSL 122
Query: 108 LKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQL------HAFMVKTSNDASGF 161
KL + +I+ D FT L K + + +G+ L H F+ D++ F
Sbjct: 123 YKLMLV-----HNIKPDGFTFPFLLKGFTKDMALKYGKVLLNHAVIHGFL-----DSNLF 172
Query: 162 AVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPEL 221
I ++S C A ++F+ + W
Sbjct: 173 VQKGFIHLFSLCGLVNYARKIFD---------------------------MGDGW----- 200
Query: 222 NDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG--VRWNEHTFASALSACCGLRNVKCAK 279
+ V+WN ++SGY + EE +LF+ M + V N T LSAC L+++ K
Sbjct: 201 -EVVTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGK 259
Query: 280 EIHSWVLKNGLI-SNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQ 338
I++ +K G++ N + + ++D++ C M+ A + R+ S +S++ G++
Sbjct: 260 CIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANT 319
Query: 339 GNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVIL 398
++ AR++FD + E++ V WTA+ GY++ + + L + + V D +V +
Sbjct: 320 CRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRD-MQMSNVKPDEFTMVSI 378
Query: 399 LGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDL 458
L ACA AL G+ YI + ++ D + + L+DMY KCGN+ A+ IF ++D
Sbjct: 379 LTACAHLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDK 438
Query: 459 VLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNS 518
+ MI A++GH E+A+ +F MLE + PD +T++ ++ A H G V G+ +F++
Sbjct: 439 FTWTAMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIGVMCACTHVGLVAKGKHFFSN 498
Query: 519 MTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAE 578
M + I P HY CM+DL GRA L++A+E + ++P + ++++ GS L CR+++N +
Sbjct: 499 MAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMPVKPNSIVWGSLLGACRVHKNVQ 558
Query: 579 LAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVY 636
LA A ++L LE N A YV L N+YAA W + +RK M RG+K + GCS +
Sbjct: 559 LAEMAANEILELEPENGAVYVLLCNIYAACKKWKNLHNVRKMMMERGIK--KIPGCSLME 616
Query: 637 VEHEIHIFTVGDVSHPKTNAIYSVL 661
+ ++ F GD SHP++ IY+ L
Sbjct: 617 MNGIVYEFVAGDKSHPQSKEIYAKL 641
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 148/331 (44%), Gaps = 39/331 (11%)
Query: 17 IKAGLT-LTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQA 75
IK G+ I N LI +++ + +R +FDEM R+V SW +I++ + + A
Sbjct: 266 IKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLA 325
Query: 76 RSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLC 135
R FD P +D V++ +M+ GY+ ++ + L LF +MQ ++ ++ DEFT+ S L C
Sbjct: 326 RKYFDQMPERDYVSWTAMIDGYLRMNRFK-EVLTLFRDMQMSN--VKPDEFTMVSILTAC 382
Query: 136 VKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISK 195
L + G ++ K F ++LIDMY KC E+A ++F
Sbjct: 383 AHLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFN----------- 431
Query: 196 NAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGV 255
EM K D +W +I G NG EE L +F M E V
Sbjct: 432 -------------EMQKK---------DKFTWTAMIVGLANNGHGEEALTMFSYMLEASV 469
Query: 256 RWNEHTFASALSACCGLRNVKCAKEIHS-WVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
+E T+ + AC + V K S +++G+ N +VD+ + ++ A
Sbjct: 470 TPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEAL 529
Query: 315 SMLLLKGVR-NSFSISSMIVGYSLQGNMEEA 344
+++ V+ NS S++ + N++ A
Sbjct: 530 EVIMNMPVKPNSIVWGSLLGACRVHKNVQLA 560
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Query: 413 EIHAYILRMGVQMDKKLISTLVDM--YSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
+IH+ ++ G+ + ++ ++ + G++ YA +F + + ++N MI Y+
Sbjct: 53 QIHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIPQPSVFIWNTMIKGYSR 112
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFN 517
E + L++ ML IKPD TF +L F +++ G+ N
Sbjct: 113 INCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKVLLN 159
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 180/614 (29%), Positives = 308/614 (50%), Gaps = 53/614 (8%)
Query: 57 FSWNTIISACIKS--HDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
F+ + +I+ C S DL ++ ++ + + ++N + G++++E +A+ L+ +
Sbjct: 11 FASSRLIAFCAISEWRDLDYCTNILFNTRNPNTFSWNVAIRGFLDSEN-PREAVVLYKRV 69
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
D + D +T C +L + G ++ ++ D+ F +++I + C
Sbjct: 70 LQCD-GTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCG 128
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
+ A ++F+ +C R D VSWN++I+GY
Sbjct: 129 DLDGARKMFD---------------KSCVR------------------DLVSWNSMINGY 155
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
V+ G A E L + M G++ +E T +S+C L ++ +E H ++ +NGL
Sbjct: 156 VRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTV 215
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
+++ ++D+Y KC N+ A + + S ++M+ FD + +K
Sbjct: 216 PLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTML---------------FDEMPDK 260
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
+VV W A+ GYV A + L +E + + D + +V L AC+ AL G I
Sbjct: 261 DVVPWNAMIGGYVHANRGKEALALFNE-MQAMNINPDEVTMVSCLSACSQLGALDVGIWI 319
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
H YI + + ++ L + L+DMY+KCG +T A +FQ R+ + + +I+ A HG+
Sbjct: 320 HHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNA 379
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC 534
AI F EM++ + PD VTF+ +LSA H G VE G KYF+ M++ + +SP+ HY+C
Sbjct: 380 HGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSC 439
Query: 535 MIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNN 594
M+DL GRA LE+A E +KS+P E DAV+ G+ CR++ N + A KLL+++ ++
Sbjct: 440 MVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHD 499
Query: 595 KARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKT 654
YV LAN+Y W E G+ RK MR + GCS + V ++ F V D SHP++
Sbjct: 500 SGIYVLLANMYGEAEMWKEAGKXRKLMRQRGVEKTPGCSSIEVNGIVYEFIVRDKSHPQS 559
Query: 655 NAIYSVLAIFTGEL 668
IY L T +L
Sbjct: 560 EQIYECLIQLTRQL 573
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 142/602 (23%), Positives = 255/602 (42%), Gaps = 88/602 (14%)
Query: 1 MRSLNLKEALICHVQAIKA-GLTLTTITTNQLIHIYSKHNLLRESRKLFDEMP----ERN 55
+ S N +EA++ + + ++ G T L ++ +L+R ++ + + +
Sbjct: 54 LDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSD 113
Query: 56 VFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQ 115
+F N +I + DL AR +FD S +DLV++NSM+ GY+ G+ +AL + EM+
Sbjct: 114 IFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVR-RGWAYEALNFYREMK 172
Query: 116 SADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRC 175
E I+ DE T+ ++ C +L ++ GR+ H ++ + + ++L+DMY KC
Sbjct: 173 V--EGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGN 230
Query: 176 YEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYV 235
E A ++F+ T + ++S M+ F P+ D V WN +I GYV
Sbjct: 231 LESARKLFDSMTNKT-MVSWTTML---------------FDEMPD-KDVVPWNAMIGGYV 273
Query: 236 QNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF 295
+E L LF M + +E T S LSAC L + IH ++ K+ L N
Sbjct: 274 HANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVA 333
Query: 296 VSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKN 355
+ + ++D+Y KC + A + RNS + +++I G +L GN A +F + + +
Sbjct: 334 LGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNS 393
Query: 356 VVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIH 415
V+ D + + LL AC + G++
Sbjct: 394 --------------------------------VMPDEVTFLGLLSACCHGGLVEEGRKYF 421
Query: 416 AYI-LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVM-IACYAH-- 470
+ + + + K S +VD+ + G + AE + ++ IE D V++ + AC H
Sbjct: 422 SQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGN 481
Query: 471 --------------HGHEEKAILLF------EEMLEKGIKPDAVTFVAILSAFRHCGSVE 510
H+ +L EM ++ K + + C S+E
Sbjct: 482 VLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKXRKLMRQRGVEKTPGCSSIE 541
Query: 511 MGEKYFNSMTADYKISPETDH-YACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLN 569
+ + + D K P+++ Y C+I L QLE +E P D + GS
Sbjct: 542 VNGIVYEFIVRD-KSHPQSEQIYECLIQL---TRQLE-LVECTPVFPIFGDNSLFGSDFG 596
Query: 570 VC 571
C
Sbjct: 597 RC 598
>gi|449463631|ref|XP_004149535.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 741
Score = 288 bits (736), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 197/627 (31%), Positives = 316/627 (50%), Gaps = 67/627 (10%)
Query: 25 TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPH 84
T+ N LI Y+K L RE++KLFDEM +NV SWN+I+S K+ ++ F++
Sbjct: 140 TVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFFEAMGE 199
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
+++V++N M+ GY VG G
Sbjct: 200 RNVVSWNLMVDGY-------------------------------------------VGVG 216
Query: 145 RQLHAFM----VKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVA 200
A+M + T N S + S Y + EA +F + NL+S NAM+
Sbjct: 217 DLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRM---TEARNLFNEMPTK-NLVSWNAMIG 272
Query: 201 ACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEH 260
A RE +++ A K F PE D+VSW +I+GYV+ G + ++ M +
Sbjct: 273 AYVRENQIDDAYKLFMEMPE-KDSVSWTAMINGYVRVGKLLQAREILNLMPYKNIAAQTA 331
Query: 261 TFASALSACCGLRNVKCAKEIHSWV-LKNGLISNPFVSSGIVDVYCKCENMNYAESMLLL 319
L + + A EI S + +++ + N ++ Y C + A +
Sbjct: 332 MINGYLQSG----RMDEANEIFSQISVRDSVCWNSMITG-----YAHCGRTDEALRLFQE 382
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLL 379
++ S ++MI Y+ G M++A F+ + E+NVV W +L +GYV QN F+ L
Sbjct: 383 MVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQERNVVSWNSLITGYV--QNG-LYFEAL 439
Query: 380 SEFV--TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMY 437
+ F+ ++G D +V L A A AAL+ G ++H ++ G D + + ++ MY
Sbjct: 440 NCFILMKQQGEKPDQTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLFVKNAILTMY 499
Query: 438 SKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFV 497
+K G + AE +F +D+V +N +IA YA +G ++A+ LFE M +GI PD VTF
Sbjct: 500 AKSGRVPEAENVFAEIKNKDVVSWNSLIAGYALNGCGKEAVELFEVMPLRGIIPDEVTFT 559
Query: 498 AILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPT 557
+LSA H G V+ G F SMT Y I P+++HYAC+I+L GR +LE+A+E ++ + T
Sbjct: 560 GLLSACNHGGFVDQGLNLFKSMTETYSIKPQSEHYACVINLLGRVGRLEEAVEIVQGMKT 619
Query: 558 EEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRI 617
A I G+ L CR++ N ELA + E+LL LE N + YV L+N++A G W + R+
Sbjct: 620 VSSAKIWGALLWACRIHHNLELAKYSAERLLALEPQNASNYVLLSNMHAEAGRWDMVERV 679
Query: 618 RKQMRGMKGNRFAGCSWVYVEHEIHIF 644
R M+ K + GCSW+ +++++H F
Sbjct: 680 RVLMKENKAEKQPGCSWIEIDNQLHCF 706
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 206/472 (43%), Gaps = 80/472 (16%)
Query: 56 VFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQ 115
VF+ N IS +S +++A ++F +++VTYNSM+ Y G A+A +LF ++
Sbjct: 15 VFTQNLRISQLGRSGRIEEAVAVFLQMTERNIVTYNSMISAYAK-NGRIANARELF-DLM 72
Query: 116 SADEHIRMDEFTVTSTLNLCV----KLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYS 171
+ + N V +L + F R ++++ + +I Y+
Sbjct: 73 PQRNLVSWNSMIAGYLHNELVEDAARLFDRMFKRDIYSWTL-------------MITCYT 119
Query: 172 KCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLI 231
+ E+A +F ++ + + +NA++A ++ A K F + + + VSWN+++
Sbjct: 120 RIGELEKARELFNLLPDKQDTVCRNALIAGYAKKRLFREAKKLF-DEMLVKNVVSWNSIL 178
Query: 232 SGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI 291
SGY +NG + GL+ F MGE RNV SW L
Sbjct: 179 SGYTKNGKMQLGLQFFEAMGE--------------------RNVV------SWNL----- 207
Query: 292 SNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL 351
+VD Y +++ A N S +M+ G++ G M EAR F+ +
Sbjct: 208 --------MVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLFNEM 259
Query: 352 TEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAA---- 407
KN+V W A+ YV+ + + L E K+ V A+I + LQA
Sbjct: 260 PTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKLLQAREILN 319
Query: 408 LHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIAC 467
L P K I A + +++ Y + G M A IF RD V +N MI
Sbjct: 320 LMPYKNIAAQ-------------TAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITG 366
Query: 468 YAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSM 519
YAH G ++A+ LF+EM+ K D V++ +++A+ G ++ + FN M
Sbjct: 367 YAHCGRTDEALRLFQEMVCK----DMVSWNTMIAAYAQAGQMDKALEMFNEM 414
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H IK G N ++ +Y+K + E+ +F E+ ++V SWN++I+ +
Sbjct: 477 HHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKNKDVVSWNSLIAGYALNGCG 536
Query: 73 KQARSLFDSSPHK----DLVTYNSMLCGYINAEGYEADALKLFIEM 114
K+A LF+ P + D VT+ +L N G+ L LF M
Sbjct: 537 KEAVELFEVMPLRGIIPDEVTFTGLLSA-CNHGGFVDQGLNLFKSM 581
>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 288 bits (736), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 192/669 (28%), Positives = 314/669 (46%), Gaps = 115/669 (17%)
Query: 67 IKSHDLKQARSLFDSSPHKDLV-TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
+K D+ AR +FD+ P K V +N ++ GY A +E ++L LF +M I DE
Sbjct: 354 VKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFE-ESLLLFEQMHELG--ITPDE 410
Query: 126 FTVTSTLNLCVKLLNVGF-GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
++ L C+ L+ G H ++VK ++LI Y+K + A VF+
Sbjct: 411 HALSCLLK-CITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFD 469
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
R P D +SWN++ISG NG E +
Sbjct: 470 --------------------------------RMPH-QDTISWNSVISGCTSNGLNSEAI 496
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
+LFVRM G + T S L AC + +H + +K GLI +++ ++D+Y
Sbjct: 497 ELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMY 556
Query: 305 CKCENMNYAESM----------------------------------LLLKGVR-NSFSIS 329
C + + + ++L G++ + F+++
Sbjct: 557 SNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVT 616
Query: 330 SMIVGY----------SLQG-------------------------NMEEARRHFDSLTEK 354
S++ G+ S+ G NMEEAR FD +T K
Sbjct: 617 SVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNK 676
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
+++ W L GY + F L S+ + + + + + +L A A ++L G+EI
Sbjct: 677 DIISWNTLIGGYSRNNFANESFSLFSDMLLQ--FKPNTVTMTCILPAVASISSLERGREI 734
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
HAY LR G D + LVDMY KCG + A ++F +++L+ + +MIA Y HG
Sbjct: 735 HAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCG 794
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC 534
+ A+ LFE+M G++PD +F AIL A H G G K+FN+M +YKI P+ HY C
Sbjct: 795 KDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTC 854
Query: 535 MIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNN 594
++DL L++A EF++S+P E D+ I S L+ CR++R+ +LA + +++ +LE N
Sbjct: 855 IVDLLSHTGNLKEAFEFIESMPIEPDSSIWVSLLHGCRIHRDVKLAEKVADRVFKLEPEN 914
Query: 595 KARYVQLANVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
YV LAN+YA W + +++ ++ RG++ N GCSW+ V ++H+F + +HP
Sbjct: 915 TGYYVLLANIYAEAERWEAVKKLKNKIGGRGLREN--TGCSWIEVRGKVHVFIADNRNHP 972
Query: 653 KTNAIYSVL 661
+ N I L
Sbjct: 973 EWNRIAEFL 981
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 116/445 (26%), Positives = 192/445 (43%), Gaps = 64/445 (14%)
Query: 62 IISACIKSHDLKQARSLFDSSPHK--DLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
++ A +K DL AR +FD P + D+ + S++ Y A ++ + + LF +MQ
Sbjct: 136 LVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQ-EGVSLFRQMQCCG- 193
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
+ D V+ L L ++ G +H + K + ++LI +YS+C C E+A
Sbjct: 194 -VSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDA 252
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
+VF+ +M A DA+SWN+ ISGY NG
Sbjct: 253 MQVFD------------SMHA---------------------RDAISWNSTISGYFSNGW 279
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISN-PFVSS 298
+ + LF +M G + T S L AC L K +H + +K+GL+ + V S
Sbjct: 280 HDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQS 339
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK-NVV 357
GI + S ++ Y G+M ARR FD++ K NV
Sbjct: 340 GIDEALG-----------------------SKLVFMYVKCGDMGSARRVFDAMPSKGNVH 376
Query: 358 VWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
VW + GY KA E LL E + + G+ D L LL + G H Y
Sbjct: 377 VWNLIMGGYAKAAEFEESL-LLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGY 435
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
++++G + + L+ Y+K + A ++F +D + +N +I+ +G +A
Sbjct: 436 LVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEA 495
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSA 502
I LF M +G + D+ T +++L A
Sbjct: 496 IELFVRMWMQGHELDSTTLLSVLPA 520
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 126/510 (24%), Positives = 209/510 (40%), Gaps = 91/510 (17%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
++ E + H K GL N LI +YS+ + ++ ++FD M R+ SWN+ IS
Sbjct: 213 SITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTIS 272
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
GY + G+ A+ LF +M S E +
Sbjct: 273 -------------------------------GYF-SNGWHDRAVDLFSKMWS--EGTEIS 298
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
TV S L C +L G+ +H + +K SG L D+ S +EA
Sbjct: 299 SVTVLSVLPACAELGFELVGKVVHGYSMK-----SGL----LWDLESVQSGIDEA----- 344
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
L SK + C G+M A + F P + WN ++ GY + + EE L
Sbjct: 345 -------LGSKLVFMYVKC--GDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESL 395
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
LF +M E G+ +EH + L L + H +++K G + V + ++ Y
Sbjct: 396 LLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFY 455
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
K S+MI + A FD + ++ + W ++ S
Sbjct: 456 AK----------------------SNMI---------DNAVLVFDRMPHQDTISWNSVIS 484
Query: 365 GYVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
G N EA+ + ++ +G D+ L+ +L ACA G+ +H Y ++ G+
Sbjct: 485 GCTSNGLNSEAIELFVRMWM--QGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGL 542
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
+ L + L+DMYS C + IF+N ++++V + MI Y G +K L +E
Sbjct: 543 IGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQE 602
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
M+ GIKPD ++L F S++ G+
Sbjct: 603 MVLDGIKPDVFAVTSVLHGFAGDESLKQGK 632
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 121/278 (43%), Gaps = 39/278 (14%)
Query: 228 NTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWV-L 286
N I Q GD L+L G GVR ++ + + C R+++ A+ H+ V
Sbjct: 67 NLRIQRLCQAGDLAAALRLLGSDGGVGVR----SYCAVVQLCGEERSLEAARRAHALVRA 122
Query: 287 KNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARR 346
G I + +V Y KC G++ AR
Sbjct: 123 GTGGIIGSVLGKRLVLAYLKC-------------------------------GDLGGARM 151
Query: 347 HFDSLTEK--NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACAL 404
FD + + +V VWT+L S Y KA + + L + GV DA + +L A
Sbjct: 152 VFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCC-GVSPDAHAVSCVLKCIAS 210
Query: 405 QAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVM 464
++ G+ IH + ++G+ + + L+ +YS+CG M A +F + RD + +N
Sbjct: 211 LGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNST 270
Query: 465 IACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
I+ Y +G ++A+ LF +M +G + +VT +++L A
Sbjct: 271 ISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPA 308
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 110/266 (41%), Gaps = 68/266 (25%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+LK+ H AI+ G+ N L+ +Y + E+R +FD + +++ SWNT+I
Sbjct: 627 SLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIG 686
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
+++ ++ SLF +D L F + +
Sbjct: 687 GYSRNNFANESFSLF-------------------------SDMLLQF----------KPN 711
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
T+T L + ++ GR++HA+ ++ + ++L+DMY KC A +F+
Sbjct: 712 TVTMTCILPAVASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFD 771
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
T++ NLI SW +I+GY +G ++ +
Sbjct: 772 RLTKK-NLI--------------------------------SWTIMIAGYGMHGCGKDAV 798
Query: 245 KLFVRMGENGVRWNEHTFASALSACC 270
LF +M +GV + +F++ L ACC
Sbjct: 799 ALFEQMRGSGVEPDTASFSAILYACC 824
>gi|242084292|ref|XP_002442571.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
gi|241943264|gb|EES16409.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
Length = 698
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 183/616 (29%), Positives = 307/616 (49%), Gaps = 75/616 (12%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
NVFS + ++ K L AR +FD P ++ V++N+++ GY + A A++LF+EM
Sbjct: 129 NVFSASALLDVYAKCGRLSDARRVFDGMPVRNTVSWNALIAGYAESRK-PAQAMELFLEM 187
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
Q + + D+ T + L +QLH + K + +++ I YS+C
Sbjct: 188 QRVE--LVPDDATFAALLATVEGPSWYSLMQQLHGKIAKYGSALGLVVLNAAITAYSQCG 245
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
+ ++ R+F+G + D +SWN+++ Y
Sbjct: 246 AFADSRRIFDGI---------------------------------QSRDLISWNSMLGAY 272
Query: 235 VQNGDAEEGLKLFVRM-GENGVRWNEHTFASALSAC----CGLRNVKCAKEIHSWVLKNG 289
+G +E ++ FVRM E+GV+ + ++F S +S C C R + IHS V+K G
Sbjct: 273 AYHGMDDEAMRFFVRMMRESGVQPDMYSFTSVVSVCSEHGCDDRQ---GRSIHSLVVKIG 329
Query: 290 LISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFD 349
L V + ++ +Y + F+ + M ME+A + FD
Sbjct: 330 LEGVTHVCNAMIAMYTR-------------------FTENCM---------MEDAYKCFD 361
Query: 350 SLTEKNVVVWTALFSGYVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAAL 408
SL K+ V W ++ +GY + +AL F+ E V TD L L +C+ A L
Sbjct: 362 SLVFKDAVSWNSMLTGYSHHGLSSDAL--RFFRFMRAENVSTDEFALSAALRSCSDLAVL 419
Query: 409 HPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACY 468
G+++H+ +++ G + + S+L+ MYSKCG + A F+ + V +N M+ Y
Sbjct: 420 RLGRQVHSLVIQSGFSSNDFVSSSLIFMYSKCGMVGDARKSFEEADKGSSVPWNSMMFGY 479
Query: 469 AHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE 528
A HG + LF EML+ + D VTFVA+L+A+ H G V+ G + NSM YKI
Sbjct: 480 AQHGQAQTVTDLFSEMLDHKVPLDHVTFVALLTAYSHGGLVDEGSEILNSMETRYKIPLR 539
Query: 529 TDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLL 588
+HYAC +DLYGRA QL+KA E ++S+P + DA++ + L CR++ N ELA + L
Sbjct: 540 MEHYACGVDLYGRAGQLDKAKELIESMPFQPDAMVWMTLLGACRIHGNMELASDVASHLF 599
Query: 589 RLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGD 648
E + YV L+++Y+ G W++ ++K M+ ++ G SW+ V++E+H F D
Sbjct: 600 VAEPRQHSTYVLLSSMYSGRGMWSDRATVQKVMKNRGLSKVPGWSWIEVKNEVHSFNADD 659
Query: 649 VSHPKTNAIYSVLAIF 664
SHP+ + I+ +L +
Sbjct: 660 RSHPRMDEIFDMLRML 675
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 157/353 (44%), Gaps = 41/353 (11%)
Query: 223 DAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIH 282
DAVSWN+L++ +V G + +L M G+ + SAL + R + ++
Sbjct: 59 DAVSWNSLLAAHVAAGAHRDAWRLLKDMHARGLTASTFALGSALRSAAAARRPELGAQLQ 118
Query: 283 SWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNME 342
S+ +K+GL+ N F +S ++DVY KC ++ A + VRN+ S
Sbjct: 119 SFAVKSGLVDNVFSASALLDVYAKCGRLSDARRVFDGMPVRNTVS--------------- 163
Query: 343 EARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGAC 402
W AL +GY +++ +L E E V DA LL
Sbjct: 164 ----------------WNALIAGYAESRKPAQAMELFLEMQRVELVPDDA-TFAALLATV 206
Query: 403 ALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYN 462
+ +++H I + G + +++ + YS+CG + IF RDL+ +N
Sbjct: 207 EGPSWYSLMQQLHGKIAKYGSALGLVVLNAAITAYSQCGAFADSRRIFDGIQSRDLISWN 266
Query: 463 VMIACYAHHGHEEKAILLFEEML-EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTA 521
M+ YA+HG +++A+ F M+ E G++PD +F +++S G + + +S+
Sbjct: 267 SMLGAYAYHGMDDEAMRFFVRMMRESGVQPDMYSFTSVVSVCSEHGCDDRQGRSIHSLVV 326
Query: 522 DYKISPETDHYAC--MIDLYGRANQ---LEKAIEFMKSIPTEEDAVILGSFLN 569
KI E + C MI +Y R + +E A + S+ +DAV S L
Sbjct: 327 --KIGLEGVTHVCNAMIAMYTRFTENCMMEDAYKCFDSL-VFKDAVSWNSMLT 376
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 4/184 (2%)
Query: 321 GVRNSFSISSMIVGYSLQG---NMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFD 377
G + + ++ YS G + ARR FD + + V W +L + +V A +
Sbjct: 22 GATSPTPWNQLLTAYSASGPGSGLAAARRVFDEIPRPDAVSWNSLLAAHVAAGAHRDAWR 81
Query: 378 LLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMY 437
LL + + G+ L L + A G ++ ++ ++ G+ + S L+D+Y
Sbjct: 82 LLKDMHAR-GLTASTFALGSALRSAAAARRPELGAQLQSFAVKSGLVDNVFSASALLDVY 140
Query: 438 SKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFV 497
+KCG ++ A +F R+ V +N +IA YA +A+ LF EM + PD TF
Sbjct: 141 AKCGRLSDARRVFDGMPVRNTVSWNALIAGYAESRKPAQAMELFLEMQRVELVPDDATFA 200
Query: 498 AILS 501
A+L+
Sbjct: 201 ALLA 204
>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
Length = 1072
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 194/677 (28%), Positives = 322/677 (47%), Gaps = 97/677 (14%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H GL + +LI Y++ + S+++FD P+ + F W +I +
Sbjct: 368 HAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGFF 427
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYI-------------NAEGYEADALKLFIEMQSADE 119
++A SL+ ++D ++ + + G ++ L +F +M S E
Sbjct: 428 EEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKNGQASEGLDMFSQMIS--E 485
Query: 120 HIRMDEFTVTSTLNLCVKL--LNVGF------GRQLHAFMVKTSNDAS-GFAVSSLIDMY 170
+ D T+ S C +L L +G GR +H F+++ + D F +L+++Y
Sbjct: 486 AVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELY 545
Query: 171 SKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTL 230
+ + +VFE E+ L SWNTL
Sbjct: 546 ADTGNLRDCHKVFETIKEKTIL---------------------------------SWNTL 572
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL 290
IS + +NG EE L LFV+M G+ + ++ AS+LSAC + + +IH +++K G
Sbjct: 573 ISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGN 632
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
N FV + ++D+Y KC G + A + F+
Sbjct: 633 F-NDFVQNALIDMYAKC-------------------------------GFVHSANKMFEK 660
Query: 351 LTEKNVVVWTALFSGYVK-AQNCEA--LFDLLSEFVTKEGVVTDALILVILLGACALQAA 407
+ EK++V W ++ G+ + + EA LFD + K D L + ++ AC+
Sbjct: 661 IKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVK----MDKLTFLSVIQACSHLGY 716
Query: 408 LHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIAC 467
L GK +H ++ G++ D L + L DMYSKCG + A +F ER +V ++VMIA
Sbjct: 717 LEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAG 776
Query: 468 YAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISP 527
Y HG I LF +ML GIKP+ +TF+ ILSA H G+VE G+ YFNSM+ ++ + P
Sbjct: 777 YGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMS-EFGVEP 835
Query: 528 ETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKL 587
+ DH+ACM+DL RA L A + + S+P ++ I G+ LN CR+++ ++ E+ L
Sbjct: 836 KHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNL 895
Query: 588 LRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVG 647
L ++ + Y L+N+YA EG W + G++R M+ + G S + ++ +I+ F G
Sbjct: 896 LDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPG 955
Query: 648 DVSHPKTNAIYSVLAIF 664
D SH +T IY L F
Sbjct: 956 DTSHSQTKDIYRFLENF 972
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 109/237 (45%), Gaps = 26/237 (10%)
Query: 280 EIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQG 339
++H+ + GL +P S+ +++ Y + ++ + +SF +I Y G
Sbjct: 366 QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGG 425
Query: 340 NMEEARRHFDSLT-EKNVVVWTALFSGYVKA--------------QNCEALFDLLSEFVT 384
EEA + + + + +F +KA Q E L D+ S+ ++
Sbjct: 426 FFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKNGQASEGL-DMFSQMIS 484
Query: 385 KEGVVTDALILVILLGACALQAALH--------PGKEIHAYILRMGVQMDKKLI-STLVD 435
E V D++ ++ + AC+ +L G+ +H +++R + + + L++
Sbjct: 485 -EAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAMDPELDFLGPALME 543
Query: 436 MYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
+Y+ GN+ +F+ E+ ++ +N +I+ + +G E+A+LLF +M +G+ PD
Sbjct: 544 LYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPD 600
>gi|356546772|ref|XP_003541796.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like [Glycine max]
Length = 713
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 197/677 (29%), Positives = 343/677 (50%), Gaps = 47/677 (6%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
I N I ++ ++E+ +F +MP +N SW +++A ++ ++ AR LFD P +
Sbjct: 42 IQCNTQIAENGRNGNVKEAESIFHKMPIKNTASWTAMLTAFAQNGQIQNARRLFDEMPQR 101
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR 145
V+ N+M+ YI A +LF + E + S + + + G
Sbjct: 102 TTVSNNAMISAYIRNGCNVGKAYELFSVLA---------ERNLVSYAAMIMGFVKAGKFH 152
Query: 146 QLHAFMVKTSNDASGFAVS-SLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
+T + A S +LI+ Y K EA R+FE E +++S +AMV CR
Sbjct: 153 MAEKLYRETPYEFRDPACSNALINGYLKMGEVNEALRIFENMGER-DVVSWSAMVDGLCR 211
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG-VRWNEHTFA 263
+G + A F R P+ N VSW+ +I GY+ G +EG LF+ M G V N T
Sbjct: 212 DGRVAAARDLFDRMPDRN-VVSWSAMIDGYMGEGFFQEGFCLFMDMKREGLVEVNSTTMT 270
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
AC + +IH V + G + +S+ ++ +Y + A+ + +
Sbjct: 271 IMFKACGNCGRMSEGMQIHGLVSRLGFEFDNVLSNSVITMYSMLGCTDMADKVFCTVSDK 330
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA---QNCEALFDLL- 379
+ + +S+I GY +E A R F + K+V+ WTA+ +G+ K+ +N LF++L
Sbjct: 331 DIVTWNSLISGYIHNNEVEAAYRVFGRMPVKDVISWTAMIAGFSKSGRVENAIELFNMLP 390
Query: 380 -----------SEFVTK---------------EGVVTDALILVILLGACALQAALHPGKE 413
S FV EG + L + +L A A AL+ G +
Sbjct: 391 AKDDFVWTAIISGFVNNNEYEEALHWYARMIWEGCKPNPLTISSVLAASAALVALNEGLQ 450
Query: 414 IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH 473
IH IL+M ++ + + ++L+ YSK GN+ A IF + IE +++ YN +I+ +A +G
Sbjct: 451 IHTCILKMNLEYNLSIQNSLISFYSKSGNVVDAYRIFLDVIEPNVISYNSIISGFAQNGF 510
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA 533
++A+ ++++M +G +P+ VTF+A+LSA H G V+ G FN+M + Y I PE DHYA
Sbjct: 511 GDEALGIYKKMQSEGHEPNHVTFLAVLSACTHAGLVDEGWNIFNTMKSHYGIEPEADHYA 570
Query: 534 CMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGN 593
CM+D+ GRA L++AI+ ++S+P + + + G+ L + + +LA A +++ LE
Sbjct: 571 CMVDILGRAGLLDEAIDLIRSMPFKPHSGVWGAILGASKTHLRLDLAKLAAQRITDLEPK 630
Query: 594 NKARYVQLANVYAAEGNW--AEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSH 651
N YV L+N+Y+A G ++ ++ K ++G+K + GCSW+ +++++H+F GD SH
Sbjct: 631 NATPYVVLSNMYSAAGKKIDGDLVKMAKNLKGIK--KSPGCSWITMKNKVHLFLAGDQSH 688
Query: 652 PKTNAIYSVLAIFTGEL 668
I + + E+
Sbjct: 689 GSIEEIKTTILTMDREM 705
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 133/269 (49%), Gaps = 15/269 (5%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
+ E + H + G + +N +I +YS + K+F + ++++ +WN++IS
Sbjct: 282 MSEGMQIHGLVSRLGFEFDNVLSNSVITMYSMLGCTDMADKVFCTVSDKDIVTWNSLISG 341
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
I +++++ A +F P KD++++ +M+ G+ + G +A++LF + + D+
Sbjct: 342 YIHNNEVEAAYRVFGRMPVKDVISWTAMIAGF-SKSGRVENAIELFNMLPAK------DD 394
Query: 126 FTVTSTLNLCVKLLNVGFGRQLH--AFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
F T+ ++ V N + LH A M+ + +SS++ + E ++
Sbjct: 395 FVWTAIISGFVN--NNEYEEALHWYARMIWEGCKPNPLTISSVLAASAALVALNEGLQIH 452
Query: 184 EGCTE---EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+ E NL +N++++ + G + A + F E N +S+N++ISG+ QNG
Sbjct: 453 TCILKMNLEYNLSIQNSLISFYSKSGNVVDAYRIFLDVIEPN-VISYNSIISGFAQNGFG 511
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSAC 269
+E L ++ +M G N TF + LSAC
Sbjct: 512 DEALGIYKKMQSEGHEPNHVTFLAVLSAC 540
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 97/227 (42%), Gaps = 29/227 (12%)
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV---KAQNCEALF 376
KG + ++ I GN++EA F + KN WTA+ + + + QN LF
Sbjct: 36 KGSKFLIQCNTQIAENGRNGNVKEAESIFHKMPIKNTASWTAMLTAFAQNGQIQNARRLF 95
Query: 377 DLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS--TLV 434
D + + T V +A+I + C + GK AY L V ++ L+S ++
Sbjct: 96 DEMPQRTT---VSNNAMISAYIRNGCNV------GK---AYEL-FSVLAERNLVSYAAMI 142
Query: 435 DMYSKCGNMTYAEIIFQN--FIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
+ K G AE +++ + RD N +I Y G +A+ +FE M E+ D
Sbjct: 143 MGFVKAGKFHMAEKLYRETPYEFRDPACSNALINGYLKMGEVNEALRIFENMGER----D 198
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
V++ A++ G V F+ M +S ++ MID Y
Sbjct: 199 VVSWSAMVDGLCRDGRVAAARDLFDRMPDRNVVS-----WSAMIDGY 240
>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
Length = 1161
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 200/663 (30%), Positives = 316/663 (47%), Gaps = 113/663 (17%)
Query: 23 LTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSS 82
L IT+N LI +Y K + K+FD MPERNV SW+ ++S + + DLK + SLF
Sbjct: 410 LNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFS-- 467
Query: 83 PHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVG 142
+ + I +EFT ++ L C L +
Sbjct: 468 --------------------------------EMGRQGIYPNEFTFSTNLKACGLLNALE 495
Query: 143 FGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAAC 202
G Q+H F +K + +SL+DMYSKC EA +VF + +LIS NAM+A
Sbjct: 496 KGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDR-SLISWNAMIAGF 554
Query: 203 CREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTF 262
G AL TF G +Q + +E R +E T
Sbjct: 555 VHAGYGSKALDTF-----------------GMMQEANIKE-------------RPDEFTL 584
Query: 263 ASALSACCGLRNVKCAKEIHSWVLKNGL--ISNPFVSSGIVDVYCKCENMNYAESMLLLK 320
S L AC + K+IH +++++G S+ ++ +VD+Y KC
Sbjct: 585 TSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKC------------- 631
Query: 321 GVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE-----AL 375
G + AR+ FD + EK ++ W++L GY AQ E L
Sbjct: 632 ------------------GYLFSARKAFDQIKEKTMISWSSLILGY--AQEGEFVEAMGL 671
Query: 376 FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVD 435
F L E ++ D+ L ++G A A L GK++ A +++ ++ +++++VD
Sbjct: 672 FKRLQELNSQ----IDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVD 727
Query: 436 MYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVT 495
MY KCG + AE F +D++ + V+I Y HG +K++ +F EML I+PD V
Sbjct: 728 MYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVC 787
Query: 496 FVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSI 555
++A+LSA H G ++ GE+ F+ + + I P +HYAC++DL GRA +L++A + ++
Sbjct: 788 YLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTM 847
Query: 556 PTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMG 615
P + + I + L++CR++ + EL E + LLR++ N A YV ++N+Y G W E G
Sbjct: 848 PIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQG 907
Query: 616 RIRK--QMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIAG 673
R+ ++G+K + AG SWV +E E+H F G+ SHP T I L L E G
Sbjct: 908 NARELGNIKGLK--KEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELG 965
Query: 674 AFY 676
Y
Sbjct: 966 YVY 968
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 114/542 (21%), Positives = 214/542 (39%), Gaps = 140/542 (25%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L++ L H +K G + N L+ +YSK + E+ K+F + +R++ SW
Sbjct: 494 LEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISW------ 547
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
N+M+ G+++A GY + AL F MQ A+ R DE
Sbjct: 548 -------------------------NAMIAGFVHA-GYGSKALDTFGMMQEANIKERPDE 581
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSN--DASGFAVSSLIDMYSKCRCYEEACRVF 183
FT+TS L C + G+Q+H F+V++ +S SL+D+Y KC A + F
Sbjct: 582 FTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAF 641
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
+ E+ +IS ++++ +EGE A+ F R ELN +
Sbjct: 642 DQIKEKT-MISWSSLILGYAQEGEFVEAMGLFKRLQELNSQI------------------ 682
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLK--NGLISNPFVSSGIV 301
+ +S + ++ K++ + +K +GL ++ V + +V
Sbjct: 683 --------------DSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETS--VLNSVV 726
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D+Y KC G ++EA + F + K+V+ WT
Sbjct: 727 DMYLKC-------------------------------GLVDEAEKCFAEMQLKDVISWTV 755
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+ +GY K + + E + + + D + + +L AC+ + G+E+ + +L
Sbjct: 756 VITGYGKHGLGKKSVRIFYEML-RHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLET 814
Query: 422 -GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
G++ + + +VD+ + G + A+ +
Sbjct: 815 HGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTM--------------------------- 847
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
IKP+ + +LS R G +E+G++ + +P +Y M +LYG
Sbjct: 848 -------PIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPA--NYVMMSNLYG 898
Query: 541 RA 542
+A
Sbjct: 899 QA 900
>gi|449505835|ref|XP_004162581.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g02750-like [Cucumis sativus]
Length = 741
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 196/623 (31%), Positives = 321/623 (51%), Gaps = 59/623 (9%)
Query: 25 TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPH 84
T+ N LI Y+K L RE++KLFDEM +NV SWN+I+S K+ ++ F++
Sbjct: 140 TVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFFEAMGE 199
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
+++V++N M+ GY+ + D+ +F + ++ V S + +
Sbjct: 200 RNVVSWNLMVDGYVGVG--DLDSAWMFFK--------KIPTPNVVSWVTML--------- 240
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
SGFA Y + EA +F + NL+S NAM+ A R
Sbjct: 241 --------------SGFA------HYGRM---TEARNLFNEMPTK-NLVSWNAMIGAYVR 276
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFAS 264
E +++ A K F PE D+VSW +I+GYV+ G + ++ M +
Sbjct: 277 ENQIDDAYKLFMEMPE-KDSVSWTAMINGYVRVGKLLQAREILNLMPYKNIAAQTAMING 335
Query: 265 ALSACCGLRNVKCAKEIHSWV-LKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
L + + A EI S + +++ + N ++ Y C + A + +
Sbjct: 336 YLQSG----RMDEANEIFSQISVRDSVCWNSMITG-----YAHCGRTDEALRLFQEMVCK 386
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV 383
+ S ++MI Y+ G M++A F+ + E+NVV W +L +GYV QN F+ L+ F+
Sbjct: 387 DMVSWNTMIAAYAQAGQMDKALEMFNEMQERNVVSWNSLITGYV--QNG-LYFEALNCFI 443
Query: 384 --TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
++G D +V L A A AAL+ G ++H ++ G D + + ++ MY+K G
Sbjct: 444 LMKQQGEKPDQTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLFVKNAILTMYAKSG 503
Query: 442 NMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
+ AE +F +D+V +N +IA YA +G ++A+ LFE M +GI PD VTF +LS
Sbjct: 504 RVPEAENVFAEIKXKDVVSWNSLIAGYALNGCGKEAVELFEVMPLRGIIPDEVTFTGLLS 563
Query: 502 AFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDA 561
A H G V+ G F SMT Y I P+++HYAC+I+L GR +LE+A+E ++ + T A
Sbjct: 564 ACNHGGFVDQGLNLFKSMTETYSIKPQSEHYACVINLLGRVGRLEEAVEIVQGMKTVSSA 623
Query: 562 VILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQM 621
I G+ L CR++ N ELA + E+LL LE N + YV L+N++A G W + R+R M
Sbjct: 624 KIWGALLWACRIHHNLELAKYSAERLLALEPQNASNYVLLSNMHAEAGRWDMVERVRVLM 683
Query: 622 RGMKGNRFAGCSWVYVEHEIHIF 644
+ K + GCSW+ +++++H F
Sbjct: 684 KENKAEKQPGCSWIEIDNQLHCF 706
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 206/472 (43%), Gaps = 80/472 (16%)
Query: 56 VFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQ 115
VF+ N IS +S +++A ++F +++VTYNSM+ Y G A+A +LF ++
Sbjct: 15 VFTQNLRISQLGRSGRIEEAVAVFLKMTERNIVTYNSMISAYAK-NGRIANARELF-DLM 72
Query: 116 SADEHIRMDEFTVTSTLNLCV----KLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYS 171
+ + N V +L + F R ++++ + +I Y+
Sbjct: 73 PQRNLVSWNSMIAGYLHNELVEDAARLFDRMFKRDIYSWTL-------------MITCYT 119
Query: 172 KCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLI 231
+ E+A +F ++ + + +NA++A ++ A K F + + + VSWN+++
Sbjct: 120 RIGELEKARELFNLLPDKQDTVCRNALIAGYAKKRLFREAKKLF-DEMLVKNVVSWNSIL 178
Query: 232 SGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI 291
SGY +NG + GL+ F MGE RNV SW L
Sbjct: 179 SGYTKNGKMQLGLQFFEAMGE--------------------RNVV------SWNL----- 207
Query: 292 SNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL 351
+VD Y +++ A N S +M+ G++ G M EAR F+ +
Sbjct: 208 --------MVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLFNEM 259
Query: 352 TEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAA---- 407
KN+V W A+ YV+ + + L E K+ V A+I + LQA
Sbjct: 260 PTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKLLQAREILN 319
Query: 408 LHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIAC 467
L P K I A + +++ Y + G M A IF RD V +N MI
Sbjct: 320 LMPYKNIAAQ-------------TAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITG 366
Query: 468 YAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSM 519
YAH G ++A+ LF+EM+ K D V++ +++A+ G ++ + FN M
Sbjct: 367 YAHCGRTDEALRLFQEMVCK----DMVSWNTMIAAYAQAGQMDKALEMFNEM 414
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H IK G N ++ +Y+K + E+ +F E+ ++V SWN++I+ +
Sbjct: 477 HHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKXKDVVSWNSLIAGYALNGCG 536
Query: 73 KQARSLFDSSPHK----DLVTYNSMLCGYINAEGYEADALKLFIEM 114
K+A LF+ P + D VT+ +L N G+ L LF M
Sbjct: 537 KEAVELFEVMPLRGIIPDEVTFTGLLSA-CNHGGFVDQGLNLFKSM 581
>gi|255574235|ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532562|gb|EEF34350.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 730
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 196/666 (29%), Positives = 314/666 (47%), Gaps = 73/666 (10%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L + H I G I +L+ Y+ +LL ++ + + + WN +IS
Sbjct: 108 SLSQGKQLHTLIISLGFEQHPIIVPKLVTFYTNFDLLADAHTITENSNILHPLPWNLLIS 167
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
+ +++ G +AL + +M + IR D
Sbjct: 168 SYVRN--------------------------------GLHGEALSAYKQM--THKGIRPD 193
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
+FT S L C + L++ FG++LHA + + + F +SL+ MY+K A +FE
Sbjct: 194 KFTYPSVLKACGEKLDIAFGKKLHASINASCLGWNLFVHNSLVSMYAKTGELSTARCLFE 253
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQP----ELNDAVSWNTLISGYVQNGDA 240
E + +S N M++ +G + A + F + ELN ++WNT+ G VQ+G+
Sbjct: 254 NMLERDD-VSWNTMISGYASKGMWKEAFELFGKMRVEGIELN-IITWNTIAGGCVQSGNF 311
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
EE L+L M G+ + L AC + +K +EIH +++ V + +
Sbjct: 312 EEALELLSHMRSYGIDMDSVATIIGLGACSHIGAIKLGREIHGSAIRSFYDGVDNVKNAL 371
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
+ +Y +C+ + +A ++ +N + +SM+ GY+ EEA F +
Sbjct: 372 ITMYSRCKYLRHAYNLFQSTRTKNIITWNSMLSGYTHMDRSEEASFLFREM--------- 422
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
LLS G+ + + + +L CA A L GKE H YILR
Sbjct: 423 -----------------LLS------GIEPNYVTIASILPLCARVANLQHGKEFHCYILR 459
Query: 421 MGVQMDKKLI-STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
D L+ ++LVDMY++ G + A+ +F + RD V Y +IA Y G +A+
Sbjct: 460 RAGFKDYLLLWNSLVDMYARSGKVLEAKRLFDSISRRDEVTYTSLIAGYGIQGEGREALK 519
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
LF+EM ++ IKPD VT VA+LSA H G V G K F M + Y I P +H+ACM+DL+
Sbjct: 520 LFDEMKKRHIKPDHVTMVAVLSACSHSGLVTEGIKLFELMPSAYGIIPRLEHFACMVDLF 579
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYV 599
GRA L KA E + +P + + + L CR++ NAE+ A EKLL + N YV
Sbjct: 580 GRAGLLHKAKEMITRMPYRPSSAMWATLLGACRIHGNAEIGEWAAEKLLEMRPENSGYYV 639
Query: 600 QLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYS 659
+AN+YAA G W+++ ++R MR + + GC+WV V F V D S P N +Y
Sbjct: 640 LIANMYAAAGCWSKLAKVRTYMRDLGVRKAPGCAWVDVGSGFFPFLVDDTSKPHVNKLYP 699
Query: 660 VLAIFT 665
+L T
Sbjct: 700 LLEGLT 705
>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 866
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 192/615 (31%), Positives = 315/615 (51%), Gaps = 75/615 (12%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYI-NAEGYEADALKLFIEMQSAD 118
N +I+ +K D+K AR LFD P +D++++N+M+ GY N G+E LKLF M+
Sbjct: 235 NALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEG--LKLFFAMRGLS 292
Query: 119 EHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEE 178
+ D T+TS ++ C L + GR +HA+++ T GFAV S C
Sbjct: 293 --VDPDLMTLTSVISACELLGDRRLGRDIHAYVITT-----GFAVD-----ISVC----- 335
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
N +++ + A RE E K F R + D VSW T+ISGY N
Sbjct: 336 ------------NSLTQMYLYAGSWREAE-----KLFSRM-DCKDIVSWTTMISGYEYNF 377
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
E+ + + M ++ V+ +E T A+ LSAC L ++ E+H +K LIS V++
Sbjct: 378 LPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVAN 437
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
++++Y KC+ ++ A + F ++ KNV+
Sbjct: 438 NLINMYSKCKCIDKALDI-------------------------------FHNIPRKNVIS 466
Query: 359 WTALFSGYVKAQNCEALFDLLSEFVT-KEGVVTDALILVILLGACALQAALHPGKEIHAY 417
WT++ +G C F+ L F K + +A+ L L ACA AL GKEIHA+
Sbjct: 467 WTSIIAGLRLNNRC---FEALIFFRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAH 523
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
+LR GV +D L + L+DMY +CG M A F N ++D+ +N+++ Y+ G
Sbjct: 524 VLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQF-NSQKKDVSSWNILLTGYSERGQGSVV 582
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID 537
+ LF+ M++ ++PD +TF+++L V G YF+ M +Y ++P HYAC++D
Sbjct: 583 VELFDRMVKARVRPDEITFISLLCGCGKSQMVRQGLMYFSKME-EYGVTPNLKHYACVVD 641
Query: 538 LYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKAR 597
L GRA +L++A +F++ +P D + G+ LN CR++ N +L + +++ L+ +
Sbjct: 642 LLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHNIDLGELSAQRIFELDKGSVGY 701
Query: 598 YVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
Y+ L N+YA G W E+ ++R+ M+ AGCSWV V+ ++H F D HP+T I
Sbjct: 702 YILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEI 761
Query: 658 YSVLAIFTGELYEIA 672
+VL F ++ E+
Sbjct: 762 NTVLDGFYEKMSEVG 776
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 125/535 (23%), Positives = 215/535 (40%), Gaps = 98/535 (18%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H I G + N L +Y RE+ KLF M +++ SW T+IS
Sbjct: 320 HAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISG------- 372
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
++ P K + TY M + ++ DE TV + L
Sbjct: 373 ----YEYNFLPEKAIDTYRMM-----------------------DQDSVKPDEITVAAVL 405
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C L ++ G +LH +K + ++LI+MYSKC+C ++A +F N+
Sbjct: 406 SACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFH------NI 459
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
KN +SW ++I+G N E L +F R +
Sbjct: 460 PRKN---------------------------VISWTSIIAGLRLNNRCFEAL-IFFRQMK 491
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
++ N T +AL+AC + + C KEIH+ VL+ G+ + F+ + ++D+Y +C MN
Sbjct: 492 MTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNI 551
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNV----VVWTALFSGYVK 368
A + + ++ S + ++ GYS +G FD + + V + + +L G K
Sbjct: 552 AWNQFNSQK-KDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGCGK 610
Query: 369 AQNCEA---LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
+Q F + E+ + A ++ +L A LQ E H +I +M V
Sbjct: 611 SQMVRQGLMYFSKMEEYGVTPNLKHYACVVDLLGRAGELQ-------EAHKFIQKMPVTP 663
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFIERD---LVLYNVMIACYAHHGHEEKAILLFE 482
D + L++ N+ E+ Q E D + Y ++ YA G + +
Sbjct: 664 DPAVWGALLNACRIHHNIDLGELSAQRIFELDKGSVGYYILLCNLYADCGKWREVAKVRR 723
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID 537
M E G+ DA C VE+ K ++ +D K P+T ++D
Sbjct: 724 MMKENGLTVDA-----------GCSWVEVKGK-VHAFLSDDKYHPQTKEINTVLD 766
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 120/286 (41%), Gaps = 37/286 (12%)
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL 290
+ G NG EE +KL M E V +E F + + C R + +++S L +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSS-- 123
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSI---SSMIVGYSLQGNMEEARRH 347
NS S+ ++ + + GN+ +A
Sbjct: 124 --------------------------------MNSLSVELGNAFLAMFVRFGNLVDAWYV 151
Query: 348 FDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAA 407
F ++E+N+ W L GY K + L + GV D +L C
Sbjct: 152 FGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVYTFPCVLRTCGGIPD 211
Query: 408 LHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIAC 467
L G+E+H +++R G ++D +++ L+ MY KCG++ A ++F RD++ +N MI+
Sbjct: 212 LARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISG 271
Query: 468 YAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
Y +G + + LF M + PD +T +++SA G +G
Sbjct: 272 YFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGR 317
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 86/189 (45%), Gaps = 10/189 (5%)
Query: 388 VVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAE 447
V D + V L+ C + A G ++++ L + +L + + M+ + GN+ A
Sbjct: 90 VAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLSVELGNAFLAMFVRFGNLVDAW 149
Query: 448 IIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE-KGIKPDAVTFVAILSAFRHC 506
+F ER+L +NV++ YA G+ ++AI L+ ML G+KPD TF +L R C
Sbjct: 150 YVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVYTFPCVL---RTC 206
Query: 507 GSVE--MGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE----D 560
G + + + Y + D +I +Y + ++ A +P + +
Sbjct: 207 GGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWN 266
Query: 561 AVILGSFLN 569
A+I G F N
Sbjct: 267 AMISGYFEN 275
>gi|15221713|ref|NP_174428.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169458|sp|Q9C866.1|PPR65_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31430
gi|12322531|gb|AAG51260.1|AC027135_1 PPR-repeat protein [Arabidopsis thaliana]
gi|332193234|gb|AEE31355.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 570
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 187/581 (32%), Positives = 305/581 (52%), Gaps = 44/581 (7%)
Query: 87 LVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQ 146
L+ YN ML + + + L LF E++ + + D FT+ L +L V G +
Sbjct: 11 LLMYNKMLKSLADGKSF-TKVLALFGELRG--QGLYPDNFTLPVVLKSIGRLRKVIEGEK 67
Query: 147 LHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREG 206
+H + VK + + +SL+ MY+ G
Sbjct: 68 VHGYAVKAGLEFDSYVSNSLMGMYASL--------------------------------G 95
Query: 207 EMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG-ENGVRWNEHTFASA 265
++E+ K F P+ D VSWN LIS YV NG E+ + +F RM E+ ++++E T S
Sbjct: 96 KIEITHKVFDEMPQ-RDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVST 154
Query: 266 LSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNS 325
LSAC L+N++ + I+ +V+ +S + + +VD++CKC ++ A ++ +N
Sbjct: 155 LSACSALKNLEIGERIYRFVVTEFEMSVR-IGNALVDMFCKCGCLDKARAVFDSMRDKNV 213
Query: 326 FSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTK 385
+SM+ GY G ++EAR F+ K+VV+WTA+ +GYV+ + +L T
Sbjct: 214 KCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTA 273
Query: 386 EGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTY 445
G+ D +LV LL CA AL GK IH YI V +DK + + LVDMY+KCG +
Sbjct: 274 -GIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIET 332
Query: 446 AEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRH 505
A +F ERD + +I A +G +A+ L+ EM G++ DA+TFVA+L+A H
Sbjct: 333 ALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNH 392
Query: 506 CGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILG 565
G V G K F+SMT + + P+++H +C+IDL RA L++A E + + E D ++
Sbjct: 393 GGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVP 452
Query: 566 ---SFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMR 622
S L+ R N ++A EKL ++E ++ + + LA+VYA+ W ++ +R++M+
Sbjct: 453 VYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMK 512
Query: 623 GMKGNRFAGCSWVYVEHEIHIFTVGD--VSHPKTNAIYSVL 661
+ +F GCS + ++ H F VGD +SHPK + I S+L
Sbjct: 513 DLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSML 553
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 195/436 (44%), Gaps = 69/436 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A+KAGL + +N L+ +Y+ + + K+FDEMP
Sbjct: 69 HGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMP-------------------- 108
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+D+V++N ++ Y+ +E DA+ +F M S + +++ DE T+ STL
Sbjct: 109 -----------QRDVVSWNGLISSYVGNGRFE-DAIGVFKRM-SQESNLKFDEGTIVSTL 155
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C L N+ G +++ F+V T + S ++L+DM+ KC C ++A VF+ ++ N+
Sbjct: 156 SACSALKNLEIGERIYRFVV-TEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDK-NV 213
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+MV G ++ A F R P + D V W +++GYVQ +E L+LF M
Sbjct: 214 KCWTSMVFGYVSTGRIDEARVLFERSP-VKDVVLWTAMMNGYVQFNRFDEALELFRCMQT 272
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G+R + S L+ C ++ K IH ++ +N + + V + +VD+Y KC
Sbjct: 273 AGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKC----- 327
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G +E A F + E++ WT+L G
Sbjct: 328 --------------------------GCIETALEVFYEIKERDTASWTSLIYGLAMNGMS 361
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI-HAYILRMGVQMDKKLIS 431
DL E + GV DA+ V +L AC + G++I H+ R VQ + S
Sbjct: 362 GRALDLYYE-MENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCS 420
Query: 432 TLVDMYSKCGNMTYAE 447
L+D+ + G + AE
Sbjct: 421 CLIDLLCRAGLLDEAE 436
>gi|357138593|ref|XP_003570875.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 664
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 176/628 (28%), Positives = 312/628 (49%), Gaps = 59/628 (9%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
T N +I + +L ++R++FD MP RN SW +++ + + +AR LFD P +
Sbjct: 75 FTWNCMISGLVGNRMLADARRVFDAMPVRNPVSWAALLTGYARCGRVAEARELFDRMPDR 134
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR 145
++V++N+M+ GY+ G A +LF M S ++ + + ++ +K + R
Sbjct: 135 NVVSWNAMMSGYLR-NGMVERARELFDMMPSRND------VSWLTMISGYIKKRRLREAR 187
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
+L F + S+ S ++L+ Y C ++A +F G + + +S N M+ R
Sbjct: 188 EL--FDLSPSHPTS--VCNALLSGYVALSCLKDAEELF-GRMQRRDPVSWNVMITGYARA 242
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGV-RWNEHTFAS 264
G M++A F P+ D +SW ++ GY+QNGD + K+F + + V WN
Sbjct: 243 GRMQVAQSLFDEMPQ-KDTISWTAVMRGYLQNGDVDASWKVFQDIPDRDVVAWNT----- 296
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
++ + + E ++ A + R+
Sbjct: 297 -----------------------------------MMGGFVQSERLDDALRLFAEMPERD 321
Query: 325 SFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVT 384
S ++++ G+ QG+M A F + EK+ W L SG+ E LLSE +
Sbjct: 322 LVSWNTILQGHVQQGDMATANTWFRGMPEKDETSWNTLISGHKD----EGALALLSEMI- 376
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
+ G+ D L +++ CA AL GK +H Y ++ G + D ++S+L+ MYSKCG +
Sbjct: 377 RGGLRPDEATLSVVISICASLVALGYGKMVHLYAVKTGFEHDALVMSSLISMYSKCGLIA 436
Query: 445 YAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR 504
A +F+ ++RD V +N MIA YA+HG +A+ LF +M + G +PD TF+++LSA
Sbjct: 437 EASQVFKLLVQRDTVTWNAMIATYAYHGMASEALKLFNKMTKDGFRPDHATFLSVLSACA 496
Query: 505 HCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVIL 564
H G + G +YF SM D+ ++P +DHY+CM+DL GR + +A +F + IP++
Sbjct: 497 HKGDLYEGCRYFRSMQEDWNLTPRSDHYSCMVDLLGRLGFIYQAYDFTRKIPSDLQINAW 556
Query: 565 GSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGM 624
+ + C + + +L + +L+ ++ Y LAN+YA++ W+ +R M+
Sbjct: 557 ETLFSACNAHGDVQLGEVIAKDVLQARPSDGGMYTLLANIYASKEMWSSAASVRGVMKEQ 616
Query: 625 KGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
+ GCSWV ++ E+ F+ D +HP
Sbjct: 617 GLKKETGCSWVELKGEVVSFSSNDNAHP 644
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 128/271 (47%), Gaps = 59/271 (21%)
Query: 25 TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPH 84
TI+ ++ Y ++ + S K+F ++P+R+V +WNT++ ++S L A LF P
Sbjct: 260 TISWTAVMRGYLQNGDVDASWKVFQDIPDRDVVAWNTMMGGFVQSERLDDALRLFAEMPE 319
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH------------------------ 120
+DLV++N++L G++ +G A A F M DE
Sbjct: 320 RDLVSWNTILQGHVQ-QGDMATANTWFRGMPEKDETSWNTLISGHKDEGALALLSEMIRG 378
Query: 121 -IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
+R DE T++ +++C L+ +G+G+ +H + VKT + +SSLI MYSKC EA
Sbjct: 379 GLRPDEATLSVVISICASLVALGYGKMVHLYAVKTGFEHDALVMSSLISMYSKCGLIAEA 438
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
+VF+ + + ++ NAM+A Y +G
Sbjct: 439 SQVFKLLVQR-DTVTWNAMIAT--------------------------------YAYHGM 465
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACC 270
A E LKLF +M ++G R + TF S LSAC
Sbjct: 466 ASEALKLFNKMTKDGFRPDHATFLSVLSACA 496
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 179/436 (41%), Gaps = 105/436 (24%)
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELN--------------------------- 222
V++ NA++ A R G + A + F PE N
Sbjct: 41 VDIFQWNAVITAHLRAGRVAAARRVFDEMPERNVFTWNCMISGLVGNRMLADARRVFDAM 100
Query: 223 ---DAVSWNTLISGYVQNGDAEEGLKLFVRMGE-NGVRW--------------------- 257
+ VSW L++GY + G E +LF RM + N V W
Sbjct: 101 PVRNPVSWAALLTGYARCGRVAEARELFDRMPDRNVVSWNAMMSGYLRNGMVERARELFD 160
Query: 258 -----NEHTFASALSACCGLRNVKCAKEI------HSWVLKNGLISNPFVSSGIVDVYCK 306
N+ ++ + +S R ++ A+E+ H + N L+ SG V + C
Sbjct: 161 MMPSRNDVSWLTMISGYIKKRRLREARELFDLSPSHPTSVCNALL------SGYVALSC- 213
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
+ AE + R+ S + MI GY+ G M+ A+ FD + +K+ + WTA+ GY
Sbjct: 214 ---LKDAEELFGRMQRRDPVSWNVMITGYARAGRMQVAQSLFDEMPQKDTISWTAVMRGY 270
Query: 367 VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM- 425
++ + +A + + + ++ V + ++G L LR+ +M
Sbjct: 271 LQNGDVDASWKVFQDIPDRDVVAWNT-----MMGGFVQSERLDDA-------LRLFAEMP 318
Query: 426 DKKLIS--TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH-EEKAILLFE 482
++ L+S T++ + + G+M A F+ E+D +N +I+ GH +E A+ L
Sbjct: 319 ERDLVSWNTILQGHVQQGDMATANTWFRGMPEKDETSWNTLIS-----GHKDEGALALLS 373
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGS-VEMGEKYFNSMTADYKISPETDHYA----CMID 537
EM+ G++PD T ++S C S V +G + M Y + +H A +I
Sbjct: 374 EMIRGGLRPDEATLSVVISI---CASLVALG---YGKMVHLYAVKTGFEHDALVMSSLIS 427
Query: 538 LYGRANQLEKAIEFMK 553
+Y + + +A + K
Sbjct: 428 MYSKCGLIAEASQVFK 443
Score = 42.4 bits (98), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 106/254 (41%), Gaps = 35/254 (13%)
Query: 11 ICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSH 70
+ H+ A+K G + + LI +YSK L+ E+ ++F + +R+ +WN +I+
Sbjct: 405 MVHLYAVKTGFEHDALVMSSLISMYSKCGLIAEASQVFKLLVQRDTVTWNAMIATYAYHG 464
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEAD---ALKLFIEMQSADEHI--RMDE 125
+A LF+ ++ ++A ++ D + F MQ D ++ R D
Sbjct: 465 MASEALKLFNKMTKDGFRPDHATFLSVLSACAHKGDLYEGCRYFRSMQE-DWNLTPRSDH 523
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
++ L L +GF Q + F K +D +++ ++S C + G
Sbjct: 524 YSCMVDL-----LGRLGFIYQAYDFTRKIPSD---LQINAWETLFSACNAH--------G 567
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
+ +I+K+ + A +G M L + E+ W++ S V+ E+GLK
Sbjct: 568 DVQLGEVIAKDVLQARPS-DGGMYTLLANIYASKEM-----WSSAAS--VRGVMKEQGLK 619
Query: 246 LFVRMGENGVRWNE 259
E G W E
Sbjct: 620 -----KETGCSWVE 628
>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
Length = 1029
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 206/673 (30%), Positives = 329/673 (48%), Gaps = 90/673 (13%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
MR +L+ V + A + L ++ + +H + N + + ++F N
Sbjct: 419 MRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSM-----------DADLFVAN 467
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
++ K + A++LF P KD V++N+++ G + E E +A+ + M+
Sbjct: 468 AMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNE-EEEEAVYMLKRMKCYG-- 524
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVK---TSNDASGFAVSSLIDMYSKCRCYE 177
I DE + + +N C + G+Q+H +K SN A G SSLID+YSK
Sbjct: 525 IAPDEVSFATAINACSNIRATETGKQIHCASIKYNVCSNHAVG---SSLIDLYSKF---- 577
Query: 178 EACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQN 237
G++E + K + + V N LI+G VQN
Sbjct: 578 ----------------------------GDVESSRKVL-AHVDASSMVPINALITGLVQN 608
Query: 238 GDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVS 297
+E ++LF ++ ++G + + TFAS LS C G + K++HS+ LK+ L+ N S
Sbjct: 609 NREDEAIELFQQVLKDGFKPSNFTFASILSGCTGPVSSVIGKQVHSYTLKSALL-NQDTS 667
Query: 298 SGI--VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKN 355
GI V +Y KC+ + A +L E H KN
Sbjct: 668 LGISLVGIYLKCKLLEDANKLL------------------------AEVPDH------KN 697
Query: 356 VVVWTALFSGYVKAQNCEALFDLLSEF-VTKEGVVTDALILVILLGACALQAALHPGKEI 414
+V WTA SGY AQN + L+ + + V +D +L AC+ AAL GKEI
Sbjct: 698 LVEWTATISGY--AQNGYSDQSLVMFWRMRSHDVRSDEATFASVLKACSEIAALTDGKEI 755
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFI-ERDLVLYNVMIACYAHHGH 473
H I++ G + S L+DMYSKCG++ + IF+ +++++ +N MI +A +G+
Sbjct: 756 HGLIIKSGFVSYETAASALMDMYSKCGDVISSFEIFKELKNKQNIMPWNSMIVGFAKNGY 815
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA 533
+A+LLF++M E +KPD VT + +L A H G + G F+SM+ Y I P DHYA
Sbjct: 816 ANEALLLFQKMQESQLKPDEVTLLGVLIACSHAGLISEGRNLFDSMSQVYGIVPRVDHYA 875
Query: 534 CMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGN 593
C+IDL GR L++A E + +P D VI +FL C+++++ E A +KL+ +E
Sbjct: 876 CLIDLLGRGGHLQEAQEVIDQLPFRADGVIWATFLAACQMHKDEERGKVAAKKLVEMEPQ 935
Query: 594 NKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPK 653
+ YV L++++AA GNW E R+ MR +F GCSW+ V ++ ++F V D HP
Sbjct: 936 RSSTYVFLSSLHAAAGNWVEAKVAREAMREKGVMKFPGCSWITVGNKTNLFVVQDTHHPD 995
Query: 654 TNAIYSVLAIFTG 666
T IY +L TG
Sbjct: 996 TLGIYKMLDDLTG 1008
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 126/491 (25%), Positives = 220/491 (44%), Gaps = 72/491 (14%)
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
D+F + L+ C +L + GRQ+H ++K+ +S F + L+DMY+KC ++A RVF
Sbjct: 159 DQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKDARRVF 218
Query: 184 EG--CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDA----------------- 224
+G C + + S M+A R G + AL F R ++ A
Sbjct: 219 DGIACPDTICWAS---MIAGYHRVGRYQQALALFSRMEKMGSAPDQVTYVTIISTLASMG 275
Query: 225 -----------------VSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALS 267
V+WN +IS Y Q+G E L+ M G+ TFAS LS
Sbjct: 276 RLSDARTLLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLS 335
Query: 268 ACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFS 327
A + ++IH+ +K+GL +N FV S ++++Y K
Sbjct: 336 AAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVK--------------------- 374
Query: 328 ISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEG 387
G + +A++ FD TEKN+V+W A+ G+V+ E + +++ +
Sbjct: 375 ----------HGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMF-QYMRRAD 423
Query: 388 VVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAE 447
+ D V +LGAC +L G+++H ++ + D + + ++DMYSK G + A+
Sbjct: 424 LEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAK 483
Query: 448 IIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCG 507
+F +D V +N +I AH+ EE+A+ + + M GI PD V+F ++A +
Sbjct: 484 ALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIR 543
Query: 508 SVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSF 567
+ E G K + + Y + + +IDLY + +E + + + + I
Sbjct: 544 ATETG-KQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALI 602
Query: 568 LNVCRLNRNAE 578
+ + NR E
Sbjct: 603 TGLVQNNREDE 613
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 134/592 (22%), Positives = 254/592 (42%), Gaps = 103/592 (17%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN----- 60
L++ H +K+G + L+ +Y+K ++++R++FD + + W
Sbjct: 176 LEQGRQVHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAG 235
Query: 61 ------------------------------TIISACIKSHDLKQARSLFDSSPHKDLVTY 90
TIIS L AR+L V +
Sbjct: 236 YHRVGRYQQALALFSRMEKMGSAPDQVTYVTIISTLASMGRLSDARTLLKRIQMPSTVAW 295
Query: 91 NSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAF 150
N+++ Y + G E++ L+ +M+ + + T S L+ + G+Q+HA
Sbjct: 296 NAVISSY-SQSGLESEVFGLYKDMKR--QGLMPTRSTFASMLSAAASMTAFDEGQQIHAA 352
Query: 151 MVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEM 210
VK DA+ F SSLI++Y K C +A +VF+ TE+
Sbjct: 353 AVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEK--------------------- 391
Query: 211 ALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACC 270
+ V WN ++ G+VQN EE +++F M + ++ TF S L AC
Sbjct: 392 ------------NIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACI 439
Query: 271 GLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISS 330
L ++ +++H +KN + ++ FV++ ++D+Y K ++ A+++ L ++S S ++
Sbjct: 440 NLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNA 499
Query: 331 MIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVT 390
+IVG L N EE E+ V + +K C G+
Sbjct: 500 LIVG--LAHNEEE---------EEAVYM--------LKRMKC-------------YGIAP 527
Query: 391 DALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIF 450
D + + AC+ A GK+IH ++ V + + S+L+D+YSK G++ + +
Sbjct: 528 DEVSFATAINACSNIRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVL 587
Query: 451 QNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVE 510
+ +V N +I + E++AI LF+++L+ G KP TF +ILS S
Sbjct: 588 AHVDASSMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFASILSGCTGPVSSV 647
Query: 511 MGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAV 562
+G++ + ++ +T ++ +Y + LE A + + +P ++ V
Sbjct: 648 IGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPDHKNLV 699
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 176/381 (46%), Gaps = 52/381 (13%)
Query: 230 LISGYVQNGDAEEGLKLFVRMG-ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKN 288
++S + ++G + L F R+ G ++ A LSAC L ++ +++H VLK+
Sbjct: 130 VLSCHARSGSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKS 189
Query: 289 GLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGY------------- 335
G S+ F +G+VD+Y KC + A + ++ +SMI GY
Sbjct: 190 GFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALF 249
Query: 336 ----------------------SLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE 373
+ G + +AR + + V W A+ S Y ++
Sbjct: 250 SRMEKMGSAPDQVTYVTIISTLASMGRLSDARTLLKRIQMPSTVAWNAVISSYSQSGLES 309
Query: 374 ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL 433
+F L + + ++G++ +L A A A G++IHA ++ G+ + + S+L
Sbjct: 310 EVFGLYKD-MKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSL 368
Query: 434 VDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDA 493
+++Y K G ++ A+ +F E+++V++N M+ + + +E+ I +F+ M ++ D
Sbjct: 369 INLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADD 428
Query: 494 VTFVAILSAFRHCGSVEMGEKYF-----NSMTADYKISPETDHYACMIDLYGRANQLEKA 548
TFV++L A + S+++G + NSM AD ++ M+D+Y + ++ A
Sbjct: 429 FTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVA------NAMLDMYSKLGAIDVA 482
Query: 549 IEFMKSIPTEE----DAVILG 565
IP ++ +A+I+G
Sbjct: 483 KALFSLIPGKDSVSWNALIVG 503
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 414 IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQ--NFIERDLVLYNVMIACYAHH 471
+HA +LR+G+ + +L LVD+Y + G + YA + +++C+A
Sbjct: 78 LHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSVLSCHARS 137
Query: 472 GHEEKAILLFEEM-LEKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
G + F+ + G PD +LSA G++E G +
Sbjct: 138 GSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQ 181
>gi|334185017|ref|NP_186807.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546765|sp|Q9SS97.2|PP205_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g01580
gi|332640170|gb|AEE73691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 183/649 (28%), Positives = 314/649 (48%), Gaps = 81/649 (12%)
Query: 16 AIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQA 75
A+KA L + ++IH + K ++ S +++ +++I IK + +A
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDVTLGS----------DLYVGSSLIYMYIKCGRMIEA 115
Query: 76 RSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLC 135
+FD D+VT++SM+ G+ G A++ F M A + + D T+ + ++ C
Sbjct: 116 LRMFDELEKPDIVTWSSMVSGF-EKNGSPYQAVEFFRRMVMASD-VTPDRVTLITLVSAC 173
Query: 136 VKLLNVGFGRQLHAFMVKT--SNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLI 193
KL N GR +H F+++ SND S V+SL++ Y+K R ++EA +F+ E+
Sbjct: 174 TKLSNSRLGRCVHGFVIRRGFSNDLS--LVNSLLNCYAKSRAFKEAVNLFKMIAEK---- 227
Query: 194 SKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGEN 253
D +SW+T+I+ YVQNG A E L +F M ++
Sbjct: 228 -----------------------------DVISWSTVIACYVQNGAAAEALLVFNDMMDD 258
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA 313
G N T L AC +++ ++ H ++ GL + VS+ +VD+Y KC
Sbjct: 259 GTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKC------ 312
Query: 314 ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE 373
FS EEA F + K+VV W AL SG+
Sbjct: 313 ------------FS-------------PEEAYAVFSRIPRKDVVSWVALISGFTLNGMAH 347
Query: 374 ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL 433
+ S + + DA+++V +LG+C+ L K H+Y+++ G + + ++L
Sbjct: 348 RSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASL 407
Query: 434 VDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG-IKPD 492
V++YS+CG++ A +F +D V++ +I Y HG KA+ F M++ +KP+
Sbjct: 408 VELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPN 467
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
VTF++ILSA H G + G + F M DY+++P +HYA ++DL GR L+ AIE
Sbjct: 468 EVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEIT 527
Query: 553 KSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWA 612
K +P ILG+ L CR+++N E+A +KL LE N+ Y+ ++NVY +G W
Sbjct: 528 KRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWE 587
Query: 613 EMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+ ++R ++ + S + + ++H F D HP+ +Y +L
Sbjct: 588 NVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLL 636
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/418 (25%), Positives = 185/418 (44%), Gaps = 46/418 (11%)
Query: 227 WNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVL 286
WNTL+ + EE L F M + + + T AL AC LR V + IH +V
Sbjct: 28 WNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIHGFVK 87
Query: 287 KN-GLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEAR 345
K+ L S+ +V S ++ +Y KC G M EA
Sbjct: 88 KDVTLGSDLYVGSSLIYMYIKC-------------------------------GRMIEAL 116
Query: 346 RHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQ 405
R FD L + ++V W+++ SG+ K + + V V D + L+ L+ AC
Sbjct: 117 RMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKL 176
Query: 406 AALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMI 465
+ G+ +H +++R G D L+++L++ Y+K A +F+ E+D++ ++ +I
Sbjct: 177 SNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVI 236
Query: 466 ACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKI 525
ACY +G +A+L+F +M++ G +P+ T + +L A +E G K + + +
Sbjct: 237 ACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKT-HELAIRKGL 295
Query: 526 SPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEE 585
E ++D+Y + E+A IP +D V + ++ LN A + E E
Sbjct: 296 ETEVKVSTALVDMYMKCFSPEEAYAVFSRIP-RKDVVSWVALISGFTLNGMAHRSIE-EF 353
Query: 586 KLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQ--------MRGMKGNRFAGCSWV 635
++ LE N + + + V G+ +E+G + + G N F G S V
Sbjct: 354 SIMLLENNTRPDAILMVKVL---GSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLV 408
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 109/469 (23%), Positives = 189/469 (40%), Gaps = 108/469 (23%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H I+ G + N L++ Y+K +E+ LF + E++V SW+T+I+ +++
Sbjct: 186 HGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQN--- 242
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
G A+AL +F +M D+ + TV L
Sbjct: 243 -----------------------------GAAAEALLVFNDMM--DDGTEPNVATVLCVL 271
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C ++ GR+ H ++ + ++L+DMY KC EEA VF
Sbjct: 272 QACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFS-------- 323
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF-VRMG 251
R P D VSW LISG+ NG A ++ F + +
Sbjct: 324 ------------------------RIPR-KDVVSWVALISGFTLNGMAHRSIEEFSIMLL 358
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
EN R + L +C L ++ AK HS+V+K G SNPF+ + +V++Y +C
Sbjct: 359 ENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRC---- 414
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY-VKAQ 370
G++ A + F+ + K+ VVWT+L +GY + +
Sbjct: 415 ---------------------------GSLGNASKVFNGIALKDTVVWTSLITGYGIHGK 447
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL---RMGVQMDK 427
+AL + + V V + + + +L AC+ +H G I ++ R+ ++
Sbjct: 448 GTKAL-ETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEH 506
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQN--FIERDLVLYNVMIACYAHHGHE 474
+ LVD+ + G++ A I + F +L ++ AC H E
Sbjct: 507 --YAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGE 553
>gi|255551609|ref|XP_002516850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543938|gb|EEF45464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 623
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 187/618 (30%), Positives = 316/618 (51%), Gaps = 12/618 (1%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
N+F + ISA S + AR LFD P++D V +NSM+ Y + G+ +AL +F +M
Sbjct: 4 NLFRITSKISALGSSGYIVHARKLFDEMPNRDTVAWNSMITSY-SQLGFHQEALSIFYQM 62
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
++ + + D FT T+TL+ C + FG ++HA ++ +S +SLIDMY KC
Sbjct: 63 RNTN--TKPDHFTFTATLSACAGAGSFPFGTKIHALVIILGYHSSLPVNNSLIDMYGKCF 120
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
A +VF+ ++N +S +++ A G A + F P + ++WNT+I+G
Sbjct: 121 DAFSAGQVFKE-MGDINEVSWCSLLFAYTNSGRFSEASEIFNLMPRKFE-IAWNTMIAGL 178
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
+ G+ E L +F M E+ + ++ T+++ +SAC +H V+++G S
Sbjct: 179 GRYGEIELCLDMFREMRESLLEPDQWTYSALISACTESLEFLSGCMLHGLVIRSGWSSAM 238
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
+ I+ +Y K ++N A ++ G S +++I Y G + EA F SL EK
Sbjct: 239 EAKNSILSLYAKFGSLNDALKVVESTGRLTQVSWNAIIDAYMKVGYVNEAYLMFQSLPEK 298
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEG--VVTDALILVILLGACALQAALHPGK 412
N+V WT++ +GY + E + L FV + D +L AC+ A L G+
Sbjct: 299 NIVSWTSMITGYARNGYGE---EALRFFVAMASNCFLPDDFTFGAVLHACSSLAVLGHGR 355
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
+H +R G + + LV+MY+KCG++ + + F + +DLV +N ++ + HG
Sbjct: 356 MVHGCAIRNGFSTYLYVGNGLVNMYAKCGDLDGSILAFHDICAKDLVSFNALLFAFGLHG 415
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
+A+ L+E+M+ G KPD +TF+ +L H G +E G +FNSM + + +S E DH
Sbjct: 416 KASEALQLYEDMMTCGTKPDKMTFIGLLMTCSHSGLIEEGRLFFNSMKSVHGLSYEADHV 475
Query: 533 ACMIDLYGRANQLEKAIEFMK--SIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRL 590
ACM+D+ GR L +A E +K S ++ +A + L C + E+ + L L
Sbjct: 476 ACMVDMLGRGGYLAEAKELVKKYSKTSDVEASSCEALLGACSAHGEVEMGTYLGKTLKTL 535
Query: 591 EGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVS 650
E N + YV +N+Y G W E +RK M + GCSW+ V +++ F G+
Sbjct: 536 EPNKEISYVLQSNLYCVRGQWKEAEMVRKAMVDEGLKKMPGCSWIEVRNKVTAFVAGNHL 595
Query: 651 HPKTNAIYSVLAIFTGEL 668
+P T+ +Y L E+
Sbjct: 596 YPYTDELYKTLYFLEFEM 613
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 172/341 (50%), Gaps = 9/341 (2%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H I G + N LI +Y K + ++F EM + N SW +++ A S
Sbjct: 94 HALVIILGYHSSLPVNNSLIDMYGKCFDAFSAGQVFKEMGDINEVSWCSLLFAYTNSGRF 153
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+A +F+ P K + +N+M+ G + G L +F EM+ + + D++T ++ +
Sbjct: 154 SEASEIFNLMPRKFEIAWNTMIAG-LGRYGEIELCLDMFREMR--ESLLEPDQWTYSALI 210
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C + L G LH ++++ ++ A +S++ +Y+K +A +V E T +
Sbjct: 211 SACTESLEFLSGCMLHGLVIRSGWSSAMEAKNSILSLYAKFGSLNDALKVVES-TGRLTQ 269
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+S NA++ A + G + A F PE N VSW ++I+GY +NG EE L+ FV M
Sbjct: 270 VSWNAIIDAYMKVGYVNEAYLMFQSLPEKN-IVSWTSMITGYARNGYGEEALRFFVAMAS 328
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
N ++ TF + L AC L + + +H ++NG + +V +G+V++Y KC +++
Sbjct: 329 NCFLPDDFTFGAVLHACSSLAVLGHGRMVHGCAIRNGFSTYLYVGNGLVNMYAKCGDLD- 387
Query: 313 AESMLLLKGV--RNSFSISSMIVGYSLQGNMEEARRHFDSL 351
S+L + ++ S ++++ + L G EA + ++ +
Sbjct: 388 -GSILAFHDICAKDLVSFNALLFAFGLHGKASEALQLYEDM 427
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 117/267 (43%), Gaps = 36/267 (13%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTI 62
SL + H I++G + N ++ +Y+K L ++ K+ + SWN I
Sbjct: 216 SLEFLSGCMLHGLVIRSGWSSAMEAKNSILSLYAKFGSLNDALKVVESTGRLTQVSWNAI 275
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
I A +K + +A +F S P K++V++ SM+ GY GY +AL+ F+ M A
Sbjct: 276 IDAYMKVGYVNEAYLMFQSLPEKNIVSWTSMITGYAR-NGYGEEALRFFVAM--ASNCFL 332
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
D+FT + L+ C L +G GR +H ++ + + L++MY+KC
Sbjct: 333 PDDFTFGAVLHACSSLAVLGHGRMVHGCAIRNGFSTYLYVGNGLVNMYAKC--------- 383
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
G+++ ++ F D VS+N L+ + +G A E
Sbjct: 384 -----------------------GDLDGSILAF-HDICAKDLVSFNALLFAFGLHGKASE 419
Query: 243 GLKLFVRMGENGVRWNEHTFASALSAC 269
L+L+ M G + ++ TF L C
Sbjct: 420 ALQLYEDMMTCGTKPDKMTFIGLLMTC 446
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 182/610 (29%), Positives = 304/610 (49%), Gaps = 76/610 (12%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
+ +I ++ DL AR +FD K +V + ++ Y+ E E +A+++F++ ++
Sbjct: 192 SALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAE-EAVEIFLDF--LED 248
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
D +T++S ++ C +L +V G QLH+ ++ + L+DMY+K
Sbjct: 249 GFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNI---- 304
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
E M+ A K F R + ND +SW LISGYVQ+G
Sbjct: 305 -------------------------EQAMDYANKVFERMRK-NDVISWTALISGYVQSGV 338
Query: 240 AEEG-LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
E + LF M ++ N T++S L AC + + +++H+ V+K+ + V +
Sbjct: 339 QENKVMVLFGEMLNESIKPNHITYSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGN 398
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
+V +Y AES G MEEARR F+ L E++++
Sbjct: 399 ALVSMY--------AES-----------------------GCMEEARRVFNQLYERSMI- 426
Query: 359 WTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
S + ++ L + + + + L+ A A L G+++HA
Sbjct: 427 -----SCITEGRDAP-----LDHRIGRMDMGISSSTFASLISAAASVGMLTKGQQLHAMT 476
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
L+ G D+ + ++LV MYS+CG + A F +R+++ + MI+ A HG+ E+A+
Sbjct: 477 LKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERAL 536
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
LF +M+ G+KP+ VT++A+LSA H G V G++YF SM D+ + P +HYACM+DL
Sbjct: 537 SLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDL 596
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARY 598
R+ +++A+EF+ +P + DA++ + L CR + N E+ A + ++ LE + A Y
Sbjct: 597 LARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIELEPRDPAPY 656
Query: 599 VQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
V L+N+YA G W E+ RIR MR N+ G SW+ VE+ H F GD SHP+ IY
Sbjct: 657 VLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIY 716
Query: 659 SVLAIFTGEL 668
L GE+
Sbjct: 717 GKLDTLVGEI 726
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 165/375 (44%), Gaps = 41/375 (10%)
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
R+ G + + + N+++ R G + A F L D VSW + S +NG
Sbjct: 73 RLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAE 132
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVL--KNGLISNPF-VS 297
E L L M E+G+ N +T A++ C + C L K GL V
Sbjct: 133 RESLLLIGEMLESGLLPNAYTLC-AVAHACFPHELYCLVGGVVLGLVHKMGLWGTDIAVG 191
Query: 298 SGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVV 357
S ++D+ + G++ AR+ FD L EK VV
Sbjct: 192 SALIDMLAR-------------------------------NGDLASARKVFDGLIEKTVV 220
Query: 358 VWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
VWT L S YV+ + E ++ +F+ ++G D + ++ AC ++ G ++H+
Sbjct: 221 VWTLLISRYVQGECAEEAVEIFLDFL-EDGFEPDRYTMSSMISACTELGSVRLGLQLHSL 279
Query: 418 ILRMGVQMDKKLISTLVDMYSKCG---NMTYAEIIFQNFIERDLVLYNVMIACYAHHG-H 473
LRMG D + LVDMY+K M YA +F+ + D++ + +I+ Y G
Sbjct: 280 ALRMGFASDACVSCGLVDMYAKSNIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQ 339
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA 533
E K ++LF EML + IKP+ +T+ +IL A + + G + + + + T A
Sbjct: 340 ENKVMVLFGEMLNESIKPNHITYSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNA 399
Query: 534 CMIDLYGRANQLEKA 548
++ +Y + +E+A
Sbjct: 400 -LVSMYAESGCMEEA 413
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 59/102 (57%), Gaps = 5/102 (4%)
Query: 408 LHPGKEIHAYILRMGVQMDKKLI--STLVDMYSKCGNMTYAEIIFQNFIE-RDLVLYNVM 464
L G+ +H +LR G +D+ + ++L+ +YS+CG + A +F RD+V + M
Sbjct: 64 LRLGRALHRRLLR-GDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAM 122
Query: 465 IACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA-FRH 505
+C A +G E +++LL EMLE G+ P+A T A+ A F H
Sbjct: 123 ASCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPH 164
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +KAG +N L+ +YS+ L ++ + F+E+ +RNV SW ++IS K
Sbjct: 473 HAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYA 532
Query: 73 KQARSLF 79
++A SLF
Sbjct: 533 ERALSLF 539
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 182/610 (29%), Positives = 304/610 (49%), Gaps = 70/610 (11%)
Query: 50 EMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALK 109
++ E ++ +I+ + DL+ AR FD K LVT+N+++ GY + G ALK
Sbjct: 88 QLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGY-SRNGDHRGALK 146
Query: 110 LFIEMQS-ADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLID 168
++ +M S + E ++ D T +S L C + ++ GR++ A V + + ++LI+
Sbjct: 147 IYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALIN 206
Query: 169 MYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWN 228
MYSKC G +E A K F R D ++WN
Sbjct: 207 MYSKC--------------------------------GSLESARKVFDRLKN-RDVIAWN 233
Query: 229 TLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKN 288
T+ISGY + G A + L+LF RMG N + N TF L+AC L +++ + IH V ++
Sbjct: 234 TMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEH 293
Query: 289 GLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHF 348
G S+ + + ++++Y KC + ++EEAR+ F
Sbjct: 294 GYESDLVIGNVLLNMYTKCSS------------------------------SLEEARQVF 323
Query: 349 DSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAAL 408
+ L ++V+ W L YV+ + D+ + + E V + + L +L ACA+ A
Sbjct: 324 ERLRTRDVITWNILIVAYVQYGQAKDALDIFKQ-MQLENVAPNEITLSNVLSACAVLGAK 382
Query: 409 HPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACY 468
GK +HA I + D L ++L++MY++CG++ +F ++ LV ++ +IA Y
Sbjct: 383 RQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAY 442
Query: 469 AHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE 528
A HGH + F E+L++G+ D VT V+ LSA H G ++ G + F SM D+ ++P+
Sbjct: 443 AQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPD 502
Query: 529 TDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLL 588
H+ CM+DL RA +LE A + +P DAV S L+ C+L+ + + A +KL
Sbjct: 503 YRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLF 562
Query: 589 RLEGNNKARYVQ-LANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVG 647
LE ++ V L+NVYA G W ++ + R + R + N GCS++ + +H F G
Sbjct: 563 ELESEDEHSTVTLLSNVYAEAGRWDDVRKTRNR-RAARKN--PGCSYIEINDTVHEFVAG 619
Query: 648 DVSHPKTNAI 657
D SHP+ I
Sbjct: 620 DKSHPEEELI 629
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 148/310 (47%), Gaps = 35/310 (11%)
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASA 265
G + AL F E ++VSW +++ + +NG E L + RM G+R + F A
Sbjct: 6 GSVADALAVF-HAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVA 64
Query: 266 LSACCGLRNVKCAKEIHSWVLKNGLIS-NPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
+ C +++K + +H+ +L+ L+ + + + ++ +Y +C ++ A R
Sbjct: 65 IGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELA---------RK 115
Query: 325 SFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVT 384
+F D + +K +V W AL +GY + + + + V+
Sbjct: 116 TF----------------------DEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVS 153
Query: 385 K--EGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGN 442
K EG+ DA+ L AC++ + G+EI A + G D + + L++MYSKCG+
Sbjct: 154 KSPEGMKPDAITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGS 213
Query: 443 MTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
+ A +F RD++ +N MI+ YA G +A+ LF+ M KP+ VTF+ +L+A
Sbjct: 214 LESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTA 273
Query: 503 FRHCGSVEMG 512
+ +E G
Sbjct: 274 CTNLEDLEQG 283
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 134/313 (42%), Gaps = 73/313 (23%)
Query: 15 QAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQ 74
+ + +G +I N LI++YSK L +RK+FD + R+V +WNT+IS K Q
Sbjct: 188 RTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQ 247
Query: 75 ARSLFD----SSPHKDLVTYNSMLCGYINAE---------------GYEAD--------- 106
A LF + P ++VT+ +L N E GYE+D
Sbjct: 248 ALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLN 307
Query: 107 -----------ALKLFIEMQSAD-----------------------------EHIRMDEF 126
A ++F +++ D E++ +E
Sbjct: 308 MYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEI 367
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
T+++ L+ C L G+ +HA + A +SL++MY++C ++ VF
Sbjct: 368 TLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAI 427
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFW---RQPELNDAVSWNTLISGYVQNGDAEEG 243
++ +L+S + ++AA + G L+ FW ++ D V+ + +S G +EG
Sbjct: 428 RDK-SLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEG 486
Query: 244 LKLFVRM-GENGV 255
++ F+ M G++G+
Sbjct: 487 VQSFLSMVGDHGL 499
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 52/113 (46%)
Query: 436 MYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVT 495
MY KCG++ A +F + V + +++A +A +GH +A+ + M+ +G++PD
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 496 FVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
FV + ++ G+ + + + +I +Y R LE A
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELA 113
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 191/612 (31%), Positives = 304/612 (49%), Gaps = 78/612 (12%)
Query: 55 NVFSWNTIISACI--KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
+ F+ + I++ C +S L+ AR +F P+ T NS++ G + ++ +AL +
Sbjct: 19 DPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCTDKNLHQ-EALLFYQ 77
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
EM + + D +T S C N G+Q+H K + +A ++L++MYS
Sbjct: 78 EMMV--QGLIPDRYTFPSLFKSC---RNSSEGKQIHCHSTKLGFASDTYAQNTLMNMYSN 132
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C C A +VF+ +M KT VSW T+I
Sbjct: 133 CGCLVSARKVFD------------------------KMEDKT---------VVSWATMIG 159
Query: 233 GYVQNGDAEEGLKLFVRMGEN-GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI 291
+ Q E ++LF RM ++ V+ NE T + L+AC R++ K IH ++ ++G
Sbjct: 160 VHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFG 219
Query: 292 SNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL 351
+ +++ ++DVYCKC G ++ AR FD
Sbjct: 220 RHVVLNTVLMDVYCKC-------------------------------GCVQLARDLFDKA 248
Query: 352 TEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG 411
EKN+ W + +G+V+ N E L E TK G+ D + + LL AC AL G
Sbjct: 249 QEKNLFSWNIMINGHVEDSNYEEALLLFREMQTK-GIKGDKVTMASLLLACTHLGALELG 307
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
K +HAYI + + +D L + LVDMY+KCG++ A +F E+D++ + +I A
Sbjct: 308 KWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMC 367
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH 531
G E A+ F+EM KG+KPDA+TFV +L+A H G V+ G +FNSM+ Y I P +H
Sbjct: 368 GQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEH 427
Query: 532 YACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLE 591
Y ++D+ GRA ++ +A E +KS+P D +LG L CR++ N E A A ++LL ++
Sbjct: 428 YGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAERAAKQLLEID 487
Query: 592 GNNKARYVQLANVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDV 649
+ YV L+N+Y + W E R R+ M RGM+ + GCS + V +H F GD
Sbjct: 488 PYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMR--KPPGCSQIEVHGVVHEFVKGDS 545
Query: 650 SHPKTNAIYSVL 661
SH +++ I +L
Sbjct: 546 SHRQSSEINEML 557
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 117/490 (23%), Positives = 199/490 (40%), Gaps = 112/490 (22%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
N E H + K G T N L+++YS L +RK+FD+M ++ V SW T+I
Sbjct: 100 NSSEGKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIG 159
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
+ +A LFD M+S E+++ +
Sbjct: 160 VHAQWDQPNEAVRLFDRM-------------------------------MKS--ENVKPN 186
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV-----SSLIDMYSKCRCYEEA 179
E T+ + L C + ++ +++H ++ D GF + L+D+Y KC C + A
Sbjct: 187 EVTLVNVLTACARARDLAMVKRIHEYI-----DEHGFGRHVVLNTVLMDVYCKCGCVQLA 241
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
+F+ +E NL SWN +I+G+V++ +
Sbjct: 242 RDLFDK-AQEKNLF--------------------------------SWNIMINGHVEDSN 268
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
EE L LF M G++ ++ T AS L AC L ++ K +H+++ K + + + +
Sbjct: 269 YEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTA 328
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
+VD+Y KC G++E A + F + EK+V+ W
Sbjct: 329 LVDMYAKC-------------------------------GSIETAIQVFHEMPEKDVMTW 357
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG-KEIHAYI 418
TAL G E E K GV DA+ V +L AC+ + G ++
Sbjct: 358 TALILGLAMCGQAENALQYFDEMHIK-GVKPDAITFVGVLAACSHAGFVDEGISHFNSMS 416
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQN--FIERDLVLYNVMIACYAHHGHEEK 476
G+Q + LVD+ + G + AE + ++ VL ++ AC HG+ E
Sbjct: 417 DTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRI-HGNLEA 475
Query: 477 AILLFEEMLE 486
A +++LE
Sbjct: 476 AERAAKQLLE 485
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 108/228 (47%), Gaps = 40/228 (17%)
Query: 279 KEIHSWVLKNGLISNPFVSSGIVDVYCKCE---NMNYAESMLLLKGVRNSFSISSMIVGY 335
K+IH+ +L+ GL +PF +S IV +C + ++ YA + S++ +S+I G
Sbjct: 5 KQIHAQMLRTGLFFDPFTASKIV-AFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRG- 62
Query: 336 SLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALIL 395
T+KN+ + EAL L + + +G++ D
Sbjct: 63 ---------------CTDKNL--------------HQEAL--LFYQEMMVQGLIPDRYTF 91
Query: 396 VILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIE 455
L +C + GK+IH + ++G D +TL++MYS CG + A +F +
Sbjct: 92 PSLFKSCRNSSE---GKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMED 148
Query: 456 RDLVLYNVMIACYAHHGHEEKAILLFEEMLE-KGIKPDAVTFVAILSA 502
+ +V + MI +A +A+ LF+ M++ + +KP+ VT V +L+A
Sbjct: 149 KTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTA 196
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 173/498 (34%), Positives = 263/498 (52%), Gaps = 29/498 (5%)
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
E + +S N M+AA R G +E A F + E D +SWN L+SGYVQ G E +LF
Sbjct: 34 EKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEW-DVISWNALMSGYVQWGKMSEARELFD 92
Query: 249 RM-GENGVRWN----------EHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS----- 292
RM G + V WN + A L +R+V + S +NG++
Sbjct: 93 RMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRV 152
Query: 293 -------NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEAR 345
N + +V Y + M+ A+ + + RN S ++M+ GY+ G +EEA+
Sbjct: 153 FDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAK 212
Query: 346 RHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQ 405
FD++ +K+ V W A+ + Y + E L E + + G + +L CA
Sbjct: 213 AVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIE-MGRCGEWVNRSAFACVLSTCADI 271
Query: 406 AALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMI 465
AAL G ++H ++R G + + + L+ MY KCGNM A F+ ERD+V +N MI
Sbjct: 272 AALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMI 331
Query: 466 ACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKI 525
A YA HG ++A+ +F+ M KPD +T V +L+A H G VE G YF SM D+ +
Sbjct: 332 AGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGV 391
Query: 526 SPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEE 585
+ + +HY CMIDL GRA +L +A + MK +P E D+ + G+ L R++RN EL A E
Sbjct: 392 TAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAE 451
Query: 586 KLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHI 643
K+ LE N YV L+N+YA+ G W + ++R M RG+K + G SW+ V++++H
Sbjct: 452 KIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVK--KVPGFSWIEVQNKVHT 509
Query: 644 FTVGDVSHPKTNAIYSVL 661
F+ GD HP+ IY+ L
Sbjct: 510 FSAGDCVHPEKEKIYAFL 527
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 130/520 (25%), Positives = 230/520 (44%), Gaps = 100/520 (19%)
Query: 25 TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPH 84
++T N +I ++ H L+ +R FD PE++ SWN +++A +++ +++AR LF+S
Sbjct: 6 SVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTE 65
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
D++++N+++ GY+ G ++A +LF M D + N+ V G+
Sbjct: 66 WDVISWNALMSGYVQW-GKMSEARELFDRMPGRD----------VVSWNIMVS----GYA 110
Query: 145 RQLHAFMVKTSNDASG----FAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVA 200
R+ + DA+ F ++++ Y++ EEA RVF+ E N +S NAMVA
Sbjct: 111 RRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER-NAVSWNAMVA 169
Query: 201 A-----------------CCRE--------------GEMEMALKTFWRQPELNDAVSWNT 229
A CR G +E A F P+ DAVSW
Sbjct: 170 AYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQ-KDAVSWAA 228
Query: 230 LISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG 289
+++ Y Q G +EE L+LF+ MG G N FA LS C + ++C ++H +++ G
Sbjct: 229 MLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAG 288
Query: 290 LISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFD 349
FV + ++ +Y KC NM A RN+F MEE
Sbjct: 289 YGVGCFVGNALLAMYFKCGNMEDA---------RNAFE------------EMEE------ 321
Query: 350 SLTEKNVVVWTALFSGYVK---AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQA 406
++VV W + +GY + + +FD++ TK D + LV +L AC+
Sbjct: 322 ----RDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTK----PDDITLVGVLAACSHSG 373
Query: 407 ALHPGKEIHAYILRM----GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLY 461
+ G +Y M GV + + ++D+ + G + A + ++ E D ++
Sbjct: 374 LVEKGI---SYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMW 430
Query: 462 NVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
++ H + E E++ E ++P+ +LS
Sbjct: 431 GALLGASRIHRNPELGRSAAEKIFE--LEPENAGMYVLLS 468
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + I+AG + N L+ +Y K + ++R F+EM ER+V SWNT+I+ +
Sbjct: 281 HGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFG 340
Query: 73 KQARSLFD 80
K+A +FD
Sbjct: 341 KEALEIFD 348
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 179/636 (28%), Positives = 312/636 (49%), Gaps = 76/636 (11%)
Query: 38 HNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGY 97
H+ L ++ FD + E +++ +K D++ A +F+ ++V +N ML Y
Sbjct: 268 HSYLLKAGMSFDYITE------GSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAY 321
Query: 98 INAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSND 157
A + ++F +MQ+ H ++FT L C + G Q+H+ +K +
Sbjct: 322 GQISDL-AKSFEIFGQMQATGIH--PNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFE 378
Query: 158 ASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWR 217
+ + LIDMYSK C ++A ++ E
Sbjct: 379 SDMYVSGVLIDMYSKYGCLDKARKILE--------------------------------- 405
Query: 218 QPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKC 277
E D VSW ++I+GYVQ+ EE L F M + GV + ASA SAC G++ ++
Sbjct: 406 MLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQ 465
Query: 278 AKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSL 337
+IH+ V +G ++ + + +V++Y +C
Sbjct: 466 GLQIHARVYVSGYAADISIWNTLVNLYARC------------------------------ 495
Query: 338 QGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ-NCEALFDLLSEFVTKEGVVTDALILV 396
G EEA F + K+ + W L SG+ +++ +AL + + + G + +
Sbjct: 496 -GRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMK--MGQAGAKYNVFTFI 552
Query: 397 ILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER 456
+ A A A + GK++H ++ G + ++ + L+ +Y KCG++ A++IF R
Sbjct: 553 SAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLR 612
Query: 457 DLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYF 516
+ V +N +I + HG +A+ LF++M ++G+KP+ VTF+ +L+A H G VE G YF
Sbjct: 613 NEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYF 672
Query: 517 NSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRN 576
SM+ Y ++P DHYAC++D+ GRA QL++A F+ +P +A+I + L+ C++++N
Sbjct: 673 KSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKN 732
Query: 577 AELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVY 636
E+ A + LL LE ++ A YV L+N YA G WA ++RK M+ + G SW+
Sbjct: 733 IEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIE 792
Query: 637 VEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
V++ +H F VGD HP ++ IY L+ L +I
Sbjct: 793 VKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIG 828
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 131/546 (23%), Positives = 241/546 (44%), Gaps = 73/546 (13%)
Query: 7 KEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPER----NVFSWNTI 62
KEA + Q + T + ++ +K L + R + ++ ++ F N +
Sbjct: 126 KEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNAL 185
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
I+ + K A +F D VT+N+++ G+ G+ AL++F EMQ + +R
Sbjct: 186 IALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQC-GHGECALQIFDEMQLSG--LR 242
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
D TV S L C + ++ G+QLH++++K SL+D+Y KC
Sbjct: 243 PDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKC--------- 293
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
G++E A F + + V WN ++ Y Q D +
Sbjct: 294 -----------------------GDIETAHDIF-NLGDRTNVVLWNLMLVAYGQISDLAK 329
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
++F +M G+ N+ T+ L C ++ ++IHS +KNG S+ +VS ++D
Sbjct: 330 SFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLID 389
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
+Y K G +++AR+ + L +++VV WT++
Sbjct: 390 MYSK-------------------------------YGCLDKARKILEMLEKRDVVSWTSM 418
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
+GYV+ CE E + GV D + L ACA A+ G +IHA + G
Sbjct: 419 IAGYVQHDFCEEALATFKE-MQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSG 477
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
D + +TLV++Y++CG A +F+ +D + +N +I+ + ++A+++F
Sbjct: 478 YAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFM 537
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRA 542
+M + G K + TF++ +SA + ++ G++ S ET+ +I LYG+
Sbjct: 538 KMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTS-ETEVANALISLYGKC 596
Query: 543 NQLEKA 548
+E A
Sbjct: 597 GSIEDA 602
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 168/366 (45%), Gaps = 47/366 (12%)
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
++L +KN +V + +++ D VSW ++SGY Q+G +E +L+ +
Sbjct: 85 IDLYAKNGLV----------WQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQ 134
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
M V + +S LSAC + + IH+ V K S FV + ++ +Y
Sbjct: 135 MHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALY----- 189
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
+G+ G+ + A R F + + V + L SG+ +
Sbjct: 190 -----------------------LGF---GSFKLAERVFCDMLFCDRVTFNTLISGHAQC 223
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
+ E + E + G+ D + + LL ACA L GK++H+Y+L+ G+ D
Sbjct: 224 GHGECALQIFDE-MQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYIT 282
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+L+D+Y KCG++ A IF ++VL+N+M+ Y K+ +F +M GI
Sbjct: 283 EGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGI 342
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY--ACMIDLYGRANQLEK 547
P+ T+ IL G +E+GE+ +S++ K E+D Y +ID+Y + L+K
Sbjct: 343 HPNQFTYPCILRTCTCTGQIELGEQ-IHSLS--IKNGFESDMYVSGVLIDMYSKYGCLDK 399
Query: 548 AIEFMK 553
A + ++
Sbjct: 400 ARKILE 405
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 142/326 (43%), Gaps = 34/326 (10%)
Query: 224 AVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNV-KCAKEIH 282
A S + ++ ++ + E+ L L + AL AC G N EIH
Sbjct: 7 AASLHRSLAKFIVPDNPEKILSLVAAKASHHRALGSADLTCALQACRGRGNRWPLVLEIH 66
Query: 283 SWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNME 342
+ + GL ++ + + ++D+Y K G +
Sbjct: 67 ATSVVRGLGADRLIGNLLIDLYAK-------------------------------NGLVW 95
Query: 343 EARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGAC 402
+AR+ F L+ ++ V W A+ SGY ++ + F L S+ + V+ +L +L AC
Sbjct: 96 QARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQ-MHWTAVIPTPYVLSSVLSAC 154
Query: 403 ALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYN 462
G+ IHA + + + + + L+ +Y G+ AE +F + + D V +N
Sbjct: 155 TKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFN 214
Query: 463 VMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTAD 522
+I+ +A GH E A+ +F+EM G++PD VT ++L+A G ++ G K +S
Sbjct: 215 TLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKG-KQLHSYLLK 273
Query: 523 YKISPETDHYACMIDLYGRANQLEKA 548
+S + ++DLY + +E A
Sbjct: 274 AGMSFDYITEGSLLDLYVKCGDIETA 299
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
++K+ H +A+K G T T N LI +Y K + +++ +F EM RN SWNTII+
Sbjct: 563 DIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIIT 622
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINA 100
+C + +A LFD + L + G + A
Sbjct: 623 SCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAA 658
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 179/639 (28%), Positives = 313/639 (48%), Gaps = 79/639 (12%)
Query: 41 LRESRKLFDEMPERNVFSWNT-------IISACIKSHDLKQARSLFDSSPHKDLVTYNSM 93
L + +K+ M E W+T I+S K ++ A +FD +++V++ +M
Sbjct: 328 LEQGKKVHARMKE---VGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAM 384
Query: 94 LCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVK 153
+ G+ G +A F +M + I + T S L C + G+Q+ +++
Sbjct: 385 IAGFAQ-HGRIDEAFLFFNKM--IESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIE 441
Query: 154 TSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALK 213
+ ++L+ MY+KC ++A RVFE ISK +VA
Sbjct: 442 AGYGSDDRVRTALLSMYAKCGSLKDAHRVFEK-------ISKQNVVA------------- 481
Query: 214 TFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLR 273
WN +I+ YVQ+ + L F + + G++ N TF S L+ C
Sbjct: 482 -------------WNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSD 528
Query: 274 NVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIV 333
+++ K +H ++K GL S+ VS+ +V ++ C
Sbjct: 529 SLELGKWVHFLIMKAGLESDLHVSNALVSMFVNC-------------------------- 562
Query: 334 GYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDAL 393
G++ A+ F+ + ++++V W + +G+V+ + FD + + + G+ D +
Sbjct: 563 -----GDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYF-KMMQESGIKPDKI 616
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF 453
LL ACA AL G+ +HA I D + + L+ MY+KCG++ A +F
Sbjct: 617 TFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKL 676
Query: 454 IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
++++ + MIA YA HG ++A+ LF +M ++G+KPD +TFV LSA H G +E G
Sbjct: 677 PKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGL 736
Query: 514 KYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRL 573
+F SM ++ I P +HY CM+DL+GRA L +A+EF+ + E D+ + G+ L C++
Sbjct: 737 HHFQSMK-EFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQV 795
Query: 574 NRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCS 633
+ N ELA +A +K L L+ N+ +V L+N+YAA G W E+ ++RK M + G S
Sbjct: 796 HLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQS 855
Query: 634 WVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
W+ V+ ++H F D +HP+T I++ L E+ ++
Sbjct: 856 WIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLG 894
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 128/492 (26%), Positives = 237/492 (48%), Gaps = 74/492 (15%)
Query: 27 TTNQLIHIYSKHNLLRESRKLFDEMP----ERNVFSWNTIISACIKSHDLKQARSLFDSS 82
T + L+ + K L + ++++ + + ++F NT+I+ K + A+ +FD
Sbjct: 112 TYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDM 171
Query: 83 PHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVG 142
KD+ ++N +L GY+ YE +A KL +M + ++ D+ T S LN C NV
Sbjct: 172 REKDVYSWNLLLGGYVQHGLYE-EAFKLHEQM--VQDSVKPDKRTFVSMLNACADARNVD 228
Query: 143 FGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAAC 202
GR+L+ ++K D F ++LI+M+ KC +A +VF+ +L++ +M+
Sbjct: 229 KGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTR-DLVTWTSMITGL 287
Query: 203 CREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTF 262
R G + A LF RM E GV+ ++ F
Sbjct: 288 ARHGRFKQA--------------------------------CNLFQRMEEEGVQPDKVAF 315
Query: 263 ASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA-ESMLLLKG 321
S L AC ++ K++H+ + + G + +V + I+ +Y KC +M A E L+KG
Sbjct: 316 VSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKG 375
Query: 322 VRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSE 381
RN S ++MI G++ G ++EA F+ + E
Sbjct: 376 -RNVVSWTAMIAGFAQHGRIDEAFLFFNKMIE---------------------------- 406
Query: 382 FVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
G+ + + + +LGAC+ +AL G++I +I+ G D ++ + L+ MY+KCG
Sbjct: 407 ----SGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCG 462
Query: 442 NMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
++ A +F+ ++++V +N MI Y H + A+ F+ +L++GIKP++ TF +IL+
Sbjct: 463 SLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILN 522
Query: 502 AFRHCGSVEMGE 513
+ S+E+G+
Sbjct: 523 VCKSSDSLELGK 534
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 138/538 (25%), Positives = 247/538 (45%), Gaps = 119/538 (22%)
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
KD N++L ++ G +A+++ + S+ HI++ T ++ L LC+K N+G G
Sbjct: 73 KDTQKANAVL-NRLSKAGQFNEAMQVLERVDSS--HIQIYRQTYSALLQLCIKFKNLGDG 129
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
+++ + K+ F ++LI+MY+KC A ++F+ E+
Sbjct: 130 ERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREK--------------- 174
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFAS 264
D SWN L+ GYVQ+G EE KL +M ++ V+ ++ TF S
Sbjct: 175 ------------------DVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVS 216
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
L+AC RNV +E+++ +LK G ++ FV + +++++ KC
Sbjct: 217 MLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKC----------------- 259
Query: 325 SFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK----AQNCEALFDLLS 380
G++ +A + FD+L +++V WT++ +G + Q C LF +
Sbjct: 260 --------------GDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACN-LFQRME 304
Query: 381 EFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC 440
E EGV D + V LL AC AL GK++HA + +G + + + ++ MY+KC
Sbjct: 305 E----EGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKC 360
Query: 441 GNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAIL 500
G+M A +F R++V + MIA +A HG ++A L F +M+E GI+P+ VTF++IL
Sbjct: 361 GSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSIL 420
Query: 501 SA-----------------------------------FRHCGSVEMGEKYFNSMTADYKI 525
A + CGS++ + F ++ +
Sbjct: 421 GACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVV 480
Query: 526 SPETDHYACMIDLYGRANQLEKAIEFMKSIPTE---EDAVILGSFLNVCRLNRNAELA 580
+ + MI Y + Q + A+ +++ E ++ S LNVC+ + + EL
Sbjct: 481 A-----WNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELG 533
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 162/333 (48%), Gaps = 37/333 (11%)
Query: 220 ELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAK 279
++ D N +++ + G E +++ R+ + ++ T+++ L C +N+ +
Sbjct: 71 DIKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGE 130
Query: 280 EIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQG 339
I++ + K+G+ + F+ + ++++Y KC G
Sbjct: 131 RIYNHIKKSGVQPDIFMRNTLINMYAKC-------------------------------G 159
Query: 340 NMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILL 399
N A++ FD + EK+V W L GYV+ E F L + V ++ V D V +L
Sbjct: 160 NTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMV-QDSVKPDKRTFVSML 218
Query: 400 GACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLV 459
ACA + G+E++ IL+ G D + + L++M+ KCG++ A +F N RDLV
Sbjct: 219 NACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLV 278
Query: 460 LYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSM 519
+ MI A HG ++A LF+ M E+G++PD V FV++L A H ++E G+K M
Sbjct: 279 TWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARM 338
Query: 520 TADYKISPETDHY--ACMIDLYGRANQLEKAIE 550
++ +T+ Y ++ +Y + +E A+E
Sbjct: 339 K---EVGWDTEIYVGTAILSMYTKCGSMEDALE 368
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 105/243 (43%), Gaps = 38/243 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +KAGL +N L+ ++ L ++ LF++MP+R++ SWNTII+ ++
Sbjct: 537 HFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQ---- 592
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
G A F MQ + I+ D+ T T L
Sbjct: 593 ----------------------------HGKNQVAFDYFKMMQESG--IKPDKITFTGLL 622
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
N C + GR+LHA + + + D + LI MY+KC E+A +VF ++ N+
Sbjct: 623 NACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKK-NV 681
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLI---SGYVQNGDAEEGLKLFVR 249
S +M+A + G + AL+ F++ + W T + S G EEGL F
Sbjct: 682 YSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQS 741
Query: 250 MGE 252
M E
Sbjct: 742 MKE 744
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 100/256 (39%), Gaps = 44/256 (17%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L E H +A + LI +Y+K + ++ ++F ++P++NV+SW
Sbjct: 631 LTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSW------ 684
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
SM+ GY G +AL+LF +MQ E ++ D
Sbjct: 685 -------------------------TSMIAGYAQ-HGRGKEALELFYQMQQ--EGVKPDW 716
Query: 126 FTVTSTLNLCVK--LLNVGFG--RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
T L+ C L+ G + + F ++ + G ++D++ + EA
Sbjct: 717 ITFVGALSACAHAGLIEEGLHHFQSMKEFNIEPRMEHYG----CMVDLFGRAGLLNEAVE 772
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPEL--NDAVSWNTLISGYVQNGD 239
E + A++ AC +E+A K ++ EL ND + L + Y G
Sbjct: 773 FIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGM 832
Query: 240 AEEGLKLFVRMGENGV 255
+E K+ M + GV
Sbjct: 833 WKEVAKMRKVMLDRGV 848
>gi|449433085|ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 601
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 199/671 (29%), Positives = 312/671 (46%), Gaps = 112/671 (16%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
NL + H Q +K+ L + +LI +S + + F+++ NV +NT+I
Sbjct: 32 NLNQVKQLHAQILKSNLHVDLFVVPKLISAFSLCRQMLLATNAFNQVQYPNVHLYNTMIR 91
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
A SH+ S P + T+ +M +G+ AD
Sbjct: 92 A--HSHN---------SQPSQAFATFFAM-----QRDGHYAD------------------ 117
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
FT L +C + + +HA + K + F +SLID YSKC
Sbjct: 118 NFTFPFLLKVCTGNVWLPVIESVHAQIEKFGFMSDVFVPNSLIDSYSKC----------- 166
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
+C + A K F D VSWN++ISG + G EE
Sbjct: 167 ---------------GSC----GISAAKKLFVSMGARRDVVSWNSMISGLAKGGLYEEAR 207
Query: 245 KLFVRMGE-NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
K+F M E +G+ WN ++D
Sbjct: 208 KVFDEMPEKDGISWNT----------------------------------------MLDG 227
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y K M+ A + RN S S+M++GY G+ME AR FD + KN+V WT +
Sbjct: 228 YVKVGKMDDAFKLFDEMPERNVVSWSTMVLGYCKAGDMEMARMLFDKMPVKNLVSWTIIV 287
Query: 364 SGYVK---AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
SG+ + A+ +LFD + + K D ++ +L ACA L G++IHA I
Sbjct: 288 SGFAEKGLAREAISLFDQMEKACLK----LDNGTVMSILAACAESGLLGLGEKIHASIKN 343
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
+ ++ + LVDMY+KCG + A +F + +D+V +N M+ A HGH KA+ L
Sbjct: 344 NNFKCTTEISNALVDMYAKCGRLNIAYDVFNDIKNKDVVSWNAMLQGLAMHGHGVKALEL 403
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
F+ M E+G P+ VT + +L A H G ++ G +YF++M DY + PE +HY CM+DL G
Sbjct: 404 FKRMKEEGFSPNKVTMIGVLCACTHAGLIDDGIRYFSTMERDYTLVPEVEHYGCMVDLLG 463
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQ 600
R +LE+AI ++++P +A+I G+ L CR++ ELA E + L+ LE + +
Sbjct: 464 RKGRLEEAIRLIRNMPMAPNAIIWGTLLGACRMHNAVELAREVLDHLVELEPTDSGNFSM 523
Query: 601 LANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSV 660
L+N+YAA G+W + R +MR + + +G S + V +E+H FTV D SHPK++ IY V
Sbjct: 524 LSNIYAAAGDWNCVANTRLRMRSIGTKKPSGASSIEVNNEVHEFTVFDRSHPKSDNIYQV 583
Query: 661 LAIFTGELYEI 671
+ EL ++
Sbjct: 584 INGLRHELKQV 594
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 120/261 (45%), Gaps = 19/261 (7%)
Query: 306 KCENMNYAESM---LLLKGVR-NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
KC N+N + + +L + + F + +I +SL M A F+ + NV ++
Sbjct: 29 KCTNLNQVKQLHAQILKSNLHVDLFVVPKLISAFSLCRQMLLATNAFNQVQYPNVHLYNT 88
Query: 362 LFSGYV-KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
+ + +Q +A + + ++G D LL C L + +HA I +
Sbjct: 89 MIRAHSHNSQPSQAFATFFA--MQRDGHYADNFTFPFLLKVCTGNVWLPVIESVHAQIEK 146
Query: 421 MGVQMDKKLISTLVDMYSKCGN--MTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKA 477
G D + ++L+D YSKCG+ ++ A+ +F + RD+V +N MI+ A G E+A
Sbjct: 147 FGFMSDVFVPNSLIDSYSKCGSCGISAAKKLFVSMGARRDVVSWNSMISGLAKGGLYEEA 206
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID 537
+F+EM EK D +++ +L + G ++ K F+ M +S ++ M+
Sbjct: 207 RKVFDEMPEK----DGISWNTMLDGYVKVGKMDDAFKLFDEMPERNVVS-----WSTMVL 257
Query: 538 LYGRANQLEKAIEFMKSIPTE 558
Y +A +E A +P +
Sbjct: 258 GYCKAGDMEMARMLFDKMPVK 278
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 192/642 (29%), Positives = 328/642 (51%), Gaps = 49/642 (7%)
Query: 29 NQLIHIYSKHNL-LRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDL 87
N L++ H L LR + LFD MP + F ++T + AC ++ S PH+
Sbjct: 40 NSLVNCLEPHPLHLRYALHLFDRMPP-STFLFDTALRACSRA----------GSDPHRPF 88
Query: 88 VTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQL 147
+ + M G D + + R +L LC L
Sbjct: 89 LLFRRM-----RRAGVRPDGFTFHFLFKCSSSSSR------PHSLLLCT---------ML 128
Query: 148 HAFMVKTS-NDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREG 206
HA ++T A+ F +SLI MY + +A R F+ E+++ K+A+ G
Sbjct: 129 HAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFD----EIHV--KDAVAWTMLISG 182
Query: 207 EMEMAL----KTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTF 262
+M + + Q + D +SW +LI+ Y + A E + F M +G+ +E T
Sbjct: 183 LAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTV 242
Query: 263 ASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESML--LLK 320
+ LSAC L++++ + +H V + G+ ++ + ++D+Y KC + +A+ + L +
Sbjct: 243 IAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGR 302
Query: 321 GVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA-QNCEALFDLL 379
G R S +++I GY G+++ AR FD + ++++ + ++ +GY+ + Q EAL +
Sbjct: 303 GPRPQ-SWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFM 361
Query: 380 SEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
S + + + D +V LL ACA AL G+ +HA I + V+ D L + L+DMY K
Sbjct: 362 S--MRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMK 419
Query: 440 CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
CG + A I+FQ +RD+ + MIA A +G + A+ F +M G +P++V+++A+
Sbjct: 420 CGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAV 479
Query: 500 LSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE 559
L+A H + G YF+ M Y I P+ +HY CMIDL GR+ L++A++ +K++P +
Sbjct: 480 LTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQP 539
Query: 560 DAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRK 619
+AVI S L+ CR++++ +LA A E LL+LE + YVQL N+Y W +IR
Sbjct: 540 NAVIWASILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQWENASKIRM 599
Query: 620 QMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
M + + AG S + V ++H F V D SHP+ I ++L
Sbjct: 600 LMEERQVKKTAGYSSITVAGQVHKFVVSDKSHPRILEIIAML 641
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 180/345 (52%), Gaps = 8/345 (2%)
Query: 25 TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPH 84
+N LIH+Y + L ++R+ FDE+ ++ +W +IS K L + L +P
Sbjct: 142 PFVSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPV 201
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
+D++++ S++ Y A +A+ F M S I DE TV + L+ C KL ++ G
Sbjct: 202 RDVISWTSLIAAYSRANRAR-EAVGCFKTMLS--HGIAPDEVTVIAVLSACAKLKDLELG 258
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
R LH + + S V +LIDMY+KC + A +VF+ S NA++ C+
Sbjct: 259 RSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCK 318
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFAS 264
G +++A ++ + + E+ D +++N++++GY+ +G E L LF+ M + +R + T +
Sbjct: 319 HGHVDVA-RSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVN 377
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
L+AC L ++ + +H+ + + + ++ ++ + ++D+Y KC ++ A + G R+
Sbjct: 378 LLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRD 437
Query: 325 SFSISSMIVGYSLQGNMEEARRHFDSLT----EKNVVVWTALFSG 365
+ ++MI G + G + A HF + + N V + A+ +
Sbjct: 438 VHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTA 482
>gi|255551961|ref|XP_002517025.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543660|gb|EEF45188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 640
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 188/667 (28%), Positives = 325/667 (48%), Gaps = 46/667 (6%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
RSL + H+ I + + +T N+L+ +YSK + + KLFDE
Sbjct: 14 RSLKTLTTIHAHL-LISGSIASSDLTLNKLLRLYSKFGAVSYAHKLFDE----------- 61
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+P + + +++ G+ YE +A FI+M E+I
Sbjct: 62 --------------------TPEPNSFLWTALIHGFTENNQYE-NAFAFFIKMHR--ENI 98
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
FT+ S L +L + G ++ V+ + + +I+++ +C A +
Sbjct: 99 VPLNFTIASVLKAVSRLGRIKDGDLVYGLAVRCGYEFDLVVKNVMIELFMRCGEMGSARQ 158
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F+ EE + +S N+M+ G +++A K F R E N +SW ++I GYV+ GD
Sbjct: 159 MFDE-MEERDAVSWNSMITGYGNNGRVDIARKLFDRMEERN-VISWTSMIQGYVKAGDLL 216
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E LF RM E + ++ +SA + N+ A+ + + + + + + SG
Sbjct: 217 EARVLFERMPEKDLA----SWKVMVSAYMSVGNLVAARNLFELMPIHDVGTWNLMISGC- 271
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
CK M+ A+ RN S +I GY G+++ AR FD + EKN+V W+
Sbjct: 272 ---CKAGEMDAAKEFFDRMQERNVASWVMIIDGYIKVGDVDAARSVFDQMPEKNLVAWST 328
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+ GY K + + L F ++G+ D + ++ AC+ + + +
Sbjct: 329 MIGGYAKTGHPYSSLKLYKTF-KEQGIKPDETFALGIISACSQLGVPDTAESVICDFVGP 387
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
+ + +++++L+DMY+KCGN+ A +F+ ++DL Y+ +I +A+HG E AI LF
Sbjct: 388 SLFPNLQVVTSLIDMYAKCGNIERAVQVFEMVDQKDLHCYSTVITAFANHGLSEDAISLF 447
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGR 541
EM + IKPD V F+ +L+A H G V G + F M +Y I P HYACM+D+ GR
Sbjct: 448 SEMQKANIKPDGVAFLGVLTACNHGGLVGEGRRLFRQMIDEYGIQPSEKHYACMVDILGR 507
Query: 542 ANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQL 601
A LE+A + S+P +A + G+ L+ CR++ N +LA A +L ++E NN YV L
Sbjct: 508 AGCLEEAHSLICSMPVAPNATVWGALLSACRVHLNVQLAEAAATELFQIEPNNSGNYVLL 567
Query: 602 ANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
N+YA G W + ++R +R + + G SW+ + IH F +GD SH + I+ +L
Sbjct: 568 FNIYADAGQWDDFSKVRAMIRENRVRKNRGSSWIELGSVIHEFVMGDKSHFDSERIFFML 627
Query: 662 AIFTGEL 668
+ ++
Sbjct: 628 ELLCKDM 634
>gi|218184996|gb|EEC67423.1| hypothetical protein OsI_34621 [Oryza sativa Indica Group]
Length = 799
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 190/699 (27%), Positives = 323/699 (46%), Gaps = 148/699 (21%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A+K GL + T + L+ +Y K L ++ F MPERN W
Sbjct: 172 HALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERN---W------------- 215
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
V++ S + G + E Y L+LFIEMQ + + + + S
Sbjct: 216 ---------------VSWGSAIAGCVQNEQY-VRGLELFIEMQRLG--LGVSQPSYASAF 257
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV-- 190
C + + GRQLHA +K + ++++D+Y+K +A R F G
Sbjct: 258 RSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVE 317
Query: 191 ------------------NLISKNAMVAACCR-----EGEME--MALKT----------- 214
+++S + + +AC G+ +A+K+
Sbjct: 318 TSNAMMVGLFMIRSSIRFDVVSLSGVFSACAETKGYFPGQQVHCLAIKSVLDLYGKCKAL 377
Query: 215 -----FWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
++ + D+VSWN +I+ QNG ++ + F M
Sbjct: 378 MEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEM------------------- 418
Query: 270 CGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSIS 329
L + FV+S +VD+YCKC
Sbjct: 419 --------------------LRFDAFVASTVVDMYCKC---------------------- 436
Query: 330 SMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVV 389
G ++EA++ D + + VV W A+ SG+ + EA SE + G+
Sbjct: 437 ---------GIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEAAQKFFSEMLDM-GLK 486
Query: 390 TDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEII 449
D +L CA A + GK+IH I++ + D+ + STLVDMY+KCG+M + ++
Sbjct: 487 PDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLV 546
Query: 450 FQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSV 509
F+ +RD V +N MI YA HG +A+ +FE M ++ + P+ TFVA+L A H G
Sbjct: 547 FEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLF 606
Query: 510 EMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLN 569
+ G +YF+ MT YK+ P+ +H+ACM+D+ GR+ ++A++F+ S+P + DAVI + L+
Sbjct: 607 DDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 666
Query: 570 VCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRF 629
+C++ ++ E+A A +L L+ ++ + Y+ L+NVYA G WA++ R R+ ++ + +
Sbjct: 667 ICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKE 726
Query: 630 AGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
GCSW+ + E+H F VGD +HP++ +Y +L GE+
Sbjct: 727 PGCSWIEAQSEMHGFLVGDKAHPRSGELYEMLNDLIGEM 765
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 143/544 (26%), Positives = 252/544 (46%), Gaps = 54/544 (9%)
Query: 17 IKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQAR 76
+ +G T +N L+ +Y++ +R++FD MP R+ SWNT+++A + D+ A
Sbjct: 44 VVSGFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAV 103
Query: 77 SLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCV 136
+LFD P D+V++N+++ GY G +++ LF+EM A + D T L C
Sbjct: 104 ALFDGMPDPDVVSWNALVSGYCQ-RGMFQESVDLFVEM--ARRGVSPDRTTFAVLLKSCS 160
Query: 137 KLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKN 196
L + G Q+HA VKT + S+L+DMY KCR ++A
Sbjct: 161 ALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDA----------------- 203
Query: 197 AMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVR 256
L F+ PE N VSW + I+G VQN GL+LF+ M G+
Sbjct: 204 ---------------LCFFYGMPERN-WVSWGSAIAGCVQNEQYVRGLELFIEMQRLGLG 247
Query: 257 WNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESM 316
++ ++ASA +C + + +++H+ +KN S+ V + IVDVY K ++ A
Sbjct: 248 VSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRA 307
Query: 317 LLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ--NCEA 374
+ ++M+VG M + FD ++ V A GY Q +C A
Sbjct: 308 FFGLPNHTVETSNAMMVGLF----MIRSSIRFDVVSLSGVFSACAETKGYFPGQQVHCLA 363
Query: 375 LFDLLSEFVTKEGVVTDALILVIL-----LGACALQAALHPGKEIHAYILRMG--VQMDK 427
+ +L + + ++ LI + + A+ AAL IL ++ D
Sbjct: 364 IKSVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFDA 423
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
+ ST+VDMY KCG + A+ + + +V +N +++ ++ + E A F EML+
Sbjct: 424 FVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEAAQKFFSEMLDM 483
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY--ACMIDLYGRANQL 545
G+KPD TF +L + ++E+G++ + + D Y + ++D+Y + +
Sbjct: 484 GLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLD---DEYISSTLVDMYAKCGDM 540
Query: 546 EKAI 549
++
Sbjct: 541 PDSL 544
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 186/409 (45%), Gaps = 74/409 (18%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
M+ L L + + A ++ ++ + T + +H ++ N R +
Sbjct: 241 MQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVV-----------GT 289
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
I+ K++ L AR F P+ + T N+M+ G LF+ S
Sbjct: 290 AIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVG-------------LFMIRSS---- 332
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
IR D +++ + C + G+Q+H +K S++D+Y KC+ EA
Sbjct: 333 IRFDVVSLSGVFSACAETKGYFPGQQVHCLAIK-----------SVLDLYGKCKALMEAY 381
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQ---------------------- 218
+F+G ++ + +S NA++AA + G + + F
Sbjct: 382 LIFQGMKQK-DSVSWNAIIAALEQNGHYDDTILHFNEMLRFDAFVASTVVDMYCKCGIID 440
Query: 219 --PELND------AVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACC 270
+L+D VSWN ++SG+ N ++E K F M + G++ + TFA+ L C
Sbjct: 441 EAQKLHDRIGGQQVVSWNAILSGFSLNKESEAAQKFFSEMLDMGLKPDHFTFATVLDTCA 500
Query: 271 GLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGV--RNSFSI 328
L ++ K+IH ++K ++ + ++SS +VD+Y KC +M +S+L+ + V R+ S
Sbjct: 501 NLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDM--PDSLLVFEKVEKRDFVSW 558
Query: 329 SSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFD 377
++MI GY+L G EA R F+ + ++NVV A F ++A + LFD
Sbjct: 559 NAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFD 607
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 127/522 (24%), Positives = 215/522 (41%), Gaps = 81/522 (15%)
Query: 151 MVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEM 210
MV + + F + L+ MY++C A RVF+ + +S N M+ A G++
Sbjct: 43 MVVSGFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRR-DTVSWNTMLTAYSHAGDIST 101
Query: 211 ALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACC 270
A+ F P+ D VSWN L+SGY Q G +E + LFV M GV + TFA L +C
Sbjct: 102 AVALFDGMPD-PDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCS 160
Query: 271 GLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISS 330
L + ++H+ +K GL + S +VD+Y KC +++ A RN S S
Sbjct: 161 ALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGS 220
Query: 331 MIVG--------YSLQGNMEEAR--------------------------RHFDSLTEKNV 356
I G L+ +E R R + KN
Sbjct: 221 AIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNK 280
Query: 357 -----VVWTALFSGYVKAQNC----EALFDLLSE------------FVTKEGVVTDALIL 395
VV TA+ Y KA + A F L + F+ + + D + L
Sbjct: 281 FSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLFMIRSSIRFDVVSL 340
Query: 396 VILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIE 455
+ ACA PG+++H I +++D+Y KC + A +IFQ +
Sbjct: 341 SGVFSACAETKGYFPGQQVHCLA-----------IKSVLDLYGKCKALMEAYLIFQGMKQ 389
Query: 456 RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKY 515
+D V +N +IA +GH + IL F EML + DA ++ + CG ++ +K
Sbjct: 390 KDSVSWNAIIAALEQNGHYDDTILHFNEML----RFDAFVASTVVDMYCKCGIIDEAQKL 445
Query: 516 FNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF---MKSIPTEEDAVILGSFLNVCR 572
+ + +S + ++ + + E A +F M + + D + L+ C
Sbjct: 446 HDRIGGQQVVS-----WNAILSGFSLNKESEAAQKFFSEMLDMGLKPDHFTFATVLDTCA 500
Query: 573 LNRNAELAGEAEEKLLRLEG-NNKARYVQLANVYAAEGNWAE 613
EL + ++++ E +++ L ++YA G+ +
Sbjct: 501 NLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPD 542
>gi|357481223|ref|XP_003610897.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512232|gb|AES93855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 774
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 196/633 (30%), Positives = 311/633 (49%), Gaps = 75/633 (11%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
+ ++F N +++ K L AR LFD P ++ V++ ++ GY G + LF
Sbjct: 112 QNDIFLTNNLLNMYCKCGHLDYARYLFDQMPRRNFVSWTVLVSGYAQF-GLIRECFALFS 170
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
M + R +EF S L C + +V +G Q+HA +K S D S + ++LI MYSK
Sbjct: 171 GMLAC---FRPNEFAFASVLCACEEQ-DVKYGLQVHAAALKMSLDFSVYVANALITMYSK 226
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C F G ++ + M K+ E + +SWN++IS
Sbjct: 227 CS------GGFGGSCDQTT--------------DDAWMVFKSM----EYRNLISWNSMIS 262
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC--C--------GLRNVKCAKEIH 282
G+ G ++ + LF M NG+R+N T LS+ C ++K ++H
Sbjct: 263 GFQFRGLGDKAIGLFAHMYCNGIRFNSTTLLGVLSSLNHCMSTSDDINNTHHLKNCFQLH 322
Query: 283 SWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNME 342
+K+GLIS V + +V Y L G++
Sbjct: 323 CLTVKSGLISEVEVVTALVKSYA------------------------------DLGGHIS 352
Query: 343 EARRHF-DSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGA 401
+ + F D+ E ++V WTA+ S + + ++ E F L + + +E V D I L A
Sbjct: 353 DCFKLFLDTSGEHDIVSWTAIISVFAE-RDPEQAFLLFCQ-LHRENFVLDRHTFSIALKA 410
Query: 402 CALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLY 461
CA E+H+ +++ G D + + L+ Y + G++ +E +F DLV +
Sbjct: 411 CAYFVTEKNATEVHSQVMKQGFHNDTVVSNALIHAYGRSGSLALSEQVFTEMGCHDLVSW 470
Query: 462 NVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTA 521
N M+ YA HG + A+ LF++M + PD+ TFVA+L+A H G VE G + FNSMT
Sbjct: 471 NSMLKSYAIHGRAKDALDLFKQM---DVHPDSATFVALLAACSHAGLVEEGTQIFNSMTE 527
Query: 522 DYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAG 581
+ I+P DHY+CM+DLYGRA ++ +A E ++ +P + D+VI S L CR + A+LA
Sbjct: 528 SHGIAPHLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGEADLAK 587
Query: 582 EAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEI 641
A +K L+ N Y+Q++N+Y++ G++ E G IRK+MR K + G SWV V ++
Sbjct: 588 LAADKFKVLDPKNSLAYIQMSNIYSSGGSFIEAGLIRKEMRDSKVRKRPGLSWVEVGKQV 647
Query: 642 HIFTVGDVSHPKTNAIYSVLAIFTGELYEIAGA 674
H FT G HPK AI S L G+L E+ A
Sbjct: 648 HEFTSGGQHHPKRQAILSRLETLIGQLKEMGYA 680
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 397 ILLGACALQAALHPGKEIHAYIL--RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFI 454
L ACA + + G +H YIL +Q D L + L++MY KCG++ YA +F
Sbjct: 83 FLFHACAQKKYIKQGMALHHYILNKHPKIQNDIFLTNNLLNMYCKCGHLDYARYLFDQMP 142
Query: 455 ERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
R+ V + V+++ YA G + LF ML +P+ F ++L A
Sbjct: 143 RRNFVSWTVLVSGYAQFGLIRECFALFSGML-ACFRPNEFAFASVLCA 189
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 82/206 (39%), Gaps = 38/206 (18%)
Query: 7 KEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISAC 66
K A H Q +K G T+ +N LIH Y + L S ++F EM C
Sbjct: 418 KNATEVHSQVMKQGFHNDTVVSNALIHAYGRSGSLALSEQVFTEM-------------GC 464
Query: 67 IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEF 126
HDL V++NSML Y G DAL LF +M + D
Sbjct: 465 ---HDL---------------VSWNSMLKSYA-IHGRAKDALDLFKQMD-----VHPDSA 500
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGF-AVSSLIDMYSKCRCYEEACRVFEG 185
T + L C V G Q+ M ++ A S ++D+Y + EA +
Sbjct: 501 TFVALLAACSHAGLVEEGTQIFNSMTESHGIAPHLDHYSCMVDLYGRAGKIFEAEELIRK 560
Query: 186 CTEEVNLISKNAMVAACCREGEMEMA 211
+ + + ++++ +C + GE ++A
Sbjct: 561 MPMKPDSVIWSSLLGSCRKHGEADLA 586
>gi|242048970|ref|XP_002462229.1| hypothetical protein SORBIDRAFT_02g022150 [Sorghum bicolor]
gi|241925606|gb|EER98750.1| hypothetical protein SORBIDRAFT_02g022150 [Sorghum bicolor]
Length = 686
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 192/622 (30%), Positives = 308/622 (49%), Gaps = 63/622 (10%)
Query: 52 PERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLF 111
P+ V N I+A +++ + A LF + + TYN+ML GY A G AL F
Sbjct: 31 PDAEVIRRNKAITAHMRAGRVPDAERLFAAMSRRSTSTYNAMLGGYA-ANGRLTLALSFF 89
Query: 112 IEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLID--M 169
+ R D F+ + L+ ++ R L M + + +SS + +
Sbjct: 90 RSIP------RPDSFSYNTLLHALGVSSSLADARALFDEMPVKDSVSYNVMISSHANHGL 143
Query: 170 YSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNT 229
S R Y + E + +S N M+AA R G ++ A F + E DA+SWN
Sbjct: 144 VSLARHYFD-------LAPEKDAVSWNGMLAAYIRNGRIQEARDLFDSRTEW-DAISWNA 195
Query: 230 LISGYVQNGDAEEGLKLFVRMGENGV-RWNE----HTFASALSACCGLRNVKCAKEIHSW 284
L++GYVQ EE K+F RM + V WN H ++ L +V +++ +W
Sbjct: 196 LMAGYVQCSQIEEAQKMFNRMPQRDVVSWNTMVSGHARRGDMAEARRLFDVAPIRDVFTW 255
Query: 285 VLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEA 344
+ +V Y + + A+ + +N+ S ++M+ Y + MEEA
Sbjct: 256 -------------TAVVSGYAQNGMLEEAKRVFDAMPEKNAVSWNAMMAAYVQRRMMEEA 302
Query: 345 RRHFDSLTEKNVVVWTALFSGYVKA---QNCEALFDLLSEFVTKEGVVTDALILVILLGA 401
+ FD++ +NV W + +GY +A A+FD++ + K+ V A++ G
Sbjct: 303 KELFDAMPCRNVASWNTMLTGYAQAGMLDEARAIFDMMPQ---KDAVSWAAMLAAYSQGG 359
Query: 402 CALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLY 461
+ + L++ +M + MY KCGNM A F+ ERD+V +
Sbjct: 360 FSEE------------TLQLFKEMGR------CAMYFKCGNMEEAHSAFEEMEERDIVSW 401
Query: 462 NVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTA 521
N MIA YA HG ++A+ +F+ M + KPD +T V +L+A H G VE G YF SM
Sbjct: 402 NTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHR 461
Query: 522 DYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAG 581
D+ ++ + +HY CMIDL GRA +L++A+ MK +P E D+ + G+ L R++RN+EL
Sbjct: 462 DFGVTAKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIHRNSELGR 521
Query: 582 EAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEH 639
A EK+ LE N YV L+N+YA+ G W ++ ++R M RG+K + G SW+ V++
Sbjct: 522 NAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDKMRLMMHERGVK--KVPGFSWIEVQN 579
Query: 640 EIHIFTVGDVSHPKTNAIYSVL 661
++H F+VGD HP+ IY L
Sbjct: 580 KVHTFSVGDSVHPEREDIYGFL 601
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 126/506 (24%), Positives = 227/506 (44%), Gaps = 56/506 (11%)
Query: 24 TTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP 83
+T T N ++ Y+ + L + F +P + FS+NT++ A S L AR+LFD P
Sbjct: 65 STSTYNAMLGGYAANGRLTLALSFFRSIPRPDSFSYNTLLHALGVSSSLADARALFDEMP 124
Query: 84 HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGF 143
KD V+YN M+ + N G + A F D D + L ++ +
Sbjct: 125 VKDSVSYNVMISSHAN-HGLVSLARHYF------DLAPEKDAVSWNGMLAAYIRNGRIQE 177
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
R L F +T DA + ++L+ Y +C EEA ++F + +++S N MV+
Sbjct: 178 ARDL--FDSRTEWDAISW--NALMAGYVQCSQIEEAQKMFNRMPQR-DVVSWNTMVSGHA 232
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE-NGVRWNEHTF 262
R G+M A + F P + D +W ++SGY QNG EE ++F M E N V WN
Sbjct: 233 RRGDMAEARRLFDVAP-IRDVFTWTAVVSGYAQNGMLEEAKRVFDAMPEKNAVSWN---- 287
Query: 263 ASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGV 322
+ ++A R ++ AKE+ + + S + +G Y + ++ A ++ +
Sbjct: 288 -AMMAAYVQRRMMEEAKELFDAMPCRNVASWNTMLTG----YAQAGMLDEARAIFDMMPQ 342
Query: 323 RNSFSISSMIVGYS--------LQ--------------GNMEEARRHFDSLTEKNVVVWT 360
+++ S ++M+ YS LQ GNMEEA F+ + E+++V W
Sbjct: 343 KDAVSWAAMLAAYSQGGFSEETLQLFKEMGRCAMYFKCGNMEEAHSAFEEMEERDIVSWN 402
Query: 361 ALFSGYVK---AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
+ +GY + + +FD + + TK D + LV +L AC+ + G
Sbjct: 403 TMIAGYARHGFGKEALEVFDTMRKTSTK----PDDITLVGVLAACSHSGLVEKGISYFYS 458
Query: 418 ILR-MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEE 475
+ R GV + + ++D+ + G + A + ++ E D ++ ++ H + E
Sbjct: 459 MHRDFGVTAKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIHRNSE 518
Query: 476 KAILLFEEMLEKGIKPDAVTFVAILS 501
E++ E ++P+ +LS
Sbjct: 519 LGRNAAEKIFE--LEPENAGMYVLLS 542
>gi|48475086|gb|AAT44155.1| hypothetical protein, contains pentrtricopeptide (PPR) repeat
[Oryza sativa Japonica Group]
gi|125568883|gb|EAZ10398.1| hypothetical protein OsJ_00231 [Oryza sativa Japonica Group]
Length = 836
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 194/620 (31%), Positives = 309/620 (49%), Gaps = 49/620 (7%)
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
KD V +N + AE ++ +A+ +F EMQ+ + D +T L+ C + + G
Sbjct: 119 KDAVLWNKHVAMLAEAEEWD-EAIAVFREMQA--RGVPADGYTCARVLHACGRAGALREG 175
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
R +HA+ +K + DA L MY++ A RV + +++ NA+VA C R
Sbjct: 176 RAVHAYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAG-SVVPWNAVVACCAR 234
Query: 205 EG----EMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEH 260
G +E+A + PE N A +WNT++SG ++G E L + M + G+R +
Sbjct: 235 LGLVDDALELAARMSRSGPEPNVA-TWNTVLSGCSRHGRDREALGVVASMLKQGLRPDAT 293
Query: 261 TFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESML--- 317
T +S L + ++ EIH + L+N L + + + +VD+Y KC ++ A+ +L
Sbjct: 294 TVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDAL 353
Query: 318 ----------LLKGVRNS--FSIS--------------------SMIVGYSLQGNMEEA- 344
L+ G N+ F I+ +I GYS+ G +A
Sbjct: 354 EHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAV 413
Query: 345 ---RRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGA 401
R+ + NVV WT+L SG E F E + K+GV + + +LL A
Sbjct: 414 LLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHE-MQKDGVQPSLVTMSVLLRA 472
Query: 402 CALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLY 461
CA A GKE+H + LR D + + L+DMYSK G++ A++IF++ +++LVL
Sbjct: 473 CAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFESIQQKNLVLC 532
Query: 462 NVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTA 521
N M+ A HG +AI LF +M G+KPD++TF A+L+A R G V G +YF+SM
Sbjct: 533 NAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTACRSMGLVTEGWEYFDSMET 592
Query: 522 DYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAG 581
Y + P T++YACM+DL R L++A++F++ P + A G+ L C ++ N LA
Sbjct: 593 KYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWGALLTGCSIHGNLALAE 652
Query: 582 EAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEI 641
A L LE N A Y+ + N+Y E + E ++ M+ + G SW+ +E I
Sbjct: 653 VAARNLFILEPYNSANYLLMMNLYEYERMYDEAESLKYAMKARGVDSRPGWSWIQIEQGI 712
Query: 642 HIFTVGDVSHPKTNAIYSVL 661
H+F V HP+T IY L
Sbjct: 713 HVFEVDGKPHPETAEIYEEL 732
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 119/502 (23%), Positives = 218/502 (43%), Gaps = 85/502 (16%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R+ L+E H A+K L + L +Y+++ + + ++ D M +V WN
Sbjct: 168 RAGALREGRAVHAYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNA 227
Query: 62 IISACIK----SHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSA 117
+++ C + L+ A + S P ++ T+N++L G + G + +AL + M
Sbjct: 228 VVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSG-CSRHGRDREALGVVASMLK- 285
Query: 118 DEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYE 177
+ +R D TV+S L + G ++H F ++ + + ++L+DMY+KC +
Sbjct: 286 -QGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLD 344
Query: 178 EACRVFEGCTEEVNLISKNAMVAACCREGEMEMALK--------------TFW------- 216
A +V + E NL + N++VA G ++AL+ T W
Sbjct: 345 CAQKVLDA-LEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLITGY 403
Query: 217 -------------RQPE----LNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNE 259
RQ + + VSW +LISG NG+ E+ M ++GV+ +
Sbjct: 404 SMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSL 463
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLL 319
T + L AC GL K KE+H + L+ + VS+ ++D+Y K
Sbjct: 464 VTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSK------------- 510
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY-VKAQNCEALFDL 378
G++ A+ F+S+ +KN+V+ A+ +G V Q EA+ +L
Sbjct: 511 ------------------GGSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAI-EL 551
Query: 379 LSEFVTKEGVVTDALILVILLGACALQAALHPGKE-IHAYILRMGVQMDKKLISTLVDMY 437
+ + G+ D++ LL AC + G E + + GV+ + + +VD+
Sbjct: 552 FHD-MWNSGLKPDSITFTALLTACRSMGLVTEGWEYFDSMETKYGVKPTTENYACMVDLL 610
Query: 438 SKCGNMTYAEIIFQNFIERDLV 459
++CG + A +FIER +
Sbjct: 611 ARCGYLDEA----MDFIERSPI 628
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 12/148 (8%)
Query: 378 LLSEFVTKEGVVT-DALILVILLGACA--------LQAALHPGKEIHAYILRMGVQMDKK 428
LL+ + GV A +LV LL CA + A ++H+ +R G+ D +
Sbjct: 29 LLNAAALRTGVPPYSAGVLVSLLRDCADLHGDDTDHRVARRLAPQLHSLAVRTGLSRDPR 88
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIE---RDLVLYNVMIACYAHHGHEEKAILLFEEML 485
+ LVD+ ++ G + E +D VL+N +A A ++AI +F EM
Sbjct: 89 VTCALVDLLARLGRGPSCARLLHEAAEDGAKDAVLWNKHVAMLAEAEEWDEAIAVFREMQ 148
Query: 486 EKGIKPDAVTFVAILSAFRHCGSVEMGE 513
+G+ D T +L A G++ G
Sbjct: 149 ARGVPADGYTCARVLHACGRAGALREGR 176
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 91/206 (44%), Gaps = 11/206 (5%)
Query: 12 CHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACI---- 67
CH + K G+ + +T + L+ + L ++ ++L R + + ++S +
Sbjct: 451 CH-EMQKDGVQPSLVTMSVLLRACAGLALQKKGKELHC-FALRRAYDCDMVVSTALIDMY 508
Query: 68 -KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEF 126
K L A+ +F+S K+LV N+ML G + G +A++LF +M ++ ++ D
Sbjct: 509 SKGGSLVSAKVIFESIQQKNLVLCNAMLTG-LAVHGQGREAIELFHDMWNSG--LKPDSI 565
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFM-VKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
T T+ L C + V G + M K + + ++D+ ++C +EA E
Sbjct: 566 TFTALLTACRSMGLVTEGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIER 625
Query: 186 CTEEVNLISKNAMVAACCREGEMEMA 211
+ A++ C G + +A
Sbjct: 626 SPIDPGASHWGALLTGCSIHGNLALA 651
>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 882
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 180/608 (29%), Positives = 299/608 (49%), Gaps = 79/608 (12%)
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+++ +K AR +FD +D V+YN+M+CGY+ E E +++++F+E +
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVE-ESVRMFLENL---DQF 303
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS-----LIDMYSKCRCY 176
+ D TV+S L C L ++ + ++ +M+K +GF + S LID+Y+KC
Sbjct: 304 KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLK-----AGFVLESTVRNILIDVYAKC--- 355
Query: 177 EEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQ 236
G+M A F E D VSWN++ISGY+Q
Sbjct: 356 -----------------------------GDMITARDVF-NSMECKDTVSWNSIISGYIQ 385
Query: 237 NGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFV 296
+GD E +KLF M + + T+ +S L ++K K +HS +K+G+ + V
Sbjct: 386 SGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSV 445
Query: 297 SSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNV 356
S+ ++D+Y KC G + ++ + F S+ +
Sbjct: 446 SNALIDMYAKC-------------------------------GEVGDSLKIFSSMGTGDT 474
Query: 357 VVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHA 416
V W + S V+ + + ++ + K VV D ++ L CA AA GKEIH
Sbjct: 475 VTWNTVISACVRFGDFATGLQVTTQ-MRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHC 533
Query: 417 YILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
+LR G + + ++ + L++MYSKCG + + +F+ RD+V + MI Y +G EK
Sbjct: 534 CLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEK 593
Query: 477 AILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMI 536
A+ F +M + GI PD+V F+AI+ A H G V+ G F M YKI P +HYAC++
Sbjct: 594 ALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVV 653
Query: 537 DLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKA 596
DL R+ ++ KA EF++++P + DA I S L CR + + E A +++ L ++
Sbjct: 654 DLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPG 713
Query: 597 RYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNA 656
+ +N YAA W ++ IRK ++ + G SW+ V +H+F+ GD S P++ A
Sbjct: 714 YSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEA 773
Query: 657 IYSVLAIF 664
IY L I
Sbjct: 774 IYKSLEIL 781
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 134/570 (23%), Positives = 241/570 (42%), Gaps = 103/570 (18%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEM-PERNVFSWNT 61
S NL E H I GL + + +LI YS S +F + P +NV+ WN+
Sbjct: 17 SSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNS 76
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
II A K+ G +AL+ + +++ + +
Sbjct: 77 IIRAFSKN--------------------------------GLFPEALEFYGKLR--ESKV 102
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
D++T S + C L + G ++ ++ ++ F ++L+DMYS+ A +
Sbjct: 103 SPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQ 162
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
VF+ EM ++ D VSWN+LISGY +G E
Sbjct: 163 VFD------------------------EMPVR---------DLVSWNSLISGYSSHGYYE 189
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E L+++ + + + + T +S L A L VK + +H + LK+G+ S V++G+V
Sbjct: 190 EALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLV 249
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
+Y K A + VR+S S ++MI GY +EE+ R F
Sbjct: 250 AMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF------------- 296
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+ L +F D L + +L AC L K I+ Y+L+
Sbjct: 297 --------------LENLDQF------KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKA 336
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
G ++ + + L+D+Y+KCG+M A +F + +D V +N +I+ Y G +A+ LF
Sbjct: 337 GFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLF 396
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGR 541
+ M+ + D +T++ ++S ++ G K +S I + +ID+Y +
Sbjct: 397 KMMMIMEEQADHITYLMLISVSTRLADLKFG-KGLHSNGIKSGICIDLSVSNALIDMYAK 455
Query: 542 ANQLEKAIEFMKSIPTEEDAVILGSFLNVC 571
++ +++ S+ T D V + ++ C
Sbjct: 456 CGEVGDSLKIFSSMGT-GDTVTWNTVISAC 484
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 75/162 (46%), Gaps = 6/162 (3%)
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIE-RDLV 459
A + + L+ + IHA ++ +G+ L+D YS + +F+ +++
Sbjct: 13 ALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVY 72
Query: 460 LYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSM 519
L+N +I ++ +G +A+ + ++ E + PD TF +++ A EMG+ + +
Sbjct: 73 LWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQI 132
Query: 520 TADYKISPETDHYA--CMIDLYGRANQLEKAIEFMKSIPTEE 559
+ E+D + ++D+Y R L +A + +P +
Sbjct: 133 ---LDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRD 171
>gi|215768832|dbj|BAH01061.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 842
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 194/620 (31%), Positives = 309/620 (49%), Gaps = 49/620 (7%)
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
KD V +N + AE ++ +A+ +F EMQ+ + D +T L+ C + + G
Sbjct: 119 KDAVLWNKHVAMLAEAEEWD-EAIAVFREMQA--RGVPADGYTCARVLHACGRAGALREG 175
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
R +HA+ +K + DA L MY++ A RV + +++ NA+VA C R
Sbjct: 176 RAVHAYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAG-SVVPWNAVVACCAR 234
Query: 205 EG----EMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEH 260
G +E+A + PE N A +WNT++SG ++G E L + M + G+R +
Sbjct: 235 LGLVDDALELAARMSRSGPEPNVA-TWNTVLSGCSRHGRDREALGVVASMLKQGLRPDAT 293
Query: 261 TFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESML--- 317
T +S L + ++ EIH + L+N L + + + +VD+Y KC ++ A+ +L
Sbjct: 294 TVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDAL 353
Query: 318 ----------LLKGVRNS--FSIS--------------------SMIVGYSLQGNMEEA- 344
L+ G N+ F I+ +I GYS+ G +A
Sbjct: 354 EHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAV 413
Query: 345 ---RRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGA 401
R+ + NVV WT+L SG E F E + K+GV + + +LL A
Sbjct: 414 LLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHE-MQKDGVQPSLVTMSVLLRA 472
Query: 402 CALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLY 461
CA A GKE+H + LR D + + L+DMYSK G++ A++IF++ +++LVL
Sbjct: 473 CAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFESIQQKNLVLC 532
Query: 462 NVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTA 521
N M+ A HG +AI LF +M G+KPD++TF A+L+A R G V G +YF+SM
Sbjct: 533 NAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTACRSMGLVTEGWEYFDSMET 592
Query: 522 DYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAG 581
Y + P T++YACM+DL R L++A++F++ P + A G+ L C ++ N LA
Sbjct: 593 KYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWGALLTGCSIHGNLALAE 652
Query: 582 EAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEI 641
A L LE N A Y+ + N+Y E + E ++ M+ + G SW+ +E I
Sbjct: 653 VAARNLFILEPYNSANYLLMMNLYEYERMYDEAESLKYAMKARGVDSRPGWSWIQIEQGI 712
Query: 642 HIFTVGDVSHPKTNAIYSVL 661
H+F V HP+T IY L
Sbjct: 713 HVFEVDGKPHPETAEIYEEL 732
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 119/502 (23%), Positives = 218/502 (43%), Gaps = 85/502 (16%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R+ L+E H A+K L + L +Y+++ + + ++ D M +V WN
Sbjct: 168 RAGALREGRAVHAYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNA 227
Query: 62 IISACIK----SHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSA 117
+++ C + L+ A + S P ++ T+N++L G + G + +AL + M
Sbjct: 228 VVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSG-CSRHGRDREALGVVASMLK- 285
Query: 118 DEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYE 177
+ +R D TV+S L + G ++H F ++ + + ++L+DMY+KC +
Sbjct: 286 -QGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLD 344
Query: 178 EACRVFEGCTEEVNLISKNAMVAACCREGEMEMALK--------------TFW------- 216
A +V + E NL + N++VA G ++AL+ T W
Sbjct: 345 CAQKVLDA-LEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLITGY 403
Query: 217 -------------RQPE----LNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNE 259
RQ + + VSW +LISG NG+ E+ M ++GV+ +
Sbjct: 404 SMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSL 463
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLL 319
T + L AC GL K KE+H + L+ + VS+ ++D+Y K
Sbjct: 464 VTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSK------------- 510
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY-VKAQNCEALFDL 378
G++ A+ F+S+ +KN+V+ A+ +G V Q EA+ +L
Sbjct: 511 ------------------GGSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAI-EL 551
Query: 379 LSEFVTKEGVVTDALILVILLGACALQAALHPGKE-IHAYILRMGVQMDKKLISTLVDMY 437
+ + G+ D++ LL AC + G E + + GV+ + + +VD+
Sbjct: 552 FHD-MWNSGLKPDSITFTALLTACRSMGLVTEGWEYFDSMETKYGVKPTTENYACMVDLL 610
Query: 438 SKCGNMTYAEIIFQNFIERDLV 459
++CG + A +FIER +
Sbjct: 611 ARCGYLDEA----MDFIERSPI 628
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 12/148 (8%)
Query: 378 LLSEFVTKEGVVT-DALILVILLGACA--------LQAALHPGKEIHAYILRMGVQMDKK 428
LL+ + GV A +LV LL CA + A ++H+ +R G+ D +
Sbjct: 29 LLNAAALRTGVPPYSAGVLVSLLRDCADLHGDDTDHRVARRLAPQLHSLAVRTGLSRDPR 88
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIE---RDLVLYNVMIACYAHHGHEEKAILLFEEML 485
+ LVD+ ++ G + E +D VL+N +A A ++AI +F EM
Sbjct: 89 VTCALVDLLARLGRGPSCARLLHEAAEDGAKDAVLWNKHVAMLAEAEEWDEAIAVFREMQ 148
Query: 486 EKGIKPDAVTFVAILSAFRHCGSVEMGE 513
+G+ D T +L A G++ G
Sbjct: 149 ARGVPADGYTCARVLHACGRAGALREGR 176
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 91/206 (44%), Gaps = 11/206 (5%)
Query: 12 CHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACI---- 67
CH + K G+ + +T + L+ + L ++ ++L R + + ++S +
Sbjct: 451 CH-EMQKDGVQPSLVTMSVLLRACAGLALQKKGKELHC-FALRRAYDCDMVVSTALIDMY 508
Query: 68 -KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEF 126
K L A+ +F+S K+LV N+ML G + G +A++LF +M ++ ++ D
Sbjct: 509 SKGGSLVSAKVIFESIQQKNLVLCNAMLTG-LAVHGQGREAIELFHDMWNSG--LKPDSI 565
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFM-VKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
T T+ L C + V G + M K + + ++D+ ++C +EA E
Sbjct: 566 TFTALLTACRSMGLVTEGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIER 625
Query: 186 CTEEVNLISKNAMVAACCREGEMEMA 211
+ A++ C G + +A
Sbjct: 626 SPIDPGASHWGALLTGCSIHGNLALA 651
>gi|357148182|ref|XP_003574661.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 553
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 165/498 (33%), Positives = 271/498 (54%), Gaps = 15/498 (3%)
Query: 166 LIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAV 225
L ++ R A R+F+ N+IS N++VA C G+++ A F R P N A
Sbjct: 45 LTALWRAGRDLPAARRLFDDMPSR-NVISWNSVVAGCLAHGDLDAASAYFARAPRRNVA- 102
Query: 226 SWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWV 285
SWN +++G V+ G ++ LF M + V ++ + + V A+E+ +
Sbjct: 103 SWNAMLAGLVRLGRMDDAWALFGEMPQRNVV----SYTTMVDGLARRGEVARAREVFDAM 158
Query: 286 LKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGV--RNSFSISSMIVGYSLQGNMEE 343
+ L+S + +G V EN + E+ L + + +N + ++MI GY G++E
Sbjct: 159 PERNLVSWAAMITGYV------ENAMFDEARKLFEAMPDKNVVACTAMITGYCKDGDVES 212
Query: 344 ARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACA 403
ARR FD + K+V+ W A+ +GYV + E L + +EGV D L+ +L AC+
Sbjct: 213 ARRLFDGIPVKDVISWNAMITGYVHNGHGEEAMKL-HIIMFREGVKPDHATLIAILTACS 271
Query: 404 LQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNV 463
A L G+ HA + ++ + L+ MYSKCGN+ +E++F N +D+V +N
Sbjct: 272 ALALLRQGRSTHAVATKTMLESSTSFCNALMTMYSKCGNVGESELVFMNLKIQDIVSWNT 331
Query: 464 MIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADY 523
+IA YA HG +KAI LF EM +G+ P+ +T +++LSA H G V + F+ M++ Y
Sbjct: 332 IIAAYAQHGKYQKAIALFHEMETRGLIPNDITILSMLSACGHVGRVNDSLELFDLMSSKY 391
Query: 524 KISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEA 583
ISP +HYAC++D+ GRA QLEKA ++K +P E + + G+ L + + N +L A
Sbjct: 392 AISPSAEHYACVVDILGRAGQLEKACSYIKKMPFEAERNVWGALLGASKTHGNVQLGELA 451
Query: 584 EEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHI 643
+ L++ + + YV L+N+YAA G W E+ R+R QM+ + G SW + +++++
Sbjct: 452 AKMLVQSDSVSSGPYVMLSNIYAAAGMWGEVNRVRGQMKEKGVKKQPGYSWTEIANKVNM 511
Query: 644 FTVGDVSHPKTNAIYSVL 661
F GD SHP+ N I S L
Sbjct: 512 FVGGDASHPEMNKIISEL 529
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/461 (25%), Positives = 231/461 (50%), Gaps = 31/461 (6%)
Query: 41 LRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINA 100
L +R+LFD+MP RNV SWN++++ C+ DL A + F +P +++ ++N+ML G +
Sbjct: 55 LPAARRLFDDMPSRNVISWNSVVAGCLAHGDLDAASAYFARAPRRNVASWNAMLAGLVRL 114
Query: 101 EGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASG 160
G DA LF EM + + + T+ ++ + V R++ M + +
Sbjct: 115 -GRMDDAWALFGEMP------QRNVVSYTTMVDGLARRGEVARAREVFDAMPERNL---- 163
Query: 161 FAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPE 220
+ +++I Y + ++EA ++FE ++ N+++ AM+ C++G++E A + F P
Sbjct: 164 VSWAAMITGYVENAMFDEARKLFEAMPDK-NVVACTAMITGYCKDGDVESARRLFDGIP- 221
Query: 221 LNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKE 280
+ D +SWN +I+GYV NG EE +KL + M GV+ + T + L+AC L ++ +
Sbjct: 222 VKDVISWNAMITGYVHNGHGEEAMKLHIIMFREGVKPDHATLIAILTACSALALLRQGRS 281
Query: 281 IHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGN 340
H+ K L S+ + ++ +Y KC N+ +E + + +++ S +++I Y+ G
Sbjct: 282 THAVATKTMLESSTSFCNALMTMYSKCGNVGESELVFMNLKIQDIVSWNTIIAAYAQHGK 341
Query: 341 MEEARRHFD-----SLTEKNVVVWTALFS-GYV-KAQNCEALFDLL-SEFVTKEGVVTDA 392
++A F L ++ + + L + G+V + + LFDL+ S++ A
Sbjct: 342 YQKAIALFHEMETRGLIPNDITILSMLSACGHVGRVNDSLELFDLMSSKYAISPSAEHYA 401
Query: 393 LILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQN 452
++ IL A L+ A +YI +M + ++ + L+ GN+ E+ +
Sbjct: 402 CVVDILGRAGQLEKAC-------SYIKKMPFEAERNVWGALLGASKTHGNVQLGELAAKM 454
Query: 453 FIERDLV---LYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
++ D V Y ++ YA G + + +M EKG+K
Sbjct: 455 LVQSDSVSSGPYVMLSNIYAAAGMWGEVNRVRGQMKEKGVK 495
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 122/239 (51%), Gaps = 36/239 (15%)
Query: 31 LIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTY 90
+I Y ++ + E+RKLF+ MP++NV + +I+ K D++ AR LFD P KD++++
Sbjct: 169 MITGYVENAMFDEARKLFEAMPDKNVVACTAMITGYCKDGDVESARRLFDGIPVKDVISW 228
Query: 91 NSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAF 150
N+M+ GY++ G+ +A+KL I M E ++ D T+ + L C L + GR HA
Sbjct: 229 NAMITGYVH-NGHGEEAMKLHIIMFR--EGVKPDHATLIAILTACSALALLRQGRSTHAV 285
Query: 151 MVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEM 210
KT ++S ++L+ MYSKC E+ VF M
Sbjct: 286 ATKTMLESSTSFCNALMTMYSKCGNVGESELVF--------------------------M 319
Query: 211 ALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
LK + D VSWNT+I+ Y Q+G ++ + LF M G+ N+ T S LSAC
Sbjct: 320 NLK-------IQDIVSWNTIIAAYAQHGKYQKAIALFHEMETRGLIPNDITILSMLSAC 371
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 9/117 (7%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L++ H A K L +T N L+ +YSK + ES +F + +++ SWNTII+A
Sbjct: 276 LRQGRSTHAVATKTMLESSTSFCNALMTMYSKCGNVGESELVFMNLKIQDIVSWNTIIAA 335
Query: 66 CIKSHDLKQARSLFDSSPHKDL----VTYNSML--CGYINAEGYEADALKLFIEMQS 116
+ ++A +LF + L +T SML CG++ G D+L+LF M S
Sbjct: 336 YAQHGKYQKAIALFHEMETRGLIPNDITILSMLSACGHV---GRVNDSLELFDLMSS 389
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 153/456 (33%), Positives = 247/456 (54%), Gaps = 39/456 (8%)
Query: 221 LNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKE 280
+ D+VSW+ ++ G+ + GD F + G R + +T + AC L+N++ +
Sbjct: 122 VRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRL 181
Query: 281 IHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGN 340
IH V K GL + FV + +VD+Y KC +
Sbjct: 182 IHHIVYKFGLDLDHFVCAALVDMYVKCREI------------------------------ 211
Query: 341 MEEARRHFDSLTEKNVVVWTALFSGYV---KAQNCEALFDLLSEFVTKEGVVTDALILVI 397
E+AR FD + E+++V WT + GY KA LF+ + E EGVV D + +V
Sbjct: 212 -EDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMRE----EGVVPDKVAMVT 266
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD 457
++ ACA A+H + I YI R Q+D L + ++DMY+KCG + A IF E++
Sbjct: 267 VVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKN 326
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFN 517
++ ++ MIA Y +HG KA+ LF ML G+ PD +T ++L A H G VE G ++F+
Sbjct: 327 VISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFS 386
Query: 518 SMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNA 577
SM DY + + HY C++DL GRA +L++A++ +KS+ E+D + G+FL CR +++
Sbjct: 387 SMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGACRTHKDV 446
Query: 578 ELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYV 637
LA +A LL L+ N YV L+N+YA G W ++ +IR M + + G +W+ V
Sbjct: 447 VLAEKAATSLLELQSQNPGHYVLLSNIYANAGRWEDVAKIRDLMSQRRLKKTPGWTWIEV 506
Query: 638 EHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIAG 673
+++ H F+VGD +HP++ IY +L + +L E+ G
Sbjct: 507 DNKSHQFSVGDTTHPRSKEIYEMLKSLSNKL-ELVG 541
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 150/456 (32%), Positives = 245/456 (53%), Gaps = 39/456 (8%)
Query: 221 LNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKE 280
+ D+VSW+ ++ G+ + GD F + G R + +T + AC L+N++ +
Sbjct: 798 VRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRL 857
Query: 281 IHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGN 340
IH V K GL + FV + +VD+Y KC +
Sbjct: 858 IHHIVYKFGLDLDHFVCAALVDMYGKCREI------------------------------ 887
Query: 341 MEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE---ALFDLLSEFVTKEGVVTDALILVI 397
E+AR FD + E+++V WT + GY + N LFD + E EGVV D + +V
Sbjct: 888 -EDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMRE----EGVVPDKVAMVT 942
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD 457
++ ACA A+H + I YI R Q+D L + ++DM++KCG + A IF E++
Sbjct: 943 VVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKN 1002
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFN 517
++ ++ MIA Y +HG KA+ LF ML GI P+ +T V++L A H G VE G ++F+
Sbjct: 1003 VISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFS 1062
Query: 518 SMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNA 577
M DY + + HY C++DL GRA +L++A++ + S+ E+D + G+FL CR +++
Sbjct: 1063 XMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLGACRTHKDV 1122
Query: 578 ELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYV 637
LA +A LL L+ N Y+ L+N+YA G W ++ +IR M + + G +W+ V
Sbjct: 1123 XLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQRRLKKIPGWTWIEV 1182
Query: 638 EHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIAG 673
+++ H F+VGD +HP++ IY +L +L E+ G
Sbjct: 1183 DNKSHQFSVGDTTHPRSKEIYEMLKSLGNKL-ELVG 1217
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/469 (23%), Positives = 183/469 (39%), Gaps = 102/469 (21%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
NL + H QA G+ + N+LI+ YS + L ++ LFD M R+ SW+ ++
Sbjct: 74 NLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVG 133
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
K D YIN G + ++ R D
Sbjct: 134 GFAKVGD-------------------------YINCFGTFRELIRC---------GARPD 159
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
+T+ + C L N+ GR +H + K D F ++L+DMY KCR E+A +F+
Sbjct: 160 NYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFD 219
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
E D V+W +I GY + G A E L
Sbjct: 220 KMQER---------------------------------DLVTWTVMIGGYAECGKANESL 246
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
LF +M E GV ++ + + AC L + A+ I ++ + + + + ++D+Y
Sbjct: 247 VLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMY 306
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
KC G +E AR FD + EKNV+ W+A+ +
Sbjct: 307 AKC-------------------------------GCVESAREIFDRMEEKNVISWSAMIA 335
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR-MGV 423
Y DL ++ G++ D + L LL AC+ + G + + V
Sbjct: 336 AYGYHGQGRKALDLFPMMLS-SGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSV 394
Query: 424 QMDKKLISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMI-ACYAH 470
+ D K + +VD+ + G + A ++I IE+D L+ + AC H
Sbjct: 395 RTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGACRTH 443
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 109/469 (23%), Positives = 183/469 (39%), Gaps = 102/469 (21%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
NL + H QA G+ I N+L+ YS + L ++ LFD M R+ SW+ ++
Sbjct: 750 NLTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVG 809
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
K D F ++L+ CG R D
Sbjct: 810 GFAKVGDYMNCFGTF-----RELIR-----CG------------------------ARPD 835
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
+T+ + C L N+ GR +H + K D F ++L+DMY KCR E+A +F+
Sbjct: 836 NYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFD 895
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
E D V+W +I GY + G+A E L
Sbjct: 896 KMXER---------------------------------DLVTWTVMIGGYAECGNANESL 922
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
LF +M E GV ++ + + AC L + A+ I ++ + + + + ++D++
Sbjct: 923 VLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMH 982
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
KC G +E AR FD + EKNV+ W+A+ +
Sbjct: 983 AKC-------------------------------GCVESAREIFDRMEEKNVISWSAMIA 1011
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR-MGV 423
Y DL + + G++ + + LV LL AC+ + G + + V
Sbjct: 1012 AYGYHGQGRKALDLFP-MMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSV 1070
Query: 424 QMDKKLISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMI-ACYAH 470
+ D K + +VD+ + G + A ++I E+D L+ + AC H
Sbjct: 1071 RXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLGACRTH 1119
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 141/354 (39%), Gaps = 78/354 (22%)
Query: 256 RWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAES 315
R N + SAL C RN+ +++H+ +G++ N V++
Sbjct: 59 RLNPKFYISALVNC---RNLTQVRQVHAQASVHGMLENIVVAN----------------- 98
Query: 316 MLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEAL 375
+I YS +++A FD + ++ V W+ + G+ K +
Sbjct: 99 --------------KLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINC 144
Query: 376 FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVD 435
F E + + G D L ++ AC L G+ IH + + G+ +D + + LVD
Sbjct: 145 FGTFRELI-RCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVD 203
Query: 436 MYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVT 495
MY KC + A +F ERDLV + VMI YA G ++++LFE+M E+G+ PD V
Sbjct: 204 MYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVA 263
Query: 496 FV-----------------------------------AILSAFRHCGSVEMGEKYFNSMT 520
V A++ + CG VE + F+ M
Sbjct: 264 MVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRME 323
Query: 521 ADYKISPETDHYACMIDLYGRANQLEKAIEF---MKSIPTEEDAVILGSFLNVC 571
IS ++ MI YG Q KA++ M S D + L S L C
Sbjct: 324 EKNVIS-----WSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYAC 372
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 115/242 (47%), Gaps = 4/242 (1%)
Query: 322 VRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSE 381
++N + ++ YS +++A FD + ++ V W+ + G+ K + F E
Sbjct: 767 LQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRE 826
Query: 382 FVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
+ + G D L ++ AC L G+ IH + + G+ +D + + LVDMY KC
Sbjct: 827 LI-RCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCR 885
Query: 442 NMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
+ A +F ERDLV + VMI YA G+ ++++LF++M E+G+ PD V V ++
Sbjct: 886 EIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVF 945
Query: 502 AFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDA 561
A G++ + + K + MID++ + +E A E + EE
Sbjct: 946 ACAKLGAMHKA-RTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRM--EEKN 1002
Query: 562 VI 563
VI
Sbjct: 1003 VI 1004
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 82/181 (45%), Gaps = 10/181 (5%)
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
+++HA G+ + + + L+ YS + A +F RD V ++VM+ +A
Sbjct: 79 RQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 138
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH 531
G F E++ G +PD T ++ A R +++MG + + YK + DH
Sbjct: 139 GDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIV---YKFGLDLDH 195
Query: 532 YAC--MIDLYGRANQLEKAIEFMKSIPTEED----AVILGSFLNVCRLNRNAELAGEAEE 585
+ C ++D+Y + ++E A F+ E D V++G + + N + L + E
Sbjct: 196 FVCAALVDMYVKCREIEDA-RFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMRE 254
Query: 586 K 586
+
Sbjct: 255 E 255
>gi|357156786|ref|XP_003577575.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 694
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 198/656 (30%), Positives = 313/656 (47%), Gaps = 83/656 (12%)
Query: 25 TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPH 84
T++ N ++ ++H + ++R+LFDE+P RN SWN +I+AC + AR LFD+ P
Sbjct: 42 TVSYNAMLSALARHGRIADARRLFDEIPRRNTVSWNAMIAACSDHGRVADARDLFDAMPA 101
Query: 85 KDLVT--------------------------------YNSMLCGYINAEGYEADALKLFI 112
+D + YN+M+ GY G DA+ L
Sbjct: 102 RDGFSWTLMVSCYARAGELGLARDALDRMPGDKCTACYNAMISGYAK-HGRFDDAVALLR 160
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVG-FGRQLHAFMVKTSNDASGFAVSSLIDMYS 171
EM + D + S ++ V L G R + F + D + + +++ Y
Sbjct: 161 EMPAPD---------IISWNSVLVGLTRNGEMVRAVKFFDEMPARDMVSWNL--MLEGYV 209
Query: 172 KCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLI 231
+ + A +F G N++S ++ CR G + A + F R P+ N A +WN ++
Sbjct: 210 RAGDVDSAAGLFAGVPSP-NVVSWVTLLNGYCRAGRIGEARELFDRIPDRNVA-AWNVML 267
Query: 232 SGYVQNGDAEEGLKLFVRMGE-NGVRWNEHTFASALSACCGLRNVKCAKE---IHSWVLK 287
SGY++ EE KLF M + N + W T SAL L+ K + S+ K
Sbjct: 268 SGYLRLSHMEEAYKLFTEMPDKNSISWT--TMISALVRGGKLQEAKDLLDKMPFDSFAAK 325
Query: 288 NGLISNPFVSSGIVDV---------------------YCKCENMNYAESMLLLKGVRNSF 326
L+ S I D Y C ++ E+M+L + + N
Sbjct: 326 TALMHGYLQSKMIDDARLIFDGLEVRDAVCWNTMISGYVHCGMLD--EAMVLFQQMPNKD 383
Query: 327 SIS--SMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV- 383
+S +MI GY+ G M +A F + ++N V W ++ SG+V+ C + L FV
Sbjct: 384 MVSWNTMIAGYAHDGQMRKAVGIFRKMNQRNTVSWNSVISGFVQNGLC---VEALQHFVL 440
Query: 384 -TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGN 442
++ D L ACA AALH G++ H+ + R G D + L+ Y+KCG
Sbjct: 441 MRRDAKRADWSTYACCLSACADLAALHVGRQFHSLLARSGYIGDSFAGNALISAYAKCGR 500
Query: 443 MTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
+ A +F D+V +N +I YA +GH +AI +F EM + ++PD VTFV +LSA
Sbjct: 501 ILEARQVFDEMPAPDIVSWNALIDGYASNGHGTEAISVFREMEDNDVRPDEVTFVGVLSA 560
Query: 503 FRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAV 562
H G ++ G +FNSMT DY + P +HYACM+DL GR+ +L +A E ++ + + +A
Sbjct: 561 CSHAGLIDEGFDFFNSMTKDYALRPVAEHYACMVDLLGRSGRLSEAFEIIQGMQVQPNAG 620
Query: 563 ILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIR 618
+ G+ L CR+++N ELA A EKL LE + + YV L+N+ A G W E +R
Sbjct: 621 VWGAMLGACRVHKNHELAQLAAEKLYELEPHKTSNYVLLSNITAEAGKWDEAQNMR 676
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 134/509 (26%), Positives = 221/509 (43%), Gaps = 69/509 (13%)
Query: 28 TNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDL 87
+NQ + ++ L +R+LFD MP RN S+N ++SA + + AR LFD P ++
Sbjct: 14 SNQELTRLARSGQLAAARRLFDSMPSRNTVSYNAMLSALARHGRIADARRLFDEIPRRNT 73
Query: 88 VTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQL 147
V++N+M+ + G ADA LF M + D F+ T ++ + +G R
Sbjct: 74 VSWNAMIAA-CSDHGRVADARDLFDAMPA------RDGFSWTLMVSCYARAGELGLARDA 126
Query: 148 HAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGE 207
+ + D +++I Y+K +++A + ++IS N+++ R GE
Sbjct: 127 ---LDRMPGDKCTACYNAMISGYAKHGRFDDAVALLREMPAP-DIISWNSVLVGLTRNGE 182
Query: 208 MEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALS 267
M A+K F P D VSWN ++ GYV+ GD + LF GV
Sbjct: 183 MVRAVKFFDEMPA-RDMVSWNLMLEGYVRAGDVDSAAGLFA-----GV------------ 224
Query: 268 ACCGLRNVKCAKEIHSWV-LKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSF 326
+ + SWV L NG YC+ + A + RN
Sbjct: 225 ---------PSPNVVSWVTLLNG--------------YCRAGRIGEARELFDRIPDRNVA 261
Query: 327 SISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKE 386
+ + M+ GY +MEEA + F + +KN + WT + S V+ + DLL +
Sbjct: 262 AWNVMLSGYLRLSHMEEAYKLFTEMPDKNSISWTTMISALVRGGKLQEAKDLLDKMPFDS 321
Query: 387 GVVTDALILVILLGACALQAAL-HPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTY 445
AL+ L A L G E+ D +T++ Y CG +
Sbjct: 322 FAAKTALMHGYLQSKMIDDARLIFDGLEVR----------DAVCWNTMISGYVHCGMLDE 371
Query: 446 AEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRH 505
A ++FQ +D+V +N MIA YAH G KA+ +F +M ++ + V++ +++S F
Sbjct: 372 AMVLFQQMPNKDMVSWNTMIAGYAHDGQMRKAVGIFRKMNQR----NTVSWNSVISGFVQ 427
Query: 506 CGSVEMGEKYFNSMTADYKISPETDHYAC 534
G ++F M D K + + YAC
Sbjct: 428 NGLCVEALQHFVLMRRDAKRA-DWSTYAC 455
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 79/196 (40%), Gaps = 45/196 (22%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H ++G + N LI Y+K + E+R++FDEMP ++ SWN +I
Sbjct: 473 HSLLARSGYIGDSFAGNALISAYAKCGRILEARQVFDEMPAPDIVSWNALID-------- 524
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
GY + G+ +A+ +F EM+ D +R DE T L
Sbjct: 525 -----------------------GYA-SNGHGTEAISVFREME--DNDVRPDEVTFVGVL 558
Query: 133 NLC--VKLLNVGFGRQLHAFMVKTSNDASGFAVSS----LIDMYSKCRCYEEACRVFEGC 186
+ C L++ GF F + D + V+ ++D+ + EA + +G
Sbjct: 559 SACSHAGLIDEGFD-----FFNSMTKDYALRPVAEHYACMVDLLGRSGRLSEAFEIIQGM 613
Query: 187 TEEVNLISKNAMVAAC 202
+ N AM+ AC
Sbjct: 614 QVQPNAGVWGAMLGAC 629
>gi|297744641|emb|CBI37903.3| unnamed protein product [Vitis vinifera]
Length = 516
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 162/464 (34%), Positives = 257/464 (55%), Gaps = 5/464 (1%)
Query: 117 ADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASG-FAVSSLIDMYSKCRC 175
A +R+D T+ S L C + G+++H + T G F + LI+MY+KC
Sbjct: 51 ARRGLRLDSRTLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHLINMYAKCGK 110
Query: 176 YEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYV 235
EA +VF+ + NL S N M++ + G ++ A K F + PE D VSWNT++ +
Sbjct: 111 EVEARKVFDKMSAR-NLYSWNNMLSGYAKLGMIKPARKLFDKMPE-KDVVSWNTMVIAHA 168
Query: 236 QNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF 295
Q G +E L+ + + G++ N +FA L+ C L+ V +++H +L G +SN
Sbjct: 169 QCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVV 228
Query: 296 VSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKN 355
+SS ++D Y KC M A + R+ + ++M+ GY+ G+M+ A F + EKN
Sbjct: 229 LSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMPEKN 288
Query: 356 VVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIH 415
V WTAL SGY + +L ++ + V D L ACA A+L GK+IH
Sbjct: 289 PVSWTALISGYARNGMGHKALELFTKMMLFH-VRPDQFTFSSCLCACASIASLKHGKQIH 347
Query: 416 AYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER-DLVLYNVMIACYAHHGHE 474
AY+LR+ Q + ++S L+DMYSKCG++ +F + D+VL+N +I+ A HG
Sbjct: 348 AYLLRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQHGCG 407
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC 534
E+AI + ++M+ G KPD +TFV IL+A H G V+ G +F SM+ DY I P +HYAC
Sbjct: 408 EEAIQMLDDMVRSGAKPDKITFVVILNACSHSGLVQQGLNFFESMSCDYGIVPSQEHYAC 467
Query: 535 MIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAE 578
+IDL GRA E+ ++ ++ +P + D + + L VCR++ + E
Sbjct: 468 LIDLLGRAGCFEEVMDQLEKMPYKPDDRVWNALLGVCRIHGHIE 511
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 136/479 (28%), Positives = 237/479 (49%), Gaps = 49/479 (10%)
Query: 6 LKEALICHVQAIKAGLTLT-TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
L+E H+ GL T +N LI++Y+K E+RK+FD+M RN++SWN ++S
Sbjct: 75 LREGKRVHLHLKLTGLKRPGTFLSNHLINMYAKCGKEVEARKVFDKMSARNLYSWNNMLS 134
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
K +K AR LFD P KD+V++N+M+ + GY +AL+ + E + I+ +
Sbjct: 135 GYAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQC-GYWDEALRFYSEFRQLG--IQCN 191
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
F+ L +CVKL VG RQ+H ++ ++ SS++D Y KC +A ++F+
Sbjct: 192 GFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFD 251
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
+ ++++ MV+ + G+M+ A + F PE N VSW LISGY +NG + L
Sbjct: 252 EMSAR-DVLAWTTMVSGYAKWGDMKSANELFVEMPEKN-PVSWTALISGYARNGMGHKAL 309
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
+LF +M VR ++ TF+S L AC + ++K K+IH+++L+ N V S ++D+Y
Sbjct: 310 ELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQPNTIVVSALIDMY 369
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK-NVVVWTALF 363
KC G++ R+ FD + K +VV+W +
Sbjct: 370 SKC-------------------------------GSLGIGRKVFDLMGNKLDVVLWNTII 398
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE-IHAYILRMG 422
S + E +L + V + G D + V++L AC+ + G + G
Sbjct: 399 SALAQHGCGEEAIQMLDDMV-RSGAKPDKITFVVILNACSHSGLVQQGLNFFESMSCDYG 457
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER-----DLVLYNVMIACYAHHGHEEK 476
+ ++ + L+D+ + G + E++ Q +E+ D ++N ++ HGH E+
Sbjct: 458 IVPSQEHYACLIDLLGRAG--CFEEVMDQ--LEKMPYKPDDRVWNALLGVCRIHGHIER 512
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 149/352 (42%), Gaps = 34/352 (9%)
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI-SNPFVSSGIVDVYCKCE 308
+ G+R + T AS L C R ++ K +H + GL F+S+ ++++Y KC
Sbjct: 50 LARRGLRLDSRTLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHLINMYAKCG 109
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
A + RN +S ++M+ GY+ G ++ AR+ FD + EK+VV W + + +
Sbjct: 110 KEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQ 169
Query: 369 AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK 428
+ SEF + G+ + +L C + +++H IL G +
Sbjct: 170 CGYWDEALRFYSEF-RQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVV 228
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
L S+++D Y KCG M A +F RD++ + M++ YA G + A LF EM EK
Sbjct: 229 LSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMPEKN 288
Query: 489 -------------------------------IKPDAVTFVAILSAFRHCGSVEMGEKYFN 517
++PD TF + L A S++ G K +
Sbjct: 289 PVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHG-KQIH 347
Query: 518 SMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLN 569
+ P T + +ID+Y + L + + + D V+ + ++
Sbjct: 348 AYLLRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIIS 399
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 5/138 (3%)
Query: 381 EFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST-LVDMYSK 439
E + + G+ D+ L LL CA AL GK +H ++ G++ +S L++MY+K
Sbjct: 48 ENLARRGLRLDSRTLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHLINMYAK 107
Query: 440 CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
CG A +F R+L +N M++ YA G + A LF++M EK D V++ +
Sbjct: 108 CGKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEK----DVVSWNTM 163
Query: 500 LSAFRHCGSVEMGEKYFN 517
+ A CG + ++++
Sbjct: 164 VIAHAQCGYWDEALRFYS 181
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 78/210 (37%), Gaps = 42/210 (20%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPER-NVFSWNTII 63
+LK H ++ TI + LI +YSK L RK+FD M + +V WNTII
Sbjct: 339 SLKHGKQIHAYLLRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTII 398
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
SA + G +A+++ +M + +
Sbjct: 399 SA--------------------------------LAQHGCGEEAIQMLDDMVRSGA--KP 424
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSND----ASGFAVSSLIDMYSKCRCYEEA 179
D+ T LN C + G +Q F S D S + LID+ + C+EE
Sbjct: 425 DKITFVVILNACS---HSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDLLGRAGCFEEV 481
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEME 209
E + + NA++ C G +E
Sbjct: 482 MDQLEKMPYKPDDRVWNALLGVCRIHGHIE 511
>gi|222622350|gb|EEE56482.1| hypothetical protein OsJ_05706 [Oryza sativa Japonica Group]
Length = 799
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 192/642 (29%), Positives = 328/642 (51%), Gaps = 49/642 (7%)
Query: 29 NQLIHIYSKHNL-LRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDL 87
N L++ H L LR + LFD MP + F ++T + AC ++ S PH+
Sbjct: 40 NSLVNCLEPHPLHLRYALHLFDRMPP-STFLFDTALRACSRA----------GSDPHRPF 88
Query: 88 VTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQL 147
+ + M G D + + R +L LC L
Sbjct: 89 LLFRRM-----RRAGVRPDGFTFHFLFKCSSSSSR------PHSLLLCT---------ML 128
Query: 148 HAFMVKTS-NDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREG 206
HA ++T A+ F +SLI MY + +A R F+ E+++ K+A+ G
Sbjct: 129 HAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFD----EIHV--KDAVAWTMLISG 182
Query: 207 EMEMAL----KTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTF 262
+M + + Q + D +SW +LI+ Y + A E + F M +G+ +E T
Sbjct: 183 LAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTV 242
Query: 263 ASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESML--LLK 320
+ LSAC L++++ + +H V + G+ ++ + ++D+Y KC + +A+ + L +
Sbjct: 243 IAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGR 302
Query: 321 GVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA-QNCEALFDLL 379
G R S +++I GY G+++ AR FD + ++++ + ++ +GY+ + Q EAL +
Sbjct: 303 GPRPQ-SWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFM 361
Query: 380 SEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
S + + + D +V LL ACA AL G+ +HA I + V+ D L + L+DMY K
Sbjct: 362 S--MRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMK 419
Query: 440 CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
CG + A I+FQ +RD+ + MIA A +G + A+ F +M G +P++V+++A+
Sbjct: 420 CGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAV 479
Query: 500 LSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE 559
L+A H + G YF+ M Y I P+ +HY CMIDL GR+ L++A++ +K++P +
Sbjct: 480 LTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQP 539
Query: 560 DAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRK 619
+AVI S L+ CR++++ +LA A E LL+LE + YVQL N+Y W +IR
Sbjct: 540 NAVIWASILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQWENASKIRM 599
Query: 620 QMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
M + + AG S + V ++H F V D SHP+ I ++L
Sbjct: 600 LMEERQVKKTAGYSSITVAGQVHKFVVSDKSHPRILEIIAML 641
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 180/345 (52%), Gaps = 8/345 (2%)
Query: 25 TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPH 84
+N LIH+Y + L ++R+ FDE+ ++ +W +IS K L + L +P
Sbjct: 142 PFVSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPV 201
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
+D++++ S++ Y A +A+ F M S I DE TV + L+ C KL ++ G
Sbjct: 202 RDVISWTSLIAAYSRANRAR-EAVGCFKTMLS--HGIAPDEVTVIAVLSACAKLKDLELG 258
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
R LH + + S V +LIDMY+KC + A +VF+ S NA++ C+
Sbjct: 259 RSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCK 318
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFAS 264
G +++A ++ + + E+ D +++N++++GY+ +G E L LF+ M + +R + T +
Sbjct: 319 HGHVDVA-RSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVN 377
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
L+AC L ++ + +H+ + + + ++ ++ + ++D+Y KC ++ A + G R+
Sbjct: 378 LLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRD 437
Query: 325 SFSISSMIVGYSLQGNMEEARRHFDSLT----EKNVVVWTALFSG 365
+ ++MI G + G + A HF + + N V + A+ +
Sbjct: 438 VHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTA 482
>gi|297847366|ref|XP_002891564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337406|gb|EFH67823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 596
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 161/518 (31%), Positives = 264/518 (50%), Gaps = 67/518 (12%)
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
Q HA ++K D+ F +SLI YS C +E RVF+G TE+
Sbjct: 124 QFHAHILKFGFDSDLFVRNSLISGYSNCGLFEFGSRVFDG-TED---------------- 166
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASA 265
D VSW +I G+V+N + E + FV M +GV NE T S
Sbjct: 167 ----------------KDVVSWTAMIDGFVRNDSSLEAMTYFVEMKRSGVAANEMTVVSV 210
Query: 266 LSACCGLRNVKCAKEIHSWVLKNGLIS-NPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
L A +V+ + IH + L+ G + + F+ S +VD+Y KC
Sbjct: 211 LKATRKAEDVRFGRSIHGFYLEAGRVRCDVFIGSSLVDMYGKC----------------- 253
Query: 325 SFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVT 384
G ++A++ FD + +NVV WTAL +GYV+ + E + E +
Sbjct: 254 --------------GCYDDAQKVFDEMPSRNVVTWTALIAGYVQGRCFEKGMFVFEEML- 298
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
K V + L +L ACA ALH G+ +H Y+++ ++++ + +TL+D Y+KCG +
Sbjct: 299 KSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYVIKNSIEINTTVGTTLIDFYAKCGCLE 358
Query: 445 YAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR 504
A ++F+ E+++ + MI +A HG+ A+ LF ML + P+ VTF+ +LSA
Sbjct: 359 EAILVFERLREKNVYTWTAMINGFAAHGYAIGAVDLFHTMLSSHVSPNEVTFIVVLSACA 418
Query: 505 HCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVIL 564
H G VE G + F SM + + P+ DHYACM+DL+GR LE+A ++ +P E +
Sbjct: 419 HGGLVEEGRRLFLSMKERFNLEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNAVW 478
Query: 565 GSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGM 624
G+ C ++++ EL A ++++L+ ++ RY LAN+Y+ NW ++ R+RKQM+
Sbjct: 479 GALFGSCLIHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDDVARVRKQMKDQ 538
Query: 625 KGNRFAGCSWVYVEHEIHIFTVGDVSHP-KTNAIYSVL 661
+ + GCSW+ V+ ++H F D P +++ +Y L
Sbjct: 539 QVVKSPGCSWIEVKGKLHEFIAFDDKKPLESDDLYKTL 576
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 115/471 (24%), Positives = 206/471 (43%), Gaps = 89/471 (18%)
Query: 3 SLNLKEALICHVQA-IKAGLTLTTITTNQLIH---IYSKHN---LLRESRKLFDEMP--- 52
S+ L ++L+ H + L+ ++ Q+ + S+H LL+ KL D P
Sbjct: 66 SIQLWDSLVGHFSGRVTLNRRLSFLSYRQMRRNGVVPSRHTFPPLLKAVFKLRDANPFQF 125
Query: 53 ---------ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGY 103
+ ++F N++IS + +FD + KD+V++ +M+ G++ +
Sbjct: 126 HAHILKFGFDSDLFVRNSLISGYSNCGLFEFGSRVFDGTEDKDVVSWTAMIDGFVRNDS- 184
Query: 104 EADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSN-DASGFA 162
+A+ F+EM+ + + +E TV S L K +V FGR +H F ++ F
Sbjct: 185 SLEAMTYFVEMKRSG--VAANEMTVVSVLKATRKAEDVRFGRSIHGFYLEAGRVRCDVFI 242
Query: 163 VSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN 222
SSL+DMY KC CY++A +VF+ + S+N
Sbjct: 243 GSSLVDMYGKCGCYDDAQKVFD------EMPSRNV------------------------- 271
Query: 223 DAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIH 282
V+W LI+GYVQ E+G+ +F M ++ V NE T +S LSAC + + + +H
Sbjct: 272 --VTWTALIAGYVQGRCFEKGMFVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVH 329
Query: 283 SWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNME 342
+V+KN + N V + ++D Y KC G +E
Sbjct: 330 CYVIKNSIEINTTVGTTLIDFYAKC-------------------------------GCLE 358
Query: 343 EARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGAC 402
EA F+ L EKNV WTA+ +G+ DL ++ V + + +++L AC
Sbjct: 359 EAILVFERLREKNVYTWTAMINGFAAHGYAIGAVDLFHTMLSSH-VSPNEVTFIVVLSAC 417
Query: 403 ALQAALHPGKEIHAYIL-RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQN 452
A + G+ + + R ++ + +VD++ + G + A+ + +
Sbjct: 418 AHGGLVEEGRRLFLSMKERFNLEPKADHYACMVDLFGRKGLLEEAKALIER 468
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 99/240 (41%), Gaps = 6/240 (2%)
Query: 322 VRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL---FSGYVKAQNCEALFDL 378
R +S ++ + ARR + ++ +W +L FSG V L L
Sbjct: 33 TRRDLFLSRLLRRCTAATQFRYARRLLCQIQTPSIQLWDSLVGHFSGRVTLN--RRLSFL 90
Query: 379 LSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYS 438
+ + GVV LL A +P + HA+IL+ G D + ++L+ YS
Sbjct: 91 SYRQMRRNGVVPSRHTFPPLLKAVFKLRDANPF-QFHAHILKFGFDSDLFVRNSLISGYS 149
Query: 439 KCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVA 498
CG + +F ++D+V + MI + + +A+ F EM G+ + +T V+
Sbjct: 150 NCGLFEFGSRVFDGTEDKDVVSWTAMIDGFVRNDSSLEAMTYFVEMKRSGVAANEMTVVS 209
Query: 499 ILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE 558
+L A R V G ++ + + ++D+YG+ + A + +P+
Sbjct: 210 VLKATRKAEDVRFGRSIHGFYLEAGRVRCDVFIGSSLVDMYGKCGCYDDAQKVFDEMPSR 269
>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 178/657 (27%), Positives = 311/657 (47%), Gaps = 98/657 (14%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
++L + + + H+ + I N LI+ Y+K N + + LFD MPERNV SW
Sbjct: 43 KNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDRMPERNVVSW-- 100
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
++++ GY+ G+ ++L +M S + ++
Sbjct: 101 -----------------------------SALMTGYL-LNGFSLKVIRLLKDMIS-EGNV 129
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+E+ + ++ C V GRQ H ++KT + ++L+ MYSKC ++A
Sbjct: 130 SPNEYILAIAISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMG 189
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
V W + +ND V++N+++S V+NG
Sbjct: 190 V---------------------------------WNEVPVNDIVAYNSILSSLVENGYLR 216
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
EGL++ M V+W++ TF +A S C L++++ +H +L + + + +VSS I+
Sbjct: 217 EGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAII 276
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
++Y KC G SL AR FD L +NVV+WTA
Sbjct: 277 NMYGKC--------------------------GKSLM-----ARGVFDGLQSRNVVLWTA 305
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+ + + E +L S+ + +E V ++ +LL ACA +A G +H + +
Sbjct: 306 VMASCFQNGCFEEALNLFSK-MEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKS 364
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
G + + + L++MY+K G++ A+ +F + + RD++ +N MI ++HHG +KA+L+F
Sbjct: 365 GFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVF 424
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGR 541
++ML P+ VTF +LSA H G V+ G Y + + + + P +HY C++ L +
Sbjct: 425 QDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSK 484
Query: 542 ANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQL 601
QL +A FM++ P + D V + LN C +++N L E +L ++ N+ Y L
Sbjct: 485 TGQLNEARNFMRTAPVKWDVVAWRTLLNACHVHQNYGLGRWVAEFVLEMDPNDVGTYTLL 544
Query: 602 ANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
+N+YA E W + ++RK MR K + G SW+ + + HIFT D HP Y
Sbjct: 545 SNIYAKEKRWDGVVKVRKLMRDKKIKKEPGVSWIEIGNVTHIFTSEDNKHPDYGQTY 601
>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 178/617 (28%), Positives = 300/617 (48%), Gaps = 69/617 (11%)
Query: 57 FSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQS 116
F ++I K ++ A ++D D T N ++ Y G+ A ++F MQ
Sbjct: 149 FVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYAR-NGFFVQAFQVF--MQI 205
Query: 117 ADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCY 176
+ R + +T ++ L +C + + G+QLHA +VK + ++L+ +YSKC
Sbjct: 206 GNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMM 265
Query: 177 EEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQ 236
EEA VFE + + +SW I+G+ Q
Sbjct: 266 EEAEIVFESLRQR---------------------------------NIISWTASINGFYQ 292
Query: 237 NGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFV 296
+GD ++ LK F M E+G+ NE TF+ L++C +++ + H+ V+K G+ S FV
Sbjct: 293 HGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFV 352
Query: 297 SSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK-N 355
+ I+D+Y S G M+EA + F + +
Sbjct: 353 GTAIIDMY-------------------------------SGLGEMDEAEKQFKQMGRAAS 381
Query: 356 VVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIH 415
V W AL +GYV + E + V KE V + + AC+ +L +IH
Sbjct: 382 NVSWNALIAGYVLNEKIEKAMEAFCRMV-KEDVACNEFTYSNIFKACSSFPSLATTVQIH 440
Query: 416 AYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEE 475
+ +++ V+ + + S+L++ Y++CG++ A +F + D+V +N +I Y+ +G
Sbjct: 441 SRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNGDPW 500
Query: 476 KAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACM 535
KAI L +M+E+G KP + TF+ +LSA H G V+ G+++F SM DY I PE H +CM
Sbjct: 501 KAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCM 560
Query: 536 IDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNK 595
+D+ GRA QLE A++F+K + + A I L CR N N ++A EK+L LE N+
Sbjct: 561 VDILGRAGQLENALDFIKKLTMKPTASIWRPLLAACRYNSNLQMAEYVAEKILDLEPNDA 620
Query: 596 ARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTN 655
YV L+N+YA G WA+ R+ M + ++ GCSW+ V ++++ F D +HP+
Sbjct: 621 TVYVTLSNMYAEVGRWADAENQRRLMEQKEISKEPGCSWIEVNNKMYKFFSHDKAHPEMP 680
Query: 656 AIYSVLAIFTGELYEIA 672
+Y L ++ +I
Sbjct: 681 KVYEKLKQLVRQIQDIG 697
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 159/469 (33%), Positives = 244/469 (52%), Gaps = 41/469 (8%)
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASA 265
G++ A K F + P N W L + G EE L F M + G+R N+ S
Sbjct: 852 GQLSNARKLFDKIPNTN-IRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSI 910
Query: 266 LSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA------------ 313
L AC L + + + +H+ +LKN S+ ++ S ++ +Y KC ++ A
Sbjct: 911 LKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDL 970
Query: 314 -----------------ESMLLLK-----GVR-NSFSISSMIVGYSLQGNMEEARRHFDS 350
E++ L++ GV+ N S +++I G+S G+ F
Sbjct: 971 VVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRL 1030
Query: 351 LT----EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQA 406
+T E +VV WT++ SG+V+ + FD E + +G ++ + LL AC A
Sbjct: 1031 MTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEML-DQGFCPSSVTISSLLPACTNVA 1089
Query: 407 ALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIA 466
L GKEIH Y + +GV+ D + S LVDMY+KCG ++ A+I+F ER+ V +N +I
Sbjct: 1090 NLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIF 1149
Query: 467 CYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKIS 526
YA+HG+ +AI LF +M E K D +TF A+L+A H G VE+GE F M Y+I
Sbjct: 1150 GYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYRIE 1209
Query: 527 PETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEK 586
P +HYACM+DL GRA +L +A + +K++P E D + G+ L CR + N ELA A E
Sbjct: 1210 PRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEH 1269
Query: 587 LLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWV 635
L LE + + L+N+YA G W +++K M+ K +F GCSW+
Sbjct: 1270 LFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWI 1318
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 134/501 (26%), Positives = 217/501 (43%), Gaps = 92/501 (18%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R+L AL H+ I GL T +L+ Y++ L +RKLFD++P N+ W
Sbjct: 817 RALYRGRALHAHLVII--GLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIV 874
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+ AC + G+ +AL F EMQ E +
Sbjct: 875 LTGACAR--------------------------------RGFYEEALSAFSEMQK--EGL 900
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
R ++F + S L C L + G +H ++K S ++ + +S+LI MYSKC E+ACR
Sbjct: 901 RPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACR 960
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWR------QPEL-------------- 221
VF+ ++ +L+ NAMV+ + G + AL + +P +
Sbjct: 961 VFDWIVDK-DLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVG 1019
Query: 222 ------------------NDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
D VSW ++ISG+VQN EG F M + G + T +
Sbjct: 1020 DKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTIS 1079
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
S L AC + N++ KEIH + + G+ + +V S +VD+Y KC ++ A+ + + R
Sbjct: 1080 SLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPER 1139
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA-------QNCEALF 376
N+ + +S+I GY+ G EA F+ + E + + F+ + A + E+LF
Sbjct: 1140 NTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLF 1199
Query: 377 DLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY--ILRMGVQMDKKLISTLV 434
+ E E + +V LLG GK AY I M V+ DK + L+
Sbjct: 1200 XKMQEKYRIEPRLEHYACMVDLLG--------RAGKLSEAYDLIKAMPVEPDKFVWGALL 1251
Query: 435 DMYSKCGNMTYAEIIFQNFIE 455
GN+ AE+ ++ E
Sbjct: 1252 GACRNHGNIELAEVAAEHLFE 1272
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 196/450 (43%), Gaps = 72/450 (16%)
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
V S L+ C + V GR+ H F+VK + F +SLIDMY+KC
Sbjct: 116 VFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKC-------------- 161
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
GE++ A++ + + L DA + N LIS Y +NG + ++F
Sbjct: 162 ------------------GEVDSAVRVYDKMTSL-DAATCNCLISAYARNGFFVQAFQVF 202
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
+++G G R N +T+++ L+ C + ++ K++H+ V+K +S V + ++ +Y KC
Sbjct: 203 MQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKC 262
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
G MEEA F+SL ++N++ WTA +G+
Sbjct: 263 -------------------------------GMMEEAEIVFESLRQRNIISWTASINGFY 291
Query: 368 KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDK 427
+ + + S + + G+ + I+L +C G+ H +++ G+
Sbjct: 292 QHGDFKKALKQFS-MMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGV 350
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQNFIE-RDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
+ + ++DMYS G M AE F+ V +N +IA Y + EKA+ F M++
Sbjct: 351 FVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVK 410
Query: 487 KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY--ACMIDLYGRANQ 544
+ + + T+ I F+ C S + K + E++ + + +I+ Y +
Sbjct: 411 EDVACNEFTYSNI---FKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGS 467
Query: 545 LEKAIEFMKSIPTEEDAVILGSFLNVCRLN 574
LE A++ I ++ D V S + N
Sbjct: 468 LENAVQVFTQI-SDADVVSWNSIIKAYSQN 496
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 108/505 (21%), Positives = 210/505 (41%), Gaps = 103/505 (20%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
++E H +K T N L+ +YSK ++ E+ +F+ + +RN+ SW I+
Sbjct: 230 IQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASING 289
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
+ D K+ ALK F M+ + I +E
Sbjct: 290 FYQHGDFKK--------------------------------ALKQFSMMRESG--IEPNE 315
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
FT + L C + + GR H ++K + F +++IDMYS
Sbjct: 316 FTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGL------------ 363
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
GEM+ A K F + VSWN LI+GYV N E+ ++
Sbjct: 364 --------------------GEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAME 403
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
F RM + V NE T+++ AC ++ +IHS ++K+ + SN V+S +++ Y
Sbjct: 404 AFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYT 463
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
+C G++E A + F +++ +VV W ++
Sbjct: 464 QC-------------------------------GSLENAVQVFTQISDADVVSWNSIIKA 492
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR-MGVQ 424
Y + + LL + + +EG + + +L AC+ + G+E +++ +Q
Sbjct: 493 YSQNGDPWKAIFLLRKMI-EEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQ 551
Query: 425 MDKKLISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
++ S +VD+ + G + A + I + ++ ++ ++A ++ + + A + E+
Sbjct: 552 PEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPLLAACRYNSNLQMAEYVAEK 611
Query: 484 MLEKGIKP-DAVTFVAILSAFRHCG 507
+L+ ++P DA +V + + + G
Sbjct: 612 ILD--LEPNDATVYVTLSNMYAEVG 634
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 104/448 (23%), Positives = 191/448 (42%), Gaps = 65/448 (14%)
Query: 169 MYSKCRCYEEA---CRVFEGC-----TEEVN-LISKNAMVAACCREG-------EMEMAL 212
M S +CY + C + GC + +N +IS + C +G ++ A
Sbjct: 1 MASPLKCYSSSWPTCSLLPGCIAVDLQKNINPIISASGPYKGCMSKGNVVGGWVDLNNAC 60
Query: 213 KTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK---LFVRMGENGVRWN------EHTFA 263
F + P+ + SG D EEG+K F R V + ++ F
Sbjct: 61 ILFEKTPKRIGVSITESHRSGCTD--DPEEGVKEAGFFTRNETPHVEFGGGFPHRQYVF- 117
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
SALS C V+ + H +V+K GL S+ FV + ++D+Y KC
Sbjct: 118 SALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKC---------------- 161
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV 383
G ++ A R +D +T + L S Y + F + + +
Sbjct: 162 ---------------GEVDSAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQ-I 205
Query: 384 TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNM 443
G + +L C +A+ GK++HA++++M + + + L+ +YSKCG M
Sbjct: 206 GNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMM 265
Query: 444 TYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAF 503
AEI+F++ +R+++ + I + HG +KA+ F M E GI+P+ TF +L++
Sbjct: 266 EEAEIVFESLRQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLAS- 324
Query: 504 RHCGSVE--MGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDA 561
CG V+ + + F++ ++ +ID+Y ++++A + K +
Sbjct: 325 --CGCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASN 382
Query: 562 VILGSFLNVCRLNRNAELAGEAEEKLLR 589
V + + LN E A EA ++++
Sbjct: 383 VSWNALIAGYVLNEKIEKAMEAFCRMVK 410
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 84/169 (49%), Gaps = 6/169 (3%)
Query: 403 ALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYN 462
A AL+ G+ +HA+++ +G+ + L+ Y++CG ++ A +F ++ +
Sbjct: 814 ARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWI 873
Query: 463 VMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTAD 522
V+ A G E+A+ F EM ++G++P+ +IL A H GE N T
Sbjct: 874 VLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGE---NMHTVI 930
Query: 523 YKISPETDHY--ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLN 569
K S E+D Y + +I +Y + +EKA I ++D V++ + ++
Sbjct: 931 LKNSFESDAYIISALIYMYSKCGHVEKACRVFDWI-VDKDLVVMNAMVS 978
>gi|15240591|ref|NP_196831.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181128|sp|Q9LYU9.1|PP378_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g13270, chloroplastic; Flags: Precursor
gi|7529282|emb|CAB86634.1| putative protein [Arabidopsis thaliana]
gi|332004490|gb|AED91873.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 752
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 190/653 (29%), Positives = 307/653 (47%), Gaps = 71/653 (10%)
Query: 18 KAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEM----PERNVFSWNTIISACIKSHDLK 73
KAG+++++ + L + L R L D M +V N ++ + L+
Sbjct: 76 KAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLE 135
Query: 74 QARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLN 133
A LFD + V+ +M+ Y +G A+ LF M ++ + + T+ L
Sbjct: 136 DADKLFDEMSELNAVSRTTMISAYAE-QGILDKAVGLFSGMLASGD--KPPSSMYTTLLK 192
Query: 134 LCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLI 193
V + FGRQ+HA +++ ++ + +++MY KC A RVF+
Sbjct: 193 SLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFD--------- 243
Query: 194 SKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGEN 253
+MA+K V+ L+ GY Q G A + LKLFV +
Sbjct: 244 ---------------QMAVKK---------PVACTGLMVGYTQAGRARDALKLFVDLVTE 279
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA 313
GV W+ F+ L AC L + K+IH+ V K GL S V + +VD Y KC
Sbjct: 280 GVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKC------ 333
Query: 314 ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE 373
+ E A R F + E N V W+A+ SGY + E
Sbjct: 334 -------------------------SSFESACRAFQEIREPNDVSWSAIISGYCQMSQFE 368
Query: 374 ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL 433
+K + ++ + AC++ A + G ++HA ++ + + S L
Sbjct: 369 EAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESAL 428
Query: 434 VDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDA 493
+ MYSKCG + A +F++ D+V + I+ +A++G+ +A+ LFE+M+ G+KP++
Sbjct: 429 ITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNS 488
Query: 494 VTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMK 553
VTF+A+L+A H G VE G+ ++M Y ++P DHY CMID+Y R+ L++A++FMK
Sbjct: 489 VTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMK 548
Query: 554 SIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAE 613
++P E DA+ FL+ C ++N EL A E+L +L+ + A YV N+Y G W E
Sbjct: 549 NMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEE 608
Query: 614 MGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTG 666
+ K M + CSW+ + +IH F VGD HP+T IY L F G
Sbjct: 609 AAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEFDG 661
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 113/465 (24%), Positives = 197/465 (42%), Gaps = 70/465 (15%)
Query: 106 DALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS 165
+A + EM A + + ++ C +L ++ GR LH M + S +
Sbjct: 66 EAFEFLQEMDKAG--VSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNC 123
Query: 166 LIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAV 225
++ MY +CR E+A ++F+ EM+ ELN AV
Sbjct: 124 VLQMYCECRSLEDADKLFD------------------------EMS--------ELN-AV 150
Query: 226 SWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWV 285
S T+IS Y + G ++ + LF M +G + + + L + R + ++IH+ V
Sbjct: 151 SRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHV 210
Query: 286 LKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEAR 345
++ GL SN + +GIV++Y KC G + A+
Sbjct: 211 IRAGLCSNTSIETGIVNMYVKC-------------------------------GWLVGAK 239
Query: 346 RHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQ 405
R FD + K V T L GY +A L + VT EGV D+ + ++L ACA
Sbjct: 240 RVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVT-EGVEWDSFVFSVVLKACASL 298
Query: 406 AALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMI 465
L+ GK+IHA + ++G++ + + + LVD Y KC + A FQ E + V ++ +I
Sbjct: 299 EELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAII 358
Query: 466 ACYAHHGHEEKAILLFEEMLEKGIKP-DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYK 524
+ Y E+A+ F+ + K ++ T+ +I A +G +
Sbjct: 359 SGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSL 418
Query: 525 ISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLN 569
I + A +I +Y + L+ A E +S+ D V +F++
Sbjct: 419 IGSQYGESA-LITMYSKCGCLDDANEVFESM-DNPDIVAWTAFIS 461
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 146/408 (35%), Positives = 241/408 (59%), Gaps = 1/408 (0%)
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA 313
GV+ N+ T ++ + AC + +++ K+ H++++K G S+ V + +V +Y +C ++ A
Sbjct: 5 GVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDA 64
Query: 314 ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE 373
+ R++ + ++MI G++ +M++A + F ++E++VV WTA+ +GY + +
Sbjct: 65 GHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGD 124
Query: 374 ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL 433
++ ++ + K G+ +D I+ +L ACA AAL G++ HAY+++ G +D + S L
Sbjct: 125 ESLNVFNQ-MRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSAL 183
Query: 434 VDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDA 493
VDMY+K G+M A +F +R+ V +N +I A HG A+LLFE+ML+ GIKP+
Sbjct: 184 VDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNE 243
Query: 494 VTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMK 553
++FV +LSA H G V G YFN MT +Y I P+ HY CMIDL GRA L++A F+
Sbjct: 244 ISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFIN 303
Query: 554 SIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAE 613
+P E D + G+ L CR++ N ELA E LL +E YV L+N+YAA G W +
Sbjct: 304 GMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQWDD 363
Query: 614 MGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
++RK M+ + G SW+ V+ +H F G+ SHP+ I+ L
Sbjct: 364 AAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFL 411
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 175/349 (50%), Gaps = 48/349 (13%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L++ H IK G + L+H+Y++ L ++ +FD+M ER+ +WN +I+
Sbjct: 25 SLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHVFDKMSERSTRTWNAMIT 84
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
++ D+K+A LF +D+V++ +++ GY GY ++L +F +M+ ++ D
Sbjct: 85 GHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQ-NGYGDESLNVFNQMRKTG--MKSD 141
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV-----SSLIDMYSKCRCYEEA 179
F + S L+ C L + GRQ HA++V+ SGFA+ S+L+DMY+K E+A
Sbjct: 142 RFIMGSVLSACADLAALELGRQFHAYVVQ-----SGFALDIVVGSALVDMYAKSGSMEDA 196
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
C+VF+ + P+ N+ VSWN++I+G Q+G
Sbjct: 197 CQVFD--------------------------------KMPQRNE-VSWNSIITGCAQHGR 223
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKN-GLISNPFVSS 298
+ + LF +M + G++ NE +F LSAC V + + + +N G++ + +
Sbjct: 224 GNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYT 283
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGY-SLQGNMEEARR 346
++D+ + ++ AE+ + V S+ ++G + GN E A+R
Sbjct: 284 CMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLGACRIHGNTELAKR 332
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 183/368 (49%), Gaps = 38/368 (10%)
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
++ ++FT+++ + C + ++ G+Q H +++K ++ ++L+ MY++C E+A
Sbjct: 6 VKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAG 65
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
VF+ +E + + NAM+ + +M+ ALK F+ E D VSW +I+GY QNG
Sbjct: 66 HVFDKMSER-STRTWNAMITGHAQNRDMKKALKLFYEMSE-RDVVSWTAVIAGYAQNGYG 123
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
+E L +F +M + G++ + S LSAC L ++ ++ H++V+++G + V S +
Sbjct: 124 DESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSAL 183
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
VD+Y K G+ME+A + FD + ++N V W
Sbjct: 184 VDMYAK-------------------------------SGSMEDACQVFDKMPQRNEVSWN 212
Query: 361 ALFSGYVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
++ +G + + +A+ LL E + + G+ + + V +L AC+ ++ G+ +
Sbjct: 213 SIITGCAQHGRGNDAV--LLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMT 270
Query: 420 R-MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKA 477
+ G+ D + ++D+ + G + AE +E D+ ++ ++ HG+ E A
Sbjct: 271 QNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLGACRIHGNTELA 330
Query: 478 ILLFEEML 485
+ E +L
Sbjct: 331 KRIAEHLL 338
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 103/217 (47%), Gaps = 33/217 (15%)
Query: 386 EGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCG---- 441
+GV + L ++ ACA A+L GK+ H YI++MG + D + + LV MY++CG
Sbjct: 4 KGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLED 63
Query: 442 ---------------------------NMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
+M A +F ERD+V + +IA YA +G+
Sbjct: 64 AGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYG 123
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC 534
++++ +F +M + G+K D ++LSA ++E+G + F++ + + +
Sbjct: 124 DESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQ-FHAYVVQSGFALDIVVGSA 182
Query: 535 MIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVC 571
++D+Y ++ +E A + +P + + V S + C
Sbjct: 183 LVDMYAKSGSMEDACQVFDKMP-QRNEVSWNSIITGC 218
>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
Length = 1058
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 203/662 (30%), Positives = 310/662 (46%), Gaps = 106/662 (16%)
Query: 6 LKEALICHVQAIKAGLT-LTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
L+ + H ++ GLT L +N L+++Y+K + + K+F M + SWNTIIS
Sbjct: 395 LRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIIS 454
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
A ++ + ++A V + S++ QS I
Sbjct: 455 ALDQNGNCEEA------------VMHYSLM-------------------RQSC---ISPS 480
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
F + S+L+ C L + G+Q+H VK D + L+ MY +C + +VF
Sbjct: 481 NFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFN 540
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA-EEG 243
E +D VSWNT++ + E
Sbjct: 541 SMAE---------------------------------HDEVSWNTMMGVMASSQTPISEI 567
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
+K+F M G+ N+ TF + L+A L ++ K++H+ V+K+G++ + V + ++
Sbjct: 568 VKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALISC 627
Query: 304 YCKCENMNYAESMLL-LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
Y K +M E + + R++ S +SMI GY GN L E VW +
Sbjct: 628 YAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGN----------LQEAMDCVWLMI 677
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
SG + D I+L ACA AAL G E+HA+ +R
Sbjct: 678 HSGQI----------------------MDCCTFSIILNACASVAALERGMELHAFGIRSH 715
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
++ D + S LVDMYSKCG + YA +F + +R+ +N MI+ YA HG KAI +FE
Sbjct: 716 LESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFE 775
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRA 542
EML PD VTFV++LSA H G VE G +YF M D+ I P+ +HY+C+IDL GRA
Sbjct: 776 EMLRSRESPDHVTFVSVLSACSHAGLVERGLEYFE-MMPDHGILPQIEHYSCVIDLLGRA 834
Query: 543 NQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNR---NAELAGEAEEKLLRLEGNNKARYV 599
+++K E+++ +P E +A+I + L CR ++ N +L EA LL +E N YV
Sbjct: 835 GKIDKIKEYIQRMPIEPNALIWRTVLVACRQSKDGSNIDLGREASRVLLEIEPQNPVNYV 894
Query: 600 QLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYS 659
+N +AA G W + + R MR + AG SWV + +H F GD SHP T IY
Sbjct: 895 LASNFHAATGMWEDTAKARTAMRQATEKKEAGRSWVTLNDGVHTFIAGDRSHPNTKEIYE 954
Query: 660 VL 661
L
Sbjct: 955 KL 956
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 130/506 (25%), Positives = 203/506 (40%), Gaps = 115/506 (22%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
HV+ IK GL N L++ Y+K L + ++FDEMPERN SW ++S
Sbjct: 84 HVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVS-------- 135
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM-QSADEHIRMDEFTVTST 131
GY+ G +A ++F M + R FT +
Sbjct: 136 -----------------------GYV-LHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTL 171
Query: 132 LNLCVK--LLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEE--ACRVFEGCT 187
L C +GF Q+H + KT ++ ++LI MY C A RVF+G
Sbjct: 172 LRACQDGGPDRLGFAVQVHGLVSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGT- 230
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
+ D ++WN L+S Y + GD LF
Sbjct: 231 --------------------------------PIRDLITWNALMSVYAKKGDVASTFTLF 258
Query: 248 VRM--GENGV--RWNEHTFASALSACCGLRNVKCA-KEIHSWVLKNGLISNPFVSSGIVD 302
M G++ + R EHTF S ++A ++ WVLK+G S+ +V S +V
Sbjct: 259 KDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVS 318
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
+ + G +EA+ F SL +KN V L
Sbjct: 319 AFAR-------------------------------HGLTDEAKDIFLSLKQKNAVTLNGL 347
Query: 363 FSGYVKAQNCEALFDLLSEFV-TKEGVVTDALILVILLGACA----LQAALHPGKEIHAY 417
G V+ E + FV T+ V +A V+LL A A + L G+ +H +
Sbjct: 348 IVGLVRQDFSEEAVKI---FVGTRNTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGH 404
Query: 418 ILRMGVQMDKKLIST-LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
+LR G+ K +S LV+MY+KCG + A IFQ D + +N +I+ +G+ E+
Sbjct: 405 MLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEE 464
Query: 477 AILLFEEMLEKGIKPDAVTFVAILSA 502
A++ + M + I P ++ LS+
Sbjct: 465 AVMHYSLMRQSCISPSNFALISSLSS 490
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 157/386 (40%), Gaps = 63/386 (16%)
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
C VN +K A +AA A + F PE N AVSW L+SGYV +G AEE +
Sbjct: 99 CNHLVNSYAKGARLAA---------ASQVFDEMPERN-AVSWTCLVSGYVLHGIAEEAFR 148
Query: 246 LF---VRMGENGVRWNEHTFASALSAC--CGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
+F +R + G R TF + L AC G + A ++H V K SN V + +
Sbjct: 149 VFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNTTVCNAL 208
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
+ +Y C ++ I+ A+R FD ++++ W
Sbjct: 209 ISMYGSC-------------------TVGPPIL----------AQRVFDGTPIRDLITWN 239
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVV----TDALILVILLGACALQAALHPGKEIHA 416
AL S Y K + + F L + + + T+ ++ A + ++
Sbjct: 240 ALMSVYAKKGDVASTFTLFKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLV 299
Query: 417 YILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
++L+ G D + S LV +++ G A+ IF + +++ V N +I E+
Sbjct: 300 WVLKSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEE 359
Query: 477 AILLFEEMLEKGIKPDAVTFVAILSAFR---------HCGSVEMGEKYFNSMTADYKISP 527
A+ +F + +A T+V +LSA G V G +T D KI+
Sbjct: 360 AVKIFVGT-RNTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLT-DLKIAV 417
Query: 528 ETDHYACMIDLYGRANQLEKAIEFMK 553
++++Y + +E A + +
Sbjct: 418 SNG----LVNMYAKCGAIESASKIFQ 439
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
+ +H +++ G+ D L + LV+ Y+K + A +F ER+ V + +++ Y H
Sbjct: 81 ENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLH 140
Query: 472 GHEEKAILLFEEML---EKGIKPDAVTFVAILSAFRHCGSVEMG 512
G E+A +F ML + G +P + TF +L A + G +G
Sbjct: 141 GIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLG 184
>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15510, chloroplastic; Flags: Precursor
gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 866
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 187/619 (30%), Positives = 310/619 (50%), Gaps = 83/619 (13%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N +I+ +K D+K AR LFD P +D++++N+M+ GY G + L+LF M+
Sbjct: 235 NALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFE-NGMCHEGLELFFAMRGLS- 292
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV-----SSLIDMYSKCR 174
+ D T+TS ++ C L + GR +HA+++ T GFAV +SL MY
Sbjct: 293 -VDPDLMTLTSVISACELLGDRRLGRDIHAYVITT-----GFAVDISVCNSLTQMYLNAG 346
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
+ EA ++F + E D VSW T+ISGY
Sbjct: 347 SWREAEKLFS---------------------------------RMERKDIVSWTTMISGY 373
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
N ++ + + M ++ V+ +E T A+ LSAC L ++ E+H +K LIS
Sbjct: 374 EYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYV 433
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
V++ ++++Y KC+ ++ A + F ++ K
Sbjct: 434 IVANNLINMYSKCKCIDKALDI-------------------------------FHNIPRK 462
Query: 355 NVVVWTALFSGYVKAQNC-EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
NV+ WT++ +G C EAL L +T + +A+ L L ACA AL GKE
Sbjct: 463 NVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQ---PNAITLTAALAACARIGALMCGKE 519
Query: 414 IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH 473
IHA++LR GV +D L + L+DMY +CG M A F N ++D+ +N+++ Y+ G
Sbjct: 520 IHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQF-NSQKKDVTSWNILLTGYSERGQ 578
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA 533
+ LF+ M++ ++PD +TF+++L V G YF+ M DY ++P HYA
Sbjct: 579 GSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKME-DYGVTPNLKHYA 637
Query: 534 CMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGN 593
C++DL GRA +L++A +F++ +P D + G+ LN CR++ +L + + + L+
Sbjct: 638 CVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKK 697
Query: 594 NKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPK 653
+ Y+ L N+YA G W E+ ++R+ M+ AGCSWV V+ ++H F D HP+
Sbjct: 698 SVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQ 757
Query: 654 TNAIYSVLAIFTGELYEIA 672
T I +VL F ++ E+
Sbjct: 758 TKEINTVLEGFYEKMSEVG 776
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 122/528 (23%), Positives = 206/528 (39%), Gaps = 136/528 (25%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
HV ++ G L N LI +Y K ++ +R LFD MP R++ SWN +IS ++
Sbjct: 219 HVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMC 278
Query: 73 KQARSLFDS----SPHKDLVTYNSMLC---------------GYINAEGYEAD------- 106
+ LF + S DL+T S++ Y+ G+ D
Sbjct: 279 HEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSL 338
Query: 107 ------------ALKLFIEMQSAD-----------------------------EHIRMDE 125
A KLF M+ D + ++ DE
Sbjct: 339 TQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDE 398
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
TV + L+ C L ++ G +LH +K + ++LI+MYSKC+C ++A +F
Sbjct: 399 ITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFH- 457
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
N+ KN +SW ++I+G N E L
Sbjct: 458 -----NIPRKN---------------------------VISWTSIIAGLRLNNRCFEAL- 484
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
+F+R + ++ N T +AL+AC + + C KEIH+ VL+ G+ + F+ + ++D+Y
Sbjct: 485 IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYV 544
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
+C MN A S F+S +K+V W L +G
Sbjct: 545 RCGRMNTAWS-------------------------------QFNS-QKKDVTSWNILLTG 572
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
Y + + +L V K V D + + LL C+ + G + + GV
Sbjct: 573 YSERGQGSMVVELFDRMV-KSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTP 631
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMI-ACYAHH 471
+ K + +VD+ + G + A Q + D ++ ++ AC HH
Sbjct: 632 NLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHH 679
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 121/283 (42%), Gaps = 31/283 (10%)
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL 290
+ G NG EE +KL M E V +E F + + C R + +++S L
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIAL---- 121
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
SM L GV + +M V + GN+ +A F
Sbjct: 122 -----------------------SSMSSL-GVELGNAFLAMFVRF---GNLVDAWYVFGK 154
Query: 351 LTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHP 410
++E+N+ W L GY K + L + GV D +L C L
Sbjct: 155 MSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLAR 214
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
GKE+H +++R G ++D +++ L+ MY KCG++ A ++F RD++ +N MI+ Y
Sbjct: 215 GKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFE 274
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
+G + + LF M + PD +T +++SA G +G
Sbjct: 275 NGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGR 317
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 86/189 (45%), Gaps = 10/189 (5%)
Query: 388 VVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAE 447
V D + V L+ C + A G ++++ L + +L + + M+ + GN+ A
Sbjct: 90 VAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAW 149
Query: 448 IIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE-KGIKPDAVTFVAILSAFRHC 506
+F ER+L +NV++ YA G+ ++A+ L+ ML G+KPD TF +L R C
Sbjct: 150 YVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVL---RTC 206
Query: 507 GSVE--MGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE----D 560
G + K + Y + D +I +Y + ++ A +P + +
Sbjct: 207 GGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWN 266
Query: 561 AVILGSFLN 569
A+I G F N
Sbjct: 267 AMISGYFEN 275
>gi|125571373|gb|EAZ12888.1| hypothetical protein OsJ_02809 [Oryza sativa Japonica Group]
Length = 669
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 189/617 (30%), Positives = 301/617 (48%), Gaps = 105/617 (17%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + G T + L++ Y + E+ K+F+EM ER+V SW ++ISAC +
Sbjct: 144 HALVRRIGFTSDVFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSWTSMISACAQ---- 199
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
CG+ + LK+ EMQ+ E I ++ T+ S L
Sbjct: 200 ----------------------CGHWD------KVLKMLSEMQA--EGIIPNKVTIISLL 229
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C + V GR ++ + K +A ++LI MY+KC C +A F+
Sbjct: 230 SACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGCLSDALEAFQ-------- 281
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
AM A + SWNTLI G+VQN + +E L++F M
Sbjct: 282 ----AMPARYTK---------------------SWNTLIDGFVQNHEHKEALRIFEEMLL 316
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+GV + T S LSAC L ++ +HS++ NG+ + +++ ++++Y KC
Sbjct: 317 HGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKC----- 371
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G+M A R F ++T+K+VV WT + GYVK
Sbjct: 372 --------------------------GDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQF 405
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
F+L E E VV + LV LL AC+ AL G+EIH+YI M V D L S
Sbjct: 406 TMAFNLFEEMKIAE-VVAHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCLESA 464
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE-KGIKP 491
LVDMY+KCG + A IF+ + + +N MI A +G+ ++A+ LF++MLE + KP
Sbjct: 465 LVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKP 524
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
D +T A+L A H G V+ G +YF M++ + P+T+HY C++DL GRA L++A F
Sbjct: 525 DGITLKAVLGACAHVGMVDEGLRYFYLMSS-LGVVPDTEHYGCIVDLLGRAGMLDEAFHF 583
Query: 552 MKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNW 611
+K +P E + VI GS L CR++ +L + ++ + N+ +V ++N++A E W
Sbjct: 584 IKKMPIEPNPVIWGSLLAACRVHHRMDLGKVIGQHIVNVAPNDVGVHVLVSNLHAEESQW 643
Query: 612 AEMGRIRKQMRGMKGNR 628
++ + +RG+ G+R
Sbjct: 644 DDV----EHVRGLMGSR 656
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/502 (23%), Positives = 218/502 (43%), Gaps = 72/502 (14%)
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
++++ HD++ AR +FD + +N M+ GY + E DAL +F EM+
Sbjct: 57 ALLASPAARHDMRYARKVFDGMAQPNAFVWNCMIRGYSSCEA-PRDALAVFREMRR--RG 113
Query: 121 IRMDEFTVTSTLNLCVKLLNVGF---GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYE 177
+ D +T+ + ++ + + G +HA + + + F +S L++ Y R E
Sbjct: 114 VSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVE 173
Query: 178 EACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQN 237
EA +VFE E D VSW ++IS Q
Sbjct: 174 EASKVFEEMYER---------------------------------DVVSWTSMISACAQC 200
Query: 238 GDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVS 297
G ++ LK+ M G+ N+ T S LSAC + V + +++ V K G+ ++ +
Sbjct: 201 GHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIR 260
Query: 298 SGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVV 357
+ ++ +Y KC G + +A F ++ +
Sbjct: 261 NALISMYTKC-------------------------------GCLSDALEAFQAMPARYTK 289
Query: 358 VWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
W L G+V+ + + E + GV D + LV +L ACA L G +H+Y
Sbjct: 290 SWNTLIDGFVQNHEHKEALRIFEEMLL-HGVTPDGITLVSVLSACAQLGELRKGMHVHSY 348
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
I G+ D L ++L++MY+KCG+M AE +FQ ++D+V + VM+ Y A
Sbjct: 349 IKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMA 408
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID 537
LFEEM + + V++LSA G+++ G + +S + ++ + + ++D
Sbjct: 409 FNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGRE-IHSYIEEMNVAKDLCLESALVD 467
Query: 538 LYGRANQLEKAIEFMKSIPTEE 559
+Y + ++ A E + + ++
Sbjct: 468 MYAKCGCIDTASEIFRKMQHKQ 489
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 112/255 (43%), Gaps = 41/255 (16%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L++ + H G+ I TN LI++Y+K + + ++F M +++V SW ++
Sbjct: 339 LRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCG 398
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
+K H A +LF+ EM+ A+ + E
Sbjct: 399 YVKGHQFTMAFNLFE--------------------------------EMKIAE--VVAHE 424
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV-SSLIDMYSKCRCYEEACRVFE 184
+ S L+ C +L + GR++H++ ++ N A + S+L+DMY+KC C + A +F
Sbjct: 425 MALVSLLSACSQLGALDKGREIHSY-IEEMNVAKDLCLESALVDMYAKCGCIDTASEIFR 483
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN----DAVSWNTLISGYVQNGDA 240
+ L S NAM+ G + A++ F + EL D ++ ++ G
Sbjct: 484 KMQHKQTL-SWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMV 542
Query: 241 EEGLKLFVRMGENGV 255
+EGL+ F M GV
Sbjct: 543 DEGLRYFYLMSSLGV 557
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
Query: 395 LVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCG---NMTYAEIIFQ 451
L+ L ACA +A L E+H ++R + D + L+ + + +M YA +F
Sbjct: 20 LLAYLDACASRAHL---AELHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFD 76
Query: 452 NFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTF 496
+ + ++N MI Y+ A+ +F EM +G+ PD T
Sbjct: 77 GMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTM 121
>gi|449527015|ref|XP_004170508.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Cucumis sativus]
Length = 710
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 196/698 (28%), Positives = 337/698 (48%), Gaps = 81/698 (11%)
Query: 37 KHNLLRESRKLFDEMPE------RNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTY 90
KHN + +LF + E N+ S N IS ++ L A++LF+ P + +V++
Sbjct: 12 KHNRWKACLELFSTLCEGLHTENSNIISTNIYISRHVRDGHLDLAQTLFNEMPVRSVVSW 71
Query: 91 NSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAF 150
N M+ GY + G ++AL L EM +++++E T +S L++C G+Q H
Sbjct: 72 NIMISGY-SKFGKYSEALNLASEMHC--NNVKLNETTFSSLLSICAHSGCSSEGKQFHCL 128
Query: 151 MVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEM 210
++K+ S+L+ Y+ A +VF+ ++ +L+ + ++ + M+
Sbjct: 129 VLKSGLQIFERVGSALVYFYANINDISGAKQVFDELHDKNDLL-WDLLLVGYVKCNLMDD 187
Query: 211 ALKTFWRQPELNDAVSWNTLISGYVQN-GDAEEGLKLFVRMGENG-VRWNEHTFASALSA 268
AL F + P D V+W T+IS Y ++ + + GL+LF M NG V NE TF S + A
Sbjct: 188 ALDLFMKIPT-RDVVAWTTMISAYARSEHNCKRGLELFCSMRMNGEVEPNEFTFDSVVRA 246
Query: 269 CCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESML----------- 317
C +R + K +H + K G + V S ++ YC+CE ++ A+++
Sbjct: 247 CGRMRYLSWGKVVHGILTKYGFHFDHSVCSALILFYCQCEAIDSAKAVYDSMERPCLKAS 306
Query: 318 --LLKGV------------------RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNV- 356
LL+G+ +N S + M+ GY+ G +E ++R F+ +T K
Sbjct: 307 NSLLEGLIFAGRINDAEEIFCKLREKNPVSYNLMLKGYATSGRIEGSKRLFERMTHKTTS 366
Query: 357 -------------------------------VVWTALFSGYVKAQNCEALFDLLSEFVT- 384
V W ++ SGY++ E L ++T
Sbjct: 367 SLNTMISVYSRNGEIDKAFKLFESVKSEGDPVTWNSMISGYIQNHQHEGALKL---YITM 423
Query: 385 -KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNM 443
+ V L AC + G+ +H + +R + + ++L+DMY+KCG++
Sbjct: 424 CRTSVERSRSTFSALFQACTCLEYIQLGQALHVHAIREAFDSNVYVGTSLIDMYAKCGSI 483
Query: 444 TYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAF 503
A+ F + ++ + +I Y HHG +A +F+EML+ + P+ T + ILSA
Sbjct: 484 YDAQTSFASVCLPNVAAFTALINGYVHHGLGIEAFSVFDEMLKHKVPPNGATLLGILSAC 543
Query: 504 RHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVI 563
G V+ G F+SM Y + P +HYAC++DL GR+ +L +A F++ +P E D VI
Sbjct: 544 SCAGMVKEGMTVFHSMEKCYGVIPTLEHYACVVDLLGRSGRLYEAEAFIRCMPIEADRVI 603
Query: 564 LGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRG 623
G+ LN C + EL +K+L L+ + Y+ L+N+YA G W E +R+++
Sbjct: 604 WGALLNACWFWMDLELGESVAKKVLSLDPKAISAYIILSNIYAKLGKWVEKINVRRKLMS 663
Query: 624 MKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+K + GCSW+ V ++ +F+ GD SHP NAIYS L
Sbjct: 664 LKVKKIRGCSWIDVNNKTCVFSAGDRSHPNCNAIYSTL 701
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 126/555 (22%), Positives = 228/555 (41%), Gaps = 104/555 (18%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K+GL + + L++ Y+ N + ++++FDE+ ++N W+ ++ +K + +
Sbjct: 126 HCLVLKSGLQIFERVGSALVYFYANINDISGAKQVFDELHDKNDLLWDLLLVGYVKCNLM 185
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
A LF P +D+V + +M+ Y +E L+LF M+ E + +EFT S +
Sbjct: 186 DDALDLFMKIPTRDVVAWTTMISAYARSEHNCKRGLELFCSMRMNGE-VEPNEFTFDSVV 244
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG----CTE 188
C ++ + +G+ +H + K S+LI Y +C + A V++ C +
Sbjct: 245 RACGRMRYLSWGKVVHGILTKYGFHFDHSVCSALILFYCQCEAIDSAKAVYDSMERPCLK 304
Query: 189 --------------------------EVNLISKNAMVAACCREG---------------- 206
E N +S N M+ G
Sbjct: 305 ASNSLLEGLIFAGRINDAEEIFCKLREKNPVSYNLMLKGYATSGRIEGSKRLFERMTHKT 364
Query: 207 ---------------EMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
E++ A K F D V+WN++ISGY+QN E LKL++ M
Sbjct: 365 TSSLNTMISVYSRNGEIDKAFKLFESVKSEGDPVTWNSMISGYIQNHQHEGALKLYITMC 424
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
V + TF++ AC L ++ + +H ++ SN +V + ++D+Y KC
Sbjct: 425 RTSVERSRSTFSALFQACTCLEYIQLGQALHVHAIREAFDSNVYVGTSLIDMYAKC---- 480
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
G++ +A+ F S+ NV +TAL +GYV
Sbjct: 481 ---------------------------GSIYDAQTSFASVCLPNVAAFTALINGYVHHGL 513
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI-HAYILRMGVQMDKKLI 430
F + E + K V + L+ +L AC+ + G + H+ GV +
Sbjct: 514 GIEAFSVFDEML-KHKVPPNGATLLGILSACSCAGMVKEGMTVFHSMEKCYGVIPTLEHY 572
Query: 431 STLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMI-ACYAHHGHEEKAILLFEEMLEK- 487
+ +VD+ + G + AE + IE D V++ ++ AC+ E L E + +K
Sbjct: 573 ACVVDLLGRSGRLYEAEAFIRCMPIEADRVIWGALLNACWFWMDLE-----LGESVAKKV 627
Query: 488 -GIKPDAVTFVAILS 501
+ P A++ ILS
Sbjct: 628 LSLDPKAISAYIILS 642
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 178/639 (27%), Positives = 312/639 (48%), Gaps = 79/639 (12%)
Query: 41 LRESRKLFDEMPERNVFSWNT-------IISACIKSHDLKQARSLFDSSPHKDLVTYNSM 93
L + +K+ M E W+T I+S K ++ A +FD +++V++ +M
Sbjct: 328 LEQGKKVHARMKE---VGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAM 384
Query: 94 LCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVK 153
+ G+ G +A F +M + I + T S L C + G+Q+ +++
Sbjct: 385 IAGFAQ-HGRIDEAFLFFNKM--IESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIE 441
Query: 154 TSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALK 213
+ ++L+ MY+KC ++A RVFE ISK +VA
Sbjct: 442 AGYGSDDRVRTALLSMYAKCGSLKDAHRVFEK-------ISKQNVVA------------- 481
Query: 214 TFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLR 273
WN +I+ YVQ+ + L F + + G++ N TF S L+ C
Sbjct: 482 -------------WNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSD 528
Query: 274 NVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIV 333
+++ K +H ++K GL S+ VS+ +V ++ C
Sbjct: 529 SLELGKWVHFLIMKAGLESDLHVSNALVSMFVNC-------------------------- 562
Query: 334 GYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDAL 393
G++ A+ F+ + ++++V W + +G+V+ + FD + + + G+ D +
Sbjct: 563 -----GDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYF-KMMQESGIKPDKI 616
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF 453
LL ACA AL G+ +HA I D + + L+ MY+KCG++ A +F
Sbjct: 617 TFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKL 676
Query: 454 IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
++++ + MI YA HG ++A+ LF +M ++G+KPD +TFV LSA H G +E G
Sbjct: 677 PKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGL 736
Query: 514 KYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRL 573
+F SM ++ I P +HY CM+DL+GRA L +A+EF+ + E D+ + G+ L C++
Sbjct: 737 HHFQSMK-EFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQV 795
Query: 574 NRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCS 633
+ N ELA +A +K L L+ N+ +V L+N+YAA G W E+ ++RK M + G S
Sbjct: 796 HLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQS 855
Query: 634 WVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
W+ V+ ++H F D +HP+T I++ L E+ ++
Sbjct: 856 WIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLG 894
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 129/492 (26%), Positives = 238/492 (48%), Gaps = 74/492 (15%)
Query: 27 TTNQLIHIYSKHNLLRESRKLFDEMP----ERNVFSWNTIISACIKSHDLKQARSLFDSS 82
T + L+ + K L + ++++ + + ++F WNT+I+ K + A+ +FD
Sbjct: 112 TYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDM 171
Query: 83 PHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVG 142
KD+ ++N +L GY+ YE +A KL +M + ++ D+ T S LN C NV
Sbjct: 172 REKDVYSWNLLLGGYVQHGLYE-EAFKLHEQM--VQDSVKPDKRTFVSMLNACADARNVD 228
Query: 143 FGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAAC 202
GR+L+ ++K D F ++LI+M+ KC +A +VF+ +L++ +M+
Sbjct: 229 KGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTR-DLVTWTSMITGL 287
Query: 203 CREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTF 262
R G + A LF RM E GV+ ++ F
Sbjct: 288 ARHGRFKQA--------------------------------CNLFQRMEEEGVQPDKVAF 315
Query: 263 ASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA-ESMLLLKG 321
S L AC ++ K++H+ + + G + +V + I+ +Y KC +M A E L+KG
Sbjct: 316 VSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKG 375
Query: 322 VRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSE 381
RN S ++MI G++ G ++EA F+ + E
Sbjct: 376 -RNVVSWTAMIAGFAQHGRIDEAFLFFNKMIE---------------------------- 406
Query: 382 FVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
G+ + + + +LGAC+ +AL G++I +I+ G D ++ + L+ MY+KCG
Sbjct: 407 ----SGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCG 462
Query: 442 NMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
++ A +F+ ++++V +N MI Y H + A+ F+ +L++GIKP++ TF +IL+
Sbjct: 463 SLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILN 522
Query: 502 AFRHCGSVEMGE 513
+ S+E+G+
Sbjct: 523 VCKSSDSLELGK 534
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 138/538 (25%), Positives = 247/538 (45%), Gaps = 119/538 (22%)
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
KD N++L ++ G +A+++ + S+ HI++ T ++ L LC+K N+G G
Sbjct: 73 KDTQKANAVL-NRLSKAGQFNEAMQVLERVDSS--HIQIYRQTYSALLQLCIKFKNLGDG 129
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
+++ + K+ F ++LI+MY+KC A ++F+ E+
Sbjct: 130 ERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREK--------------- 174
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFAS 264
D SWN L+ GYVQ+G EE KL +M ++ V+ ++ TF S
Sbjct: 175 ------------------DVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVS 216
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
L+AC RNV +E+++ +LK G ++ FV + +++++ KC
Sbjct: 217 MLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKC----------------- 259
Query: 325 SFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK----AQNCEALFDLLS 380
G++ +A + FD+L +++V WT++ +G + Q C LF +
Sbjct: 260 --------------GDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACN-LFQRME 304
Query: 381 EFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC 440
E EGV D + V LL AC AL GK++HA + +G + + + ++ MY+KC
Sbjct: 305 E----EGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKC 360
Query: 441 GNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAIL 500
G+M A +F R++V + MIA +A HG ++A L F +M+E GI+P+ VTF++IL
Sbjct: 361 GSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSIL 420
Query: 501 SA-----------------------------------FRHCGSVEMGEKYFNSMTADYKI 525
A + CGS++ + F ++ +
Sbjct: 421 GACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVV 480
Query: 526 SPETDHYACMIDLYGRANQLEKAIEFMKSIPTE---EDAVILGSFLNVCRLNRNAELA 580
+ + MI Y + Q + A+ +++ E ++ S LNVC+ + + EL
Sbjct: 481 A-----WNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELG 533
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 162/333 (48%), Gaps = 37/333 (11%)
Query: 220 ELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAK 279
++ D N +++ + G E +++ R+ + ++ T+++ L C +N+ +
Sbjct: 71 DIKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGE 130
Query: 280 EIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQG 339
I++ + K+G+ + F+ + ++++Y KC G
Sbjct: 131 RIYNHIKKSGVQPDIFMWNTLINMYAKC-------------------------------G 159
Query: 340 NMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILL 399
N A++ FD + EK+V W L GYV+ E F L + V ++ V D V +L
Sbjct: 160 NTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMV-QDSVKPDKRTFVSML 218
Query: 400 GACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLV 459
ACA + G+E++ IL+ G D + + L++M+ KCG++ A +F N RDLV
Sbjct: 219 NACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLV 278
Query: 460 LYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSM 519
+ MI A HG ++A LF+ M E+G++PD V FV++L A H ++E G+K M
Sbjct: 279 TWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARM 338
Query: 520 TADYKISPETDHY--ACMIDLYGRANQLEKAIE 550
++ +T+ Y ++ +Y + +E A+E
Sbjct: 339 K---EVGWDTEIYVGTAILSMYTKCGSMEDALE 368
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 116/277 (41%), Gaps = 74/277 (26%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +KAGL +N L+ ++ L ++ LF++MP+R++ SWNTII+ ++
Sbjct: 537 HFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQ---- 592
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
G A F MQ + I+ D+ T T L
Sbjct: 593 ----------------------------HGKNQVAFDYFKMMQESG--IKPDKITFTGLL 622
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
N C + GR+LHA + + + D + LI MY+KC E+A +VF
Sbjct: 623 NACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFH-------- 674
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+ P+ N SW ++I+GY Q+G +E L+LF +M +
Sbjct: 675 ------------------------KLPKKN-VYSWTSMITGYAQHGRGKEALELFYQMQQ 709
Query: 253 NGVRWNEHTFASALSACC-------GLRNVKCAKEIH 282
GV+ + TF ALSAC GL + + KE +
Sbjct: 710 EGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKEFN 746
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 100/256 (39%), Gaps = 44/256 (17%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L E H +A + LI +Y+K + ++ ++F ++P++NV+SW
Sbjct: 631 LTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSW------ 684
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
SM+ GY G +AL+LF +MQ E ++ D
Sbjct: 685 -------------------------TSMITGYAQ-HGRGKEALELFYQMQQ--EGVKPDW 716
Query: 126 FTVTSTLNLCVK--LLNVGFG--RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
T L+ C L+ G + + F ++ + G ++D++ + EA
Sbjct: 717 ITFVGALSACAHAGLIEEGLHHFQSMKEFNIEPRMEHYG----CMVDLFGRAGLLNEAVE 772
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPEL--NDAVSWNTLISGYVQNGD 239
E + A++ AC +E+A K ++ EL ND + L + Y G
Sbjct: 773 FIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGM 832
Query: 240 AEEGLKLFVRMGENGV 255
+E K+ M + GV
Sbjct: 833 WKEVAKMRKVMLDRGV 848
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 175/606 (28%), Positives = 300/606 (49%), Gaps = 79/606 (13%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N++++ K+ + A F +SP DL+++N+M+ Y E +A+ F ++ +
Sbjct: 933 NSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQ-NNLEMEAICTFRDLLR--D 989
Query: 120 HIRMDEFTVTSTLNLCVKLLNVG-------FGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
++ D+FT+ S L C + G G Q+H + +K F ++LID+YSK
Sbjct: 990 GLKPDQFTLASVLRAC----STGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSK 1045
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
+EA + G + D SWN ++
Sbjct: 1046 GGKMDEAEFLLHGKYD---------------------------------FDLASWNAIMF 1072
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
GY+++ + + L+ F M E G+ +E T A+A+ A L N+K K+I ++ +K G +
Sbjct: 1073 GYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNN 1132
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
+ +VSSG++D+Y KC G+M A F ++
Sbjct: 1133 DLWVSSGVLDMYIKC-------------------------------GDMPNALELFGEIS 1161
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
+ V WT + SGY++ + + + + GV D L+ A + AL GK
Sbjct: 1162 RPDEVAWTTMISGYIENGDEDHALSVY-HLMRVSGVQPDEYTFATLIKASSCLTALEQGK 1220
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
+IHA ++++ +D + ++LVDMY KCG++ A +F+ R +V +N M+ A HG
Sbjct: 1221 QIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHG 1280
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
H ++A+ LF M GI+PD VTF+ +LSA H G KYF++M Y I+PE +HY
Sbjct: 1281 HVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHY 1340
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
+C++D GRA ++++A + S+P + A + + L CR +AE A +KLL L+
Sbjct: 1341 SCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDP 1400
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
++ + YV L+N+YAA W ++ R M+ + G SW+ V++++H+F V D SHP
Sbjct: 1401 SDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHP 1460
Query: 653 KTNAIY 658
+ + IY
Sbjct: 1461 QASLIY 1466
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 149/606 (24%), Positives = 264/606 (43%), Gaps = 123/606 (20%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A+K G L + L++IY K+ L+ ++R LFD+MPER+ WN ++ A +++
Sbjct: 740 HGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQ 799
Query: 73 KQARSLFDSSPHKD--LVTYNSMLC--GYIN----------AEGYEADALKLFIEMQSAD 118
+A F S+ H+ ++++ C G +N AE +A A+K+F Q ++
Sbjct: 800 DEALRFF-SAFHRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSN 858
Query: 119 -----------------------------EHIRMDEFTVTSTLNLCVKLLNVGFGRQLHA 149
I D T+ L+ V ++ G Q+HA
Sbjct: 859 IFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHA 918
Query: 150 FMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEME 209
++K+S +SL++MYSK A + F + E++LI
Sbjct: 919 LVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFIN-SPELDLI---------------- 961
Query: 210 MALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
SWNT+IS Y QN E + F + +G++ ++ T AS L AC
Sbjct: 962 ----------------SWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRAC 1005
Query: 270 CGLRN---VKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSF 326
++H + +K G+I++ FVS+ ++D+Y K M+ AE LL G + F
Sbjct: 1006 STGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAE--FLLHG-KYDF 1062
Query: 327 SISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKE 386
++S W A+ GY+K+ + S + +
Sbjct: 1063 DLAS----------------------------WNAIMFGYIKSNKSRKALEHFS-LMHEM 1093
Query: 387 GVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYA 446
G+ D + L + A L GK+I AY +++G D + S ++DMY KCG+M A
Sbjct: 1094 GIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNA 1153
Query: 447 EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHC 506
+F D V + MI+ Y +G E+ A+ ++ M G++PD TF ++ A
Sbjct: 1154 LELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCL 1213
Query: 507 GSVEMGEK-YFNSMTADYKISPETDHY--ACMIDLYGRANQLEKAIEFMKSIPTEE---- 559
++E G++ + N + DY + DH+ ++D+Y + ++ A + + +
Sbjct: 1214 TALEQGKQIHANVVKLDYSL----DHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFW 1269
Query: 560 DAVILG 565
+A++LG
Sbjct: 1270 NAMLLG 1275
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 129/575 (22%), Positives = 229/575 (39%), Gaps = 151/575 (26%)
Query: 4 LNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
L+L E + H IK+ +N L+++YSK ++ + K F PE ++ SWNT+I
Sbjct: 910 LDLGEQI--HALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMI 967
Query: 64 SACIKSHDLKQA----RSLFDSSPHKDLVTYNSML------------------------C 95
S+ +++ +A R L D T S+L C
Sbjct: 968 SSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKC 1027
Query: 96 GYIN------------AEGYEADALKLFI----------------------EMQSADEH- 120
G IN ++G + D + + + + A EH
Sbjct: 1028 GIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHF 1087
Query: 121 -------IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKC 173
I +DE T+ + + L+N+ G+Q+ A+ +K + + S ++DMY KC
Sbjct: 1088 SLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKC 1147
Query: 174 RCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISG 233
G+M AL+ F + D V+W T+ISG
Sbjct: 1148 --------------------------------GDMPNALELFG-EISRPDEVAWTTMISG 1174
Query: 234 YVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISN 293
Y++NGD + L ++ M +GV+ +E+TFA+ + A L ++ K+IH+ V+K +
Sbjct: 1175 YIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLD 1234
Query: 294 PFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
FV + +VD+YCKC G++++A R F +
Sbjct: 1235 HFVGTSLVDMYCKC-------------------------------GSVQDAYRVFRKMDV 1263
Query: 354 KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG-- 411
+ VV W A+ G + + + +L + G+ D + + +L AC+ H G
Sbjct: 1264 RKVVFWNAMLLGLAQHGHVDEALNLFRT-MQSNGIQPDKVTFIGVLSACS-----HSGLF 1317
Query: 412 KEIHAYILRM----GVQMDKKLISTLVDMYSKCGNMTYAE-IIFQNFIERDLVLYNVMIA 466
E + Y M G+ + + S LVD + G + AE +I + +Y ++
Sbjct: 1318 SEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLG 1377
Query: 467 CYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
G E A + +++L + P + +LS
Sbjct: 1378 ACRTKGDAETAKRVADKLL--ALDPSDSSAYVLLS 1410
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 109/473 (23%), Positives = 194/473 (41%), Gaps = 93/473 (19%)
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
+ + ++ G++ HA +V + + + ++LI MYSKC A +VF+ ++
Sbjct: 621 AIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDR----- 675
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE-----EGLKLFVR 249
D V+WN++++ Y Q D+ EG +LF
Sbjct: 676 ----------------------------DLVTWNSILAAYAQFADSSYENVLEGFRLFGL 707
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
+ E G T A L C V+ ++ +H + +K G + FVS +V++YCK
Sbjct: 708 LREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGL 767
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK--------------- 354
+ A + R++ + M+ Y +EA R F +
Sbjct: 768 VGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFXPDFSNLHCVIGG 827
Query: 355 ------------------------------NVVVWTALFSGYVKAQNCEALFDLLSEFVT 384
N+ W + ++ A A D +
Sbjct: 828 VNSDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLL- 886
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
+ + D++ LVI+L A L G++IHA +++ + ++L++MYSK G +
Sbjct: 887 RSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVY 946
Query: 445 YAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR 504
AE F N E DL+ +N MI+ YA + E +AI F ++L G+KPD T ++L R
Sbjct: 947 AAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVL---R 1003
Query: 505 HCGSVEMGEKY-FNSMTADYKIS----PETDHYACMIDLYGRANQLEKAIEFM 552
C + + GE + S Y I ++ +IDLY + ++++A EF+
Sbjct: 1004 ACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEA-EFL 1055
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 120/511 (23%), Positives = 204/511 (39%), Gaps = 102/511 (19%)
Query: 50 EMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALK 109
++P+R + N +I+ K L AR +FD S +DLVT+NS+L Y
Sbjct: 642 DLPDR--YLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAY------------ 687
Query: 110 LFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG-RQLHAFMVKTSNDASGFA-VSSLI 167
Q AD V L L GF +L + SGF VS +
Sbjct: 688 ----AQFADSSYE----NVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETV 739
Query: 168 DMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSW 227
Y+ + E++L A+V C+ G + A F + PE DAV W
Sbjct: 740 HGYAVKIGF------------ELDLFVSGALVNIYCKYGLVGQARLLFDKMPE-RDAVLW 786
Query: 228 NTLISGYVQNGDAEEGLKLFVRMGENGVRW---NEHTFASALSACCGLRNVKCAKEIHSW 284
N ++ YV+N +E L+ F +G N H +++ + A+++ ++
Sbjct: 787 NVMLKAYVENSFQDEALRFFSAFHRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAY 846
Query: 285 VLK-------------NGLISNPFVSSGIVDVYCKC------------------------ 307
+K N ++ F+ +G + C
Sbjct: 847 AMKMFPFDQGSNIFAWNKKLTE-FLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAV 905
Query: 308 --ENMNYAESMLLLKGVRNSFSI-----SSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
++++ E + L +++SF+ +S++ YS G + A + F + E +++ W
Sbjct: 906 GADDLDLGEQIHALV-IKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWN 964
Query: 361 ALFSGYVKAQN---CEAL---FDLLSEFVTKEGVVTDALILVILLGACALQAA---LHPG 411
+ S Y AQN EA+ DLL ++G+ D L +L AC+ G
Sbjct: 965 TMISSY--AQNNLEMEAICTFRDLL-----RDGLKPDQFTLASVLRACSTGDEGEYFTLG 1017
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
++H Y ++ G+ D + + L+D+YSK G M AE + + DL +N ++ Y
Sbjct: 1018 SQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKS 1077
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
KA+ F M E GI D +T + A
Sbjct: 1078 NKSRKALEHFSLMHEMGIPIDEITLATAIKA 1108
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 11/165 (6%)
Query: 406 AALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMI 465
A L GK HA I+ G D+ L + L+ MYSKCG++ A +F +RDLV +N ++
Sbjct: 625 ADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSIL 684
Query: 466 ACYAHHGHEE-----KAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
A YA + LF + E G +T +L G V++ E
Sbjct: 685 AAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAV 744
Query: 521 ADYKISPETDHY--ACMIDLYGRANQLEKAIEFMKSIPTEEDAVI 563
KI E D + ++++Y + + +A +P E DAV+
Sbjct: 745 ---KIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVL 785
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 175/606 (28%), Positives = 300/606 (49%), Gaps = 79/606 (13%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N++++ K+ + A F +SP DL+++N+M+ Y E +A+ F ++ +
Sbjct: 933 NSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQ-NNLEMEAICTFRDLLR--D 989
Query: 120 HIRMDEFTVTSTLNLCVKLLNVG-------FGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
++ D+FT+ S L C + G G Q+H + +K F ++LID+YSK
Sbjct: 990 GLKPDQFTLASVLRAC----STGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSK 1045
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
+EA + G + D SWN ++
Sbjct: 1046 GGKMDEAEFLLHGKYD---------------------------------FDLASWNAIMF 1072
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
GY+++ + + L+ F M E G+ +E T A+A+ A L N+K K+I ++ +K G +
Sbjct: 1073 GYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNN 1132
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
+ +VSSG++D+Y KC G+M A F ++
Sbjct: 1133 DLWVSSGVLDMYIKC-------------------------------GDMPNALELFGEIS 1161
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
+ V WT + SGY++ + + + + GV D L+ A + AL GK
Sbjct: 1162 RPDEVAWTTMISGYIENGDEDHALSVY-HLMRVSGVQPDEYTFATLIKASSCLTALEQGK 1220
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
+IHA ++++ +D + ++LVDMY KCG++ A +F+ R +V +N M+ A HG
Sbjct: 1221 QIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHG 1280
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
H ++A+ LF M GI+PD VTF+ +LSA H G KYF++M Y I+PE +HY
Sbjct: 1281 HVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHY 1340
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
+C++D GRA ++++A + S+P + A + + L CR +AE A +KLL L+
Sbjct: 1341 SCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDP 1400
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
++ + YV L+N+YAA W ++ R M+ + G SW+ V++++H+F V D SHP
Sbjct: 1401 SDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHP 1460
Query: 653 KTNAIY 658
+ + IY
Sbjct: 1461 QASLIY 1466
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 149/606 (24%), Positives = 264/606 (43%), Gaps = 123/606 (20%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A+K G L + L++IY K+ L+ ++R LFD+MPER+ WN ++ A +++
Sbjct: 740 HGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQ 799
Query: 73 KQARSLFDSSPHKD--LVTYNSMLC--GYIN----------AEGYEADALKLFIEMQSAD 118
+A F S+ H+ ++++ C G +N AE +A A+K+F Q ++
Sbjct: 800 DEALRFF-SAFHRSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSN 858
Query: 119 -----------------------------EHIRMDEFTVTSTLNLCVKLLNVGFGRQLHA 149
I D T+ L+ V ++ G Q+HA
Sbjct: 859 IFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHA 918
Query: 150 FMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEME 209
++K+S +SL++MYSK A + F + E++LI
Sbjct: 919 LVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFIN-SPELDLI---------------- 961
Query: 210 MALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
SWNT+IS Y QN E + F + +G++ ++ T AS L AC
Sbjct: 962 ----------------SWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRAC 1005
Query: 270 CGLRN---VKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSF 326
++H + +K G+I++ FVS+ ++D+Y K M+ AE LL G + F
Sbjct: 1006 STGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAE--FLLHG-KYDF 1062
Query: 327 SISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKE 386
++S W A+ GY+K+ + S + +
Sbjct: 1063 DLAS----------------------------WNAIMFGYIKSNKSRKALEHFS-LMHEM 1093
Query: 387 GVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYA 446
G+ D + L + A L GK+I AY +++G D + S ++DMY KCG+M A
Sbjct: 1094 GIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNA 1153
Query: 447 EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHC 506
+F D V + MI+ Y +G E+ A+ ++ M G++PD TF ++ A
Sbjct: 1154 LELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCL 1213
Query: 507 GSVEMGEK-YFNSMTADYKISPETDHY--ACMIDLYGRANQLEKAIEFMKSIPTEE---- 559
++E G++ + N + DY + DH+ ++D+Y + ++ A + + +
Sbjct: 1214 TALEQGKQIHANVVKLDYSL----DHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFW 1269
Query: 560 DAVILG 565
+A++LG
Sbjct: 1270 NAMLLG 1275
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 129/575 (22%), Positives = 229/575 (39%), Gaps = 151/575 (26%)
Query: 4 LNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
L+L E + H IK+ +N L+++YSK ++ + K F PE ++ SWNT+I
Sbjct: 910 LDLGEQI--HALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMI 967
Query: 64 SACIKSHDLKQA----RSLFDSSPHKDLVTYNSML------------------------C 95
S+ +++ +A R L D T S+L C
Sbjct: 968 SSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKC 1027
Query: 96 GYIN------------AEGYEADALKLFI----------------------EMQSADEH- 120
G IN ++G + D + + + + A EH
Sbjct: 1028 GIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHF 1087
Query: 121 -------IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKC 173
I +DE T+ + + L+N+ G+Q+ A+ +K + + S ++DMY KC
Sbjct: 1088 SLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKC 1147
Query: 174 RCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISG 233
G+M AL+ F + D V+W T+ISG
Sbjct: 1148 --------------------------------GDMPNALELFG-EISRPDEVAWTTMISG 1174
Query: 234 YVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISN 293
Y++NGD + L ++ M +GV+ +E+TFA+ + A L ++ K+IH+ V+K +
Sbjct: 1175 YIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLD 1234
Query: 294 PFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
FV + +VD+YCKC G++++A R F +
Sbjct: 1235 HFVGTSLVDMYCKC-------------------------------GSVQDAYRVFRKMDV 1263
Query: 354 KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG-- 411
+ VV W A+ G + + + +L + G+ D + + +L AC+ H G
Sbjct: 1264 RKVVFWNAMLLGLAQHGHVDEALNLFRT-MQSNGIQPDKVTFIGVLSACS-----HSGLF 1317
Query: 412 KEIHAYILRM----GVQMDKKLISTLVDMYSKCGNMTYAE-IIFQNFIERDLVLYNVMIA 466
E + Y M G+ + + S LVD + G + AE +I + +Y ++
Sbjct: 1318 SEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLG 1377
Query: 467 CYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
G E A + +++L + P + +LS
Sbjct: 1378 ACRTKGDAETAKRVADKLL--ALDPSDSSAYVLLS 1410
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 109/473 (23%), Positives = 194/473 (41%), Gaps = 93/473 (19%)
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
+ + ++ G++ HA +V + + + ++LI MYSKC A +VF+ ++
Sbjct: 621 AIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDR----- 675
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE-----EGLKLFVR 249
D V+WN++++ Y Q D+ EG +LF
Sbjct: 676 ----------------------------DLVTWNSILAAYAQFADSSYENVLEGFRLFGL 707
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
+ E G T A L C V+ ++ +H + +K G + FVS +V++YCK
Sbjct: 708 LREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGL 767
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK--------------- 354
+ A + R++ + M+ Y +EA R F +
Sbjct: 768 VGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFFPDFSNLHCVIGG 827
Query: 355 ------------------------------NVVVWTALFSGYVKAQNCEALFDLLSEFVT 384
N+ W + ++ A A D +
Sbjct: 828 VNSDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLL- 886
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
+ + D++ LVI+L A L G++IHA +++ + ++L++MYSK G +
Sbjct: 887 RSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVY 946
Query: 445 YAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR 504
AE F N E DL+ +N MI+ YA + E +AI F ++L G+KPD T ++L R
Sbjct: 947 AAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVL---R 1003
Query: 505 HCGSVEMGEKY-FNSMTADYKIS----PETDHYACMIDLYGRANQLEKAIEFM 552
C + + GE + S Y I ++ +IDLY + ++++A EF+
Sbjct: 1004 ACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEA-EFL 1055
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 120/511 (23%), Positives = 204/511 (39%), Gaps = 102/511 (19%)
Query: 50 EMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALK 109
++P+R + N +I+ K L AR +FD S +DLVT+NS+L Y
Sbjct: 642 DLPDR--YLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAY------------ 687
Query: 110 LFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG-RQLHAFMVKTSNDASGFA-VSSLI 167
Q AD V L L GF +L + SGF VS +
Sbjct: 688 ----AQFADSSYE----NVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETV 739
Query: 168 DMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSW 227
Y+ + E++L A+V C+ G + A F + PE DAV W
Sbjct: 740 HGYAVKIGF------------ELDLFVSGALVNIYCKYGLVGQARLLFDKMPE-RDAVLW 786
Query: 228 NTLISGYVQNGDAEEGLKLFVRMGENGVRW---NEHTFASALSACCGLRNVKCAKEIHSW 284
N ++ YV+N +E L+ F +G N H +++ + A+++ ++
Sbjct: 787 NVMLKAYVENSFQDEALRFFSAFHRSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAY 846
Query: 285 VLK-------------NGLISNPFVSSGIVDVYCKC------------------------ 307
+K N ++ F+ +G + C
Sbjct: 847 AMKMFPFDQGSNIFAWNKKLTE-FLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAV 905
Query: 308 --ENMNYAESMLLLKGVRNSFSI-----SSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
++++ E + L +++SF+ +S++ YS G + A + F + E +++ W
Sbjct: 906 GADDLDLGEQIHALV-IKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWN 964
Query: 361 ALFSGYVKAQN---CEAL---FDLLSEFVTKEGVVTDALILVILLGACALQAA---LHPG 411
+ S Y AQN EA+ DLL ++G+ D L +L AC+ G
Sbjct: 965 TMISSY--AQNNLEMEAICTFRDLL-----RDGLKPDQFTLASVLRACSTGDEGEYFTLG 1017
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
++H Y ++ G+ D + + L+D+YSK G M AE + + DL +N ++ Y
Sbjct: 1018 SQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKS 1077
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
KA+ F M E GI D +T + A
Sbjct: 1078 NKSRKALEHFSLMHEMGIPIDEITLATAIKA 1108
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 11/165 (6%)
Query: 406 AALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMI 465
A L GK HA I+ G D+ L + L+ MYSKCG++ A +F +RDLV +N ++
Sbjct: 625 ADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSIL 684
Query: 466 ACYAHHGHEE-----KAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
A YA + LF + E G +T +L G V++ E
Sbjct: 685 AAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAV 744
Query: 521 ADYKISPETDHY--ACMIDLYGRANQLEKAIEFMKSIPTEEDAVI 563
KI E D + ++++Y + + +A +P E DAV+
Sbjct: 745 ---KIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVL 785
>gi|334186267|ref|NP_192012.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635642|sp|Q9SV26.2|PP297_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g01030, mitochondrial; Flags: Precursor
gi|332656570|gb|AEE81970.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 190/637 (29%), Positives = 328/637 (51%), Gaps = 49/637 (7%)
Query: 75 ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNL 134
A LFD P +D + +N ++ + + +E A++LF EMQ + + + T+ L +
Sbjct: 42 ANKLFDEMPKRDDLAWNEIVMVNLRSGNWEK-AVELFREMQFSGA--KAYDSTMVKLLQV 98
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
C GRQ+H ++++ +++ +SLI MYS+ E + +VF + NL S
Sbjct: 99 CSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDR-NLSS 157
Query: 195 KNAMVAACCREGEMEMALKTFWRQPEL----NDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
N+++++ + G ++ A+ + E+ D V+WN+L+SGY G +++ + + RM
Sbjct: 158 WNSILSSYTKLGYVDDAIGLL-DEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRM 216
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
G++ + + +S L A ++K K IH ++L+N L + +V + ++D+Y K +
Sbjct: 217 QIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYL 276
Query: 311 NYAESML----------------------LLK------------GVR-NSFSISSMIVGY 335
YA + LLK G++ ++ + +S+ GY
Sbjct: 277 PYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGY 336
Query: 336 SLQGNMEEARRHFDSLTEK----NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTD 391
+ G E+A + EK NVV WTA+FSG K N + + + +EGV +
Sbjct: 337 ATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIK-MQEEGVGPN 395
Query: 392 ALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQ 451
A + LL + LH GKE+H + LR + D + + LVDMY K G++ A IF
Sbjct: 396 AATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFW 455
Query: 452 NFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEM 511
+ L +N M+ YA G E+ I F MLE G++PDA+TF ++LS ++ G V+
Sbjct: 456 GIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQE 515
Query: 512 GEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVC 571
G KYF+ M + Y I P +H +CM+DL GR+ L++A +F++++ + DA I G+FL+ C
Sbjct: 516 GWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSC 575
Query: 572 RLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAG 631
+++R+ ELA A ++L LE +N A Y+ + N+Y+ W ++ RIR MR +
Sbjct: 576 KIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDL 635
Query: 632 CSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
SW+ ++ +HIF +HP IY L E+
Sbjct: 636 WSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEM 672
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 124/305 (40%), Gaps = 77/305 (25%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+LK H ++ L LI +Y K L +R +FD M +N+ +WN+++S
Sbjct: 240 HLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVS 299
Query: 65 ACIKSHDLKQARSLF----DSSPHKDLVTYNSMLCGYI---------------------- 98
+ LK A +L D +T+NS+ GY
Sbjct: 300 GLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAP 359
Query: 99 ------------NAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNL--CVKLLNVGFG 144
+ G +ALK+FI+MQ +E + + T+++ L + C+ LL+ G
Sbjct: 360 NVVSWTAIFSGCSKNGNFRNALKVFIKMQ--EEGVGPNAATMSTLLKILGCLSLLHS--G 415
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
+++H F ++ + + ++L+DMY K
Sbjct: 416 KEVHGFCLRKNLICDAYVATALVDMYGK-------------------------------- 443
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFAS 264
G+++ A++ FW + A SWN ++ GY G EEG+ F M E G+ + TF S
Sbjct: 444 SGDLQSAIEIFWGIKNKSLA-SWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTS 502
Query: 265 ALSAC 269
LS C
Sbjct: 503 VLSVC 507
>gi|357507475|ref|XP_003624026.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360495|gb|ABN08505.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499041|gb|AES80244.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 646
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 168/521 (32%), Positives = 273/521 (52%), Gaps = 20/521 (3%)
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
D + L + K + F R+L M D + + +I Y KC EEA +F
Sbjct: 133 DHYVRNGILGIYAKYGPIEFARKLFDEM----PDRTVADWNVMISGYWKCGNEEEASTLF 188
Query: 184 EGCTEE---VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
++ N+I+ M+ ++G ++ A F + PE VSWN ++SGY Q G
Sbjct: 189 HVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPE-RSVVSWNAMLSGYAQGGAP 247
Query: 241 EEGLKLFVRMGENG-VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKN--GLISNPFVS 297
EE ++LF M G V+ +E T+ + +S+C L + C E L + G N FV
Sbjct: 248 EETIRLFNDMLSPGNVQPDETTWVTVISSCSSLGD-PCLSESIVRKLDDTVGFRPNYFVK 306
Query: 298 SGIVDVYCKCENMNYAESMLLLKGV---RNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
+ ++D++ KC N+ A + GV R+S ++MI Y+ G++ AR FD + ++
Sbjct: 307 TALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSARHLFDKMPQR 366
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
+ V W ++ +GY + L E ++ E D + +V + AC L G
Sbjct: 367 DTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVTMVSVFSACGHLGELGLGNWA 426
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
+ + +Q+ + ++L+ MYS+CG+M A +IFQ RDLV YN +I+ +A HGH
Sbjct: 427 VSILKENHIQISISVYNSLISMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHG 486
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC 534
++I L +M E GI+PD +T++AIL+A H G + G++ F S+ P+ DHYAC
Sbjct: 487 MESIELLLKMKEDGIEPDRITYIAILTACSHAGLLGEGQRLFESIKF-----PDVDHYAC 541
Query: 535 MIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNN 594
MID+ GRA +LE+A++ ++S+P E A I GS LN +++ EL A KL ++E +N
Sbjct: 542 MIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAKLFKVEPHN 601
Query: 595 KARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWV 635
YV L+N+YA+ G W + ++R MR + G SW+
Sbjct: 602 SGNYVLLSNIYASAGRWKDGDKVRDTMRKQGVKKTTGLSWL 642
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 142/582 (24%), Positives = 256/582 (43%), Gaps = 126/582 (21%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPER------------- 54
E+++ +K+G N ++ IY+K+ + +RKLFDEMP+R
Sbjct: 117 ESMLFLAHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYW 176
Query: 55 ----------------------NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNS 92
NV +W T+I+ K +LK AR FD P + +V++N+
Sbjct: 177 KCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNA 236
Query: 93 MLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMV 152
ML GY G + ++LF +M S +++ DE T + ++ C L + + V
Sbjct: 237 MLSGYAQG-GAPEETIRLFNDMLSPG-NVQPDETTWVTVISSCSSLGDPCLSESI----V 290
Query: 153 KTSNDASG-----FAVSSLIDMYSKCRCYEEACRVFE--GCTEEVNLISKNAMVAACCRE 205
+ +D G F ++L+DM++KC E A ++FE G + + + NAM++A R
Sbjct: 291 RKLDDTVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARV 350
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM-GENGVRWNEHTFAS 264
G++ A F + P+ D VSWN++I+GY QNG++ + +KLF M + +E T S
Sbjct: 351 GDLPSARHLFDKMPQ-RDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVTMVS 409
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
SAC L + N+A S+L ++
Sbjct: 410 VFSACGHLGELGLG--------------------------------NWAVSILKENHIQI 437
Query: 325 SFSI-SSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV 383
S S+ +S+I YS G+M++A F + +++V + L SG+ + + +LL + +
Sbjct: 438 SISVYNSLISMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLLK-M 496
Query: 384 TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNM 443
++G+ D + + +L AC+ HA +L G
Sbjct: 497 KEDGIEPDRITYIAILTACS-----------HAGLLGEG--------------------- 524
Query: 444 TYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAF 503
+ +F++ D+ Y MI G E+A+ L + M ++P A + ++L+A
Sbjct: 525 ---QRLFESIKFPDVDHYACMIDMLGRAGRLEEAMKLIQSM---PMEPHAGIYGSLLNAT 578
Query: 504 RHCGSVEMGEKYFNSMTADYKISPE-TDHYACMIDLYGRANQ 544
VE+GE + +K+ P + +Y + ++Y A +
Sbjct: 579 SIHKQVELGELAAAKL---FKVEPHNSGNYVLLSNIYASAGR 617
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 148/346 (42%), Gaps = 72/346 (20%)
Query: 285 VLKNGLISNPFVSSGIVDVYC-------------------------------KCENMNYA 313
VLK+G + +V +GI+ +Y KC N A
Sbjct: 125 VLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEA 184
Query: 314 ESMLLLKG----VRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
++ + G RN + ++MI G++ +GN++ AR +FD + E++VV W A+ SGY +
Sbjct: 185 STLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQG 244
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGAC-ALQAALHPGKEIHAYILRMGVQMDKK 428
E L ++ ++ V D V ++ +C +L + +G + +
Sbjct: 245 GAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLGDPCLSESIVRKLDDTVGFRPNYF 304
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNF----------------------------------I 454
+ + L+DM++KCGN+ A IF+
Sbjct: 305 VKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSARHLFDKMP 364
Query: 455 ERDLVLYNVMIACYAHHGHEEKAILLFEEML-EKGIKPDAVTFVAILSAFRHCGSVEMGE 513
+RD V +N MIA Y +G KAI LFEEM+ + KPD VT V++ SA H G + +G
Sbjct: 365 QRDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVTMVSVFSACGHLGELGLG- 423
Query: 514 KYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE 559
+ S+ + I Y +I +Y R ++ A+ + + T +
Sbjct: 424 NWAVSILKENHIQISISVYNSLISMYSRCGSMQDAVLIFQEMATRD 469
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 69/140 (49%), Gaps = 5/140 (3%)
Query: 416 AYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEE 475
A++L+ G D + + ++ +Y+K G + +A +F +R + +NVMI+ Y G+EE
Sbjct: 123 AHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEE 182
Query: 476 KAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACM 535
+A LF M ++ I + +T+ +++ G+++ YF+ M +S + M
Sbjct: 183 EASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVS-----WNAM 237
Query: 536 IDLYGRANQLEKAIEFMKSI 555
+ Y + E+ I +
Sbjct: 238 LSGYAQGGAPEETIRLFNDM 257
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 178/538 (33%), Positives = 276/538 (51%), Gaps = 37/538 (6%)
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSS-LIDMYSKCRCYEEACRVFEGCTEEVNLI 193
C++ + G+++HA K SN G +S+ LI MY+KC +A +F+ ++ +L
Sbjct: 73 CLRHRKLELGKRVHAH-TKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQK-DLC 130
Query: 194 SKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGEN 253
S N M++ G +E A K F P D SWN +ISGYV G E L LF M EN
Sbjct: 131 SWNTMISGYANVGRIEQARKLFDEMPH-RDNFSWNAVISGYVSQGWYMEALDLFRMMQEN 189
Query: 254 -GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
N T +SAL+A + +++ KEIH +++++GL + V + ++D+Y KC
Sbjct: 190 ESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKC----- 244
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G++ EAR FD + +K++V WT + +
Sbjct: 245 --------------------------GSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRK 278
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
+ F L + + GV + +L ACA AA GKE+H Y+ R+G S
Sbjct: 279 KEGFSLFRDLMG-SGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASA 337
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
LV +YSKCGN A +F DLV + +I YA +G + A+ FE +L G KPD
Sbjct: 338 LVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPD 397
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
+TFV +LSA H G V++G +YF+S+ + + DHYAC+IDL R+ + ++A +
Sbjct: 398 EITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENII 457
Query: 553 KSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWA 612
++P + D + S L CR++ N ELA A + L LE N A Y+ L+N+YA G W
Sbjct: 458 DNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEPENPATYITLSNIYANAGLWT 517
Query: 613 EMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYE 670
E ++R M + G SW+ ++ ++H+F VGD SHPK + I+ L + ++ E
Sbjct: 518 EETKVRNDMDNRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKISDIHEYLGELSKKMKE 575
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 135/488 (27%), Positives = 230/488 (47%), Gaps = 77/488 (15%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R L L + + H +A + + +N+LIH+Y+K L +++ LFDE+P++++ SWNT
Sbjct: 77 RKLELGKRVHAHTKA--SNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNT 134
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+IS ++QAR LFD PH+D ++N+++ GY+ ++G+ +AL LF MQ +E
Sbjct: 135 MISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYV-SQGWYMEALDLFRMMQE-NESS 192
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+ FT++S L + ++ G+++H +++++ + ++L+D+Y KC EA
Sbjct: 193 NCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARG 252
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F+ +MA K D VSW T+I ++G +
Sbjct: 253 IFD------------------------QMADK---------DIVSWTTMIHRCFEDGRKK 279
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
EG LF + +GVR NE+TFA L+AC L + KE+H ++ + G F +S +V
Sbjct: 280 EGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALV 339
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
VY KC N A RR F+ + ++V WT+
Sbjct: 340 HVYSKCGNTETA-------------------------------RRVFNQMPRPDLVSWTS 368
Query: 362 LFSGYVKAQNCEALFDL-LSEFVTKEGVVTDALILVILLGACALQAALHPGKE-IHAYIL 419
L GY AQN + L E + + G D + V +L AC + G E H+
Sbjct: 369 LIVGY--AQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKE 426
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGH----E 474
+ G+ + ++D+ ++ G AE I N ++ D L+ ++ HG+ E
Sbjct: 427 KHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELAE 486
Query: 475 EKAILLFE 482
A LFE
Sbjct: 487 RAAKALFE 494
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 172/360 (47%), Gaps = 6/360 (1%)
Query: 230 LISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG 289
+I + Q +E + R+ + R +++ ++AC R ++ K +H+ +
Sbjct: 38 IIELFCQQNRLKEAVDYLHRIPQPSPR----LYSTLIAACLRHRKLELGKRVHAHTKASN 93
Query: 290 LISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFD 349
I +S+ ++ +Y KC ++ A+ + ++ S ++MI GY+ G +E+AR+ FD
Sbjct: 94 FIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFD 153
Query: 350 SLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALH 409
+ ++ W A+ SGYV DL E + L L A A ++L
Sbjct: 154 EMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLR 213
Query: 410 PGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYA 469
GKEIH Y++R G+++D+ + + L+D+Y KCG++ A IF ++D+V + MI
Sbjct: 214 RGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCF 273
Query: 470 HHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPET 529
G +++ LF +++ G++P+ TF +L+A + +MG++ MT P +
Sbjct: 274 EDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTR-VGYDPFS 332
Query: 530 DHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLR 589
+ ++ +Y + E A +P D V S + N ++A + E LLR
Sbjct: 333 FAASALVHVYSKCGNTETARRVFNQMP-RPDLVSWTSLIVGYAQNGQPDMALQFFESLLR 391
>gi|77554180|gb|ABA96976.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 780
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 193/645 (29%), Positives = 305/645 (47%), Gaps = 105/645 (16%)
Query: 7 KEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISAC 66
K L H A+K GL N L+ +Y K + S ++FD M E+N SW
Sbjct: 237 KFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSW------- 289
Query: 67 IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEF 126
NS + ++NA G+ D L++F +M ++ ++
Sbjct: 290 ------------------------NSAIGCFLNA-GFYGDVLRMFRKM--SEHNVMPGSI 322
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
T++S L V+L + GR++H + +K + D F +SL+DMY+K E+A +FE
Sbjct: 323 TLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFE-- 380
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
Q + + VSWN +I+ VQNG E +L
Sbjct: 381 -------------------------------QMKDRNVVSWNAMIANLVQNGAETEAFRL 409
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
M ++G N T + L AC + ++K K+IH+W ++ GL+ + F+S+ ++D+Y K
Sbjct: 410 VTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSK 469
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
C ++ A RN F S EK+ V + L GY
Sbjct: 470 CGQLSLA---------RNIFERS-----------------------EKDDVSYNTLILGY 497
Query: 367 VKAQNC-EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
++ C E+L LL + + G+ DA+ + L AC + GKEIH ++R +
Sbjct: 498 SQSPWCFESL--LLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSG 555
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
L ++L+D+Y+K G + A IF ++D+ +N MI Y HG + A LFE M
Sbjct: 556 HPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMK 615
Query: 486 EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQL 545
G+ D V+++A+L+A H G V+ G+KYF+ M A I P+ HYACM+DL GRA QL
Sbjct: 616 GDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQ-NIEPQQMHYACMVDLLGRAGQL 674
Query: 546 EKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVY 605
K E ++ +P ++ + G+ L CR++ N ELA A E L L+ + Y + N+Y
Sbjct: 675 SKCAEIIRDMPFPANSDVWGALLGACRIHGNIELAQWAAEHLFELKPEHSGYYTLMINMY 734
Query: 606 AAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVE--HEIHIFTVGD 648
A G W E +IRK M+ K + SWV + +++ F VGD
Sbjct: 735 AETGRWNEANKIRKLMKSRKVQKNPAYSWVQDQDGNKLQAFLVGD 779
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 145/334 (43%), Gaps = 41/334 (12%)
Query: 220 ELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAK 279
L A WN+L E L+++ M + VR ++ TF AL A K
Sbjct: 78 RLRSAFLWNSLSRALSSASLPSEALRVYNLMLRSAVRPDDRTFPFALHAAAAAVASAEDK 137
Query: 280 --EIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSL 337
E+H+ L+ G +++ F + +V Y C
Sbjct: 138 GLELHASALRRGHLADVFTGNTLVAFYAAC------------------------------ 167
Query: 338 QGNMEEARRHFDSLTEKNVVVWTALFSGY-VKAQNCEALFDLLSEFVTKEGVVTDALILV 396
G +ARR FD + E++VV W +L S + V +A L+S + + G + LV
Sbjct: 168 -GKACDARRVFDEMPERDVVSWNSLVSAFLVNGMFHDARRALVS--MMRSGFPLNVASLV 224
Query: 397 ILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER 456
++ AC + G IHA +++G+ L + LVDMY K G++ + +F +E+
Sbjct: 225 SVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQ 284
Query: 457 DLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYF 516
+ V +N I C+ + G + +F +M E + P ++T ++L A GS ++G +
Sbjct: 285 NEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVH 344
Query: 517 NSMTADYKISPETDHYAC--MIDLYGRANQLEKA 548
K + + D + ++D+Y + LEKA
Sbjct: 345 GY---SIKRAMDLDIFVANSLVDMYAKFGSLEKA 375
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
G E+HA LR G D +TLV Y+ CG A +F ERD+V +N +++ +
Sbjct: 138 GLELHASALRRGHLADVFTGNTLVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFLV 197
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKY---FNSMTADYKISP 527
+G A M+ G + + V+++ A CG+ E EK+ +++ ++
Sbjct: 198 NGMFHDARRALVSMMRSGFPLNVASLVSVVPA---CGT-EQEEKFGLSIHALAVKVGLNT 253
Query: 528 ETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAV----ILGSFLN 569
+ ++D+YG+ +E +++ + E++ V +G FLN
Sbjct: 254 MVNLANALVDMYGKFGDVEASMQVFDGM-LEQNEVSWNSAIGCFLN 298
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 151/438 (34%), Positives = 247/438 (56%), Gaps = 38/438 (8%)
Query: 227 WNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVL 286
WN +I G+ +G L+L+ +M E G++ ++ F AL +C GL +++ K IH ++
Sbjct: 786 WNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLV 845
Query: 287 KNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARR 346
G ++ FV + +VD+Y KC G++E AR
Sbjct: 846 CCGCSNDLFVDAALVDMYAKC-------------------------------GDIEAARL 874
Query: 347 HFDSLTEKNVVVWTALFSGYV-KAQNCEAL--FDLLSEFVTKEGVVTDALILVILLGACA 403
FD + +++V WT++ SGY N E L FDL+ GV+ + + ++ +L AC
Sbjct: 875 VFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRS----SGVIPNRVSILSVLLACG 930
Query: 404 LQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNV 463
AL G+ H+Y+++ G + D + + ++DMYSKCG++ A +F +DLV ++
Sbjct: 931 NLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSA 990
Query: 464 MIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADY 523
MIA Y HGH KAI LF++M++ G++P VTF +LSA H G +E G+ YF MT ++
Sbjct: 991 MIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEF 1050
Query: 524 KISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEA 583
I+ + +YACM+DL GRA QL +A++ ++++P E DA I GS L CR++ N +LA +
Sbjct: 1051 VIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKI 1110
Query: 584 EEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHI 643
+ L L+ + +V L+N+YAA+ W E+ ++RK M N+ G S V ++++H
Sbjct: 1111 ADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHK 1170
Query: 644 FTVGDVSHPKTNAIYSVL 661
F VGD SHP+ +Y+ L
Sbjct: 1171 FGVGDRSHPQWEKLYAKL 1188
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 192/651 (29%), Positives = 319/651 (49%), Gaps = 86/651 (13%)
Query: 16 AIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQA 75
A+KA L + ++IH ++K N DE+ ++F + ++ K + +A
Sbjct: 109 ALKACAGLRMLELGKVIHGFAKKN---------DEIGS-DMFVGSALVELYSKCGQMGEA 158
Query: 76 RSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLC 135
+F+ D V + SM+ GY E +AL LF +M D + +D T+ S ++ C
Sbjct: 159 LKVFEEFQRPDTVLWTSMVTGYQQNNDPE-EALALFSQMVMMD-CVVLDPVTLVSVVSAC 216
Query: 136 VKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISK 195
+LLNV G +H +++ D V+SL+++Y+K C + A +F
Sbjct: 217 AQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFS----------- 265
Query: 196 NAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGV 255
+ PE D +SW+T+I+ Y N A E L LF M E
Sbjct: 266 ---------------------KMPE-KDVISWSTMIACYANNEAANEALNLFHEMIEKRF 303
Query: 256 RWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAES 315
N T SAL AC RN++ K+IH + G + VS+ ++D+Y KC
Sbjct: 304 EPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCP----- 358
Query: 316 MLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEAL 375
+EA F L +K+VV W AL SGY AQN A
Sbjct: 359 --------------------------DEAVDLFQRLPKKDVVSWVALLSGY--AQNGMA- 389
Query: 376 FDLLSEF--VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL 433
+ + F + +G+ DA+ +V +L A + +H Y++R G + + ++L
Sbjct: 390 YKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASL 449
Query: 434 VDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG-IKPD 492
+++YSKCG++ A +F+ I RD+V+++ MIA Y HG +A+ +F++M++ ++P+
Sbjct: 450 IELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPN 509
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
VTF++ILSA H G VE G K F+ M DY++ P+++H+ M+DL GR QL KA++ +
Sbjct: 510 NVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDII 569
Query: 553 KSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWA 612
+P + G+ L CR++ N E+ A + L L+ ++ Y+ L+N+YA +G W
Sbjct: 570 NRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWD 629
Query: 613 EMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+ +R ++ RG+K + G S V V +H F D HP + IY +L
Sbjct: 630 NVAELRTRIKERGLK--KMFGQSMVEVRGGVHSFLASDRFHPDSQKIYELL 678
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 120/475 (25%), Positives = 196/475 (41%), Gaps = 103/475 (21%)
Query: 4 LNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
LN+K H I+ N L+++Y+K + + LF +MPE++V SW+T+I
Sbjct: 220 LNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMI 279
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
AC Y N E +AL LF EM ++
Sbjct: 280 -AC------------------------------YANNEAAN-EALNLFHEM--IEKRFEP 305
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
+ TV S L C N+ G+++H V + ++LIDMY KC C +EA +F
Sbjct: 306 NSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLF 365
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
+ R P+ D VSW L+SGY QNG A +
Sbjct: 366 Q--------------------------------RLPK-KDVVSWVALLSGYAQNGMAYKS 392
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
+ +F M +G++ + L+A L + A +H +V+++G SN FV + ++++
Sbjct: 393 MGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIEL 452
Query: 304 YCKCENMNYAESMLLLKG--VRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
Y KC ++ +++ L KG VR+ SSMI Y + G EA FD + + + V
Sbjct: 453 YSKCGSL--GDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTV---- 506
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
N +LS + G+V + L + + +H Y LR
Sbjct: 507 -------RPNNVTFLSILSA-CSHAGLVEEGLKIF--------------DRMVHDYQLR- 543
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMI-ACYAHHGHE 474
D + +VD+ + G + A +II + I ++ ++ AC HH E
Sbjct: 544 ---PDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIE 595
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 115/488 (23%), Positives = 201/488 (41%), Gaps = 114/488 (23%)
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
+ A +F+ P+ +N M+ G+ +G +L+L+ +M ++ ++ D+F
Sbjct: 768 IDAASIVFEDIPNPCSFLWNVMIRGFAT-DGRFLSSLELYSKMM--EKGLKPDKFAFPFA 824
Query: 132 LNLCVKLLNVGFGRQLHAFMV--KTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEE 189
L C L ++ G+ +H +V SND F ++L+DMY+KC E A VF+
Sbjct: 825 LKSCAGLSDLQRGKVIHQHLVCCGCSNDL--FVDAALVDMYAKCGDIEAARLVFD----- 877
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
+MA++ D VSW ++ISGY NG E L F
Sbjct: 878 -------------------KMAVR---------DLVSWTSMISGYAHNGYNSETLGFFDL 909
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
M +GV N + S L AC L ++ + HS+V++ G + V++ I+D+Y KC
Sbjct: 910 MRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKC-- 967
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
G+++ AR FD K++V W+A+ + Y
Sbjct: 968 -----------------------------GSLDLARCLFDETAGKDLVCWSAMIASYGIH 998
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
+ DL + V K GV + +L AC+ L GK
Sbjct: 999 GHGRKAIDLFDQMV-KAGVRPSHVTFTCVLSACSHSGLLEEGK----------------- 1040
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
Y +++ + F I R L Y M+ G +A+ L E M
Sbjct: 1041 --------------MYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENM---P 1083
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISP-ETDHYACMIDLYG---RANQ 544
++PDA + ++L A R ++++ EK + + + + P ++ + ++Y R N+
Sbjct: 1084 VEPDASIWGSLLGACRIHNNLDLAEKIADHL---FHLDPVHAGYHVLLSNIYAAKSRWNE 1140
Query: 545 LEKAIEFM 552
+EK + M
Sbjct: 1141 VEKVRKMM 1148
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 126/306 (41%), Gaps = 36/306 (11%)
Query: 274 NVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIV 333
N + ++HS V K G++ + F ++ + +Y KC
Sbjct: 16 NGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKC-------------------------- 49
Query: 334 GYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDAL 393
+++ AR+ FD NV +W + Y + + E L + G D
Sbjct: 50 -----ASLQAARKVFDETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNF 104
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMG-VQMDKKLISTLVDMYSKCGNMTYAEIIFQN 452
+ I L ACA L GK IH + + + D + S LV++YSKCG M A +F+
Sbjct: 105 TIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEE 164
Query: 453 FIERDLVLYNVMIACYAHHGHEEKAILLFEEM-LEKGIKPDAVTFVAILSAFRHCGSVEM 511
F D VL+ M+ Y + E+A+ LF +M + + D VT V+++SA +V+
Sbjct: 165 FQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKA 224
Query: 512 GEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVC 571
G + + + + +++LY + + A +P E VI S + C
Sbjct: 225 GS-CVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMP--EKDVISWSTMIAC 281
Query: 572 RLNRNA 577
N A
Sbjct: 282 YANNEA 287
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 129/546 (23%), Positives = 217/546 (39%), Gaps = 104/546 (19%)
Query: 74 QARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLN 133
+A LF P KD+V++ ++L GY G ++ +F M S + I+ D V L
Sbjct: 360 EAVDLFQRLPKKDVVSWVALLSGYAQ-NGMAYKSMGVFRNMLS--DGIQPDAVAVVKILA 416
Query: 134 LCVKLLNVGFGRQ---LHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
+L G +Q LH ++V++ +++ F +SLI++YSKC +A ++F+G
Sbjct: 417 ASSEL---GIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVR- 472
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWN-----TLISGYVQNGDAEEGLK 245
+++ ++M+AA G AL+ F Q N V N +++S G EEGLK
Sbjct: 473 DVVIWSSMIAAYGIHGRGGEALEIF-DQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLK 531
Query: 246 LFV-----------------------RMGENG----------VRWNEHTFASALSACCGL 272
+F R+G+ G + H + + L AC
Sbjct: 532 IFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIH 591
Query: 273 RNVKCAKEIHSWVLKNGLISNP------FVSSGIVDVYCKCENMNYAESMLLLKGVRNSF 326
N+ E+ KN +P + S I V K +N+ + + +G++ F
Sbjct: 592 HNI----EMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMF 647
Query: 327 SISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKE 386
S + V + + R H DS Q L L + KE
Sbjct: 648 GQSMVEVRGGVHSFLASDRFHPDS-------------------QKIYELLRKLEAQMGKE 688
Query: 387 GVVTDALILVILLGACALQ--------------AALHPG----------KEIHAYILRMG 422
+ D L+ GA LQ PG K+ HA I G
Sbjct: 689 VYIPDLDFLLHDTGA-VLQFWQRIKATESKYKTIGSAPGTDTISCFSCLKKTHAKIFAYG 747
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
+Q D ++++ MY + A I+F++ L+NVMI +A G ++ L+
Sbjct: 748 LQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYS 807
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRA 542
+M+EKG+KPD F L + ++ G K + S + A ++D+Y +
Sbjct: 808 KMMEKGLKPDKFAFPFALKSCAGLSDLQRG-KVIHQHLVCCGCSNDLFVDAALVDMYAKC 866
Query: 543 NQLEKA 548
+E A
Sbjct: 867 GDIEAA 872
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 116/271 (42%), Gaps = 74/271 (27%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTI 62
S NL+E H A+ G L + LI +Y K + E+ LF +P+++V SW +
Sbjct: 320 SRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVAL 379
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
+S + + +K + + +ML ++G + DA+ + + ++ E
Sbjct: 380 LSGYAQ-----------NGMAYKSMGVFRNML-----SDGIQPDAVAVVKILAASSE--- 420
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQ---LHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
+G +Q LH ++V++ +++ F +SLI++YSKC +A
Sbjct: 421 ------------------LGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDA 462
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
++F+G + D V W+++I+ Y +G
Sbjct: 463 VKLFKGMI---------------------------------VRDVVIWSSMIAAYGIHGR 489
Query: 240 AEEGLKLFVRMGENG-VRWNEHTFASALSAC 269
E L++F +M +N VR N TF S LSAC
Sbjct: 490 GGEALEIFDQMVKNSTVRPNNVTFLSILSAC 520
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 107/265 (40%), Gaps = 67/265 (25%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L+ + H + G + L+ +Y+K + +R +FD+M R++ SW ++IS
Sbjct: 833 DLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMIS 892
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
GY + GY ++ L F M+S+ + +
Sbjct: 893 -------------------------------GYAH-NGYNSETLGFFDLMRSSG--VIPN 918
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
++ S L C L + G H+++++T + ++++DMYSKC
Sbjct: 919 RVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKC----------- 967
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
G +++A + + + D V W+ +I+ Y +G + +
Sbjct: 968 ---------------------GSLDLA-RCLFDETAGKDLVCWSAMIASYGIHGHGRKAI 1005
Query: 245 KLFVRMGENGVRWNEHTFASALSAC 269
LF +M + GVR + TF LSAC
Sbjct: 1006 DLFDQMVKAGVRPSHVTFTCVLSAC 1030
>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Vitis vinifera]
Length = 590
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 184/587 (31%), Positives = 282/587 (48%), Gaps = 72/587 (12%)
Query: 84 HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGF 143
H + YN+++ Y ++ +A L + + D +T L C K L V
Sbjct: 67 HVGTLPYNTLIAAYASSCTPKAAFL---VYGRIVGNGFVPDMYTFPVVLKACTKFLGVQE 123
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
G Q+H VK + +SL+ YS C + A RVF+
Sbjct: 124 GEQVHGVAVKMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFD------------------- 164
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
EM ++ D VSW LISGYV+ G +E + LF++M V N TF
Sbjct: 165 -----EMLVR---------DVVSWTGLISGYVRTGLFDEAINLFLKMD---VVPNVATFV 207
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
S L AC + + K +H V K V + +VD+Y KCE +
Sbjct: 208 SVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYVKCECLC------------ 255
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV 383
EAR+ FD L ++++V WT++ SG V+ + + +L + +
Sbjct: 256 -------------------EARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYD-M 295
Query: 384 TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNM 443
GV D +IL +L ACA AL G+ + YI R G++ D + + LVDMY+KCG +
Sbjct: 296 QISGVEPDRIILTSVLSACASLGALDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCGCI 355
Query: 444 TYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAF 503
A IF R++ +N ++ A HGH +A+ FE M+ GI+P+ VTF+AIL+A
Sbjct: 356 EMALHIFNGIPNRNIFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTAC 415
Query: 504 RHCGSVEMGEKYFNSMTAD-YKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAV 562
H G V G YF M + + SP +HY CMIDL RA L++A +F++++P D +
Sbjct: 416 CHSGLVAEGRSYFYQMISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKFIRNMPLPPDVL 475
Query: 563 ILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMR 622
I G+ L+ C+ N N EL+ E LL L+ + YV L+N+YA W ++ R+R+ M+
Sbjct: 476 IWGALLSACKANGNVELSQEILSHLLELKSQDSGVYVLLSNIYATNERWDDVTRVRRLMK 535
Query: 623 GMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELY 669
+F G S + V+ E H F VGD +H + I+ +L I ++Y
Sbjct: 536 DKGIRKFPGSSVIEVDGEAHEFLVGDTNHSRNEDIHILLNILANQVY 582
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 148/348 (42%), Gaps = 43/348 (12%)
Query: 215 FWRQPELN-DAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLR 273
F Q +L+ + +NTLI+ Y + + ++ R+ NG + +TF L AC
Sbjct: 60 FLNQTDLHVGTLPYNTLIAAYASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFL 119
Query: 274 NVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIV 333
V+ +++H +K G + + +V + ++ Y C
Sbjct: 120 GVQEGEQVHGVAVKMGFLCDLYVQNSLLHFYSVC-------------------------- 153
Query: 334 GYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDAL 393
G A R FD + ++VV WT L SGYV+ LFD K VV +
Sbjct: 154 -----GKWGGAGRVFDEMLVRDVVSWTGLISGYVRT----GLFDEAINLFLKMDVVPNVA 204
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF 453
V +L AC L GK +H + + + + + LVDMY KC + A +F
Sbjct: 205 TFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYVKCECLCEARKLFDEL 264
Query: 454 IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMG- 512
+RD+V + +I+ + ++ LF +M G++PD + ++LSA G+++ G
Sbjct: 265 PDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIILTSVLSACASLGALDYGR 324
Query: 513 --EKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE 558
++Y ++ I T ++D+Y + +E A+ IP
Sbjct: 325 WVQEYIERQGIEWDIHIGT----ALVDMYAKCGCIEMALHIFNGIPNR 368
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 103/476 (21%), Positives = 188/476 (39%), Gaps = 112/476 (23%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
+ L ++E H A+K G N L+H YS + ++FDEM R
Sbjct: 117 KFLGVQEGEQVHGVAVKMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVR------- 169
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
D+V++ ++ GY+ G +A+ LF++M +
Sbjct: 170 ------------------------DVVSWTGLISGYVRT-GLFDEAINLFLKMD-----V 199
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+ T S L C ++ + G+ +H + K + ++L+DMY KC C EA +
Sbjct: 200 VPNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYVKCECLCEARK 259
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F+ + D VSW ++ISG VQ +
Sbjct: 260 LFDELPDR---------------------------------DIVSWTSIISGLVQCKQPK 286
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
+ L+LF M +GV + S LSAC L + + + ++ + G+ + + + +V
Sbjct: 287 DSLELFYDMQISGVEPDRIILTSVLSACASLGALDYGRWVQEYIERQGIEWDIHIGTALV 346
Query: 302 DVYCKCENMNYAESMLLLKGV--RNSFSISSMIVGYSLQGNMEEARRHFDSL----TEKN 355
D+Y KC + A + + G+ RN F+ ++++ G ++ G+ EA +HF+ + N
Sbjct: 347 DMYAKCGCIEMA--LHIFNGIPNRNIFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPN 404
Query: 356 VVVWTAL--------------------------FSGYVKAQNC-------EALFDLLSEF 382
V + A+ FS ++ C L D +F
Sbjct: 405 EVTFLAILTACCHSGLVAEGRSYFYQMISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKF 464
Query: 383 VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYS 438
+ + D LI LL AC + +EI +++L + Q D + L ++Y+
Sbjct: 465 IRNMPLPPDVLIWGALLSACKANGNVELSQEILSHLLELKSQ-DSGVYVLLSNIYA 519
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSK-CGNMTYA-EIIFQNFIERDLVLYNVMIACYA 469
K+IHA+++ G+ D+ ++S + + + K G + YA + + Q + + YN +IA YA
Sbjct: 22 KQIHAHLIASGLLHDEFVLSKVSEFFGKHIGFVDYAFDFLNQTDLHVGTLPYNTLIAAYA 81
Query: 470 HHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
+ A L++ ++ G PD TF +L A V+ GE+
Sbjct: 82 SSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQ 126
>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 175/569 (30%), Positives = 283/569 (49%), Gaps = 71/569 (12%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
++F N++++ + ++++AR +FD+ K +V++N+M+ GY G+ AL +F +M
Sbjct: 156 HLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMINGYFK-NGFANTALVVFNQM 214
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
D + +D +V S L C L + GR++H +V+ ++L+DMY+KC
Sbjct: 215 --VDSGVEIDGASVVSVLPACGYLKELEVGRRVHG-LVEEKVLGKKIVSNALVDMYAKCG 271
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
+EA VF+ E D VSW ++I+GY
Sbjct: 272 SMDEARLVFDNMVER---------------------------------DVVSWTSMINGY 298
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
+ NGDA+ L LF M G+R N T A L AC L N+K + +H WV+K L S
Sbjct: 299 ILNGDAKSALSLFKIMQIEGLRPNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEV 358
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
V + ++D+Y KC + SFS+ F + K
Sbjct: 359 AVETSLIDMYAKCNCLGL------------SFSV-------------------FTRTSRK 387
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
V W AL SG V + L + + EGV +A LL A + A L P I
Sbjct: 388 KTVPWNALLSGCVHNKLATEAIGLFKKMLM-EGVEINAATCNSLLPAYGILADLQPVNNI 446
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIE--RDLVLYNVMIACYAHHG 472
++Y++R G + ++ ++L+D+YSKCG++ A IF +D+ +++++IA Y HG
Sbjct: 447 NSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHG 506
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
H E A+ LF++M++ G+KP+ VTF ++L + H G V+ G F M D++ P DHY
Sbjct: 507 HGETAVSLFKQMVQSGVKPNDVTFTSVLQSCSHAGMVDDGLYLFKFMLKDHQTIPNDDHY 566
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
CM+DL GRA ++++A + +K++P + G+ L C ++ N EL A L LE
Sbjct: 567 TCMVDLLGRAGRMDEAYDLIKTMPFMPGHAVWGALLGACVMHENVELGEVAARWLFELEP 626
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQM 621
N YV LA +YAA G W + +R++M
Sbjct: 627 GNTGNYVLLAKLYAALGRWEDAENVRQRM 655
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 103/265 (38%), Gaps = 65/265 (24%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
NLK+ H +K L LI +Y+K N L S +F + WN ++S
Sbjct: 338 NLKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSFSVFTRTSRKKTVPWNALLS 397
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
C+ H L T +A+ LF +M E + ++
Sbjct: 398 GCV----------------HNKLAT----------------EAIGLFKKMLM--EGVEIN 423
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
T S L L ++ ++++++++ ++ +SLID+YSKC E A ++F
Sbjct: 424 AATCNSLLPAYGILADLQPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFN 483
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
+V D W+ +I+GY +G E +
Sbjct: 484 TIPVDV-------------------------------QDIFVWSIIIAGYGMHGHGETAV 512
Query: 245 KLFVRMGENGVRWNEHTFASALSAC 269
LF +M ++GV+ N+ TF S L +C
Sbjct: 513 SLFKQMVQSGVKPNDVTFTSVLQSC 537
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 89/225 (39%), Gaps = 49/225 (21%)
Query: 407 ALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIA 466
+L K++HA+++ G+ + + S LV Y+ CG + A +F +R +LYN MI
Sbjct: 36 SLTSTKQLHAHLITSGL-LSIDIRSVLVATYAHCGYVHNARKLFDELRQRGTLLYNFMIK 94
Query: 467 CYAHHGHEEKAILLFEEML-EKGIKPDAVTFV---------------------------- 497
Y G +A+ +F EML K PD T+
Sbjct: 95 MYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSELLLVEYGRVLHGLTLVSKFG 154
Query: 498 -------AILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY---GRANQLEK 547
++L+ + +CG VE K F++M +S T MI+ Y G AN
Sbjct: 155 SHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNT-----MINGYFKNGFANTALV 209
Query: 548 AIEFMKSIPTEEDAVILGSFLNVCRLNRNAELA----GEAEEKLL 588
M E D + S L C + E+ G EEK+L
Sbjct: 210 VFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHGLVEEKVL 254
>gi|125527050|gb|EAY75164.1| hypothetical protein OsI_03056 [Oryza sativa Indica Group]
Length = 669
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 189/617 (30%), Positives = 302/617 (48%), Gaps = 105/617 (17%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + G T + L++ Y ++E+ K+F+EM ER+V SW ++ISAC +
Sbjct: 144 HALVRRIGFTSDVFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSWTSMISACAQ---- 199
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
CG+ + LK+ EMQ+ E I ++ T+ S L
Sbjct: 200 ----------------------CGHWD------KVLKMLSEMQA--EGIIPNKVTIISLL 229
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C + V GR ++ + K +A ++LI MY+KC C +A F+
Sbjct: 230 SACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGCLSDALEAFQ-------- 281
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
AM A + SWNTLI G+VQN + +E L++F M
Sbjct: 282 ----AMPARYTK---------------------SWNTLIDGFVQNHEHKEALRIFEEMLL 316
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+GV + T S LSAC L ++ +HS++ NG+ + +++ ++++Y KC +M
Sbjct: 317 HGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAA 376
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
AE R F ++T+K+VV WT + GYVK
Sbjct: 377 AE-------------------------------RVFQTMTKKDVVSWTVMVCGYVKGHQF 405
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
F+L E E VV + LV LL AC+ AL G+EIH+YI M V D L S
Sbjct: 406 TMAFNLFEEMKIAE-VVAHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCLESA 464
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE-KGIKP 491
LVDMY+KCG + A IF+ + + +N MI A +G+ ++A+ LF++MLE + KP
Sbjct: 465 LVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKP 524
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
D +T A+L A H G V+ G +YF M++ + P+T+HY C++DL GRA L++A F
Sbjct: 525 DGITLKAVLGACAHVGMVDEGLRYFYLMSS-LGVVPDTEHYGCIVDLLGRAGMLDEAFHF 583
Query: 552 MKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNW 611
+K +P E + VI GS L CR++ +L + ++ + N+ +V ++N++A E W
Sbjct: 584 IKKMPIEPNPVIWGSLLAACRVHHRMDLGKVIGQHIVNVAPNDVGVHVLVSNLHAEESQW 643
Query: 612 AEMGRIRKQMRGMKGNR 628
++ + +RG+ G+R
Sbjct: 644 DDV----EHVRGLMGSR 656
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 117/502 (23%), Positives = 218/502 (43%), Gaps = 72/502 (14%)
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
++++ HD++ AR +FD + +N M+ GY + E DAL +F EM+
Sbjct: 57 ALLASPAARHDMRYARKVFDGMAQPNAFVWNCMIRGYSSCEA-PRDALAVFREMRR--RG 113
Query: 121 IRMDEFTVTSTLNLCVKLLNVGF---GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYE 177
+ D +T+ + ++ + + G +HA + + + F +S L++ Y R +
Sbjct: 114 VSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVK 173
Query: 178 EACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQN 237
EA +VFE E D VSW ++IS Q
Sbjct: 174 EASKVFEEMYER---------------------------------DVVSWTSMISACAQC 200
Query: 238 GDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVS 297
G ++ LK+ M G+ N+ T S LSAC + V + +++ V K G+ ++ +
Sbjct: 201 GHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIR 260
Query: 298 SGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVV 357
+ ++ +Y KC G + +A F ++ +
Sbjct: 261 NALISMYTKC-------------------------------GCLSDALEAFQAMPARYTK 289
Query: 358 VWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
W L G+V+ + + E + GV D + LV +L ACA L G +H+Y
Sbjct: 290 SWNTLIDGFVQNHEHKEALRIFEEMLL-HGVTPDGITLVSVLSACAQLGELRKGMHVHSY 348
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
I G+ D L ++L++MY+KCG+M AE +FQ ++D+V + VM+ Y A
Sbjct: 349 IKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMA 408
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID 537
LFEEM + + V++LSA G+++ G + +S + ++ + + ++D
Sbjct: 409 FNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGRE-IHSYIEEMNVAKDLCLESALVD 467
Query: 538 LYGRANQLEKAIEFMKSIPTEE 559
+Y + ++ A E + + ++
Sbjct: 468 MYAKCGCIDTASEIFRKMQHKQ 489
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 112/255 (43%), Gaps = 41/255 (16%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L++ + H G+ I TN LI++Y+K + + ++F M +++V SW ++
Sbjct: 339 LRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCG 398
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
+K H A +LF+ EM+ A+ + E
Sbjct: 399 YVKGHQFTMAFNLFE--------------------------------EMKIAE--VVAHE 424
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV-SSLIDMYSKCRCYEEACRVFE 184
+ S L+ C +L + GR++H++ ++ N A + S+L+DMY+KC C + A +F
Sbjct: 425 MALVSLLSACSQLGALDKGREIHSY-IEEMNVAKDLCLESALVDMYAKCGCIDTASEIFR 483
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN----DAVSWNTLISGYVQNGDA 240
+ L S NAM+ G + A++ F + EL D ++ ++ G
Sbjct: 484 KMQHKQTL-SWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMV 542
Query: 241 EEGLKLFVRMGENGV 255
+EGL+ F M GV
Sbjct: 543 DEGLRYFYLMSSLGV 557
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
Query: 395 LVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCG---NMTYAEIIFQ 451
L+ L ACA +A L E+H ++R + D + L+ + + +M YA +F
Sbjct: 20 LLAYLDACASRAHL---AELHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFD 76
Query: 452 NFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTF 496
+ + ++N MI Y+ A+ +F EM +G+ PD T
Sbjct: 77 GMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTM 121
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 182/646 (28%), Positives = 315/646 (48%), Gaps = 75/646 (11%)
Query: 28 TNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDL 87
T++L+ + + + +++ +M + N ++ I D A LF P+ +
Sbjct: 31 TDKLLSLLKQCTSTKSLQQIHTQMIINAIHKPNFLLHRFIDLKDFNNASLLFSQIPYPNE 90
Query: 88 VTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQL 147
+N M+ G ++ L + Q D IR + FT C LL + G+
Sbjct: 91 YAFNIMIRGLTTT--WQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACANLLVLNHGQCA 148
Query: 148 HAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGE 207
H+ ++K+ A G SLI MYS+C A RVF+ +E+
Sbjct: 149 HSGVLKSGLCADGHVRHSLITMYSRCGELGCARRVFDEISEK------------------ 190
Query: 208 MEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALS 267
D VSWN++ISGY + G A + + LF M + G +E T S L
Sbjct: 191 ---------------DLVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFEPDEMTLVSILG 235
Query: 268 ACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFS 327
AC L ++ I +V++N + N FV S ++ +Y KC
Sbjct: 236 ACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKC-------------------- 275
Query: 328 ISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC---EALFDLLSEFVT 384
G++ ARR FD + +K+VV W A+ +GY AQN EA+ +L +
Sbjct: 276 -----------GDLSSARRVFDRMVKKDVVTWNAMITGY--AQNGVSDEAI--ILFSGMR 320
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
+ GV D + LV +L ACA AL GK + Y G+Q D + + L+DMY+KCG++
Sbjct: 321 ESGVNPDKITLVGVLSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLD 380
Query: 445 YAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG--IKPDAVTFVAILSA 502
A +F++ +++ V +N MI+ A HG ++++ LF+ M ++G ++P+ ++F+ +LSA
Sbjct: 381 DALRVFEDMPQKNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSA 440
Query: 503 FRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAV 562
H G V+ G + F+ M++ + + P+ +H++CM+DL RA + +A +F++ +P + D V
Sbjct: 441 CVHAGLVDEGRQLFDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEV 500
Query: 563 ILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMR 622
+LG+ L C+ RN +++ LL +E N Y+ + ++A W + R+R MR
Sbjct: 501 VLGALLGACQKRRNVDVSERVMHMLLEMEPLNSGNYIISSKIFANMKRWDDSARMRVLMR 560
Query: 623 GMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
+ GCSW+ +E+++H F GDV H + + V+ + E+
Sbjct: 561 QRGVTKTPGCSWIEIENQVHEFHAGDVLHFISQDMCQVINLLNEEM 606
>gi|255542634|ref|XP_002512380.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548341|gb|EEF49832.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 736
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 162/494 (32%), Positives = 263/494 (53%), Gaps = 34/494 (6%)
Query: 169 MYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWN 228
MY KC + +A +VF+ + +S N MV+ R G+++ + F E N ++W
Sbjct: 1 MYFKCGVFSDAVKVFDDMPTR-DTVSWNTMVSGFLRNGDLDTGRQVFDEMLERN-VITWT 58
Query: 229 TLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKN 288
+ISG QN E+ L LFV+M + N T+ S+L+AC GL+ ++ ++IH V K
Sbjct: 59 AIISGLSQNEMYEDSLGLFVQMRCGLIEPNFLTYLSSLTACSGLQALEKGRQIHGLVWKL 118
Query: 289 GLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHF 348
G+ SN + S ++D+Y KC G++E+ARR F
Sbjct: 119 GIQSNLCIESALMDLYSKC-------------------------------GSLEDARRVF 147
Query: 349 DSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAAL 408
+S E + V T + G+ + E + + V G D ++ +LGAC + +L
Sbjct: 148 ESAVELDEVSMTVILVGFTQNGFEEEAIEFFVKMVNI-GTEVDPNMVSAVLGACGVDTSL 206
Query: 409 HPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACY 468
GK+IH+ +++ + + + + L++MYSKCG + + +F R+ V +N MIA +
Sbjct: 207 GLGKQIHSLVIKRSLGSNPFVGNGLINMYSKCGELQESIKVFNGLTCRNSVSWNSMIAAF 266
Query: 469 AHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE 528
A HG +A+ L+EEM+++G P +TF+++L A H G V+ G K+ SMT Y ISP
Sbjct: 267 ARHGDGFRALRLYEEMIQEGAVPTDLTFLSLLHACSHVGLVDKGMKFLKSMTKVYGISPR 326
Query: 529 TDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLL 588
+HYAC++D+ GRA L +A ++ + + D +I + L C + + E+ A E+LL
Sbjct: 327 AEHYACVVDMLGRAGLLNEAKSLIERLSIKPDVLIWQALLGACSIRGDTEIGKYAAEQLL 386
Query: 589 RLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGD 648
LE A YV LAN+Y+++G W E R K+M+ M + G SW+ +E ++H F V D
Sbjct: 387 LLEPKKPAPYVLLANIYSSKGRWDERARTIKRMKEMGVAKETGISWIEIEKKVHSFVVED 446
Query: 649 VSHPKTNAIYSVLA 662
HP+ IY VLA
Sbjct: 447 KKHPQAEIIYGVLA 460
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 121/456 (26%), Positives = 212/456 (46%), Gaps = 74/456 (16%)
Query: 34 IYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSM 93
+Y K + ++ K+FD+MP R+ SWNT++S +++ DL R +FD ++++T+ ++
Sbjct: 1 MYFKCGVFSDAVKVFDDMPTRDTVSWNTMVSGFLRNGDLDTGRQVFDEMLERNVITWTAI 60
Query: 94 LCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVK 153
+ G E YE D+L LF++M+ I + T S+L C L + GRQ+H + K
Sbjct: 61 ISGLSQNEMYE-DSLGLFVQMRCG--LIEPNFLTYLSSLTACSGLQALEKGRQIHGLVWK 117
Query: 154 TSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALK 213
++ S+L+D+YSKC E+A RVFE E
Sbjct: 118 LGIQSNLCIESALMDLYSKCGSLEDARRVFESAVEL------------------------ 153
Query: 214 TFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLR 273
D VS ++ G+ QNG EE ++ FV+M G + + ++ L AC
Sbjct: 154 ---------DEVSMTVILVGFTQNGFEEEAIEFFVKMVNIGTEVDPNMVSAVLGACGVDT 204
Query: 274 NVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGV--RNSFSISSM 331
++ K+IHS V+K L SNPFV +G++++Y KC + ES+ + G+ RNS S +SM
Sbjct: 205 SLGLGKQIHSLVIKRSLGSNPFVGNGLINMYSKCGELQ--ESIKVFNGLTCRNSVSWNSM 262
Query: 332 IVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTD 391
I ++ G+ A R L E + +EG V
Sbjct: 263 IAAFARHGDGFRALR--------------------------------LYEEMIQEGAVPT 290
Query: 392 ALILVILLGACALQAALHPGKEIHAYILRM-GVQMDKKLISTLVDMYSKCGNMTYAEIIF 450
L + LL AC+ + G + + ++ G+ + + +VDM + G + A+ +
Sbjct: 291 DLTFLSLLHACSHVGLVDKGMKFLKSMTKVYGISPRAEHYACVVDMLGRAGLLNEAKSLI 350
Query: 451 QNF-IERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
+ I+ D++++ ++ + G E E++L
Sbjct: 351 ERLSIKPDVLIWQALLGACSIRGDTEIGKYAAEQLL 386
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 115/283 (40%), Gaps = 56/283 (19%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H IK L N LI++YSK L+ES K+F+ + RN SWN++I+A + D
Sbjct: 213 HSLVIKRSLGSNPFVGNGLINMYSKCGELQESIKVFNGLTCRNSVSWNSMIAAFARHGD- 271
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
G+ AL+L+ EM E + T S L
Sbjct: 272 -----------------------------GFR--ALRLYEEM--IQEGAVPTDLTFLSLL 298
Query: 133 NLCVKLLNVGFGRQLHAFMVKT---SNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEE 189
+ C + V G + M K S A +A ++DM + EA + E + +
Sbjct: 299 HACSHVGLVDKGMKFLKSMTKVYGISPRAEHYAC--VVDMLGRAGLLNEAKSLIERLSIK 356
Query: 190 VNLISKNAMVAACCREGEMEM----ALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
+++ A++ AC G+ E+ A + +P+ + L + Y G +E +
Sbjct: 357 PDVLIWQALLGACSIRGDTEIGKYAAEQLLLLEPK--KPAPYVLLANIYSSKGRWDERAR 414
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKN 288
RM E GV + G+ ++ K++HS+V+++
Sbjct: 415 TIKRMKEMGV-----------AKETGISWIEIEKKVHSFVVED 446
>gi|297606175|ref|NP_001058069.2| Os06g0613100 [Oryza sativa Japonica Group]
gi|255677226|dbj|BAF19983.2| Os06g0613100 [Oryza sativa Japonica Group]
Length = 590
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 169/528 (32%), Positives = 264/528 (50%), Gaps = 66/528 (12%)
Query: 130 STLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEE 189
+ + C++ + GRQ+HA M+ + F + L+ MY +C ++A V +
Sbjct: 15 AAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLD----- 69
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
R PE VSW T+ISGY Q E L LF++
Sbjct: 70 ---------------------------RMPE-RSVVSWTTMISGYSQTERHVEALDLFIK 101
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
M G NE+T A+ L++C G +++ K++HS ++K S+ FV S ++D+Y K EN
Sbjct: 102 MLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSEN 161
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
+ EARR FD+L E++VV TA+ SGY +
Sbjct: 162 IQ-------------------------------EARRVFDTLPERDVVSCTAIISGYAQK 190
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
E DL + + EG+ + + L+ A + A+L GK++HA ILR + L
Sbjct: 191 GLDEEALDLFRQLYS-EGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVAL 249
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
++L+DMYSKCG + Y+ +F N +ER +V +N M+ Y HG + I LF++ L K +
Sbjct: 250 QNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKD-LHKEV 308
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
KPD+VT +A+LS H G V+ G F+++ + T HY C+IDL GR+ +LEKA+
Sbjct: 309 KPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKAL 368
Query: 550 EFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEG 609
++++P E I GS L CR++ N + +KLL +E N YV L+N+YAA G
Sbjct: 369 NLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAG 428
Query: 610 NWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
W ++ ++RK M + G SW+ ++ IH F + HP I
Sbjct: 429 MWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDI 476
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 190/425 (44%), Gaps = 86/425 (20%)
Query: 56 VFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQ 115
VF +++ ++ L AR++ D P + +V++ +M+ GY E + +AL LFI+M
Sbjct: 45 VFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERH-VEALDLFIKML 103
Query: 116 SADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRC 175
A +E+T+ + L C ++ G+Q+H+ +VKT+ ++ F SSL+DMY+K
Sbjct: 104 RAG--CIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSEN 161
Query: 176 YEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYV 235
+EA RVF+ E D VS +ISGY
Sbjct: 162 IQEARRVFDTLPER---------------------------------DVVSCTAIISGYA 188
Query: 236 QNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF 295
Q G EE L LF ++ G++ N TF + ++A GL ++ K++H+ +L+ L PF
Sbjct: 189 QKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKEL---PF 245
Query: 296 ---VSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
+ + ++D+Y KC + Y +RR FD++
Sbjct: 246 FVALQNSLIDMYSKCGKLLY-------------------------------SRRVFDNML 274
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
E++VV W A+ GY + + L + + V D++ L+ +L C+ + G
Sbjct: 275 ERSVVSWNAMLMGYGRHGLGHEVISLFKDL--HKEVKPDSVTLLAVLSGCSHGGLVDEGL 332
Query: 413 EIHAYILRMGVQMDKKLIST-----LVDMYSKCGNMTYAEIIFQN--FIERDLVLYNVMI 465
+I + V+ L+ T ++D+ + G + A + +N F + +++
Sbjct: 333 DIFDTV----VKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLG 388
Query: 466 ACYAH 470
AC H
Sbjct: 389 ACRVH 393
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 110/198 (55%), Gaps = 8/198 (4%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
E ++F ++++ KS ++++AR +FD+ P +D+V+ +++ GY +G + +AL LF
Sbjct: 143 ESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQ-KGLDEEALDLFR 201
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
++ S E ++ + T T+ + L ++ +G+Q+HA +++ +SLIDMYSK
Sbjct: 202 QLYS--EGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSK 259
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREG---EMEMALKTFWRQPELNDAVSWNT 229
C + RVF+ E +++S NAM+ R G E+ K ++ + D+V+
Sbjct: 260 CGKLLYSRRVFDNMLER-SVVSWNAMLMGYGRHGLGHEVISLFKDLHKEVK-PDSVTLLA 317
Query: 230 LISGYVQNGDAEEGLKLF 247
++SG G +EGL +F
Sbjct: 318 VLSGCSHGGLVDEGLDIF 335
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
H ++ L N LI +YSK L SR++FD M ER+V SWN ++
Sbjct: 235 HALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAML 285
>gi|356495448|ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 667
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 179/607 (29%), Positives = 297/607 (48%), Gaps = 37/607 (6%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
V + ++S C++ DL+ A LFD P + YN ++ GY N+ +L LF +M
Sbjct: 70 QVVTLGKLLSLCVQEGDLRYAHLLFDQIPQPNKFMYNHLIRGYSNSND-PMKSLLLFRQM 128
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
SA ++FT L C +HA +K ++++ Y CR
Sbjct: 129 VSAGP--MPNQFTFPFVLKACAAKPFYWEAVIVHAQAIKLGMGPHACVQNAILTAYVACR 186
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
A +VF+ ++ VSWN++I+GY
Sbjct: 187 LILSARQVFDDISDRT---------------------------------IVSWNSMIAGY 213
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
+ G +E + LF M + GV + T S LSA N+ + +H +++ G+ +
Sbjct: 214 SKMGFCDEAILLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLGRFVHLYIVITGVEIDS 273
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
V++ ++D+Y KC ++ +A+ + ++ S +SM+ Y+ QG +E A + F+ + K
Sbjct: 274 IVTNALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLVENAVQIFNHMPVK 333
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
NVV W ++ V+ +L GV+ D LV +L C+ L GK+
Sbjct: 334 NVVSWNSIICCLVQEGQYTEAVELFHRMCI-SGVMPDDATLVSILSCCSNTGDLALGKQA 392
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
H YI + + L ++L+DMY+KCG + A IF E+++V +NV+I A HG
Sbjct: 393 HCYICDNIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMPEKNVVSWNVIIGALALHGFG 452
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC 534
E+AI +F+ M G+ PD +TF +LSA H G V+MG YF+ M + ++ISP +HYAC
Sbjct: 453 EEAIEMFKSMQASGLYPDEITFTGLLSACSHSGLVDMGRYYFDIMISTFRISPGVEHYAC 512
Query: 535 MIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNN 594
M+DL GR L +A+ ++ +P + D V+ G+ L CR+ N E+A + ++LL L N
Sbjct: 513 MVDLLGRGGFLGEAMTLIQKMPVKPDVVVWGALLGACRIYGNLEIAKQIMKQLLELGRFN 572
Query: 595 KARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKT 654
YV L+N+Y+ W +M +IRK M + S++ ++ + F V D H +
Sbjct: 573 SGLYVLLSNMYSESQRWDDMKKIRKIMDDSGIKKCRAISFIEIDGCCYQFMVDDKRHCAS 632
Query: 655 NAIYSVL 661
IYS+L
Sbjct: 633 TGIYSIL 639
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 129/538 (23%), Positives = 222/538 (41%), Gaps = 106/538 (19%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
++K + H Q I GL +T +L+ + + LR + LFD++P+ N F +N +I
Sbjct: 51 SMKRLKLVHAQIILHGLAAQVVTLGKLLSLCVQEGDLRYAHLLFDQIPQPNKFMYNHLIR 110
Query: 65 ACIKSHDLKQA----RSLFDSSPHKDLVTYNSML--CG----YINAEGYEADALKL---- 110
S+D ++ R + + P + T+ +L C Y A A A+KL
Sbjct: 111 GYSNSNDPMKSLLLFRQMVSAGPMPNQFTFPFVLKACAAKPFYWEAVIVHAQAIKLGMGP 170
Query: 111 ------------------------------------------FIEMQSADEHIRM----- 123
+ +M DE I +
Sbjct: 171 HACVQNAILTAYVACRLILSARQVFDDISDRTIVSWNSMIAGYSKMGFCDEAILLFQEML 230
Query: 124 ------DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYE 177
D FT+ S L+ K N+ GR +H ++V T + ++LIDMY+KC +
Sbjct: 231 QLGVEADVFTLVSLLSASSKHCNLDLGRFVHLYIVITGVEIDSIVTNALIDMYAKCGHLQ 290
Query: 178 EACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQN 237
A VF+ ++ +++S +MV A +G +E A++ F P + + VSWN++I VQ
Sbjct: 291 FAKHVFDQMLDK-DVVSWTSMVNAYANQGLVENAVQIFNHMP-VKNVVSWNSIICCLVQE 348
Query: 238 GDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVS 297
G E ++LF RM +GV ++ T S LS C ++ K+ H ++ N + + +
Sbjct: 349 GQYTEAVELFHRMCISGVMPDDATLVSILSCCSNTGDLALGKQAHCYICDNIITVSVTLC 408
Query: 298 SGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVV 357
+ ++D+Y KC + A + +N S + +I +L G EEA F S+ +
Sbjct: 409 NSLIDMYAKCGALQTAIDIFFGMPEKNVVSWNVIIGALALHGFGEEAIEMFKSMQASGLY 468
Query: 358 VWTALFSGYVKAQNCEALFD--------LLSEF--------------------------- 382
F+G + A + L D ++S F
Sbjct: 469 PDEITFTGLLSACSHSGLVDMGRYYFDIMISTFRISPGVEHYACMVDLLGRGGFLGEAMT 528
Query: 383 -VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
+ K V D ++ LLGAC + L K+I +L +G + + L L +MYS+
Sbjct: 529 LIQKMPVKPDVVVWGALLGACRIYGNLEIAKQIMKQLLELG-RFNSGLYVLLSNMYSE 585
>gi|357136755|ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Brachypodium distachyon]
Length = 805
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 199/699 (28%), Positives = 330/699 (47%), Gaps = 94/699 (13%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKL--------FDEMPE 53
RS EAL + ++ GL T T ++ L + R+ DE
Sbjct: 117 RSERAGEALELYEGMLREGLVPTHFTLASVLSACGAVAALDDGRRCHGLAVKVGLDE--- 173
Query: 54 RNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIE 113
N+F N ++ K ++ A LFD + V++ +M+ G + A G DAL+LF
Sbjct: 174 -NLFVENALLGMYTKCGGVEDAVRLFDGMASPNEVSFTAMMGGLVQA-GSVDDALRLFAR 231
Query: 114 MQSADEHIRMDEFTVTSTLNLCVKLLNVGF--------GRQLHAFMVKTSNDASGFAVSS 165
M +R+D V+S L C + F G+ +HA +V+ + +S
Sbjct: 232 M--CRSGVRVDPVAVSSVLGSCAQACASEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNS 289
Query: 166 LIDMYSKCRCYEEACRVFEGCT----------------------------------EEVN 191
LIDMY+KC +EA +VF+ E N
Sbjct: 290 LIDMYTKCMQMDEAVKVFDSLPNISTVSWNILITGFGQAGSYAKALEVLNLMEESGSEPN 349
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
++ + M+A+C + ++ ++ + + + +WNTL+SGY Q ++ ++LF RM
Sbjct: 350 EVTYSNMLASCIKARDV-LSARAMFDKISRPSVTTWNTLLSGYCQEELHQDTVELFRRMQ 408
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
V+ + T A LS+C L + ++HS ++ L ++ FV+SG+VD+Y KC
Sbjct: 409 HQNVQPDRTTLAVILSSCSRLGILDLGTQVHSASVRFLLHNDMFVASGLVDMYSKC---- 464
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
G + AR F+ +TE++VV W ++ SG
Sbjct: 465 ---------------------------GQIGIARIIFNRMTERDVVCWNSMISGLAIHSL 497
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
E FD + + G++ ++ +CA +++ G++IHA I++ G + + S
Sbjct: 498 NEEAFDFFKQ-MRGNGMMPTESSYASMINSCARLSSVPQGRQIHAQIVKDGYDQNVYVGS 556
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
L+DMY+KCGNM A + F + +++V +N MI YA +G EKA+ LFE ML +P
Sbjct: 557 ALIDMYAKCGNMDDARVFFDCMVTKNIVAWNEMIHGYAQNGFGEKAVDLFEYMLTTEQRP 616
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
D VTF+A+L+ H G V+ +FNSM + Y I+P +HY C+ID GRA +L +
Sbjct: 617 DGVTFIAVLTGCSHSGLVDEAIAFFNSMESTYGITPLAEHYTCLIDGLGRAGRLVEVEAL 676
Query: 552 MKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNW 611
+ ++P ++D ++ L C ++ NAEL A + L RL+ N + YV L+N+YA+ G
Sbjct: 677 IDNMPCKDDPIVWEVLLAACAVHHNAELGECAAKHLFRLDPKNPSPYVLLSNIYASLGRH 736
Query: 612 AEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGD 648
+ +R M RG+ R G SW+ + +H F V D
Sbjct: 737 GDASGVRALMSSRGVVKGR--GYSWIDHKDGVHAFMVAD 773
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 151/589 (25%), Positives = 270/589 (45%), Gaps = 89/589 (15%)
Query: 17 IKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQAR 76
+ AGL T N+L+ +YS L ++ + F +P N +S+N +SA ++ DL AR
Sbjct: 35 LAAGLGADTFLINRLVELYSVSGLPCDALRAFRSLPRPNAYSYNAALSAARRAGDLDAAR 94
Query: 77 SLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCV 136
+L D P +++V++N+++ +E +AL+L+ M E + FT+ S L+ C
Sbjct: 95 ALLDEMPDRNVVSWNTVIAALARSE-RAGEALELYEGMLR--EGLVPTHFTLASVLSACG 151
Query: 137 KLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKN 196
+ + GR+ H VK D + F ++L+ MY+KC E+A R+F+G N +S
Sbjct: 152 AVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMASP-NEVSFT 210
Query: 197 AMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVR 256
AM+ + G + ++ L+LF RM +GVR
Sbjct: 211 AMMGGLVQAGSV--------------------------------DDALRLFARMCRSGVR 238
Query: 257 WNEHTFASALSAC---CG-----LRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
+ +S L +C C +R + + IH+ +++ G S+ V + ++D+Y KC
Sbjct: 239 VDPVAVSSVLGSCAQACASEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCM 298
Query: 309 NMNYAESMLLLKGVRNSFSIS--SMIVGYSLQGN----------MEE------------- 343
M+ E++ + + N ++S +I G+ G+ MEE
Sbjct: 299 QMD--EAVKVFDSLPNISTVSWNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNM 356
Query: 344 ------------ARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTD 391
AR FD ++ +V W L SGY + + + +L + + V D
Sbjct: 357 LASCIKARDVLSARAMFDKISRPSVTTWNTLLSGYCQEELHQDTVELFRR-MQHQNVQPD 415
Query: 392 ALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQ 451
L ++L +C+ L G ++H+ +R + D + S LVDMYSKCG + A IIF
Sbjct: 416 RTTLAVILSSCSRLGILDLGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARIIFN 475
Query: 452 NFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEM 511
ERD+V +N MI+ A H E+A F++M G+ P ++ +++++ SV
Sbjct: 476 RMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCARLSSVPQ 535
Query: 512 GEKYFNSMTADYKISPETDHY--ACMIDLYGRANQLEKAIEFMKSIPTE 558
G + + D + + Y + +ID+Y + ++ A F + T+
Sbjct: 536 GRQIHAQIVKD---GYDQNVYVGSALIDMYAKCGNMDDARVFFDCMVTK 581
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 186/425 (43%), Gaps = 50/425 (11%)
Query: 158 ASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWR 217
A F ++ L+++YS +A R F N S NA ++A R G+++ A
Sbjct: 41 ADTFLINRLVELYSVSGLPCDALRAFRSLPRP-NAYSYNAALSAARRAGDLDAARALLDE 99
Query: 218 QPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKC 277
P+ N VSWNT+I+ ++ A E L+L+ M G+ T AS LSAC + +
Sbjct: 100 MPDRN-VVSWNTVIAALARSERAGEALELYEGMLREGLVPTHFTLASVLSACGAVAALDD 158
Query: 278 AKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSL 337
+ H +K GL N FV + ++ +Y KC
Sbjct: 159 GRRCHGLAVKVGLDENLFVENALLGMYTKC------------------------------ 188
Query: 338 QGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVI 397
G +E+A R FD + N V +TA+ G V+A + + L + + + GV D + +
Sbjct: 189 -GGVEDAVRLFDGMASPNEVSFTAMMGGLVQAGSVDDALRLFAR-MCRSGVRVDPVAVSS 246
Query: 398 LLGACA--------LQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEII 449
+LG+CA + A G+ IHA I+R G D+ + ++L+DMY+KC M A +
Sbjct: 247 VLGSCAQACASEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKV 306
Query: 450 FQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSV 509
F + V +N++I + G KA+ + M E G +P+ VT+ +L++ V
Sbjct: 307 FDSLPNISTVSWNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLASCIKARDV 366
Query: 510 EMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIP---TEEDAVILGS 566
F+ ++ P + ++ Y + + +E + + + D L
Sbjct: 367 LSARAMFDKIS-----RPSVTTWNTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAV 421
Query: 567 FLNVC 571
L+ C
Sbjct: 422 ILSSC 426
>gi|297828580|ref|XP_002882172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328012|gb|EFH58431.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 638
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 178/649 (27%), Positives = 317/649 (48%), Gaps = 81/649 (12%)
Query: 16 AIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQA 75
A+KA L + ++IH + K N+ S +++ +++I +K + +A
Sbjct: 47 ALKACGELREVKYGEMIHGFLKKNVTLGS----------DLYVGSSLIYMYVKCGRMTEA 96
Query: 76 RSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLC 135
+F+ D+VT++SM+ G+ G A++ F M +A + + D T+ + ++ C
Sbjct: 97 LRMFNELEKPDIVTWSSMVSGF-EKNGSPYQAVEFFRRMATASD-VTPDRVTLITLVSAC 154
Query: 136 VKLLNVGFGRQLHAFMVKT--SNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLI 193
KL N GR +H F+++ SND S V+SL++ Y+K R ++EA +F+ E+
Sbjct: 155 TKLSNSRLGRCVHGFVMRRGFSNDLS--LVNSLLNCYAKSRAFKEAVNLFKMMAEK---- 208
Query: 194 SKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGEN 253
D +SW+T+I+ YVQNG A E L++F M ++
Sbjct: 209 -----------------------------DVISWSTVIACYVQNGAAAEALRVFNEMIDD 239
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA 313
G N T L AC +++ ++ H ++ GL + VS+ +VD+Y KC
Sbjct: 240 GTEPNVATVLCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKC------ 293
Query: 314 ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE 373
FS EEA F + +K+VV W AL SG+
Sbjct: 294 ------------FSP-------------EEAYAVFSRIPKKDVVSWVALISGFTLNGMAH 328
Query: 374 ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL 433
+ S + + DA++++ +LG+C+ L + H+Y+++ G + + ++L
Sbjct: 329 RSIEEFSIMLLENNTRPDAILMLKVLGSCSELGFLKQAECFHSYVIKYGFDSNPFIGASL 388
Query: 434 VDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG-IKPD 492
V++YS+CG++ A +F +D V++ +I Y HG KA+ F M+ +KP+
Sbjct: 389 VELYSRCGSLGNASKVFNEIALKDTVVWTSLITGYGIHGKGTKALETFNHMVRSSEVKPN 448
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
VTF++ILSA H G + G + F M DY+++P +HYA ++DL GR +L+ AIE
Sbjct: 449 EVTFLSILSACSHAGLIHEGLRIFELMVNDYRLAPNLEHYAVLVDLLGRVGELDTAIEIT 508
Query: 553 KSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWA 612
K +P ILG+ L CR+++N E+A ++L LE N+ Y+ ++N+Y +G W
Sbjct: 509 KRMPFSPTPQILGTLLGACRIHQNGEMAETVAKQLFELESNHAGYYMLMSNMYGVKGEWE 568
Query: 613 EMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+ ++R ++ + S + + ++H F D HP+ +Y +L
Sbjct: 569 NVEKLRNSVKQRGIKKGLAESLIEIRRKVHKFVADDDLHPEKEPVYGLL 617
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 189/418 (45%), Gaps = 46/418 (11%)
Query: 227 WNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVL 286
WNTL+ ++ E+ + F +M + + + T AL AC LR VK + IH ++
Sbjct: 9 WNTLLKSLSRDKHWEQVMCHFSQMFRDEEKPDNFTLPVALKACGELREVKYGEMIHGFLK 68
Query: 287 KN-GLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEAR 345
KN L S+ +V S ++ +Y KC G M EA
Sbjct: 69 KNVTLGSDLYVGSSLIYMYVKC-------------------------------GRMTEAL 97
Query: 346 RHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQ 405
R F+ L + ++V W+++ SG+ K + + T V D + L+ L+ AC
Sbjct: 98 RMFNELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMATASDVTPDRVTLITLVSACTKL 157
Query: 406 AALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMI 465
+ G+ +H +++R G D L+++L++ Y+K A +F+ E+D++ ++ +I
Sbjct: 158 SNSRLGRCVHGFVMRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVI 217
Query: 466 ACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKI 525
ACY +G +A+ +F EM++ G +P+ T + +L A +E G K + + +
Sbjct: 218 ACYVQNGAAAEALRVFNEMIDDGTEPNVATVLCVLQACAAANDLEQGRKT-HELAIRKGL 276
Query: 526 SPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEE 585
E ++D+Y + E+A IP ++D V + ++ LN A + E E
Sbjct: 277 ETEVKVSTALVDMYMKCFSPEEAYAVFSRIP-KKDVVSWVALISGFTLNGMAHRSIE-EF 334
Query: 586 KLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQ--------MRGMKGNRFAGCSWV 635
++ LE N + + + V G+ +E+G +++ G N F G S V
Sbjct: 335 SIMLLENNTRPDAILMLKVL---GSCSELGFLKQAECFHSYVIKYGFDSNPFIGASLV 389
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/469 (23%), Positives = 190/469 (40%), Gaps = 108/469 (23%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H ++ G + N L++ Y+K +E+ LF M E++V SW+T+I+ +++
Sbjct: 167 HGFVMRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQN--- 223
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
G A+AL++F EM D+ + TV L
Sbjct: 224 -----------------------------GAAAEALRVFNEM--IDDGTEPNVATVLCVL 252
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C ++ GR+ H ++ + ++L+DMY KC EEA VF
Sbjct: 253 QACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFS-------- 304
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF-VRMG 251
R P+ D VSW LISG+ NG A ++ F + +
Sbjct: 305 ------------------------RIPK-KDVVSWVALISGFTLNGMAHRSIEEFSIMLL 339
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
EN R + L +C L +K A+ HS+V+K G SNPF+ + +V++Y +C
Sbjct: 340 ENNTRPDAILMLKVLGSCSELGFLKQAECFHSYVIKYGFDSNPFIGASLVELYSRC---- 395
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY-VKAQ 370
G++ A + F+ + K+ VVWT+L +GY + +
Sbjct: 396 ---------------------------GSLGNASKVFNEIALKDTVVWTSLITGYGIHGK 428
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL---RMGVQMDK 427
+AL + + V V + + + +L AC+ +H G I ++ R+ ++
Sbjct: 429 GTKAL-ETFNHMVRSSEVKPNEVTFLSILSACSHAGLIHEGLRIFELMVNDYRLAPNLEH 487
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQN--FIERDLVLYNVMIACYAHHGHE 474
+ LVD+ + G + A I + F +L ++ AC H E
Sbjct: 488 --YAVLVDLLGRVGELDTAIEITKRMPFSPTPQILGTLLGACRIHQNGE 534
>gi|347954470|gb|AEP33735.1| chlororespiratory reduction 21, partial [Olimarabidopsis pumila]
Length = 811
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 195/706 (27%), Positives = 332/706 (47%), Gaps = 114/706 (16%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H IKAGL + L +Y K +L ++RK+FDE+PERNV +W
Sbjct: 176 HGYVIKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAW------------- 222
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
N+++ GY+ G +A++LF +M+ E + TV++ L
Sbjct: 223 ------------------NALMVGYVQ-NGMNEEAIRLFSDMRK--EGVEPTRVTVSTCL 261
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ ++ V G+Q HA + + +SL++ Y
Sbjct: 262 SASANMVGVEEGKQSHAIAIVNGLELDNILGTSLLNFY---------------------- 299
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
C+ G +E A F R + D V+WN LISGYVQ G E+ + + M
Sbjct: 300 ----------CKVGLIEYAEMVFDRMFD-KDVVTWNLLISGYVQQGLVEDAIYMSQLMRL 348
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM-- 310
++++ T ++ +SA N+K KE+ + +++ L ++ ++S +D+Y KC ++
Sbjct: 349 EKLKYDCVTLSTLMSAAARTENLKFGKEVQCYCIRHSLDTDIVLASTTMDMYAKCGSIVD 408
Query: 311 ---------------------NYAESMLLLKGVRNSF-----SISSMIVGYSL------- 337
YA+S L + +R + S+ ++ ++L
Sbjct: 409 AKKVFDSTVEKDLILWNTLLAAYAQSGLSGEALRLFYEMQLESVPPNVITWNLIILSLLR 468
Query: 338 QGNMEEARRHF----DSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDAL 393
G + EA+ F S N++ WT + +G V+ C L + + G+ +A
Sbjct: 469 NGEVNEAKEMFLQMQSSGISPNLISWTTMMNGMVQ-NGCSEEAILFLRKMQESGLRPNAF 527
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST-LVDMYSKCGNMTYAEIIFQN 452
+ + L A A A+LH G+ IH YI+R I T LVDMY+KCG++ AE +F +
Sbjct: 528 SITVALSASANLASLHFGRSIHGYIIRNLRHSSSVSIETSLVDMYAKCGDINKAERVFGS 587
Query: 453 FIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMG 512
+ +L LYN MI+ YA +G+ ++AI L+ + + GIKPD+VTF ++LSA H G ++
Sbjct: 588 KLYSELPLYNAMISAYALYGNVKEAIALYRSLEDMGIKPDSVTFTSLLSACNHAGDIDQA 647
Query: 513 EKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCR 572
F +M + ++P +HY M+DL A + EKAI ++ +P + DA ++ S + C
Sbjct: 648 VGVFTAMVLKHGMTPCLEHYGLMVDLLASAGETEKAIRLIEEMPYKPDARMIQSLVASCN 707
Query: 573 LNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGC 632
EL LL E N YV ++N YA EG+W E+ ++R+ M+ + GC
Sbjct: 708 KQHKTELVEYLSRHLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGC 767
Query: 633 SWVYVEHE---IHIFTVGDVSHPKTNAIYSVLAIFTGELYEIAGAF 675
SW+ ++ E +H+F D +H + + I +LA+ LY++ F
Sbjct: 768 SWIQIKGEEEGVHVFVANDXTHIRNDXIQRILALL---LYDMCSDF 810
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 153/553 (27%), Positives = 248/553 (44%), Gaps = 104/553 (18%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLV 88
+L+ Y+K + L + +F ++ RNVFSW II V
Sbjct: 91 TKLVIFYAKCDALEXAEVIFSKLRVRNVFSWAAIIG-----------------------V 127
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLH 148
LC EG AL F+EM + I D F V + C L FGR +H
Sbjct: 128 KCRIGLC-----EG----ALMGFVEM--LENEIFPDNFVVPNVCKACGALQWSRFGRGVH 176
Query: 149 AFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEM 208
+++K + F SSL DMY KC ++A +VF+ E N+++ NA
Sbjct: 177 GYVIKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPER-NVVAWNA----------- 224
Query: 209 EMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSA 268
L+ GYVQNG EE ++LF M + GV T ++ LSA
Sbjct: 225 ---------------------LMVGYVQNGMNEEAIRLFSDMRKEGVEPTRVTVSTCLSA 263
Query: 269 CCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSI 328
+ V+ K+ H+ + NGL + + + +++ YCK + YAE +
Sbjct: 264 SANMVGVEEGKQSHAIAIVNGLELDNILGTSLLNFYCKVGLIEYAEMV------------ 311
Query: 329 SSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE-ALFDLLSEFVTKEG 387
FD + +K+VV W L SGYV+ E A++ +S+ + E
Sbjct: 312 -------------------FDRMFDKDVVTWNLLISGYVQQGLVEDAIY--MSQLMRLEK 350
Query: 388 VVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAE 447
+ D + L L+ A A L GKE+ Y +R + D L ST +DMY+KCG++ A+
Sbjct: 351 LKYDCVTLSTLMSAAARTENLKFGKEVQCYCIRHSLDTDIVLASTTMDMYAKCGSIVDAK 410
Query: 448 IIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCG 507
+F + +E+DL+L+N ++A YA G +A+ LF EM + + P+ +T+ I+ + G
Sbjct: 411 KVFDSTVEKDLILWNTLLAAYAQSGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNG 470
Query: 508 SVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSF 567
V ++ F M + ISP + M++ + E+AI F++ + +E + +F
Sbjct: 471 EVNEAKEMFLQMQSS-GISPNLISWTTMMNGMVQNGCSEEAILFLRKM--QESGLRPNAF 527
Query: 568 LNVCRLNRNAELA 580
L+ +A LA
Sbjct: 528 SITVALSASANLA 540
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 130/537 (24%), Positives = 239/537 (44%), Gaps = 92/537 (17%)
Query: 4 LNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
+ ++E H AI GL L I L++ Y K L+ + +FD M +++V +WN +I
Sbjct: 268 VGVEEGKQSHAIAIVNGLELDNILGTSLLNFYCKVGLIEYAEMVFDRMFDKDVVTWNLLI 327
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
S GY+ +G DA+ + M+ E ++
Sbjct: 328 S-------------------------------GYVQ-QGLVEDAIYMSQLMRL--EKLKY 353
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
D T+++ ++ + N+ FG+++ + ++ S D S+ +DMY+KC +A +VF
Sbjct: 354 DCVTLSTLMSAAARTENLKFGKEVQCYCIRHSLDTDIVLASTTMDMYAKCGSIVDAKKVF 413
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFW----------------------RQPEL 221
+ E+ +LI N ++AA + G AL+ F+ R E+
Sbjct: 414 DSTVEK-DLILWNTLLAAYAQSGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGEV 472
Query: 222 NDA----------------VSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASA 265
N+A +SW T+++G VQNG +EE + +M E+G+R N + A
Sbjct: 473 NEAKEMFLQMQSSGISPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVA 532
Query: 266 LSACCGLRNVKCAKEIHSWVLKNGLISNPF-VSSGIVDVYCKCENMNYAESMLLLKGVRN 324
LSA L ++ + IH ++++N S+ + + +VD+Y KC ++N AE + K
Sbjct: 533 LSASANLASLHFGRSIHGYIIRNLRHSSSVSIETSLVDMYAKCGDINKAERVFGSKLYSE 592
Query: 325 SFSISSMIVGYSLQGNMEEARRHFDSLTEKNV----VVWTALFSGYVKAQNCEALFDLLS 380
++MI Y+L GN++EA + SL + + V +T+L S A + + + +
Sbjct: 593 LPLYNAMISAYALYGNVKEAIALYRSLEDMGIKPDSVTFTSLLSACNHAGDIDQAVGVFT 652
Query: 381 EFVTKEGVVT----DALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDM 436
V K G+ L++ +L A + A+ I M + D ++I +LV
Sbjct: 653 AMVLKHGMTPCLEHYGLMVDLLASAGETEKAIR-------LIEEMPYKPDARMIQSLVAS 705
Query: 437 YSKCGNMTYAEIIFQNFIERDLV---LYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+K E + ++ +E + Y + YA G ++ + + E M KG+K
Sbjct: 706 CNKQHKTELVEYLSRHLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLK 762
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 125/286 (43%), Gaps = 34/286 (11%)
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG- 289
+S +NG+ +E L L M R + L C R++ K+IH+ +LKNG
Sbjct: 22 VSSLCKNGEIKEALSLVTEMDFRNXRIGPEIYGEXLQGCVYERDLSTGKQIHARILKNGD 81
Query: 290 -LISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHF 348
N ++ + +V Y KC+ + AE + F
Sbjct: 82 FYARNEYIETKLVIFYAKCDALEXAEVI-------------------------------F 110
Query: 349 DSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAAL 408
L +NV W A+ + CE E + E + D ++ + AC
Sbjct: 111 SKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENE-IFPDNFVVPNVCKACGALQWS 169
Query: 409 HPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACY 468
G+ +H Y+++ G++ + S+L DMY KCG + A +F ER++V +N ++ Y
Sbjct: 170 RFGRGVHGYVIKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGY 229
Query: 469 AHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
+G E+AI LF +M ++G++P VT LSA + VE G++
Sbjct: 230 VQNGMNEEAIRLFSDMRKEGVEPTRVTVSTCLSASANMVGVEEGKQ 275
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 138/291 (47%), Gaps = 45/291 (15%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R+ NLK I+ L + + + +Y+K + +++K+FD E+++ WNT
Sbjct: 367 RTENLKFGKEVQCYCIRHSLDTDIVLASTTMDMYAKCGSIVDAKKVFDSTVEKDLILWNT 426
Query: 62 IISACIKSHDLKQARSLF-----DSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQS 116
+++A +S +A LF +S P +++T+N ++ + G +A ++F++MQS
Sbjct: 427 LLAAYAQSGLSGEALRLFYEMQLESVP-PNVITWNLIILSLLR-NGEVNEAKEMFLQMQS 484
Query: 117 A---------------------------------DEHIRMDEFTVTSTLNLCVKLLNVGF 143
+ + +R + F++T L+ L ++ F
Sbjct: 485 SGISPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSASANLASLHF 544
Query: 144 GRQLHAFMVKTSNDASGFAV-SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAAC 202
GR +H ++++ +S ++ +SL+DMY+KC +A RVF G L NAM++A
Sbjct: 545 GRSIHGYIIRNLRHSSSVSIETSLVDMYAKCGDINKAERVF-GSKLYSELPLYNAMISAY 603
Query: 203 CREGEMEMALKTFWRQPELN---DAVSWNTLISGYVQNGDAEEGLKLFVRM 250
G ++ A+ + ++ D+V++ +L+S GD ++ + +F M
Sbjct: 604 ALYGNVKEAIALYRSLEDMGIKPDSVTFTSLLSACNHAGDIDQAVGVFTAM 654
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 11/164 (6%)
Query: 399 LGACALQAALHPGKEIHAYILRMG--VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER 456
L C + L GK+IHA IL+ G ++ + + LV Y+KC + AE+IF R
Sbjct: 57 LQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEXAEVIFSKLRVR 116
Query: 457 DLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYF 516
++ + +I G E A++ F EMLE I PD FV + + + CG+++ F
Sbjct: 117 NVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPD--NFV-VPNVCKACGALQWSR--F 171
Query: 517 NSMTADYKISPETDH----YACMIDLYGRANQLEKAIEFMKSIP 556
Y I + + + D+YG+ L+ A + IP
Sbjct: 172 GRGVHGYVIKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIP 215
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 164/536 (30%), Positives = 268/536 (50%), Gaps = 37/536 (6%)
Query: 143 FGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAAC 202
G Q+HA M+ + S ++ Y+ + + VF G E +L+
Sbjct: 88 LGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGEPSSLL--------- 138
Query: 203 CREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTF 262
+N++I Y + G AE + + M G + TF
Sbjct: 139 ------------------------FNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTF 174
Query: 263 ASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGV 322
L + L +V K +H +L+ GL + +V++ ++ +Y KC +N A + +
Sbjct: 175 PFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTI 234
Query: 323 RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF 382
R+ S ++++ GY+ G ++ A F+ + +N+V WT + SGY ++ + L E
Sbjct: 235 RDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEM 294
Query: 383 VTKE-GVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
V ++ GV + + ++ +L ACA + L G++IH RMG+ + ++ L MY+KCG
Sbjct: 295 VKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCG 354
Query: 442 NMTYAEIIFQ--NFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
++ A F N E++L+ +N MI YA +GH +A+ F EM++ GI+PD +TF +
Sbjct: 355 SLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGL 414
Query: 500 LSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE 559
LS H G V++G KYFN M+ Y I+P +HYAC+ DL GRA +L +A + + +P
Sbjct: 415 LSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPA 474
Query: 560 DAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRK 619
I GS L CR +RN E+A A KL LE N YV L+N+YA G W E+ ++R
Sbjct: 475 GPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRA 534
Query: 620 QMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIAGAF 675
++ + GCSW+ + + H+F GD SHP+ IY L E + AG F
Sbjct: 535 IVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALP-EKMKAAGYF 589
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 150/339 (44%), Gaps = 41/339 (12%)
Query: 69 SHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
S D+ + S+F+ + +NSM+ Y G+ + + M S D FT
Sbjct: 118 SGDIDSSVSVFNGIGEPSSLLFNSMIRAYAR-YGFAERTVATYFSMHSWG--FTGDYFTF 174
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE 188
L V+LL+V G+ +H +++ + +SLI +Y KC +A +VF+ T
Sbjct: 175 PFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTI 234
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
++ S NA++A + G ++ AL F R P N VSW T+ISGY Q+G A++ L LF
Sbjct: 235 R-DVSSWNALLAGYTKSGCIDAALAIFERMPWRN-IVSWTTMISGYSQSGLAQQALSLFD 292
Query: 249 RM--GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
M ++GVR N T S L AC L ++ ++IH + GL SN V + +Y K
Sbjct: 293 EMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAK 352
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL--TEKNVVVWTALFS 364
C G++ +AR FD L EKN++ W + +
Sbjct: 353 C-------------------------------GSLVDARNCFDKLNRNEKNLIAWNTMIT 381
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACA 403
Y + E + + G+ D + LL C+
Sbjct: 382 AYASYGHGLQAVSTFREMI-QAGIQPDDITFTGLLSGCS 419
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 120/245 (48%), Gaps = 11/245 (4%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H ++ GL LI +Y K + ++ K+FD M R+V SWN +++ KS +
Sbjct: 194 HGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCI 253
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
A ++F+ P +++V++ +M+ GY + G AL LF EM D +R + T+ S L
Sbjct: 254 DAALAIFERMPWRNIVSWTTMISGY-SQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVL 312
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE-EVN 191
C +L + GRQ+H + +++ + +L MY+KC +A F+ E N
Sbjct: 313 PACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKN 372
Query: 192 LISKNAMVAACCREGEMEMALKTFWR------QPELNDAVSWNTLISGYVQNGDAEEGLK 245
LI+ N M+ A G A+ TF QP D +++ L+SG +G + GLK
Sbjct: 373 LIAWNTMITAYASYGHGLQAVSTFREMIQAGIQP---DDITFTGLLSGCSHSGLVDVGLK 429
Query: 246 LFVRM 250
F M
Sbjct: 430 YFNHM 434
>gi|326528029|dbj|BAJ89066.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 639
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 191/665 (28%), Positives = 304/665 (45%), Gaps = 119/665 (17%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMP--ERNVFSWNTIISACIKSH 70
H Q +K GL L + ++LI Y+ L SR++F P + F NT++ A +
Sbjct: 78 HAQLLKHGLHLDPLAASKLISSYALQRRLPASRRIFASFPNPQATTFLPNTLLRAYALNA 137
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
A SLF + P +D TY S L +++ G
Sbjct: 138 LPHAAVSLFSAMPQRDSFTY-SFLIKALSSSGLTPL------------------------ 172
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
R +H+ +VK + + ++LID YSK + +A +VFE
Sbjct: 173 --------------RAVHSHVVKLGSIEDTYVGNALIDAYSKNGGFLDASKVFE------ 212
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
EM + D VSWN+ ++ V+ G+ ++F M
Sbjct: 213 ------------------EMPRR---------DTVSWNSAMAAMVRQGEVASARRMFDEM 245
Query: 251 GE-NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
+ + V WN ++D Y K
Sbjct: 246 PDKDTVSWNT----------------------------------------VLDGYTKAGK 265
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
M A + RN S S+++ GY +G++E AR FD + KN+V WT + S +
Sbjct: 266 MEDAFELFQCMPERNVVSWSTVVSGYCKKGDIEMARVIFDKMPTKNLVTWTIMVSACAQN 325
Query: 370 QNCEALFDLLSEFVTKEGVVT-DALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK 428
E L ++ KE V D +V +L ACA +L GK IH Y+ +
Sbjct: 326 GLVEEAGRLFTQM--KEAAVELDVAAVVSILAACAESGSLALGKRIHRYVRTRQLGRSTH 383
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFI-ERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
+ + ++DM+ KCG + A+ +F I E+D V +N +I +A HGH +KA+ F +M +
Sbjct: 384 VCNAMIDMFCKCGCVNRADYVFDTEIAEKDSVSWNTIIGGFAMHGHGDKALDFFAQMKLQ 443
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEK 547
G +PDAVT + +LSA H G VE G ++F++M DY I P+ +HY CMIDL GR +E+
Sbjct: 444 GFRPDAVTMINVLSACTHMGFVEEGRQHFSNMERDYGIVPQIEHYGCMIDLLGRGGLIEE 503
Query: 548 AIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAA 607
A+ +KS+P + + VI GS L+ CRL++N E A A +L +L+ +N Y L+N+YA
Sbjct: 504 AVGLIKSMPWDPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAE 563
Query: 608 EGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGE 667
G W++M + R QM+G + AG SW+ ++ H FTVGD H ++ I ++ +
Sbjct: 564 AGQWSDMAKARMQMKGTGSQKSAGSSWIELDEAFHEFTVGDRKHSDSDQISEMVDRLSSH 623
Query: 668 LYEIA 672
+ ++
Sbjct: 624 VKDVG 628
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 125/313 (39%), Gaps = 49/313 (15%)
Query: 271 GLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISS 330
GL+++ +E+H+ +LK+GL +P + S
Sbjct: 67 GLQHLHHVQELHAQLLKHGLHLDPLAA-------------------------------SK 95
Query: 331 MIVGYSLQGNMEEARRHFDSLTEKNVVVW--TALFSGYVKAQNCEALFDLLSEFVTKEGV 388
+I Y+LQ + +RR F S + L Y A L S +
Sbjct: 96 LISSYALQRRLPASRRIFASFPNPQATTFLPNTLLRAYALNALPHAAVSLFSAMPQR--- 152
Query: 389 VTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEI 448
D+ L+ A + + L P + +H++++++G D + + L+D YSK G A
Sbjct: 153 --DSFTYSFLIKALS-SSGLTPLRAVHSHVVKLGSIEDTYVGNALIDAYSKNGGFLDASK 209
Query: 449 IFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGS 508
+F+ RD V +N +A G A +F+EM +K D V++ +L + G
Sbjct: 210 VFEEMPRRDTVSWNSAMAAMVRQGEVASARRMFDEMPDK----DTVSWNTVLDGYTKAGK 265
Query: 509 VEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFL 568
+E + F M +S ++ ++ Y + +E A +PT ++ V +
Sbjct: 266 MEDAFELFQCMPERNVVS-----WSTVVSGYCKKGDIEMARVIFDKMPT-KNLVTWTIMV 319
Query: 569 NVCRLNRNAELAG 581
+ C N E AG
Sbjct: 320 SACAQNGLVEEAG 332
>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
Length = 630
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 170/550 (30%), Positives = 278/550 (50%), Gaps = 65/550 (11%)
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
+D FT+ L LC K ++ G+ H + + LI++Y+KC + A RV
Sbjct: 54 IDVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRV 113
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
F+ M++++ +SWNT+I+GY N + E
Sbjct: 114 FDA------------------------MSVRSI---------ISWNTMIAGYTHNREDVE 140
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
LKLF RM G + E T +S L AC + K++H+ +K L S+ FV + +D
Sbjct: 141 ALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLD 200
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
VY KC NM +++A F+++ EK V W++L
Sbjct: 201 VYAKC-NM------------------------------IKDACWVFENMPEKTSVTWSSL 229
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
F+G+V+ E + L +EG+ + +L CA A + G ++HA I++ G
Sbjct: 230 FAGFVQNGLHEEVLCLFQS-TQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHG 288
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
+ + ++LVD+Y+KCG + + +F + E+++VL+N MIA ++ H H +A++LFE
Sbjct: 289 FHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFE 348
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRA 542
+M + GI P+ VT+++ILSA H G VE G YFN + +D P HY+CM+D+ GR+
Sbjct: 349 KMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRS 408
Query: 543 NQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLA 602
+ ++A + + +P E A + GS L R+++N LA A E+L RLE N +V L+
Sbjct: 409 GKTDEAWKLLDKMPFEPTASMWGSLLGSSRIHKNIRLARIAAEQLFRLEPENGGNHVLLS 468
Query: 603 NVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLA 662
NVYAA GNW + RK +R + G SW+ + +IH+F G+ HP +Y+ L
Sbjct: 469 NVYAASGNWENVVVARKYLRDSGAKKEMGRSWIEAKGKIHVFVAGEREHPGITDVYNKLE 528
Query: 663 IFTGELYEIA 672
E+ +I+
Sbjct: 529 EIYHEMRKIS 538
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 181/402 (45%), Gaps = 101/402 (25%)
Query: 12 CHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHD 71
CH AI GL T+T N LI++Y+K +R++FD M R++
Sbjct: 78 CHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVFDAMSVRSI--------------- 122
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
+++N+M+ GY + + +ALKLF M E +M EFT++ST
Sbjct: 123 ----------------ISWNTMIAGYTHNRE-DVEALKLFSRMHR--EGTQMTEFTLSST 163
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L C + +QLH +K + D+S F ++ +D+Y+KC ++AC VFE E+
Sbjct: 164 LCACAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKT- 222
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
+V+W++L +G+VQNG EE L LF
Sbjct: 223 --------------------------------SVTWSSLFAGFVQNGLHEEVLCLFQSTQ 250
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
G++ E T +S LS C L + ++H+ ++K+G N FV++ +VDVY KC
Sbjct: 251 REGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVATSLVDVYAKC---- 306
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK-AQ 370
G +E++ F + EKNVV+W A+ + + + A
Sbjct: 307 ---------------------------GQIEKSYEVFADMEEKNVVLWNAMIASFSRHAH 339
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
+ EA+ +L E + + G+ + + + +L AC+ + G+
Sbjct: 340 SWEAM--ILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGR 379
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 85/189 (44%), Gaps = 6/189 (3%)
Query: 382 FVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
V E + D L LL CA + +L GK H + G+ D + L+++Y+KCG
Sbjct: 46 LVRVERDLIDVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCG 105
Query: 442 NMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
A +F R ++ +N MIA Y H+ + +A+ LF M +G + T + L
Sbjct: 106 QNDCARRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLC 165
Query: 502 AFRHCGSVEMGEKYFNSMTADYKISPETDHY--ACMIDLYGRANQLEKAIEFMKSIPTEE 559
A C + + T K++ ++ + +D+Y + N ++ A +++P E+
Sbjct: 166 A---CAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMP-EK 221
Query: 560 DAVILGSFL 568
+V S
Sbjct: 222 TSVTWSSLF 230
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 186/658 (28%), Positives = 305/658 (46%), Gaps = 104/658 (15%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L+ + H Q + G + L+++Y+K + +S +F+ M E N SWN +IS
Sbjct: 182 SLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMIS 241
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
C + G +A LF+ M++ M
Sbjct: 242 GC--------------------------------TSNGLHLEAFDLFVRMKNGACTPNM- 268
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
+T+ S KL++V G+++ + + + ++LIDMYSKC +A VF+
Sbjct: 269 -YTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFD 327
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
N I+ WN +ISGY Q+G ++E L
Sbjct: 328 -----TNFINCGV--------------------------NTPWNAMISGYSQSGCSQEAL 356
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL-ISNPFVSSGIVDV 303
+L+V+M +NG+ + +T+ S +A ++++ + +H VLK GL + V++ I D
Sbjct: 357 ELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADA 416
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y KC G +E+ R+ FD + E+++V WT L
Sbjct: 417 YSKC-------------------------------GFLEDVRKVFDRMEERDIVSWTTLV 445
Query: 364 SGYVKAQNCE---ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
+ Y ++ E A F L+ E EG + +L +CA L G+++H + +
Sbjct: 446 TAYSQSSLGEEALATFCLMRE----EGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCK 501
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
G+ +K + S L+DMY+KCG++T A +F D+V + +I+ YA HG E A+ L
Sbjct: 502 AGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQL 561
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
F M GIK +AVT + +L A H G VE G YF M Y + PE +HYAC+IDL G
Sbjct: 562 FRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLG 621
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQ 600
R +L+ A+EF++ +P E + ++ + L CR++ N EL A K+L + A YV
Sbjct: 622 RVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVL 681
Query: 601 LANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
L+N Y G++ + +R M+ + G SW+ V+ +H F GD HP+ IY
Sbjct: 682 LSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIY 739
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Query: 395 LVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL---VDMYSKCGNMTYAEIIFQ 451
L+ +L CA + ++ K +H +L+ + DK L+ +YSKC A +F
Sbjct: 67 LIDVLRDCAEKGSIREAKAVHGLVLKSNFE-DKDLMVLFNHAAHVYSKCSEFRAACGVFD 125
Query: 452 NFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEM 511
+R++ + VMI HG F EML GI PD + AI+ + S+E+
Sbjct: 126 EMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLEL 185
Query: 512 GE 513
G+
Sbjct: 186 GK 187
>gi|255559100|ref|XP_002520572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540232|gb|EEF41805.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 695
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 184/591 (31%), Positives = 293/591 (49%), Gaps = 73/591 (12%)
Query: 76 RSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLC 135
R +FDS K +N+M+ G+I + + + LF++ EH +D+ T S L
Sbjct: 157 RKVFDSCLEKSAEVWNTMIGGHIQNNSF-LEGVYLFLQAMKT-EHTILDDVTFLSALTAV 214
Query: 136 VKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISK 195
+L +G G+Q+HAF +K S +++++ MYS+C + + VFE
Sbjct: 215 SQLQCLGLGQQMHAFTMKNHTVLSVTVLNAILVMYSRCNSVQTSFEVFE----------- 263
Query: 196 NAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGV 255
+ PE D VSWNT+ISG++QNG EEGL L M + G
Sbjct: 264 ---------------------KMPE-KDVVSWNTMISGFIQNGLDEEGLMLVYEMQKQGF 301
Query: 256 RWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAES 315
+ T S LSA LRN + K+ H++++++G I + S ++D+Y K
Sbjct: 302 IADSVTVTSLLSAASNLRNREIGKQTHAYLIRHG-IKFDGMDSYLIDMYAKS-------- 352
Query: 316 MLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS--LTEKNVVVWTALFSGYVKAQNCE 373
G + ++R F++ + ++ W A+ +GY + E
Sbjct: 353 -----------------------GLIRISQRVFENNNIQNRDQATWNAVIAGYTQNGLVE 389
Query: 374 ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL 433
F + + ++ + +A+ L +L AC+ +++ GK++H +R + + + + L
Sbjct: 390 QAF-ITFRLMLEQNLRPNAVTLASILPACSSLGSINLGKQLHGVSIRYSLDQNIFVRTAL 448
Query: 434 VDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDA 493
VDMYSK G + YAE +F ER+ V Y MI Y HG E A+ LF M + GI+PDA
Sbjct: 449 VDMYSKSGAINYAESVFTQSSERNSVTYTTMILGYGQHGMGENALSLFHSMKKSGIQPDA 508
Query: 494 VTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMK 553
+TFVA+LSA + G V+ G + F SM D+KI P T HY C+ D+ GR ++ +A EF+K
Sbjct: 509 ITFVAVLSACSYAGLVDEGLRIFESMKRDFKIQPSTAHYCCVADMLGRVGRVIEAYEFVK 568
Query: 554 SIPTEEDAV-ILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNK-ARY-VQLANVYAAEGN 610
+ E + I GS L CRL+ + EL E +LL + ++ A Y V L+N+YA E N
Sbjct: 569 QLGEEGHVIEIWGSLLGACRLHGHIELGEEVSNRLLEMNSVDRLAGYQVLLSNMYAEEAN 628
Query: 611 WAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
W + ++RK MR + GCSW+ + F D H + IY +L
Sbjct: 629 WETVDKLRKSMREKGLRKEVGCSWIDTGGLLVRFVSKDKDHTRCEEIYEML 679
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 120/467 (25%), Positives = 186/467 (39%), Gaps = 103/467 (22%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K L+ N ++ +YS+ N ++ S ++F++MPE++V SWNT+IS I++
Sbjct: 227 HAFTMKNHTVLSVTVLNAILVMYSRCNSVQTSFEVFEKMPEKDVVSWNTMISGFIQN--- 283
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
G + + L L EMQ + D TVTS L
Sbjct: 284 -----------------------------GLDEEGLMLVYEMQK--QGFIADSVTVTSLL 312
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT-EEVN 191
+ L N G+Q HA++++ G S LIDMY+K + RVFE + +
Sbjct: 313 SAASNLRNREIGKQTHAYLIRHGIKFDGMD-SYLIDMYAKSGLIRISQRVFENNNIQNRD 371
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
+ NA++A GY QNG E+ F M
Sbjct: 372 QATWNAVIA--------------------------------GYTQNGLVEQAFITFRLML 399
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
E +R N T AS L AC L ++ K++H ++ L N FV + +VD+Y K +N
Sbjct: 400 EQNLRPNAVTLASILPACSSLGSINLGKQLHGVSIRYSLDQNIFVRTALVDMYSKSGAIN 459
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
YAES+ RNS + ++MI+GY G E A F S+
Sbjct: 460 YAESVFTQSSERNSVTYTTMILGYGQHGMGENALSLFHSM-------------------- 499
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR-MGVQMDKKLI 430
K G+ DA+ V +L AC+ + G I + R +Q
Sbjct: 500 ------------KKSGIQPDAITFVAVLSACSYAGLVDEGLRIFESMKRDFKIQPSTAHY 547
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLV--LYNVMIACYAHHGHEE 475
+ DM + G + A + E V ++ ++ HGH E
Sbjct: 548 CCVADMLGRVGRVIEAYEFVKQLGEEGHVIEIWGSLLGACRLHGHIE 594
>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Glycine max]
Length = 618
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 176/546 (32%), Positives = 276/546 (50%), Gaps = 76/546 (13%)
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L LC K + GR HA +++ + + LI+MYSKC + A + F
Sbjct: 50 LQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFN------- 102
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
EM +K+ VSWNT+I QN + E LKL ++M
Sbjct: 103 -----------------EMPVKSL---------VSWNTVIGALTQNAEDREALKLLIQMQ 136
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCA----KEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
G +NE T +S L C KCA ++H++ +K + SN FV + ++ VY KC
Sbjct: 137 REGTPFNEFTISSVLCNCA----FKCAILECMQLHAFSIKAAIDSNCFVGTALLHVYAKC 192
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
++ A M F+S+ EKN V W+++ +GYV
Sbjct: 193 SSIKDASQM-------------------------------FESMPEKNAVTWSSMMAGYV 221
Query: 368 K-AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMD 426
+ + EAL L+ G D ++ + ACA A L GK++HA + G +
Sbjct: 222 QNGFHEEAL--LIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSN 279
Query: 427 KKLISTLVDMYSKCGNMTYAEIIFQNFIE-RDLVLYNVMIACYAHHGHEEKAILLFEEML 485
+ S+L+DMY+KCG + A ++FQ +E R +VL+N MI+ +A H +A++LFE+M
Sbjct: 280 IYVSSSLIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQ 339
Query: 486 EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQL 545
++G PD VT+V +L+A H G E G+KYF+ M + +SP HY+CMID+ GRA +
Sbjct: 340 QRGFFPDDVTYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLV 399
Query: 546 EKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVY 605
KA + ++ +P + + GS L C++ N E A A + L +E NN ++ LAN+Y
Sbjct: 400 HKAYDLIERMPFNATSSMWGSLLASCKIYGNIEFAEIAAKYLFEMEPNNAGNHILLANIY 459
Query: 606 AAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFT 665
AA W E+ R RK +R + G SW+ ++++IH FTVG+ +HP+ + IY+ L
Sbjct: 460 AANKKWDEVARARKLLRETDVRKERGTSWIEIKNKIHSFTVGERNHPQIDDIYAKLDNLV 519
Query: 666 GELYEI 671
EL ++
Sbjct: 520 VELKKL 525
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 194/410 (47%), Gaps = 100/410 (24%)
Query: 12 CHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHD 71
CH Q I+ GL + +T+N LI++YSK +L+ +RK F+EMP +++ SWNT+I A +
Sbjct: 65 CHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKSLVSWNTVIGALTQ--- 121
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
NAE E ALKL I+MQ E +EFT++S
Sbjct: 122 ---------------------------NAEDRE--ALKLLIQMQR--EGTPFNEFTISSV 150
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L C + QLHAF +K + D++ F ++L+ +Y+KC ++A ++FE
Sbjct: 151 LCNCAFKCAILECMQLHAFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFES------ 204
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
PE N AV+W+++++GYVQNG EE L +F
Sbjct: 205 --------------------------MPEKN-AVTWSSMMAGYVQNGFHEEALLIFRNAQ 237
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
G + +SA+SAC GL + K++H+ K+G SN +VSS ++D+Y KC +
Sbjct: 238 LMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIR 297
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK-AQ 370
E+ L+ +GV L +++V+W A+ SG+ + A+
Sbjct: 298 --EAYLVFQGV----------------------------LEVRSIVLWNAMISGFARHAR 327
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
EA+ +L E + + G D + V +L AC+ G++ ++R
Sbjct: 328 APEAM--ILFEKMQQRGFFPDDVTYVCVLNACSHMGLHEEGQKYFDLMVR 375
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 16/203 (7%)
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD 457
LL CA + G+ HA I+R+G++MD + L++MYSKC + A F +
Sbjct: 49 LLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKS 108
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAIL--SAFRHCGSVEMGEKY 515
LV +N +I + + +A+ L +M +G + T ++L AF+ C +E + +
Sbjct: 109 LVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFK-CAILECMQLH 167
Query: 516 FNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFL------- 568
S+ A I ++ +Y + + ++ A + +S+P E++AV S +
Sbjct: 168 AFSIKA--AIDSNCFVGTALLHVYAKCSSIKDASQMFESMP-EKNAVTWSSMMAGYVQNG 224
Query: 569 ---NVCRLNRNAELAGEAEEKLL 588
+ RNA+L G ++ +
Sbjct: 225 FHEEALLIFRNAQLMGFDQDPFM 247
>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
Length = 854
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 201/666 (30%), Positives = 312/666 (46%), Gaps = 106/666 (15%)
Query: 13 HVQAIKAGL--TLTTITTNQLIHIYSKHNLLRESRKLF-DEMPER-NVFSWNTIISACIK 68
H A+K GL N L+ +Y++ L+ ++++LF P R +V +WNT++S ++
Sbjct: 189 HAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQ 248
Query: 69 SHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
S +FD +A++ +M + +R D T
Sbjct: 249 S-------GMFD-------------------------EAVQTLYDMVALG--VRPDGVTF 274
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSN-DASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
S L C +L + GR++HA+++K A+ F S+L+DMY+ +A +VF+
Sbjct: 275 ASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFD--- 331
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
MV ++ M WN +I GY Q G EE L+LF
Sbjct: 332 ----------MVPDSGKQLGM------------------WNAMICGYAQAGMDEEALRLF 363
Query: 248 VRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
RM E G E T AS L AC + +H +V+K G+ N FV + ++D+Y +
Sbjct: 364 ARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYAR 423
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
G + ARR F + +VV W L +G
Sbjct: 424 L-------------------------------GKTDVARRIFAMVDLPDVVSWNTLITGC 452
Query: 367 VKAQNCEALFDLLSEFVTKE--GVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
V + F L E E GVV +A+ L+ LL CA+ AA GKEIH Y +R +
Sbjct: 453 VVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALD 512
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
D + S LVDMY+KCG + + +F R+ + +NV+I Y HG +A +LF+ M
Sbjct: 513 TDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRM 572
Query: 485 LEKG-IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRAN 543
G +P+ VTF+A L+A H G V+ G + F++M D+ + P D AC++D+ GRA
Sbjct: 573 TASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAG 632
Query: 544 QLEKAIEFMKSIPTEEDAV-ILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLA 602
+L++A + S+ T E V + L CRL+RN L A E+LL LE + YV L
Sbjct: 633 RLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLC 692
Query: 603 NVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLA 662
N+Y+A G W +R +MR + GCSW+ V+ IH F G+ +HP + +++ +
Sbjct: 693 NIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHME 752
Query: 663 IFTGEL 668
GE+
Sbjct: 753 ALWGEM 758
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 138/322 (42%), Gaps = 49/322 (15%)
Query: 196 NAMVAACCREGEMEMALKTFWR-QPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
NA++ A R G + AL+ F +DAVS+N+LIS + L M G
Sbjct: 98 NALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGG 157
Query: 255 VRWNEHTFASALSACCGLRN----VKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
T S L A L V+ +E H++ LKNGL+
Sbjct: 158 HPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHG----------------- 200
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT--EKNVVVWTALFSGYVK 368
F+ ++++ Y+ G + +A+R F T +VV W + S V+
Sbjct: 201 ------------HQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQ 248
Query: 369 A----QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG-V 423
+ + + L+D+++ GV D + L AC+ L G+E+HAY+++ +
Sbjct: 249 SGMFDEAVQTLYDMVA-----LGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDEL 303
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIE--RDLVLYNVMIACYAHHGHEEKAILLF 481
+ + S LVDMY+ + A +F + + L ++N MI YA G +E+A+ LF
Sbjct: 304 AANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLF 363
Query: 482 EEM-LEKGIKPDAVTFVAILSA 502
M E G P T ++L A
Sbjct: 364 ARMEAEAGFVPCETTMASVLPA 385
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 166/399 (41%), Gaps = 49/399 (12%)
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI--SNPFVSSGIVDVYC 305
+ M + + A+ + LR+ + A+ IH+ L+ GL+ +P V++ ++ Y
Sbjct: 46 ITMASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYA 105
Query: 306 KCENMNYAESML--LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
+C + A + + ++ S +S+I L F + L
Sbjct: 106 RCGRLAAALEVFGSISDSAHDAVSFNSLISALCL----------FRRWDHALAALRAMLA 155
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
G+ L+ F + L V L A A AA+ G+E HA+ L+ G+
Sbjct: 156 GGHP-----------LTSFT-----LVSVLRAVSHLPAAA--AAVRLGREAHAFALKNGL 197
Query: 424 QMDKKLIS--TLVDMYSKCGNMTYAEIIFQNFI--ERDLVLYNVMIACYAHHGHEEKAIL 479
+ + L+ MY++ G + A+ +F D+V +N M++ G ++A+
Sbjct: 198 LHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQ 257
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
+M+ G++PD VTF + L A +++G + + D +++ + + ++D+Y
Sbjct: 258 TLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMY 317
Query: 540 GRANQLEKAIEFMKSIPTEE------DAVILG---SFLNVCRLNRNAELAGEAEEKLLRL 590
Q+ KA + +P +A+I G + ++ L A + EAE +
Sbjct: 318 ATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARM--EAEAGFVPC 375
Query: 591 EGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRF 629
E + A A G A G + K RGM GNRF
Sbjct: 376 ETTMASVLPACARSEAFAGKEAVHGYVVK--RGMAGNRF 412
>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
Length = 870
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 195/681 (28%), Positives = 316/681 (46%), Gaps = 106/681 (15%)
Query: 50 EMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALK 109
E P + N ++S ++ ++ A +F P +D+ ++N M+ GY G+ +AL
Sbjct: 125 EHPSFGLRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGY-GKVGFLEEALD 183
Query: 110 LFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDM 169
L+ M A +R D +T L C + + GR++HA +++ +++L+ M
Sbjct: 184 LYYRMLWAG--MRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTM 241
Query: 170 YSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNT 229
Y+KC A +VF+G MA+ D +SWN
Sbjct: 242 YAKCGDIVAARKVFDG------------------------MAV---------TDCISWNA 268
Query: 230 LISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG 289
+I+G+ +N + E GL+LF+ M EN V+ N T S A L V AKE+H + +K G
Sbjct: 269 MIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRG 328
Query: 290 LISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFD 349
+ + ++ +Y M A + +++ S ++MI GY G ++A +
Sbjct: 329 FAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYA 388
Query: 350 SLTEKN---------------------------------------VVVWTALFSGYVKAQ 370
+ N VVV AL Y K++
Sbjct: 389 LMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSK 448
Query: 371 NCEALFDLLSEFVTKEGVVT------------------------------DALILVILLG 400
+ + ++ +F+ ++ VV+ +++ + L
Sbjct: 449 HIDKAIEVF-KFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLGHVKPNSVTFIAALS 507
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL 460
ACA AL GKEIHAY+LR G+ + + + L+D+Y KCG +YA F E+D+V
Sbjct: 508 ACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVS 567
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
+N+M++ + HG + A+ LF +M+E G PD VTFVA+L A G V G + F+ MT
Sbjct: 568 WNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMT 627
Query: 521 ADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELA 580
+ I P HYACM+DL R +L +A + +P + DA + G+ LN CR++R+ EL
Sbjct: 628 EKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELG 687
Query: 581 GEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHE 640
A + +L LE N+ A +V L ++Y G WA++ R+RK MR + GCSWV V+
Sbjct: 688 ELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGV 747
Query: 641 IHIFTVGDVSHPKTNAIYSVL 661
H F D SHP+ I VL
Sbjct: 748 THAFLTDDESHPQIKEINVVL 768
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 101/235 (42%), Gaps = 32/235 (13%)
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL 460
ACA A HP ++ LR+G + ++ M + G + +A +F ERD+
Sbjct: 118 ACARADAEHP-----SFGLRLG--------NAMLSMLVRFGEIWHAWRVFAKMPERDVFS 164
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVE---MGEKYFN 517
+NVM+ Y G E+A+ L+ ML G++PD TF +L R CG + MG + +
Sbjct: 165 WNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVL---RTCGGIPDWRMGRE-VH 220
Query: 518 SMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE----DAVILGSFLNVCRL 573
+ + E D ++ +Y + + A + + + +A+I G F
Sbjct: 221 AHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHF------ 274
Query: 574 NRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNR 628
N E E L LE + + + +V A G +E+G K+M G R
Sbjct: 275 -ENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVG-FAKEMHGFAVKR 327
>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 793
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 183/615 (29%), Positives = 298/615 (48%), Gaps = 75/615 (12%)
Query: 54 RNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIE 113
+ VF N +I K + AR LF+SS D V++NS++ GY YE + LKL ++
Sbjct: 143 QQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYARVGAYE-EMLKLLVK 201
Query: 114 MQSADEHIRMDEFTVTSTLNLCVKLLN--VGFGRQLHAFMVKTSNDASGFAVSSLIDMYS 171
M +R++ FT+ S L C LN V +G+ LH + VK D ++L+DMY+
Sbjct: 202 MHHTG--LRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYA 259
Query: 172 KCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLI 231
K G + A++ F P N V +N +I
Sbjct: 260 KT--------------------------------GYLGDAIQLFRTSPNQN-VVMYNAMI 286
Query: 232 SGYVQNGD-----AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVL 286
+G++Q D A E LKLF +M G++ ++ TF+S + C + + K+IH+ +
Sbjct: 287 AGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHIC 346
Query: 287 KNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARR 346
K+ + S+ F+ S ++++Y SL G+ E+ +
Sbjct: 347 KHNIQSDEFIGSTLIELY-------------------------------SLLGSTEDQLK 375
Query: 347 HFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQA 406
F+S + ++V WT + +GY + E+ L E + G D I+ +L ACA A
Sbjct: 376 CFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLA-SGKKPDEFIITTMLSACADVA 434
Query: 407 ALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIA 466
A G+++H Y ++ G+ + ++ + MY+K GN+ A+I F+ D+V ++VMI
Sbjct: 435 AERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMIC 494
Query: 467 CYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKIS 526
A HGH + AI LFE M GI P+ +TF+ +L+A H G VE G +Y+ SM DY +
Sbjct: 495 SNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYESMKKDYDMK 554
Query: 527 PETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEK 586
H C++DL RA +L A F+ + + V+ + L+ CR+ ++ EK
Sbjct: 555 INVKHCTCIVDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLLSGCRIYKDIVTGKHVAEK 614
Query: 587 LLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTV 646
L+ L+ + YV L N+Y G +IR+ M+ + G SW+ V +E+H F V
Sbjct: 615 LIELDPQESSSYVLLYNIYTDAGIDLPATKIRELMKDRGIRKEPGQSWIEVGNEVHSFVV 674
Query: 647 GDVSHPKTNAIYSVL 661
GD+SHP + IY L
Sbjct: 675 GDISHPMSQIIYKKL 689
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 131/510 (25%), Positives = 220/510 (43%), Gaps = 104/510 (20%)
Query: 11 ICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSH 70
+ H IK N +++YSK + ++KLFD M ER+V S+N +IS
Sbjct: 30 LAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLFDRMSERSVISYNILISG----- 84
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
Y M G+ A+ LF E + A +++D+F+
Sbjct: 85 -------------------YGGM--------GFYHKAIGLFSEARMA--CLKLDKFSYAG 115
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L+ C ++ + G+ +H + F + LIDMY KC + A +FE ++E+
Sbjct: 116 VLSACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFES-SDEL 174
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
+ +S N +LI+GY + G EE LKL V+M
Sbjct: 175 DNVSWN--------------------------------SLITGYARVGAYEEMLKLLVKM 202
Query: 251 GENGVRWNEHTFASALSAC-CGLRN-VKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
G+R N T SAL +C L N V K +H + +K GL + V + ++D+Y K
Sbjct: 203 HHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAK-- 260
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
G + +A + F + +NVV++ A+ +G+++
Sbjct: 261 -----------------------------TGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQ 291
Query: 369 AQNC--EALFDLLSEF--VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
++ E ++ L F + ++G+ ++ C A GK+IHA+I + +Q
Sbjct: 292 TEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQ 351
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
D+ + STL+++YS G+ F + + D+V + MIA YA +G E A+ LF E+
Sbjct: 352 SDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYEL 411
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
L G KPD +LSA + GE+
Sbjct: 412 LASGKKPDEFIITTMLSACADVAAERSGEQ 441
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 84/202 (41%), Gaps = 39/202 (19%)
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
GK HA++++ L++ +++YSK G M A+ +F ER ++ YN++I+ Y
Sbjct: 28 GKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLFDRMSERSVISYNILISGYGG 87
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVE----------------MGEK 514
G KAI LF E +K D ++ +LSA CG ++ +G++
Sbjct: 88 MGFYHKAIGLFSEARMACLKLDKFSYAGVLSA---CGQIKDFALGKVIHGLAIVCGLGQQ 144
Query: 515 YF--NSMTADYKISPETDH---------------YACMIDLYGRANQLEKAIEF---MKS 554
F N + Y DH + +I Y R E+ ++ M
Sbjct: 145 VFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYARVGAYEEMLKLLVKMHH 204
Query: 555 IPTEEDAVILGSFLNVCRLNRN 576
+A LGS L C LN N
Sbjct: 205 TGLRLNAFTLGSALKSCYLNLN 226
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 77/180 (42%), Gaps = 32/180 (17%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A+K G+ I N I +Y+K L ++ F+E+ +V SW+ +I + +
Sbjct: 443 HGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHA 502
Query: 73 KQARSLFD----SSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
K A +LF+ H + +T+ +L + G + L+ + M+ D ++++
Sbjct: 503 KDAINLFELMKSYGIHPNQITFLGVLTACSHG-GLVEEGLRYYESMKK-DYDMKINVKHC 560
Query: 129 TSTLNLCVK----------LLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEE 178
T ++L + +LN GFG H M +T + S CR Y++
Sbjct: 561 TCIVDLLSRAGRLLDAKNFILNSGFGD--HPVMWRT--------------LLSGCRIYKD 604
>gi|356530245|ref|XP_003533693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Glycine max]
Length = 581
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 167/525 (31%), Positives = 278/525 (52%), Gaps = 30/525 (5%)
Query: 164 SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELND 223
+++I Y KC EA ++F+ + N+++ AMV + +++ A + F+ P L +
Sbjct: 36 TTMITGYLKCGMIREARKLFDRWDAKKNVVTWTAMVNGYIKFNQVKEAERLFYEMP-LRN 94
Query: 224 AVSWNTLISGYVQNGDAEEGLKLFVRMGE-NGVRWNEHTFASALSACCGLRNVK------ 276
VSWNT++ GY +NG ++ L LF RM E N V WN T +AL C + + +
Sbjct: 95 VVSWNTMVDGYARNGLTQQALDLFRRMPERNVVSWN--TIITALVQCGRIEDAQRLFDQM 152
Query: 277 CAKEIHSW------VLKNGLIS------------NPFVSSGIVDVYCKCENMNYAESMLL 318
+++ SW + KNG + N + ++ Y + ++ A +
Sbjct: 153 KDRDVVSWTTMVAGLAKNGRVEDARALFDQMPVRNVVSWNAMITGYAQNRRLDEALQLFQ 212
Query: 319 LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDL 378
R+ S ++MI G+ G + A + F + EKNV+ WTA+ +GYV+ E +
Sbjct: 213 RMPERDMPSWNTMITGFIQNGELNRAEKLFGEMQEKNVITWTAMMTGYVQHGLSEEALRV 272
Query: 379 LSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYS 438
+ + + + V +LGAC+ A L G++IH I + Q ++S L++MYS
Sbjct: 273 FIKMLATNELKPNTGTFVTVLGACSDLAGLTEGQQIHQMISKTVFQDSTCVVSALINMYS 332
Query: 439 KCGNMTYAEIIFQNFI--ERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTF 496
KCG + A +F + + +RDL+ +N MIA YAHHG+ ++AI LF EM E G+ + VTF
Sbjct: 333 KCGELHTARKMFDDGLLSQRDLISWNGMIAAYAHHGYGKEAINLFNEMQELGVCANDVTF 392
Query: 497 VAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIP 556
V +L+A H G VE G KYF+ + + I DHYAC++DL GRA +L++A ++ +
Sbjct: 393 VGLLTACSHTGLVEEGFKYFDEILKNRSIQLREDHYACLVDLCGRAGRLKEASNIIEGLG 452
Query: 557 TEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGR 616
E + G+ L C ++ NA++ EK+L++E N Y L+N+YA+ G W E
Sbjct: 453 EEVPLTVWGALLAGCNVHGNADIGKLVAEKILKIEPQNAGTYSLLSNMYASVGKWKEAAN 512
Query: 617 IRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+R +M+ M + GCSW+ V + + +F VGD H + + +L
Sbjct: 513 VRMRMKDMGLKKQPGCSWIEVGNTVQVFVVGDKPHSQYEPLGHLL 557
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/483 (25%), Positives = 227/483 (46%), Gaps = 56/483 (11%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
+T +++ Y K N ++E+ +LF EMP RNV SWNT++ ++ +QA LF P +
Sbjct: 65 VTWTAMVNGYIKFNQVKEAERLFYEMPLRNVVSWNTMVDGYARNGLTQQALDLFRRMPER 124
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR 145
++V++N+++ + G DA +LF +M+ D V S + L G
Sbjct: 125 NVVSWNTIITALVQC-GRIEDAQRLFDQMKDRD---------VVSWTTMVAGLAKNGRVE 174
Query: 146 QLHAFM--VKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
A + N S +++I Y++ R +EA ++F+ E ++ S N M+
Sbjct: 175 DARALFDQMPVRNVVSW---NAMITGYAQNRRLDEALQLFQRMPER-DMPSWNTMITGFI 230
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM-GENGVRWNEHTF 262
+ GE+ A K F E N ++W +++GYVQ+G +EE L++F++M N ++ N TF
Sbjct: 231 QNGELNRAEKLFGEMQEKN-VITWTAMMTGYVQHGLSEEALRVFIKMLATNELKPNTGTF 289
Query: 263 ASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGV 322
+ L AC L + ++IH + K + V S ++++Y KC
Sbjct: 290 VTVLGACSDLAGLTEGQQIHQMISKTVFQDSTCVVSALINMYSKC--------------- 334
Query: 323 RNSFSISSMIVGYSLQGNMEEARRHFDS--LTEKNVVVWTALFSGYVKAQNCEALFDLLS 380
G + AR+ FD L++++++ W + + Y + +L +
Sbjct: 335 ----------------GELHTARKMFDDGLLSQRDLISWNGMIAAYAHHGYGKEAINLFN 378
Query: 381 EFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR-MGVQMDKKLISTLVDMYSK 439
E + + GV + + V LL AC+ + G + IL+ +Q+ + + LVD+ +
Sbjct: 379 E-MQELGVCANDVTFVGLLTACSHTGLVEEGFKYFDEILKNRSIQLREDHYACLVDLCGR 437
Query: 440 CGNMTYAEIIFQNFIER-DLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVA 498
G + A I + E L ++ ++A HG+ + L+ E++L+ I+P +
Sbjct: 438 AGRLKEASNIIEGLGEEVPLTVWGALLAGCNVHGNADIGKLVAEKILK--IEPQNAGTYS 495
Query: 499 ILS 501
+LS
Sbjct: 496 LLS 498
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 161/355 (45%), Gaps = 21/355 (5%)
Query: 196 NAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGV 255
N ++ CREGE++ A K F PE D W T+I+GY++ G E KLF R
Sbjct: 5 NLFISRLCREGEIDYARKVFEEMPE-RDIGLWTTMITGYLKCGMIREARKLFDRW---DA 60
Query: 256 RWNEHTFASALSACCGLRNVKCAKEI-HSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
+ N T+ + ++ VK A+ + + L+N + N +VD Y + A
Sbjct: 61 KKNVVTWTAMVNGYIKFNQVKEAERLFYEMPLRNVVSWNT-----MVDGYARNGLTQQAL 115
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEA 374
+ RN S +++I G +E+A+R FD + +++VV WT + +G K E
Sbjct: 116 DLFRRMPERNVVSWNTIITALVQCGRIEDAQRLFDQMKDRDVVSWTTMVAGLAKNGRVED 175
Query: 375 LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLV 434
L + + V +A+I A L ++ RM + D +T++
Sbjct: 176 ARALFDQMPVRNVVSWNAMIT-----GYAQNRRLDEALQLFQ---RM-PERDMPSWNTMI 226
Query: 435 DMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG-IKPDA 493
+ + G + AE +F E++++ + M+ Y HG E+A+ +F +ML +KP+
Sbjct: 227 TGFIQNGELNRAEKLFGEMQEKNVITWTAMMTGYVQHGLSEEALRVFIKMLATNELKPNT 286
Query: 494 VTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
TFV +L A + G++ + M + T + +I++Y + +L A
Sbjct: 287 GTFVTVLGACSDLAGLTEGQQ-IHQMISKTVFQDSTCVVSALINMYSKCGELHTA 340
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 117/253 (46%), Gaps = 22/253 (8%)
Query: 338 QGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVI 397
+G ++ AR+ F+ + E+++ +WT + +GY+K L + K+ VVT +
Sbjct: 14 EGEIDYARKVFEEMPERDIGLWTTMITGYLKCGMIREARKLFDRWDAKKNVVT---WTAM 70
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD 457
+ G + + LR V + T+VD Y++ G A +F+ ER+
Sbjct: 71 VNGYIKFNQVKEAERLFYEMPLRNVVSWN-----TMVDGYARNGLTQQALDLFRRMPERN 125
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFN 517
+V +N +I G E A LF++M ++ D V++ +++ G VE F+
Sbjct: 126 VVSWNTIITALVQCGRIEDAQRLFDQMKDR----DVVSWTTMVAGLAKNGRVEDARALFD 181
Query: 518 SMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE----DAVILGSFLNVCRL 573
M +S + MI Y + +L++A++ + +P + + +I G F+ L
Sbjct: 182 QMPVRNVVS-----WNAMITGYAQNRRLDEALQLFQRMPERDMPSWNTMITG-FIQNGEL 235
Query: 574 NRNAELAGEAEEK 586
NR +L GE +EK
Sbjct: 236 NRAEKLFGEMQEK 248
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 107/259 (41%), Gaps = 45/259 (17%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDE--MPERNVFSWNTII 63
L E H K +T + LI++YSK L +RK+FD+ + +R++ SWN +I
Sbjct: 302 LTEGQQIHQMISKTVFQDSTCVVSALINMYSKCGELHTARKMFDDGLLSQRDLISWNGMI 361
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
+A +H GY +A+ LF EMQ +
Sbjct: 362 AAY--AH------------------------------HGYGKEAINLFNEMQELG--VCA 387
Query: 124 DEFTVTSTLNLC--VKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
++ T L C L+ GF + + S + L+D+ + +EA
Sbjct: 388 NDVTFVGLLTACSHTGLVEEGF-KYFDEILKNRSIQLREDHYACLVDLCGRAGRLKEASN 446
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEM----ALKTFWRQPELNDAVSWNTLISGYVQN 237
+ EG EEV L A++A C G ++ A K +P+ +A +++ L + Y
Sbjct: 447 IIEGLGEEVPLTVWGALLAGCNVHGNADIGKLVAEKILKIEPQ--NAGTYSLLSNMYASV 504
Query: 238 GDAEEGLKLFVRMGENGVR 256
G +E + +RM + G++
Sbjct: 505 GKWKEAANVRMRMKDMGLK 523
>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
Length = 856
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 201/666 (30%), Positives = 312/666 (46%), Gaps = 106/666 (15%)
Query: 13 HVQAIKAGL--TLTTITTNQLIHIYSKHNLLRESRKLF-DEMPER-NVFSWNTIISACIK 68
H A+K GL N L+ +Y++ L+ ++++LF P R +V +WNT++S ++
Sbjct: 191 HAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQ 250
Query: 69 SHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
S +FD +A++ +M + +R D T
Sbjct: 251 S-------GMFD-------------------------EAVQTLYDMVALG--VRPDGVTF 276
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSN-DASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
S L C +L + GR++HA+++K A+ F S+L+DMY+ +A +VF+
Sbjct: 277 ASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFD--- 333
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
MV ++ M WN +I GY Q G EE L+LF
Sbjct: 334 ----------MVPDSGKQLGM------------------WNAMICGYAQAGMDEEALRLF 365
Query: 248 VRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
RM E G E T AS L AC + +H +V+K G+ N FV + ++D+Y +
Sbjct: 366 ARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYAR 425
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
G + ARR F + +VV W L +G
Sbjct: 426 L-------------------------------GKTDVARRIFAMVDLPDVVSWNTLITGC 454
Query: 367 VKAQNCEALFDLLSEFVTKE--GVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
V + F L E E GVV +A+ L+ LL CA+ AA GKEIH Y +R +
Sbjct: 455 VVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALD 514
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
D + S LVDMY+KCG + + +F R+ + +NV+I Y HG +A +LF+ M
Sbjct: 515 TDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRM 574
Query: 485 LEKG-IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRAN 543
G +P+ VTF+A L+A H G V+ G + F++M D+ + P D AC++D+ GRA
Sbjct: 575 TASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAG 634
Query: 544 QLEKAIEFMKSIPTEEDAV-ILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLA 602
+L++A + S+ T E V + L CRL+RN L A E+LL LE + YV L
Sbjct: 635 RLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLC 694
Query: 603 NVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLA 662
N+Y+A G W +R +MR + GCSW+ V+ IH F G+ +HP + +++ +
Sbjct: 695 NIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHME 754
Query: 663 IFTGEL 668
GE+
Sbjct: 755 ALWGEM 760
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 138/322 (42%), Gaps = 49/322 (15%)
Query: 196 NAMVAACCREGEMEMALKTFWR-QPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
NA++ A R G + AL+ F +DAVS+N+LIS + L M G
Sbjct: 100 NALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGG 159
Query: 255 VRWNEHTFASALSACCGLRN----VKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
T S L A L V+ +E H++ LKNGL+
Sbjct: 160 HPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHG----------------- 202
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT--EKNVVVWTALFSGYVK 368
F+ ++++ Y+ G + +A+R F T +VV W + S V+
Sbjct: 203 ------------HQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQ 250
Query: 369 A----QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG-V 423
+ + + L+D+++ GV D + L AC+ L G+E+HAY+++ +
Sbjct: 251 SGMFDEAVQTLYDMVA-----LGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDEL 305
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIE--RDLVLYNVMIACYAHHGHEEKAILLF 481
+ + S LVDMY+ + A +F + + L ++N MI YA G +E+A+ LF
Sbjct: 306 AANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLF 365
Query: 482 EEM-LEKGIKPDAVTFVAILSA 502
M E G P T ++L A
Sbjct: 366 ARMEAEAGFVPCETTMASVLPA 387
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 166/399 (41%), Gaps = 49/399 (12%)
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI--SNPFVSSGIVDVYC 305
+ M + + A+ + LR+ + A+ IH+ L+ GL+ +P V++ ++ Y
Sbjct: 48 ITMASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYA 107
Query: 306 KCENMNYAESML--LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
+C + A + + ++ S +S+I L F + L
Sbjct: 108 RCGRLAAALEVFGSISDSAHDAVSFNSLISALCL----------FRRWDHALAALRAMLA 157
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
G+ L+ F + L V L A A AA+ G+E HA+ L+ G+
Sbjct: 158 GGHP-----------LTSFT-----LVSVLRAVSHLPAAA--AAVRLGREAHAFALKNGL 199
Query: 424 QMDKKLIS--TLVDMYSKCGNMTYAEIIFQNFI--ERDLVLYNVMIACYAHHGHEEKAIL 479
+ + L+ MY++ G + A+ +F D+V +N M++ G ++A+
Sbjct: 200 LHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQ 259
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
+M+ G++PD VTF + L A +++G + + D +++ + + ++D+Y
Sbjct: 260 TLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMY 319
Query: 540 GRANQLEKAIEFMKSIPTEE------DAVILG---SFLNVCRLNRNAELAGEAEEKLLRL 590
Q+ KA + +P +A+I G + ++ L A + EAE +
Sbjct: 320 ATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARM--EAEAGFVPC 377
Query: 591 EGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRF 629
E + A A G A G + K RGM GNRF
Sbjct: 378 ETTMASVLPACARSEAFAGKEAVHGYVVK--RGMAGNRF 414
>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial; Flags: Precursor
gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1028
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 214/746 (28%), Positives = 326/746 (43%), Gaps = 158/746 (21%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII- 63
NL L+ H +AIK GL + L+ +YSK + + K+F+ + E+N WN +I
Sbjct: 342 NLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIR 401
Query: 64 ----------------------------------SACIKSHDLK---------------- 73
S C SHDL+
Sbjct: 402 GYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAK 461
Query: 74 -------------------QARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
AR +F+ +D VT+N+++ Y+ E E++A LF M
Sbjct: 462 NLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDEN-ESEAFDLFKRM 520
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
I D + STL C + + G+Q+H VK D SSLIDMYSKC
Sbjct: 521 NLCG--IVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCG 578
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
++A +VF E W VS N LI+GY
Sbjct: 579 IIKDARKVFSSLPE---------------------------W------SVVSMNALIAGY 605
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
QN + EE + LF M GV +E TFA+ + AC ++ + H + K G
Sbjct: 606 SQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRG----- 659
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQG------NMEEARRHF 348
FS +G SL G M EA F
Sbjct: 660 -------------------------------FSSEGEYLGISLLGMYMNSRGMTEACALF 688
Query: 349 DSLT-EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAA 407
L+ K++V+WT + SG+ + E E + +GV+ D V +L C++ ++
Sbjct: 689 SELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKE-MRHDGVLPDQATFVTVLRVCSVLSS 747
Query: 408 LHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER-DLVLYNVMIA 466
L G+ IH+ I + +D+ +TL+DMY+KCG+M + +F R ++V +N +I
Sbjct: 748 LREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLIN 807
Query: 467 CYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKIS 526
YA +G+ E A+ +F+ M + I PD +TF+ +L+A H G V G K F M Y I
Sbjct: 808 GYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIE 867
Query: 527 PETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGE-AEE 585
DH ACM+DL GR L++A +F+++ + DA + S L CR++ + ++ GE + E
Sbjct: 868 ARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGD-DIRGEISAE 926
Query: 586 KLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFT 645
KL+ LE N + YV L+N+YA++G W + +RK MR + G SW+ VE HIF
Sbjct: 927 KLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFA 986
Query: 646 VGDVSHPKTNAIYSVLAIFTGELYEI 671
GD SH + I +F +LY++
Sbjct: 987 AGDKSHSEIGKI----EMFLEDLYDL 1008
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 149/572 (26%), Positives = 242/572 (42%), Gaps = 94/572 (16%)
Query: 41 LRESRKLFDEMPERNVFSW----------------------NTIISACIKSHDLKQARSL 78
L +SRK+FDEMP+R + N I+ K + A
Sbjct: 58 LFKSRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQ 117
Query: 79 FDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKL 138
FD KD+ +NSML Y ++ G L+ F+ + + I ++FT + L+ C +
Sbjct: 118 FDF-LEKDVTAWNSMLSMY-SSIGKPGKVLRSFVSL--FENQIFPNKFTFSIVLSTCARE 173
Query: 139 LNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAM 198
NV FGRQ+H M+K + + + +L+DMY+KC +A RVFE + N + +
Sbjct: 174 TNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDP-NTVCWTCL 232
Query: 199 VAACCREGEMEMA----------------------LKTFWRQPELNDA------------ 224
+ + G E A + T+ R +L DA
Sbjct: 233 FSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDV 292
Query: 225 VSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSW 284
V+WN +ISG+ + G ++ F M ++ V+ T S LSA + N+ +H+
Sbjct: 293 VAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAE 352
Query: 285 VLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEA 344
+K GL SN +V S +V +Y KCE ME A
Sbjct: 353 AIKLGLASNIYVGSSLVSMYSKCE-------------------------------KMEAA 381
Query: 345 RRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACAL 404
+ F++L EKN V W A+ GY + +L + + G D LL CA
Sbjct: 382 AKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMD-MKSSGYNIDDFTFTSLLSTCAA 440
Query: 405 QAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVM 464
L G + H+ I++ + + + + LVDMY+KCG + A IF+ +RD V +N +
Sbjct: 441 SHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTI 500
Query: 465 IACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYK 524
I Y +E +A LF+ M GI D + L A H + G K + ++
Sbjct: 501 IGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQG-KQVHCLSVKCG 559
Query: 525 ISPETDHYACMIDLYGRANQLEKAIEFMKSIP 556
+ + + +ID+Y + ++ A + S+P
Sbjct: 560 LDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 183/385 (47%), Gaps = 40/385 (10%)
Query: 223 DAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIH 282
D +WN+++S Y G + L+ FV + EN + N+ TF+ LS C NV+ ++IH
Sbjct: 124 DVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIH 183
Query: 283 SWVLKNGLISNPFVSSGIVDVYCKCENMNYA----------------------------- 313
++K GL N + +VD+Y KC+ ++ A
Sbjct: 184 CSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPE 243
Query: 314 ESMLLLKGVRNS------FSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
E++L+ + +R+ + ++I Y G +++AR F ++ +VV W + SG+
Sbjct: 244 EAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHG 303
Query: 368 KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDK 427
K + CE + + K V + L +L A + A L G +HA +++G+ +
Sbjct: 304 K-RGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNI 362
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
+ S+LV MYSKC M A +F+ E++ V +N MI YAH+G K + LF +M
Sbjct: 363 YVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSS 422
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEK 547
G D TF ++LS +EMG + F+S+ K++ ++D+Y + LE
Sbjct: 423 GYNIDDFTFTSLLSTCAASHDLEMGSQ-FHSIIIKKKLAKNLFVGNALVDMYAKCGALED 481
Query: 548 AIEFMKSIPTEEDA---VILGSFLN 569
A + + + ++ I+GS++
Sbjct: 482 ARQIFERMCDRDNVTWNTIIGSYVQ 506
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 142/310 (45%), Gaps = 43/310 (13%)
Query: 275 VKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVG 334
++ K +HS L G+ S + + IVD+Y KC ++YAE
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAE-------------------- 115
Query: 335 YSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK-AQNCEALFDLLSEFVTKEGVVTDAL 393
+ FD L EK+V W ++ S Y + + L +S F + + +
Sbjct: 116 -----------KQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQ--IFPNKF 161
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF 453
I+L CA + + G++IH +++MG++ + LVDMY+KC ++ A +F+
Sbjct: 162 TFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWI 221
Query: 454 IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
++ + V + + + Y G E+A+L+FE M ++G +PD + FV +++ + G ++
Sbjct: 222 VDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDAR 281
Query: 514 KYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF---MKSIPTEEDAVILGSFLNV 570
F M+ SP+ + MI +G+ AIE+ M+ + LGS L+
Sbjct: 282 LLFGEMS-----SPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
Query: 571 CRLNRNAELA 580
+ N +L
Sbjct: 337 IGIVANLDLG 346
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 173/644 (26%), Positives = 311/644 (48%), Gaps = 77/644 (11%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLV 88
NQL HI+++ LLR +++ + N I+ + ++ +F ++
Sbjct: 30 NQLKHIHAR--LLRLHL-------DQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIF 80
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLH 148
+N+M+ G ++ + ++ DA+ L+ M+ + FT+ L C + L+V G ++H
Sbjct: 81 LWNTMIRGLVSKDCFD-DAIHLYGSMRGGG--FLPNNFTIPFVLKACARKLDVRLGLKIH 137
Query: 149 AFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEM 208
+ +VK D F +SL+ +Y KC +++A +VF+ ++
Sbjct: 138 SLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDK------------------- 178
Query: 209 EMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSA 268
+ VSW +I+GY+ +G E + F ++ E G++ + + L+A
Sbjct: 179 --------------NVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAA 224
Query: 269 CCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSI 328
C L + + I ++ +G+ N FV++ ++D+Y KC
Sbjct: 225 CARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKC--------------------- 263
Query: 329 SSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGV 388
GN+E A F ++ EK++V W+ + GY + DL + + E +
Sbjct: 264 ----------GNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQ-MQSENL 312
Query: 389 VTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEI 448
D +V +L ACA AL G + + R + L + L+DMYSKCG++T A
Sbjct: 313 KPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWE 372
Query: 449 IFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGS 508
IF ++D V++N M+ + +GH + LF + + GI+PD TF+ +L H G
Sbjct: 373 IFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGF 432
Query: 509 VEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFL 568
V G ++FN+M + ++P +HY CM+DL GRA L +A + + ++P + +AV+ G+ L
Sbjct: 433 VNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALL 492
Query: 569 NVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNR 628
C+L+++ LA + +KL+ LE N YVQL+N+Y+ W E +IR M+ + +
Sbjct: 493 GGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQK 552
Query: 629 FAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
CSW+ ++ +H F VGD SH + IY+ L EL +
Sbjct: 553 IRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVG 596
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 114/492 (23%), Positives = 200/492 (40%), Gaps = 107/492 (21%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R L+++ L H +KAG L+ +Y K + ++ K+FD++P++NV SW
Sbjct: 126 RKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTA 185
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
II+ I S ++A A K +EM +
Sbjct: 186 IITGYISSGHFREA-----------------------------IGAFKKLLEMG-----L 211
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+ D F++ L C +L + G + ++ + + F +SL+DMY KC
Sbjct: 212 KPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKC-------- 263
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
G E NLI F PE D VSW+T+I GY NG +
Sbjct: 264 ---GNLERANLI---------------------FSAMPE-KDIVSWSTMIQGYAFNGLPQ 298
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
+ L LF +M ++ + +T LSAC L + S + +N +SNP + + ++
Sbjct: 299 QALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALI 358
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D+Y KC G++ +A F ++ +K+ VVW A
Sbjct: 359 DMYSKC-------------------------------GSVTQAWEIFTAMKKKDRVVWNA 387
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+ G + +A+F L S V K G+ D + LL C ++ G++ + R+
Sbjct: 388 MMVGLSMNGHAKAVFSLFS-LVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRV 446
Query: 422 -GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMI-ACYAHHGHEEKAI 478
+ + +VD+ + G + A + N ++ + V++ ++ C H K
Sbjct: 447 FSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLH-----KDT 501
Query: 479 LLFEEMLEKGIK 490
L E++L+K I+
Sbjct: 502 HLAEQVLKKLIE 513
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 186/658 (28%), Positives = 305/658 (46%), Gaps = 104/658 (15%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L+ + H Q + G + L+++Y+K + +S +F+ M E N SWN +IS
Sbjct: 236 SLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMIS 295
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
C + G +A LF+ M++ M
Sbjct: 296 GC--------------------------------TSNGLHLEAFDLFVRMKNGACTPNM- 322
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
+T+ S KL++V G+++ + + + ++LIDMYSKC +A VF+
Sbjct: 323 -YTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFD 381
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
N I+ WN +ISGY Q+G ++E L
Sbjct: 382 -----TNFINCGV--------------------------NTPWNAMISGYSQSGCSQEAL 410
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL-ISNPFVSSGIVDV 303
+L+V+M +NG+ + +T+ S +A ++++ + +H VLK GL + V++ I D
Sbjct: 411 ELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADA 470
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y KC G +E+ R+ FD + E+++V WT L
Sbjct: 471 YSKC-------------------------------GFLEDVRKVFDRMEERDIVSWTTLV 499
Query: 364 SGYVKAQNCE---ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
+ Y ++ E A F L+ E EG + +L +CA L G+++H + +
Sbjct: 500 TAYSQSSLGEEALATFCLMRE----EGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCK 555
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
G+ +K + S L+DMY+KCG++T A +F D+V + +I+ YA HG E A+ L
Sbjct: 556 AGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQL 615
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
F M GIK +AVT + +L A H G VE G YF M Y + PE +HYAC+IDL G
Sbjct: 616 FRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLG 675
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQ 600
R +L+ A+EF++ +P E + ++ + L CR++ N EL A K+L + A YV
Sbjct: 676 RVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVL 735
Query: 601 LANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
L+N Y G++ + +R M+ + G SW+ V+ +H F GD HP+ IY
Sbjct: 736 LSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIY 793
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Query: 395 LVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL---VDMYSKCGNMTYAEIIFQ 451
L+ +L CA + ++ K +H +L+ + DK L+ +YSKC A +F
Sbjct: 121 LIDVLRDCAEKGSIREAKAVHGLVLKSNFE-DKDLMVLFNHAAHVYSKCSEFRAACGVFD 179
Query: 452 NFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEM 511
+R++ + VMI HG F EML GI PD + AI+ + S+E+
Sbjct: 180 EMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLEL 239
Query: 512 GE 513
G+
Sbjct: 240 GK 241
>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 182/648 (28%), Positives = 306/648 (47%), Gaps = 74/648 (11%)
Query: 19 AGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNV-----FSWNTIISACIKSHDLK 73
AG++++ + L K L + R LF E +R V F N+++ K L
Sbjct: 4 AGISVSPRSYKCLFEACGKIKSLFDGR-LFHEQMQRTVKNPPEFLENSVLKMYCKCGSLA 62
Query: 74 QARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLN 133
AR +FD ++LV++N+++ Y G +F M + + + T L
Sbjct: 63 DARKVFDEMRERNLVSWNTIISAYAE-NGVFDKGFCMFSNMLELE--TKPNGSTYIGFLR 119
Query: 134 LCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLI 193
+ + G+Q+H+ +++ ++ +++ +MY KC E A VFE +E+
Sbjct: 120 SLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEK---- 175
Query: 194 SKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGEN 253
+AV+W ++ GY Q + L LF +M
Sbjct: 176 -----------------------------NAVAWTGIMVGYTQAERQMDALALFAKMVNE 206
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA 313
GV +E+ F+ L AC GL + ++IH ++K GL S V + +VD Y KC
Sbjct: 207 GVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKC------ 260
Query: 314 ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE 373
N+E A + F+ ++E N V W+AL +GY + E
Sbjct: 261 -------------------------SNLESATKAFEWISEPNDVSWSALITGYCQMGEFE 295
Query: 374 ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL 433
T+ V ++ + AC+ A + G + HA ++ + + S +
Sbjct: 296 EALKTFESLRTR-SVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAM 354
Query: 434 VDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDA 493
+ MYS+CG + YA +F++ + D V + +IA YA+ G+ +A+ LF M + G++P+A
Sbjct: 355 ITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNA 414
Query: 494 VTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMK 553
VTF+A+L+A H G V G +Y SM+++Y ++ DHY CM+D+Y RA L++A+E ++
Sbjct: 415 VTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIR 474
Query: 554 SIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAE 613
S+P DA+ L C RN E+ A E L +L+ + A Y+ + N+YA+ G W E
Sbjct: 475 SMPFSPDAMSWKCLLGGCWTYRNLEIGELAAENLFQLDPEDTAGYILMFNLYASFGKWKE 534
Query: 614 MGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+RK M + CSW+ V+ ++H F VGD HP+T IYS L
Sbjct: 535 AANVRKMMAERNLRKELSCSWITVKGKVHRFIVGDKHHPQTEEIYSKL 582
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 103/257 (40%), Gaps = 67/257 (26%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K GL L+ Y K + L + K F+ + E N SW+ +I+
Sbjct: 235 HGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALIT-------- 286
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
GY +E +ALK F +++ + ++ FT TS
Sbjct: 287 -----------------------GYCQMGEFE-EALKTFESLRT--RSVDINSFTYTSIF 320
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C L + G Q HA +K+S A S++I MYS+C + A RVFE ++ +
Sbjct: 321 QACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFES-IDDPDA 379
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
++ A++A GY G+A E LKLF RM +
Sbjct: 380 VAWTAIIA--------------------------------GYAYQGNAPEALKLFRRMQD 407
Query: 253 NGVRWNEHTFASALSAC 269
GVR N TF + L+AC
Sbjct: 408 CGVRPNAVTFIAVLTAC 424
>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 192/689 (27%), Positives = 315/689 (45%), Gaps = 105/689 (15%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
++F N +I+ K L +A LFD P ++L+++NS++ G+ + G+ +A + F +
Sbjct: 244 DLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGF-SENGFWLEAYRAFRSL 302
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
+ + + D T+ + L +C NV G +H VK ++LIDMYSKC
Sbjct: 303 LESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCG 362
Query: 175 C-------------------------YEEACRVFE------------------------- 184
C Y VFE
Sbjct: 363 CLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNL 422
Query: 185 --GCTEEVNLIS-------------------KNAMVAACCREGEMEMALKTFWRQPELND 223
C EE L+S NA +AA + G + A F+
Sbjct: 423 LPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGM-NTKS 481
Query: 224 AVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHS 283
SWN +I G+ QNGD + L + M G+ ++ + S L AC L ++ KEIH
Sbjct: 482 VSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHG 541
Query: 284 WVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEE 343
+VL+NGL N FV+ ++ +Y C Y
Sbjct: 542 FVLRNGLEMNSFVAVSLLSLYFHCSKPFYG------------------------------ 571
Query: 344 ARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACA 403
R +F+++ +KN V W A+ SGY + + L + ++ +G+ D + + +LGAC+
Sbjct: 572 -RTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLS-DGLEPDEIAIASILGACS 629
Query: 404 LQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNV 463
+AL GKE+H + L+ + D + +L+DMY+K G + +++ IF +++ +NV
Sbjct: 630 QLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNV 689
Query: 464 MIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADY 523
MI + HG KA+ LFE+M +PD TF+ +L A H G V G Y M Y
Sbjct: 690 MITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLY 749
Query: 524 KISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEA 583
K+ PE +HYAC+ID+ GRA +L +A+ F+ +P E DA I S L+ + E+ +
Sbjct: 750 KLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKF 809
Query: 584 EEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHI 643
EKLL LE N Y+ L+N+YA G W + +R++M+ + + GCSW+ + +++
Sbjct: 810 AEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYS 869
Query: 644 FTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
F G+ S+P ++ I + ++ EI
Sbjct: 870 FIAGENSNPSSDEIRKMWNRLEKQIVEIG 898
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 131/543 (24%), Positives = 228/543 (41%), Gaps = 116/543 (21%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A+K GL + N +I +Y K L E+ +LFD+MPE+N+ SWN++I
Sbjct: 233 HGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRG------- 285
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+ G+ +A + F + + + + D T+ + L
Sbjct: 286 -------------------------FSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLL 320
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+C NV G +H VK ++LIDMYSKC C EA +F E ++
Sbjct: 321 PVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRK-IENKSV 379
Query: 193 ISKNAMVAACCREG---EMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
+S N+M+ A REG E L+ W + EL +
Sbjct: 380 VSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEV------------------------- 414
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
NE T + L AC + + +H + L++ +++ + Y KC +
Sbjct: 415 --------NEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGS 466
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
+ +AE + F + K+V W A+ G+ A
Sbjct: 467 LVFAEHV-------------------------------FFGMNTKSVSSWNAVIGGH--A 493
Query: 370 QNCEALFDLLSEF-VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK 428
QN + + L F +T+ G++ D +V LL AC L GKEIH ++LR G++M+
Sbjct: 494 QNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSF 553
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
+ +L+ +Y C Y F+ +++ V +N M++ Y+ + +A+ LF +ML G
Sbjct: 554 VAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDG 613
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYF-----NSMTADYKISPETDHYAC-MIDLYGRA 542
++PD + +IL A ++ +G++ NS+ D + AC ++D+Y ++
Sbjct: 614 LEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMED-------NFVACSLMDMYAKS 666
Query: 543 NQL 545
L
Sbjct: 667 GFL 669
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 116/479 (24%), Positives = 209/479 (43%), Gaps = 76/479 (15%)
Query: 74 QARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLN 133
++R +FD +K+L +N+++ GY+ E Y+ +A+ F+E+ S E + D FT +
Sbjct: 161 ESRLVFDRLLNKNLFQWNALVSGYVRNELYD-EAIHTFLELISVTE-FQPDNFTFPCLIK 218
Query: 134 LCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLI 193
C ++ G+ +H VK F +++I +Y KC
Sbjct: 219 ACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKC-------------------- 258
Query: 194 SKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE- 252
G ++ A++ F + PE N +SWN+LI G+ +NG E + F + E
Sbjct: 259 ------------GFLDEAVELFDKMPEQN-LISWNSLIRGFSENGFWLEAYRAFRSLLES 305
Query: 253 -NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
+G+ + T + L C G NV IH +K GL+ V + ++D+Y KC
Sbjct: 306 GDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKC---- 361
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
G + EA F + K+VV W ++ Y +
Sbjct: 362 ---------------------------GCLSEAAILFRKIENKSVVSWNSMIGAYSREGF 394
Query: 372 CEALFDLLSEFVTKEGVV-TDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
FDLL + +E ++ + + ++ LL AC ++ L + +H Y LR Q + +
Sbjct: 395 VFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELIN 454
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+ + Y+KCG++ +AE +F + + +N +I +A +G KA+ + EM GI
Sbjct: 455 NAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGIL 514
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFN-------SMTADYKISPETDHYACMIDLYGRA 542
PD + V++L A G ++ G++ M + +S + ++ C YGR
Sbjct: 515 PDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRT 573
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 110/228 (48%), Gaps = 4/228 (1%)
Query: 329 SSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGV 388
+ +I YS+ G E+R FD L KN+ W AL SGYV+ + + E ++
Sbjct: 147 TRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEF 206
Query: 389 VTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEI 448
D L+ AC + +H GK +H ++MG+ MD + + ++ +Y KCG + A
Sbjct: 207 QPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVE 266
Query: 449 IFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK--GIKPDAVTFVAILSAFRHC 506
+F E++L+ +N +I ++ +G +A F +LE G+ PD T V +L
Sbjct: 267 LFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGE 326
Query: 507 GSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQL-EKAIEFMK 553
G+V++G + M + E +ID+Y + L E AI F K
Sbjct: 327 GNVDVG-MVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRK 373
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 94/218 (43%), Gaps = 36/218 (16%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
E N F +++S R+ F++ K+ V +N+ML GY E +AL LF
Sbjct: 549 EMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNE-LPNEALSLFR 607
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
+M S + + DE + S L C +L +G G+++H F +K S F SL+DMY+K
Sbjct: 608 QMLS--DGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAK 665
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
+ R+F R E+A SWN +I+
Sbjct: 666 SGFLGHSQRIFN-------------------RLNGKEVA--------------SWNVMIT 692
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACC 270
G+ +G + ++LF M + + + TF L ACC
Sbjct: 693 GFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACC 730
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 64/134 (47%), Gaps = 2/134 (1%)
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
D L + L+ MYS CG + ++F + ++L +N +++ Y + ++AI F E++
Sbjct: 142 DFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELI 201
Query: 486 E-KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
+PD TF ++ A + +G K + M + + MI LYG+
Sbjct: 202 SVTEFQPDNFTFPCLIKACTGKCDIHLG-KSVHGMAVKMGLIMDLFVGNAMIALYGKCGF 260
Query: 545 LEKAIEFMKSIPTE 558
L++A+E +P +
Sbjct: 261 LDEAVELFDKMPEQ 274
>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
Length = 857
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 193/681 (28%), Positives = 314/681 (46%), Gaps = 106/681 (15%)
Query: 50 EMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALK 109
E P + N ++S ++ ++ A +F P +D+ ++N M+ GY G+ +AL
Sbjct: 125 EHPSFGLRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGY-GKVGFLEEALD 183
Query: 110 LFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDM 169
L+ M A +R D +T L C + + GR++HA +++ +++L+ M
Sbjct: 184 LYYRMLWAG--MRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTM 241
Query: 170 YSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNT 229
Y+KC A +VF+G + D +SWN
Sbjct: 242 YAKCGDIVAARKVFDGMA---------------------------------VTDCISWNA 268
Query: 230 LISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG 289
+I+G+ +N + E GL+LF+ M EN V+ N T S A L V AKE+H + +K G
Sbjct: 269 MIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRG 328
Query: 290 LISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFD 349
+ + ++ +Y M A + +++ S ++MI GY G ++A +
Sbjct: 329 FAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYA 388
Query: 350 SLTEKN---------------------------------------VVVWTALFSGYVKAQ 370
+ N VVV AL Y K++
Sbjct: 389 LMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSK 448
Query: 371 NCEALFDLLSEFVTKEGVVT------------------------------DALILVILLG 400
+ + ++ +F+ ++ VV+ +++ + L
Sbjct: 449 HIDKAIEVF-KFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLGHVKPNSVTFIAALS 507
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL 460
ACA AL GKEIHAY+LR G+ + + + L+D+Y KCG +YA F E+D+V
Sbjct: 508 ACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVS 567
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
+N+M++ + HG + A+ LF +M+E G PD VTFVA+L A G V G + F+ MT
Sbjct: 568 WNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMT 627
Query: 521 ADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELA 580
+ I P HYACM+DL R +L +A + +P + DA + G+ LN CR++R+ EL
Sbjct: 628 EKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELG 687
Query: 581 GEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHE 640
A + +L LE N+ A +V L ++Y G WA++ R+RK MR + GCSWV V+
Sbjct: 688 ELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGV 747
Query: 641 IHIFTVGDVSHPKTNAIYSVL 661
H F D SHP+ I VL
Sbjct: 748 THAFLTDDESHPQIKEINVVL 768
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 101/235 (42%), Gaps = 32/235 (13%)
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL 460
ACA A HP ++ LR+G + ++ M + G + +A +F ERD+
Sbjct: 118 ACARADAEHP-----SFGLRLG--------NAMLSMLVRFGEIWHAWRVFAKMPERDVFS 164
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVE---MGEKYFN 517
+NVM+ Y G E+A+ L+ ML G++PD TF +L R CG + MG + +
Sbjct: 165 WNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVL---RTCGGIPDWRMGRE-VH 220
Query: 518 SMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE----DAVILGSFLNVCRL 573
+ + E D ++ +Y + + A + + + +A+I G F
Sbjct: 221 AHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHF------ 274
Query: 574 NRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNR 628
N E E L LE + + + +V A G +E+G K+M G R
Sbjct: 275 -ENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVG-FAKEMHGFAVKR 327
>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
Length = 1866
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 193/659 (29%), Positives = 307/659 (46%), Gaps = 106/659 (16%)
Query: 7 KEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPE--RNVFSWNTIIS 64
K A H Q I L N L+++Y+K + ++ LF P+ +NV SW ++I+
Sbjct: 44 KHATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLIT 103
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
+ P K L +N M + Y
Sbjct: 104 QLTRF-----------KRPFKALTFFNHMRRSGVYPNHY--------------------- 131
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
T ++ L+ C G Q+H+ + K A F VS+L+DMY+KC
Sbjct: 132 --TFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKC----------- 178
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
C +M MA K F P + + VSWNT+I G++QN ++ +
Sbjct: 179 ------------------C---DMLMAEKVFEEMP-VRNLVSWNTMIVGFLQNKLYDQAI 216
Query: 245 KLF-VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
F + EN +E +F+S SAC N++ K++H LK G+ + ++++ + D+
Sbjct: 217 FFFKTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDM 276
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y KC G + + F + ++VV W +
Sbjct: 277 YGKC-------------------------------GLFNDVAKLFSNTGARDVVTWNIMI 305
Query: 364 SGYVKAQNCEALFDLLSEF--VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
YV N E D + F + ++G + D +L +CA AAL+ G IH I+R
Sbjct: 306 MAYVYNHNYE---DACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRS 362
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
G + ++ S+L+ MY+KCG++ A IF+ +R++V + +IA HGH + LF
Sbjct: 363 GFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELF 422
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGR 541
E+ML +GIKPD +TFV++LSA H G VE G YFNSM + I P +HYAC++DL R
Sbjct: 423 EQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSR 482
Query: 542 ANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQL 601
A +L++A F++ +P + DA + G+ L+ CR + N + E KL LE +N YV L
Sbjct: 483 AGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFDLEPDNPGNYVLL 542
Query: 602 ANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSV 660
N+ G E +R++M + + GCSW+ +++ ++FTV D SH KT IY +
Sbjct: 543 CNILTRNGMLNEADEVRRKMESIGVRKEPGCSWIDIKNSTYVFTVHDKSHEKTKEIYEM 601
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 124/258 (48%), Gaps = 35/258 (13%)
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLL 319
H S S R K A +IHS ++ L+S PF+ + ++++Y KC +++ +++LL
Sbjct: 28 HPLTSLNSLLNCSRTSKHATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVD--QTLLLF 85
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLL 379
+ KNVV WT+L + + + F L
Sbjct: 86 SSAPDD---------------------------SKNVVSWTSLITQLTRFKRP---FKAL 115
Query: 380 SEF--VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMY 437
+ F + + GV + +L AC A G+++H+ + + G + ++S LVDMY
Sbjct: 116 TFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMY 175
Query: 438 SKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP-DAVTF 496
+KC +M AE +F+ R+LV +N MI + + ++AI F+ +L + + D V+F
Sbjct: 176 AKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTALDEVSF 235
Query: 497 VAILSAFRHCGSVEMGEK 514
++ SA + G++E G++
Sbjct: 236 SSVFSACANAGNLEFGKQ 253
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 105/249 (42%), Gaps = 38/249 (15%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
NL+ H A+K G+ N L +Y K L + KLF R+V +WN +I
Sbjct: 247 NLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIM 306
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
A + +H+ YE DA F M+ D
Sbjct: 307 AYVYNHN-------------------------------YE-DACNSFWMMRRKGS--IPD 332
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
E + +S L+ C L + G +H ++++ + SSLI MY+KC +A ++FE
Sbjct: 333 EASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFE 392
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTF---WRQPELNDAVSWNTLISGYVQNGDAE 241
TE+ N++ A++AAC + G ++ F R+ D +++ +++S G E
Sbjct: 393 E-TEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVE 451
Query: 242 EGLKLFVRM 250
EG F M
Sbjct: 452 EGFFYFNSM 460
Score = 45.8 bits (107), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 102/256 (39%), Gaps = 41/256 (16%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L + + H Q I++G + LI +Y+K L ++ ++F+E +RNV W II+A
Sbjct: 349 LYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAA 408
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
C G+ ++LF +M E I+ D
Sbjct: 409 C--------------------------------QQHGHANWVVELFEQM--LREGIKPDY 434
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFA-VSSLIDMYSKCRCYEEACRVFE 184
T S L+ C V G M+K G + ++D+ S+ + A R E
Sbjct: 435 ITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRFIE 494
Query: 185 GCTEEVNLISKNAMVAACCREGEM----EMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+ + A+++AC + E+ALK F +P+ + ++ L + +NG
Sbjct: 495 LMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFDLEPD--NPGNYVLLCNILTRNGML 552
Query: 241 EEGLKLFVRMGENGVR 256
E ++ +M GVR
Sbjct: 553 NEADEVRRKMESIGVR 568
>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
Length = 795
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 185/672 (27%), Positives = 316/672 (47%), Gaps = 106/672 (15%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
+++L +A+ + K GL L I N L+ +Y+K L ++++LF+ M R+V SW
Sbjct: 134 IKALEEGKAIHSRISGTK-GLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSW- 191
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
N+M+ Y + +E +A++L+ +M +
Sbjct: 192 ------------------------------NAMIAAYAQSGHFE-EAIRLYEDMD-VEPS 219
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
+R T TS L+ C L + GR++HA + + ++L+ MY++C+C ++A
Sbjct: 220 VR----TFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAA 275
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
++ F R P D VSW+ +I+ + +
Sbjct: 276 KI--------------------------------FQRLPR-RDVVSWSAMIAAFAETDLF 302
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
+E ++ + +M GVR N +TFAS L AC + +++ + +H +L NG + +
Sbjct: 303 DEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTAL 362
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
VD+Y G+++EAR FD + ++ +WT
Sbjct: 363 VDLYTS-------------------------------YGSLDEARSLFDQIENRDEGLWT 391
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
L GY K + + +L E V +I ++ ACA A ++ H+ I
Sbjct: 392 VLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEA 451
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
G+ D L ++LV+MYS+ GN+ A +F RD + + +IA YA HG A+ L
Sbjct: 452 DGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGL 511
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
++EM +G +P +TF+ +L A H G E G++ F S+ +DY + P HY+C+IDL
Sbjct: 512 YKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLS 571
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQ 600
RA +L A E + ++P E + V S L R++++ + A A ++ +L+ + A YV
Sbjct: 572 RAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVL 631
Query: 601 LANVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
L+NV+A GN A M +R M RG+K R G SW+ V +IH F VGD SHP+ I+
Sbjct: 632 LSNVHAVTGNLAGMASVRNTMVARGVKKRR--GSSWIEVADQIHEFNVGDNSHPRFQEIF 689
Query: 659 SVLAIFTGELYE 670
+ L + ++ E
Sbjct: 690 AELQRLSPKIKE 701
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 144/292 (49%), Gaps = 14/292 (4%)
Query: 273 RNVKCAKEIHSWVLKNGLISNPFVSSG-IVDVYCKCENMNYAESM---LLLKGVRNSFSI 328
R++ AK + + LK + F SSG D +C+++ + + N F
Sbjct: 3 RSLAPAK-VRRFQLKEEKAGSRFDSSGHYRDALRQCQDLESVRQIHDRISGAASANVFLG 61
Query: 329 SSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGV 388
+ ++ Y G++ AR FD++ KN W ++ + Y + + A DL +
Sbjct: 62 NEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRM----DL 117
Query: 389 VTDALILVILLGACALQAALHPGKEIHAYIL-RMGVQMDKKLISTLVDMYSKCGNMTYAE 447
+ ++ +LGACA AL GK IH+ I G+++D L ++L+ MY+KCG++ A+
Sbjct: 118 QPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAK 177
Query: 448 IIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCG 507
+F+ R + +N MIA YA GH E+AI L+E+M ++P TF ++LSA + G
Sbjct: 178 RLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLG 234
Query: 508 SVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE 559
++ G K +++ + + ++ +Y R L+ A + + +P +
Sbjct: 235 LLDQGRK-IHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRD 285
>gi|224080081|ref|XP_002306009.1| predicted protein [Populus trichocarpa]
gi|222848973|gb|EEE86520.1| predicted protein [Populus trichocarpa]
Length = 870
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 182/623 (29%), Positives = 306/623 (49%), Gaps = 44/623 (7%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
+VF WN ++S ++ +++A LF +DLV++N+++ GY + G + AL+LF E+
Sbjct: 270 DVFVWNALVSFYLRVGRVEEAELLFRRMELRDLVSWNAIIAGYA-SNGEWSKALELFHEL 328
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV-SSLIDMYSKC 173
+ D I D T+ + C + N+ G+ +H ++++ +V ++L+ Y+KC
Sbjct: 329 LTLD-MIEPDSVTLLCIIPACAQSRNLHVGKMIHGYVLRHPLLCEDTSVGNALVSFYAKC 387
Query: 174 RCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISG 233
EG E +IS+ D +SWN+++
Sbjct: 388 D-------DIEGAYETFFMISRR--------------------------DLISWNSMLDA 414
Query: 234 YVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISN 293
V++G L+L M G + T S + C + KE HS+ +++ L+++
Sbjct: 415 LVESGYNTWFLELLRWMLSEGTTPDSVTILSVVHFCVNVLKEDKVKEAHSYSIRHRLLAS 474
Query: 294 -----PFVSSGIVDVYCKCENMNYAESMLL-LKGVRNSFSISSMIVGYSLQGNMEEARRH 347
P + + I+D Y KC N+ YA + L RN + ++I GY G ++EA
Sbjct: 475 KFDVEPTIGNAILDAYAKCGNIEYASKVFQSLSENRNLVTFKAIISGYINCGLLDEAYIT 534
Query: 348 FDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAA 407
F+ + ++ VW + Y + L E + G+ DA+ ++ LL ACA A+
Sbjct: 535 FNRMPSSDLSVWNLMVRLYAENDCSSQALGLFHE-LQAHGIKPDAVTIMSLLPACAEMAS 593
Query: 408 LHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIAC 467
+ K+ H Y +R D L L D+Y+KCG++ YA +FQ +DL+++ MI
Sbjct: 594 VQLIKQCHGYAIRSCFG-DLHLDGALQDVYAKCGSIGYAFKLFQLIPNKDLIIFTAMIRG 652
Query: 468 YAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISP 527
YA HG ++A+ F M+E GIKPD V +LSA H G V+ G F S+ + +
Sbjct: 653 YAMHGMGKEALGTFFHMIELGIKPDHVIITTVLSACSHAGLVDEGLNIFYSIEKVHGMKL 712
Query: 528 ETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKL 587
+ Y+C++DL R +++ A + +P E +A I G+ L CR + EL ++L
Sbjct: 713 TMEQYSCVVDLLARGGRIDDAFSMVTGMPIEANANIWGTLLGACRTHHEVELGRFVADRL 772
Query: 588 LRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVG 647
++E N YV L+N+YAA+ W + IRK MR + AGCSW+ VE ++F G
Sbjct: 773 FKIEAENIGNYVVLSNLYAADARWDGVMEIRKLMRTRDLKKPAGCSWIEVERRKNVFVAG 832
Query: 648 DVSHPKTNAIYSVLAIFTGELYE 670
D SHP IY +L+ G++ E
Sbjct: 833 DTSHPHRIDIYRILSTLNGQIKE 855
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 144/608 (23%), Positives = 253/608 (41%), Gaps = 114/608 (18%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H ++ G + L+++Y+K L ES+KLF E+ N
Sbjct: 47 HGSIVRIGHVSCHAVSKALLNMYAKCGALDESKKLFGEIGSCN----------------- 89
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+D + +N +L GY + Y+A+ L+LF EM A+ + + T L
Sbjct: 90 -----------DRDPIFWNILLSGYAGSRVYDAETLRLFREMHGAN-YPKPSSVTAAIVL 137
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+C +L +V GR ++ + +K+ D A ++L+ MY+KC L
Sbjct: 138 PVCARLGDVYMGRSVNCYAIKSGLDTHTLAGNALVSMYAKC-----------------GL 180
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+ ++A A + + D VSWN +ISG+ +N E+ +LF M +
Sbjct: 181 VCQDAYAA---------------FDSIDEKDVVSWNAIISGFAENNLMEDAFRLFSSMLK 225
Query: 253 NGVRWNEHTFASALSACCGLRNVKC---AKEIHSWVLK-NGLISNPFVSSGIVDVYCKCE 308
++ N T A+ L C KEIH +VL+ N L+++ FV + +V Y +
Sbjct: 226 GQIKPNYTTLANILPVCASFDEYIAYWFGKEIHGYVLRHNELLADVFVWNALVSFYLRV- 284
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
G +EEA F + +++V W A+ +GY
Sbjct: 285 ------------------------------GRVEEAELLFRRMELRDLVSWNAIIAGYAS 314
Query: 369 AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM-DK 427
+L E +T + + D++ L+ ++ ACA LH GK IH Y+LR + D
Sbjct: 315 NGEWSKALELFHELLTLDMIEPDSVTLLCIIPACAQSRNLHVGKMIHGYVLRHPLLCEDT 374
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
+ + LV Y+KC ++ A F RDL+ +N M+ G+ + L ML +
Sbjct: 375 SVGNALVSFYAKCDDIEGAYETFFMISRRDLISWNSMLDALVESGYNTWFLELLRWMLSE 434
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNS---------MTADYKISPETDHYACMIDL 538
G PD+VT ILS C +V +K + + + + + P + ++D
Sbjct: 435 GTTPDSVT---ILSVVHFCVNVLKEDKVKEAHSYSIRHRLLASKFDVEPTIGN--AILDA 489
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARY 598
Y + +E A + +S+ + V +F + N L EA R+ ++ + +
Sbjct: 490 YAKCGNIEYASKVFQSLSENRNLV---TFKAIISGYINCGLLDEAYITFNRMPSSDLSVW 546
Query: 599 VQLANVYA 606
+ +YA
Sbjct: 547 NLMVRLYA 554
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 121/281 (43%), Gaps = 53/281 (18%)
Query: 226 SWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWV 285
+WNT+IS NGD R + AS L +C GL +K + +H +
Sbjct: 8 AWNTMISD--CNGD---------------FRQDYQAVASILKSCAGLSAIKWGRALHGSI 50
Query: 286 LKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEAR 345
++ G +S VS ++++Y KC G ++E++
Sbjct: 51 VRIGHVSCHAVSKALLNMYAKC-------------------------------GALDESK 79
Query: 346 RHF---DSLTEKNVVVWTALFSGYVKAQNCEA-LFDLLSEFVTKEGVVTDALILVILLGA 401
+ F S +++ + W L SGY ++ +A L E ++ I+L
Sbjct: 80 KLFGEIGSCNDRDPIFWNILLSGYAGSRVYDAETLRLFREMHGANYPKPSSVTAAIVLPV 139
Query: 402 CALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTY-AEIIFQNFIERDLVL 460
CA ++ G+ ++ Y ++ G+ + LV MY+KCG + A F + E+D+V
Sbjct: 140 CARLGDVYMGRSVNCYAIKSGLDTHTLAGNALVSMYAKCGLVCQDAYAAFDSIDEKDVVS 199
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
+N +I+ +A + E A LF ML+ IKP+ T IL
Sbjct: 200 WNAIISGFAENNLMEDAFRLFSSMLKGQIKPNYTTLANILP 240
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 106/223 (47%), Gaps = 9/223 (4%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPE-RNVFSWNTIISACIKSHDLKQARSLFDSSPHKDL 87
N ++ Y+K + + K+F + E RN+ ++ IIS I L +A F+ P DL
Sbjct: 484 NAILDAYAKCGNIEYASKVFQSLSENRNLVTFKAIISGYINCGLLDEAYITFNRMPSSDL 543
Query: 88 VTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQL 147
+N M+ Y + + AL LF E+Q+ I+ D T+ S L C ++ +V +Q
Sbjct: 544 SVWNLMVRLYAENDC-SSQALGLFHELQA--HGIKPDAVTIMSLLPACAEMASVQLIKQC 600
Query: 148 HAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGE 207
H + +++ +L D+Y+KC A ++F+ + +LI AM+ G
Sbjct: 601 HGYAIRSCFGDLHLD-GALQDVYAKCGSIGYAFKLFQLIPNK-DLIIFTAMIRGYAMHGM 658
Query: 208 MEMALKTFWRQPELN---DAVSWNTLISGYVQNGDAEEGLKLF 247
+ AL TF+ EL D V T++S G +EGL +F
Sbjct: 659 GKEALGTFFHMIELGIKPDHVIITTVLSACSHAGLVDEGLNIF 701
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF---I 454
+L +CA +A+ G+ +H I+R+G + L++MY+KCG + ++ +F
Sbjct: 30 ILKSCAGLSAIKWGRALHGSIVRIGHVSCHAVSKALLNMYAKCGALDESKKLFGEIGSCN 89
Query: 455 ERDLVLYNVMIACYA-HHGHEEKAILLFEEMLEKGI-KPDAVTFVAILSAFRHCGSVEMG 512
+RD + +N++++ YA ++ + + LF EM KP +VT +L G V MG
Sbjct: 90 DRDPIFWNILLSGYAGSRVYDAETLRLFREMHGANYPKPSSVTAAIVLPVCARLGDVYMG 149
Query: 513 EKYFNSMTADYKISPETDHYACMIDLYGRANQL-EKAIEFMKSIPTEEDAVILGSFLNVC 571
+ N + T ++ +Y + + + A SI E+D V
Sbjct: 150 -RSVNCYAIKSGLDTHTLAGNALVSMYAKCGLVCQDAYAAFDSI-DEKDVV--------- 198
Query: 572 RLNRNAELAGEAEEKLLR---------LEGNNKARYVQLANV 604
+ NA ++G AE L+ L+G K Y LAN+
Sbjct: 199 --SWNAIISGFAENNLMEDAFRLFSSMLKGQIKPNYTTLANI 238
>gi|218194084|gb|EEC76511.1| hypothetical protein OsI_14286 [Oryza sativa Indica Group]
Length = 656
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 183/635 (28%), Positives = 303/635 (47%), Gaps = 74/635 (11%)
Query: 67 IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEF 126
+KS L A LFD P K++V + S++ G EA AL +F +M + + ++F
Sbjct: 59 VKSGRLADALDLFDRMPRKNVVAWTSVMSGCTRNGRPEA-ALAMFADM--VESGVAPNDF 115
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
+ L C L + G Q+H+ V+ + S LI+MYS+C
Sbjct: 116 ACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRC------------- 162
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
G + A + F R + D V + +LIS + +NG+ E +
Sbjct: 163 -------------------GSLPAAKEVFDRM-DSPDVVGYTSLISAFCRNGEFELAAEA 202
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKN-GLISNP-FVSSGIVDVY 304
++M + G++ NEHT + L+AC + ++IH +++K GL S + S+ ++D Y
Sbjct: 203 LIQMLKQGLKPNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQSVYSSTALIDFY 258
Query: 305 CKCENMNYAESML------------------------LLKGVRNSFSISSMIVGYSLQGN 340
+ E ++ E L L+ +R S ++ SM Y G
Sbjct: 259 SRNEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITDIRVSNALLSM---YGRTGL 315
Query: 341 MEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLG 400
+EE + + ++V WT S + E LL + + EG + +L
Sbjct: 316 VEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQ-MHSEGFTPNGYAFSSVLS 374
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL 460
+CA A+L G + H L++G + + L++MYSKCG M A + F D+
Sbjct: 375 SCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTS 434
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
+N +I +A HG KA+ +F +M GIKPD TF+ +L H G VE GE +F M
Sbjct: 435 WNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMI 494
Query: 521 ADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELA 580
Y +P HYACMID+ GR + ++A+ + +P E DA+I + L C+L+RN ++
Sbjct: 495 DQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIG 554
Query: 581 GEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHE 640
A ++L+ L + A YV ++N+YA G W + ++R++M + AGCSW+ + +E
Sbjct: 555 KLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEINNE 614
Query: 641 IHIFTVGDVSHPKTNAIYSVLAIFTGELYEIAGAF 675
+H F D+SHP +++IY +L GEL + F
Sbjct: 615 VHTFASRDMSHPNSDSIYQML----GELVAVMQDF 645
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 175/385 (45%), Gaps = 26/385 (6%)
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
GC E +++ + + + G + AL F R P N V+W +++SG +NG E L
Sbjct: 41 GCAESPDVVLECKRLNRLVKSGRLADALDLFDRMPRKN-VVAWTSVMSGCTRNGRPEAAL 99
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
+F M E+GV N+ +AL AC L ++ +++HS ++ G + ++ S ++++Y
Sbjct: 100 AMFADMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMY 159
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNV-------- 356
+C ++ A+ + + +S+I + G E A + ++ +
Sbjct: 160 SRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMT 219
Query: 357 VVWTAL-------FSGY------VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACA 403
+ TA GY +++Q+ + L+ + EGV + L I+LGAC
Sbjct: 220 TILTACPRVLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNEGVDPNEFALSIVLGAC- 278
Query: 404 LQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNV 463
++ G+++H ++ + D ++ + L+ MY + G + E + DLV +
Sbjct: 279 --GSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTT 336
Query: 464 MIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADY 523
I+ +G EKAI L +M +G P+ F ++LS+ S++ G + F+ +
Sbjct: 337 AISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQ-FHCLALKL 395
Query: 524 KISPETDHYACMIDLYGRANQLEKA 548
E +I++Y + Q+ A
Sbjct: 396 GCDSEICTGNALINMYSKCGQMGSA 420
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 119/515 (23%), Positives = 211/515 (40%), Gaps = 81/515 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A++AG + LI +YS+ L ++++FD M +V + ++ISA ++ +
Sbjct: 137 HSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEF 196
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+ A A+AL +Q + ++ +E T+T+ L
Sbjct: 197 ELA-----------------------------AEAL-----IQMLKQGLKPNEHTMTTIL 222
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSN--DASGFAVSSLIDMYSKCRCYEE----------AC 180
C ++L G+Q+H +++K S ++ ++LID YS+ + AC
Sbjct: 223 TACPRVL----GQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNEGVDPNEFALSIVLGAC 278
Query: 181 ------RVFEGCTEEVNLIS----KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTL 230
R + +LI+ NA+++ R G +E L+ + E D VSW T
Sbjct: 279 GSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVE-ELEAMLNKIENPDLVSWTTA 337
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL 290
IS QNG E+ + L +M G N + F+S LS+C + ++ + H LK G
Sbjct: 338 ISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGC 397
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
S + ++++Y KC M A + + S +S+I G++ G+ +A F
Sbjct: 398 DSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSK 457
Query: 351 LTEKNVVVWTALFSGYVKAQN-------CEALFDLLSEFVTKEGVVTDALILVILLGACA 403
+ + + F G + N E F L+ + + + ++ +LG
Sbjct: 458 MRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLG--- 514
Query: 404 LQAALHPGK--EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIE---RDL 458
G+ E I M + D + TL+ N+ ++ +E RD
Sbjct: 515 -----RNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDS 569
Query: 459 VLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDA 493
Y +M YA HG E A + M E G+K DA
Sbjct: 570 ASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDA 604
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 112/274 (40%), Gaps = 48/274 (17%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L + + H A+K G T N LI++YSK + +R FD M +V SWN++I
Sbjct: 381 SLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIH 440
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
+ D + AL++F +M+S I+ D
Sbjct: 441 GHAQHGDANK--------------------------------ALEVFSKMRS--NGIKPD 466
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMV-KTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
+ T L C V G M+ + S + + +IDM + ++EA R+
Sbjct: 467 DSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMI 526
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN--DAVSWNTLISGYVQNGDAE 241
E + + ++A+C +++ R EL+ D+ S+ + + Y +G+ E
Sbjct: 527 NDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWE 586
Query: 242 EGLKLFVRMGENGVR------WNE-----HTFAS 264
+ K+ RM E GV+ W E HTFAS
Sbjct: 587 DARKVRRRMDETGVKKDAGCSWIEINNEVHTFAS 620
>gi|124360491|gb|ABN08501.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 575
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 168/522 (32%), Positives = 275/522 (52%), Gaps = 21/522 (4%)
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
D + L + K + F R+L M D + + +I Y KC EEA +F
Sbjct: 61 DHYVRNGILGIYAKYGPIEFARKLFDEM----PDRTVADWNVMISGYWKCGNEEEASTLF 116
Query: 184 EGCTEE---VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
++ N+I+ M+ ++G ++ A F + PE VSWN ++SGY Q G
Sbjct: 117 HVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPE-RSVVSWNAMLSGYAQGGAP 175
Query: 241 EEGLKLFVRMGENG-VRWNEHTFASALSACCGLRNVKCAKE--IHSWVLKNGLISNPFVS 297
EE ++LF M G V+ +E T+A+ +S+C L + C E + K G N FV
Sbjct: 176 EETIRLFNDMLSPGNVQPDETTWATVISSCSSLGD-PCLSESIVRKLDDKVGFRPNYFVK 234
Query: 298 SGIVDVYCKCENMNYAESMLLLKGV---RNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
+ ++D++ KC N+ A + GV R+S ++MI Y+ G++ A+ FD + ++
Sbjct: 235 TALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQR 294
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGV-VTDALILVILLGACALQAALHPGKE 413
+ V W ++ +GY + L E ++ E D + +V + AC L G
Sbjct: 295 DTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNW 354
Query: 414 IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH 473
+ + +Q+ + ++L++MYS+CG+M A +IFQ RDLV YN +I+ +A HGH
Sbjct: 355 AVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGH 414
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA 533
++I L +M E GI+PD +T++AIL+A H G ++ G++ F S+ P+ DHYA
Sbjct: 415 GMESIELLSKMKEDGIEPDRITYIAILTACSHAGLLDEGQRLFESIKF-----PDVDHYA 469
Query: 534 CMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGN 593
CMID+ GRA +LE+A++ ++S+P E A I GS LN +++ EL A KL ++E +
Sbjct: 470 CMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAKLFKVEPH 529
Query: 594 NKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWV 635
N Y L+N+YA+ G W E ++R MR + G SW+
Sbjct: 530 NSGNYALLSNIYASAGRWKEGDKVRDTMRKQGVKKTTGLSWL 571
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 148/595 (24%), Positives = 267/595 (44%), Gaps = 130/595 (21%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPER------------- 54
E+++ +K+G N ++ IY+K+ + +RKLFDEMP+R
Sbjct: 45 ESMLFLAHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYW 104
Query: 55 ----------------------NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNS 92
NV +W T+I+ K +LK AR FD P + +V++N+
Sbjct: 105 KCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNA 164
Query: 93 MLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMV 152
ML GY G + ++LF +M S +++ DE T + ++ C L + + V
Sbjct: 165 MLSGYAQG-GAPEETIRLFNDMLSPG-NVQPDETTWATVISSCSSLGDPCLSESI----V 218
Query: 153 KTSNDASG-----FAVSSLIDMYSKCRCYEEACRVFE--GCTEEVNLISKNAMVAACCRE 205
+ +D G F ++L+DM++KC E A ++FE G + + + NAM++A R
Sbjct: 219 RKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARV 278
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM--GENGVRWNEHTFA 263
G++ A F + P+ D VSWN++I+GY QNG++ + +KLF M E+ + +E T
Sbjct: 279 GDLPSAKHLFDKMPQ-RDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMV 337
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
S SAC L + N+A S+L + ++
Sbjct: 338 SVFSACGHLGELGLG--------------------------------NWAVSILKVNHIQ 365
Query: 324 NSFSI-SSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF 382
S S+ +S+I YS G+M++A F + +++V + L SG+ + + +LLS+
Sbjct: 366 ISISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSK- 424
Query: 383 VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGN 442
+ ++G+ D + + +L AC+ HA +L G ++
Sbjct: 425 MKEDGIEPDRITYIAILTACS-----------HAGLLDEGQRL----------------- 456
Query: 443 MTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
F++ D+ Y MI G E+A+ L + M ++P A + ++L+A
Sbjct: 457 -------FESIKFPDVDHYACMIDMLGRAGRLEEAMKLIQSM---PMEPHAGIYGSLLNA 506
Query: 503 FRHCGSVEMGEKYFNSMTADYKISPE-TDHYACMIDLY---GRANQLEKAIEFMK 553
VE+GE + +K+ P + +YA + ++Y GR + +K + M+
Sbjct: 507 TSIHKQVELGELAAAKL---FKVEPHNSGNYALLSNIYASAGRWKEGDKVRDTMR 558
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 149/347 (42%), Gaps = 73/347 (21%)
Query: 285 VLKNGLISNPFVSSGIVDVYC-------------------------------KCENMNYA 313
VLK+G + +V +GI+ +Y KC N A
Sbjct: 53 VLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEA 112
Query: 314 ESMLLLKG----VRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
++ + G RN + ++MI G++ +GN++ AR +FD + E++VV W A+ SGY +
Sbjct: 113 STLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQG 172
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGAC-ALQAALHPGKEIHAYILRMGVQMDKK 428
E L ++ ++ V D ++ +C +L + ++G + +
Sbjct: 173 GAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYF 232
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNF----------------------------------I 454
+ + L+DM++KCGN+ A IF+
Sbjct: 233 VKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMP 292
Query: 455 ERDLVLYNVMIACYAHHGHEEKAILLFEEML--EKGIKPDAVTFVAILSAFRHCGSVEMG 512
+RD V +N MIA Y +G KAI LFEEM+ E KPD VT V++ SA H G + +G
Sbjct: 293 QRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLG 352
Query: 513 EKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE 559
+ + ++ I Y +I++Y R ++ A+ + + T +
Sbjct: 353 NWAVSILKVNH-IQISISVYNSLINMYSRCGSMQDAVLIFQEMATRD 398
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 69/140 (49%), Gaps = 5/140 (3%)
Query: 416 AYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEE 475
A++L+ G D + + ++ +Y+K G + +A +F +R + +NVMI+ Y G+EE
Sbjct: 51 AHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEE 110
Query: 476 KAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACM 535
+A LF M ++ I + +T+ +++ G+++ YF+ M +S + M
Sbjct: 111 EASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVS-----WNAM 165
Query: 536 IDLYGRANQLEKAIEFMKSI 555
+ Y + E+ I +
Sbjct: 166 LSGYAQGGAPEETIRLFNDM 185
>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 190/636 (29%), Positives = 299/636 (47%), Gaps = 101/636 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K GL N L+ +Y K +++SR++FDE+ ERN SWN II++
Sbjct: 132 HCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSLAYLERN 191
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+ A +F +L I D ++ + T +S L
Sbjct: 192 QDALEMF-----------------------------RLMI-----DGGVKPNSVTFSSML 217
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ V+L FG+++H F ++ ++ F ++LIDMY+K +A VF E+ N+
Sbjct: 218 PVLVELKLFDFGKEIHGFSLRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEK-NI 276
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+S NAMVA + +E+A RQ M
Sbjct: 277 VSWNAMVANFA-QNRLELAAVDLVRQ-------------------------------MQA 304
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+G N TF + L AC + ++ KEIH+ ++ G + FVS+ + D+Y KC +N
Sbjct: 305 DGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNL 364
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
A + + +R+ S + +I+GYS N E+ R F + K
Sbjct: 365 ARRVFKIS-LRDEVSYNILIIGYSQTTNCSESLRLFLEMGIK------------------ 405
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
G+ D + + ++ ACA AAL GKE+H +R + + +
Sbjct: 406 --------------GMKLDVVSYMGVISACANLAALKQGKEVHGLAVRKHLHTHLFIANA 451
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
L+D Y KCG + A +F+ RD +N MI Y G AI LFE M E G++ D
Sbjct: 452 LLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGELTIAINLFEAMKEDGVEYD 511
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
+V+++A+LSA H G VE G+KYF M I P HYACM+DL GRA +E+A++ +
Sbjct: 512 SVSYIAVLSACSHGGLVEEGKKYFEHMQVQ-NIKPTQMHYACMVDLLGRAGLIEEAVKLI 570
Query: 553 KSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWA 612
+S+P E DA + G+ L CR++ ELA A E L +L+ + Y L+N+YA G W
Sbjct: 571 ESLPIEPDANVWGALLGACRIHGYIELAHWAAEHLFKLKPQHSGYYSVLSNMYAEAGKWD 630
Query: 613 EMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGD 648
E ++RK M+ + GCSWV +++++H F G+
Sbjct: 631 EANQVRKLMKSRGAKKNPGCSWVQIDNQVHAFVAGE 666
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 145/559 (25%), Positives = 256/559 (45%), Gaps = 100/559 (17%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTI 62
SL++++ H K G N L+ Y L++ +++FDEM ER+V SWN++
Sbjct: 20 SLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKRVFDEMLERDVVSWNSV 79
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
I G + G+ A+A+ LF EM + R
Sbjct: 80 I--------------------------------GVFSVHGFYAEAIHLFCEM-NLRSGFR 106
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
+ ++ S L +C L + GRQ+H ++VKT D+ ++L+D+Y KC +++ RV
Sbjct: 107 PNMVSIVSVLPVCAGLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRV 166
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
F+ +E + VSWN +I+ ++
Sbjct: 167 FDEISER---------------------------------NGVSWNAIITSLAYLERNQD 193
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
L++F M + GV+ N TF+S L L+ KEIH + L+ GL S+ FV++ ++D
Sbjct: 194 ALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFVANALID 253
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
+Y K G SLQ A F+ + EKN+V W A+
Sbjct: 254 MYAKS--------------------------GRSLQ-----ASNVFNQIGEKNIVSWNAM 282
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
+ + + + A DL+ + + +G + +++ +L ACA L PGKEIHA +R G
Sbjct: 283 VANFAQNRLELAAVDLVRQ-MQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTG 341
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
+D + + L DMY+KCG + A +F+ + RD V YN++I Y+ + +++ LF
Sbjct: 342 SSVDLFVSNALTDMYAKCGCLNLARRVFKISL-RDEVSYNILIIGYSQTTNCSESLRLFL 400
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRA 542
EM KG+K D V+++ ++SA + +++ G K + + + ++D Y +
Sbjct: 401 EMGIKGMKLDVVSYMGVISACANLAALKQG-KEVHGLAVRKHLHTHLFIANALLDFYIKC 459
Query: 543 NQLEKAIEFMKSIPTEEDA 561
+++ A + + IP+ + A
Sbjct: 460 GRIDLAGKVFRQIPSRDTA 478
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 176/398 (44%), Gaps = 72/398 (18%)
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
+R+D+ T L C L+V GR++H + K D+ F ++L+ Y C ++
Sbjct: 3 VRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVK 62
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
RVF+ E D VSWN++I + +G
Sbjct: 63 RVFDEMLER---------------------------------DVVSWNSVIGVFSVHGFY 89
Query: 241 EEGLKLFVRMG-ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
E + LF M +G R N + S L C GL + ++IH +V+K GL S V +
Sbjct: 90 AEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQIHCYVVKTGLDSQVTVGNA 149
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
+VDVY KC G ++++RR FD ++E+N V W
Sbjct: 150 LVDVYGKC-------------------------------GYVKDSRRVFDEISERNGVSW 178
Query: 360 TALFSGYV---KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHA 416
A+ + + Q+ +F L+ + K VT + +L +L+ GKEIH
Sbjct: 179 NAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVEL----KLFDFGKEIHG 234
Query: 417 YILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
+ LR G++ D + + L+DMY+K G A +F E+++V +N M+A +A + E
Sbjct: 235 FSLRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELA 294
Query: 477 AILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
A+ L +M G P++VTF +L A G + G++
Sbjct: 295 AVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKE 332
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 135/292 (46%), Gaps = 34/292 (11%)
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA 313
GVR ++HTF L AC +V+ +EIH V K G S+ FV + ++ Y C
Sbjct: 2 GVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNC------ 55
Query: 314 ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY-VKAQNC 372
G +++ +R FD + E++VV W ++ + V
Sbjct: 56 -------------------------GGLKDVKRVFDEMLERDVVSWNSVIGVFSVHGFYA 90
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
EA+ L E + G + + +V +L CA G++IH Y+++ G+ + +
Sbjct: 91 EAI-HLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQIHCYVVKTGLDSQVTVGNA 149
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
LVD+Y KCG + + +F ER+ V +N +I A+ + A+ +F M++ G+KP+
Sbjct: 150 LVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSLAYLERNQDALEMFRLMIDGGVKPN 209
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
+VTF ++L + G K + + + + + +ID+Y ++ +
Sbjct: 210 SVTFSSMLPVLVELKLFDFG-KEIHGFSLRFGLESDIFVANALIDMYAKSGR 260
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 95/196 (48%), Gaps = 8/196 (4%)
Query: 387 GVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYA 446
GV D +L ACA ++ G+EIH + ++G D + +TL+ Y CG +
Sbjct: 2 GVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDV 61
Query: 447 EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM-LEKGIKPDAVTFVAILSAFRH 505
+ +F +ERD+V +N +I ++ HG +AI LF EM L G +P+ V+ V++L
Sbjct: 62 KRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPV--- 118
Query: 506 CGSVEMG--EKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVI 563
C +E G + + + + ++D+YG+ ++ + I +E + V
Sbjct: 119 CAGLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEI-SERNGVS 177
Query: 564 LGSFL-NVCRLNRNAE 578
+ + ++ L RN +
Sbjct: 178 WNAIITSLAYLERNQD 193
>gi|359480506|ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 590
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 161/518 (31%), Positives = 280/518 (54%), Gaps = 15/518 (2%)
Query: 140 NVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMV 199
N+G RQL M + +S+I Y K C++E+ R+F G N++S N+M+
Sbjct: 62 NIGAARQLFDEMPHRDT----VSWNSIITGYWKNGCFDESKRLF-GLMPTKNVVSWNSMI 116
Query: 200 AACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNE 259
A C + ++ A + F P+ N A SWN +ISG V+ EE +LF M R N
Sbjct: 117 AGCIEDERIDEAWQYFQAMPQRNTA-SWNAMISGLVRYDRVEEASRLFEEMP----RRNV 171
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLL 319
++ + + + ++ A+ + + + + ++S + SG Y + + AE++
Sbjct: 172 ISYTAMVDGYAKIGEIEQARALFNCMPQKNVVSWTVMISG----YVENGKFDEAENLFEQ 227
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLL 379
+N ++++MI GY +G ++A+ FD + +++ W A+ +GY + + E L
Sbjct: 228 MPDKNIVAMTAMITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLH 287
Query: 380 SEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
S+ + K G+ D L+ +L AC+ A+L G++ H +L+ G + + + L+ MY K
Sbjct: 288 SQML-KMGMQPDHSTLISVLTACSSLASLQEGRKTHVLVLKSGYESRISICNALITMYCK 346
Query: 440 CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
CG++ +E+ F+ D+V +N MIA +A HG ++A+ F EM ++PD +TF+++
Sbjct: 347 CGSILDSELAFRQIDHPDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSL 406
Query: 500 LSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE 559
LSA H G V +FNSM YKI P +H+AC++D+ R Q+EKA + ++ +P E
Sbjct: 407 LSACGHAGKVHESLNWFNSMIESYKIVPRPEHFACLVDILSRGGQVEKAYKIIQEMPFEA 466
Query: 560 DAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRK 619
D I G+ L C ++ N +L A +K++ LE N YV L+N+YAA G W E+ R+R
Sbjct: 467 DCGIWGALLAACHVHLNVKLGELAAKKIVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRG 526
Query: 620 QMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
MR + SW+ +++++H F D SHP+ + I
Sbjct: 527 LMREQGVKKQPAYSWMEIDNKVHFFLGDDASHPEIHRI 564
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 114/449 (25%), Positives = 209/449 (46%), Gaps = 48/449 (10%)
Query: 25 TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPH 84
T++ N +I Y K+ ES++LF MP +NV SWN++I+ CI+ + +A F + P
Sbjct: 78 TVSWNSIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYFQAMPQ 137
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
++ ++N+M+ G + + E +A +LF EM R + + T+ ++ K+ +
Sbjct: 138 RNTASWNAMISGLVRYDRVE-EASRLFEEMP------RRNVISYTAMVDGYAKIGEIEQA 190
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
R L F + + V +I Y + ++EA +FE ++ N+++ AM+ C+
Sbjct: 191 RAL--FNCMPQKNVVSWTV--MISGYVENGKFDEAENLFEQMPDK-NIVAMTAMITGYCK 245
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFAS 264
EG+ + A K + Q D SWN +I+GY QNG EE LKL +M + G++ + T S
Sbjct: 246 EGKTDKA-KILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLIS 304
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
L+AC L +++ ++ H VLK+G S + + ++ +YCKC
Sbjct: 305 VLTACSSLASLQEGRKTHVLVLKSGYESRISICNALITMYCKC----------------- 347
Query: 325 SFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVT 384
G++ ++ F + +VV W A+ + + + + E +
Sbjct: 348 --------------GSILDSELAFRQIDHPDVVSWNAMIAAFARHGFYDRALASFGEMRS 393
Query: 385 KEGVVTDALILVILLGACALQAALHPG-KEIHAYILRMGVQMDKKLISTLVDMYSKCGNM 443
V D + + LL AC +H ++ I + + + LVD+ S+ G +
Sbjct: 394 NR-VEPDGITFLSLLSACGHAGKVHESLNWFNSMIESYKIVPRPEHFACLVDILSRGGQV 452
Query: 444 TYAEIIFQNF-IERDLVLYNVMI-ACYAH 470
A I Q E D ++ ++ AC+ H
Sbjct: 453 EKAYKIIQEMPFEADCGIWGALLAACHVH 481
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/288 (20%), Positives = 121/288 (42%), Gaps = 34/288 (11%)
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
N + + L ++ ++ + I + GN+ AR+ FD + ++ V W ++ +GY K
Sbjct: 31 NRQFHPLSIKLFSTQDVYAFNVQIGNLARAGNIGAARQLFDEMPHRDTVSWNSIITGYWK 90
Query: 369 AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALH----PGKEIHAY------- 417
+ L TK V +++I + +A + P + ++
Sbjct: 91 NGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYFQAMPQRNTASWNAMISGL 150
Query: 418 --------ILRMGVQMDKKLI---STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIA 466
R+ +M ++ + + +VD Y+K G + A +F ++++V + VMI+
Sbjct: 151 VRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQARALFNCMPQKNVVSWTVMIS 210
Query: 467 CYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKIS 526
Y +G ++A LFE+M +K I V A+++ + G + + F+ +
Sbjct: 211 GYVENGKFDEAENLFEQMPDKNI----VAMTAMITGYCKEGKTDKAKILFDQIPCR---- 262
Query: 527 PETDHYACMIDLYGRANQLEKAIEF---MKSIPTEEDAVILGSFLNVC 571
+ + MI Y + E+A++ M + + D L S L C
Sbjct: 263 -DLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTAC 309
Score = 39.3 bits (90), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 16/205 (7%)
Query: 7 KEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRK----LFDEMPERNVFSWNTI 62
+EAL H Q +K G+ T ++ S L+E RK + E + N +
Sbjct: 281 EEALKLHSQMLKMGMQPDHSTLISVLTACSSLASLQEGRKTHVLVLKSGYESRISICNAL 340
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
I+ K + + F H D+V++N+M+ + G+ AL F EM+S +
Sbjct: 341 ITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAAFAR-HGFYDRALASFGEMRS--NRVE 397
Query: 123 MDEFTVTSTLNLCVKLLNV-----GFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYE 177
D T S L+ C V F + ++ K FA L+D+ S+ E
Sbjct: 398 PDGITFLSLLSACGHAGKVHESLNWFNSMIESY--KIVPRPEHFAC--LVDILSRGGQVE 453
Query: 178 EACRVFEGCTEEVNLISKNAMVAAC 202
+A ++ + E + A++AAC
Sbjct: 454 KAYKIIQEMPFEADCGIWGALLAAC 478
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 179/599 (29%), Positives = 294/599 (49%), Gaps = 67/599 (11%)
Query: 75 ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNL 134
A S+F + D++T+NSML ++N+ AL+ + EM ++ D FT S L
Sbjct: 31 AYSVFAHTRELDVLTWNSMLRAFVNSN-MPRRALQSYTEMLERSRNVP-DRFTFPSLLKG 88
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
C LL G+ LH +VK + + ++L++MY+ C
Sbjct: 89 CALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAAC--------------------- 127
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
G+++ A F R N V W ++ISGY++N E L L+ +M E+G
Sbjct: 128 -----------GDLKSARFLFERMGHRNKVV-WTSMISGYMKNHCPNEALLLYKKMEEDG 175
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
+E T A+ +SAC L+++ ++HS + + + + S +V++Y KC
Sbjct: 176 FSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKC------- 228
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEA 374
G+++ AR+ FD L++K+V W+AL GYVK
Sbjct: 229 ------------------------GDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTE 264
Query: 375 LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLV 434
L E + + + ++ ++ ACA L G+ +H YI R L ++L+
Sbjct: 265 ALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLI 324
Query: 435 DMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAV 494
DM+SKCG++ A+ IF + +DL+ +N M+ +A HG +A+ F M ++PD +
Sbjct: 325 DMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEI 384
Query: 495 TFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKS 554
TF+ +L+A H G V+ G+K F + A Y + +++HY CM+DL RA L +A EF++
Sbjct: 385 TFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRV 444
Query: 555 IPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEM 614
+P + D I GS L CR+ N EL EA LL+LE N Y+ L+N+YA W E+
Sbjct: 445 MPLQPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEV 504
Query: 615 GRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIAG 673
++R+ M + GCS V +++ H F GD SHP+ I S++ E ++AG
Sbjct: 505 KKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEI-SIMLRQVREKLKLAG 562
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/495 (21%), Positives = 209/495 (42%), Gaps = 109/495 (22%)
Query: 4 LNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
L K + H Q +K L L+++Y+ L+ +R LF+ M RN W ++I
Sbjct: 93 LEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMI 152
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
S +K+H P++ L+ Y M +G+
Sbjct: 153 SGYMKNH-----------CPNEALLLYKKM-----EEDGFSP------------------ 178
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
DE T+ + ++ C +L ++G G +LH+ + + S+L++MY+KC + A +VF
Sbjct: 179 DEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVF 238
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
+ +++ D +W+ LI GYV+N + E
Sbjct: 239 DKLSDK---------------------------------DVYAWSALIFGYVKNNRSTEA 265
Query: 244 LKLFVRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
L+LF + G + +R NE T + +SAC L +++ + +H ++ + + +++ ++D
Sbjct: 266 LQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLID 325
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
++ KC G+++ A+R FDS++ K+++ W ++
Sbjct: 326 MFSKC-------------------------------GDIDAAKRIFDSMSYKDLISWNSM 354
Query: 363 FSGY-VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+G+ + EAL + + D + + +L AC+ + GK++ I +
Sbjct: 355 VNGFALHGLGREALAQF--RLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEAL 412
Query: 422 -GVQMDKKLISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMI-ACYAHH----GHE 474
GV++ + +VD+ + G + A E I ++ D ++ M+ AC ++ G E
Sbjct: 413 YGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEE 472
Query: 475 EKAILLFEEMLEKGI 489
LL E G+
Sbjct: 473 AARFLLKLEPTNDGV 487
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 19/264 (7%)
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLL 379
K + + S+ S+ VGY A F E +V+ W ++ +V +
Sbjct: 15 KLIAHVLSMGSLGVGY--------AYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSY 66
Query: 380 SEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
+E + + V D LL CAL GK +H +++ + D + +TL++MY+
Sbjct: 67 TEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAA 126
Query: 440 CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
CG++ A +F+ R+ V++ MI+ Y + +A+LL+++M E G PD VT +
Sbjct: 127 CGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATL 186
Query: 500 LSAFRHCGSVEMGEKYFNSMT-ADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE 558
+SA + +G K + + D KI + ++++Y + L+ A + + +
Sbjct: 187 VSACAELKDLGVGMKLHSHIREMDMKICAVLG--SALVNMYAKCGDLKTARQVFDKLSDK 244
Query: 559 E----DAVILGSFLNVCRLNRNAE 578
+ A+I G N NR+ E
Sbjct: 245 DVYAWSALIFGYVKN----NRSTE 264
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 199/702 (28%), Positives = 315/702 (44%), Gaps = 133/702 (18%)
Query: 34 IYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSM 93
IYS NLL +S +LF+ + +W ++I C SH L PHK L ++ M
Sbjct: 51 IYSHINLLHDSLRLFNTLHFPPALAWKSVIR-CYTSHGL----------PHKSLGSFIGM 99
Query: 94 LCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVK 153
L A G + D S L C L+++ G LH ++++
Sbjct: 100 L-----ASG------------------LYPDHNVFPSVLKACAMLMDLNLGESLHGYIIR 136
Query: 154 TSNDASGFAVSSLIDMYSKCRCYEEACR-------VFEGCTEEVNLISKNAMVAA----- 201
D + ++L++MYSK R +++ R V + TE + +++
Sbjct: 137 VGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRSVRTASVLVGNQGRK 196
Query: 202 -----------CCREGEMEMAL------------------------------------KT 214
CR E E + K
Sbjct: 197 VSDIEAFNYDVSCRSREFEAQVLEIDYKPRSEYREMEACNLGQQIKDISHSMSVDSVRKI 256
Query: 215 FWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRN 274
F PE D VSWNT+I+G +NG E L + MG ++ + T +S L +
Sbjct: 257 FEMMPE-KDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVD 315
Query: 275 VKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVG 334
+ KEIH ++ GL + +V+S ++D+Y KC V +S+
Sbjct: 316 ISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTR------------VVDSY-------- 355
Query: 335 YSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTK---EGVVTD 391
R F LTE++ + W ++ +G V+ LFD +F + +
Sbjct: 356 -----------RVFTLLTERDGISWNSIIAGCVQ----NGLFDEGLKFFRQMLMAKIKPK 400
Query: 392 ALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQ 451
+ ++ ACA LH GK++H YI R G + + S+LVDMY+KCGN+ A IF
Sbjct: 401 SYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFD 460
Query: 452 NFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEM 511
RD+V + MI A HGH AI LFE+M +GI+P+ V F+A+L+A H G V+
Sbjct: 461 RMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDE 520
Query: 512 GEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVC 571
KYFNSMT D+ I+P +HYA + DL GRA +LE+A +F+ +P + + L+ C
Sbjct: 521 AWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPTGSVWATLLSAC 580
Query: 572 RLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAG 631
R+++N ++A + ++L ++ N Y+ LAN+Y+A W E + R +R +
Sbjct: 581 RVHKNVDMAEKVANRILEVDPKNTGAYILLANIYSAARRWKEAAKWRASLRRTGIRKTPA 640
Query: 632 CSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIAG 673
CSW+ V ++++ F GD SHP I + + EL E G
Sbjct: 641 CSWIEVRNKVYAFMAGDESHPCYEKIREAMEVLM-ELMEKEG 681
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 172/606 (28%), Positives = 300/606 (49%), Gaps = 69/606 (11%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
E +VF ++ K L +A+ LF S H+D+V +N+M+ G + G DA++L +
Sbjct: 141 ESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAG-CSLYGLCDDAVQLIM 199
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
+MQ +E I + T+ L + +G G+ LH + V+ S D + L+DMY+K
Sbjct: 200 QMQ--EEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAK 257
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C+C A ++F+ M ++ + VSW+ +I
Sbjct: 258 CQCLLYARKIFD------------------------VMGVR---------NEVSWSAMIG 284
Query: 233 GYVQNGDAEEGLKLFVRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI 291
GYV + +E L+LF +M ++ + T S L AC L ++ +++H +++K G +
Sbjct: 285 GYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXV 344
Query: 292 SNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL 351
+ + + ++ +Y KC G +++A R FD +
Sbjct: 345 LDILLGNTLLSMYAKC-------------------------------GVIDDAIRFFDXM 373
Query: 352 TEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG 411
K+ V ++A+ SG V+ N + + G+ D ++ +L AC+ AAL G
Sbjct: 374 NPKDSVSFSAIVSGCVQNGNAAVALSIF-RMMQLSGIDPDLTTMLGVLPACSHLAALQHG 432
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
H Y++ G D + + L+DMYSKCG +++A +F D+V +N MI Y H
Sbjct: 433 FCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIH 492
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH 531
G +A+ LF ++L G+KPD +TF+ +LS+ H G V G +F++M+ D+ I P +H
Sbjct: 493 GLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEH 552
Query: 532 YACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLE 591
CM+D+ GRA +++A F++++P E D I + L+ CR+++N EL E +K+ L
Sbjct: 553 CICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLG 612
Query: 592 GNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSH 651
+ +V L+N+Y+A G W + IR + + GCSW+ + +H F GD SH
Sbjct: 613 PESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSH 672
Query: 652 PKTNAI 657
+ + I
Sbjct: 673 LQLSQI 678
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 136/571 (23%), Positives = 236/571 (41%), Gaps = 107/571 (18%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
++S +L EA H +K + ++L +Y N + +R+LFDE+P +V WN
Sbjct: 19 IQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWN 78
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
II A + A L+ S H
Sbjct: 79 QIIRAYAWNGPFDGAIDLYHSMLHLG---------------------------------- 104
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
+R +++T L C LL + G ++H+ ++ F ++L+D Y+KC EA
Sbjct: 105 VRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQ 164
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
R+F + ++++ NAM+A C S Y G
Sbjct: 165 RLFSSMSHR-DVVAWNAMIAGC-----------------------------SLY---GLC 191
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
++ ++L ++M E G+ N T L + + K +H + ++ + V +G+
Sbjct: 192 DDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGL 251
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
+D+Y KC+ + YA + + GVRN S S+MI GY M+EA FD + K+ + T
Sbjct: 252 LDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPT 311
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
+ G V L ACA L G+++H YI++
Sbjct: 312 PVTLGSV-------------------------------LRACAKLTDLSRGRKLHCYIIK 340
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
+G +D L +TL+ MY+KCG + A F +D V ++ +++ +G+ A+ +
Sbjct: 341 LGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSI 400
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC--MIDL 538
F M GI PD T + +L A H +++ G F S TD C +ID+
Sbjct: 401 FRMMQLSGIDPDLTTMLGVLPACSHLAALQHG---FCSHGYLIVRGFATDTLICNALIDM 457
Query: 539 YGRANQLEKAIEFMKSIPTEE----DAVILG 565
Y + ++ A E + + +A+I+G
Sbjct: 458 YSKCGKISFAREVFNRMDRHDIVSWNAMIIG 488
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/452 (23%), Positives = 190/452 (42%), Gaps = 72/452 (15%)
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L C++ ++ +++H +K +++A + L +Y C
Sbjct: 15 LEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCN----------------- 57
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
++ +A + F P + WN +I Y NG + + L+ M
Sbjct: 58 ---------------QVVLARRLFDEIPN-PSVILWNQIIRAYAWNGPFDGAIDLYHSML 101
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
GVR N++T+ L AC GL ++ EIHS GL S+ FV + +VD Y KC
Sbjct: 102 HLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKC---- 157
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
G + EA+R F S++ ++VV W A+ +G
Sbjct: 158 ---------------------------GILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGL 190
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
C+ L+ + + +EG+ ++ +V +L AL GK +H Y +R + +
Sbjct: 191 CDDAVQLIMQ-MQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGT 249
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM-LEKGIK 490
L+DMY+KC + YA IF R+ V ++ MI Y ++A+ LF++M L+ +
Sbjct: 250 GLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMD 309
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA--CMIDLYGRANQLEKA 548
P VT ++L A + G K + K+ D ++ +Y + ++ A
Sbjct: 310 PTPVTLGSVLRACAKLTDLSRGRKLHCYII---KLGXVLDILLGNTLLSMYAKCGVIDDA 366
Query: 549 IEFMKSIPTEEDAVILGSFLNVCRLNRNAELA 580
I F + +D+V + ++ C N NA +A
Sbjct: 367 IRFFDXM-NPKDSVSFSAIVSGCVQNGNAAVA 397
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 101/467 (21%), Positives = 178/467 (38%), Gaps = 107/467 (22%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H ++ + L+ +Y+K L +RK+FD M RN SW+ +I + S +
Sbjct: 233 HGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCM 292
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVT--S 130
K+A LFD KD MD VT S
Sbjct: 293 KEALELFDQMILKD-----------------------------------AMDPTPVTLGS 317
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L C KL ++ GR+LH +++K ++L+ MY+KC ++A R F+ +
Sbjct: 318 VLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPK- 376
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
+ +S +A+V+ C VQNG+A L +F M
Sbjct: 377 DSVSFSAIVSGC--------------------------------VQNGNAAVALSIFRMM 404
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
+G+ + T L AC L ++ H +++ G ++ + + ++D+Y KC +
Sbjct: 405 QLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKI 464
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL----TEKNVVVWTAL---- 362
++A + + S ++MI+GY + G EA F L + + + + L
Sbjct: 465 SFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSC 524
Query: 363 -------------------FSGYVKAQNCEALFDLLSE---------FVTKEGVVTDALI 394
FS + ++C + D+L F+ D I
Sbjct: 525 SHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRI 584
Query: 395 LVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
LL AC + + G+E+ I +G + + L ++YS G
Sbjct: 585 WSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFV-LLSNIYSAAG 630
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 6/178 (3%)
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD 457
LL AC +L K+IH + L+ D ++ L +Y C + A +F
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFN 517
++L+N +I YA +G + AI L+ ML G++P+ T+ +L A ++E G + +
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVE-IH 132
Query: 518 SMTADYKISPETDHYAC--MIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRL 573
S + + E+D + C ++D Y + L +A S+ + D V + + C L
Sbjct: 133 SHAKMFGL--ESDVFVCTALVDFYAKCGILVEAQRLFSSM-SHRDVVAWNAMIAGCSL 187
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 173/644 (26%), Positives = 310/644 (48%), Gaps = 77/644 (11%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLV 88
NQL HI+++ LLR +++ + N I+ + ++ +F ++
Sbjct: 30 NQLKHIHAR--LLRLHL-------DQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIF 80
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLH 148
+N+M+ G ++ + ++ DA+ L+ M+ + FT+ L C + L+V G ++H
Sbjct: 81 LWNTMIRGLVSKDCFD-DAIHLYGSMRGGG--FLPNNFTIPFVLKACARKLDVRLGLKIH 137
Query: 149 AFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEM 208
+ +VK D F +SL+ +Y KC +++A +VF+ ++
Sbjct: 138 SLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDK------------------- 178
Query: 209 EMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSA 268
+ VSW +I+GY+ +G E + F ++ E G++ + + L+A
Sbjct: 179 --------------NVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAA 224
Query: 269 CCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSI 328
C L + + I ++ +G+ N FV++ ++D+Y KC
Sbjct: 225 CARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKC--------------------- 263
Query: 329 SSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGV 388
GN+E A F ++ EK++V W+ + GY + DL + + E +
Sbjct: 264 ----------GNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQ-MQSENL 312
Query: 389 VTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEI 448
D +V +L ACA AL G + + R + L + L+DMYSKCG++T A
Sbjct: 313 KPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWE 372
Query: 449 IFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGS 508
IF +D V++N M+ + +GH + LF + + GI+PD TF+ +L H G
Sbjct: 373 IFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGF 432
Query: 509 VEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFL 568
V G ++FN+M + ++P +HY CM+DL GRA L +A + + ++P + +AV+ G+ L
Sbjct: 433 VNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALL 492
Query: 569 NVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNR 628
C+L+++ LA + +KL+ LE N YVQL+N+Y+ W E +IR M+ + +
Sbjct: 493 GGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQK 552
Query: 629 FAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
CSW+ ++ +H F VGD SH + IY+ L EL +
Sbjct: 553 IRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVG 596
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 114/492 (23%), Positives = 199/492 (40%), Gaps = 107/492 (21%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R L+++ L H +KAG L+ +Y K + ++ K+FD++P++NV SW
Sbjct: 126 RKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTA 185
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
II+ I S ++A A K +EM +
Sbjct: 186 IITGYISSGHFREA-----------------------------IGAFKKLLEMG-----L 211
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+ D F++ L C +L + G + ++ + + F +SL+DMY KC
Sbjct: 212 KPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKC-------- 263
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
G E NLI F PE D VSW+T+I GY NG +
Sbjct: 264 ---GNLERANLI---------------------FSAMPE-KDIVSWSTMIQGYAFNGLPQ 298
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
+ L LF +M ++ + +T LSAC L + S + +N +SNP + + ++
Sbjct: 299 QALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALI 358
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D+Y KC G++ +A F ++ K+ VVW A
Sbjct: 359 DMYSKC-------------------------------GSVTQAWEIFTAMKRKDRVVWNA 387
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+ G + +A+F L S V K G+ D + LL C ++ G++ + R+
Sbjct: 388 MMVGLSMNGHAKAVFSLFS-LVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRV 446
Query: 422 -GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMI-ACYAHHGHEEKAI 478
+ + +VD+ + G + A + N ++ + V++ ++ C H K
Sbjct: 447 FSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLH-----KDT 501
Query: 479 LLFEEMLEKGIK 490
L E++L+K I+
Sbjct: 502 HLAEQVLKKLIE 513
>gi|449468660|ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 697
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 162/491 (32%), Positives = 265/491 (53%), Gaps = 35/491 (7%)
Query: 216 WRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM-GENGVRWNEHTFASALSACCGLRN 274
+ Q E + +N +I G+V G L+ +V M E+ V +TF+S + AC +
Sbjct: 191 FTQMENPNVFVYNAMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCA 250
Query: 275 VKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVG 334
V+ + +H + K G S+ FV + +VD Y K E ++ A + R++F+ ++M+
Sbjct: 251 VELGQMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMVSA 310
Query: 335 YSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKE-------- 386
+ G+M+ AR+ F+ + E+N W + GY + N E+ L ++ TK+
Sbjct: 311 LARVGDMDSARKLFEEMPERNTATWNTMIDGYARLGNVESAELLFNQMPTKDIISWTTMI 370
Query: 387 ----------------------GVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
G++ D + + + ACA AL GKEIH Y++ G+
Sbjct: 371 TCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLN 430
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
+D + S LVDMY+KCG++ + +IF +++L +N +I A HG+ EKA+ +F M
Sbjct: 431 LDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIM 490
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
+ I P+ VTF++ILSA H G V+ G F SMT DY I P+ HY CM+D+ ++
Sbjct: 491 EREKIMPNGVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGY 550
Query: 545 LEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANV 604
L +A+E +KS+ E +++I G+ LN C+L+ N E+A +A E+L+ LE N Y L ++
Sbjct: 551 LNEALELIKSMEFEPNSIIWGALLNGCKLHGNCEIAEDAVEQLMILEPMNSGHYNLLVSM 610
Query: 605 YAAEGNWAEMGRIRKQMRGMKG--NRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLA 662
YA E +W E+ IR M+ KG ++ G SW+ +E IH F+ SHP ++ IY VL
Sbjct: 611 YAEEKDWMEVAHIRSMMKE-KGVEKKYPGSSWIELEGTIHQFSASADSHPDSDKIYFVLT 669
Query: 663 IFTGELYEIAG 673
G+L ++AG
Sbjct: 670 ELDGQL-KLAG 679
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 109/464 (23%), Positives = 201/464 (43%), Gaps = 67/464 (14%)
Query: 54 RNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIE 113
++ F + ISA + + F + ++ YN+M+ G++ GY AL+ ++
Sbjct: 166 QDCFLVHQFISASFALNSVHYPVFAFTQMENPNVFVYNAMIKGFVYC-GYPFRALQCYVH 224
Query: 114 MQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKC 173
M + ++ +T +S + C + V G+ +H + K ++ F ++L+D YSK
Sbjct: 225 MLE-ESNVLPTSYTFSSLVKACTFMCAVELGQMVHCHIWKKGFESHLFVQTALVDFYSKL 283
Query: 174 RCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN----------- 222
EA +VF+ E + + AMV+A R G+M+ A K F PE N
Sbjct: 284 EILSEARKVFDEMCER-DAFAWTAMVSALARVGDMDSARKLFEEMPERNTATWNTMIDGY 342
Query: 223 -------------------DAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
D +SW T+I+ Y QN ++ L ++ M NG+ +E T +
Sbjct: 343 ARLGNVESAELLFNQMPTKDIISWTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEVTMS 402
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
+ SAC + ++ KEIH +V+ GL + ++ S +VD+Y KC
Sbjct: 403 TVASACAHIGALELGKEIHHYVMSQGLNLDVYIGSALVDMYAKC---------------- 446
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV 383
S +S +I F LT+KN+ W A+ G E + + +
Sbjct: 447 GSLDLSLLI---------------FFKLTDKNLYCWNAVIEGLAVHGYAEKALRMFA-IM 490
Query: 384 TKEGVVTDALILVILLGACALQAALHPGKEIHAYILR-MGVQMDKKLISTLVDMYSKCGN 442
+E ++ + + + +L AC + G+ + R ++ D + +VDM SK G
Sbjct: 491 EREKIMPNGVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGY 550
Query: 443 MTYA-EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
+ A E+I E + +++ ++ HG+ E A E+++
Sbjct: 551 LNEALELIKSMEFEPNSIIWGALLNGCKLHGNCEIAEDAVEQLM 594
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 170/418 (40%), Gaps = 100/418 (23%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
M ++ L + + CH+ K G L+ YSK +L E+RK+FDEM ER+ F+W
Sbjct: 248 MCAVELGQMVHCHIW--KKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWT 305
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYI---NAEGYE------------- 104
++SA + D+ AR LF+ P ++ T+N+M+ GY N E E
Sbjct: 306 AMVSALARVGDMDSARKLFEEMPERNTATWNTMIDGYARLGNVESAELLFNQMPTKDIIS 365
Query: 105 --------------ADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAF 150
DAL ++ EM+ I DE T+++ + C + + G+++H +
Sbjct: 366 WTTMITCYSQNKQYQDALAIYSEMRL--NGIIPDEVTMSTVASACAHIGALELGKEIHHY 423
Query: 151 MVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEM 210
++ + + S+L+DMY+KC G +++
Sbjct: 424 VMSQGLNLDVYIGSALVDMYAKC--------------------------------GSLDL 451
Query: 211 ALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACC 270
+L F++ + N WN +I G +G AE+ L++F M + N TF S LSAC
Sbjct: 452 SLLIFFKLTDKN-LYCWNAVIEGLAVHGYAEKALRMFAIMEREKIMPNGVTFISILSAC- 509
Query: 271 GLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFS-IS 329
+G+VD E + SM +R
Sbjct: 510 -------------------------THAGLVD-----EGRSRFLSMTRDYDIRPDIRHYG 539
Query: 330 SMIVGYSLQGNMEEARRHFDSLT-EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKE 386
M+ S G + EA S+ E N ++W AL +G NCE D + + + E
Sbjct: 540 CMVDMLSKSGYLNEALELIKSMEFEPNSIIWGALLNGCKLHGNCEIAEDAVEQLMILE 597
>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 833
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 199/630 (31%), Positives = 312/630 (49%), Gaps = 69/630 (10%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHK---DLVTYNSMLCGYINAEGYEADALK 109
E NVF N +IS K + AR +FD ++ D VT+NS++ Y + A+
Sbjct: 158 ESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHCFVPNV-AVS 216
Query: 110 LFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGF-GRQLHAFMVKTSNDASGFAVSSLID 168
LF EM + I D V + L +C L +G GRQ+H F V++ F ++L+D
Sbjct: 217 LFREM-TVGYGILPDTVGVVNILPVC-GYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVD 274
Query: 169 MYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPEL---NDAV 225
MY+KC E+A +VFE + ++++ NAMV + G E AL F + E +D V
Sbjct: 275 MYAKCGKMEDANKVFERMRFK-DVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVV 333
Query: 226 SWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWV 285
+W+++ISGY Q G E + +F +M R N T S LSAC + + KE H +
Sbjct: 334 TWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYS 393
Query: 286 LK-------NGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQ 338
+K N + V + ++D+Y KC+++
Sbjct: 394 VKFILKGEHNDDTDDLAVINALIDMYAKCKSL---------------------------- 425
Query: 339 GNMEEARRHFDSLTEK--NVVVWTALFSGYVKAQNCEALFDLLSE-FVTKEGVVTDALIL 395
E AR FD + K +VV WT + GY + + L SE F +V + +
Sbjct: 426 ---EVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTI 482
Query: 396 VILLGACALQAALHPGKEIHAYILRMGVQMDKKLI---STLVDMYSKCGNMTYAEIIFQN 452
+L ACA AAL GK+IHAY+LR ++D ++ + L+DMYSK G++ A+++F +
Sbjct: 483 SCVLMACARLAALKFGKQIHAYVLRRS-RIDSDVLFVANCLIDMYSKSGDVDTAQVVFDS 541
Query: 453 FIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMG 512
+R+ V + ++ Y HG E A +F+EM ++ + D +TF+ +L A H G
Sbjct: 542 MSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSG----- 596
Query: 513 EKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCR 572
D+ + P +HYACM+DL GRA +L +A+ + +P E V+ + L+ CR
Sbjct: 597 --------MDFGVDPGVEHYACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLSACR 648
Query: 573 LNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGC 632
++ N ELA A +KLL L+ +N Y L+N+YA W ++ RI M+ + G
Sbjct: 649 IHSNEELAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIGYLMKRTGIKKIPGW 708
Query: 633 SWVYVEHEIHIFTVGDVSHPKTNAIYSVLA 662
SWV + F VGD +H ++ IY LA
Sbjct: 709 SWVKGRKGMETFYVGDRTHLQSQKIYETLA 738
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 154/616 (25%), Positives = 271/616 (43%), Gaps = 97/616 (15%)
Query: 5 NLKEALICHVQAIKAGLTLTTIT-TNQLIHIYSKHNLLRESRKLFDE--MPERN-VFSWN 60
L +A + H Q I G L + T LI+ Y N + + L ++ P + V+ WN
Sbjct: 36 TLTQAKLLHQQYIINGHLLNSYTNVTNLIYTYISSNSITNAILLLEKNVTPSHSSVYWWN 95
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
+I +L +SP+ AL+LF M++ H
Sbjct: 96 QLIR-----------HALHFNSPNT---------------------ALRLFRRMKTL--H 121
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
D +T C ++ N G +H +++ +++ F +++I MY KC+ A
Sbjct: 122 WTPDHYTFPFVFKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHAR 181
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+VF+ C G + D+V+WN+++S Y
Sbjct: 182 KVFD----------------ELCYRG--------------ICDSVTWNSIVSVYSHCFVP 211
Query: 241 EEGLKLFVRMGEN-GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
+ LF M G+ + + L C L C +++H + +++GL+ + FV +
Sbjct: 212 NVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNA 271
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK----N 355
+VD+Y KC M A + ++ + ++M+ GYS G E+A F + E+ +
Sbjct: 272 LVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESD 331
Query: 356 VVVWTALFSGYV-KAQNCEAL--FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
VV W+++ SGY + CEA+ F + + VVT L+ LL ACA AL GK
Sbjct: 332 VVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVT----LMSLLSACASVGALLHGK 387
Query: 413 EIHAYILRMGVQM-------DKKLISTLVDMYSKCGNMTYAEIIFQNFI--ERDLVLYNV 463
E H Y ++ ++ D +I+ L+DMY+KC ++ A +F +RD+V + V
Sbjct: 388 ETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTV 447
Query: 464 MIACYAHHGHEEKAILLFEEM--LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTA 521
MI YA HG A+ LF EM ++ I P+ T +L A +++ G++ +
Sbjct: 448 MIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLR 507
Query: 522 DYKISPETDHYA-CMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELA 580
+I + A C+ID+Y ++ ++ A S+ ++ +AV S L ++ +E A
Sbjct: 508 RSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSM-SKRNAVSWTSLLTGYGMHGRSEDA 566
Query: 581 ----GEAEEKLLRLEG 592
E ++ L L+G
Sbjct: 567 FRVFDEMRKEALVLDG 582
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 119/491 (24%), Positives = 224/491 (45%), Gaps = 96/491 (19%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +++GL N L+ +Y+K + ++ K+F+ M ++V +WN +++ ++
Sbjct: 254 HGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRF 313
Query: 73 KQARSLF----DSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
+ A SLF + D+VT++S++ GY G+ +A+ +F +M R + T+
Sbjct: 314 EDALSLFGKMREEKIESDVVTWSSVISGYAQ-RGFGCEAMDVFRQMCGC--RCRPNVVTL 370
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVK------TSNDASGFAV-SSLIDMYSKCRCYEEACR 181
S L+ C + + G++ H + VK ++D AV ++LIDMY+KC+ E A
Sbjct: 371 MSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARA 430
Query: 182 VF-EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+F E C ++ ++++ M I GY Q+GDA
Sbjct: 431 MFDEICPKDRDVVTWTVM--------------------------------IGGYAQHGDA 458
Query: 241 EEGLKLFVRMG--ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP--FV 296
L+LF M +N + N+ T + L AC L +K K+IH++VL+ I + FV
Sbjct: 459 NHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFV 518
Query: 297 SSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNV 356
++ ++D+Y K +++ A+ + RN+ S +S++ GY + G E+A R FD +
Sbjct: 519 ANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEM----- 573
Query: 357 VVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHA 416
KE +V D + +++L AC+ H G +
Sbjct: 574 ---------------------------RKEALVLDGITFLVVLYACS-----HSGMD--- 598
Query: 417 YILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEE 475
GV + + +VD+ + G + A + + IE V++ +++ H +EE
Sbjct: 599 ----FGVDPGVEHYACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLSACRIHSNEE 654
Query: 476 KAILLFEEMLE 486
A +++LE
Sbjct: 655 LAEFAAKKLLE 665
>gi|449456490|ref|XP_004145982.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Cucumis sativus]
Length = 710
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 198/695 (28%), Positives = 336/695 (48%), Gaps = 75/695 (10%)
Query: 37 KHNLLRESRKLFDEMPE------RNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTY 90
KHN + +LF + E N+ S N IS ++ L A++LF+ P + +V++
Sbjct: 12 KHNRWKACLELFSTLCEGLHTENSNIISTNIYISRHVRDGHLDLAQTLFNEMPVRSVVSW 71
Query: 91 NSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAF 150
N M+ GY + G ++AL L EM +++++E T +S L++C G+Q H
Sbjct: 72 NIMISGY-SKFGKYSEALNLASEMHC--NNVKLNETTFSSLLSICAHSGCSSEGKQFHCL 128
Query: 151 MVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEM 210
++K+ S+L+ Y+ A +VF+ ++ +L+ + ++ + M+
Sbjct: 129 VLKSGLQIFERVGSALVYFYANINDISGAKQVFDELHDKNDLL-WDLLLVGYVKCNLMDD 187
Query: 211 ALKTFWRQPELNDAVSWNTLISGYVQN-GDAEEGLKLFVRMGENG-VRWNEHTFASALSA 268
AL F + P D V+W T+IS Y ++ + + GL+LF M NG V NE TF S + A
Sbjct: 188 ALDLFMKIPT-RDVVAWTTMISAYARSEHNCKRGLELFCSMRMNGEVEPNEFTFDSVVRA 246
Query: 269 CCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESML----------- 317
C +R + K +H + K G + V S ++ YC+CE ++ A+++
Sbjct: 247 CGRMRYLSWGKVVHGILTKYGFHFDHSVCSALILFYCQCEAIDNAKAVYDSMERPCLKAS 306
Query: 318 --LLKGV------------------RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVV 357
LL+G+ +N S + M+ GY+ G +E ++R F+ +T K
Sbjct: 307 NSLLEGLIFAGRINDAEEIFCKLREKNPVSYNLMLKGYATSGRIEGSKRLFERMTHKTTS 366
Query: 358 VWTALFSGYVKAQNCEALFDLLSEFVTKEGVVT---------------DALILVI----- 397
+ S Y + + F L ++ VT AL L I
Sbjct: 367 SLNTMISVYSRNGEIDKAFKLFESVKSEGDPVTWNSMISGCIQNHQHEGALKLYITMCRT 426
Query: 398 -----------LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYA 446
L AC + G+ +H + +R + + ++L+DMY+KCG++ A
Sbjct: 427 SVERSRSTFSALFQACTCLEYIQLGQALHVHAIREAFDSNVYVGTSLIDMYAKCGSIYDA 486
Query: 447 EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHC 506
+ F + ++ + +I Y HHG +A +F+EML+ + P+ T + ILSA
Sbjct: 487 QTSFASVCFPNVAAFTALINGYVHHGLGIEAFSVFDEMLKHKVPPNGATLLGILSACSCA 546
Query: 507 GSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGS 566
G V+ G F+SM Y + P +HYAC++DL GR+ +L +A F++ +P E D VI G+
Sbjct: 547 GMVKEGMTVFHSMEKCYGVIPTLEHYACVVDLLGRSGRLYEAEAFIRCMPIEADRVIWGA 606
Query: 567 FLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKG 626
LN C + EL +K+L L+ + Y+ L+N+YA G W E +R+Q+ +K
Sbjct: 607 LLNACWFWMDLELGESVAKKVLSLDPKAISAYIILSNIYAKLGKWVEKINVRRQLMSLKV 666
Query: 627 NRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+ GCSW+ V ++ +F+ GD SHP NAIYS L
Sbjct: 667 KKIRGCSWIDVNNKTCVFSAGDRSHPNCNAIYSTL 701
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 125/555 (22%), Positives = 227/555 (40%), Gaps = 104/555 (18%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K+GL + + L++ Y+ N + ++++FDE+ ++N W+ ++ +K + +
Sbjct: 126 HCLVLKSGLQIFERVGSALVYFYANINDISGAKQVFDELHDKNDLLWDLLLVGYVKCNLM 185
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
A LF P +D+V + +M+ Y +E L+LF M+ E + +EFT S +
Sbjct: 186 DDALDLFMKIPTRDVVAWTTMISAYARSEHNCKRGLELFCSMRMNGE-VEPNEFTFDSVV 244
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG----CTE 188
C ++ + +G+ +H + K S+LI Y +C + A V++ C +
Sbjct: 245 RACGRMRYLSWGKVVHGILTKYGFHFDHSVCSALILFYCQCEAIDNAKAVYDSMERPCLK 304
Query: 189 --------------------------EVNLISKNAMVAACCREG---------------- 206
E N +S N M+ G
Sbjct: 305 ASNSLLEGLIFAGRINDAEEIFCKLREKNPVSYNLMLKGYATSGRIEGSKRLFERMTHKT 364
Query: 207 ---------------EMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
E++ A K F D V+WN++ISG +QN E LKL++ M
Sbjct: 365 TSSLNTMISVYSRNGEIDKAFKLFESVKSEGDPVTWNSMISGCIQNHQHEGALKLYITMC 424
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
V + TF++ AC L ++ + +H ++ SN +V + ++D+Y KC
Sbjct: 425 RTSVERSRSTFSALFQACTCLEYIQLGQALHVHAIREAFDSNVYVGTSLIDMYAKC---- 480
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
G++ +A+ F S+ NV +TAL +GYV
Sbjct: 481 ---------------------------GSIYDAQTSFASVCFPNVAAFTALINGYVHHGL 513
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI-HAYILRMGVQMDKKLI 430
F + E + K V + L+ +L AC+ + G + H+ GV +
Sbjct: 514 GIEAFSVFDEML-KHKVPPNGATLLGILSACSCAGMVKEGMTVFHSMEKCYGVIPTLEHY 572
Query: 431 STLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMI-ACYAHHGHEEKAILLFEEMLEK- 487
+ +VD+ + G + AE + IE D V++ ++ AC+ E L E + +K
Sbjct: 573 ACVVDLLGRSGRLYEAEAFIRCMPIEADRVIWGALLNACWFWMDLE-----LGESVAKKV 627
Query: 488 -GIKPDAVTFVAILS 501
+ P A++ ILS
Sbjct: 628 LSLDPKAISAYIILS 642
>gi|449517761|ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 600
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 161/491 (32%), Positives = 265/491 (53%), Gaps = 35/491 (7%)
Query: 216 WRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM-GENGVRWNEHTFASALSACCGLRN 274
+ Q E + +N +I G+V G L+ +V M E+ V +TF+S + AC +
Sbjct: 94 FTQMENPNVFVYNAMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCA 153
Query: 275 VKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVG 334
V+ + +H + K G S+ FV + +VD Y K E ++ A + R++F+ ++M+
Sbjct: 154 VELGQMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMLSA 213
Query: 335 YSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKE-------- 386
+ G+M+ AR+ F+ + E+N W + GY + N E+ L ++ TK+
Sbjct: 214 LARVGDMDSARKLFEEMPERNTATWNTMIDGYTRLGNVESAELLFNQMPTKDIISWTTMI 273
Query: 387 ----------------------GVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
G++ D + + + ACA AL GKEIH Y++ G+
Sbjct: 274 TCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLN 333
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
+D + S LVDMY+KCG++ + +IF +++L +N +I A HG+ EKA+ +F M
Sbjct: 334 LDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIM 393
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
+ I P+ VTF++ILSA H G V+ G F SMT DY I P+ HY CM+D+ ++
Sbjct: 394 EREKIMPNGVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGY 453
Query: 545 LEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANV 604
L +A+E +KS+ E +++I G+ LN C+L+ N E+A +A E+L+ LE N Y L ++
Sbjct: 454 LNEALELIKSMEFEPNSIIWGALLNGCKLHGNCEIAEDAVEQLMILEPMNSGHYNLLVSM 513
Query: 605 YAAEGNWAEMGRIRKQMRGMKG--NRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLA 662
YA E +W E+ IR M+ KG ++ G SW+ +E IH F+ SHP ++ IY +L
Sbjct: 514 YAEEKDWMEVAHIRSMMKE-KGVEKKYPGSSWIELEGTIHQFSASADSHPDSDKIYFILT 572
Query: 663 IFTGELYEIAG 673
G+L ++AG
Sbjct: 573 ELDGQL-KLAG 582
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 108/464 (23%), Positives = 201/464 (43%), Gaps = 67/464 (14%)
Query: 54 RNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIE 113
++ F + ISA + + F + ++ YN+M+ G++ GY AL+ ++
Sbjct: 69 QDCFLVHQFISASFALNSVHYPVFAFTQMENPNVFVYNAMIKGFVYC-GYPFRALQCYVH 127
Query: 114 MQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKC 173
M + ++ +T +S + C + V G+ +H + K ++ F ++L+D YSK
Sbjct: 128 MLE-ESNVLPTSYTFSSLVKACTFMCAVELGQMVHCHIWKKGFESHLFVQTALVDFYSKL 186
Query: 174 RCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN----------- 222
EA +VF+ E + + AM++A R G+M+ A K F PE N
Sbjct: 187 EILSEARKVFDEMCER-DAFAWTAMLSALARVGDMDSARKLFEEMPERNTATWNTMIDGY 245
Query: 223 -------------------DAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
D +SW T+I+ Y QN ++ L ++ M NG+ +E T +
Sbjct: 246 TRLGNVESAELLFNQMPTKDIISWTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEVTMS 305
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
+ SAC + ++ KEIH +V+ GL + ++ S +VD+Y KC
Sbjct: 306 TVASACAHIGALELGKEIHHYVMSQGLNLDVYIGSALVDMYAKC---------------- 349
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV 383
S +S +I F LT+KN+ W A+ G E + + +
Sbjct: 350 GSLDLSLLI---------------FFKLTDKNLYCWNAVIEGLAVHGYAEKALRMFA-IM 393
Query: 384 TKEGVVTDALILVILLGACALQAALHPGKEIHAYILR-MGVQMDKKLISTLVDMYSKCGN 442
+E ++ + + + +L AC + G+ + R ++ D + +VDM SK G
Sbjct: 394 EREKIMPNGVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGY 453
Query: 443 MTYA-EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
+ A E+I E + +++ ++ HG+ E A E+++
Sbjct: 454 LNEALELIKSMEFEPNSIIWGALLNGCKLHGNCEIAEDAVEQLM 497
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 170/418 (40%), Gaps = 100/418 (23%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
M ++ L + + CH+ K G L+ YSK +L E+RK+FDEM ER+ F+W
Sbjct: 151 MCAVELGQMVHCHIW--KKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWT 208
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYI---NAEGYE------------- 104
++SA + D+ AR LF+ P ++ T+N+M+ GY N E E
Sbjct: 209 AMLSALARVGDMDSARKLFEEMPERNTATWNTMIDGYTRLGNVESAELLFNQMPTKDIIS 268
Query: 105 --------------ADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAF 150
DAL ++ EM+ I DE T+++ + C + + G+++H +
Sbjct: 269 WTTMITCYSQNKQYQDALAIYSEMRL--NGIIPDEVTMSTVASACAHIGALELGKEIHHY 326
Query: 151 MVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEM 210
++ + + S+L+DMY+KC G +++
Sbjct: 327 VMSQGLNLDVYIGSALVDMYAKC--------------------------------GSLDL 354
Query: 211 ALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACC 270
+L F++ + N WN +I G +G AE+ L++F M + N TF S LSAC
Sbjct: 355 SLLIFFKLTDKN-LYCWNAVIEGLAVHGYAEKALRMFAIMEREKIMPNGVTFISILSAC- 412
Query: 271 GLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFS-IS 329
+G+VD E + SM +R
Sbjct: 413 -------------------------THAGLVD-----EGRSRFLSMTRDYDIRPDIRHYG 442
Query: 330 SMIVGYSLQGNMEEARRHFDSLT-EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKE 386
M+ S G + EA S+ E N ++W AL +G NCE D + + + E
Sbjct: 443 CMVDMLSKSGYLNEALELIKSMEFEPNSIIWGALLNGCKLHGNCEIAEDAVEQLMILE 500
>gi|356495396|ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 516
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 151/438 (34%), Positives = 241/438 (55%), Gaps = 1/438 (0%)
Query: 223 DAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIH 282
+ V WNT++ Y + D E L L+ +M N V N +TF L AC L + ++IH
Sbjct: 74 NTVIWNTMLRAYSNSNDPEAALLLYHQMLHNSVPHNSYTFPFLLKACSALSAFEETQQIH 133
Query: 283 SWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNME 342
+ ++K G + ++ ++ VY N+ A + R+ S + MI GY GN++
Sbjct: 134 AHIIKRGFGLEVYATNSLLRVYAISGNIQSAHVLFNQLPTRDIVSWNIMIDGYIKFGNLD 193
Query: 343 EARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGAC 402
A + F ++ EKNV+ WT + G+V+ + LL + + G+ D++ L L AC
Sbjct: 194 MAYKIFQAMPEKNVISWTTMIVGFVRIGMHKEALSLLQQMLVA-GIKPDSITLSCSLSAC 252
Query: 403 ALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYN 462
A AL GK IH YI + +++D L L DMY KCG M A ++F ++ + +
Sbjct: 253 AGLGALEQGKWIHTYIEKNEIKIDPVLGCVLTDMYVKCGEMEKALLVFSKLEKKCVCAWT 312
Query: 463 VMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTAD 522
+I A HG +A+ F +M + GI P+++TF AIL+A H G E G+ F SM++
Sbjct: 313 AIIGGLAIHGKGREALDWFTQMQKAGINPNSITFTAILTACSHAGLTEEGKSLFESMSSV 372
Query: 523 YKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGE 582
Y I P +HY CM+DL GRA L++A EF++S+P + +A I G+ LN C+L+++ EL E
Sbjct: 373 YNIKPSMEHYGCMVDLMGRAGLLKEAREFIESMPVKPNAAIWGALLNACQLHKHFELGKE 432
Query: 583 AEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIH 642
+ L+ L+ ++ RY+ LA++YAA G W ++ R+R Q++ GCS + + +H
Sbjct: 433 IGKILIELDPDHSGRYIHLASIYAAAGEWNQVVRVRSQIKHRGLLNHPGCSSITLNGVVH 492
Query: 643 IFTVGDVSHPKTNAIYSV 660
F GD SHP IY +
Sbjct: 493 EFFAGDGSHPHIQEIYGM 510
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 131/560 (23%), Positives = 228/560 (40%), Gaps = 113/560 (20%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNL--LRESRKLFDEMPERNVFSW 59
R N+KE + H Q +K G +T + L+ Y++ L L +R +FD + N W
Sbjct: 19 RCSNMKELMQIHGQLLKKGTIRNQLTVSTLLVSYARIELVNLAYTRVVFDSISSPNTVIW 78
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
NT++ A S+D P L+ Y+ ML
Sbjct: 79 NTMLRAYSNSND-----------PEAALLLYHQML-----------------------HN 104
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
+ + +T L C L +Q+HA ++K +A +SL+ +Y+ + A
Sbjct: 105 SVPHNSYTFPFLLKACSALSAFEETQQIHAHIIKRGFGLEVYATNSLLRVYAISGNIQSA 164
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
+F +++S N M+ + G ++MA K F PE N +SW T+I G+V+ G
Sbjct: 165 HVLFNQLPTR-DIVSWNIMIDGYIKFGNLDMAYKIFQAMPEKN-VISWTTMIVGFVRIGM 222
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
+E L L +M G++ + T + +LSAC GL ++ K IH+++ KN + +P +
Sbjct: 223 HKEALSLLQQMLVAGIKPDSITLSCSLSACAGLGALEQGKWIHTYIEKNEIKIDPVLGCV 282
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
+ D+Y KC G ME+A F L +K V W
Sbjct: 283 LTDMYVKC-------------------------------GEMEKALLVFSKLEKKCVCAW 311
Query: 360 TALFSGY-VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
TA+ G + + EAL D ++ + K G+ +++ +L AC+ HA +
Sbjct: 312 TAIIGGLAIHGKGREAL-DWFTQ-MQKAGINPNSITFTAILTACS-----------HAGL 358
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
G K L ++ +Y+ I+ + Y M+ G ++A
Sbjct: 359 TEEG----KSLFESMSSVYN---------------IKPSMEHYGCMVDLMGRAGLLKEAR 399
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH---YACM 535
E M +KP+A + A+L+A + E+G++ I + DH Y +
Sbjct: 400 EFIESM---PVKPNAAIWGALLNACQLHKHFELGKE-----IGKILIELDPDHSGRYIHL 451
Query: 536 IDLYGRANQLEKAIEFMKSI 555
+Y A + + + I
Sbjct: 452 ASIYAAAGEWNQVVRVRSQI 471
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 32/176 (18%)
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCG--NMTYAEIIFQNFIERDLVLYNVMIACYAH 470
+IH +L+ G ++ +STL+ Y++ N+ Y ++F + + V++N M+ Y++
Sbjct: 28 QIHGQLLKKGTIRNQLTVSTLLVSYARIELVNLAYTRVVFDSISSPNTVIWNTMLRAYSN 87
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFV------AILSAFR-----HCGSVEMG---EKY- 515
E A+LL+ +ML + ++ TF + LSAF H ++ G E Y
Sbjct: 88 SNDPEAALLLYHQMLHNSVPHNSYTFPFLLKACSALSAFEETQQIHAHIIKRGFGLEVYA 147
Query: 516 FNSMTADYKIS-------------PETD--HYACMIDLYGRANQLEKAIEFMKSIP 556
NS+ Y IS P D + MID Y + L+ A + +++P
Sbjct: 148 TNSLLRVYAISGNIQSAHVLFNQLPTRDIVSWNIMIDGYIKFGNLDMAYKIFQAMP 203
>gi|357507465|ref|XP_003624021.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499036|gb|AES80239.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 632
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 168/522 (32%), Positives = 275/522 (52%), Gaps = 21/522 (4%)
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
D + L + K + F R+L M D + + +I Y KC EEA +F
Sbjct: 118 DHYVRNGILGIYAKYGPIEFARKLFDEM----PDRTVADWNVMISGYWKCGNEEEASTLF 173
Query: 184 EGCTEE---VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
++ N+I+ M+ ++G ++ A F + PE VSWN ++SGY Q G
Sbjct: 174 HVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPE-RSVVSWNAMLSGYAQGGAP 232
Query: 241 EEGLKLFVRMGENG-VRWNEHTFASALSACCGLRNVKCAKE--IHSWVLKNGLISNPFVS 297
EE ++LF M G V+ +E T+A+ +S+C L + C E + K G N FV
Sbjct: 233 EETIRLFNDMLSPGNVQPDETTWATVISSCSSLGD-PCLSESIVRKLDDKVGFRPNYFVK 291
Query: 298 SGIVDVYCKCENMNYAESMLLLKGV---RNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
+ ++D++ KC N+ A + GV R+S ++MI Y+ G++ A+ FD + ++
Sbjct: 292 TALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQR 351
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKE-GVVTDALILVILLGACALQAALHPGKE 413
+ V W ++ +GY + L E ++ E D + +V + AC L G
Sbjct: 352 DTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNW 411
Query: 414 IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH 473
+ + +Q+ + ++L++MYS+CG+M A +IFQ RDLV YN +I+ +A HGH
Sbjct: 412 AVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGH 471
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA 533
++I L +M E GI+PD +T++AIL+A H G ++ G++ F S+ P+ DHYA
Sbjct: 472 GMESIELLSKMKEDGIEPDRITYIAILTACSHAGLLDEGQRLFESIKF-----PDVDHYA 526
Query: 534 CMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGN 593
CMID+ GRA +LE+A++ ++S+P E A I GS LN +++ EL A KL ++E +
Sbjct: 527 CMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAKLFKVEPH 586
Query: 594 NKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWV 635
N Y L+N+YA+ G W E ++R MR + G SW+
Sbjct: 587 NSGNYALLSNIYASAGRWKEGDKVRDTMRKQGVKKTTGLSWL 628
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 148/595 (24%), Positives = 267/595 (44%), Gaps = 130/595 (21%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPER------------- 54
E+++ +K+G N ++ IY+K+ + +RKLFDEMP+R
Sbjct: 102 ESMLFLAHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYW 161
Query: 55 ----------------------NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNS 92
NV +W T+I+ K +LK AR FD P + +V++N+
Sbjct: 162 KCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNA 221
Query: 93 MLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMV 152
ML GY G + ++LF +M S +++ DE T + ++ C L + + V
Sbjct: 222 MLSGYAQG-GAPEETIRLFNDMLSPG-NVQPDETTWATVISSCSSLGDPCLSESI----V 275
Query: 153 KTSNDASG-----FAVSSLIDMYSKCRCYEEACRVFE--GCTEEVNLISKNAMVAACCRE 205
+ +D G F ++L+DM++KC E A ++FE G + + + NAM++A R
Sbjct: 276 RKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARV 335
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM--GENGVRWNEHTFA 263
G++ A F + P+ D VSWN++I+GY QNG++ + +KLF M E+ + +E T
Sbjct: 336 GDLPSAKHLFDKMPQ-RDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMV 394
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
S SAC L + N+A S+L + ++
Sbjct: 395 SVFSACGHLGELGLG--------------------------------NWAVSILKVNHIQ 422
Query: 324 NSFSI-SSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF 382
S S+ +S+I YS G+M++A F + +++V + L SG+ + + +LLS+
Sbjct: 423 ISISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSK- 481
Query: 383 VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGN 442
+ ++G+ D + + +L AC+ HA +L G
Sbjct: 482 MKEDGIEPDRITYIAILTACS-----------HAGLLDEG-------------------- 510
Query: 443 MTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
+ +F++ D+ Y MI G E+A+ L + M ++P A + ++L+A
Sbjct: 511 ----QRLFESIKFPDVDHYACMIDMLGRAGRLEEAMKLIQSM---PMEPHAGIYGSLLNA 563
Query: 503 FRHCGSVEMGEKYFNSMTADYKISPE-TDHYACMIDLY---GRANQLEKAIEFMK 553
VE+GE + +K+ P + +YA + ++Y GR + +K + M+
Sbjct: 564 TSIHKQVELGELAAAKL---FKVEPHNSGNYALLSNIYASAGRWKEGDKVRDTMR 615
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 149/347 (42%), Gaps = 73/347 (21%)
Query: 285 VLKNGLISNPFVSSGIVDVYC-------------------------------KCENMNYA 313
VLK+G + +V +GI+ +Y KC N A
Sbjct: 110 VLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEA 169
Query: 314 ESMLLLKG----VRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
++ + G RN + ++MI G++ +GN++ AR +FD + E++VV W A+ SGY +
Sbjct: 170 STLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQG 229
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGAC-ALQAALHPGKEIHAYILRMGVQMDKK 428
E L ++ ++ V D ++ +C +L + ++G + +
Sbjct: 230 GAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYF 289
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNF----------------------------------I 454
+ + L+DM++KCGN+ A IF+
Sbjct: 290 VKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMP 349
Query: 455 ERDLVLYNVMIACYAHHGHEEKAILLFEEML--EKGIKPDAVTFVAILSAFRHCGSVEMG 512
+RD V +N MIA Y +G KAI LFEEM+ E KPD VT V++ SA H G + +G
Sbjct: 350 QRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLG 409
Query: 513 EKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE 559
+ + ++ I Y +I++Y R ++ A+ + + T +
Sbjct: 410 NWAVSILKVNH-IQISISVYNSLINMYSRCGSMQDAVLIFQEMATRD 455
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/281 (19%), Positives = 122/281 (43%), Gaps = 17/281 (6%)
Query: 348 FDSLTEKNVVVWTALFSGYVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQA 406
F + T +V V+T + Y + + + L + + +A +++ + ++
Sbjct: 44 FHAATHPDVRVFTFMLKYYSQIGVHSQVFVSLFKHMLQHCDIKPNASFYSVMMKSAGSES 103
Query: 407 ALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIA 466
L A++L+ G D + + ++ +Y+K G + +A +F +R + +NVMI+
Sbjct: 104 ML-----FLAHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMIS 158
Query: 467 CYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKIS 526
Y G+EE+A LF M ++ I + +T+ +++ G+++ YF+ M +S
Sbjct: 159 GYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVS 218
Query: 527 PETDHYACMIDLYGRANQLEKAIEFMKSIPT----EEDAVILGSFLNVCRLNRNAELAGE 582
+ M+ Y + E+ I + + + D + ++ C + L+
Sbjct: 219 -----WNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSES 273
Query: 583 AEEKLLRLEGNNKARYVQLA--NVYAAEGNWAEMGRIRKQM 621
KL G +V+ A +++A GN +I +Q+
Sbjct: 274 IVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQL 314
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 190/605 (31%), Positives = 294/605 (48%), Gaps = 70/605 (11%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N +++ K + A S+F P KD V++NSM+ G + E +E +A+ F M+
Sbjct: 495 NALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFE-EAVSCFHTMKR--N 551
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
+ F+V STL+ C L + GRQ+H K D ++L+ +Y++
Sbjct: 552 GMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAE------- 604
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQ-NG 238
T+ +N C+ K F++ PE D VSWN+ I +
Sbjct: 605 -------TDSINE----------CQ--------KVFFQMPEY-DQVSWNSFIGALAKYEA 638
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
+ LK F+ M + G R N TF + L+A + +IH+ +LK + + + +
Sbjct: 639 SVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIEN 698
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
++ Y KCE M E + M E R + V
Sbjct: 699 ALLAFYGKCEQMEDCEIIF---------------------SRMSERR---------DEVS 728
Query: 359 WTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
W ++ SGY+ + DL+ + + G D +L ACA A L G E+HA
Sbjct: 729 WNSMISGYLHSGILHKAMDLVWPMMQR-GQKLDGFTFATVLSACASVATLERGMEVHACA 787
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
+R ++ D + S LVDMY+KCG + YA F+ R++ +N MI+ YA HGH +KA+
Sbjct: 788 VRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKAL 847
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
+F M + G PD VTFV +LSA H G V+ G K+F SM Y +SP +H++CM+DL
Sbjct: 848 KIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDL 907
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLNV-CRLN-RNAELAGEAEEKLLRLEGNNKA 596
GRA ++K +F+K++P + + +I + L CR N RN EL A + L+ LE N
Sbjct: 908 LGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQNAV 967
Query: 597 RYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNA 656
YV L+N++AA GNW ++ R MR + AGCSWV ++ +H+F GD +HP+
Sbjct: 968 NYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDAGCSWVNMKDGVHLFVAGDQTHPEKEK 1027
Query: 657 IYSVL 661
IY L
Sbjct: 1028 IYEKL 1032
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 139/564 (24%), Positives = 248/564 (43%), Gaps = 87/564 (15%)
Query: 25 TITTNQLIHIYSKHNLLRESRKLFDEMP----------ERNVFSWNTIISACIKSHDLKQ 74
T + +QL + S+ + + S L+D +VF NT+I+ ++ +L
Sbjct: 134 TFSHSQLQQLDSEFDRYKTSSSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVS 193
Query: 75 ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNL 134
AR LFD P K+LV+++ ++ GY +A LF + S+ + + F V S L
Sbjct: 194 ARKLFDEMPQKNLVSWSCLISGYTQNR-MPDEACSLFKGVISSG--LLPNHFAVGSALRA 250
Query: 135 CVKLLNVG--FGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR-CYEEACRVFEGCTEEVN 191
C + + G G Q+HAF+ K + + L+ MYS C ++A RVF+
Sbjct: 251 CQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFD------- 303
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
+ + ++V+WN++IS Y + GDA KLF M
Sbjct: 304 --------------------------EIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQ 337
Query: 252 ENGV----RWNEHTFASALSACCGLRNVKCA--KEIHSWVLKNGLISNPFVSSGIVDVYC 305
GV R NE+T S ++A C L + +++ + + K+G + + +V S +V+ +
Sbjct: 338 MEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFA 397
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
+ M+ A+ + RN+ +++ ++VG + Q EEA + F + K++V
Sbjct: 398 RYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEM--KDLV-------- 447
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG-VQ 424
N E+L LLS F L+ G+E+HAY+ R G V
Sbjct: 448 ---EINSESLVVLLSTFTEFSN----------------LKEGKRKGQEVHAYLFRSGLVD 488
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
+ + LV+MY KC + A +FQ +D V +N MI+ H+ E+A+ F M
Sbjct: 489 ARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTM 548
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
G+ P + ++ LS+ G + +G + + + + + ++ LY +
Sbjct: 549 KRNGMVPSNFSVISTLSSCSSLGWLTLGRQ-IHGEGFKWGLDLDVSVSNALLTLYAETDS 607
Query: 545 LEKAIEFMKSIPTEEDAVILGSFL 568
+ + + +P E D V SF+
Sbjct: 608 INECQKVFFQMP-EYDQVSWNSFI 630
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 144/612 (23%), Positives = 243/612 (39%), Gaps = 98/612 (16%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSK-HNLLRESRKLFDEMPERNVFSWNT 61
S +K + H K I +N L+ +YS + ++ ++FDE+ RN +WN+
Sbjct: 256 STGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNS 315
Query: 62 IISACIKSHDLKQARSLFD----SSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSA 117
IIS + D A LF +L LC + A AD + +E
Sbjct: 316 IISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLT 375
Query: 118 DEHIRMDEFTVTSTLNLCVKLLNVGFGR----QLHAFMVKTSNDASGFAVSSLIDMYSKC 173
R+++ L + L+N GF R + K D + ++ L+ ++
Sbjct: 376 ----RIEKSGFLRDLYVGSALVN-GFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQ 430
Query: 174 RCYEEACRVFEGCTEEVNLISK-------------------------------------- 195
EEA +VF+ + V + S+
Sbjct: 431 HQGEEAAKVFKEMKDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDAR 490
Query: 196 ----NAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
NA+V + ++ A F P D VSWN++ISG N EE + F M
Sbjct: 491 ISIGNALVNMYGKCTAIDNACSVFQLMPS-KDTVSWNSMISGLDHNERFEEAVSCFHTMK 549
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
NG+ + + S LS+C L + ++IH K GL + VS+ ++ +Y + +++N
Sbjct: 550 RNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSIN 609
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
E ++ F + E + V W + K +
Sbjct: 610 -------------------------------ECQKVFFQMPEYDQVSWNSFIGALAKYE- 637
Query: 372 CEALFDLLSEFV--TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
++ L F+ + G + + + +L A + + L G +IHA IL+ V D +
Sbjct: 638 -ASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAI 696
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIE-RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
+ L+ Y KC M EIIF E RD V +N MI+ Y H G KA+ L M+++G
Sbjct: 697 ENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRG 756
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY--ACMIDLYGRANQLE 546
K D TF +LSA C SV E+ + E+D + ++D+Y + +++
Sbjct: 757 QKLDGFTFATVLSA---CASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKID 813
Query: 547 KAIEFMKSIPTE 558
A F + +P
Sbjct: 814 YASRFFELMPVR 825
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 155/365 (42%), Gaps = 65/365 (17%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + K GL L +N L+ +Y++ + + E +K+F +MPE
Sbjct: 580 HGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEY------------------ 621
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
D V++NS + E ALK F+EM A R + T + L
Sbjct: 622 -------------DQVSWNSFIGALAKYEASVLQALKYFLEMMQAG--WRPNRVTFINIL 666
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+G G Q+HA ++K S ++L+ Y KC E+ C +
Sbjct: 667 AAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMED-CEII--------- 716
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
F R E D VSWN++ISGY+ +G + + L M +
Sbjct: 717 ----------------------FSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQ 754
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G + + TFA+ LSAC + ++ E+H+ ++ L S+ V S +VD+Y KC ++Y
Sbjct: 755 RGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDY 814
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
A L VRN +S +SMI GY+ G+ ++A + F + + F G + A +
Sbjct: 815 ASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSH 874
Query: 373 EALFD 377
L D
Sbjct: 875 VGLVD 879
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 12/110 (10%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
L+ + H A++A L + + L+ +Y+K + + + F+ MP RN++SWN++IS
Sbjct: 776 TLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMIS 835
Query: 65 ACIKSHDLKQARSLFD------SSPHKDLVTYNSML--CGYINA--EGYE 104
+ ++A +F SP D VT+ +L C ++ EGY+
Sbjct: 836 GYARHGHGQKALKIFTRMKQHGQSP--DHVTFVGVLSACSHVGLVDEGYK 883
>gi|224107245|ref|XP_002314420.1| predicted protein [Populus trichocarpa]
gi|222863460|gb|EEF00591.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 166/576 (28%), Positives = 302/576 (52%), Gaps = 8/576 (1%)
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+IS +KS +L AR LF+ P K V+Y +M+ G++ + + +A+K++ EM+S +
Sbjct: 1 MISGYVKSGNLDDARKLFEVMPQKGCVSYTTMIMGFVKND-FWGEAIKVYKEMRSVG--V 57
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+E T+ S ++ C ++ + R LH ++K D ++L++MY EA
Sbjct: 58 VPNEVTMASVISACCRVGRIWDCRMLHGLVIKMMFDGFVLVSTNLLNMYCASSSLGEARA 117
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F+ +E N++S N M+ + G +A + F P+ D VSW T+I GYV+
Sbjct: 118 LFDE-MQEKNVVSWNVMLNGYSKAGFANLAKEVFEMIPD-KDIVSWGTIIDGYVRVERLR 175
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E L ++ M G+ +E T +SAC + +++H V+K FV + ++
Sbjct: 176 EALMMYRLMVSTGLGPSEVTMIDLISACGRAMAIVEGQQLHCVVVKTSFDCYDFVQATVI 235
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
Y C +N A L + S +++I G+ +++AR F+ + E++V W+
Sbjct: 236 HFYSACGRINEACFQLEFGMKDHVASRNALIAGFIRNRIIDQARELFNEMPERDVFSWST 295
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+ SGY ++ +L VT G+ + + +V + A A L G+ H Y+
Sbjct: 296 MISGYTQSDQPGMALELFHRMVT-SGIRPNEVTMVSVFSAIAALGTLKEGRWAHEYVHYN 354
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL--YNVMIACYAHHGHEEKAIL 479
+ ++ L ++++DMY+KCG++ A +F ++ + +N +I A HGH + ++
Sbjct: 355 SIPLNDNLSASIIDMYAKCGSINTALEVFYQIRDKASTVSPWNTIICGLATHGHAKLSLE 414
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
++ ++ + IK A+TF+ +LSA H G V +G+ YF SM + Y I P+ HY CM+DL
Sbjct: 415 IYSDLQRRHIKLSAITFIGVLSACCHAGLVGLGKSYFKSMKSKYNIDPDIRHYGCMVDLL 474
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYV 599
G+A +LE+ E ++S+P + D VI G L+ C+ +RN + A E L +L+ ++ +
Sbjct: 475 GKAGRLEEVEELIRSMPMKADVVIWGMLLSACKTHRNITIGERAAENLAKLDPSHGPSRI 534
Query: 600 QLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWV 635
L+N+YA G W + +R+ M+ + +R G S V
Sbjct: 535 LLSNLYADVGRWEDAFLVRRVMQSHRMHRLPGYSGV 570
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/461 (26%), Positives = 220/461 (47%), Gaps = 38/461 (8%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H IK + + L+++Y + L E+R LFDEM E+NV SWN +++ K+
Sbjct: 84 HGLVIKMMFDGFVLVSTNLLNMYCASSSLGEARALFDEMQEKNVVSWNVMLNGYSKAGFA 143
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
A+ +F+ P KD+V++ +++ GY+ E +AL ++ M S + E T+ +
Sbjct: 144 NLAKEVFEMIPDKDIVSWGTIIDGYVRVERLR-EALMMYRLMVSTG--LGPSEVTMIDLI 200
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C + + + G+QLH +VKTS D F +++I YS C EAC E ++ ++
Sbjct: 201 SACGRAMAIVEGQQLHCVVVKTSFDCYDFVQATVIHFYSACGRINEACFQLEFGMKD-HV 259
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
S+NA++A R ++ A + F PE D SW+T+ISGY Q+ L+LF RM
Sbjct: 260 ASRNALIAGFIRNRIIDQARELFNEMPE-RDVFSWSTMISGYTQSDQPGMALELFHRMVT 318
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+G+R NE T S SA L +K + H +V N + N +S+ I+D+Y KC ++N
Sbjct: 319 SGIRPNEVTMVSVFSAIAALGTLKEGRWAHEYVHYNSIPLNDNLSASIIDMYAKCGSINT 378
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
A + + +R+ S V W + G +
Sbjct: 379 A--LEVFYQIRDKAS---------------------------TVSPWNTIICGLATHGHA 409
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE-IHAYILRMGVQMDKKLIS 431
+ ++ S+ + + + A+ + +L AC + GK + + + D +
Sbjct: 410 KLSLEIYSD-LQRRHIKLSAITFIGVLSACCHAGLVGLGKSYFKSMKSKYNIDPDIRHYG 468
Query: 432 TLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMI-ACYAH 470
+VD+ K G + E + ++ ++ D+V++ +++ AC H
Sbjct: 469 CMVDLLGKAGRLEEVEELIRSMPMKADVVIWGMLLSACKTH 509
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 120/270 (44%), Gaps = 36/270 (13%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R++ + E H +K +IH YS + E+ + + +V S N
Sbjct: 205 RAMAIVEGQQLHCVVVKTSFDCYDFVQATVIHFYSACGRINEACFQLEFGMKDHVASRNA 264
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I+ I++ + QAR LF+ P +D+ ++++M+ GY ++ AL+LF M ++ I
Sbjct: 265 LIAGFIRNRIIDQARELFNEMPERDVFSWSTMISGYTQSD-QPGMALELFHRMVTSG--I 321
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
R +E T+ S + L + GR H ++ S + +S+IDMY+KC
Sbjct: 322 RPNEVTMVSVFSAIAALGTLKEGRWAHEYVHYNSIPLNDNLSASIIDMYAKC-------- 373
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVS-WNTLISGYVQNGDA 240
G + AL+ F++ + VS WNT+I G +G A
Sbjct: 374 ------------------------GSINTALEVFYQIRDKASTVSPWNTIICGLATHGHA 409
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACC 270
+ L+++ + ++ + TF LSACC
Sbjct: 410 KLSLEIYSDLQRRHIKLSAITFIGVLSACC 439
>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 192/689 (27%), Positives = 314/689 (45%), Gaps = 105/689 (15%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
++F N +I+ K L +A LFD P ++L+++NS++ G+ + G+ +A + F +
Sbjct: 244 DLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGF-SENGFWLEAYRAFRSL 302
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
+ + + D T+ + L +C NV G +H VK ++LIDMYSKC
Sbjct: 303 LESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCG 362
Query: 175 C-------------------------YEEACRVFE------------------------- 184
C Y VFE
Sbjct: 363 CLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNL 422
Query: 185 --GCTEEVNLIS-------------------KNAMVAACCREGEMEMALKTFWRQPELND 223
C EE L+S NA +AA + G + A F+
Sbjct: 423 LPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGM-NTKS 481
Query: 224 AVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHS 283
SWN +I G+ QNGD + L + M G+ ++ + S L AC L ++ KEIH
Sbjct: 482 VSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHG 541
Query: 284 WVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEE 343
+VL+NGL N FV+ ++ +Y C Y
Sbjct: 542 FVLRNGLEMNSFVAVSLLSLYFHCSKPFYG------------------------------ 571
Query: 344 ARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACA 403
R +F+ + +KN V W A+ SGY + + L + ++ +G+ D + + +LGAC+
Sbjct: 572 -RTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLS-DGLEPDEIAIASILGACS 629
Query: 404 LQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNV 463
+AL GKE+H + L+ + D + +L+DMY+K G + +++ IF +++ +NV
Sbjct: 630 QLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNV 689
Query: 464 MIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADY 523
MI + HG KA+ LFE+M +PD TF+ +L A H G V G Y M Y
Sbjct: 690 MITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLY 749
Query: 524 KISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEA 583
K+ PE +HYAC+ID+ GRA +L +A+ F+ +P E DA I S L+ + E+ +
Sbjct: 750 KLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKF 809
Query: 584 EEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHI 643
EKLL LE N Y+ L+N+YA G W + +R++M+ + + GCSW+ + +++
Sbjct: 810 AEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYS 869
Query: 644 FTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
F G+ S+P ++ I + ++ EI
Sbjct: 870 FIAGENSNPSSDEIRKMWNRLEKQIVEIG 898
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 131/543 (24%), Positives = 228/543 (41%), Gaps = 116/543 (21%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A+K GL + N +I +Y K L E+ +LFD+MPE+N+ SWN++I
Sbjct: 233 HGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRG------- 285
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+ G+ +A + F + + + + D T+ + L
Sbjct: 286 -------------------------FSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLL 320
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+C NV G +H VK ++LIDMYSKC C EA +F E ++
Sbjct: 321 PVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRK-IENKSV 379
Query: 193 ISKNAMVAACCREG---EMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
+S N+M+ A REG E L+ W + EL +
Sbjct: 380 VSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEV------------------------- 414
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
NE T + L AC + + +H + L++ +++ + Y KC +
Sbjct: 415 --------NEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGS 466
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
+ +AE + F + K+V W A+ G+ A
Sbjct: 467 LVFAEHV-------------------------------FFGMNTKSVSSWNAVIGGH--A 493
Query: 370 QNCEALFDLLSEF-VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK 428
QN + + L F +T+ G++ D +V LL AC L GKEIH ++LR G++M+
Sbjct: 494 QNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSF 553
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
+ +L+ +Y C Y F+ +++ V +N M++ Y+ + +A+ LF +ML G
Sbjct: 554 VAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDG 613
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYF-----NSMTADYKISPETDHYAC-MIDLYGRA 542
++PD + +IL A ++ +G++ NS+ D + AC ++D+Y ++
Sbjct: 614 LEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMED-------NFVACSLMDMYAKS 666
Query: 543 NQL 545
L
Sbjct: 667 GFL 669
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 116/479 (24%), Positives = 209/479 (43%), Gaps = 76/479 (15%)
Query: 74 QARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLN 133
++R +FD +K+L +N+++ GY+ E Y+ +A+ F+E+ S E + D FT +
Sbjct: 161 ESRLVFDRLLNKNLFQWNALVSGYVRNELYD-EAIHTFLELISVTE-FQPDNFTFPCLIK 218
Query: 134 LCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLI 193
C ++ G+ +H VK F +++I +Y KC
Sbjct: 219 ACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKC-------------------- 258
Query: 194 SKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE- 252
G ++ A++ F + PE N +SWN+LI G+ +NG E + F + E
Sbjct: 259 ------------GFLDEAVELFDKMPEQN-LISWNSLIRGFSENGFWLEAYRAFRSLLES 305
Query: 253 -NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
+G+ + T + L C G NV IH +K GL+ V + ++D+Y KC
Sbjct: 306 GDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKC---- 361
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
G + EA F + K+VV W ++ Y +
Sbjct: 362 ---------------------------GCLSEAAILFRKIENKSVVSWNSMIGAYSREGF 394
Query: 372 CEALFDLLSEFVTKEGVV-TDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
FDLL + +E ++ + + ++ LL AC ++ L + +H Y LR Q + +
Sbjct: 395 VFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELIN 454
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+ + Y+KCG++ +AE +F + + +N +I +A +G KA+ + EM GI
Sbjct: 455 NAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGIL 514
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFN-------SMTADYKISPETDHYACMIDLYGRA 542
PD + V++L A G ++ G++ M + +S + ++ C YGR
Sbjct: 515 PDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRT 573
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 110/228 (48%), Gaps = 4/228 (1%)
Query: 329 SSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGV 388
+ +I YS+ G E+R FD L KN+ W AL SGYV+ + + E ++
Sbjct: 147 TRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEF 206
Query: 389 VTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEI 448
D L+ AC + +H GK +H ++MG+ MD + + ++ +Y KCG + A
Sbjct: 207 QPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVE 266
Query: 449 IFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK--GIKPDAVTFVAILSAFRHC 506
+F E++L+ +N +I ++ +G +A F +LE G+ PD T V +L
Sbjct: 267 LFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGE 326
Query: 507 GSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQL-EKAIEFMK 553
G+V++G + M + E +ID+Y + L E AI F K
Sbjct: 327 GNVDVG-MVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRK 373
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 93/218 (42%), Gaps = 36/218 (16%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
E N F +++S R+ F+ K+ V +N+ML GY E +AL LF
Sbjct: 549 EMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNE-LPNEALSLFR 607
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
+M S + + DE + S L C +L +G G+++H F +K S F SL+DMY+K
Sbjct: 608 QMLS--DGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAK 665
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
+ R+F R E+A SWN +I+
Sbjct: 666 SGFLGHSQRIFN-------------------RLNGKEVA--------------SWNVMIT 692
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACC 270
G+ +G + ++LF M + + + TF L ACC
Sbjct: 693 GFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACC 730
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 64/134 (47%), Gaps = 2/134 (1%)
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
D L + L+ MYS CG + ++F + ++L +N +++ Y + ++AI F E++
Sbjct: 142 DFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELI 201
Query: 486 E-KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
+PD TF ++ A + +G K + M + + MI LYG+
Sbjct: 202 SVTEFQPDNFTFPCLIKACTGKCDIHLG-KSVHGMAVKMGLIMDLFVGNAMIALYGKCGF 260
Query: 545 LEKAIEFMKSIPTE 558
L++A+E +P +
Sbjct: 261 LDEAVELFDKMPEQ 274
>gi|357154550|ref|XP_003576820.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 657
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 172/599 (28%), Positives = 284/599 (47%), Gaps = 37/599 (6%)
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
+SA + L AR LFD P D YN+++ Y N++ + +AL+L I
Sbjct: 55 LSAGDRDGGLCHARRLFDRIPEPDRFMYNTLVRAYSNSDCPQ-EALRL--HRGVLQRGIL 111
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
+EFT+ L C + V H +VK F ++L+ ++ ++ R
Sbjct: 112 PNEFTLPFVLKACTTVRAVEHALAAHGVVVKLGFVQQIFVANALLHFHASAGSLRDSRRF 171
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
F GEM + VSWNT+I GY Q G+ E
Sbjct: 172 F----------------------GEMAD-----------RNVVSWNTMIGGYAQAGEVSE 198
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
LF M G+ + T S L AC N++ + +H +L +G + + + ++D
Sbjct: 199 ACALFGEMRHQGLLADVFTLVSLLFACSSEGNLEVGRLVHCHMLVSGSRVDRILGNALLD 258
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
+Y KC ++ A + ++N + +SM+ + G+++ R F+ + E+N+V W A+
Sbjct: 259 MYGKCGDLWMAHRCFDMMPIKNVVTWTSMLCAQAKHGSVDAVRDWFEQMPERNIVSWNAM 318
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
S YV+ DL + + G+ D L +L AC L GK IH Y+
Sbjct: 319 ISCYVQCGRLHETLDLYNRMRSL-GITPDEFTLAGVLSACGQNGDLASGKMIHCYVRDNF 377
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
L+++L+DMY++CG + A +F ++++ +NV+I A HG ++ + F
Sbjct: 378 NDPGVTLLNSLLDMYARCGQVDTAIGLFTEMPNKNVISWNVIIGALAMHGRAQETVTFFR 437
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRA 542
M+ PD +TFV +LSA H G +E GE YF +M Y + PE +HY CM+DL GR
Sbjct: 438 TMVSDAFSPDEITFVGLLSACSHGGLLEAGEYYFEAMARVYNVEPEVEHYGCMVDLLGRR 497
Query: 543 NQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLA 602
L KA+ +K + + D V+ G+ L CR++ N E+ ++LL LEG +V +
Sbjct: 498 GHLAKAVNLIKDMSIKPDVVVWGALLGACRIHGNVEIGKLVIKQLLELEGITGGLFVLIC 557
Query: 603 NVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
N++ W +M ++RK M+ + G S + V++ IH F V D+ H TN IY+ +
Sbjct: 558 NLFYETNQWEDMKKLRKLMKEQGTKKDMGVSSIEVKNIIHEFGVEDLRHESTNEIYAAV 616
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 143/563 (25%), Positives = 233/563 (41%), Gaps = 116/563 (20%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
++ AL H +K G N L+H ++ LR+SR+ F EM +RNV
Sbjct: 130 VEHALAAHGVVVKLGFVQQIFVANALLHFHASAGSLRDSRRFFGEMADRNV--------- 180
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
V++N+M+ GY A G ++A LF EM+ + + D
Sbjct: 181 ----------------------VSWNTMIGGYAQA-GEVSEACALFGEMRH--QGLLADV 215
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
FT+ S L C N+ GR +H M+ + + ++L+DMY KC A R F+
Sbjct: 216 FTLVSLLFACSSEGNLEVGRLVHCHMLVSGSRVDRILGNALLDMYGKCGDLWMAHRCFDM 275
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
+ N+++ +M+ A + G ++ F + PE N VSWN +IS YVQ G E L
Sbjct: 276 MPIK-NVVTWTSMLCAQAKHGSVDAVRDWFEQMPERN-IVSWNAMISCYVQCGRLHETLD 333
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVS--SGIVDV 303
L+ RM G+ +E T A LSAC ++ K IH +V N ++P V+ + ++D+
Sbjct: 334 LYNRMRSLGITPDEFTLAGVLSACGQNGDLASGKMIHCYVRDN--FNDPGVTLLNSLLDM 391
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y +C G ++ A F + KNV+ W +
Sbjct: 392 YARC-------------------------------GQVDTAIGLFTEMPNKNVISWNVII 420
Query: 364 SG---YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
+ +AQ F + + D + V LL AC+ H +L
Sbjct: 421 GALAMHGRAQETVTFFRTM----VSDAFSPDEITFVGLLSACS-----------HGGLLE 465
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
G + + +Y+ +E ++ Y M+ GH KA+ L
Sbjct: 466 AG----EYYFEAMARVYN---------------VEPEVEHYGCMVDLLGRRGHLAKAVNL 506
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
++M IKPD V + A+L A R G+VE+G+ + I+ + + +L+
Sbjct: 507 IKDM---SIKPDVVVWGALLGACRIHGNVEIGKLVIKQLLELEGITGGL--FVLICNLFY 561
Query: 541 RANQLE---KAIEFMKSIPTEED 560
NQ E K + MK T++D
Sbjct: 562 ETNQWEDMKKLRKLMKEQGTKKD 584
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 172/399 (43%), Gaps = 65/399 (16%)
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
LI+ ++A R+G + A + F R PE D +NTL+ Y + +E L+L +
Sbjct: 47 QLIASYCTLSAGDRDGGLCHARRLFDRIPE-PDRFMYNTLVRAYSNSDCPQEALRLHRGV 105
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
+ G+ NE T L AC +R V+ A H V+K G + FV++ ++ + ++
Sbjct: 106 LQRGILPNEFTLPFVLKACTTVRAVEHALAAHGVVVKLGFVQQIFVANALLHFHASAGSL 165
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
+ RN S ++MI GY+ G + EA ALF G ++ Q
Sbjct: 166 RDSRRFFGEMADRNVVSWNTMIGGYAQAGEVSEA---------------CALF-GEMRHQ 209
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
G++ D LV LL AC+ + L G+ +H ++L G ++D+ L
Sbjct: 210 ----------------GLLADVFTLVSLLFACSSEGNLEVGRLVHCHMLVSGSRVDRILG 253
Query: 431 STLVDMYSKCGNM----------------TYAEII---------------FQNFIERDLV 459
+ L+DMY KCG++ T+ ++ F+ ER++V
Sbjct: 254 NALLDMYGKCGDLWMAHRCFDMMPIKNVVTWTSMLCAQAKHGSVDAVRDWFEQMPERNIV 313
Query: 460 LYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSM 519
+N MI+CY G + + L+ M GI PD T +LSA G + G K +
Sbjct: 314 SWNAMISCYVQCGRLHETLDLYNRMRSLGITPDEFTLAGVLSACGQNGDLASG-KMIHCY 372
Query: 520 TADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE 558
D P ++D+Y R Q++ AI +P +
Sbjct: 373 VRDNFNDPGVTLLNSLLDMYARCGQVDTAIGLFTEMPNK 411
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 162/392 (41%), Gaps = 65/392 (16%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
NL+ + H + +G + I N L+ +Y K L + + FD MP +NV +W +++
Sbjct: 230 NLEVGRLVHCHMLVSGSRVDRILGNALLDMYGKCGDLWMAHRCFDMMPIKNVVTWTSMLC 289
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
A K + R F+ P +++V++N+M+ Y+ G + L L+ M+S I D
Sbjct: 290 AQAKHGSVDAVRDWFEQMPERNIVSWNAMISCYVQC-GRLHETLDLYNRMRSLG--ITPD 346
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
EFT+ L+ C + ++ G+ +H ++ ND ++SL+DMY++C
Sbjct: 347 EFTLAGVLSACGQNGDLASGKMIHCYVRDNFNDPGVTLLNSLLDMYARC----------- 395
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
G+++ A+ F P N +SWN +I +G A+E +
Sbjct: 396 ---------------------GQVDTAIGLFTEMPNKN-VISWNVIIGALAMHGRAQETV 433
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
F M + +E TF LSAC H +L+ G + + VY
Sbjct: 434 TFFRTMVSDAFSPDEITFVGLLSACS-----------HGGLLEAG----EYYFEAMARVY 478
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
+ + M+ L G R + + ++ D + +VVVW AL
Sbjct: 479 NVEPEVEHYGCMVDLLGRRGHLAKAVNLIK--------------DMSIKPDVVVWGALLG 524
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILV 396
N E ++ + + EG+ +L+
Sbjct: 525 ACRIHGNVEIGKLVIKQLLELEGITGGLFVLI 556
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 119/274 (43%), Gaps = 16/274 (5%)
Query: 297 SSGIVDVYCKCENMNYAESM---LLLKGVRNSFSISSMIVGY-------SLQGNMEEARR 346
S ++++ +C ++ + + + L++ G + S++S ++ G + ARR
Sbjct: 10 SRHVLELLRQCRSIQHLDQIHAHLVVHGFSDVSSVASQLIASYCTLSAGDRDGGLCHARR 69
Query: 347 HFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQA 406
FD + E + ++ L Y + +C L V + G++ + L +L AC
Sbjct: 70 LFDRIPEPDRFMYNTLVRAYSNS-DCPQEALRLHRGVLQRGILPNEFTLPFVLKACTTVR 128
Query: 407 ALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIA 466
A+ H ++++G + + L+ ++ G++ + F +R++V +N MI
Sbjct: 129 AVEHALAAHGVVVKLGFVQQIFVANALLHFHASAGSLRDSRRFFGEMADRNVVSWNTMIG 188
Query: 467 CYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKIS 526
YA G +A LF EM +G+ D T V++L A G++E+G M
Sbjct: 189 GYAQAGEVSEACALFGEMRHQGLLADVFTLVSLLFACSSEGNLEVGRLVHCHMLVS---G 245
Query: 527 PETDHYA--CMIDLYGRANQLEKAIEFMKSIPTE 558
D ++D+YG+ L A +P +
Sbjct: 246 SRVDRILGNALLDMYGKCGDLWMAHRCFDMMPIK 279
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 190/676 (28%), Positives = 318/676 (47%), Gaps = 103/676 (15%)
Query: 26 ITTNQLIHIYSKH-NLLRESRKLFDEMPERNVFS--WNTIISACIKSHDLKQARS-LFDS 81
+ T H+ S++ NL + K P R S +N+++ C+ LKQ + L +
Sbjct: 2 LRTKASPHLISRYLNLQKPHSK---PNPNRQALSDKFNSLLQQCLSIKQLKQIHAQLLTN 58
Query: 82 SPHK---------DL------------------VTYNSMLCGYINAEGYEADALKLFIEM 114
S HK DL ++N M+ G A + AL+ + M
Sbjct: 59 SIHKPNSFLYKIADLKDFAYASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRM 118
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
+ ++ + T C LL V GR H +++ D G SLI MY++C
Sbjct: 119 KFLG--LKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCG 176
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
+A +VF+ +++ D VSWN++ISGY
Sbjct: 177 KMGDARKVFDEISQK---------------------------------DLVSWNSMISGY 203
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
+ A E + LF M E G + NE + S L AC L ++K + +V++N + N
Sbjct: 204 SKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNY 263
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
F+ S ++ +Y KC G++ ARR FDS+ +K
Sbjct: 264 FMGSALIHMYGKC-------------------------------GDLVSARRIFDSMKKK 292
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
+ V W A+ +GY + E L + + D + L+ +L ACA AL GK++
Sbjct: 293 DKVTWNAMITGYAQNGMSEEAIKLFQD-MRMSSTAPDQITLIGILSACASIGALDLGKQV 351
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
Y G Q D + + LVDMY+KCG++ A +F +++ V +N MI+ A HG
Sbjct: 352 EIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISALAFHGQA 411
Query: 475 EKAILLFEEMLEKG--IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
++A+ LF+ M+ +G + P+ +TFV +LSA H G V+ G + F+ M++ + + P+ +HY
Sbjct: 412 QEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHY 471
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
+CM+DL+ RA LE+A +F+ ++P + D VILG+ L C+ +N +++ + LL LE
Sbjct: 472 SCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELEP 531
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
+N YV + +YA W + R+R M+ ++ GCSW+ + ++H F GDV H
Sbjct: 532 SNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHQ 591
Query: 653 KTNAIYSVLAIFTGEL 668
+ I+ +L + +L
Sbjct: 592 EWIEIHQILDLLIDDL 607
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 102/468 (21%), Positives = 193/468 (41%), Gaps = 102/468 (21%)
Query: 4 LNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
L ++ + H I+ GL ++ LI +Y++ + ++RK+FDE+ ++++ SWN++I
Sbjct: 141 LAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMI 200
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
S Y+ M + +A+ LF EM A +
Sbjct: 201 SG------------------------YSKMR--------HAGEAVGLFREMMEAG--FQP 226
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
+E ++ S L C +L ++ G + F+V+ + F S+LI MY KC A R+F
Sbjct: 227 NEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIF 286
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
+ ++ + ++ NAM+ +GY QNG +EE
Sbjct: 287 DSMKKK-DKVTWNAMI--------------------------------TGYAQNGMSEEA 313
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
+KLF M + ++ T LSAC + + K++ + + G + +V + +VD+
Sbjct: 314 IKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDM 373
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y KC G+++ A R F + +KN V W A+
Sbjct: 374 YAKC-------------------------------GSLDNAFRVFYGMPKKNEVSWNAMI 402
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVT-DALILVILLGACALQAALHPGKEI-HAYILRM 421
S + L + + G V+ + + V +L AC + G+ + H
Sbjct: 403 SALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSF 462
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER--DLVLYNVMIAC 467
G+ + S +VD++S+ G++ A E+ +++L ++ AC
Sbjct: 463 GLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGAC 510
>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 168/500 (33%), Positives = 271/500 (54%), Gaps = 45/500 (9%)
Query: 164 SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELND 223
+S++ YS R + R E ++ S N M+A ++E A + F+ Q + D
Sbjct: 40 NSMLAGYSNRRGKIKVARQLFDRIPEPDIFSYNIMLACYLHNADVESA-RLFFDQMPVKD 98
Query: 224 AVSWNTLISGYVQNGDAEEGLKLFVRMG-ENGVRWNEHTFASALSACCGLRNVKCAKEIH 282
SWNT+ISG+ QNG ++ +LF+ M N V WN
Sbjct: 99 TASWNTMISGFSQNGMMDQARELFLVMPVRNSVSWN------------------------ 134
Query: 283 SWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNME 342
+IS +V SG +D+ A+ + + VR+ + ++MI G+ G +E
Sbjct: 135 ------AMISG-YVESGDLDL---------AKQLFEVAPVRSVVAWTAMITGFMKFGKIE 178
Query: 343 EARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDL-LSEFVTKEGVVTDALILVILLGA 401
A ++F+ + KN+V W A+ +GY+ +NC+A L L + + + G + L +L
Sbjct: 179 LAEKYFEEMPMKNLVTWNAMIAGYI--ENCQAENGLKLFKRMVESGFRPNPSSLSSVLLG 236
Query: 402 CALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLY 461
C+ +AL GK++H I + V + ++L+ MY KCG++ A +F ++D+V +
Sbjct: 237 CSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTW 296
Query: 462 NVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTA 521
N MI+ YA HG EKA+ LF++M ++G+KPD +TFVA+LSA H G V++G +YFNSM
Sbjct: 297 NAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVR 356
Query: 522 DYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAG 581
DY + + DHY C++DL GR +L +A++ +K +P + + I G+ L CR+++N ELA
Sbjct: 357 DYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKMPFKPHSAIFGTLLGACRIHKNLELAE 416
Query: 582 EAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEI 641
A + LL L+ + A YVQLANVYAA W + +R+ M+ K + G SW+ V+ +
Sbjct: 417 FAAKNLLNLDPESAAGYVQLANVYAAMNRWDHVAMVRRSMKDNKVIKTPGYSWIEVKSVV 476
Query: 642 HIFTVGDVSHPKTNAIYSVL 661
H F GD HP+ I+ L
Sbjct: 477 HEFRSGDRIHPELAFIHEKL 496
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/478 (24%), Positives = 215/478 (44%), Gaps = 84/478 (17%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYS-KHNLLRESRKLFDEMPERNVFSW 59
+RS +L AL + ++ TT+T N ++ YS + ++ +R+LFD +PE ++FS+
Sbjct: 16 IRSGDLNSAL----RVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDRIPEPDIFSY 71
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N +++ + + D++ AR FD P KD ++N+M+ G+ + G A +LF+ M +
Sbjct: 72 NIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGF-SQNGMMDQARELFLVMPVRNS 130
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
V + SG+ S +D+ A
Sbjct: 131 --------------------------------VSWNAMISGYVESGDLDL---------A 149
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
++FE ++++ AM+ + G++E+A K F P + + V+WN +I+GY++N
Sbjct: 150 KQLFE-VAPVRSVVAWTAMITGFMKFGKIELAEKYFEEMP-MKNLVTWNAMIAGYIENCQ 207
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
AE GLKLF RM E+G R N + +S L C L +K K++H + K+ + N +
Sbjct: 208 AENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTS 267
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
++ +YCKC ++ A + L+ ++ + ++MI GY+ G E+A FD + +
Sbjct: 268 LLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRD------ 321
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
EG+ D + V +L AC + G E ++
Sbjct: 322 --------------------------EGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMV 355
Query: 420 R-MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQN--FIERDLVLYNVMIACYAHHGHE 474
R GV+ + +VD+ + G + A + + F + ++ AC H E
Sbjct: 356 RDYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKMPFKPHSAIFGTLLGACRIHKNLE 413
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/295 (19%), Positives = 135/295 (45%), Gaps = 32/295 (10%)
Query: 292 SNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYS-LQGNMEEARRHFDS 350
SN S+ ++ + + ++N A + V+ + + +SM+ GYS +G ++ AR+ FD
Sbjct: 3 SNVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDR 62
Query: 351 LTEKNVVVWTALFSGYVKAQNCEA---LFD------------LLSEFVTKEGVVTDALIL 395
+ E ++ + + + Y+ + E+ FD ++S F ++ G++ A L
Sbjct: 63 IPEPDIFSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGF-SQNGMMDQAREL 121
Query: 396 VILLGACALQAALHPGKEIHAYILRMGVQMDKKLI-----------STLVDMYSKCGNMT 444
+++ ++ ++ I Y+ + + K+L + ++ + K G +
Sbjct: 122 FLVM---PVRNSVSWNAMISGYVESGDLDLAKQLFEVAPVRSVVAWTAMITGFMKFGKIE 178
Query: 445 YAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR 504
AE F+ ++LV +N MIA Y + E + LF+ M+E G +P+ + ++L
Sbjct: 179 LAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCS 238
Query: 505 HCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE 559
+ ++++G K + + +S ++ +Y + LE A + +P ++
Sbjct: 239 NLSALKLG-KQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKD 292
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 172/606 (28%), Positives = 300/606 (49%), Gaps = 69/606 (11%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
E +VF ++ K L +A+ LF S H+D+V +N+M+ G + G DA++L +
Sbjct: 141 ESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAG-CSLYGLCDDAVQLIM 199
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
+MQ +E I + T+ L + +G G+ LH + V+ S D + L+DMY+K
Sbjct: 200 QMQ--EEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAK 257
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C+C A ++F+ M ++ + VSW+ +I
Sbjct: 258 CQCLLYARKIFD------------------------VMGVR---------NEVSWSAMIG 284
Query: 233 GYVQNGDAEEGLKLFVRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI 291
GYV + +E L+LF +M ++ + T S L AC L ++ +++H +++K G +
Sbjct: 285 GYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSV 344
Query: 292 SNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL 351
+ + + ++ +Y KC G +++A R FD +
Sbjct: 345 LDILLGNTLLSMYAKC-------------------------------GVIDDAIRFFDEM 373
Query: 352 TEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG 411
K+ V ++A+ SG V+ N + + G+ D ++ +L AC+ AAL G
Sbjct: 374 NPKDSVSFSAIVSGCVQNGNAAVALSIF-RMMQLSGIDPDLTTMLGVLPACSHLAALQHG 432
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
H Y++ G D + + L+DMYSKCG +++A +F D+V +N MI Y H
Sbjct: 433 FCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIH 492
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH 531
G +A+ LF ++L G+KPD +TF+ +LS+ H G V G +F++M+ D+ I P +H
Sbjct: 493 GLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEH 552
Query: 532 YACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLE 591
CM+D+ GRA +++A F++++P E D I + L+ CR+++N EL E +K+ L
Sbjct: 553 CICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLG 612
Query: 592 GNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSH 651
+ +V L+N+Y+A G W + IR + + GCSW+ + +H F GD SH
Sbjct: 613 PESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSH 672
Query: 652 PKTNAI 657
+ + I
Sbjct: 673 LQLSQI 678
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 136/571 (23%), Positives = 236/571 (41%), Gaps = 107/571 (18%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
++S +L EA H +K + ++L +Y N + +R+LFDE+P +V WN
Sbjct: 19 IQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWN 78
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
II A + A L+ S H
Sbjct: 79 QIIRAYAWNGPFDGAIDLYHSMLHLG---------------------------------- 104
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
+R +++T L C LL + G ++H+ ++ F ++L+D Y+KC EA
Sbjct: 105 VRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQ 164
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
R+F + ++++ NAM+A C S Y G
Sbjct: 165 RLFSSMSHR-DVVAWNAMIAGC-----------------------------SLY---GLC 191
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
++ ++L ++M E G+ N T L + + K +H + ++ + V +G+
Sbjct: 192 DDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGL 251
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
+D+Y KC+ + YA + + GVRN S S+MI GY M+EA FD + K+ + T
Sbjct: 252 LDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPT 311
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
+ G V L ACA L G+++H YI++
Sbjct: 312 PVTLGSV-------------------------------LRACAKLTDLSRGRKLHCYIIK 340
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
+G +D L +TL+ MY+KCG + A F +D V ++ +++ +G+ A+ +
Sbjct: 341 LGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSI 400
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC--MIDL 538
F M GI PD T + +L A H +++ G F S TD C +ID+
Sbjct: 401 FRMMQLSGIDPDLTTMLGVLPACSHLAALQHG---FCSHGYLIVRGFATDTLICNALIDM 457
Query: 539 YGRANQLEKAIEFMKSIPTEE----DAVILG 565
Y + ++ A E + + +A+I+G
Sbjct: 458 YSKCGKISFAREVFNRMDRHDIVSWNAMIIG 488
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/452 (23%), Positives = 190/452 (42%), Gaps = 72/452 (15%)
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L C++ ++ +++H +K +++A + L +Y C
Sbjct: 15 LEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCN----------------- 57
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
++ +A + F P + WN +I Y NG + + L+ M
Sbjct: 58 ---------------QVVLARRLFDEIPN-PSVILWNQIIRAYAWNGPFDGAIDLYHSML 101
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
GVR N++T+ L AC GL ++ EIHS GL S+ FV + +VD Y KC
Sbjct: 102 HLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKC---- 157
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
G + EA+R F S++ ++VV W A+ +G
Sbjct: 158 ---------------------------GILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGL 190
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
C+ L+ + + +EG+ ++ +V +L AL GK +H Y +R + +
Sbjct: 191 CDDAVQLIMQ-MQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGT 249
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM-LEKGIK 490
L+DMY+KC + YA IF R+ V ++ MI Y ++A+ LF++M L+ +
Sbjct: 250 GLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMD 309
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA--CMIDLYGRANQLEKA 548
P VT ++L A + G K + K+ D ++ +Y + ++ A
Sbjct: 310 PTPVTLGSVLRACAKLTDLSRGRKLHCYII---KLGSVLDILLGNTLLSMYAKCGVIDDA 366
Query: 549 IEFMKSIPTEEDAVILGSFLNVCRLNRNAELA 580
I F + +D+V + ++ C N NA +A
Sbjct: 367 IRFFDEM-NPKDSVSFSAIVSGCVQNGNAAVA 397
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 101/467 (21%), Positives = 179/467 (38%), Gaps = 107/467 (22%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H ++ + L+ +Y+K L +RK+FD M RN SW+ +I + S +
Sbjct: 233 HGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCM 292
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVT--S 130
K+A LFD KD MD VT S
Sbjct: 293 KEALELFDQMILKD-----------------------------------AMDPTPVTLGS 317
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L C KL ++ GR+LH +++K + ++L+ MY+KC ++A R F+ +
Sbjct: 318 VLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPK- 376
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
+ +S +A+V+ C VQNG+A L +F M
Sbjct: 377 DSVSFSAIVSGC--------------------------------VQNGNAAVALSIFRMM 404
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
+G+ + T L AC L ++ H +++ G ++ + + ++D+Y KC +
Sbjct: 405 QLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKI 464
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL----TEKNVVVWTAL---- 362
++A + + S ++MI+GY + G EA F L + + + + L
Sbjct: 465 SFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSC 524
Query: 363 -------------------FSGYVKAQNCEALFDLLSE---------FVTKEGVVTDALI 394
FS + ++C + D+L F+ D I
Sbjct: 525 SHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRI 584
Query: 395 LVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
LL AC + + G+E+ I +G + + L ++YS G
Sbjct: 585 WSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFV-LLSNIYSAAG 630
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 6/178 (3%)
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD 457
LL AC +L K+IH + L+ D ++ L +Y C + A +F
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFN 517
++L+N +I YA +G + AI L+ ML G++P+ T+ +L A ++E G + +
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVE-IH 132
Query: 518 SMTADYKISPETDHYAC--MIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRL 573
S + + E+D + C ++D Y + L +A S+ + D V + + C L
Sbjct: 133 SHAKMFGL--ESDVFVCTALVDFYAKCGILVEAQRLFSSM-SHRDVVAWNAMIAGCSL 187
>gi|116310106|emb|CAH67125.1| H0315E07.3 [Oryza sativa Indica Group]
gi|222628896|gb|EEE61028.1| hypothetical protein OsJ_14863 [Oryza sativa Japonica Group]
Length = 655
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 176/630 (27%), Positives = 307/630 (48%), Gaps = 63/630 (10%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
T N ++ ++ +L E+RK+FD MP RN SW +++ + + +AR LF+ P +
Sbjct: 66 FTWNCMVSGLIRNRMLAEARKVFDAMPVRNSVSWAALLTGYARCGRVAEARELFNRIPDR 125
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR 145
++V++N+M+ GY G A +LF D D+ + + ++ +K +V R
Sbjct: 126 NVVSWNAMVSGYAR-NGMVKRARELF------DMMPWRDDVSWLTMISGYIKRKHVREAR 178
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
+L M +S +++ Y A V G + N +S N M+ R
Sbjct: 179 ELFDSMPSPPTSVCNALLSGYVEL-----GYMRAAEVLFGQMQTRNPVSWNVMITGYARA 233
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG-ENGVRWNEHTFAS 264
G M +A + F PE D +S ++ GY+QNG + K+F M + V WN
Sbjct: 234 GSMGIAQRLFDEMPE-KDVLSRTAIMRGYLQNGSVDAAWKVFKDMPHRDTVAWNT----- 287
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
++D + + + ++ A + R+
Sbjct: 288 -----------------------------------MMDGFVRNDRLDDALKLFSEMPDRD 312
Query: 325 SFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVT 384
S ++++ GY QG+M+ A F K+ + W L SGY E LLSE +
Sbjct: 313 QISWNAILQGYVQQGDMDSANAWFRRAPNKDAISWNTLISGYKD----EGALSLLSEMI- 367
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
+ G+ D L +++ CA +L GK +H + ++ G + D ++S+L+ MYSKCG ++
Sbjct: 368 RGGLKPDQATLSVVISICASLVSLGCGKMVHLWAIKTGFEHDALVMSSLISMYSKCGLIS 427
Query: 445 YAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR 504
A +F+ ++RD V +N MIA YA+HG ++A+ +F+ M + G +PD TF++ILSA
Sbjct: 428 EASQVFELILQRDTVTWNAMIATYAYHGLADEALKVFDMMTKAGFRPDHATFLSILSACA 487
Query: 505 HCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVIL 564
H G + G +F SM D+ + P +DHY+CM+DL GR+ + +A +F + IP++
Sbjct: 488 HKGYLYEGCYHFRSMQEDWNLVPRSDHYSCMVDLLGRSGFIHQAYDFTRRIPSDHRTTAW 547
Query: 565 GSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQM--R 622
+ +VC + +L +L+ ++ Y L+N+YAA+ W+ +R M R
Sbjct: 548 ETLFSVCNSHGEIQLGEIIARNVLKARPSDGGMYTLLSNIYAAKEMWSSAASVRGFMKER 607
Query: 623 GMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
G+K + GCSW+ ++ E+ F+ D +HP
Sbjct: 608 GLK--KETGCSWIELKGEVVTFSSNDSNHP 635
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 153/330 (46%), Gaps = 48/330 (14%)
Query: 24 TTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP 83
T N L+ Y + +R + LF +M RN SWN +I+ ++ + A+ LFD P
Sbjct: 188 PTSVCNALLSGYVELGYMRAAEVLFGQMQTRNPVSWNVMITGYARAGSMGIAQRLFDEMP 247
Query: 84 HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGF 143
KD+++ +++ GY+ +A A K+F +M D
Sbjct: 248 EKDVLSRTAIMRGYLQNGSVDA-AWKVFKDMPHRDT------------------------ 282
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
A ++++D + + ++A ++F + + IS NA++
Sbjct: 283 -----------------VAWNTMMDGFVRNDRLDDALKLFSEMPDR-DQISWNAILQGYV 324
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
++G+M+ A F R P DA+SWNTLISGY G L L M G++ ++ T +
Sbjct: 325 QQGDMDSANAWFRRAPN-KDAISWNTLISGYKDEG----ALSLLSEMIRGGLKPDQATLS 379
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
+S C L ++ C K +H W +K G + V S ++ +Y KC ++ A + L R
Sbjct: 380 VVISICASLVSLGCGKMVHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQVFELILQR 439
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
++ + ++MI Y+ G +EA + FD +T+
Sbjct: 440 DTVTWNAMIATYAYHGLADEALKVFDMMTK 469
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 127/245 (51%), Gaps = 40/245 (16%)
Query: 25 TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPH 84
T+ N ++ + +++ L ++ KLF EMP+R+ SWN I+ ++ D+ A + F +P+
Sbjct: 282 TVAWNTMMDGFVRNDRLDDALKLFSEMPDRDQISWNAILQGYVQQGDMDSANAWFRRAPN 341
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
KD +++N+++ GY + EG AL L EM ++ D+ T++ +++C L+++G G
Sbjct: 342 KDAISWNTLISGYKD-EG----ALSLLSEMIRGG--LKPDQATLSVVISICASLVSLGCG 394
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
+ +H + +KT + +SSLI MYSKC EA +VFE + + ++ NAM+A
Sbjct: 395 KMVHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQVFELILQR-DTVTWNAMIAT--- 450
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFAS 264
Y +G A+E LK+F M + G R + TF S
Sbjct: 451 -----------------------------YAYHGLADEALKVFDMMTKAGFRPDHATFLS 481
Query: 265 ALSAC 269
LSAC
Sbjct: 482 ILSAC 486
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 103/267 (38%), Gaps = 66/267 (24%)
Query: 348 FDSLTEKNV-------------------------------VVWTALFSGYVKAQNCEALF 376
FD ++E+NV V W AL +GY +
Sbjct: 57 FDEMSERNVFTWNCMVSGLIRNRMLAEARKVFDAMPVRNSVSWAALLTGYARCGRVAEAR 116
Query: 377 DLLSEFVTKEGVVTDALILVILLGACALQAA----LHPGKE-------IHAYILRMGVQM 425
+L + + V +A++ +A + P ++ I YI R V+
Sbjct: 117 ELFNRIPDRNVVSWNAMVSGYARNGMVKRARELFDMMPWRDDVSWLTMISGYIKRKHVRE 176
Query: 426 DKKLIST-----------LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
++L + L+ Y + G M AE++F R+ V +NVMI YA G
Sbjct: 177 ARELFDSMPSPPTSVCNALLSGYVELGYMRAAEVLFGQMQTRNPVSWNVMITGYARAGSM 236
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA- 533
A LF+EM EK D ++ AI+ + GSV+ K F M P D A
Sbjct: 237 GIAQRLFDEMPEK----DVLSRTAIMRGYLQNGSVDAAWKVFKDM-------PHRDTVAW 285
Query: 534 -CMIDLYGRANQLEKAIEFMKSIPTEE 559
M+D + R ++L+ A++ +P +
Sbjct: 286 NTMMDGFVRNDRLDDALKLFSEMPDRD 312
Score = 43.1 bits (100), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 18/175 (10%)
Query: 11 ICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSH 70
+ H+ AIK G + + LI +YSK L+ E+ ++F+ + +R+ +WN +I+
Sbjct: 396 MVHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQVFELILQRDTVTWNAMIATYAYHG 455
Query: 71 DLKQARSLFD----SSPHKDLVTYNSML--CGYINAEGYEADALKLFIEMQSADEHI-RM 123
+A +FD + D T+ S+L C + +GY + F MQ + R
Sbjct: 456 LADEALKVFDMMTKAGFRPDHATFLSILSACAH---KGYLYEGCYHFRSMQEDWNLVPRS 512
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEE 178
D ++ L L GF Q + F + +D A +L +S C + E
Sbjct: 513 DHYSCMVDL-----LGRSGFIHQAYDFTRRIPSDHRTTAWETL---FSVCNSHGE 559
>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
Length = 652
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 184/647 (28%), Positives = 299/647 (46%), Gaps = 102/647 (15%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLV 88
N LI +Y+K + ++ +F + +NVFSW +++A ++ D + F
Sbjct: 14 NLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFF--------- 64
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLH 148
ML IN E ++ L+ C + GR +
Sbjct: 65 --RGMLLQGINP-----------------------GEVGISIFLSACTDAREITIGRSIQ 99
Query: 149 AFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEM 208
++ T + ++L+ +Y K +A VF +
Sbjct: 100 LAILGTGIEEESIVQTALVSLYGKLGHCTDAASVF------------------------L 135
Query: 209 EMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSA 268
M+ + D V+W+ +++ Y +NG E L LF +M +GV N+ T S L A
Sbjct: 136 RMSHR---------DVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDA 186
Query: 269 CCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSI 328
C L +++ +H V G+ S V + +V++Y KC
Sbjct: 187 CASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKC--------------------- 225
Query: 329 SSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGV 388
G +E A F + EKNVV W+A+ + Y + +L + EG+
Sbjct: 226 ----------GRIEAAAEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHR-MDLEGL 274
Query: 389 VTDALILVILLGACALQAALHPGKEIHA--YILRMGVQMDKKLISTLVDMYSKCGNMTYA 446
++ V +L ACA AAL G+ IH ++L G++ D +++ LV+MYSKCGN+ A
Sbjct: 275 APNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTALVNMYSKCGNLALA 334
Query: 447 EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHC 506
+F DLVL+N +IA A HG EKA+ LFE M +G++P +TF ++L A H
Sbjct: 335 GNMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSHA 394
Query: 507 GSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGS 566
G ++ G K+F S D+ I PE +H+ CM+DL GRA + + + + +P E V +
Sbjct: 395 GMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMA 454
Query: 567 FLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKG 626
FL CR RN + A A E L +L+ +A YV L+N+YA G W+++ R+R+ M+
Sbjct: 455 FLGACRTYRNMDGAIWAAENLFQLDPRKRAPYVLLSNMYAKAGRWSDVARMRQAMQLFMT 514
Query: 627 NRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIAG 673
+ AG SW+ V+ +H F GD+ HP+ I++ L T +L + AG
Sbjct: 515 VKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRLT-KLMKAAG 560
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 112/237 (47%), Gaps = 2/237 (0%)
Query: 319 LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDL 378
L +RN F + +I Y+ ++A F + KNV WT + + + + ++ + + L
Sbjct: 4 LGWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCW-L 62
Query: 379 LSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYS 438
+ +G+ + + I L AC + G+ I IL G++ + + + LV +Y
Sbjct: 63 FFRGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYG 122
Query: 439 KCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVA 498
K G+ T A +F RD+V ++ M+A YA +GH +A+ LF +M G+ P+ VT V+
Sbjct: 123 KLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVS 182
Query: 499 ILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSI 555
L A G + G + A I +++LYG+ ++E A E I
Sbjct: 183 GLDACASLGDLRSGALMHQRVEAQ-GIQSGVVVGTALVNLYGKCGRIEAAAEAFGQI 238
>gi|357154827|ref|XP_003576915.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like, partial [Brachypodium distachyon]
Length = 735
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 190/640 (29%), Positives = 303/640 (47%), Gaps = 101/640 (15%)
Query: 9 ALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIK 68
L H +K GL N L+ +Y K + S K+F+ MPERN
Sbjct: 196 GLGVHGLVLKTGLDSIVNLGNALVDMYGKFGHVEASMKVFEGMPERNE------------ 243
Query: 69 SHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
V++NS + ++NA G D L LF M ++ T+
Sbjct: 244 -------------------VSWNSAIGCFLNA-GLYGDVLALFRGM--SERGFMPGSITL 281
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE 188
+S L V+L GR++H + +K + + F +SL+DMY+K E+AC VFE
Sbjct: 282 SSLLPALVELGYFDLGREVHGYSIKRAMELDIFVANSLVDMYAKFGSLEKACAVFE---- 337
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
+ E+ + VSWN +I+ VQNG E L +
Sbjct: 338 -----------------------------KIEVRNVVSWNAMIANLVQNGAESEAFGLVI 368
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
+M ++G N T + L AC + ++K K+IH+W ++ GL+ + F+S+ ++D+Y KC
Sbjct: 369 KMQKDGECPNSITLVNLLPACSRMASLKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCG 428
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
+ A+S+ L ++ S +++I+GYS ++ F+SL
Sbjct: 429 QLRLAQSIFDLS-EKDDVSYNTLILGYS------QSPWSFESLN---------------- 465
Query: 369 AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK 428
LF LS G+ DA+ + L AC ++ GKEIH ++R +
Sbjct: 466 ------LFKQLSSV----GIEYDAISFMGALTACTNLSSFKQGKEIHGVLVRRLLSNHPF 515
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
L +TL+ +Y+K G + A IF E+D+ +N MI Y HG + A LF+ M + G
Sbjct: 516 LANTLLGLYTKGGMLDTASKIFNRIKEKDVASWNNMIMGYGMHGQIDAAFHLFDLMKDHG 575
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
+ D V+++A+LS H G VE G+KYF+ M A + P+ HYACM+DL GR+ QL ++
Sbjct: 576 VTYDHVSYIAVLSVCSHGGLVERGKKYFSHMLAQ-NLEPQQMHYACMVDLLGRSGQLTES 634
Query: 549 IEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAE 608
+E + +P ++ + G+ L CR++ N ELA A + L L+ + Y L N+YA
Sbjct: 635 VEIILDMPFHANSDVWGALLGACRIHGNIELAQYAADHLFELKPEHSGYYSVLRNMYAEA 694
Query: 609 GNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGD 648
G W E +IR M+ K + SWV +++ F VGD
Sbjct: 695 GRWNEAHKIRTLMKSRKVQKNPAYSWVQSGNKLQAFLVGD 734
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 139/554 (25%), Positives = 245/554 (44%), Gaps = 101/554 (18%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACI 67
+ L H A+++G N L+ Y+ ++R++FDEMP R+V SWN+++S+ +
Sbjct: 94 KGLELHAAALRSGHLADVFAGNTLVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSFL 153
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFT 127
A +FD DA + + M + + ++ +
Sbjct: 154 -------ANKMFD-------------------------DARQALLSMMRSG--VPVNVAS 179
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
+ S + C GFG +H ++KT D+ ++L+DMY K E + +VFEG
Sbjct: 180 LVSVVPACGVEQEGGFGLGVHGLVLKTGLDSIVNLGNALVDMYGKFGHVEASMKVFEG-- 237
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
PE N+ VSWN+ I ++ G + L LF
Sbjct: 238 ------------------------------MPERNE-VSWNSAIGCFLNAGLYGDVLALF 266
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
M E G T +S L A L +E+H + +K + + FV++ +VD+Y K
Sbjct: 267 RGMSERGFMPGSITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIFVANSLVDMYAKF 326
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
G++E+A F+ + +NVV W A+ + V
Sbjct: 327 -------------------------------GSLEKACAVFEKIEVRNVVSWNAMIANLV 355
Query: 368 KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDK 427
+ F L+ + + K+G +++ LV LL AC+ A+L GK+IHA+ +R G+ D
Sbjct: 356 QNGAESEAFGLVIK-MQKDGECPNSITLVNLLPACSRMASLKTGKQIHAWSIRTGLMFDL 414
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
+ + L+DMY+KCG + A+ IF + E+D V YN +I Y+ +++ LF+++
Sbjct: 415 FISNALIDMYAKCGQLRLAQSIF-DLSEKDDVSYNTLILGYSQSPWSFESLNLFKQLSSV 473
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEK 547
GI+ DA++F+ L+A + S + G K + + +S ++ LY + L+
Sbjct: 474 GIEYDAISFMGALTACTNLSSFKQG-KEIHGVLVRRLLSNHPFLANTLLGLYTKGGMLDT 532
Query: 548 AIEFMKSIPTEEDA 561
A + I ++ A
Sbjct: 533 ASKIFNRIKEKDVA 546
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 151/353 (42%), Gaps = 49/353 (13%)
Query: 212 LKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCG 271
L F L A WN+L E L ++ M +GV ++ TF AL A
Sbjct: 27 LLLFHHPLRLRSAFLWNSLSRALSSASLPTEALLVYNHMLRSGVSPDDRTFPFALHAAAA 86
Query: 272 LRNVKCAK--EIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSIS 329
AK E+H+ L++G +++ F + +V Y C
Sbjct: 87 AAQAHPAKGLELHAAALRSGHLADVFAGNTLVAFYAAC---------------------- 124
Query: 330 SMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFD-----LLSEFVT 384
G+ +ARR FD + ++VV W +L S ++ +FD LLS +
Sbjct: 125 ---------GHAGDARRVFDEMPARDVVSWNSLVSSFL----ANKMFDDARQALLS--MM 169
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
+ GV + LV ++ AC ++ G +H +L+ G+ L + LVDMY K G++
Sbjct: 170 RSGVPVNVASLVSVVPACGVEQEGGFGLGVHGLVLKTGLDSIVNLGNALVDMYGKFGHVE 229
Query: 445 YAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR 504
+ +F+ ER+ V +N I C+ + G + LF M E+G P ++T ++L A
Sbjct: 230 ASMKVFEGMPERNEVSWNSAIGCFLNAGLYGDVLALFRGMSERGFMPGSITLSSLLPALV 289
Query: 505 HCGSVEMGEKYFNSMTADYKISPETDHYAC--MIDLYGRANQLEKAIEFMKSI 555
G ++G + K + E D + ++D+Y + LEKA + I
Sbjct: 290 ELGYFDLGREVHGY---SIKRAMELDIFVANSLVDMYAKFGSLEKACAVFEKI 339
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 138/353 (39%), Gaps = 69/353 (19%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R +LK H +I+ GL +N LI +Y+K LR ++ +FD
Sbjct: 391 RMASLKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIFD------------ 438
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
KD V+YN+++ GY + + ++L LF ++ S I
Sbjct: 439 --------------------LSEKDDVSYNTLILGYSQSP-WSFESLNLFKQLSSVG--I 475
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
D + L C L + G+++H +V+ F ++L+ +Y+K + A +
Sbjct: 476 EYDAISFMGALTACTNLSSFKQGKEIHGVLVRRLLSNHPFLANTLLGLYTKGGMLDTASK 535
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F E+ D SWN +I GY +G +
Sbjct: 536 IFNRIKEK---------------------------------DVASWNNMIMGYGMHGQID 562
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
LF M ++GV ++ ++ + LS C V+ K+ S +L L + +V
Sbjct: 563 AAFHLFDLMKDHGVTYDHVSYIAVLSVCSHGGLVERGKKYFSHMLAQNLEPQQMHYACMV 622
Query: 302 DVYCKCENMNYA-ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
D+ + + + E +L + NS +++ + GN+E A+ D L E
Sbjct: 623 DLLGRSGQLTESVEIILDMPFHANSDVWGALLGACRIHGNIELAQYAADHLFE 675
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 74/164 (45%), Gaps = 8/164 (4%)
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
G E+HA LR G D +TLV Y+ CG+ A +F RD+V +N +++ +
Sbjct: 95 GLELHAAALRSGHLADVFAGNTLVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSFLA 154
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYF--NSMTADYKISPE 528
+ + A M+ G+ + + V+++ A CG + G + + +
Sbjct: 155 NKMFDDARQALLSMMRSGVPVNVASLVSVVPA---CGVEQEGGFGLGVHGLVLKTGLDSI 211
Query: 529 TDHYACMIDLYGRANQLEKAIEFMKSIPTEEDA---VILGSFLN 569
+ ++D+YG+ +E +++ + +P + +G FLN
Sbjct: 212 VNLGNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLN 255
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 183/611 (29%), Positives = 301/611 (49%), Gaps = 71/611 (11%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGY-EADALKLF 111
+ + F +I A ++ AR +FD KD+V++ M+ Y AE Y D+L LF
Sbjct: 136 QADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACY--AENYCHEDSLLLF 193
Query: 112 IEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYS 171
+M+ R + FT+++ L C L G+ +H +K D + +L+++Y+
Sbjct: 194 CQMRIMG--YRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYT 251
Query: 172 KCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLI 231
K GE+ A + F P+ +D + W+ +I
Sbjct: 252 K--------------------------------SGEIAEAQQFFEEMPK-DDLIPWSLMI 278
Query: 232 SGYVQNGDAEEGLKLFVRMGENGVR-WNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL 290
S Y Q+ ++E L+LF RM ++ V N TFAS L AC L + +IHS VLK GL
Sbjct: 279 SRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGL 338
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
SN FVS+ ++DVY KC G +E + + F
Sbjct: 339 DSNVFVSNALMDVYAKC-------------------------------GEIENSVKLFTG 367
Query: 351 LTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHP 410
TEKN V W + GYV+ + E +L S + + T+ +L + +L AL P
Sbjct: 368 STEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASL-VALEP 426
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
G++IH+ ++ D + ++L+DMY+KCG + A + F ++D V +N +I Y+
Sbjct: 427 GRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSI 486
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD 530
HG +A+ LF+ M + KP+ +TFV +LSA + G ++ G +F SM DY I P +
Sbjct: 487 HGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIE 546
Query: 531 HYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRL 590
HY CM+ L GR+ Q ++A++ + IP + ++ + L C +++N +L +++L +
Sbjct: 547 HYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLGKVCAQRVLEM 606
Query: 591 EGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVS 650
E + A +V L+N+YA W + +RK M+ K + G SWV + +H FTVGD S
Sbjct: 607 EPQDDATHVLLSNMYATAKRWDNVAYVRKNMKKKKVKKEPGLSWVENQGVVHYFTVGDTS 666
Query: 651 HPKTNAIYSVL 661
HP I+++L
Sbjct: 667 HPNIKLIFAML 677
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/496 (21%), Positives = 206/496 (41%), Gaps = 104/496 (20%)
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
MD + + L ++ + G+ LH ++K FA + L++ Y E+A ++
Sbjct: 1 MDSHSYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKL 60
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
F+ EM L + VS+ TL G+ ++ +
Sbjct: 61 FD------------------------EMP---------LTNTVSFVTLAQGFSRSHQFQR 87
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
+L +R+ G N+ F + L + +H++V K G ++ FV + ++D
Sbjct: 88 ARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFVGTALID 147
Query: 303 VYCKCENMN-----------------------YAE------SMLLLKGVR------NSFS 327
Y C N++ YAE S+LL +R N+F+
Sbjct: 148 AYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFT 207
Query: 328 ISS-----------------------------MIVG------YSLQGNMEEARRHFDSLT 352
IS+ + VG Y+ G + EA++ F+ +
Sbjct: 208 ISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMP 267
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
+ +++ W+ + S Y ++ + +L VV + +L ACA L+ G
Sbjct: 268 KDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGN 327
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
+IH+ +L++G+ + + + L+D+Y+KCG + + +F E++ V +N +I Y G
Sbjct: 328 QIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLG 387
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
EKA+ LF ML I+P VT+ ++L A ++E G + +S+T + ++
Sbjct: 388 DGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQ-IHSLTIKTMYNKDSVVA 446
Query: 533 ACMIDLYGRANQLEKA 548
+ID+Y + +++ A
Sbjct: 447 NSLIDMYAKCGRIDDA 462
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 132/304 (43%), Gaps = 37/304 (12%)
Query: 258 NEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESML 317
+ H++A+ L R+ K +H +LK+G + F + +++ Y
Sbjct: 2 DSHSYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHF---------- 51
Query: 318 LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFD 377
G +E+A + FD + N V + L G+ ++ +
Sbjct: 52 ---------------------GFLEDASKLFDEMPLTNTVSFVTLAQGFSRSHQFQRAR- 89
Query: 378 LLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMY 437
L + +EG + + LL +HAY+ ++G Q D + + L+D Y
Sbjct: 90 RLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFVGTALIDAY 149
Query: 438 SKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFV 497
S CGN+ A +F +D+V + M+ACYA + E ++LLF +M G +P+ T
Sbjct: 150 SVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFT-- 207
Query: 498 AILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA--CMIDLYGRANQLEKAIEFMKSI 555
I +A + C +E + + K+ + D Y +++LY ++ ++ +A +F + +
Sbjct: 208 -ISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEM 266
Query: 556 PTEE 559
P ++
Sbjct: 267 PKDD 270
>gi|297846530|ref|XP_002891146.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336988|gb|EFH67405.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 554
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 186/562 (33%), Positives = 295/562 (52%), Gaps = 47/562 (8%)
Query: 108 LKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLI 167
L LF E++ + + D FT+ L +L V G ++H + VKT ++ + +SL+
Sbjct: 15 LALFGELRG--QGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKTGLESDSYVCNSLM 72
Query: 168 DMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSW 227
MY+ G+ME+ K F PE D VSW
Sbjct: 73 GMYAAL--------------------------------GKMEITHKVFDEMPE-RDVVSW 99
Query: 228 NTLISGYVQNGDAEEGLKLFVRMG-ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVL 286
N LIS YV +G E+ + +F RM E+ ++ +E T S LSAC L+N++ + I+ +V+
Sbjct: 100 NGLISSYVGHGRFEDAISVFQRMSRESNLKADEGTIVSTLSACSVLKNLEIGERIYRYVV 159
Query: 287 KNGLISNPFVSSG--IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEA 344
+S V +G +VD++CKC ++ A ++ +N +SM+ GY G +EA
Sbjct: 160 TEFEMS---VRTGNALVDMFCKCGCLDKARAIFDSMRDKNVKCWTSMVSGYVSNGRTDEA 216
Query: 345 RRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACAL 404
R F+ K+VV+WTA+ +GYV+ + +L T + D +LV LL CA
Sbjct: 217 RELFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAR-IRPDNFVLVSLLTGCAQ 275
Query: 405 QAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVM 464
AL GK IH YI V +DK + + LVDMY+KCG + A +F ERD + +
Sbjct: 276 TGALEQGKWIHGYIRENRVTVDKVVGTALVDMYAKCGCIETALGVFYEMKERDTASWTSL 335
Query: 465 IACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYK 524
I A +G +A+ L+ EM G++ D +TFVA+L+A H G V G + F SMT +K
Sbjct: 336 IYGLATNGMSGRALDLYYEMENVGVRLDDITFVAVLTACSHGGFVAEGRRIFYSMTERHK 395
Query: 525 ISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILG---SFLNVCRLNRNAELAG 581
I P+++HY+C+IDL RA L++A E + + E D ++ S L+ R N ++A
Sbjct: 396 IQPKSEHYSCLIDLLCRAGLLDEAEELIDKMHGERDKTLVPVYCSLLSAARNYGNVKIAE 455
Query: 582 EAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEI 641
EKL ++E ++ + + LA+VYA+ W ++ +R++M+ + +F GCS + V+
Sbjct: 456 RVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEVDGVS 515
Query: 642 HIFTVGD--VSHPKTNAIYSVL 661
H F VG+ SHPK + I S+L
Sbjct: 516 HEFIVGNDPSSHPKMDEINSML 537
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 124/535 (23%), Positives = 227/535 (42%), Gaps = 102/535 (19%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A+K GL + N L+ +Y+ + + K+FDEMP
Sbjct: 53 HGYAVKTGLESDSYVCNSLMGMYAALGKMEITHKVFDEMP-------------------- 92
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+D+V++N ++ Y+ +E DA+ +F M S + +++ DE T+ STL
Sbjct: 93 -----------ERDVVSWNGLISSYVGHGRFE-DAISVFQRM-SRESNLKADEGTIVSTL 139
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C L N+ G +++ ++V T + S ++L+DM+ KC C ++A +F+ ++ N+
Sbjct: 140 SACSVLKNLEIGERIYRYVV-TEFEMSVRTGNALVDMFCKCGCLDKARAIFDSMRDK-NV 197
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+MV+ G + A + F R P + D V W +++GYVQ +E L+LF M
Sbjct: 198 KCWTSMVSGYVSNGRTDEARELFERSP-VKDVVLWTAMMNGYVQFNRFDEALELFRCMQT 256
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+R + S L+ C ++ K IH ++ +N + + V + +VD+Y KC
Sbjct: 257 ARIRPDNFVLVSLLTGCAQTGALEQGKWIHGYIRENRVTVDKVVGTALVDMYAKC----- 311
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G +E A F + E++ WT+L G
Sbjct: 312 --------------------------GCIETALGVFYEMKERDTASWTSLIYGLATNGMS 345
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI-HAYILRMGVQMDKKLIS 431
DL E + GV D + V +L AC+ + G+ I ++ R +Q + S
Sbjct: 346 GRALDLYYE-MENVGVRLDDITFVAVLTACSHGGFVAEGRRIFYSMTERHKIQPKSEHYS 404
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
L+D+ + G + AE + HG +K ++
Sbjct: 405 CLIDLLCRAGLLDEAEELIDKM-----------------HGERDKTLV------------ 435
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLE 546
+ ++LSA R+ G+V++ E+ + ++S + H + +Y AN+ E
Sbjct: 436 --PVYCSLLSAARNYGNVKIAERVAEKLEK-VEVSDSSAH-TLLASVYASANRWE 486
>gi|225433310|ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Vitis vinifera]
Length = 625
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 179/646 (27%), Positives = 331/646 (51%), Gaps = 82/646 (12%)
Query: 30 QLIHIYSKHNLLR-----ESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPH 84
Q +H H L+ SR L + + ++ + I + I H +R +FDS H
Sbjct: 28 QSLHFSVTHKSLKLTRQSHSRILSLGLSQNSLLATKLIFAYAICQHPY-HSRLVFDSLQH 86
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
K++ +NS++ GY Y +A +LF +M S+D + D+FT+++ + +L + G
Sbjct: 87 KNVFLWNSLINGYAKNRLYN-EAFQLFNQMCSSD--VLPDDFTLSTLSKVSSELGALFSG 143
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
+ +H ++ + +S++ MY KC +EE+ +VF+
Sbjct: 144 KSIHGKSIRIGFVSDTVVANSIMSMYCKCGNFEESRKVFD-------------------- 183
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA---EEGLKLFVRMGENGVRWNEHT 261
EM ++ ++ SWN LI+GY +G+ EE + +M + VR + +T
Sbjct: 184 ----EMTIR---------NSGSWNVLIAGYAVSGNCNFREETWEFVKQMQMDEVRPDAYT 230
Query: 262 FASALSACCGLRNV-KCAKEIHSWVLKN----GLISNPFVSSGIVDVYCKCENMNYAESM 316
+S L C G + +E+H +++KN GL S+ + ++D+Y +
Sbjct: 231 ISSLLPLCDGDKGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDMYSRS--------- 281
Query: 317 LLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALF 376
+ ++VG RR FD + +NV WTA+ +GYV+ + +
Sbjct: 282 ------------NKVVVG----------RRVFDRMKCRNVFSWTAMINGYVENGDSDEAL 319
Query: 377 DLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDM 436
L + +G+ + + LV +L AC+ + L G++IH + +R + + L + L+DM
Sbjct: 320 SLFRDMQVIDGIEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDM 379
Query: 437 YSKCGNMTYAEIIFQN-FIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVT 495
YSKCG++ A +F++ + +D + ++ MI+ Y HG ++AILL+++ML+ GI+PD +T
Sbjct: 380 YSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMIT 439
Query: 496 FVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSI 555
V ILSA G V G ++S+ DY I P + +AC++D+ GRA QL+ A++F+K++
Sbjct: 440 TVGILSACSRSGLVNEGLNIYSSVINDYGIEPTLEIFACIVDMLGRAGQLDPALDFIKAM 499
Query: 556 PTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMG 615
P E + G+ ++ ++ + E+ A L++LE N + YV ++N+YA+ W +
Sbjct: 500 PVEPGPSVWGALVSCSIIHGDLEMQELAYRFLIQLEPENPSNYVSISNLYASSRRWDAVA 559
Query: 616 RIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+R+ M+ + + GCSW+ + ++ H F V D +HP +IY++L
Sbjct: 560 EVRRMMKDKRLRKVPGCSWISINNKTHCFYVADKAHPSATSIYNML 605
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 114/483 (23%), Positives = 202/483 (41%), Gaps = 105/483 (21%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H ++I+ G T+ N ++ +Y K ESRK+FDEM RN SWN +I+ S +
Sbjct: 147 HGKSIRIGFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGN- 205
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
C + E +E F++ DE +R D +T++S L
Sbjct: 206 ----------------------CNF-REETWE------FVKQMQMDE-VRPDAYTISSLL 235
Query: 133 NLCV-KLLNVGFGRQLHAFMVKT----SNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
LC +GR+LH ++VK D+ LIDMYS+ RVF+
Sbjct: 236 PLCDGDKGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFDRMK 295
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
CR + SW +I+GYV+NGD++E L LF
Sbjct: 296 ---------------CR------------------NVFSWTAMINGYVENGDSDEALSLF 322
Query: 248 VRMGE-NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
M +G+ N + S L AC + ++IH + ++ L + + + ++D+Y K
Sbjct: 323 RDMQVIDGIEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSK 382
Query: 307 CENMNYAESMLLLKGV-RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
C +++ A + + +++ S SSMI GY L G +EA +D + +
Sbjct: 383 CGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQA----------- 431
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR-MGVQ 424
G+ D + V +L AC+ ++ G I++ ++ G++
Sbjct: 432 ---------------------GIRPDMITTVGILSACSRSGLVNEGLNIYSSVINDYGIE 470
Query: 425 MDKKLISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
++ + +VDM + G + A + I +E ++ +++C HG E L +
Sbjct: 471 PTLEIFACIVDMLGRAGQLDPALDFIKAMPVEPGPSVWGALVSCSIIHGDLEMQELAYRF 530
Query: 484 MLE 486
+++
Sbjct: 531 LIQ 533
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 190/676 (28%), Positives = 317/676 (46%), Gaps = 103/676 (15%)
Query: 26 ITTNQLIHIYSKH-NLLRESRKLFDEMPERNVFS--WNTIISACIKSHDLKQARS-LFDS 81
+ T H+ S++ NL + K P R S +N+++ C+ LKQ + L +
Sbjct: 2 LRTKASPHLISRYLNLQKPHSK---PNPNRQALSDKFNSLLQQCLSIKQLKQIHAQLLTN 58
Query: 82 SPHK---------DL------------------VTYNSMLCGYINAEGYEADALKLFIEM 114
S HK DL ++N M+ G A + AL+ + M
Sbjct: 59 SIHKPNSFLYKIADLKDFAYASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRM 118
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
+ ++ + T C LL V GR H +++ D G SLI MY++C
Sbjct: 119 KFLG--LKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCG 176
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
+A +VF+ +++ D VSWN++ISGY
Sbjct: 177 KMGDARKVFDEISQK---------------------------------DLVSWNSMISGY 203
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
+ A E + LF M E G + NE + S L AC L ++K + +V++N + N
Sbjct: 204 SKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNY 263
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
F+ S ++ +Y KC G++ ARR FDS+ +K
Sbjct: 264 FMGSALIHMYGKC-------------------------------GDLVSARRIFDSMKKK 292
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
+ V W A+ +GY + E L + + D + L+ +L ACA AL GK++
Sbjct: 293 DKVTWNAMITGYAQNGMSEEAIKLFQD-MRMSSTAPDQITLIGILSACASIGALDLGKQV 351
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
Y G Q D + + LVDMY+KCG++ A +F ++ V +N MI+ A HG
Sbjct: 352 EIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISALAFHGQA 411
Query: 475 EKAILLFEEMLEKG--IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
++A+ LF+ M+ +G + P+ +TFV +LSA H G V+ G + F+ M++ + + P+ +HY
Sbjct: 412 QEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHY 471
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
+CM+DL+ RA LE+A +F+ ++P + D VILG+ L C+ +N +++ + LL LE
Sbjct: 472 SCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELEP 531
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
+N YV + +YA W + R+R M+ ++ GCSW+ + ++H F GDV H
Sbjct: 532 SNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHQ 591
Query: 653 KTNAIYSVLAIFTGEL 668
+ I+ +L + +L
Sbjct: 592 EWIEIHQILDLLIDDL 607
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/468 (21%), Positives = 192/468 (41%), Gaps = 102/468 (21%)
Query: 4 LNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
L ++ + H I+ GL ++ LI +Y++ + ++RK+FDE+ ++++ SWN++I
Sbjct: 141 LAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMI 200
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
S Y+ M + +A+ LF EM A +
Sbjct: 201 SG------------------------YSKMR--------HAGEAVGLFREMMEAG--FQP 226
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
+E ++ S L C +L ++ G + F+V+ + F S+LI MY KC A R+F
Sbjct: 227 NEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIF 286
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
+ ++ + ++ NAM+ +GY QNG +EE
Sbjct: 287 DSMKKK-DKVTWNAMI--------------------------------TGYAQNGMSEEA 313
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
+KLF M + ++ T LSAC + + K++ + + G + +V + +VD+
Sbjct: 314 IKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDM 373
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y KC G+++ A R F + KN V W A+
Sbjct: 374 YAKC-------------------------------GSLDNAFRVFYGMPNKNEVSWNAMI 402
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVT-DALILVILLGACALQAALHPGKEI-HAYILRM 421
S + L + + G V+ + + V +L AC + G+ + H
Sbjct: 403 SALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSF 462
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER--DLVLYNVMIAC 467
G+ + S +VD++S+ G++ A E+ +++L ++ AC
Sbjct: 463 GLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGAC 510
>gi|356519999|ref|XP_003528655.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36980,
mitochondrial-like [Glycine max]
Length = 629
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 189/616 (30%), Positives = 315/616 (51%), Gaps = 22/616 (3%)
Query: 56 VFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQ 115
+F I A +S + AR LFD PHKD V +N+ML Y + Y+ +L LF M+
Sbjct: 5 LFRTTPKIVALARSGQISDARKLFDEIPHKDSVAWNAMLTAYSHVGLYQ-QSLSLFGCMR 63
Query: 116 SADEHIRMDEFTVTSTLNLCV--KLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKC 173
+ H + D F+ ++ LN C V FG LHA +V + +S +SLIDMY KC
Sbjct: 64 IS--HSKPDNFSFSAVLNACACAGASYVRFGATLHALVVVSGYLSSLPVANSLIDMYGKC 121
Query: 174 RCYEEACRVFEGCTE--EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLI 231
++A +VF+ ++ EV S A CR G +AL+ F PE ++WN +I
Sbjct: 122 LLPDDARKVFDETSDSNEVTWCSLMFAYANSCRLG---VALELFRSMPE-RVVIAWNIMI 177
Query: 232 SGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI 291
G+ + G+ E L LF M + + ++ TF++ ++AC + +H +V+K+G
Sbjct: 178 VGHARRGEVEACLHLFKEMCGSLCQPDQWTFSALINACAVSMEMLYGCMVHGFVIKSGWS 237
Query: 292 SNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL 351
S V + ++ Y K E + A + G N S +++I + G+ ++A F
Sbjct: 238 SAMEVKNSMLSFYAKLECQDDAMKVFNSFGCFNQVSWNAIIDAHMKLGDTQKAFLAFQKA 297
Query: 352 TEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG 411
E+N+V WT++ +GY + N E + + +T+ V D L+ +L ACA A L G
Sbjct: 298 PERNIVSWTSMIAGYTRNGNGELALSMFLD-LTRNSVQLDDLVAGAVLHACASLAILVHG 356
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
+ +H I+R G+ + ++LV+MY+KCG++ + + F + +++DL+ +N M+ + H
Sbjct: 357 RMVHGCIIRHGLDKYLYVGNSLVNMYAKCGDIKGSRLAFHDILDKDLISWNSMLFAFGLH 416
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH 531
G +AI L+ EM+ G+KPD VTF +L H G + G +F SM ++ +S DH
Sbjct: 417 GRANEAICLYREMVASGVKPDEVTFTGLLMTCSHLGLISEGFAFFQSMCLEFGLSHGMDH 476
Query: 532 YACMIDLYGRANQLEKAI----EFMKSIPTEEDA--VILGSFLNVCRLNRNAELAGEAEE 585
ACM+D+ GR + +A ++ K+ T ++ V+LG+ C + + E
Sbjct: 477 VACMVDMLGRGGYVAEARSLAEKYSKTSITRTNSCEVLLGA----CYAHGDLGTGSSVGE 532
Query: 586 KLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFT 645
L LE + YV L+N+Y A G W E +RK M + G SW+ + +E+ F
Sbjct: 533 YLKNLEPEKEVGYVLLSNLYCASGKWREAEMVRKAMLDQGVKKVPGSSWIEIRNEVTSFV 592
Query: 646 VGDVSHPKTNAIYSVL 661
G+ ++P I +L
Sbjct: 593 SGNNAYPYMADISKIL 608
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 118/466 (25%), Positives = 220/466 (47%), Gaps = 48/466 (10%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + +G + N LI +Y K L ++RK+FDE + N +W +++ A S L
Sbjct: 96 HALVVVSGYLSSLPVANSLIDMYGKCLLPDDARKVFDETSDSNEVTWCSLMFAYANSCRL 155
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
A LF S P + ++ +N M+ G+ EA L LF EM + D++T ++ +
Sbjct: 156 GVALELFRSMPERVVIAWNIMIVGHARRGEVEA-CLHLFKEM--CGSLCQPDQWTFSALI 212
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE--GCTEEV 190
N C + + +G +H F++K+ ++ +S++ Y+K C ++A +VF GC
Sbjct: 213 NACAVSMEMLYGCMVHGFVIKSGWSSAMEVKNSMLSFYAKLECQDDAMKVFNSFGC---F 269
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
N +S NA++ A + G+ + A F + PE N VSW ++I+GY +NG+ E L +F+ +
Sbjct: 270 NQVSWNAIIDAHMKLGDTQKAFLAFQKAPERN-IVSWTSMIAGYTRNGNGELALSMFLDL 328
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
N V+ ++ + L AC L + + +H ++++GL +V + +V++Y KC
Sbjct: 329 TRNSVQLDDLVAGAVLHACASLAILVHGRMVHGCIIRHGLDKYLYVGNSLVNMYAKC--- 385
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA-LFSGYVKA 369
G+++ +R F + +K+++ W + LF+ +
Sbjct: 386 ----------------------------GDIKGSRLAFHDILDKDLISWNSMLFAFGLHG 417
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG-KEIHAYILRMGVQMDKK 428
+ EA+ L E V GV D + LL C+ + G + L G+
Sbjct: 418 RANEAIC-LYREMVA-SGVKPDEVTFTGLLMTCSHLGLISEGFAFFQSMCLEFGLSHGMD 475
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYN----VMIACYAH 470
++ +VDM + G + A + + + + + N ++ ACYAH
Sbjct: 476 HVACMVDMLGRGGYVAEARSLAEKYSKTSITRTNSCEVLLGACYAH 521
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 119/267 (44%), Gaps = 36/267 (13%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTI 62
S+ + + H IK+G + N ++ Y+K ++ K+F+ N SWN I
Sbjct: 218 SMEMLYGCMVHGFVIKSGWSSAMEVKNSMLSFYAKLECQDDAMKVFNSFGCFNQVSWNAI 277
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
I A +K D ++A F +P +++V++ SM+ GY G AL +F+++ ++
Sbjct: 278 IDAHMKLGDTQKAFLAFQKAPERNIVSWTSMIAGYTR-NGNGELALSMFLDLTR--NSVQ 334
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
+D+ + L+ C L + GR +H +++ D + +SL++MY+KC + +
Sbjct: 335 LDDLVAGAVLHACASLAILVHGRMVHGCIIRHGLDKYLYVGNSLVNMYAKCGDIKGSRLA 394
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
F ++ D +SWN+++ + +G A E
Sbjct: 395 FHDILDK---------------------------------DLISWNSMLFAFGLHGRANE 421
Query: 243 GLKLFVRMGENGVRWNEHTFASALSAC 269
+ L+ M +GV+ +E TF L C
Sbjct: 422 AICLYREMVASGVKPDEVTFTGLLMTC 448
>gi|68611229|emb|CAE03043.3| OSJNBa0084A10.18 [Oryza sativa Japonica Group]
Length = 729
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 176/630 (27%), Positives = 307/630 (48%), Gaps = 63/630 (10%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
T N ++ ++ +L E+RK+FD MP RN SW +++ + + +AR LF+ P +
Sbjct: 66 FTWNCMVSGLIRNRMLAEARKVFDAMPVRNSVSWAALLTGYARCGRVAEARELFNRIPDR 125
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR 145
++V++N+M+ GY G A +LF D D+ + + ++ +K +V R
Sbjct: 126 NVVSWNAMVSGYAR-NGMVKRARELF------DMMPWRDDVSWLTMISGYIKRKHVREAR 178
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
+L M +S +++ Y A V G + N +S N M+ R
Sbjct: 179 ELFDSMPSPPTSVCNALLSGYVEL-----GYMRAAEVLFGQMQTRNPVSWNVMITGYARA 233
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG-ENGVRWNEHTFAS 264
G M +A + F PE D +S ++ GY+QNG + K+F M + V WN
Sbjct: 234 GSMGIAQRLFDEMPE-KDVLSRTAIMRGYLQNGSVDAAWKVFKDMPHRDTVAWNT----- 287
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
++D + + + ++ A + R+
Sbjct: 288 -----------------------------------MMDGFVRNDRLDDALKLFSEMPDRD 312
Query: 325 SFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVT 384
S ++++ GY QG+M+ A F K+ + W L SGY E LLSE +
Sbjct: 313 QISWNAILQGYVQQGDMDSANAWFRRAPNKDAISWNTLISGYKD----EGALSLLSEMI- 367
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
+ G+ D L +++ CA +L GK +H + ++ G + D ++S+L+ MYSKCG ++
Sbjct: 368 RGGLKPDQATLSVVISICASLVSLGCGKMVHLWAIKTGFEHDALVMSSLISMYSKCGLIS 427
Query: 445 YAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR 504
A +F+ ++RD V +N MIA YA+HG ++A+ +F+ M + G +PD TF++ILSA
Sbjct: 428 EASQVFELILQRDTVTWNAMIATYAYHGLADEALKVFDMMTKAGFRPDHATFLSILSACA 487
Query: 505 HCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVIL 564
H G + G +F SM D+ + P +DHY+CM+DL GR+ + +A +F + IP++
Sbjct: 488 HKGYLYEGCYHFRSMQEDWNLVPRSDHYSCMVDLLGRSGFIHQAYDFTRRIPSDHRTTAW 547
Query: 565 GSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQM--R 622
+ +VC + +L +L+ ++ Y L+N+YAA+ W+ +R M R
Sbjct: 548 ETLFSVCNSHGEIQLGEIIARNVLKARPSDGGMYTLLSNIYAAKEMWSSAASVRGFMKER 607
Query: 623 GMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
G+K + GCSW+ ++ E+ F+ D +HP
Sbjct: 608 GLK--KETGCSWIELKGEVVTFSSNDSNHP 635
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 153/330 (46%), Gaps = 48/330 (14%)
Query: 24 TTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP 83
T N L+ Y + +R + LF +M RN SWN +I+ ++ + A+ LFD P
Sbjct: 188 PTSVCNALLSGYVELGYMRAAEVLFGQMQTRNPVSWNVMITGYARAGSMGIAQRLFDEMP 247
Query: 84 HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGF 143
KD+++ +++ GY+ +A A K+F +M D
Sbjct: 248 EKDVLSRTAIMRGYLQNGSVDA-AWKVFKDMPHRDT------------------------ 282
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
A ++++D + + ++A ++F + + IS NA++
Sbjct: 283 -----------------VAWNTMMDGFVRNDRLDDALKLFSEMPDR-DQISWNAILQGYV 324
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
++G+M+ A F R P DA+SWNTLISGY G L L M G++ ++ T +
Sbjct: 325 QQGDMDSANAWFRRAPN-KDAISWNTLISGYKDEG----ALSLLSEMIRGGLKPDQATLS 379
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
+S C L ++ C K +H W +K G + V S ++ +Y KC ++ A + L R
Sbjct: 380 VVISICASLVSLGCGKMVHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQVFELILQR 439
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
++ + ++MI Y+ G +EA + FD +T+
Sbjct: 440 DTVTWNAMIATYAYHGLADEALKVFDMMTK 469
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 127/246 (51%), Gaps = 40/246 (16%)
Query: 25 TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPH 84
T+ N ++ + +++ L ++ KLF EMP+R+ SWN I+ ++ D+ A + F +P+
Sbjct: 282 TVAWNTMMDGFVRNDRLDDALKLFSEMPDRDQISWNAILQGYVQQGDMDSANAWFRRAPN 341
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
KD +++N+++ GY + EG AL L EM ++ D+ T++ +++C L+++G G
Sbjct: 342 KDAISWNTLISGYKD-EG----ALSLLSEMIRGG--LKPDQATLSVVISICASLVSLGCG 394
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
+ +H + +KT + +SSLI MYSKC EA +VFE + + ++ NAM+A
Sbjct: 395 KMVHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQVFELILQR-DTVTWNAMIAT--- 450
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFAS 264
Y +G A+E LK+F M + G R + TF S
Sbjct: 451 -----------------------------YAYHGLADEALKVFDMMTKAGFRPDHATFLS 481
Query: 265 ALSACC 270
LSAC
Sbjct: 482 ILSACA 487
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 103/267 (38%), Gaps = 66/267 (24%)
Query: 348 FDSLTEKNV-------------------------------VVWTALFSGYVKAQNCEALF 376
FD ++E+NV V W AL +GY +
Sbjct: 57 FDEMSERNVFTWNCMVSGLIRNRMLAEARKVFDAMPVRNSVSWAALLTGYARCGRVAEAR 116
Query: 377 DLLSEFVTKEGVVTDALILVILLGACALQAA----LHPGKE-------IHAYILRMGVQM 425
+L + + V +A++ +A + P ++ I YI R V+
Sbjct: 117 ELFNRIPDRNVVSWNAMVSGYARNGMVKRARELFDMMPWRDDVSWLTMISGYIKRKHVRE 176
Query: 426 DKKLIST-----------LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
++L + L+ Y + G M AE++F R+ V +NVMI YA G
Sbjct: 177 ARELFDSMPSPPTSVCNALLSGYVELGYMRAAEVLFGQMQTRNPVSWNVMITGYARAGSM 236
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA- 533
A LF+EM EK D ++ AI+ + GSV+ K F M P D A
Sbjct: 237 GIAQRLFDEMPEK----DVLSRTAIMRGYLQNGSVDAAWKVFKDM-------PHRDTVAW 285
Query: 534 -CMIDLYGRANQLEKAIEFMKSIPTEE 559
M+D + R ++L+ A++ +P +
Sbjct: 286 NTMMDGFVRNDRLDDALKLFSEMPDRD 312
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 18/175 (10%)
Query: 11 ICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSH 70
+ H+ AIK G + + LI +YSK L+ E+ ++F+ + +R+ +WN +I+
Sbjct: 396 MVHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQVFELILQRDTVTWNAMIATYAYHG 455
Query: 71 DLKQARSLFD----SSPHKDLVTYNSML--CGYINAEGYEADALKLFIEMQSADEHI-RM 123
+A +FD + D T+ S+L C + +GY + F MQ + R
Sbjct: 456 LADEALKVFDMMTKAGFRPDHATFLSILSACAH---KGYLYEGCYHFRSMQEDWNLVPRS 512
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEE 178
D ++ L L GF Q + F + +D A +L +S C + E
Sbjct: 513 DHYSCMVDL-----LGRSGFIHQAYDFTRRIPSDHRTTAWETL---FSVCNSHGE 559
>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53360, mitochondrial; Flags: Precursor
gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 192/729 (26%), Positives = 327/729 (44%), Gaps = 136/729 (18%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNV------ 56
S +L + H + + TI N ++ +Y K LR++R++FD MPERN+
Sbjct: 80 SRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSV 139
Query: 57 -----------------------------FSWNTIISACIKSHD---------------- 71
F++ +II AC S D
Sbjct: 140 ITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLES 199
Query: 72 -------------------LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
+ A +F P KDL++++S++ G+ + G+E +AL
Sbjct: 200 SSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGF-SQLGFEFEALSHLK 258
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
EM S +E+ S+L C LL +G Q+H +K+ + A SL DMY++
Sbjct: 259 EMLSFGV-FHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYAR 317
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C A RVF+ Q E D SWN +I+
Sbjct: 318 CGFLNSARRVFD---------------------------------QIERPDTASWNVIIA 344
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
G NG A+E + +F +M +G + + S L A + +IHS+++K G ++
Sbjct: 345 GLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLA 404
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
+ V + ++ +Y C ++ Y E+ R + DS
Sbjct: 405 DLTVCNSLLTMYTFCSDL------------------------YCCFNLFEDFRNNADS-- 438
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
V W + + ++ + + L + E D + + LL C ++L G
Sbjct: 439 ----VSWNTILTACLQHEQPVEMLRLFKLMLVSE-CEPDHITMGNLLRGCVEISSLKLGS 493
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
++H Y L+ G+ ++ + + L+DMY+KCG++ A IF + RD+V ++ +I YA G
Sbjct: 494 QVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSG 553
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
E+A++LF+EM GI+P+ VTFV +L+A H G VE G K + +M ++ ISP +H
Sbjct: 554 FGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHC 613
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
+C++DL RA +L +A F+ + E D V+ + L+ C+ N LA +A E +L+++
Sbjct: 614 SCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDP 673
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
N +V L +++A+ GNW +R M+ + G SW+ +E +IHIF D+ HP
Sbjct: 674 FNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHP 733
Query: 653 KTNAIYSVL 661
+ + IY+VL
Sbjct: 734 ERDDIYTVL 742
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 83/164 (50%), Gaps = 1/164 (0%)
Query: 396 VILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIE 455
+ L+ AC+ +L G++IH +IL + D L + ++ MY KCG++ A +F E
Sbjct: 71 ISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPE 130
Query: 456 RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKY 515
R+LV Y +I Y+ +G +AI L+ +ML++ + PD F +I+ A V +G K
Sbjct: 131 RNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLG-KQ 189
Query: 516 FNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE 559
++ + S +I +Y R NQ+ A IP ++
Sbjct: 190 LHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKD 233
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 109/243 (44%), Gaps = 33/243 (13%)
Query: 261 TFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLK 320
T+ S + AC R++ ++IH +L + + +++ I+ +Y KC ++ A +
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 321 GVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLS 380
RN S +S+I GYS G EA R Y+K
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRL------------------YLK------------ 158
Query: 381 EFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC 440
+ +E +V D ++ ACA + + GK++HA ++++ + L+ MY +
Sbjct: 159 --MLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRF 216
Query: 441 GNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI-KPDAVTFVAI 499
M+ A +F +DL+ ++ +IA ++ G E +A+ +EML G+ P+ F +
Sbjct: 217 NQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSS 276
Query: 500 LSA 502
L A
Sbjct: 277 LKA 279
>gi|242096978|ref|XP_002438979.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
gi|241917202|gb|EER90346.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
Length = 723
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 183/604 (30%), Positives = 305/604 (50%), Gaps = 7/604 (1%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N++ + L+ SLFD PH +++ L + A AD + I +
Sbjct: 39 NSLTNCLSAPRHLRYVLSLFDRLPHPTTFLHDTALRACLQASA-GADH-PVLILRRMRRG 96
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTS-NDASGFAVSSLIDMYSKCRCYEE 178
+RM FT C G R LHA ++T A+ + LI MY+ ++
Sbjct: 97 GVRMSAFTFHFVFRCCAAGAGAGLCRMLHAACLRTMLPSAARIVANPLIHMYASLGLTDD 156
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
A R F+ + + + ++ R G ++ A + + PE N VSW +LI+GY + G
Sbjct: 157 ARRAFDEVPVK-DAVVWATVIGGLVRWGLLDEARRLLVQAPERN-VVSWTSLIAGYSRAG 214
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
+ + F M +GV +E ALSAC L+N++ + +H V K + +
Sbjct: 215 RPADAVYCFNCMLSDGVEPDEVAVIGALSACSKLKNLEFGRLLHLLVGKKRIQMTDKLVV 274
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIV-GYSLQGNMEEARRHFDSLTEKNVV 357
++D+Y KC ++ A+++ G ++I+ GY G+++ AR FD + ++V+
Sbjct: 275 TLIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNVIIDGYCKLGHVDIARSLFDQMGARDVI 334
Query: 358 VWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
+ ++ +GY+ + L + + G+ D +V LL ACA AL G+ +HA
Sbjct: 335 TFNSMITGYIHSGRLRDALQLFMQL-RRHGMRADNFTVVSLLTACASLGALPQGRALHAS 393
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
I + V+ D L++ LVDMY KCG + A +F ERD+ ++ MIA A +G A
Sbjct: 394 IEQRIVEEDVYLVTALVDMYMKCGRVDEATAVFHRMGERDVHTWSAMIAGLAFNGMGMDA 453
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID 537
+ F +M G +P +VT++A+L+A H + G ++FN M + +K+ P+ +HY CMID
Sbjct: 454 LESFCQMKRDGFQPTSVTYIAVLTACSHSSLLNEGRQHFNEMRSLHKLHPQIEHYGCMID 513
Query: 538 LYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKAR 597
L R+ L++A+ ++++P + +AVI S L+ CR+++N +LA A E LL+L A
Sbjct: 514 LLARSGLLDEAMHLVQTMPMQPNAVIWASILSACRVHKNIDLARHAAEHLLKLAPEEDAV 573
Query: 598 YVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
YVQL N+Y W E RIR M + AG S + V ++H F V D SHP T I
Sbjct: 574 YVQLYNIYIDSRQWVEAKRIRMLMEEQGVKKTAGYSSITVAGQVHKFVVNDQSHPWTLEI 633
Query: 658 YSVL 661
+++
Sbjct: 634 ITMM 637
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 126/514 (24%), Positives = 240/514 (46%), Gaps = 74/514 (14%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
I N LIH+Y+ L ++R+ FDE+P ++ W T+I ++ L +AR L +P +
Sbjct: 139 IVANPLIHMYASLGLTDDARRAFDEVPVKDAVVWATVIGGLVRWGLLDEARRLLVQAPER 198
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR 145
++V++ S++ GY A G ADA+ F M S + + DE V L+ C KL N+ FGR
Sbjct: 199 NVVSWTSLIAGYSRA-GRPADAVYCFNCMLS--DGVEPDEVAVIGALSACSKLKNLEFGR 255
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
LH + K + V +LIDMY+KC +A VF+ N ++ C+
Sbjct: 256 LLHLLVGKKRIQMTDKLVVTLIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNVIIDGYCKL 315
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASA 265
G +++A ++ + Q D +++N++I+GY+ +G + L+LF+++ +G+R + T S
Sbjct: 316 GHVDIA-RSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQLRRHGMRADNFTVVSL 374
Query: 266 LSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNS 325
L+AC L + + +H+ + + + + ++ + +VD+Y KC ++ A ++ G R+
Sbjct: 375 LTACASLGALPQGRALHASIEQRIVEEDVYLVTALVDMYMKCGRVDEATAVFHRMGERDV 434
Query: 326 FSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTK 385
+ S+MI G + G +A F C+ + +
Sbjct: 435 HTWSAMIAGLAFNGMGMDALESF-----------------------CQ---------MKR 462
Query: 386 EGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTY 445
+G ++ + +L AC+ + L+ G++ +
Sbjct: 463 DGFQPTSVTYIAVLTACSHSSLLNEGRQ------------------------------HF 492
Query: 446 AEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRH 505
E+ + + + Y MI A G ++A+ L + M ++P+AV + +ILSA R
Sbjct: 493 NEMRSLHKLHPQIEHYGCMIDLLARSGLLDEAMHLVQTM---PMQPNAVIWASILSACRV 549
Query: 506 CGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
++++ + K++PE D A + LY
Sbjct: 550 HKNIDLARHAAEHL---LKLAPEED--AVYVQLY 578
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 173/385 (44%), Gaps = 66/385 (17%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFD-----EMPERNVFSW 59
NL+ + H+ K + +T LI +Y+K + +++ +FD + PE W
Sbjct: 250 NLEFGRLLHLLVGKKRIQMTDKLVVTLIDMYAKCGDIAQAQAVFDAVGRGQKPE----PW 305
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N II K + ARSLFD +D++T+NSM+ GYI++ G DAL+LF++++
Sbjct: 306 NVIIDGYCKLGHVDIARSLFDQMGARDVITFNSMITGYIHS-GRLRDALQLFMQLRR--H 362
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
+R D FTV S L C L + GR LHA + + + + V++L+DMY KC +EA
Sbjct: 363 GMRADNFTVVSLLTACASLGALPQGRALHASIEQRIVEEDVYLVTALVDMYMKCGRVDEA 422
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
VF R GE D +W+ +I+G NG
Sbjct: 423 TAVFH-------------------RMGE--------------RDVHTWSAMIAGLAFNGM 449
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACC----------GLRNVKCAKEIHSWVLKNG 289
+ L+ F +M +G + T+ + L+AC ++ ++H + G
Sbjct: 450 GMDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLLNEGRQHFNEMRSLHKLHPQIEHYG 509
Query: 290 LISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARR--- 346
+ + SG++D E M+ ++M + N+ +S++ + N++ AR
Sbjct: 510 CMIDLLARSGLLD-----EAMHLVQTMPMQP---NAVIWASILSACRVHKNIDLARHAAE 561
Query: 347 HFDSLTEKNVVVWTALFSGYVKAQN 371
H L + V+ L++ Y+ ++
Sbjct: 562 HLLKLAPEEDAVYVQLYNIYIDSRQ 586
>gi|359476084|ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Vitis vinifera]
Length = 541
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 168/481 (34%), Positives = 261/481 (54%), Gaps = 13/481 (2%)
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM- 250
L++K MV C E E A F R + N A +N +I Y N + ++ +M
Sbjct: 48 LVTK--MVDVCNHHAETEYANLLFKRVADPN-AFLYNAMIRAYKHNKVYVLAITVYKQML 104
Query: 251 ----GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
GEN + ++ TF + +C GL K++H V K G SN V + +V++Y K
Sbjct: 105 GHSHGENPIFPDKFTFPFVVKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVK 164
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
C++++ A + R++ S +++I G+ G M AR F+ + +K + WTA+ SGY
Sbjct: 165 CDSLDDAHKVFEEMTERDAVSWNTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGY 224
Query: 367 VKAQNCEALFDLLSEFVTKE--GVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
+ C A D L F + G+ D + LV +L ACA AL GK IH Y + G
Sbjct: 225 ARI-GCYA--DALEFFRRMQMVGIEPDEISLVSVLPACAQLGALELGKWIHFYADKAGFL 281
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
+ + + L++MY+KCG++ +F ERD++ ++ MI A+HG +AI LF+EM
Sbjct: 282 RNICVCNALIEMYAKCGSIDEGRRLFDQMNERDVISWSTMIVGLANHGRAHEAIELFQEM 341
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
+ I+P+ +TFV +LSA H G + G +YF SM DY I P +HY C+++L G + +
Sbjct: 342 QKAKIEPNIITFVGLLSACAHAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGR 401
Query: 545 LEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANV 604
L++A+E +K +P + D+ I GS L+ CR + N E+A A E LL LE + YV L+N+
Sbjct: 402 LDQALELIKKMPMKPDSAIWGSLLSSCRSHSNLEIAVIAMEHLLELEPADTGNYVLLSNL 461
Query: 605 YAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIF 664
YA G W + R+RK MR + GCS + V++ + F GD S P + AIY VL +
Sbjct: 462 YADLGKWDGVSRMRKLMRSKSMKKTPGCSSIEVDNMVQEFASGDDSKPFSKAIYRVLKLL 521
Query: 665 T 665
Sbjct: 522 V 522
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 192/437 (43%), Gaps = 44/437 (10%)
Query: 57 FSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM-- 114
F ++ C + + A LF + YN+M+ Y + + Y A+ ++ +M
Sbjct: 47 FLVTKMVDVCNHHAETEYANLLFKRVADPNAFLYNAMIRAYKHNKVY-VLAITVYKQMLG 105
Query: 115 -QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKC 173
+ I D+FT + C L+ G+Q+H + K ++ +SL++MY KC
Sbjct: 106 HSHGENPIFPDKFTFPFVVKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKC 165
Query: 174 RCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAV--SWNTLI 231
++A +VFE TE + +S N +++ R G+M A F E+ D SW ++
Sbjct: 166 DSLDDAHKVFEEMTER-DAVSWNTLISGHVRLGQMRRARAIF---EEMQDKTIFSWTAIV 221
Query: 232 SGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI 291
SGY + G + L+ F RM G+ +E + S L AC L ++ K IH + K G +
Sbjct: 222 SGYARIGCYADALEFFRRMQMVGIEPDEISLVSVLPACAQLGALELGKWIHFYADKAGFL 281
Query: 292 SNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL 351
N V + ++++Y KC G+++E RR FD +
Sbjct: 282 RNICVCNALIEMYAKC-------------------------------GSIDEGRRLFDQM 310
Query: 352 TEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG 411
E++V+ W+ + G +L E + K + + + V LL ACA L+ G
Sbjct: 311 NERDVISWSTMIVGLANHGRAHEAIELFQE-MQKAKIEPNIITFVGLLSACAHAGLLNEG 369
Query: 412 KEIHAYILR-MGVQMDKKLISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMIACYA 469
+ R ++ + LV++ G + A E+I + ++ D ++ +++
Sbjct: 370 LRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSAIWGSLLSSCR 429
Query: 470 HHGHEEKAILLFEEMLE 486
H + E A++ E +LE
Sbjct: 430 SHSNLEIAVIAMEHLLE 446
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 127/269 (47%), Gaps = 48/269 (17%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H K G T+ N L+ +Y K + L ++ K+F+EM ER+ SWNT+IS ++ +
Sbjct: 140 HGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHKVFEEMTERDAVSWNTLISGHVRLGQM 199
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
++AR++F+ K + ++ +++ GY Y ADAL+ F MQ I DE ++ S L
Sbjct: 200 RRARAIFEEMQDKTIFSWTAIVSGYARIGCY-ADALEFFRRMQMVG--IEPDEISLVSVL 256
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGF-----AVSSLIDMYSKCRCYEEACRVFEGCT 187
C +L + G+ +H + D +GF ++LI+MY+KC +E R+F+
Sbjct: 257 PACAQLGALELGKWIHFYA-----DKAGFLRNICVCNALIEMYAKCGSIDEGRRLFDQMN 311
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
E D +SW+T+I G +G A E ++LF
Sbjct: 312 ER---------------------------------DVISWSTMIVGLANHGRAHEAIELF 338
Query: 248 VRMGENGVRWNEHTFASALSAC--CGLRN 274
M + + N TF LSAC GL N
Sbjct: 339 QEMQKAKIEPNIITFVGLLSACAHAGLLN 367
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 99/206 (48%), Gaps = 18/206 (8%)
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF 453
I V +L C L K+IHA+I++ + L++ +VD+ + YA ++F+
Sbjct: 16 IFVPILKNCPNIVEL---KKIHAHIVKFSLSQSSFLVTKMVDVCNHHAETEYANLLFKRV 72
Query: 454 IERDLVLYNVMIACYAHHGHEEKAILLFEEML-----EKGIKPDAVTFVAILSAFRHCGS 508
+ + LYN MI Y H+ AI ++++ML E I PD TF ++ +
Sbjct: 73 ADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGHSHGENPIFPDKFTFPFVVKSCAGLMC 132
Query: 509 VEMGEKYFNSMTADYKISPETDHYA--CMIDLYGRANQLEKAIEFMKSIPTEEDAV---- 562
++G++ + +K +++ ++++Y + + L+ A + + + TE DAV
Sbjct: 133 YDLGKQVHGHV---FKFGQKSNTVVENSLVEMYVKCDSLDDAHKVFEEM-TERDAVSWNT 188
Query: 563 ILGSFLNVCRLNRNAELAGEAEEKLL 588
++ + + ++ R + E ++K +
Sbjct: 189 LISGHVRLGQMRRARAIFEEMQDKTI 214
>gi|242092520|ref|XP_002436750.1| hypothetical protein SORBIDRAFT_10g008110 [Sorghum bicolor]
gi|241914973|gb|EER88117.1| hypothetical protein SORBIDRAFT_10g008110 [Sorghum bicolor]
Length = 672
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 192/712 (26%), Positives = 332/712 (46%), Gaps = 111/712 (15%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHN-----LLRE-----SRKLFDEMPERNVF 57
A + H +A + +Q + +HN LLR +R+LFD +P R+V
Sbjct: 9 PAAVAHRRAGAPATPDVAVAMDQADSLVRQHNRSLMGLLRRGRFSAARRLFDALPARSVV 68
Query: 58 SWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINA--EGYEADALKLFIEMQ 115
+WN+ ++A + D++ ARS FD+ P +D++++N++L Y + + A A +LF EM
Sbjct: 69 TWNSFLAALSRRRDVRAARSFFDAMPMRDIISWNTLLAAYARSLQPDHLAAARRLFDEMP 128
Query: 116 SADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRC 175
D + S+L+ Y++
Sbjct: 129 QRD-----------------------------------------AVSWSTLLGAYTRRGL 147
Query: 176 YEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYV 235
EEA R+F+ N S N MV G+M AL F P + D+ S + ++SG++
Sbjct: 148 MEEAQRLFDEMPHR-NPASWNTMVTGFFAIGQMRKALNVFEAMP-VKDSASLSAMVSGFI 205
Query: 236 QNGDAEEGLKLFVRM--------------------GENGVRWNEHTFASAL----SACCG 271
+NG E +L + G+ G + S + S G
Sbjct: 206 RNGWLHEADELLTKRLRAMDMDKAVDAFNTLIAAYGQTGRVTDARRLFSMIPKTQSQHKG 265
Query: 272 LRNVKCAKEIHSW------VLKNGLISN--------PFVS----SGIVDVYCKCENMNYA 313
+ + + SW ++ G + + PF + ++ Y + +M A
Sbjct: 266 HKRRVFERNVVSWNSMMMCYIRTGDVCSARALFDEMPFKDLVTWNTMIAGYTQASDMEEA 325
Query: 314 ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE 373
E + ++ + + MI G++ +G++E AR FD + E++ + W + SGY + ++ +
Sbjct: 326 EKLFGEVPAPDAVTWNLMIRGFTQKGDVEHARGFFDRMPEQSTITWNTMISGYEQNEDYD 385
Query: 374 ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL 433
L +L ++L ACA A L G ++H I + + D + L
Sbjct: 386 CTIKLFQR------------MLEVVLAACASLAMLRLGAQLHQLIEKSFLP-DTATNNAL 432
Query: 434 VDMYSKCGNMTYAEIIF-QNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
+ MYS+CG +T A+ IF Q ++DLV +N +I Y HHG+ +A+ LF+EM + P
Sbjct: 433 MTMYSRCGELTSAKAIFSQMHTQKDLVSWNALIGGYEHHGNATEALRLFQEMRSAKVMPT 492
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
+TF+++LSA + G V G+ F++M +Y ++P +HYA +++L GR QLE A+E +
Sbjct: 493 HITFISLLSACGNAGLVSEGQVVFHTMVHEYGLAPRVEHYAALVNLIGRHGQLEDALEVI 552
Query: 553 KSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWA 612
KS+P D + G+FL C +N LA A L +++ + A YV + N++A EG W
Sbjct: 553 KSMPIAPDRAVWGAFLGACTAKKNEVLAAVAANALSKIDPESSAPYVLMHNLHAHEGRWG 612
Query: 613 EMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIF 664
+R+ M + ++ G SW+ + ++H+F GD SHP T I+SVL F
Sbjct: 613 SASVVREDMERLGIHKHPGYSWIDLHDKVHVFISGDTSHPLTQEIFSVLECF 664
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 168/555 (30%), Positives = 275/555 (49%), Gaps = 39/555 (7%)
Query: 111 FIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMY 170
FI ++ E+ + S L+ C + +Q+HA +++ + ++ LI M
Sbjct: 28 FIPFPQLQHQRKLLEWRLMSILHDCTLFSQI---KQVHAHIIRNGLSQCSYVLTKLIRML 84
Query: 171 SKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTL 230
+K +V + S +V + Q + W +
Sbjct: 85 TKV---------------DVPMGSYPLLV----------------FGQVNYPNPFLWTAM 113
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSW-VLKNG 289
I GY G E + RM +GV TF++ AC N+ K++H+ +L G
Sbjct: 114 IRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGG 173
Query: 290 LISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFD 349
S+ +V + ++D+Y KC + A + R+ S + +IV Y+ G+ME A FD
Sbjct: 174 FASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFD 233
Query: 350 SLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALH 409
L K++V WTA+ +GY + + + + + G+ TD + L ++ ACA A+
Sbjct: 234 DLPSKDMVAWTAMVTGYAQNGRPKEALEYFQK-MQDVGMETDEVTLAGVISACAQLGAVK 292
Query: 410 PGKEIHAYILRMGVQMDKKLI--STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIAC 467
I R G ++ S L+DMYSKCG+ A +F+ ER++ Y+ MI
Sbjct: 293 HANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILG 352
Query: 468 YAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISP 527
YA HG A+ LF +ML+ I+P+ VTF+ ILSA H G VE G + F M + ++P
Sbjct: 353 YAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAP 412
Query: 528 ETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKL 587
DHYACM+DL GRA LE+A++ +K++P E + + G+ L CR++ N ++A A +L
Sbjct: 413 SPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANEL 472
Query: 588 LRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEH-EIHIFTV 646
+LE N Y+ L+N+YA+ G W E+ ++RK +R + GCSW ++ EIH F
Sbjct: 473 FKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFA 532
Query: 647 GDVSHPKTNAIYSVL 661
GD +HP+++ I L
Sbjct: 533 GDTTHPRSSEIRQAL 547
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 198/434 (45%), Gaps = 34/434 (7%)
Query: 78 LFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVK 137
+F + + + +M+ GY +G +++ + M+ + + FT ++ C
Sbjct: 98 VFGQVNYPNPFLWTAMIRGYA-LQGLLSESTNFYTRMRR--DGVGPVSFTFSALFKACGA 154
Query: 138 LLNVGFGRQLHAFMVKTSNDASGFAV-SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKN 196
LN+ G+Q+HA + AS V +S+ID+Y KC A +VF+ +E +++S
Sbjct: 155 ALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSER-DVVSWT 213
Query: 197 AMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVR 256
++ A + G+ME A F P D V+W +++GY QNG +E L+ F +M + G+
Sbjct: 214 ELIVAYAKYGDMESASGLFDDLPS-KDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGME 272
Query: 257 WNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL--ISNPFVSSGIVDVYCKCENMNYAE 314
+E T A +SAC L VK A I ++G N V S ++D+Y KC + + A
Sbjct: 273 TDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAY 332
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA----- 369
+ + RN FS SSMI+GY++ G A + F + + + F G + A
Sbjct: 333 KVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAG 392
Query: 370 --QNCEALFDLLSEFVTKEGVVTDALILVILLG-ACALQAALHPGKEIHAYILRMGVQMD 426
+ LF + +F +V LLG A L+ AL + M ++ +
Sbjct: 393 LVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALD-------LVKTMPMEPN 445
Query: 427 KKLISTLVDMYSKCGNMTYAEI----IFQ---NFIERDLVLYNVMIACYAHHGHEEKAIL 479
+ L+ GN A+I +F+ N I ++L N+ YA G E+
Sbjct: 446 GGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNI----YASAGRWEEVSK 501
Query: 480 LFEEMLEKGIKPDA 493
L + + EKG K +
Sbjct: 502 LRKVIREKGFKKNP 515
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 128/275 (46%), Gaps = 49/275 (17%)
Query: 3 SLNLKEALICHVQAIK-AGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
+LN+ H Q I G N +I +Y K L +RK+FDEM ER+V SW
Sbjct: 155 ALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTE 214
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I A K D++ A LFD P KD+V + +M+ GY G +AL+ F +MQ D +
Sbjct: 215 LIVAYAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQ-NGRPKEALEYFQKMQ--DVGM 271
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV-------SSLIDMYSKCR 174
DE T+ ++ C +L G HA ++ + SGF S+LIDMYSKC
Sbjct: 272 ETDEVTLAGVISACAQL-----GAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCG 326
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
+EA +VFE +E N+ S ++++I GY
Sbjct: 327 SPDEAYKVFE-VMKERNVFS--------------------------------YSSMILGY 353
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
+G A L+LF M + +R N+ TF LSAC
Sbjct: 354 AMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSAC 388
>gi|147765322|emb|CAN64903.1| hypothetical protein VITISV_019802 [Vitis vinifera]
Length = 625
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 179/645 (27%), Positives = 331/645 (51%), Gaps = 80/645 (12%)
Query: 30 QLIHIYSKHNLLRESR----KLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
Q +H H L+ +R ++ +N F +I A +R +FDS HK
Sbjct: 28 QSLHFSVTHKSLKLTRQSHSRILSLGLSQNSFLATKLIFAYAICQHPYHSRLVFDSLQHK 87
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR 145
++ +NS++ G + Y +A +LF +M S+D + D+FT+++ + +L + G+
Sbjct: 88 NVFLWNSLINGCVKNRLYN-EAFQLFNQMCSSD--VLPDDFTLSTLSKVSSELGALFSGK 144
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
+H ++T + +S++ MY KC ++E+ +VF+
Sbjct: 145 SIHGKSIRTGFVSDTVVANSIMSMYCKCGNFDESRKVFD--------------------- 183
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA---EEGLKLFVRMGENGVRWNEHTF 262
EM ++ ++ SWN LI+GY +G+ EE + +M + VR + +T
Sbjct: 184 ---EMTIR---------NSGSWNVLIAGYAVSGNCNFREETWEFVKQMQMDEVRPDAYTI 231
Query: 263 ASALSACCG-LRNVKCAKEIHSWVLKN----GLISNPFVSSGIVDVYCKCENMNYAESML 317
+S L C G + +E+H +++KN GL S+ + ++D+Y +
Sbjct: 232 SSLLPLCDGDMGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDMYSRS---------- 281
Query: 318 LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFD 377
+ ++VG RR FD + +NV WTA+ +GYV+ + +
Sbjct: 282 -----------NKVVVG----------RRVFDRMKCRNVFSWTAMINGYVENGDSDEALS 320
Query: 378 LLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMY 437
L + +GV + + LV +L AC+ + L G++IH + +R + + L + L+DMY
Sbjct: 321 LFRDMQVIDGVEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMY 380
Query: 438 SKCGNMTYAEIIFQN-FIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTF 496
SKCG++ A +F++ + +D + ++ MI+ Y HG ++AILL+++ML+ GI+PD +T
Sbjct: 381 SKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITT 440
Query: 497 VAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIP 556
V ILSA G V G ++S+ DY I P + AC++D+ GRA QL++A++F+K+IP
Sbjct: 441 VGILSACGRSGLVNEGLNIYSSVINDYGIEPTLEICACIVDMLGRAGQLDRALDFIKAIP 500
Query: 557 TEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGR 616
E + G+ ++ ++ + E+ A L++LE N + YV ++N+YA+ W +
Sbjct: 501 VEPGPSVWGALVSCSIIHGDLEMQELAYRFLIQLEPKNPSNYVSISNLYASSRRWDAVAE 560
Query: 617 IRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+R+ M+ + + GCSW+ + ++ H F V D +HP + +IY++L
Sbjct: 561 VRRMMKDKRLRKVPGCSWISINNKTHCFYVADKAHPSSTSIYNML 605
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 115/483 (23%), Positives = 202/483 (41%), Gaps = 105/483 (21%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H ++I+ G T+ N ++ +Y K ESRK+FDEM RN SWN +I+ S +
Sbjct: 147 HGKSIRTGFVSDTVVANSIMSMYCKCGNFDESRKVFDEMTIRNSGSWNVLIAGYAVSGN- 205
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
C + E +E F++ DE +R D +T++S L
Sbjct: 206 ----------------------CNF-REETWE------FVKQMQMDE-VRPDAYTISSLL 235
Query: 133 NLCV-KLLNVGFGRQLHAFMVKT----SNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
LC + +GR+LH ++VK D+ LIDMYS+ RVF+
Sbjct: 236 PLCDGDMGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFDRMK 295
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
CR + SW +I+GYV+NGD++E L LF
Sbjct: 296 ---------------CR------------------NVFSWTAMINGYVENGDSDEALSLF 322
Query: 248 VRMGE-NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
M +GV N + S L AC + ++IH + ++ L + + + ++D+Y K
Sbjct: 323 RDMQVIDGVEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSK 382
Query: 307 CENMNYAESMLLLKGV-RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
C +++ A + + +++ S SSMI GY L G +EA +D + +
Sbjct: 383 CGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQA----------- 431
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR-MGVQ 424
G+ D + V +L AC ++ G I++ ++ G++
Sbjct: 432 ---------------------GIRPDMITTVGILSACGRSGLVNEGLNIYSSVINDYGIE 470
Query: 425 MDKKLISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
++ + +VDM + G + A + I +E ++ +++C HG E L +
Sbjct: 471 PTLEICACIVDMLGRAGQLDRALDFIKAIPVEPGPSVWGALVSCSIIHGDLEMQELAYRF 530
Query: 484 MLE 486
+++
Sbjct: 531 LIQ 533
>gi|356495756|ref|XP_003516739.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71420-like [Glycine max]
Length = 782
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 193/633 (30%), Positives = 314/633 (49%), Gaps = 75/633 (11%)
Query: 49 DEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADAL 108
D + +VF N II+ K L AR +FD H+++V++ +++ G+ + G +
Sbjct: 120 DPTIQNDVFLTNHIINMYCKCGHLAYARYVFDQMSHRNIVSWTALISGHAQS-GLVRECF 178
Query: 109 KLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLID 168
LF + + H R +EF S L+ C + ++ G Q+HA +K S DA+ + +SLI
Sbjct: 179 SLFSGLLA---HFRPNEFAFASLLSACEEH-DIKCGMQVHAVALKISLDANVYVANSLIT 234
Query: 169 MYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWN 228
MYSK G +A T ++ E + VSWN
Sbjct: 235 MYSK----------RSGFGGGYAQTPDDAW---------------TMFKSMEFRNLVSWN 269
Query: 229 TLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC--CGLRNV------KCAKE 280
++I+ + G ++ + LF M NG+ ++ T S S+ CG +V KC +
Sbjct: 270 SMIAXFQLRGLGDKAICLFAHMYCNGIGFDRATLLSVFSSLNECGAFDVINTYLRKCF-Q 328
Query: 281 IHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGN 340
+H +K+GLIS V + ++ Y +L G+
Sbjct: 329 LHCLTIKSGLISEIEVVTALIKSYA------------------------------NLGGH 358
Query: 341 MEEARRHF-DSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILL 399
+ + R F D+ ++ ++V WTAL S + + ++ E F L + + ++ + D I L
Sbjct: 359 ISDCYRIFHDTSSQLDIVSWTALISVFAE-RDPEQAFLLFCQ-LHRQSYLPDWYTFSIAL 416
Query: 400 GACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLV 459
ACA IH+ +++ G Q D L + L+ Y++CG++ +E +F DLV
Sbjct: 417 KACAYFVTEQHAMAIHSQVIKKGFQEDTVLCNALMHAYARCGSLALSEQVFNEMGCHDLV 476
Query: 460 LYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSM 519
+N M+ YA HG + A+ LF++M + PD+ TFVA+LSA H G V+ G K FNSM
Sbjct: 477 SWNSMLKSYAIHGQAKDALELFQQM---NVCPDSATFVALLSACSHVGLVDEGVKLFNSM 533
Query: 520 TADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAEL 579
+ D+ + P+ DHY+CM+DLYGRA ++ +A E ++ +P + D+VI S L CR + L
Sbjct: 534 SDDHGVVPQLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGETRL 593
Query: 580 AGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEH 639
A A +K LE NN YVQ++N+Y++ G++ + G IR +M K + G SWV +
Sbjct: 594 AKLAADKFKELEPNNSLGYVQMSNIYSSGGSFTKAGLIRNEMSDFKVRKEPGLSWVEIGK 653
Query: 640 EIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
++H F G HP AI S L I G+L E+
Sbjct: 654 QVHEFGSGGQYHPNRGAILSRLEIVIGQLKEMG 686
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 142/313 (45%), Gaps = 57/313 (18%)
Query: 218 QPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKC 277
+PE A + + I G+ EE L L ++ T+AS AC + ++
Sbjct: 54 EPE-TIATNIDAQIRALSTQGNIEEALSLLYTHSSLSLQ----TYASLFHACAQKKCLQH 108
Query: 278 AKEIHSWVL-KNGLISNP-FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGY 335
+H +VL K+ I N F+++ I+++YCKC ++ Y
Sbjct: 109 GMTLHHYVLHKDPTIQNDVFLTNHIINMYCKCGHLAY----------------------- 145
Query: 336 SLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA---QNCEALFD-LLSEFVTKEGVVTD 391
AR FD ++ +N+V WTAL SG+ ++ + C +LF LL+ F E
Sbjct: 146 --------ARYVFDQMSHRNIVSWTALISGHAQSGLVRECFSLFSGLLAHFRPNE----- 192
Query: 392 ALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNM--TYAE-- 447
LL AC + + G ++HA L++ + + + ++L+ MYSK YA+
Sbjct: 193 -FAFASLLSACE-EHDIKCGMQVHAVALKISLDANVYVANSLITMYSKRSGFGGGYAQTP 250
Query: 448 ----IIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAF 503
+F++ R+LV +N MIA + G +KAI LF M GI D T +++ S+
Sbjct: 251 DDAWTMFKSMEFRNLVSWNSMIAXFQLRGLGDKAICLFAHMYCNGIGFDRATLLSVFSSL 310
Query: 504 RHCGSVEMGEKYF 516
CG+ ++ Y
Sbjct: 311 NECGAFDVINTYL 323
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 8/117 (6%)
Query: 7 KEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISAC 66
+ A+ H Q IK G T+ N L+H Y++ L S ++F+EM ++ SWN+++ +
Sbjct: 426 QHAMAIHSQVIKKGFQEDTVLCNALMHAYARCGSLALSEQVFNEMGCHDLVSWNSMLKSY 485
Query: 67 IKSHDLKQARSLFDS-SPHKDLVTYNSML--CGYINAEGYEADALKLFIEMQSADEH 120
K A LF + D T+ ++L C ++ G + +KLF M +D+H
Sbjct: 486 AIHGQAKDALELFQQMNVCPDSATFVALLSACSHV---GLVDEGVKLFNSM--SDDH 537
>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
Length = 854
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 200/666 (30%), Positives = 311/666 (46%), Gaps = 106/666 (15%)
Query: 13 HVQAIKAGL--TLTTITTNQLIHIYSKHNLLRESRKLF-DEMPER-NVFSWNTIISACIK 68
H A+K GL N L+ +Y++ L+ ++++LF P R +V +WNT++S ++
Sbjct: 189 HAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQ 248
Query: 69 SHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
S +FD +A++ +M + +R D T
Sbjct: 249 S-------GMFD-------------------------EAVQTLYDMVALG--VRPDGVTF 274
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSN-DASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
S L C +L + GR++HA+++K A+ F S+L+DMY+ +A +VF+
Sbjct: 275 ASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFD--- 331
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
MV ++ M WN +I GY Q G EE L+LF
Sbjct: 332 ----------MVPDSGKQLGM------------------WNAMICGYAQAGMDEEALRLF 363
Query: 248 VRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
RM E G E T AS L AC + +H +V+K G+ N FV + ++D+Y +
Sbjct: 364 ARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYAR 423
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
G + ARR F + +VV W L +G
Sbjct: 424 L-------------------------------GKTDVARRIFAMVDLPDVVSWNTLITGC 452
Query: 367 VKAQNCEALFDLLSEFVTKE--GVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
V + F L E E GVV +A+ L+ LL CA+ AA GKEIH Y +R +
Sbjct: 453 VVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALD 512
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
D + S LVDMY+KCG + + +F R+ + +NV+I Y HG +A +LF+ M
Sbjct: 513 TDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRM 572
Query: 485 LEKG-IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRAN 543
G +P+ VTF+A L+A H G V+ G + F++M D+ + P D AC++D+ GRA
Sbjct: 573 TASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAG 632
Query: 544 QLEKAIEFMKSIPTEEDAV-ILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLA 602
+L++A + S+ E V + L CRL+RN L A E+LL LE + YV L
Sbjct: 633 RLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLC 692
Query: 603 NVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLA 662
N+Y+A G W +R +MR + GCSW+ V+ IH F G+ +HP + +++ +
Sbjct: 693 NIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHME 752
Query: 663 IFTGEL 668
GE+
Sbjct: 753 ALWGEM 758
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 138/322 (42%), Gaps = 49/322 (15%)
Query: 196 NAMVAACCREGEMEMALKTFWR-QPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
NA++ A R G + AL+ F +DAVS+N+LIS + L M G
Sbjct: 98 NALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGG 157
Query: 255 VRWNEHTFASALSACCGLRN----VKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
T S L A L V+ +E H++ LKNGL+
Sbjct: 158 HPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHG----------------- 200
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT--EKNVVVWTALFSGYVK 368
F+ ++++ Y+ G + +A+R F T +VV W + S V+
Sbjct: 201 ------------HQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQ 248
Query: 369 A----QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG-V 423
+ + + L+D+++ GV D + L AC+ L G+E+HAY+++ +
Sbjct: 249 SGMFDEAVQTLYDMVA-----LGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDEL 303
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIE--RDLVLYNVMIACYAHHGHEEKAILLF 481
+ + S LVDMY+ + A +F + + L ++N MI YA G +E+A+ LF
Sbjct: 304 AANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLF 363
Query: 482 EEM-LEKGIKPDAVTFVAILSA 502
M E G P T ++L A
Sbjct: 364 ARMEAEAGFVPCETTMASVLPA 385
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 166/399 (41%), Gaps = 49/399 (12%)
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI--SNPFVSSGIVDVYC 305
+ M + + A+ + LR+ + A+ IH+ L+ GL+ +P V++ ++ Y
Sbjct: 46 ITMASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYA 105
Query: 306 KCENMNYAESML--LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
+C + A + + ++ S +S+I L F + L
Sbjct: 106 RCGRLAAALEVFGSISDSAHDAVSFNSLISALCL----------FRRWDHALAALRAMLA 155
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
G+ L+ F + L V L A A AA+ G+E HA+ L+ G+
Sbjct: 156 GGHP-----------LTSFT-----LVSVLRAVSHLPAAA--AAVRLGREAHAFALKNGL 197
Query: 424 QMDKKLIS--TLVDMYSKCGNMTYAEIIFQNFI--ERDLVLYNVMIACYAHHGHEEKAIL 479
+ + L+ MY++ G + A+ +F D+V +N M++ G ++A+
Sbjct: 198 LHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQ 257
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
+M+ G++PD VTF + L A +++G + + D +++ + + ++D+Y
Sbjct: 258 TLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMY 317
Query: 540 GRANQLEKAIEFMKSIPTEE------DAVILG---SFLNVCRLNRNAELAGEAEEKLLRL 590
Q+ KA + +P +A+I G + ++ L A + EAE +
Sbjct: 318 ATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARM--EAEAGFVPC 375
Query: 591 EGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRF 629
E + A A G A G + K RGM GNRF
Sbjct: 376 ETTMASVLPACARSEAFAGKEAVHGYVVK--RGMAGNRF 412
>gi|28564593|dbj|BAC57760.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50509708|dbj|BAD31746.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 703
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 191/674 (28%), Positives = 306/674 (45%), Gaps = 79/674 (11%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLF---DEMPERNVFSWNT 61
+L+ + H ++ GL+ I +L+ +Y+ H L S +P +N
Sbjct: 88 HLRLGVQLHALSLSLGLSRHPILLPRLLSVYTSHPSLLPSAASVAADSTLP----LPYNV 143
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+IS+C++ H L P + L Y M +
Sbjct: 144 LISSCLR-HGL----------PLQALAAYQEM-----------------------GKNGV 169
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
D FT S L C + + GR +H D + F ++L+ MY+KC A +
Sbjct: 170 LPDVFTYPSVLRACAEARELVLGRAVHMHAAGAGMDGNLFFQNALMSMYAKCGDLASARK 229
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQ----PELNDAVSWNTLISGYVQN 237
VF+G + +++S N+M+++ G+ A++ F R E+N +V+WNT+ GY+Q
Sbjct: 230 VFDGMVQR-DVVSWNSMISSYAAVGQWAEAMELFRRMRDEGTEVN-SVTWNTIAGGYIQM 287
Query: 238 GDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVS 297
D + L M G + T L+AC + ++ KEIH ++ VS
Sbjct: 288 RDYRAAVGLIREMVRGGAEVDYVTLVIGLNACSRVGWLRLGKEIHGLAVRMCCDQVESVS 347
Query: 298 SGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVV 357
+ ++ +Y +C++M E AR F L VV
Sbjct: 348 NALITMYARCKDM-------------------------------ECARMLFRMLECPGVV 376
Query: 358 VWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
W + S + + E + E + + GV + + +V L CA A L G+E+H +
Sbjct: 377 TWNTMLSSFALSDCAEEASSIFREMICR-GVKPNYVTVVTYLALCARVANLQHGQELHGH 435
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
I++ G + + L ++L+DMYSK G ++ A+ +F + D++ Y MIA Y G A
Sbjct: 436 IVKHGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDCDMISYTSMIAGYGMQGKGTVA 495
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID 537
+ LFE+M++ GIKPD + V +LSA H G V GE+ FN M Y I P+ +HY+CMID
Sbjct: 496 LRLFEQMIDSGIKPDHIIMVTVLSACSHSGLVLEGEELFNKMVISYGIKPQMEHYSCMID 555
Query: 538 LYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKAR 597
LY RA LEKA E + P + + + + C N E+ A KLL + N
Sbjct: 556 LYARAGLLEKAEEMLDHTPFPPTSTMWAALVGACHDRGNIEIGERAARKLLEMRTENAGH 615
Query: 598 YVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
YV +AN+YAA G W E+ +RK MR + + G +W + + F VGD S+P I
Sbjct: 616 YVLIANMYAAAGCWDELATVRKLMRDLGVTKAPGLAWTDLGNGFTPFLVGDRSNPLAPEI 675
Query: 658 YSVLAIFTGELYEI 671
Y VL + ++ I
Sbjct: 676 YVVLDELSEQMRNI 689
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 175/601 (29%), Positives = 296/601 (49%), Gaps = 78/601 (12%)
Query: 74 QARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLN 133
AR +FD+ P D + +N++L G +E EA F+ M A +R D T+ S+L
Sbjct: 167 DARKVFDTVPSPDTILWNTLLAGLPGSEALEA-----FVRMVDAGR-VRPDSTTLASSLR 220
Query: 134 LCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLI 193
+ ++ GR +H + VK V+ L+ +YSKC
Sbjct: 221 AAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKC-------------------- 260
Query: 194 SKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGEN 253
G+M+ A F R + D V++N LISGY NG E ++LF + +
Sbjct: 261 ------------GDMDSAQFLFDRM-DNPDLVAYNALISGYSVNGMVESSVELFKELTAS 307
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA 313
G R N T + + + A+ +H++V+K L ++ VS+ + +YC+ +M
Sbjct: 308 GWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDM--- 364
Query: 314 ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE 373
E AR FD++ EK + W A+ SGY + E
Sbjct: 365 ----------------------------ESARSIFDAMLEKTMESWNAMISGYAQNGLTE 396
Query: 374 ---ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
ALF L+ E + +T + L ACA AL GK +H I + ++++ ++
Sbjct: 397 MAVALFQLMQELNVQPNPIT----ISSTLSACAHLGALSLGKWVHRIISKEKLELNVYVM 452
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+ L+DMY+KCG++ A IF +++V +N MI+ Y HG +A+ L+++ML+ I
Sbjct: 453 TALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDMLDARIL 512
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
P + TF++++ A H G V+ G+K F MT +Y+I+P +H CM+DL GRA +L +A+E
Sbjct: 513 PTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCMVDLLGRAGKLNEALE 572
Query: 551 FMKSIPTEE-DAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEG 609
+ P + G+ L C +++N++LA A +KL L+ N YV L+N+Y ++
Sbjct: 573 LISEFPQSAIGPGVWGALLGACMVHKNSDLAKLASQKLFELDSENAGYYVLLSNLYTSKK 632
Query: 610 NWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELY 669
+++E +R++ + K + GC+ + + H+F GD HP++ AIYS L T ++
Sbjct: 633 HYSEAAVVRQEAKTRKLVKTPGCTLIEIGDRPHVFMAGDHLHPQSEAIYSYLERLTAKMI 692
Query: 670 E 670
E
Sbjct: 693 E 693
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 113/225 (50%), Gaps = 5/225 (2%)
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV 383
++F S++ Y ++AR+ FD++ + ++W L +G ++ EA + V
Sbjct: 148 DTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLPGSEALEAFVRM----V 203
Query: 384 TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNM 443
V D+ L L A A + + G+ +H Y ++ G+ + +++ L+ +YSKCG+M
Sbjct: 204 DAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDM 263
Query: 444 TYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAF 503
A+ +F DLV YN +I+ Y+ +G E ++ LF+E+ G +P++ T VA++ +
Sbjct: 264 DSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVY 323
Query: 504 RHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
G E+ + ++ ++ + + LY R N +E A
Sbjct: 324 SPFGH-ELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESA 367
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 36/200 (18%)
Query: 70 HDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVT 129
+D++ ARS+FD+ K + ++N+M+ GY G A+ LF MQ + +++ + T++
Sbjct: 362 NDMESARSIFDAMLEKTMESWNAMISGYAQ-NGLTEMAVALFQLMQ--ELNVQPNPITIS 418
Query: 130 STLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEE 189
STL+ C L + G+ +H + K + + + +++LIDMY+KC EA +F+ +
Sbjct: 419 STLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDR-MDN 477
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
N++S NAM ISGY +G E LKL+
Sbjct: 478 KNVVSWNAM--------------------------------ISGYGLHGQGAEALKLYKD 505
Query: 250 MGENGVRWNEHTFASALSAC 269
M + + TF S + AC
Sbjct: 506 MLDARILPTSSTFLSVIYAC 525
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 58/118 (49%), Gaps = 14/118 (11%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIH-IYSKHNLLRESRKLFDEMPERNVFSW 59
M+ LN++ I + A L ++ + +H I SK L E NV+
Sbjct: 405 MQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKL------------ELNVYVM 452
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSA 117
+I K + +ARS+FD +K++V++N+M+ GY G A+ALKL+ +M A
Sbjct: 453 TALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGY-GLHGQGAEALKLYKDMLDA 509
>gi|413946224|gb|AFW78873.1| hypothetical protein ZEAMMB73_227843 [Zea mays]
Length = 778
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 177/589 (30%), Positives = 291/589 (49%), Gaps = 70/589 (11%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N ++ K DL+ + +F+ K+ V++NS + + +A G+ D L++F M D
Sbjct: 259 NALVDMYGKFGDLESSMHVFNGMQEKNEVSWNSAIGCFAHA-GFHEDVLEMFRLMSEHD- 316
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
+ T++S L V L G++LH + ++ + ++ F ++L+DMY+K C E+A
Sbjct: 317 -VTPGSVTLSSLLPALVDLGYFHLGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKA 375
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
+FE E+ + VSWN +I+ QNG
Sbjct: 376 SAIFENI---------------------------------EVRNVVSWNAMIANLTQNGA 402
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
E +L + M +NG N T + L AC + +VK K+IH+W ++ L+S+ FVS+
Sbjct: 403 EAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIRRSLMSDLFVSNA 462
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
++DVY KC +N A R FD +EK+ V +
Sbjct: 463 LIDVYAKCGQLNLA-------------------------------RYIFDR-SEKDGVSY 490
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
L GY ++Q C L + + G+ DA+ + L AC+ +A GKEIH ++
Sbjct: 491 NTLIVGYSQSQCCFESLHLFQQ-MRLAGIEHDAVSFMGCLSACSNLSAFKQGKEIHGVLV 549
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
+ + L ++L+D+Y+K G + A IF ++D+ +N MI Y HG + A
Sbjct: 550 KRLLDSHPFLANSLLDVYTKGGMLDTASKIFNRITQKDVASWNTMILGYGMHGQIDVAFE 609
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
LF+ M + GI+ D V+++A+LS H G V+ G+KYF+ M A I P+ HYACM+DL
Sbjct: 610 LFDLMKDDGIEYDHVSYIAVLSVCSHGGLVDRGKKYFSQMIAQ-NIKPQQMHYACMVDLL 668
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYV 599
GRA QL ++ E ++++P ++ + G+ L CR++ + ELA A E L L+ N Y
Sbjct: 669 GRAGQLSESAEIIRNMPFRANSDVWGALLGSCRIHGDIELARLAAEHLFELKPENSGYYT 728
Query: 600 QLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGD 648
L N+Y+ G W E ++K M+ K + SWV +++ F VGD
Sbjct: 729 LLRNMYSESGMWNEANGVKKLMKSRKVQKNPAYSWVQSGNKLQAFLVGD 777
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 150/345 (43%), Gaps = 47/345 (13%)
Query: 220 ELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA---SALSACCGLRNVK 276
L A WN+L E L+++ RM +GVR ++ TF A +A +
Sbjct: 76 RLRSAFLWNSLSRALASAALPCEALRVYNRMVRSGVRPDDRTFPFALHAAAAVAQAEHPA 135
Query: 277 CAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYS 336
E+H+ L+ GL+ + DV F+ ++++ Y+
Sbjct: 136 KGAELHAAALRRGLL--------LADV----------------------FAGNTLVTFYA 165
Query: 337 LQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV--TKEGVVTDALI 394
+ G +ARR FD + ++VV W +L S + E D V + GV +
Sbjct: 166 VCGRAADARRVFDEMPARDVVSWNSLVSALLTNGMLE---DAKRAVVGMMRSGVPVNVAS 222
Query: 395 LVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFI 454
LV +L AC + G +H +L+ G+ L + LVDMY K G++ + +F
Sbjct: 223 LVSILPACGTERDEGFGLCVHGLVLKFGLNSVVNLGNALVDMYGKFGDLESSMHVFNGMQ 282
Query: 455 ERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
E++ V +N I C+AH G E + +F M E + P +VT ++L A G +G++
Sbjct: 283 EKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGSVTLSSLLPALVDLGYFHLGKE 342
Query: 515 YFNSMTADYKI--SPETDHYAC--MIDLYGRANQLEKAIEFMKSI 555
Y I + E+D + ++D+Y + EKA ++I
Sbjct: 343 LHG-----YSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENI 382
>gi|224137432|ref|XP_002322556.1| predicted protein [Populus trichocarpa]
gi|222867186|gb|EEF04317.1| predicted protein [Populus trichocarpa]
Length = 702
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 193/637 (30%), Positives = 317/637 (49%), Gaps = 43/637 (6%)
Query: 31 LIHIYSKHNLLRESRKLFDEMP---ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDL 87
+I Y+++ + ++R+LFD +P + V WN +IS +K + +A+ LFD P K+L
Sbjct: 74 MITCYTRNGEVEKARELFDSLPCSYRKGVACWNAMISGYVKKGRVNEAKRLFDEMPVKNL 133
Query: 88 VTYNSMLCGYINAEGYEADALKLFIEMQSAD---EHIRMDEFTVTSTLNLCVKLLNVGFG 144
+++NSML GY L+ F EM D ++ +D F L+ K F
Sbjct: 134 ISWNSMLAGYTQNRKMRL-GLEFFNEMDERDVVSWNLMVDGFIQVGDLDSAWKF----FQ 188
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
+V SGFA + I E+ R+F+ N++S NAM++A +
Sbjct: 189 ETQKPNVVSWVTMLSGFARNGNI---------LESRRLFDQMPSR-NIVSWNAMISAYVQ 238
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFAS 264
E++ A + F PE D+VSW T+I+GYV+ G +E +L M + + S
Sbjct: 239 RCEIDEASRLFEEMPE-RDSVSWTTMINGYVRIGKLDEARELLNEMPYRNIG-AQTAMIS 296
Query: 265 ALSACCGLRNVK-CAKEIHSW--VLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKG 321
C + + EI +W V N +I+ I + C + M
Sbjct: 297 GYIQCNKVDEARRFFDEIGTWDVVCWNAMIAGYAHHGRINEALCLSKRMVN--------- 347
Query: 322 VRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY-VKAQNCEAL--FDL 378
++ + ++MI Y+ G M+ A + F+ + E+++V W +L +G+ + QN +AL F L
Sbjct: 348 -KDMVTWNTMISCYAQVGQMDRAVKIFEEMGERDLVSWNSLIAGFMLNGQNLDALKSFAL 406
Query: 379 LSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYS 438
+ EG D L L +CA AAL G ++H +++ G + + L+ MY+
Sbjct: 407 MGH----EGKKPDQLSFACGLSSCATIAALQVGNQLHQVVVKGGYLNYLVVNNALITMYA 462
Query: 439 KCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVA 498
KCG + A ++F D++ +N +I YA +G+ ++A+ LFEEM +G+ PD VTF+
Sbjct: 463 KCGRILEAGLVFNGICHADVISWNSLIGGYAINGYGKEALKLFEEMASEGMAPDEVTFIG 522
Query: 499 ILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE 558
ILSA H G V+ G K F M+ Y I P +HYACM+DL GR +L++A E ++ + +
Sbjct: 523 ILSACNHAGMVDHGLKLFKCMSKVYAIEPLAEHYACMVDLLGRVGRLDEAFEIVRGMKVK 582
Query: 559 EDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIR 618
A + G+ L CR + N EL A KL E + + YV L+N++A W E+ +R
Sbjct: 583 ATAGVWGALLGACRAHGNLELGRLAAHKLSEFEPHKTSNYVLLSNIHAEANRWNEVQEVR 642
Query: 619 KQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTN 655
M + GCSWV V +++H F D + + +
Sbjct: 643 MLMNASSTVKEPGCSWVEVRNQVHGFLSDDSTRSRPD 679
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 129/468 (27%), Positives = 230/468 (49%), Gaps = 35/468 (7%)
Query: 51 MPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKL 110
M E+N ++N++IS K+ + AR+LFD P ++LV++N+M+ GY++ ++ +A KL
Sbjct: 1 MAEKNTVTYNSMISVYAKNGRINAARNLFDKMPRRNLVSWNTMVSGYLHNGKFD-EAYKL 59
Query: 111 FIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV-SSLIDM 169
F+ M R D F+ T + + V R+L F + G A +++I
Sbjct: 60 FVIMP------RRDLFSWTLMITCYTRNGEVEKAREL--FDSLPCSYRKGVACWNAMISG 111
Query: 170 YSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNT 229
Y K EA R+F+ + NLIS N+M+A + +M + L+ F+ + + D VSWN
Sbjct: 112 YVKKGRVNEAKRLFDEMPVK-NLISWNSMLAGYTQNRKMRLGLE-FFNEMDERDVVSWNL 169
Query: 230 LISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG 289
++ G++Q GD + K F + + N ++ + LS N+ ++ + +
Sbjct: 170 MVDGFIQVGDLDSAWKFF----QETQKPNVVSWVTMLSGFARNGNILESRRLFDQMPSRN 225
Query: 290 LIS-NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHF 348
++S N +S+ + +CE ++ A + R+S S ++MI GY G ++EAR
Sbjct: 226 IVSWNAMISAYVQ----RCE-IDEASRLFEEMPERDSVSWTTMINGYVRIGKLDEARELL 280
Query: 349 DSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAAL 408
+ + +N+ TA+ SGY++ + E T + V +A+I
Sbjct: 281 NEMPYRNIGAQTAMISGYIQCNKVDEARRFFDEIGTWDVVCWNAMI----------AGYA 330
Query: 409 HPGKEIHAYIL--RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIA 466
H G+ A L RM V D +T++ Y++ G M A IF+ ERDLV +N +IA
Sbjct: 331 HHGRINEALCLSKRM-VNKDMVTWNTMISCYAQVGQMDRAVKIFEEMGERDLVSWNSLIA 389
Query: 467 CYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
+ +G A+ F M +G KPD ++F LS+ ++++G +
Sbjct: 390 GFMLNGQNLDALKSFALMGHEGKKPDQLSFACGLSSCATIAALQVGNQ 437
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 119/269 (44%), Gaps = 43/269 (15%)
Query: 22 TLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDS 81
T + N +I Y+ H + E+ L M +++ +WNT+IS + + +A +F+
Sbjct: 316 TWDVVCWNAMIAGYAHHGRINEALCLSKRMVNKDMVTWNTMISCYAQVGQMDRAVKIFEE 375
Query: 82 SPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNV 141
+DLV++NS++ G++ G DALK F M E + D+ + L+ C + +
Sbjct: 376 MGERDLVSWNSLIAGFM-LNGQNLDALKSFALM--GHEGKKPDQLSFACGLSSCATIAAL 432
Query: 142 GFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAA 201
G QLH +VK ++LI MY+KC EA VF G
Sbjct: 433 QVGNQLHQVVVKGGYLNYLVVNNALITMYAKCGRILEAGLVFNGICHA------------ 480
Query: 202 CCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHT 261
D +SWN+LI GY NG +E LKLF M G+ +E T
Sbjct: 481 ---------------------DVISWNSLIGGYAINGYGKEALKLFEEMASEGMAPDEVT 519
Query: 262 FASALSACC-------GLRNVKCAKEIHS 283
F LSAC GL+ KC ++++
Sbjct: 520 FIGILSACNHAGMVDHGLKLFKCMSKVYA 548
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 13/104 (12%)
Query: 455 ERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
E++ V YN MI+ YA +G A LF++M + + V++ ++S + H G + K
Sbjct: 3 EKNTVTYNSMISVYAKNGRINAARNLFDKMPRRNL----VSWNTMVSGYLHNGKFDEAYK 58
Query: 515 YFNSMTADYKISPETD--HYACMIDLYGRANQLEKAIEFMKSIP 556
F I P D + MI Y R ++EKA E S+P
Sbjct: 59 LF-------VIMPRRDLFSWTLMITCYTRNGEVEKARELFDSLP 95
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 180/608 (29%), Positives = 303/608 (49%), Gaps = 71/608 (11%)
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I K+ DL R +FD + +V + ++ Y + GY +A++LF++M +
Sbjct: 195 LIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQS-GYSDEAVELFLDM--LENGF 251
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+ D++T++S L+ C +L + G+QLH+ ++ ++ L+DMY+K
Sbjct: 252 QPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAK--------- 302
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
S N RE F R P+ N ++W L+SGYVQ G +
Sbjct: 303 ------------SHNGQSLHNARE--------VFNRMPKHN-VMAWTALLSGYVQRGSQD 341
Query: 242 -EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
+ + LF +M G+R N T++S L AC L + ++IH+ +K+ L V + +
Sbjct: 342 NQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNAL 401
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
V +Y AES G++EEAR FD L EKN+V
Sbjct: 402 VSMY--------AES-----------------------GSIEEARHAFDQLYEKNMVS-- 428
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
FSG + + + G+ T L+ A A L G+ +HA L+
Sbjct: 429 --FSGNLDGDGRSNTYQDYQIERMELGIST--FTFGSLISAAASVGMLTKGQRLHALSLK 484
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
G D+ + ++LV MYS+CG + A +F + +++ + MI+ A HG+ +A+ L
Sbjct: 485 AGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALEL 544
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
F +M+ G+KP+ VT++A+LSA H G V+ G+++F M + + P +HYACM+DL G
Sbjct: 545 FHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLG 604
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQ 600
R+ +E A++F+ +P + DA++ + L C+ + N ++ A +++LE + A YV
Sbjct: 605 RSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAANHVIQLEPQDPAPYVL 664
Query: 601 LANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSV 660
L+N+YA G W ++ RIR MR + G SW++V++ IH F GD SHP+ IY+
Sbjct: 665 LSNLYAEAGLWDQVARIRSLMRDKNLMKEKGLSWMHVDNTIHEFRAGDTSHPQAEEIYTK 724
Query: 661 LAIFTGEL 668
L E+
Sbjct: 725 LETLIREI 732
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 128/517 (24%), Positives = 227/517 (43%), Gaps = 108/517 (20%)
Query: 4 LNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPE--RNVFSWNT 61
++L AL H+ + L + N L+ +YSK + + +R +FD MP R++ SW T
Sbjct: 63 IHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSW-T 121
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+++C+ + G EA+AL+LF E + +E +
Sbjct: 122 AMASCLSRN-------------------------------GAEAEALRLFGE--TLEEGL 148
Query: 122 RMDEFTVTSTLNLCV--KLLNVGFGRQLHAFMVKTSNDASGFAVS-SLIDMYSKCRCYEE 178
+ FT+ + C +L ++ G L + K + +V +LIDM++K
Sbjct: 149 LPNAFTLCAATQACFASELFHLAGGAVL-GLVFKLGFWGTDVSVGCALIDMFAKNGDLVA 207
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
RVF+G E V W LI+ Y Q+G
Sbjct: 208 MRRVFDGLFERT---------------------------------VVVWTLLITRYAQSG 234
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
++E ++LF+ M ENG + +++T +S LSAC L + + +++HS L+ GL S+ VS
Sbjct: 235 YSDEAVELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSC 294
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
G+VD+Y K N G SL AR F+ + + NV+
Sbjct: 295 GLVDMYAKSHN------------------------GQSLH----NAREVFNRMPKHNVMA 326
Query: 359 WTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
WTAL SGYV+ + + +L + EG+ + + +L ACA G++IH +
Sbjct: 327 WTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHC 386
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH-HGHEEKA 477
++ + + + LV MY++ G++ A F E+++V ++ + + +++
Sbjct: 387 VKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGDGRSNTYQDYQ 446
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
I E +E GI TF +++SA G + G++
Sbjct: 447 I----ERMELGIS--TFTFGSLISAAASVGMLTKGQR 477
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 166/383 (43%), Gaps = 71/383 (18%)
Query: 140 NVGFGRQLHAFMVKTSN--DASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNA 197
++ GR L +++T + + +SL+ +YSKC A VF+G
Sbjct: 62 DIHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDG------------ 109
Query: 198 MVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRW 257
M + L+ D VSW + S +NG E L+LF E G+
Sbjct: 110 ----------MPVGLR---------DLVSWTAMASCLSRNGAEAEALRLFGETLEEGLLP 150
Query: 258 NEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI--VDVYCKCENMNYAES 315
N T +A AC A E+ + L G + G DV C
Sbjct: 151 NAFTLCAATQAC-------FASEL--FHLAGGAVLGLVFKLGFWGTDVSVGC-------- 193
Query: 316 MLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEAL 375
++I ++ G++ RR FD L E+ VVVWT L + Y ++ +
Sbjct: 194 --------------ALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEA 239
Query: 376 FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVD 435
+L + + + G D L +L AC + G+++H+ LR+G++ D + LVD
Sbjct: 240 VELFLDML-ENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVD 298
Query: 436 MYSKCGN---MTYAEIIFQNFIERDLVLYNVMIACYAHHGHEE-KAILLFEEMLEKGIKP 491
MY+K N + A +F + +++ + +++ Y G ++ + ++LF +ML +GI+P
Sbjct: 299 MYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRP 358
Query: 492 DAVTFVAILSAFRHCGSVEMGEK 514
+ +T+ ++L A + G + G +
Sbjct: 359 NHITYSSMLKACANLGDQDSGRQ 381
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 117/236 (49%), Gaps = 11/236 (4%)
Query: 329 SSMIVGYSLQGNMEEARRHFDSLTE--KNVVVWTALFSGYVK-AQNCEALFDLLSEFVTK 385
+S++ YS + AR FD + +++V WTA+ S + EAL L E + +
Sbjct: 88 NSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMASCLSRNGAEAEAL-RLFGETL-E 145
Query: 386 EGVVTDALILVILLGACALQAALH-PGKEIHAYILRMGV-QMDKKLISTLVDMYSKCGNM 443
EG++ +A L AC H G + + ++G D + L+DM++K G++
Sbjct: 146 EGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKLGFWGTDVSVGCALIDMFAKNGDL 205
Query: 444 TYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAF 503
+F ER +V++ ++I YA G+ ++A+ LF +MLE G +PD T ++LSA
Sbjct: 206 VAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSAC 265
Query: 504 RHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRAN---QLEKAIEFMKSIP 556
GS +G++ +S+ + ++ ++D+Y +++ L A E +P
Sbjct: 266 TELGSFRLGQQ-LHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMP 320
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 97/221 (43%), Gaps = 41/221 (18%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N ++S +S +++AR FD K++V+++ L G + Y+ + Q
Sbjct: 399 NALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGDGRSNTYQ--------DYQIERM 450
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
+ + FT S ++ + + G++LHA +K + +SL+ MYS+C +A
Sbjct: 451 ELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDA 510
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
C+VF+ + N+IS W ++ISG ++G
Sbjct: 511 CQVFDEMNDH-NVIS--------------------------------WTSMISGLAKHGY 537
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKE 280
A L+LF M GV+ N+ T+ + LSAC VK KE
Sbjct: 538 AARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKE 578
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 98/254 (38%), Gaps = 43/254 (16%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H ++KAG N L+ +YS+ L ++ ++FDEM + NV SW ++IS K
Sbjct: 479 HALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAK---- 534
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
GY A AL+LF +M +A ++ ++ T + L
Sbjct: 535 ----------------------------HGYAARALELFHDMIAAG--VKPNDVTYIAVL 564
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFA-VSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
+ C V G++ M K + ++D+ + E+A +V+
Sbjct: 565 SACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGRSGLVEDALDFINEMPCQVD 624
Query: 192 LISKNAMVAACCREGEMEMA--LKTFWRQPELNDAVSWNTLISGYVQNG--DAEEGLKLF 247
+ ++ AC M++ Q E D + L + Y + G D ++
Sbjct: 625 ALVWKTLLGACKTHNNMDIGEIAANHVIQLEPQDPAPYVLLSNLYAEAGLWDQVARIRSL 684
Query: 248 VR----MGENGVRW 257
+R M E G+ W
Sbjct: 685 MRDKNLMKEKGLSW 698
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 163/546 (29%), Positives = 278/546 (50%), Gaps = 71/546 (13%)
Query: 130 STLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEE 189
S ++L ++ NV RQ+HA +V + L+ Y++ + ++A +F+G T
Sbjct: 5 SCIDLLLRCRNVFHIRQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLT-- 62
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
+ D+ +W+ ++ G+ + GD F
Sbjct: 63 -------------------------------MRDSKTWSVMVGGFAKAGDHAGCYATFRE 91
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
+ GV + +T + C +++ + IH VLK+GL+S+ FV + +VD+Y KC
Sbjct: 92 LLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKC-- 149
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
IV +E+A+R F+ + K++V WT + Y
Sbjct: 150 ----------------------IV-------VEDAQRLFERMLSKDLVTWTVMIGAYADC 180
Query: 370 QNCEAL--FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDK 427
E+L FD + E EGVV D + +V ++ ACA A+H + + YI+R G +D
Sbjct: 181 NAYESLVLFDRMRE----EGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDV 236
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
L + ++DMY+KCG++ A +F E++++ ++ MIA Y +HG + AI LF ML
Sbjct: 237 ILGTAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSC 296
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEK 547
I P+ VTFV++L A H G +E G ++FNSM ++ + P+ HY CM+DL GRA +L++
Sbjct: 297 AILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDE 356
Query: 548 AIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAA 607
A+ ++++ E+D + + L CR++ ELA +A LL L+ N YV L+N+YA
Sbjct: 357 ALRLIEAMTVEKDERLWSALLGACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAK 416
Query: 608 EGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGE 667
G W ++ + R M K + G +W+ V+++ + F+VGD SHP++ IY +L +
Sbjct: 417 AGKWEKVAKFRDMMTQRKLKKIPGWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLMSLIKK 476
Query: 668 LYEIAG 673
L E+AG
Sbjct: 477 L-EMAG 481
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 113/494 (22%), Positives = 205/494 (41%), Gaps = 114/494 (23%)
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
+ A SLFD +D T++ M+ G+ A G A F E+ + D +T+
Sbjct: 51 IDDAYSLFDGLTMRDSKTWSVMVGGFAKA-GDHAGCYATFRELLRCG--VTPDNYTLPFV 107
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
+ C ++ GR +H ++K + F +SL+DMY+KC E+A R+FE
Sbjct: 108 IRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFE------R 161
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
++SK D V+W +I Y + +A E L LF RM
Sbjct: 162 MLSK---------------------------DLVTWTVMIGAYA-DCNAYESLVLFDRMR 193
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
E GV ++ + ++AC L + A+ + ++++NG + + + ++D+Y KC
Sbjct: 194 EEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKC---- 249
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
G++E AR FD + EKNV+ W+A+ + Y
Sbjct: 250 ---------------------------GSVESAREVFDRMKEKNVISWSAMIAAYGYHGR 282
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
+ DL ++ ++ + + V LL AC+ HA ++ G++
Sbjct: 283 GKDAIDLFHMMLSC-AILPNRVTFVSLLYACS-----------HAGLIEEGLRF------ 324
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
+ + ++ + D+ Y M+ G ++A+ L E M ++
Sbjct: 325 -------------FNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMT---VEK 368
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD-HYACMIDLYGRANQLEKAIE 550
D + A+L A R +E+ EK NS+ ++ P+ HY + ++Y +A + EK +
Sbjct: 369 DERLWSALLGACRIHSKMELAEKAANSLL---ELQPQNPGHYVLLSNIYAKAGKWEKVAK 425
Query: 551 F--------MKSIP 556
F +K IP
Sbjct: 426 FRDMMTQRKLKKIP 439
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 113/259 (43%), Gaps = 45/259 (17%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L+ + H +K GL L+ +Y+K ++ ++++LF+ M +++ +W +I
Sbjct: 116 DLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIG 175
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
A Y + YE +L LF M+ +E + D
Sbjct: 176 A-------------------------------YADCNAYE--SLVLFDRMR--EEGVVPD 200
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
+ + + +N C KL + R + ++V+ +++IDMY+KC E A VF+
Sbjct: 201 KVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFD 260
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPE---LNDAVSWNTLISGYVQNGDAE 241
E+ N+IS +AM+AA G + A+ F L + V++ +L+ G E
Sbjct: 261 RMKEK-NVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIE 319
Query: 242 EGLKLFVRMGENGVRWNEH 260
EGL+ F M W EH
Sbjct: 320 EGLRFFNSM------WEEH 332
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 82/199 (41%), Gaps = 37/199 (18%)
Query: 17 IKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQAR 76
++ G +L I +I +Y+K + +R++FD M E+NV SW+ +I+A
Sbjct: 228 VRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAA----------- 276
Query: 77 SLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLC- 135
GY G DA+ LF M S I + T S L C
Sbjct: 277 ------------------YGY---HGRGKDAIDLFHMMLSC--AILPNRVTFVSLLYACS 313
Query: 136 -VKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
L+ G R ++ + + + ++D+ + +EA R+ E T E +
Sbjct: 314 HAGLIEEGL-RFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERL 372
Query: 195 KNAMVAACCREGEMEMALK 213
+A++ AC +ME+A K
Sbjct: 373 WSALLGACRIHSKMELAEK 391
>gi|225441775|ref|XP_002277828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Vitis vinifera]
Length = 773
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 190/689 (27%), Positives = 326/689 (47%), Gaps = 110/689 (15%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
+ + F N +++ K + L A+S+FD ++ +T+ +++ G++ E+ ++
Sbjct: 110 QNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRNTITWTTLIKGHLQVNDVES-VFRIAR 168
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDM--- 169
EM E +E T + L C L N+ G Q+H F++K D F +SLI M
Sbjct: 169 EMYWVGE--EFNEHTCSVILQACDSLENLVRGEQIHGFVIKRGFDEDVFVGTSLISMYSR 226
Query: 170 ----------------------------YSKCRCYEEACRVFE----------------- 184
Y K C E+A VF
Sbjct: 227 CGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEKAIGVFLHLLGSGLEPNDYTFTNV 286
Query: 185 -----------------------GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPEL 221
GC +E+++ NA+V+ + G +E A K+F E
Sbjct: 287 ISACNGDIDVEVLRVLHGMCIKCGCGDEISV--GNAIVSVYVKHGMLEEAEKSFCGMGER 344
Query: 222 NDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEI 281
N VSW L+SGYV+NG+ ++ L+ F ++ E GV ++ FA+ L C +N+ +I
Sbjct: 345 N-LVSWTALLSGYVKNGNGKKALEGFSQILELGVGFDSCCFATLLDGCSECKNLGLGLQI 403
Query: 282 HSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNM 341
H +V+K G + + V + ++D+Y KC +
Sbjct: 404 HGFVVKLGYVHDVSVGTALIDLYAKCRKL------------------------------- 432
Query: 342 EEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGA 401
AR F SL +KN+V + A+ SGY+ A +A+ L S+ + + D++ LL
Sbjct: 433 RSARLVFHSLLDKNIVSFNAILSGYIGADEEDAM-ALFSQLRLAD-IKPDSVTFARLLSL 490
Query: 402 CALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLY 461
A QA L GK +HAYI++ G + + + + ++ MY+KCG++ A +F + D + +
Sbjct: 491 SADQACLVKGKCLHAYIIKTGFEANPSVGNAVITMYAKCGSIGDACQLFYSMNYLDSISW 550
Query: 462 NVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTA 521
N +I+ YA HG KA++LFEEM ++ PD +T +++L A + G +E G FN M +
Sbjct: 551 NAVISAYALHGQGRKALILFEEMKKEEFVPDEITILSVLQACSYSGLLEEGFCLFNDMES 610
Query: 522 DYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAG 581
Y I PE +H+ACM+DL GRA L +A+ F+ P ++ + ++VC+L+ +
Sbjct: 611 KYGIKPEIEHFACMVDLLGRAGYLSEAMSFINRSPFSGSPLLWRTLVHVCKLHGDLNFGQ 670
Query: 582 EAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEI 641
A + LL L Y+ ++N+YA G E R+R M +K ++ AG SW+ +++++
Sbjct: 671 IASKHLLDLAPEEAGSYILVSNLYAGGGMLNEAARVRTVMNDLKVSKEAGSSWIEIDNKV 730
Query: 642 HIFTVGDVSHPKTNAIYSVLAIFTGELYE 670
H F D HP++ IY+ L + E+ +
Sbjct: 731 HQFVASDKDHPESKEIYAKLDLLKSEMKQ 759
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 104/448 (23%), Positives = 185/448 (41%), Gaps = 107/448 (23%)
Query: 11 ICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSH 70
+ H IK G N ++ +Y KH +L E+ K F M ERN+ SW ++S +K+
Sbjct: 301 VLHGMCIKCGCGDEISVGNAIVSVYVKHGMLEEAEKSFCGMGERNLVSWTALLSGYVKNG 360
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
+ K+A EG+ Q + + D +
Sbjct: 361 NGKKA------------------------LEGFS----------QILELGVGFDSCCFAT 386
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L+ C + N+G G Q+H F+VK ++LID+Y+KCR A VF
Sbjct: 387 LLDGCSECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARLVFH------ 440
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
+L+ KN VS+N ++SGY+ D E+ + LF ++
Sbjct: 441 SLLDKN---------------------------IVSFNAILSGYI-GADEEDAMALFSQL 472
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
++ + TFA LS + K +H++++K G +NP V + ++ +Y KC
Sbjct: 473 RLADIKPDSVTFARLLSLSADQACLVKGKCLHAYIIKTGFEANPSVGNAVITMYAKC--- 529
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY-VKA 369
G++ +A + F S+ + + W A+ S Y +
Sbjct: 530 ----------------------------GSIGDACQLFYSMNYLDSISWNAVISAYALHG 561
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI-LRMGVQMDKK 428
Q +AL +L E + KE V D + ++ +L AC+ L G + + + G++ + +
Sbjct: 562 QGRKAL--ILFEEMKKEEFVPDEITILSVLQACSYSGLLEEGFCLFNDMESKYGIKPEIE 619
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIER 456
+ +VD+ + G ++ A +FI R
Sbjct: 620 HFACMVDLLGRAGYLSEA----MSFINR 643
Score = 42.0 bits (97), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 68/174 (39%), Gaps = 40/174 (22%)
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
G+ IHA++ ++G Q D + LV++Y K + A+ +F + R+ + + +I +
Sbjct: 97 GQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRNTITWTTLIKGHLQ 156
Query: 471 HGHEEKAILLFEEM-----------------------------------LEKGIKPDAVT 495
E + EM +++G D
Sbjct: 157 VNDVESVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRGEQIHGFVIKRGFDEDVFV 216
Query: 496 FVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
+++S + CG + EK ++++ YK + MI YG+A EKAI
Sbjct: 217 GTSLISMYSRCGDLGAAEKVYSNLA--YK---DVRCLNFMISEYGKAGCGEKAI 265
>gi|449451309|ref|XP_004143404.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
gi|449526377|ref|XP_004170190.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 577
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 178/538 (33%), Positives = 281/538 (52%), Gaps = 13/538 (2%)
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
C++ ++ G LH+ ++KT+ F + LIDMYSKC E A + F+ N+ S
Sbjct: 21 CIQHKHLRVGMSLHSHLIKTALSFDLFLANRLIDMYSKCNSMENAQKAFDDLPIR-NIHS 79
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
N ++A+ R G A K F P N VS+NTLIS + +G E + +F +M ++
Sbjct: 80 WNTILASYSRAGFFSQARKVFDEMPHPN-IVSYNTLISSFTHHGLYVESMNIFRQMQQDF 138
Query: 255 --VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+ +E T S C L ++ +++H + GL N V + IVD Y KC + +
Sbjct: 139 DLLALDEITLVSIAGTCACLGALEFLRQVHGAAIVIGLEFNMIVCNAIVDAYGKCGDPDA 198
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
+ S+ R+ + +SM+V Y+ +++A R F + KNV WTAL + VK +
Sbjct: 199 SYSIFSRMKERDVVTWTSMVVAYNQTSRLDDAFRVFSCMPVKNVHTWTALINALVKNKYS 258
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK---L 429
DL + + +E +A V +L ACA A + GKEIH I+R +++ +
Sbjct: 259 NEALDLFQQML-EEKTSPNAFTFVGVLSACADLALIAKGKEIHGLIIRRSSELNFPNVYV 317
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+ L+D+YSK G++ A ++F +E+D+V +N +I +A +G +A+L F +M E GI
Sbjct: 318 CNALIDLYSKSGDVKSARMLFNLILEKDVVSWNSLITGFAQNGLGREALLAFRKMTEVGI 377
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
+P+ VTF+A+LSA H G G M Y I P +HYA MID++GR N+L +A+
Sbjct: 378 RPNKVTFLAVLSACSHTGLSSEGLCILELMEKFYDIEPSLEHYAVMIDMFGRENRLAEAL 437
Query: 550 EFMKSIPTEEDAV-ILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAE 608
+ + P V I G+ L CR++ N +LA A E L +E +N RYV L+NV+AA
Sbjct: 438 DLISRAPNGSKHVGIWGAVLGACRIHENLDLAIRAAETLFEMEPDNAGRYVMLSNVFAAA 497
Query: 609 GNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIF 664
W + +RK M RG K C + + + H F D SH + IY ++ I
Sbjct: 498 SRWMDAHNVRKLMEERGFKKEVAYSC--IEIRNIRHKFVARDNSHSQMGEIYELMFIL 553
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 200/400 (50%), Gaps = 34/400 (8%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L+ + H IK L+ N+LI +YSK N + ++K FD++P RN+ SWNTI++
Sbjct: 26 HLRVGMSLHSHLIKTALSFDLFLANRLIDMYSKCNSMENAQKAFDDLPIRNIHSWNTILA 85
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
+ ++ QAR +FD PH ++V+YN+++ + + G +++ +F +MQ + + +D
Sbjct: 86 SYSRAGFFSQARKVFDEMPHPNIVSYNTLISSFTH-HGLYVESMNIFRQMQQDFDLLALD 144
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
E T+ S C L + F RQ+H + + + ++++D Y KC + + +F
Sbjct: 145 EITLVSIAGTCACLGALEFLRQVHGAAIVIGLEFNMIVCNAIVDAYGKCGDPDASYSIFS 204
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
E ++++ +MV A + ++ A + F P + + +W LI+ V+N + E L
Sbjct: 205 RMKER-DVVTWTSMVVAYNQTSRLDDAFRVFSCMP-VKNVHTWTALINALVKNKYSNEAL 262
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
LF +M E N TF LSAC L + KEIH +++
Sbjct: 263 DLFQQMLEEKTSPNAFTFVGVLSACADLALIAKGKEIHGLIIR----------------- 305
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
+ +N+ N + +++I YS G+++ AR F+ + EK+VV W +L +
Sbjct: 306 -RSSELNFP----------NVYVCNALIDLYSKSGDVKSARMLFNLILEKDVVSWNSLIT 354
Query: 365 GYVKAQNCEALFDLLS-EFVTKEGVVTDALILVILLGACA 403
G+ AQN LL+ +T+ G+ + + + +L AC+
Sbjct: 355 GF--AQNGLGREALLAFRKMTEVGIRPNKVTFLAVLSACS 392
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 157/349 (44%), Gaps = 53/349 (15%)
Query: 263 ASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGV 322
A S C ++++ +HS ++K L + F+++ ++D+Y KC +M A+ +
Sbjct: 15 ARLFSKCIQHKHLRVGMSLHSHLIKTALSFDLFLANRLIDMYSKCNSMENAQKAFDDLPI 74
Query: 323 RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG------YVKAQNC---- 372
RN S ++++ YS G +AR+ FD + N+V + L S YV++ N
Sbjct: 75 RNIHSWNTILASYSRAGFFSQARKVFDEMPHPNIVSYNTLISSFTHHGLYVESMNIFRQM 134
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
+ FDLL+ D + LV + G CA AL +++H + +G++ + + +
Sbjct: 135 QQDFDLLA---------LDEITLVSIAGTCACLGALEFLRQVHGAAIVIGLEFNMIVCNA 185
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACY------------------------ 468
+VD Y KCG+ + IF ERD+V + M+ Y
Sbjct: 186 IVDAYGKCGDPDASYSIFSRMKERDVVTWTSMVVAYNQTSRLDDAFRVFSCMPVKNVHTW 245
Query: 469 -------AHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTA 521
+ + +A+ LF++MLE+ P+A TFV +LSA + G++ +
Sbjct: 246 TALINALVKNKYSNEALDLFQQMLEEKTSPNAFTFVGVLSACADLALIAKGKEIHGLIIR 305
Query: 522 DYKISPETDHYAC--MIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFL 568
+ Y C +IDLY ++ ++ A + ++ E+D V S +
Sbjct: 306 RSSELNFPNVYVCNALIDLYSKSGDVKSA-RMLFNLILEKDVVSWNSLI 353
>gi|356540705|ref|XP_003538826.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g50420-like [Glycine max]
Length = 715
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 206/699 (29%), Positives = 333/699 (47%), Gaps = 114/699 (16%)
Query: 41 LRESRKLF-------DEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSM 93
LRE+R+L ++ F +N I+S + L + +FD P + +V+YN++
Sbjct: 26 LREARQLHALILTTTTAFTSQSPFVYNNILSMYARCGSLTDSHLVFDKMPRRTIVSYNAL 85
Query: 94 LCGYINAEGYEA-DALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMV 152
L Y A A AL+L+ +M + +R T TS L L + FG LHA
Sbjct: 86 LAAYSRASPNHAISALELYTQMVT--NGLRPSSTTFTSLLQASSLLEHWWFGSSLHAKGF 143
Query: 153 KT---------------SN---------------DASGFAVSSLIDMYSKCRCYEEA--- 179
K SN D A +SLI Y K EE
Sbjct: 144 KLGLNDICLQTSLLNMYSNCGDLSSAELVFWDMVDRDHVAWNSLIMGYLKNNKIEEGIWL 203
Query: 180 ----------------CRVFEGCTE-------------------EVNLISKNAMVAACCR 204
C V C+ ++L +NA+V C
Sbjct: 204 FIKMMSVGFAPTQFTYCMVLNSCSRLKDYRSGRLIHAHVIVRNVSLDLHLQNALVDMYCN 263
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGV-RWNEHTFA 263
G M+ A + F R E D VSWN++I+GY +N D E+ + LFV++ E + +++T+A
Sbjct: 264 AGNMQTAYRIFSRM-ENPDLVSWNSMIAGYSENEDGEKAMNLFVQLQEMCFPKPDDYTYA 322
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
+SA + K +H+ V+K G + FV S +V +Y K
Sbjct: 323 GIISATGVFPSSSYGKSLHAEVIKTGFERSVFVGSTLVSMYFK----------------- 365
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV 383
+ A R F S++ K+VV+WT + +GY K + + V
Sbjct: 366 --------------NHESDAAWRVFCSISVKDVVLWTEMITGYSKMTDGICAIRCFFQMV 411
Query: 384 TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNM 443
EG D +L ++ ACA A L G+ IH Y +++G ++ + +L+DMY+K G++
Sbjct: 412 -HEGHEVDDYVLSGVVNACANLAVLRQGEIIHCYAVKLGYDVEMSVSGSLIDMYAKNGSL 470
Query: 444 TYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAF 503
A ++F E DL +N M+ Y+HHG E+A+ +FEE+L++G+ PD VTF+++LSA
Sbjct: 471 EAAYLVFSQVSEPDLKCWNSMLGGYSHHGMVEEALQVFEEILKQGLIPDQVTFLSLLSAC 530
Query: 504 RHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVI 563
H VE G+ +N M + + P HY+CM+ L+ RA LE+A E + P ED +
Sbjct: 531 SHSRLVEQGKFLWNYMNS-IGLIPGLKHYSCMVTLFSRAALLEEAEEIINKSPYIEDNLE 589
Query: 564 LG-SFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMR 622
L + L+ C +N+N ++ A E++LRL+ + V L+N+YAA W ++ IR+ MR
Sbjct: 590 LWRTLLSACVINKNFKVGIHAAEEVLRLKAEDGPTLVLLSNLYAAARKWDKVAEIRRNMR 649
Query: 623 GMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
G+ +++ G SW+ +++IH+F+ GD SHPK + +++ L
Sbjct: 650 GLMLDKYPGLSWIEAKNDIHVFSSGDQSHPKADEVHAEL 688
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 102/472 (21%), Positives = 199/472 (42%), Gaps = 73/472 (15%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNV---- 56
+++ ++E + ++ + G T T +++ S+ R R + + RNV
Sbjct: 192 LKNNKIEEGIWLFIKMMSVGFAPTQFTYCMVLNSCSRLKDYRSGRLIHAHVIVRNVSLDL 251
Query: 57 FSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQS 116
N ++ + +++ A +F + DLV++NSM+ GY E E A+ LF+++Q
Sbjct: 252 HLQNALVDMYCNAGNMQTAYRIFSRMENPDLVSWNSMIAGYSENEDGE-KAMNLFVQLQE 310
Query: 117 ADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCY 176
+ D++T ++ + +G+ LHA ++KT + S F S+L+ MY K
Sbjct: 311 MC-FPKPDDYTYAGIISATGVFPSSSYGKSLHAEVIKTGFERSVFVGSTLVSMYFKNHES 369
Query: 177 EEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQ 236
+ A RVF C+ V D V W +I+GY +
Sbjct: 370 DAAWRVF--CSISV-------------------------------KDVVLWTEMITGYSK 396
Query: 237 NGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFV 296
D ++ F +M G +++ + ++AC L ++ + IH + +K G V
Sbjct: 397 MTDGICAIRCFFQMVHEGHEVDDYVLSGVVNACANLAVLRQGEIIHCYAVKLGYDVEMSV 456
Query: 297 SSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNV 356
S ++D+Y K G++E A F ++E ++
Sbjct: 457 SGSLIDMYAK-------------------------------NGSLEAAYLVFSQVSEPDL 485
Query: 357 VVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHA 416
W ++ GY E + E + K+G++ D + + LL AC+ + GK +
Sbjct: 486 KCWNSMLGGYSHHGMVEEALQVFEE-ILKQGLIPDQVTFLSLLSACSHSRLVEQGKFLWN 544
Query: 417 YILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQN--FIERDLVLYNVMIA 466
Y+ +G+ K S +V ++S+ + AE I +IE +L L+ +++
Sbjct: 545 YMNSIGLIPGLKHYSCMVTLFSRAALLEEAEEIINKSPYIEDNLELWRTLLS 596
>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
Length = 1539
Score = 281 bits (719), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 200/645 (31%), Positives = 311/645 (48%), Gaps = 82/645 (12%)
Query: 31 LIHIYSKHNLLRESRKLFDE---------MPERNVFSWNTIISACIKSHDLKQARSLFDS 81
L+ +S+ ++L E R+ E + + V N +++ KS + A S+F+
Sbjct: 861 LLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFEL 920
Query: 82 SPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNV 141
KD V++NS++ G E E DA + F+ M+ FT+ STL+ C L +
Sbjct: 921 MVEKDSVSWNSLISGLDQNECSE-DAAESFLRMRRTGS--MPSNFTLISTLSSCASLGWI 977
Query: 142 GFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAA 201
G Q+H +K D ++L+ +Y++ C+ E
Sbjct: 978 MLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTEC---------------------- 1015
Query: 202 CCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE--EGLKLFVRMGENGVRWNE 259
LK F PE D VSWN++I G + + +A + +K F+ M G +
Sbjct: 1016 ----------LKVFSLMPEY-DQVSWNSVI-GALSDSEASVSQAVKYFLEMMRGGWGLSR 1063
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLL 319
TF + LSA L + + +IH+ VLK L + + + ++ Y KC MN E +
Sbjct: 1064 VTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIF-- 1121
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLL 379
M E R + V W ++ SGY+ + DL+
Sbjct: 1122 -------------------ARMSETR---------DEVSWNSMISGYIHNELLHKAMDLV 1153
Query: 380 SEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
F+ ++G D+ +L ACA A L G E+HA +R ++ D + S LVDMYSK
Sbjct: 1154 -WFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSK 1212
Query: 440 CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAV-TFVA 498
CG + YA F+ R++ +N MI+ YA HGH EKA+ LF M+ G PD V +
Sbjct: 1213 CGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLG 1272
Query: 499 ILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE 558
+LSA H G VE G ++F SM+ Y++SP +H++CM+DL GRA +L++ +F+ S+P +
Sbjct: 1273 VLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMK 1332
Query: 559 EDAVILGSFLNV-CRLN-RNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGR 616
+ +I + L CR N RN EL A E LL LE N YV LAN+YA+ W ++ +
Sbjct: 1333 PNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAK 1392
Query: 617 IRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
R M+ + AGCSWV ++ +H+F GD HP+ + IY L
Sbjct: 1393 ARXAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDXIYDKL 1437
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 126/517 (24%), Positives = 217/517 (41%), Gaps = 104/517 (20%)
Query: 7 KEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISAC 66
+EA H+Q+IK G +N LI+IY + L ++KLFDEM RN+ +W +IS
Sbjct: 561 EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGY 620
Query: 67 IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEF 126
++ +A + F +D+V G+I + +
Sbjct: 621 TQNGKPDEACARF-----RDMVR-----AGFIP------------------------NHY 646
Query: 127 TVTSTLNLCVKLLNVG--FGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
S L C + G G Q+H + KT + + LI MY C
Sbjct: 647 AFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSC----------- 695
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
L S N + R G + +++SWN++IS Y + GD
Sbjct: 696 -------LDSANDARSVFDRIG--------------IRNSISWNSIISVYSRRGDXVSAY 734
Query: 245 KLFVRMGENGV----RWNEHTFASALSACCGLRNVKCA--KEIHSWVLKNGLISNPFVSS 298
LF M + G+ + NE+TF S ++A C + +++ + V K+G + + +V S
Sbjct: 735 DLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYVGS 794
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
+V + + + A+++ GVRN S++ ++VG Q E A + F + K++V
Sbjct: 795 ALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEM--KDLVG 852
Query: 359 WTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
+ + + L SEF L+ G+E+HA++
Sbjct: 853 --------INSDSYVVLLSAFSEF-------------------SVLEEGRRKGREVHAHV 885
Query: 419 LRMGVQMDKKLIST-LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
+R G+ +K I LV+MY+K G + A +F+ +E+D V +N +I+ + E A
Sbjct: 886 IRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDA 945
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
F M G P T ++ LS+ G + +GE+
Sbjct: 946 AESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQ 982
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 141/336 (41%), Gaps = 65/336 (19%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K GL +N L+ +Y++ E K+F MPE + SWN++I A
Sbjct: 984 HCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGA------- 1036
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
L DS E + A+K F+EM + T + L
Sbjct: 1037 -----LSDS-------------------EASVSQAVKYFLEMMRGG--WGLSRVTFINIL 1070
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ L Q+HA ++K ++L+ Y KC
Sbjct: 1071 SAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKC------------------- 1111
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
GEM K F R E D VSWN++ISGY+ N + + L M +
Sbjct: 1112 -------------GEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQ 1158
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G R + TFA+ LSAC + ++ E+H+ ++ + S+ V S +VD+Y KC ++Y
Sbjct: 1159 KGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRIDY 1218
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHF 348
A L +RN +S +SMI GY+ G+ E+A + F
Sbjct: 1219 ASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLF 1254
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 118/443 (26%), Positives = 190/443 (42%), Gaps = 54/443 (12%)
Query: 165 SLIDMYSKCRCYEEACRV--------FEGCTEEVNLISKNAMVAACCREGEMEMALKTFW 216
SLI+ Y C EEA + F G NL N ++ R G++ A K F
Sbjct: 549 SLINRYQGSCCSEEARELHLQSIKYGFVG-----NLFLSNTLINIYVRIGDLGSAQKLFD 603
Query: 217 RQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC--CGLRN 274
N V+W LISGY QNG +E F M G N + F SAL AC G
Sbjct: 604 EMSNRN-LVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSG 662
Query: 275 VKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC-ENMNYAESMLLLKGVRNSFSISSMIV 333
K +IH + K S+ V + ++ +Y C ++ N A S+ G+RNS S +S+I
Sbjct: 663 CKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIIS 722
Query: 334 GYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDAL 393
YS +G+ A F S+ ++ + G+ N E F G + A
Sbjct: 723 VYSRRGDXVSAYDLFSSMQKEGL--------GFSFKPN-EYTF----------GSLITAA 763
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF 453
+ G C L+ L A + + G D + S LV +++ G A+ IF+
Sbjct: 764 CSSVDFGLCVLEQML-------ARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQM 816
Query: 454 IERDLVLYNVMIACYAHHGHEEKAILLFEEMLE-KGIKPDAVTFVAILSAFRHCGSVEMG 512
R++V N ++ E A +F EM + GI D ++V +LSAF +E G
Sbjct: 817 GVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSD--SYVVLLSAFSEFSVLEEG 874
Query: 513 EKYFNSMTADYKISPETDHYAC----MIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFL 568
+ + A + D+ ++++Y ++ + A + + E+D+V S +
Sbjct: 875 RRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFE-LMVEKDSVSWNSLI 933
Query: 569 NVCRLNRNAELAGEAEEKLLRLE 591
+ L++N E + +A E LR+
Sbjct: 934 S--GLDQN-ECSEDAAESFLRMR 953
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 9/108 (8%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L+ + H I+A + + + L+ +YSK + + + F+ MP RNV+SWN++IS
Sbjct: 1181 LERGMEVHACGIRACMESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISG 1240
Query: 66 CIKSHDLKQARSLF-----DSSPHKDLVTYNSML--CGYIN--AEGYE 104
+ ++A LF D P + +L C ++ EG+E
Sbjct: 1241 YARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSACSHVGFVEEGFE 1288
>gi|357118938|ref|XP_003561204.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Brachypodium distachyon]
Length = 618
Score = 281 bits (719), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 187/622 (30%), Positives = 299/622 (48%), Gaps = 89/622 (14%)
Query: 43 ESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFD-SSPHKDLVTYNSMLCGYINAE 101
++R+LFD P+R+V SW +++A L AR+LFD +++VT+ ++L GY A
Sbjct: 53 DARRLFDRTPDRDVVSWTALVAAYACQGMLHDARALFDRPDARRNVVTWTALLSGYARA- 111
Query: 102 GYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGF 161
G +A LF RM E V S
Sbjct: 112 GRVDEAEALFG---------RMPERNVVSW------------------------------ 132
Query: 162 AVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPEL 221
+++++ Y+ +AC +F G + S N ++AA R G ++ A K F R PE
Sbjct: 133 --NTMLEAYTSSGRVGDACTLFNGMPVR-DAGSWNILLAALVRSGNIDKARKLFDRMPER 189
Query: 222 NDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEI 281
N ++W T+++G ++G E LF M E RNV
Sbjct: 190 N-VMAWTTMVAGIARSGSVNEARALFDGMPE--------------------RNVV----- 223
Query: 282 HSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNM 341
SW N +IS Y + ++ A + + R+ S + MI G+ N+
Sbjct: 224 -SW---NAMISG----------YARNHMIDEAHDLFMKMPTRDIASWNIMITGFIQNKNL 269
Query: 342 EEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGA 401
E A+ FD + +NVV WT + +GY+++ E L + + +G+ + + + + A
Sbjct: 270 ERAQELFDKMPRRNVVTWTTMMNGYLQSIQSETALQLFNGMLI-DGIRPNQVTFLGAVDA 328
Query: 402 CALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLY 461
C+ A L G+++H I + Q D + STL+++Y+KCG + A +F E+D++ +
Sbjct: 329 CSNLAGLSEGQQVHQMICKTPFQFDTFIESTLMNLYAKCGEIILARKVFNLSKEKDVISW 388
Query: 462 NVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTA 521
N MIA YAHHG +AI L+E+M E G KP+ VT+V +LSA H G V+ G + F M
Sbjct: 389 NGMIAAYAHHGVGLEAIHLYEKMQENGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVK 448
Query: 522 DYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAG 581
D I+ +HY C+IDL RA +L A + + E + + + L C + N +
Sbjct: 449 DRSIAVRDEHYTCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNALLGGCNSHGNESIGD 508
Query: 582 EAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEH 639
A LL E NN Y L N+YA+ G W E +IR +M RG+K + GCSW+ V +
Sbjct: 509 LAARNLLEAEPNNAGTYTLLCNIYASAGKWKEAAKIRSEMNDRGLK--KQPGCSWIEVAN 566
Query: 640 EIHIFTVGDVSHPKTNAIYSVL 661
++H+F D SH +++ I S+L
Sbjct: 567 KVHVFVSRDKSHSESDLINSLL 588
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/464 (23%), Positives = 207/464 (44%), Gaps = 49/464 (10%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
+T L+ Y++ + E+ LF MPERNV SWNT++ A S + A +LF+ P +
Sbjct: 99 VTWTALLSGYARAGRVDEAEALFGRMPERNVVSWNTMLEAYTSSGRVGDACTLFNGMPVR 158
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR 145
D ++N +L + + G A KLF RM E V + + + G
Sbjct: 159 DAGSWNILLAALVRS-GNIDKARKLF---------DRMPERNVMAWTTMVAGIARSGSVN 208
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
+ A + + + + +++I Y++ +EA +F ++ S N M+ +
Sbjct: 209 EARA-LFDGMPERNVVSWNAMISGYARNHMIDEAHDLFMKMPTR-DIASWNIMITGFIQN 266
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASA 265
+E A + F + P N V+W T+++GY+Q+ +E L+LF M +G+R N+ TF A
Sbjct: 267 KNLERAQELFDKMPRRN-VVTWTTMMNGYLQSIQSETALQLFNGMLIDGIRPNQVTFLGA 325
Query: 266 LSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNS 325
+ AC L + +++H + K + F+ S ++++Y KC
Sbjct: 326 VDACSNLAGLSEGQQVHQMICKTPFQFDTFIESTLMNLYAKC------------------ 367
Query: 326 FSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV-KAQNCEALFDLLSEFVT 384
G + AR+ F+ EK+V+ W + + Y EA+ L E +
Sbjct: 368 -------------GEIILARKVFNLSKEKDVISWNGMIAAYAHHGVGLEAIH--LYEKMQ 412
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILR-MGVQMDKKLISTLVDMYSKCGNM 443
+ G + + V LL AC+ + G I Y+++ + + + + L+D+ S+ G +
Sbjct: 413 ENGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTCLIDLCSRAGRL 472
Query: 444 TYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
A+ + +E ++N ++ HG+E L +LE
Sbjct: 473 GDAKRLIHFLKVEPSSTVWNALLGGCNSHGNESIGDLAARNLLE 516
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 113/256 (44%), Gaps = 28/256 (10%)
Query: 339 GNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVIL 398
G + +ARR FD +++VV WTAL + Y C+ + + + + L
Sbjct: 49 GRVSDARRLFDRTPDRDVVSWTALVAAYA----CQGMLHDARALFDRPDARRNVVTWTAL 104
Query: 399 LGACALQAALHPGKEIHAYILRMGVQMDKKLIS--TLVDMYSKCGNMTYAEIIFQNFIER 456
L A + E A RM ++ ++S T+++ Y+ G + A +F R
Sbjct: 105 LSGYARAGRV---DEAEALFGRMP---ERNVVSWNTMLEAYTSSGRVGDACTLFNGMPVR 158
Query: 457 DLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYF 516
D +N+++A G+ +KA LF+ M E+ + + + +++ GSV F
Sbjct: 159 DAGSWNILLAALVRSGNIDKARKLFDRMPERNV----MAWTTMVAGIARSGSVNEARALF 214
Query: 517 NSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDA---VILGSFLNVCRL 573
+ M +S + MI Y R + +++A + +PT + A +++ F+
Sbjct: 215 DGMPERNVVS-----WNAMISGYARNHMIDEAHDLFMKMPTRDIASWNIMITGFIQ---- 265
Query: 574 NRNAELAGEAEEKLLR 589
N+N E A E +K+ R
Sbjct: 266 NKNLERAQELFDKMPR 281
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 103/255 (40%), Gaps = 39/255 (15%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L E H K T + L+++Y+K + +RK+F+ E++V SWN +I+A
Sbjct: 335 LSEGQQVHQMICKTPFQFDTFIESTLMNLYAKCGEIILARKVFNLSKEKDVISWNGMIAA 394
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
+H G +A+ L+ +MQ + + ++
Sbjct: 395 --YAH------------------------------HGVGLEAIHLYEKMQ--ENGYKPND 420
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDA-SGFAVSSLIDMYSKCRCYEEACRVFE 184
T L+ C V G ++ +MVK + A + LID+ S+ +A R+
Sbjct: 421 VTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTCLIDLCSRAGRLGDAKRLIH 480
Query: 185 GCTEEVNLISKNAMVAACCREGEM---EMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
E + NA++ C G ++A + + E N+A ++ L + Y G +
Sbjct: 481 FLKVEPSSTVWNALLGGCNSHGNESIGDLAARNLL-EAEPNNAGTYTLLCNIYASAGKWK 539
Query: 242 EGLKLFVRMGENGVR 256
E K+ M + G++
Sbjct: 540 EAAKIRSEMNDRGLK 554
>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
Length = 770
Score = 281 bits (719), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 188/681 (27%), Positives = 328/681 (48%), Gaps = 96/681 (14%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPER----NV 56
+R+L+++EA+ + G + + L+H + L +R + M + ++
Sbjct: 58 LRTLDVQEAMT----MLTEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADM 113
Query: 57 FSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGY-INAEGYEADALKLFIEMQ 115
F ++++A ++ + AR LFD P +++VT+ +++ GY +N++ A L++F+EM
Sbjct: 114 FVATSLVNAYMRCGAARDARRLFDGMPERNVVTWTALVTGYTLNSQ--PALGLEVFVEML 171
Query: 116 SADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRC 175
+ +T+ +TLN C+ +V G+Q+H + +K ++ +SL +Y+K
Sbjct: 172 EMGRYP--SHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKL-- 227
Query: 176 YEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYV 235
G ++ AL+ FWR PE N ++W T+IS
Sbjct: 228 ------------------------------GSLDSALRAFWRIPEKN-VITWTTMISACA 256
Query: 236 QNGD-AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
++ + E GL LF+ M +GV NE T S +S C ++ K++ ++ K G +N
Sbjct: 257 EDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNL 316
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
V + + +Y + +G +EA R F+ + +
Sbjct: 317 PVKNSTMYLYLR-------------------------------KGETDEAMRLFEQMEDA 345
Query: 355 NVVVWTALFSGYV------------KAQNCEAL--FDLLSEFVTKEGVVTDALILVILLG 400
+++ W A+ SGY +++ +AL F L V K + T + IL +
Sbjct: 346 SIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSV--- 402
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL 460
C+ AL G++IHA ++ G D + S LV+MY+KCG + A F R V
Sbjct: 403 -CSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVT 461
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
+ MI+ Y+ HG ++AI LFEEM G++P+ +TFV++LSA + G VE E YF+ M
Sbjct: 462 WTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMK 521
Query: 521 ADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELA 580
+Y I P DHY CMID++ R ++E A F+K E + I S + CR + N ELA
Sbjct: 522 KEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELA 581
Query: 581 GEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHE 640
A +KLL L+ Y+ L N+Y + W ++ R+RK M+ SW+ ++ +
Sbjct: 582 FYAADKLLELKPKGIETYILLLNMYISTERWQDVARVRKLMKQEDVGILRDRSWITIKDK 641
Query: 641 IHIFTVGDVSHPKTNAIYSVL 661
++ F D +HP+ +Y +L
Sbjct: 642 VYFFRANDRTHPQATELYQLL 662
>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
Length = 702
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 200/666 (30%), Positives = 311/666 (46%), Gaps = 106/666 (15%)
Query: 13 HVQAIKAGL--TLTTITTNQLIHIYSKHNLLRESRKLF-DEMPER-NVFSWNTIISACIK 68
H A+K GL N L+ +Y++ L+ ++++LF P R +V +WNT++S ++
Sbjct: 37 HAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQ 96
Query: 69 SHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
S +FD +A++ +M + +R D T
Sbjct: 97 S-------GMFD-------------------------EAVQTLYDMVALG--VRPDGVTF 122
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSN-DASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
S L C +L + GR++HA+++K A+ F S+L+DMY+ +A +VF+
Sbjct: 123 ASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFD--- 179
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
MV ++ M WN +I GY Q G EE L+LF
Sbjct: 180 ----------MVPDSGKQLGM------------------WNAMICGYAQAGMDEEALRLF 211
Query: 248 VRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
RM E G E T AS L AC + +H +V+K G+ N FV + ++D+Y +
Sbjct: 212 ARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYAR 271
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
G + ARR F + +VV W L +G
Sbjct: 272 L-------------------------------GKTDVARRIFAMVDLPDVVSWNTLITGC 300
Query: 367 VKAQNCEALFDLLSEFVTKE--GVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
V + F L E E GVV +A+ L+ LL CA+ AA GKEIH Y +R +
Sbjct: 301 VVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALD 360
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
D + S LVDMY+KCG + + +F R+ + +NV+I Y HG +A +LF+ M
Sbjct: 361 TDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRM 420
Query: 485 LEKG-IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRAN 543
G +P+ VTF+A L+A H G V+ G + F++M D+ + P D AC++D+ GRA
Sbjct: 421 TASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAG 480
Query: 544 QLEKAIEFMKSIPTEEDAV-ILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLA 602
+L++A + S+ E V + L CRL+RN L A E+LL LE + YV L
Sbjct: 481 RLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLC 540
Query: 603 NVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLA 662
N+Y+A G W +R +MR + GCSW+ V+ IH F G+ +HP + +++ +
Sbjct: 541 NIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHME 600
Query: 663 IFTGEL 668
GE+
Sbjct: 601 ALWGEM 606
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 110/240 (45%), Gaps = 17/240 (7%)
Query: 403 ALQAALHPGKEIHAYILRMGVQMDKKLIS--TLVDMYSKCGNMTYAEIIFQNFI--ERDL 458
A AA+ G+E HA+ L+ G+ + + L+ MY++ G + A+ +F D+
Sbjct: 25 AAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDV 84
Query: 459 VLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNS 518
V +N M++ G ++A+ +M+ G++PD VTF + L A +++G +
Sbjct: 85 VTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAY 144
Query: 519 MTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE------DAVILG---SFLN 569
+ D +++ + + ++D+Y Q+ KA + +P +A+I G + ++
Sbjct: 145 VIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMD 204
Query: 570 VCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRF 629
L A + EAE + E + A A G A G + K RGM GNRF
Sbjct: 205 EEALRLFARM--EAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVK--RGMAGNRF 260
>gi|347954458|gb|AEP33729.1| chlororespiratory reduction 21, partial [Brassica rapa]
Length = 788
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 191/700 (27%), Positives = 330/700 (47%), Gaps = 112/700 (16%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H K+GL + L +Y K +L ++RK+FDE+PERNV +W
Sbjct: 152 HGYVAKSGLDDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAW------------- 198
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
N+++ GY+ G +A++L +M+ +E + TV++ L
Sbjct: 199 ------------------NALMVGYVQ-NGMNEEAIRLMCDMR--EEGVEPTRVTVSTCL 237
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ + V G+Q HA V + +S+++ Y K E A VF+ +
Sbjct: 238 SASANMGGVEEGKQSHALAVVNGLELDNILGTSVLNFYCKVGLVEYAEMVFD------RM 291
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+ K D V+WN LISGYVQ G E+ +++ M
Sbjct: 292 VGK---------------------------DVVTWNLLISGYVQQGLVEDAIRMCKLMRL 324
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM-- 310
++++ T ++ +S +N K KE+ + +++ S+ ++S VD+Y KC ++
Sbjct: 325 EKLKFDCVTLSTLMSTAARTQNSKLGKEVQCYCIRHSFESDIVLASTAVDMYAKCGSIVD 384
Query: 311 ---------------------NYAESMLLLKGVRNSF-----SISSMIVGYSL------- 337
YAES L + +R + S+ ++ ++L
Sbjct: 385 AKKVFDSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSLLR 444
Query: 338 QGNMEEARRHFDSLTE----KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDAL 393
G ++EA++ F + +V WT + +G V+ E L + + + G+ +
Sbjct: 445 NGQVDEAKKMFLQMQSSGIVPTIVSWTTMMNGLVQNGCSEEAIHYLRK-MQEYGMRPNVF 503
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST-LVDMYSKCGNMTYAEIIFQN 452
+ + L ACA A+LH G+ +H YI+R + I T LVDMY+KCG+++ AE +F+
Sbjct: 504 SITVALSACANLASLHFGRSVHGYIIRNRLHSSSVSIETSLVDMYAKCGDISKAEKVFRR 563
Query: 453 FIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMG 512
+ +L LYN MI+ YA +G+ E+A+ L+ + + GIKPD +TF ILSA H G +
Sbjct: 564 KLFSELPLYNAMISAYALYGNVEEAMALYRSLDDMGIKPDNITFTNILSACNHAGDINQA 623
Query: 513 EKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCR 572
+ F+ M + + + P +HY M+DL A + EKA+ M+ +P E DA ++ S L C
Sbjct: 624 IEIFSDMVSKHGVKPCLEHYGLMVDLLASAGETEKALRLMEEMPYEPDARMIQSLLATCN 683
Query: 573 LNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGC 632
EL ++LL E +N YV ++N YA EG+W E+ ++R+ M+ + GC
Sbjct: 684 KEHKTELVEYLSKQLLESEPDNSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKQPGC 743
Query: 633 SWVYVEH----EIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
SW+ V+ E+ +F D +H + N I +LA+ ++
Sbjct: 744 SWIRVKREEEEEVQVFVANDKTHLRNNEIRRMLALLLNDM 783
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 145/526 (27%), Positives = 229/526 (43%), Gaps = 100/526 (19%)
Query: 30 QLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVT 89
+L+ Y+K + L + LF ++ RNVFSW II
Sbjct: 68 KLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIG------------------------- 102
Query: 90 YNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHA 149
+ C EG AL F+EM + I D F V + C L GFGR +H
Sbjct: 103 ---VKCRMGLVEG----ALMGFVEM--LKDEIFPDNFVVPNVCKACGALQWRGFGRGVHG 153
Query: 150 FMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEME 209
++ K+ D F SSL DMY KC ++A +VF+
Sbjct: 154 YVAKSGLDDCVFVASSLADMYGKCGVLDDARKVFD------------------------- 188
Query: 210 MALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
PE N V+WN L+ GYVQNG EE ++L M E GV T ++ LSA
Sbjct: 189 -------EIPERN-VVAWNALMVGYVQNGMNEEAIRLMCDMREEGVEPTRVTVSTCLSAS 240
Query: 270 CGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSIS 329
+ V+ K+ H+ + NGL + + + +++ YCK + YAE +
Sbjct: 241 ANMGGVEEGKQSHALAVVNGLELDNILGTSVLNFYCKVGLVEYAEMV------------- 287
Query: 330 SMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVV 389
FD + K+VV W L SGYV+ E + + + E +
Sbjct: 288 ------------------FDRMVGKDVVTWNLLISGYVQQGLVEDAIR-MCKLMRLEKLK 328
Query: 390 TDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEII 449
D + L L+ A GKE+ Y +R + D L ST VDMY+KCG++ A+ +
Sbjct: 329 FDCVTLSTLMSTAARTQNSKLGKEVQCYCIRHSFESDIVLASTAVDMYAKCGSIVDAKKV 388
Query: 450 FQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSV 509
F + +++DL+L+N ++A YA G +A+ LF EM + + P+ +T+ I+ + G V
Sbjct: 389 FDSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQV 448
Query: 510 EMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSI 555
+ +K F M + I P + M++ + E+AI +++ +
Sbjct: 449 DEAKKMFLQMQSS-GIVPTIVSWTTMMNGLVQNGCSEEAIHYLRKM 493
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 122/534 (22%), Positives = 236/534 (44%), Gaps = 90/534 (16%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
++E H A+ GL L I +++ Y K L+ + +FD M ++V +WN +IS
Sbjct: 246 VEEGKQSHALAVVNGLELDNILGTSVLNFYCKVGLVEYAEMVFDRMVGKDVVTWNLLIS- 304
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
GY+ +G DA+++ M+ E ++ D
Sbjct: 305 ------------------------------GYVQ-QGLVEDAIRMCKLMRL--EKLKFDC 331
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
T+++ ++ + N G+++ + ++ S ++ S+ +DMY+KC +A +VF+
Sbjct: 332 VTLSTLMSTAARTQNSKLGKEVQCYCIRHSFESDIVLASTAVDMYAKCGSIVDAKKVFDS 391
Query: 186 CTEE----------------------------------VNLISKNAMVAACCREGEMEMA 211
++ N+I+ N ++ + R G+++ A
Sbjct: 392 TVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVDEA 451
Query: 212 LKTFWRQPE---LNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSA 268
K F + + VSW T+++G VQNG +EE + +M E G+R N + ALSA
Sbjct: 452 KKMFLQMQSSGIVPTIVSWTTMMNGLVQNGCSEEAIHYLRKMQEYGMRPNVFSITVALSA 511
Query: 269 CCGLRNVKCAKEIHSWVLKNGLISNPF-VSSGIVDVYCKCENMNYAESMLLLKGVRNSFS 327
C L ++ + +H ++++N L S+ + + +VD+Y KC +++ AE + K
Sbjct: 512 CANLASLHFGRSVHGYIIRNRLHSSSVSIETSLVDMYAKCGDISKAEKVFRRKLFSELPL 571
Query: 328 ISSMIVGYSLQGNMEEARRHFDSLTEKNV----VVWTALFSGYVKAQNCEALFDLLSEFV 383
++MI Y+L GN+EEA + SL + + + +T + S A + ++ S+ V
Sbjct: 572 YNAMISAYALYGNVEEAMALYRSLDDMGIKPDNITFTNILSACNHAGDINQAIEIFSDMV 631
Query: 384 TKEGVVT----DALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
+K GV L++ +L A + AL +E M + D ++I +L+ +K
Sbjct: 632 SKHGVKPCLEHYGLMVDLLASAGETEKALRLMEE-------MPYEPDARMIQSLLATCNK 684
Query: 440 CGNMTYAEIIFQNFIERDLV---LYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
E + + +E + Y + YA G ++ + + E M KG+K
Sbjct: 685 EHKTELVEYLSKQLLESEPDNSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLK 738
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 177/411 (43%), Gaps = 69/411 (16%)
Query: 106 DALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSN--DASGFAV 163
+AL L EM ++R+ L CV + G+Q+HA ++K + + +
Sbjct: 9 EALSLVTEMDF--RNVRIGPEIYGEILQGCVYERDFHTGQQIHARILKNGDFYAKNEYIE 66
Query: 164 SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELND 223
+ L+ Y+KC E A + + + + +
Sbjct: 67 TKLVIFYAKCDALEIA---------------------------------EVLFSKLRVRN 93
Query: 224 AVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHS 283
SW +I + G E L FV M ++ + + + AC L+ + +H
Sbjct: 94 VFSWAAIIGVKCRMGLVEGALMGFVEMLKDEIFPDNFVVPNVCKACGALQWRGFGRGVHG 153
Query: 284 WVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEE 343
+V K+GL FV+S + D+Y KC G +++
Sbjct: 154 YVAKSGLDDCVFVASSLADMYGKC-------------------------------GVLDD 182
Query: 344 ARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACA 403
AR+ FD + E+NVV W AL GYV+ E L+ + + +EGV + + L A A
Sbjct: 183 ARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLMCD-MREEGVEPTRVTVSTCLSASA 241
Query: 404 LQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNV 463
+ GK+ HA + G+++D L +++++ Y K G + YAE++F + +D+V +N+
Sbjct: 242 NMGGVEEGKQSHALAVVNGLELDNILGTSVLNFYCKVGLVEYAEMVFDRMVGKDVVTWNL 301
Query: 464 MIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
+I+ Y G E AI + + M + +K D VT ++S + ++G++
Sbjct: 302 LISGYVQQGLVEDAIRMCKLMRLEKLKFDCVTLSTLMSTAARTQNSKLGKE 352
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 158/384 (41%), Gaps = 67/384 (17%)
Query: 236 QNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG--LISN 293
+NG+ +E L L M VR + L C R+ ++IH+ +LKNG N
Sbjct: 3 KNGEIKEALSLVTEMDFRNVRIGPEIYGEILQGCVYERDFHTGQQIHARILKNGDFYAKN 62
Query: 294 PFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
++ + +V Y KC+ + AE + VRN FS +++I G +E A
Sbjct: 63 EYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRMGLVEGA--------- 113
Query: 354 KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
G+V+ + K+ + D ++ + AC G+
Sbjct: 114 ---------LMGFVE--------------MLKDEIFPDNFVVPNVCKACGALQWRGFGRG 150
Query: 414 IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH 473
+H Y+ + G+ + S+L DMY KCG + A +F ER++V +N ++ Y +G
Sbjct: 151 VHGYVAKSGLDDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGM 210
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKY------------------ 515
E+AI L +M E+G++P VT LSA + G VE G++
Sbjct: 211 NEEAIRLMCDMREEGVEPTRVTVSTCLSASANMGGVEEGKQSHALAVVNGLELDNILGTS 270
Query: 516 ------------FNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE---D 560
+ M D + + + +I Y + +E AI K + E+ D
Sbjct: 271 VLNFYCKVGLVEYAEMVFDRMVGKDVVTWNLLISGYVQQGLVEDAIRMCKLMRLEKLKFD 330
Query: 561 AVILGSFLNVCRLNRNAELAGEAE 584
V L + ++ +N++L E +
Sbjct: 331 CVTLSTLMSTAARTQNSKLGKEVQ 354
>gi|356524477|ref|XP_003530855.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Glycine max]
Length = 529
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 164/509 (32%), Positives = 271/509 (53%), Gaps = 33/509 (6%)
Query: 196 NAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGV 255
N ++AC + +A F N V +N LI G V +E+ L ++ M N V
Sbjct: 14 NQFISACSNLSCINLAASAFANVQNPNVLV-FNALIRGCVHCCYSEQALVHYMHMLRNNV 72
Query: 256 RWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAES 315
++F+S + AC L + + +H V K+G S+ FV + +++ Y ++ +
Sbjct: 73 MPTSYSFSSLIKACTLLVDSAFGEAVHGHVWKHGFDSHVFVQTTLIEFYSTFGDVGGSRR 132
Query: 316 MLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK---AQNC 372
+ R+ F+ ++MI + G+M A R FD + EKNV W A+ GY K A++
Sbjct: 133 VFDDMPERDVFAWTTMISAHVRDGDMASAGRLFDEMPEKNVATWNAMIDGYGKLGNAESA 192
Query: 373 EALF------DLLS---------------------EFVTKEGVVTDALILVILLGACALQ 405
E LF D++S V +G++ D + + ++ ACA
Sbjct: 193 EFLFNQMPARDIISWTTMMNCYSRNKRYKEVIALFHDVIDKGMIPDEVTMTTVISACAHL 252
Query: 406 AALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMI 465
AL GKE+H Y++ G +D + S+L+DMY+KCG++ A ++F ++L +N +I
Sbjct: 253 GALALGKEVHLYLVLQGFDLDVYIGSSLIDMYAKCGSIDMALLVFYKLQTKNLFCWNCII 312
Query: 466 ACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKI 525
A HG+ E+A+ +F EM K I+P+AVTF++IL+A H G +E G ++F SM DY I
Sbjct: 313 DGLATHGYVEEALRMFGEMERKRIRPNAVTFISILTACTHAGFIEEGRRWFMSMVQDYCI 372
Query: 526 SPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEE 585
+P+ +HY CM+DL +A LE A+E ++++ E ++ I G+ LN C+L++N E+A A +
Sbjct: 373 APQVEHYGCMVDLLSKAGLLEDALEMIRNMTVEPNSFIWGALLNGCKLHKNLEIAHIAVQ 432
Query: 586 KLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMK-GNRFAGCSWVYVEHEIHIF 644
L+ LE +N Y L N+YA E W E+ +IR M+ + R G SWV + +H+F
Sbjct: 433 NLMVLEPSNSGHYSLLVNMYAEENRWNEVAKIRTTMKDLGVEKRCPGSSWVEINKTVHLF 492
Query: 645 TVGDVSHPKTNAIYSVLAIFTGELYEIAG 673
D HP + ++ +LA +L +AG
Sbjct: 493 AASDTYHPSYSQLHLLLAELDDQL-RLAG 520
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 160/365 (43%), Gaps = 67/365 (18%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H K G LI YS + SR++FD+MPER+VF+W T+ISA ++ D+
Sbjct: 99 HGHVWKHGFDSHVFVQTTLIEFYSTFGDVGGSRRVFDDMPERDVFAWTTMISAHVRDGDM 158
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGY---INAEGYE------------------------- 104
A LFD P K++ T+N+M+ GY NAE E
Sbjct: 159 ASAGRLFDEMPEKNVATWNAMIDGYGKLGNAESAEFLFNQMPARDIISWTTMMNCYSRNK 218
Query: 105 --ADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFA 162
+ + LF ++ D+ + DE T+T+ ++ C L + G+++H ++V D +
Sbjct: 219 RYKEVIALFHDV--IDKGMIPDEVTMTTVISACAHLGALALGKEVHLYLVLQGFDLDVYI 276
Query: 163 VSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN 222
SSLIDMY+KC G ++MAL F++ +
Sbjct: 277 GSSLIDMYAKC--------------------------------GSIDMALLVFYKL-QTK 303
Query: 223 DAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIH 282
+ WN +I G +G EE L++F M +R N TF S L+AC ++ +
Sbjct: 304 NLFCWNCIIDGLATHGYVEEALRMFGEMERKRIRPNAVTFISILTACTHAGFIEEGRRWF 363
Query: 283 SWVLKNGLISNPFVSSG-IVDVYCKCENMNYAESMLLLKGVR-NSFSISSMIVGYSLQGN 340
++++ I+ G +VD+ K + A M+ V NSF +++ G L N
Sbjct: 364 MSMVQDYCIAPQVEHYGCMVDLLSKAGLLEDALEMIRNMTVEPNSFIWGALLNGCKLHKN 423
Query: 341 MEEAR 345
+E A
Sbjct: 424 LEIAH 428
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 154/334 (46%), Gaps = 36/334 (10%)
Query: 54 RNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIE 113
++ F N ISAC + A S F + + +++ +N+++ G ++ Y AL ++
Sbjct: 8 QDCFLVNQFISACSNLSCINLAASAFANVQNPNVLVFNALIRGCVHC-CYSEQALVHYMH 66
Query: 114 MQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKC 173
M ++ ++ +S + C L++ FG +H + K D+ F ++LI+ YS
Sbjct: 67 MLR--NNVMPTSYSFSSLIKACTLLVDSAFGEAVHGHVWKHGFDSHVFVQTTLIEFYSTF 124
Query: 174 RCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISG 233
+ RVF+ E ++ + M++A R+G+M A + F PE N A +WN +I G
Sbjct: 125 GDVGGSRRVFDDMPER-DVFAWTTMISAHVRDGDMASAGRLFDEMPEKNVA-TWNAMIDG 182
Query: 234 YVQNGDAEEGLKLFVRMG-------------------------------ENGVRWNEHTF 262
Y + G+AE LF +M + G+ +E T
Sbjct: 183 YGKLGNAESAEFLFNQMPARDIISWTTMMNCYSRNKRYKEVIALFHDVIDKGMIPDEVTM 242
Query: 263 ASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGV 322
+ +SAC L + KE+H +++ G + ++ S ++D+Y KC +++ A +
Sbjct: 243 TTVISACAHLGALALGKEVHLYLVLQGFDLDVYIGSSLIDMYAKCGSIDMALLVFYKLQT 302
Query: 323 RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNV 356
+N F + +I G + G +EEA R F + K +
Sbjct: 303 KNLFCWNCIIDGLATHGYVEEALRMFGEMERKRI 336
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 168/555 (30%), Positives = 275/555 (49%), Gaps = 39/555 (7%)
Query: 111 FIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMY 170
FI ++ E+ + S L+ C + +Q+HA +++ + ++ LI M
Sbjct: 28 FIPFPQLQHQRKLLEWRLMSILHDCTLFSQI---KQVHAHIIRNGLSQCSYVLTKLIRML 84
Query: 171 SKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTL 230
+K +V + S +V + Q + W +
Sbjct: 85 TKV---------------DVPMGSYPLLV----------------FGQVNYPNPFLWTAM 113
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSW-VLKNG 289
I GY G E + RM +GV TF++ AC N+ K++H+ +L G
Sbjct: 114 IRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGG 173
Query: 290 LISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFD 349
S+ +V + ++D+Y KC + A + R+ S + +IV Y+ G+ME A FD
Sbjct: 174 FASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFD 233
Query: 350 SLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALH 409
L K++V WTA+ +GY + + + + + G+ TD + L ++ ACA A+
Sbjct: 234 DLPLKDMVAWTAMVTGYAQNGRPKEALEYFQK-MQDVGMETDEVTLAGVISACAQLGAVK 292
Query: 410 PGKEIHAYILRMGVQMDKKLI--STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIAC 467
I R G ++ S L+DMYSKCG+ A +F+ ER++ Y+ MI
Sbjct: 293 HANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILG 352
Query: 468 YAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISP 527
YA HG A+ LF +ML+ I+P+ VTF+ ILSA H G VE G + F M + ++P
Sbjct: 353 YAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAP 412
Query: 528 ETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKL 587
DHYACM+DL GRA LE+A++ +K++P E + + G+ L CR++ N ++A A +L
Sbjct: 413 SPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANEL 472
Query: 588 LRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEH-EIHIFTV 646
+LE N Y+ L+N+YA+ G W E+ ++RK +R + GCSW ++ EIH F
Sbjct: 473 FKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFA 532
Query: 647 GDVSHPKTNAIYSVL 661
GD +HP+++ I L
Sbjct: 533 GDTTHPRSSEIRQAL 547
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 199/434 (45%), Gaps = 34/434 (7%)
Query: 78 LFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVK 137
+F + + + +M+ GY +G +++ + M+ + + FT ++ C
Sbjct: 98 VFGQVNYPNPFLWTAMIRGYA-LQGLLSESTNFYTRMRR--DGVGPVSFTFSALFKACGA 154
Query: 138 LLNVGFGRQLHAFMVKTSNDASGFAV-SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKN 196
LN+ G+Q+HA + AS V +S+ID+Y KC A +VF+ +E +++S
Sbjct: 155 ALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSER-DVVSWT 213
Query: 197 AMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVR 256
++ A + G+ME A F P L D V+W +++GY QNG +E L+ F +M + G+
Sbjct: 214 ELIVAYAKYGDMESASGLFDDLP-LKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGME 272
Query: 257 WNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL--ISNPFVSSGIVDVYCKCENMNYAE 314
+E T A +SAC L VK A I ++G N V S ++D+Y KC + + A
Sbjct: 273 TDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAY 332
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA----- 369
+ + RN FS SSMI+GY++ G A + F + + + F G + A
Sbjct: 333 KVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAG 392
Query: 370 --QNCEALFDLLSEFVTKEGVVTDALILVILLG-ACALQAALHPGKEIHAYILRMGVQMD 426
+ LF + +F +V LLG A L+ AL + M ++ +
Sbjct: 393 LVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALD-------LVKTMPMEPN 445
Query: 427 KKLISTLVDMYSKCGNMTYAEI----IFQ---NFIERDLVLYNVMIACYAHHGHEEKAIL 479
+ L+ GN A+I +F+ N I ++L N+ YA G E+
Sbjct: 446 GGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNI----YASAGRWEEVSK 501
Query: 480 LFEEMLEKGIKPDA 493
L + + EKG K +
Sbjct: 502 LRKVIREKGFKKNP 515
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 128/275 (46%), Gaps = 49/275 (17%)
Query: 3 SLNLKEALICHVQAIK-AGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
+LN+ H Q I G N +I +Y K L +RK+FDEM ER+V SW
Sbjct: 155 ALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTE 214
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I A K D++ A LFD P KD+V + +M+ GY G +AL+ F +MQ D +
Sbjct: 215 LIVAYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQ-NGRPKEALEYFQKMQ--DVGM 271
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV-------SSLIDMYSKCR 174
DE T+ ++ C +L G HA ++ + SGF S+LIDMYSKC
Sbjct: 272 ETDEVTLAGVISACAQL-----GAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCG 326
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
+EA +VFE +E N+ S ++++I GY
Sbjct: 327 SPDEAYKVFE-VMKERNVFS--------------------------------YSSMILGY 353
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
+G A L+LF M + +R N+ TF LSAC
Sbjct: 354 AMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSAC 388
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 189/614 (30%), Positives = 281/614 (45%), Gaps = 84/614 (13%)
Query: 55 NVFSWN-----TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALK 109
N F +N +++ C + AR LFD P ++ +NSM GY +E Y + +
Sbjct: 127 NGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFRGYAQSESYR-EVVF 185
Query: 110 LFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDM 169
LF +M+ D IR + FT L C K+ + G Q+H F++K + F ++LIDM
Sbjct: 186 LFFQMKGMD--IRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDM 243
Query: 170 YSKCRCYEEACRVFEGCTE-EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWN 228
YS +A ++F C E N+++ +M+ ++ A + F PE D V WN
Sbjct: 244 YSAGGTVGDAYKIF--CEMFERNVVAWTSMINGYILSADLVSARRLFDLAPE-RDVVLWN 300
Query: 229 TLISGYVQNGDAEEGLKLFVRMGENGVR-WNEHTFASALSACCGLRNVKCAKEIHSWVLK 287
++SGY++ GD E KLF M V WN VLK
Sbjct: 301 IMVSGYIEGGDMVEARKLFXEMPNRDVMFWNT-------------------------VLK 335
Query: 288 NGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRH 347
Y N+ E + RN FS +++I GY+ G E
Sbjct: 336 G---------------YATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGS 380
Query: 348 FDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAA 407
F + +++ V + LV +L ACA A
Sbjct: 381 FKRM-------------------------------LSESDVPPNDATLVTVLSACARLGA 409
Query: 408 LHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIAC 467
L GK +H Y G++ + + + L+DMY+KCG + A +F+ +DL+ +N +I
Sbjct: 410 LDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGG 469
Query: 468 YAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISP 527
A H A+ LF +M G KPD +TF+ IL A H G VE G YF SM DY I P
Sbjct: 470 LAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMP 529
Query: 528 ETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKL 587
+ +HY CM+D+ RA +LE+A F++ +P E D VI L CR+ +N ELA A ++L
Sbjct: 530 QIEHYGCMVDMLARAGRLEQAXAFVRKMPVEADGVIWAGLLGACRIYKNVELAELALQRL 589
Query: 588 LRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVG 647
+ LE N A YV L+N+Y G W ++ R++ MR + GCS + V + F
Sbjct: 590 IELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPGCSLIEVNDAVVEFYSL 649
Query: 648 DVSHPKTNAIYSVL 661
D HP+ IY VL
Sbjct: 650 DERHPQIEEIYGVL 663
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 110/241 (45%), Gaps = 35/241 (14%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLV 88
N ++ Y + + E+RKLF EMP R+V WNT++ + +++ LF+ P +++
Sbjct: 300 NIMVSGYIEGGDMVEARKLFXEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIF 359
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLH 148
++N+++ GY + G + L F M S + + ++ T+ + L+ C +L + G+ +H
Sbjct: 360 SWNALIGGYAH-NGLFFEVLGSFKRMLS-ESDVPPNDATLVTVLSACARLGALDLGKWVH 417
Query: 149 AFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEM 208
+ + + + ++L+DMY+KC E A VF G
Sbjct: 418 VYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGM---------------------- 455
Query: 209 EMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSA 268
+ D +SWNTLI G + + L LF +M G + + TF L A
Sbjct: 456 -----------DTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCA 504
Query: 269 C 269
C
Sbjct: 505 C 505
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 120/283 (42%), Gaps = 70/283 (24%)
Query: 272 LRNVKCAKEIH---SWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSI 328
+R+ K +K++H + ++ NG N +++ +V + + M Y
Sbjct: 108 MRSCKTSKQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTY---------------- 151
Query: 329 SSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGV 388
AR+ FD + + N+ +W ++F GY ++++ + L + + +
Sbjct: 152 ---------------ARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMD-I 195
Query: 389 VTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEI 448
+ ++L +C AL G+++H ++++ G + + + +TL+DMYS G + A
Sbjct: 196 RPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYK 255
Query: 449 IF-----QNFI--------------------------ERDLVLYNVMIACYAHHGHEEKA 477
IF +N + ERD+VL+N+M++ Y G +A
Sbjct: 256 IFCEMFERNVVAWTSMINGYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEA 315
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
LF EM + D + + +L + G+VE E F M
Sbjct: 316 RKLFXEMPNR----DVMFWNTVLKGYATNGNVEALEGLFEEMP 354
Score = 45.4 bits (106), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 12/169 (7%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
HV A +GL N L+ +Y+K ++ + +F M +++ SWNT+I
Sbjct: 417 HVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRG 476
Query: 73 KQARSLF----DSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
A +LF ++ D +T+ +LC + G D F M AD+++ M +
Sbjct: 477 ADALNLFFQMKNAGQKPDGITFIGILCACTHM-GLVEDGFAYFQSM--ADDYLIMPQIEH 533
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYE 177
+ L G Q AF+ K +A G + L+ CR Y+
Sbjct: 534 YGC--MVDMLARAGRLEQAXAFVRKMPVEADGVIWAGLL---GACRIYK 577
>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
Length = 770
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 187/681 (27%), Positives = 327/681 (48%), Gaps = 96/681 (14%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPER----NV 56
+R L+++EA+ + G + + L+H + L +R + M + ++
Sbjct: 58 LRPLDVQEAMT----MLTEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADM 113
Query: 57 FSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGY-INAEGYEADALKLFIEMQ 115
F ++++A ++ + AR LFD P +++VT+ +++ GY +N++ A L++F+EM
Sbjct: 114 FVATSLVNAYMRCSAARDARRLFDGMPERNVVTWTALVTGYTLNSQ--PALGLEVFVEML 171
Query: 116 SADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRC 175
+ +T+ +TLN C+ +V G+Q+H + +K ++ +SL +Y+K
Sbjct: 172 EMGRYP--SHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKL-- 227
Query: 176 YEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYV 235
G ++ AL+ FWR PE N ++W T+IS
Sbjct: 228 ------------------------------GSLDSALRAFWRIPEKN-VITWTTMISACA 256
Query: 236 QNGD-AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
++ + E G+ LF+ M +GV NE T S +S C ++ K++ ++ K G +N
Sbjct: 257 EDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNL 316
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
V + + +Y + +G +EA R F+ + +
Sbjct: 317 PVKNSTMYLYLR-------------------------------KGETDEAMRLFEQMEDA 345
Query: 355 NVVVWTALFSGYV------------KAQNCEAL--FDLLSEFVTKEGVVTDALILVILLG 400
+++ W A+ SGY +++ +AL F L V K + T + IL +
Sbjct: 346 SIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSV--- 402
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL 460
C+ AL G++IHA ++ G D + S LV+MY+KCG + A F R V
Sbjct: 403 -CSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVT 461
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
+ MI+ Y+ HG ++AI LFEEM G++P+ +TFV++LSA + G VE E YF+ M
Sbjct: 462 WTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMK 521
Query: 521 ADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELA 580
+Y I P DHY CMID++ R ++E A F+K E + I S + CR + N ELA
Sbjct: 522 KEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELA 581
Query: 581 GEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHE 640
A +KLL L+ Y+ L N+Y + W ++ R+RK M+ SW+ ++ +
Sbjct: 582 FYAADKLLELKPKGIETYILLLNMYISTERWQDVARVRKLMKQEDVGILRDRSWITIKDK 641
Query: 641 IHIFTVGDVSHPKTNAIYSVL 661
++ F D +HP+ +Y +L
Sbjct: 642 VYFFRANDRTHPQATELYQLL 662
>gi|449482847|ref|XP_004156421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 833
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 166/537 (30%), Positives = 285/537 (53%), Gaps = 41/537 (7%)
Query: 132 LNLCVKLLNVGFGRQLHAFMVKT---SNDASGFAV-SSLIDMYSKCRCYEEACRVFEGCT 187
L++C + N+ G LHA ++K+ SN +G + +SLI MY +C +A +VF+
Sbjct: 52 LSICGREGNLHLGSSLHASIIKSFELSNHYNGVVIMNSLISMYDRCGKLPDAVKVFDEMV 111
Query: 188 EEVNLISKNAMVAACCREGEM--EMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
+ IS NA++ R G+ + ++ F+ E N ++W +ISG QNG E LK
Sbjct: 112 TR-DTISWNALIGGFVRNGKFFAGLGMQVFYEMGERN-VITWTAVISGLAQNGYHEHSLK 169
Query: 246 LFVRMGENG-VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
LF M G V N T+ S L+AC GL +K +IH ++K G+ S+ + S ++D+Y
Sbjct: 170 LFKEMMSYGSVEPNSLTYLSLLTACSGLEALKEGCQIHGLIMKLGIQSDLCIGSALMDMY 229
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
K G + EA + F+ E ++V T + +
Sbjct: 230 SK-------------------------------SGRIGEAWKIFELAEELDMVSLTVILA 258
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
G+ CE + + K G+ D ++ ++LG +L G+++H+++++
Sbjct: 259 GFTH-NGCEEEAIQIFLKMLKMGIEIDGNVVSVVLGVFGADTSLRLGQQVHSFVVKRNFI 317
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
+ + + L++MYSKCG + + +F ER+ V +N MIA +A HG KA+ L+E+M
Sbjct: 318 CNPFVSNGLINMYSKCGALDESMKVFDRMRERNSVTWNSMIAAFARHGDALKALQLYEDM 377
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
+G KP VTF+++L A H G V+ G ++ SMT D+ ++P ++H+AC++D+ GRA
Sbjct: 378 QLEGAKPTDVTFLSLLHACSHAGLVKKGMEFLKSMTKDHGMNPRSEHHACVVDMLGRAGM 437
Query: 545 LEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANV 604
L +A F++ +P + ++ + L C L ++++ A E L ++ YV LAN+
Sbjct: 438 LSEARNFIEKLPEQPGLLVWQALLGACSLYGDSKIGKYAAEHLFSETPDSPVPYVLLANI 497
Query: 605 YAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
Y++EGNW E R ++M+ + + G SW+ ++ ++H FTVGD HP+T IY VL
Sbjct: 498 YSSEGNWKERARTIRKMKEVGTAKETGISWIEIDKKVHSFTVGDKMHPQTEMIYGVL 554
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 198/435 (45%), Gaps = 76/435 (17%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL--KQARSLFDSSP 83
+ N LI +Y + L ++ K+FDEM R+ SWN +I +++ +F
Sbjct: 85 VIMNSLISMYDRCGKLPDAVKVFDEMVTRDTISWNALIGGFVRNGKFFAGLGMQVFYEMG 144
Query: 84 HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGF 143
++++T+ +++ G + GY +LKLF EM S + + T S L C L +
Sbjct: 145 ERNVITWTAVISG-LAQNGYHEHSLKLFKEMMSYGS-VEPNSLTYLSLLTACSGLEALKE 202
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
G Q+H ++K + S+L+DMYSK EA ++FE EE++++S ++A
Sbjct: 203 GCQIHGLIMKLGIQSDLCIGSALMDMYSKSGRIGEAWKIFE-LAEELDMVSLTVILA--- 258
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
G+ NG EE +++F++M + G+ + + +
Sbjct: 259 -----------------------------GFTHNGCEEEAIQIFLKMLKMGIEIDGNVVS 289
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
L +++ +++HS+V+K I NPFVS+G++++Y KC
Sbjct: 290 VVLGVFGADTSLRLGQQVHSFVVKRNFICNPFVSNGLINMYSKC---------------- 333
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDL-LSEF 382
G ++E+ + FD + E+N V W ++ + + A++ +AL L L E
Sbjct: 334 ---------------GALDESMKVFDRMRERNSVTWNSMIAAF--ARHGDALKALQLYED 376
Query: 383 VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR-MGVQMDKKLISTLVDMYSKCG 441
+ EG + + LL AC+ + G E + + G+ + + +VDM + G
Sbjct: 377 MQLEGAKPTDVTFLSLLHACSHAGLVKKGMEFLKSMTKDHGMNPRSEHHACVVDMLGRAG 436
Query: 442 NMTYAEIIFQNFIER 456
++ A +NFIE+
Sbjct: 437 MLSEA----RNFIEK 447
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 113/286 (39%), Gaps = 58/286 (20%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K +N LI++YSK L ES K+FD M ERN +WN++I+A +
Sbjct: 308 HSFVVKRNFICNPFVSNGLINMYSKCGALDESMKVFDRMRERNSVTWNSMIAAFAR---- 363
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
H D + AL+L+ +MQ E + + T S L
Sbjct: 364 -----------HGDALK-----------------ALQLYEDMQL--EGAKPTDVTFLSLL 393
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS----LIDMYSKCRCYEEACRVFEGCTE 188
+ C + G ++ F+ + D S ++DM + EA E E
Sbjct: 394 HACS---HAGLVKKGMEFLKSMTKDHGMNPRSEHHACVVDMLGRAGMLSEARNFIEKLPE 450
Query: 189 EVNLISKNAMVAACCREGEMEM----ALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
+ L+ A++ AC G+ ++ A F P+ V + L + Y G+ +E
Sbjct: 451 QPGLLVWQALLGACSLYGDSKIGKYAAEHLFSETPD--SPVPYVLLANIYSSEGNWKERA 508
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL 290
+ +M E G + G+ ++ K++HS+ + + +
Sbjct: 509 RTIRKMKEVGT-----------AKETGISWIEIDKKVHSFTVGDKM 543
>gi|125548358|gb|EAY94180.1| hypothetical protein OsI_15952 [Oryza sativa Indica Group]
Length = 655
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 175/630 (27%), Positives = 305/630 (48%), Gaps = 63/630 (10%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
T N ++ ++ +L E+RK+FD MP RN SW +++ + + +AR LF+ P +
Sbjct: 66 FTWNCMVSGLIRNRMLAEARKVFDAMPVRNSVSWAALLTGYARCGRVAEARELFNRIPDR 125
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR 145
++V++N+M+ GY G A +LF D D+ + + ++ +K +V R
Sbjct: 126 NVVSWNAMVSGYAR-NGMVKRARELF------DMMPWRDDVSWLTMISGYIKRKHVREAR 178
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
+L M +S +++ Y A V G + N +S N M+ R
Sbjct: 179 ELFDSMPSPPTSVCNALLSGYVEL-----GYMRAAEVLFGQMQTRNPVSWNVMITGYARA 233
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG-ENGVRWNEHTFAS 264
G M +A + F PE D +S ++ GY+QNG + K+F M + V WN
Sbjct: 234 GSMGIAQRLFDEMPE-KDVLSRTAIMRGYLQNGSVDAAWKVFKDMPHRDTVAWNT----- 287
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
++D + + + ++ A + R+
Sbjct: 288 -----------------------------------MMDGFVRNDRLDDALKLFSEMPDRD 312
Query: 325 SFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVT 384
S +++ GY QG+M+ A F K+ + W L SGY E LLSE +
Sbjct: 313 QISWHAILQGYVQQGDMDSANVWFPRAPNKDAISWNTLISGYKD----EGALSLLSEMI- 367
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
+ G+ D L +++ CA +L GK +H + ++ G + D ++S+L+ MYSKCG ++
Sbjct: 368 RGGLKPDQATLSVVISICASLVSLGCGKMVHLWAIKTGFEHDALVMSSLISMYSKCGLIS 427
Query: 445 YAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR 504
A +F+ ++RD V +N MIA YA+HG ++A+ +F+ M + G +PD TF++ILSA
Sbjct: 428 EASQVFELILQRDTVTWNAMIATYAYHGLADEALKVFDMMTKAGFRPDHATFLSILSACA 487
Query: 505 HCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVIL 564
H G + G +F SM D+ + P +DHY+CM+DL GR+ + +A +F + IP++
Sbjct: 488 HKGYLYEGCYHFRSMQEDWNLVPRSDHYSCMVDLLGRSGFIHQAYDFTRRIPSDHRTTAW 547
Query: 565 GSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQM--R 622
+ + C + +L +L+ ++ Y L+N+YAA+ W+ +R M R
Sbjct: 548 ETLFSACNSHGEIQLGEIIARNVLKARPSDGGMYTLLSNIYAAKEMWSSAASVRGFMKER 607
Query: 623 GMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
G+K + GCSW+ ++ E+ F+ D +HP
Sbjct: 608 GLK--KETGCSWIELKGEVVTFSSNDSNHP 635
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 153/330 (46%), Gaps = 48/330 (14%)
Query: 24 TTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP 83
T N L+ Y + +R + LF +M RN SWN +I+ ++ + A+ LFD P
Sbjct: 188 PTSVCNALLSGYVELGYMRAAEVLFGQMQTRNPVSWNVMITGYARAGSMGIAQRLFDEMP 247
Query: 84 HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGF 143
KD+++ +++ GY+ +A A K+F +M D
Sbjct: 248 EKDVLSRTAIMRGYLQNGSVDA-AWKVFKDMPHRDT------------------------ 282
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
A ++++D + + ++A ++F + + IS +A++
Sbjct: 283 -----------------VAWNTMMDGFVRNDRLDDALKLFSEMPDR-DQISWHAILQGYV 324
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
++G+M+ A F R P DA+SWNTLISGY G L L M G++ ++ T +
Sbjct: 325 QQGDMDSANVWFPRAPN-KDAISWNTLISGYKDEG----ALSLLSEMIRGGLKPDQATLS 379
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
+S C L ++ C K +H W +K G + V S ++ +Y KC ++ A + L R
Sbjct: 380 VVISICASLVSLGCGKMVHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQVFELILQR 439
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
++ + ++MI Y+ G +EA + FD +T+
Sbjct: 440 DTVTWNAMIATYAYHGLADEALKVFDMMTK 469
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 126/245 (51%), Gaps = 40/245 (16%)
Query: 25 TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPH 84
T+ N ++ + +++ L ++ KLF EMP+R+ SW+ I+ ++ D+ A F +P+
Sbjct: 282 TVAWNTMMDGFVRNDRLDDALKLFSEMPDRDQISWHAILQGYVQQGDMDSANVWFPRAPN 341
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
KD +++N+++ GY + EG AL L EM ++ D+ T++ +++C L+++G G
Sbjct: 342 KDAISWNTLISGYKD-EG----ALSLLSEMIRGG--LKPDQATLSVVISICASLVSLGCG 394
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
+ +H + +KT + +SSLI MYSKC EA +VFE + + ++ NAM+A
Sbjct: 395 KMVHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQVFELILQR-DTVTWNAMIAT--- 450
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFAS 264
Y +G A+E LK+F M + G R + TF S
Sbjct: 451 -----------------------------YAYHGLADEALKVFDMMTKAGFRPDHATFLS 481
Query: 265 ALSAC 269
LSAC
Sbjct: 482 ILSAC 486
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 103/267 (38%), Gaps = 66/267 (24%)
Query: 348 FDSLTEKNV-------------------------------VVWTALFSGYVKAQNCEALF 376
FD ++E+NV V W AL +GY +
Sbjct: 57 FDEMSERNVFTWNCMVSGLIRNRMLAEARKVFDAMPVRNSVSWAALLTGYARCGRVAEAR 116
Query: 377 DLLSEFVTKEGVVTDALILVILLGACALQAA----LHPGKE-------IHAYILRMGVQM 425
+L + + V +A++ +A + P ++ I YI R V+
Sbjct: 117 ELFNRIPDRNVVSWNAMVSGYARNGMVKRARELFDMMPWRDDVSWLTMISGYIKRKHVRE 176
Query: 426 DKKLIST-----------LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
++L + L+ Y + G M AE++F R+ V +NVMI YA G
Sbjct: 177 ARELFDSMPSPPTSVCNALLSGYVELGYMRAAEVLFGQMQTRNPVSWNVMITGYARAGSM 236
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA- 533
A LF+EM EK D ++ AI+ + GSV+ K F M P D A
Sbjct: 237 GIAQRLFDEMPEK----DVLSRTAIMRGYLQNGSVDAAWKVFKDM-------PHRDTVAW 285
Query: 534 -CMIDLYGRANQLEKAIEFMKSIPTEE 559
M+D + R ++L+ A++ +P +
Sbjct: 286 NTMMDGFVRNDRLDDALKLFSEMPDRD 312
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 18/175 (10%)
Query: 11 ICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSH 70
+ H+ AIK G + + LI +YSK L+ E+ ++F+ + +R+ +WN +I+
Sbjct: 396 MVHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQVFELILQRDTVTWNAMIATYAYHG 455
Query: 71 DLKQARSLFD----SSPHKDLVTYNSML--CGYINAEGYEADALKLFIEMQSADEHI-RM 123
+A +FD + D T+ S+L C + +GY + F MQ + R
Sbjct: 456 LADEALKVFDMMTKAGFRPDHATFLSILSACAH---KGYLYEGCYHFRSMQEDWNLVPRS 512
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEE 178
D ++ L L GF Q + F + +D A +L +S C + E
Sbjct: 513 DHYSCMVDL-----LGRSGFIHQAYDFTRRIPSDHRTTAWETL---FSACNSHGE 559
>gi|356545955|ref|XP_003541398.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Glycine max]
Length = 667
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 179/642 (27%), Positives = 319/642 (49%), Gaps = 42/642 (6%)
Query: 36 SKHNLLRESRKLFDEMPERNVFSWNTIISACI----KSHDLKQARSLFDSSPHKDLVTYN 91
S H LLR+ ++L + +V N + S I KS+ AR +FD++PH++ T+N
Sbjct: 45 SDHRLLRQGKQLHARLILLSVTPDNFLASKLILFYSKSNHAHFARKVFDTTPHRNTFTWN 104
Query: 92 SMLCGYINAEGYEADALKLFIEMQ-SADEHIRMDEFTVTSTLN-LCVKLLNVGFGRQLHA 149
+ML GY + AL LF S + D FT++ L L + +++H
Sbjct: 105 AMLLGYSFNSMFR-HALNLFGSFTFSTTPNASPDNFTISCVLKALASSFCSPELAKEVHC 163
Query: 150 FMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEME 209
+++ + F +++LI Y +C A VF+G +E
Sbjct: 164 LILRRGLYSDIFVLNALITCYCRCDEVWLARHVFDGMSER-------------------- 203
Query: 210 MALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM-GENGVRWNEHTFASALSA 268
D V+WN +I GY Q +E +L++ M + V N T S + A
Sbjct: 204 -------------DIVTWNAMIGGYSQRRLYDECKRLYLEMLNVSAVAPNVVTAVSVMQA 250
Query: 269 CCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSI 328
C ++ E+H +V ++G+ + +S+ +V +Y KC ++YA M ++ +
Sbjct: 251 CGQSMDLAFGMELHRFVKESGIEIDVSLSNAVVAMYAKCGRLDYAREMFEGMREKDEVTY 310
Query: 329 SSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGV 388
++I GY G +++A F + + +W A+ SG V+ + E +FDL+ + + G+
Sbjct: 311 GAIISGYMDYGLVDDAMGVFRGVENPGLNMWNAVISGMVQNKQFEGVFDLVRQ-MQGSGL 369
Query: 389 VTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEI 448
+A+ L +L + + + L GKE+H Y +R G + + + ++++D Y K G + A
Sbjct: 370 SPNAVTLASILPSFSYFSNLRGGKEVHGYAIRRGYEQNVYVSTSIIDAYGKLGCICGARW 429
Query: 449 IFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGS 508
+F R L+++ +I+ YA HG A+ L+ +ML+KGI+PD VT ++L+A H G
Sbjct: 430 VFDLSQSRSLIIWTSIISAYAAHGDAGLALGLYAQMLDKGIRPDPVTLTSVLTACAHSGL 489
Query: 509 VEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFL 568
V+ FNSM + Y I P +HYACM+ + RA +L +A++F+ +P E A + G L
Sbjct: 490 VDEAWNIFNSMPSKYGIQPLVEHYACMVGVLSRAGKLSEAVQFISEMPIEPSAKVWGPLL 549
Query: 569 NVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNR 628
+ + + E+ A + L +E N Y+ +AN+YA G W + G +R++M+ + +
Sbjct: 550 HGASVFGDVEIGKFACDHLFEIEPENTGNYIIMANLYAHAGKWEQAGEVRERMKVIGLQK 609
Query: 629 FAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYE 670
G SW+ + F DVS+ +++ IY++L G + E
Sbjct: 610 IRGSSWIETSGGLLSFIAKDVSNGRSDEIYALLEGLLGLMRE 651
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 139/324 (42%), Gaps = 37/324 (11%)
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
R+ GV + + SAL C R ++ K++H+ ++ + + F++S ++ Y K
Sbjct: 26 RLSPPGVDFA--AYGSALQHCSDHRLLRQGKQLHARLILLSVTPDNFLASKLILFYSKSN 83
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
+ ++A + RN+F+ ++M++GYS A F S T
Sbjct: 84 HAHFARKVFDTTPHRNTFTWNAMLLGYSFNSMFRHALNLFGSFT---------------- 127
Query: 369 AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHP--GKEIHAYILRMGVQMD 426
F T D + +L A A + P KE+H ILR G+ D
Sbjct: 128 -------------FSTTPNASPDNFTISCVLKALA-SSFCSPELAKEVHCLILRRGLYSD 173
Query: 427 KKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
+++ L+ Y +C + A +F ERD+V +N MI Y+ ++ L+ EML
Sbjct: 174 IFVLNALITCYCRCDEVWLARHVFDGMSERDIVTWNAMIGGYSQRRLYDECKRLYLEMLN 233
Query: 487 -KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQL 545
+ P+ VT V+++ A + G + + + I + ++ +Y + +L
Sbjct: 234 VSAVAPNVVTAVSVMQACGQSMDLAFGME-LHRFVKESGIEIDVSLSNAVVAMYAKCGRL 292
Query: 546 EKAIEFMKSIPTEEDAVILGSFLN 569
+ A E + + E+D V G+ ++
Sbjct: 293 DYAREMFEGM-REKDEVTYGAIIS 315
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 120/268 (44%), Gaps = 36/268 (13%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
+S++L + H ++G+ + +N ++ +Y+K L +R++F+ M E++ ++
Sbjct: 253 QSMDLAFGMELHRFVKESGIEIDVSLSNAVVAMYAKCGRLDYAREMFEGMREKDEVTYGA 312
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
IIS + + A +F + L +N+++ G + + +E L +MQ + +
Sbjct: 313 IISGYMDYGLVDDAMGVFRGVENPGLNMWNAVISGMVQNKQFEG-VFDLVRQMQGSG--L 369
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+ T+ S L N+ G+++H + ++ + + + +S+ID Y K C A
Sbjct: 370 SPNAVTLASILPSFSYFSNLRGGKEVHGYAIRRGYEQNVYVSTSIIDAYGKLGCICGARW 429
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
VF+ ++ +LI W ++IS Y +GDA
Sbjct: 430 VFD-LSQSRSLI--------------------------------IWTSIISAYAAHGDAG 456
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSAC 269
L L+ +M + G+R + T S L+AC
Sbjct: 457 LALGLYAQMLDKGIRPDPVTLTSVLTAC 484
>gi|297810955|ref|XP_002873361.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319198|gb|EFH49620.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 849
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 170/631 (26%), Positives = 321/631 (50%), Gaps = 49/631 (7%)
Query: 42 RESRKLFDEMPERN-----VFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCG 96
R R++ + +R+ VF N+++S ++ +++A SLF KDLV++N ++ G
Sbjct: 244 RSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAG 303
Query: 97 YINAEGYE-ADALKLFIEM-QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKT 154
Y A +E AL+LF + Q D + +D T+ S L +C +L ++ G+++H+++++
Sbjct: 304 Y--ASNHEWLKALQLFHNLVQKGD--VSLDSVTILSILPVCAQLTDLTCGKEIHSYILRH 359
Query: 155 SNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKT 214
S +V NA+++ R G+ A
Sbjct: 360 SYLLEDTSVG-------------------------------NALISFYARFGDTSAAYWA 388
Query: 215 FWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRN 274
F + D +SWN ++ + + + L L + + + T S L C ++
Sbjct: 389 F-SLMSMKDIISWNAILDAFADSPKQFQFLNLLHHLFNEAITLDSVTILSLLKFCTNVQG 447
Query: 275 VKCAKEIHSWVLKNGLISN---PFVSSGIVDVYCKCENMNYAESMLL-LKGVRNSFSISS 330
+ KE+H + +K GL+ N P + + ++D Y KC N+ YA + L R + +S
Sbjct: 448 IGKVKEVHGYSVKAGLLHNEEEPKLGNALLDAYAKCGNVEYAHKIFQGLSERRTLVTYNS 507
Query: 331 MIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVT 390
++ GY G+ ++A+ F ++ ++ W+ + Y ++ + E + G+
Sbjct: 508 LLSGYVNSGSHDDAQMLFSEMSTTDLTTWSLMVRIYAESCFPNEAIGVFRE-IQARGMRP 566
Query: 391 DALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIF 450
+ + ++ LL CA A+LH ++ H YI+R G D +L TL+D+Y+KCG++ +A +F
Sbjct: 567 NTVTIMNLLPVCAQLASLHLVRQCHGYIIR-GRLGDIRLKGTLLDVYAKCGSLKHAYSVF 625
Query: 451 QNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVE 510
Q+ RDLV++ M+A YA HG ++A+++F M++ IKPD V +L+A H G ++
Sbjct: 626 QSDARRDLVMFTAMVAGYAVHGRGKEALMIFSHMIDSNIKPDHVFITTLLTACCHAGLIQ 685
Query: 511 MGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNV 570
G + ++S+ A + + P + YAC +DL R +L+ A F+ +P E +A I G+ L
Sbjct: 686 DGLQIYDSIRAVHGMKPTMEQYACAVDLLARGGRLDDAYSFITQMPVEPNANIWGTLLRA 745
Query: 571 CRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFA 630
C +L LL+ E ++ +V ++N+YAA+ W + +R M+ + + A
Sbjct: 746 CTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPA 805
Query: 631 GCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
GCSW+ V+ + +F GD SHP+ ++I+ ++
Sbjct: 806 GCSWLEVDGKRDVFVSGDCSHPRRDSIFDLV 836
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 117/504 (23%), Positives = 207/504 (41%), Gaps = 116/504 (23%)
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
++++ K + + +F D V +N +L G + G E ++ F M ADE
Sbjct: 61 SVLNMYAKCRRMDDCQKMFRQMDSVDPVVWNIVLTGLSVSCGRET--MRFFKAMHFADEP 118
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK-CRCYEEA 179
+ T L +CV+L + G+ +H++++KT + ++L+ MY+K +A
Sbjct: 119 -KPSSVTFAILLPVCVRLGDSYNGKSMHSYIIKTGLEKDTLVGNALVSMYAKFGYIIPDA 177
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTF---WRQP-ELNDAV---------- 225
F+ ++ +++S NA++A M A ++F ++P E N A
Sbjct: 178 FTAFDDIADK-DVVSWNAIIAGFSENKMMADAFRSFCLMLKEPTEPNYATIANVLPVCAS 236
Query: 226 --------------------SW--------NTLISGYVQNGDAEEGLKLFVRMG-ENGVR 256
SW N+L+S Y++ G EE LF RMG ++ V
Sbjct: 237 MGKNIAYRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVS 296
Query: 257 WN-------------------------------EHTFASALSACCGLRNVKCAKEIHSWV 285
WN T S L C L ++ C KEIHS++
Sbjct: 297 WNVVIAGYASNHEWLKALQLFHNLVQKGDVSLDSVTILSILPVCAQLTDLTCGKEIHSYI 356
Query: 286 LKNG-LISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEA 344
L++ L+ + V + ++ Y + G+ A
Sbjct: 357 LRHSYLLEDTSVGNALISFYARF-------------------------------GDTSAA 385
Query: 345 RRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACAL 404
F ++ K+++ W A+ + + +LL E + D++ ++ LL C
Sbjct: 386 YWAFSLMSMKDIISWNAILDAFADSPKQFQFLNLLHHLF-NEAITLDSVTILSLLKFCTN 444
Query: 405 QAALHPGKEIHAYILRMGV---QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIE-RDLVL 460
+ KE+H Y ++ G+ + + KL + L+D Y+KCGN+ YA IFQ E R LV
Sbjct: 445 VQGIGKVKEVHGYSVKAGLLHNEEEPKLGNALLDAYAKCGNVEYAHKIFQGLSERRTLVT 504
Query: 461 YNVMIACYAHHGHEEKAILLFEEM 484
YN +++ Y + G + A +LF EM
Sbjct: 505 YNSLLSGYVNSGSHDDAQMLFSEM 528
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 161/341 (47%), Gaps = 26/341 (7%)
Query: 23 LTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSS 82
LT +T + IH Y +LR S L D N +IS + D A F
Sbjct: 343 LTDLTCGKEIHSY----ILRHSYLLEDTSVG------NALISFYARFGDTSAAYWAFSLM 392
Query: 83 PHKDLVTYNSMLCGYINAEGYEADALKLF----IEMQSADEHIRMDEFTVTSTLNLCVKL 138
KD++++N++L + AD+ K F + +E I +D T+ S L C +
Sbjct: 393 SMKDIISWNAILDAF-------ADSPKQFQFLNLLHHLFNEAITLDSVTILSLLKFCTNV 445
Query: 139 LNVGFGRQLHAFMVKTS---NDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISK 195
+G +++H + VK N+ ++L+D Y+KC E A ++F+G +E L++
Sbjct: 446 QGIGKVKEVHGYSVKAGLLHNEEEPKLGNALLDAYAKCGNVEYAHKIFQGLSERRTLVTY 505
Query: 196 NAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGV 255
N++++ G + A + + + D +W+ ++ Y ++ E + +F + G+
Sbjct: 506 NSLLSGYVNSGSHDDA-QMLFSEMSTTDLTTWSLMVRIYAESCFPNEAIGVFREIQARGM 564
Query: 256 RWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAES 315
R N T + L C L ++ ++ H ++++ G + + + ++DVY KC ++ +A S
Sbjct: 565 RPNTVTIMNLLPVCAQLASLHLVRQCHGYIIR-GRLGDIRLKGTLLDVYAKCGSLKHAYS 623
Query: 316 MLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNV 356
+ R+ ++M+ GY++ G +EA F + + N+
Sbjct: 624 VFQSDARRDLVMFTAMVAGYAVHGRGKEALMIFSHMIDSNI 664
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 178/426 (41%), Gaps = 75/426 (17%)
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
D + C + + GR LH + K + A S+++MY+KCR ++ ++F
Sbjct: 20 DHRVFLDVVKACASVSELTSGRALHGCVFKLGHIACTEVSKSVLNMYAKCRRMDDCQKMF 79
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
RQ + D V WN +++G + E
Sbjct: 80 ---------------------------------RQMDSVDPVVWNIVLTG-LSVSCGRET 105
Query: 244 LKLFVRMG-ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
++ F M + + + TFA L C L + K +HS+++K GL + V + +V
Sbjct: 106 MRFFKAMHFADEPKPSSVTFAILLPVCVRLGDSYNGKSMHSYIIKTGLEKDTLVGNALVS 165
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
+Y K GY + +A FD + +K+VV W A+
Sbjct: 166 MYAK--------------------------FGYII----PDAFTAFDDIADKDVVSWNAI 195
Query: 363 FSGYVKAQNCEALFDLLSEF--VTKEGVVTDALILVILLGACALQA---ALHPGKEIHAY 417
+G+ ++N + + D F + KE + + +L CA A G++IH+Y
Sbjct: 196 IAGF--SEN-KMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMGKNIAYRSGRQIHSY 252
Query: 418 IL-RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
++ R +Q + ++LV Y + G + A +F +DLV +NV+IA YA + K
Sbjct: 253 VVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNHEWLK 312
Query: 477 AILLFEEMLEKG-IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACM 535
A+ LF +++KG + D+VT ++IL + G++ + + + +T +
Sbjct: 313 ALQLFHNLVQKGDVSLDSVTILSILPVCAQLTDLTCGKEIHSYILRHSYLLEDTSVGNAL 372
Query: 536 IDLYGR 541
I Y R
Sbjct: 373 ISFYAR 378
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 11/140 (7%)
Query: 376 FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVD 435
F LLS F T V D ++ ACA + L G+ +H + ++G ++ ++++
Sbjct: 11 FRLLSGFGTDHRVFLD------VVKACASVSELTSGRALHGCVFKLGHIACTEVSKSVLN 64
Query: 436 MYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVT 495
MY+KC M + +F+ D V++N+++ + E KP +VT
Sbjct: 65 MYAKCRRMDDCQKMFRQMDSVDPVVWNIVLTGLSVSCGRETMRFFKAMHFADEPKPSSVT 124
Query: 496 FVAILSAFRHCGSVEMGEKY 515
F +L V +G+ Y
Sbjct: 125 FAILLPV-----CVRLGDSY 139
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 153/454 (33%), Positives = 246/454 (54%), Gaps = 2/454 (0%)
Query: 220 ELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACC-GLRNVKCA 278
E + V+WN LISG+ + G E FV M G T+ S LSAC G R+V
Sbjct: 83 ECDTPVAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLG 142
Query: 279 KEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQ 338
++H V+ +G++ + V + +VD+Y +C +M A + VR+ S +S++ G +
Sbjct: 143 MQVHGRVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARL 202
Query: 339 GNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVIL 398
G ++EAR FD + E++ V WTA+ GYV A ++ E + V D +V +
Sbjct: 203 GQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFRE-MQYSNVSADEFTMVSV 261
Query: 399 LGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDL 458
+ ACA AL G+ + Y+ R G++MD + + L+DMYSKCG++ A +F+ RD
Sbjct: 262 ITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDK 321
Query: 459 VLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNS 518
+ +I A +G+EE+AI +F M+ PD VTF+ +L+A H G V+ G ++F S
Sbjct: 322 FTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLS 381
Query: 519 MTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAE 578
M Y I+P HY C+IDL GRA ++ +A++ + +P ++ I G+ L CR++ N+E
Sbjct: 382 MIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNSE 441
Query: 579 LAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVE 638
+ E+LL L+ N Y+ L+N+YA W ++ R+R + + GCS + ++
Sbjct: 442 IGELVAERLLELDPENSMVYILLSNIYAKCNRWEDVRRLRHAIMEKGIKKEPGCSLIEMD 501
Query: 639 HEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
IH F GD SHP + IYS L +L +
Sbjct: 502 GIIHEFVAGDQSHPMSKEIYSKLESIISDLNNVG 535
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 123/507 (24%), Positives = 216/507 (42%), Gaps = 78/507 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + + +G+ N L+ +Y++ + + K+FD M R+V SW +++S + +
Sbjct: 146 HGRVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQV 205
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+AR LFD P +D V++ +M+ GY+ A + +AL++F EMQ ++ + DEFT+ S +
Sbjct: 206 DEARDLFDRMPERDTVSWTAMIDGYVWAARFR-EALEMFREMQYSN--VSADEFTMVSVI 262
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C +L + G + +M + F ++LIDMYSKC E A VF+G
Sbjct: 263 TACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHR--- 319
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
D +W +I G NG EE +++F RM
Sbjct: 320 ------------------------------DKFTWTAIILGLAVNGYEEEAIEMFHRMIR 349
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG-IVDVYCKCENMN 311
+E TF L+AC V +E +++ I+ V G I+D+ + +
Sbjct: 350 VSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKIT 409
Query: 312 YA-ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE---KNVVVWTALFSGYV 367
A +++ + NS +++ + GN E + L E +N +V+ L + Y
Sbjct: 410 EALDTIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVAERLLELDPENSMVYILLSNIYA 469
Query: 368 KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ--- 424
K E + L + ++G+ + C+L + IH ++ G Q
Sbjct: 470 KCNRWEDV-RRLRHAIMEKGIKKEP--------GCSL---IEMDGIIHEFV--AGDQSHP 515
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFI-----ERDLVLYNVMIACYAHHGHEEKAIL 479
M K++ S L + S N+ Y + + F+ E+ VLY H EK +
Sbjct: 516 MSKEIYSKLESIISDLNNVGYFPDVTEVFVEVAEKEKKKVLY----------WHSEKLAI 565
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHC 506
F + KP+ T + I+ R C
Sbjct: 566 AFALLSS---KPN--TVIRIVKNLRMC 587
>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Vitis vinifera]
Length = 633
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 186/641 (29%), Positives = 305/641 (47%), Gaps = 103/641 (16%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
+ L L H IK+GL N L+ +Y K L + PE
Sbjct: 71 KVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFK---------LGTDFPE-------- 113
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
R +FD KD++++ SM+ GY+ G ++L+LF +M + +
Sbjct: 114 -------------TRKVFDGLFVKDVISWTSMISGYVRV-GKPMNSLELFWKMLAYG--V 157
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+ FT+++ + C +L ++ GR H ++ D++ S+LIDM+ + ++A +
Sbjct: 158 EPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQ 217
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F+ E DA+ W ++IS +N +
Sbjct: 218 LFDELLEP---------------------------------DAICWTSIISALTRNDFFD 244
Query: 242 EGLKLFVRMG-ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
E L+ F M ++G+ + TF + L+AC L +K KE+H+ V+ G N V S +
Sbjct: 245 EALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSL 304
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
VD+Y KC G++ E++R FD + KN V W+
Sbjct: 305 VDMYGKC-------------------------------GSVGESQRIFDRMPIKNSVSWS 333
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
AL GY + + +++ + F E V D +L CA AA+ GKE+H +R
Sbjct: 334 ALLGGYCQNGDFKSVIQI---FRKMEKV--DLYCFGTILRTCAGLAAVRQGKEVHCQYIR 388
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
G D + S LVD+Y+KCG + YA+ IF R+L+ +N MI +A +G E+A+ +
Sbjct: 389 KGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRI 448
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
F +M+++GIKPD ++F+ IL A H G V+ G +YF SMT DY I +HY+CM+DL G
Sbjct: 449 FNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLG 508
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQ 600
RA LE+A +++ +D+ + + L C N E+A ++++ LE + YV
Sbjct: 509 RAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVMELEPDYHLSYVL 568
Query: 601 LANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEI 641
LANVY A G W + RIR+ M+ N+ G SW+ ++ +
Sbjct: 569 LANVYKAVGRWNDALRIRRLMKDRGVNKMPGKSWIETKNNL 609
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 146/337 (43%), Gaps = 38/337 (11%)
Query: 236 QNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF 295
++G+ L+L + + +AS L C + +IH+ V+K+GL + F
Sbjct: 36 KSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRF 95
Query: 296 VSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKN 355
V + ++ +Y + L + E R+ FD L K+
Sbjct: 96 VGNSLLTLY------------------------------FKLGTDFPETRKVFDGLFVKD 125
Query: 356 VVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIH 415
V+ WT++ SGYV+ +L + + GV +A L ++ AC+ L G+ H
Sbjct: 126 VISWTSMISGYVRVGKPMNSLELFWKMLAY-GVEPNAFTLSAVIKACSELGDLKLGRIFH 184
Query: 416 AYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEE 475
+L G + + S L+DM+ + + A +F +E D + + +I+ + +
Sbjct: 185 GVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFD 244
Query: 476 KAILLFEEM-LEKGIKPDAVTFVAILSAFRHCGSVEMG-EKYFNSMTADYKISPETDHYA 533
+A+ F M + G+ PD TF +L+A + G ++ G E + +T + + + +
Sbjct: 245 EALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVE--S 302
Query: 534 CMIDLYGRANQLEKAIEFMKSIPTEED---AVILGSF 567
++D+YG+ + ++ +P + + +LG +
Sbjct: 303 SLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGY 339
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 189/614 (30%), Positives = 282/614 (45%), Gaps = 84/614 (13%)
Query: 55 NVFSWN-----TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALK 109
N F +N +++ C + AR LFD P ++ +NSM GY +E Y + +
Sbjct: 64 NGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFRGYAQSESYR-EVVF 122
Query: 110 LFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDM 169
LF +M+ D IR + FT L C K+ + G Q+H F++K + F ++LIDM
Sbjct: 123 LFFQMKGMD--IRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDM 180
Query: 170 YSKCRCYEEACRVFEGCTE-EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWN 228
YS +A ++F C E N+++ +M+ ++ A + F PE D V WN
Sbjct: 181 YSAGGTVGDAYKIF--CEMFERNVVAWTSMINGYILSADLVSARRLFDLAPE-RDVVLWN 237
Query: 229 TLISGYVQNGDAEEGLKLFVRMGENGVR-WNEHTFASALSACCGLRNVKCAKEIHSWVLK 287
++SGY++ GD E KLF M V WN VLK
Sbjct: 238 IMVSGYIEGGDMVEARKLFHEMPNRDVMFWNT-------------------------VLK 272
Query: 288 NGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRH 347
Y N+ E + RN FS +++I GY+ G E
Sbjct: 273 G---------------YATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGS 317
Query: 348 FDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAA 407
F + +++ V + LV +L ACA A
Sbjct: 318 FKRM-------------------------------LSESDVPPNDATLVTVLSACARLGA 346
Query: 408 LHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIAC 467
L GK +H Y G++ + + + L+DMY+KCG + A +F+ +DL+ +N +I
Sbjct: 347 LDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGG 406
Query: 468 YAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISP 527
A H A+ LF +M G KPD +TF+ IL A H G VE G YF SM DY I P
Sbjct: 407 LAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMP 466
Query: 528 ETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKL 587
+ +HY CM+D+ RA +LE+A+ F++ +P E D VI L CR+ +N ELA A ++L
Sbjct: 467 QIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGVIWAGLLGACRIYKNVELAELALQRL 526
Query: 588 LRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVG 647
+ LE N A YV L+N+Y G W ++ R++ MR + GCS + V + F
Sbjct: 527 IELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPGCSLIEVNDAVVEFYSL 586
Query: 648 DVSHPKTNAIYSVL 661
D HP+ IY VL
Sbjct: 587 DERHPQIEEIYGVL 600
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 110/241 (45%), Gaps = 35/241 (14%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLV 88
N ++ Y + + E+RKLF EMP R+V WNT++ + +++ LF+ P +++
Sbjct: 237 NIMVSGYIEGGDMVEARKLFHEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIF 296
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLH 148
++N+++ GY + G + L F M S + + ++ T+ + L+ C +L + G+ +H
Sbjct: 297 SWNALIGGYAH-NGLFFEVLGSFKRMLS-ESDVPPNDATLVTVLSACARLGALDLGKWVH 354
Query: 149 AFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEM 208
+ + + + ++L+DMY+KC E A VF G
Sbjct: 355 VYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGM---------------------- 392
Query: 209 EMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSA 268
+ D +SWNTLI G + + L LF +M G + + TF L A
Sbjct: 393 -----------DTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCA 441
Query: 269 C 269
C
Sbjct: 442 C 442
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 122/296 (41%), Gaps = 70/296 (23%)
Query: 256 RWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAES 315
R E F S L +C + K +I + ++ NG N +++ +V + + M Y
Sbjct: 35 RLLEERFISLLQSC---KTSKQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTY--- 88
Query: 316 MLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEAL 375
AR+ FD + + N+ +W ++F GY ++++ +
Sbjct: 89 ----------------------------ARQLFDQIPDPNIALWNSMFRGYAQSESYREV 120
Query: 376 FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVD 435
L + + + + ++L +C AL G+++H ++++ G + + + +TL+D
Sbjct: 121 VFLFFQMKGMD-IRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLID 179
Query: 436 MYSKCGNMTYAEIIF-----QNFI--------------------------ERDLVLYNVM 464
MYS G + A IF +N + ERD+VL+N+M
Sbjct: 180 MYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARRLFDLAPERDVVLWNIM 239
Query: 465 IACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
++ Y G +A LF EM + D + + +L + G+VE E F M
Sbjct: 240 VSGYIEGGDMVEARKLFHEMPNR----DVMFWNTVLKGYATNGNVEALEGLFEEMP 291
Score = 45.8 bits (107), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 12/169 (7%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
HV A +GL N L+ +Y+K ++ + +F M +++ SWNT+I
Sbjct: 354 HVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRG 413
Query: 73 KQARSLF----DSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
A +LF ++ D +T+ +LC + G D F M AD+++ M +
Sbjct: 414 ADALNLFFQMKNAGQKPDGITFIGILCACTHM-GLVEDGFAYFQSM--ADDYLIMPQIEH 470
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYE 177
+ L G Q AF+ K +A G + L+ CR Y+
Sbjct: 471 YGC--MVDMLARAGRLEQAMAFVRKMPVEADGVIWAGLL---GACRIYK 514
>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 846
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 191/599 (31%), Positives = 296/599 (49%), Gaps = 68/599 (11%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
NT+++ K +L AR LF++ P D VT+N ++ GY+ G+ +A LF M SA
Sbjct: 285 NTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQ-NGFTDEAAPLFNAMISAG- 342
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
++ D T S L ++ ++ +++H+++V+ + S+LID+Y
Sbjct: 343 -VKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIY--------- 392
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
F+G G++EMA K F +Q L D +ISGYV +G
Sbjct: 393 ---FKG--------------------GDVEMARKIF-QQNTLVDVAVCTAMISGYVLHGL 428
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
+ + F + + G+ N T AS L AC L +K KE+H +LK L + V S
Sbjct: 429 NIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDILKKQLENIVNVGSA 488
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
I D+Y KC G ++ A F ++E + + W
Sbjct: 489 ITDMYAKC-------------------------------GRLDLAYEFFRRMSETDSICW 517
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
++ S + + E DL + + G D++ L L + A AL+ GKE+H Y++
Sbjct: 518 NSMISSFSQNGKPEMAVDLFRQ-MGMSGAKFDSVSLSSALSSAANLPALYYGKEMHGYVI 576
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
R D + S L+DMYSKCG + A +F ++ V +N +IA Y +HG + +
Sbjct: 577 RNAFSSDTFVASALIDMYSKCGKLALARCVFNLMAGKNEVSWNSIIAAYGNHGCARECLD 636
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
LF EML G+ PD VTF+ I+SA H G V G YF+ MT +Y I +HYACM+DLY
Sbjct: 637 LFHEMLRAGVHPDHVTFLVIISACGHAGLVGEGIHYFHCMTREYGIGARMEHYACMVDLY 696
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYV 599
GRA +L +A + +KS+P DA + G+ L CRL+ N ELA A LL L+ N YV
Sbjct: 697 GRAGRLHEAFDAIKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLLELDPKNSGYYV 756
Query: 600 QLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
L+NV+A G W + ++R+ M+ + G SW+ V H+F+ + +HP++ IY
Sbjct: 757 LLSNVHADAGEWGSVLKVRRLMKEKGVQKIPGYSWIDVNGGTHMFSAAEGNHPESVEIY 815
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 139/545 (25%), Positives = 247/545 (45%), Gaps = 102/545 (18%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
N+ ++ H A G + + LI +Y+ + + ++R++FDE+P+R+ WN ++
Sbjct: 160 NVPLCMVVHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLH 219
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
+KS D A F CG M+++ + ++
Sbjct: 220 GYVKSGDFNNAMGTF---------------CG-----------------MRTS--YSMVN 245
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
T T L++C G Q+H ++ + + ++L+ MYSKC
Sbjct: 246 SVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKC----------- 294
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
G + A K F P+ D V+WN LI+GYVQNG +E
Sbjct: 295 ---------------------GNLFDARKLFNTMPQ-TDTVTWNGLIAGYVQNGFTDEAA 332
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
LF M GV+ + TFAS L + +++ KE+HS+++++ + + ++ S ++D+Y
Sbjct: 333 PLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIY 392
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
K G++E AR+ F T +V V TA+ S
Sbjct: 393 FK-------------------------------GGDVEMARKIFQQNTLVDVAVCTAMIS 421
Query: 365 GYV-KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
GYV N +A+ ++ +EG+V ++L + +L ACA AAL GKE+H IL+ +
Sbjct: 422 GYVLHGLNIDAINTF--RWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDILKKQL 479
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
+ + S + DMY+KCG + A F+ E D + +N MI+ ++ +G E A+ LF +
Sbjct: 480 ENIVNVGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPEMAVDLFRQ 539
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRAN 543
M G K D+V+ + LS+ + ++ G++ + + S +T + +ID+Y +
Sbjct: 540 MGMSGAKFDSVSLSSALSSAANLPALYYGKEMHGYVIRN-AFSSDTFVASALIDMYSKCG 598
Query: 544 QLEKA 548
+L A
Sbjct: 599 KLALA 603
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 151/329 (45%), Gaps = 33/329 (10%)
Query: 220 ELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAK 279
EL +A+ WN +I G G + L + +M + V +++TF + AC GL NV
Sbjct: 106 ELCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCM 165
Query: 280 EIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQG 339
+H+ G + FV S ++ +Y G
Sbjct: 166 VVHNTARSLGFHVDLFVGSALIKLYAD-------------------------------NG 194
Query: 340 NMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILL 399
+ +ARR FD L +++ ++W + GYVK+ + T +V +++ +L
Sbjct: 195 YICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMV-NSVTYTCIL 253
Query: 400 GACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLV 459
CA + G ++H ++ G + D ++ +TLV MYSKCGN+ A +F + D V
Sbjct: 254 SICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTDTV 313
Query: 460 LYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSM 519
+N +IA Y +G ++A LF M+ G+KPD+VTF + L + GS+ K +S
Sbjct: 314 TWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHC-KEVHSY 372
Query: 520 TADYKISPETDHYACMIDLYGRANQLEKA 548
+++ + + +ID+Y + +E A
Sbjct: 373 IVRHRVPFDVYLKSALIDIYFKGGDVEMA 401
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 188/410 (45%), Gaps = 39/410 (9%)
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
V+L +A++ G + A + F P+ D + WN ++ GYV++GD + F
Sbjct: 177 HVDLFVGSALIKLYADNGYICDARRVFDELPQ-RDTILWNVMLHGYVKSGDFNNAMGTFC 235
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
M + N T+ LS C ++H V+ +G +P V++ +V +Y KC
Sbjct: 236 GMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKC- 294
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
GN+ +AR+ F+++ + + V W L +GYV+
Sbjct: 295 ------------------------------GNLFDARKLFNTMPQTDTVTWNGLIAGYVQ 324
Query: 369 AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK 428
+ L + ++ GV D++ L + +L KE+H+YI+R V D
Sbjct: 325 NGFTDEAAPLFNAMIS-AGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVY 383
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
L S L+D+Y K G++ A IFQ D+ + MI+ Y HG AI F ++++G
Sbjct: 384 LKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEG 443
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
+ P+++T ++L A ++++G++ + ++ + + + D+Y + +L+ A
Sbjct: 444 MVPNSLTMASVLPACAALAALKLGKELHCDILKK-QLENIVNVGSAITDMYAKCGRLDLA 502
Query: 549 IEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARY 598
EF + + +E D++ S ++ N E+A + L R G + A++
Sbjct: 503 YEFFRRM-SETDSICWNSMISSFSQNGKPEMAVD----LFRQMGMSGAKF 547
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 102/251 (40%), Gaps = 11/251 (4%)
Query: 314 ESMLLLKGVRNSFSISSMIVG-YSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
+ +++ G+ + ++SS ++G Y L G + + F L N + W + G
Sbjct: 67 HTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLELCNALPWNWMIRGLYML--- 123
Query: 373 EALFDLLSEFVTK---EGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
FD F K V D ++ AC + +H +G +D +
Sbjct: 124 -GWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHNTARSLGFHVDLFV 182
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
S L+ +Y+ G + A +F +RD +L+NVM+ Y G A+ F M
Sbjct: 183 GSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYS 242
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFN-SMTADYKISPETDHYACMIDLYGRANQLEKA 548
++VT+ ILS G +G + + + ++ P+ + ++ +Y + L A
Sbjct: 243 MVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVAN--TLVAMYSKCGNLFDA 300
Query: 549 IEFMKSIPTEE 559
+ ++P +
Sbjct: 301 RKLFNTMPQTD 311
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 166/555 (29%), Positives = 290/555 (52%), Gaps = 63/555 (11%)
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
Q+HA ++KTS D + F ++ L+ R+F AC
Sbjct: 21 QIHALIIKTSLDGNNFVLAKLLR------------RLF-----------------ACSSA 51
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG-ENGVRWNEHTFAS 264
++ A F P D WNT+I Y+ + + +E + LF +M + + + ++ +
Sbjct: 52 NDLLYARSVFDEIPS-PDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSL 110
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESML------- 317
+ AC L++ +++H+ VLK GL S+ FV + ++++Y K ++ A ++L
Sbjct: 111 VIQACGRLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPD 170
Query: 318 -------LLKGVR-----------------NSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
L + VR + S ++MI G++ G++ A++ FD E
Sbjct: 171 LVPYNVLLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCE 230
Query: 354 KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
++++ W+++ + Y KA+ L E + V+ D + +V +L AC AL GK
Sbjct: 231 RDLISWSSMIAAYAKARQSNEALRLFHE-MQLANVLPDKVTMVSVLSACGDVGALGMGKM 289
Query: 414 IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH 473
IH I R +++D KL ++LVDMY+KCG++ + +F RD+ ++ MI A+HG
Sbjct: 290 IHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGF 349
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA 533
E A+ F +M+ + IKP+ VTF+ +LSA H G V+ G YF SM+ Y +SP+ +HY
Sbjct: 350 GELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYG 409
Query: 534 CMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGN 593
C++D+ GRA +L++A+E +KS+P DA++ + L CR+ +N E+A EA LL LE +
Sbjct: 410 CVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEATVNLLELEPH 469
Query: 594 NKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPK 653
YV L+N+Y+ W ++ +R+ M+ + + G S + V++ +H F GD SHP+
Sbjct: 470 VDGNYVLLSNIYSQAKEWDKVVNVRRMMKNINIQKVPGSSSIEVDNAVHEFVAGDQSHPE 529
Query: 654 TNAIYSVLAIFTGEL 668
+ I +L+ T L
Sbjct: 530 SKKILRMLSEITARL 544
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 176/408 (43%), Gaps = 73/408 (17%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIY---SKHNLLRESRKLFDEMPERNVFSWNTI 62
L + + H IK L +L+ S N L +R +FDE+P + F WNT+
Sbjct: 16 LNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSPDTFIWNTM 75
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
I A + S + +++ SLF H+ E I
Sbjct: 76 IRAYLNSQNPQESMSLFFQMRHQ---------------------------------ECIP 102
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
+D ++++ + C +L + G G++LH ++K + F ++LI+MY+K E A +
Sbjct: 103 IDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNI 162
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD--- 239
+ +L+ N ++A R GE+ +A F R PE D VSWNT+I G+ GD
Sbjct: 163 LDEMAHP-DLVPYNVLLAEYVRVGEINLAHDLFDRMPE-RDLVSWNTMIHGHASLGDVGT 220
Query: 240 ----------------------------AEEGLKLFVRMGENGVRWNEHTFASALSACCG 271
+ E L+LF M V ++ T S LSAC
Sbjct: 221 AKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGD 280
Query: 272 LRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGV--RNSFSIS 329
+ + K IH + +N + + + + +VD+Y KC +++ S+ + G+ R+ F+ S
Sbjct: 281 VGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDID--NSLRVFNGMNNRDVFAWS 338
Query: 330 SMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFD 377
+MI+G + G E A HF + +++ F G + A + L D
Sbjct: 339 AMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVD 386
>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
Length = 708
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 184/641 (28%), Positives = 303/641 (47%), Gaps = 103/641 (16%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
+ L L H IK+GL N L+ +Y K
Sbjct: 130 KVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLG---------------------- 167
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
D + R +FD KD++++ SM+ GY+ G ++L+LF +M + +
Sbjct: 168 --------TDFPETRKVFDGLFVKDVISWTSMISGYVRV-GKPMNSLELFWKMLAYG--V 216
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+ FT+++ + C +L ++ GR H ++ D++ S+LIDM+ + ++A +
Sbjct: 217 EPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQ 276
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F+ E DA+ W ++IS +N +
Sbjct: 277 LFDELLEP---------------------------------DAICWTSIISALTRNDFFD 303
Query: 242 EGLKLFVRMG-ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
E L+ F M ++G+ + TF + L+AC L +K KE+H+ V+ G N V S +
Sbjct: 304 EALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSL 363
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
VD+Y KC G++ E++R FD + KN V W+
Sbjct: 364 VDMYGKC-------------------------------GSVGESQRIFDRMPIKNSVSWS 392
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
AL GY + + +++ + F E V D +L CA AA+ GKE+H +R
Sbjct: 393 ALLGGYCQNGDFKSVIQI---FRKMEKV--DLYCFGTILRTCAGLAAVRQGKEVHCQYIR 447
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
G D + S LVD+Y+KCG + YA+ IF R+L+ +N MI +A +G E+A+ +
Sbjct: 448 KGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRI 507
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
F +M+++GIKPD ++F+ IL A H G V+ G +YF SMT DY I +HY+CM+DL G
Sbjct: 508 FNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLG 567
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQ 600
RA LE+A +++ +D+ + + L C N E+A ++++ LE + YV
Sbjct: 568 RAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVMELEPDYHLSYVL 627
Query: 601 LANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEI 641
LANVY A G W + RIR+ M+ N+ G SW+ ++ +
Sbjct: 628 LANVYKAVGRWNDALRIRRLMKDRGVNKMPGKSWIETKNNL 668
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/398 (20%), Positives = 166/398 (41%), Gaps = 42/398 (10%)
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNT----LISGY 234
CRV+ ++ ++ CR +E+ + + +S NT I
Sbjct: 34 TCRVWSTRKQKQTMVMVVRSSDGVCRNSTLELLVGRWPLTLLTPLNLSDNTNPFSKILQL 93
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
++G+ L+L + + +AS L C + +IH+ V+K+GL +
Sbjct: 94 CKSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDR 153
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
FV + ++ +Y + L + E R+ FD L K
Sbjct: 154 FVGNSLLTLY------------------------------FKLGTDFPETRKVFDGLFVK 183
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
+V+ WT++ SGYV+ +L + + GV +A L ++ AC+ L G+
Sbjct: 184 DVISWTSMISGYVRVGKPMNSLELFWKMLAY-GVEPNAFTLSAVIKACSELGDLKLGRIF 242
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
H +L G + + S L+DM+ + + A +F +E D + + +I+ +
Sbjct: 243 HGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFF 302
Query: 475 EKAILLFEEM-LEKGIKPDAVTFVAILSAFRHCGSVEMG-EKYFNSMTADYKISPETDHY 532
++A+ F M + G+ PD TF +L+A + G ++ G E + +T + + +
Sbjct: 303 DEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVE-- 360
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEED---AVILGSF 567
+ ++D+YG+ + ++ +P + + +LG +
Sbjct: 361 SSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGY 398
>gi|296082968|emb|CBI22269.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 170/541 (31%), Positives = 262/541 (48%), Gaps = 76/541 (14%)
Query: 130 STLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEE 189
S L+ C L V +Q+HA ++K + F LI +S CR
Sbjct: 22 SDLHRCSSLNQV---KQIHAQVLKANLHRESFVGQKLIAAFSLCR--------------- 63
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
+M +A+ F Q + D + +NTLI +V+N + +F
Sbjct: 64 -----------------QMTLAVNVF-NQIQDPDVLLYNTLIRAHVRNSEPLLAFSVFFE 105
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
M ++GV + T+ L AC G V+ + IH+ V K G + FV + ++D Y K
Sbjct: 106 MQDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQVEKMGFCLDIFVPNSLIDSYFKL-- 163
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
G + EARR FD + E++ V W + GYVKA
Sbjct: 164 -----------------------------GELGEARRLFDEMPERDTVSWNTILDGYVKA 194
Query: 370 QNCEALFDLLSEFVTKE---------GVVTDALILVILLGACALQAALHPGKEIHAYILR 420
A F+L + + G+ D ++ +L ACA+ L GK +HA I R
Sbjct: 195 GEMNAAFELFEKMPARNVVSWSTMEAGLKFDDGTVISILSACAVSGLLGLGKRVHASIER 254
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
+ + + L+DMY+KCG++ A IF + +D+V +N +I A HGH EKA+ L
Sbjct: 255 TRFKCSTPVSNALIDMYAKCGSLENALSIFHGMVRKDVVSWNAIIQGLAMHGHGEKALQL 314
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
F M +G PD VTFV +L A H G V+ G YF++M DY + PE +HY CM+DL G
Sbjct: 315 FSRMKGEGFVPDKVTFVGVLCACTHAGFVDEGLHYFHAMERDYGVPPEVEHYGCMVDLLG 374
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQ 600
R +L++A + S+P E +A+I G+ L CR++ LA E ++L++ E ++
Sbjct: 375 RGGRLKEAFRLVHSMPLEPNAIIWGTLLGACRMHSATGLAEEVFDRLVKSELSDSGNLSM 434
Query: 601 LANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSV 660
L+N+YAA G+W IR +M+ + +G S + V+ E+H FTV D SHPK++ IY
Sbjct: 435 LSNIYAAAGDWDNFANIRLRMKSTSIQKPSGGSSIEVDDEVHEFTVFDRSHPKSDRIYKT 494
Query: 661 L 661
+
Sbjct: 495 I 495
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 119/243 (48%), Gaps = 28/243 (11%)
Query: 11 ICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSH 70
+ H Q K G L N LI Y K L E+R+LFDEMPER+ SWNTI+ +K+
Sbjct: 136 MIHAQVEKMGFCLDIFVPNSLIDSYFKLGELGEARRLFDEMPERDTVSWNTILDGYVKAG 195
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
++ A LF+ P +++V++++M G ++ D+ TV S
Sbjct: 196 EMNAAFELFEKMPARNVVSWSTMEAG------------------------LKFDDGTVIS 231
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L+ C +G G+++HA + +T S ++LIDMY+KC E A +F G +
Sbjct: 232 ILSACAVSGLLGLGKRVHASIERTRFKCSTPVSNALIDMYAKCGSLENALSIFHGMVRK- 290
Query: 191 NLISKNAMVAACCREGEMEMALKTFWR---QPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
+++S NA++ G E AL+ F R + + D V++ ++ G +EGL F
Sbjct: 291 DVVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGFVDEGLHYF 350
Query: 248 VRM 250
M
Sbjct: 351 HAM 353
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 114/494 (23%), Positives = 196/494 (39%), Gaps = 97/494 (19%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R +L + H Q +KA L + +LI +S + + +F+++ + +V +NT
Sbjct: 26 RCSSLNQVKQIHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQDPDVLLYNT 85
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I A ++ +S P +L A +F EMQ D +
Sbjct: 86 LIRAHVR-----------NSEP---------LL------------AFSVFFEMQ--DSGV 111
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
D FT L C + V +HA + K F +SLID Y K EA R
Sbjct: 112 CADNFTYPFLLKACSGKVWVRVVEMIHAQVEKMGFCLDIFVPNSLIDSYFKLGELGEARR 171
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F+ E + +S N ++ + GEM A + F + P N VSW+T+
Sbjct: 172 LFDEMPER-DTVSWNTILDGYVKAGEMNAAFELFEKMPARN-VVSWSTM----------- 218
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E G+++++ T S LSAC + K +H+ + + + VS+ ++
Sbjct: 219 ----------EAGLKFDDGTVISILSACAVSGLLGLGKRVHASIERTRFKCSTPVSNALI 268
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D+Y KC G++E A F + K+VV W A
Sbjct: 269 DMYAKC-------------------------------GSLENALSIFHGMVRKDVVSWNA 297
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE-IHAYILR 420
+ G + E L S + EG V D + V +L AC + G HA
Sbjct: 298 IIQGLAMHGHGEKALQLFSR-MKGEGFVPDKVTFVGVLCACTHAGFVDEGLHYFHAMERD 356
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMI-ACYAHHGHEEKAI 478
GV + + +VD+ + G + A ++ +E + +++ ++ AC H A
Sbjct: 357 YGVPPEVEHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLLGACRMH-----SAT 411
Query: 479 LLFEEMLEKGIKPD 492
L EE+ ++ +K +
Sbjct: 412 GLAEEVFDRLVKSE 425
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 169/550 (30%), Positives = 273/550 (49%), Gaps = 45/550 (8%)
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
I D S L + + LHA +++ + ++L++MYSK +
Sbjct: 72 ISPDRHLFPSLLRASTLFKHFNLAQSLHAAVIRLGFHFDLYTANALMNMYSKFHPHLSPL 131
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
F N +K ++ +++ K F R P + D VSWNT+I+G QNG
Sbjct: 132 HEFPQARHNHN--NKYSV--------KIDSVRKLFDRMP-VRDVVSWNTVIAGNAQNGMY 180
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
EE L + MG+ +R + T +S L NV KEIH + +++G + F+ S +
Sbjct: 181 EEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSL 240
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
+D+Y KC + + L R++ S +S+I G G ++ F + ++ V
Sbjct: 241 IDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQ 300
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
FS ++ ACA AL+ GK++HAYI+R
Sbjct: 301 VSFSS--------------------------------VIPACAHLTALNLGKQLHAYIIR 328
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF--IERDLVLYNVMIACYAHHGHEEKAI 478
+G +K + S+L+DMY+KCGN+ A IF +RD+V + +I A HGH A+
Sbjct: 329 LGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAV 388
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
LFEEML G+KP V F+A+L+A H G V+ G KYFNSM D+ ++P +HYA + DL
Sbjct: 389 SLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADL 448
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARY 598
GRA +LE+A +F+ ++ E + + L CR ++N ELA + K+L ++ N +
Sbjct: 449 LGRAGRLEEAYDFISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKILLVDPGNMGAH 508
Query: 599 VQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
V ++N+Y+A W + ++R +MR + CSW+ V +++H F GD SHP + I
Sbjct: 509 VIMSNIYSAAQRWRDAAKLRVRMRKTGLKKTPACSWIEVGNKVHTFLAGDKSHPYYDKIN 568
Query: 659 SVLAIFTGEL 668
L I ++
Sbjct: 569 EALNILLEQM 578
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 123/491 (25%), Positives = 211/491 (42%), Gaps = 89/491 (18%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
+ NL ++L H I+ G T N L+++YSK E P+ + N
Sbjct: 90 KHFNLAQSL--HAAVIRLGFHFDLYTANALMNMYSK---FHPHLSPLHEFPQAR-HNHNN 143
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
S I S R LFD P +D+V++N+++ G YE +AL + EM E++
Sbjct: 144 KYSVKIDS-----VRKLFDRMPVRDVVSWNTVIAGNAQNGMYE-EALNMVKEM--GKENL 195
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
R D FT++S L + + NV G+++H + ++ D F SSLIDMY+KC E +
Sbjct: 196 RPDSFTLSSILPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVC 255
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
F + + IS N+++A C VQNG +
Sbjct: 256 AFHLLSNR-DAISWNSIIAGC--------------------------------VQNGRFD 282
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
+GL F RM + V+ + +F+S + AC L + K++H+++++ G N F++S ++
Sbjct: 283 QGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLL 342
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS--LTEKNVVVW 359
D+Y KC GN++ AR F+ + ++++V W
Sbjct: 343 DMYAKC-------------------------------GNIKMARYIFNKIEMCDRDMVSW 371
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG-KEIHAYI 418
TA+ G + L E + +GV + + +L AC+ + G K ++
Sbjct: 372 TAIIMGCAMHGHALDAVSLFEEMLV-DGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQ 430
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDL--VLYNVMIACYAHHGHEEK 476
GV + + + D+ + G + A N E V ++ AC AH K
Sbjct: 431 RDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNMGEEPTGSVWSTLLAACRAH-----K 485
Query: 477 AILLFEEMLEK 487
I L E+++ K
Sbjct: 486 NIELAEKVVNK 496
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 153/323 (47%), Gaps = 13/323 (4%)
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
L + N +V C + +KT P +++W +I Y +G L F +
Sbjct: 12 LRNPNTVVPTCHVKQLHAQIVKTTKATPH---SLAWICIIKCYASHGLLRHSLASFNLLR 68
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
G+ + H F S L A ++ A+ +H+ V++ G + + ++ ++++Y K
Sbjct: 69 SFGISPDRHLFPSLLRASTLFKHFNLAQSLHAAVIRLGFHFDLYTANALMNMYSKFH--P 126
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
+ + R++ + YS++ ++ R+ FD + ++VV W + +G +
Sbjct: 127 HLSPLHEFPQARHNHNNK-----YSVK--IDSVRKLFDRMPVRDVVSWNTVIAGNAQNGM 179
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
E +++ E + KE + D+ L +L A + GKEIH Y +R G D + S
Sbjct: 180 YEEALNMVKE-MGKENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGS 238
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
+L+DMY+KC + + F RD + +N +IA +G ++ + F ML++ +KP
Sbjct: 239 SLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKP 298
Query: 492 DAVTFVAILSAFRHCGSVEMGEK 514
V+F +++ A H ++ +G++
Sbjct: 299 MQVSFSSVIPACAHLTALNLGKQ 321
>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
Length = 569
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 162/499 (32%), Positives = 259/499 (51%), Gaps = 50/499 (10%)
Query: 164 SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELND 223
S L M K +EA +F E + +S N M++ R ME A + F+ + D
Sbjct: 11 SVLAGMSKKRGKLKEAQELFVKIPEP-DAVSYNTMLSCYVRNSNMERA-QAFFEDMPIKD 68
Query: 224 AVSWNTLISGYVQNGDAEEGLKLFVRMG-ENGVRWNEHTFASALSACCGLRNVKCAKEIH 282
SWNT+I+G+ QN ++ LF+ M +N V WN
Sbjct: 69 TPSWNTMITGFAQNQQMDKARDLFLIMPTKNVVTWN------------------------ 104
Query: 283 SWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNME 342
++ Y +C +++ A + ++ + ++MI GY G +
Sbjct: 105 ----------------AMISGYVECGDLDSALKLFEKAPFKSVVAWTAMITGYMKLGRIG 148
Query: 343 EARRHFDSLTEKNVVVWTALFSGYV---KAQNCEALFDLLSEFVTKEGVVTDALILVILL 399
A R F+ + EKN+V W A+ +GY+ +A++ LF + F G+ ++ L L
Sbjct: 149 LAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGF----GIQPNSSTLSSAL 204
Query: 400 GACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLV 459
C+ +AL G+++H + + + D ++L+ MY KCG + +F RD+V
Sbjct: 205 LGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPRRDVV 264
Query: 460 LYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSM 519
+N MI+ YA HG +KA+ LF+EM+EKG+KPD +TFVA+L A H G ++G KYF+SM
Sbjct: 265 TWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAGFTDLGVKYFHSM 324
Query: 520 TADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAEL 579
DY + + DHY CM+DL GRA +L +A++ ++ +P + A + G+ L CR+++N E+
Sbjct: 325 AKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKMPFKPHAAVFGTLLGACRIHKNTEM 384
Query: 580 AGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEH 639
A A +KLL L+ + YVQLANVYAA W + R+RK M+ K + G SW+ V+
Sbjct: 385 AEFASQKLLNLDPASATGYVQLANVYAATKRWDHVARVRKSMKSCKVVKTPGYSWIEVKS 444
Query: 640 EIHIFTVGDVSHPKTNAIY 658
H F GD HP+ +I+
Sbjct: 445 MAHQFRSGDKFHPELASIH 463
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 110/455 (24%), Positives = 204/455 (44%), Gaps = 80/455 (17%)
Query: 24 TTITTNQLIHIYSK-HNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSS 82
TT+T N ++ SK L+E+++LF ++PE + S+NT++S +++ ++++A++ F+
Sbjct: 5 TTVTWNSVLAGMSKKRGKLKEAQELFVKIPEPDAVSYNTMLSCYVRNSNMERAQAFFEDM 64
Query: 83 PHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVG 142
P KD ++N+M+ G+ A+ + D + D F + T N
Sbjct: 65 PIKDTPSWNTMITGF--AQNQQMDKAR--------------DLFLIMPTKN--------- 99
Query: 143 FGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAAC 202
V T N ++I Y +C + A ++FE + ++++ AM+
Sbjct: 100 ---------VVTWN--------AMISGYVECGDLDSALKLFEKAPFK-SVVAWTAMITGY 141
Query: 203 CREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTF 262
+ G + +A + F + PE N V+WN +I+GY++N AE+G+KLF M G++ N T
Sbjct: 142 MKLGRIGLAERLFEKMPEKN-LVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQPNSSTL 200
Query: 263 ASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGV 322
+SAL C L ++ +++H V K+ L + + ++ +YCKC
Sbjct: 201 SSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKC--------------- 245
Query: 323 RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF 382
G +E+ + F + ++VV W A+ SGY + + L E
Sbjct: 246 ----------------GVLEDGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEM 289
Query: 383 VTKEGVVTDALILVILLGACALQAALHPG-KEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
+ K G+ D + V +L AC G K H+ G+ + +VD+ + G
Sbjct: 290 IEK-GMKPDWITFVAVLMACNHAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAG 348
Query: 442 NMTYAEIIFQN--FIERDLVLYNVMIACYAHHGHE 474
+ A + + F V ++ AC H E
Sbjct: 349 KLVEAVDLIEKMPFKPHAAVFGTLLGACRIHKNTE 383
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 134/284 (47%), Gaps = 39/284 (13%)
Query: 22 TLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDS 81
T +T N +I Y + L + KLF++ P ++V +W +I+ +K + A LF+
Sbjct: 97 TKNVVTWNAMISGYVECGDLDSALKLFEKAPFKSVVAWTAMITGYMKLGRIGLAERLFEK 156
Query: 82 SPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNV 141
P K+LVT+N+M+ GYI E D +KLF M I+ + T++S L C +L +
Sbjct: 157 MPEKNLVTWNAMIAGYIENHRAE-DGVKLFRTMVGFG--IQPNSSTLSSALLGCSELSAL 213
Query: 142 GFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAA 201
GRQ+H + K+ A +SLI MY KC E+ ++F ++++ NAM
Sbjct: 214 QLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPRR-DVVTWNAM--- 269
Query: 202 CCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHT 261
ISGY Q+G+ ++ L LF M E G++ + T
Sbjct: 270 -----------------------------ISGYAQHGEGKKALGLFDEMIEKGMKPDWIT 300
Query: 262 FASALSAC--CGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
F + L AC G ++ K HS GL++ P + +VD+
Sbjct: 301 FVAVLMACNHAGFTDLG-VKYFHSMAKDYGLVAKPDHYTCMVDL 343
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H K+ L T LI +Y K +L + KLF ++P R+V +WN +IS + +
Sbjct: 220 HQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPRRDVVTWNAMISGYAQHGEG 279
Query: 73 KQARSLFDSSPHK----DLVTYNSMLCGYINAEGYEADALKLFIEM 114
K+A LFD K D +T+ ++L N G+ +K F M
Sbjct: 280 KKALGLFDEMIEKGMKPDWITFVAVLMA-CNHAGFTDLGVKYFHSM 324
>gi|297740913|emb|CBI31095.3| unnamed protein product [Vitis vinifera]
Length = 768
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 203/761 (26%), Positives = 342/761 (44%), Gaps = 162/761 (21%)
Query: 11 ICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFD--------------------- 49
+ H +++ L+ T +N+LI Y+K N + SR+LFD
Sbjct: 26 LIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKRDIYTWNAILGAYCKAS 85
Query: 50 ----------EMPERNVFSWNTIISACIKSH------DLKQAR----------------- 76
EMPERN+ SWNT+ISA ++ D++ R
Sbjct: 86 ELEDAHVLFAEMPERNIVSWNTLISALTRNGACGALVDVECGRRCHGISIKIGLDNNIYV 145
Query: 77 ------------------SLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSAD 118
F P + V++ +M+ G +++ +A +LF M
Sbjct: 146 GNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVN-EAFRLFRLMLR-- 202
Query: 119 EHIRMDEFTVTSTLNLCVK--------------LLNVGFGRQLHAFMVKTSNDASGFAVS 164
I +D +++S L +C + L + G+Q+H +K ++ +
Sbjct: 203 NRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNN 262
Query: 165 SLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVA------------------------ 200
SL+DMY+K + A +F EV+++S N M+A
Sbjct: 263 SLLDMYAKNGNMDSAEMIFVN-MPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFE 321
Query: 201 -----------ACCREGEMEMALKTF--WRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
AC + G++E + F P L+ SWNT++SGY QN + +E +KLF
Sbjct: 322 PDEITYVNMLVACIKSGDIEAGRQMFDGMSSPSLS---SWNTILSGYSQNENHKEAVKLF 378
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
M V + T A LS+ G+ ++ +++H+ K ++ +++SG++ +Y KC
Sbjct: 379 REMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKC 438
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
G +E A+R FD + E ++V W ++ +G
Sbjct: 439 -------------------------------GKVEMAKRIFDRIAELDIVCWNSMMAGLS 467
Query: 368 KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDK 427
+ F + K G+ +L CA ++L G+++H+ I R G D
Sbjct: 468 LNSLDKEAFTFFKKMREK-GMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDA 526
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
+ S L+DMYSKCG++ A +F + ++ V +N MI YA +G ++A+LL+E+M+
Sbjct: 527 FVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGS 586
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEK 547
G KPD +TFVA+L+A H G V+ G K FNSM ++ + P DHY C+ID GRA +L +
Sbjct: 587 GEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHE 646
Query: 548 AIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAA 607
A + +P + D +I L+ CR+ + LA A E+L L+ N A YV LAN+Y++
Sbjct: 647 AEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEELFHLDPQNSAPYVLLANIYSS 706
Query: 608 EGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGD 648
G W + +R+ M + + G SW+ ++ + F V D
Sbjct: 707 LGRWDDAKAVRELMSYNQVVKDPGYSWIEHKNGMQAFMVDD 747
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 121/486 (24%), Positives = 211/486 (43%), Gaps = 91/486 (18%)
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
+ S L C+ G+ +HA M+++ F + LI+ Y+KC + + R+F+
Sbjct: 8 LASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMP 67
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
+ ++ + NA++ A C+ E+E A F PE N VSWNTLIS +NG
Sbjct: 68 KR-DIYTWNAILGAYCKASELEDAHVLFAEMPERN-IVSWNTLISALTRNG--------- 116
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
AC L +V+C + H +K GL +N +V + ++ +Y KC
Sbjct: 117 --------------------ACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKC 156
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
+G ++Q F + E N V +TA+ G
Sbjct: 157 R-----------------------CIGDAIQA--------FGDVPEPNEVSFTAMMGGLA 185
Query: 368 KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACA---------------LQAALHPGK 412
+ F L + + + D++ L +LG C+ L + +H G+
Sbjct: 186 DSDQVNEAFRLF-RLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVH-GQ 243
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
++H ++ G + D L ++L+DMY+K GNM AE+IF N E +V +NVMIA Y
Sbjct: 244 QVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKS 303
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
KAI + M G +PD +T+V +L A G +E G + F+ M+ SP +
Sbjct: 304 QSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMS-----SPSLSSW 358
Query: 533 ACMIDLYGRANQLEKAIEFMKSI------PTEED-AVILGSFLNVCRLNRNAELAGEAEE 585
++ Y + ++A++ + + P A+IL S + L ++ +++
Sbjct: 359 NTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQK 418
Query: 586 KLLRLE 591
+ R +
Sbjct: 419 AVFRTD 424
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 80/175 (45%), Gaps = 15/175 (8%)
Query: 390 TDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEII 449
T L LL C + A GK IHA++LR + D L + L++ Y+KC + + +
Sbjct: 3 TKTTYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRL 62
Query: 450 FQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRH---C 506
F +RD+ +N ++ Y E A +LF EM E+ I V++ ++SA C
Sbjct: 63 FDQMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNI----VSWNTLISALTRNGAC 118
Query: 507 GS---VEMGEKYFNSMTADYKISPETDHYA--CMIDLYGRANQLEKAIEFMKSIP 556
G+ VE G + KI + + Y ++ +Y + + AI+ +P
Sbjct: 119 GALVDVECGRRCHG---ISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVP 170
>gi|357495605|ref|XP_003618091.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519426|gb|AET01050.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 174/597 (29%), Positives = 306/597 (51%), Gaps = 69/597 (11%)
Query: 75 ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNL 134
AR +FD +K+ +N+M+ Y+ +A+ +FI+ ++E + D+ T+ S L
Sbjct: 277 ARMVFDRCLNKNTEIWNTMIVAYVQ-NNCPVEAIDVFIQALESEEGV-CDDVTLLSVLTA 334
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
+L + Q HAF++K+ + +++++ MYS+C + + +VF+ E
Sbjct: 335 VSQLQQIKLAEQFHAFVIKSLPGSLIIILNAVMVMYSRCNHVDTSLKVFDKMLER----- 389
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
DAVSWNT+IS +VQNG EE L L M +
Sbjct: 390 ----------------------------DAVSWNTIISAFVQNGFDEEALMLVCEMQKQK 421
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
+ T + LSA LRN+ K+ H+++++ G I + S ++D+Y K ++ AE
Sbjct: 422 FLIDSVTATALLSAASNLRNLYVGKQTHAYLIRRG-IQFEGMESYLIDMYAKSGSIRTAE 480
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEA 374
LL + + ++++ W A+ +GY + E
Sbjct: 481 --LLFEQ---------------------------NCSSDRDQATWNAIIAGYTQNGLNEK 511
Query: 375 LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLV 434
LL + + + V+ +A+ L +L AC+ ++ +++H + +R ++ + + ++L
Sbjct: 512 AILLLKQMLV-QNVIPNAVTLASILPACSSMGSMGLARQLHGFSIRRFLEKNVYVGTSLT 570
Query: 435 DMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAV 494
D YSKCG ++YAE +F E++ V Y M+ CY HG ++A+ L++ ML GI+PDAV
Sbjct: 571 DTYSKCGAISYAENVFLRTPEKNSVTYTTMMMCYGQHGMGKRALTLYDSMLRSGIRPDAV 630
Query: 495 TFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKS 554
TFVAILSA + G V+ G + F SM +KI P +HY C+ D+ GR ++ +A EF+K
Sbjct: 631 TFVAILSACNYSGLVDEGLQIFESMEKVHKIKPSIEHYCCVADMLGRVGRVVEAYEFVKG 690
Query: 555 IPTEEDAV-ILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNK--ARYVQLANVYAAEGNW 611
+ + + + I GS L CR + + EL +KLL + + + +V L+N+YA EG W
Sbjct: 691 LGEDANTMEIWGSLLGSCRNHGHFELGKAVAKKLLNMGMDKRMAGYHVLLSNIYAEEGEW 750
Query: 612 AEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
++ R+RKQM+ ++ GCSWV + ++ F D HP+++ IY +L + T ++
Sbjct: 751 EKVDRVRKQMKEKGLHKETGCSWVEIAGFVNCFVSRDEKHPQSSEIYYMLDMLTLDM 807
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 145/593 (24%), Positives = 255/593 (43%), Gaps = 100/593 (16%)
Query: 59 WNTIISACIKSHDLKQARS--------LFDSSPHKDLVTYNSMLCGYINAEGYEADALKL 110
WN IS I+S K R L DS P V +NS++ G+I AL L
Sbjct: 44 WNKAISTSIRSRLSKLCREGQPHLALHLLDSLPRPSTVVWNSVIIGFI-CNNLPHQALLL 102
Query: 111 FIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVK----TSNDASGFAVSSL 166
+ +M+S D +T +STL C ++ G+ +H+ ++ T+ S +SL
Sbjct: 103 YAKMRSNSSCSTFDPYTFSSTLKACALTKDILTGKAIHSHFLRSHSNTNTGPSRIVYNSL 162
Query: 167 IDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVS 226
++MY+ C+ +E A VF+ + V+
Sbjct: 163 LNMYASCQ-HEYALNVFDVMRRR---------------------------------NVVA 188
Query: 227 WNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVL 286
WNTLI +V+ + ++ F M V + TF + A L + + K + ++
Sbjct: 189 WNTLILSFVKMNRYPQAVEAFANMINQSVMPSPVTFVNLFPALSKLGDSRTVKMFYGFMR 248
Query: 287 KNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARR 346
K G D Y V + F +SS I+ +S G M+ AR
Sbjct: 249 KFG------------DQY-----------------VSDVFVVSSAILMFSDVGCMDYARM 279
Query: 347 HFDSLTEKNVVVWTALFSGYVKAQNC--EALFDLLSEFVTKEGVVTDALILVILLGACAL 404
FD KN +W + YV+ NC EA+ + ++EGV D +L +L L
Sbjct: 280 VFDRCLNKNTEIWNTMIVAYVQ-NNCPVEAIDVFIQALESEEGVCDDVTLLSVLTAVSQL 338
Query: 405 QAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVM 464
Q + ++ HA++++ +++ ++ MYS+C ++ + +F +ERD V +N +
Sbjct: 339 Q-QIKLAEQFHAFVIKSLPGSLIIILNAVMVMYSRCNHVDTSLKVFDKMLERDAVSWNTI 397
Query: 465 IACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYK 524
I+ + +G +E+A++L EM ++ D+VT A+LSA + ++ +G++ +
Sbjct: 398 ISAFVQNGFDEEALMLVCEMQKQKFLIDSVTATALLSAASNLRNLYVGKQTHAYLIRRGI 457
Query: 525 ISPETDHYACMIDLYGRANQLEKA-IEFMKSIPTEED-----AVILGSFLNVCRLNRNAE 578
+ Y +ID+Y ++ + A + F ++ ++ D A+I G N LN A
Sbjct: 458 QFEGMESY--LIDMYAKSGSIRTAELLFEQNCSSDRDQATWNAIIAGYTQN--GLNEKAI 513
Query: 579 LAGEAEEKLLR--LEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRF 629
L LL+ L N V LA++ A + MG + +Q+ G RF
Sbjct: 514 L-------LLKQMLVQNVIPNAVTLASILPACSSMGSMG-LARQLHGFSIRRF 558
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 128/505 (25%), Positives = 216/505 (42%), Gaps = 81/505 (16%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H IK+ I N ++ +YS+ N + S K+FD+M ER+ SWNTIISA +++
Sbjct: 348 HAFVIKSLPGSLIIILNAVMVMYSRCNHVDTSLKVFDKMLERDAVSWNTIISAFVQN--- 404
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
G++ +AL L EMQ + +D T T+ L
Sbjct: 405 -----------------------------GFDEEALMLVCEMQK--QKFLIDSVTATALL 433
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE-GCTEEVN 191
+ L N+ G+Q HA++++ G S LIDMY+K A +FE C+ +
Sbjct: 434 SAASNLRNLYVGKQTHAYLIRRGIQFEGME-SYLIDMYAKSGSIRTAELLFEQNCSSD-- 490
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
D +WN +I+GY QNG E+ + L +M
Sbjct: 491 ------------------------------RDQATWNAIIAGYTQNGLNEKAILLLKQML 520
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
V N T AS L AC + ++ A+++H + ++ L N +V + + D Y KC ++
Sbjct: 521 VQNVIPNAVTLASILPACSSMGSMGLARQLHGFSIRRFLEKNVYVGTSLTDTYSKCGAIS 580
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
YAE++ L +NS + ++M++ Y G + A +DS+ + F + A N
Sbjct: 581 YAENVFLRTPEKNSVTYTTMMMCYGQHGMGKRALTLYDSMLRSGIRPDAVTFVAILSACN 640
Query: 372 CEALFDL-LSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
L D L F + E V + I C G+ + AY G+ D +
Sbjct: 641 YSGLVDEGLQIFESMEKV--HKIKPSIEHYCCVADMLGRVGRVVEAYEFVKGLGEDANTM 698
Query: 431 STLVDMYSKCGNMTYAEI-------IFQNFIERDLVLYNVMIA-CYAHHGHEEKAILLFE 482
+ C N + E+ + +++ + Y+V+++ YA G EK + +
Sbjct: 699 EIWGSLLGSCRNHGHFELGKAVAKKLLNMGMDKRMAGYHVLLSNIYAEEGEWEKVDRVRK 758
Query: 483 EMLEKGI-KPDAVTFVAILSAFRHC 506
+M EKG+ K ++V I + F +C
Sbjct: 759 QMKEKGLHKETGCSWVEI-AGFVNC 782
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 185/605 (30%), Positives = 290/605 (47%), Gaps = 75/605 (12%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYI-NAEGYEADALKLFIEMQSAD 118
N +I K + AR +FD +D++++N+M+ G N G+EA +F++MQ
Sbjct: 462 NALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEA--FTVFLQMQQ-- 517
Query: 119 EHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEE 178
E + D T S LN + + ++H V+T + S+ I MY +C ++
Sbjct: 518 EGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDD 577
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
A +F+ + + +WN +I G Q
Sbjct: 578 ARLLFD---------------------------------KLSVRHVTTWNAMIGGAAQQR 604
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
E L LF++M G + TF + LSA ++ KE+HS GL+ + V +
Sbjct: 605 CGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGLV-DLRVGN 663
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
+V Y KC N+ YA+ + FD + E+NV
Sbjct: 664 ALVHTYSKCGNVKYAKQV-------------------------------FDDMVERNVTT 692
Query: 359 WTALFSGYVKAQNCEALFDLLSEFVT--KEGVVTDALILVILLGACALQAALHPGKEIHA 416
WT + G + C D S F+ +EG+V DA V +L ACA AL KE+H
Sbjct: 693 WTMMIGGLAQ-HGCG--HDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHN 749
Query: 417 YILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
+ + G+ D ++ + LV MY+KCG++ A +F + +ERD+ + VMI A HG +
Sbjct: 750 HAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLE 809
Query: 477 AILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMI 536
A+ F +M +G KP+ ++VA+L+A H G V+ G + F SMT DY I P +HY CM+
Sbjct: 810 ALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMV 869
Query: 537 DLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKA 596
DL GRA LE+A F+ ++P E D G+ L C N E+A A ++ L+L+ + +
Sbjct: 870 DLLGRAGLLEEAELFILNMPIEPDDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSAS 929
Query: 597 RYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNA 656
YV L+N+YAA G W + +R M+ + G SW+ V++ IH F VGD SHP++
Sbjct: 930 TYVLLSNIYAATGKWEQKLLVRSMMQRKGIRKEPGRSWIEVDNRIHSFVVGDTSHPESKE 989
Query: 657 IYSVL 661
IY+ L
Sbjct: 990 IYAQL 994
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 186/382 (48%), Gaps = 65/382 (17%)
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
I +D F+ + L C+K ++ +Q+H ++K+ + + + + L+ +Y +C + A
Sbjct: 114 IAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCAR 173
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+VF+ L+ KN + W T+I GY + G A
Sbjct: 174 QVFD------KLLKKNIYI---------------------------WTTMIGGYAEYGHA 200
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
E+ ++++ +M + + NE T+ S L ACC N+K K+IH+ ++++G S+ V + +
Sbjct: 201 EDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETAL 260
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
V++Y KC G++E+A+ FD + E+NV+ WT
Sbjct: 261 VNMYVKC-------------------------------GSIEDAQLIFDKMVERNVISWT 289
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
+ G + F L + + +EG + ++ V +L A A AL KE+H++ +
Sbjct: 290 VMIGGLAHYGRGQEAFHLFLQ-MQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVN 348
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
G+ +D ++ + LV MY+K G++ A ++F ERD+ + VMI A HG ++A L
Sbjct: 349 AGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSL 408
Query: 481 FEEMLEKGIKPDAVTFVAILSA 502
F +M G P+ T+++IL+A
Sbjct: 409 FLQMQRNGCLPNLTTYLSILNA 430
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 134/516 (25%), Positives = 220/516 (42%), Gaps = 120/516 (23%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A+ AGL L N L+H+Y+K S +
Sbjct: 343 HSHAVNAGLALDLRVGNALVHMYAK-------------------------------SGSI 371
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
AR +FD +D+ ++ M+ G + G +A LF++MQ L
Sbjct: 372 DDARVVFDGMTERDIFSWTVMIGG-LAQHGRGQEAFSLFLQMQRNG---------CLPNL 421
Query: 133 NLCVKLLNVGFGRQLHAF----MVKTSNDASGFAV-----SSLIDMYSKCRCYEEACRVF 183
+ +LN A +V + +GF ++LI MY+KC ++A VF
Sbjct: 422 TTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVF 481
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
+G C R D +SWN ++ G QNG E
Sbjct: 482 DG---------------MCDR------------------DVISWNAMMGGLAQNGCGHEA 508
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
+F++M + G+ + T+ S L+ ++ E+H ++ GLIS+ V S + +
Sbjct: 509 FTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHM 568
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y +C G++++AR FD L+ ++V W A+
Sbjct: 569 YIRC-------------------------------GSIDDARLLFDKLSVRHVTTWNAMI 597
Query: 364 SGYVKAQNC--EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
G + Q C EAL L + +EG + DA + +L A + AL KE+H++
Sbjct: 598 GGAAQ-QRCGREALSLFLQ--MQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDA 654
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
G+ +D ++ + LV YSKCGN+ YA+ +F + +ER++ + +MI A HG A F
Sbjct: 655 GL-VDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHF 713
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFN 517
+ML +GI PDA T+V+ILSA G++E ++ N
Sbjct: 714 LQMLREGIVPDATTYVSILSACASTGALEWVKEVHN 749
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/501 (22%), Positives = 225/501 (44%), Gaps = 103/501 (20%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
HV IK+G+ N+L+ +Y + L+ +R++FD++ ++N++ W T+I
Sbjct: 141 HVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIG-------- 192
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAE-GYEADALKLFIEMQSADEHIRMDEFTVTST 131
GY AE G+ DA++++ +M+ E + +E T S
Sbjct: 193 -----------------------GY--AEYGHAEDAMRVYDKMRQ--ECGQPNEITYLSI 225
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L C +N+ +G+++HA ++++ + ++L++MY KC E+A +F+ E
Sbjct: 226 LKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVER-- 283
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
+ +SW +I G G +E LF++M
Sbjct: 284 -------------------------------NVISWTVMIGGLAHYGRGQEAFHLFLQMQ 312
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
G N +T+ S L+A ++ KE+HS + GL + V + +V +Y K
Sbjct: 313 REGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAK----- 367
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
G++++AR FD +TE+++ WT + G +
Sbjct: 368 --------------------------SGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGR 401
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACAL--QAALHPGKEIHAYILRMGVQMDKKL 429
+ F L + + + G + + + +L A A+ +AL K +H + G D ++
Sbjct: 402 GQEAFSLFLQ-MQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRI 460
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+ L+ MY+KCG++ A ++F +RD++ +N M+ A +G +A +F +M ++G+
Sbjct: 461 GNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGL 520
Query: 490 KPDAVTFVAILSAFRHCGSVE 510
PD+ T++++L+ ++E
Sbjct: 521 VPDSTTYLSLLNTHGSTDALE 541
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 141/272 (51%), Gaps = 35/272 (12%)
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
DA LK+ V + G+ + ++ + L C ++ AK++H ++K+G+ N +V++
Sbjct: 101 DAVAMLKIRV---QQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVAN 157
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
++ VY +C G ++ AR+ FD L +KN+ +
Sbjct: 158 KLLRVYIRC-------------------------------GRLQCARQVFDKLLKKNIYI 186
Query: 359 WTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
WT + GY + + E + + + G + L IL AC L GK+IHA+I
Sbjct: 187 WTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSIL-KACCCPVNLKWGKKIHAHI 245
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
++ G Q D ++ + LV+MY KCG++ A++IF +ER+++ + VMI AH+G ++A
Sbjct: 246 IQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAF 305
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVE 510
LF +M +G P++ T+V+IL+A G++E
Sbjct: 306 HLFLQMQREGFIPNSYTYVSILNANASAGALE 337
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 124/540 (22%), Positives = 228/540 (42%), Gaps = 97/540 (17%)
Query: 11 ICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSH 70
+ H A +AG N LIH+Y+K + ++R +FD M +R+V SWN ++ ++
Sbjct: 444 VVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNG 503
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM-QSADEHIRMDEFTVT 129
+A ++F + LV ++ +N G DAL+ E+ + A E + +F V
Sbjct: 504 CGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHG-STDALEWVNEVHKHAVETGLISDFRVG 562
Query: 130 ST-LNLCVKLLNVGFGR----QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF- 183
S +++ ++ ++ R +L V T N ++I ++ RC EA +F
Sbjct: 563 SAFIHMYIRCGSIDDARLLFDKLSVRHVTTWN--------AMIGGAAQQRCGREALSLFL 614
Query: 184 ----EG----CTEEVNLISK----------------------------NAMVAACCREGE 207
EG T +N++S NA+V + G
Sbjct: 615 QMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGLVDLRVGNALVHTYSKCGN 674
Query: 208 MEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALS 267
++ A + F E N +W +I G Q+G + F++M G+ + T+ S LS
Sbjct: 675 VKYAKQVFDDMVERN-VTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILS 733
Query: 268 ACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFS 327
AC ++ KE+H+ + GL+S+ V + +V +Y KC
Sbjct: 734 ACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKC-------------------- 773
Query: 328 ISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK-AQNCEALFDLLSEFVTK- 385
G++++AR FD + E++V WT + G + + EAL +F K
Sbjct: 774 -----------GSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEAL-----DFFVKM 817
Query: 386 --EGVVTDALILVILLGACALQAALHPG-KEIHAYILRMGVQMDKKLISTLVDMYSKCGN 442
EG + V +L AC+ + G ++ + G++ + + +VD+ + G
Sbjct: 818 KSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGL 877
Query: 443 MTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
+ AE+ N IE D + ++ +G+ E A +E L+ +KP + + +LS
Sbjct: 878 LEEAELFILNMPIEPDDAPWGALLGACVTYGNLEMAEFAAKERLK--LKPKSASTYVLLS 935
>gi|115476932|ref|NP_001062062.1| Os08g0481000 [Oryza sativa Japonica Group]
gi|42409025|dbj|BAD10278.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113624031|dbj|BAF23976.1| Os08g0481000 [Oryza sativa Japonica Group]
gi|215715342|dbj|BAG95093.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640747|gb|EEE68879.1| hypothetical protein OsJ_27695 [Oryza sativa Japonica Group]
Length = 563
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 164/471 (34%), Positives = 259/471 (54%), Gaps = 10/471 (2%)
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
N+IS N+++A C G++ A F R P N A SWN +++G V+ G E+ LF +M
Sbjct: 78 NVISWNSIIAGCLAHGDLAAASAYFARAPRRNVA-SWNAMLAGLVRLGSMEDARSLFDQM 136
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
E V + T L+ C V A+E+ + L+S + SG VD E
Sbjct: 137 PERNVV-SYTTMVDGLARCG---EVASARELFDAMPTRNLVSWAAMISGYVDNNMLEEAR 192
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
E+M +N + ++MI GY +G+++ ARR FD + K+V+ W A+ SGYV
Sbjct: 193 KLFEAM----PEKNVVACTAMITGYCKEGDLQNARRLFDGIRAKDVISWNAIISGYVHNG 248
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
E L + +EG+ D L+ LL AC+ A L G+ HA +++ ++ +
Sbjct: 249 LGEEATKLYI-IMLREGIKPDQATLIALLTACSSLALLRQGRSTHAVVIKAMLESSISIC 307
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+ L+ MYSKCGN+ +E++F + +D+V +N +IA YA HG +K I LF EM G+
Sbjct: 308 NALMTMYSKCGNVDESELVFMSLKSQDIVSWNTIIAAYAQHGRYQKVIALFHEMELCGLI 367
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
P+ +TF+++LSA H G V+ K F+ M + Y ISP +HYAC++D+ RA QLEKA
Sbjct: 368 PNDITFLSMLSACGHAGRVDESLKLFDLMFSKYAISPRAEHYACIVDILSRAGQLEKACS 427
Query: 551 FMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGN 610
++K +P+E + + G+ L + + N +L A + L+ + + YV L+N+YAA G
Sbjct: 428 YIKEMPSEAEKNVWGTLLCASQTHGNVQLGELAAKMLVLSDFESSGAYVMLSNIYAAAGM 487
Query: 611 WAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
W E+ R+R QM+ + G SW + ++H+F GD SHP+ + I S L
Sbjct: 488 WGEVNRVRSQMKEKGVKKQPGHSWTEIADKVHMFVGGDASHPEMDMILSEL 538
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 127/461 (27%), Positives = 222/461 (48%), Gaps = 31/461 (6%)
Query: 41 LRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINA 100
L +R LFD+MP RNV SWN+II+ C+ DL A + F +P +++ ++N+ML G +
Sbjct: 64 LPAARSLFDDMPSRNVISWNSIIAGCLAHGDLAAASAYFARAPRRNVASWNAMLAGLVRL 123
Query: 101 EGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASG 160
E DA LF D+ + + T+ ++ + V R+L M T N S
Sbjct: 124 GSME-DARSLF------DQMPERNVVSYTTMVDGLARCGEVASARELFDAM-PTRNLVSW 175
Query: 161 FAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPE 220
A +I Y EEA ++FE E+ N+++ AM+ C+EG+++ A + F
Sbjct: 176 AA---MISGYVDNNMLEEARKLFEAMPEK-NVVACTAMITGYCKEGDLQNARRLF-DGIR 230
Query: 221 LNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKE 280
D +SWN +ISGYV NG EE KL++ M G++ ++ T + L+AC L ++ +
Sbjct: 231 AKDVISWNAIISGYVHNGLGEEATKLYIIMLREGIKPDQATLIALLTACSSLALLRQGRS 290
Query: 281 IHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGN 340
H+ V+K L S+ + + ++ +Y KC N++ +E + + ++ S +++I Y+ G
Sbjct: 291 THAVVIKAMLESSISICNALMTMYSKCGNVDESELVFMSLKSQDIVSWNTIIAAYAQHGR 350
Query: 341 MEEARRHFDSLTE----KNVVVWTALFSGYVKAQNCE---ALFDLL-SEFVTKEGVVTDA 392
++ F + N + + ++ S A + LFDL+ S++ A
Sbjct: 351 YQKVIALFHEMELCGLIPNDITFLSMLSACGHAGRVDESLKLFDLMFSKYAISPRAEHYA 410
Query: 393 LILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQN 452
I+ IL A L+ A +YI M + +K + TL+ GN+ E+ +
Sbjct: 411 CIVDILSRAGQLEKAC-------SYIKEMPSEAEKNVWGTLLCASQTHGNVQLGELAAKM 463
Query: 453 FIERDLV---LYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+ D Y ++ YA G + + +M EKG+K
Sbjct: 464 LVLSDFESSGAYVMLSNIYAAAGMWGEVNRVRSQMKEKGVK 504
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 129/248 (52%), Gaps = 36/248 (14%)
Query: 22 TLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDS 81
T ++ +I Y +N+L E+RKLF+ MPE+NV + +I+ K DL+ AR LFD
Sbjct: 169 TRNLVSWAAMISGYVDNNMLEEARKLFEAMPEKNVVACTAMITGYCKEGDLQNARRLFDG 228
Query: 82 SPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNV 141
KD++++N+++ GY++ G +A KL+I M E I+ D+ T+ + L C L +
Sbjct: 229 IRAKDVISWNAIISGYVH-NGLGEEATKLYIIMLR--EGIKPDQATLIALLTACSSLALL 285
Query: 142 GFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAA 201
GR HA ++K ++S ++L+ MYSKC +E+ VF
Sbjct: 286 RQGRSTHAVVIKAMLESSISICNALMTMYSKCGNVDESELVF------------------ 327
Query: 202 CCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHT 261
M+LK+ D VSWNT+I+ Y Q+G ++ + LF M G+ N+ T
Sbjct: 328 --------MSLKS-------QDIVSWNTIIAAYAQHGRYQKVIALFHEMELCGLIPNDIT 372
Query: 262 FASALSAC 269
F S LSAC
Sbjct: 373 FLSMLSAC 380
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 9/112 (8%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L++ H IKA L + N L+ +YSK + ES +F + +++ SWNTII+A
Sbjct: 285 LRQGRSTHAVVIKAMLESSISICNALMTMYSKCGNVDESELVFMSLKSQDIVSWNTIIAA 344
Query: 66 CIKSHDLKQARSLFDSSPHKDL----VTYNSML--CGYINAEGYEADALKLF 111
+ ++ +LF L +T+ SML CG+ G ++LKLF
Sbjct: 345 YAQHGRYQKVIALFHEMELCGLIPNDITFLSMLSACGH---AGRVDESLKLF 393
>gi|224113417|ref|XP_002316490.1| predicted protein [Populus trichocarpa]
gi|222865530|gb|EEF02661.1| predicted protein [Populus trichocarpa]
Length = 492
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 161/530 (30%), Positives = 269/530 (50%), Gaps = 67/530 (12%)
Query: 130 STLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEE 189
S L C K G+ H +++ + + L++MYSKC AC+VF+ E
Sbjct: 3 SLLQFCAKNREPITGKACHGQVIRLGLETDTLTSNMLMNMYSKCGLIRRACKVFDEIPER 62
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
VSWN +I VQNG+ E+ + +F+
Sbjct: 63 ---------------------------------SMVSWNIMIGTCVQNGEEEKAIDIFLE 89
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
M G +E T +S + AC +V +++H++ +K + ++ FV + ++DVY KC
Sbjct: 90 MQREGSPCSEFTVSSVVCACAAKGDVFFCRQLHAFAIKAVVDADVFVGTALIDVYAKC-- 147
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
G++E+A F+ + E+N V W+++ +G+V+
Sbjct: 148 -----------------------------GSIEDASCVFEGMPERNDVTWSSIVAGFVQN 178
Query: 370 QNCEALFDLLSEFVTKE-GVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK 428
+ E L + KE G+ + ++ ++ ACA AAL G+++HA + R G +
Sbjct: 179 ELYEEGLVLFAR--GKEMGLENNQFMISSVIRACAGLAALIEGRQVHAIVCRTGFGPNNF 236
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
+ S LVDMY+KCG++ A ++F N ++++VL+N +I+ +A H + + LFEEM + G
Sbjct: 237 VASALVDMYAKCGSIEEAYVLFCNIEKKNVVLWNAIISGFAKHACSSEVMNLFEEMQQTG 296
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
++PD VT+VA+LSA H G V+ G YF+ MT ++ +SP HY+CM+D+ GR + +A
Sbjct: 297 MQPDEVTYVAVLSACVHVGLVDKGRSYFDLMTREHNVSPNVLHYSCMVDILGRGGLVHEA 356
Query: 549 IEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAE 608
E M +P A + GS L CR++ N ELA A + L +E + YV LAN YAA
Sbjct: 357 HELMTKMPFAATASMWGSLLASCRIHGNLELAEIAAKNLFEMEPDRGGNYVLLANTYAAS 416
Query: 609 GNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
W E + RK ++G + + G SW+ ++ ++H F G+ +HP+ IY
Sbjct: 417 KKWEEAAKARKSLKGSEILKERGKSWIEIKDKVHTFMAGERTHPRITDIY 466
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 141/483 (29%), Positives = 225/483 (46%), Gaps = 103/483 (21%)
Query: 12 CHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHD 71
CH Q I+ GL T+T+N L+++YSK L+R + K+FDE+PER++ SWN +I C+++
Sbjct: 20 CHGQVIRLGLETDTLTSNMLMNMYSKCGLIRRACKVFDEIPERSMVSWNIMIGTCVQN-- 77
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
G E A+ +F+EMQ E EFTV+S
Sbjct: 78 ------------------------------GEEEKAIDIFLEMQR--EGSPCSEFTVSSV 105
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
+ C +V F RQLHAF +K DA F ++LID+Y+KC E+A VFEG
Sbjct: 106 VCACAAKGDVFFCRQLHAFAIKAVVDADVFVGTALIDVYAKCGSIEDASCVFEG------ 159
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
PE ND V+W+++++G+VQN EEGL LF R
Sbjct: 160 --------------------------MPERND-VTWSSIVAGFVQNELYEEGLVLFARGK 192
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
E G+ N+ +S + AC GL + +++H+ V + G N FV+S +VD+Y KC
Sbjct: 193 EMGLENNQFMISSVIRACAGLAALIEGRQVHAIVCRTGFGPNNFVASALVDMYAKC---- 248
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
G++EEA F ++ +KNVV+W A+ SG+ K
Sbjct: 249 ---------------------------GSIEEAYVLFCNIEKKNVVLWNAIISGFAKHAC 281
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR-MGVQMDKKLI 430
+ +L E + + G+ D + V +L AC + G+ + R V +
Sbjct: 282 SSEVMNLFEE-MQQTGMQPDEVTYVAVLSACVHVGLVDKGRSYFDLMTREHNVSPNVLHY 340
Query: 431 STLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
S +VD+ + G + A E++ + ++ ++A HG+ E A + + + E +
Sbjct: 341 SCMVDILGRGGLVHEAHELMTKMPFAATASMWGSLLASCRIHGNLELAEIAAKNLFE--M 398
Query: 490 KPD 492
+PD
Sbjct: 399 EPD 401
>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 173/621 (27%), Positives = 304/621 (48%), Gaps = 78/621 (12%)
Query: 57 FSWNTIISACIKSHDLKQARSLFDSSPHK-DLVTYNSMLCGYINAEGYEADALKLFIEMQ 115
S ++I+ K + + A S+F H+ ++ +N+++ G+I G+ + + + +M+
Sbjct: 73 LSITSLINMYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFIT-NGFPEEGFEFYQKMR 131
Query: 116 SADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRC 175
+E + D+FT + C+ +L + +++H + K + F S+L++ Y K
Sbjct: 132 --NEGVIPDKFTFPCAIKACLDVLEI---KKIHGLLFKFGLELDVFIGSALVNCYLKF-- 184
Query: 176 YEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYV 235
G ME A F P + D V WN +++GY
Sbjct: 185 ------------------------------GLMEHAQVAFEELP-IRDVVLWNAMVNGYA 213
Query: 236 QNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF 295
Q G E L+ F RM + V + T LS + ++ + IH + +K G S
Sbjct: 214 QIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVA 273
Query: 296 VSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKN 355
VS+ ++D+Y KC+ + E+A F+ + EK+
Sbjct: 274 VSNSLIDMYGKCKCI-------------------------------EDALEIFEMMREKD 302
Query: 356 VVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIH 415
+ W ++ S + + + + LL + G+ D + + +L AC+ AAL G+EIH
Sbjct: 303 IFSWNSIVSVHEQCGDHDGTLRLLDRMLGA-GIQPDLVTVTTVLPACSHLAALMHGREIH 361
Query: 416 AYILRMGVQMDKK------LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYA 469
Y++ G+ D K L + ++DMY+KCG+M A ++F+ +D+ +N+MI Y
Sbjct: 362 GYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYG 421
Query: 470 HHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPET 529
HG+ +A+ +F M E +KPD VTFV +LSA H G V G + M + Y ++P
Sbjct: 422 MHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTI 481
Query: 530 DHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLR 589
+HY C+ID+ GRA QL++A E ++P E + V+ + L CRL+++A LA A +++
Sbjct: 482 EHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFE 541
Query: 590 LEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDV 649
LE + YV ++NVY A G + E+ +R MR + GCSW+ +++ +H+F D
Sbjct: 542 LEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADR 601
Query: 650 SHPKTNAIYSVLAIFTGELYE 670
+HP+ ++IY+ L T L E
Sbjct: 602 AHPEAHSIYAGLNSLTARLRE 622
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 185/427 (43%), Gaps = 72/427 (16%)
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
T ++L N+ G+++H++M+ S +++SLI+MYSKC A +F
Sbjct: 39 TCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDP 98
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
T E+N+ + +N +ISG++ NG EEG +
Sbjct: 99 THEINVFA--------------------------------FNAIISGFITNGFPEEGFEF 126
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
+ +M GV ++ TF A+ AC + + K+IH + K GL + F+ S +V+ Y K
Sbjct: 127 YQKMRNEGVIPDKFTFPCAIKACLDVLEI---KKIHGLLFKFGLELDVFIGSALVNCYLK 183
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
G ME A+ F+ L ++VV+W A+ +GY
Sbjct: 184 F-------------------------------GLMEHAQVAFEELPIRDVVLWNAMVNGY 212
Query: 367 VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMD 426
+ E + + + E VV + +L A+ L+ G+ IH + ++MG
Sbjct: 213 AQIGQFEMVLETFRR-MNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSG 271
Query: 427 KKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
+ ++L+DMY KC + A IF+ E+D+ +N +++ + G + + L + ML
Sbjct: 272 VAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLG 331
Query: 487 KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTA-----DYKISPETDHYACMIDLYGR 541
GI+PD VT +L A H ++ G + M D K + +ID+Y +
Sbjct: 332 AGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAK 391
Query: 542 ANQLEKA 548
+ A
Sbjct: 392 CGSMRDA 398
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 120/477 (25%), Positives = 207/477 (43%), Gaps = 104/477 (21%)
Query: 47 LFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEAD 106
LF E +VF + +++ +K ++ A+ F+ P +D+V +N+M+ GY +E
Sbjct: 162 LFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEM- 220
Query: 107 ALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVS-S 165
L+ F M DE + FTVT L++ + ++ GR +H F +K D SG AVS S
Sbjct: 221 VLETFRRMN--DESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYD-SGVAVSNS 277
Query: 166 LIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAV 225
LIDMY KC+C E+A +FE E+ D
Sbjct: 278 LIDMYGKCKCIEDALEIFEMMREK---------------------------------DIF 304
Query: 226 SWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWV 285
SWN+++S + Q GD + L+L RM G++ + T + L AC L + +EIH ++
Sbjct: 305 SWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYM 364
Query: 286 LKNGL------ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQG 339
+ +GL I + + + ++D+Y KC G
Sbjct: 365 IVSGLGKDGKDIDDVLLKNAVIDMYAKC-------------------------------G 393
Query: 340 NMEEARRHFDSLTEKNVVVWTALFSGY-VKAQNCEAL--FDLLSEFVTKEGVVTDALILV 396
+M +A F+ ++ K+V W + GY + EAL F + E K D + V
Sbjct: 394 SMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLK----PDEVTFV 449
Query: 397 ILLGACALQAALHPGKEIHAYILRMGVQMDKKLI----STLVDMYSKCGNMTYA-EIIFQ 451
+L AC+ + G+ ++++M + D + ++DM + G + A E+
Sbjct: 450 GVLSACSHAGFVSQGRN---FLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALT 506
Query: 452 NFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGS 508
IE + V++ ++A H H A + + + E ++P+ HCGS
Sbjct: 507 MPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFE--LEPE------------HCGS 549
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 147/319 (46%), Gaps = 46/319 (14%)
Query: 257 WNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESM 316
+N T ++L A +N+ KEIHS++L NG +++P + ++++Y KC MN+A S+
Sbjct: 35 YNLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSI 94
Query: 317 LLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALF 376
FS D E NV + A+ SG++ E F
Sbjct: 95 ---------FS---------------------DPTHEINVFAFNAIISGFITNGFPEEGF 124
Query: 377 DLLSEFVTKEGVVTDALILVILLGACALQAALH--PGKEIHAYILRMGVQMDKKLISTLV 434
+ + + EGV+ D CA++A L K+IH + + G+++D + S LV
Sbjct: 125 EFYQK-MRNEGVIPDKFTF-----PCAIKACLDVLEIKKIHGLLFKFGLELDVFIGSALV 178
Query: 435 DMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAV 494
+ Y K G M +A++ F+ RD+VL+N M+ YA G E + F M ++ + P
Sbjct: 179 NCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRF 238
Query: 495 TFVAILSAFRHCGSVEMGE---KYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
T +LS F G + G + M D ++ +ID+YG+ +E A+E
Sbjct: 239 TVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNS----LIDMYGKCKCIEDALEI 294
Query: 552 MKSIPTEEDAVILGSFLNV 570
+ + E+D S ++V
Sbjct: 295 FEMM-REKDIFSWNSIVSV 312
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 114/271 (42%), Gaps = 73/271 (26%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L I H A+K G +N LI +Y K + ++ ++F+ M E+++FSWN+I+S
Sbjct: 252 DLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVS 311
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
H+ CG + +G L+L M A I+ D
Sbjct: 312 V------------------HEQ--------CG--DHDG----TLRLLDRMLGAG--IQPD 337
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV------SSLIDMYSKCRCYEE 178
TVT+ L C L + GR++H +M+ + G + +++IDMY+KC +
Sbjct: 338 LVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRD 397
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
A VFE + + D SWN +I GY +G
Sbjct: 398 AHLVFERMSNK---------------------------------DVASWNIMIMGYGMHG 424
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
E L++F RM E ++ +E TF LSAC
Sbjct: 425 YGNEALEMFSRMCEVQLKPDEVTFVGVLSAC 455
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 117/284 (41%), Gaps = 32/284 (11%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
M ++ L+ + A L + + IH Y + L + K D+ V N
Sbjct: 329 MLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDD-----VLLKN 383
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
+I K ++ A +F+ +KD+ ++N M+ GY GY +AL++F M +
Sbjct: 384 AVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGY-GMHGYGNEALEMFSRM--CEVQ 440
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMV--KTSNDASGFA--VSSLIDMYSKCRCY 176
++ DE T L+ C + GF Q F+V K+ D + + +IDM +
Sbjct: 441 LKPDEVTFVGVLSACS---HAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQL 497
Query: 177 EEACRVFEGCTEEVNLISKNAMVAACCREGEMEM----ALKTFWRQPELNDAVSWNTLIS 232
+EA + E N + A++AAC + A + F +PE S+ + +
Sbjct: 498 DEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPE--HCGSYVLMSN 555
Query: 233 GYVQNGDAEEGLKLFVRMGENGVR------WNE-----HTFASA 265
Y G EE L++ M + VR W E H F SA
Sbjct: 556 VYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSA 599
>gi|297830924|ref|XP_002883344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329184|gb|EFH59603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 824
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 192/619 (31%), Positives = 308/619 (49%), Gaps = 70/619 (11%)
Query: 46 KLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEA 105
KL DE +++F ++ IS + DL+ +R +FDS +++ +N+M+ Y+ +
Sbjct: 246 KLGDEYV-KDLFVVSSAISMYAELGDLESSRRVFDSCVERNIEVWNTMIGVYVQNDCL-V 303
Query: 106 DALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS 165
++++LF+E + E I DE T + L V GRQ H F+ K + ++S
Sbjct: 304 ESIELFLEAIGSKE-IVSDEVTFLLAASAVSGLQQVELGRQFHGFVSKNFRELPIVIINS 362
Query: 166 LIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAV 225
L+ MYS+C +++ VF E D V
Sbjct: 363 LMVMYSRCGFVQKSFGVFHSMRER---------------------------------DVV 389
Query: 226 SWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWV 285
SWNT+IS +VQNG +EGL L M + G + + T + LSA LRN + K+ H ++
Sbjct: 390 SWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHGFL 449
Query: 286 LKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEAR 345
++ G I ++S ++D+Y K + ++ L +G GY+
Sbjct: 450 IRQG-IQFEGMNSYLIDMYAKSGLIRISQK--LFEGS-----------GYA--------- 486
Query: 346 RHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQ 405
E++ W ++ SGY + + E F + + + ++ + +A+ + +L AC+
Sbjct: 487 -------ERDQATWNSMISGYTQNGHTEETFLVFRKML-EQNIRPNAVTVASILPACSQV 538
Query: 406 AALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMI 465
++ GK++H + +R + + + S LVDMYSK G + YAE +F ER+ V Y MI
Sbjct: 539 GSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAENMFSQTKERNSVTYTTMI 598
Query: 466 ACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKI 525
Y HG E+AI LF M E GIKPDA+ FVA+LSA + G V+ G K F M Y I
Sbjct: 599 LGYGQHGMGERAISLFLSMQELGIKPDAIAFVAVLSACSYSGLVDEGLKIFEDMREVYNI 658
Query: 526 SPETDHYACMIDLYGRANQLEKAIEFMKSIPTEED-AVILGSFLNVCRLNRNAELAGEAE 584
P ++HY C+ D+ GR ++ +A EF+K + E + A + GS L CRL+ ELA
Sbjct: 659 QPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCRLHGELELAETVS 718
Query: 585 EKLLRLE-GNNKARY-VQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIH 642
E+L +L+ G N + Y V L+N+YA E NW + R+RK MR + G S + V ++
Sbjct: 719 ERLAKLDKGKNFSGYEVLLSNMYAEEQNWKSVDRVRKGMREKGLKKEVGRSGIEVAGHVN 778
Query: 643 IFTVGDVSHPKTNAIYSVL 661
F D HP + IY +
Sbjct: 779 CFVSRDQEHPHSGEIYDAI 797
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 131/538 (24%), Positives = 242/538 (44%), Gaps = 66/538 (12%)
Query: 75 ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNL 134
AR LFD+ P V +N+++ G+I +AL + M+ + D +T +STL
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFI-CNNLPHEALLFYSRMKKTAPFTKCDAYTYSSTLKA 116
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
C + N+ G+ +H +++ ++S +SL++MY C E++
Sbjct: 117 CAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSC---------LNAPGSELDCF- 166
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
E ++ K F N V+WNTLIS YV+ G E + F M
Sbjct: 167 ------------EYDVVRKVFDNMRRKN-VVAWNTLISWYVKTGRNAEACRQFAIMMRME 213
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
++ + +F + A R++K A + +LK G D Y
Sbjct: 214 IKPSPVSFVNVFPAVATSRSIKKANVFYGLMLKLG------------DEY---------- 251
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEA 374
V++ F +SS I Y+ G++E +RR FDS E+N+ VW + YV+
Sbjct: 252 -------VKDLFVVSSAISMYAELGDLESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVE 304
Query: 375 LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLV 434
+L E + + +V+D + ++ A + + G++ H ++ + ++ +I++L+
Sbjct: 305 SIELFLEAIGSKEIVSDEVTFLLAASAVSGLQQVELGRQFHGFVSKNFRELPIVIINSLM 364
Query: 435 DMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAV 494
MYS+CG + + +F + ERD+V +N MI+ + +G +++ ++L EM ++G K D +
Sbjct: 365 VMYSRCGFVQKSFGVFHSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYI 424
Query: 495 TFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE-FMK 553
T A+LSA + + E+G++ + + Y +ID+Y ++ + + + F
Sbjct: 425 TVTALLSAASNLRNKEIGKQTHGFLIRQGIQFEGMNSY--LIDMYAKSGLIRISQKLFEG 482
Query: 554 SIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLL----RLEGNNKARYVQLANVYAA 607
S E D S ++ N G EE L LE N + V +A++ A
Sbjct: 483 SGYAERDQATWNSMISGYTQN------GHTEETFLVFRKMLEQNIRPNAVTVASILPA 534
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 178/389 (45%), Gaps = 36/389 (9%)
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
F T S + ++ C+EG ++A + F P+ V WNT+I G++ N
Sbjct: 29 TFSPPTLTPQTPSIRSRLSKICQEGNPQLARQLFDAIPKPT-TVLWNTIIIGFICNNLPH 87
Query: 242 EGLKLFVRMGENG--VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
E L + RM + + + +T++S L AC +N+K K +H +++ S+ V +
Sbjct: 88 EALLFYSRMKKTAPFTKCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNS 147
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
++++Y C N +E V R+ FD++ KNVV W
Sbjct: 148 LMNMYVSCLNAPGSELDCFEYDV---------------------VRKVFDNMRRKNVVAW 186
Query: 360 TALFSGYVK-AQNCEAL--FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHA 416
L S YVK +N EA F ++ K V+ V + A A ++ +
Sbjct: 187 NTLISWYVKTGRNAEACRQFAIMMRMEIKPSPVS----FVNVFPAVATSRSIKKANVFYG 242
Query: 417 YILRMGVQMDKKL--ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
+L++G + K L +S+ + MY++ G++ + +F + +ER++ ++N MI Y +
Sbjct: 243 LMLKLGDEYVKDLFVVSSAISMYAELGDLESSRRVFDSCVERNIEVWNTMIGVYVQNDCL 302
Query: 475 EKAILLFEEML-EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA 533
++I LF E + K I D VTF+ SA VE+G ++ ++ +++ P +
Sbjct: 303 VESIELFLEAIGSKEIVSDEVTFLLAASAVSGLQQVELGRQFHGFVSKNFRELPIVIINS 362
Query: 534 CMIDLYGRANQLEKAIEFMKSIPTEEDAV 562
M+ +Y R ++K+ S+ E D V
Sbjct: 363 LMV-MYSRCGFVQKSFGVFHSM-RERDVV 389
>gi|15222917|ref|NP_175445.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213175|sp|Q9SX45.1|PPR75_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g50270
gi|5734776|gb|AAD50041.1|AC007980_6 Hypothetical protein [Arabidopsis thaliana]
gi|332194410|gb|AEE32531.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 160/518 (30%), Positives = 263/518 (50%), Gaps = 67/518 (12%)
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
Q HA +VK D+ F +SLI YS ++ A R+F+G ++
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDK---------------- 167
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASA 265
D V+W +I G+V+NG A E + FV M + GV NE T S
Sbjct: 168 -----------------DVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSV 210
Query: 266 LSACCGLRNVKCAKEIHSWVLKNGLIS-NPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
L A + +V+ + +H L+ G + + F+ S +VD+Y KC +
Sbjct: 211 LKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYD------------- 257
Query: 325 SFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVT 384
+A++ FD + +NVV WTAL +GYV+++ C L+ E +
Sbjct: 258 ------------------DAQKVFDEMPSRNVVTWTALIAGYVQSR-CFDKGMLVFEEML 298
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
K V + L +L ACA ALH G+ +H Y+++ ++++ +TL+D+Y KCG +
Sbjct: 299 KSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLE 358
Query: 445 YAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR 504
A ++F+ E+++ + MI +A HG+ A LF ML + P+ VTF+A+LSA
Sbjct: 359 EAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACA 418
Query: 505 HCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVIL 564
H G VE G + F SM + + P+ DHYACM+DL+GR LE+A ++ +P E V+
Sbjct: 419 HGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVW 478
Query: 565 GSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGM 624
G+ C L+++ EL A ++++L+ ++ RY LAN+Y+ NW E+ R+RKQM+
Sbjct: 479 GALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQ 538
Query: 625 KGNRFAGCSWVYVEHEIHIFTVGDVSHP-KTNAIYSVL 661
+ + G SW+ V+ ++ F D P +++ +Y L
Sbjct: 539 QVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTL 576
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 118/460 (25%), Positives = 204/460 (44%), Gaps = 87/460 (18%)
Query: 34 IYSKHN---LLRESRKLFDEMP------------ERNVFSWNTIISACIKSHDLKQARSL 78
I S+H LL+ KL D P + + F N++IS S A L
Sbjct: 101 IPSRHTFPPLLKAVFKLRDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRL 160
Query: 79 FDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKL 138
FD + KD+VT+ +M+ G++ G ++A+ F+EM+ + +E TV S L K+
Sbjct: 161 FDGAEDKDVVTWTAMIDGFVR-NGSASEAMVYFVEMKKTG--VAANEMTVVSVLKAAGKV 217
Query: 139 LNVGFGRQLHAFMVKTSN-DASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNA 197
+V FGR +H ++T F SSL+DMY KC CY++A +VF+ + S+N
Sbjct: 218 EDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFD------EMPSRN- 270
Query: 198 MVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRW 257
V+W LI+GYVQ+ ++G+ +F M ++ V
Sbjct: 271 --------------------------VVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAP 304
Query: 258 NEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESML 317
NE T +S LSAC + + + +H +++KN + N + ++D+Y KC
Sbjct: 305 NEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKC---------- 354
Query: 318 LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFD 377
G +EEA F+ L EKNV WTA+ +G+ FD
Sbjct: 355 ---------------------GCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFD 393
Query: 378 LLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL-RMGVQMDKKLISTLVDM 436
L ++ V + + + +L ACA + G+ + + R ++ + +VD+
Sbjct: 394 LFYTMLSSH-VSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDL 452
Query: 437 YSKCGNMTYAEIIFQNF-IERDLVLYNVMI-ACYAHHGHE 474
+ + G + A+ + + +E V++ + +C H +E
Sbjct: 453 FGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYE 492
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 150/327 (45%), Gaps = 39/327 (11%)
Query: 227 WNTLISGYVQNG---DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHS 283
W++LI G+ G + + M NGV + HTF L A LR+ + H+
Sbjct: 70 WDSLI-GHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSN-PFQFHA 127
Query: 284 WVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEE 343
++K GL S+PF VRN S+I GYS G +
Sbjct: 128 HIVKFGLDSDPF--------------------------VRN-----SLISGYSSSGLFDF 156
Query: 344 ARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACA 403
A R FD +K+VV WTA+ G+V+ + E + K GV + + +V +L A
Sbjct: 157 ASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVE-MKKTGVAANEMTVVSVLKAAG 215
Query: 404 LQAALHPGKEIHAYILRMG-VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYN 462
+ G+ +H L G V+ D + S+LVDMY KC A+ +F R++V +
Sbjct: 216 KVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWT 275
Query: 463 VMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTAD 522
+IA Y +K +L+FEEML+ + P+ T ++LSA H G++ G + M +
Sbjct: 276 ALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKN 335
Query: 523 YKISPETDHYACMIDLYGRANQLEKAI 549
I T +IDLY + LE+AI
Sbjct: 336 -SIEINTTAGTTLIDLYVKCGCLEEAI 361
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 128/274 (46%), Gaps = 41/274 (14%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPER-----N 55
+R+ + EA++ V+ K G+ +T ++ K +R R + E +
Sbjct: 180 VRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCD 239
Query: 56 VFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQ 115
VF ++++ K A+ +FD P +++VT+ +++ GY+ + ++ L +F EM
Sbjct: 240 VFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGML-VFEEML 298
Query: 116 SADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRC 175
+D + +E T++S L+ C + + GR++H +M+K S + + A ++LID+Y KC C
Sbjct: 299 KSD--VAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGC 356
Query: 176 YEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYV 235
EEA VFE E+ + +W +I+G+
Sbjct: 357 LEEAILVFERLHEK---------------------------------NVYTWTAMINGFA 383
Query: 236 QNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
+G A + LF M + V NE TF + LSAC
Sbjct: 384 AHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSAC 417
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 97/218 (44%), Gaps = 6/218 (2%)
Query: 344 ARRHFDSLTEKNVVVWTAL---FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLG 400
ARR L ++ +W +L FSG + L L + + GV+ LL
Sbjct: 55 ARRLLCQLQTLSIQLWDSLIGHFSGGITLN--RRLSFLAYRHMRRNGVIPSRHTFPPLLK 112
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL 460
A +P + HA+I++ G+ D + ++L+ YS G +A +F ++D+V
Sbjct: 113 AVFKLRDSNPF-QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVT 171
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
+ MI + +G +A++ F EM + G+ + +T V++L A V G
Sbjct: 172 WTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYL 231
Query: 521 ADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE 558
++ + + ++D+YG+ + + A + +P+
Sbjct: 232 ETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSR 269
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 149/439 (33%), Positives = 245/439 (55%), Gaps = 5/439 (1%)
Query: 223 DAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIH 282
+ S++ +I +VQ+ + + +M GV N TF+S L +C +++ K +H
Sbjct: 109 NVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSC----SLESGKVLH 164
Query: 283 SWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNME 342
+K GL S+ +V +G+VDVY + ++ A + R+ S+++M+ YS G ++
Sbjct: 165 CQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELD 224
Query: 343 EARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGAC 402
+AR F+ + E++VV W + GY ++ L + + + + +L +L AC
Sbjct: 225 KARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVL-SAC 283
Query: 403 ALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYN 462
AL G+ IH+YI G+Q++ + + L+DMYSKCG++ A ++F ++D+V +N
Sbjct: 284 GQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWN 343
Query: 463 VMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTAD 522
MI YA HG + A+ LFEEM E G KP +TF+ ILSA H G VE G +F M
Sbjct: 344 SMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDK 403
Query: 523 YKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGE 582
Y I P+ +HY CM++L GRA LE+A +K++ D V+ G+ L CRL+ N +L E
Sbjct: 404 YGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEE 463
Query: 583 AEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIH 642
+ L+ + N YV L+N+YAA GNW + ++R M+ + GCS + V++++H
Sbjct: 464 IAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVH 523
Query: 643 IFTVGDVSHPKTNAIYSVL 661
F G+ HPK+ IY +L
Sbjct: 524 EFVAGERKHPKSKEIYVML 542
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 135/269 (50%), Gaps = 36/269 (13%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
++S +L+ + H QAIK GL L+ +Y++ + +R+LFD+MPER++ S
Sbjct: 152 LKSCSLESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLT 211
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
T+++ K +L +ARSLF+ +D+V +N M+ GY + G ++LKLF M A
Sbjct: 212 TMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQS-GVPNESLKLFRRMLVAKA- 269
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
+E TV + L+ C +L + GR +H+++ + ++LIDMYSKC E+A
Sbjct: 270 -IPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDAR 328
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
VF+ ++ D V+WN++I GY +G +
Sbjct: 329 LVFDRIRDK---------------------------------DVVAWNSMIVGYAMHGFS 355
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSAC 269
+ L+LF M E G + + TF LSAC
Sbjct: 356 QHALQLFEEMTETGHKPTDITFIGILSAC 384
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 120/490 (24%), Positives = 206/490 (42%), Gaps = 78/490 (15%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
+S ++ L H ++ GL I +L Y+ L S +F+ E NVFS++
Sbjct: 56 KSKSVAHLLQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSA 115
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
II + ++S LFD A GY + L +E +
Sbjct: 116 IIHSHVQSR-------LFD------------------RAFGYYSQMLSCGVEPNA----- 145
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
FT +S L C ++ G+ LH +K + + + L+D+Y++ A +
Sbjct: 146 ----FTFSSVLKSC----SLESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQ 197
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F+ E +L+S M+ + GE++ A F E D V WN +I GY Q+G
Sbjct: 198 LFDKMPER-SLVSLTTMLTCYSKMGELDKARSLFEGMKE-RDVVCWNVMIGGYAQSGVPN 255
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E LKLF RM NE T + LSAC L ++ + IHS++ G+ N V + ++
Sbjct: 256 ESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALI 315
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D+Y KC G++E+AR FD + +K+VV W +
Sbjct: 316 DMYSKC-------------------------------GSLEDARLVFDRIRDKDVVAWNS 344
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL-R 420
+ GY + L E +T+ G + + +L AC + G+ + +
Sbjct: 345 MIVGYAMHGFSQHALQLFEE-MTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDK 403
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGH----EE 475
G++ + +V++ + G++ A + +N I D VL+ ++ C H + EE
Sbjct: 404 YGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEE 463
Query: 476 KAILLFEEML 485
A L ++ L
Sbjct: 464 IAKFLVDQKL 473
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 74/164 (45%), Gaps = 20/164 (12%)
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
+IHA +LR G+ + L L Y+ G + + +F F E ++ ++ +I +
Sbjct: 65 QIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSR 124
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSA-------FRHCGSVEMGEKYFNSMTADYKI 525
++A + +ML G++P+A TF ++L + HC ++++G + +D +
Sbjct: 125 LFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLG------LGSDLYV 178
Query: 526 SPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLN 569
++D+Y R + A + +P E V L + L
Sbjct: 179 R------TGLVDVYARGGDVVCARQLFDKMP-ERSLVSLTTMLT 215
>gi|347954472|gb|AEP33736.1| chlororespiratory reduction 21, partial [Raphanus sativus]
Length = 806
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 189/700 (27%), Positives = 330/700 (47%), Gaps = 112/700 (16%)
Query: 13 HVQAIKAGLTLTTI-TTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHD 71
H K+GL + + L +Y K +L ++RK+FDE+PERNV +W
Sbjct: 170 HGYVAKSGLYGDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAW------------ 217
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
N+++ GY+ G +A++L +M+ +E + TV++
Sbjct: 218 -------------------NALMVGYVQ-NGMNEEAIRLMCDMR--EEGVEPTRVTVSTC 255
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L+ + VG G+Q HA V + +S+++ Y K E A VF+
Sbjct: 256 LSASANMCGVGEGKQSHAVAVVNGLEMDNILGTSVLNFYCKVGLIEYAEMVFD------R 309
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
+I K D V+WN LISGYVQ G E+ +++ M
Sbjct: 310 MIGK---------------------------DVVTWNLLISGYVQQGLVEDAIRMCKLMR 342
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM- 310
++++ T ++ +SA +N K KE+ + +++ S+ ++S ++D+Y KC ++
Sbjct: 343 LEKLKFDCVTLSTLMSAAARTQNSKLGKEVQCYCIRHSFESDIGLASTVIDMYAKCGSIV 402
Query: 311 ----------------------NYAESMLLLKGVR------------NSFSISSMIVGYS 336
YAES L + +R N+ + + +I+
Sbjct: 403 DAKRVFDSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNAITWNLIILSLF 462
Query: 337 LQGNMEEARRHFDSLTEKNVVV----WTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDA 392
G ++EA+ F + +V WT + +G V+ E L + + + G+ +
Sbjct: 463 RNGQVDEAKEMFLQMQSSGIVPTLVSWTTMMNGLVQNGCSEEAVHYLRK-MQESGLRPNV 521
Query: 393 LILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST-LVDMYSKCGNMTYAEIIFQ 451
+ + L ACA A+LH G+ +H YI+R + I T L+DMY+KCG+++ AE +F+
Sbjct: 522 FSITVALSACANLASLHLGRSVHGYIIRNQLHSSSVSIETALIDMYAKCGDISKAEKVFK 581
Query: 452 NFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEM 511
+L L+N MI+ YA G+ ++AI L+ + + GIKPD +TF +LSA H G +
Sbjct: 582 RKSYSELPLFNAMISAYALSGNVKEAIDLYRSLEDMGIKPDNITFTNVLSACNHAGDINQ 641
Query: 512 GEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVC 571
+ F+ M + + + P +HY M+DL A + EKA+ M+ +P + DA ++ S L C
Sbjct: 642 AIEIFSDMVSKHGMEPCLEHYGLMVDLLASAGETEKALRLMEEMPYKPDARMIQSLLVTC 701
Query: 572 RLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAG 631
EL +LL E +N YV ++N YA EG+W E+ ++R+ M+ + G
Sbjct: 702 NEEHKTELVDYLSRQLLESEPDNSGNYVTISNAYAGEGSWDEVVKMREMMKDKGLKKKPG 761
Query: 632 CSWVYVE---HEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
CSW+ ++ E+H+F D +H + N I +LA+ ++
Sbjct: 762 CSWIQIKGXXEEVHVFVANDKTHLRNNEIRRMLALLLHDM 801
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 148/529 (27%), Positives = 235/529 (44%), Gaps = 105/529 (19%)
Query: 30 QLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVT 89
+L+ Y+K + + LF ++ RNVFSW II
Sbjct: 86 KLVIFYAKCDAHEIAETLFSKLRVRNVFSWAAIIG------------------------- 120
Query: 90 YNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHA 149
+ C AEG AL F+EM + I D F V + C L GFGR +H
Sbjct: 121 ---VKCRVGLAEG----ALMGFVEM--LKDEIFPDNFVVPNVCKACGALQWSGFGRGIHG 171
Query: 150 FMVKTS--NDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGE 207
++ K+ D F SSL DMY KC ++A +VF+
Sbjct: 172 YVAKSGLYGDCV-FVASSLADMYGKCGVLDDARKVFD----------------------- 207
Query: 208 MEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALS 267
PE N V+WN L+ GYVQNG EE ++L M E GV T ++ LS
Sbjct: 208 ---------EIPERN-VVAWNALMVGYVQNGMNEEAIRLMCDMREEGVEPTRVTVSTCLS 257
Query: 268 ACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFS 327
A + V K+ H+ + NGL + + + +++ YCK + YAE +
Sbjct: 258 ASANMCGVGEGKQSHAVAVVNGLEMDNILGTSVLNFYCKVGLIEYAEMV----------- 306
Query: 328 ISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEG 387
FD + K+VV W L SGYV+ E + + + E
Sbjct: 307 --------------------FDRMIGKDVVTWNLLISGYVQQGLVEDAIR-MCKLMRLEK 345
Query: 388 VVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAE 447
+ D + L L+ A A GKE+ Y +R + D L ST++DMY+KCG++ A+
Sbjct: 346 LKFDCVTLSTLMSAAARTQNSKLGKEVQCYCIRHSFESDIGLASTVIDMYAKCGSIVDAK 405
Query: 448 IIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTF-VAILSAFRHC 506
+F + +++DL+L+N ++A YA G +A+ LF EM + + P+A+T+ + ILS FR+
Sbjct: 406 RVFDSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNAITWNLIILSLFRN- 464
Query: 507 GSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSI 555
G V+ ++ F M + I P + M++ + E+A+ +++ +
Sbjct: 465 GQVDEAKEMFLQMQSS-GIVPTLVSWTTMMNGLVQNGCSEEAVHYLRKM 512
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 118/492 (23%), Positives = 205/492 (41%), Gaps = 76/492 (15%)
Query: 80 DSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLL 139
D P S LC G +AL L EM ++R+ L CV
Sbjct: 5 DDQPRNPYFHRVSSLC----KNGEIREALSLVTEMDF--RNVRIGPEIYGEILQGCVYER 58
Query: 140 NVGFGRQLHAFMVKTSN--DASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNA 197
+ GRQ+HA ++K + + + L+ Y+KC +E A
Sbjct: 59 DFHTGRQIHARILKNGEFYAKNEYIETKLVIFYAKCDAHEIA------------------ 100
Query: 198 MVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRW 257
+T + + + + SW +I + G AE L FV M ++ +
Sbjct: 101 ---------------ETLFSKLRVRNVFSWAAIIGVKCRVGLAEGALMGFVEMLKDEIFP 145
Query: 258 NEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISN-PFVSSGIVDVYCKCENMNYAESM 316
+ + AC L+ + IH +V K+GL + FV+S + D+Y KC
Sbjct: 146 DNFVVPNVCKACGALQWSGFGRGIHGYVAKSGLYGDCVFVASSLADMYGKC--------- 196
Query: 317 LLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALF 376
G +++AR+ FD + E+NVV W AL GYV+ E
Sbjct: 197 ----------------------GVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAI 234
Query: 377 DLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDM 436
L+ + + +EGV + + L A A + GK+ HA + G++MD L +++++
Sbjct: 235 RLMCD-MREEGVEPTRVTVSTCLSASANMCGVGEGKQSHAVAVVNGLEMDNILGTSVLNF 293
Query: 437 YSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTF 496
Y K G + YAE++F I +D+V +N++I+ Y G E AI + + M + +K D VT
Sbjct: 294 YCKVGLIEYAEMVFDRMIGKDVVTWNLLISGYVQQGLVEDAIRMCKLMRLEKLKFDCVTL 353
Query: 497 VAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIP 556
++SA + ++G K + + + +ID+Y + + A S
Sbjct: 354 STLMSAAARTQNSKLG-KEVQCYCIRHSFESDIGLASTVIDMYAKCGSIVDAKRVFDST- 411
Query: 557 TEEDAVILGSFL 568
++D ++ + L
Sbjct: 412 VQKDLILWNTLL 423
>gi|449439011|ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 787
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 178/618 (28%), Positives = 292/618 (47%), Gaps = 101/618 (16%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L ++ H +A+ +G + N L+ +Y + +R++F+ M +R+V SWNT+IS
Sbjct: 200 LNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISG 259
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
+ + P + L +NSM+ D + D
Sbjct: 260 WFQ-----------NGRPEEALAVFNSMM-----------------------DARVEPDS 285
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
T+ S L C L + G ++H + K ++L+DMYS+C +EA VF
Sbjct: 286 ATIVSALPSCGHLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMDEASLVFAE 345
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
E+ D ++W ++I+GY+ NG+A+ L
Sbjct: 346 TKEK---------------------------------DVITWTSMINGYIMNGNAKSALA 372
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
L M +GV N T AS LSAC L +K K +H+WV++ L S+ V + ++D+Y
Sbjct: 373 LCPAMQLDGVVPNAVTLASLLSACASLCCLKQGKSLHAWVMRKKLDSDVLVVTALIDMYA 432
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
KC ++Y SF + F + K V W AL SG
Sbjct: 433 KCNAVSY------------SFQV-------------------FAKTSMKRTVPWNALLSG 461
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
+ + L + +E V + ++ A A+ A L +H+Y++R G
Sbjct: 462 LIHNELAREAVGLFKSMLIEE-VEANHATFNSVIPAYAILADLKQVMNLHSYLVRSGFIS 520
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFI--ERDLVLYNVMIACYAHHGHEEKAILLFEE 483
+I+ L+DMYSKCG++ YA IF E+D+++++V+IA Y HGH E A+LLF +
Sbjct: 521 KIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQ 580
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRAN 543
M+ G++P+ +TF ++L A H G V+ G F M +Y SP +HY C++DL GRA
Sbjct: 581 MVHSGMQPNEITFTSVLHACSHRGLVDDGLTLFKYMIENYPSSPLPNHYTCVVDLLGRAG 640
Query: 544 QLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLAN 603
+L++A + +KS+P +++ I G+ L C +++N EL A E+L LE + Y+ LAN
Sbjct: 641 RLDEAYDLIKSMPFQQNHSIWGALLGACLIHQNVELGEVAAERLFELEPESTGNYILLAN 700
Query: 604 VYAAEGNWAEMGRIRKQM 621
+YAA G W + + Q+
Sbjct: 701 IYAAVGRWKDAENHKLQL 718
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 139/578 (24%), Positives = 254/578 (43%), Gaps = 116/578 (20%)
Query: 8 EALICHVQAIKA--------GLTLTT--ITTNQLIHI-------YSKHNLLRESRKLFDE 50
++L+CH A ++ G T+T+ + + IH+ Y+ + +RKLFD+
Sbjct: 83 DSLLCHYAATRSLNKTKILHGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVPLARKLFDD 142
Query: 51 MPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKL 110
+ + ++F WN II Y++ +G+ DAL++
Sbjct: 143 LSDPSLFLWNAIIKM-------------------------------YVD-KGFHFDALRV 170
Query: 111 FIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMY 170
F M + + D++T + C + + G +H + + ++ F +SL+ MY
Sbjct: 171 FDSMICSGK-CWPDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMY 229
Query: 171 SKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTL 230
C A +VF N++ K ++V SWNT+
Sbjct: 230 MNCGKVGLARQVF-------NVMLKRSVV--------------------------SWNTM 256
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL 290
ISG+ QNG EE L +F M + V + T SAL +C L+ ++ ++H V KN L
Sbjct: 257 ISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGHLKELELGIKVHKLVQKNHL 316
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
V + +VD+Y +C G M+EA F
Sbjct: 317 QEKIEVRNALVDMYSRC-------------------------------GGMDEASLVFAE 345
Query: 351 LTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHP 410
EK+V+ WT++ +GY+ N ++ L + +GVV +A+ L LL ACA L
Sbjct: 346 TKEKDVITWTSMINGYIMNGNAKSALALCPA-MQLDGVVPNAVTLASLLSACASLCCLKQ 404
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
GK +HA+++R + D +++ L+DMY+KC ++Y+ +F + V +N +++ H
Sbjct: 405 GKSLHAWVMRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTSMKRTVPWNALLSGLIH 464
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD 530
+ +A+ LF+ ML + ++ + TF +++ A+ ++ + + IS +
Sbjct: 465 NELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNLHSYLVRSGFIS-KIA 523
Query: 531 HYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFL 568
+ID+Y + L+ A + IP +E +I+ S L
Sbjct: 524 VITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVL 561
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 128/253 (50%), Gaps = 4/253 (1%)
Query: 329 SSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV-KAQNCEALFDLLSEFVTKEG 387
S + V Y+ G + AR+ FD L++ ++ +W A+ YV K + +AL + +
Sbjct: 121 SHLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDAL-RVFDSMICSGK 179
Query: 388 VVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAE 447
D +++ AC++ + L+ G IH L G + + ++L+ MY CG + A
Sbjct: 180 CWPDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLAR 239
Query: 448 IIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCG 507
+F ++R +V +N MI+ + +G E+A+ +F M++ ++PD+ T V+ L + H
Sbjct: 240 QVFNVMLKRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGHLK 299
Query: 508 SVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSF 567
+E+G K + + + + + ++D+Y R +++A + + E+D + S
Sbjct: 300 ELELGIK-VHKLVQKNHLQEKIEVRNALVDMYSRCGGMDEA-SLVFAETKEKDVITWTSM 357
Query: 568 LNVCRLNRNAELA 580
+N +N NA+ A
Sbjct: 358 INGYIMNGNAKSA 370
>gi|226529055|ref|NP_001142025.1| uncharacterized protein LOC100274179 [Zea mays]
gi|194706828|gb|ACF87498.1| unknown [Zea mays]
Length = 570
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 176/584 (30%), Positives = 283/584 (48%), Gaps = 38/584 (6%)
Query: 78 LFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVK 137
+FD D V YN++ Y N++ +AL+L M + +EFT+ + C +
Sbjct: 1 MFDGILDPDRVMYNTITRAYCNSD-CPREALRLHRCMLR--RGVLPNEFTLPFVVKACTR 57
Query: 138 LLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNA 197
+H +K F ++L+ Y+ ++ R F+
Sbjct: 58 AQAWDNALAVHGVALKLGFVGQVFVANALLHSYASAGSLGDSRRFFD------------- 104
Query: 198 MVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRW 257
EMA + + VSWN++I GY Q GD E LF M G
Sbjct: 105 -----------EMAGR---------NVVSWNSMIGGYAQAGDTREACALFGEMRRQGFLG 144
Query: 258 NEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESML 317
+E T AS L AC N++ + +H +L +G + + +VD+Y KC ++ A
Sbjct: 145 DEFTLASLLLACSQEGNLEFGRLVHCLMLVSGSPVDLILGGALVDMYSKCGDLCMARRCF 204
Query: 318 LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFD 377
+ +++ S +SM+ + G+++ AR FD + E+N V W + S YV+ D
Sbjct: 205 EMMPIKSVVSWTSMLCAQTKHGSVDAARCWFDHMPERNTVSWNTMISCYVQRGQYHEALD 264
Query: 378 LLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMY 437
L + + G D LV +L AC L GK +H YI D LI++L+DMY
Sbjct: 265 LYKQ-MQSHGPAPDEATLVPVLSACGRIGDLTVGKMVHLYIRDNIHNPDISLINSLLDMY 323
Query: 438 SKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFV 497
+KCG + A +F+ R++V +NV+I A HG AI F M+ + PD +TFV
Sbjct: 324 AKCGQVDTAIRLFREMCNRNVVSWNVIIGGLAMHGRALDAITFFRSMV-RNTSPDGITFV 382
Query: 498 AILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPT 557
A+LS+ H G +E G+ YF SM Y + E +HYACM+DL GR LEKA+ +K +P
Sbjct: 383 ALLSSCSHGGLLETGQHYFESMRHVYNVKHEVEHYACMVDLLGRRGHLEKAVCLIKEMPM 442
Query: 558 EEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRI 617
+ D V+ G+ L CR++ N ++ + ++LL LEG + +V ++N+ W +M R+
Sbjct: 443 KPDVVVWGALLGACRIHGNVKIGKQVIKQLLELEGISGGLFVLISNLLYETNQWEDMKRL 502
Query: 618 RKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
RK M+ + G S + + + IH F V D+ H ++ IY+V+
Sbjct: 503 RKLMKERGTRKDMGVSSIEINNSIHEFGVEDIRHESSSEIYAVV 546
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 141/521 (27%), Positives = 225/521 (43%), Gaps = 108/521 (20%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R+ AL H A+K G N L+H Y+ L +SR+ FDEM RNV SWN+
Sbjct: 57 RAQAWDNALAVHGVALKLGFVGQVFVANALLHSYASAGSLGDSRRFFDEMAGRNVVSWNS 116
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I ++ D ++A +LF G + +G+
Sbjct: 117 MIGGYAQAGDTREACALF----------------GEMRRQGFLG---------------- 144
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
DEFT+ S L C + N+ FGR +H M+ + + +L+DMYSKC A R
Sbjct: 145 --DEFTLASLLLACSQEGNLEFGRLVHCLMLVSGSPVDLILGGALVDMYSKCGDLCMARR 202
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
FE + +++S +M+ A + G ++ A F PE N VSWNT+IS YVQ G
Sbjct: 203 CFEMMPIK-SVVSWTSMLCAQTKHGSVDAARCWFDHMPERN-TVSWNTMISCYVQRGQYH 260
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVS--SG 299
E L L+ +M +G +E T LSAC + ++ K +H ++ N I NP +S +
Sbjct: 261 EALDLYKQMQSHGPAPDEATLVPVLSACGRIGDLTVGKMVHLYIRDN--IHNPDISLINS 318
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
++D+Y KC G ++ A R F + +NVV W
Sbjct: 319 LLDMYAKC-------------------------------GQVDTAIRLFREMCNRNVVSW 347
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTK-EGVVTDALILVILLGACALQAALHPGKEIHAYI 418
+ G A + AL D ++ F + D + V LL +C+ H +
Sbjct: 348 NVIIGGL--AMHGRAL-DAITFFRSMVRNTSPDGITFVALLSSCS-----------HGGL 393
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
L G + ++ +Y+ ++ ++ Y M+ GH EKA+
Sbjct: 394 LETG----QHYFESMRHVYN---------------VKHEVEHYACMVDLLGRRGHLEKAV 434
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSM 519
L +EM +KPD V + A+L A R G+V++G++ +
Sbjct: 435 CLIKEM---PMKPDVVVWGALLGACRIHGNVKIGKQVIKQL 472
>gi|108862877|gb|ABA99065.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 491
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 174/537 (32%), Positives = 269/537 (50%), Gaps = 75/537 (13%)
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
R D FT S L + V R +H+ +VK + F ++LID YSK + +A +
Sbjct: 3 RRDSFTY-SFLIKALSAAGVAPVRAVHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARK 61
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
VF+ E +++S N +AA REGE+ K F PE D VSWNT++ GY + G+ E
Sbjct: 62 VFDEMPER-DVVSWNTAMAAMVREGELAGVRKLFDEMPE-KDTVSWNTILDGYTKAGEVE 119
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
+LF RM E RNV SW S +V
Sbjct: 120 AAFELFQRMPE--------------------RNVV------SW-------------STMV 140
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
YCK ++ A + +N + + M+ + +G ++EA + F + E +V +
Sbjct: 141 SGYCKKGDLEMARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVEL--- 197
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
D +V +L ACA +L GK IH Y+ +
Sbjct: 198 -----------------------------DVAAVVSILAACAESGSLSLGKRIHRYVRKR 228
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQN-FIERDLVLYNVMIACYAHHGHEEKAILL 480
+ + + L+DM+ KCG + A+ +F +++D V +N +I +A HGH +KA+ L
Sbjct: 229 NLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALEL 288
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
F +M ++G PDAVT + +LSA H G V+ G ++F++M DY I P+ +HY CMIDL G
Sbjct: 289 FAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMIDLLG 348
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQ 600
R +++A++ +KS+P E + VI GS L+ CRL++N E A A +L +L+ +N Y
Sbjct: 349 RGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAV 408
Query: 601 LANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
L+N+YA G W++M + R QM+G + AG SWV + H FTVGD H ++ I
Sbjct: 409 LSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVELNETFHEFTVGDRKHQDSDQI 465
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 131/286 (45%), Gaps = 31/286 (10%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K G T N LI YSK+ ++RK+FDEMPER+V SWNT ++A ++ +L
Sbjct: 28 HSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGEL 87
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSA--------------- 117
R LFD P KD V++N++L GY A EA A +LF M
Sbjct: 88 AGVRKLFDEMPEKDTVSWNTILDGYTKAGEVEA-AFELFQRMPERNVVSWSTMVSGYCKK 146
Query: 118 ----------DEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLI 167
D+ + T T ++ C + V +L A M + S + AV S++
Sbjct: 147 GDLEMARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSIL 206
Query: 168 DMYSKCRCYEEACRVFEGCTEEVNLISK----NAMVAACCREGEMEMALKTFWRQPELND 223
++ R+ + NL NA++ C+ G + A F + D
Sbjct: 207 AACAESGSLSLGKRIHR-YVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKD 265
Query: 224 AVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
+VSWN++I G+ +G ++ L+LF +M + G + T + LSAC
Sbjct: 266 SVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSAC 311
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 178/604 (29%), Positives = 293/604 (48%), Gaps = 72/604 (11%)
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
D+K A +F ++ +++V +N ML + + +++ ++F +MQ + + ++FT S
Sbjct: 364 DIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNL-SESFRIFRQMQI--KGLIPNQFTYPS 420
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L C + + G Q+H ++KT + + S LIDMY+K
Sbjct: 421 ILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAK------------------ 462
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
G+++ A R +D VSW LISGY Q+ E LK F M
Sbjct: 463 --------------HGKLDTA-HVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEM 507
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
G++ + F+SA+SAC G++ + ++IH+ +G + + + +V +Y +C
Sbjct: 508 LNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARC--- 564
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
G ++EA F+ + K+ + W L SG+ ++
Sbjct: 565 ----------------------------GRIKEAYLEFEKIDAKDSISWNGLISGFAQSG 596
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVI--LLGACALQAALHPGKEIHAYILRMGVQMDKK 428
CE D L F +A + A A A + GK+IHA I++ G D +
Sbjct: 597 YCE---DALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIE 653
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
+ + L+ Y+KCG++ A F E++ V +N MI Y+ HG+ +A+ LFE+M + G
Sbjct: 654 VSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVG 713
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
P+ VTFV +LSA H G V G YF SM+ ++ + P+ HYAC++DL RA L +A
Sbjct: 714 EMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRA 773
Query: 549 IEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAE 608
+F++ +P E DA I + L+ C +++N E+ A + LL LE + A YV L+N+YA
Sbjct: 774 RKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNMYAVS 833
Query: 609 GNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
G W + R+ MR + G SW+ V++ +H F VGD HP + IY LA +
Sbjct: 834 GKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYVGDRLHPLADKIYEFLAELNKKA 893
Query: 669 YEIA 672
EI
Sbjct: 894 AEIG 897
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 135/547 (24%), Positives = 238/547 (43%), Gaps = 111/547 (20%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + I GL + I +N LI +Y+K+ L+ +RK+FD + ++ SW +IS
Sbjct: 135 HARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISG------- 187
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+ GYE +A+ LF EM +A I + +S L
Sbjct: 188 -------------------------FSQNGYEEEAIHLFCEMHTAG--IFPTPYVFSSVL 220
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C K+ G QLHA + K + + ++L+ +YS+ + A +VF
Sbjct: 221 SGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFS-------- 272
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+ + D VS+N+LISG Q G ++ L+LF +M
Sbjct: 273 -------------------------KMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKR 307
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+ ++ + T AS LSAC + +++HS+V+K G+ S+ V ++D+Y C ++
Sbjct: 308 DYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKT 367
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
A M L + +NVV+W + + K N
Sbjct: 368 AHEMFL-------------------------------TAQTENVVLWNVMLVAFGKLDNL 396
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
F + + K G++ + +L C AL G++IH +++ G Q + + S
Sbjct: 397 SESFRIFRQMQIK-GLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSV 455
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
L+DMY+K G + A +I + E D+V + +I+ YA H +A+ F+EML +GI+ D
Sbjct: 456 LIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSD 515
Query: 493 AVTFVAILSAFRHCGSVEMG-----EKYFNSMTADYKISPETDHYACMIDLYGRANQLEK 547
+ F + +SA ++ G + Y + + D I ++ LY R ++++
Sbjct: 516 NIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIG------NALVSLYARCGRIKE 569
Query: 548 A-IEFMK 553
A +EF K
Sbjct: 570 AYLEFEK 576
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 130/565 (23%), Positives = 246/565 (43%), Gaps = 106/565 (18%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
+ S +L E H + +K G ++ N+L+ +Y L K+F++MP R+V SW+
Sbjct: 21 LNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVRSWD 80
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
IIS ++ K + + D ++ M+ +E+
Sbjct: 81 KIISGFMEK---KMSNRVLD--------LFSCMI-----------------------EEN 106
Query: 121 IRMDEFTVTSTLNLCV-KLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
+ E + S L C + + + Q+HA ++ S + LI +Y+K A
Sbjct: 107 VSPTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISA 166
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
+VF+ NL +K D+VSW +ISG+ QNG
Sbjct: 167 RKVFD------NLCTK---------------------------DSVSWVAMISGFSQNGY 193
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
EE + LF M G+ + F+S LS C ++ +++H+ V K G +V +
Sbjct: 194 EEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNA 253
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
+V +Y + N AE + ++ S +S+I G + QG ++ + ++
Sbjct: 254 LVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQG-----------FSDGALELF 302
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
T + Y+K D + + LL ACA AL G+++H+Y++
Sbjct: 303 TKMKRDYLKP---------------------DCVTVASLLSACASNGALCKGEQLHSYVI 341
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
+ G+ D + L+D+Y C ++ A +F ++VL+NVM+ + + ++
Sbjct: 342 KAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFR 401
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC--MID 537
+F +M KG+ P+ T+ +IL G++++GE+ + K + + Y C +ID
Sbjct: 402 IFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVI---KTGFQFNVYVCSVLID 458
Query: 538 LYGRANQLEKAIEFMKSIPTEEDAV 562
+Y + +L+ A ++++ TE+D V
Sbjct: 459 MYAKHGKLDTAHVILRTL-TEDDVV 482
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 118/548 (21%), Positives = 225/548 (41%), Gaps = 100/548 (18%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H K G +L T N L+ +YS+ MP +
Sbjct: 236 HALVFKYGSSLETYVCNALVTLYSR-------------MP------------------NF 264
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
A +F KD V++NS++ G + +G+ AL+LF +M+ ++++ D TV S L
Sbjct: 265 VSAEKVFSKMQSKDEVSFNSLISG-LAQQGFSDGALELFTKMKR--DYLKPDCVTVASLL 321
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C + G QLH++++K + +L+D+Y C + A +F E
Sbjct: 322 SACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTE--- 378
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+ V WN ++ + + + E ++F +M
Sbjct: 379 ------------------------------NVVLWNVMLVAFGKLDNLSESFRIFRQMQI 408
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G+ N+ T+ S L C + + ++IH+ V+K G N +V S ++D+Y K ++
Sbjct: 409 KGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDT 468
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
A +L + S +++I GY+ EA +HF + +
Sbjct: 469 AHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNR------------------ 510
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
G+ +D + + ACA AL+ G++IHA G D + +
Sbjct: 511 --------------GIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNA 556
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
LV +Y++CG + A + F+ +D + +N +I+ +A G+ E A+ +F +M ++
Sbjct: 557 LVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEAS 616
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
TF + +SA + +++ G K ++M + + +I Y + +E A
Sbjct: 617 FFTFGSAVSAAANIANIKQG-KQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREF 675
Query: 553 KSIPTEED 560
+P + D
Sbjct: 676 CEMPEKND 683
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 141/339 (41%), Gaps = 79/339 (23%)
Query: 22 TLT---TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFS----WNTIISACIKSHDLKQ 74
TLT ++ LI Y++HNL E+ K F EM R + S +++ ISAC L Q
Sbjct: 475 TLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQ 534
Query: 75 ARSL-----------------------------------FDSSPHKDLVTYNSMLCGYIN 99
R + F+ KD +++N ++ G+
Sbjct: 535 GRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQ 594
Query: 100 AEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDAS 159
+ GY DALK+F +M A + FT S ++ + N+ G+Q+HA ++K D+
Sbjct: 595 S-GYCEDALKVFAQMNRAK--LEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSD 651
Query: 160 GFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQP 219
++LI Y+KC E+A R F P
Sbjct: 652 IEVSNALITFYAKCGSIEDARR--------------------------------EFCEMP 679
Query: 220 ELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNV-KCA 278
E ND VSWN +I+GY Q+G E + LF +M + G N TF LSAC + V K
Sbjct: 680 EKND-VSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGL 738
Query: 279 KEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESML 317
S ++GL+ P + +VD+ + ++ A +
Sbjct: 739 GYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFI 777
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 136/310 (43%), Gaps = 39/310 (12%)
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
M G+ N T+ L C ++ K++H +LK G + + + +VDVY
Sbjct: 1 MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVY----- 55
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
F++ G+++ + F+ + ++V W + SG+++
Sbjct: 56 ----------------FAL----------GDLDGVVKVFEDMPNRSVRSWDKIISGFMEK 89
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
+ + DL S + + T+ +L + + ++IHA I+ G+ +
Sbjct: 90 KMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPII 149
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+ L+ +Y+K G + A +F N +D V + MI+ ++ +G+EE+AI LF EM GI
Sbjct: 150 SNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGI 209
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC--MIDLYGRANQL-- 545
P F ++LS ++GE+ +++ Y S ET Y C ++ LY R
Sbjct: 210 FPTPYVFSSVLSGCTKIKLFDVGEQ-LHALVFKYGSSLET--YVCNALVTLYSRMPNFVS 266
Query: 546 -EKAIEFMKS 554
EK M+S
Sbjct: 267 AEKVFSKMQS 276
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 85/245 (34%), Gaps = 77/245 (31%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
N+K+ H IK G +N LI Y+K + ++R+ F EMPE+N SW
Sbjct: 632 NIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSW----- 686
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
N+M+ GY + GY +A+ LF +M+ E +
Sbjct: 687 --------------------------NAMITGY-SQHGYGNEAVNLFEKMKQVGE--MPN 717
Query: 125 EFTVTSTLNLC--VKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
T L+ C V L+ G G
Sbjct: 718 HVTFVGVLSACSHVGLVTKGLG-------------------------------------Y 740
Query: 183 FEGCTEEVNLISKNA----MVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
FE ++E L+ K A +V R G + A K P DA W TL+S +
Sbjct: 741 FESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHK 800
Query: 239 DAEEG 243
+ E G
Sbjct: 801 NVEVG 805
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 172/506 (33%), Positives = 281/506 (55%), Gaps = 30/506 (5%)
Query: 191 NLISKNAMVAACC-RE-GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
N I +N +++ CC RE G+M A + F PE + SWN + GY + + G+ L++
Sbjct: 45 NPIIQNKILSFCCSREFGDMCYARQLFDTIPEPS-VFSWNIMFKGYSRIACPKLGVSLYL 103
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
M E V+ + +T+ ++ +E+H V+K GL SN F + ++++Y C
Sbjct: 104 EMLERNVKPDCYTYPFLFKGFTRSVALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCG 163
Query: 309 NMNYAESML-------------LLKGV----RNSFSISSMIVGYSLQGNMEEARRHFDSL 351
++ A + ++ G ++ S ++++ G+ G ++ AR++F +
Sbjct: 164 LIDMARGIFDMSCKSDVVTWNAMISGYNRIKKDVISWTAIVTGFVNTGQVDAARKYFHKM 223
Query: 352 TEKNVVVWTALFSGYVKAQNC--EALFDLLSEFVTKEGVVTDALILVILLGACALQAALH 409
E++ V WTA+ GY++ NC EAL L E T + + D +V +L ACA AL
Sbjct: 224 PERDHVSWTAMIDGYLRL-NCYKEALM-LFREMQTSK-IKPDEFTMVSVLTACAQLGALE 280
Query: 410 PGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYA 469
G+ I YI + V+ D + + L+DMY KCGN+ A IF +RD + M+ A
Sbjct: 281 LGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLA 340
Query: 470 HHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPET 529
+G E+A+ +F +ML+ + PD VT+V +LSA H G V+ G+K+F SMTA + I P
Sbjct: 341 INGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNI 400
Query: 530 DHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLR 589
HY CM+DL G+A L++A E +K++P + ++++ G+ L CR++++AE+A A E++L
Sbjct: 401 AHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLGACRIHKDAEMAERAIEQILE 460
Query: 590 LEGNNKARYVQLANVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVG 647
LE NN A YV N+YAA W ++ +R+ M RG+K + GCS + + +H F G
Sbjct: 461 LEPNNGAVYVLQCNIYAACNKWDKLRELRQVMMDRGIK--KTPGCSLIEMNGIVHEFVAG 518
Query: 648 DVSHPKTNAIYSVLAIFTGELYEIAG 673
D SHP+T IY L T +L +IAG
Sbjct: 519 DQSHPQTKEIYGKLNKMTSDL-KIAG 543
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 206/447 (46%), Gaps = 56/447 (12%)
Query: 60 NTIISACIKSH--DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSA 117
N I+S C D+ AR LFD+ P + ++N M GY + + L++EM
Sbjct: 50 NKILSFCCSREFGDMCYARQLFDTIPEPSVFSWNIMFKGYSRIACPKL-GVSLYLEM--L 106
Query: 118 DEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYE 177
+ +++ D +T + + + GR+LH +VK D++ FA ++LI+MYS C +
Sbjct: 107 ERNVKPDCYTYPFLFKGFTRSVALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLID 166
Query: 178 EACRVFE-GCTEEV---------------NLISKNAMVAACCREGEMEMALKTFWRQPEL 221
A +F+ C +V ++IS A+V G+++ A K F + PE
Sbjct: 167 MARGIFDMSCKSDVVTWNAMISGYNRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPE- 225
Query: 222 NDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEI 281
D VSW +I GY++ +E L LF M + ++ +E T S L+AC L ++ + I
Sbjct: 226 RDHVSWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWI 285
Query: 282 HSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNM 341
+++ KN + ++ FV + ++D+Y KC N+ A S+ R+ F+ ++M+VG ++ G
Sbjct: 286 RTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCG 345
Query: 342 EEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGA 401
EEA F + K V D + V +L A
Sbjct: 346 EEALNMFSQM--------------------------------LKASVTPDEVTYVGVLSA 373
Query: 402 CALQAALHPGKEIHAYIL-RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLV 459
C + GK+ A + R G++ + +VD+ K G++ A I +N ++ + +
Sbjct: 374 CTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSI 433
Query: 460 LYNVMIACYAHHGHEEKAILLFEEMLE 486
++ ++ H E A E++LE
Sbjct: 434 VWGALLGACRIHKDAEMAERAIEQILE 460
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 160/370 (43%), Gaps = 57/370 (15%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFD------------- 49
+L L L CHV +K GL N LI++YS L+ +R +FD
Sbjct: 129 ALQLGRELHCHV--VKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAM 186
Query: 50 ----EMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEA 105
+++V SW I++ + + + AR F P +D V++ +M+ GY+ Y+
Sbjct: 187 ISGYNRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYK- 245
Query: 106 DALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS 165
+AL LF EMQ++ I+ DEFT+ S L C +L + G + ++ K F ++
Sbjct: 246 EALMLFREMQTSK--IKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNA 303
Query: 166 LIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAV 225
LIDMY KC G +EMAL F P+ D
Sbjct: 304 LIDMYFKC--------------------------------GNVEMALSIFNTLPQ-RDKF 330
Query: 226 SWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIH-SW 284
+W ++ G NG EE L +F +M + V +E T+ LSAC V K+ S
Sbjct: 331 TWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTHTGMVDEGKKFFASM 390
Query: 285 VLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR-NSFSISSMIVGYSLQGNMEE 343
++G+ N +VD+ K ++ A ++ ++ NS +++ + + E
Sbjct: 391 TARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLGACRIHKDAEM 450
Query: 344 ARRHFDSLTE 353
A R + + E
Sbjct: 451 AERAIEQILE 460
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 126/298 (42%), Gaps = 60/298 (20%)
Query: 279 KEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQ 338
K+IHS +K G+I NP + + I+ C E
Sbjct: 31 KQIHSRTIKTGIICNPIIQNKILSFCCSRE-----------------------------F 61
Query: 339 GNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVIL 398
G+M AR+ FD++ E +V W +F GY + C L L + + V D L
Sbjct: 62 GDMCYARQLFDTIPEPSVFSWNIMFKGYSRIA-CPKLGVSLYLEMLERNVKPDCYTYPFL 120
Query: 399 LGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDL 458
AL G+E+H ++++ G+ + + L++MYS CG + A IF + D+
Sbjct: 121 FKGFTRSVALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDV 180
Query: 459 VLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNS 518
V +N MI+ Y IK D +++ AI++ F + G V+ KYF+
Sbjct: 181 VTWNAMISGYNR------------------IKKDVISWTAIVTGFVNTGQVDAARKYFHK 222
Query: 519 MTADYKISPETDH--YACMIDLYGRANQLEKAIEFMKSIPT---EEDAVILGSFLNVC 571
M PE DH + MID Y R N ++A+ + + T + D + S L C
Sbjct: 223 M-------PERDHVSWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLTAC 273
>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
Length = 796
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 182/654 (27%), Positives = 307/654 (46%), Gaps = 106/654 (16%)
Query: 20 GLTLTTITTNQLIHIYSKHNLLRESRKLFDEMP-ERNVFSWNTIISACIKSHDLKQARSL 78
GL L I N L+ +Y+K L ++++LF+ M R+V SWN
Sbjct: 152 GLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWN------------------ 193
Query: 79 FDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKL 138
+M+ Y + +E +A++L+ +M + +R T TS L+ C L
Sbjct: 194 -------------AMIAAYAQSGHFE-EAIRLYEDMD-VEPSVR----TFTSVLSACSNL 234
Query: 139 LNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAM 198
+ GR++HA + + ++L+ MY++C+C ++A ++
Sbjct: 235 GLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKI---------------- 278
Query: 199 VAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWN 258
F R P D VSW+ +I+ + + +E ++ + +M GVR N
Sbjct: 279 ----------------FQRLPR-RDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPN 321
Query: 259 EHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLL 318
+TFAS L AC + +++ + +H +L NG + +VD+Y
Sbjct: 322 YYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTS------------ 369
Query: 319 LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDL 378
G+++EAR FD + ++ +WT L GY K + + +L
Sbjct: 370 -------------------YGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLEL 410
Query: 379 LSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYS 438
E V +I ++ ACA A ++ H+ I G+ D L ++LV+MYS
Sbjct: 411 YREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYS 470
Query: 439 KCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVA 498
+ GN+ A +F RD + + +IA YA HG A+ L++EM +G +P +TF+
Sbjct: 471 RWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMV 530
Query: 499 ILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE 558
+L A H G E G++ F S+ +DY + P HY+C+IDL RA +L A E + ++P E
Sbjct: 531 VLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVE 590
Query: 559 EDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIR 618
+ V S L R++++ + A A ++ +L+ + A YV L+NV+A GN A M +R
Sbjct: 591 PNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVR 650
Query: 619 KQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYE 670
M RG+K R G SW+ V +IH F VGD SHP+ I++ L + ++ E
Sbjct: 651 NTMVARGVKKRR--GSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKE 702
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 144/293 (49%), Gaps = 15/293 (5%)
Query: 273 RNVKCAKEIHSWVLKNGLISNPFVSSG-IVDVYCKCENMNYAESM---LLLKGVRNSFSI 328
R++ AK + + LK + F SSG D +C+++ + + N F
Sbjct: 3 RSLAPAK-VRRFQLKEEKAGSRFDSSGHYRDALRQCQDLESVRQIHDRISGAASANVFLG 61
Query: 329 SSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGV 388
+ ++ Y G++ AR FD++ KN W ++ + Y + + A DL +
Sbjct: 62 NEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRM----DL 117
Query: 389 VTDALILVILLGACALQAALHPGKEIHAYIL-RMGVQMDKKLISTLVDMYSKCGNMTYAE 447
+ ++ +LGACA AL GK IH+ I G+++D L ++L+ MY+KCG++ A+
Sbjct: 118 QPNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAK 177
Query: 448 IIFQNFI-ERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHC 506
+F+ R + +N MIA YA GH E+AI L+E+M ++P TF ++LSA +
Sbjct: 178 RLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNL 234
Query: 507 GSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE 559
G ++ G K +++ + + ++ +Y R L+ A + + +P +
Sbjct: 235 GLLDQGRK-IHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRD 286
>gi|413918395|gb|AFW58327.1| hypothetical protein ZEAMMB73_709604 [Zea mays]
Length = 906
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 195/676 (28%), Positives = 319/676 (47%), Gaps = 60/676 (8%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACI 67
EAL Q I G T ++ + S R K R+ + +S +
Sbjct: 262 EALALFSQMISQGYLPNYSTVASILPVCSFTEFGRHHGKEVHSFVVRHGMEIDVSVSNAL 321
Query: 68 KSH-----DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
+H ++K S+F S +D+V++N+++ GY+ GY AL LF + S I
Sbjct: 322 MTHYSKVLEMKDVESIFTSMDVRDIVSWNTIIAGYV-MNGYHHRALGLFQGLLSTG--IA 378
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
D + S L C ++ +V G ++H ++ + +++L+ YS C +++A R
Sbjct: 379 PDSVSFISLLTACAQVGDVKTGMEVHGYIFQRPVLQETSLMNALVTFYSHCDRFDDAFRA 438
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
F T+ +N D++SWN ++S + E
Sbjct: 439 F---TDILN------------------------------KDSISWNAILSACATSEQHIE 465
Query: 243 GLKLFVRMGE-----NGVRWNEHTFASA--LSACCGLRNVKCAKEIHSWVLKNGLISNPF 295
K FV M E N +W+ T + +S CG++ V+ E H W L+ G
Sbjct: 466 --KFFVLMSEMCRGVNQCQWDSVTVLNVIHMSTFCGIKMVR---EAHGWSLRVGYTGETS 520
Query: 296 VSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKN 355
V++ I+D Y KC + A + RN + + MI Y +E+A F+ + EK+
Sbjct: 521 VANAILDAYVKCGYSHDASILFRNHAGRNIVTDNIMISCYLKSNCIEDAEVIFNHMAEKD 580
Query: 356 VVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIH 415
+ W + Y + F L + + EG+ D + + +L AC ++ ++ H
Sbjct: 581 LTSWNLMIQLYAQNDMDGQAFSLFNH-LQSEGLKPDIVSIANILEACIHLCSVQLVRQCH 639
Query: 416 AYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEE 475
AY+LR ++ D L LVD YSKCGN+T A IFQ ++DLV + MI CYA HG E
Sbjct: 640 AYMLRASLE-DIHLEGALVDAYSKCGNITNAYNIFQISPKKDLVTFTAMIGCYAMHGMAE 698
Query: 476 KAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACM 535
+A+ LF +ML+ I+PD V +LSA H G V+ G K F S+ +++ P +HYACM
Sbjct: 699 EAVELFSKMLKLDIRPDHVVLTTLLSACSHAGLVDAGIKIFKSIREIHRVVPTAEHYACM 758
Query: 536 IDLYGRANQLEKAIEFMKSIPTEE-DAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNN 594
+DL R+ ++ A F +P +A S L C+++ E+ A +L +EG +
Sbjct: 759 VDLLARSGHIQDAYMFALDMPPHAVNANAWSSLLGACKVHGKVEIGQLAAGRLFSMEGGD 818
Query: 595 KARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKT 654
YV ++N+YAA+ W + +RK M+ + + AGCSW+ VE H+F D++H
Sbjct: 819 IGNYVIMSNIYAADEKWDGVENVRKLMKSIDMKKPAGCSWIEVEKTRHLFIASDINHQDR 878
Query: 655 NAIYSVLAIFTGELYE 670
+ IY +L G LY+
Sbjct: 879 SCIYDML----GSLYQ 890
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 186/400 (46%), Gaps = 41/400 (10%)
Query: 181 RVFEGCTEEVNLISKNAMVA-----ACCREGEMEMALKTFWRQPELNDAVSWNTLISGYV 235
R G + ++ +A VA A R G + AL F + DAV WN LI+
Sbjct: 90 RCLHGLAVKAGRVASSATVAKAVMDAYGRFGSLADALLLF-DEMARPDAVCWNILITACS 148
Query: 236 QNGDAEEGLKLFVRMGENGVRWNEHT---FASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
+ G E+ LF M GV T A + AC R+++ + +H +V+K GL S
Sbjct: 149 RRGLFEDAFILFRSMLSCGVGQGMPTAVTVAVIVPACAKWRHLQTGRSVHCYVVKTGLES 208
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
+ + +V +Y KC G R M +A R F S+
Sbjct: 209 DTLCGNALVSMYAKC------------GGSRV----------------MVDAHRAFSSIR 240
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACAL-QAALHPG 411
K+VV W ++ +GY++ Q L S+ ++ +G + + + +L C+ + H G
Sbjct: 241 CKDVVSWNSVIAGYIENQLFGEALALFSQMIS-QGYLPNYSTVASILPVCSFTEFGRHHG 299
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
KE+H++++R G+++D + + L+ YSK M E IF + RD+V +N +IA Y +
Sbjct: 300 KEVHSFVVRHGMEIDVSVSNALMTHYSKVLEMKDVESIFTSMDVRDIVSWNTIIAGYVMN 359
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH 531
G+ +A+ LF+ +L GI PD+V+F+++L+A G V+ G + + + ET
Sbjct: 360 GYHHRALGLFQGLLSTGIAPDSVSFISLLTACAQVGDVKTGME-VHGYIFQRPVLQETSL 418
Query: 532 YACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVC 571
++ Y ++ + A I +D++ + L+ C
Sbjct: 419 MNALVTFYSHCDRFDDAFRAFTDI-LNKDSISWNAILSAC 457
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 141/537 (26%), Positives = 226/537 (42%), Gaps = 110/537 (20%)
Query: 13 HVQAIKAGLTLTTITTNQ-LIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHD 71
H A+KAG ++ T + ++ Y + L ++ LFDEM + WN +I+AC +
Sbjct: 93 HGLAVKAGRVASSATVAKAVMDAYGRFGSLADALLLFDEMARPDAVCWNILITACSR--- 149
Query: 72 LKQARSLFDSSPHKDLVTYNSML-CGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
R LF+ + + + SML CG +G M +A TV
Sbjct: 150 ----RGLFEDA----FILFRSMLSCGV--GQG-----------MPTA--------VTVAV 180
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKC---RCYEEACRVFEGCT 187
+ C K ++ GR +H ++VKT ++ ++L+ MY+KC R +A R F
Sbjct: 181 IVPACAKWRHLQTGRSVHCYVVKTGLESDTLCGNALVSMYAKCGGSRVMVDAHRAFSSIR 240
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
C+ D VSWN++I+GY++N E L LF
Sbjct: 241 ---------------CK------------------DVVSWNSVIAGYIENQLFGEALALF 267
Query: 248 VRMGENGVRWNEHTFASALSACCGLR-NVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
+M G N T AS L C KE+HS+V+++G+ + VS+ ++ Y K
Sbjct: 268 SQMISQGYLPNYSTVASILPVCSFTEFGRHHGKEVHSFVVRHGMEIDVSVSNALMTHYSK 327
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
M ES+ VR+ S +++I GY + G A LF G
Sbjct: 328 VLEMKDVESIFTSMDVRDIVSWNTIIAGYVMNGYHHRA---------------LGLFQG- 371
Query: 367 VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMD 426
LLS G+ D++ + LL ACA + G E+H YI + V +
Sbjct: 372 -----------LLS-----TGIAPDSVSFISLLTACAQVGDVKTGMEVHGYIFQRPVLQE 415
Query: 427 KKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMI-ACYAHHGHEEKAILLFEEML 485
L++ LV YS C A F + + +D + +N ++ AC H EK +L EM
Sbjct: 416 TSLMNALVTFYSHCDRFDDAFRAFTDILNKDSISWNAILSACATSEQHIEKFFVLMSEMC 475
Query: 486 EKGIKP---DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
+G+ D+VT + ++ CG + E + S+ Y + ET ++D Y
Sbjct: 476 -RGVNQCQWDSVTVLNVIHMSTFCGIKMVREAHGWSLRVGY--TGETSVANAILDAY 529
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 144/626 (23%), Positives = 251/626 (40%), Gaps = 139/626 (22%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R L ++ C+V +K GL T+ N L+ +Y+K
Sbjct: 189 RHLQTGRSVHCYV--VKTGLESDTLCGNALVSMYAK------------------------ 222
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
C S + A F S KD+V++NS++ GYI + + +AL LF +M S +
Sbjct: 223 ----CGGSRVMVDAHRAFSSIRCKDVVSWNSVIAGYIENQLF-GEALALFSQMIS--QGY 275
Query: 122 RMDEFTVTSTLNLCVKLLNVG--FGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
+ TV S L +C G G+++H+F+V+ + ++L+ YSK
Sbjct: 276 LPNYSTVASILPVC-SFTEFGRHHGKEVHSFVVRHGMEIDVSVSNALMTHYSKV------ 328
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMA-LKTFWRQPELNDAVSWNTLISGYVQNG 238
+EM +++ + ++ D VSWNT+I+GYV NG
Sbjct: 329 ----------------------------LEMKDVESIFTSMDVRDIVSWNTIIAGYVMNG 360
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
L LF + G+ + +F S L+AC + +VK E+H ++ + ++ + +
Sbjct: 361 YHHRALGLFQGLLSTGIAPDSVSFISLLTACAQVGDVKTGMEVHGYIFQRPVLQETSLMN 420
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
+V Y C+ ++A R F + K+ +
Sbjct: 421 ALVTFYSHCD-------------------------------RFDDAFRAFTDILNKDSIS 449
Query: 359 WTALFSGYVKA-QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
W A+ S + Q+ E F L+SE + V+ + + + +E H +
Sbjct: 450 WNAILSACATSEQHIEKFFVLMSEMCRGVNQCQWDSVTVLNVIHMSTFCGIKMVREAHGW 509
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
LR+G + + + ++D Y KCG A I+F+N R++V N+MI+CY E A
Sbjct: 510 SLRVGYTGETSVANAILDAYVKCGYSHDASILFRNHAGRNIVTDNIMISCYLKSNCIEDA 569
Query: 478 ILLFEEMLEK-------------------------------GIKPDAVTFVAILSAFRHC 506
++F M EK G+KPD V+ IL A H
Sbjct: 570 EVIFNHMAEKDLTSWNLMIQLYAQNDMDGQAFSLFNHLQSEGLKPDIVSIANILEACIHL 629
Query: 507 GSVEMGEKYFNSMTADYKISPETDHY-ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILG 565
SV++ + M + S E H ++D Y + + A + P ++D V
Sbjct: 630 CSVQLVRQCHAYM---LRASLEDIHLEGALVDAYSKCGNITNAYNIFQISP-KKDLVTFT 685
Query: 566 SFLNVCRLNRNAELAGEAEEKLLRLE 591
+ + ++ AE A E K+L+L+
Sbjct: 686 AMIGCYAMHGMAEEAVELFSKMLKLD 711
>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 190/607 (31%), Positives = 305/607 (50%), Gaps = 74/607 (12%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N +++ K + + ARS+F P KD V++NS++ G + E +E +A+ F M+
Sbjct: 394 NALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFE-EAVACFHTMRR--N 450
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
+ +F+V STL+ C L + G+Q+H +K D ++L+ +Y++ C EE
Sbjct: 451 GMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEY 510
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
+VF + PE D VSWN+ I G + +
Sbjct: 511 QKVF--------------------------------FLMPEY-DQVSWNSFI-GALATSE 536
Query: 240 AE--EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVS 297
A + +K F+ M + G + N TF + LSA L ++ ++IH+ +LK+ + + +
Sbjct: 537 ASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNAIE 596
Query: 298 SGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK-NV 356
+ ++ Y KCE M E + F ++E+ +
Sbjct: 597 NTLLAFYGKCEQMEDCEII-------------------------------FSRMSERRDE 625
Query: 357 VVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHA 416
V W A+ SGY+ L+ + ++G D L +L ACA A L G E+HA
Sbjct: 626 VSWNAMISGYIHNGILHKAMGLV-WLMMQKGQRLDDFTLATVLSACASVATLERGMEVHA 684
Query: 417 YILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
+R ++ + + S LVDMY+KCG + YA F+ R++ +N MI+ YA HGH K
Sbjct: 685 CAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGK 744
Query: 477 AILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMI 536
A+ LF +M + G PD VTFV +LSA H G V+ G ++F SM Y+++P +H++CM+
Sbjct: 745 ALKLFTQMKQHGQLPDHVTFVGVLSACSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCMV 804
Query: 537 DLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNV-CRLN-RNAELAGEAEEKLLRLEGNN 594
DL GRA ++K EF+K++P +A+I + L CR N RN EL A + L+ LE N
Sbjct: 805 DLLGRAGDVKKLEEFIKTMPMNPNALIWRTILGACCRANSRNTELGRRAAKMLIELEPLN 864
Query: 595 KARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKT 654
YV L+N++AA G W ++ R MR + + AGCSWV ++ +H+F GD +HP+
Sbjct: 865 AVNYVLLSNMHAAGGKWEDVEEARLAMRNAEVKKEAGCSWVTMKDGVHVFVAGDQTHPEK 924
Query: 655 NAIYSVL 661
IY L
Sbjct: 925 EKIYDKL 931
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 128/527 (24%), Positives = 224/527 (42%), Gaps = 116/527 (22%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTI 62
S +++A H+Q K GLT N L++I+ + L ++KLFDEMP++N+ SW+ +
Sbjct: 52 SCTVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCL 111
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
+S GY G +A LF + SA +
Sbjct: 112 VS-------------------------------GYAQ-NGMPDEACMLFRGIISAG--LL 137
Query: 123 MDEFTVTSTLNLCVKLLN--VGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRC-YEEA 179
+ + + S L C +L + G ++H + K+ + + L+ MYS C ++A
Sbjct: 138 PNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDA 197
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
RVFE E+ +KT + SWN++IS Y + GD
Sbjct: 198 RRVFE------------------------EIKMKT---------SASWNSIISVYCRRGD 224
Query: 240 AEEGLKLFVRM----GENGVRWNEHTFASALSACCGLRNVKCA----KEIHSWVLKNGLI 291
A KLF M E R NE+TF S ++ C L V C +++ + + K+ +
Sbjct: 225 AISAFKLFSSMQREATELNCRPNEYTFCSLVTVACSL--VDCGLTLLEQMLARIEKSSFV 282
Query: 292 SNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHF--- 348
+ +V S +V + + ++ A+ + RN+ +++ ++VG + Q EEA + F
Sbjct: 283 KDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEM 342
Query: 349 DSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAAL 408
L E N + L S + + N L+
Sbjct: 343 KDLVEINASSYAVLLSAFTEFSN--------------------------------LKEGK 370
Query: 409 HPGKEIHAYILRMGVQMDKKLI-STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIAC 467
G+E+HAY++R + LI + LV++Y+KC + A IFQ +D V +N +I+
Sbjct: 371 RKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISG 430
Query: 468 YAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
H+ E+A+ F M G+ P + ++ LS+ G + +G++
Sbjct: 431 LDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQ 477
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 141/636 (22%), Positives = 256/636 (40%), Gaps = 152/636 (23%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNL-LRESRKLFDEMPERNVFSWNTIIS 64
LK + H K+ + +N L+ +YS + + ++R++F+E+ + SWN+IIS
Sbjct: 158 LKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIIS 217
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
+ D A LF S ++ ++ + + R +
Sbjct: 218 VYCRRGDAISAFKLFSS------------------------------MQREATELNCRPN 247
Query: 125 EFTVTSTLNLCVKLLNVGFG--RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
E+T S + + L++ G Q+ A + K+S + S+L+ +++ + A +
Sbjct: 248 EYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMI 307
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
FE Q + +AV+ N L+ G + EE
Sbjct: 308 FE---------------------------------QMDDRNAVTMNGLMVGLARQHQGEE 334
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAK----EIHSWVLKNGLISN-PFVS 297
K+F M ++ V N ++A LSA N+K K E+H+++++N L+ +
Sbjct: 335 AAKIFKEM-KDLVEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIG 393
Query: 298 SGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVV 357
+ +V++Y KC ++ A S+ L +++ S +S+I G EEA F ++ +V
Sbjct: 394 NALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMV 453
Query: 358 VWTALFSGYVKAQNCEAL-FDLLSEFVTKEGV---------VTDALILVI---------- 397
+ FS +C +L + +L + + EG+ V++AL+ +
Sbjct: 454 --PSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQ 511
Query: 398 ----------------LLGACA----------------LQAALHPGK------------- 412
+GA A +QA P +
Sbjct: 512 KVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSL 571
Query: 413 -------EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIE-RDLVLYNVM 464
+IHA IL+ V D + +TL+ Y KC M EIIF E RD V +N M
Sbjct: 572 SLLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAM 631
Query: 465 IACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYK 524
I+ Y H+G KA+ L M++KG + D T +LSA C SV E+ +
Sbjct: 632 ISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSA---CASVATLERGMEVHACAIR 688
Query: 525 ISPETDHY--ACMIDLYGRANQLEKAIEFMKSIPTE 558
E + + ++D+Y + +++ A F + +P
Sbjct: 689 ACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPVR 724
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 167/376 (44%), Gaps = 45/376 (11%)
Query: 196 NAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGV 255
N +V R G + A K F P+ N VSW+ L+SGY QNG +E LF + G+
Sbjct: 78 NTLVNIFVRAGNLVSAQKLFDEMPQKN-LVSWSCLVSGYAQNGMPDEACMLFRGIISAGL 136
Query: 256 RWNEHTFASALSAC--CGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA 313
N + SAL AC G +K EIH + K+ S+ +S+ ++ +Y C
Sbjct: 137 LPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHC------ 190
Query: 314 ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE 373
++++ARR F+ + K W ++ S Y + +
Sbjct: 191 ------------------------SASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAI 226
Query: 374 ALFDLLSEFVTKEGV-----VTDALILVILLGACAL-QAALHPGKEIHAYILRMGVQMDK 427
+ F L S + +E + ++ AC+L L +++ A I + D
Sbjct: 227 SAFKLFSS-MQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDL 285
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
+ S LV +++ G + A++IF+ +R+ V N ++ A E+A +F+EM +
Sbjct: 286 YVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEM-KD 344
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA----CMIDLYGRAN 543
++ +A ++ +LSAF +++ G++ + A + D + +++LY + N
Sbjct: 345 LVEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCN 404
Query: 544 QLEKAIEFMKSIPTEE 559
++ A + +P+++
Sbjct: 405 AIDNARSIFQLMPSKD 420
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 143/355 (40%), Gaps = 51/355 (14%)
Query: 275 VKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVG 334
V+ A ++H + K GL S+ F + +V+++ +
Sbjct: 55 VEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRA--------------------------- 87
Query: 335 YSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFD---LLSEFVTKEGVVTD 391
GN+ A++ FD + +KN+V W+ L SGY AQN + D +L + G++ +
Sbjct: 88 ----GNLVSAQKLFDEMPQKNLVSWSCLVSGY--AQN--GMPDEACMLFRGIISAGLLPN 139
Query: 392 ALILVILLGACALQAA--LHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC-GNMTYAEI 448
+ L AC L G EIH I + D L + L+ MYS C ++ A
Sbjct: 140 HYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARR 199
Query: 449 IFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM----LEKGIKPDAVTFVAILSAFR 504
+F+ + +N +I+ Y G A LF M E +P+ TF ++++
Sbjct: 200 VFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVTV-- 257
Query: 505 HCGSVEMGEKYFNSMTADY-KISPETDHY--ACMIDLYGRANQLEKAIEFMKSIPTEEDA 561
C V+ G M A K S D Y + ++ + R ++ A + +
Sbjct: 258 ACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAV 317
Query: 562 VILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGR 616
+ G + + R ++ E A + +++ L N + Y L + + N E R
Sbjct: 318 TMNGLMVGLARQHQGEE-AAKIFKEMKDLVEINASSYAVLLSAFTEFSNLKEGKR 371
>gi|297740651|emb|CBI30833.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 173/620 (27%), Positives = 304/620 (49%), Gaps = 78/620 (12%)
Query: 58 SWNTIISACIKSHDLKQARSLFDSSPHK-DLVTYNSMLCGYINAEGYEADALKLFIEMQS 116
S ++I+ K + + A S+F H+ ++ +N+++ G+I G+ + + + +M+
Sbjct: 74 SITSLINMYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFIT-NGFPEEGFEFYQKMR- 131
Query: 117 ADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCY 176
+E + D+FT + C+ +L + +++H + K + F S+L++ Y K
Sbjct: 132 -NEGVIPDKFTFPCAIKACLDVLEI---KKIHGLLFKFGLELDVFIGSALVNCYLKF--- 184
Query: 177 EEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQ 236
G ME A F P + D V WN +++GY Q
Sbjct: 185 -----------------------------GLMEHAQVAFEELP-IRDVVLWNAMVNGYAQ 214
Query: 237 NGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFV 296
G E L+ F RM + V + T LS + ++ + IH + +K G S V
Sbjct: 215 IGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAV 274
Query: 297 SSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNV 356
S+ ++D+Y KC+ + E+A F+ + EK++
Sbjct: 275 SNSLIDMYGKCKCI-------------------------------EDALEIFEMMREKDI 303
Query: 357 VVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHA 416
W ++ S + + + + LL + G+ D + + +L AC+ AAL G+EIH
Sbjct: 304 FSWNSIVSVHEQCGDHDGTLRLLDRMLGA-GIQPDLVTVTTVLPACSHLAALMHGREIHG 362
Query: 417 YILRMGVQMDKK------LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
Y++ G+ D K L + ++DMY+KCG+M A ++F+ +D+ +N+MI Y
Sbjct: 363 YMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGM 422
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD 530
HG+ +A+ +F M E +KPD VTFV +LSA H G V G + M + Y ++P +
Sbjct: 423 HGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIE 482
Query: 531 HYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRL 590
HY C+ID+ GRA QL++A E ++P E + V+ + L CRL+++A LA A +++ L
Sbjct: 483 HYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFEL 542
Query: 591 EGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVS 650
E + YV ++NVY A G + E+ +R MR + GCSW+ +++ +H+F D +
Sbjct: 543 EPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRA 602
Query: 651 HPKTNAIYSVLAIFTGELYE 670
HP+ ++IY+ L T L E
Sbjct: 603 HPEAHSIYAGLNSLTARLRE 622
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 191/452 (42%), Gaps = 81/452 (17%)
Query: 109 KLFIEMQSADEHIRMDEFTVTSTLNLCVKLL-------NVGFGRQLHAFMVKTSNDASGF 161
LF S I+ F L C+ L N+ G+++H++M+ S
Sbjct: 16 PLFFNFSSISTAIQ--SFQQPYNLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPL 73
Query: 162 AVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPEL 221
+++SLI+MYSKC A +F T E+N+ +
Sbjct: 74 SITSLINMYSKCNQMNFALSIFSDPTHEINVFA--------------------------- 106
Query: 222 NDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEI 281
+N +ISG++ NG EEG + + +M GV ++ TF A+ AC + + K+I
Sbjct: 107 -----FNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEI---KKI 158
Query: 282 HSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNM 341
H + K GL + F+ S +V+ Y K G M
Sbjct: 159 HGLLFKFGLELDVFIGSALVNCYLKF-------------------------------GLM 187
Query: 342 EEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGA 401
E A+ F+ L ++VV+W A+ +GY + E + + + E VV + +L
Sbjct: 188 EHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRR-MNDESVVPSRFTVTGVLSV 246
Query: 402 CALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLY 461
A+ L+ G+ IH + ++MG + ++L+DMY KC + A IF+ E+D+ +
Sbjct: 247 FAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSW 306
Query: 462 NVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTA 521
N +++ + G + + L + ML GI+PD VT +L A H ++ G + M
Sbjct: 307 NSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIV 366
Query: 522 -----DYKISPETDHYACMIDLYGRANQLEKA 548
D K + +ID+Y + + A
Sbjct: 367 SGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDA 398
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 120/477 (25%), Positives = 207/477 (43%), Gaps = 104/477 (21%)
Query: 47 LFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEAD 106
LF E +VF + +++ +K ++ A+ F+ P +D+V +N+M+ GY +E
Sbjct: 162 LFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEM- 220
Query: 107 ALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVS-S 165
L+ F M DE + FTVT L++ + ++ GR +H F +K D SG AVS S
Sbjct: 221 VLETFRRMN--DESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYD-SGVAVSNS 277
Query: 166 LIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAV 225
LIDMY KC+C E+A +FE E+ D
Sbjct: 278 LIDMYGKCKCIEDALEIFEMMREK---------------------------------DIF 304
Query: 226 SWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWV 285
SWN+++S + Q GD + L+L RM G++ + T + L AC L + +EIH ++
Sbjct: 305 SWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYM 364
Query: 286 LKNGL------ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQG 339
+ +GL I + + + ++D+Y KC G
Sbjct: 365 IVSGLGKDGKDIDDVLLKNAVIDMYAKC-------------------------------G 393
Query: 340 NMEEARRHFDSLTEKNVVVWTALFSGY-VKAQNCEAL--FDLLSEFVTKEGVVTDALILV 396
+M +A F+ ++ K+V W + GY + EAL F + E K D + V
Sbjct: 394 SMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLK----PDEVTFV 449
Query: 397 ILLGACALQAALHPGKEIHAYILRMGVQMDKKLI----STLVDMYSKCGNMTYA-EIIFQ 451
+L AC+ + G+ ++++M + D + ++DM + G + A E+
Sbjct: 450 GVLSACSHAGFVSQGRN---FLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALT 506
Query: 452 NFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGS 508
IE + V++ ++A H H A + + + E ++P+ HCGS
Sbjct: 507 MPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFE--LEPE------------HCGS 549
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 114/271 (42%), Gaps = 73/271 (26%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L I H A+K G +N LI +Y K + ++ ++F+ M E+++FSWN+I+S
Sbjct: 252 DLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVS 311
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
H+ CG + +G L+L M A I+ D
Sbjct: 312 V------------------HEQ--------CG--DHDG----TLRLLDRMLGAG--IQPD 337
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV------SSLIDMYSKCRCYEE 178
TVT+ L C L + GR++H +M+ + G + +++IDMY+KC +
Sbjct: 338 LVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRD 397
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
A VFE + + D SWN +I GY +G
Sbjct: 398 AHLVFERMSNK---------------------------------DVASWNIMIMGYGMHG 424
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
E L++F RM E ++ +E TF LSAC
Sbjct: 425 YGNEALEMFSRMCEVQLKPDEVTFVGVLSAC 455
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 133/336 (39%), Gaps = 39/336 (11%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
M ++ L+ + A L + + IH Y + L + K D+ V N
Sbjct: 329 MLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDD-----VLLKN 383
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
+I K ++ A +F+ +KD+ ++N M+ GY GY +AL++F M +
Sbjct: 384 AVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGY-GMHGYGNEALEMFSRM--CEVQ 440
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMV--KTSNDASGFA--VSSLIDMYSKCRCY 176
++ DE T L+ C + GF Q F+V K+ D + + +IDM +
Sbjct: 441 LKPDEVTFVGVLSACS---HAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQL 497
Query: 177 EEACRVFEGCTEEVNLISKNAMVAACCREGEMEM----ALKTFWRQPELNDAVSWNTLIS 232
+EA + E N + A++AAC + A + F +PE S+ + +
Sbjct: 498 DEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPE--HCGSYVLMSN 555
Query: 233 GYVQNGDAEEGLKLFVRMGENGVR------WNE-----HTFAS-------ALSACCGLRN 274
Y G EE L++ M + VR W E H F S A S GL +
Sbjct: 556 VYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAHSIYAGLNS 615
Query: 275 VKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
+ H +V +P + + VY C M
Sbjct: 616 LTARLREHGYVPDVFCFFSPLLLDLPILVYFVCTPM 651
>gi|297796453|ref|XP_002866111.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311946|gb|EFH42370.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 829
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 191/704 (27%), Positives = 330/704 (46%), Gaps = 112/704 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +KAGL + L +Y K +L ++RK+FDE+PERNV +W
Sbjct: 196 HGYVVKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAW------------- 242
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
N+++ GY+ G +A++LF +M+ E + TV++ L
Sbjct: 243 ------------------NALMVGYVQ-NGMNEEAIRLFSDMRK--EGVEPTRVTVSTCL 281
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ + V G+Q HA + + +SL++ Y
Sbjct: 282 SASANMGGVEEGKQSHAIAIVNGLELDNILGTSLLNFY---------------------- 319
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
C+ G +E A F R + D V+WN +ISGYVQ G E + + M
Sbjct: 320 ----------CKVGLIEYAEMVFDRMID-KDVVTWNLIISGYVQQGLVENAIYMCQLMRL 368
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM-- 310
++++ T A+ +SA +N+K KE+ + +++ S+ ++S ++D+Y KC ++
Sbjct: 369 EKLKYDCVTLATLMSAAARTQNLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVD 428
Query: 311 ---------------------NYAESMLLLKGVR------------NSFSISSMIVGYSL 337
YAES L +G+R N + + +I+
Sbjct: 429 AKKVFDSTAEKDLILWNTLLAAYAESGLSGEGLRLFYGMQLEGVPPNVITWNLIILSLLR 488
Query: 338 QGNMEEARRHFDSLTE----KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDAL 393
G ++EA+ F + N++ WT + +G V+ C L + + G+ +A+
Sbjct: 489 NGEVDEAKDMFLQMQSSGIFPNLISWTTMMNGMVQ-NGCSEEAILFLRKMQESGLRPNAV 547
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST-LVDMYSKCGNMTYAEIIFQN 452
+ + L ACA A+LH G+ IH YI+R I T LVDMY+KCG++ AE +F +
Sbjct: 548 SITVALSACANLASLHFGRSIHGYIIRNLQHSSSVSIETSLVDMYAKCGDINKAEKVFGS 607
Query: 453 FIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMG 512
+ +L LYN MI+ YA +G+ ++AI L+ + G+KPD +T +LSA H G
Sbjct: 608 KLYSELPLYNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDNNQA 667
Query: 513 EKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCR 572
+ M + + ++P +HY M+DL A Q +KA+ ++ +P + DA ++ S + C
Sbjct: 668 TEIVTEMVSKHGMNPCLEHYGLMVDLLASAGQTDKALRLIEEMPYKPDARMIQSLVASCN 727
Query: 573 LNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGC 632
+EL +L+ E +N YV ++N YA EG+W E+ ++R+ M+ + GC
Sbjct: 728 KQPKSELVDYLSRQLIESEPDNSGNYVTISNAYAVEGSWDEVVKMREIMKAKGLKKKPGC 787
Query: 633 SWVYVEHE-IHIFTVGDVSHPKTNAIYSVLAIFTGELYEIAGAF 675
SW+ ++ E +H+F D +H + N I +LA+ LY++ F
Sbjct: 788 SWIQIKGEGVHVFVANDKTHIRINEIQRILALL---LYDMWSDF 828
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 127/540 (23%), Positives = 237/540 (43%), Gaps = 102/540 (18%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
++E H AI GL L I L++ Y K L+ + +FD M +++V +WN IIS
Sbjct: 290 VEEGKQSHAIAIVNGLELDNILGTSLLNFYCKVGLIEYAEMVFDRMIDKDVVTWNLIISG 349
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
++ G + Y ++L E ++ D
Sbjct: 350 YVQQ--------------------------GLVENAIYMCQLMRL--------EKLKYDC 375
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
T+ + ++ + N+ G+++ + ++ S ++ S+++DMY+KC +A +VF+
Sbjct: 376 VTLATLMSAAARTQNLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDS 435
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFW----------------------RQPELND 223
T E +LI N ++AA G L+ F+ R E+++
Sbjct: 436 -TAEKDLILWNTLLAAYAESGLSGEGLRLFYGMQLEGVPPNVITWNLIILSLLRNGEVDE 494
Query: 224 A----------------VSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALS 267
A +SW T+++G VQNG +EE + +M E+G+R N + ALS
Sbjct: 495 AKDMFLQMQSSGIFPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAVSITVALS 554
Query: 268 ACCGLRNVKCAKEIHSWVLKNGLISNPF-VSSGIVDVYCKCENMNYAESMLLLKGVRNSF 326
AC L ++ + IH ++++N S+ + + +VD+Y KC ++N AE + K
Sbjct: 555 ACANLASLHFGRSIHGYIIRNLQHSSSVSIETSLVDMYAKCGDINKAEKVFGSKLYSELP 614
Query: 327 SISSMIVGYSLQGNMEEARRHFDSLT----EKNVVVWTALFSGYVKAQNCEALFDLLSEF 382
++MI Y+L GN++EA + SL + + + T + S A + ++++E
Sbjct: 615 LYNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDNNQATEIVTEM 674
Query: 383 VTKEGVVT----DALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYS 438
V+K G+ L++ +L A AL I M + D ++I +LV +
Sbjct: 675 VSKHGMNPCLEHYGLMVDLLASAGQTDKALR-------LIEEMPYKPDARMIQSLV---A 724
Query: 439 KCGNMTYAEIIFQNFIERDLVL--------YNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
C +E++ +++ R L+ Y + YA G ++ + + E M KG+K
Sbjct: 725 SCNKQPKSELV--DYLSRQLIESEPDNSGNYVTISNAYAVEGSWDEVVKMREIMKAKGLK 782
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 130/521 (24%), Positives = 221/521 (42%), Gaps = 78/521 (14%)
Query: 48 FDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADA 107
F+ +P FS ++ S+ K HD + S H+ S LC G +A
Sbjct: 6 FNTIPINLPFSVSSKPSS--KQHDDQALNPSSTSYFHR-----VSSLC----KNGEIKEA 54
Query: 108 LKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLI 167
L L EM ++R+ L CV ++ G+Q+HA ++K
Sbjct: 55 LSLVTEMDF--RNLRIGPEIYGEILQGCVYERDLCTGKQIHARILKNG------------ 100
Query: 168 DMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSW 227
D Y+K E +F A C ++ L T R + + SW
Sbjct: 101 DFYAKNEYIETKLVIF----------------YAKCDALDIAEVLFTKLR---VRNVFSW 141
Query: 228 NTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLK 287
+I + G E L FV M EN + + + AC L+ + + +H +V+K
Sbjct: 142 AAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVK 201
Query: 288 NGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRH 347
GL FV+S + D+Y KC G +++AR+
Sbjct: 202 AGLEDCVFVASSLADMYGKC-------------------------------GVLDDARKV 230
Query: 348 FDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAA 407
FD + E+NVV W AL GYV+ E L S+ + KEGV + + L A A
Sbjct: 231 FDEIPERNVVAWNALMVGYVQNGMNEEAIRLFSD-MRKEGVEPTRVTVSTCLSASANMGG 289
Query: 408 LHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIAC 467
+ GK+ HA + G+++D L ++L++ Y K G + YAE++F I++D+V +N++I+
Sbjct: 290 VEEGKQSHAIAIVNGLELDNILGTSLLNFYCKVGLIEYAEMVFDRMIDKDVVTWNLIISG 349
Query: 468 YAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISP 527
Y G E AI + + M + +K D VT ++SA ++++G K +
Sbjct: 350 YVQQGLVENAIYMCQLMRLEKLKYDCVTLATLMSAAARTQNLKLG-KEVQCYCIRHSFES 408
Query: 528 ETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFL 568
+ + ++D+Y + + A + S E+D ++ + L
Sbjct: 409 DIVLASTVMDMYAKCGSIVDAKKVFDST-AEKDLILWNTLL 448
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/308 (19%), Positives = 130/308 (42%), Gaps = 76/308 (24%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R+ NLK I+ + + ++ +Y+K + +++K+FD E+++ WNT
Sbjct: 387 RTQNLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTAEKDLILWNT 446
Query: 62 IISA-----------------------------------CIKSHDLKQARSLF----DSS 82
+++A +++ ++ +A+ +F S
Sbjct: 447 LLAAYAESGLSGEGLRLFYGMQLEGVPPNVITWNLIILSLLRNGEVDEAKDMFLQMQSSG 506
Query: 83 PHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVG 142
+L+++ +M+ G + G +A+ +MQ + +R + ++T L+ C L ++
Sbjct: 507 IFPNLISWTTMMNGMVQ-NGCSEEAILFLRKMQ--ESGLRPNAVSITVALSACANLASLH 563
Query: 143 FGRQLHAFMVKTSNDASGFAV-SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAA 201
FGR +H ++++ +S ++ +SL+DMY+KC +A +VF
Sbjct: 564 FGRSIHGYIIRNLQHSSSVSIETSLVDMYAKCGDINKAEKVF------------------ 605
Query: 202 CCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHT 261
K + P +N +IS Y G+ +E + L+ + G++ + T
Sbjct: 606 ---------GSKLYSELP------LYNAMISAYALYGNLKEAIALYRSLEGVGLKPDNIT 650
Query: 262 FASALSAC 269
+ LSAC
Sbjct: 651 ITNVLSAC 658
>gi|297804490|ref|XP_002870129.1| hypothetical protein ARALYDRAFT_329829 [Arabidopsis lyrata subsp.
lyrata]
gi|297315965|gb|EFH46388.1| hypothetical protein ARALYDRAFT_329829 [Arabidopsis lyrata subsp.
lyrata]
Length = 853
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 164/486 (33%), Positives = 249/486 (51%), Gaps = 62/486 (12%)
Query: 178 EACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQN 237
EA ++F+ E + S N M++ R G E A F R P DA SWNT+I+GY +
Sbjct: 111 EAHQLFDEIPEP-DTFSYNIMLSCYVRNGNFEKAQSFFNRMP-FKDAASWNTMITGYARR 168
Query: 238 GDAEEGLKLFVRMGE-NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFV 296
G+ E+ LF M E N V WN
Sbjct: 169 GEMEKARVLFYSMMEKNEVSWN-------------------------------------- 190
Query: 297 SSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT-EKN 355
++ Y +C ++ A R + ++MI GY +E A F +T +KN
Sbjct: 191 --AMISGYIECGDLEKAAHFFKAAPFRGVVAWTAMITGYMKAKKVELAEAMFKDMTVKKN 248
Query: 356 VVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIH 415
+V W A+ SGYV+ E L + +EG+ ++ L L C+ +AL G++IH
Sbjct: 249 LVTWNAMISGYVENSRPEDGLKLFRAML-EEGIRPNSSGLSSALLGCSELSALCLGRQIH 307
Query: 416 AYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEE 475
+ MY KCG + A +F+ ++D+V +N MI+ YA HG+ E
Sbjct: 308 QIV-----------------MYCKCGELGDAWKLFEAMKKKDVVAWNAMISGYAQHGNAE 350
Query: 476 KAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACM 535
KA+ LF EM + KPD +TFVA+L A H G V++G YF+SM DY++ P DHY CM
Sbjct: 351 KALCLFHEMRDSKTKPDWITFVAVLLACNHAGLVDIGMTYFDSMVRDYRVEPRPDHYTCM 410
Query: 536 IDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNK 595
+DL GRA ++E+A++ ++S+P A + G+ L CR+++N ELA A EKLL L+ N
Sbjct: 411 VDLLGRAGKVEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLELDPRNA 470
Query: 596 ARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTN 655
A YVQLAN+YA++ W ++ R+RK+M+ + G SW+ + ++IH F D HP+ +
Sbjct: 471 AGYVQLANIYASKNLWEDVARVRKRMKESNVVKVPGYSWIEIRNKIHHFRSSDRIHPELD 530
Query: 656 AIYSVL 661
+I+ L
Sbjct: 531 SIHKKL 536
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 153/344 (44%), Gaps = 65/344 (18%)
Query: 25 TITTNQL-IHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP 83
T++ N L + I + + E+ +LFDE+PE + FS+N ++S +++ + ++A+S F+ P
Sbjct: 92 TVSWNSLLVGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNGNFEKAQSFFNRMP 151
Query: 84 HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGF 143
KD ++N+M+ GY G A LF M +E
Sbjct: 152 FKDAASWNTMITGYAR-RGEMEKARVLFYSMMEKNE------------------------ 186
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
+ +++I Y +C E+A F+ +++ AM+
Sbjct: 187 -----------------VSWNAMISGYIECGDLEKAAHFFKAAPFR-GVVAWTAMITGYM 228
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
+ ++E+A F + V+WN +ISGYV+N E+GLKLF M E G+R N +
Sbjct: 229 KAKKVELAEAMFKDMTVKKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLS 288
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
SAL C L + ++IH V+ YCKC + A + +
Sbjct: 289 SALLGCSELSALCLGRQIHQIVM-----------------YCKCGELGDAWKLFEAMKKK 331
Query: 324 NSFSISSMIVGYSLQGNMEEARRHF----DSLTEKNVVVWTALF 363
+ + ++MI GY+ GN E+A F DS T+ + + + A+
Sbjct: 332 DVVAWNAMISGYAQHGNAEKALCLFHEMRDSKTKPDWITFVAVL 375
>gi|224099379|ref|XP_002311462.1| predicted protein [Populus trichocarpa]
gi|222851282|gb|EEE88829.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 172/520 (33%), Positives = 256/520 (49%), Gaps = 63/520 (12%)
Query: 208 MEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALS 267
ME A K F + PE N ++ WN + GY QN ++ + LF +M V N TF L
Sbjct: 1 MENAHKVFDQIPEPNASI-WNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILK 59
Query: 268 ACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFS 327
+C + +K +E+H +V+K+G +NPFV++ ++D+Y ++ A + RN +
Sbjct: 60 SCVKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIA 119
Query: 328 ISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN---------------- 371
++MI GY ++ ARR FD E+++V+W + SGY++A++
Sbjct: 120 WTAMINGYITCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDKMPNKDV 179
Query: 372 ------------------CEALFDLLSEF-----------VTKEG--------------- 387
CE LF+ + E T+ G
Sbjct: 180 MSWNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRMLVD 239
Query: 388 --VVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTY 445
VV + LV +L ACA AL GK +H Y G + + + + L+DMY+KCG +
Sbjct: 240 GTVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVET 299
Query: 446 AEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRH 505
A +F++ +DL+ +N +I A HGH A+ LF M G PD +TF+ IL A H
Sbjct: 300 ALDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGILCACTH 359
Query: 506 CGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILG 565
G VE G YF SMT DY I P +HY C++DL GRA L A++F++ +P E DAVI
Sbjct: 360 MGLVEDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIEADAVIWA 419
Query: 566 SFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMK 625
+ L CR+ +N ELA A EKL+ E N A YV L+N+Y G W ++ R++ MR
Sbjct: 420 ALLGACRVYKNVELAELALEKLIEFEPKNPANYVMLSNIYGDFGRWKDVARLKVAMRDTG 479
Query: 626 GNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFT 665
+ GCS + V + F D HP+ IY L T
Sbjct: 480 FKKLPGCSLIEVNDYLVEFYSLDERHPEKEQIYGTLRTLT 519
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 127/306 (41%), Gaps = 57/306 (18%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
LKE H IK+G LI +Y+ + + ++F EM ERNV +W +I+
Sbjct: 67 LKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAWTAMING 126
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE---HIR 122
I DL AR LFD +P +D+V +N+M+ GYI A+ A +LF +M + D +
Sbjct: 127 YITCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDV-IRARELFDKMPNKDVMSWNTV 185
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
++ + + C +L R + F+ ++LI Y++ C+ E
Sbjct: 186 LNGYASNGDVMACERLFEEMPERNV-------------FSWNALIGGYTRNGCFSEVLSA 232
Query: 183 FEGCTEEVNLISKNA----MVAACCREGEM------------------------------ 208
F+ + ++ +A +++AC R G +
Sbjct: 233 FKRMLVDGTVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYA 292
Query: 209 -----EMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
E AL F + + D +SWNT+I G +G + L LF M G + TF
Sbjct: 293 KCGVVETALDVF-KSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFI 351
Query: 264 SALSAC 269
L AC
Sbjct: 352 GILCAC 357
>gi|356561794|ref|XP_003549163.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 615
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 185/653 (28%), Positives = 298/653 (45%), Gaps = 106/653 (16%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+++ + H +K G T L+ +YSK + + +R++FDEMP+R+V SWN ++S
Sbjct: 61 SIQHGTMLHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVS 120
Query: 65 ACIKSHDLKQARSLFDS----SPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
A + + QA SL T+ S+L GY N + +E L
Sbjct: 121 AYSRRSSMDQALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLL------------ 168
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVS-SLIDMYSKCRCYEEA 179
G+ +H ++K +++ SL+ MY + +EA
Sbjct: 169 -----------------------GKSIHCCLIKLGIVYLEVSLANSLMGMYVQFCLMDEA 205
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
+VF+ E+ +SW T+I GYV+ G
Sbjct: 206 RKVFDLMDEK---------------------------------SIISWTTMIGGYVKIGH 232
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
A E LF +M V + F + +S C +R++ A +HS VLK G V +
Sbjct: 233 AVEAYGLFYQMQHQSVGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVENL 292
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
++ +Y KC GN+ ARR FD + EK+++ W
Sbjct: 293 LITMYAKC-------------------------------GNLTSARRIFDLIIEKSMLSW 321
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
T++ +GYV + DL + + + + L ++ ACA +L G+EI YI
Sbjct: 322 TSMIAGYVHLGHPGEALDLFRRMI-RTDIRPNGATLATVVSACADLGSLSIGQEIEEYIF 380
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
G++ D+++ ++L+ MYSKCG++ A +F+ ++DL ++ MI YA HG +AI
Sbjct: 381 LNGLESDQQVQTSLIHMYSKCGSIVKAREVFERVTDKDLTVWTSMINSYAIHGMGNEAIS 440
Query: 480 LFEEMLE-KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
LF +M +GI PDA+ + ++ A H G VE G KYF SM D+ I+P +H C+IDL
Sbjct: 441 LFHKMTTAEGIMPDAIVYTSVFLACSHSGLVEEGLKYFKSMQKDFGITPTVEHCTCLIDL 500
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARY 598
GR QL+ A+ ++ +P + A + G L+ CR++ N EL A +LL + Y
Sbjct: 501 LGRVGQLDLALNAIQGMPPDVQAQVWGPLLSACRIHGNVELGELATVRLLDSSPGSSGSY 560
Query: 599 VQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSH 651
V +AN+Y + G W E +R M G + +G S V V H F VG+ S
Sbjct: 561 VLMANLYTSLGKWKEAHMMRNSMDGKGLVKESGWSQVEVTDTYHTFAVGNQSQ 613
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 132/296 (44%), Gaps = 38/296 (12%)
Query: 210 MALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
M+L+ +R+ +WN +I NG + L ++ M +GV N T+ L AC
Sbjct: 1 MSLRPSFRR----SLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKAC 56
Query: 270 CGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSIS 329
L +++ +H VLK G ++ FV + +VD+Y KC
Sbjct: 57 ANLPSIQHGTMLHGHVLKLGFQADTFVQTALVDMYSKCS--------------------- 95
Query: 330 SMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVV 389
++ AR+ FD + +++VV W A+ S Y + + + LL E
Sbjct: 96 ----------HVASARQVFDEMPQRSVVSWNAMVSAYSRRSSMDQALSLLKEMWVLGFEP 145
Query: 390 TDALILVILLGACALQA-ALH-PGKEIHAYILRMG-VQMDKKLISTLVDMYSKCGNMTYA 446
T + + IL G L + H GK IH ++++G V ++ L ++L+ MY + M A
Sbjct: 146 TASTFVSILSGYSNLDSFEFHLLGKSIHCCLIKLGIVYLEVSLANSLMGMYVQFCLMDEA 205
Query: 447 EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
+F E+ ++ + MI Y GH +A LF +M + + D V F+ ++S
Sbjct: 206 RKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQMQHQSVGIDFVVFLNLISG 261
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 72/125 (57%)
Query: 386 EGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTY 445
GV + L +LL ACA ++ G +H ++L++G Q D + + LVDMYSKC ++
Sbjct: 40 SGVHGNNLTYPLLLKACANLPSIQHGTMLHGHVLKLGFQADTFVQTALVDMYSKCSHVAS 99
Query: 446 AEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRH 505
A +F +R +V +N M++ Y+ ++A+ L +EM G +P A TFV+ILS + +
Sbjct: 100 ARQVFDEMPQRSVVSWNAMVSAYSRRSSMDQALSLLKEMWVLGFEPTASTFVSILSGYSN 159
Query: 506 CGSVE 510
S E
Sbjct: 160 LDSFE 164
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 182/616 (29%), Positives = 297/616 (48%), Gaps = 77/616 (12%)
Query: 78 LFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVK 137
LF+S+ + ++ + SML Y + + + A + ++ +MQ +R D F + +K
Sbjct: 56 LFNSTLNPNVFVFTSMLRFYSHLQDH-AKVVLMYEQMQGCG--VRPDAFVYP----ILIK 108
Query: 138 LLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE--------- 188
G G HA ++K + + F +++IDMY++ A +VF+ +
Sbjct: 109 SAGTG-GIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWN 167
Query: 189 -----------------------EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAV 225
E N+I+ AMV + ++E A + F PE V
Sbjct: 168 AMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPE-RSVV 226
Query: 226 SWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWV 285
SWN ++SGY QNG AEE L+LF M G+ +E T+ + +SAC + A + +
Sbjct: 227 SWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTL 286
Query: 286 LKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEAR 345
+ + N FV + ++D+Y K +++ A + RN + +SMI GY+ G A
Sbjct: 287 HQKRIQLNCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMA- 345
Query: 346 RHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQ 405
+L E +T + + D + +V ++ AC
Sbjct: 346 ------------------------------IELFKEMITAKKLTPDEVTMVSVISACGHL 375
Query: 406 AALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMI 465
AL G + ++ +++ + ++ MYS+CG+M A+ +FQ RD+V YN +I
Sbjct: 376 GALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLI 435
Query: 466 ACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKI 525
+ +A HGH +AI L M E GI+PD VTF+ +L+A H G +E G K F S+
Sbjct: 436 SGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIK----- 490
Query: 526 SPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEE 585
P DHYACM+DL GR +LE A M+ +P E A + GS LN R+++ EL A
Sbjct: 491 DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAAN 550
Query: 586 KLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFT 645
KL LE +N ++ L+N+YA+ G W ++ RIR+ M+ + G SWV ++H F
Sbjct: 551 KLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFI 610
Query: 646 VGDVSHPKTNAIYSVL 661
V D SH +++ IY +L
Sbjct: 611 VADRSHERSDDIYQLL 626
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 129/534 (24%), Positives = 226/534 (42%), Gaps = 122/534 (22%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLV 88
N ++ Y K +++ LFD MPERNV +W +++ K DL+ AR FD P + +V
Sbjct: 167 NAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVV 226
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCV----KLLNVGFG 144
++N+ML GY G +AL+LF EM +A I DE T + ++ C L
Sbjct: 227 SWNAMLSGYAQ-NGLAEEALRLFDEMVNAG--IEPDETTWVTVISACSSRGDPCLAASLV 283
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
R LH ++ + F ++L+DMY+K + A ++F N+++ N+M+A
Sbjct: 284 RTLHQKRIQL----NCFVRTALLDMYAKFGDLDSARKLFNTMPGR-NVVTWNSMIA---- 334
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM-GENGVRWNEHTFA 263
GY QNG + ++LF M + +E T
Sbjct: 335 ----------------------------GYAQNGQSAMAIELFKEMITAKKLTPDEVTMV 366
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
S +SAC L A E+ +WV++ F++ + + N
Sbjct: 367 SVISACGHL----GALELGNWVVR-------FLTENQIKLSISGHN-------------- 401
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV 383
+MI YS G+ME+A+R F + ++VV + L SG+ + +L+S +
Sbjct: 402 ------AMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMST-M 454
Query: 384 TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNM 443
+ G+ D + + +L AC+ HA +L G ++ + + +D Y+
Sbjct: 455 KEGGIEPDRVTFIGVLTACS-----------HAGLLEEGRKVFESIKDPAIDHYA----- 498
Query: 444 TYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAF 503
M+ G E A E M ++P A + ++L+A
Sbjct: 499 -------------------CMVDLLGRVGELEDAKRTMERM---PMEPHAGVYGSLLNAS 536
Query: 504 RHCGSVEMGEKYFNSMTADYKISPE-TDHYACMIDLY---GRANQLEKAIEFMK 553
R VE+GE N + +++ P+ + ++ + ++Y GR +E+ E MK
Sbjct: 537 RIHKQVELGELAANKL---FELEPDNSGNFILLSNIYASAGRWKDVERIREAMK 587
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/154 (20%), Positives = 73/154 (47%), Gaps = 11/154 (7%)
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKC-GNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
+++HA I+ + ++ L++ ++ Y ++F + + ++ ++ M+ Y+H
Sbjct: 18 RQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNPNVFVFTSMLRFYSH 77
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD 530
K +L++E+M G++PDA + ++ + G+ +G F++ K+ +D
Sbjct: 78 LQDHAKVVLMYEQMQGCGVRPDAFVYPILIKS---AGTGGIG---FHAHV--LKLGHGSD 129
Query: 531 HYA--CMIDLYGRANQLEKAIEFMKSIPTEEDAV 562
+ +ID+Y R + A + IP E V
Sbjct: 130 AFVRNAVIDMYARLGPIGHARKVFDEIPDYERKV 163
>gi|297605437|ref|NP_001057211.2| Os06g0228900 [Oryza sativa Japonica Group]
gi|255676854|dbj|BAF19125.2| Os06g0228900 [Oryza sativa Japonica Group]
Length = 695
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 190/643 (29%), Positives = 310/643 (48%), Gaps = 76/643 (11%)
Query: 26 ITTNQLIHIYSKH---NLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSS 82
++ N L+ YS + L +R+LFDEMP+R+V +WNT++ A + + +AR LFD
Sbjct: 63 VSWNTLLAAYSASPHPDHLAAARRLFDEMPQRDVVTWNTLLGAYARRGLMDEARRLFDEM 122
Query: 83 PHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE---HIRMDEFTVTSTLNLCVKLL 139
P ++ ++N+M+ G+ A G AL +F M + D + FT L+ +LL
Sbjct: 123 PQRNAASWNTMVTGFF-AAGQVVKALDVFDAMPAKDSASLSTMVSGFTKNGMLHEAEELL 181
Query: 140 NVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMV 199
++L T D + A ++LI Y + + +A R+F+ M+
Sbjct: 182 T----KRLSV----TDMDKAVDAYNTLIVAYGQAGRFSDAKRLFD-------------MI 220
Query: 200 AACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNE 259
+ M + K F R + VSWN+++ Y++ GD LF M +
Sbjct: 221 PKGQYQHNM-LKRKGFER-----NVVSWNSMMICYIKAGDVCSARALFNEMPD------- 267
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLL 319
K++ SW N +IS Y + +M +E +
Sbjct: 268 -------------------KDLVSW---NTMISG----------YTQASDMKESEKLFWE 295
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLL 379
++ S + +I G+ +G E AR FD + E+ + W + SGY K N + L
Sbjct: 296 MPDPDTVSWNLIIQGFMQKGEAEHARGFFDRMPERGTISWNTMISGYEKNGNYISSVKLF 355
Query: 380 SEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
S+ + + G + D +L ACA L G +IH + + V D + + L+ MYS+
Sbjct: 356 SKML-EVGEIPDRHTFSSVLAACASIPMLGLGAQIHQLVEKSFVP-DTAISNALITMYSR 413
Query: 440 CGNMTYAEIIF-QNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVA 498
CG + AE IF Q ++DLV +N +I CY HHG KA+ LF+EM + P +TFV+
Sbjct: 414 CGALNDAEAIFKQMHTKKDLVSWNALIGCYEHHGRATKALQLFKEMRRAKVMPTHITFVS 473
Query: 499 ILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE 558
+LSA + G V G F++M +Y I +HYA +++L GR QL+ A+E + S+P
Sbjct: 474 LLSACVNAGLVSEGRMVFDTMVHEYGIVARIEHYAALVNLIGRHGQLDDALEVINSMPMA 533
Query: 559 EDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIR 618
D + G+FL C +N LA A ++L + ++ A YV + N++A EG W +R
Sbjct: 534 PDRSVWGAFLGACTAKKNEPLAQMAAKELSTINPDSSAPYVLIHNLHAHEGKWGSAAVVR 593
Query: 619 KQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
++M + G SW+ +E ++H+F GD HP I+SVL
Sbjct: 594 EEMERQGIYKQPGYSWIDLEGKMHVFISGDTWHPNAQEIFSVL 636
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 135/581 (23%), Positives = 227/581 (39%), Gaps = 124/581 (21%)
Query: 24 TTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII---SACIKSHDLKQARSLFD 80
+ +T N L+ ++ R +R+ FD MP R+ SWNT++ SA L AR LFD
Sbjct: 30 SVVTWNSLLAGLARRPDARAAREFFDAMPVRDAVSWNTLLAAYSASPHPDHLAAARRLFD 89
Query: 81 SSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLN 140
P +D+VT+N++L Y G +A +LF EM + T VK L+
Sbjct: 90 EMPQRDVVTWNTLLGAYAR-RGLMDEARRLFDEMPQRNAASWNTMVTGFFAAGQVVKALD 148
Query: 141 V-----------------GFGRQ---------LHAFMVKTSNDASGFAVSSLIDMYSKCR 174
V GF + L + T D + A ++LI Y +
Sbjct: 149 VFDAMPAKDSASLSTMVSGFTKNGMLHEAEELLTKRLSVTDMDKAVDAYNTLIVAYGQAG 208
Query: 175 CYEEACRVFEGCTE-------------EVNLISKNAMVAACCREG--------------- 206
+ +A R+F+ + E N++S N+M+ + G
Sbjct: 209 RFSDAKRLFDMIPKGQYQHNMLKRKGFERNVVSWNSMMICYIKAGDVCSARALFNEMPDK 268
Query: 207 ----------------EMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
+M+ + K FW P+ D VSWN +I G++Q G+AE F RM
Sbjct: 269 DLVSWNTMISGYTQASDMKESEKLFWEMPD-PDTVSWNLIIQGFMQKGEAEHARGFFDRM 327
Query: 251 GENG-VRWN------------------------------EHTFASALSACCGLRNVKCAK 279
E G + WN HTF+S L+AC + +
Sbjct: 328 PERGTISWNTMISGYEKNGNYISSVKLFSKMLEVGEIPDRHTFSSVLAACASIPMLGLGA 387
Query: 280 EIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESML-LLKGVRNSFSISSMIVGYSLQ 338
+IH V K+ + + +S+ ++ +Y +C +N AE++ + ++ S +++I Y
Sbjct: 388 QIHQLVEKS-FVPDTAISNALITMYSRCGALNDAEAIFKQMHTKKDLVSWNALIGCYEHH 446
Query: 339 GNMEEARRHFDSLTEKNV----VVWTALFSGYVKA---QNCEALFDLLSEFVTKEGVVTD 391
G +A + F + V + + +L S V A +FD + V + G+V
Sbjct: 447 GRATKALQLFKEMRRAKVMPTHITFVSLLSACVNAGLVSEGRMVFDTM---VHEYGIVAR 503
Query: 392 ALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQ 451
L+ L E+ I M + D+ + + + N A++ +
Sbjct: 504 IEHYAALVNLIGRHGQLDDALEV---INSMPMAPDRSVWGAFLGACTAKKNEPLAQMAAK 560
Query: 452 NF--IERDLVLYNVMI-ACYAHHGHEEKAILLFEEMLEKGI 489
I D V+I +AH G A ++ EEM +GI
Sbjct: 561 ELSTINPDSSAPYVLIHNLHAHEGKWGSAAVVREEMERQGI 601
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 121/267 (45%), Gaps = 38/267 (14%)
Query: 18 KAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQ--- 74
+ G ++ N ++ Y K + +R LF+EMP++++ SWNT+IS ++ D+K+
Sbjct: 232 RKGFERNVVSWNSMMICYIKAGDVCSARALFNEMPDKDLVSWNTMISGYTQASDMKESEK 291
Query: 75 ----------------------------ARSLFDSSPHKDLVTYNSMLCGYINAEGYEAD 106
AR FD P + +++N+M+ GY G
Sbjct: 292 LFWEMPDPDTVSWNLIIQGFMQKGEAEHARGFFDRMPERGTISWNTMISGY-EKNGNYIS 350
Query: 107 ALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSL 166
++KLF +M E D T +S L C + +G G Q+H + K+ + + ++L
Sbjct: 351 SVKLFSKMLEVGE--IPDRHTFSSVLAACASIPMLGLGAQIHQLVEKSFVPDTAIS-NAL 407
Query: 167 IDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTF---WRQPELND 223
I MYS+C +A +F+ + +L+S NA++ G AL+ F R +
Sbjct: 408 ITMYSRCGALNDAEAIFKQMHTKKDLVSWNALIGCYEHHGRATKALQLFKEMRRAKVMPT 467
Query: 224 AVSWNTLISGYVQNGDAEEGLKLFVRM 250
+++ +L+S V G EG +F M
Sbjct: 468 HITFVSLLSACVNAGLVSEGRMVFDTM 494
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 95/221 (42%), Gaps = 16/221 (7%)
Query: 339 GNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVIL 398
G ARR FD+L ++VV W +L +G + + A + ++ V + L+
Sbjct: 14 GRYGAARRLFDALPARSVVTWNSLLAGLARRPDARAAREFFDAMPVRDAVSWNTLL---- 69
Query: 399 LGACALQAALHPGKEIHAYILRMGVQMDKKLI---STLVDMYSKCGNMTYAEIIFQNFIE 455
A A+ HP + A R+ +M ++ + +TL+ Y++ G M A +F +
Sbjct: 70 ---AAYSASPHP--DHLAAARRLFDEMPQRDVVTWNTLLGAYARRGLMDEARRLFDEMPQ 124
Query: 456 RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKY 515
R+ +N M+ + G KA+ +F+ M K D+ + ++S F G + E+
Sbjct: 125 RNAASWNTMVTGFFAAGQVVKALDVFDAMPAK----DSASLSTMVSGFTKNGMLHEAEEL 180
Query: 516 FNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIP 556
+ + D Y +I YG+A + A IP
Sbjct: 181 LTKRLSVTDMDKAVDAYNTLIVAYGQAGRFSDAKRLFDMIP 221
>gi|347954464|gb|AEP33732.1| chlororespiratory reduction 21, partial [Draba nemorosa]
Length = 829
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 194/700 (27%), Positives = 323/700 (46%), Gaps = 112/700 (16%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H KAGL + L +Y K LL ++RK+FDE+P+R V +W
Sbjct: 191 HGYVAKAGLHDCVFVASSLADMYGKCGLLDDARKVFDEIPDRTVVAW------------- 237
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
N+++ GY+ G +A++L M+ +E I TV++ L
Sbjct: 238 ------------------NALMVGYVQ-NGMNQEAIRLLSAMR--NEGIEPTRVTVSTCL 276
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ + + G+Q HA + + +S+++ Y
Sbjct: 277 SASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFY---------------------- 314
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
C+ G +E A F R E D V+WN LISGYVQ G E+ + + M
Sbjct: 315 ----------CKVGLIEYAEMIFDRMIE-KDVVTWNLLISGYVQQGLVEDAIHMCQLMRR 363
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM-- 310
+ ++ T +S +SA N+K KE+ + +++G +S+ ++S V++Y KC ++
Sbjct: 364 GNLNFDCVTLSSLMSAAARTHNLKLGKEVQCYCIRHGFVSDIVLASTAVEMYAKCGSIVD 423
Query: 311 ---------------------NYAESMLLLKGVR------------NSFSISSMIVGYSL 337
YAE L + +R N + +S+I+
Sbjct: 424 AKKVFNSTVEKDLILWNTLLAAYAEPGLSGEALRLFYEMQLEGVPPNVITWNSVILSLLR 483
Query: 338 QGNMEEARRHF----DSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDAL 393
G + EA+ F S N++ WT + +G V+ E L + + + G+ +
Sbjct: 484 NGQVNEAKDMFLQMQSSGISPNLISWTTMMNGLVQNGCSEEAIVYLRK-MQESGLRLNVF 542
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST-LVDMYSKCGNMTYAEIIFQN 452
+ + L ACA A+LH G+ IH YI+R I T LVDMY+KCG+++ AE +F +
Sbjct: 543 SITVALSACANLASLHFGRSIHGYIIRNQHHSSSVSIETSLVDMYAKCGDISKAERVFGS 602
Query: 453 FIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK-GIKPDAVTFVAILSAFRHCGSVEM 511
+ +L LYN MI+ YA +G+ ++A L+ + E GI+PD +T +LSA H G +
Sbjct: 603 KLYSELPLYNAMISAYALYGNVKEATALYRSLDEDVGIEPDNITITNVLSACHHAGDINQ 662
Query: 512 GEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVC 571
F M + + + P +HY M+DL A + EKA+ ++ +P + DA ++ S L C
Sbjct: 663 AIHIFTDMVSKHAMKPCLEHYGLMVDLLASAGETEKALRLIEEMPYKPDARMIQSLLASC 722
Query: 572 RLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAG 631
+EL LL E N YV ++NVYA EG+W E+G++R+ M+ + G
Sbjct: 723 NKQHKSELVEYLSRHLLESEPENSGNYVTISNVYAVEGSWDEVGKMREMMKVKGLKKKPG 782
Query: 632 CSWVYVEHE---IHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
CSW+ ++ E +H+F D +H + N I +LA+ T E+
Sbjct: 783 CSWIQIKGEEQGVHVFVANDKTHFRNNEIRRILALLTYEM 822
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 148/551 (26%), Positives = 241/551 (43%), Gaps = 102/551 (18%)
Query: 30 QLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVT 89
+L+ Y+K + L ++ LF ++ RNVFSW II
Sbjct: 107 KLVIFYAKCDALEVAQLLFSKLRARNVFSWAAIIG------------------------- 141
Query: 90 YNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHA 149
+ C EG AL F+EM + + D F V + C L FGR +H
Sbjct: 142 ---VRCRIGLVEG----ALMGFVEM--LENGLFPDNFVVPNVCKACGALQWSRFGRGVHG 192
Query: 150 FMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEME 209
++ K F SSL DMY KC ++A +VF+ E
Sbjct: 193 YVAKAGLHDCVFVASSLADMYGKCGLLDDARKVFD------------------------E 228
Query: 210 MALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
+ +T V+WN L+ GYVQNG +E ++L M G+ T ++ LSA
Sbjct: 229 IPDRT---------VVAWNALMVGYVQNGMNQEAIRLLSAMRNEGIEPTRVTVSTCLSAS 279
Query: 270 CGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSIS 329
+ ++ K+ H+ + NGL + + + I++ YCK + YAE +
Sbjct: 280 ANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMI------------- 326
Query: 330 SMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVV 389
FD + EK+VV W L SGYV+ E + + + + +
Sbjct: 327 ------------------FDRMIEKDVVTWNLLISGYVQQGLVEDAIH-MCQLMRRGNLN 367
Query: 390 TDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEII 449
D + L L+ A A L GKE+ Y +R G D L ST V+MY+KCG++ A+ +
Sbjct: 368 FDCVTLSSLMSAAARTHNLKLGKEVQCYCIRHGFVSDIVLASTAVEMYAKCGSIVDAKKV 427
Query: 450 FQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSV 509
F + +E+DL+L+N ++A YA G +A+ LF EM +G+ P+ +T+ +++ + G V
Sbjct: 428 FNSTVEKDLILWNTLLAAYAEPGLSGEALRLFYEMQLEGVPPNVITWNSVILSLLRNGQV 487
Query: 510 EMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLN 569
+ F M + ISP + M++ + E+AI +++ + +E + L F
Sbjct: 488 NEAKDMFLQMQSS-GISPNLISWTTMMNGLVQNGCSEEAIVYLRKM--QESGLRLNVFSI 544
Query: 570 VCRLNRNAELA 580
L+ A LA
Sbjct: 545 TVALSACANLA 555
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 125/536 (23%), Positives = 221/536 (41%), Gaps = 138/536 (25%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
++E H AI GL L I +++ Y K L+ + +FD M E++V +WN +IS
Sbjct: 285 IEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDRMIEKDVVTWNLLIS- 343
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
GY+ +G DA+ + M+ + + D
Sbjct: 344 ------------------------------GYVQ-QGLVEDAIHMCQLMRRGN--LNFDC 370
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
T++S ++ + N+ G+++ + ++ + S+ ++MY+KC +A +VF
Sbjct: 371 VTLSSLMSAAARTHNLKLGKEVQCYCIRHGFVSDIVLASTAVEMYAKCGSIVDAKKVFNS 430
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFW----------------------RQPELND 223
E+ +LI N ++AA G AL+ F+ R ++N+
Sbjct: 431 TVEK-DLILWNTLLAAYAEPGLSGEALRLFYEMQLEGVPPNVITWNSVILSLLRNGQVNE 489
Query: 224 A----------------VSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALS 267
A +SW T+++G VQNG +EE + +M E+G+R N + ALS
Sbjct: 490 AKDMFLQMQSSGISPNLISWTTMMNGLVQNGCSEEAIVYLRKMQESGLRLNVFSITVALS 549
Query: 268 ACCGLRNVKCAKEIHSWVLKNGLISNPF-VSSGIVDVYCKCENMNYAESMLLLKGVRNSF 326
AC L ++ + IH ++++N S+ + + +VD+Y KC +++ AE + K
Sbjct: 550 ACANLASLHFGRSIHGYIIRNQHHSSSVSIETSLVDMYAKCGDISKAERVFGSKLYSELP 609
Query: 327 SISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKE 386
++MI Y+L GN++EA + SL E
Sbjct: 610 LYNAMISAYALYGNVKEATALYRSLDE-------------------------------DV 638
Query: 387 GVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYA 446
G+ D + + +L AC H +I+ + I DM SK
Sbjct: 639 GIEPDNITITNVLSAC------HHAGDIN------------QAIHIFTDMVSK------- 673
Query: 447 EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
+ ++ L Y +M+ A G EKA+ L EEM KPDA ++L++
Sbjct: 674 -----HAMKPCLEHYGLMVDLLASAGETEKALRLIEEM---PYKPDARMIQSLLAS 721
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 124/293 (42%), Gaps = 34/293 (11%)
Query: 224 AVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHS 283
++S+ +S + G+ E L L MG VR + L C R++ ++IH+
Sbjct: 30 SISYFHRVSSLCKKGEIREALGLVTEMGSRNVRIGPEIYGEILQGCVYERDLSTGQQIHA 89
Query: 284 WVLKNG--LISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNM 341
+LKNG N ++ + +V Y KC+ + A+ +
Sbjct: 90 RILKNGDFYAKNEYIETKLVIFYAKCDALEVAQLL------------------------- 124
Query: 342 EEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGA 401
F L +NV W A+ + E E + + G+ D ++ + A
Sbjct: 125 ------FSKLRARNVFSWAAIIGVRCRIGLVEGALMGFVEML-ENGLFPDNFVVPNVCKA 177
Query: 402 CALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLY 461
C G+ +H Y+ + G+ + S+L DMY KCG + A +F +R +V +
Sbjct: 178 CGALQWSRFGRGVHGYVAKAGLHDCVFVASSLADMYGKCGLLDDARKVFDEIPDRTVVAW 237
Query: 462 NVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
N ++ Y +G ++AI L M +GI+P VT LSA + G +E G++
Sbjct: 238 NALMVGYVQNGMNQEAIRLLSAMRNEGIEPTRVTVSTCLSASANMGGIEEGKQ 290
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 133/292 (45%), Gaps = 46/292 (15%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R+ NLK I+ G + + + +Y+K + +++K+F+ E+++ WNT
Sbjct: 382 RTHNLKLGKEVQCYCIRHGFVSDIVLASTAVEMYAKCGSIVDAKKVFNSTVEKDLILWNT 441
Query: 62 IISACIKSHDLKQARSLF-----DSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQS 116
+++A + +A LF + P +++T+NS++ + G +A +F++MQS
Sbjct: 442 LLAAYAEPGLSGEALRLFYEMQLEGVP-PNVITWNSVILSLLR-NGQVNEAKDMFLQMQS 499
Query: 117 A---------------------------------DEHIRMDEFTVTSTLNLCVKLLNVGF 143
+ + +R++ F++T L+ C L ++ F
Sbjct: 500 SGISPNLISWTTMMNGLVQNGCSEEAIVYLRKMQESGLRLNVFSITVALSACANLASLHF 559
Query: 144 GRQLHAFMVKTSNDASGFAV-SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAAC 202
GR +H ++++ + +S ++ +SL+DMY+KC +A RVF G L NAM++A
Sbjct: 560 GRSIHGYIIRNQHHSSSVSIETSLVDMYAKCGDISKAERVF-GSKLYSELPLYNAMISAY 618
Query: 203 CREGEMEMALKTFWRQPE----LNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
G ++ A + E D ++ ++S GD + + +F M
Sbjct: 619 ALYGNVKEATALYRSLDEDVGIEPDNITITNVLSACHHAGDINQAIHIFTDM 670
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 176/587 (29%), Positives = 286/587 (48%), Gaps = 66/587 (11%)
Query: 75 ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNL 134
A S+F + D++T+NSML ++N+ AL+ + EM ++ D FT S L
Sbjct: 31 AYSVFAHTRVLDVLTWNSMLRAFVNSN-MPRRALQSYTEMLERSRNVP-DRFTFPSLLKG 88
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
C LL G+ LH +VK + + ++L++MY+ C
Sbjct: 89 CALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAAC--------------------- 127
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
G+++ A F R N V W ++ISGY++N E L L+ +M E+G
Sbjct: 128 -----------GDLKSARFLFERMGHRNKVV-WTSMISGYMKNHCPNEALLLYKKMEEDG 175
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
+E T A+ +SAC L+++ ++HS + + + + S +V++Y KC
Sbjct: 176 FSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKC------- 228
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEA 374
G+++ AR+ FD L++K+V W+AL GYVK
Sbjct: 229 ------------------------GDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTE 264
Query: 375 LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLV 434
L E + + + ++ ++ ACA L G+ +H YI R L ++L+
Sbjct: 265 ALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLI 324
Query: 435 DMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAV 494
DM+SKCG++ A+ IF + +DL+ +N M+ A HG +A+ F M ++PD +
Sbjct: 325 DMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEI 384
Query: 495 TFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKS 554
TF+ +L+A H G V+ G+K F + A Y + +++HY CM+DL RA L +A EF++
Sbjct: 385 TFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRV 444
Query: 555 IPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEM 614
+P + D I GS L CR+ N EL EA LL LE N Y+ L+N+YA W E+
Sbjct: 445 MPLQPDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEV 504
Query: 615 GRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
++R+ M + GCS V +++ H F GD SHP+ I +L
Sbjct: 505 KKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIML 551
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 114/556 (20%), Positives = 228/556 (41%), Gaps = 144/556 (25%)
Query: 4 LNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
L K + H Q +K L L+++Y+ L+ +R LF+ M RN W ++I
Sbjct: 93 LEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMI 152
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
S +K+H P++ L+ Y M +G+
Sbjct: 153 SGYMKNH-----------CPNEALLLYKKM-----EEDGFSP------------------ 178
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
DE T+ + ++ C +L ++G G +LH+ + + S+L++MY+KC + A +VF
Sbjct: 179 DEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVF 238
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
+ +++ D +W+ LI GYV+N + E
Sbjct: 239 DQLSDK---------------------------------DVYAWSALIFGYVKNNRSTEA 265
Query: 244 LKLFVRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
L+LF + G + +R NE T + +SAC L +++ + +H ++ + + +++ ++D
Sbjct: 266 LQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLID 325
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
++ KC G+++ A+R FDS++ K+++ W ++
Sbjct: 326 MFSKC-------------------------------GDIDAAKRIFDSMSYKDLISWNSM 354
Query: 363 FSGY-VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+G + EAL + + D + + +L AC+ + GK++ I +
Sbjct: 355 VNGLALHGLGREALAQF--HLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEAL 412
Query: 422 -GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
GV++ + +VD+ + G + A + FI VM
Sbjct: 413 YGVRLKSEHYGCMVDLLCRAGLLAEA----REFIR-------VM---------------- 445
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH-YACMIDLY 539
++PD + ++L A R ++E+GE+ + ++ P D Y + ++Y
Sbjct: 446 -------PLQPDGAIWGSMLGACRVYNNLELGEEAARCL---LELEPTNDGVYILLSNIY 495
Query: 540 GRA---NQLEKAIEFM 552
R N+++K E M
Sbjct: 496 ARRKMWNEVKKVRELM 511
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 119/264 (45%), Gaps = 19/264 (7%)
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLL 379
K + + S+ S+ VGY A F +V+ W ++ +V +
Sbjct: 15 KLIAHVLSMGSLGVGY--------AYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSY 66
Query: 380 SEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
+E + + V D LL CAL GK +H +++ + D + +TL++MY+
Sbjct: 67 TEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAA 126
Query: 440 CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
CG++ A +F+ R+ V++ MI+ Y + +A+LL+++M E G PD VT +
Sbjct: 127 CGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATL 186
Query: 500 LSAFRHCGSVEMGEKYFNSMT-ADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE 558
+SA + +G K + + D KI + ++++Y + L+ A + + +
Sbjct: 187 VSACAELKDLGVGMKLHSHIREMDMKICAVLG--SALVNMYAKCGDLKTARQVFDQLSDK 244
Query: 559 E----DAVILGSFLNVCRLNRNAE 578
+ A+I G N NR+ E
Sbjct: 245 DVYAWSALIFGYVKN----NRSTE 264
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 173/624 (27%), Positives = 309/624 (49%), Gaps = 72/624 (11%)
Query: 38 HNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGY 97
H L ++R+L D + V +A + + A S+F+ + YN M+ G
Sbjct: 41 HAHLLKTRRLLDPIITEAVLES----AALLLPDTIDYALSIFNHIDKPESSAYNVMIRGL 96
Query: 98 INAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSND 157
+ +AL LF +M ++ ++ D+FT +S L C ++ + G Q+HA ++K+
Sbjct: 97 AFKRSPD-NALLLFKKMH--EKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSGFK 153
Query: 158 ASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWR 217
++ F ++LI MY+ C A VF+G E
Sbjct: 154 SNEFVENTLIQMYANCGQIGVARHVFDGMPER---------------------------- 185
Query: 218 QPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKC 277
V+WN+++SGY +NG +E +KLF ++ E + +++ T S L AC L N++
Sbjct: 186 -----SIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEI 240
Query: 278 AKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSL 337
+ I +++ GL N +++ ++D+Y KC
Sbjct: 241 GELIGEYIVSKGLRRNNTLTTSLIDMYAKC------------------------------ 270
Query: 338 QGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVI 397
G ++ AR+ FD + +++VV W+A+ SGY +A C+ +L E + K V + + +V
Sbjct: 271 -GQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHE-MQKGNVYPNEVTMVS 328
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD 457
+L +CA+ A GK +H YI + +++ L + L+D Y+KCG + + +F+ ++
Sbjct: 329 VLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKN 388
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFN 517
+ + +I A++G + A+ F MLE +KP+ VTF+ +LSA H V+ G FN
Sbjct: 389 VFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFN 448
Query: 518 SMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNA 577
SM D+ I P +HY CM+D+ GRA LE+A +F+ ++P +AV+ + L CR ++N
Sbjct: 449 SMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNI 508
Query: 578 ELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYV 637
E+A ++ E + RLE + Y+ L+N YA G + R+R ++ + + GCS + +
Sbjct: 509 EMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPGCSLIEL 568
Query: 638 EHEIHIFTVGDVSHPKTNAIYSVL 661
+ +H F D H + I+ L
Sbjct: 569 DGVVHEFFSEDGEHKHSKEIHDAL 592
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 124/561 (22%), Positives = 211/561 (37%), Gaps = 136/561 (24%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L+E H +K+G N LI +Y+ + +R +FD MPER++ +W
Sbjct: 137 LREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAW------ 190
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
NSML GY G + +KLF ++ + I D+
Sbjct: 191 -------------------------NSMLSGY-TKNGLWDEVVKLFRKI--LELRIEFDD 222
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
T+ S L C +L N+ G + ++V + +SLIDMY+KC
Sbjct: 223 VTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKC------------ 270
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
G+++ A K F + + D V+W+ +ISGY Q +E L
Sbjct: 271 --------------------GQVDTARKLF-DEMDKRDVVAWSAMISGYAQADRCKEALN 309
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
LF M + V NE T S L +C L + K +H ++ K + + + ++D Y
Sbjct: 310 LFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYA 369
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
KC G ++ + F ++ KNV WTAL G
Sbjct: 370 KC-------------------------------GYIDRSVEVFKEMSFKNVFTWTALIQG 398
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
+ + S + + V + + + +L AC+ HA ++ G
Sbjct: 399 LANNGEGKMALEFFSSMLEND-VKPNDVTFIGVLSACS-----------HACLVDQG--- 443
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
+ L +++ + IE + Y M+ G E+A + M
Sbjct: 444 -RHLFNSMRRDFD---------------IEPRIEHYGCMVDILGRAGFLEEAYQFIDNM- 486
Query: 486 EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISP-ETDHYACMIDLYGRANQ 544
P+AV + +L++ R ++EM EK +T ++ P + Y + + Y +
Sbjct: 487 --PFPPNAVVWRTLLASCRAHKNIEMAEKSLEHIT---RLEPAHSGDYILLSNTYALVGR 541
Query: 545 LEKAIEFMKSIPTEEDAVILG 565
+E AI I +E I G
Sbjct: 542 VEDAIRVRSLIKEKEIKKIPG 562
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 168/556 (30%), Positives = 296/556 (53%), Gaps = 9/556 (1%)
Query: 119 EHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEE 178
+ I D + + + C L + G+Q+H F + + +SSL+ MY + ++
Sbjct: 68 QGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHMYVQFDHLKD 127
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN---DAVSWNTLISGYV 235
A VF+ + +++ +A+++ R+G ++ + F++ +L + VSWN +ISG+
Sbjct: 128 ARNVFDKLPQP-GVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFN 186
Query: 236 QNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF 295
++G + + +F M G++ + + +S L A L +IH +V+K GL + F
Sbjct: 187 RSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKF 246
Query: 296 VSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT--E 353
V S ++D+Y KC + + + + ++++ G S G ++ A F +
Sbjct: 247 VVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMD 306
Query: 354 KNVVVWTALFSGYVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
NVV WT++ + + ++ EAL +L E + EGV +++ + LL AC AAL GK
Sbjct: 307 LNVVSWTSMIASCSQNGKDMEAL-ELFRE-MQIEGVKPNSVTIPCLLPACGNIAALLHGK 364
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
H + LR G+ D + S L+DMY+KCG M + + F R+LV +N ++A YA HG
Sbjct: 365 AAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHG 424
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
+AI +FE M G KPD V+F +LSA G E G YF+SM+ ++ + +HY
Sbjct: 425 KTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEARMEHY 484
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
+CM+ L GR+ +LE+A +K +P E D+ + G+ L+ CR++ +L A +++ LE
Sbjct: 485 SCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRVDLGEIAAKRVFELEP 544
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
N Y+ L+N+YA++ W E+ +R MR + G SW+ +++++H+ GD SHP
Sbjct: 545 RNPGNYILLSNIYASKAMWVEVDMVRDMMRSRGLKKNPGYSWIEIKNKVHMLLAGDSSHP 604
Query: 653 KTNAIYSVLAIFTGEL 668
+ I LA T E+
Sbjct: 605 QMPQIIEKLAKLTVEM 620
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 135/508 (26%), Positives = 235/508 (46%), Gaps = 78/508 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A+ +GL L ++ + L+H+Y + + L+++R +FD++P+ V + + +IS + +
Sbjct: 97 HCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRV 156
Query: 73 KQARSLF----DSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
K+ + LF D +LV++N M+ G+ N G DA+ +F M E ++ D +V
Sbjct: 157 KETKELFYQTRDLGVELNLVSWNGMISGF-NRSGSYLDAVLMFQNMHL--EGLKPDGTSV 213
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE 188
+S L L G Q+H +++K F VS+LIDMY KC C E VF +
Sbjct: 214 SSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNE-MD 272
Query: 189 EVNLISKNAMVAACCREGEMEMALKTF--WRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
EV++ + NA+V R G ++ AL+ F ++ +LN VSW ++I+ QNG E L+L
Sbjct: 273 EVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLN-VVSWTSMIASCSQNGKDMEALEL 331
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
F M GV+ N T L AC + + K H + L+NG+ ++ +V S ++D+Y K
Sbjct: 332 FREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAK 391
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
C G M +R FD + +N+V W +L +GY
Sbjct: 392 C-------------------------------GRMLASRLCFDMMPNRNLVSWNSLMAGY 420
Query: 367 -VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
+ + EA+ + E + + G D + +L AC Q L
Sbjct: 421 AMHGKTFEAIN--IFELMQRCGQKPDHVSFTCVLSACT-QGGL----------------- 460
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
++ G + + + +E + Y+ M+ G E+A + ++M
Sbjct: 461 ------------TEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQM- 507
Query: 486 EKGIKPDAVTFVAILSAFRHCGSVEMGE 513
+PD+ + A+LS+ R V++GE
Sbjct: 508 --PFEPDSCVWGALLSSCRVHNRVDLGE 533
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 145/307 (47%), Gaps = 49/307 (15%)
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
+++F M G+ + + + C L ++ K++H + L +GL + V S ++ +
Sbjct: 59 IRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHM 118
Query: 304 YCKCENMNYAESM---LLLKGVRNSFSISSMIVGYSLQGNMEEARRHF----DSLTEKNV 356
Y + +++ A ++ L GV S S++I ++ +G ++E + F D E N+
Sbjct: 119 YVQFDHLKDARNVFDKLPQPGVVTS---SALISRFARKGRVKETKELFYQTRDLGVELNL 175
Query: 357 VVWTALFSGYVKAQN-CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIH 415
V W + SG+ ++ + +A+ L+ + + EG+ D + +L A G +IH
Sbjct: 176 VSWNGMISGFNRSGSYLDAV--LMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIH 233
Query: 416 AYILRMGVQMDKKLISTLVDMYSKC-------------------------------GNMT 444
Y+++ G+ DK ++S L+DMY KC G +
Sbjct: 234 CYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVD 293
Query: 445 YAEIIFQNFIERDL--VLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
A +F+ F DL V + MIA + +G + +A+ LF EM +G+KP++VT +L A
Sbjct: 294 NALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPA 353
Query: 503 FRHCGSV 509
CG++
Sbjct: 354 ---CGNI 357
>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 637
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 174/551 (31%), Positives = 272/551 (49%), Gaps = 71/551 (12%)
Query: 124 DEFTVTST------LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYE 177
DEF V L LC + V + H ++ + LI+ YSKC E
Sbjct: 56 DEFNVVQASDFIEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVE 115
Query: 178 EACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQN 237
A +VF+G E VSWNT+I Y +N
Sbjct: 116 LARQVFDGMLER---------------------------------SLVSWNTMIGLYTRN 142
Query: 238 GDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVS 297
E L +F M G +++E T +S LSAC + K++H +K L N +V
Sbjct: 143 RMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKKLHCLSMKTSLDLNLYVG 202
Query: 298 SGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVV 357
+ ++D+Y KC G + +A + F+S+ +K+ V
Sbjct: 203 TALLDLYAKC-------------------------------GMINDAVQVFESMQDKSSV 231
Query: 358 VWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
W+++ +GYV+++N E LL + + + L ++ AC+ AAL GK++HA
Sbjct: 232 TWSSMVAGYVQSKNYEEAL-LLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAV 290
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
I + G + + S+ VDMY+KCG++ + IIF E+++ L+N +I+ +A H ++
Sbjct: 291 IRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEV 350
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID 537
++LFE+M + G+ P+ VTF ++LS H G VE G ++F M Y +SP HY+CM+D
Sbjct: 351 MILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVD 410
Query: 538 LYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKAR 597
+ GRA L +A E +KSIP E A I GS L CR+ +N ELA A +KL LE N
Sbjct: 411 ILGRAGLLSEAYELIKSIPFEPTASIWGSLLASCRVCKNLELAEVAAKKLFELEPENAGN 470
Query: 598 YVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
+V L+N+YAA W E+ + RK +R + G SW+ ++ ++HIF VG+ SHP+ I
Sbjct: 471 HVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGQSWIDIKDKVHIFRVGESSHPRIREI 530
Query: 658 YSVLAIFTGEL 668
++L EL
Sbjct: 531 CTMLDNLVIEL 541
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 195/441 (44%), Gaps = 102/441 (23%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACI 67
EA CH + ++ L +N LI+ YSK + +R++FD M ER++ SWNT+I
Sbjct: 81 EAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIG--- 137
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFT 127
L T N M E++AL +F EM+ +E + EFT
Sbjct: 138 -------------------LYTRNRM----------ESEALDIFWEMR--NEGFKFSEFT 166
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
++S L+ C + ++LH +KTS D + + ++L+D+Y+KC +A +VFE
Sbjct: 167 ISSVLSACGANCDALECKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQ 226
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
++ +V+W+++++GYVQ+ + EE L L+
Sbjct: 227 DK---------------------------------SSVTWSSMVAGYVQSKNYEEALLLY 253
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
R + N+ T +S + AC L + K++H+ + K+G SN FV+S VD+Y KC
Sbjct: 254 RRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKC 313
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
G++ E+ F + EKN+ +W + SG+
Sbjct: 314 -------------------------------GSLRESYIIFSEVQEKNIELWNTIISGFA 342
Query: 368 KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDK 427
K + + +L E + ++G+ + + LL C + G+ ++R +
Sbjct: 343 KHARPKEVM-ILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFK-LMRTTYGLSP 400
Query: 428 KLI--STLVDMYSKCGNMTYA 446
++ S +VD+ + G ++ A
Sbjct: 401 NVVHYSCMVDILGRAGLLSEA 421
>gi|357160830|ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Brachypodium distachyon]
Length = 631
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 168/550 (30%), Positives = 271/550 (49%), Gaps = 65/550 (11%)
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
+D ++ L LC K ++ G+ H + + LI++Y+KC + A V
Sbjct: 55 IDVSAISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLV 114
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
F+ + VSWNT+I+GY +G+ +
Sbjct: 115 FD---------------------------------IMHVRSIVSWNTMIAGYTHSGEDVQ 141
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
LKLF RM G +E T +S + AC + K++H+ LK L SN FV + I+D
Sbjct: 142 ALKLFSRMHREGTHMSEFTLSSTICACAAKYAINECKQLHTIALKLALDSNSFVGTAILD 201
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
VY KC NM +++A F+ + E+ +V W++L
Sbjct: 202 VYAKC-NM------------------------------IKDACWVFEKMPERTLVTWSSL 230
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
F+GYV+ E L +EGV L +L ACA A G ++HA IL+ G
Sbjct: 231 FAGYVQNGLHEEALHLF-RCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCG 289
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
+ + ++LVD+Y++CG + A +F +++V++N MIA ++ H H +A++LFE
Sbjct: 290 FHGNFFVAASLVDVYARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFE 349
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRA 542
+M + GI P+ VT++++LS H G VE G YF+ + +D + P HY+CM+D+ GR+
Sbjct: 350 KMQQLGIFPNEVTYLSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRS 409
Query: 543 NQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLA 602
+ ++A E + +P E A + GS L CR N LA A E+L +LE +N +V L+
Sbjct: 410 GKTDEAWELLNKMPFEPTASMWGSLLGSCRNYNNIRLARIAAEQLFQLEPDNGGNHVLLS 469
Query: 603 NVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLA 662
NVYAA GNW + RK ++ + G SW+ + ++H+F VG+ HP+ IY+ L
Sbjct: 470 NVYAASGNWENVLMARKYLKDSGAKKEMGRSWIEAKGKVHVFVVGERKHPRITDIYNKLE 529
Query: 663 IFTGELYEIA 672
E+ + A
Sbjct: 530 EIYHEMRKFA 539
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 191/434 (44%), Gaps = 106/434 (24%)
Query: 12 CHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHD 71
CH AI GL T+T N LI++Y+K +R +FD M R++
Sbjct: 79 CHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFDIMHVRSI--------------- 123
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
V++N+M+ GY ++ G + ALKLF M H M EFT++ST
Sbjct: 124 ----------------VSWNTMIAGYTHS-GEDVQALKLFSRMHREGTH--MSEFTLSST 164
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
+ C + +QLH +K + D++ F ++++D+Y+KC ++AC VFE
Sbjct: 165 ICACAAKYAINECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFE------- 217
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
+ PE V+W++L +GYVQNG EE L LF
Sbjct: 218 -------------------------KMPE-RTLVTWSSLFAGYVQNGLHEEALHLFRCAQ 251
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
GV E T ++ LSAC L ++H+ +LK G N FV++ +VDVY +C
Sbjct: 252 REGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVAASLVDVYARC---- 307
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK-AQ 370
G +E+A F + KNVV+W A+ + + + A
Sbjct: 308 ---------------------------GQIEKAYALFAYMEHKNVVIWNAMIASFSRHAH 340
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG---VQMDK 427
+ EA+ +L E + + G+ + + + +L C+ + G+ H + L M V+ +
Sbjct: 341 SWEAM--ILFEKMQQLGIFPNEVTYLSVLSVCSHAGLVEKGR--HYFSLLMSDRTVEPNV 396
Query: 428 KLISTLVDMYSKCG 441
S +VD+ + G
Sbjct: 397 LHYSCMVDVLGRSG 410
>gi|356533824|ref|XP_003535458.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 630
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 189/681 (27%), Positives = 326/681 (47%), Gaps = 113/681 (16%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
+RS L + H Q + G +L+ Y+ L SR +F+ + ++V+ WN
Sbjct: 41 LRSQKLAQQ--SHAQILANGFAQNAFLATRLVSAYATCGELATSRFVFESVEAKSVYLWN 98
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
++I+ +K+HD +QA +LF + N ML
Sbjct: 99 SLINGYVKNHDFRQALALFRE------MGRNGML-------------------------- 126
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
D++T+ + + +L ++ G+ +H ++ + +SL+ MY +C + +A
Sbjct: 127 --PDDYTLATVFKVFGELEDLVSGKLIHGKGIRIGFVSDVVVGNSLMSMYCRCGEFGDAV 184
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALK--TFWRQPELNDAVSWNTLISGYVQNG 238
+VF+ T N+ S N +++ C AL+ F +L++
Sbjct: 185 KVFDE-TPHRNVGSFNVVISGCA-------ALENCNFTSHDDLSN--------------- 221
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCG-LRNVKCAKEIHSWVLKNGL----ISN 293
F+RM G + + T AS L CCG +E+H +V+KNGL S+
Sbjct: 222 -------FFLRMQCEGFKADAFTVASLLPVCCGDTGKWDYGRELHCYVVKNGLDLKMDSD 274
Query: 294 PFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
+ S ++D+Y + + +++G RR FD +
Sbjct: 275 VHLGSSLIDMYSRSKK---------------------VVLG----------RRVFDQMKN 303
Query: 354 KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
+NV VWTA+ +GYV+ + LL K+G+ + + L+ L AC L A L GK+
Sbjct: 304 RNVYVWTAMINGYVQNGAPDDALVLLRAMQMKDGIRPNKVSLISALPACGLLAGLIGGKQ 363
Query: 414 IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQ-NFIERDLVLYNVMIACYAHHG 472
IH + ++M + D L + L+DMYSKCG++ YA F+ + +D + ++ MI+ Y HG
Sbjct: 364 IHGFSIKMELNDDVSLCNALIDMYSKCGSLDYARRAFETSSYFKDAITWSSMISAYGLHG 423
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
E+AI+ + +ML++G KPD +T V +LSA G V+ G + S+ Y+I P +
Sbjct: 424 RGEEAIIAYYKMLQQGFKPDMITVVGVLSACSKSGLVDEGISIYKSLMTKYEIKPTVEIC 483
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
AC++D+ GR+ QL++A+EF+K +P + + GS L ++ N+ A LL LE
Sbjct: 484 ACVVDMLGRSGQLDQALEFIKEMPLDPGPSVWGSLLTASVIHGNSRTRDLAYRHLLELEP 543
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVS 650
N + Y+ L+N YA++ W + +R M RG+K + GCSW+ + + H F+V D +
Sbjct: 544 ENPSNYISLSNTYASDRRWDVVTEVRTIMKERGLK--KVPGCSWITISGKTHSFSVADKA 601
Query: 651 HPKTNAIYSVLAIFTGELYEI 671
HP ++ IY +L G+L I
Sbjct: 602 HPSSSLIYEML----GDLVSI 618
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 110/470 (23%), Positives = 196/470 (41%), Gaps = 79/470 (16%)
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L LC+ L + +Q HA ++ + F + L+ Y+ C + VFE
Sbjct: 35 LQLCIDLRSQKLAQQSHAQILANGFAQNAFLATRLVSAYATCGELATSRFVFESV----- 89
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
E WN+LI+GYV+N D + L LF MG
Sbjct: 90 ----------------------------EAKSVYLWNSLINGYVKNHDFRQALALFREMG 121
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
NG+ +++T A+ L ++ K IH ++ G +S+ V + ++ +YC+C
Sbjct: 122 RNGMLPDDYTLATVFKVFGELEDLVSGKLIHGKGIRIGFVSDVVVGNSLMSMYCRC---- 177
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
G +A + FD +NV + + SG +N
Sbjct: 178 ---------------------------GEFGDAVKVFDETPHRNVGSFNVVISGCAALEN 210
Query: 372 CE-ALFDLLSEFVTK---EGVVTDALILVILLGACALQAA-LHPGKEIHAYILRMGVQM- 425
C D LS F + EG DA + LL C G+E+H Y+++ G+ +
Sbjct: 211 CNFTSHDDLSNFFLRMQCEGFKADAFTVASLLPVCCGDTGKWDYGRELHCYVVKNGLDLK 270
Query: 426 ---DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
D L S+L+DMYS+ + +F R++ ++ MI Y +G + A++L
Sbjct: 271 MDSDVHLGSSLIDMYSRSKKVVLGRRVFDQMKNRNVYVWTAMINGYVQNGAPDDALVLLR 330
Query: 483 EM-LEKGIKPDAVTFVAILSAFRHCGSVE--MGEKYFNSMTADYKISPETDHYACMIDLY 539
M ++ GI+P+ V+ ++ L A CG + +G K + + +++ + +ID+Y
Sbjct: 331 AMQMKDGIRPNKVSLISALPA---CGLLAGLIGGKQIHGFSIKMELNDDVSLCNALIDMY 387
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLR 589
+ L+ A ++ +DA+ S ++ L+ E A A K+L+
Sbjct: 388 SKCGSLDYARRAFETSSYFKDAITWSSMISAYGLHGRGEEAIIAYYKMLQ 437
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%)
Query: 395 LVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFI 454
L+ LL C + ++ HA IL G + L + LV Y+ CG + + +F++
Sbjct: 31 LLHLLQLCIDLRSQKLAQQSHAQILANGFAQNAFLATRLVSAYATCGELATSRFVFESVE 90
Query: 455 ERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAF 503
+ + L+N +I Y + +A+ LF EM G+ PD T + F
Sbjct: 91 AKSVYLWNSLINGYVKNHDFRQALALFREMGRNGMLPDDYTLATVFKVF 139
>gi|242084152|ref|XP_002442501.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
gi|241943194|gb|EES16339.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
Length = 701
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 203/648 (31%), Positives = 309/648 (47%), Gaps = 72/648 (11%)
Query: 25 TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP- 83
++ N +I S H + ++R LFD MP R+ FSW ++S ++ +L+ AR + D P
Sbjct: 80 AVSWNAMIAALSDHGRVADARGLFDRMPSRDDFSWTVMVSCYARAGELELARDVLDRMPG 139
Query: 84 HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGF 143
K YN+M+ GY G DA+KL EM + D + V+ + F
Sbjct: 140 DKCTACYNAMISGYAK-NGRFDDAVKLLREMPAPDLFSWNSALAGLTQSGQMVRAVQF-F 197
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
+ MV + GF + +D A F G E N++S ++ C
Sbjct: 198 DEMVEKDMVSWNLMLEGFVRAGDLD----------AAASFFGRIESPNVVSWVTLLNGYC 247
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM-GENGVRWNEHTF 262
R G + A F R PE N V+ N ++ GYV+ EE KLF M G+N + W T
Sbjct: 248 RAGRISDARDLFDRMPERN-VVACNVMLDGYVRLSRLEEACKLFDEMPGKNSISWT--TI 304
Query: 263 ASALSACCGLRNVK-----------CAK-----------------------EIHSWVLKN 288
S L+ L+ K AK E+H V N
Sbjct: 305 ISGLARAGKLQEAKDLLDKMSFNCVAAKTALMHGYLQRNMVNDARQIFDGMEVHDTVCWN 364
Query: 289 GLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSIS--SMIVGYSLQGNMEEARR 346
+IS +V G+++ E+MLL + + N ++S +MI GY+ G M +A
Sbjct: 365 TMISG-YVQRGMLE-----------EAMLLFQRMPNKDTVSWNTMIAGYAQGGQMRKAIG 412
Query: 347 HFDSLTEKNVVVWTALFSGYVKAQNCEALF-DLLSEF-VTKEGV-VTDALILVILLGACA 403
F ++ KN V W ++ SG+V+ LF D F + + G D L ACA
Sbjct: 413 IFRRMSRKNTVSWNSVISGFVQ----NGLFVDAFHHFMLMRRGTNRADWSTYASCLRACA 468
Query: 404 LQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNV 463
AALH G+++H+ ++R G D + L+ Y+KCG M A+ IF + +D+V +N
Sbjct: 469 NLAALHVGRQLHSLLVRSGHINDLFARNALISTYAKCGRMLEAKQIFDEMVGKDIVSWNA 528
Query: 464 MIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADY 523
++ YA +G +AI +F EM G++PD VTFV ILSA G ++ G +FNSMT +Y
Sbjct: 529 LVDGYASNGQGTEAISVFREMEANGVRPDEVTFVGILSACSRAGLIDEGLGFFNSMTEEY 588
Query: 524 KISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEA 583
+ P +HYACM DL GRA +L +A E ++ + + +A + G+ L C++ +N ELA A
Sbjct: 589 SLKPVAEHYACMADLLGRAGKLNEAFELVQGMQIQPNAGVWGALLGACQMYKNHELARLA 648
Query: 584 EEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAG 631
EKL LE + YV L+N+ A G W E + R ++ N+ G
Sbjct: 649 AEKLSELEPCRASNYVLLSNISAEAGKWDEAEKARASIKEKGANKPPG 696
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 79/197 (40%), Gaps = 47/197 (23%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +++G N LI Y+K + E++++FDEM +++ SWN ++
Sbjct: 480 HSLLVRSGHINDLFARNALISTYAKCGRMLEAKQIFDEMVGKDIVSWNALVD-------- 531
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYI-NAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
GY N +G E A+ +F EM++ +R DE T
Sbjct: 532 -----------------------GYASNGQGTE--AISVFREMEA--NGVRPDEVTFVGI 564
Query: 132 LNLCVK--LLNVGFGRQLHAFMVKTSNDASGFAVSS----LIDMYSKCRCYEEACRVFEG 185
L+ C + L++ G G F + + S V+ + D+ + EA + +G
Sbjct: 565 LSACSRAGLIDEGLG-----FFNSMTEEYSLKPVAEHYACMADLLGRAGKLNEAFELVQG 619
Query: 186 CTEEVNLISKNAMVAAC 202
+ N A++ AC
Sbjct: 620 MQIQPNAGVWGALLGAC 636
>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Brachypodium distachyon]
Length = 849
Score = 278 bits (710), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 188/651 (28%), Positives = 300/651 (46%), Gaps = 102/651 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPE---RNVFSWNTIISACIKS 69
H A+K+G +N L+ +Y+K + ++ F E P RNV SWN
Sbjct: 188 HGLAVKSGWDAAPRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNV-------- 239
Query: 70 HDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVT 129
ML GY G A L EMQ + + DE T+
Sbjct: 240 -----------------------MLGGYAR-NGEAGAAFGLLREMQMEERGVPADEITML 275
Query: 130 STLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVS-SLIDMYSKCRCYEEACRVFEG-CT 187
S L +C L + R+LHAF+V+ +G V +LI Y +C C ACRVF+G C+
Sbjct: 276 SVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCGCLLHACRVFDGICS 335
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
+ V+ SWN LI + QNG+A ++LF
Sbjct: 336 KMVS----------------------------------SWNALIGAHAQNGEASAAIELF 361
Query: 248 VRMGEN-GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
M G + + + S L AC L+++ K H ++L+NGL + F+ ++ VY +
Sbjct: 362 REMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQ 421
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
C + A + ++ S ++MI GYS G E+ + F + K W +L +
Sbjct: 422 CGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLA-- 479
Query: 367 VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMD 426
T AL+ AC+ A+ GKE+H + L+ + D
Sbjct: 480 ----------------------ATSALV------ACSELPAVRLGKEMHCFALKADLCED 511
Query: 427 KKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
L S+++DMYSKCG++ A + F +D V + VMI YA +G ++A+ L+++M
Sbjct: 512 SFLSSSIIDMYSKCGSVDDARVFFDRLKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGR 571
Query: 487 KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLE 546
+G++PD T++ +L A H G +E G +F M KI + +HYAC+I + RA +
Sbjct: 572 EGMEPDGFTYLGLLMACGHAGMLEDGLCFFQEMRNLPKIEAKLEHYACVIGMLSRAGRFA 631
Query: 547 KAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYA 606
A+ M+ +P E DA IL S L+ C ++ EL + +KLL LE + YV +N+YA
Sbjct: 632 DAVALMEVMPEEPDAKILSSVLSACHMHGEVELGKKVADKLLELEPHKAEHYVLASNMYA 691
Query: 607 AEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
W EM ++RK +R + GCSW+ + +++ F G+ S P+ + +
Sbjct: 692 GSRQWDEMRKVRKMLRDAGVAKEPGCSWIDIAGKVYSFVAGENSLPEMHKV 742
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 179/431 (41%), Gaps = 79/431 (18%)
Query: 87 LVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQ 146
L +N +L A G ADAL + + +A + + D FT+ L C GRQ
Sbjct: 30 LPQWNGLLADLSRA-GRHADALAILPRLLAASDGVAPDRFTLPPALKSC----RGDDGRQ 84
Query: 147 LHAFMVKTS-NDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
+HA K D F +SL+ MY +C ++A +VFEG NL+S NA++AA
Sbjct: 85 VHAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGR-NLVSWNALMAAV--- 140
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGEN---GVRWNEHTF 262
D GL+LF E+ +E T
Sbjct: 141 --------------------------------ADPRRGLELFRDCLEDLGGTAAPDEATL 168
Query: 263 ASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGV 322
+ L C L + + +H +K+G + P VS+ +VD+Y KC M AE L
Sbjct: 169 VTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNVLVDMYAKCGEMADAECAFL---- 224
Query: 323 RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF 382
+NVV W + GY + A F LL E
Sbjct: 225 ------------------------EAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREM 260
Query: 383 VTKE-GVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS-TLVDMYSKC 440
+E GV D + ++ +L C+ L +E+HA+++R G+ + ++ L+ Y +C
Sbjct: 261 QMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRC 320
Query: 441 GNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK-GIKPDAVTFVAI 499
G + +A +F + + +N +I +A +G AI LF EM G KPD + ++
Sbjct: 321 GCLLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSL 380
Query: 500 LSAFRHCGSVE 510
L A CG+++
Sbjct: 381 LLA---CGNLK 388
>gi|449521571|ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Cucumis sativus]
Length = 817
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 180/594 (30%), Positives = 300/594 (50%), Gaps = 71/594 (11%)
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIE-MQSADEHIRMDEFTVTS 130
L+ A+ +FD+ ++ +N+M+ ++ + + ++LF + ++S D I DE T+ S
Sbjct: 263 LEFAKKVFDNCLERNTEVWNTMISAFVQ-NNFSLEGIQLFFQAVESEDAAI--DEVTLLS 319
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
++ L QLHAF++K +++LI MYS+C
Sbjct: 320 AISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRC----------------- 362
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
++ + K F PE D VSWNT+IS +VQNG +E L LF M
Sbjct: 363 ---------------NSIDTSFKIFDNMPE-KDVVSWNTMISAFVQNGLNDEALMLFYEM 406
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
+ + + T + LSA LRN K+ H ++L+NG I + S ++D+Y K
Sbjct: 407 KKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNG-IQFEGMDSYLIDMYAKSG-- 463
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
L++ +N F E++ H E++ W ++ SGY +
Sbjct: 464 -------LIEAAQNVF---------------EKSFSH-----ERDQATWNSMMSGYTQNG 496
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
+ F +L + + ++ V+ + + L +L AC + GK++H + +R + + +
Sbjct: 497 LVDQAFLILRQMLDQK-VMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVA 555
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+ L+DMYSK G++ +AE +F E+ +V Y+ MI Y HG E A+ +F M + GI+
Sbjct: 556 TALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQ 615
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
PDAVT VA+LSA + G V+ G + F SM Y I P T+H+ C+ D+ GRA +++KA E
Sbjct: 616 PDAVTLVAVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFCCVADMLGRAGRVDKAYE 675
Query: 551 FMKSIPTEEDAV-ILGSFLNVCRLNRNAELAGEAEEKLLRLEG-NNKARY-VQLANVYAA 607
F+ + + + + I GS L CR+++ EL +KLL +E N K Y V L+N+YA
Sbjct: 676 FVIGLGEKGNVMEIWGSLLAACRIHKQFELGKLVAKKLLEMEKINGKTGYHVLLSNIYAE 735
Query: 608 EGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
E NW + +RKQMR + G SW+ + ++ F D HP+++ IYS+L
Sbjct: 736 ERNWENVDIVRKQMRERGLKKETGSSWIEIAGYMNHFASKDRKHPQSDQIYSML 789
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/499 (24%), Positives = 226/499 (45%), Gaps = 53/499 (10%)
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
L AR LFD+ P V +N+++ G + + +AL + M+S+ ++ D +T +S
Sbjct: 44 LHLARQLFDALPRPSTVLWNTIIIGLV-CNNFPDEALLFYSNMKSSSPQVKCDSYTYSSV 102
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L C N+ G+ +HA ++ + S +SL++MYS C +
Sbjct: 103 LKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCS----------------S 146
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
MV+ R + T ++ V+WNTLI+ YV+ E +K F M
Sbjct: 147 TTPDGKMVSGYSRCDLVRKVFDTMRKR----TVVAWNTLIAWYVRTERYAEAVKQFSMMM 202
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
+ G++ + +F + A L + K A +H ++K G S + D+Y
Sbjct: 203 KIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLG-------SEYVNDLYV------ 249
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
+SS I Y+ G +E A++ FD+ E+N VW + S +V+
Sbjct: 250 ----------------VSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQNNF 293
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
L + V E D + L+ + A + +++HA++++ +++
Sbjct: 294 SLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMN 353
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
L+ MYS+C ++ + IF N E+D+V +N MI+ + +G ++A++LF EM ++ +
Sbjct: 354 ALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMV 413
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE- 550
D+VT A+LSA + ++G++ + + D Y +ID+Y ++ +E A
Sbjct: 414 DSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSY--LIDMYAKSGLIEAAQNV 471
Query: 551 FMKSIPTEEDAVILGSFLN 569
F KS E D S ++
Sbjct: 472 FEKSFSHERDQATWNSMMS 490
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 185/447 (41%), Gaps = 101/447 (22%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
++ L E L H IK N LI +YS+ N + S K+FD MPE++V SWN
Sbjct: 327 LQKFELAEQL--HAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWN 384
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
T+ISA +++ G +AL LF EM+ D
Sbjct: 385 TMISAFVQN--------------------------------GLNDEALMLFYEMKKQD-- 410
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
+ +D TVT+ L+ L N G+Q H ++++ G S LIDMY+K E A
Sbjct: 411 LMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGMD-SYLIDMYAKSGLIEAAQ 469
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
VFE K+F + D +WN+++SGY QNG
Sbjct: 470 NVFE----------------------------KSFSHE---RDQATWNSMMSGYTQNGLV 498
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
++ + +M + V N T AS L AC + K++H + ++N L N FV++ +
Sbjct: 499 DQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATAL 558
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
+D+Y K ++ +AE++ ++ + S+MI+GY G E A F +
Sbjct: 559 IDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRM--------- 609
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
K G+ DA+ LV +L AC+ + G +I +
Sbjct: 610 -----------------------QKSGIQPDAVTLVAVLSACSYAGLVDEGLQIFESMRT 646
Query: 421 M-GVQMDKKLISTLVDMYSKCGNMTYA 446
+ +Q + + DM + G + A
Sbjct: 647 VYNIQPSTEHFCCVADMLGRAGRVDKA 673
>gi|449456661|ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Cucumis sativus]
Length = 793
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 180/594 (30%), Positives = 300/594 (50%), Gaps = 71/594 (11%)
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIE-MQSADEHIRMDEFTVTS 130
L+ A+ +FD+ ++ +N+M+ ++ + + ++LF + ++S D I DE T+ S
Sbjct: 239 LEFAKKVFDNCLERNTEVWNTMISAFVQ-NNFSLEGIQLFFQAVESEDAAI--DEVTLLS 295
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
++ L QLHAF++K +++LI MYS+C
Sbjct: 296 AISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRC----------------- 338
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
++ + K F PE D VSWNT+IS +VQNG +E L LF M
Sbjct: 339 ---------------NSIDTSFKIFDNMPE-KDVVSWNTMISAFVQNGLNDEALMLFYEM 382
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
+ + + T + LSA LRN K+ H ++L+NG I + S ++D+Y K
Sbjct: 383 KKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNG-IQFEGMDSYLIDMYAKSG-- 439
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
L++ +N F E++ H E++ W ++ SGY +
Sbjct: 440 -------LIEAAQNVF---------------EKSFSH-----ERDQATWNSMMSGYTQNG 472
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
+ F +L + + ++ V+ + + L +L AC + GK++H + +R + + +
Sbjct: 473 LVDQAFLILRQMLDQK-VMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVA 531
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+ L+DMYSK G++ +AE +F E+ +V Y+ MI Y HG E A+ +F M + GI+
Sbjct: 532 TALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQ 591
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
PDAVT VA+LSA + G V+ G + F SM Y I P T+H+ C+ D+ GRA +++KA E
Sbjct: 592 PDAVTLVAVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFCCVADMLGRAGRVDKAYE 651
Query: 551 FMKSIPTEEDAV-ILGSFLNVCRLNRNAELAGEAEEKLLRLEG-NNKARY-VQLANVYAA 607
F+ + + + + I GS L CR+++ EL +KLL +E N K Y V L+N+YA
Sbjct: 652 FVIGLGEKGNVMEIWGSLLAACRIHKQFELGKLVAKKLLEMEKINGKTGYHVLLSNIYAE 711
Query: 608 EGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
E NW + +RKQMR + G SW+ + ++ F D HP+++ IYS+L
Sbjct: 712 ERNWENVDIVRKQMRERGLKKETGSSWIEIAGYMNHFASKDRKHPQSDQIYSML 765
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/499 (24%), Positives = 226/499 (45%), Gaps = 53/499 (10%)
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
L AR LFD+ P V +N+++ G + + +AL + M+S+ ++ D +T +S
Sbjct: 20 LHLARQLFDALPRPSTVLWNTIIIGLV-CNNFPDEALLFYSNMKSSSPQVKCDSYTYSSV 78
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L C N+ G+ +HA ++ + S +SL++MYS C +
Sbjct: 79 LKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCS----------------S 122
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
MV+ R + T ++ V+WNTLI+ YV+ E +K F M
Sbjct: 123 TTPDGKMVSGYSRCDLVRKVFDTMRKRT----VVAWNTLIAWYVRTERYAEAVKQFSMMM 178
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
+ G++ + +F + A L + K A +H ++K G S + D+Y
Sbjct: 179 KIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLG-------SEYVNDLYV------ 225
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
+SS I Y+ G +E A++ FD+ E+N VW + S +V+
Sbjct: 226 ----------------VSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQNNF 269
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
L + V E D + L+ + A + +++HA++++ +++
Sbjct: 270 SLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMN 329
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
L+ MYS+C ++ + IF N E+D+V +N MI+ + +G ++A++LF EM ++ +
Sbjct: 330 ALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMV 389
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE- 550
D+VT A+LSA + ++G++ + + D Y +ID+Y ++ +E A
Sbjct: 390 DSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSY--LIDMYAKSGLIEAAQNV 447
Query: 551 FMKSIPTEEDAVILGSFLN 569
F KS E D S ++
Sbjct: 448 FEKSFSHERDQATWNSMMS 466
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 185/447 (41%), Gaps = 101/447 (22%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
++ L E L H IK N LI +YS+ N + S K+FD MPE++V SWN
Sbjct: 303 LQKFELAEQL--HAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWN 360
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
T+ISA +++ G +AL LF EM+ D
Sbjct: 361 TMISAFVQN--------------------------------GLNDEALMLFYEMKKQD-- 386
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
+ +D TVT+ L+ L N G+Q H ++++ G S LIDMY+K E A
Sbjct: 387 LMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGMD-SYLIDMYAKSGLIEAAQ 445
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
VFE K+F + D +WN+++SGY QNG
Sbjct: 446 NVFE----------------------------KSFSHE---RDQATWNSMMSGYTQNGLV 474
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
++ + +M + V N T AS L AC + K++H + ++N L N FV++ +
Sbjct: 475 DQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATAL 534
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
+D+Y K ++ +AE++ ++ + S+MI+GY G E A F +
Sbjct: 535 IDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRM--------- 585
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
K G+ DA+ LV +L AC+ + G +I +
Sbjct: 586 -----------------------QKSGIQPDAVTLVAVLSACSYAGLVDEGLQIFESMRT 622
Query: 421 M-GVQMDKKLISTLVDMYSKCGNMTYA 446
+ +Q + + DM + G + A
Sbjct: 623 VYNIQPSTEHFCCVADMLGRAGRVDKA 649
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 28/221 (12%)
Query: 338 QGNMEEARRHFDSLTEKNVVVWTALFSGYV-KAQNCEALFDLLSEFVTKEGVVTDALILV 396
+G + AR+ FD+L + V+W + G V EAL + + V D+
Sbjct: 17 EGQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYS 76
Query: 397 ILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT------------ 444
+L ACA L GK +HA+ LR + + + ++L++MYS C + T
Sbjct: 77 SVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRC 136
Query: 445 -YAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAF 503
+F +R +V +N +IA Y +A+ F M++ GIKP V+FV + AF
Sbjct: 137 DLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAF 196
Query: 504 RHCGS-----------VEMGEKYFNSMTADYKISPETDHYA 533
G V++G +Y N + Y +S YA
Sbjct: 197 SSLGDFKNANVVHGMLVKLGSEYVNDL---YVVSSAIFMYA 234
>gi|297729323|ref|NP_001177025.1| Os12g0577900 [Oryza sativa Japonica Group]
gi|255670427|dbj|BAH95753.1| Os12g0577900, partial [Oryza sativa Japonica Group]
Length = 614
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 181/559 (32%), Positives = 270/559 (48%), Gaps = 85/559 (15%)
Query: 102 GYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGF 161
G DAL F M R D FT S L + V R +H+ +VK + F
Sbjct: 112 GAPRDALAAFSAMP------RRDSFTY-SFLIKALSAAGVAPVRAVHSHVVKLGSVEDTF 164
Query: 162 AVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPEL 221
++LID YSK + +A +VF+ EM PE
Sbjct: 165 VGNALIDAYSKNGGFSDARKVFD------------------------EM--------PE- 191
Query: 222 NDAVSWNTLISGYVQNGDAEEGLKLFVRMGE-NGVRWNEHTFASALSACCGLRNVKCAKE 280
D VSWNT ++ V+ G+ KLF M E + V WN
Sbjct: 192 RDVVSWNTAMAAMVREGELAGVRKLFDEMPEKDTVSWNT--------------------- 230
Query: 281 IHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGN 340
I+D Y K + A + RN S S+M+ GY +G+
Sbjct: 231 -------------------ILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGD 271
Query: 341 MEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVT-DALILVILL 399
+E AR FD + KN+V WT + S + + L ++ KE V D +V +L
Sbjct: 272 LEMARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQM--KEASVELDVAAVVSIL 329
Query: 400 GACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQN-FIERDL 458
ACA +L GK IH Y+ + + + + L+DM+ KCG + A+ +F +++D
Sbjct: 330 AACAESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDS 389
Query: 459 VLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNS 518
V +N +I +A HGH +KA+ LF +M ++G PDAVT + +LSA H G V+ G ++F++
Sbjct: 390 VSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRHFSN 449
Query: 519 MTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAE 578
M DY I P+ +HY CMIDL GR +++A++ +KS+P E + VI GS L+ CRL++N E
Sbjct: 450 MERDYGIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVE 509
Query: 579 LAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVE 638
A A +L +L+ +N Y L+N+YA G W++M + R QM+G + AG SWV +
Sbjct: 510 YAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVELN 569
Query: 639 HEIHIFTVGDVSHPKTNAI 657
H FTVGD H ++ I
Sbjct: 570 ETFHEFTVGDRKHQDSDQI 588
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 131/286 (45%), Gaps = 31/286 (10%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K G T N LI YSK+ ++RK+FDEMPER+V SWNT ++A ++ +L
Sbjct: 151 HSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGEL 210
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSA--------------- 117
R LFD P KD V++N++L GY A EA A +LF M
Sbjct: 211 AGVRKLFDEMPEKDTVSWNTILDGYTKAGEVEA-AFELFQRMPERNVVSWSTMVSGYCKK 269
Query: 118 ----------DEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLI 167
D+ + T T ++ C + V +L A M + S + AV S++
Sbjct: 270 GDLEMARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSIL 329
Query: 168 DMYSKCRCYEEACRVFEGCTEEVNLISK----NAMVAACCREGEMEMALKTFWRQPELND 223
++ R+ + NL NA++ C+ G + A F + D
Sbjct: 330 AACAESGSLSLGKRIHR-YVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKD 388
Query: 224 AVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
+VSWN++I G+ +G ++ L+LF +M + G + T + LSAC
Sbjct: 389 SVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSAC 434
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 142/451 (31%), Positives = 247/451 (54%)
Query: 222 NDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEI 281
+ SWN++I+ ++GD+ E L+ F M + ++ N TF A+ +C L ++ ++
Sbjct: 39 TNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQA 98
Query: 282 HSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNM 341
H L G + FVSS +VD+Y KC + A ++ RN S +SMI GY +
Sbjct: 99 HQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDA 158
Query: 342 EEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGA 401
A R FD + E++V+ W ++ + Y + ++ V + +A+ L +L A
Sbjct: 159 HRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLA 218
Query: 402 CALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLY 461
CA + GK IH +++MG++ + + ++++DMY KCG + A F E+++ +
Sbjct: 219 CAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSW 278
Query: 462 NVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTA 521
+ M+A Y HGH ++A+ +F EM G+KP+ +TFV++L+A H G +E G +F +M+
Sbjct: 279 SAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSH 338
Query: 522 DYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAG 581
++ + P +HY CM+DL GRA L++A + +K + D V+ G+ L CR+++N +L
Sbjct: 339 EFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGE 398
Query: 582 EAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEI 641
+ KL L+ N YV L+N+YA G W ++ R+R M+ + G S V ++ +
Sbjct: 399 ISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRV 458
Query: 642 HIFTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
H+F VGD HP+ IY L + +L E+
Sbjct: 459 HVFLVGDREHPQHEKIYEYLEKLSMKLQEVG 489
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 130/510 (25%), Positives = 224/510 (43%), Gaps = 108/510 (21%)
Query: 47 LFDEMPER-NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEA 105
LF++ ++ NVFSWN++I+ +S D
Sbjct: 31 LFNKYVDKTNVFSWNSVIAELARSGD--------------------------------SV 58
Query: 106 DALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS 165
+AL+ F M+ ++ + T + C LL++ GRQ H + + F S+
Sbjct: 59 EALRAFSSMRKLS--LKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSA 116
Query: 166 LIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAV 225
L+DMYSKC +A +F+ + N++S +M+ + + AL+ F E D +
Sbjct: 117 LVDMYSKCGELRDARTLFDEISHR-NIVSWTSMITGYVQNDDAHRALRVFDGMAE-RDVI 174
Query: 226 SWNTLISGYVQNGDAEEGLKLFVRMGENG-VRWNEHTFASALSACCGLRNVKCAKEIHSW 284
SWN++I+ Y QNG + E +++F RM ++G + +N T ++ L AC + + K IH
Sbjct: 175 SWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQ 234
Query: 285 VLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEA 344
V+K GL SN FV + I+D+YCKC G +E A
Sbjct: 235 VIKMGLESNVFVGTSIIDMYCKC-------------------------------GKVEMA 263
Query: 345 RRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACAL 404
R+ FD + EKNV W+A+ +GY + + ++ E + GV + + V +L AC+
Sbjct: 264 RKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYE-MNMAGVKPNYITFVSVLAACS- 321
Query: 405 QAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVM 464
HA +L G K + S D +E + Y M
Sbjct: 322 ----------HAGLLEEGWHWFKAM-SHEFD------------------VEPGVEHYGCM 352
Query: 465 IACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYK 524
+ G+ ++A L + M ++PD V + A+L A R +V++GE S ++
Sbjct: 353 VDLLGRAGYLKEAFDLIKGM---KLRPDFVVWGALLGACRMHKNVDLGEI---SARKLFE 406
Query: 525 ISPET-DHYACMIDLYGRANQLEKAIEFMK 553
+ P+ +Y + ++Y A + E +E M+
Sbjct: 407 LDPKNCGYYVLLSNIYADAGRWED-VERMR 435
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 133/266 (50%), Gaps = 35/266 (13%)
Query: 4 LNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
L+L H QA+ G ++ L+ +YSK LR++R LFDE+ RN+ SW ++I
Sbjct: 90 LDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMI 149
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
+ +++ D +A +FD +D++++NS++ Y G +++++F M D I
Sbjct: 150 TGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQ-NGMSTESMEIFHRMVK-DGEINY 207
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
+ T+++ L C + G+ +H ++K +++ F +S+IDMY KC
Sbjct: 208 NAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKC---------- 257
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
G++EMA K F R E N SW+ +++GY +G A+E
Sbjct: 258 ----------------------GKVEMARKAFDRMREKN-VKSWSAMVAGYGMHGHAKEA 294
Query: 244 LKLFVRMGENGVRWNEHTFASALSAC 269
L++F M GV+ N TF S L+AC
Sbjct: 295 LEVFYEMNMAGVKPNYITFVSVLAAC 320
>gi|357122034|ref|XP_003562721.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Brachypodium distachyon]
Length = 689
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 195/655 (29%), Positives = 310/655 (47%), Gaps = 108/655 (16%)
Query: 16 AIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQA 75
A K+GL + L+H+Y+K +R++R++FD MPERN SWN +I+ ++S + Q
Sbjct: 117 AFKSGLADNVFAASALLHMYAKCGRVRDARRVFDGMPERNTVSWNALIAGYVESGKVLQ- 175
Query: 76 RSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLC 135
AL+LFI M++ E + DE T + L
Sbjct: 176 -------------------------------ALELFINMET--ERLVPDEATFAALLT-A 201
Query: 136 VKLLNVGFGRQLHAFMVKTSNDASGFAVS-SLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
N QLH +VK + A G VS + I YS+C E+ R+F+ + +LIS
Sbjct: 202 FDDSNYFLMHQLHGKIVKYGS-ALGLTVSNAAITAYSQCGALAESRRIFDQIGDSRDLIS 260
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM-GEN 253
WN ++ Y +G + + FVRM E+
Sbjct: 261 --------------------------------WNAMLGAYTYHGMDYDAMGFFVRMIRES 288
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA 313
GV+ + ++F S +S C + + + IH V+KNGL V + ++ +Y +
Sbjct: 289 GVQLDMYSFTSIISTCPEHDDHQ-GRAIHGLVIKNGLEGATPVCNALIAMYTR------- 340
Query: 314 ESMLLLKGVRNSFSISSMIVGYSLQGN--MEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
+ GN ME+A + FDSL K+ V W ++ +GY + N
Sbjct: 341 -----------------------ISGNCMMEDACKCFDSLLIKDTVSWNSMLTGYSQ-HN 376
Query: 372 CEALFDLLSEF--VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
A D L F + + D L +C+ A L G++IH I+ G + +
Sbjct: 377 LSA--DALRFFRCMQSANIRCDEYAFSAALRSCSELAVLQLGRQIHGSIIHSGFASNNFV 434
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
S+L+ MYSK G + A+ F+ + V +N MI YA HGH LF EM+E +
Sbjct: 435 SSSLIFMYSKSGILDDAKKSFEEADKGSSVPWNSMIFGYAQHGHAHIVHSLFNEMVELKV 494
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
D VTFV ++++ H G V+ G + N+M Y I +HYAC +DLYGRA QLEKA
Sbjct: 495 PLDHVTFVGLITSCSHAGLVDEGSEILNAMETRYGIPLRMEHYACGVDLYGRAGQLEKAK 554
Query: 550 EFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEG 609
E + S+P E DA++ + L CR++ N ELA E LL E + Y+ L+++Y+ G
Sbjct: 555 ELIDSMPFEPDAMVWMTLLGACRIHGNMELASEVASHLLVSEPKQHSTYILLSSMYSGLG 614
Query: 610 NWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIF 664
W++ ++++M+ ++ G SW+ V++E+H F D SHP+ + IY +L++
Sbjct: 615 MWSDRAIVQREMKNRGLSKVPGWSWIEVKNEVHSFNAEDRSHPRMDEIYEMLSLL 669
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 112/468 (23%), Positives = 206/468 (44%), Gaps = 99/468 (21%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPE-RNVFSWNTIISACIKSHD 71
H + +K G L +N I YS+ L ESR++FD++ + R++ SWN ++ A
Sbjct: 214 HGKIVKYGSALGLTVSNAAITAYSQCGALAESRRIFDQIGDSRDLISWNAMLGA------ 267
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
TY+ G + DA+ F+ M + +++D ++ TS
Sbjct: 268 ----------------YTYH----------GMDYDAMGFFVRMIR-ESGVQLDMYSFTSI 300
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
++ C + + GR +H ++K + + ++LI MY++
Sbjct: 301 ISTCPE-HDDHQGRAIHGLVIKNGLEGATPVCNALIAMYTR------------------- 340
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
IS N M ME A K F + D VSWN++++GY Q+ + + L+ F M
Sbjct: 341 -ISGNCM---------MEDACKCF-DSLLIKDTVSWNSMLTGYSQHNLSADALRFFRCMQ 389
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
+R +E+ F++AL +C L ++ ++IH ++ +G SN FVS
Sbjct: 390 SANIRCDEYAFSAALRSCSELAVLQLGRQIHGSIIHSGFASNNFVS-------------- 435
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
SS+I YS G +++A++ F+ + + V W ++ GY + +
Sbjct: 436 -----------------SSLIFMYSKSGILDDAKKSFEEADKGSSVPWNSMIFGYAQHGH 478
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI-HAYILRMGVQMDKKLI 430
+ L +E V + V D + V L+ +C+ + G EI +A R G+ + +
Sbjct: 479 AHIVHSLFNEMVELK-VPLDHVTFVGLITSCSHAGLVDEGSEILNAMETRYGIPLRMEHY 537
Query: 431 STLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
+ VD+Y + G + A E+I E D +++ ++ HG+ E A
Sbjct: 538 ACGVDLYGRAGQLEKAKELIDSMPFEPDAMVWMTLLGACRIHGNMELA 585
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 122/281 (43%), Gaps = 35/281 (12%)
Query: 223 DAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIH 282
DA SWN+L++ +V G L M GV N S+L + R ++
Sbjct: 55 DAASWNSLLTAHVSAGAHPAAWCLLRAMHAQGVAANTFALGSSLRSAAAARCPALGAQLQ 114
Query: 283 SWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNME 342
S K+GL N F +S ++ +Y KC G +
Sbjct: 115 SLAFKSGLADNVFAASALLHMYAKC-------------------------------GRVR 143
Query: 343 EARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGAC 402
+ARR FD + E+N V W AL +GYV++ +L T E +V D LL A
Sbjct: 144 DARRVFDGMPERNTVSWNALIAGYVESGKVLQALELFINMET-ERLVPDEATFAALLTAF 202
Query: 403 ALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIE-RDLVLY 461
+ ++H I++ G + + + + YS+CG + + IF + RDL+ +
Sbjct: 203 D-DSNYFLMHQLHGKIVKYGSALGLTVSNAAITAYSQCGALAESRRIFDQIGDSRDLISW 261
Query: 462 NVMIACYAHHGHEEKAILLFEEML-EKGIKPDAVTFVAILS 501
N M+ Y +HG + A+ F M+ E G++ D +F +I+S
Sbjct: 262 NAMLGAYTYHGMDYDAMGFFVRMIRESGVQLDMYSFTSIIS 302
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 2/174 (1%)
Query: 331 MIVGYSLQG-NMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVV 389
++ YSL + ARR FD + + W +L + +V A A + LL + +GV
Sbjct: 30 LLTAYSLSPLGLAAARRVFDEIPRPDAASWNSLLTAHVSAGAHPAAWCLLRA-MHAQGVA 88
Query: 390 TDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEII 449
+ L L + A G ++ + + G+ + S L+ MY+KCG + A +
Sbjct: 89 ANTFALGSSLRSAAAARCPALGAQLQSLAFKSGLADNVFAASALLHMYAKCGRVRDARRV 148
Query: 450 FQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAF 503
F ER+ V +N +IA Y G +A+ LF M + + PD TF A+L+AF
Sbjct: 149 FDGMPERNTVSWNALIAGYVESGKVLQALELFINMETERLVPDEATFAALLTAF 202
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 170/551 (30%), Positives = 281/551 (50%), Gaps = 71/551 (12%)
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS-LIDMYSKCRCYEEACRV 182
D S+L C L V RQ+HA + T+ AV++ L+ MY + E+A +
Sbjct: 52 DTKRFRSSLLSCRNLFQV---RQVHA-QIATNGAFRNLAVANKLLYMYVERGALEDAQEL 107
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
F+G ++ R P SW+ ++ GY + G+
Sbjct: 108 FDGMSK----------------------------RHP-----YSWSVIVGGYAKVGNFFS 134
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
+F + +G ++++ + AC L+++KC + IH LK GL FV + +VD
Sbjct: 135 CFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVD 194
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
+Y +C+ + A + + R+ + + MI +L E V V + +
Sbjct: 195 MYARCKVVEDAHQIFVKMWKRDLATWTVMI----------------GALAESGVPVESLV 238
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
F FD + +G+V D + LV ++ ACA A++ K IHAYI G
Sbjct: 239 F------------FDRMRN----QGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTG 282
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
+D L + ++DMY+KCG++ A IF R+++ ++ MIA Y +HG EKA+ LF
Sbjct: 283 YSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFP 342
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRA 542
ML GI P+ +TFV++L A H G +E G+++F+SM +Y ++P+ HY CM+DL GRA
Sbjct: 343 MMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRA 402
Query: 543 NQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLA 602
+L++A+E ++ +P E+D V+ G+ L CR++R+ +LA LL+L+ YV L+
Sbjct: 403 GRLDEALEMIEGMPVEKDEVLWGALLGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLS 462
Query: 603 NVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLA 662
N+YA G W +M + R M + G +W+ V +++ F VGD +HP++N IY +L
Sbjct: 463 NIYANAGKWEDMAKTRDLMTKGGLRKIPGRTWIEVGEKLYQFGVGDKTHPRSNEIYKMLK 522
Query: 663 IFTGELYEIAG 673
GE E+AG
Sbjct: 523 RL-GEKLEVAG 532
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/469 (20%), Positives = 183/469 (39%), Gaps = 102/469 (21%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
NL + H Q G N+L+++Y + L ++++LFD M +R+ +SW+ I+
Sbjct: 65 NLFQVRQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVG 124
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
K N C ++ E + A +D
Sbjct: 125 GYAK--------------------VGNFFSCFWMFRELLRSGA--------------PLD 150
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
+++ + C L ++ GR +H +K D F ++L+DMY++C+ E+A ++F
Sbjct: 151 DYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIF- 209
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
W++ D +W +I ++G E L
Sbjct: 210 ----------------------------VKMWKR----DLATWTVMIGALAESGVPVESL 237
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
F RM G+ ++ + + AC L + AK IH+++ G + + + ++D+Y
Sbjct: 238 VFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMY 297
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
KC ++ A + VRN + S+MI Y G E+A F
Sbjct: 298 AKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELF---------------- 341
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL-RMGV 423
+ + G++ + + V LL AC+ + G+ + + GV
Sbjct: 342 ----------------PMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGV 385
Query: 424 QMDKKLISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMI-ACYAH 470
D K + +VD+ + G + A E+I +E+D VL+ ++ AC H
Sbjct: 386 TPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALLGACRIH 434
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 137/332 (41%), Gaps = 75/332 (22%)
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
+ ++ F S+L +C RN+ +++H+ + NG N V++ ++ +Y +
Sbjct: 49 LHYDTKRFRSSLLSC---RNLFQVRQVHAQIATNGAFRNLAVANKLLYMYVE-------- 97
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEA 374
+G +E+A+ FD +++++ W+ + GY K N +
Sbjct: 98 -----------------------RGALEDAQELFDGMSKRHPYSWSVIVGGYAKVGNFFS 134
Query: 375 LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLV 434
F + E + + G D +++ AC L G+ IH L+ G+ + +TLV
Sbjct: 135 CFWMFRELL-RSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLV 193
Query: 435 DMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAV 494
DMY++C + A IF +RDL + VMI A G ++++ F+ M +GI PD V
Sbjct: 194 DMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKV 253
Query: 495 TFVAILSA-----------------------------------FRHCGSVEMGEKYFNSM 519
V ++ A + CGSVE F+ M
Sbjct: 254 ALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRM 313
Query: 520 TADYKISPETDHYACMIDLYGRANQLEKAIEF 551
I+ ++ MI YG Q EKA+E
Sbjct: 314 QVRNVIT-----WSAMIAAYGYHGQGEKALEL 340
>gi|334183275|ref|NP_175765.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806499|sp|Q9C8L6.2|PPR80_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g53600, mitochondrial; Flags: Precursor
gi|332194847|gb|AEE32968.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 717
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 196/692 (28%), Positives = 334/692 (48%), Gaps = 48/692 (6%)
Query: 14 VQAIKAGLTLTTITT-----NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIK 68
Q + L TT +T N I ++++ L+E+ +F +M R++ SW +ISA +
Sbjct: 34 TQKTRNFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAE 93
Query: 69 SHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
+ + +A +FD P + +YN+M+ I + A +LF ++ E
Sbjct: 94 NGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIP---------EKNA 144
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSND-ASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
S + + G + +T A + L+ Y + + EA RVF+G
Sbjct: 145 VSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMA 204
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
+ ++S ++MV C+ G + A F R E N ++W +I GY + G E+G LF
Sbjct: 205 VK-EVVSCSSMVHGYCKMGRIVDARSLFDRMTERN-VITWTAMIDGYFKAGFFEDGFGLF 262
Query: 248 VRMGENG-VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
+RM + G V+ N +T A AC + +IH V + L + F+ + ++ +Y K
Sbjct: 263 LRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSK 322
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL---F 363
M A+++ + ++S S +S+I G + + EA F+ + K++V WT + F
Sbjct: 323 LGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGF 382
Query: 364 SGYVKAQNCEALFDLLSE------------FVT---------------KEGVVTDALILV 396
SG + C LF ++ E FV+ ++ V ++
Sbjct: 383 SGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFS 442
Query: 397 ILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER 456
+L A A A L G +IH +++M + D + ++LV MY KCGN A IF E
Sbjct: 443 SVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEP 502
Query: 457 DLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYF 516
++V YN MI+ Y+++G +KA+ LF + G +P+ VTF+A+LSA H G V++G KYF
Sbjct: 503 NIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYF 562
Query: 517 NSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRN 576
SM + Y I P DHYACM+DL GR+ L+ A + ++P + + + GS L+ + +
Sbjct: 563 KSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLR 622
Query: 577 AELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVY 636
+LA A +KL+ LE ++ YV L+ +Y+ G + RI + + + G SW+
Sbjct: 623 VDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWII 682
Query: 637 VEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
++ E+H F GD S I L + E+
Sbjct: 683 LKGEVHNFLAGDESQLNLEEIGFTLKMIRKEM 714
>gi|449442815|ref|XP_004139176.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g05340-like [Cucumis sativus]
Length = 838
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 166/542 (30%), Positives = 285/542 (52%), Gaps = 46/542 (8%)
Query: 132 LNLCVKLLNVGFGRQLHAFMVKT---SNDASGFAV-SSLIDMYSKCRCYEEACRVFEGCT 187
L++C + N+ G LHA ++K+ SN +G + +SLI MY +C +A +VF+
Sbjct: 52 LSICGREGNLHLGSSLHASIIKSFELSNHYNGVVIMNSLISMYDRCGKLPDAVKVFDEMI 111
Query: 188 EEVNLISKNAMVAACCREGE-------MEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+ IS NA++ R G + + ++ F+ E N ++W +ISG QNG
Sbjct: 112 TR-DTISWNALIGGFVRNGNSYFKCGCVGLGMQVFYEMGERN-VITWTAVISGLAQNGYH 169
Query: 241 EEGLKLFVRMGENG-VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
E LKLF M G V N T+ S L+AC GL +K +IH ++K G+ S+ + S
Sbjct: 170 EHSLKLFKEMMSYGSVEPNSLTYLSLLTACSGLEALKEGCQIHGLIMKLGIQSDLCIGSA 229
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
++D+Y K G + EA + F+ E ++V
Sbjct: 230 LMDMYSK-------------------------------SGRIGEAWKIFELAEELDMVSL 258
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
T + +G+ CE + + K G+ D ++ ++LG +L G+++H++++
Sbjct: 259 TVILAGFTH-NGCEEEAIQIFLKMLKMGIEIDGNVVSVVLGVFGADTSLRLGQQVHSFVV 317
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
+ + + + L++MYSKCG + + +F ER+ V +N MIA +A HG KA+
Sbjct: 318 KKNFICNPFVSNGLINMYSKCGALDESMKVFDRMRERNSVTWNSMIAAFARHGDALKALQ 377
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
L+E+M +G KP VTF+++L A H G V+ G ++ SMT D+ ++P ++H+AC++D+
Sbjct: 378 LYEDMQLEGAKPTDVTFLSLLHACSHAGLVKKGMEFLKSMTKDHGMNPRSEHHACVVDML 437
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYV 599
GRA L +A F++ +P + ++ + L C L ++++ A E L ++ YV
Sbjct: 438 GRAGMLSEARNFIEKLPEQPGLLVWQALLGACSLYGDSKIGKYAAEHLFSETPDSPVPYV 497
Query: 600 QLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYS 659
LAN+Y++EGNW E R ++M+ + + G SW+ ++ ++H FTVGD HP+T IY
Sbjct: 498 LLANIYSSEGNWKERARTIRKMKEVGTAKETGISWIEIDKKVHSFTVGDKMHPQTEMIYG 557
Query: 660 VL 661
VL
Sbjct: 558 VL 559
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 200/440 (45%), Gaps = 81/440 (18%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHD-------LKQARSL 78
+ N LI +Y + L ++ K+FDEM R+ SWN +I +++ + + +
Sbjct: 85 VIMNSLISMYDRCGKLPDAVKVFDEMITRDTISWNALIGGFVRNGNSYFKCGCVGLGMQV 144
Query: 79 FDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKL 138
F ++++T+ +++ G + GY +LKLF EM S + + T S L C L
Sbjct: 145 FYEMGERNVITWTAVISG-LAQNGYHEHSLKLFKEMMSYGS-VEPNSLTYLSLLTACSGL 202
Query: 139 LNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAM 198
+ G Q+H ++K + S+L+DMYSK EA ++FE EE++++S +
Sbjct: 203 EALKEGCQIHGLIMKLGIQSDLCIGSALMDMYSKSGRIGEAWKIFE-LAEELDMVSLTVI 261
Query: 199 VAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWN 258
+A G+ NG EE +++F++M + G+ +
Sbjct: 262 LA--------------------------------GFTHNGCEEEAIQIFLKMLKMGIEID 289
Query: 259 EHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLL 318
+ + L +++ +++HS+V+K I NPFVS+G++++Y KC
Sbjct: 290 GNVVSVVLGVFGADTSLRLGQQVHSFVVKKNFICNPFVSNGLINMYSKC----------- 338
Query: 319 LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDL 378
G ++E+ + FD + E+N V W ++ + + A++ +AL L
Sbjct: 339 --------------------GALDESMKVFDRMRERNSVTWNSMIAAF--ARHGDALKAL 376
Query: 379 -LSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR-MGVQMDKKLISTLVDM 436
L E + EG + + LL AC+ + G E + + G+ + + +VDM
Sbjct: 377 QLYEDMQLEGAKPTDVTFLSLLHACSHAGLVKKGMEFLKSMTKDHGMNPRSEHHACVVDM 436
Query: 437 YSKCGNMTYAEIIFQNFIER 456
+ G ++ A +NFIE+
Sbjct: 437 LGRAGMLSEA----RNFIEK 452
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 384 TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK-----LISTLVDMYS 438
T V + L LL C + LH G +HA I++ ++ ++++L+ MY
Sbjct: 37 TSSTFVLNHLDPSFLLSICGREGNLHLGSSLHASIIK-SFELSNHYNGVVIMNSLISMYD 95
Query: 439 KCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE-------EKAILLFEEMLEKGIKP 491
+CG + A +F I RD + +N +I + +G+ + +F EM E+ +
Sbjct: 96 RCGKLPDAVKVFDEMITRDTISWNALIGGFVRNGNSYFKCGCVGLGMQVFYEMGERNV-- 153
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMI 536
+T+ A++S G E K F M + + P + Y ++
Sbjct: 154 --ITWTAVISGLAQNGYHEHSLKLFKEMMSYGSVEPNSLTYLSLL 196
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 102/261 (39%), Gaps = 53/261 (20%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K +N LI++YSK L ES K+FD M ERN +WN++I+A +
Sbjct: 313 HSFVVKKNFICNPFVSNGLINMYSKCGALDESMKVFDRMRERNSVTWNSMIAAFAR---- 368
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
H D + AL+L+ +MQ E + + T S L
Sbjct: 369 -----------HGDALK-----------------ALQLYEDMQL--EGAKPTDVTFLSLL 398
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS----LIDMYSKCRCYEEACRVFEGCTE 188
+ C + G ++ F+ + D S ++DM + EA E E
Sbjct: 399 HACS---HAGLVKKGMEFLKSMTKDHGMNPRSEHHACVVDMLGRAGMLSEARNFIEKLPE 455
Query: 189 EVNLISKNAMVAACCREGEMEM----ALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
+ L+ A++ AC G+ ++ A F P+ V + L + Y G+ +E
Sbjct: 456 QPGLLVWQALLGACSLYGDSKIGKYAAEHLFSETPD--SPVPYVLLANIYSSEGNWKERA 513
Query: 245 KLFVRM------GENGVRWNE 259
+ +M E G+ W E
Sbjct: 514 RTIRKMKEVGTAKETGISWIE 534
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 167/525 (31%), Positives = 272/525 (51%), Gaps = 9/525 (1%)
Query: 152 VKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLI------SKNAMVAACCRE 205
TS +S + + + +C EE R G + LI SK A
Sbjct: 7 TPTSQLSSESNAAQTLHLLQRCSNMEE-LRQIHGQMLKTGLILDEIPASKLLAFCASPNS 65
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASA 265
G + A F R N + WNT+I GY + + EE L L+ M + V N +TF
Sbjct: 66 GSLAYARTVFDRIFRPNTFM-WNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFL 124
Query: 266 LSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNS 325
L AC + ++ ++IH+ ++K G S + ++ +++VY K ++ A + R++
Sbjct: 125 LKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDT 184
Query: 326 FSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTK 385
S +SMI GY+ G +E A F+ + E+N++ WT++ SG V A + +L T
Sbjct: 185 VSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTA 244
Query: 386 EGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTY 445
G+ D + LV L ACA L GK IHAYI + +++D L L+DMY+KCG++
Sbjct: 245 -GIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEE 303
Query: 446 AEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRH 505
A +F+ E+ + ++ MI+ YA HG +A+ F +M G++P+ +TF IL+A H
Sbjct: 304 AIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSH 363
Query: 506 CGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILG 565
G V + F SM + P +HY CM+DL GRA L++A E ++++P + +A I G
Sbjct: 364 AGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWG 423
Query: 566 SFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMK 625
+ LN C ++ N EL + + L++++ + RY+ LA+++AA G W + R+R+QM+
Sbjct: 424 ALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQG 483
Query: 626 GNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYE 670
++ GCS + V H F GD SHP+ I +L L E
Sbjct: 484 VSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLRE 528
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 119/475 (25%), Positives = 212/475 (44%), Gaps = 75/475 (15%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNL--LRESRKLFDEMPERNVFSW 59
R N++E H Q +K GL L I ++L+ + N L +R +FD + N F W
Sbjct: 27 RCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMW 86
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
NT+I S + P + L+ Y+ ML Y +
Sbjct: 87 NTMIRGYSNSKE-----------PEEALLLYHHML--------YHS-------------- 113
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
+ + +T L C + + +Q+HA ++K + + +SL+++YSK + A
Sbjct: 114 -VPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSA 172
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
+F+ ++ + +S N+M+ + GE+EMA + F PE N +SW ++ISG V G
Sbjct: 173 RLLFDQ-VDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERN-IISWTSMISGCVGAGK 230
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
+E L LF RM G++ + S L AC L + K IH+++ K+ + +P +
Sbjct: 231 PKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCV 290
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
++D+Y KC G++EEA F + EK V VW
Sbjct: 291 LIDMYAKC-------------------------------GDLEEAIEVFRKMEEKGVSVW 319
Query: 360 TALFSGY-VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
TA+ SGY + + EAL + + GV + + +L AC+ +H K + +
Sbjct: 320 TAMISGYAIHGRGREALEWFMK--MQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESM 377
Query: 419 LRM-GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMI-ACYAH 470
R+ G + + +VD+ + G + AE + +N ++ + ++ ++ AC+ H
Sbjct: 378 ERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIH 432
>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 693
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 176/566 (31%), Positives = 295/566 (52%), Gaps = 53/566 (9%)
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
+L+ F K S F + L+ +Y+K +A VF+ T+ ++ S N +++A +
Sbjct: 49 ELNLFQPKDS-----FIHNQLLHLYAKFGKLSDAQNVFDNMTKR-DVYSWNTLLSAYAKM 102
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASA 265
G +E L + Q D+VS+NTLI+ + NG + + LK+ VRM E+G + +++ +A
Sbjct: 103 GMVE-NLHVVFDQMPYRDSVSYNTLIACFASNGHSGKALKVLVRMQEDGFQPTQYSHVNA 161
Query: 266 LSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGV--R 323
L AC L +++ K+IH ++ L N FV + + D+Y KC +++ A LL G+ +
Sbjct: 162 LQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDIDKAR--LLFDGMIDK 219
Query: 324 NSFSISSMIVGYSLQGN-----------------------------------MEEARRHF 348
N S + MI GY GN +++AR F
Sbjct: 220 NVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNAYFRCGRVDDARNLF 279
Query: 349 DSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAAL 408
L +K+ + WT + GY + E + L + + + V D+ + ++ +CA A+L
Sbjct: 280 IKLPKKDEICWTTMIVGYAQNGREEDAWMLFGDML-RRNVKPDSYTISSMVSSCAKLASL 338
Query: 409 HPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACY 468
+ G+ +H ++ MG+ + S LVDMY KCG A +IF+ R+++ +N MI Y
Sbjct: 339 YHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAMILGY 398
Query: 469 AHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE 528
A +G +A+ L+E M ++ KPD +TFV +LSA + V+ G+KYF+S++ ++ I+P
Sbjct: 399 AQNGQVLEALTLYERMQQENFKPDNITFVGVLSACINADMVKEGQKYFDSIS-EHGIAPT 457
Query: 529 TDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLN--RNAELAGEAEEK 586
DHYACMI L GR+ ++KA++ ++ +P E + I + L+VC +NAELA
Sbjct: 458 LDHYACMITLLGRSGSVDKAVDLIQGMPHEPNYRIWSTLLSVCAKGDLKNAELAA---SH 514
Query: 587 LLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTV 646
L L+ N Y+ L+N+YAA G W ++ +R M+ +FA SWV V +++H F
Sbjct: 515 LFELDPRNAGPYIMLSNLYAACGRWKDVAVVRSLMKEKNAKKFAAYSWVEVGNKVHRFVS 574
Query: 647 GDVSHPKTNAIYSVLAIFTGELYEIA 672
D HP+ IY L L +I
Sbjct: 575 EDHYHPEVGKIYGELNRLISILQQIG 600
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 147/584 (25%), Positives = 279/584 (47%), Gaps = 85/584 (14%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLV 88
NQL+H+Y+K L +++ +FD M +R+V+SWNT++SA K ++ +FD P++D V
Sbjct: 62 NQLLHLYAKFGKLSDAQNVFDNMTKRDVYSWNTLLSAYAKMGMVENLHVVFDQMPYRDSV 121
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLH 148
+YN+++ + + G+ ALK+ + MQ ++ + +++ + L C +LL++ G+Q+H
Sbjct: 122 SYNTLIACFA-SNGHSGKALKVLVRMQ--EDGFQPTQYSHVNALQACSQLLDLRHGKQIH 178
Query: 149 AFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREG-- 206
+V + F +++ DMY+KC ++A +F+G ++ N++S N M++ + G
Sbjct: 179 GRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMIDK-NVVSWNLMISGYVKMGNP 237
Query: 207 --------EMEMA------------LKTFWRQPELNDA------------VSWNTLISGY 234
EM+++ L ++R ++DA + W T+I GY
Sbjct: 238 NECIHLFNEMQLSGLKPDLVTVSNVLNAYFRCGRVDDARNLFIKLPKKDEICWTTMIVGY 297
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
QNG E+ LF M V+ + +T +S +S+C L ++ + +H V+ G+ ++
Sbjct: 298 AQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSM 357
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
VSS +VD+YCKC A + +RN + ++MI+GY+ G + EA ++ + ++
Sbjct: 358 LVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQVLEALTLYERMQQE 417
Query: 355 NVVVWTALFSGYVKA-------QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAA 407
N F G + A + + FD +SE + A ++ +L + ++ A
Sbjct: 418 NFKPDNITFVGVLSACINADMVKEGQKYFDSISEHGIAPTLDHYACMITLLGRSGSVDKA 477
Query: 408 LHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD-------LVL 460
+ I M + + ++ STL+ + +K G++ AE+ + E D ++L
Sbjct: 478 VD-------LIQGMPHEPNYRIWSTLLSVCAK-GDLKNAELAASHLFELDPRNAGPYIML 529
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
N+ AC G + ++ M EK K F VE+G K ++
Sbjct: 530 SNLYAAC----GRWKDVAVVRSLMKEKNAK-----------KFAAYSWVEVGNKVHRFVS 574
Query: 521 ADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVIL 564
D+ PE +YG N+L I ++ I D I+
Sbjct: 575 EDH-YHPEVG------KIYGELNRL---ISILQQIGYNPDTNIV 608
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 136/322 (42%), Gaps = 71/322 (22%)
Query: 4 LNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
L+L+ H + + A L T N + +Y+K + ++R LFD M ++NV SWN +I
Sbjct: 169 LDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSWNLMI 228
Query: 64 SACIKSHD-----------------------------------LKQARSLFDSSPHKDLV 88
S +K + + AR+LF P KD +
Sbjct: 229 SGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNAYFRCGRVDDARNLFIKLPKKDEI 288
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLH 148
+ +M+ GY G E DA LF +M +++ D +T++S ++ C KL ++ G+ +H
Sbjct: 289 CWTTMIVGYAQ-NGREEDAWMLFGDMLR--RNVKPDSYTISSMVSSCAKLASLYHGQVVH 345
Query: 149 AFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEM 208
+V D S S+L+DMY KC +A +FE N+I+ NAM
Sbjct: 346 GKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIR-NVITWNAM---------- 394
Query: 209 EMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSA 268
I GY QNG E L L+ RM + + + TF LSA
Sbjct: 395 ----------------------ILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSA 432
Query: 269 CCGLRNVKCAKEIHSWVLKNGL 290
C VK ++ + ++G+
Sbjct: 433 CINADMVKEGQKYFDSISEHGI 454
>gi|222622633|gb|EEE56765.1| hypothetical protein OsJ_06312 [Oryza sativa Japonica Group]
Length = 836
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 182/623 (29%), Positives = 312/623 (50%), Gaps = 50/623 (8%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
E ++ N +++ K +++ S+F SS D+VT+N+++ GY+ Y + ALKLF
Sbjct: 200 EMDISVSNALMAHYSKVCEMRAVESIFRSSKMGDIVTWNTVIAGYV-MNRYPSRALKLFQ 258
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV-SSLIDMYS 171
+ A + D ++ S L C ++ N+ G ++H ++ + ++ ++L+ YS
Sbjct: 259 GLLFAG--MAPDSVSLISLLTACAQVGNLRVGIRVHGYIFRHPELLQETSLMNALVSFYS 316
Query: 172 KCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLI 231
+C ++ A R F + + +K D+VSWN ++
Sbjct: 317 QCDRFDAAFRSF------ITIQNK---------------------------DSVSWNAIL 343
Query: 232 SGYVQN-GDAEEGLKLFVRMGENGVRWNEHTFASA--LSACCGLRNVKCAKEIHSWVLKN 288
S + E+ +L M + +W+ T + +S CG++ V+ E H + L+
Sbjct: 344 SACANSEHHIEQFFRLLGEMWHDVTQWDSVTILNIIRMSTFCGIKMVQ---ESHGYSLRV 400
Query: 289 GLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHF 348
G + V++ I+D Y KC ++ AE++ RN + ++MI Y +E+A F
Sbjct: 401 GYTGDSSVANAILDAYAKCGYLHDAETLFRSLAGRNIVTGNTMISCYLKNNCVEDAEMTF 460
Query: 349 DSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAAL 408
+ + EK++ W + Y + C+ F L + + EG+ D + + +L AC +++
Sbjct: 461 NHMAEKDLTTWNLMSRLYAQNDLCDQAFCLFHQ-LQSEGLNPDTISITNILSACIHLSSV 519
Query: 409 HPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACY 468
K+ H Y+LR ++ D L L+D YSKCGN+ A +FQ + +DLV++ MI Y
Sbjct: 520 QLVKQCHGYMLRASLE-DIHLEGALLDAYSKCGNIANAYNLFQVSLHKDLVIFTAMIGAY 578
Query: 469 AHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE 528
A HG EKA+ LF +ML IKPD V A+LSA H G V+ G K F S+ Y + P
Sbjct: 579 AMHGMAEKAVELFSKMLTLDIKPDHVVLTALLSACSHAGLVDAGIKIFKSIREIYGVEPT 638
Query: 529 TDHYACMIDLYGRANQLEKAIEFMKSIPTE-EDAVILGSFLNVCRLNRNAELAGEAEEKL 587
+H ACM+DL R+ +L+ A F +P +A GS L C+++ ++ A ++L
Sbjct: 639 EEHCACMVDLLARSGRLQDAYSFALDMPPHVVNANAWGSLLGACKVHGEVKIGQLAADRL 698
Query: 588 LRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVG 647
+E + YV ++N++AA+ W + +RK M+ + AGCSW+ VE H+F
Sbjct: 699 FSMEAEDIGNYVIMSNIFAADDKWESVEHVRKLMKSKDMKKPAGCSWIEVEKTRHLFVAS 758
Query: 648 DVSHPKTNAIYSVLAIFTGELYE 670
DV H +IY VL G LY+
Sbjct: 759 DVQHQDRFSIYDVL----GSLYQ 777
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 145/618 (23%), Positives = 255/618 (41%), Gaps = 144/618 (23%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H IK GL T++ N L+ +Y+K C S +
Sbjct: 86 HGYVIKTGLEFDTLSGNALVSMYAK----------------------------CGGSIAM 117
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
A F + KD+V++NS++ GY + G +AL LF +M S E + T+ + L
Sbjct: 118 DDAHLAFSTICCKDVVSWNSIIAGY-SENGLFEEALALFGQMIS--EECLPNYSTLANVL 174
Query: 133 NLCVKLLNVG--FGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
C L+ G +G+++H F+V+ E+
Sbjct: 175 PFC-SLVEYGRHYGKEIHGFVVRHG--------------------------------LEM 201
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
++ NA++A + EM A+++ +R ++ D V+WNT+I+GYV N LKLF +
Sbjct: 202 DISVSNALMAHYSKVCEMR-AVESIFRSSKMGDIVTWNTVIAGYVMNRYPSRALKLFQGL 260
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG-LISNPFVSSGIVDVYCKCEN 309
G+ + + S L+AC + N++ +H ++ ++ L+ + + +V Y +C+
Sbjct: 261 LFAGMAPDSVSLISLLTACAQVGNLRVGIRVHGYIFRHPELLQETSLMNALVSFYSQCD- 319
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
+ A R F ++ K+ V W A+ S +
Sbjct: 320 ------------------------------RFDAAFRSFITIQNKDSVSWNAILSACANS 349
Query: 370 Q-NCEALFDLLSEF---VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
+ + E F LL E VT+ VT L ++ + C ++ +E H Y LR+G
Sbjct: 350 EHHIEQFFRLLGEMWHDVTQWDSVT-ILNIIRMSTFCGIKMV----QESHGYSLRVGYTG 404
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
D + + ++D Y+KCG + AE +F++ R++V N MI+CY + E A + F M
Sbjct: 405 DSSVANAILDAYAKCGYLHDAETLFRSLAGRNIVTGNTMISCYLKNNCVEDAEMTFNHMA 464
Query: 486 EK-------------------------------GIKPDAVTFVAILSAFRHCGSVEMGEK 514
EK G+ PD ++ ILSA H SV++ ++
Sbjct: 465 EKDLTTWNLMSRLYAQNDLCDQAFCLFHQLQSEGLNPDTISITNILSACIHLSSVQLVKQ 524
Query: 515 YFNSMTADYKISPETDHY-ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRL 573
M + S E H ++D Y + + A + + +D VI + + +
Sbjct: 525 CHGYM---LRASLEDIHLEGALLDAYSKCGNIANAYNLFQ-VSLHKDLVIFTAMIGAYAM 580
Query: 574 NRNAELAGEAEEKLLRLE 591
+ AE A E K+L L+
Sbjct: 581 HGMAEKAVELFSKMLTLD 598
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 128/510 (25%), Positives = 208/510 (40%), Gaps = 73/510 (14%)
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSA--DEHIRMDEFTVT 129
L A ++FD D V N ++ A G D LF M ++ DE + TV
Sbjct: 10 LADAHTVFDEMSCSDAVCRNILITASSRA-GLYNDVFHLFRAMLASGVDESMPT-AVTVA 67
Query: 130 STLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEE 189
L +C KL + GR +H +++KT + + ++L+ MY+KC ++
Sbjct: 68 VVLPVCAKLRVLRAGRSIHGYVIKTGLEFDTLSGNALVSMYAKCGG--------SIAMDD 119
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
+L A CC+ D VSWN++I+GY +NG EE L LF +
Sbjct: 120 AHL----AFSTICCK------------------DVVSWNSIIAGYSENGLFEEALALFGQ 157
Query: 250 MGENGVRWNEHTFASALSACCGLRNVK-CAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
M N T A+ L C + + KEIH +V+++GL + VS+ ++ Y K
Sbjct: 158 MISEECLPNYSTLANVLPFCSLVEYGRHYGKEIHGFVVRHGLEMDISVSNALMAHYSKVC 217
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
M ES+ F S ++V W + +GYV
Sbjct: 218 EMRAVESI-------------------------------FRSSKMGDIVTWNTVIAGYVM 246
Query: 369 AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG-VQMDK 427
+ L + G+ D++ L+ LL ACA L G +H YI R + +
Sbjct: 247 NRYPSRALKLFQGLLFA-GMAPDSVSLISLLTACAQVGNLRVGIRVHGYIFRHPELLQET 305
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMI-ACYAHHGHEEKAILLFEEMLE 486
L++ LV YS+C A F +D V +N ++ AC H E+ L EM
Sbjct: 306 SLMNALVSFYSQCDRFDAAFRSFITIQNKDSVSWNAILSACANSEHHIEQFFRLLGEMWH 365
Query: 487 KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLE 546
+ D+VT + I+ CG + E + S+ Y + ++ ++D Y + L
Sbjct: 366 DVTQWDSVTILNIIRMSTFCGIKMVQESHGYSLRVGY--TGDSSVANAILDAYAKCGYLH 423
Query: 547 KAIEFMKSIPTEEDAVILGSFLNVCRLNRN 576
A +S+ ++ G+ + C L N
Sbjct: 424 DAETLFRSLAGRN--IVTGNTMISCYLKNN 451
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 120/243 (49%), Gaps = 8/243 (3%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +++ G T + N ++ Y+K L ++ LF + RN+ + NT+IS +K++ +
Sbjct: 394 HGYSLRVGYTGDSSVANAILDAYAKCGYLHDAETLFRSLAGRNIVTGNTMISCYLKNNCV 453
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+ A F+ KDL T+N M Y + + A LF ++QS E + D ++T+ L
Sbjct: 454 EDAEMTFNHMAEKDLTTWNLMSRLYAQNDLCD-QAFCLFHQLQS--EGLNPDTISITNIL 510
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C+ L +V +Q H +M++ S + +L+D YSKC A +F+ + +L
Sbjct: 511 SACIHLSSVQLVKQCHGYMLRASLEDIHLE-GALLDAYSKCGNIANAYNLFQVSLHK-DL 568
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELN---DAVSWNTLISGYVQNGDAEEGLKLFVR 249
+ AM+ A G E A++ F + L+ D V L+S G + G+K+F
Sbjct: 569 VIFTAMIGAYAMHGMAEKAVELFSKMLTLDIKPDHVVLTALLSACSHAGLVDAGIKIFKS 628
Query: 250 MGE 252
+ E
Sbjct: 629 IRE 631
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 8/186 (4%)
Query: 335 YSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTK--EGVVTDA 392
Y G++ +A FD ++ + V L + +A +F L + + + A
Sbjct: 4 YGRIGSLADAHTVFDEMSCSDAVCRNILITASSRAGLYNDVFHLFRAMLASGVDESMPTA 63
Query: 393 LILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGN---MTYAEII 449
+ + ++L CA L G+ IH Y+++ G++ D + LV MY+KCG M A +
Sbjct: 64 VTVAVVLPVCAKLRVLRAGRSIHGYVIKTGLEFDTLSGNALVSMYAKCGGSIAMDDAHLA 123
Query: 450 FQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSV 509
F +D+V +N +IA Y+ +G E+A+ LF +M+ + P+ T +L C V
Sbjct: 124 FSTICCKDVVSWNSIIAGYSENGLFEEALALFGQMISEECLPNYSTLANVLP---FCSLV 180
Query: 510 EMGEKY 515
E G Y
Sbjct: 181 EYGRHY 186
>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
Length = 921
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 196/626 (31%), Positives = 302/626 (48%), Gaps = 91/626 (14%)
Query: 59 WNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSAD 118
WN++++ K +L+ A LF+ KD+V++N+M+ G +AL LF M +
Sbjct: 262 WNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAAN-EQRGEGENALGLFRRMLKVE 320
Query: 119 EHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEE 178
++ + T S L+ L + GR++HA + + S + +SLI YSKCR +
Sbjct: 321 PPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGK 380
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
A +FE + L D +SWN++++GY QN
Sbjct: 381 AREIFE---------------------------------RLLLRDIISWNSMLAGYEQNE 407
Query: 239 DAEEGLKLFVRMGENGVRWNEHT----FASALSACCGLRNVKCAKEIHSWVLKN---GLI 291
+F RM +G+ + H+ F +A GL + KEIH ++L+ G +
Sbjct: 408 QQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGV 467
Query: 292 SNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL 351
S VS+ I+ +Y K + AE + KG++N S S
Sbjct: 468 SLS-VSNAILKMYAKFNRIADAEK--IFKGMKNRDSYS---------------------- 502
Query: 352 TEKNVVVWTALFSGYVKAQNCEALFDLLSEF--VTKEGVVTDALILVILLGACALQAALH 409
W A+ GY + E D+L F + K+G D + L ILL +C +L
Sbjct: 503 -------WNAMMDGYSRNAKFE---DVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQ 552
Query: 410 PGKEIHAYILRMGVQMD----KKLIS---TLVDMYSKCGNMTYAEIIFQNFIERDLVLYN 462
GK+ HA + ++ D L+S L+ MYSKCG++ A +F +D+ +
Sbjct: 553 LGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLKMERKDVFSWT 612
Query: 463 VMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTAD 522
MI AHHG +A+ LFE M GIKP+ VTF+A+L A H G V+ G YF+SM D
Sbjct: 613 AMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLALLMACAHGGLVQEGSYYFDSMYND 672
Query: 523 YKISPETDHYACMIDLYGRANQLEKA---IEFMKSI--PTEEDAVILGS-FLNVCRLNRN 576
Y +SP +HYACMIDL+GR+ Q ++A +EF ++ P +D + L L C ++
Sbjct: 673 YGLSPSIEHYACMIDLFGRSGQFDRAKSLVEFGITLFKPYHDDILNLWKVLLGACHASKQ 732
Query: 577 AELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVY 636
+L EA K+L LE ++A Y+ LAN+YA+ G W + ++RK MR + GCSW+
Sbjct: 733 LDLGVEAATKILELEPEDEATYILLANLYASSGLWEDAIKVRKAMRDKGLRKEVGCSWID 792
Query: 637 VEHEIHIFTVGDVSHPKTNAIYSVLA 662
+ H+F GDV HP+ IY LA
Sbjct: 793 TGNRRHVFVAGDVYHPQRKEIYEKLA 818
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 204/433 (47%), Gaps = 68/433 (15%)
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
LK A+ LFD+ P++D++++++++ Y + A A LF +M E ++ + F++ S
Sbjct: 71 LKCAQQLFDNFPNRDVISWSALIAAYSRCGNF-AQAFGLFQKMMG--EGLQPNGFSLASL 127
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L + +G RQLH + ++T ++ I MYS+C E+A RVF +E +
Sbjct: 128 LKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVF----DETS 183
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
L++ D + WN++I+ Y+ +G E L+LF +M
Sbjct: 184 LLAL---------------------------DILLWNSIIAAYIFHGCWVEVLRLFCKMV 216
Query: 252 ENG-VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
G V E T+AS ++AC K +H ++K GL + +S +V Y KC N+
Sbjct: 217 SVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIKAGLEATNLWNS-LVTFYGKCGNL 275
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
+A + F+ ++ K+VV W A+ + +
Sbjct: 276 QHASQL-------------------------------FERISRKDVVSWNAMIAANEQRG 304
Query: 371 NCEALFDLLSEFVTKEGVV-TDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
E L + E V + + + LL A + +AL G+EIHA+I R+ +++D +
Sbjct: 305 EGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSI 364
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
++L+ YSKC + A IF+ + RD++ +N M+A Y + + + +F+ M+ GI
Sbjct: 365 TNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGI 424
Query: 490 KPDAVTFVAILSA 502
+PD+ + I +A
Sbjct: 425 EPDSHSLTIIFNA 437
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 153/339 (45%), Gaps = 41/339 (12%)
Query: 223 DAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIH 282
D +SW+ LI+ Y + G+ + LF +M G++ N + AS L C + +++H
Sbjct: 85 DVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCSTGEIGLCRQLH 144
Query: 283 SWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNME 342
W ++ G + + + + +Y +C G +E
Sbjct: 145 GWSIRTGFGLDSGIRAAWITMYSRC-------------------------------GVLE 173
Query: 343 EARRHFD--SLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLG 400
+A+R FD SL ++++W ++ + Y+ + L + V+ V L ++
Sbjct: 174 DAQRVFDETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVN 233
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL 460
AC G +H I++ G++ L ++LV Y KCGN+ +A +F+ +D+V
Sbjct: 234 ACGSSGEEKYGAMVHGRIIKAGLEA-TNLWNSLVTFYGKCGNLQHASQLFERISRKDVVS 292
Query: 461 YNVMIACYAHHGHEEKAILLFEEML--EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNS 518
+N MIA G E A+ LF ML E ++P+ VTF+++LSA ++ G +
Sbjct: 293 WNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAH 352
Query: 519 MTADYKISPETDHYAC--MIDLYGRANQLEKAIEFMKSI 555
+ +++S E D +I Y + ++ KA E + +
Sbjct: 353 I---FRLSLEVDTSITNSLITFYSKCREVGKAREIFERL 388
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 128/305 (41%), Gaps = 49/305 (16%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + L + T TN LI YSK + ++R++F+ + R++ SWN++++ ++
Sbjct: 350 HAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQ 409
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI--RMDEFTVTS 130
+ +F + + L NA ++ L F + +I R+ V+
Sbjct: 410 GRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSL 469
Query: 131 TLNLCVKLLNVGFGRQLHAFMV-KTSNDASGFAVSSLIDMYSKCRCYEEACRVF------ 183
+++ + + F R A + K + ++ ++++D YS+ +E+ +F
Sbjct: 470 SVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQ 529
Query: 184 --------------------------------------EGCTEEVNLIS-KNAMVAACCR 204
+ C + +L+S NA+++ +
Sbjct: 530 GFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSK 589
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFAS 264
G ++ A + F + E D SW +I+G +G A E L+LF RM +G++ N+ TF +
Sbjct: 590 CGSIKDAAQVFLKM-ERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLA 648
Query: 265 ALSAC 269
L AC
Sbjct: 649 LLMAC 653
>gi|449522252|ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g37310-like [Cucumis sativus]
Length = 635
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 182/661 (27%), Positives = 306/661 (46%), Gaps = 70/661 (10%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + + + + ++LI YSK +R++ +F ++P +N+FSWN
Sbjct: 26 HARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVFGKIPRKNIFSWN------------ 73
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM-QSADEHIRMDEFTVTST 131
+LF S ++ T D LKLF + S ++ D FTVT +
Sbjct: 74 ----ALFISYTLHNMHT----------------DLLKLFSSLVNSNSTDVKPDRFTVTCS 113
Query: 132 LNLCVKLL-NVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L L N G +++H+F+++ + F V++LI YS+C
Sbjct: 114 LKALASLFSNSGLAKEVHSFILRRGLEYDIFVVNALITFYSRC----------------- 156
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF-VR 249
E+ +A F R PE D VSWN +++GY Q G EE +LF V
Sbjct: 157 ---------------DELVLARIMFDRMPE-RDTVSWNAMLAGYSQGGSYEECKELFRVM 200
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
+ V+ N T S L AC ++ E+H +V ++ + + + + ++ +Y KC
Sbjct: 201 LSSVEVKPNALTAVSVLQACAQSNDLTFGIEVHRFVNESQIKMDVSLWNAVIGLYAKCGI 260
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
++YA + ++ + SMI GY + G + +A F + W A+ SG V+
Sbjct: 261 LDYARELFEEMPEKDGITYCSMISGYMVHGFVNQAMDLFREQERPRLPTWNAVISGLVQN 320
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
E D+ + G + + L +L + + L GKEIH Y +R + +
Sbjct: 321 NRQEGAVDIFRA-MQSHGCRPNTVTLASILPVFSHFSTLKGGKEIHGYAIRNTYDRNIYV 379
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+ ++D Y+KCG + A+++F R L+ + +I+ YA HG A+ LF EML GI
Sbjct: 380 ATAIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVHGDANVALSLFYEMLTNGI 439
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
+PD VTF ++L+A H G ++ K FN + +Y I P +HYACM+ + RA +L A+
Sbjct: 440 QPDQVTFTSVLAACAHSGELDEAWKIFNVLLPEYGIQPLVEHYACMVGVLSRAGKLSDAV 499
Query: 550 EFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEG 609
EF+ +P E A + G+ LN + + EL ++L +E N YV +AN+Y+ G
Sbjct: 500 EFISKMPLEPTAKVWGALLNGASVAGDVELGKYVFDRLFEIEPENTGNYVIMANLYSQSG 559
Query: 610 NWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELY 669
W + IR M+ ++ + G SW+ + F S +T +Y +L G +
Sbjct: 560 RWKDADTIRDLMKEVRLKKIPGNSWIETSGGMQRFCXRH-SSVRTPEVYGMLEGLLGLVK 618
Query: 670 E 670
E
Sbjct: 619 E 619
Score = 45.4 bits (106), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 65/168 (38%), Gaps = 4/168 (2%)
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD 457
L+ C GK++HA ++ V D L S L+ YSK G++ A +F ++
Sbjct: 9 LIQHCTDHLFFRVGKQLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVFGKIPRKN 68
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKG---IKPDAVTFVAILSAFRHCGSVEMGEK 514
+ +N + Y H + LF ++ +KPD T L A S K
Sbjct: 69 IFSWNALFISYTLHNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCSLKALASLFSNSGLAK 128
Query: 515 YFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAV 562
+S + + +I Y R ++L A +P E D V
Sbjct: 129 EVHSFILRRGLEYDIFVVNALITFYSRCDELVLARIMFDRMP-ERDTV 175
>gi|115487922|ref|NP_001066448.1| Os12g0233200 [Oryza sativa Japonica Group]
gi|77553539|gb|ABA96335.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113648955|dbj|BAF29467.1| Os12g0233200 [Oryza sativa Japonica Group]
Length = 704
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 159/473 (33%), Positives = 256/473 (54%), Gaps = 4/473 (0%)
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
+++ NA+V ++ A K F PE D VSW TL+ GY + G A+E +LF RM
Sbjct: 177 SVLVGNALVHFYANHKSLDDAGKVFDEMPE-RDVVSWTTLVDGYARAGLADEAWRLFCRM 235
Query: 251 GE-NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
G+R N T +A+SA + + +H +V + G+ + + + +VD++ KC
Sbjct: 236 VVVGGMRPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGKCGC 295
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
+ YA + V++ +S +SM+ Y+ G++E A + F + +NVV W+ + + Y +
Sbjct: 296 VRYAREVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQL 355
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHA-YILRMGVQMDKK 428
E L E + GV LV +L ACA L G+ I+ YI+ + +
Sbjct: 356 NQPEEAVWLFREMIAA-GVDPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVN 414
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
L + L+DM++KCG++ A +F ER++V +N MI +A HG E+AI LFE++ +
Sbjct: 415 LGNALIDMFAKCGDVGEASKLFDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFEQLKGEN 474
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
I PD +TF+ +L++ H G V G +YF M Y+I P +HYACMIDL G+ LE+A
Sbjct: 475 IVPDQITFLGLLASCSHSGLVSEGRRYFKEMEMFYRIEPRVEHYACMIDLLGKVGLLEEA 534
Query: 549 IEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAE 608
E + +P E D G+ LN CR++ N E+ +KL+ L+ ++ YV ++ +YA++
Sbjct: 535 FEVARGMPMEADEAGWGALLNACRMHGNVEIGACVADKLVELDPSDSGIYVLMSQIYASK 594
Query: 609 GNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
W ++ +R MR + GCS + VE + H F V DVSH + IYS L
Sbjct: 595 NKWDQVKMLRMTMRDRGVKKNPGCSSIEVEGKFHDFLVADVSHACSEEIYSAL 647
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 131/543 (24%), Positives = 237/543 (43%), Gaps = 72/543 (13%)
Query: 13 HVQAIKAGLT-LTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHD 71
H A+K G + + N L+H Y+ H L ++ K+FDEM
Sbjct: 165 HCAALKCGFVGESVLVGNALVHFYANHKSLDDAGKVFDEM-------------------- 204
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
P +D+V++ +++ GY A G +A +LF M +R + T+ +
Sbjct: 205 -----------PERDVVSWTTLVDGYARA-GLADEAWRLFCRMVVVG-GMRPNAVTLVAA 251
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
++ ++ + FG LH ++ + S ++L+DM+ KC C A VF+G E +
Sbjct: 252 VSAIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGKCGCVRYAREVFDG-MEVKD 310
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
+ S +MV A + G++E A + F P N VSW+ +I+ Y Q EE + LF M
Sbjct: 311 VYSWTSMVNAYAKCGDLESAEQLFKDMPRRN-VVSWSCMIAAYSQLNQPEEAVWLFREMI 369
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF-----VSSGIVDVYCK 306
GV + T S LSAC L + ++ W+ +N ++SN + + ++D++ K
Sbjct: 370 AAGVDPIDATLVSVLSACAQLGCL----DLGRWIYENYIVSNKIGLTVNLGNALIDMFAK 425
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
C ++ A + RN S ++MI+ +++ G EEA R F+ L +N+V F G
Sbjct: 426 CGDVGEASKLFDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFEQLKGENIVPDQITFLGL 485
Query: 367 VKAQNCEAL-------FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
+ + + L F + F E V ++ LLG L +E
Sbjct: 486 LASCSHSGLVSEGRRYFKEMEMFYRIEPRVEHYACMIDLLGKVGLL------EEAFEVAR 539
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLV---LYNVMIACYAHHGHEEK 476
M ++ D+ L++ GN+ + +E D +Y +M YA ++
Sbjct: 540 GMPMEADEAGWGALLNACRMHGNVEIGACVADKLVELDPSDSGIYVLMSQIYASKNKWDQ 599
Query: 477 AILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMI 536
+L M ++G+K + C S+E+ K+ + + AD + + Y+ +
Sbjct: 600 VKMLRMTMRDRGVKKNP-----------GCSSIEVEGKFHDFLVADVSHACSEEIYSALK 648
Query: 537 DLY 539
++Y
Sbjct: 649 NIY 651
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 128/246 (52%), Gaps = 8/246 (3%)
Query: 9 ALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIK 68
++ H + G+ + N L+ ++ K +R +R++FD M ++V+SW ++++A K
Sbjct: 264 GIMLHKYVTEGGVARSVNLDNALVDMFGKCGCVRYAREVFDGMEVKDVYSWTSMVNAYAK 323
Query: 69 SHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
DL+ A LF P +++V+++ M+ Y E +A+ LF EM +A + + T+
Sbjct: 324 CGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPE-EAVWLFREMIAAG--VDPIDATL 380
Query: 129 TSTLNLCVKLLNVGFGRQLHA-FMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
S L+ C +L + GR ++ ++V + ++LIDM++KC EA ++F+
Sbjct: 381 VSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNLGNALIDMFAKCGDVGEASKLFDEMA 440
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELN---DAVSWNTLISGYVQNGDAEEGL 244
E N++S N M+ A G+ E A++ F + N D +++ L++ +G EG
Sbjct: 441 ER-NVVSWNTMIMAHAVHGQSEEAIRLFEQLKGENIVPDQITFLGLLASCSHSGLVSEGR 499
Query: 245 KLFVRM 250
+ F M
Sbjct: 500 RYFKEM 505
>gi|8671867|gb|AAF78430.1|AC018748_9 Contains similarity to glycerine-rich protein from Nicotiana glauca
gb|AF151215 and contains multiple PPR PF|01535 repeats
[Arabidopsis thaliana]
Length = 816
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 193/675 (28%), Positives = 329/675 (48%), Gaps = 48/675 (7%)
Query: 14 VQAIKAGLTLTTITT-----NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIK 68
Q + L TT +T N I ++++ L+E+ +F +M R++ SW +ISA +
Sbjct: 34 TQKTRNFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAE 93
Query: 69 SHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
+ + +A +FD P + +YN+M+ I + A +LF ++ E
Sbjct: 94 NGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIP---------EKNA 144
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSND-ASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
S + + G + +T A + L+ Y + + EA RVF+G
Sbjct: 145 VSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMA 204
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
+ ++S ++MV C+ G + A F R E N ++W +I GY + G E+G LF
Sbjct: 205 VK-EVVSCSSMVHGYCKMGRIVDARSLFDRMTERN-VITWTAMIDGYFKAGFFEDGFGLF 262
Query: 248 VRMGENG-VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
+RM + G V+ N +T A AC + +IH V + L + F+ + ++ +Y K
Sbjct: 263 LRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSK 322
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL---F 363
M A+++ + ++S S +S+I G + + EA F+ + K++V WT + F
Sbjct: 323 LGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGF 382
Query: 364 SGYVKAQNCEALFDLLSE------------FVT---------------KEGVVTDALILV 396
SG + C LF ++ E FV+ ++ V ++
Sbjct: 383 SGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFS 442
Query: 397 ILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER 456
+L A A A L G +IH +++M + D + ++LV MY KCGN A IF E
Sbjct: 443 SVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEP 502
Query: 457 DLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYF 516
++V YN MI+ Y+++G +KA+ LF + G +P+ VTF+A+LSA H G V++G KYF
Sbjct: 503 NIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYF 562
Query: 517 NSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRN 576
SM + Y I P DHYACM+DL GR+ L+ A + ++P + + + GS L+ + +
Sbjct: 563 KSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLR 622
Query: 577 AELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVY 636
+LA A +KL+ LE ++ YV L+ +Y+ G + RI + + + G SW+
Sbjct: 623 VDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWII 682
Query: 637 VEHEIHIFTVGDVSH 651
++ E+H F GD S
Sbjct: 683 LKGEVHNFLAGDESQ 697
>gi|225440783|ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570 [Vitis vinifera]
Length = 561
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 181/582 (31%), Positives = 266/582 (45%), Gaps = 81/582 (13%)
Query: 57 FSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEAD-ALKLFIEMQ 115
F + ++ C + S+F+ V +N+ + GY +E Y + LFI M+
Sbjct: 58 FIISQFLTLCNSLSNFSYTTSVFNGVSSPSTVLWNTYIKGY--SENYSVSLTVSLFIRMK 115
Query: 116 SADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRC 175
+D D+FT S + C K+ V G H V+ F ++SLID+Y KC
Sbjct: 116 RSDA--VPDKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGGDVFVMTSLIDLYGKC-- 171
Query: 176 YEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYV 235
GE+ A K F E N VSW +I+GY
Sbjct: 172 ------------------------------GEILCARKVFDEMGERN-VVSWTAMIAGYA 200
Query: 236 QNGDAEEGLKLFVRMGE-NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
D E KLF M E N V WN
Sbjct: 201 SFSDLVEARKLFDEMPEKNAVSWN------------------------------------ 224
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
I+ Y KC ++ A M RN S ++MI GY+ G+M AR F+ E+
Sbjct: 225 ----AIISGYVKCGDLRSARKMFDEMPHRNVVSFTTMIDGYAKSGDMASARFVFEEAPER 280
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
+VV W+AL SGYV+ + E ++ V D I+V L+ AC+ +L K +
Sbjct: 281 DVVAWSALISGYVQNGQPNEAVKIFLEMCSRN-VKPDEFIMVSLMSACSQMGSLELAKWV 339
Query: 415 HAYILRMGVQMDKK-LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH 473
Y+ + + + + +I+ L+DM +KCG+M A +F+ +RDL+ Y M+ + HG
Sbjct: 340 DDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCSMMQGLSIHGC 399
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA 533
+A+ LF ML +G+ PD V F IL+A G V+ G YF SM DY I P DHYA
Sbjct: 400 GPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESMKTDYSIVPSPDHYA 459
Query: 534 CMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGN 593
CM+DL GRA +L++A E +KS+P E A G+ L C+L+ + EL ++L LE
Sbjct: 460 CMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGACKLHCDIELGEVVADQLFELEPQ 519
Query: 594 NKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWV 635
N YV L+N+YAA W ++ +R +MR + GCSW+
Sbjct: 520 NAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKIPGCSWI 561
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 139/337 (41%), Gaps = 99/337 (29%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNV-------- 56
+KE + H A++ G+ LI +Y K + +RK+FDEM ERNV
Sbjct: 138 GVKEGVAFHGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIA 197
Query: 57 -----------------------FSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSM 93
SWN IIS +K DL+ AR +FD PH+++V++ +M
Sbjct: 198 GYASFSDLVEARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNVVSFTTM 257
Query: 94 LCGYINA------------------------------EGYEADALKLFIEMQSADEHIRM 123
+ GY + G +A+K+F+EM S +++
Sbjct: 258 IDGYAKSGDMASARFVFEEAPERDVVAWSALISGYVQNGQPNEAVKIFLEMCS--RNVKP 315
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDA-SGFAVSSLIDMYSKCRCYEEACRV 182
DEF + S ++ C ++ ++ + + ++ K+S D +++LIDM +KC
Sbjct: 316 DEFIMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKC--------- 366
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
G M+ A K F P+ D +S+ +++ G +G +
Sbjct: 367 -----------------------GSMDRATKLFEEMPK-RDLISYCSMMQGLSIHGCGPQ 402
Query: 243 GLKLFVRMGENGVRWNEHTFASALSAC--CGLRNVKC 277
+ LF RM G+ ++ F L+AC GL + C
Sbjct: 403 AVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGC 439
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 163/427 (38%), Gaps = 97/427 (22%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + I+ GL +Q + + + + + +F+ + + WNT I
Sbjct: 45 HARIIRKGLHQDHFIISQFLTLCNSLSNFSYTTSVFNGVSSPSTVLWNTYIK-------- 96
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEAD-ALKLFIEMQSADEHIRMDEFTVTST 131
GY +E Y + LFI M+ +D D+FT S
Sbjct: 97 -----------------------GY--SENYSVSLTVSLFIRMKRSDA--VPDKFTYPSL 129
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE--- 188
+ C K+ V G H V+ F ++SLID+Y KC A +VF+ E
Sbjct: 130 IKACSKVCGVKEGVAFHGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNV 189
Query: 189 ---------------------------EVNLISKNAMVAACCREGEMEMALKTFWRQPEL 221
E N +S NA+++ + G++ A K F P
Sbjct: 190 VSWTAMIAGYASFSDLVEARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEMPHR 249
Query: 222 N------------------------------DAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
N D V+W+ LISGYVQNG E +K+F+ M
Sbjct: 250 NVVSFTTMIDGYAKSGDMASARFVFEEAPERDVVAWSALISGYVQNGQPNEAVKIFLEMC 309
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL-ISNPFVSSGIVDVYCKCENM 310
V+ +E S +SAC + +++ AK + +V K+ + + V + ++D+ KC +M
Sbjct: 310 SRNVKPDEFIMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSM 369
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
+ A + R+ S SM+ G S+ G +A F + + + F+ + A
Sbjct: 370 DRATKLFEEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTAC 429
Query: 371 NCEALFD 377
+ L D
Sbjct: 430 SRAGLVD 436
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 115/254 (45%), Gaps = 12/254 (4%)
Query: 317 LLLKGV-RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEAL 375
++ KG+ ++ F IS + + N F+ ++ + V+W GY + +
Sbjct: 48 IIRKGLHQDHFIISQFLTLCNSLSNFSYTTSVFNGVSSPSTVLWNTYIKGYSENYSVSLT 107
Query: 376 FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVD 435
L + + V D L+ AC+ + G H +R GV D ++++L+D
Sbjct: 108 VSLFIR-MKRSDAVPDKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGGDVFVMTSLID 166
Query: 436 MYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVT 495
+Y KCG + A +F ER++V + MIA YA +A LF+EM EK +AV+
Sbjct: 167 LYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDLVEARKLFDEMPEK----NAVS 222
Query: 496 FVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSI 555
+ AI+S + CG + K F+ M +S + MID Y ++ + A +
Sbjct: 223 WNAIISGYVKCGDLRSARKMFDEMPHRNVVS-----FTTMIDGYAKSGDMASARFVFEEA 277
Query: 556 PTEEDAVILGSFLN 569
P E D V + ++
Sbjct: 278 P-ERDVVAWSALIS 290
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 4/148 (2%)
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD 457
LL AC + L +++HA I+R G+ D +IS + + + N +Y +F
Sbjct: 31 LLKACTTTSTL---EQVHARIIRKGLHQDHFIISQFLTLCNSLSNFSYTTSVFNGVSSPS 87
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFN 517
VL+N I Y+ + + LF M PD T+ +++ A V+ G +
Sbjct: 88 TVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGVAFHG 147
Query: 518 SMTADYKISPETDHYACMIDLYGRANQL 545
S + + +IDLYG+ ++
Sbjct: 148 S-AVRCGVGGDVFVMTSLIDLYGKCGEI 174
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 183/654 (27%), Positives = 301/654 (46%), Gaps = 112/654 (17%)
Query: 13 HVQAIKAGLTL-TTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHD 71
H A++ GL + L+H Y + +R++ + FDEM R+V +WN ++S ++
Sbjct: 91 HACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNAR 150
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
+A LF G + EG DA+ TV+S
Sbjct: 151 AAEAVGLF----------------GRMVMEGVAGDAV------------------TVSSV 176
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L +CV L + +H + VK D F +++ID+Y K EE +VF+G +
Sbjct: 177 LPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSR-- 234
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
D V+WN++ISG+ Q G +++F M
Sbjct: 235 -------------------------------DLVTWNSIISGHEQGGQVASAVEMFCGMR 263
Query: 252 ENGVRWNEHT---FASALSAC---CGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
++GV + T ASA++ C CG R+V C W + + + N IVD+Y
Sbjct: 264 DSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGN-----AIVDMYA 318
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
K + A+ M VR++ S +++I GY G EA +D +
Sbjct: 319 KLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHM-------------- 364
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
Q E L + FV+ +L A + AL G +HA ++ G+ +
Sbjct: 365 ----QKHEGLKPIQGTFVS-------------VLPAYSHLGALQQGTRMHALSIKTGLNL 407
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
D + + ++D+Y+KCG + A ++F+ R +N +I+ HGH KA+ LF +M
Sbjct: 408 DVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQ 467
Query: 486 EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQL 545
++GI PD VTFV++L+A H G V+ G +FN M Y I P HYACM+D++GRA QL
Sbjct: 468 QEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQL 527
Query: 546 EKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVY 605
+ A +F++++P + D+ I G+ L CR++ N E+ A + L L+ N YV ++N+Y
Sbjct: 528 DDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMY 587
Query: 606 AAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVS--HPKTNAI 657
A G W + +R +R + G S + V+ +++F G+ HP+ I
Sbjct: 588 AKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQMNIHPQHEEI 641
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 130/547 (23%), Positives = 225/547 (41%), Gaps = 142/547 (25%)
Query: 9 ALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIK 68
AL H+ A+K GL N +I +Y K +L E RK+FD M R++ +WN+IIS
Sbjct: 189 ALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISG--- 245
Query: 69 SHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
H+ G A A+++F M+ D + D T+
Sbjct: 246 ---------------HEQ--------------GGQVASAVEMFCGMR--DSGVSPDVLTL 274
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASG-FAVSSLIDMYSKCRCYEEACRVFEGCT 187
S + + ++ GR +H +MV+ D A ++++DMY+K E A R+F+
Sbjct: 275 LSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMP 334
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
+ DAVSWNTLI+GY+QNG A E + ++
Sbjct: 335 ---------------------------------VRDAVSWNTLITGYMQNGLASEAIHVY 361
Query: 248 VRMGEN-GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
M ++ G++ + TF S L A L ++ +H+ +K GL + +V + ++D+Y K
Sbjct: 362 DHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAK 421
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
C G ++EA F+ ++ W A+ SG
Sbjct: 422 C-------------------------------GKLDEAMLLFEQTPRRSTGPWNAVISGV 450
Query: 367 -VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI-LRMGVQ 424
V +AL L S+ + +EG+ D + V LL AC+ + G+ + G++
Sbjct: 451 GVHGHGAKAL-SLFSQ-MQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIK 508
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
K + +VDM+ + G + A F+ +
Sbjct: 509 PIAKHYACMVDMFGRAGQLDDA----------------------------------FDFI 534
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE-TDHYACMIDLYGRAN 543
IKPD+ + A+L A R G+VEMG+ ++ +++ P+ +Y M ++Y +
Sbjct: 535 RNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNL---FELDPKNVGYYVLMSNMYAKVG 591
Query: 544 QLEKAIE 550
+ + E
Sbjct: 592 KWDGVDE 598
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 79/208 (37%), Gaps = 37/208 (17%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L++ H +IK GL L +I +Y+K L E+ LF++ P R+ WN +IS
Sbjct: 390 LQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISG 449
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
+ G+ A AL LF +MQ E I D
Sbjct: 450 --------------------------------VGVHGHGAKALSLFSQMQQ--EGISPDH 475
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFA--VSSLIDMYSKCRCYEEACRVF 183
T S L C V GR M++T+ A + ++DM+ + ++A
Sbjct: 476 VTFVSLLAACSHAGLVDQGRNFFN-MMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFI 534
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMA 211
+ + A++ AC G +EM
Sbjct: 535 RNMPIKPDSAIWGALLGACRIHGNVEMG 562
>gi|51535392|dbj|BAD37262.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|51535558|dbj|BAD37476.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 908
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 190/643 (29%), Positives = 310/643 (48%), Gaps = 76/643 (11%)
Query: 26 ITTNQLIHIYSK---HNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSS 82
++ N L+ YS + L +R+LFDEMP+R+V +WNT++ A + + +AR LFD
Sbjct: 99 VSWNTLLAAYSASPHPDHLAAARRLFDEMPQRDVVTWNTLLGAYARRGLMDEARRLFDEM 158
Query: 83 PHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE---HIRMDEFTVTSTLNLCVKLL 139
P ++ ++N+M+ G+ A G AL +F M + D + FT L+ +LL
Sbjct: 159 PQRNAASWNTMVTGFF-AAGQVVKALDVFDAMPAKDSASLSTMVSGFTKNGMLHEAEELL 217
Query: 140 NVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMV 199
++L T D + A ++LI Y + + +A R+F+ M+
Sbjct: 218 T----KRLSV----TDMDKAVDAYNTLIVAYGQAGRFSDAKRLFD-------------MI 256
Query: 200 AACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNE 259
+ M + K F R + VSWN+++ Y++ GD LF M +
Sbjct: 257 PKGQYQHNM-LKRKGFER-----NVVSWNSMMICYIKAGDVCSARALFNEMPD------- 303
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLL 319
K++ SW N +IS Y + +M +E +
Sbjct: 304 -------------------KDLVSW---NTMISG----------YTQASDMKESEKLFWE 331
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLL 379
++ S + +I G+ +G E AR FD + E+ + W + SGY K N + L
Sbjct: 332 MPDPDTVSWNLIIQGFMQKGEAEHARGFFDRMPERGTISWNTMISGYEKNGNYISSVKLF 391
Query: 380 SEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
S+ + + G + D +L ACA L G +IH + + V D + + L+ MYS+
Sbjct: 392 SKML-EVGEIPDRHTFSSVLAACASIPMLGLGAQIHQLVEKSFVP-DTAISNALITMYSR 449
Query: 440 CGNMTYAEIIF-QNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVA 498
CG + AE IF Q ++DLV +N +I CY HHG KA+ LF+EM + P +TFV+
Sbjct: 450 CGALNDAEAIFKQMHTKKDLVSWNALIGCYEHHGRATKALQLFKEMRRAKVMPTHITFVS 509
Query: 499 ILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE 558
+LSA + G V G F++M +Y I +HYA +++L GR QL+ A+E + S+P
Sbjct: 510 LLSACVNAGLVSEGRMVFDTMVHEYGIVARIEHYAALVNLIGRHGQLDDALEVINSMPMA 569
Query: 559 EDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIR 618
D + G+FL C +N LA A ++L + ++ A YV + N++A EG W +R
Sbjct: 570 PDRSVWGAFLGACTAKKNEPLAQMAAKELSTINPDSSAPYVLIHNLHAHEGKWGSAAVVR 629
Query: 619 KQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
++M + G SW+ +E ++H+F GD HP I+SVL
Sbjct: 630 EEMERQGIYKQPGYSWIDLEGKMHVFISGDTWHPNAQEIFSVL 672
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 135/591 (22%), Positives = 227/591 (38%), Gaps = 143/591 (24%)
Query: 24 TTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII---SACIKSHDLKQARSLFD 80
+ +T N L+ ++ R +R+ FD MP R+ SWNT++ SA L AR LFD
Sbjct: 66 SVVTWNSLLAGLARRPDARAAREFFDAMPVRDAVSWNTLLAAYSASPHPDHLAAARRLFD 125
Query: 81 SSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLN 140
P +D+VT+N++L Y G +A +LF EM + T VK L+
Sbjct: 126 EMPQRDVVTWNTLLGAYAR-RGLMDEARRLFDEMPQRNAASWNTMVTGFFAAGQVVKALD 184
Query: 141 V-----------------GFGRQ--LH---AFMVK----TSNDASGFAVSSLIDMYSKCR 174
V GF + LH + K T D + A ++LI Y +
Sbjct: 185 VFDAMPAKDSASLSTMVSGFTKNGMLHEAEELLTKRLSVTDMDKAVDAYNTLIVAYGQAG 244
Query: 175 CYEEACRVFEGCTE-------------EVNLISKNAMVAACCREG--------------- 206
+ +A R+F+ + E N++S N+M+ + G
Sbjct: 245 RFSDAKRLFDMIPKGQYQHNMLKRKGFERNVVSWNSMMICYIKAGDVCSARALFNEMPDK 304
Query: 207 ----------------EMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
+M+ + K FW P+ D VSWN +I G++Q G+AE F RM
Sbjct: 305 DLVSWNTMISGYTQASDMKESEKLFWEMPD-PDTVSWNLIIQGFMQKGEAEHARGFFDRM 363
Query: 251 GENG-VRWN------------------------------EHTFASALSACCGLRNVKCAK 279
E G + WN HTF+S L+AC + +
Sbjct: 364 PERGTISWNTMISGYEKNGNYISSVKLFSKMLEVGEIPDRHTFSSVLAACASIPMLGLGA 423
Query: 280 EIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQG 339
+IH V K+ + + +S+ ++ +Y +C +N AE++
Sbjct: 424 QIHQLVEKS-FVPDTAISNALITMYSRCGALNDAEAIF---------------------- 460
Query: 340 NMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILL 399
+ H T+K++V W AL Y L E + + V+ + V LL
Sbjct: 461 ----KQMH----TKKDLVSWNALIGCYEHHGRATKALQLFKE-MRRAKVMPTHITFVSLL 511
Query: 400 GACALQAALHPGKEI-HAYILRMGVQMDKKLISTLVDMYSKCGNMTYA-EIIFQNFIERD 457
AC + G+ + + G+ + + LV++ + G + A E+I + D
Sbjct: 512 SACVNAGLVSEGRMVFDTMVHEYGIVARIEHYAALVNLIGRHGQLDDALEVINSMPMAPD 571
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD-AVTFVAILSAFRHCG 507
++ + +E A + +E+ I PD + +V I + H G
Sbjct: 572 RSVWGAFLGACTAKKNEPLAQMAAKEL--STINPDSSAPYVLIHNLHAHEG 620
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 118/284 (41%), Gaps = 67/284 (23%)
Query: 18 KAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQ--- 74
+ G ++ N ++ Y K + +R LF+EMP++++ SWNT+IS ++ D+K+
Sbjct: 268 RKGFERNVVSWNSMMICYIKAGDVCSARALFNEMPDKDLVSWNTMISGYTQASDMKESEK 327
Query: 75 ----------------------------ARSLFDSSPHKDLVTYNSMLCGYINAEGYEAD 106
AR FD P + +++N+M+ GY G
Sbjct: 328 LFWEMPDPDTVSWNLIIQGFMQKGEAEHARGFFDRMPERGTISWNTMISGY-EKNGNYIS 386
Query: 107 ALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSL 166
++KLF +M E D T +S L C + +G G Q+H + K+ + + ++L
Sbjct: 387 SVKLFSKMLEVGEIP--DRHTFSSVLAACASIPMLGLGAQIHQLVEKSFVPDTAIS-NAL 443
Query: 167 IDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVS 226
I MYS+C +A +F+ + +L+S
Sbjct: 444 ITMYSRCGALNDAEAIFKQMHTKKDLVS-------------------------------- 471
Query: 227 WNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACC 270
WN LI Y +G A + L+LF M V TF S LSAC
Sbjct: 472 WNALIGCYEHHGRATKALQLFKEMRRAKVMPTHITFVSLLSACV 515
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 95/221 (42%), Gaps = 16/221 (7%)
Query: 339 GNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVIL 398
G ARR FD+L ++VV W +L +G + + A + ++ V + L+
Sbjct: 50 GRYGAARRLFDALPARSVVTWNSLLAGLARRPDARAAREFFDAMPVRDAVSWNTLL---- 105
Query: 399 LGACALQAALHPGKEIHAYILRMGVQMDKKLI---STLVDMYSKCGNMTYAEIIFQNFIE 455
A A+ HP + A R+ +M ++ + +TL+ Y++ G M A +F +
Sbjct: 106 ---AAYSASPHP--DHLAAARRLFDEMPQRDVVTWNTLLGAYARRGLMDEARRLFDEMPQ 160
Query: 456 RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKY 515
R+ +N M+ + G KA+ +F+ M K D+ + ++S F G + E+
Sbjct: 161 RNAASWNTMVTGFFAAGQVVKALDVFDAMPAK----DSASLSTMVSGFTKNGMLHEAEEL 216
Query: 516 FNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIP 556
+ + D Y +I YG+A + A IP
Sbjct: 217 LTKRLSVTDMDKAVDAYNTLIVAYGQAGRFSDAKRLFDMIP 257
>gi|326504202|dbj|BAJ90933.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 634
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 168/590 (28%), Positives = 283/590 (47%), Gaps = 36/590 (6%)
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
L AR +FD P D YNS++ Y N+ G +AL L ++ I +EFT+
Sbjct: 57 LCHARRMFDRVPDPDRFAYNSLIRAYSNS-GCPQEALCLHRDVLR--RGILPNEFTLPFV 113
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L C + H +K Y + +VF G
Sbjct: 114 LKACSRARAAEHALATHGVAIKLG--------------YVR--------QVFVG------ 145
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
NA++ + G + + + F + VSWNT+I G Q G+ E LF M
Sbjct: 146 ----NALLHSSASAGSLRDSRRLFAEMAPHRNVVSWNTMIGGCAQAGETSEACALFREMR 201
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
GV + TF S L C N++ + +H +L +G + + + +VD+Y KC ++
Sbjct: 202 RQGVLADVFTFVSLLLVCSKEGNLEVGRLVHCHMLASGSRVDLILGNALVDMYGKCGDLW 261
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
A + ++N S +SM+ + G+++ AR F+ + E+N++ W A+ S YV+
Sbjct: 262 MAHRCFDVMPIKNVVSWTSMLCALAKHGSVDAARDWFEQMPERNIISWNAMISCYVQGGR 321
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
L + + G+ D + L +L L G+ IH YI +++
Sbjct: 322 FPETLGLYNR-MKSLGLTPDEVTLAGVLSVHGQNGDLASGRMIHCYIQDSFSDPGVTVLN 380
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
+L+DMY++CG + + +F ++ + +NV+I A HG ++A++ F M+ P
Sbjct: 381 SLIDMYARCGQVDTSISLFTEMPNKNTISWNVIIGALAMHGRAQEAVMFFRAMVSDAFSP 440
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
D +TFV +LSA H G +E G+ YF +M Y + PE +HYACM+DL GR L KA++
Sbjct: 441 DEITFVGLLSACSHGGLLEDGQYYFKAMRHIYNVKPEVEHYACMVDLLGRHGHLAKAVDL 500
Query: 552 MKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNW 611
+K +P + D V+ G+ + CR++ + E+ A ++LL LEG N +V ++N+ W
Sbjct: 501 IKDMPMKPDVVVWGALIGACRIHGHVEIGKLAIKQLLELEGINGGLFVLISNLLYETRQW 560
Query: 612 AEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+M R+RK MR + G S + + + IH F V D+ H ++ IY+ +
Sbjct: 561 EDMKRLRKLMRDRGTKKDMGVSSIEINNSIHEFGVEDIRHESSSQIYAAV 610
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 128/490 (26%), Positives = 218/490 (44%), Gaps = 75/490 (15%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEM-PERNVFSWN 60
R+ + AL H AIK G N L+H + LR+SR+LF EM P RNV SWN
Sbjct: 119 RARAAEHALATHGVAIKLGYVRQVFVGNALLHSSASAGSLRDSRRLFAEMAPHRNVVSWN 178
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
T+I C ++ G ++A LF EM+ +
Sbjct: 179 TMIGGCAQA--------------------------------GETSEACALFREMRR--QG 204
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
+ D FT S L +C K N+ GR +H M+ + + ++L+DMY KC A
Sbjct: 205 VLADVFTFVSLLLVCSKEGNLEVGRLVHCHMLASGSRVDLILGNALVDMYGKCGDLWMAH 264
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
R F+ N++S +M+ A + G ++ A F + PE N +SWN +IS YVQ G
Sbjct: 265 RCFD-VMPIKNVVSWTSMLCALAKHGSVDAARDWFEQMPERN-IISWNAMISCYVQGGRF 322
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVS--S 298
E L L+ RM G+ +E T A LS ++ + IH ++ + S+P V+ +
Sbjct: 323 PETLGLYNRMKSLGLTPDEVTLAGVLSVHGQNGDLASGRMIHCYIQDS--FSDPGVTVLN 380
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
++D+Y +C ++ + S+ +N+ S + +I ++ G +EA V+
Sbjct: 381 SLIDMYARCGQVDTSISLFTEMPNKNTISWNVIIGALAMHGRAQEA-----------VMF 429
Query: 359 WTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
+ A+ S + D + V LL AC+ L G+ +
Sbjct: 430 FRAMVS---------------------DAFSPDEITFVGLLSACSHGGLLEDGQYYFKAM 468
Query: 419 LRM-GVQMDKKLISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
+ V+ + + + +VD+ + G++ A ++I ++ D+V++ +I HGH E
Sbjct: 469 RHIYNVKPEVEHYACMVDLLGRHGHLAKAVDLIKDMPMKPDVVVWGALIGACRIHGHVEI 528
Query: 477 AILLFEEMLE 486
L +++LE
Sbjct: 529 GKLAIKQLLE 538
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 168/411 (40%), Gaps = 75/411 (18%)
Query: 198 MVAACC----REGEMEM--ALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
+VA+ C R G++ + A + F R P+ D ++N+LI Y +G +E L L +
Sbjct: 41 LVASYCALSGRAGDVALCHARRMFDRVPD-PDRFAYNSLIRAYSNSGCPQEALCLHRDVL 99
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
G+ NE T L AC R + A H +K G + FV + +
Sbjct: 100 RRGILPNEFTLPFVLKACSRARAAEHALATHGVAIKLGYVRQVFVGNAL----------- 148
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL-TEKNVVVWTALFSGYVKAQ 370
+ +S S G++ ++RR F + +NVV W + G +A
Sbjct: 149 ----------LHSSAS----------AGSLRDSRRLFAEMAPHRNVVSWNTMIGGCAQAG 188
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
L E + ++GV+ D V LL C+ + L G+ +H ++L G ++D L
Sbjct: 189 ETSEACALFRE-MRRQGVLADVFTFVSLLLVCSKEGNLEVGRLVHCHMLASGSRVDLILG 247
Query: 431 STLVDMYSKCGNMTYAEII-------------------------------FQNFIERDLV 459
+ LVDMY KCG++ A F+ ER+++
Sbjct: 248 NALVDMYGKCGDLWMAHRCFDVMPIKNVVSWTSMLCALAKHGSVDAARDWFEQMPERNII 307
Query: 460 LYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSM 519
+N MI+CY G + + L+ M G+ PD VT +LS G + G + +
Sbjct: 308 SWNAMISCYVQGGRFPETLGLYNRMKSLGLTPDEVTLAGVLSVHGQNGDLASG-RMIHCY 366
Query: 520 TADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDA---VILGSF 567
D P +ID+Y R Q++ +I +P + VI+G+
Sbjct: 367 IQDSFSDPGVTVLNSLIDMYARCGQVDTSISLFTEMPNKNTISWNVIIGAL 417
>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
Length = 1133
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 178/635 (28%), Positives = 319/635 (50%), Gaps = 53/635 (8%)
Query: 50 EMPERNVFSWNT------IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGY 103
++P++ WN +IS+ + D A +F ++ + +NS + + ++ G
Sbjct: 448 KLPQK----WNPDAAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGS 503
Query: 104 EADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV 163
L++F E+ + + D + L C +++++ G ++H ++K D +
Sbjct: 504 LHIVLEVFKELHG--KGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLR 561
Query: 164 SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELND 223
+L++ Y +C E+A +VF EM PE
Sbjct: 562 CALMNFYGRCWGLEKANQVFH------------------------EMP------NPE--- 588
Query: 224 AVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCG-LRNVKCAKEIH 282
A+ WN I +Q+ ++G++LF +M + ++ T L A L + KE H
Sbjct: 589 ALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQASISELGFLNMGKETH 648
Query: 283 SWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNME 342
+VL+NG + +V + ++D+Y K ++ A+++ RN F+ +S++ GYS +G E
Sbjct: 649 GYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFE 708
Query: 343 EARRHFDSLTEK----NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVIL 398
+A R + + ++ ++V W + SGY + ++ + +EGV+ ++ + L
Sbjct: 709 DALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAFFAQ-MQQEGVMPNSASITCL 767
Query: 399 LGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDL 458
L ACA + L GKEIH +R G D + + L+DMYSK ++ A +F+ + L
Sbjct: 768 LRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTL 827
Query: 459 VLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNS 518
+N MI +A G ++AI +F EM + G+ PDA+TF A+LSA ++ G + G KYF+S
Sbjct: 828 ASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDS 887
Query: 519 MTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAE 578
M DY+I P +HY CM+DL GRA L++A + + ++P + DA I G+ L CR+++N +
Sbjct: 888 MITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLK 947
Query: 579 LAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGC-SWVYV 637
A A + L +LE NN A Y+ + N+Y+ W +M +R+ M G G R SW+ +
Sbjct: 948 FAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELM-GAAGVRNRQVWSWIQI 1006
Query: 638 EHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
+H+F+ + HP IY L E+ ++
Sbjct: 1007 NQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLG 1041
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 162/374 (43%), Gaps = 47/374 (12%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R +++ + H IK G L L++ Y + L ++ ++F EMP WN
Sbjct: 535 RVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNE 594
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
I ++S L++ LF M ++ AE
Sbjct: 595 AIILNLQSEKLQKGVELF-----------RKMQFSFLKAE-------------------- 623
Query: 122 RMDEFTVTSTLNLCVKLLNVGF---GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEE 178
T T L + +GF G++ H ++++ D + +SLIDMY K
Sbjct: 624 -----TATIVRVLQASISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTS 678
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPE---LNDAVSWNTLISGYV 235
A VF+ N+ + N++V+ +G E AL+ + + D V+WN +ISGY
Sbjct: 679 AQAVFDNMKNR-NIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYA 737
Query: 236 QNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF 295
G +E L F +M + GV N + L AC L ++ KEIH ++NG I + F
Sbjct: 738 MWGCGKEALAFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVF 797
Query: 296 VSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE-- 353
V++ ++D+Y K ++ A + + S + MI+G+++ G +EA F+ + +
Sbjct: 798 VATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVG 857
Query: 354 --KNVVVWTALFSG 365
+ + +TAL S
Sbjct: 858 VGPDAITFTALLSA 871
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 112/261 (42%), Gaps = 40/261 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H ++ G LI +Y K++ L ++ +FD M RN+F+WN+++S
Sbjct: 648 HGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMF 707
Query: 73 KQARSLFDSSPHK----DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
+ A L + + DLVT+N M+ GY G +AL F +MQ E + + ++
Sbjct: 708 EDALRLLNQMEKEGIKPDLVTWNGMISGYA-MWGCGKEALAFFAQMQQ--EGVMPNSASI 764
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE 188
T L C L + G+++H ++ F ++LIDMYSK + A +VF
Sbjct: 765 TCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVF----- 819
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
R+ + SWN +I G+ G +E + +F
Sbjct: 820 ----------------------------RRIQNKTLASWNCMIMGFAIFGLGKEAISVFN 851
Query: 249 RMGENGVRWNEHTFASALSAC 269
M + GV + TF + LSAC
Sbjct: 852 EMQKVGVGPDAITFTALLSAC 872
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 87/208 (41%), Gaps = 3/208 (1%)
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY-V 367
M +A+ + L + + ++I Y G+ A F +N + W + +
Sbjct: 440 KMMHAQMIKLPQKWNPDAAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKS 499
Query: 368 KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDK 427
A + + ++ E K GVV D+ + + L C + G EIH +++ G +D
Sbjct: 500 SAGSLHIVLEVFKELHGK-GVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDV 558
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
L L++ Y +C + A +F + +L+N I +K + LF +M
Sbjct: 559 YLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFS 618
Query: 488 GIKPDAVTFVAILSA-FRHCGSVEMGEK 514
+K + T V +L A G + MG++
Sbjct: 619 FLKAETATIVRVLQASISELGFLNMGKE 646
>gi|12324033|gb|AAG51982.1|AC024260_20 hypothetical protein; 70922-66390 [Arabidopsis thaliana]
Length = 839
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 193/675 (28%), Positives = 329/675 (48%), Gaps = 48/675 (7%)
Query: 14 VQAIKAGLTLTTITT-----NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIK 68
Q + L TT +T N I ++++ L+E+ +F +M R++ SW +ISA +
Sbjct: 34 TQKTRNFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAE 93
Query: 69 SHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
+ + +A +FD P + +YN+M+ I + A +LF ++ E
Sbjct: 94 NGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIP---------EKNA 144
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSND-ASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
S + + G + +T A + L+ Y + + EA RVF+G
Sbjct: 145 VSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMA 204
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
+ ++S ++MV C+ G + A F R E N ++W +I GY + G E+G LF
Sbjct: 205 VK-EVVSCSSMVHGYCKMGRIVDARSLFDRMTERN-VITWTAMIDGYFKAGFFEDGFGLF 262
Query: 248 VRMGENG-VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
+RM + G V+ N +T A AC + +IH V + L + F+ + ++ +Y K
Sbjct: 263 LRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSK 322
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL---F 363
M A+++ + ++S S +S+I G + + EA F+ + K++V WT + F
Sbjct: 323 LGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGF 382
Query: 364 SGYVKAQNCEALFDLLSE------------FVT---------------KEGVVTDALILV 396
SG + C LF ++ E FV+ ++ V ++
Sbjct: 383 SGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFS 442
Query: 397 ILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER 456
+L A A A L G +IH +++M + D + ++LV MY KCGN A IF E
Sbjct: 443 SVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEP 502
Query: 457 DLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYF 516
++V YN MI+ Y+++G +KA+ LF + G +P+ VTF+A+LSA H G V++G KYF
Sbjct: 503 NIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYF 562
Query: 517 NSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRN 576
SM + Y I P DHYACM+DL GR+ L+ A + ++P + + + GS L+ + +
Sbjct: 563 KSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLR 622
Query: 577 AELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVY 636
+LA A +KL+ LE ++ YV L+ +Y+ G + RI + + + G SW+
Sbjct: 623 VDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWII 682
Query: 637 VEHEIHIFTVGDVSH 651
++ E+H F GD S
Sbjct: 683 LKGEVHNFLAGDESQ 697
>gi|147862014|emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
Length = 822
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 189/665 (28%), Positives = 308/665 (46%), Gaps = 71/665 (10%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L E H I G I +L+ YS NLL ++ + + + F WN +IS
Sbjct: 189 SLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNILHPFPWNLLIS 248
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
+ +++ G+ AL + +M + IR D
Sbjct: 249 SYVRN--------------------------------GFCQKALSAYKQM--VKKGIRPD 274
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
FT S L C + L++GFG+++H + + S ++LI MY KC A +F+
Sbjct: 275 NFTYPSVLKACGEELDLGFGKEVHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFD 334
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTF---WRQPELNDAVSWNTLISGYVQNGDAE 241
E + +S N+M++ G A + F W + + + WNT+ GY++ G+ +
Sbjct: 335 KIPER-DAVSWNSMISVYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYK 393
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
L+L +M + G + L AC + + K KEIHS+ +++ V + ++
Sbjct: 394 GALELLSQMRKXGSHLDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNSLI 453
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
+Y +C+++ +A Y L F + K+++ W +
Sbjct: 454 TMYSRCKDLKHA---------------------YLL----------FQLMEAKSLISWNS 482
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+ SG E LL E + G+ + + + +L CA A L GKE H Y+ R
Sbjct: 483 IISGCCHMDRSEEASFLLREMLL-SGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRR 541
Query: 422 GVQMDKKLI-STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
D L+ + LVDMY++ G + A +F ERD + Y MIA Y G + A+ L
Sbjct: 542 EDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKL 601
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
FEEM IKPD +T +A+LSA H G V G+ F M + Y ++P +H+ACM DL+G
Sbjct: 602 FEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFG 661
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQ 600
RA L KA E ++++P + + + + CR++RN E+ A EKLL ++ N YV
Sbjct: 662 RAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPENPGYYVL 721
Query: 601 LANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSV 660
+AN+YAA G W ++ ++R MR + + GC+WV V F V D S+ + IY +
Sbjct: 722 IANMYAAAGCWNKLAKVRXFMRDLGVRKAPGCAWVDVGTGFSPFLVDDTSNANADEIYPL 781
Query: 661 LAIFT 665
L T
Sbjct: 782 LEGLT 786
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/399 (21%), Positives = 164/399 (41%), Gaps = 116/399 (29%)
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG----------IVDVYCKCEN 309
H +S LS+C ++++ +++H ++ G +P + +VD + EN
Sbjct: 175 HPISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITEN 234
Query: 310 MN----YAESMLLLKGVRNSF--------------------------------------- 326
N + ++L+ VRN F
Sbjct: 235 SNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFG 294
Query: 327 -----SISSMIVGYSLQ------------GNMEEARRHFDSLTEKNVVVWTALFS----- 364
SI++ + +SL G + AR FD + E++ V W ++ S
Sbjct: 295 KEVHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASM 354
Query: 365 ------------------------------GYVKAQNCEALFDLLSEFVTKEGVVTDALI 394
GY++ N + +LLS+ + K G D++
Sbjct: 355 GMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQ-MRKXGSHLDSVA 413
Query: 395 LVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFI 454
L+I LGAC+ GKEIH++ +R + ++L+ MYS+C ++ +A ++FQ
Sbjct: 414 LIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNSLITMYSRCKDLKHAYLLFQLME 473
Query: 455 ERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
+ L+ +N +I+ H E+A L EML GI+P+ VT ++L +++ G++
Sbjct: 474 AKSLISWNSIISGCCHMDRSEEASFLLREMLLSGIEPNYVTIASVLPLCARVANLQHGKE 533
Query: 515 YFNSMT--ADYKISPETDH---YACMIDLYGRANQLEKA 548
+ MT D+K DH + ++D+Y R+ ++ +A
Sbjct: 534 FHCYMTRREDFK-----DHLLLWNALVDMYARSGKVLEA 567
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 111/232 (47%), Gaps = 15/232 (6%)
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD 457
LL +C +L G+++H +I+ +G + L+ LV YS + A +I +N
Sbjct: 180 LLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNILH 239
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCG---SVEMGEK 514
+N++I+ Y +G +KA+ +++M++KGI+PD T+ ++L A CG + G++
Sbjct: 240 PFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKA---CGEELDLGFGKE 296
Query: 515 YFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNV---- 570
S+ A +I + +I +YG+ ++ A + IP E DAV S ++V
Sbjct: 297 VHESINAS-RIKWSLIVHNALISMYGKCGKVGIARDLFDKIP-ERDAVSWNSMISVYASM 354
Query: 571 CRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMR 622
N EL G + + L N + +A Y GN+ + QMR
Sbjct: 355 GMWNEAFELFGSMWAEDIEL---NIIIWNTIAGGYLRTGNYKGALELLSQMR 403
>gi|347954456|gb|AEP33728.1| chlororespiratory reduction 21, partial [Brassica oleracea]
Length = 643
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 189/700 (27%), Positives = 326/700 (46%), Gaps = 112/700 (16%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H K+GL + L +Y K +L ++RK+FDE+PERNV +W
Sbjct: 7 HGYVAKSGLDDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAW------------- 53
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
N+++ GY+ G +A++L +M+ +E + TV++ L
Sbjct: 54 ------------------NALMVGYVQ-NGMNEEAIRLMCDMR--EEGVEPTRVTVSTCL 92
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ + V G+ HA V + +S+++ Y K + A VF+ +
Sbjct: 93 SASANMGGVEEGKXSHALAVVNGLELDNILGTSILNFYCKVGLIDYAEMVFD------RM 146
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
I K D V+WN LISGYVQ G E+ +++ M
Sbjct: 147 IGK---------------------------DVVTWNLLISGYVQQGLVEDAIRMCQLMRL 179
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM-- 310
++++ T ++ +S +N K KE+ + +++ S+ ++S VD+Y KC ++
Sbjct: 180 EKLKFDCVTLSTLMSTAARTQNSKLGKEVQCYCIRHSFESDIVLASAAVDMYAKCGSIVD 239
Query: 311 ---------------------NYAESMLLLKGVRNSF-----SISSMIVGYSL------- 337
YAES L + +R + S+ ++ ++L
Sbjct: 240 AKKVFDSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSLLR 299
Query: 338 QGNMEEARRHFDSLTE----KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDAL 393
G ++EA+ F + +V WT + +G V E L + + + G+ +
Sbjct: 300 NGQVDEAKEMFLQMQSSGIVPTIVSWTTMMNGLVXNGCSEEAIHYLRK-MQESGMRPNVF 358
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST-LVDMYSKCGNMTYAEIIFQN 452
+ + L ACA A+LH G+ +H YI+R + I T LVDMY+KCG+++ AE +F+
Sbjct: 359 SITVALSACANLASLHFGRSVHGYIIRNRLHSSSVSIETSLVDMYAKCGDISKAEKVFRR 418
Query: 453 FIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMG 512
+ +L LYN MI+ YA +G+ E+A+ L+ + + GIKPD +TF ILSA H G +
Sbjct: 419 KLFSELPLYNAMISAYALYGNVEEAMALYGSLEDMGIKPDNITFTNILSACNHAGDINQA 478
Query: 513 EKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCR 572
+ F+ M + + + P +HY M+DL A + EKA+ M+ +P E DA ++ S L C
Sbjct: 479 IEIFSDMVSKHGVKPCLEHYGLMVDLLASAGETEKALRLMEEMPYEPDARMIQSLLATCN 538
Query: 573 LNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGC 632
EL ++LL E +N YV ++N YA EG+W E+ ++R+ M+ + GC
Sbjct: 539 KEHKTELVEYLSKQLLESEPDNSGNYVTISNAYAGEGSWDEVVKMREMMKAKGLKKQPGC 598
Query: 633 SWVYVEH----EIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
SW+ V+ + +F D +H + N I +LA+ ++
Sbjct: 599 SWIRVKREEEEXVQVFVANDKTHLRNNEIRRMLALLLXDM 638
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 188/414 (45%), Gaps = 66/414 (15%)
Query: 142 GFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAA 201
GFGR +H ++ K+ D F SSL DMY KC ++A +VF+
Sbjct: 1 GFGRGVHGYVAKSGLDDCVFVASSLADMYGKCGVLDDARKVFD----------------- 43
Query: 202 CCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHT 261
PE N V+WN L+ GYVQNG EE ++L M E GV T
Sbjct: 44 ---------------EIPERN-VVAWNALMVGYVQNGMNEEAIRLMCDMREEGVEPTRVT 87
Query: 262 FASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKG 321
++ LSA + V+ K H+ + NGL + + + I++ YCK ++YAE +
Sbjct: 88 VSTCLSASANMGGVEEGKXSHALAVVNGLELDNILGTSILNFYCKVGLIDYAEMV----- 142
Query: 322 VRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSE 381
FD + K+VV W L SGYV+ E + +
Sbjct: 143 --------------------------FDRMIGKDVVTWNLLISGYVQQGLVEDAIR-MCQ 175
Query: 382 FVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
+ E + D + L L+ A GKE+ Y +R + D L S VDMY+KCG
Sbjct: 176 LMRLEKLKFDCVTLSTLMSTAARTQNSKLGKEVQCYCIRHSFESDIVLASAAVDMYAKCG 235
Query: 442 NMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
++ A+ +F + +++DL+L+N ++A YA G +A+ LF EM + + P+ +T+ I+
Sbjct: 236 SIVDAKKVFDSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNVITWNLIIL 295
Query: 502 AFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSI 555
+ G V+ ++ F M + I P + M++ E+AI +++ +
Sbjct: 296 SLLRNGQVDEAKEMFLQMQSS-GIVPTIVSWTTMMNGLVXNGCSEEAIHYLRKM 348
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 124/535 (23%), Positives = 238/535 (44%), Gaps = 92/535 (17%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
++E H A+ GL L I +++ Y K L+ + +FD M ++V +WN +IS
Sbjct: 101 VEEGKXSHALAVVNGLELDNILGTSILNFYCKVGLIDYAEMVFDRMIGKDVVTWNLLIS- 159
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
GY+ +G DA+++ M+ E ++ D
Sbjct: 160 ------------------------------GYVQ-QGLVEDAIRMCQLMRL--EKLKFDC 186
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
T+++ ++ + N G+++ + ++ S ++ S+ +DMY+KC +A +VF+
Sbjct: 187 VTLSTLMSTAARTQNSKLGKEVQCYCIRHSFESDIVLASAAVDMYAKCGSIVDAKKVFDS 246
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFW----------------------RQPELND 223
++ +LI N ++AA G AL+ F+ R ++++
Sbjct: 247 TVQK-DLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVDE 305
Query: 224 A----------------VSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALS 267
A VSW T+++G V NG +EE + +M E+G+R N + ALS
Sbjct: 306 AKEMFLQMQSSGIVPTIVSWTTMMNGLVXNGCSEEAIHYLRKMQESGMRPNVFSITVALS 365
Query: 268 ACCGLRNVKCAKEIHSWVLKNGLISNPF-VSSGIVDVYCKCENMNYAESMLLLKGVRNSF 326
AC L ++ + +H ++++N L S+ + + +VD+Y KC +++ AE + K
Sbjct: 366 ACANLASLHFGRSVHGYIIRNRLHSSSVSIETSLVDMYAKCGDISKAEKVFRRKLFSELP 425
Query: 327 SISSMIVGYSLQGNMEEARRHFDSLTEKNV----VVWTALFSGYVKAQNCEALFDLLSEF 382
++MI Y+L GN+EEA + SL + + + +T + S A + ++ S+
Sbjct: 426 LYNAMISAYALYGNVEEAMALYGSLEDMGIKPDNITFTNILSACNHAGDINQAIEIFSDM 485
Query: 383 VTKEGVVT----DALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYS 438
V+K GV L++ +L A + AL +E M + D ++I +L+ +
Sbjct: 486 VSKHGVKPCLEHYGLMVDLLASAGETEKALRLMEE-------MPYEPDARMIQSLLATCN 538
Query: 439 KCGNMTYAEIIFQNFIERDLV---LYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
K E + + +E + Y + YA G ++ + + E M KG+K
Sbjct: 539 KEHKTELVEYLSKQLLESEPDNSGNYVTISNAYAGEGSWDEVVKMREMMKAKGLK 593
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 170/558 (30%), Positives = 267/558 (47%), Gaps = 69/558 (12%)
Query: 106 DALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS 165
+AL L+ +M ++ + + FT C L G QLH ++KT + F +S
Sbjct: 39 EALNLYCQMLASGD--SPNAFTFPFAFKSCASLSLPLAGSQLHGHVIKTGCEPEPFVQTS 96
Query: 166 LIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAV 225
LI MY KC A +VF+ NL AV
Sbjct: 97 LISMYCKCSTIASARKVFDENHHSRNL-------------------------------AV 125
Query: 226 SWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWV 285
+N LI+GY N + + LF +M + GV N T + C G ++ +H+
Sbjct: 126 CYNALIAGYSLNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACS 185
Query: 286 LKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEAR 345
++ GL + V + ++ +Y +C G+++ AR
Sbjct: 186 VRFGLDGDLSVGNCLLTMYVRC-------------------------------GSVDFAR 214
Query: 346 RHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLS--EFVTKEGVVTDALILVILLGACA 403
+ FD + EK ++ W A+ SGY + + DL EF G+V D + LV +L +CA
Sbjct: 215 KLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFT---GIVPDPVTLVGVLSSCA 271
Query: 404 LQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNV 463
A G+E+ I G + L + L++MY++CGN+ A IF E++++ +
Sbjct: 272 HLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMTEKNVISWTA 331
Query: 464 MIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADY 523
+IA Y HG E A+ LF+EM+ PD FV++LSA H G E G YF +M DY
Sbjct: 332 IIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLYYFTAMERDY 391
Query: 524 KISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEA 583
+ P +HY+C++DL GRA +LE+A + + S+ E D + G+ L C+++RN ELA A
Sbjct: 392 GLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIHRNVELAELA 451
Query: 584 EEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHI 643
EK++ E N YV L+N+++ GN + R+R MR K + GCS+V + IH+
Sbjct: 452 FEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRERKLKKEPGCSYVEYQGRIHL 511
Query: 644 FTVGDVSHPKTNAIYSVL 661
F GD +HP+ IY +L
Sbjct: 512 FLAGDRTHPQAQEIYHML 529
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 166/363 (45%), Gaps = 40/363 (11%)
Query: 222 NDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEI 281
N SWN + + +E L L+ +M +G N TF A +C L ++
Sbjct: 19 NTTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQL 78
Query: 282 HSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNM 341
H V+K G PFV + ++ +YCKC +
Sbjct: 79 HGHVIKTGCEPEPFVQTSLISMYCKCS-------------------------------TI 107
Query: 342 EEARRHFD-SLTEKNVVV-WTALFSGY-VKAQNCEALFDLLSEFVTKEGVVTDALILVIL 398
AR+ FD + +N+ V + AL +GY + ++ +A+ LL + KEGV +A+ ++ L
Sbjct: 108 ASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSDAV--LLFRQMRKEGVSVNAVTMLGL 165
Query: 399 LGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDL 458
+ CA L G +HA +R G+ D + + L+ MY +CG++ +A +F E+ L
Sbjct: 166 IPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGL 225
Query: 459 VLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNS 518
+ +N MI+ YA +G + L+ +M GI PD VT V +LS+ H G+ G +
Sbjct: 226 ITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQR 285
Query: 519 MT-ADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNA 577
+ + + +P + +I++Y R L KA + TE++ + + + ++
Sbjct: 286 IELSGFGFNPFLKN--ALINMYARCGNLVKARAIFDGM-TEKNVISWTAIIAGYGMHGQG 342
Query: 578 ELA 580
ELA
Sbjct: 343 ELA 345
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 108/463 (23%), Positives = 198/463 (42%), Gaps = 75/463 (16%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPH-KDL-VTYNSMLCGYINAEGYEADALKL 110
E F ++IS K + AR +FD + H ++L V YN+++ GY + +DA+ L
Sbjct: 88 EPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGY-SLNSRFSDAVLL 146
Query: 111 FIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMY 170
F +M+ E + ++ T+ + +C +++GFG LHA V+ D + L+ MY
Sbjct: 147 FRQMRK--EGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLTMY 204
Query: 171 SKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTL 230
+C + A ++F+G E+ ++WN +
Sbjct: 205 VRCGSVDFARKLFDGMPEK---------------------------------GLITWNAM 231
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL 290
ISGY QNG A L L+ +M G+ + T LS+C L +E+ + +G
Sbjct: 232 ISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGF 291
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
NPF+ + ++++Y +C N+ A ++ +N S +++I GY + G E A + FD
Sbjct: 292 GFNPFLKNALINMYARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDE 351
Query: 351 LTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHP 410
+ + + D V +L AC+
Sbjct: 352 MISSD--------------------------------ELPDGAAFVSVLSACSHAGLTEK 379
Query: 411 GKEIHAYILR-MGVQMDKKLISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMIACY 468
G + R G+Q + S +VD+ + G + A ++I +E D ++ ++
Sbjct: 380 GLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGAC 439
Query: 469 AHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS-AFRHCGSVE 510
H + E A L FE+++E +P + + +LS F G++E
Sbjct: 440 KIHRNVELAELAFEKVIE--FEPTNIGYYVLLSNIFSEAGNME 480
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 106/241 (43%), Gaps = 38/241 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +++ GL N L+ +Y + + +RKLFD MPE+ + +WN +IS
Sbjct: 182 HACSVRFGLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMIS-------- 233
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
GY G L L+ +M+ I D T+ L
Sbjct: 234 -----------------------GYAQ-NGLAGHVLDLYRKMEFTG--IVPDPVTLVGVL 267
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C L GR++ + + + F ++LI+MY++C +A +F+G TE+ N+
Sbjct: 268 SSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMTEK-NV 326
Query: 193 ISKNAMVAACCREGEMEMALKTF---WRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
IS A++A G+ E+A++ F EL D ++ +++S G E+GL F
Sbjct: 327 ISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLYYFTA 386
Query: 250 M 250
M
Sbjct: 387 M 387
>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 174/527 (33%), Positives = 270/527 (51%), Gaps = 13/527 (2%)
Query: 154 TSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALK 213
S DA F SSL+ Y + +A V +G ++ +A++AA G+ E A
Sbjct: 51 VSRDA--FVASSLLHAYLRFGATADARSVLDGMPHR-TVVGWSALIAAHASHGDAEGAWG 107
Query: 214 TFWRQPELN---DAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACC 270
R + ++WN L+SG ++G A + + VRM G + + ALSA
Sbjct: 108 LLERMRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVG 167
Query: 271 GLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISS 330
+ +V +++H +V+K G + V++ ++D+Y KC + + + S ++
Sbjct: 168 DVGDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNA 227
Query: 331 MIVGYSLQGNMEEARRHFDSLT----EKNVVVWTALFSGYVK-AQNCEALFDLLSEFVTK 385
++ G S + EA R F E NVV WT++ + V+ ++ EA+ DL E +
Sbjct: 228 LVAGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAV-DLFRE-MQS 285
Query: 386 EGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTY 445
EG+ +++ + +L A A AAL G+ H + LR G D + S LVDMY+KCG +
Sbjct: 286 EGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRD 345
Query: 446 AEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRH 505
A +IF+ R++V +N MI YA HG E A+ LF M KPD VTF +L A
Sbjct: 346 ARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQ 405
Query: 506 CGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILG 565
G E G YFN M + ISP +HYACM+ L GRA +L+ A + + +P E D I G
Sbjct: 406 AGWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWG 465
Query: 566 SFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMK 625
S L CR++ N LA A E L +LE N YV L+N+YA++ W + R+R M+ +
Sbjct: 466 SLLGSCRVHGNVVLAEVAAENLFQLEPENAGNYVLLSNIYASKKMWDGVNRLRDMMKTVG 525
Query: 626 GNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
+ GCSW+ +++++H+ GD SHP AI L T E+ +
Sbjct: 526 LKKEKGCSWIEIKNKVHMLLAGDSSHPMMAAITEKLKHLTMEMRRLG 572
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 123/453 (27%), Positives = 204/453 (45%), Gaps = 30/453 (6%)
Query: 20 GLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLF 79
G++ + L+H Y + ++R + D MP R V W+ +I+A D + A L
Sbjct: 50 GVSRDAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLL 109
Query: 80 D----SSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLC 135
+ +++T+N ++ G +N G DA+ + M E D V+ L+
Sbjct: 110 ERMRSDGVEPNVITWNGLVSG-LNRSGRARDAVLALVRMHG--EGFLPDATGVSCALSAV 166
Query: 136 VKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISK 195
+ +V G QLH ++VK ++LIDMY KC +E RVF+ + +++ S
Sbjct: 167 GDVGDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDE-SSHMDVASC 225
Query: 196 NAMVAACCREGEMEMALKTF----WRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
NA+VA R ++ AL+ F R ELN VSW ++++ VQNG E + LF M
Sbjct: 226 NALVAGLSRNAQVSEALRLFREFVGRGIELN-VVSWTSIVACCVQNGRDLEAVDLFREMQ 284
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
G+ N T L A + + + H + L+ G + +V S +VD+Y KC +
Sbjct: 285 SEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVR 344
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT----EKNVVVWTALFSGYV 367
A + RN S ++MI GY++ G E A R F S+ + ++V +T +
Sbjct: 345 DARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACS 404
Query: 368 KAQNCEALFDLLSEFVTKEGV---VTDALILVILLGACALQAALHPGKEIHAY--ILRMG 422
+A E +E K G+ + +V LLG GK AY I +M
Sbjct: 405 QAGWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLG--------RAGKLDDAYDIINQMP 456
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIE 455
+ D + +L+ GN+ AE+ +N +
Sbjct: 457 FEPDGCIWGSLLGSCRVHGNVVLAEVAAENLFQ 489
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 6/125 (4%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +++ G + L+ +Y+K +R++R +F+ MP RNV SWN +I +
Sbjct: 315 HCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEA 374
Query: 73 KQA----RSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE-HIRMDEFT 127
+ A RS+ S DLVT+ +L G + G+ + F EMQ RM+ +
Sbjct: 375 ENAVRLFRSMQSSKEKPDLVTFTCVL-GACSQAGWTEEGRSYFNEMQHKHGISPRMEHYA 433
Query: 128 VTSTL 132
TL
Sbjct: 434 CMVTL 438
>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 755
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 184/675 (27%), Positives = 308/675 (45%), Gaps = 116/675 (17%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACI 67
EA + H +K G L+++YSK ++ + K+FD +P RNV +W T
Sbjct: 82 EARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTT------ 135
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFT 127
+L GY+ + AL+LFI+M A + +T
Sbjct: 136 -------------------------LLTGYVQ-NSHPLLALQLFIKMLEAGAY--PSNYT 167
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
+ LN C L ++ FG+Q+HA+++K D +SL YSK R E A + F+
Sbjct: 168 LGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFK-II 226
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
+E ++IS +++++CC NG A L F
Sbjct: 227 KEKDVISWTSVISSCC--------------------------------DNGQAARSLSFF 254
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
+ M +G++ NE+T S LSACC + + +IHS +K G S+ + + I+ +Y KC
Sbjct: 255 MDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKC 314
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
G + EA++ F+ + N+V W A+ +G+
Sbjct: 315 -------------------------------GWLIEAQKLFEGMETLNLVTWNAMIAGHA 343
Query: 368 KAQNCE--------------ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
K + A+F L + G+ D +L C+ AL G++
Sbjct: 344 KMMDLAEDDVAAHKSGSTALAMFQKL----YRSGMKPDLFTFSSVLSVCSNLVALEQGEQ 399
Query: 414 IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH 473
IH I++ GV D + + LV MY+KCG++ A F R ++ + MI +A HG
Sbjct: 400 IHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGL 459
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA 533
++A+ LFE+M GIKP+ VTFV +LSA H G + YF M Y I P DH+A
Sbjct: 460 SQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFA 519
Query: 534 CMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGN 593
C+ID+Y R ++E+A + + + E + I + CR + ++L A E+LL+L+
Sbjct: 520 CLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPK 579
Query: 594 NKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPK 653
+ YV L N++ + G W ++ ++RK M+ K + SW+ ++ +++ F D SH +
Sbjct: 580 DVETYVSLLNMHISAGRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQ 639
Query: 654 TNAIYSVLAIFTGEL 668
+ +Y +L E+
Sbjct: 640 SLEMYKLLETVLNEV 654
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 86/180 (47%), Gaps = 2/180 (1%)
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD 457
LL C + + IH +I++ G D +++ LV++YSKCG M A +F N R+
Sbjct: 70 LLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRN 129
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFN 517
+ + ++ Y + H A+ LF +MLE G P T +L+A S+E G K +
Sbjct: 130 VNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFG-KQVH 188
Query: 518 SMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNA 577
+ Y I +T + Y + +LE AI+ K I E+D + S ++ C N A
Sbjct: 189 AYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKII-KEKDVISWTSVISSCCDNGQA 247
>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 635
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 170/538 (31%), Positives = 270/538 (50%), Gaps = 73/538 (13%)
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
V L LC + V + H +++ + ++ LI+ YSKC E A +VF+G
Sbjct: 64 VHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGML 123
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
E VSWNT+I Y +N E L +F
Sbjct: 124 ER---------------------------------SLVSWNTMIGLYTRNRMESEALDIF 150
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKC----AKEIHSWVLKNGLISNPFVSSGIVDV 303
+ M G +++E T +S LSAC V C K++H +K + N +V + ++D+
Sbjct: 151 LEMRNEGFKFSEFTISSVLSAC----GVNCDALECKKLHCLSVKTCIDLNLYVGTALLDL 206
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y KC G +++A + F+S+ +K+ V W+++
Sbjct: 207 YAKC-------------------------------GMIKDAVQVFESMQDKSSVTWSSMV 235
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
+GYV+ +N E LL + + + L ++ AC+ AAL GK++HA I + G
Sbjct: 236 AGYVQNKNYEEAL-LLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGF 294
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
+ + S+ VDMY+KCG++ + IIF E++L L+N +I+ +A H ++ ++LFE+
Sbjct: 295 GSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEK 354
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRAN 543
M + G+ P+ VTF ++LS H G VE G ++F M Y +SP HY+CM+D+ GRA
Sbjct: 355 MQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAG 414
Query: 544 QLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLAN 603
L +A E +KSIP + A I GS L CR+ +N ELA A EKL LE N +V L+N
Sbjct: 415 LLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSN 474
Query: 604 VYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+YAA W E+ + RK +R + G SW+ ++ ++H F+VG+ HP+ I S L
Sbjct: 475 IYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTL 532
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/441 (24%), Positives = 195/441 (44%), Gaps = 102/441 (23%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACI 67
EA CH + I+ L N LI+ YSK + +R++FD M ER++ SWNT+I
Sbjct: 79 EAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIG--- 135
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFT 127
L T N M E++AL +F+EM+ +E + EFT
Sbjct: 136 -------------------LYTRNRM----------ESEALDIFLEMR--NEGFKFSEFT 164
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
++S L+ C + ++LH VKT D + + ++L+D+Y+KC ++A +VFE
Sbjct: 165 ISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ 224
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
++ +V+W+++++GYVQN + EE L L+
Sbjct: 225 DK---------------------------------SSVTWSSMVAGYVQNKNYEEALLLY 251
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
R + N+ T +S + AC L + K++H+ + K+G SN FV+S VD+Y KC
Sbjct: 252 RRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKC 311
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
G++ E+ F + EKN+ +W + SG+
Sbjct: 312 -------------------------------GSLRESYIIFSEVQEKNLELWNTIISGFA 340
Query: 368 KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDK 427
K + + +L E + ++G+ + + LL C + G+ ++R +
Sbjct: 341 KHARPKEVM-ILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFK-LMRTTYGLSP 398
Query: 428 KLI--STLVDMYSKCGNMTYA 446
++ S +VD+ + G ++ A
Sbjct: 399 NVVHYSCMVDILGRAGLLSEA 419
>gi|218190515|gb|EEC72942.1| hypothetical protein OsI_06806 [Oryza sativa Indica Group]
Length = 1030
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 182/623 (29%), Positives = 312/623 (50%), Gaps = 50/623 (8%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
E ++ N +++ K +++ S+F SS D+VT+N+++ GY+ Y + ALKLF
Sbjct: 335 EMDISVSNALMAHYSKVCEMRAVESIFRSSKMGDIVTWNTVIAGYV-MNRYPSRALKLFQ 393
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV-SSLIDMYS 171
+ A + D ++ S L C ++ N+ G ++H ++ + ++ ++L+ YS
Sbjct: 394 GLLFAG--MAPDSVSLISLLTACAQVGNLRVGIRVHGYIFRHPELLQETSLMNALVSFYS 451
Query: 172 KCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLI 231
+C ++ A R F + + +K D+VSWN ++
Sbjct: 452 QCDRFDAAFRSF------ITIQNK---------------------------DSVSWNAIL 478
Query: 232 SGYVQN-GDAEEGLKLFVRMGENGVRWNEHTFAS--ALSACCGLRNVKCAKEIHSWVLKN 288
S + E+ +L M + +W+ T + +S CG++ V+ E H + L+
Sbjct: 479 SACANSEHHIEQFFRLLGEMWHDVTQWDSVTILNIIRMSTFCGIKMVQ---ESHGYSLRV 535
Query: 289 GLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHF 348
G + V++ I+D Y KC ++ AE++ RN + ++MI Y +E+A F
Sbjct: 536 GYTGDSSVANAILDAYAKCGYLHDAETLFRSLAGRNIVTGNTMISCYLKNNCVEDAEMTF 595
Query: 349 DSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAAL 408
+ + EK++ W + Y + C+ F L + + EG+ D + + +L AC +++
Sbjct: 596 NHMAEKDLTTWNLMSRLYAQNDLCDQAFCLFHQ-LQSEGLNPDTISITNILSACIHLSSV 654
Query: 409 HPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACY 468
K+ H Y+LR ++ D L L+D YSKCGN+ A +FQ + +DLV++ MI Y
Sbjct: 655 QLVKQCHGYMLRASLE-DIHLEGALLDAYSKCGNIANAYNLFQVSLHKDLVIFTAMIGAY 713
Query: 469 AHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE 528
A HG EKA+ LF +ML IKPD V A+LSA H G V+ G K F S+ Y + P
Sbjct: 714 AMHGMAEKAVELFSKMLTLDIKPDHVVLTALLSACSHAGLVDAGIKIFKSIREIYGVEPT 773
Query: 529 TDHYACMIDLYGRANQLEKAIEFMKSIPTE-EDAVILGSFLNVCRLNRNAELAGEAEEKL 587
+H ACM+DL R+ +L+ A F +P +A GS L C+++ ++ A ++L
Sbjct: 774 EEHCACMVDLLARSGRLQDAYSFALDMPPHVVNANAWGSLLGACKVHGEVKIGQLAADRL 833
Query: 588 LRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVG 647
+E + YV ++N++AA+ W + +RK M+ + AGCSW+ VE H+F
Sbjct: 834 FSMEAEDIGNYVIMSNIFAADDKWESVEHVRKLMKSKDMKKPAGCSWIEVEKTRHLFVAS 893
Query: 648 DVSHPKTNAIYSVLAIFTGELYE 670
DV H +IY VL G LY+
Sbjct: 894 DVQHQDRFSIYDVL----GSLYQ 912
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 145/618 (23%), Positives = 255/618 (41%), Gaps = 144/618 (23%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H IK GL T++ N L+ +Y+K C S +
Sbjct: 221 HGYVIKTGLEFDTLSGNALVSMYAK----------------------------CGGSIAM 252
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
A F + KD+V++NS++ GY + G +AL LF +M S E + T+ + L
Sbjct: 253 DDAHLAFSTICCKDVVSWNSIIAGY-SENGLFEEALALFGQMIS--EECLPNYSTLANVL 309
Query: 133 NLCVKLLNVG--FGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
C L+ G +G+++H F+V+ E+
Sbjct: 310 PFC-SLVEYGRHYGKEIHGFVVRHG--------------------------------LEM 336
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
++ NA++A + EM A+++ +R ++ D V+WNT+I+GYV N LKLF +
Sbjct: 337 DISVSNALMAHYSKVCEMR-AVESIFRSSKMGDIVTWNTVIAGYVMNRYPSRALKLFQGL 395
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG-LISNPFVSSGIVDVYCKCEN 309
G+ + + S L+AC + N++ +H ++ ++ L+ + + +V Y +C+
Sbjct: 396 LFAGMAPDSVSLISLLTACAQVGNLRVGIRVHGYIFRHPELLQETSLMNALVSFYSQCD- 454
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
+ A R F ++ K+ V W A+ S +
Sbjct: 455 ------------------------------RFDAAFRSFITIQNKDSVSWNAILSACANS 484
Query: 370 Q-NCEALFDLLSEF---VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
+ + E F LL E VT+ VT L ++ + C ++ +E H Y LR+G
Sbjct: 485 EHHIEQFFRLLGEMWHDVTQWDSVT-ILNIIRMSTFCGIKMV----QESHGYSLRVGYTG 539
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
D + + ++D Y+KCG + AE +F++ R++V N MI+CY + E A + F M
Sbjct: 540 DSSVANAILDAYAKCGYLHDAETLFRSLAGRNIVTGNTMISCYLKNNCVEDAEMTFNHMA 599
Query: 486 EK-------------------------------GIKPDAVTFVAILSAFRHCGSVEMGEK 514
EK G+ PD ++ ILSA H SV++ ++
Sbjct: 600 EKDLTTWNLMSRLYAQNDLCDQAFCLFHQLQSEGLNPDTISITNILSACIHLSSVQLVKQ 659
Query: 515 YFNSMTADYKISPETDHY-ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRL 573
M + S E H ++D Y + + A + + +D VI + + +
Sbjct: 660 CHGYM---LRASLEDIHLEGALLDAYSKCGNIANAYNLFQ-VSLHKDLVIFTAMIGAYAM 715
Query: 574 NRNAELAGEAEEKLLRLE 591
+ AE A E K+L L+
Sbjct: 716 HGMAEKAVELFSKMLTLD 733
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/433 (23%), Positives = 188/433 (43%), Gaps = 65/433 (15%)
Query: 142 GFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAA 201
GR LH VK +++DMY + +A VF+
Sbjct: 111 ALGRCLHGLAVKVGYADGAVVAKAVMDMYGRIGSLADAHTVFD----------------- 153
Query: 202 CCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHT 261
EM+ +DAV N LI+ + G + LF M +GV + T
Sbjct: 154 -------EMSC---------SDAVCRNILITASSRAGLYNDVFHLFRAMLASGVDESMPT 197
Query: 262 ---FASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLL 318
A L C LR ++ + IH +V+K GL + + +V +Y KC
Sbjct: 198 AVTVAVVLPVCAKLRVLRAGRSIHGYVIKTGLEFDTLSGNALVSMYAKC----------- 246
Query: 319 LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDL 378
G S+ M++A F ++ K+VV W ++ +GY + E L
Sbjct: 247 ---------------GGSIA--MDDAHLAFSTICCKDVVSWNSIIAGYSENGLFEEALAL 289
Query: 379 LSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYS 438
+ +++E + + + +L ++ H GKEIH +++R G++MD + + L+ YS
Sbjct: 290 FGQMISEECLPNYSTLANVLPFCSLVEYGRHYGKEIHGFVVRHGLEMDISVSNALMAHYS 349
Query: 439 KCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVA 498
K M E IF++ D+V +N +IA Y + + +A+ LF+ +L G+ PD+V+ ++
Sbjct: 350 KVCEMRAVESIFRSSKMGDIVTWNTVIAGYVMNRYPSRALKLFQGLLFAGMAPDSVSLIS 409
Query: 499 ILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE 558
+L+A G++ +G + + ++ ET ++ Y + ++ + A +I
Sbjct: 410 LLTACAQVGNLRVGIRVHGYIFRHPELLQETSLMNALVSFYSQCDRFDAAFRSFITI-QN 468
Query: 559 EDAVILGSFLNVC 571
+D+V + L+ C
Sbjct: 469 KDSVSWNAILSAC 481
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 128/510 (25%), Positives = 208/510 (40%), Gaps = 73/510 (14%)
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSA--DEHIRMDEFTVT 129
L A ++FD D V N ++ A Y D LF M ++ DE + TV
Sbjct: 145 LADAHTVFDEMSCSDAVCRNILITASSRAGLYN-DVFHLFRAMLASGVDESMPT-AVTVA 202
Query: 130 STLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEE 189
L +C KL + GR +H +++KT + + ++L+ MY+KC ++
Sbjct: 203 VVLPVCAKLRVLRAGRSIHGYVIKTGLEFDTLSGNALVSMYAKCGG--------SIAMDD 254
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
+L A CC+ D VSWN++I+GY +NG EE L LF +
Sbjct: 255 AHL----AFSTICCK------------------DVVSWNSIIAGYSENGLFEEALALFGQ 292
Query: 250 MGENGVRWNEHTFASALSACCGLRNVK-CAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
M N T A+ L C + + KEIH +V+++GL + VS+ ++ Y K
Sbjct: 293 MISEECLPNYSTLANVLPFCSLVEYGRHYGKEIHGFVVRHGLEMDISVSNALMAHYSKVC 352
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
M ES+ F S ++V W + +GYV
Sbjct: 353 EMRAVESI-------------------------------FRSSKMGDIVTWNTVIAGYVM 381
Query: 369 AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG-VQMDK 427
+ L + G+ D++ L+ LL ACA L G +H YI R + +
Sbjct: 382 NRYPSRALKLFQGLLFA-GMAPDSVSLISLLTACAQVGNLRVGIRVHGYIFRHPELLQET 440
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMI-ACYAHHGHEEKAILLFEEMLE 486
L++ LV YS+C A F +D V +N ++ AC H E+ L EM
Sbjct: 441 SLMNALVSFYSQCDRFDAAFRSFITIQNKDSVSWNAILSACANSEHHIEQFFRLLGEMWH 500
Query: 487 KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLE 546
+ D+VT + I+ CG + E + S+ Y + ++ ++D Y + L
Sbjct: 501 DVTQWDSVTILNIIRMSTFCGIKMVQESHGYSLRVGY--TGDSSVANAILDAYAKCGYLH 558
Query: 547 KAIEFMKSIPTEEDAVILGSFLNVCRLNRN 576
A +S+ ++ G+ + C L N
Sbjct: 559 DAETLFRSLAGRN--IVTGNTMISCYLKNN 586
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 120/243 (49%), Gaps = 8/243 (3%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +++ G T + N ++ Y+K L ++ LF + RN+ + NT+IS +K++ +
Sbjct: 529 HGYSLRVGYTGDSSVANAILDAYAKCGYLHDAETLFRSLAGRNIVTGNTMISCYLKNNCV 588
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+ A F+ KDL T+N M Y + + A LF ++QS E + D ++T+ L
Sbjct: 589 EDAEMTFNHMAEKDLTTWNLMSRLYAQNDLCD-QAFCLFHQLQS--EGLNPDTISITNIL 645
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C+ L +V +Q H +M++ S + +L+D YSKC A +F+ + +L
Sbjct: 646 SACIHLSSVQLVKQCHGYMLRASLEDIHLE-GALLDAYSKCGNIANAYNLFQVSLHK-DL 703
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELN---DAVSWNTLISGYVQNGDAEEGLKLFVR 249
+ AM+ A G E A++ F + L+ D V L+S G + G+K+F
Sbjct: 704 VIFTAMIGAYAMHGMAEKAVELFSKMLTLDIKPDHVVLTALLSACSHAGLVDAGIKIFKS 763
Query: 250 MGE 252
+ E
Sbjct: 764 IRE 766
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 126/306 (41%), Gaps = 43/306 (14%)
Query: 219 PELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVK-- 276
P L+D + + L+ GD L M G+R N A+A+ + L + +
Sbjct: 50 PALDDRMRCSALLRERAVGGDHYGCTSLLRWMLARGLRPNRLALAAAVKSSSALPDCRGG 109
Query: 277 --CAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVG 334
+ +H +K G V+ ++D+Y +
Sbjct: 110 AALGRCLHGLAVKVGYADGAVVAKAVMDMYGRI--------------------------- 142
Query: 335 YSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTK--EGVVTDA 392
G++ +A FD ++ + V L + +A +F L + + + A
Sbjct: 143 ----GSLADAHTVFDEMSCSDAVCRNILITASSRAGLYNDVFHLFRAMLASGVDESMPTA 198
Query: 393 LILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGN---MTYAEII 449
+ + ++L CA L G+ IH Y+++ G++ D + LV MY+KCG M A +
Sbjct: 199 VTVAVVLPVCAKLRVLRAGRSIHGYVIKTGLEFDTLSGNALVSMYAKCGGSIAMDDAHLA 258
Query: 450 FQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSV 509
F +D+V +N +IA Y+ +G E+A+ LF +M+ + P+ T +L C V
Sbjct: 259 FSTICCKDVVSWNSIIAGYSENGLFEEALALFGQMISEECLPNYSTLANVLP---FCSLV 315
Query: 510 EMGEKY 515
E G Y
Sbjct: 316 EYGRHY 321
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 167/525 (31%), Positives = 271/525 (51%), Gaps = 9/525 (1%)
Query: 152 VKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLI------SKNAMVAACCRE 205
TS +S + + + +C EE R G + LI SK A
Sbjct: 7 TPTSQLSSESNAAQTLHLLQRCSNMEE-LRQIHGQMLKTGLILDEIPASKLLAFCASPNS 65
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASA 265
G + A F R N + WNT+I GY + + EE L L+ M + V N +TF
Sbjct: 66 GSLAYARTVFDRIFRPNTFM-WNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFL 124
Query: 266 LSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNS 325
L AC + + ++IH+ ++K G S + ++ +++VY K ++ A + R++
Sbjct: 125 LKACSSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDT 184
Query: 326 FSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTK 385
S +SMI GY+ G +E A F+ + E+N++ WT++ SG V A + +L T
Sbjct: 185 VSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTA 244
Query: 386 EGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTY 445
G+ D + LV L ACA L GK IHAYI + +++D L L+DMY+KCG++
Sbjct: 245 -GIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEE 303
Query: 446 AEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRH 505
A +F+ E+ + ++ MI+ YA HG +A+ F +M G++P+ +TF IL+A H
Sbjct: 304 AIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSH 363
Query: 506 CGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILG 565
G V + F SM + P +HY CM+DL GRA L++A E ++++P + +A I G
Sbjct: 364 AGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWG 423
Query: 566 SFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMK 625
+ LN C ++ N EL + + L++++ + RY+ LA+++AA G W + R+R+QM+
Sbjct: 424 ALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQG 483
Query: 626 GNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYE 670
++ GCS + V H F GD SHP+ I +L L E
Sbjct: 484 VSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLRE 528
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 119/475 (25%), Positives = 211/475 (44%), Gaps = 75/475 (15%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNL--LRESRKLFDEMPERNVFSW 59
R N++E H Q +K GL L I ++L+ + N L +R +FD + N F W
Sbjct: 27 RCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMW 86
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
NT+I S + P + L+ Y+ ML Y +
Sbjct: 87 NTMIRGYSNSKE-----------PEEALLLYHHML--------YHS-------------- 113
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
+ + +T L C + +Q+HA ++K + + +SL+++YSK + A
Sbjct: 114 -VPHNAYTFPFLLKACSSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSA 172
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
+F+ ++ + +S N+M+ + GE+EMA + F PE N +SW ++ISG V G
Sbjct: 173 RLLFDQ-VDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERN-IISWTSMISGCVGAGK 230
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
+E L LF RM G++ + S L AC L + K IH+++ K+ + +P +
Sbjct: 231 PKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCV 290
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
++D+Y KC G++EEA F + EK V VW
Sbjct: 291 LIDMYAKC-------------------------------GDLEEAIEVFRKMEEKGVSVW 319
Query: 360 TALFSGY-VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
TA+ SGY + + EAL + + GV + + +L AC+ +H K + +
Sbjct: 320 TAMISGYAIHGRGREALEWFMK--MQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESM 377
Query: 419 LRM-GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMI-ACYAH 470
R+ G + + +VD+ + G + AE + +N ++ + ++ ++ AC+ H
Sbjct: 378 ERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIH 432
>gi|356498922|ref|XP_003518295.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Glycine max]
Length = 682
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 178/554 (32%), Positives = 287/554 (51%), Gaps = 26/554 (4%)
Query: 84 HKDLVTYNSMLCGYINAEGYEADALKLFIEM--QSADEHIRMDEFTVTSTLNLCVKLLNV 141
+ D+ Y S I + G L ++ S D H+R + + + K +
Sbjct: 97 YNDIKPYTSFYPVLIKSAGKAGMLLHAYLLKLGHSHDHHVR------NAIMGIYAKYGCI 150
Query: 142 GFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE-EVNLISKNAMVA 200
R+L M D + + +I Y KC +EA R+F E E N+I+ MV
Sbjct: 151 ELARKLFDEM----PDRTAADWNVIISGYWKCGNEKEATRLFCMMGESEKNVITWTTMVT 206
Query: 201 ACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEH 260
+ +E A F PE A SWN ++SGY Q+G A+E ++LF M +G +E
Sbjct: 207 GHAKMRNLETARMYFDEMPERRVA-SWNAMLSGYAQSGAAQETVRLFDDMLSSGNEPDET 265
Query: 261 TFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLK 320
T+ + LS+C L + A+ I + + SN FV + ++D++ KC N+ A+ +
Sbjct: 266 TWVTVLSSCSSLGDPCLAESIVRKLDRMNFRSNYFVKTALLDMHAKCGNLEVAQKIFEQL 325
Query: 321 GV-RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEAL--FD 377
GV +NS + ++MI Y+ G++ AR F+ + E+N V W ++ +GY AQN E+L
Sbjct: 326 GVYKNSVTWNAMISAYARVGDLSLARDLFNKMPERNTVSWNSMIAGY--AQNGESLKAIQ 383
Query: 378 LLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMY 437
L E ++ + D + +V + AC L G + + +++ ++L+ MY
Sbjct: 384 LFKEMISSKDSKPDEVTMVSVFSACGHLGRLGLGNWAVSILHENHIKLSISGYNSLIFMY 443
Query: 438 SKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFV 497
+CG+M A I FQ +DLV YN +I+ A HGH ++I L +M E GI PD +T++
Sbjct: 444 LRCGSMEDARITFQEMATKDLVSYNTLISGLAAHGHGTESIKLMSKMKEDGIGPDRITYI 503
Query: 498 AILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPT 557
+L+A H G +E G K F S+ P+ DHYACMID+ GR +LE+A++ ++S+P
Sbjct: 504 GVLTACSHAGLLEEGWKVFESIKV-----PDVDHYACMIDMLGRVGKLEEAVKLIQSMPM 558
Query: 558 EEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRI 617
E A I GS LN +++ EL A KL ++E +N YV L+N+YA G W ++ ++
Sbjct: 559 EPHAGIYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNYVLLSNIYALAGRWKDVDKV 618
Query: 618 RKQMR--GMKGNRF 629
R +MR G+K F
Sbjct: 619 RDKMRKQGVKKTTF 632
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 144/597 (24%), Positives = 261/597 (43%), Gaps = 117/597 (19%)
Query: 7 KEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPER------------ 54
K ++ H +K G + N ++ IY+K+ + +RKLFDEMP+R
Sbjct: 116 KAGMLLHAYLLKLGHSHDHHVRNAIMGIYAKYGCIELARKLFDEMPDRTAADWNVIISGY 175
Query: 55 ---------------------NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSM 93
NV +W T+++ K +L+ AR FD P + + ++N+M
Sbjct: 176 WKCGNEKEATRLFCMMGESEKNVITWTTMVTGHAKMRNLETARMYFDEMPERRVASWNAM 235
Query: 94 LCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVK 153
L GY + G + ++LF +M S+ DE T + L+ C L + + + +
Sbjct: 236 LSGYAQS-GAAQETVRLFDDMLSSGN--EPDETTWVTVLSSCSSLGDPCLAESIVRKLDR 292
Query: 154 TSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALK 213
+ ++ F ++L+DM++KC E A ++FE N ++ NAM++A R G++ +A
Sbjct: 293 MNFRSNYFVKTALLDMHAKCGNLEVAQKIFEQLGVYKNSVTWNAMISAYARVGDLSLARD 352
Query: 214 TFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM-GENGVRWNEHTFASALSACCGL 272
F + PE N VSWN++I+GY QNG++ + ++LF M + +E T S SAC L
Sbjct: 353 LFNKMPERN-TVSWNSMIAGYAQNGESLKAIQLFKEMISSKDSKPDEVTMVSVFSACGHL 411
Query: 273 RNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFS-ISSM 331
+ N+A S+L ++ S S +S+
Sbjct: 412 GRLGLG--------------------------------NWAVSILHENHIKLSISGYNSL 439
Query: 332 IVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTD 391
I Y G+ME+AR F + K++V + L SG + L+S+ + ++G+ D
Sbjct: 440 IFMYLRCGSMEDARITFQEMATKDLVSYNTLISGLAAHGHGTESIKLMSK-MKEDGIGPD 498
Query: 392 ALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQ 451
+ + +L AC+ HA +L G + +F+
Sbjct: 499 RITYIGVLTACS-----------HAGLLEEGWK------------------------VFE 523
Query: 452 NFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEM 511
+ D+ Y MI G E+A+ L + M ++P A + ++L+A VE+
Sbjct: 524 SIKVPDVDHYACMIDMLGRVGKLEEAVKLIQSM---PMEPHAGIYGSLLNATSIHKQVEL 580
Query: 512 GEKYFNSMTADYKISPE-TDHYACMIDLY---GRANQLEKAIEFMKSIPTEEDAVIL 564
GE + +K+ P + +Y + ++Y GR ++K + M+ ++ I+
Sbjct: 581 GELAAAKL---FKVEPHNSGNYVLLSNIYALAGRWKDVDKVRDKMRKQGVKKTTFIV 634
>gi|357483509|ref|XP_003612041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513376|gb|AES94999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 167/540 (30%), Positives = 272/540 (50%), Gaps = 32/540 (5%)
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
+++ + V T++L + N+G +Q+H ++K VS L+ Y+
Sbjct: 4 LQLLQLNVEQTMSLLERCSNIGELKQIHGQLLKKGTIRHKLTVSRLLTTYA--------- 54
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+ E + ++ MV F R N V WNT+I Y + D
Sbjct: 55 ------SMEFSNLTYARMV---------------FDRISSPN-TVMWNTMIRAYSNSNDP 92
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
EE L L+ +M + + N +TF L AC L + +IH ++K G S + ++ +
Sbjct: 93 EEALLLYHQMLHHSIPHNAYTFPFLLKACSALSALAETHQIHVQIIKRGFGSEVYATNSL 152
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
+ VY ++ A + L R+ S ++MI GY GN+E A + F ++ EKNV+ WT
Sbjct: 153 LRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCGNVEMAYKIFQAMPEKNVISWT 212
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
++ G+V+ + LL + + G+ D + L L ACA AL GK IH YI +
Sbjct: 213 SMIVGFVRTGMHKEALCLLQQMLVA-GIKPDKITLSCSLSACAGLGALEQGKWIHTYIGK 271
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
+++D L L+DMY KCG M A ++F ++ + + +I +A HG +A+
Sbjct: 272 NKIKIDPVLGCALIDMYVKCGEMKKALLVFSKLEKKCVYTWTAIIGGFAVHGKGSEALDW 331
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
F +M + GIKP + TF A+L+A H G VE G+ F SM+ Y + P +HY CM+DL G
Sbjct: 332 FTQMQKAGIKPTSFTFTAVLTACSHTGLVEEGKSLFESMSTFYNMKPVMEHYGCMVDLLG 391
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQ 600
RA L++A EF++S+P + +A I GS LN C L+++ EL E + L+ L+ + RY+
Sbjct: 392 RAGFLKEAKEFVESMPIKPNAAIWGSLLNACHLHKHLELGKEIGKFLIELDPEHDGRYIH 451
Query: 601 LANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSV 660
LA+++AA G W E ++R ++ GCS + + H F G HP +Y +
Sbjct: 452 LASIHAAAGEWDEASQVRSHIKNKGLLNLPGCSTITLNGVAHEFFAGAEPHPHVREMYDM 511
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/469 (23%), Positives = 202/469 (43%), Gaps = 78/469 (16%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNL--LRESRKLFDEMPERNVFSW 59
R N+ E H Q +K G +T ++L+ Y+ L +R +FD + N W
Sbjct: 20 RCSNIGELKQIHGQLLKKGTIRHKLTVSRLLTTYASMEFSNLTYARMVFDRISSPNTVMW 79
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
NT+I A S+D P + L+ Y+ ML
Sbjct: 80 NTMIRAYSNSND-----------PEEALLLYHQML-----------------------HH 105
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
I + +T L C L + Q+H ++K + +A +SL+ +Y+ + A
Sbjct: 106 SIPHNAYTFPFLLKACSALSALAETHQIHVQIIKRGFGSEVYATNSLLRVYAISGSIKSA 165
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
+F+ +++S N M+ + G +EMA K F PE N +SW ++I G+V+ G
Sbjct: 166 HVLFD-LLPSRDIVSWNTMIDGYIKCGNVEMAYKIFQAMPEKN-VISWTSMIVGFVRTGM 223
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
+E L L +M G++ ++ T + +LSAC GL ++ K IH+++ KN + +P +
Sbjct: 224 HKEALCLLQQMLVAGIKPDKITLSCSLSACAGLGALEQGKWIHTYIGKNKIKIDPVLGCA 283
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNS--FSISSMIVGYSLQGNMEEARRHFDSLTEKNVV 357
++D+Y KC M A +L+ + ++ +++I G+++ G EA F + + +
Sbjct: 284 LIDMYVKCGEMKKA--LLVFSKLEKKCVYTWTAIIGGFAVHGKGSEALDWFTQMQKAGIK 341
Query: 358 VWTALFSGYVKA-------QNCEALFDLLS-----------------------------E 381
+ F+ + A + ++LF+ +S E
Sbjct: 342 PTSFTFTAVLTACSHTGLVEEGKSLFESMSTFYNMKPVMEHYGCMVDLLGRAGFLKEAKE 401
Query: 382 FVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
FV + +A I LL AC L L GKEI +++ + + D + I
Sbjct: 402 FVESMPIKPNAAIWGSLLNACHLHKHLELGKEIGKFLIELDPEHDGRYI 450
>gi|147765658|emb|CAN78103.1| hypothetical protein VITISV_043511 [Vitis vinifera]
Length = 1849
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 172/600 (28%), Positives = 306/600 (51%), Gaps = 44/600 (7%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N+++S ++ +++A LF + +DLV++N+++ GY + G AL+LF E S E
Sbjct: 1218 NSLMSFYLRIXQMEKAEFLFRNMKSRDLVSWNAIIAGYA-SNGEWLKALELFSEFISL-E 1275
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV-SSLIDMYSKCRCYEE 178
I+ D T+ S L C + N+ + +H ++++ +V ++L+ Y+KC +
Sbjct: 1276 TIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQA 1335
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
A + F +IS+ D +SWN ++ + ++G
Sbjct: 1336 ALQTFL-------MISRK--------------------------DLISWNAILDAFTESG 1362
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI---SNPF 295
+ L M G+R + T + + + VK KE HS+ ++ GL+ + P
Sbjct: 1363 CETHLVNLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAXPT 1422
Query: 296 VSSGIVDVYCKCENMNYAESML-LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
+ +G++D Y KC NM YA ++ L RN + +SMI GY + ++A F++++E
Sbjct: 1423 LGNGMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVTSSSHDDAYAIFNTMSET 1482
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
++ W + Y + + L E + +G+ D + ++ +L ACA A++H ++
Sbjct: 1483 DLTTWNLMVRVYAENDFPDQALSLFHE-LQGQGMKPDIVTIMSILPACAHMASVHMLRQC 1541
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
H Y++R D +L +DMYSKCG++ A +F + ++DLV++ M+ +A HG
Sbjct: 1542 HGYVIRACFN-DVRLNGAFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMG 1600
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC 534
E+A+ +F MLE G+KPD V A+L A H G V+ G K FNS+ + P + YAC
Sbjct: 1601 EEALRIFSYMLELGVKPDHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYAC 1660
Query: 535 MIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNN 594
++DL R +++ A F+ +P E +A I G+ L CR + EL + L ++E +N
Sbjct: 1661 VVDLLARGGRIKDAYTFVTRMPIEANANIWGTLLGACRTHHEVELGRVVADHLFKIESDN 1720
Query: 595 KARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHI--FTVGDVSHP 652
YV ++N+YAA+ W + IR+ MR + + AGCSW+ V ++ F G+ + P
Sbjct: 1721 IGNYVVMSNLYAADARWDGVMEIRRLMRTRELKKPAGCSWIEVGRRKNMGSFQKGNANAP 1780
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 131/518 (25%), Positives = 228/518 (44%), Gaps = 90/518 (17%)
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFT 127
KS L LF +D V +N +L G + +EA+ ++LF M +E + + T
Sbjct: 1018 KSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNE-AKPNSVT 1076
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
+ L +C +L G+ +H++++K+ ++ A ++LI MY+KC
Sbjct: 1077 IAIVLPVCARLREDA-GKSVHSYVIKSGLESHTLAGNALISMYAKC-------------- 1121
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
L+ +A A + + E D VSWN +I+G+ +N EE KLF
Sbjct: 1122 ---GLVCSDAYAA---------------FNRIEFKDVVSWNAVIAGFSENKFTEEAFKLF 1163
Query: 248 VRMGENGVRWNEHTFASALSACCGLR---NVKCAKEIHSWVLKN-GLISNPFVSSGIVDV 303
M + ++ N T AS L C L + KE+H VL+ L+ + V + ++
Sbjct: 1164 HAMLKGPIQPNYATIASILPVCASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSF 1223
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y + M AE + F ++ +++V W A+
Sbjct: 1224 YLRIXQMEKAEFL-------------------------------FRNMKSRDLVSWNAII 1252
Query: 364 SGYVKAQNCEAL--FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR- 420
+GY A N E L +L SEF++ E + D++ LV +L ACA L K IH YI+R
Sbjct: 1253 AGY--ASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRH 1310
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFI---ERDLVLYNVMIACYAHHGHEEKA 477
G++ D + + L+ Y+KC Y + Q F+ +DL+ +N ++ + G E
Sbjct: 1311 PGLREDTSVGNALLSFYAKC---NYTQAALQTFLMISRKDLISWNAILDAFTESGCETHL 1367
Query: 478 ILLFEEMLEKGIKPDAVTFVAIL---SAFRHCGSVEMGEKY---FNSMTADYKISPETDH 531
+ L ML +GI+PD++T + I+ +A V+ Y F + D P +
Sbjct: 1368 VNLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGD--AXPTLGN 1425
Query: 532 YACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLN 569
M+D Y + ++ A+ S+ + + V S ++
Sbjct: 1426 --GMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMIS 1461
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 114/453 (25%), Positives = 198/453 (43%), Gaps = 74/453 (16%)
Query: 106 DALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS 165
+AL LF+E + + + + L CV + FG LH + +K + +
Sbjct: 952 EALSLFLERVRCSVGYKPNGQILAALLKSCVAXSAIRFGSVLHGYALKLGHVSCQSLCKG 1011
Query: 166 LIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAV 225
L+++Y+K + ++F GEM+ D V
Sbjct: 1012 LLNLYAKSGALDYCNKLF----------------------GEMDQ-----------RDPV 1038
Query: 226 SWNTLISGYV--QNGDAEEGLKLFVRMGE-NGVRWNEHTFASALSACCGLRNVKCAKEIH 282
WN ++SG Q+ +AE ++LF M N + N T A L C LR K +H
Sbjct: 1039 IWNIVLSGLAGFQSHEAEV-MRLFRAMHMVNEAKPNSVTIAIVLPVCARLRE-DAGKSVH 1096
Query: 283 SWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNME 342
S+V+K+GL S+ + ++ +Y KC G+ S
Sbjct: 1097 SYVIKSGLESHTLAGNALISMYAKC-------------GLVCS----------------- 1126
Query: 343 EARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGAC 402
+A F+ + K+VV W A+ +G+ + + E F L + K + + + +L C
Sbjct: 1127 DAYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAML-KGPIQPNYATIASILPVC 1185
Query: 403 AL---QAALHPGKEIHAYIL-RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDL 458
A A GKE+H ++L RM + D +I++L+ Y + M AE +F+N RDL
Sbjct: 1186 ASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIXQMEKAEFLFRNMKSRDL 1245
Query: 459 VLYNVMIACYAHHGHEEKAILLFEEMLE-KGIKPDAVTFVAILSAFRHCGSVEMGEKYFN 517
V +N +IA YA +G KA+ LF E + + IKPD+VT V++L A H ++++ +
Sbjct: 1246 VSWNAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHG 1305
Query: 518 SMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
+ + +T ++ Y + N + A++
Sbjct: 1306 YIIRHPGLREDTSVGNALLSFYAKCNYTQAALQ 1338
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 137/657 (20%), Positives = 253/657 (38%), Gaps = 139/657 (21%)
Query: 5 NLKEALICHVQAIK-AGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
NL+ A H I+ GL T N L+ Y+K N + + + F + +++ SWN I+
Sbjct: 1296 NLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQTFLMISRKDLISWNAIL 1355
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
A +S G E + L M E IR
Sbjct: 1356 DAFTES--------------------------------GCETHLVNLLHWM--LREGIRP 1381
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVK---TSNDASGFAVSSLIDMYSKCRCYEEAC 180
D T+ + + + V ++ H++ ++ DA + ++D Y+KC + A
Sbjct: 1382 DSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAXPTLGNGMLDAYAKCGNMKYAV 1441
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+F +E+ N+++ N+M++ + A F E D +WN ++ Y +N
Sbjct: 1442 NIFGSLSEKRNVVTCNSMISGYVTSSSHDDAYAIFNTMSE-TDLTTWNLMVRVYAENDFP 1500
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
++ L LF + G++ + T S L AC + +V ++ H +V++ ++ ++
Sbjct: 1501 DQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIR-ACFNDVRLNGAF 1559
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
+D+Y KC ++ A + L ++ ++M+ G+++ G EEA R F + E
Sbjct: 1560 IDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLEL------ 1613
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
GV D +I+ +L AC+ + G +I I +
Sbjct: 1614 --------------------------GVKPDHVIITAVLFACSHAGLVDEGWKIFNSIEK 1647
Query: 421 M-GVQMDKKLISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMI-ACYAHHGHEEKA 477
+ G Q + + +VD+ ++ G + A + + IE + ++ ++ AC HH
Sbjct: 1648 VHGFQPTMEQYACVVDLLARGGRIKDAYTFVTRMPIEANANIWGTLLGACRTHH------ 1701
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD---HYAC 534
VE+G + AD+ E+D +Y
Sbjct: 1702 ------------------------------EVELGR-----VVADHLFKIESDNIGNYVV 1726
Query: 535 MIDLYGRANQLEKAIEFMKSIPTEEDAVILG-SFLNVCRL---------NRNAELAG--- 581
M +LY + + +E + + T E G S++ V R N NA G
Sbjct: 1727 MSNLYAADARWDGVMEIRRLMRTRELKKPAGCSWIEVGRRKNMGSFQKGNANAPGLGLKD 1786
Query: 582 --EAEEKLLRLEGNNKARYV----QLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGC 632
K L+ G +K R V V + NW E+ + Q+ M + FA C
Sbjct: 1787 SVRGRSKWLKKLGTSKGRLVWGSCSKREVLESNANWMEVRMLMAQL-NMIQDTFAQC 1842
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 121/279 (43%), Gaps = 39/279 (13%)
Query: 241 EEGLKLFVRMGE--NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
+E L LF+ G + N A+ L +C ++ +H + LK G +S +
Sbjct: 951 DEALSLFLERVRCSVGYKPNGQILAALLKSCVAXSAIRFGSVLHGYALKLGHVSCQSLCK 1010
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
G++++Y K ++Y + F + +++ V+
Sbjct: 1011 GLLNLYAKSGALDYCNKL-------------------------------FGEMDQRDPVI 1039
Query: 359 WTALFSGYVKAQNCEA-LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
W + SG Q+ EA + L +++ + I+L CA + GK +H+Y
Sbjct: 1040 WNIVLSGLAGFQSHEAEVMRLFRAMHMVNEAKPNSVTIAIVLPVCA-RLREDAGKSVHSY 1098
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIE-RDLVLYNVMIACYAHHGHEEK 476
+++ G++ + L+ MY+KCG + N IE +D+V +N +IA ++ + E+
Sbjct: 1099 VIKSGLESHTLAGNALISMYAKCGLVCSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTEE 1158
Query: 477 AILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKY 515
A LF ML+ I+P+ T +IL C S+E Y
Sbjct: 1159 AFKLFHAMLKGPIQPNYATIASILPV---CASLEENAGY 1194
>gi|115445617|ref|NP_001046588.1| Os02g0290000 [Oryza sativa Japonica Group]
gi|47847947|dbj|BAD21737.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536119|dbj|BAF08502.1| Os02g0290000 [Oryza sativa Japonica Group]
Length = 930
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 182/623 (29%), Positives = 312/623 (50%), Gaps = 50/623 (8%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
E ++ N +++ K +++ S+F SS D+VT+N+++ GY+ Y + ALKLF
Sbjct: 335 EMDISVSNALMAHYSKVCEMRAVESIFRSSKMGDIVTWNTVIAGYV-MNRYPSRALKLFQ 393
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV-SSLIDMYS 171
+ A + D ++ S L C ++ N+ G ++H ++ + ++ ++L+ YS
Sbjct: 394 GLLFAG--MAPDSVSLISLLTACAQVGNLRVGIRVHGYIFRHPELLQETSLMNALVSFYS 451
Query: 172 KCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLI 231
+C ++ A R F + + +K D+VSWN ++
Sbjct: 452 QCDRFDAAFRSF------ITIQNK---------------------------DSVSWNAIL 478
Query: 232 SGYVQN-GDAEEGLKLFVRMGENGVRWNEHTFASA--LSACCGLRNVKCAKEIHSWVLKN 288
S + E+ +L M + +W+ T + +S CG++ V+ E H + L+
Sbjct: 479 SACANSEHHIEQFFRLLGEMWHDVTQWDSVTILNIIRMSTFCGIKMVQ---ESHGYSLRV 535
Query: 289 GLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHF 348
G + V++ I+D Y KC ++ AE++ RN + ++MI Y +E+A F
Sbjct: 536 GYTGDSSVANAILDAYAKCGYLHDAETLFRSLAGRNIVTGNTMISCYLKNNCVEDAEMTF 595
Query: 349 DSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAAL 408
+ + EK++ W + Y + C+ F L + + EG+ D + + +L AC +++
Sbjct: 596 NHMAEKDLTTWNLMSRLYAQNDLCDQAFCLFHQ-LQSEGLNPDTISITNILSACIHLSSV 654
Query: 409 HPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACY 468
K+ H Y+LR ++ D L L+D YSKCGN+ A +FQ + +DLV++ MI Y
Sbjct: 655 QLVKQCHGYMLRASLE-DIHLEGALLDAYSKCGNIANAYNLFQVSLHKDLVIFTAMIGAY 713
Query: 469 AHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE 528
A HG EKA+ LF +ML IKPD V A+LSA H G V+ G K F S+ Y + P
Sbjct: 714 AMHGMAEKAVELFSKMLTLDIKPDHVVLTALLSACSHAGLVDAGIKIFKSIREIYGVEPT 773
Query: 529 TDHYACMIDLYGRANQLEKAIEFMKSIPTE-EDAVILGSFLNVCRLNRNAELAGEAEEKL 587
+H ACM+DL R+ +L+ A F +P +A GS L C+++ ++ A ++L
Sbjct: 774 EEHCACMVDLLARSGRLQDAYSFALDMPPHVVNANAWGSLLGACKVHGEVKIGQLAADRL 833
Query: 588 LRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVG 647
+E + YV ++N++AA+ W + +RK M+ + AGCSW+ VE H+F
Sbjct: 834 FSMEAEDIGNYVIMSNIFAADDKWESVEHVRKLMKSKDMKKPAGCSWIEVEKTRHLFVAS 893
Query: 648 DVSHPKTNAIYSVLAIFTGELYE 670
DV H +IY VL G LY+
Sbjct: 894 DVQHQDRFSIYDVL----GSLYQ 912
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 145/618 (23%), Positives = 255/618 (41%), Gaps = 144/618 (23%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H IK GL T++ N L+ +Y+K C S +
Sbjct: 221 HGYVIKTGLEFDTLSGNALVSMYAK----------------------------CGGSIAM 252
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
A F + KD+V++NS++ GY + G +AL LF +M S E + T+ + L
Sbjct: 253 DDAHLAFSTICCKDVVSWNSIIAGY-SENGLFEEALALFGQMIS--EECLPNYSTLANVL 309
Query: 133 NLCVKLLNVG--FGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
C L+ G +G+++H F+V+ E+
Sbjct: 310 PFC-SLVEYGRHYGKEIHGFVVRHG--------------------------------LEM 336
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
++ NA++A + EM A+++ +R ++ D V+WNT+I+GYV N LKLF +
Sbjct: 337 DISVSNALMAHYSKVCEMR-AVESIFRSSKMGDIVTWNTVIAGYVMNRYPSRALKLFQGL 395
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG-LISNPFVSSGIVDVYCKCEN 309
G+ + + S L+AC + N++ +H ++ ++ L+ + + +V Y +C+
Sbjct: 396 LFAGMAPDSVSLISLLTACAQVGNLRVGIRVHGYIFRHPELLQETSLMNALVSFYSQCD- 454
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
+ A R F ++ K+ V W A+ S +
Sbjct: 455 ------------------------------RFDAAFRSFITIQNKDSVSWNAILSACANS 484
Query: 370 Q-NCEALFDLLSEF---VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
+ + E F LL E VT+ VT L ++ + C ++ +E H Y LR+G
Sbjct: 485 EHHIEQFFRLLGEMWHDVTQWDSVT-ILNIIRMSTFCGIKMV----QESHGYSLRVGYTG 539
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
D + + ++D Y+KCG + AE +F++ R++V N MI+CY + E A + F M
Sbjct: 540 DSSVANAILDAYAKCGYLHDAETLFRSLAGRNIVTGNTMISCYLKNNCVEDAEMTFNHMA 599
Query: 486 EK-------------------------------GIKPDAVTFVAILSAFRHCGSVEMGEK 514
EK G+ PD ++ ILSA H SV++ ++
Sbjct: 600 EKDLTTWNLMSRLYAQNDLCDQAFCLFHQLQSEGLNPDTISITNILSACIHLSSVQLVKQ 659
Query: 515 YFNSMTADYKISPETDHY-ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRL 573
M + S E H ++D Y + + A + + +D VI + + +
Sbjct: 660 CHGYM---LRASLEDIHLEGALLDAYSKCGNIANAYNLFQ-VSLHKDLVIFTAMIGAYAM 715
Query: 574 NRNAELAGEAEEKLLRLE 591
+ AE A E K+L L+
Sbjct: 716 HGMAEKAVELFSKMLTLD 733
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/433 (23%), Positives = 188/433 (43%), Gaps = 65/433 (15%)
Query: 142 GFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAA 201
GR LH VK +++DMY + +A VF+
Sbjct: 111 ALGRCLHGLAVKVGYADGAVVAKAVMDMYGRIGSLADAHTVFD----------------- 153
Query: 202 CCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHT 261
EM+ +DAV N LI+ + G + LF M +GV + T
Sbjct: 154 -------EMSC---------SDAVCRNILITASSRAGLYNDVFHLFRAMLASGVDESMPT 197
Query: 262 ---FASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLL 318
A L C LR ++ + IH +V+K GL + + +V +Y KC
Sbjct: 198 AVTVAVVLPVCAKLRVLRAGRSIHGYVIKTGLEFDTLSGNALVSMYAKC----------- 246
Query: 319 LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDL 378
G S+ M++A F ++ K+VV W ++ +GY + E L
Sbjct: 247 ---------------GGSIA--MDDAHLAFSTICCKDVVSWNSIIAGYSENGLFEEALAL 289
Query: 379 LSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYS 438
+ +++E + + + +L ++ H GKEIH +++R G++MD + + L+ YS
Sbjct: 290 FGQMISEECLPNYSTLANVLPFCSLVEYGRHYGKEIHGFVVRHGLEMDISVSNALMAHYS 349
Query: 439 KCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVA 498
K M E IF++ D+V +N +IA Y + + +A+ LF+ +L G+ PD+V+ ++
Sbjct: 350 KVCEMRAVESIFRSSKMGDIVTWNTVIAGYVMNRYPSRALKLFQGLLFAGMAPDSVSLIS 409
Query: 499 ILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE 558
+L+A G++ +G + + ++ ET ++ Y + ++ + A +I
Sbjct: 410 LLTACAQVGNLRVGIRVHGYIFRHPELLQETSLMNALVSFYSQCDRFDAAFRSFITI-QN 468
Query: 559 EDAVILGSFLNVC 571
+D+V + L+ C
Sbjct: 469 KDSVSWNAILSAC 481
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 133/569 (23%), Positives = 223/569 (39%), Gaps = 104/569 (18%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A+K G + ++ +Y + L ++ +FDEM + N +I+A ++
Sbjct: 117 HGLAVKVGYADGAVVAKAVMDMYGRIGSLADAHTVFDEMSCSDAVCRNILITASSRA--- 173
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSA--DEHIRMDEFTVTS 130
G D LF M ++ DE + TV
Sbjct: 174 -----------------------------GLYNDVFHLFRAMLASGVDESMPT-AVTVAV 203
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L +C KL + GR +H +++KT + + ++L+ MY+KC ++
Sbjct: 204 VLPVCAKLRVLRAGRSIHGYVIKTGLEFDTLSGNALVSMYAKCGG--------SIAMDDA 255
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
+L A CC+ D VSWN++I+GY +NG EE L LF +M
Sbjct: 256 HL----AFSTICCK------------------DVVSWNSIIAGYSENGLFEEALALFGQM 293
Query: 251 GENGVRWNEHTFASALSACCGLRNVK-CAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
N T A+ L C + + KEIH +V+++GL + VS+ ++ Y K
Sbjct: 294 ISEECLPNYSTLANVLPFCSLVEYGRHYGKEIHGFVVRHGLEMDISVSNALMAHYSKVCE 353
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
M ES+ F S ++V W + +GYV
Sbjct: 354 MRAVESI-------------------------------FRSSKMGDIVTWNTVIAGYVMN 382
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG-VQMDKK 428
+ L + G+ D++ L+ LL ACA L G +H YI R + +
Sbjct: 383 RYPSRALKLFQGLLFA-GMAPDSVSLISLLTACAQVGNLRVGIRVHGYIFRHPELLQETS 441
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMI-ACYAHHGHEEKAILLFEEMLEK 487
L++ LV YS+C A F +D V +N ++ AC H E+ L EM
Sbjct: 442 LMNALVSFYSQCDRFDAAFRSFITIQNKDSVSWNAILSACANSEHHIEQFFRLLGEMWHD 501
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEK 547
+ D+VT + I+ CG + E + S+ Y + ++ ++D Y + L
Sbjct: 502 VTQWDSVTILNIIRMSTFCGIKMVQESHGYSLRVGY--TGDSSVANAILDAYAKCGYLHD 559
Query: 548 AIEFMKSIPTEEDAVILGSFLNVCRLNRN 576
A +S+ ++ G+ + C L N
Sbjct: 560 AETLFRSLAGRN--IVTGNTMISCYLKNN 586
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 120/243 (49%), Gaps = 8/243 (3%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +++ G T + N ++ Y+K L ++ LF + RN+ + NT+IS +K++ +
Sbjct: 529 HGYSLRVGYTGDSSVANAILDAYAKCGYLHDAETLFRSLAGRNIVTGNTMISCYLKNNCV 588
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+ A F+ KDL T+N M Y + + A LF ++QS E + D ++T+ L
Sbjct: 589 EDAEMTFNHMAEKDLTTWNLMSRLYAQNDLCD-QAFCLFHQLQS--EGLNPDTISITNIL 645
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C+ L +V +Q H +M++ S + +L+D YSKC A +F+ + +L
Sbjct: 646 SACIHLSSVQLVKQCHGYMLRASLEDIHLE-GALLDAYSKCGNIANAYNLFQVSLHK-DL 703
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELN---DAVSWNTLISGYVQNGDAEEGLKLFVR 249
+ AM+ A G E A++ F + L+ D V L+S G + G+K+F
Sbjct: 704 VIFTAMIGAYAMHGMAEKAVELFSKMLTLDIKPDHVVLTALLSACSHAGLVDAGIKIFKS 763
Query: 250 MGE 252
+ E
Sbjct: 764 IRE 766
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 126/306 (41%), Gaps = 43/306 (14%)
Query: 219 PELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVK-- 276
P L+D + + L+ GD L M G+R N A+A+ + L + +
Sbjct: 50 PALDDRMRCSALLRERAVGGDHYGCTSLLRWMLARGLRPNRLALAAAVKSSSALPDCRGG 109
Query: 277 --CAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVG 334
+ +H +K G V+ ++D+Y +
Sbjct: 110 AALGRCLHGLAVKVGYADGAVVAKAVMDMYGRI--------------------------- 142
Query: 335 YSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTK--EGVVTDA 392
G++ +A FD ++ + V L + +A +F L + + + A
Sbjct: 143 ----GSLADAHTVFDEMSCSDAVCRNILITASSRAGLYNDVFHLFRAMLASGVDESMPTA 198
Query: 393 LILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGN---MTYAEII 449
+ + ++L CA L G+ IH Y+++ G++ D + LV MY+KCG M A +
Sbjct: 199 VTVAVVLPVCAKLRVLRAGRSIHGYVIKTGLEFDTLSGNALVSMYAKCGGSIAMDDAHLA 258
Query: 450 FQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSV 509
F +D+V +N +IA Y+ +G E+A+ LF +M+ + P+ T +L C V
Sbjct: 259 FSTICCKDVVSWNSIIAGYSENGLFEEALALFGQMISEECLPNYSTLANVLP---FCSLV 315
Query: 510 EMGEKY 515
E G Y
Sbjct: 316 EYGRHY 321
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 181/562 (32%), Positives = 282/562 (50%), Gaps = 20/562 (3%)
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
D + S L C R LHA V + F SSL+ Y + A VF
Sbjct: 19 DPHLLPSALKSCPAQ---PLARALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAARSVF 75
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMA------LKTFWRQPELNDAVSWNTLISGYVQN 237
+ E+ N++ +A++A G+ E A +++ +P + ++WN L+SG ++
Sbjct: 76 DRMPEK-NVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEP---NVITWNGLVSGLNRS 131
Query: 238 GDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVS 297
G A + + VRM G + + ALSA ++ V K++H +V+K G + V
Sbjct: 132 GRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVV 191
Query: 298 SGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL----TE 353
+ ++D+Y KC + + + S ++++ G S + EA F E
Sbjct: 192 TALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVE 251
Query: 354 KNVVVWTALFSGYVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
NVV WT++ + V+ ++ EA+ DL + GV +++ + +L A A AAL G+
Sbjct: 252 LNVVSWTSIVACCVQNGRDLEAV-DLFRTMQSI-GVEPNSVTIPCVLPAFANVAALMHGR 309
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
H + LR G D + S LVDMY+KCG +A IF R++V +N MI YA HG
Sbjct: 310 SAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHG 369
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
A+ LF M + KPD VTF +L A G E G +YFN M + ISP +HY
Sbjct: 370 DAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHY 429
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
ACM+ L GR+ +L++A + + +P E D+ I GS L CR+ N LA A EKL +LE
Sbjct: 430 ACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYGNVLLAEVAAEKLFQLEP 489
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
N YV L+N+YA++ W + R+R +M+ M + GCSW+ +++++H+ GD SHP
Sbjct: 490 GNAGNYVLLSNIYASKKMWDGVNRVRDEMKNMGLKKEKGCSWIEIKNKVHMLLAGDNSHP 549
Query: 653 KTNAIYSVLAIFTGELYEIAGA 674
AI L T E+ + A
Sbjct: 550 MMTAITEKLNQLTIEMNRLGFA 571
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 125/460 (27%), Positives = 208/460 (45%), Gaps = 30/460 (6%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A+ +GL + L+H Y + +R +FD MPE+NV W+ +I+ D
Sbjct: 40 HAAAVVSGLAEDPFVASSLLHSYIRLGATGAARSVFDRMPEKNVVGWSALIAGYSARGDA 99
Query: 73 KQARSLFD----SSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
+ A L + + +++T+N ++ G +N G DA+ + M S E D V
Sbjct: 100 EAAWGLLEQMRSAGVEPNVITWNGLVSG-LNRSGRALDAVTALVRMHS--EGFFPDATGV 156
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE 188
+ L+ + V G+Q+H ++VK V++LIDMY KC +E RVF +
Sbjct: 157 SCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHE-SS 215
Query: 189 EVNLISKNAMVAACCREGEMEMALKTF----WRQPELNDAVSWNTLISGYVQNGDAEEGL 244
+++ S NA+VA R ++ AL F R ELN VSW ++++ VQNG E +
Sbjct: 216 HMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELN-VVSWTSIVACCVQNGRDLEAV 274
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
LF M GV N T L A + + + H + L+ G + + +V S +VD+Y
Sbjct: 275 DLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMY 334
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL----TEKNVVVWT 360
KC +A ++ RN S ++MI GY++ G+ A + F S+ + ++V +T
Sbjct: 335 AKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFT 394
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGV---VTDALILVILLGACALQAALHPGKEIHAY 417
+ +A E +E G+ + +V LLG GK AY
Sbjct: 395 CVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACMVTLLG--------RSGKLDEAY 446
Query: 418 IL--RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIE 455
L M + D + +L+ GN+ AE+ + +
Sbjct: 447 DLINEMPFEPDSCIWGSLLGSCRVYGNVLLAEVAAEKLFQ 486
>gi|357127483|ref|XP_003565409.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Brachypodium distachyon]
Length = 552
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 172/555 (30%), Positives = 275/555 (49%), Gaps = 34/555 (6%)
Query: 108 LKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVG-FGRQLHAFMVKTSNDASGFAVSSL 166
L++++ M + R D +T L G G +HA +VK + + SSL
Sbjct: 3 LRVYVGMLA--RGARPDAYTFPPLLKAVTAAAERGAVGDAVHAHVVKFGMELNAHVASSL 60
Query: 167 IDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVS 226
+ MY A +G + L W + V
Sbjct: 61 VLMY------------------------------AARGDGAVARTLLDAWPARGGDTPVV 90
Query: 227 WNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVL 286
WN LISG+ ++ FV M GV T+ + LSAC + + ++H V+
Sbjct: 91 WNALISGHRRSRQFRLSCCSFVDMVRTGVVPTPVTYITVLSACGKDKYIWLGMQVHKCVV 150
Query: 287 KNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARR 346
+G++ + V + ++D+Y +C M+ A + VRN+ S +S+I G+ G +++AR
Sbjct: 151 ASGVLPDLKVGNALIDMYAECSEMDAAWELFEGMEVRNTVSWTSVISGFLRLGQVDQART 210
Query: 347 HFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQA 406
FD + E++ V WTA+ GYV+A ++ E + V D +V ++ ACA
Sbjct: 211 LFDCMPERDTVSWTAMIDGYVQAGQFREALEMFREMQFSK-VRADEFTMVSVVTACAQLG 269
Query: 407 ALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIA 466
AL G+ Y+ R G++MD + + LVDMYSKCG++ A +F+ RD + +I
Sbjct: 270 ALETGEWARIYMSRHGIKMDTFVGNALVDMYSKCGSIQQALGVFKEMYIRDKFTWTAVIL 329
Query: 467 CYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKIS 526
A +GH E+AI +F ML PD VTF+ +L+A H G V+ G +F SMT Y I+
Sbjct: 330 GLAVNGHGEEAINMFYRMLRVFEAPDEVTFIGVLTACTHAGLVDKGRDFFLSMTGSYGIA 389
Query: 527 PETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEK 586
P H+ C+IDL GRA +L++A+E + ++P ++ I G+ L CR++ N+E+ A E
Sbjct: 390 PNVMHFGCLIDLLGRAGKLKEALETIGNMPMRPNSAIWGTLLAACRVHGNSEIGQLAAEH 449
Query: 587 LLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTV 646
LL L+ N Y+ L+N+YA W ++ R+R+ + + GCS + + IH F
Sbjct: 450 LLELDTENGMVYILLSNLYAKSNRWEDVRRLRQVIMEKGIKKEPGCSLIEMNGTIHEFIA 509
Query: 647 GDVSHPKTNAIYSVL 661
GD SHP + IYS L
Sbjct: 510 GDRSHPMSKEIYSKL 524
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 164/366 (44%), Gaps = 41/366 (11%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + +G+ N LI +Y++ + + + +LF+ M RN SW ++IS ++ +
Sbjct: 146 HKCVVASGVLPDLKVGNALIDMYAECSEMDAAWELFEGMEVRNTVSWTSVISGFLRLGQV 205
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
QAR+LFD P +D V++ +M+ GY+ A G +AL++F EMQ + +R DEFT+ S +
Sbjct: 206 DQARTLFDCMPERDTVSWTAMIDGYVQA-GQFREALEMFREMQFS--KVRADEFTMVSVV 262
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C +L + G +M + F ++L+DMYSKC ++A VF+
Sbjct: 263 TACAQLGALETGEWARIYMSRHGIKMDTFVGNALVDMYSKCGSIQQALGVFK-------- 314
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
EM ++ D +W +I G NG EE + +F RM
Sbjct: 315 ----------------EMYIR---------DKFTWTAVILGLAVNGHGEEAINMFYRMLR 349
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIH-SWVLKNGLISNPFVSSGIVDVYCKCENMN 311
+E TF L+AC V ++ S G+ N ++D+ + +
Sbjct: 350 VFEAPDEVTFIGVLTACTHAGLVDKGRDFFLSMTGSYGIAPNVMHFGCLIDLLGRAGKLK 409
Query: 312 YA-ESMLLLKGVRNSFSISSMIVGYSLQGNME---EARRHFDSLTEKNVVVWTALFSGYV 367
A E++ + NS +++ + GN E A H L +N +V+ L + Y
Sbjct: 410 EALETIGNMPMRPNSAIWGTLLAACRVHGNSEIGQLAAEHLLELDTENGMVYILLSNLYA 469
Query: 368 KAQNCE 373
K+ E
Sbjct: 470 KSNRWE 475
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 185/636 (29%), Positives = 315/636 (49%), Gaps = 90/636 (14%)
Query: 56 VFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQ 115
FS N +++ K L A+SL +DLVT+NSM+ + E + +AL +F+ +
Sbjct: 150 TFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERF-MEAL-MFLRLM 207
Query: 116 SADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSN-DASGFAVSSLIDMYSKCR 174
E ++ D T S L C L + G+++HA+ ++T + + F S+L+DMY C
Sbjct: 208 VL-EGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCG 266
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
E VF+ + R+ L WN +I+GY
Sbjct: 267 QVESGRLVFDSVLD----------------------------RKIGL-----WNAMIAGY 293
Query: 235 VQNGDAEEGLKLFVRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISN 293
Q+ E+ L LF+ M G+ N T +S + A + + IH +V+K GL +N
Sbjct: 294 AQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETN 353
Query: 294 PFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
++ + ++D+Y S G+++ ++R FDS+ +
Sbjct: 354 RYLQNALIDMY-------------------------------SRMGDIKTSKRIFDSMED 382
Query: 354 KNVVVWTALFSGYVK-AQNCEALFDL-----LSEFVTKEGVVTD---------ALILVIL 398
+++V W + + YV ++ +AL L + E T +G D ++ L+ +
Sbjct: 383 RDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTV 442
Query: 399 LGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDL 458
L CA +AL GKEIHAY +R + + S LVDMY+KCG + A +F R++
Sbjct: 443 LPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNV 502
Query: 459 VLYNVMIACYAHHGHEEKAILLFEEMLEKG-----IKPDAVTFVAILSAFRHCGSVEMGE 513
+ +NV+I Y HG ++++ LFE+M+ +G +KP VTF+A+ ++ H G V+ G
Sbjct: 503 ITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGL 562
Query: 514 KYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAV-ILGSFLNVCR 572
F+ M ++ I P DHYAC++DL GRA ++E+A + ++P+ D V S L CR
Sbjct: 563 SLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACR 622
Query: 573 LNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGC 632
+ N E+ A E LL+L+ + + YV L+N+Y++ G W + +R++M+ M + GC
Sbjct: 623 IYHNIEIGEIAAENLLQLQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEPGC 682
Query: 633 SWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
SW+ E+H F GD+SHP++ ++ L + L
Sbjct: 683 SWIEYGDEVHKFLAGDLSHPQSEKLHDFLETLSERL 718
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 138/574 (24%), Positives = 247/574 (43%), Gaps = 116/574 (20%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
++ L L + + HV G + N L+++Y K L ++ K+FD + ER+ SWN
Sbjct: 23 IQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAYKVFDRITERDQVSWN 82
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
+IISA + + + A + + ML EG+E + L + M A +
Sbjct: 83 SIISALCRFEEWEVA-----------IKAFRLML-----MEGFEPSSFTL-VSMALACSN 125
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA- 179
+R K + G+Q+H C C+ +
Sbjct: 126 LR--------------KRDGLWLGKQIHG-----------------------C-CFRKGH 147
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
R F S NA++A + G ++ A K+ E D V+WN++IS + QN
Sbjct: 148 WRTF----------SNNALMAMYAKLGRLDDA-KSLLVLFEDRDLVTWNSMISSFSQNER 196
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLK-NGLISNPFVSS 298
E L M GV+ + TFAS L AC L ++ KEIH++ L+ + +I N FV S
Sbjct: 197 FMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGS 256
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
+VD+YC C G +E R FDS+ ++ + +
Sbjct: 257 ALVDMYCNC-------------------------------GQVESGRLVFDSVLDRKIGL 285
Query: 359 WTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
W A+ +GY ++++ E L E G+ ++A + ++ A + + IH Y+
Sbjct: 286 WNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYV 345
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
++ G++ ++ L + L+DMYS+ G++ ++ IF + +RD+V +N +I Y G A+
Sbjct: 346 IKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDAL 405
Query: 479 LLFEEML--------------EKGI--KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTAD 522
LL EM EK + KP+++T + +L ++ G K ++
Sbjct: 406 LLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKG-KEIHAYAIR 464
Query: 523 YKISPETDHYACMIDLYGRANQLEKAIEFMKSIP 556
++ + + ++D+Y + L A +P
Sbjct: 465 NLLASQVTVGSALVDMYAKCGCLNLARRVFDQMP 498
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 112/442 (25%), Positives = 187/442 (42%), Gaps = 80/442 (18%)
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVK--TSNDASGFAVSSLIDMYSKCRCYEEACR 181
D F + L + + G+Q+HA + K + +S ++L++MY KC +A +
Sbjct: 9 DNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAYK 68
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
VF+ TE D VSWN++IS + + E
Sbjct: 69 VFDRITER---------------------------------DQVSWNSIISALCRFEEWE 95
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLR---NVKCAKEIHSWVLKNGLISNPFVSS 298
+K F M G + T S AC LR + K+IH +
Sbjct: 96 VAIKAFRLMLMEGFEPSSFTLVSMALACSNLRKRDGLWLGKQIHGCCFR----------- 144
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
KG +FS ++++ Y+ G +++A+ ++++V
Sbjct: 145 ---------------------KGHWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVT 183
Query: 359 WTALFSGYVKAQN-CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
W ++ S + + + EAL L + EGV D + +L AC+ L GKEIHAY
Sbjct: 184 WNSMISSFSQNERFMEALMFL--RLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAY 241
Query: 418 ILRMGVQMDKKLI-STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
LR ++ + S LVDMY CG + ++F + ++R + L+N MIA YA H+EK
Sbjct: 242 ALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEK 301
Query: 477 AILLFEEM-LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA-- 533
A++LF EM G+ +A T +I+ A+ C + E + K ET+ Y
Sbjct: 302 ALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVI---KRGLETNRYLQN 358
Query: 534 CMIDLYGRANQLEKAIEFMKSI 555
+ID+Y R ++ + S+
Sbjct: 359 ALIDMYSRMGDIKTSKRIFDSM 380
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 119/529 (22%), Positives = 223/529 (42%), Gaps = 90/529 (17%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLF------DEMPERNVFSWNT 61
EAL+ + G+ +T ++ S +LLR +++ D++ E N F +
Sbjct: 199 EALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIE-NSFVGSA 257
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
++ ++ R +FDS + + +N+M+ GY +E ++ AL LFIEM++A +
Sbjct: 258 LVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSE-HDEKALMLFIEMEAA-AGL 315
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+ T++S + V+ + +H +++K + + + ++LIDMYS+ + + R
Sbjct: 316 YSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKR 375
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F+ E D VSWNT+I+ YV G +
Sbjct: 376 IFDSM---------------------------------EDRDIVSWNTIITSYVICGRSS 402
Query: 242 EGLKLFVRM----------------GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWV 285
+ L L M + + N T + L C L + KEIH++
Sbjct: 403 DALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYA 462
Query: 286 LKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEAR 345
++N L S V S +VD+Y KC +N A + +RN + + +I+ Y + G +E+
Sbjct: 463 IRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESL 522
Query: 346 RHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQ 405
F+ + + G VK E F L + G+V + L L + +
Sbjct: 523 ELFEDMVAEGAK------GGEVKPT--EVTFIALFASCSHSGMVDEGLSLFHKMKN---E 571
Query: 406 AALHPGKEIHAYIL----RMG-VQMDKKLISTLVDMYSKCG-------------NMTYAE 447
+ P + +A I+ R G V+ L++T+ + K G N+ E
Sbjct: 572 HGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRIYHNIEIGE 631
Query: 448 IIFQNF--IERDLVLYNVMIA-CYAHHGHEEKAILLFEEMLEKGIKPDA 493
I +N ++ D+ + V+++ Y+ G +KA+ L M G+K +
Sbjct: 632 IAAENLLQLQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEP 680
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 387 GVVTDALILVILLGACALQAALHPGKEIHAYILRMG------VQMDKKLISTLVDMYSKC 440
G D +L A A L+ GK+IHA++ + G V +D +TLV+MY KC
Sbjct: 5 GFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTID----NTLVNMYGKC 60
Query: 441 GNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
G + A +F ERD V +N +I+ E AI F ML +G +P + T V++
Sbjct: 61 GGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSM 119
>gi|147853412|emb|CAN82303.1| hypothetical protein VITISV_013933 [Vitis vinifera]
Length = 549
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 171/610 (28%), Positives = 298/610 (48%), Gaps = 78/610 (12%)
Query: 68 KSHDLKQARSLFDSSPHK-DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEF 126
K + + A S+F H+ ++ +N+++ G+I G+ + + + +M+ +E + D+F
Sbjct: 4 KCNQMNFALSIFSDPTHEINVFAFNAIISGFIT-NGFPEEGFEFYQKMR--NEGVMPDKF 60
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
T + C+ +L + +++H + K + F S+L++ Y K
Sbjct: 61 TFPCAIKACLDVLEI---KKIHGLLFKFGLELDVFIGSALVNCYLKF------------- 104
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
G ME A F P + D V WN +++GY Q G E L+
Sbjct: 105 -------------------GLMEHAQVAFEELP-IRDVVLWNAMVNGYAQIGQFEMVLET 144
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
F RM + V + T LS + ++ + IH + +K G S VS+ ++D+Y K
Sbjct: 145 FRRMNDESVVPSRFTVTGILSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGK 204
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
C+ + E+A F+ + EK++ W ++ S +
Sbjct: 205 CKCI-------------------------------EDALEIFEMMREKDIFSWNSIXSVH 233
Query: 367 VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMD 426
+ + + LL + G+ D + + +L AC+ AAL G+EIH Y++ G+ D
Sbjct: 234 EQCGDHDGTLRLLDRMLGA-GIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKD 292
Query: 427 KK------LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
K L + ++DMY+KCG+M A ++F+ +D+ +N+MI Y HG+ +A+ +
Sbjct: 293 GKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEM 352
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
F M E +KPD VTFV +LSA H G V G + M + Y ++P +HY C+ID+ G
Sbjct: 353 FSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLAQMKSKYDVAPTIEHYTCVIDMLG 412
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQ 600
RA QL++A E ++P E + V+ + L CRL+++A LA A +++ LE + YV
Sbjct: 413 RAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVL 472
Query: 601 LANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSV 660
++NVY A G + E+ +R MR + GCSW+ +++ +H+F D +HP+ +IY+
Sbjct: 473 MSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAYSIYAG 532
Query: 661 LAIFTGELYE 670
L T L E
Sbjct: 533 LNSLTARLCE 542
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 154/330 (46%), Gaps = 44/330 (13%)
Query: 47 LFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEAD 106
LF E +VF + +++ +K ++ A+ F+ P +D+V +N+M+ GY +E
Sbjct: 82 LFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEM- 140
Query: 107 ALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVS-S 165
L+ F M DE + FTVT L++ + ++ GR +H F +K D SG AVS S
Sbjct: 141 VLETFRRMN--DESVVPSRFTVTGILSVFAVMGDLNNGRIIHGFAMKMGYD-SGVAVSNS 197
Query: 166 LIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAV 225
LIDMY KC+C E+A +FE E+ D
Sbjct: 198 LIDMYGKCKCIEDALEIFEMMREK---------------------------------DIF 224
Query: 226 SWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWV 285
SWN++ S + Q GD + L+L RM G++ + T + L AC L + +EIH ++
Sbjct: 225 SWNSIXSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYM 284
Query: 286 LKNGL------ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQG 339
+ +GL I + + + ++D+Y KC +M A + ++ S + MI+GY + G
Sbjct: 285 IVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGYGMHG 344
Query: 340 NMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
EA F + E + F G + A
Sbjct: 345 YGNEALEMFSRMCEVQLKPDEVTFVGVLSA 374
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 112/271 (41%), Gaps = 73/271 (26%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L I H A+K G +N LI +Y K + ++ ++F+ M E+++FSWN+I S
Sbjct: 172 DLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXS 231
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
H+ CG + +G L+L M A I+ D
Sbjct: 232 V------------------HEQ--------CG--DHDG----TLRLLDRMLGAG--IQPD 257
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV------SSLIDMYSKCRCYEE 178
TVT+ L C L + GR++H +M+ + G + +++IDMY+KC +
Sbjct: 258 LVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRD 317
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
A VFE + D SWN +I GY +G
Sbjct: 318 AHLVFERMXNK---------------------------------DVASWNIMIMGYGMHG 344
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
E L++F RM E ++ +E TF LSAC
Sbjct: 345 YGNEALEMFSRMCEVQLKPDEVTFVGVLSAC 375
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 113/281 (40%), Gaps = 26/281 (9%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
M ++ L+ + A L + + IH Y + L + K D+ V N
Sbjct: 249 MLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDD-----VLLKN 303
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
+I K ++ A +F+ +KD+ ++N M+ GY GY +AL++F M +
Sbjct: 304 AVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGY-GMHGYGNEALEMFSRM--CEVQ 360
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFA-VSSLIDMYSKCRCYEEA 179
++ DE T L+ C V GR A M + A + +IDM + +EA
Sbjct: 361 LKPDEVTFVGVLSACSHAGFVSQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEA 420
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEM----ALKTFWRQPELNDAVSWNTLISGYV 235
+ E N + A++AAC + A + F +PE S+ + + Y
Sbjct: 421 YELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPE--HCGSYVLMSNVYG 478
Query: 236 QNGDAEEGLKLFVRMGENGVR------WNE-----HTFASA 265
G EE L++ M + VR W E H F SA
Sbjct: 479 AVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSA 519
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 436 MYSKCGNMTYAEIIFQNFI-ERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAV 494
MYSKC M +A IF + E ++ +N +I+ + +G E+ +++M +G+ PD
Sbjct: 1 MYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKF 60
Query: 495 TFVAILSA 502
TF + A
Sbjct: 61 TFPCAIKA 68
>gi|15226879|ref|NP_181048.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099187|sp|O64766.1|PP185_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g35030, mitochondrial; Flags: Precursor
gi|3033399|gb|AAC12843.1| hypothetical protein [Arabidopsis thaliana]
gi|209414526|gb|ACI46503.1| At2g35030 [Arabidopsis thaliana]
gi|330253957|gb|AEC09051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 178/603 (29%), Positives = 301/603 (49%), Gaps = 53/603 (8%)
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I K + +AR LFD P +D+VT+ ++ GYI G +A +LF + S
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKL-GDMREARELFDRVDS----- 105
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
R + T T+ ++ ++ + L M + + + +++ID Y++ ++A
Sbjct: 106 RKNVVTWTAMVSGYLRSKQLSIAEMLFQEMP----ERNVVSWNTMIDGYAQSGRIDKALE 161
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F+ E N++S N+MV A + G ++ A+ F R P D VSW ++ G +NG +
Sbjct: 162 LFDEMPER-NIVSWNSMVKALVQRGRIDEAMNLFERMPR-RDVVSWTAMVDGLAKNGKVD 219
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E +LF C RN I SW N +I+
Sbjct: 220 EARRLF--------------------DCMPERN------IISW---NAMITG-------- 242
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
Y + ++ A+ + + R+ S ++MI G+ M +A FD + EKNV+ WT
Sbjct: 243 --YAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTT 300
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+ +GYV+ + E ++ S+ + V + V +L AC+ A L G++IH I +
Sbjct: 301 MITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKS 360
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFI--ERDLVLYNVMIACYAHHGHEEKAIL 479
Q ++ + S L++MYSK G + A +F N + +RDL+ +N MIA YAHHGH ++AI
Sbjct: 361 VHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIE 420
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
++ +M + G KP AVT++ +L A H G VE G ++F + D + +HY C++DL
Sbjct: 421 MYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLC 480
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYV 599
GRA +L+ F+ G+ L+ C ++ +A E +K+L ++ YV
Sbjct: 481 GRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYV 540
Query: 600 QLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYS 659
++N+YAA G E +R +M+ + GCSWV V + H+F VGD SHP+ A+ S
Sbjct: 541 LMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDS 600
Query: 660 VLA 662
+L+
Sbjct: 601 ILS 603
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 127/475 (26%), Positives = 221/475 (46%), Gaps = 26/475 (5%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
+T ++ Y + L + LF EMPERNV SWNT+I +S + +A LFD P +
Sbjct: 110 VTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPER 169
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR 145
++V++NSM+ + G +A+ LF M R D + T+ ++ K V R
Sbjct: 170 NIVSWNSMVKALVQ-RGRIDEAMNLFERMP------RRDVVSWTAMVDGLAKNGKVDEAR 222
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
+L M + + + +++I Y++ +EA ++F+ E + S N M+ R
Sbjct: 223 RLFDCMP----ERNIISWNAMITGYAQNNRIDEADQLFQ-VMPERDFASWNTMITGFIRN 277
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG-VRWNEHTFAS 264
EM A F R PE N +SW T+I+GYV+N + EE L +F +M +G V+ N T+ S
Sbjct: 278 REMNKACGLFDRMPEKN-VISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVS 336
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLL--LKGV 322
LSAC L + ++IH + K+ N V+S ++++Y K + A M L
Sbjct: 337 ILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQ 396
Query: 323 RNSFSISSMIVGYSLQGNMEEARRHFDSLT----EKNVVVWTALFSGYVKAQNCEALFDL 378
R+ S +SMI Y+ G+ +EA ++ + + + V + L A E +
Sbjct: 397 RDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEF 456
Query: 379 LSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYS 438
+ V E + L+ C L K++ +I ++ + ++ +
Sbjct: 457 FKDLVRDESLPLREEHYTCLVDLCGRAGRL---KDVTNFINCDDARLSRSFYGAILSACN 513
Query: 439 KCGNMTYAEIIFQNFIER---DLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
++ A+ + + +E D Y +M YA +G E+A + +M EKG+K
Sbjct: 514 VHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLK 568
>gi|212275047|ref|NP_001130303.1| uncharacterized protein LOC100191397 [Zea mays]
gi|194688792|gb|ACF78480.1| unknown [Zea mays]
Length = 706
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 199/687 (28%), Positives = 320/687 (46%), Gaps = 113/687 (16%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L + CH A+K GL N L+ +Y+K + ++ +LFD M
Sbjct: 57 LDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGM-------------- 102
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
P + V++ +M+ G G DAL+LF M IR+D
Sbjct: 103 -----------------PSPNEVSFTAMMGGLAQG-GAVDDALRLFARMSRTG--IRVDP 142
Query: 126 FTVTSTLNLCVKL----LNVGFGRQL----HAFMVKTSNDASGFAVSSLIDMYSKCRCYE 177
V+S L C + NV QL HA +V+ + +SL+D+Y+K +
Sbjct: 143 VAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMD 202
Query: 178 EACRVFE--------------------GCTE--------------EVNLISKNAMVAACC 203
EA +VFE GC E E N ++ + M+A+C
Sbjct: 203 EAIKVFESLSSVSIVSWNILITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLASCI 262
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
+ ++ A F + P+ + +WNTL+SGY Q +E + LF RM V+ + T A
Sbjct: 263 KARDVPSARAMFDKIPKPS-VTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLA 321
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
LS+C L N + K++HS ++ L ++ FV+SG++D+Y KC + A
Sbjct: 322 VILSSCSRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIA---------- 371
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV 383
+I+ F+ +TE++VV W ++ SG E FD L + +
Sbjct: 372 -------LII--------------FNMMTERDVVCWNSMISGLAIHSLSEEAFDFLKQ-M 409
Query: 384 TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNM 443
+ G+ ++ CA +++ G+++HA +L+ G + + +L+DMY+K GNM
Sbjct: 410 RENGMFPTESSYASMINLCARLSSIPQGRQMHAQVLKDGYDQNVYVGCSLIDMYAKSGNM 469
Query: 444 TYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAF 503
A + F I ++LV +N MI YA +G EKA+ LFE ML KPD+VTF+A+L+
Sbjct: 470 DDARLFFNCMIVKNLVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGC 529
Query: 504 RHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVI 563
H G V+ +FNSM ++Y I+P +HY C+ID RA + + + +P ++D ++
Sbjct: 530 SHSGLVDEAVTFFNSMESNYGITPLVEHYTCLIDALARAARFAEVEAVIGKMPYKDDPIL 589
Query: 564 LGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQM-- 621
L C ++ NAEL + + L RL+ N + YV L+N+YA G + +R M
Sbjct: 590 WEVLLAACVVHHNAELGEFSAKHLFRLDPKNPSPYVLLSNIYATLGRHGDASAVRALMSS 649
Query: 622 RGMKGNRFAGCSWVYVEHEIHIFTVGD 648
RG+ R G SWV + F V D
Sbjct: 650 RGVVKGR--GYSWVNHKDGSRAFMVAD 674
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 133/545 (24%), Positives = 227/545 (41%), Gaps = 114/545 (20%)
Query: 51 MPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKL 110
MP+RN SWNT+I+A +S SP + L Y ML
Sbjct: 1 MPDRNAVSWNTVIAAVARS-----------GSPGEALEMYQGML---------------- 33
Query: 111 FIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMY 170
E + FT+ S L+ C + + GR+ H VK D F + L+ MY
Sbjct: 34 -------QEGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMY 86
Query: 171 SKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTL 230
+KC +A R+F+G N +S AM+ + G +
Sbjct: 87 TKCGSVADAVRLFDGMPSP-NEVSFTAMMGGLAQGGAV---------------------- 123
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC---CG-----LRNVKCAKEIH 282
++ L+LF RM G+R + +S L AC C R ++ A+ IH
Sbjct: 124 ----------DDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIH 173
Query: 283 SWVLKNGLISNPFVSSGIVDVYCKCENMN-----------------------------YA 313
+ V++ G S+ V + +VD+Y K M+ Y
Sbjct: 174 ALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYE 233
Query: 314 ESMLLLKGVR------NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
+M +L+ ++ N + S+M+ ++ AR FD + + +V W L SGY
Sbjct: 234 RAMEVLEFMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKIPKPSVTTWNTLLSGYG 293
Query: 368 KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDK 427
+ + + DL + + V D L ++L +C+ GK++H+ +R+ + D
Sbjct: 294 QEELHQETIDLFRR-MQHQNVQPDRTTLAVILSSCSRLGNFELGKQVHSASVRLLLHNDM 352
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
+ S L+D+YSKCG + A IIF ERD+V +N MI+ A H E+A ++M E
Sbjct: 353 FVASGLIDIYSKCGQVGIALIIFNMMTERDVVCWNSMISGLAIHSLSEEAFDFLKQMREN 412
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC-MIDLYGRANQLE 546
G+ P ++ ++++ S+ G + + D + + C +ID+Y ++ ++
Sbjct: 413 GMFPTESSYASMINLCARLSSIPQGRQMHAQVLKDGY--DQNVYVGCSLIDMYAKSGNMD 470
Query: 547 KAIEF 551
A F
Sbjct: 471 DARLF 475
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 171/383 (44%), Gaps = 49/383 (12%)
Query: 219 PELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCA 278
P+ N AVSWNT+I+ ++G E L+++ M + G+ T AS LSAC + +
Sbjct: 2 PDRN-AVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLASVLSACGAVAALDDG 60
Query: 279 KEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQ 338
+ H +K GL + FV +G++ +Y KC
Sbjct: 61 RRCHGLAVKVGLDGHQFVENGLLGMYTKC------------------------------- 89
Query: 339 GNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVIL 398
G++ +A R FD + N V +TA+ G + + L + +++ G+ D + + +
Sbjct: 90 GSVADAVRLFDGMPSPNEVSFTAMMGGLAQGGAVDDALRLFAR-MSRTGIRVDPVAVSSV 148
Query: 399 LGACA--------LQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIF 450
LGACA + A+ + IHA ++R G D+ + ++LVD+Y+K M A +F
Sbjct: 149 LGACAQACAGDYNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVF 208
Query: 451 QNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVE 510
++ +V +N++I Y G E+A+ + E M E G +P+ VT+ +L++ V
Sbjct: 209 ESLSSVSIVSWNILITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLASCIKARDVP 268
Query: 511 MGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIP---TEEDAVILGSF 567
F+ + P + ++ YG+ ++ I+ + + + D L
Sbjct: 269 SARAMFDKIP-----KPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVI 323
Query: 568 LNVCRLNRNAELAGEAEEKLLRL 590
L+ C N EL + +RL
Sbjct: 324 LSSCSRLGNFELGKQVHSASVRL 346
>gi|7413540|emb|CAB86020.1| putative protein [Arabidopsis thaliana]
gi|9758453|dbj|BAB08982.1| selenium-binding protein-like [Arabidopsis thaliana]
Length = 864
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 170/538 (31%), Positives = 270/538 (50%), Gaps = 73/538 (13%)
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
V L LC + V + H +++ + ++ LI+ YSKC E A +VF+G
Sbjct: 56 VHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGML 115
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
E VSWNT+I Y +N E L +F
Sbjct: 116 ER---------------------------------SLVSWNTMIGLYTRNRMESEALDIF 142
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKC----AKEIHSWVLKNGLISNPFVSSGIVDV 303
+ M G +++E T +S LSAC V C K++H +K + N +V + ++D+
Sbjct: 143 LEMRNEGFKFSEFTISSVLSAC----GVNCDALECKKLHCLSVKTCIDLNLYVGTALLDL 198
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y KC G +++A + F+S+ +K+ V W+++
Sbjct: 199 YAKC-------------------------------GMIKDAVQVFESMQDKSSVTWSSMV 227
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
+GYV+ +N E LL + + + L ++ AC+ AAL GK++HA I + G
Sbjct: 228 AGYVQNKNYEEAL-LLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGF 286
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
+ + S+ VDMY+KCG++ + IIF E++L L+N +I+ +A H ++ ++LFE+
Sbjct: 287 GSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEK 346
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRAN 543
M + G+ P+ VTF ++LS H G VE G ++F M Y +SP HY+CM+D+ GRA
Sbjct: 347 MQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAG 406
Query: 544 QLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLAN 603
L +A E +KSIP + A I GS L CR+ +N ELA A EKL LE N +V L+N
Sbjct: 407 LLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSN 466
Query: 604 VYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+YAA W E+ + RK +R + G SW+ ++ ++H F+VG+ HP+ I S L
Sbjct: 467 IYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTL 524
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/441 (24%), Positives = 195/441 (44%), Gaps = 102/441 (23%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACI 67
EA CH + I+ L N LI+ YSK + +R++FD M ER++ SWNT+I
Sbjct: 71 EAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIG--- 127
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFT 127
L T N M E++AL +F+EM+ +E + EFT
Sbjct: 128 -------------------LYTRNRM----------ESEALDIFLEMR--NEGFKFSEFT 156
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
++S L+ C + ++LH VKT D + + ++L+D+Y+KC ++A +VFE
Sbjct: 157 ISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ 216
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
++ +V+W+++++GYVQN + EE L L+
Sbjct: 217 DK---------------------------------SSVTWSSMVAGYVQNKNYEEALLLY 243
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
R + N+ T +S + AC L + K++H+ + K+G SN FV+S VD+Y KC
Sbjct: 244 RRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKC 303
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
G++ E+ F + EKN+ +W + SG+
Sbjct: 304 -------------------------------GSLRESYIIFSEVQEKNLELWNTIISGFA 332
Query: 368 KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDK 427
K + + +L E + ++G+ + + LL C + G+ ++R +
Sbjct: 333 KHARPKEVM-ILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFK-LMRTTYGLSP 390
Query: 428 KLI--STLVDMYSKCGNMTYA 446
++ S +VD+ + G ++ A
Sbjct: 391 NVVHYSCMVDILGRAGLLSEA 411
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 152/443 (34%), Positives = 242/443 (54%), Gaps = 8/443 (1%)
Query: 227 WNTLISGYVQ-----NGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEI 281
WNTLI +VQ G + +FVRM +GV+ + HTF L + + + +
Sbjct: 27 WNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGRSV 86
Query: 282 HSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNM 341
H+ +L+ GL +PFV + ++ +Y C N+ +A + + S +S+I G +
Sbjct: 87 HAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINANFQAGLV 146
Query: 342 EEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF--VTKEGVVTDALILVILL 399
+ AR F + E+NV+ W+ + +GYV+ + L E + V + + +L
Sbjct: 147 DMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVL 206
Query: 400 GACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDL 458
AC AL GK HAYI + G+ +D L + L+DMY+KCG++ A +F N +D+
Sbjct: 207 AACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDV 266
Query: 459 VLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNS 518
+ ++ MI+ A HG E+ + LF +M+ +G++P+AVTF+A+ A H G V G+ Y
Sbjct: 267 MAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKDYLRR 326
Query: 519 MTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAE 578
MT DY I P HY CM+DLYGRA ++++A +KS+P E D ++ G+ L+ R++ + E
Sbjct: 327 MTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIE 386
Query: 579 LAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVE 638
A +KL+ LE N YV L+NVYA G W ++ +R M M + GCS + V
Sbjct: 387 TCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKVPGCSLIEVG 446
Query: 639 HEIHIFTVGDVSHPKTNAIYSVL 661
+H F VGD SHP+T I+ +L
Sbjct: 447 GVLHEFFVGDDSHPETRQIHMML 469
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 161/362 (44%), Gaps = 79/362 (21%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H Q ++ GL + LI +YS L +R++FDE+P+ ++ SWN+II+A ++ +
Sbjct: 87 HAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINANFQAGLV 146
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSAD-EHIRMDEFTVTST 131
AR+LF P +++++++ M+ GY+ Y+ +AL LF EMQ +R +EFT++
Sbjct: 147 DMARNLFAVMPERNVISWSCMINGYVRCGQYK-EALALFREMQMLGVNDVRPNEFTMSGV 205
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L C +L + G+ HA++ K ++LIDMY+KC E+A VF
Sbjct: 206 LAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPN-- 263
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
D ++W+ +ISG +G AEE + LF +M
Sbjct: 264 ------------------------------KDVMAWSAMISGLAMHGLAEECVGLFSKMI 293
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
GVR N TF + AC + GL+S E +
Sbjct: 294 NQGVRPNAVTFLAVFCAC----------------VHGGLVS---------------EGKD 322
Query: 312 YAESMLLLKGVRNSFSI-------SSMIVGYSLQGNMEEARRHFDSLT-EKNVVVWTALF 363
Y L+ + +SI M+ Y G ++EA S+ E +V+VW AL
Sbjct: 323 Y------LRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALL 376
Query: 364 SG 365
SG
Sbjct: 377 SG 378
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 197/446 (44%), Gaps = 79/446 (17%)
Query: 52 PERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLF 111
P F WNT+I A + QAR+ H + + M G + D
Sbjct: 20 PTLESFLWNTLIRAHV------QARAQPTGPTHSPISIFVRM-----RFHGVQPDFHTFP 68
Query: 112 IEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYS 171
+QS F S L+L GR +HA +++ F +SLI MYS
Sbjct: 69 FLLQS---------FASPSLLHL---------GRSVHAQILRFGLAIDPFVQTSLISMYS 110
Query: 172 KCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLI 231
C A +VF+ + +L S N+++ A + G ++MA F PE N +SW+ +I
Sbjct: 111 SCGNLGFARQVFDEIPQP-DLPSWNSIINANFQAGLVDMARNLFAVMPERN-VISWSCMI 168
Query: 232 SGYVQNGDAEEGLKLFVRM---GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKN 288
+GYV+ G +E L LF M G N VR NE T + L+AC L ++ K H+++ K
Sbjct: 169 NGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKC 228
Query: 289 GLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHF 348
G+ + + + ++D+Y KC G++E+A F
Sbjct: 229 GMPVDVVLGTALIDMYAKC-------------------------------GSVEKATWVF 257
Query: 349 DSL-TEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAA 407
+L K+V+ W+A+ SG E L S+ + +GV +A+ + + AC
Sbjct: 258 SNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMI-NQGVRPNAVTFLAVFCACVHGGL 316
Query: 408 LHPGKEIHAYILRMGVQMDKKLIST------LVDMYSKCGNMTYAEIIFQNF-IERDLVL 460
+ GK+ Y+ RM D +I T +VD+Y + G + A + ++ +E D+++
Sbjct: 317 VSEGKD---YLRRM--TEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLV 371
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLE 486
+ +++ HG E L ++++E
Sbjct: 372 WGALLSGSRMHGDIETCELALKKLIE 397
>gi|413935694|gb|AFW70245.1| hypothetical protein ZEAMMB73_875976 [Zea mays]
Length = 807
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 199/687 (28%), Positives = 320/687 (46%), Gaps = 113/687 (16%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L + CH A+K GL N L+ +Y+K + ++ +LFD M
Sbjct: 158 LDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGM-------------- 203
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
P + V++ +M+ G G DAL+LF M IR+D
Sbjct: 204 -----------------PSPNEVSFTAMMGGLAQG-GAVDDALRLFARMSRTG--IRVDP 243
Query: 126 FTVTSTLNLCVKL----LNVGFGRQL----HAFMVKTSNDASGFAVSSLIDMYSKCRCYE 177
V+S L C + NV QL HA +V+ + +SL+D+Y+K +
Sbjct: 244 VAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMD 303
Query: 178 EACRVFE--------------------GCTE--------------EVNLISKNAMVAACC 203
EA +VFE GC E E N ++ + M+A+C
Sbjct: 304 EAIKVFESLSSVSIVSWNILITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLASCI 363
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
+ ++ A F + P+ + +WNTL+SGY Q +E + LF RM V+ + T A
Sbjct: 364 KARDVPSARAMFDKIPKPS-VTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLA 422
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
LS+C L N + K++HS ++ L ++ FV+SG++D+Y KC + A
Sbjct: 423 VILSSCSRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIA---------- 472
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV 383
+I+ F+ +TE++VV W ++ SG E FD L + +
Sbjct: 473 -------LII--------------FNMMTERDVVCWNSMISGLAIHSLSEEAFDFLKQ-M 510
Query: 384 TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNM 443
+ G+ ++ CA +++ G+++HA +L+ G + + +L+DMY+K GNM
Sbjct: 511 RENGMFPTESSYASMINLCARLSSIPQGRQMHAQVLKDGYDQNVYVGCSLIDMYAKSGNM 570
Query: 444 TYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAF 503
A + F I ++LV +N MI YA +G EKA+ LFE ML KPD+VTF+A+L+
Sbjct: 571 DDARLFFNCMIVKNLVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGC 630
Query: 504 RHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVI 563
H G V+ +FNSM ++Y I+P +HY C+ID RA + + + +P ++D ++
Sbjct: 631 SHSGLVDEAVTFFNSMESNYGITPLVEHYTCLIDALARAARFAEVEAVIGKMPYKDDPIL 690
Query: 564 LGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQM-- 621
L C ++ NAEL + + L RL+ N + YV L+N+YA G + +R M
Sbjct: 691 WEVLLAACVVHHNAELGEFSAKHLFRLDPKNPSPYVLLSNIYATLGRHGDASAVRALMSS 750
Query: 622 RGMKGNRFAGCSWVYVEHEIHIFTVGD 648
RG+ R G SWV + F V D
Sbjct: 751 RGVVKGR--GYSWVNHKDGSRAFMVAD 775
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 149/594 (25%), Positives = 263/594 (44%), Gaps = 83/594 (13%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R + A H + + AGL T N+L+ +YS L + + F +P NV+S+N
Sbjct: 22 RKPSRSNAKAAHARVLAAGLAADTFLLNRLVELYSLSGLPCHALRAFRALPHPNVYSYNA 81
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
ISA ++ DL AR L P ++ V++N+++ + G +AL+++ M E +
Sbjct: 82 AISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAA-VARSGSPGEALEMYQGM--LQEGL 138
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
FT+ S L+ C + + GR+ H VK D F + L+ MY+KC +A R
Sbjct: 139 APTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVR 198
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F+G N +S AM+ + G + +
Sbjct: 199 LFDGMPSP-NEVSFTAMMGGLAQGGAV--------------------------------D 225
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSAC---CG-----LRNVKCAKEIHSWVLKNGLISN 293
+ L+LF RM G+R + +S L AC C R ++ A+ IH+ V++ G S+
Sbjct: 226 DALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKGFGSD 285
Query: 294 PFVSSGIVDVYCKCENMN-----------------------------YAESMLLLKGVR- 323
V + +VD+Y K M+ Y +M +L+ ++
Sbjct: 286 QHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAMEVLEFMQE 345
Query: 324 -----NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDL 378
N + S+M+ ++ AR FD + + +V W L SGY + + + DL
Sbjct: 346 SGFEPNEVTYSNMLASCIKARDVPSARAMFDKIPKPSVTTWNTLLSGYGQEELHQETIDL 405
Query: 379 LSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYS 438
+ + V D L ++L +C+ GK++H+ +R+ + D + S L+D+YS
Sbjct: 406 FRR-MQHQNVQPDRTTLAVILSSCSRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYS 464
Query: 439 KCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVA 498
KCG + A IIF ERD+V +N MI+ A H E+A ++M E G+ P ++ +
Sbjct: 465 KCGQVGIALIIFNMMTERDVVCWNSMISGLAIHSLSEEAFDFLKQMRENGMFPTESSYAS 524
Query: 499 ILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC-MIDLYGRANQLEKAIEF 551
+++ S+ G + + D + + C +ID+Y ++ ++ A F
Sbjct: 525 MINLCARLSSIPQGRQMHAQVLKDGY--DQNVYVGCSLIDMYAKSGNMDDARLF 576
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/454 (25%), Positives = 203/454 (44%), Gaps = 50/454 (11%)
Query: 148 HAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGE 207
HA ++ A F ++ L+++YS A R F N+ S NA ++A CR G+
Sbjct: 33 HARVLAAGLAADTFLLNRLVELYSLSGLPCHALRAFRALPHP-NVYSYNAAISAACRAGD 91
Query: 208 MEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALS 267
+ A R P+ N AVSWNT+I+ ++G E L+++ M + G+ T AS LS
Sbjct: 92 LAAARDLLGRMPDRN-AVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLASVLS 150
Query: 268 ACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFS 327
AC + + + H +K GL + FV +G++ +Y KC
Sbjct: 151 ACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKC-------------------- 190
Query: 328 ISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEG 387
G++ +A R FD + N V +TA+ G + + L + +++ G
Sbjct: 191 -----------GSVADAVRLFDGMPSPNEVSFTAMMGGLAQGGAVDDALRLFAR-MSRTG 238
Query: 388 VVTDALILVILLGACA--------LQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
+ D + + +LGACA + A+ + IHA ++R G D+ + ++LVD+Y+K
Sbjct: 239 IRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAK 298
Query: 440 CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
M A +F++ +V +N++I Y G E+A+ + E M E G +P+ VT+ +
Sbjct: 299 GMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNM 358
Query: 500 LSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIP--- 556
L++ V F+ + P + ++ YG+ ++ I+ + +
Sbjct: 359 LASCIKARDVPSARAMFDKIP-----KPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQN 413
Query: 557 TEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRL 590
+ D L L+ C N EL + +RL
Sbjct: 414 VQPDRTTLAVILSSCSRLGNFELGKQVHSASVRL 447
>gi|449462338|ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 675
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 179/610 (29%), Positives = 308/610 (50%), Gaps = 41/610 (6%)
Query: 56 VFSWNTIISACI--KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIE 113
+F + +++ C S D+ A +FD + + +N+M+ GY A + + F +
Sbjct: 84 IFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFWNTMIKGYCKAN-HPSMGFSFFRQ 142
Query: 114 MQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKC 173
M D + L C + G +H+ + K D+ F + LI Y +
Sbjct: 143 M--IRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLIQNYVET 200
Query: 174 RCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISG 233
C A ++F+ + + D V+W T+I+G
Sbjct: 201 GCLGFARQMFD---------------------------------ESSVKDVVTWTTMING 227
Query: 234 YVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISN 293
Y +N +E + LF M + V+ NE T + LSAC + + K +H + + + +
Sbjct: 228 YARNNWLDEAIALFNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCS 287
Query: 294 PFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
+ + ++D+Y KC + A + R+ FS +S++ GY+ G++ AR+ FD + E
Sbjct: 288 LNLLNAMLDMYVKCGCLTTAREIFNNMERRDVFSWTSLLNGYAKNGDLGSARKLFDEMPE 347
Query: 354 KNVVVWTALFSGYVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
+N+V W A+ +GY + +Q EAL +L V G+V LV +L A L G+
Sbjct: 348 RNIVSWNAMIAGYSQNSQPMEAL-ELFHNMVDVVGLVPTEDTLVCVLSASGQLGCLEMGQ 406
Query: 413 EIHA-YILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
EIH ++ ++G+Q+ L + ++DMY+KCG++ A +F + E++LV +N MI+ YA +
Sbjct: 407 EIHCNHVNKIGIQVSLILKNAVMDMYAKCGSIDAAAKLFHSMPEKNLVSWNSMISAYASY 466
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH 531
GH +KA+ LF++M+ G+KPD +TF+ +LSA + G V G+ +F SM + + P+ +H
Sbjct: 467 GHAKKALTLFDQMIGSGLKPDHITFIGVLSACSYGGFVSEGQAHFESMENCFGVEPKREH 526
Query: 532 YACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLE 591
YACM+DL R L++A E + +P E G+ L+ CR + N E+A A EKLL L+
Sbjct: 527 YACMVDLLSRVGLLKEAYELISRMPMEASEGGWGALLDACRKHGNVEMAKLAGEKLLELD 586
Query: 592 GNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSH 651
+ Y LAN+ A W ++ +R+ MR + G S + +E + H F V D SH
Sbjct: 587 PEDSGIYSLLANICADGKKWKDVRMVRRMMRERGVKKVPGHSLIEIEGKFHEFLVADTSH 646
Query: 652 PKTNAIYSVL 661
+++ IY V+
Sbjct: 647 TRSSEIYRVV 656
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 120/500 (24%), Positives = 220/500 (44%), Gaps = 80/500 (16%)
Query: 9 ALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIK 68
+ H K G N LI Y + L +R++FDE ++V +W T+I+ +
Sbjct: 171 GMAVHSVIWKRGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYAR 230
Query: 69 SHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
++ L +A +LF+S M S+D ++ +E T+
Sbjct: 231 NNWLDEAIALFNS--------------------------------MLSSD--VKPNEVTM 256
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE 188
+ L+ C + + G+ LH + + S +++++DMY KC C A +F E
Sbjct: 257 IALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLDMYVKCGCLTTAREIFNN-ME 315
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
++ S +++ + G++ A K F PE N VSWN +I+GY QN E L+LF
Sbjct: 316 RRDVFSWTSLLNGYAKNGDLGSARKLFDEMPERN-IVSWNAMIAGYSQNSQPMEALELFH 374
Query: 249 RMGE-NGVRWNEHTFASALSACCGLRNVKCAKEIH-SWVLKNGLISNPFVSSGIVDVYCK 306
M + G+ E T LSA L ++ +EIH + V K G+ + + + ++D+Y K
Sbjct: 375 NMVDVVGLVPTEDTLVCVLSASGQLGCLEMGQEIHCNHVNKIGIQVSLILKNAVMDMYAK 434
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
C G+++ A + F S+ EKN+V W ++ S Y
Sbjct: 435 C-------------------------------GSIDAAAKLFHSMPEKNLVSWNSMISAY 463
Query: 367 VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM----G 422
+ + L + + G+ D + + +L AC+ + G+ A+ M G
Sbjct: 464 ASYGHAKKALTLFDQMI-GSGLKPDHITFIGVLSACSYGGFVSEGQ---AHFESMENCFG 519
Query: 423 VQMDKKLISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
V+ ++ + +VD+ S+ G + A E+I + +E + ++ HG+ E A L
Sbjct: 520 VEPKREHYACMVDLLSRVGLLKEAYELISRMPMEASEGGWGALLDACRKHGNVEMAKLAG 579
Query: 482 EEMLEKGIKPDAVTFVAILS 501
E++LE + P+ ++L+
Sbjct: 580 EKLLE--LDPEDSGIYSLLA 597
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 168/406 (41%), Gaps = 68/406 (16%)
Query: 186 CTEEVNLISKNAMVAACC---REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
CT +N I + + A C G++ A F Q EL + WNT+I GY +
Sbjct: 77 CTGLMNQIFPASRLLAFCALSDSGDIHYAHLIF-DQTELPNCFFWNTMIKGYCKANHPSM 135
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
G F +M N ++ +F AL AC +HS + K G S+ FV +G++
Sbjct: 136 GFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLIQ 195
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
Y + + +A M V++ + ++MI GY+ ++EA F+S+ +V
Sbjct: 196 NYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIALFNSMLSSDV------ 249
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
K VT ++ LL AC+ + GK +H +I R
Sbjct: 250 ----------------------KPNEVT----MIALLSACSQKGDSEMGKTLHEHIRRKD 283
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQN------------------------------ 452
+ L++ ++DMY KCG +T A IF N
Sbjct: 284 ITCSLNLLNAMLDMYVKCGCLTTAREIFNNMERRDVFSWTSLLNGYAKNGDLGSARKLFD 343
Query: 453 -FIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE-KGIKPDAVTFVAILSAFRHCGSVE 510
ER++V +N MIA Y+ + +A+ LF M++ G+ P T V +LSA G +E
Sbjct: 344 EMPERNIVSWNAMIAGYSQNSQPMEALELFHNMVDVVGLVPTEDTLVCVLSASGQLGCLE 403
Query: 511 MGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIP 556
MG++ + I ++D+Y + ++ A + S+P
Sbjct: 404 MGQEIHCNHVNKIGIQVSLILKNAVMDMYAKCGSIDAAAKLFHSMP 449
>gi|356518777|ref|XP_003528054.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 737
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 168/531 (31%), Positives = 268/531 (50%), Gaps = 48/531 (9%)
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
C+ V +H ++KT+ F + LID YSKC C E A + F
Sbjct: 20 CITARRVKLANAVHGHLIKTALFFDAFLANGLIDAYSKCGCEESAHKTFG---------- 69
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
++ KT SWNTLIS Y + G +E LF +M +
Sbjct: 70 --------------DLPNKT---------TRSWNTLISFYSKTGFFDEAHNLFDKMPQRN 106
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
V ++ S +S N++ +++H + G+ N +++ ++D Y KC N +
Sbjct: 107 VV----SYNSLISG-----NLQWLRQVHGVAVIVGMEWNVILNNALIDAYGKCGEPNLSF 157
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEA 374
S+ RN S +SM+V Y+ ++EA R F + KN V WTAL +G+V+ C+
Sbjct: 158 SVFCYMPERNVVSWTSMVVAYTRACRLDEACRVFKDMPVKNTVSWTALLTGFVRNGGCDE 217
Query: 375 LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR---MGVQMDKKLIS 431
FD+ + + +EGV A V ++ ACA +A + GK++H I+R G + + +
Sbjct: 218 AFDVFKQML-EEGVRPSAPTFVSVIDACAQEALIGRGKQVHGQIIRGDKSGNLFNVYVCN 276
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
L+DMY+KCG+M AE +F+ RD+V +N +I +A +GH E+++ +F M+E ++P
Sbjct: 277 ALIDMYAKCGDMKSAENLFEMAPMRDVVTWNTLITGFAQNGHGEESLAVFRRMIEAKVEP 336
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
+ VTF+ +LS H G G + + M Y + P+ +HYA +IDL GR N+L +A+
Sbjct: 337 NHVTFLGVLSGCNHAGLDNEGLQLVDLMERQYGVKPKAEHYALLIDLLGRRNRLMEAMSL 396
Query: 552 MKSIPT--EEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEG 609
++ +P + + G+ L CR++ N +LA +A EKL LE N RYV LAN+YAA G
Sbjct: 397 IEKVPDGIKNHIAVWGAVLGACRVHGNLDLARKAAEKLFELEPENTGRYVMLANIYAASG 456
Query: 610 NWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSV 660
W RIR M+ + CS + + + H F D HP+ I V
Sbjct: 457 KWGGAKRIRNVMKERCLEKEPACSRIELRNARHEFVAKDKFHPQVEEICEV 507
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 172/368 (46%), Gaps = 54/368 (14%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
+K A H IK L N LI YSK + K F ++P + SWNT+IS
Sbjct: 26 VKLANAVHGHLIKTALFFDAFLANGLIDAYSKCGCEESAHKTFGDLPNKTTRSWNTLISF 85
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
K+ +A +LFD P +++V+YNS++ G
Sbjct: 86 YSKTGFFDEAHNLFDKMPQRNVVSYNSLISG----------------------------- 116
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
N+ + RQ+H V + + ++LID Y KC + VF
Sbjct: 117 --------------NLQWLRQVHGVAVIVGMEWNVILNNALIDAYGKCGEPNLSFSVF-- 160
Query: 186 C-TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
C E N++S +MV A R ++ A + F P + + VSW L++G+V+NG +E
Sbjct: 161 CYMPERNVVSWTSMVVAYTRACRLDEACRVFKDMP-VKNTVSWTALLTGFVRNGGCDEAF 219
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVL---KNGLISNPFVSSGIV 301
+F +M E GVR + TF S + AC + K++H ++ K+G + N +V + ++
Sbjct: 220 DVFKQMLEEGVRPSAPTFVSVIDACAQEALIGRGKQVHGQIIRGDKSGNLFNVYVCNALI 279
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEA----RRHFDSLTEKNVV 357
D+Y KC +M AE++ + +R+ + +++I G++ G+ EE+ RR ++ E N V
Sbjct: 280 DMYAKCGDMKSAENLFEMAPMRDVVTWNTLITGFAQNGHGEESLAVFRRMIEAKVEPNHV 339
Query: 358 VWTALFSG 365
+ + SG
Sbjct: 340 TFLGVLSG 347
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 168/359 (46%), Gaps = 45/359 (12%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTI 62
S NL+ H A+ G+ I N LI Y K S +F MPERNV SW ++
Sbjct: 115 SGNLQWLRQVHGVAVIVGMEWNVILNNALIDAYGKCGEPNLSFSVFCYMPERNVVSWTSM 174
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
+ A ++ L +A +F P K+ V++ ++L G++ G + +A +F +M +E +R
Sbjct: 175 VVAYTRACRLDEACRVFKDMPVKNTVSWTALLTGFVRNGGCD-EAFDVFKQM--LEEGVR 231
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV---SSLIDMYSKCRCYEEA 179
T S ++ C + +G G+Q+H +++ + F V ++LIDMY+KC
Sbjct: 232 PSAPTFVSVIDACAQEALIGRGKQVHGQIIRGDKSGNLFNVYVCNALIDMYAKC------ 285
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
G+M+ A F P + D V+WNTLI+G+ QNG
Sbjct: 286 --------------------------GDMKSAENLFEMAP-MRDVVTWNTLITGFAQNGH 318
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSAC--CGLRNVKCAKEIHSWVLKNGLISNPFVS 297
EE L +F RM E V N TF LS C GL N + + + + G+
Sbjct: 319 GEESLAVFRRMIEAKVEPNHVTFLGVLSGCNHAGLDN-EGLQLVDLMERQYGVKPKAEHY 377
Query: 298 SGIVDVYCKCENMNYAESML--LLKGVRNSFSISSMIVGY-SLQGNMEEARRHFDSLTE 353
+ ++D+ + + A S++ + G++N ++ ++G + GN++ AR+ + L E
Sbjct: 378 ALLIDLLGRRNRLMEAMSLIEKVPDGIKNHIAVWGAVLGACRVHGNLDLARKAAEKLFE 436
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 132/327 (40%), Gaps = 74/327 (22%)
Query: 266 LSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNS 325
+S C R VK A +H ++K L + F+++G++D Y KC A + +
Sbjct: 17 ISKCITARRVKLANAVHGHLIKTALFFDAFLANGLIDAYSKCGCEESAHKTFGDLPNKTT 76
Query: 326 FSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTK 385
S +++I YS G +EA FD + ++NVV + +L SG N + L
Sbjct: 77 RSWNTLISFYSKTGFFDEAHNLFDKMPQRNVVSYNSLISG-----NLQWL---------- 121
Query: 386 EGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTY 445
+++H + +G++ + L + L+D Y KCG
Sbjct: 122 --------------------------RQVHGVAVIVGMEWNVILNNALIDAYGKCGEPNL 155
Query: 446 AEIIFQNFIERDLVLYNVMIACYA-------------------------------HHGHE 474
+ +F ER++V + M+ Y +G
Sbjct: 156 SFSVFCYMPERNVVSWTSMVVAYTRACRLDEACRVFKDMPVKNTVSWTALLTGFVRNGGC 215
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC 534
++A +F++MLE+G++P A TFV+++ A + G++ + K + Y C
Sbjct: 216 DEAFDVFKQMLEEGVRPSAPTFVSVIDACAQEALIGRGKQVHGQIIRGDKSGNLFNVYVC 275
Query: 535 --MIDLYGRANQLEKAIEFMKSIPTEE 559
+ID+Y + ++ A + P +
Sbjct: 276 NALIDMYAKCGDMKSAENLFEMAPMRD 302
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 76/188 (40%), Gaps = 31/188 (16%)
Query: 397 ILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER 456
L+ C + +H ++++ + D L + L+D YSKCG A F + +
Sbjct: 15 FLISKCITARRVKLANAVHGHLIKTALFFDAFLANGLIDAYSKCGCEESAHKTFGDLPNK 74
Query: 457 DLVLYNVMIACYAHHGHEEKAILLFEEMLEK--------------------------GIK 490
+N +I+ Y+ G ++A LF++M ++ G++
Sbjct: 75 TTRSWNTLISFYSKTGFFDEAHNLFDKMPQRNVVSYNSLISGNLQWLRQVHGVAVIVGME 134
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
+ + A++ A+ CG + F M +S + M+ Y RA +L++A
Sbjct: 135 WNVILNNALIDAYGKCGEPNLSFSVFCYMPERNVVS-----WTSMVVAYTRACRLDEACR 189
Query: 551 FMKSIPTE 558
K +P +
Sbjct: 190 VFKDMPVK 197
>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 151/484 (31%), Positives = 268/484 (55%), Gaps = 33/484 (6%)
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
+ +L++ N ++ + G ++ A + F P VSWNT+I QNG+ E L L +
Sbjct: 96 KTDLLTSNILINMYSKCGSVDFARQVFDEMPS-RSLVSWNTMIGSLTQNGEENEALDLLL 154
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
+M G ++E T +S L AC + + +H++ +K + N FV++ ++DVY KC
Sbjct: 155 QMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKC- 213
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
G M++A F+S+ +++VV W+++ +GYV+
Sbjct: 214 ------------------------------GLMKDAVCVFESMPDRSVVTWSSMAAGYVQ 243
Query: 369 AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK 428
+ E L + + G+ D ++ ++ ACA AA+ GK+++A + + G +
Sbjct: 244 NEMYEQALALFRK-AWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIF 302
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
+ S+L+DMY+KCG + + +F++ +R++VL+N MI+ + H + ++LFE+M + G
Sbjct: 303 VASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMG 362
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
+ P+ VTFV++LSA H G V+ G+KYF+ MT ++ ++P HY+CM+D RA Q+ +A
Sbjct: 363 LSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEA 422
Query: 549 IEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAE 608
+ + +P A + GS L CR + N ELA A +KL +E +N Y+ L+N+YAA
Sbjct: 423 YDLISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAAN 482
Query: 609 GNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
G W E+ ++RK ++ + G SW+ ++ ++H+F VG+ +HPK IYS L EL
Sbjct: 483 GKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDEL 542
Query: 669 YEIA 672
++
Sbjct: 543 QKLG 546
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 183/403 (45%), Gaps = 101/403 (25%)
Query: 12 CHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHD 71
CH Q + GL +T+N LI++YSK + +R++FDEMP R++ SWNT+I
Sbjct: 86 CHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMI-------- 137
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
G + G E +AL L ++MQ E EFT++S
Sbjct: 138 ------------------------GSLTQNGEENEALDLLLQMQR--EGTPFSEFTISSV 171
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L C + + LHAF +K + D + F ++L+D+Y+KC ++A VFE +
Sbjct: 172 LCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDR-- 229
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
V+W+++ +GYVQN E+ L LF +
Sbjct: 230 -------------------------------SVVTWSSMAAGYVQNEMYEQALALFRKAW 258
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
E G++ ++ +S + AC GL + K++++ + K+G SN FV+S ++D+Y KC
Sbjct: 259 ETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKC---- 314
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK-AQ 370
G +EE+ + F + ++NVV+W A+ SG + A+
Sbjct: 315 ---------------------------GGIEESYKVFRDVEKRNVVLWNAMISGLSRHAR 347
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
+ E + +L E + + G+ + + V +L AC + G++
Sbjct: 348 SLEVM--ILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQK 388
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 61/120 (50%)
Query: 383 VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGN 442
TK+ T + +L CA + L GK HA IL MG++ D + L++MYSKCG+
Sbjct: 55 TTKDFNATHVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGS 114
Query: 443 MTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
+ +A +F R LV +N MI +G E +A+ L +M +G T ++L A
Sbjct: 115 VDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCA 174
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 107/254 (42%), Gaps = 61/254 (24%)
Query: 18 KAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARS 77
K+G + LI +Y+K + ES K+F ++ +RNV WN +IS + ARS
Sbjct: 294 KSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLS-----RHARS 348
Query: 78 LFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVK 137
L + + LF +MQ + ++ T S L+ C
Sbjct: 349 L---------------------------EVMILFEKMQQMG--LSPNDVTFVSVLSACGH 379
Query: 138 LLNVGFGRQLHAFMVKTSNDASG-FAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISK- 195
+ V G++ M K + A F S ++D S+ A ++FE +LISK
Sbjct: 380 MGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSR------AGQIFEA----YDLISKL 429
Query: 196 ---------NAMVAACCREGEMEM----ALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
+++A+C G +E+ A K F +P +++ ++ L + Y NG +E
Sbjct: 430 PFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEP--HNSGNYLLLSNMYAANGKWDE 487
Query: 243 GLKLFVRMGENGVR 256
K+ + E+ V+
Sbjct: 488 VAKMRKLLKESDVK 501
>gi|125603224|gb|EAZ42549.1| hypothetical protein OsJ_27115 [Oryza sativa Japonica Group]
Length = 696
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 191/653 (29%), Positives = 311/653 (47%), Gaps = 102/653 (15%)
Query: 16 AIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQA 75
A+K+GL + L+ +Y+K +R++R++FD MPERN SWN +I+ +S D+
Sbjct: 119 ALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDM--- 175
Query: 76 RSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLC 135
A AL+LF+EM+ E + DE T S L
Sbjct: 176 -----------------------------ASALELFLEMER--EGLAPDEATFASLLT-A 203
Query: 136 VKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISK 195
V+ + QLH +VK + +++ I YS+C +++ R+F+G + +LIS
Sbjct: 204 VEGPSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISW 263
Query: 196 NAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR-MGENG 254
NAM+ A Y NG +E +K FVR M E+G
Sbjct: 264 NAMLGA--------------------------------YTHNGMDDEAMKFFVRMMQESG 291
Query: 255 VRWNEHTFASALSACCGL-RNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA 313
V + ++F S +S+C + + IH V+K+ L V + ++ +Y + Y
Sbjct: 292 VHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTR-----YN 346
Query: 314 ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE 373
E+ + ME+A + F+SL K+ V W ++ +GY +
Sbjct: 347 ENCM-----------------------MEDAYKCFNSLVLKDTVSWNSMLTGYSQ-HGLS 382
Query: 374 ALFDLLSEF--VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
A D L F + E V TD L + + A L GK+IH ++ G + + S
Sbjct: 383 A--DALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSS 440
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
+L+ MYSK G + A F+ + V +N MI YA HG E +LF EML++
Sbjct: 441 SLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPL 500
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
D +TFV ++++ H G V+ G + N+M Y + +HYAC +DLYGRA QL+KA +
Sbjct: 501 DHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKL 560
Query: 552 MKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNW 611
+ S+P E DA++ + L CR++ N ELA + L E + YV L+++Y+ G W
Sbjct: 561 IDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVAEPRQHSTYVLLSSMYSGLGMW 620
Query: 612 AEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIF 664
++ +++ M+ ++ G SW+ V++E+H F D SHPK + IY +L +
Sbjct: 621 SDRATVQRVMKKRGLSKVPGWSWIEVKNEVHSFNAEDKSHPKMDEIYEMLRVL 673
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 113/469 (24%), Positives = 204/469 (43%), Gaps = 99/469 (21%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPE-RNVFSWNTIISACIKSHD 71
H + +K G L N I YS+ L++SR++FD + + R++ SWN ++ A
Sbjct: 216 HGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGA------ 269
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
T+N G + +A+K F+ M + + D ++ TS
Sbjct: 270 ----------------YTHN----------GMDDEAMKFFVRMMQ-ESGVHPDMYSFTSI 302
Query: 132 LNLCVKLLNVGF-GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
++ C + + GR +H ++K++ + ++LI MY++ Y E C
Sbjct: 303 ISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTR---YNENCM--------- 350
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
ME A K F L D VSWN++++GY Q+G + + LK F M
Sbjct: 351 -----------------MEDAYKCF-NSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCM 392
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
VR +E+ F++AL + L ++ K+IH V+ +G SN FVS
Sbjct: 393 CSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVS------------- 439
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
SS+I YS G +++AR+ F+ + + V W A+ GY +
Sbjct: 440 ------------------SSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHG 481
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI-HAYILRMGVQMDKKL 429
E + L +E + ++ + D + V L+ +C+ + G EI + + GV + +
Sbjct: 482 QAENVDILFNEMLQRKAPL-DHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEH 540
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKA 477
+ VD+Y + G + A+ + + E D +++ ++ HG+ E A
Sbjct: 541 YACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELA 589
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 151/353 (42%), Gaps = 38/353 (10%)
Query: 196 NAMVAACCREGE--MEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGEN 253
N ++ A R + A + F P D VSWN L++ +G E +L M
Sbjct: 29 NQLLTAYSRSSPDGLAAARRVFDEVPR-RDEVSWNALLAAQAASGAHPEAWRLLRAMHAQ 87
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA 313
G+ N SAL + R ++ S LK+GL +N F +S ++DVY KC + A
Sbjct: 88 GLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDA 147
Query: 314 ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE 373
+ RN+ S +++I GY+ G+M A F + + + A F+ + A
Sbjct: 148 RQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVEGP 207
Query: 374 ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL 433
+ F + ++H I++ G + +++
Sbjct: 208 SCFLM---------------------------------HQLHGKIVKYGSALGLTVLNAA 234
Query: 434 VDMYSKCGNMTYAEIIFQNFIE-RDLVLYNVMIACYAHHGHEEKAILLFEEML-EKGIKP 491
+ YS+CG++ + IF + RDL+ +N M+ Y H+G +++A+ F M+ E G+ P
Sbjct: 235 ITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHP 294
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
D +F +I+S+ G + + + + + T +I +Y R N+
Sbjct: 295 DMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNE 347
>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 749
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 184/676 (27%), Positives = 310/676 (45%), Gaps = 118/676 (17%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACI 67
EA + H +K G L+++YSK ++ + K+FD +P RNV +W T+++ +
Sbjct: 76 EARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYV 135
Query: 68 K-SHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEF 126
+ SH L AL+LFI+M A + +
Sbjct: 136 QNSHPLL---------------------------------ALQLFIKMLEAGAY--PSNY 160
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
T+ LN C L ++ FG+Q+HA+++K D +SL YSK R E A + F+
Sbjct: 161 TLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFK-I 219
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
+E ++IS +++++CC NG A L
Sbjct: 220 IKEKDVISWTSVISSCC--------------------------------DNGQAARSLSF 247
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
F+ M +G++ NE+T S LSACC + + +IHS +K G S+ + + I+ +Y K
Sbjct: 248 FMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLK 307
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
C G + EA++ F+ + N+V W A+ +G+
Sbjct: 308 C-------------------------------GWLIEAQKLFEGMETLNLVTWNAMIAGH 336
Query: 367 VKAQNCE--------------ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
K + A+F L + G+ D +L C+ AL G+
Sbjct: 337 AKMMDLAEDDVAAHKSGSTALAMFQKL----YRSGMKPDLFTFSSVLSVCSNLVALEQGE 392
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
+IH I++ GV D + + LV MY+KCG++ A F R ++ + MI +A HG
Sbjct: 393 QIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHG 452
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
++A+ LFE+M GIKP+ VTFV +LSA H G + YF M Y I P DH+
Sbjct: 453 LSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHF 512
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
AC+ID+Y R ++E+A + + + E + I + CR + ++L A E+LL+L+
Sbjct: 513 ACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKP 572
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
+ YV L N++ + G W ++ ++RK M+ K + SW+ ++ +++ F D SH
Sbjct: 573 KDVETYVSLLNMHISAGRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHC 632
Query: 653 KTNAIYSVLAIFTGEL 668
++ +Y +L E+
Sbjct: 633 QSLEMYKLLETVLNEV 648
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 86/180 (47%), Gaps = 2/180 (1%)
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD 457
LL C + + IH +I++ G D +++ LV++YSKCG M A +F N R+
Sbjct: 64 LLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRN 123
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFN 517
+ + ++ Y + H A+ LF +MLE G P T +L+A S+E G K +
Sbjct: 124 VNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFG-KQVH 182
Query: 518 SMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNA 577
+ Y I +T + Y + +LE AI+ K I E+D + S ++ C N A
Sbjct: 183 AYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKII-KEKDVISWTSVISSCCDNGQA 241
>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Brachypodium distachyon]
Length = 868
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 193/604 (31%), Positives = 298/604 (49%), Gaps = 73/604 (12%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADA-LKLFIEMQSAD 118
N +++ K D++ AR +FD D +++N+M+ G+ E +E +A L+LF+ M +
Sbjct: 234 NALVTMYAKCGDVEAARKVFDGMSLTDCISWNAMIAGHF--ENHECEAGLELFLHM--LE 289
Query: 119 EHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEE 178
+ + + T+TS L ++ F +++HA VK +SLI MYS E
Sbjct: 290 DEVEPNLMTITSVTVASGLLSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGE 349
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
AC VF + E DA+SW +ISGY +NG
Sbjct: 350 ACTVFS---------------------------------RMETRDAMSWTAMISGYEKNG 376
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
++ L+++ M N V ++ T ASAL+AC L + ++H G I V++
Sbjct: 377 FPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIVVAN 436
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
+V++Y K S I+ E+A F + +K+V+
Sbjct: 437 ALVEMYAK-----------------------SKII--------EKAIEVFKYMPDKDVIS 465
Query: 359 WTALFSGY-VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
W+++ +G+ +N EAL+ V +++ + L ACA +L GKEIHA+
Sbjct: 466 WSSMIAGFCFNHKNFEALYYFRHMLAD---VKPNSVTFIAALAACAATGSLRCGKEIHAH 522
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
+LR G+ + + + L+D+Y KCG YA F +D+V +N+M+A + HGH + A
Sbjct: 523 VLRQGIASEGYVPNALLDLYVKCGQTGYAWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIA 582
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID 537
+ F EMLE G PD VTFVA+L G V G + F+SMT Y I P HYACM+D
Sbjct: 583 LSFFNEMLETGEHPDEVTFVALLCGCSRAGMVSQGWELFHSMTEKYSIVPNLKHYACMVD 642
Query: 538 LYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKAR 597
L R +L + F+ +P DA + G+ LN CR++RN EL A + +L LE N+
Sbjct: 643 LLSRVGRLTEGYNFINRMPITPDAAVWGALLNGCRIHRNIELGELAAKIVLELEPNDAGY 702
Query: 598 YVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
+V L+++YA G WAE+ ++RK MR GCSWV V+ IH F D SHP+ I
Sbjct: 703 HVLLSDLYADAGMWAEVSKVRKTMRVKGLEHDYGCSWVEVKGAIHAFLTDDESHPQIKEI 762
Query: 658 YSVL 661
VL
Sbjct: 763 NDVL 766
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 173/364 (47%), Gaps = 34/364 (9%)
Query: 196 NAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGV 255
NAM++ R GE A K F + PE D SWN ++ GY + G EE L L+ RM G
Sbjct: 133 NAMLSMLVRFGETWHAWKVFAKMPE-RDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGA 191
Query: 256 RWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAES 315
R + +TF L +C G+ ++ +E+H+ VL+ GL V + +V +Y KC
Sbjct: 192 RPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKC-------- 243
Query: 316 MLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEAL 375
G++E AR+ FD ++ + + W A+ +G+ + CEA
Sbjct: 244 -----------------------GDVEAARKVFDGMSLTDCISWNAMIAGHFENHECEAG 280
Query: 376 FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVD 435
+L + E V + + + + A L + L KEIHA ++ G D ++L+
Sbjct: 281 LELFLHMLEDE-VEPNLMTITSVTVASGLLSDLDFAKEIHALAVKRGFATDVAFCNSLIQ 339
Query: 436 MYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVT 495
MYS G M A +F RD + + MI+ Y +G +KA+ ++ M + PD VT
Sbjct: 340 MYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDVT 399
Query: 496 FVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSI 555
+ L+A G +++G K T+ I A ++++Y ++ +EKAIE K +
Sbjct: 400 VASALAACASLGRLDVGIKLHELATSKGFIRYIVVANA-LVEMYAKSKIIEKAIEVFKYM 458
Query: 556 PTEE 559
P ++
Sbjct: 459 PDKD 462
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 127/487 (26%), Positives = 217/487 (44%), Gaps = 74/487 (15%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N ++S ++ + A +F P +D+ ++N M+ GY A G+ +AL L+ M A
Sbjct: 133 NAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKA-GFLEEALDLYHRMLWAGA 191
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
R D +T L C + ++ GR++HA +++ +++L+ MY+KC E A
Sbjct: 192 --RPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAA 249
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
+VF+G + L D +SWN +I+G+ +N +
Sbjct: 250 RKVFDGMS---------------------------------LTDCISWNAMIAGHFENHE 276
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
E GL+LF+ M E+ V N T S A L ++ AKEIH+ +K G ++
Sbjct: 277 CEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHALAVKRGFATDV----- 331
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
+C +S+I YS G M EA F + ++ + W
Sbjct: 332 ---AFC-----------------------NSLIQMYSSLGRMGEACTVFSRMETRDAMSW 365
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
TA+ SGY K + ++ + + V D + + L ACA L G ++H
Sbjct: 366 TAMISGYEKNGFPDKALEVYA-LMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELAT 424
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIA--CYAHHGHEEKA 477
G + + LV+MY+K + A +F+ ++D++ ++ MIA C+ H E A
Sbjct: 425 SKGFIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFE--A 482
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID 537
+ F ML +KP++VTF+A L+A GS+ G K ++ I+ E ++D
Sbjct: 483 LYYFRHMLAD-VKPNSVTFIAALAACAATGSLRCG-KEIHAHVLRQGIASEGYVPNALLD 540
Query: 538 LYGRANQ 544
LY + Q
Sbjct: 541 LYVKCGQ 547
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 91/182 (50%), Gaps = 4/182 (2%)
Query: 321 GVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLS 380
G+R ++ SM+V + G A + F + E++V W + GY KA E DL
Sbjct: 128 GLRLGNAMLSMLVRF---GETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYH 184
Query: 381 EFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC 440
+ G D +L +C L G+E+HA++LR G+ ++ +++ LV MY+KC
Sbjct: 185 RMLWA-GARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKC 243
Query: 441 GNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAIL 500
G++ A +F D + +N MIA + + E + LF MLE ++P+ +T ++
Sbjct: 244 GDVEAARKVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVT 303
Query: 501 SA 502
A
Sbjct: 304 VA 305
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 178/557 (31%), Positives = 266/557 (47%), Gaps = 67/557 (12%)
Query: 106 DALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS 165
AL L+ +M + R + FT L C L G Q H + K F +
Sbjct: 32 QALSLYPQMLRHGD--RPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTG 89
Query: 166 LIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAV 225
LI MY K + A +VFE N S+ V
Sbjct: 90 LISMYCKGSLVDNARKVFEE-----NFHSRKL--------------------------TV 118
Query: 226 SWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWV 285
+N L+SGYV N E + LF +M E GV N T + AC N++ +H
Sbjct: 119 CYNALVSGYVSNSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCST 178
Query: 286 LKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEAR 345
LK G S+ V + + +Y KC ++NYA+ +
Sbjct: 179 LKYGFDSDVSVVNCFITMYMKCGSVNYAQKL----------------------------- 209
Query: 346 RHFDSLTEKNVVVWTALFSGYVKAQNCEALFDL-LSEFVTKEGVVTDALILVILLGACAL 404
FD + K ++ W A+ SGY AQN A L L + GV D + LV +L +CA
Sbjct: 210 --FDEMPVKGLISWNAMVSGY--AQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCAN 265
Query: 405 QAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVM 464
A G E+ I G + L + L++MY++CGN+T A+ +F ER LV + +
Sbjct: 266 LGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAI 325
Query: 465 IACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYK 524
I Y HGH E A+ LF+EM+ GI+PD FV +LSA H G + G +YF M +Y+
Sbjct: 326 IGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQ 385
Query: 525 ISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAE 584
+ P +HY+CM+DL GRA +L++A ++S+P + D + G+ L C++++N ELA A
Sbjct: 386 LEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAF 445
Query: 585 EKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIF 644
E+++ LE N YV L+N+Y+ N + RIR M+ K + GCS+V ++ +H F
Sbjct: 446 ERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYVELKGRVHPF 505
Query: 645 TVGDVSHPKTNAIYSVL 661
VGD +H +++ IY VL
Sbjct: 506 IVGDRNHLQSDEIYRVL 522
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 116/491 (23%), Positives = 203/491 (41%), Gaps = 101/491 (20%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H Q K G LI +Y K +L+ +RK+F+E N S
Sbjct: 72 HGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEE----NFHS-------------- 113
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
K V YN+++ GY+ + ++A+ LF +M +E + ++ T+ +
Sbjct: 114 -----------RKLTVCYNALVSGYV-SNSKCSEAVLLFRQMN--EEGVPVNSVTLLGLI 159
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
CV +N+ G LH +K D+ V+ I MY KC A ++F+
Sbjct: 160 PACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFD-------- 211
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
EM +K +SWN ++SGY QNG A L+L+ M
Sbjct: 212 ----------------EMPVKGL---------ISWNAMVSGYAQNGLATNVLELYRNMDM 246
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
NGV + T LS+C L E+ + +G SNPF+++ ++++Y +C
Sbjct: 247 NGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARC----- 301
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
GN+ +A+ FD + E+ +V WTA+ GY +
Sbjct: 302 --------------------------GNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHG 335
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR-MGVQMDKKLIS 431
E L E + + G+ D V +L AC+ G E + R ++ + S
Sbjct: 336 EIAVQLFKEMI-RSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYS 394
Query: 432 TLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+VD+ + G + A+ + ++ I+ D ++ ++ H + E A L FE ++E ++
Sbjct: 395 CMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIE--LE 452
Query: 491 PDAVTFVAILS 501
P+ + + +LS
Sbjct: 453 PENIGYYVLLS 463
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 151/335 (45%), Gaps = 35/335 (10%)
Query: 224 AVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHS 283
+ WNT + + + L L+ +M +G R N TF AL +C L + H
Sbjct: 14 STPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHG 73
Query: 284 WVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEE 343
+ K G + PFV +G++ +YCK L+ R F E
Sbjct: 74 QITKVGCVFEPFVQTGLISMYCKGS---------LVDNARKVF----------------E 108
Query: 344 ARRHFDSLTEKNVVVWTALFSGYVKAQNC-EALFDLLSEFVTKEGVVTDALILVILLGAC 402
H LT V + AL SGYV C EA+ LL + +EGV +++ L+ L+ AC
Sbjct: 109 ENFHSRKLT----VCYNALVSGYVSNSKCSEAV--LLFRQMNEEGVPVNSVTLLGLIPAC 162
Query: 403 ALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYN 462
L G +H L+ G D +++ + MY KCG++ YA+ +F + L+ +N
Sbjct: 163 VSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWN 222
Query: 463 VMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMG-EKYFNSMTA 521
M++ YA +G + L+ M G+ PD VT V +LS+ + G+ +G E F +
Sbjct: 223 AMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQAS 282
Query: 522 DYKISPETDHYACMIDLYGRANQLEKAIEFMKSIP 556
+ +P ++ +I++Y R L KA +P
Sbjct: 283 GFTSNPFLNN--ALINMYARCGNLTKAQAVFDGMP 315
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 147/387 (37%), Gaps = 84/387 (21%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTI 62
+NL+ H +K G N I +Y K + ++KLFDEMP + + SWN +
Sbjct: 165 PINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAM 224
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
+S GY G + L+L+ M H
Sbjct: 225 VS-------------------------------GYAQ-NGLATNVLELYRNMDMNGVH-- 250
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
D T+ L+ C L G ++ + + ++ F ++LI+MY++C +A V
Sbjct: 251 PDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAV 310
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
F+G E VSW +I GY +G E
Sbjct: 311 FDGMPERT---------------------------------LVSWTAIIGGYGMHGHGEI 337
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACC-------GLRNVKCAKEIHSWVLKNGLISNPF 295
++LF M +G+ + F LSAC GL K K ++ L+ G P
Sbjct: 338 AVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKR--NYQLEPG----PE 391
Query: 296 VSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGY-SLQGNMEEARRHFDSLTE- 353
S +VD+ + + A++++ ++ ++ ++G + N+E A F+ + E
Sbjct: 392 HYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIEL 451
Query: 354 --KNVVVWTALFSGYVKAQNCEALFDL 378
+N+ + L + Y A N + + +
Sbjct: 452 EPENIGYYVLLSNIYSNANNSKGVLRI 478
>gi|359479098|ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Vitis vinifera]
Length = 518
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 154/445 (34%), Positives = 251/445 (56%), Gaps = 4/445 (0%)
Query: 220 ELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACC--GLRNVKC 277
++ VSW + I+ + +NG E F RM GVR N TF + LSAC L ++
Sbjct: 50 PIDPIVSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEGLRF 109
Query: 278 AKEIHSWVLKNGL-ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYS 336
IH++V K GL N V + +VD+Y KC ++ A M VRNS S ++MI G
Sbjct: 110 GGSIHAYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNTMIDGCM 169
Query: 337 LQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILV 396
G + EA FD ++E++ + WT++ G+VK E + E + GV D + ++
Sbjct: 170 RNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFRE-MQLAGVEPDYVTII 228
Query: 397 ILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER 456
+L ACA AL G I+ ++++ + + K+ ++L+DMYS+CG + A +F+ +R
Sbjct: 229 SVLAACANLGALGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMPKR 288
Query: 457 DLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYF 516
LV +N MI +A +GH E+A+ F M ++G +PD V+F L+A H G V+ G ++F
Sbjct: 289 SLVSWNSMIVGFALNGHAEEALEFFNLMRKEGFRPDGVSFTGALTACSHSGLVDEGLQFF 348
Query: 517 NSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRN 576
+ M KISP +HY C++DLY RA +LE A+ + ++P + + V+LGS L CR + +
Sbjct: 349 DIMKRTRKISPRIEHYGCLVDLYSRAGRLEDALNVIANMPMKPNEVVLGSLLAACRTHGD 408
Query: 577 AELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVY 636
LA + L ++ + + YV L+N+YAA G W ++RK+M+ + ++ G S +
Sbjct: 409 VGLAERLMKYLCEVDPGSDSNYVLLSNIYAAVGRWDGASKVRKKMKALGIHKKPGFSSIE 468
Query: 637 VEHEIHIFTVGDVSHPKTNAIYSVL 661
++ IH F GD +H +T IY++L
Sbjct: 469 MDGSIHEFVAGDKTHVETQNIYAML 493
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 124/239 (51%), Gaps = 8/239 (3%)
Query: 13 HVQAIKAGL-TLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHD 71
H K GL T + L+ +YSK L + +FDEM RN SWNT+I C+++ +
Sbjct: 114 HAYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNTMIDGCMRNGE 173
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
+ +A LFD +D +++ SM+ G++ +E AL+ F EMQ A + D T+ S
Sbjct: 174 VGEAIVLFDQMSERDAISWTSMIGGFVKKGCFE-QALEWFREMQLAG--VEPDYVTIISV 230
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L C L +G G ++ F++K + +SLIDMYS+C C A +VFE + +
Sbjct: 231 LAACANLGALGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMPKR-S 289
Query: 192 LISKNAMVAACCREGEMEMALKTF---WRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
L+S N+M+ G E AL+ F ++ D VS+ ++ +G +EGL+ F
Sbjct: 290 LVSWNSMIVGFALNGHAEEALEFFNLMRKEGFRPDGVSFTGALTACSHSGLVDEGLQFF 348
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 4/153 (2%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N++I + ++ AR +F+ P + LV++NSM+ G+ G+ +AL+ F M+ E
Sbjct: 263 NSLIDMYSRCGCIRLARQVFEQMPKRSLVSWNSMIVGFA-LNGHAEEALEFFNLMRK--E 319
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFA-VSSLIDMYSKCRCYEE 178
R D + T L C V G Q M +T + L+D+YS+ E+
Sbjct: 320 GFRPDGVSFTGALTACSHSGLVDEGLQFFDIMKRTRKISPRIEHYGCLVDLYSRAGRLED 379
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMA 211
A V + N + +++AAC G++ +A
Sbjct: 380 ALNVIANMPMKPNEVVLGSLLAACRTHGDVGLA 412
>gi|297827241|ref|XP_002881503.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327342|gb|EFH57762.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 669
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 179/661 (27%), Positives = 310/661 (46%), Gaps = 74/661 (11%)
Query: 9 ALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIK 68
AL H + + + ++LI Y++ N ++ +FDE+ RN FS
Sbjct: 41 ALQLHARIVVFSIAPDNFLASKLISFYTRQNRFHQALHVFDEITVRNAFS---------- 90
Query: 69 SHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH----IRMD 124
YN++L Y + E Y DA LF+ + + R D
Sbjct: 91 ---------------------YNALLIAYTSREMY-FDAFSLFLSWIGSSCYSSGAARPD 128
Query: 125 EFTVT---STLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+++ L+ C RQ+H F+++ +D+ F + LI Y+KC E A +
Sbjct: 129 SISISCVLKALSGCDDFWLGSLARQVHGFVIRGGSDSDVFVGNGLITYYTKCDNIESARK 188
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
VF+ EM+ + D VSWN++ISGY Q+G E
Sbjct: 189 VFD------------------------EMSDR---------DVVSWNSMISGYSQSGSFE 215
Query: 242 EGLKLFVRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
+ KL+ M G + + NE T S L AC ++ E+H +++N + + + + +
Sbjct: 216 DCKKLYKAMLGCSDFKPNEVTVISVLQACGQSSDLVFGMEVHKKMIENHIQMDLSLCNAV 275
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
+ Y KC +++YA ++ ++S + ++I GY G ++EA F + + W
Sbjct: 276 IGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWN 335
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
A+ SG ++ + E + + E + + G + + L LL + + L GKEIHA+ +R
Sbjct: 336 AVISGLMQNNHHEEVINSFREMI-RCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIR 394
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
G + + ++++D Y+K G + A+ +F N +R L+++ +I YA HG + A L
Sbjct: 395 NGSDNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIVWTAIITAYAVHGDSDSACSL 454
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
F++M G KPD VT A+LSAF H G + + F+SM Y I P +HYACM+ +
Sbjct: 455 FDQMQCLGTKPDNVTLTAVLSAFAHSGDSDKAQHIFDSMLTKYNIEPGVEHYACMVSVLS 514
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQ 600
RA +L A+EF+ +P E A + G+ LN + + E+A A ++L +E N Y
Sbjct: 515 RAGKLSNAMEFISKMPIEPIAKVWGALLNGASVLGDVEIARFACDRLFEMEPENTGNYTI 574
Query: 601 LANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSV 660
+AN+Y G W E +R +M+ + + G SW+ + F D S ++ +Y +
Sbjct: 575 MANLYTQAGRWEEAEVVRDKMKRIGLKKIPGTSWIETNKGLRSFIAKDSSCERSKEMYDI 634
Query: 661 L 661
+
Sbjct: 635 I 635
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 124/252 (49%), Gaps = 7/252 (2%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
+S +L + H + I+ + + N +I Y+K L +R LFDEM E++ ++
Sbjct: 246 QSSDLVFGMEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGA 305
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
IIS + +K+A +LF L T+N+++ G + +E + + F EM
Sbjct: 306 IISGYMAHGLVKEAMALFSEMESIGLSTWNAVISGLMQNNHHE-EVINSFREMIRCGS-- 362
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
R + T++S L N+ G+++HAF ++ +D + + +S+ID Y+K A R
Sbjct: 363 RPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGSDNNIYVTTSIIDNYAKLGFLLGAQR 422
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN---DAVSWNTLISGYVQNG 238
VF+ C + +LI A++ A G+ + A F + L D V+ ++S + +G
Sbjct: 423 VFDNCKDR-SLIVWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDNVTLTAVLSAFAHSG 481
Query: 239 DAEEGLKLFVRM 250
D+++ +F M
Sbjct: 482 DSDKAQHIFDSM 493
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 156/513 (30%), Positives = 272/513 (53%), Gaps = 37/513 (7%)
Query: 147 LHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREG 206
+HA +++ + F V L+ SKC + A R+F+
Sbjct: 68 IHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQ---------------------- 105
Query: 207 EMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASAL 266
+ P + + LI G+V +G+ + ++L+ RM + + + + AS L
Sbjct: 106 --------YTHNP---NVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASIL 154
Query: 267 SACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSF 326
AC ++ +E+HS LK GL SN V I+++Y KC + A + + +
Sbjct: 155 KACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARR-VFEEMPEDVV 213
Query: 327 SISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKE 386
+ + MI YS QG +EEA F + K+ V WTA+ G+V+ + + + E
Sbjct: 214 ASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEEMNRALEAF-RGMQGE 272
Query: 387 GVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYA 446
V + +V +L AC+ AL G+ +H+Y+ + ++++ + + L++MYS+CG++ A
Sbjct: 273 NVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEA 332
Query: 447 EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHC 506
+ +F +RD++ YN MI+ + +G +AI LF M+ + ++P VTFV +L+A H
Sbjct: 333 QTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHG 392
Query: 507 GSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGS 566
G V+ G K F+SMT DY + P+ +HY CM+DL GR +LE+A + ++++ D ++LG+
Sbjct: 393 GLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGT 452
Query: 567 FLNVCRLNRNAELAGEAEEKLLRLEGN-NKARYVQLANVYAAEGNWAEMGRIRKQMRGMK 625
L+ C++++N EL GE K+L G + YV L++VYA+ G W E ++R +M+
Sbjct: 453 LLSACKMHKNLEL-GEQVAKVLEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAG 511
Query: 626 GNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
+ GCS + V +EIH F +GD+ HP+ IY
Sbjct: 512 MQKEPGCSSIEVNNEIHEFLLGDLRHPRKERIY 544
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 113/486 (23%), Positives = 224/486 (46%), Gaps = 26/486 (5%)
Query: 22 TLTTITTNQLIHIY--SKH--NLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARS 77
+L ++ Q+I + SKH +L +L ++ F ++ +C K H + A
Sbjct: 43 SLKSLDQKQIISLLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASR 102
Query: 78 LFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVK 137
+F + + ++ Y +++ G++++ Y DA++L+ M + I D + + S L C
Sbjct: 103 IFQYTHNPNVYLYTALIDGFVSSGNY-FDAIQLYSRM--LHDSILPDNYLMASILKACGS 159
Query: 138 LLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNA 197
L + GR++H+ +K ++ ++++Y KC +A RVFE E+V ++
Sbjct: 160 QLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDV--VASTV 217
Query: 198 MVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRW 257
M+++ +G +E A F R D V W +I G+V+N + L+ F M VR
Sbjct: 218 MISSYSDQGLVEEAGAVFSRV-RRKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRP 276
Query: 258 NEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESML 317
NE T LSAC L ++ + +HS++ K + N FV + ++++Y +C +++ A+++
Sbjct: 277 NEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVF 336
Query: 318 LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFD 377
R+ + ++MI G S+ G +A F + + + F G + A + L D
Sbjct: 337 DEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVD 396
Query: 378 L---LSEFVTKEGVVTDAL----ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
+ +T++ V + +V LLG +E + I M + D ++
Sbjct: 397 FGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRL------EEAYDLIRTMKMTPDHIML 450
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIER---DLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
TL+ N+ E + + +R D Y ++ YA G ++A + +M E
Sbjct: 451 GTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEA 510
Query: 488 GIKPDA 493
G++ +
Sbjct: 511 GMQKEP 516
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 133/268 (49%), Gaps = 41/268 (15%)
Query: 4 LNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
L L+E H +A+K GL+ + +++ +Y K L ++R++F+EMPE +V + +I
Sbjct: 161 LALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPE-DVVASTVMI 219
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
S+ +++A ++F KD V + +M+ G++ E AL+ F MQ E++R
Sbjct: 220 SSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEEMNR-ALEAFRGMQG--ENVRP 276
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
+EFT+ L+ C +L + GR +H++M K + + F ++LI+MYS+C +EA VF
Sbjct: 277 NEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVF 336
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELND--AVSWNTLISGYVQNGDAE 241
+ E+ D +++NT+ISG NG +
Sbjct: 337 D-----------------------------------EMKDRDVITYNTMISGLSMNGKSR 361
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSAC 269
+ ++LF M +R TF L+AC
Sbjct: 362 QAIELFRVMIGRRLRPTNVTFVGVLNAC 389
>gi|218194108|gb|EEC76535.1| hypothetical protein OsI_14327 [Oryza sativa Indica Group]
Length = 797
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 181/553 (32%), Positives = 294/553 (53%), Gaps = 6/553 (1%)
Query: 47 LFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYIN-AEGYEA 105
+F MPERN FSWNTII+ + + +L ARSL P KD V N++L Y+ EA
Sbjct: 94 IFRSMPERNTFSWNTIITGIVSTGNLDMARSLLIEMPVKDPVACNAVLHRYVRRGRADEA 153
Query: 106 DAL-KLFIEMQSADEHIRM-DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV 163
AL + + AD D F + + + C + FGRQ HA MV + +
Sbjct: 154 FALLRTVGQCSGADASSPWNDPFVLATIVGACADWMKYDFGRQAHARMVVSKIEQDLVLS 213
Query: 164 SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELND 223
+L++MY KC + A V G T+ V+ S +A++ G + A++ F R+ E +
Sbjct: 214 CALVNMYCKCGDLDSARYVLNGLTQ-VDEFSLSALIYGYASCGHLHEAIRLFDRKEEPSI 272
Query: 224 AVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHS 283
A+ WN+LISG + LF RM + V + T+AS L+ C V ++IH
Sbjct: 273 AM-WNSLISGCAFACCGNDAFALFARMMRSDVLPDSSTYASILNVCGFSVMVNPGQQIHG 331
Query: 284 WVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEE 343
LK G +++ V+S ++D Y KC A ++ ++SMI YS G +EE
Sbjct: 332 CGLKCGAVNDIIVASALIDFYSKCGLWEDACRAFRELRFHDTIVLNSMITVYSNCGQIEE 391
Query: 344 ARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACA 403
ARR FD +T K+V+ W ++ G + + L E + + G+ D + + L A +
Sbjct: 392 ARRIFDMITGKSVISWNSMVVGLSQNGHARDALGLFCE-MHRLGLRLDKVAIASALSASS 450
Query: 404 LQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNV 463
++ G++I + +G+Q D + S+L+D+Y KCG++ IF+ + D VL+N
Sbjct: 451 SICSISFGEQIFSLATVLGLQSDHVVASSLIDLYCKCGSLANGCRIFEEIDKPDEVLWNS 510
Query: 464 MIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADY 523
M+ +A +G+ +A+ L E M KGIKP TF+A+LSA H G V+ G +F+ M AD+
Sbjct: 511 MLIGHASNGYGHEALELLELMKTKGIKPSERTFIAVLSACCHSGLVKEGLTWFHRMQADF 570
Query: 524 KISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEA 583
+SP +HYAC+ DL RA +LE+++EF++++P E DAV + + C+ N + +
Sbjct: 571 SVSPSAEHYACVTDLLVRAGRLEESVEFIENMPFEADAVSWTTVIGGCKAQGNEAMMRKV 630
Query: 584 EEKLLRLEGNNKA 596
+KL+ +E ++ +
Sbjct: 631 AKKLMEMESSHPS 643
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 128/510 (25%), Positives = 221/510 (43%), Gaps = 83/510 (16%)
Query: 135 CVKLL---NVGFGRQLHAFMVKTSNDASGFAVS-SLIDMYSKCRCYEE--ACRVFEGCTE 188
C++LL + G+QLH ++K+ + S S SL+ MY++C + A R+F+
Sbjct: 10 CIQLLRSCSAVAGQQLHQLLLKSGHVPSSLPPSNSLLLMYARCSPLHQHDARRLFDEMPV 69
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISG--------------- 233
+ N S N+++ + + AL F PE N SWNT+I+G
Sbjct: 70 K-NCFSYNSVITSHLNSRDHHAALNIFRSMPERN-TFSWNTIITGIVSTGNLDMARSLLI 127
Query: 234 ----------------YVQNGDAEEGLKLFVRMGE-----NGVRWNEH-TFASALSACCG 271
YV+ G A+E L +G+ WN+ A+ + AC
Sbjct: 128 EMPVKDPVACNAVLHRYVRRGRADEAFALLRTVGQCSGADASSPWNDPFVLATIVGACAD 187
Query: 272 LRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSM 331
++ H+ ++ + + + +S +V++YCKC +++ A +L + FS+S++
Sbjct: 188 WMKYDFGRQAHARMVVSKIEQDLVLSCALVNMYCKCGDLDSARYVLNGLTQVDEFSLSAL 247
Query: 332 IVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTD 391
I GY+ G++ EA R FD E ++ +W +L SG A F L + + + V+ D
Sbjct: 248 IYGYASCGHLHEAIRLFDRKEEPSIAMWNSLISGCAFACCGNDAFALFARMM-RSDVLPD 306
Query: 392 ALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK------------ 439
+ +L C ++PG++IH L+ G D + S L+D YSK
Sbjct: 307 SSTYASILNVCGFSVMVNPGQQIHGCGLKCGAVNDIIVASALIDFYSKCGLWEDACRAFR 366
Query: 440 -------------------CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
CG + A IF + ++ +N M+ + +GH A+ L
Sbjct: 367 ELRFHDTIVLNSMITVYSNCGQIEEARRIFDMITGKSVISWNSMVVGLSQNGHARDALGL 426
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY--ACMIDL 538
F EM G++ D V + LSA S+ GE+ F+ T + ++DH + +IDL
Sbjct: 427 FCEMHRLGLRLDKVAIASALSASSSICSISFGEQIFSLATV---LGLQSDHVVASSLIDL 483
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFL 568
Y + L + I + D V+ S L
Sbjct: 484 YCKCGSLANGCRIFEEI-DKPDEVLWNSML 512
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 113/476 (23%), Positives = 202/476 (42%), Gaps = 39/476 (8%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + + + + + + L+++Y K L +R + + + + + FS + +I L
Sbjct: 198 HARMVVSKIEQDLVLSCALVNMYCKCGDLDSARYVLNGLTQVDEFSLSALIYGYASCGHL 257
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+A LFD + +NS++ G A DA LF M +D + D T S L
Sbjct: 258 HEAIRLFDRKEEPSIAMWNSLISGCAFA-CCGNDAFALFARMMRSD--VLPDSSTYASIL 314
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
N+C + V G+Q+H +K S+LID YSKC +E+ACR F +
Sbjct: 315 NVCGFSVMVNPGQQIHGCGLKCGAVNDIIVASALIDFYSKCGLWEDACRAFRELRFH-DT 373
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
I N+M+ G++E A + F +SWN+++ G QNG A + L LF M
Sbjct: 374 IVLNSMITVYSNCGQIEEARRIF-DMITGKSVISWNSMVVGLSQNGHARDALGLFCEMHR 432
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G+R ++ ASALSA + ++ ++I S GL S+ V+S ++D+YCKC
Sbjct: 433 LGLRLDKVAIASALSASSSICSISFGEQIFSLATVLGLQSDHVVASSLIDLYCKC----- 487
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G++ R F+ + + + V+W ++ G+
Sbjct: 488 --------------------------GSLANGCRIFEEIDKPDEVLWNSMLIGHASNGYG 521
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG-KEIHAYILRMGVQMDKKLIS 431
+LL E + +G+ + +L AC + G H V + +
Sbjct: 522 HEALELL-ELMKTKGIKPSERTFIAVLSACCHSGLVKEGLTWFHRMQADFSVSPSAEHYA 580
Query: 432 TLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
+ D+ + G + + +N E D V + +I G+E + ++++E
Sbjct: 581 CVTDLLVRAGRLEESVEFIENMPFEADAVSWTTVIGGCKAQGNEAMMRKVAKKLME 636
>gi|115456597|ref|NP_001051899.1| Os03g0849700 [Oryza sativa Japonica Group]
gi|113550370|dbj|BAF13813.1| Os03g0849700 [Oryza sativa Japonica Group]
Length = 724
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 181/553 (32%), Positives = 294/553 (53%), Gaps = 6/553 (1%)
Query: 47 LFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYIN-AEGYEA 105
+F MPERN FSWNTII+ + + +L ARSL P KD V N++L Y+ EA
Sbjct: 94 IFRSMPERNTFSWNTIITGIVSTGNLDMARSLLIEMPVKDPVACNAVLHRYVRRGRADEA 153
Query: 106 DAL-KLFIEMQSADEHIRM-DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV 163
AL + + AD D F + + + C + FGRQ HA MV + +
Sbjct: 154 FALLRTVGQCSGADASSPWNDPFVLATIVGACADWMKYDFGRQAHARMVVSKIEQDLVLS 213
Query: 164 SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELND 223
+L++MY KC + A V G T+ V+ S +A++ G + A++ F R+ E +
Sbjct: 214 CALVNMYCKCGDLDSARYVLNGLTQ-VDEFSLSALIYGYASCGHLHEAIRLFDRKEEPSI 272
Query: 224 AVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHS 283
A+ WN+LISG + LF RM + V + T+AS L+ C V ++IH
Sbjct: 273 AM-WNSLISGCAFACCGNDAFALFARMMRSDVLPDSSTYASILNVCGFSVMVNPGQQIHG 331
Query: 284 WVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEE 343
LK G +++ V+S ++D Y KC A ++ ++SMI YS G +EE
Sbjct: 332 CGLKCGAVNDIIVASALIDFYSKCGLWEDACRAFRELRFHDTIVLNSMITVYSNCGQIEE 391
Query: 344 ARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACA 403
ARR FD +T K+V+ W ++ G + + L E + + G+ D + + L A +
Sbjct: 392 ARRIFDMITGKSVISWNSMVVGLSQNGHARDALGLFCE-MHRLGLRLDKVAIASALSASS 450
Query: 404 LQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNV 463
++ G++I + +G+Q D + S+L+D+Y KCG++ IF+ + D VL+N
Sbjct: 451 SICSISFGEQIFSLATVLGLQSDHVVASSLIDLYCKCGSLANGCRIFEEIDKPDEVLWNS 510
Query: 464 MIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADY 523
M+ +A +G+ +A+ L E M KGIKP TF+A+LSA H G V+ G +F+ M AD+
Sbjct: 511 MLIGHASNGYGHEALELLELMKTKGIKPSERTFIAVLSACCHSGLVKEGLTWFHRMQADF 570
Query: 524 KISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEA 583
+SP +HYAC+ DL RA +LE+++EF++++P E DAV + + C+ N + +
Sbjct: 571 SVSPSAEHYACVTDLLVRAGRLEESVEFIENMPFEADAVSWTTVIGGCKAQGNEAMMRKV 630
Query: 584 EEKLLRLEGNNKA 596
+KL+ +E ++ +
Sbjct: 631 AKKLMEMESSHPS 643
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 128/510 (25%), Positives = 221/510 (43%), Gaps = 83/510 (16%)
Query: 135 CVKLL---NVGFGRQLHAFMVKTSNDASGFAVS-SLIDMYSKCRCYEE--ACRVFEGCTE 188
C++LL + G+QLH ++K+ + S S SL+ MY++C + A R+F+
Sbjct: 10 CIQLLRSCSAVAGQQLHQLLLKSGHVPSSLPPSNSLLLMYARCSPLHQHDARRLFDEMPV 69
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISG--------------- 233
+ N S N+++ + + AL F PE N SWNT+I+G
Sbjct: 70 K-NCFSYNSVITSHLNSRDHHAALNIFRSMPERN-TFSWNTIITGIVSTGNLDMARSLLI 127
Query: 234 ----------------YVQNGDAEEGLKLFVRMGE-----NGVRWNEH-TFASALSACCG 271
YV+ G A+E L +G+ WN+ A+ + AC
Sbjct: 128 EMPVKDPVACNAVLHRYVRRGRADEAFALLRTVGQCSGADASSPWNDPFVLATIVGACAD 187
Query: 272 LRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSM 331
++ H+ ++ + + + +S +V++YCKC +++ A +L + FS+S++
Sbjct: 188 WMKYDFGRQAHARMVVSKIEQDLVLSCALVNMYCKCGDLDSARYVLNGLTQVDEFSLSAL 247
Query: 332 IVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTD 391
I GY+ G++ EA R FD E ++ +W +L SG A F L + + + V+ D
Sbjct: 248 IYGYASCGHLHEAIRLFDRKEEPSIAMWNSLISGCAFACCGNDAFALFARMM-RSDVLPD 306
Query: 392 ALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK------------ 439
+ +L C ++PG++IH L+ G D + S L+D YSK
Sbjct: 307 SSTYASILNVCGFSVMVNPGQQIHGCGLKCGAVNDIIVASALIDFYSKCGLWEDACRAFR 366
Query: 440 -------------------CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
CG + A IF + ++ +N M+ + +GH A+ L
Sbjct: 367 ELRFHDTIVLNSMITVYSNCGQIEEARRIFDMITGKSVISWNSMVVGLSQNGHARDALGL 426
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY--ACMIDL 538
F EM G++ D V + LSA S+ GE+ F+ T + ++DH + +IDL
Sbjct: 427 FCEMHRLGLRLDKVAIASALSASSSICSISFGEQIFSLATV---LGLQSDHVVASSLIDL 483
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFL 568
Y + L + I + D V+ S L
Sbjct: 484 YCKCGSLANGCRIFEEI-DKPDEVLWNSML 512
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 113/476 (23%), Positives = 202/476 (42%), Gaps = 39/476 (8%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + + + + + + L+++Y K L +R + + + + + FS + +I L
Sbjct: 198 HARMVVSKIEQDLVLSCALVNMYCKCGDLDSARYVLNGLTQVDEFSLSALIYGYASCGHL 257
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+A LFD + +NS++ G A DA LF M +D + D T S L
Sbjct: 258 HEAIRLFDRKEEPSIAMWNSLISGCAFA-CCGNDAFALFARMMRSD--VLPDSSTYASIL 314
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
N+C + V G+Q+H +K S+LID YSKC +E+ACR F +
Sbjct: 315 NVCGFSVMVNPGQQIHGCGLKCGAVNDIIVASALIDFYSKCGLWEDACRAFRELRFH-DT 373
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
I N+M+ G++E A + F +SWN+++ G QNG A + L LF M
Sbjct: 374 IVLNSMITVYSNCGQIEEARRIF-DMITGKSVISWNSMVVGLSQNGHARDALGLFCEMHR 432
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G+R ++ ASALSA + ++ ++I S GL S+ V+S ++D+YCKC
Sbjct: 433 LGLRLDKVAIASALSASSSICSISFGEQIFSLATVLGLQSDHVVASSLIDLYCKC----- 487
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G++ R F+ + + + V+W ++ G+
Sbjct: 488 --------------------------GSLANGCRIFEEIDKPDEVLWNSMLIGHASNGYG 521
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG-KEIHAYILRMGVQMDKKLIS 431
+LL E + +G+ + +L AC + G H V + +
Sbjct: 522 HEALELL-ELMKTKGIKPSERTFIAVLSACCHSGLVKEGLTWFHRMQADFSVSPSAEHYA 580
Query: 432 TLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
+ D+ + G + + +N E D V + +I G+E + ++++E
Sbjct: 581 CVTDLLVRAGRLEESVEFIENMPFEADAVSWTTVIGGCKAQGNEAMMRKVAKKLME 636
>gi|222626171|gb|EEE60303.1| hypothetical protein OsJ_13371 [Oryza sativa Japonica Group]
Length = 797
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 181/553 (32%), Positives = 294/553 (53%), Gaps = 6/553 (1%)
Query: 47 LFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYIN-AEGYEA 105
+F MPERN FSWNTII+ + + +L ARSL P KD V N++L Y+ EA
Sbjct: 94 IFRSMPERNTFSWNTIITGIVSTGNLDMARSLLIEMPVKDPVACNAVLHRYVRRGRADEA 153
Query: 106 DAL-KLFIEMQSADEHIRM-DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV 163
AL + + AD D F + + + C + FGRQ HA MV + +
Sbjct: 154 FALLRTVGQCSGADASSPWNDPFVLATIVGACADWMKYDFGRQAHARMVVSKIEQDLVLS 213
Query: 164 SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELND 223
+L++MY KC + A V G T+ V+ S +A++ G + A++ F R+ E +
Sbjct: 214 CALVNMYCKCGDLDSARYVLNGLTQ-VDEFSLSALIYGYASCGHLHEAIRLFDRKEEPSI 272
Query: 224 AVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHS 283
A+ WN+LISG + LF RM + V + T+AS L+ C V ++IH
Sbjct: 273 AM-WNSLISGCAFACCGNDAFALFARMMRSDVLPDSSTYASILNVCGFSVMVNPGQQIHG 331
Query: 284 WVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEE 343
LK G +++ V+S ++D Y KC A ++ ++SMI YS G +EE
Sbjct: 332 CGLKCGAVNDIIVASALIDFYSKCGLWEDACRAFRELRFHDTIVLNSMITVYSNCGQIEE 391
Query: 344 ARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACA 403
ARR FD +T K+V+ W ++ G + + L E + + G+ D + + L A +
Sbjct: 392 ARRIFDMITGKSVISWNSMVVGLSQNGHARDALGLFCE-MHRLGLRLDKVAIASALSASS 450
Query: 404 LQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNV 463
++ G++I + +G+Q D + S+L+D+Y KCG++ IF+ + D VL+N
Sbjct: 451 SICSISFGEQIFSLATVLGLQSDHVVASSLIDLYCKCGSLANGCRIFEEIDKPDEVLWNS 510
Query: 464 MIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADY 523
M+ +A +G+ +A+ L E M KGIKP TF+A+LSA H G V+ G +F+ M AD+
Sbjct: 511 MLIGHASNGYGHEALELLELMKTKGIKPSERTFIAVLSACCHSGLVKEGLTWFHRMQADF 570
Query: 524 KISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEA 583
+SP +HYAC+ DL RA +LE+++EF++++P E DAV + + C+ N + +
Sbjct: 571 SVSPSAEHYACVTDLLVRAGRLEESVEFIENMPFEADAVSWTTVIGGCKAQGNEAMMRKV 630
Query: 584 EEKLLRLEGNNKA 596
+KL+ +E ++ +
Sbjct: 631 AKKLMEMESSHPS 643
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 128/510 (25%), Positives = 221/510 (43%), Gaps = 83/510 (16%)
Query: 135 CVKLL---NVGFGRQLHAFMVKTSNDASGFAVS-SLIDMYSKCRCYEE--ACRVFEGCTE 188
C++LL + G+QLH ++K+ + S S SL+ MY++C + A R+F+
Sbjct: 10 CIQLLRSCSAVAGQQLHQLLLKSGHVPSSLPPSNSLLLMYARCSPLHQHDARRLFDEMPV 69
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISG--------------- 233
+ N S N+++ + + AL F PE N SWNT+I+G
Sbjct: 70 K-NCFSYNSVITSHLNSRDHHAALNIFRSMPERN-TFSWNTIITGIVSTGNLDMARSLLI 127
Query: 234 ----------------YVQNGDAEEGLKLFVRMGE-----NGVRWNEH-TFASALSACCG 271
YV+ G A+E L +G+ WN+ A+ + AC
Sbjct: 128 EMPVKDPVACNAVLHRYVRRGRADEAFALLRTVGQCSGADASSPWNDPFVLATIVGACAD 187
Query: 272 LRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSM 331
++ H+ ++ + + + +S +V++YCKC +++ A +L + FS+S++
Sbjct: 188 WMKYDFGRQAHARMVVSKIEQDLVLSCALVNMYCKCGDLDSARYVLNGLTQVDEFSLSAL 247
Query: 332 IVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTD 391
I GY+ G++ EA R FD E ++ +W +L SG A F L + + + V+ D
Sbjct: 248 IYGYASCGHLHEAIRLFDRKEEPSIAMWNSLISGCAFACCGNDAFALFARMM-RSDVLPD 306
Query: 392 ALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK------------ 439
+ +L C ++PG++IH L+ G D + S L+D YSK
Sbjct: 307 SSTYASILNVCGFSVMVNPGQQIHGCGLKCGAVNDIIVASALIDFYSKCGLWEDACRAFR 366
Query: 440 -------------------CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
CG + A IF + ++ +N M+ + +GH A+ L
Sbjct: 367 ELRFHDTIVLNSMITVYSNCGQIEEARRIFDMITGKSVISWNSMVVGLSQNGHARDALGL 426
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY--ACMIDL 538
F EM G++ D V + LSA S+ GE+ F+ T + ++DH + +IDL
Sbjct: 427 FCEMHRLGLRLDKVAIASALSASSSICSISFGEQIFSLATV---LGLQSDHVVASSLIDL 483
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFL 568
Y + L + I + D V+ S L
Sbjct: 484 YCKCGSLANGCRIFEEI-DKPDEVLWNSML 512
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 113/476 (23%), Positives = 202/476 (42%), Gaps = 39/476 (8%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + + + + + + L+++Y K L +R + + + + + FS + +I L
Sbjct: 198 HARMVVSKIEQDLVLSCALVNMYCKCGDLDSARYVLNGLTQVDEFSLSALIYGYASCGHL 257
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+A LFD + +NS++ G A DA LF M +D + D T S L
Sbjct: 258 HEAIRLFDRKEEPSIAMWNSLISGCAFA-CCGNDAFALFARMMRSD--VLPDSSTYASIL 314
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
N+C + V G+Q+H +K S+LID YSKC +E+ACR F +
Sbjct: 315 NVCGFSVMVNPGQQIHGCGLKCGAVNDIIVASALIDFYSKCGLWEDACRAFRELRFH-DT 373
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
I N+M+ G++E A + F +SWN+++ G QNG A + L LF M
Sbjct: 374 IVLNSMITVYSNCGQIEEARRIF-DMITGKSVISWNSMVVGLSQNGHARDALGLFCEMHR 432
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G+R ++ ASALSA + ++ ++I S GL S+ V+S ++D+YCKC
Sbjct: 433 LGLRLDKVAIASALSASSSICSISFGEQIFSLATVLGLQSDHVVASSLIDLYCKC----- 487
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G++ R F+ + + + V+W ++ G+
Sbjct: 488 --------------------------GSLANGCRIFEEIDKPDEVLWNSMLIGHASNGYG 521
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG-KEIHAYILRMGVQMDKKLIS 431
+LL E + +G+ + +L AC + G H V + +
Sbjct: 522 HEALELL-ELMKTKGIKPSERTFIAVLSACCHSGLVKEGLTWFHRMQADFSVSPSAEHYA 580
Query: 432 TLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
+ D+ + G + + +N E D V + +I G+E + ++++E
Sbjct: 581 CVTDLLVRAGRLEESVEFIENMPFEADAVSWTTVIGGCKAQGNEAMMRKVAKKLME 636
>gi|413952592|gb|AFW85241.1| hypothetical protein ZEAMMB73_384525 [Zea mays]
Length = 683
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 179/666 (26%), Positives = 312/666 (46%), Gaps = 90/666 (13%)
Query: 44 SRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINA--E 101
+R+LFD +P R+V +WN++++A + D++ AR FD+ P +D++++N++L Y +
Sbjct: 55 ARRLFDALPARSVVTWNSLLAALSRGSDVRAARCFFDAMPVRDIISWNTLLSAYARSLQP 114
Query: 102 GYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGF 161
A A +LF EM D
Sbjct: 115 NDLAAARRLFYEMPQRD-----------------------------------------AV 133
Query: 162 AVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPEL 221
+ S+L+ Y++ EEA R+F+ N S N M+ G+M AL F P+
Sbjct: 134 SWSTLLGAYTRRGLMEEAQRLFDEMPHR-NASSWNTMITGFFAVGQMRKALNVFAAMPD- 191
Query: 222 NDAVSWNTLISGYVQNGDAEEGLKLFVRM--------------------GENGVRWNEHT 261
D+ S + ++SG+++NG E L + G+ G +
Sbjct: 192 KDSASLSAMVSGFIRNGRLHEADDLLTKRLTVMDMDKAVGAFNTLIAAYGQTGRVTDARR 251
Query: 262 FASALSACC----GLRNVKCAKEIHSW-----------------VLKNGLISNPFVS-SG 299
S + G + + + + SW L + + VS +
Sbjct: 252 LFSMIPKTQNQHKGHKRMVFERNVVSWNSMMMCYIRTGDVCSARALFDEMPHKDLVSWNT 311
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
++ Y + M AE + ++ + + MI G++ +G++E AR FD + E++ + W
Sbjct: 312 MIAGYTQASEMEEAEKLFWEVPDPDAVTWNLMIRGFTQKGDVEHARGFFDRMPERSTITW 371
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
+ SGY + ++ ++ L + + G D L +L ACA A L G ++H I
Sbjct: 372 NTMISGYEQNEDYDSTIKLFQRML-EVGERPDHHTLSSVLAACASLAMLRLGAQLHQLIE 430
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKAI 478
+ + D + L+ MYS+CG + A+ IF + +RD+V +N +I Y G+ +A+
Sbjct: 431 KSFLP-DTATNNALMTMYSRCGELISAKAIFGHMHTQRDIVSWNALIGGYEQQGNATEAL 489
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
LFEEM + P +TF+++LSA + G V G F++M DY ++ +HYA +++L
Sbjct: 490 RLFEEMRSAKVMPTHITFISLLSACGNAGLVSEGRVVFHTMVHDYGLAASVEHYAALVNL 549
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARY 598
GR QLE A+E +KS+P D + G+FL C +N LA A L +++ ++ A Y
Sbjct: 550 IGRHGQLEDALELIKSMPIAPDRAVWGAFLGACTAKKNEPLAEMAANALSKIDPDSSAPY 609
Query: 599 VQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
V + N++A EG W +R+ M + ++ G SW+ + ++H+F GD SHP T+ I+
Sbjct: 610 VLMHNLHAHEGRWGSASLVREDMERLGIHKHPGYSWIDLHDKVHVFISGDTSHPLTHEIF 669
Query: 659 SVLAIF 664
SVL F
Sbjct: 670 SVLECF 675
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 127/522 (24%), Positives = 220/522 (42%), Gaps = 75/522 (14%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
++ + L+ Y++ L+ E+++LFDEMP RN SWNT+I+ +++A ++F + P K
Sbjct: 133 VSWSTLLGAYTRRGLMEEAQRLFDEMPHRNASSWNTMITGFFAVGQMRKALNVFAAMPDK 192
Query: 86 DLVTYNSMLCGYI-NAEGYEADAL---KLFIEMQSADEHIRMDEFTVTSTLNLCV----K 137
D + ++M+ G+I N +EAD L +L + MD N + +
Sbjct: 193 DSASLSAMVSGFIRNGRLHEADDLLTKRLTV----------MDMDKAVGAFNTLIAAYGQ 242
Query: 138 LLNVGFGRQLHAFMVKTSNDASGFAV----SSLIDMYSKCRCYEEACRVFEGCTEEV--- 190
V R+L + + KT N G +++ S CY R + C+
Sbjct: 243 TGRVTDARRLFSMIPKTQNQHKGHKRMVFERNVVSWNSMMMCY---IRTGDVCSARALFD 299
Query: 191 -----NLISKNAMVAACCREGEMEMALKTFWRQPELN----------------------- 222
+L+S N M+A + EME A K FW P+ +
Sbjct: 300 EMPHKDLVSWNTMIAGYTQASEMEEAEKLFWEVPDPDAVTWNLMIRGFTQKGDVEHARGF 359
Query: 223 -------DAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNV 275
++WNT+ISGY QN D + +KLF RM E G R + HT +S L+AC L +
Sbjct: 360 FDRMPERSTITWNTMISGYEQNEDYDSTIKLFQRMLEVGERPDHHTLSSVLAACASLAML 419
Query: 276 KCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESML-LLKGVRNSFSISSMIVG 334
+ ++H +++ + + ++ ++ +Y +C + A+++ + R+ S +++I G
Sbjct: 420 RLGAQLHQ-LIEKSFLPDTATNNALMTMYSRCGELISAKAIFGHMHTQRDIVSWNALIGG 478
Query: 335 YSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFD----LLSEFVTKEGVVT 390
Y QGN EA R F+ + V+ F + A L + V G+
Sbjct: 479 YEQQGNATEALRLFEEMRSAKVMPTHITFISLLSACGNAGLVSEGRVVFHTMVHDYGLAA 538
Query: 391 DALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIF 450
L+ L E+ I M + D+ + + + N AE+
Sbjct: 539 SVEHYAALVNLIGRHGQLEDALEL---IKSMPIAPDRAVWGAFLGACTAKKNEPLAEMAA 595
Query: 451 QNFIERDL---VLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+ D Y +M +AH G A L+ E+M GI
Sbjct: 596 NALSKIDPDSSAPYVLMHNLHAHEGRWGSASLVREDMERLGI 637
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/432 (22%), Positives = 176/432 (40%), Gaps = 85/432 (19%)
Query: 165 SLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDA 224
SL+ + + R + A R+F+ ++++ N+++AA R ++ A + F+ + D
Sbjct: 42 SLVGLLRRGR-FSAARRLFDALPAR-SVVTWNSLLAALSRGSDVRAA-RCFFDAMPVRDI 98
Query: 225 VSWNTLISGY---VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEI 281
+SWNTL+S Y +Q D +LF M + ++
Sbjct: 99 ISWNTLLSAYARSLQPNDLAAARRLFYEMPQ--------------------------RDA 132
Query: 282 HSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNM 341
SW S ++ Y + M A+ + RN+ S ++MI G+ G M
Sbjct: 133 VSW-------------STLLGAYTRRGLMEEAQRLFDEMPHRNASSWNTMITGFFAVGQM 179
Query: 342 EEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVT----------------- 384
+A F ++ +K+ +A+ SG+++ DLL++ +T
Sbjct: 180 RKALNVFAAMPDKDSASLSAMVSGFIRNGRLHEADDLLTKRLTVMDMDKAVGAFNTLIAA 239
Query: 385 --KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGN 442
+ G VTDA L ++ Q H G + RM + + ++++ Y + G+
Sbjct: 240 YGQTGRVTDARRLFSMIPKTQNQ---HKGHK------RMVFERNVVSWNSMMMCYIRTGD 290
Query: 443 MTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
+ A +F +DLV +N MIA Y E+A LF E+ + PDAVT+ ++
Sbjct: 291 VCSARALFDEMPHKDLVSWNTMIAGYTQASEMEEAEKLFWEVPD----PDAVTWNLMIRG 346
Query: 503 FRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF---MKSIPTEE 559
F G VE +F+ M I+ + MI Y + + I+ M +
Sbjct: 347 FTQKGDVEHARGFFDRMPERSTIT-----WNTMISGYEQNEDYDSTIKLFQRMLEVGERP 401
Query: 560 DAVILGSFLNVC 571
D L S L C
Sbjct: 402 DHHTLSSVLAAC 413
>gi|28269400|gb|AAO37943.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 731
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 181/553 (32%), Positives = 294/553 (53%), Gaps = 6/553 (1%)
Query: 47 LFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYIN-AEGYEA 105
+F MPERN FSWNTII+ + + +L ARSL P KD V N++L Y+ EA
Sbjct: 28 IFRSMPERNTFSWNTIITGIVSTGNLDMARSLLIEMPVKDPVACNAVLHRYVRRGRADEA 87
Query: 106 DAL-KLFIEMQSADEHIRM-DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV 163
AL + + AD D F + + + C + FGRQ HA MV + +
Sbjct: 88 FALLRTVGQCSGADASSPWNDPFVLATIVGACADWMKYDFGRQAHARMVVSKIEQDLVLS 147
Query: 164 SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELND 223
+L++MY KC + A V G T+ V+ S +A++ G + A++ F R+ E +
Sbjct: 148 CALVNMYCKCGDLDSARYVLNGLTQ-VDEFSLSALIYGYASCGHLHEAIRLFDRKEEPSI 206
Query: 224 AVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHS 283
A+ WN+LISG + LF RM + V + T+AS L+ C V ++IH
Sbjct: 207 AM-WNSLISGCAFACCGNDAFALFARMMRSDVLPDSSTYASILNVCGFSVMVNPGQQIHG 265
Query: 284 WVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEE 343
LK G +++ V+S ++D Y KC A ++ ++SMI YS G +EE
Sbjct: 266 CGLKCGAVNDIIVASALIDFYSKCGLWEDACRAFRELRFHDTIVLNSMITVYSNCGQIEE 325
Query: 344 ARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACA 403
ARR FD +T K+V+ W ++ G + + L E + + G+ D + + L A +
Sbjct: 326 ARRIFDMITGKSVISWNSMVVGLSQNGHARDALGLFCE-MHRLGLRLDKVAIASALSASS 384
Query: 404 LQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNV 463
++ G++I + +G+Q D + S+L+D+Y KCG++ IF+ + D VL+N
Sbjct: 385 SICSISFGEQIFSLATVLGLQSDHVVASSLIDLYCKCGSLANGCRIFEEIDKPDEVLWNS 444
Query: 464 MIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADY 523
M+ +A +G+ +A+ L E M KGIKP TF+A+LSA H G V+ G +F+ M AD+
Sbjct: 445 MLIGHASNGYGHEALELLELMKTKGIKPSERTFIAVLSACCHSGLVKEGLTWFHRMQADF 504
Query: 524 KISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEA 583
+SP +HYAC+ DL RA +LE+++EF++++P E DAV + + C+ N + +
Sbjct: 505 SVSPSAEHYACVTDLLVRAGRLEESVEFIENMPFEADAVSWTTVIGGCKAQGNEAMMRKV 564
Query: 584 EEKLLRLEGNNKA 596
+KL+ +E ++ +
Sbjct: 565 AKKLMEMESSHPS 577
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 110/448 (24%), Positives = 188/448 (41%), Gaps = 76/448 (16%)
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISG----------------- 233
N S N+++ + + AL F PE N SWNT+I+G
Sbjct: 5 NCFSYNSVITSHLNSRDHHAALNIFRSMPERN-TFSWNTIITGIVSTGNLDMARSLLIEM 63
Query: 234 --------------YVQNGDAEEGLKLFVRMGE-----NGVRWNEH-TFASALSACCGLR 273
YV+ G A+E L +G+ WN+ A+ + AC
Sbjct: 64 PVKDPVACNAVLHRYVRRGRADEAFALLRTVGQCSGADASSPWNDPFVLATIVGACADWM 123
Query: 274 NVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIV 333
++ H+ ++ + + + +S +V++YCKC +++ A +L + FS+S++I
Sbjct: 124 KYDFGRQAHARMVVSKIEQDLVLSCALVNMYCKCGDLDSARYVLNGLTQVDEFSLSALIY 183
Query: 334 GYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDAL 393
GY+ G++ EA R FD E ++ +W +L SG A F L + + + V+ D+
Sbjct: 184 GYASCGHLHEAIRLFDRKEEPSIAMWNSLISGCAFACCGNDAFALFARMM-RSDVLPDSS 242
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK-------------- 439
+L C ++PG++IH L+ G D + S L+D YSK
Sbjct: 243 TYASILNVCGFSVMVNPGQQIHGCGLKCGAVNDIIVASALIDFYSKCGLWEDACRAFREL 302
Query: 440 -----------------CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
CG + A IF + ++ +N M+ + +GH A+ LF
Sbjct: 303 RFHDTIVLNSMITVYSNCGQIEEARRIFDMITGKSVISWNSMVVGLSQNGHARDALGLFC 362
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY--ACMIDLYG 540
EM G++ D V + LSA S+ GE+ F+ T + ++DH + +IDLY
Sbjct: 363 EMHRLGLRLDKVAIASALSASSSICSISFGEQIFSLATV---LGLQSDHVVASSLIDLYC 419
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFL 568
+ L + I + D V+ S L
Sbjct: 420 KCGSLANGCRIFEEI-DKPDEVLWNSML 446
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 113/476 (23%), Positives = 202/476 (42%), Gaps = 39/476 (8%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + + + + + + L+++Y K L +R + + + + + FS + +I L
Sbjct: 132 HARMVVSKIEQDLVLSCALVNMYCKCGDLDSARYVLNGLTQVDEFSLSALIYGYASCGHL 191
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+A LFD + +NS++ G A DA LF M +D + D T S L
Sbjct: 192 HEAIRLFDRKEEPSIAMWNSLISGCAFA-CCGNDAFALFARMMRSD--VLPDSSTYASIL 248
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
N+C + V G+Q+H +K S+LID YSKC +E+ACR F +
Sbjct: 249 NVCGFSVMVNPGQQIHGCGLKCGAVNDIIVASALIDFYSKCGLWEDACRAFRELRFH-DT 307
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
I N+M+ G++E A + F +SWN+++ G QNG A + L LF M
Sbjct: 308 IVLNSMITVYSNCGQIEEARRIF-DMITGKSVISWNSMVVGLSQNGHARDALGLFCEMHR 366
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G+R ++ ASALSA + ++ ++I S GL S+ V+S ++D+YCKC
Sbjct: 367 LGLRLDKVAIASALSASSSICSISFGEQIFSLATVLGLQSDHVVASSLIDLYCKC----- 421
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G++ R F+ + + + V+W ++ G+
Sbjct: 422 --------------------------GSLANGCRIFEEIDKPDEVLWNSMLIGHASNGYG 455
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG-KEIHAYILRMGVQMDKKLIS 431
+LL E + +G+ + +L AC + G H V + +
Sbjct: 456 HEALELL-ELMKTKGIKPSERTFIAVLSACCHSGLVKEGLTWFHRMQADFSVSPSAEHYA 514
Query: 432 TLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
+ D+ + G + + +N E D V + +I G+E + ++++E
Sbjct: 515 CVTDLLVRAGRLEESVEFIENMPFEADAVSWTTVIGGCKAQGNEAMMRKVAKKLME 570
>gi|115476154|ref|NP_001061673.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|27260973|dbj|BAC45090.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|40253357|dbj|BAD05289.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113623642|dbj|BAF23587.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|215715200|dbj|BAG94951.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 696
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 191/653 (29%), Positives = 311/653 (47%), Gaps = 102/653 (15%)
Query: 16 AIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQA 75
A+K+GL + L+ +Y+K +R++R++FD MPERN SWN +I+ +S D+
Sbjct: 119 ALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDM--- 175
Query: 76 RSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLC 135
A AL+LF+EM+ E + DE T S L
Sbjct: 176 -----------------------------ASALELFLEMER--EGLAPDEATFASLLT-A 203
Query: 136 VKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISK 195
V+ + QLH +VK + +++ I YS+C +++ R+F+G + +LIS
Sbjct: 204 VEGPSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISW 263
Query: 196 NAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR-MGENG 254
NAM+ A Y NG +E +K FVR M E+G
Sbjct: 264 NAMLGA--------------------------------YTHNGMDDEAMKFFVRMMQESG 291
Query: 255 VRWNEHTFASALSACCGL-RNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA 313
V + ++F S +S+C + + IH V+K+ L V + ++ +Y + Y
Sbjct: 292 VHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTR-----YN 346
Query: 314 ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE 373
E+ + ME+A + F+SL K+ V W ++ +GY +
Sbjct: 347 ENCM-----------------------MEDAYKCFNSLVLKDTVSWNSMLTGYSQ-HGLS 382
Query: 374 ALFDLLSEF--VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
A D L F + E V TD L + + A L GK+IH ++ G + + S
Sbjct: 383 A--DALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSS 440
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
+L+ MYSK G + A F+ + V +N MI YA HG E +LF EML++
Sbjct: 441 SLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPL 500
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
D +TFV ++++ H G V+ G + N+M Y + +HYAC +DLYGRA QL+KA +
Sbjct: 501 DHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKL 560
Query: 552 MKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNW 611
+ S+P E DA++ + L CR++ N ELA + L E + YV L+++Y+ G W
Sbjct: 561 IDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVAEPRQHSTYVLLSSMYSGLGMW 620
Query: 612 AEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIF 664
++ +++ M+ ++ G SW+ V++E+H F D SHPK + IY +L +
Sbjct: 621 SDRATVQRVMKKRGLSKVPGWSWIEVKNEVHSFNAEDKSHPKMDEIYEMLRVL 673
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/509 (22%), Positives = 208/509 (40%), Gaps = 107/509 (21%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNL--LRESRKLFDEMPERNVFSWNTIISACIKSH 70
H +K+G+ T NQL+ YS+ + L +R++FDE+P R+ SWN +++A
Sbjct: 14 HASLLKSGVAAPT-PWNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAA----- 67
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
QA A G +A +L M + + + + F + S
Sbjct: 68 ---QA------------------------ASGAHPEAWRLLRAMHA--QGLASNTFALGS 98
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L G QL + +K+ + FA S+L+D+Y+KC +A +VF+G E
Sbjct: 99 ALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPER- 157
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
N +S NA++A GY ++GD L+LF+ M
Sbjct: 158 NTVSWNALIA--------------------------------GYTESGDMASALELFLEM 185
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
G+ +E TFAS L+A G + ++H ++K G V + + Y +C
Sbjct: 186 EREGLAPDEATFASLLTAVEG-PSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQC--- 241
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE-KNVVVWTALFSGYVKA 369
G+++++RR FD + + ++++ W A+ Y
Sbjct: 242 ----------------------------GSLKDSRRIFDGIGDIRDLISWNAMLGAYTHN 273
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQA-ALHPGKEIHAYILRMGVQMDKK 428
+ + + GV D ++ +C+ H G+ IH +++ ++
Sbjct: 274 GMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTP 333
Query: 429 LISTLVDMYSKCGN---MTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
+ + L+ MY++ M A F + + +D V +N M+ Y+ HG A+ F M
Sbjct: 334 VCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMC 393
Query: 486 EKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
+ ++ D F A L + +++G++
Sbjct: 394 SENVRTDEYAFSAALRSSSELAVLQLGKQ 422
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 113/469 (24%), Positives = 204/469 (43%), Gaps = 99/469 (21%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPE-RNVFSWNTIISACIKSHD 71
H + +K G L N I YS+ L++SR++FD + + R++ SWN ++ A
Sbjct: 216 HGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGA------ 269
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
T+N G + +A+K F+ M + + D ++ TS
Sbjct: 270 ----------------YTHN----------GMDDEAMKFFVRMMQ-ESGVHPDMYSFTSI 302
Query: 132 LNLCVKLLNVGF-GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
++ C + + GR +H ++K++ + ++LI MY++ Y E C
Sbjct: 303 ISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTR---YNENCM--------- 350
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
ME A K F L D VSWN++++GY Q+G + + LK F M
Sbjct: 351 -----------------MEDAYKCF-NSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCM 392
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
VR +E+ F++AL + L ++ K+IH V+ +G SN FVS
Sbjct: 393 CSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVS------------- 439
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
SS+I YS G +++AR+ F+ + + V W A+ GY +
Sbjct: 440 ------------------SSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHG 481
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI-HAYILRMGVQMDKKL 429
E + L +E + ++ + D + V L+ +C+ + G EI + + GV + +
Sbjct: 482 QAENVDILFNEMLQRKAPL-DHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEH 540
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKA 477
+ VD+Y + G + A+ + + E D +++ ++ HG+ E A
Sbjct: 541 YACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELA 589
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 151/353 (42%), Gaps = 38/353 (10%)
Query: 196 NAMVAACCREGE--MEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGEN 253
N ++ A R + A + F P D VSWN L++ +G E +L M
Sbjct: 29 NQLLTAYSRSSPDGLAAARRVFDEVPR-RDEVSWNALLAAQAASGAHPEAWRLLRAMHAQ 87
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA 313
G+ N SAL + R ++ S LK+GL +N F +S ++DVY KC + A
Sbjct: 88 GLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDA 147
Query: 314 ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE 373
+ RN+ S +++I GY+ G+M A F + + + A F+ + A
Sbjct: 148 RQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVEGP 207
Query: 374 ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL 433
+ F + ++H I++ G + +++
Sbjct: 208 SCFLM---------------------------------HQLHGKIVKYGSALGLTVLNAA 234
Query: 434 VDMYSKCGNMTYAEIIFQNFIE-RDLVLYNVMIACYAHHGHEEKAILLFEEML-EKGIKP 491
+ YS+CG++ + IF + RDL+ +N M+ Y H+G +++A+ F M+ E G+ P
Sbjct: 235 ITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHP 294
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
D +F +I+S+ G + + + + + T +I +Y R N+
Sbjct: 295 DMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNE 347
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 187/655 (28%), Positives = 315/655 (48%), Gaps = 76/655 (11%)
Query: 23 LTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHD-----LKQARS 77
LT++ L+ ++ ++ ++L M ++ NT ++ + + + QA
Sbjct: 57 LTSLQCGALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEV 116
Query: 78 LFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVK 137
+FD K+ +N M+ GY + G +L L+ EM + R D FT L C
Sbjct: 117 IFDGIVLKNSFLWNFMIRGYA-SNGLPMKSLVLYREMLCFGQ--RADNFTYPFVLKACGD 173
Query: 138 LLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNA 197
LL V GR++H+ +V ++ + +SL+ MY+K
Sbjct: 174 LLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKF------------------------ 209
Query: 198 MVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRW 257
G+M A F R E D SWNT+ISGY +N D+ +F MG+ G+
Sbjct: 210 --------GDMGTARMVFDRMAE-RDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFA 260
Query: 258 NEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS-NPFVSSGIVDVYCKCENMNYAESM 316
+ T LSAC L+ VK K IH + ++N + + N F ++ ++++YC C M
Sbjct: 261 DCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCM------ 314
Query: 317 LLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALF 376
+ARR F+ + K+ V W ++ GY A+N +A
Sbjct: 315 -------------------------VDARRLFERVRWKDTVSWNSMILGY--ARNGDAFE 347
Query: 377 DL-LSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVD 435
L L + +G D + + +LGAC AAL G IH+Y+++ G + + + LVD
Sbjct: 348 SLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVD 407
Query: 436 MYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVT 495
MYSKCG++ + +F ++ LV ++ M+A Y HG +AI + + M + PD
Sbjct: 408 MYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGV 467
Query: 496 FVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSI 555
F +ILSA H G V G++ F M +Y + P HY+CM+DL GRA L++A ++++
Sbjct: 468 FTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTM 527
Query: 556 PTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMG 615
+ + I + L RL++N +LA + +K+ + + Y+ L+N+YAAE W ++
Sbjct: 528 EIKPTSDIWAALLTASRLHKNIKLAEISAQKVFDMNPKVVSSYICLSNIYAAEKRWDDVE 587
Query: 616 RIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYE 670
R+R +R + GCS++ +++ +H F VGD SH +T IY+ L +L E
Sbjct: 588 RVRAMVRRKGLKKSPGCSFIELDNMVHRFLVGDKSHQQTEDIYAKLNELKQQLKE 642
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 131/530 (24%), Positives = 224/530 (42%), Gaps = 139/530 (26%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + + GL N L+ +Y+K + +R +FD M ER++ SWNT+IS K+ D
Sbjct: 184 HSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADS 243
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
A +FD + G AD T+ L
Sbjct: 244 GTAFLVFD----------------LMGKAGLFADCT------------------TLLGLL 269
Query: 133 NLCVKLLNVGFGRQLHAFMVKTS-NDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
+ C L V G+ +H + V+ S + + F +SLI+MY C C +A R+FE
Sbjct: 270 SACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFE------- 322
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
+ W+ D VSWN++I GY +NGDA E L+LF RM
Sbjct: 323 ---------------------RVRWK-----DTVSWNSMILGYARNGDAFESLRLFRRMA 356
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
+G ++ TF + L AC + ++ IHS+++K G +N V + +VD+Y KC
Sbjct: 357 LDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKC---- 412
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY-VKAQ 370
G++ +RR FD + +K++V W+A+ +GY + +
Sbjct: 413 ---------------------------GSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGR 445
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
EA+ L + + V+ D + +L AC+ + GKEI +M+K+
Sbjct: 446 GREAISIL--DGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIF-------YKMEKE-- 494
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
Y+ ++ L Y+ M+ GH ++A ++ M IK
Sbjct: 495 ------YN---------------VKPALSHYSCMVDLLGRAGHLDEAYVIIRTM---EIK 530
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE-TDHYACMIDLY 539
P + + A+L+A R ++++ E S + ++P+ Y C+ ++Y
Sbjct: 531 PTSDIWAALLTASRLHKNIKLAEI---SAQKVFDMNPKVVSSYICLSNIY 577
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L+ + H +K G TI L+ +YSK L SR++FDEMP++++ SW+ +++
Sbjct: 380 LRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAG 439
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINA---EGYEADALKLFIEMQ 115
++A S+ D ++ N + ++A G + ++F +M+
Sbjct: 440 YGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKME 492
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 154/448 (34%), Positives = 238/448 (53%), Gaps = 1/448 (0%)
Query: 223 DAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIH 282
D WN +I G+ + + E L L+ RM + N +TF S L AC L + +IH
Sbjct: 79 DTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIH 138
Query: 283 SWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNME 342
+ + K G ++ + + +++ Y N A + + S +S+I GY G M+
Sbjct: 139 AQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMD 198
Query: 343 EARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGAC 402
A F + EKN + WT + SGYV+A + L E + V D + L L AC
Sbjct: 199 IALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSD-VEPDNVSLANALSAC 257
Query: 403 ALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYN 462
A AL GK IH+Y+ + ++MD L L+DMY+KCG M A +F+N ++ + +
Sbjct: 258 AQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWT 317
Query: 463 VMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTAD 522
+I+ YA+HGH +AI F EM + GIKP+ +TF A+L+A + G VE G+ F SM D
Sbjct: 318 ALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERD 377
Query: 523 YKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGE 582
Y + P +HY C++DL GRA L++A F++ +P + +AVI G+ L CR+++N EL E
Sbjct: 378 YNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEE 437
Query: 583 AEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIH 642
E L+ ++ + RYV AN++A + W + R+ M+ + GCS + +E H
Sbjct: 438 IGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTH 497
Query: 643 IFTVGDVSHPKTNAIYSVLAIFTGELYE 670
F GD SHP+ I S I +L E
Sbjct: 498 EFLAGDRSHPEIEKIQSKWRIMRRKLEE 525
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 124/264 (46%), Gaps = 36/264 (13%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
+E H Q K G N LI+ Y+ + + LFD +PE + SWN++I
Sbjct: 131 FEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKG 190
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
+K+ + A +LF K+ +++ +M+ GY+ A+ +AL+LF EMQ++D + D
Sbjct: 191 YVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQAD-MNKEALQLFHEMQNSD--VEPDN 247
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
++ + L+ C +L + G+ +H+++ KT LIDMY+KC
Sbjct: 248 VSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKC------------ 295
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
GEME AL+ F + + +W LISGY +G E +
Sbjct: 296 --------------------GEMEEALEVF-KNIKKKSVQAWTALISGYAYHGHGREAIS 334
Query: 246 LFVRMGENGVRWNEHTFASALSAC 269
F+ M + G++ N TF + L+AC
Sbjct: 335 KFMEMQKMGIKPNVITFTAVLTAC 358
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 129/308 (41%), Gaps = 61/308 (19%)
Query: 279 KEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQ 338
K+IH+ +LK GL+ + +YA + L SF ISS +
Sbjct: 31 KQIHARMLKTGLMQD-----------------SYAITKFL------SFCISSTSSDF--- 64
Query: 339 GNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVIL 398
+ A+ FD + +W + G+ + E LL + + +A L
Sbjct: 65 --LPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSL-LLYQRMLCSSAPHNAYTFPSL 121
Query: 399 LGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDL 458
L AC+ +A +IHA I ++G + D +++L++ Y+ GN A ++F E D
Sbjct: 122 LKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDD 181
Query: 459 VLYNVMIACYAHHGHEEKAILLFEEMLEKG------------------------------ 488
V +N +I Y G + A+ LF +M EK
Sbjct: 182 VSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNS 241
Query: 489 -IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEK 547
++PD V+ LSA G++E G K+ +S +I ++ +ID+Y + ++E+
Sbjct: 242 DVEPDNVSLANALSACAQLGALEQG-KWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEE 300
Query: 548 AIEFMKSI 555
A+E K+I
Sbjct: 301 ALEVFKNI 308
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 11/167 (6%)
Query: 399 LGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDM---YSKCGNMTYAEIIFQNFIE 455
L C+ Q L K+IHA +L+ G+ D I+ + + + YA+I+F F
Sbjct: 21 LQRCSKQEEL---KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDR 77
Query: 456 RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKY 515
D L+N+MI ++ E+++LL++ ML +A TF ++L A + + E +
Sbjct: 78 PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQI 137
Query: 516 FNSMTADYKISPETDHYAC--MIDLYGRANQLEKAIEFMKSIPTEED 560
+T K+ E D YA +I+ Y + A IP +D
Sbjct: 138 HAQIT---KLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDD 181
>gi|218201765|gb|EEC84192.1| hypothetical protein OsI_30581 [Oryza sativa Indica Group]
Length = 715
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 177/621 (28%), Positives = 304/621 (48%), Gaps = 42/621 (6%)
Query: 75 ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNL 134
AR +FD + +++N+ + + G DAL M + + DE T S L
Sbjct: 65 ARGVFDGMRRRAALSWNATVAAHAR-RGRVRDALGTAARMHRSAAGL--DEATYASALGA 121
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
C + + G Q+H +VK+ +D +SL+D YS C + A +F+ L+
Sbjct: 122 CARGRCLRMGWQVHCQVVKSGSDDFPVVGASLLDFYSSCLDLDAARTLFDTLHANNELL- 180
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE--EGLKLFVRM-G 251
+ MV A R + AL R P D +W +ISGY + + + L+LFV++
Sbjct: 181 WSPMVVALVRFNLLSDALDLLQRMPPSRDLFAWTAIISGYARGANEYCCKSLELFVQLLA 240
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
E+GV NE T+ S L AC + ++ + IH ++++G S ++S +VD+YC+ ++
Sbjct: 241 EDGVMPNEFTYDSVLRACVKMGALEFGRSIHGCLIQSGFESEQLITSALVDLYCRSGAVD 300
Query: 312 YA-------------ESMLLLKGV------------------RNSFSISSMIVGYSLQGN 340
A S L+ G +S S + MI Y+ +G
Sbjct: 301 DAVMVYNGLQMPSLITSNTLIAGFISMGRTEDAKLVFSQMTEHDSGSYNLMIKAYADEGR 360
Query: 341 MEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLG 400
+E+ RR F+ + +N+V ++ S ++ E L + K T A LL
Sbjct: 361 LEDCRRMFEMMPRRNMVTLNSMMSVLLQNGKLEEGRKLFEQIRMKG---TRASTFPALLH 417
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL 460
ACA + GK +HA + + + + + + LVDMYSKCG ++ A F + ++
Sbjct: 418 ACATIGTIEQGKMVHALLCKTPFESNGYVGTALVDMYSKCGCVSDARAAFSCIMSPNVAS 477
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
+ +I A +GH +AI+ F ML+ +KP+ +TF+ IL A G V G ++F+SM
Sbjct: 478 WTSLINGLAQNGHWMEAIVQFARMLKNNVKPNEITFLGILMASARAGLVNKGMRFFHSME 537
Query: 521 ADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELA 580
+ Y + P +HY C +DL GRA ++ +A +F+ +P D V+ G+ L C + E+
Sbjct: 538 S-YGVVPTVEHYTCAVDLLGRARRVREAEKFISKMPIPADGVVWGALLTACWYTMDLEMG 596
Query: 581 GEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHE 640
+ EKL + + + YV ++N+YA G W ++ ++R ++R + + GCSW+ V+
Sbjct: 597 EKVAEKLFYMGTKHISAYVAMSNIYAKLGKWEDVVKVRTRLRSINAKKEPGCSWIEVKDM 656
Query: 641 IHIFTVGDVSHPKTNAIYSVL 661
+H+F V D +HP+ IY +L
Sbjct: 657 VHVFLVEDRNHPEREEIYLML 677
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 124/497 (24%), Positives = 216/497 (43%), Gaps = 72/497 (14%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H Q +K+G + L+ YS L +R LFD + N W+ ++ A ++ + L
Sbjct: 135 HCQVVKSGSDDFPVVGASLLDFYSSCLDLDAARTLFDTLHANNELLWSPMVVALVRFNLL 194
Query: 73 KQARSLFDS-SPHKDLVTYNSMLCGYI-NAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
A L P +DL + +++ GY A Y +L+LF+++ A++ + +EFT S
Sbjct: 195 SDALDLLQRMPPSRDLFAWTAIISGYARGANEYCCKSLELFVQLL-AEDGVMPNEFTYDS 253
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC---- 186
L CVK+ + FGR +H ++++ ++ S+L+D+Y + ++A V+ G
Sbjct: 254 VLRACVKMGALEFGRSIHGCLIQSGFESEQLITSALVDLYCRSGAVDDAVMVYNGLQMPS 313
Query: 187 ----------------TEEVNLI----------SKNAMVAACCREGEMEMALKTFWRQPE 220
TE+ L+ S N M+ A EG +E + F P
Sbjct: 314 LITSNTLIAGFISMGRTEDAKLVFSQMTEHDSGSYNLMIKAYADEGRLEDCRRMFEMMPR 373
Query: 221 LNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKE 280
N V+ N+++S +QNG EEG KLF ++ G R TF + L AC + ++ K
Sbjct: 374 RN-MVTLNSMMSVLLQNGKLEEGRKLFEQIRMKGTR--ASTFPALLHACATIGTIEQGKM 430
Query: 281 IHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGN 340
+H+ + K SN +V + +VD+Y KC ++ A + N S +S+I G + G+
Sbjct: 431 VHALLCKTPFESNGYVGTALVDMYSKCGCVSDARAAFSCIMSPNVASWTSLINGLAQNGH 490
Query: 341 MEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEAL------------------------- 375
EA F + + NV F G + A L
Sbjct: 491 WMEAIVQFARMLKNNVKPNEITFLGILMASARAGLVNKGMRFFHSMESYGVVPTVEHYTC 550
Query: 376 -FDLLS---------EFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
DLL +F++K + D ++ LL AC L G+++ + MG +
Sbjct: 551 AVDLLGRARRVREAEKFISKMPIPADGVVWGALLTACWYTMDLEMGEKVAEKLFYMGTKH 610
Query: 426 DKKLISTLVDMYSKCGN 442
++ + ++Y+K G
Sbjct: 611 ISAYVA-MSNIYAKLGK 626
>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Vitis vinifera]
Length = 703
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 177/634 (27%), Positives = 309/634 (48%), Gaps = 73/634 (11%)
Query: 49 DEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADAL 108
++ + N+ N++I+ K + AR LFD +++V++ +++ GY + G + L
Sbjct: 55 NQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRKRNVVSWGALMAGYFH-NGLVLEVL 113
Query: 109 KLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLID 168
+LF M S D ++R +E+ + ++ C V G Q H + +K SG +
Sbjct: 114 RLFKTMISVD-YMRPNEYIFATIISSCSDSGQVVEGWQCHGYALK-----SGLVFHQYV- 166
Query: 169 MYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWN 228
KNA++ R +++ A+ ++ P L D S+N
Sbjct: 167 --------------------------KNALICMYSRRSDVKGAMSVWYEVPGL-DVFSYN 199
Query: 229 TLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKN 288
+I+G ++NG E L++ RM + + W+ T+ +A C L++++ ++H + +
Sbjct: 200 IIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRT 259
Query: 289 GLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHF 348
G + FVSS I+D+Y KC GN+ AR+ F
Sbjct: 260 GAEYDSFVSSAIIDMYGKC-------------------------------GNILNARKVF 288
Query: 349 DSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAAL 408
+ L KNVV WTA+ + Y + E + E +G++ + +LL +CA +AL
Sbjct: 289 NRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEV-DGLLPNEYTFAVLLNSCAGISAL 347
Query: 409 HPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACY 468
GK +H I + G + + + L++MYSK G++ A +F I RD + ++ MI
Sbjct: 348 GHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGL 407
Query: 469 AHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE 528
+HHG +A+++F+EML P VTFV +LSA H GSV+ G Y N + I P
Sbjct: 408 SHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPG 467
Query: 529 TDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLL 588
+HY C++ L +A +L++A FMKS P + D V + L+ C +++N L + E +L
Sbjct: 468 VEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNYGLGKKVAELVL 527
Query: 589 RLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGD 648
+++ + Y+ L+N+YA W + +IRK MR + G SW+ + + IH+F
Sbjct: 528 QMDPGDVGTYILLSNMYAKAKRWDGVVKIRKLMRERNVKKEPGASWIEIRNSIHVFVSEG 587
Query: 649 VSHPKTNAIY-SVLAIFT-----GELYEIAGAFY 676
+HP++N IY V + T G + +IA F+
Sbjct: 588 KTHPESNQIYEKVQELLTMIRPMGYVPDIAAVFH 621
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 114/469 (24%), Positives = 199/469 (42%), Gaps = 102/469 (21%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACI 67
E CH A+K+GL N LI +YS+ + ++ + ++ E+P +VFS+N II+ +
Sbjct: 147 EGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLL 206
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFT 127
++ GY ++AL++ M DE I D T
Sbjct: 207 EN--------------------------------GYPSEALEVLDRM--VDECIVWDNVT 232
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
+ LC L ++ G Q+H M +T + F S++IDMY KC A +VF
Sbjct: 233 YVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQ 292
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
+ N++S A++AA Y QNG EE L F
Sbjct: 293 TK-NVVSWTAILAA--------------------------------YSQNGCFEEALNFF 319
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
M +G+ NE+TFA L++C G+ + K +H+ + K+G + V + ++++Y K
Sbjct: 320 PEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKS 379
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
++ A + L R+S + S+MI G S G EA +F +
Sbjct: 380 GSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREA---------------LVVFQEML 424
Query: 368 KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG-KEIHAYILRMGVQMD 426
A+ C +VT GV L ACA ++ G ++ + + G++
Sbjct: 425 AAKEC-------PHYVTFVGV----------LSACAHLGSVQEGFYYLNQLMKQTGIEPG 467
Query: 427 KKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMI-ACYAHHGH 473
+ + +V + K G + AE ++ ++ D+V + ++ AC+ H +
Sbjct: 468 VEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNY 516
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 123/319 (38%), Gaps = 78/319 (24%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L+ L H + + G + ++ +I +Y K + +RK+F+ + +NV SW I++
Sbjct: 245 DLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILA 304
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
A + G +AL F EM+ + + +
Sbjct: 305 A--------------------------------YSQNGCFEEALNFFPEMEV--DGLLPN 330
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
E+T LN C + +G G+ LH + K+ + ++LI+MYSK E A +VF
Sbjct: 331 EYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVF- 389
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
+ CR D+++W+ +I G +G E L
Sbjct: 390 --------------LEMICR------------------DSITWSAMICGLSHHGLGREAL 417
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG----- 299
+F M + TF LSAC L +V+ + N L+ + G
Sbjct: 418 VVFQEMLAAKECPHYVTFVGVLSACAHLGSVQ-----EGFYYLNQLMKQTGIEPGVEHYT 472
Query: 300 -IVDVYCKCENMNYAESML 317
IV + CK ++ AE+ +
Sbjct: 473 CIVGLLCKAGRLDEAENFM 491
>gi|225460143|ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Vitis vinifera]
Length = 748
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 189/665 (28%), Positives = 308/665 (46%), Gaps = 71/665 (10%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L E H I G I +L+ YS NLL ++ + + + F WN +IS
Sbjct: 115 SLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNILHPFPWNLLIS 174
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
+ +++ G+ AL + +M + IR D
Sbjct: 175 SYVRN--------------------------------GFCQKALSAYKQM--VKKGIRPD 200
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
FT S L C + L++GFG+++H + + S ++LI MY KC A +F+
Sbjct: 201 NFTYPSVLKACGEELDLGFGKEVHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFD 260
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTF---WRQPELNDAVSWNTLISGYVQNGDAE 241
E + +S N+M++ G A + F W + + + WNT+ GY++ G+ +
Sbjct: 261 KIPER-DAVSWNSMISVYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYK 319
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
L+L +M + G + L AC + + K KEIHS+ +++ V + ++
Sbjct: 320 GALELLSQMRKCGSHLDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNALI 379
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
+Y +C+++ +A Y L F + K+++ W +
Sbjct: 380 TMYSRCKDLKHA---------------------YLL----------FQLMEAKSLITWNS 408
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+ SG E LL E + G+ + + + +L CA A L GKE H Y+ R
Sbjct: 409 IISGCCHMDRSEEASFLLREMLLF-GIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRR 467
Query: 422 GVQMDKKLI-STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
D L+ + LVDMY++ G + A +F ERD + Y MIA Y G + A+ L
Sbjct: 468 EDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKL 527
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
FEEM IKPD +T +A+LSA H G V G+ F M + Y ++P +H+ACM DL+G
Sbjct: 528 FEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFG 587
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQ 600
RA L KA E ++++P + + + + CR++RN E+ A EKLL ++ N YV
Sbjct: 588 RAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPENPGYYVL 647
Query: 601 LANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSV 660
+AN+YAA G W ++ ++R MR + + GC+WV V F V D S+ + IY +
Sbjct: 648 IANMYAAAGCWNKLAKVRIFMRDLGVRKAPGCAWVDVGTGFSPFLVDDTSNANADEIYPL 707
Query: 661 LAIFT 665
L T
Sbjct: 708 LEGLT 712
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 87/399 (21%), Positives = 163/399 (40%), Gaps = 116/399 (29%)
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG----------IVDVYCKCEN 309
H +S LS+C ++++ +++H ++ G +P + +VD + EN
Sbjct: 101 HPISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITEN 160
Query: 310 MN----YAESMLLLKGVRNSF--------------------------------------- 326
N + ++L+ VRN F
Sbjct: 161 SNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFG 220
Query: 327 -----SISSMIVGYSLQ------------GNMEEARRHFDSLTEKNVVVWTALFS----- 364
SI++ + +SL G + AR FD + E++ V W ++ S
Sbjct: 221 KEVHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASM 280
Query: 365 ------------------------------GYVKAQNCEALFDLLSEFVTKEGVVTDALI 394
GY++ N + +LLS+ + K G D++
Sbjct: 281 GMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQ-MRKCGSHLDSVA 339
Query: 395 LVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFI 454
L+I LGAC+ GKEIH++ +R + + L+ MYS+C ++ +A ++FQ
Sbjct: 340 LIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNALITMYSRCKDLKHAYLLFQLME 399
Query: 455 ERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
+ L+ +N +I+ H E+A L EML GI+P+ VT ++L +++ G++
Sbjct: 400 AKSLITWNSIISGCCHMDRSEEASFLLREMLLFGIEPNYVTIASVLPLCARVANLQHGKE 459
Query: 515 YFNSMT--ADYKISPETDH---YACMIDLYGRANQLEKA 548
+ MT D+K DH + ++D+Y R+ ++ +A
Sbjct: 460 FHCYMTRREDFK-----DHLLLWNALVDMYARSGKVLEA 493
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 111/232 (47%), Gaps = 15/232 (6%)
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD 457
LL +C +L G+++H +I+ +G + L+ LV YS + A +I +N
Sbjct: 106 LLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNILH 165
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCG---SVEMGEK 514
+N++I+ Y +G +KA+ +++M++KGI+PD T+ ++L A CG + G++
Sbjct: 166 PFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKA---CGEELDLGFGKE 222
Query: 515 YFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNV---- 570
S+ A +I + +I +YG+ ++ A + IP E DAV S ++V
Sbjct: 223 VHESINAS-RIKWSLIVHNALISMYGKCGKVGIARDLFDKIP-ERDAVSWNSMISVYASM 280
Query: 571 CRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMR 622
N EL G + + L N + +A Y GN+ + QMR
Sbjct: 281 GMWNEAFELFGSMWAEDIEL---NIIIWNTIAGGYLRTGNYKGALELLSQMR 329
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 174/540 (32%), Positives = 268/540 (49%), Gaps = 69/540 (12%)
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
I+ D + + LN CV V G+++HA M+KT + + LI +Y+KC C A
Sbjct: 8 IKFDGYNML--LNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCAR 65
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
VF+ E + VSW +ISGY Q G A
Sbjct: 66 HVFDEMRER---------------------------------NVVSWTAMISGYSQRGFA 92
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
E L LFV+M + NE TFA+ LS+C G + ++IHS + K ++ FV S +
Sbjct: 93 SEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNYENHIFVGSSL 152
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
+D+Y K G + EAR F+ L E++VV T
Sbjct: 153 LDMYAKA-------------------------------GRIHEARGVFECLPERDVVSCT 181
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
A+ SGY + E +L + +EG+ ++ + LL A + AAL GK++H+++LR
Sbjct: 182 AIISGYAQLGLDEEALELFCR-LQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLR 240
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
+ L ++L+DMYSKCGN+ YA IF N R ++ +N M+ Y+ HG + + L
Sbjct: 241 CELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKL 300
Query: 481 FEEMLEKG-IKPDAVTFVAILSAFRHCGSVEMGEKYFNSM-TADYKISPETDHYACMIDL 538
F+ M E+ +KPD+VTF+A+LS H G + G + F+ M +I +HY C+IDL
Sbjct: 301 FKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDL 360
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARY 598
GRA ++E+A E +K +P E A I GS L CR++ N + +LL +E N Y
Sbjct: 361 LGRAGRVEEAFELIKKMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNY 420
Query: 599 VQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
V L+N+YA+ G W ++ +R+ M + G SW+ ++ IH F D SHP+ ++
Sbjct: 421 VILSNLYASAGRWEDVRNVRELMMEKAVIKEPGRSWIELDQTIHTFYASDRSHPRREEVF 480
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 163/365 (44%), Gaps = 72/365 (19%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
++E H IK + +LI +Y+K L +R +FDEM ERN
Sbjct: 26 VREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERN---------- 75
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
+V++ +M+ GY + G+ ++AL LF++M +D +E
Sbjct: 76 ---------------------VVSWTAMISGY-SQRGFASEALHLFVQMLRSD--TEPNE 111
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
FT + L+ C GRQ+H+ + K + + F SSL+DMY+K EA VFE
Sbjct: 112 FTFATVLSSCTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFE- 170
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
C E D VS +ISGY Q G EE L+
Sbjct: 171 CLPE--------------------------------RDVVSCTAIISGYAQLGLDEEALE 198
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
LF R+ G+ N T+AS L+A GL + K++HS VL+ L + + ++D+Y
Sbjct: 199 LFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYS 258
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKN-----VVVWT 360
KC N+NYA + VR S ++M+VGYS G E + F + E+N V +
Sbjct: 259 KCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFL 318
Query: 361 ALFSG 365
A+ SG
Sbjct: 319 AVLSG 323
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H ++ L + N LI +YSK L +RK+F+ MP R V SWN ++ K
Sbjct: 235 HSHVLRCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKG 294
Query: 73 KQARSLF-----DSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+ LF ++ D VT+ ++L G + G E L++F EM + + I
Sbjct: 295 IEVVKLFKLMREENKVKPDSVTFLAVLSGCSHG-GLEDKGLEMFDEMMNGGDEI 347
>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 154/488 (31%), Positives = 269/488 (55%), Gaps = 41/488 (8%)
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
+ +L++ N ++ + G ++ A + F P VSWNT+I QNG+ E L L +
Sbjct: 96 KTDLLTSNILINMYSKCGSVDFARQVFDEMPS-RSLVSWNTMIGSLTQNGEENEALDLLL 154
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCA----KEIHSWVLKNGLISNPFVSSGIVDVY 304
+M G ++E T +S L AC KCA + +H++ +K + N FV++ ++DVY
Sbjct: 155 QMQREGTPFSEFTISSVLCACAA----KCALSECQLLHAFAIKAAMDLNVFVATALLDVY 210
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
KC G M++A F+S+ +++VV W+++ +
Sbjct: 211 AKC-------------------------------GLMKDAVCVFESMPDRSVVTWSSMAA 239
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
GYV+ + E L + + G+ D ++ ++ ACA AA+ GK+++A + + G
Sbjct: 240 GYVQNEMYEQALALFRK-AWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFC 298
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
+ + S+L+DMY+KCG + + +F++ +R++VL+N MI+ + H + ++LFE+M
Sbjct: 299 SNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKM 358
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
+ G+ P+ VTFV++LSA H G V G+KYF+ MT ++ ++P HY+CM+D RA Q
Sbjct: 359 QQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQ 418
Query: 545 LEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANV 604
+ +A + + +P A + GS L CR + N ELA A +KL +E +N Y+ L+N+
Sbjct: 419 IFEAYDLISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNM 478
Query: 605 YAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIF 664
YAA G W E+ ++RK ++ + G SW+ ++ ++H+F VG+ +HPK IYS L
Sbjct: 479 YAANGKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEV 538
Query: 665 TGELYEIA 672
EL ++
Sbjct: 539 MDELQKLG 546
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 183/403 (45%), Gaps = 101/403 (25%)
Query: 12 CHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHD 71
CH Q + GL +T+N LI++YSK + +R++FDEMP R++ SWNT+I
Sbjct: 86 CHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMI-------- 137
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
G + G E +AL L ++MQ E EFT++S
Sbjct: 138 ------------------------GSLTQNGEENEALDLLLQMQR--EGTPFSEFTISSV 171
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L C + + LHAF +K + D + F ++L+D+Y+KC ++A VFE +
Sbjct: 172 LCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDR-- 229
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
V+W+++ +GYVQN E+ L LF +
Sbjct: 230 -------------------------------SVVTWSSMAAGYVQNEMYEQALALFRKAW 258
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
E G++ ++ +S + AC GL + K++++ + K+G SN FV+S ++D+Y KC
Sbjct: 259 ETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKC---- 314
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK-AQ 370
G +EE+ + F + ++NVV+W A+ SG + A+
Sbjct: 315 ---------------------------GGIEESYKVFRDVEKRNVVLWNAMISGLSRHAR 347
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
+ E + +L E + + G+ + + V +L AC + G++
Sbjct: 348 SLEVM--ILFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQK 388
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 61/120 (50%)
Query: 383 VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGN 442
TK+ T + +L CA + L GK HA IL MG++ D + L++MYSKCG+
Sbjct: 55 TTKDFNATHVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGS 114
Query: 443 MTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
+ +A +F R LV +N MI +G E +A+ L +M +G T ++L A
Sbjct: 115 VDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCA 174
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 107/254 (42%), Gaps = 61/254 (24%)
Query: 18 KAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARS 77
K+G + LI +Y+K + ES K+F ++ +RNV WN +IS + ARS
Sbjct: 294 KSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLS-----RHARS 348
Query: 78 LFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVK 137
L + + LF +MQ + ++ T S L+ C
Sbjct: 349 L---------------------------EVMILFEKMQQMG--LSPNDVTFVSVLSACGH 379
Query: 138 LLNVGFGRQLHAFMVKTSNDASG-FAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISK- 195
+ V G++ M K + A F S ++D S+ A ++FE +LISK
Sbjct: 380 MGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSR------AGQIFEA----YDLISKL 429
Query: 196 ---------NAMVAACCREGEMEM----ALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
+++A+C G +E+ A K F +P +++ ++ L + Y NG +E
Sbjct: 430 PFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEP--HNSGNYLLLSNMYAANGKWDE 487
Query: 243 GLKLFVRMGENGVR 256
K+ + E+ V+
Sbjct: 488 VAKMRKLLKESDVK 501
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 175/625 (28%), Positives = 303/625 (48%), Gaps = 83/625 (13%)
Query: 57 FSWNTIISACI-----KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLF 111
F W+ ++A + + + AR LFD P +D+ ++N+M+ GY + G +AL L
Sbjct: 181 FMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQS-GNAKEALTLS 239
Query: 112 IEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYS 171
+++ MD TV S L+ C + + G +H++ +K ++ F + LID+Y+
Sbjct: 240 NGLRA------MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYA 293
Query: 172 KCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLI 231
+ + +VF+ + + D +SWN++I
Sbjct: 294 EFGRLRDCQKVFD---------------------------------RMYVRDLISWNSII 320
Query: 232 SGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI 291
Y N + LF M + ++ + T S S L +++ + + + L+ G
Sbjct: 321 KAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGW- 379
Query: 292 SNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL 351
+ E + + V +V Y+ G ++ AR F+ L
Sbjct: 380 --------------------FLEDITIGNAV---------VVMYAKLGLVDSARAVFNWL 410
Query: 352 TEKNVVVWTALFSGYVK---AQNCEALFDLLSEFVTKEG-VVTDALILVILLGACALQAA 407
+V+ W + SGY + A +++++ E EG + + V +L AC+ A
Sbjct: 411 PNTDVISWNTIISGYAQNGFASEAIEMYNIMEE----EGEIAANQGTWVSVLPACSQAGA 466
Query: 408 LHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIAC 467
L G ++H +L+ G+ +D ++++L DMY KCG + A +F + V +N +IAC
Sbjct: 467 LRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIAC 526
Query: 468 YAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISP 527
+ HGH EKA++LF+EML++G+KPD +TFV +LSA H G V+ G+ F M DY I+P
Sbjct: 527 HGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITP 586
Query: 528 ETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKL 587
HY CM+D+YGRA QLE A++F+KS+ + DA I G+ L+ CR++ N +L A E L
Sbjct: 587 SLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHL 646
Query: 588 LRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVG 647
+E + +V L+N+YA+ G W + IR G + G S + V++++ +F G
Sbjct: 647 FEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTG 706
Query: 648 DVSHPKTNAIYSVLAIFTGELYEIA 672
+ +HP +Y L +L I
Sbjct: 707 NQTHPMYEEMYRELTALQAKLKMIG 731
>gi|334188487|ref|NP_200728.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170817|sp|Q9FIF7.1|PP435_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic; Flags: Precursor
gi|9759241|dbj|BAB09765.1| unnamed protein product [Arabidopsis thaliana]
gi|332009773|gb|AED97156.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 544
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 163/535 (30%), Positives = 279/535 (52%), Gaps = 41/535 (7%)
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
T+ S L C + +V +HA +++T +D F V LI + S + A VF
Sbjct: 31 TLISVLRSCKNIAHVP---SIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVF--- 84
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
++ P + + +I G+V +G + +G+ L
Sbjct: 85 ---------------------------SYVSNP---NVYLYTAMIDGFVSSGRSADGVSL 114
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
+ RM N V + + S L AC ++K +EIH+ VLK G S+ V ++++Y K
Sbjct: 115 YHRMIHNSVLPDNYVITSVLKAC----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGK 170
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
+ A+ M R+ + + MI YS G ++EA F + K+ V WTA+ G
Sbjct: 171 SGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGL 230
Query: 367 VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMD 426
V+ + +L E + E V + V +L AC+ AL G+ +H+++ +++
Sbjct: 231 VRNKEMNKALELFRE-MQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELS 289
Query: 427 KKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
+ + L++MYS+CG++ A +F+ ++D++ YN MI+ A HG +AI F +M+
Sbjct: 290 NFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVN 349
Query: 487 KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLE 546
+G +P+ VT VA+L+A H G +++G + FNSM + + P+ +HY C++DL GR +LE
Sbjct: 350 RGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLE 409
Query: 547 KAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYA 606
+A F+++IP E D ++LG+ L+ C+++ N EL + ++L E + YV L+N+YA
Sbjct: 410 EAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYA 469
Query: 607 AEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+ G W E IR+ MR + GCS + V+++IH F VGD++HP AIY L
Sbjct: 470 SSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRL 524
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 103/467 (22%), Positives = 207/467 (44%), Gaps = 50/467 (10%)
Query: 46 KLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEA 105
K+ +++ F +I C + A +F + ++ Y +M+ G++++ G A
Sbjct: 51 KIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSS-GRSA 109
Query: 106 DALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS 165
D + L+ M + D + +TS L C ++ R++HA ++K +S
Sbjct: 110 DGVSLYHRM--IHNSVLPDNYVITSVLKAC----DLKVCREIHAQVLKLGFGSSRSVGLK 163
Query: 166 LIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAV 225
++++Y K A ++F+ + + ++ M+ G ++ AL+ F + ++ D V
Sbjct: 164 MMEIYGKSGELVNAKKMFDEMPDR-DHVAATVMINCYSECGFIKEALELF-QDVKIKDTV 221
Query: 226 SWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWV 285
W +I G V+N + + L+LF M V NE T LSAC L ++ + +HS+V
Sbjct: 222 CWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFV 281
Query: 286 LKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEAR 345
+ + FV + ++++Y +C G++ EAR
Sbjct: 282 ENQRMELSNFVGNALINMYSRC-------------------------------GDINEAR 310
Query: 346 RHFDSLTEKNVVVWTALFSGY-VKAQNCEALFDLLSEF--VTKEGVVTDALILVILLGAC 402
R F + +K+V+ + + SG + + EA ++EF + G + + LV LL AC
Sbjct: 311 RVFRVMRDKDVISYNTMISGLAMHGASVEA----INEFRDMVNRGFRPNQVTLVALLNAC 366
Query: 403 ALQAALHPGKEIHAYILRM-GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVL 460
+ L G E+ + R+ V+ + +VD+ + G + A +N IE D ++
Sbjct: 367 SHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIM 426
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCG 507
+++ HG+ E + + + E PD+ T+V + + + G
Sbjct: 427 LGTLLSACKIHGNMELGEKIAKRLFESE-NPDSGTYVLLSNLYASSG 472
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 125/269 (46%), Gaps = 36/269 (13%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
+++ +LK H Q +K G + +++ IY K L ++K+FDEMP+R+ +
Sbjct: 134 LKACDLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAAT 193
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
+I+ + +K+A LF KD V + +M+ G + + AL+LF EMQ E+
Sbjct: 194 VMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNK-ALELFREMQM--EN 250
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
+ +EFT L+ C L + GR +H+F+ + S F ++LI+MYS+C EA
Sbjct: 251 VSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEAR 310
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
RVF R D +S+NT+ISG +G +
Sbjct: 311 RVF---------------------------------RVMRDKDVISYNTMISGLAMHGAS 337
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSAC 269
E + F M G R N+ T + L+AC
Sbjct: 338 VEAINEFRDMVNRGFRPNQVTLVALLNAC 366
>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 698
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 198/654 (30%), Positives = 306/654 (46%), Gaps = 75/654 (11%)
Query: 24 TTITTNQLIHIYSKHNLLRESRKLFDEM-----PERNVFSWNTIISACIKSHDLKQARSL 78
TT+ L+ + LR R L + + F N +I+ DL A L
Sbjct: 19 TTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRL 78
Query: 79 FDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKL 138
F + P ++ V++ +++ G ++ ADAL F M+ A + F ++S L
Sbjct: 79 FAAMPRRNAVSWTTLVSG-LSQNLMHADALAAFAAMRRAG--VAPTRFALSSAARAAAAL 135
Query: 139 LNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAM 198
G QLH V+ D F S+L DMYSKC EACRVF+
Sbjct: 136 GAPLPGAQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFD-------------- 181
Query: 199 VAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG-VRW 257
Q DAV+W +I GY +NG E + F M G V
Sbjct: 182 -------------------QMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGA 222
Query: 258 NEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESML 317
++H F S LSA GL++ +K IH V K G V + ++D+Y K ++ A +L
Sbjct: 223 DQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVL 282
Query: 318 LL-KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALF 376
+ G N S +SMI GY +EEA +V++ L
Sbjct: 283 KIDPGGWNVVSGTSMIDGYIETDCVEEA-----------LVIYVEL-------------- 317
Query: 377 DLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDM 436
++GV + ++ CA+QA L G ++HA +++ + D + STLVDM
Sbjct: 318 -------RRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDM 370
Query: 437 YSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTF 496
Y KCG ++ + +F R + +N +I +A HGH +AI F+ M+ GI+P+ + F
Sbjct: 371 YGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAF 430
Query: 497 VAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIP 556
V++L+A H G V+ G KYF SM + I P+ +HY+C+ID YGRA +L++A +F+ +P
Sbjct: 431 VSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMP 490
Query: 557 TEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGR 616
+ +A S L CR+ + EL A + L++LE N +V L+ +YA+ G W ++
Sbjct: 491 IKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKA 550
Query: 617 IRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYE 670
+RK MR + + G SWV + H+F D SHP+ IY L T + E
Sbjct: 551 VRKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKE 604
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 105/502 (20%), Positives = 190/502 (37%), Gaps = 132/502 (26%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H ++ G + L +YSK LL E+ ++FD+MP+++ +W +I K+ L
Sbjct: 145 HCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSL 204
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+ A F + LV AD+H+ S L
Sbjct: 205 EAAVLSFRDMKREGLV---------------------------GADQHV------FCSVL 231
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ L + + +H + K + ++LIDMY+K E A RV +
Sbjct: 232 SASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLK-------- 283
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
P + VS ++I GY++ EE L ++V +
Sbjct: 284 ------------------------IDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRR 319
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
GV NE TF+S + C ++ ++H+ V+K LI + FV S +VD+Y KC ++
Sbjct: 320 QGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISL 379
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
+ + R + +++I ++ G+ EA + FD + ++S
Sbjct: 380 SMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRM----------IYS-------- 421
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG-KEIHAYILRMGVQMDKKLIS 431
G+ + + V LL AC+ + G K ++ G++ ++ S
Sbjct: 422 --------------GIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYS 467
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
++D Y + G + A ++ + E IKP
Sbjct: 468 CIIDTYGRAGRLDEA----------------------------------YKFISEMPIKP 493
Query: 492 DAVTFVAILSAFRHCGSVEMGE 513
+A + ++L A R GS E+GE
Sbjct: 494 NAYGWCSLLGACRMRGSKELGE 515
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 5/116 (4%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L++ H Q IK L + + L+ +Y K L+ S +LF+E+ R +WN +I+
Sbjct: 342 LEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINV 401
Query: 66 CIKSHDLKQARSLFD----SSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSA 117
+ ++A FD S + + + S+L +A G + LK F M+ A
Sbjct: 402 FAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHA-GLVDEGLKYFYSMKEA 456
>gi|297741829|emb|CBI33142.3| unnamed protein product [Vitis vinifera]
Length = 1198
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 155/494 (31%), Positives = 272/494 (55%), Gaps = 11/494 (2%)
Query: 164 SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELND 223
+S+I Y K C++E+ R+F G N++S N+M+A C + ++ A + F P+ N
Sbjct: 10 NSIITGYWKNGCFDESKRLF-GLMPTKNVVSWNSMIAGCIEDERIDEAWQYFQAMPQRNT 68
Query: 224 AVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHS 283
A SWN +ISG V+ EE +LF M R N ++ + + + ++ A+ + +
Sbjct: 69 A-SWNAMISGLVRYDRVEEASRLFEEMP----RRNVISYTAMVDGYAKIGEIEQARALFN 123
Query: 284 WVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEE 343
+ + ++S + SG Y + + AE++ +N ++++MI GY +G ++
Sbjct: 124 CMPQKNVVSWTVMISG----YVENGKFDEAENLFEQMPDKNIVAMTAMITGYCKEGKTDK 179
Query: 344 ARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACA 403
A+ FD + +++ W A+ +GY + + E L S+ + K G+ D L+ +L AC+
Sbjct: 180 AKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQML-KMGMQPDHSTLISVLTACS 238
Query: 404 LQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNV 463
A+L G++ H +L+ G + + + L+ MY KCG++ +E+ F+ D+V +N
Sbjct: 239 SLASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNA 298
Query: 464 MIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADY 523
MIA +A HG ++A+ F EM ++PD +TF+++LSA H G V +FNSM Y
Sbjct: 299 MIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIESY 358
Query: 524 KISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEA 583
KI P +H+AC++D+ R Q+EKA + ++ +P E D I G+ L C ++ N +L A
Sbjct: 359 KIVPRPEHFACLVDILSRGGQVEKAYKIIQEMPFEADCGIWGALLAACHVHLNVKLGELA 418
Query: 584 EEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHI 643
+K++ LE N YV L+N+YAA G W E+ R+R MR + SW+ +++++H
Sbjct: 419 AKKIVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRGLMREQGVKKQPAYSWMEIDNKVHF 478
Query: 644 FTVGDVSHPKTNAI 657
F D SHP+ + I
Sbjct: 479 FLGDDASHPEIHRI 492
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/452 (25%), Positives = 212/452 (46%), Gaps = 54/452 (11%)
Query: 25 TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPH 84
T++ N +I Y K+ ES++LF MP +NV SWN++I+ CI+ + +A F + P
Sbjct: 6 TVSWNSIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYFQAMPQ 65
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
++ ++N+M+ G + + E +A +LF EM R + + T+ ++ K+ +
Sbjct: 66 RNTASWNAMISGLVRYDRVE-EASRLFEEMP------RRNVISYTAMVDGYAKIGEIEQA 118
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
R L F + + V +I Y + ++EA +FE ++ N+++ AM+ C+
Sbjct: 119 RAL--FNCMPQKNVVSWTV--MISGYVENGKFDEAENLFEQMPDK-NIVAMTAMITGYCK 173
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFAS 264
EG+ + A K + Q D SWN +I+GY QNG EE LKL +M + G++ + T S
Sbjct: 174 EGKTDKA-KILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLIS 232
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
L+AC L +++ ++ H VLK+G S + + ++ +YCKC
Sbjct: 233 VLTACSSLASLQEGRKTHVLVLKSGYESRISICNALITMYCKC----------------- 275
Query: 325 SFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFD-LLSEF- 382
G++ ++ F + +VV W A+ + + + +D L+ F
Sbjct: 276 --------------GSILDSELAFRQIDHPDVVSWNAMIAAFAR----HGFYDRALASFG 317
Query: 383 -VTKEGVVTDALILVILLGACALQAALHPGKE-IHAYILRMGVQMDKKLISTLVDMYSKC 440
+ V D + + LL AC +H ++ I + + + LVD+ S+
Sbjct: 318 EMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIESYKIVPRPEHFACLVDILSRG 377
Query: 441 GNMTYAEIIFQNF-IERDLVLYNVMI-ACYAH 470
G + A I Q E D ++ ++ AC+ H
Sbjct: 378 GQVEKAYKIIQEMPFEADCGIWGALLAACHVH 409
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 202/684 (29%), Positives = 313/684 (45%), Gaps = 111/684 (16%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
+ ++F NT+I+ ++ D AR LFD P ++ VT+ ++ GY G DA +
Sbjct: 32 DSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQ-NGMPEDACGVLK 90
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVK-LLNVGFGRQLHAFMVKTS-NDASGFAVSSLIDMY 170
EM E + F S + C + +L GRQ+H + ++T NDA + LI+MY
Sbjct: 91 EM--IFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMY 148
Query: 171 SKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTL 230
+KC G+++ A F + D+VSWN++
Sbjct: 149 AKC--------------------------------GDIDHARSVFGLMVD-KDSVSWNSM 175
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL 290
I+G QN E+ +K + M + G+ + SALS+C L + ++ H +K GL
Sbjct: 176 ITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGL 235
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQG-NMEEARRHF- 348
+ VS+ ++ +Y + + + + R+ S +++I + G ++ EA F
Sbjct: 236 DMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFL 295
Query: 349 ---------------------DSLTEKNV-----------------VVWTALFSGYVKA- 369
SL+ + + AL + Y K+
Sbjct: 296 EMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSG 355
Query: 370 --QNCEALFDLLSE----------------------------FVTKEGVVTDALILVILL 399
+NCE +F +SE + + G D +L
Sbjct: 356 EMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVL 415
Query: 400 GACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLV 459
ACA A L G E+HA +R ++ D + S LVDMYSKCG + YA F R+L
Sbjct: 416 SACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLY 475
Query: 460 LYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSM 519
+N MI+ YA HGH + A+ LF M G PD +TFV +LSA H G V+ G +YF SM
Sbjct: 476 SWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSM 535
Query: 520 TADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNV-CRLN-RNA 577
T Y + P +HY+CM+DL GRA +L+K F+ +P + + +I + L CR N R
Sbjct: 536 TEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGACCRGNGRKT 595
Query: 578 ELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYV 637
EL A E L ++ N YV L+N+YA+ G W +M R R+ MR + AGCSWV +
Sbjct: 596 ELGRRAAEMLFNMDPQNAVNYVLLSNMYASGGKWEDMARTRRAMREAAVKKEAGCSWVTM 655
Query: 638 EHEIHIFTVGDVSHPKTNAIYSVL 661
+ +H+F GD SHP+ IY+ L
Sbjct: 656 KDGVHVFVAGDNSHPEKGLIYAKL 679
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 126/505 (24%), Positives = 209/505 (41%), Gaps = 108/505 (21%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + IK GL + +N L+ +Y++ + L E +K+F M ER+ SWNT+I A
Sbjct: 227 HGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGA------- 279
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
L DS ++A+++F+EM A + T + L
Sbjct: 280 -----LADSGASV-------------------SEAIEVFLEMMRAG--WSPNRVTFINLL 313
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
L Q+HA ++K + ++ N
Sbjct: 314 ATVSSLSTSKLSHQIHALILKYN-------------------------------VKDDNA 342
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
I +NA++A + GEME + F R E D VSWN++ISGY+ N + + L M +
Sbjct: 343 I-ENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQ 401
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G R + TFA+ LSAC + ++C E+H+ ++ L S+ + S +VD+Y KC ++Y
Sbjct: 402 RGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDY 461
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
A L VRN +S +SMI GY+ G+ + A R F +
Sbjct: 462 ASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRM--------------------- 500
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM-GVQMDKKLIS 431
G + D + V +L AC+ + G E + + G+ + S
Sbjct: 501 -----------KLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYS 549
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMI------ACYAHHGHEEKAILLFEEML 485
+VD+ + G + E NFI + + N++I AC +G + + EML
Sbjct: 550 CMVDLLGRAGELDKIE----NFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEML 605
Query: 486 EKGIKPDAVTFVAILSAFRHCGSVE 510
+AV +V + + + G E
Sbjct: 606 FNMDPQNAVNYVLLSNMYASGGKWE 630
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 125/256 (48%), Gaps = 12/256 (4%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
++ EA+ ++ ++AG + +T L+ S + + S ++ + + NV N I +
Sbjct: 286 SVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIEN 345
Query: 65 ACI----KSHDLKQARSLFDS-SPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
A + KS +++ +F S +D V++NSM+ GYI+ E +++ MQ
Sbjct: 346 ALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQ- 404
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
R+D FT + L+ C + + G ++HA ++ ++ S+L+DMYSKC + A
Sbjct: 405 --RLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYA 462
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQP---ELNDAVSWNTLISGYVQ 236
R F NL S N+M++ R G + AL+ F R +L D +++ ++S
Sbjct: 463 SRFFN-LMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSH 521
Query: 237 NGDAEEGLKLFVRMGE 252
G +EG + F M E
Sbjct: 522 IGLVDEGFEYFKSMTE 537
>gi|125577145|gb|EAZ18367.1| hypothetical protein OsJ_33897 [Oryza sativa Japonica Group]
Length = 730
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 175/605 (28%), Positives = 294/605 (48%), Gaps = 88/605 (14%)
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGY-INAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
+ AR LFD P +++VT+ +++ GY +N++ A L++F+EM + +T+ +T
Sbjct: 90 RDARRLFDGMPERNVVTWTALVTGYTLNSQ--PALGLEVFVEMLEMGRYP--SHYTLGAT 145
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
LN C+ +V G+Q+H + +K ++ +SL +Y+K
Sbjct: 146 LNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKL------------------ 187
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD-AEEGLKLFVRM 250
G ++ AL+ FWR PE N ++W T+IS ++ + E G+ LF+ M
Sbjct: 188 --------------GSLDSALRAFWRIPEKN-VITWTTMISACAEDEECVELGMSLFIDM 232
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
+GV NE T S +S C ++ K++ ++ K G +N V + + +Y +
Sbjct: 233 LMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLR---- 288
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV--- 367
+G +EA R F+ + + +++ W A+ SGY
Sbjct: 289 ---------------------------KGETDEAMRLFEQMEDASIITWNAMISGYAQIM 321
Query: 368 ---------KAQNCEAL--FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHA 416
+++ +AL F L V K + T + IL + C+ AL G++IHA
Sbjct: 322 DSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSV----CSAMMALEQGEQIHA 377
Query: 417 YILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
++ G D + S LV+MY+KCG + A F R V + MI+ Y+ HG ++
Sbjct: 378 QTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQE 437
Query: 477 AILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMI 536
AI LFEEM G++P+ +TFV++LSA + G VE E YF+ M +Y I P DHY CMI
Sbjct: 438 AIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMI 497
Query: 537 DLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKA 596
D++ R ++E A F+K E + I S + CR + N ELA A +KLL L+
Sbjct: 498 DMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIE 557
Query: 597 RYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNA 656
Y+ L N+Y + W ++ R+RK M+ SW+ ++ +++ F D +HP+
Sbjct: 558 TYILLLNMYISTERWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATE 617
Query: 657 IYSVL 661
+Y +L
Sbjct: 618 LYQLL 622
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 195/454 (42%), Gaps = 94/454 (20%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H AIK G T N L +Y+K L + + F +PE+NV +W T+ISAC + +
Sbjct: 162 HGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEEC 221
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+ + LFI+M + + +EFT+TS +
Sbjct: 222 VEL-------------------------------GMSLFIDMLM--DGVMPNEFTLTSVM 248
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+LC L++ G+Q+ AF K GC E NL
Sbjct: 249 SLCGTRLDLNLGKQVQAFSFKI------------------------------GC--ETNL 276
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE----------- 241
KN+ + R+GE + A++ F Q E ++WN +ISGY Q D+
Sbjct: 277 PVKNSTMYLYLRKGETDEAMRLF-EQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGF 335
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
+ L +F + + ++ + TF+S LS C + ++ ++IH+ +K+G +S+ V+S +V
Sbjct: 336 QALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALV 395
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL----TEKNVV 357
++Y KC + A L R + +SMI GYS G +EA + F+ + N +
Sbjct: 396 NMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEI 455
Query: 358 VWTALFSGYVKA---QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK-- 412
+ +L S A + E FD++ + E VV C + + G+
Sbjct: 456 TFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHY--------GCMIDMFVRLGRVE 507
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYA 446
+ ++I R G + ++ + S+LV GNM A
Sbjct: 508 DAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELA 541
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 165/366 (45%), Gaps = 65/366 (17%)
Query: 13 HVQAI--KAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSH 70
VQA K G N +++Y + E+ +LF++M + ++ +WN +IS +
Sbjct: 262 QVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIM 321
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
D S DL + G++A L +F +++ + ++ D FT +S
Sbjct: 322 D----------SAKDDLQA---------RSRGFQA--LTIFRDLKRS--VMKPDLFTFSS 358
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L++C ++ + G Q+HA +K+ + S+L++MY+KC C ++A + F
Sbjct: 359 ILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAF------- 411
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
+EM +TF V+W ++ISGY Q+G +E ++LF M
Sbjct: 412 -----------------LEMPTRTF---------VTWTSMISGYSQHGQPQEAIQLFEEM 445
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVS--SGIVDVYCKCE 308
GVR NE TF S LSAC V+ A+ + K I P V ++D++ +
Sbjct: 446 RLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCI-EPVVDHYGCMIDMFVRLG 504
Query: 309 NMNYAESMLLLKGVRNSFSI-SSMIVGYSLQGNMEEARRHFDSLTE---KNVVVWTALFS 364
+ A S + G + +I SS++ G GNME A D L E K + + L +
Sbjct: 505 RVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLN 564
Query: 365 GYVKAQ 370
Y+ +
Sbjct: 565 MYISTE 570
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 159/460 (34%), Positives = 245/460 (53%), Gaps = 7/460 (1%)
Query: 207 EMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASAL 266
M+ + ++Q E + W LI GY G E + L+ M G+ TF + L
Sbjct: 87 PMDPYPRLVFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALL 146
Query: 267 SACCGLRNVKCAKEIHSW-VLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNS 325
AC +V +++H+ +L G S+ +V + ++D+Y KC + + R+
Sbjct: 147 KACSAALDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDV 206
Query: 326 FSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDL-LSEFVT 384
S +S+IV Y+ GNME A FD L K++V WTA+ +GY AQN L + E +
Sbjct: 207 ISWTSLIVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGY--AQNARPREALEVFERMQ 264
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI--STLVDMYSKCGN 442
GV TD + LV ++ ACA A + + G ++ S L+DMY+KCG+
Sbjct: 265 AAGVKTDEVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGS 324
Query: 443 MTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
+ A +F+ ER++ Y+ MI +A HG A+ LF+EML+ IKP+ VTF+ +L+A
Sbjct: 325 VEDAYKVFERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTA 384
Query: 503 FRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAV 562
H G VE G++ F M + ++P DHYACM+DL GRA +LE+A+ +K +P
Sbjct: 385 CSHAGMVEQGQQLFAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGG 444
Query: 563 ILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMR 622
+ G+ L CR++ N ++A A L LE N Y+ L+N+YA+ G W ++ ++RK MR
Sbjct: 445 VWGALLGACRIHGNPDMAQIAASHLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMR 504
Query: 623 GMKGNRFAGCSWVYVEHE-IHIFTVGDVSHPKTNAIYSVL 661
+ GCSWV + IH F GD+SHPK+ I L
Sbjct: 505 AKGLKKNPGCSWVEGKKGIIHEFFAGDMSHPKSREIKQAL 544
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 145/298 (48%), Gaps = 8/298 (2%)
Query: 75 ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNL 134
R +F + + + +++ GY +G +++ L+ M+ + I FT T+ L
Sbjct: 92 PRLVFQQVEYPNPFLWTALIRGYA-LQGPFMESVLLYNSMRR--QGIGPVSFTFTALLKA 148
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAV-SSLIDMYSKCRCYEEACRVFEGCTEEVNLI 193
C L+V GRQ+H + S V ++LIDMY KC C RVF+ + ++I
Sbjct: 149 CSAALDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDR-DVI 207
Query: 194 SKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGEN 253
S +++ A + G ME A + F P + D V+W +++GY QN E L++F RM
Sbjct: 208 SWTSLIVAYAKVGNMEAASELFDGLP-MKDMVAWTAMVTGYAQNARPREALEVFERMQAA 266
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL--ISNPFVSSGIVDVYCKCENMN 311
GV+ +E T +SAC L K A + ++G SN V S ++D+Y KC ++
Sbjct: 267 GVKTDEVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVE 326
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
A + RN +S SSMIVG+++ G A FD + + + F G + A
Sbjct: 327 DAYKVFERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTA 384
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/264 (32%), Positives = 135/264 (51%), Gaps = 23/264 (8%)
Query: 13 HVQAIK-AGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHD 71
H Q I G N LI +Y K L ++FDEM +R+V SW ++I A K +
Sbjct: 162 HTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGN 221
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYI-NAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
++ A LFD P KD+V + +M+ GY NA E AL++F MQ+A ++ DE T+
Sbjct: 222 MEAASELFDGLPMKDMVAWTAMVTGYAQNARPRE--ALEVFERMQAAG--VKTDEVTLVG 277
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS-------LIDMYSKCRCYEEACRVF 183
++ C +L G +A V+ + SGF +S LIDMY+KC E+A +VF
Sbjct: 278 VISACAQL-----GAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVF 332
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTF--WRQPELN-DAVSWNTLISGYVQNGDA 240
E EE N+ S ++M+ G A++ F + E+ + V++ +++ G
Sbjct: 333 ER-MEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMV 391
Query: 241 EEGLKLFVRMGE-NGVRWNEHTFA 263
E+G +LF M E +GV +E +A
Sbjct: 392 EQGQQLFAMMEECHGVAPSEDHYA 415
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 73/188 (38%), Gaps = 47/188 (25%)
Query: 412 KEIHAYILRMGVQ----MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIAC 467
K++HA+I R G++ + KL+ TL + Y ++FQ + L+ +I
Sbjct: 56 KQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMD--PYPRLVFQQVEYPNPFLWTALIRG 113
Query: 468 YAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA------------------------- 502
YA G +++LL+ M +GI P + TF A+L A
Sbjct: 114 YALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQVHTQTILIGGFGS 173
Query: 503 -----------FRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
+ CG + G + F+ M IS + +I Y + +E A E
Sbjct: 174 DLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVIS-----WTSLIVAYAKVGNMEAASEL 228
Query: 552 MKSIPTEE 559
+P ++
Sbjct: 229 FDGLPMKD 236
>gi|449440359|ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Cucumis sativus]
Length = 595
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 172/626 (27%), Positives = 293/626 (46%), Gaps = 69/626 (11%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + + + + ++LI YSK +R++ +F ++P +N+FSWN +
Sbjct: 26 HARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVFGKIPRKNIFSWNAL---------- 75
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM-QSADEHIRMDEFTVTST 131
L++Y D LKLF + S ++ D FTVT
Sbjct: 76 --------------LISY--------TLHNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCA 113
Query: 132 LNLCVKLL-NVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L L N G +++H+F+++ + F V++LI YS+C
Sbjct: 114 LKALASLFSNSGLAKEVHSFILRRGLEYDIFVVNALITFYSRC----------------- 156
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF-VR 249
E+ +A F R PE D VSWN +++GY Q G E+ +LF V
Sbjct: 157 ---------------DELVLARIMFDRMPE-RDIVSWNAMLAGYSQGGSYEKCKELFRVM 200
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
+ V+ N T S L AC ++ E+H +V ++ + + + + ++ +Y KC +
Sbjct: 201 LSSLEVKPNALTAVSVLQACAQSNDLIFGIEVHRFVNESQIKMDVSLWNAVIGLYAKCGS 260
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
++YA + +++ + SMI GY + G + +A F + W A+ SG V+
Sbjct: 261 LDYARELFEEMLEKDAITYCSMISGYMVHGFVNQAMDLFREQERPRLPTWNAVISGLVQN 320
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
E D+ + G + + L +L + + L GKEIH Y +R + +
Sbjct: 321 NRQEGAVDIFRA-MQSHGCRPNTVTLASILPVFSHFSTLKGGKEIHGYAIRNTYDRNIYV 379
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+ ++D Y+KCG + A+++F R L+ + +I+ YA HG A+ LF EML GI
Sbjct: 380 ATAIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVHGDANVALSLFYEMLTNGI 439
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
+PD VTF ++L+A H G ++ K FN + +Y I P +HYACM+ + RA +L A+
Sbjct: 440 QPDQVTFTSVLAACAHSGELDEAWKIFNVLLPEYGIQPLVEHYACMVGVLSRAGKLSDAV 499
Query: 550 EFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEG 609
EF+ +P E A + G+ LN + + EL ++L +E N YV +AN+Y+ G
Sbjct: 500 EFISKMPLEPTAKVWGALLNGASVAGDVELGKYVFDRLFEIEPENTGNYVIMANLYSQSG 559
Query: 610 NWAEMGRIRKQMRGMKGNRFAGCSWV 635
W + IR M+ ++ + G SW+
Sbjct: 560 RWKDADTIRDLMKEVRLKKIPGNSWI 585
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 66/168 (39%), Gaps = 4/168 (2%)
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD 457
L+ C GK++HA ++ V D L S L+ YSK G++ A +F ++
Sbjct: 9 LIQHCTDHLFFRVGKQLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVFGKIPRKN 68
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKG---IKPDAVTFVAILSAFRHCGSVEMGEK 514
+ +N ++ Y H + LF ++ +KPD T L A S K
Sbjct: 69 IFSWNALLISYTLHNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCALKALASLFSNSGLAK 128
Query: 515 YFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAV 562
+S + + +I Y R ++L A +P E D V
Sbjct: 129 EVHSFILRRGLEYDIFVVNALITFYSRCDELVLARIMFDRMP-ERDIV 175
>gi|224131262|ref|XP_002328495.1| predicted protein [Populus trichocarpa]
gi|222838210|gb|EEE76575.1| predicted protein [Populus trichocarpa]
Length = 580
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 156/476 (32%), Positives = 256/476 (53%), Gaps = 6/476 (1%)
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
+N ++ G + +A + F + P D VS+N +I GY + G E ++LF M G
Sbjct: 101 QNTLIKVYLENGLVRLAHQVFEKMPS-PDIVSFNVMIVGYAKKGFGLEAMRLFHEMVGLG 159
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWV--LKNGLISNPFVSSGIVDVYCKCENMNY 312
+ +E T L +C L NVK K +H W+ K + SN + + ++D+Y KC+ +
Sbjct: 160 LEPDEFTILGLLVSCGQLGNVKFGKAVHGWMERRKPTISSNLILGNALLDMYVKCQKVEL 219
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
A ++ S + ++ G + G +E+AR F + +++V W +L +GY +
Sbjct: 220 ALRTFGALKEKDIVSWNMIVAGCAKVGELEQARLFFYQMPCRDIVSWNSLVTGYACRGDF 279
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
++ +L+ + V E V+ D + ++ L+ A AL G+ H +++RM +++D L S
Sbjct: 280 ASVKELIVDMVM-EKVIPDTVTMISLVSAATESGALDQGRWAHGWVIRMQIKLDAFLGSA 338
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
L+DMY KCG++ A +F+ ++D+ ++ MI A HG+ KA+ LF EM E + PD
Sbjct: 339 LIDMYCKCGSIERASRVFKEINKKDVTVWTTMITGLAFHGYGSKALELFSEMQED-VSPD 397
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
VTFV++LSA H G V+ G K F+SMT DY I P +HY C++DL R+ +L +A + +
Sbjct: 398 DVTFVSVLSACSHSGLVDQGIKVFSSMT-DYGIEPGVEHYGCLVDLLARSGRLSEAKDII 456
Query: 553 KSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWA 612
+P + I G+ LN C+ + ELA A +LL L+ + Y L+N+YAA G W+
Sbjct: 457 DQMPMKPSRSIWGAMLNACQAQGDVELAEIASRELLNLDPEEEGGYTLLSNIYAASGRWS 516
Query: 613 EMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
+IR+ M + AGCS V V+ +H F D HP I S+L E+
Sbjct: 517 YSKKIRETMESRGVKKTAGCSSVVVDGVVHNFISADKCHPGWVDISSILNCLKNEM 572
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 124/462 (26%), Positives = 222/462 (48%), Gaps = 45/462 (9%)
Query: 31 LIHIYSKHNLLRESRKLFDEMPERNVFSW----NTIISACIKSHDLKQARSLFDSSPHKD 86
L+++ N + + +++ + +FS+ NT+I +++ ++ A +F+ P D
Sbjct: 69 LLYLLQAVNFISQVKQIHCQAIVTGLFSFGYLQNTLIKVYLENGLVRLAHQVFEKMPSPD 128
Query: 87 LVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQ 146
+V++N M+ GY +G+ +A++LF EM + DEFT+ L C +L NV FG+
Sbjct: 129 IVSFNVMIVGYAK-KGFGLEAMRLFHEMVGLG--LEPDEFTILGLLVSCGQLGNVKFGKA 185
Query: 147 LHAFMVKTSNDASGFAV--SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
+H +M + S + ++L+DMY KC+ E A R F G +E +++S N +VA C +
Sbjct: 186 VHGWMERRKPTISSNLILGNALLDMYVKCQKVELALRTF-GALKEKDIVSWNMIVAGCAK 244
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFAS 264
GE+E A F++ P D VSWN+L++GY GD +L V M V + T S
Sbjct: 245 VGELEQARLFFYQMP-CRDIVSWNSLVTGYACRGDFASVKELIVDMVMEKVIPDTVTMIS 303
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
+SA + + H WV++ + + F+ S ++D+YCKC
Sbjct: 304 LVSAATESGALDQGRWAHGWVIRMQIKLDAFLGSALIDMYCKC----------------- 346
Query: 325 SFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVT 384
G++E A R F + +K+V VWT + +G +L SE
Sbjct: 347 --------------GSIERASRVFKEINKKDVTVWTTMITGLAFHGYGSKALELFSEM-- 390
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
+E V D + V +L AC+ + G ++ + + G++ + LVD+ ++ G ++
Sbjct: 391 QEDVSPDDVTFVSVLSACSHSGLVDQGIKVFSSMTDYGIEPGVEHYGCLVDLLARSGRLS 450
Query: 445 YA-EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
A +II Q ++ ++ M+ G E A + E+L
Sbjct: 451 EAKDIIDQMPMKPSRSIWGAMLNACQAQGDVELAEIASRELL 492
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 149/328 (45%), Gaps = 38/328 (11%)
Query: 18 KAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARS 77
K ++ I N L+ +Y K + + + F + E+++ SWN I++ C K +L+QAR
Sbjct: 194 KPTISSNLILGNALLDMYVKCQKVELALRTFGALKEKDIVSWNMIVAGCAKVGELEQARL 253
Query: 78 LFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVK 137
F P +D+V++NS++ GY G A +L ++M E + D T+ S ++ +
Sbjct: 254 FFYQMPCRDIVSWNSLVTGY-ACRGDFASVKELIVDM--VMEKVIPDTVTMISLVSAATE 310
Query: 138 LLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNA 197
+ GR H ++++ F S+LIDMY KC E A RVF +E+N
Sbjct: 311 SGALDQGRWAHGWVIRMQIKLDAFLGSALIDMYCKCGSIERASRVF----KEIN------ 360
Query: 198 MVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRW 257
D W T+I+G +G + L+LF M E+ V
Sbjct: 361 -----------------------KKDVTVWTTMITGLAFHGYGSKALELFSEMQED-VSP 396
Query: 258 NEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESML 317
++ TF S LSAC V ++ S + G+ +VD+ + ++ A+ ++
Sbjct: 397 DDVTFVSVLSACSHSGLVDQGIKVFSSMTDYGIEPGVEHYGCLVDLLARSGRLSEAKDII 456
Query: 318 LLKGVRNSFSI-SSMIVGYSLQGNMEEA 344
++ S SI +M+ QG++E A
Sbjct: 457 DQMPMKPSRSIWGAMLNACQAQGDVELA 484
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 124/280 (44%), Gaps = 17/280 (6%)
Query: 340 NMEEARRHFDSLTE-KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVIL 398
N++ A F+ T N+ ++ L S + + E+ + L + G D L+ L
Sbjct: 15 NLDLAITLFNHFTPNPNLFIYNTLISAFSSLKKIESFY--LYNVLLSSGECPDKQTLLYL 72
Query: 399 LGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDL 458
L A + + K+IH + G+ L +TL+ +Y + G + A +F+ D+
Sbjct: 73 LQAVNFISQV---KQIHCQAIVTGLFSFGYLQNTLIKVYLENGLVRLAHQVFEKMPSPDI 129
Query: 459 VLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNS 518
V +NVMI YA G +A+ LF EM+ G++PD T + +L + G+V+ G+
Sbjct: 130 VSFNVMIVGYAKKGFGLEAMRLFHEMVGLGLEPDEFTILGLLVSCGQLGNVKFGKAVHGW 189
Query: 519 M-TADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNA 577
M IS ++D+Y + ++E A+ ++ E+D V + C
Sbjct: 190 MERRKPTISSNLILGNALLDMYVKCQKVELALRTFGAL-KEKDIVSWNMIVAGC------ 242
Query: 578 ELAGEAEEKLL---RLEGNNKARYVQLANVYAAEGNWAEM 614
GE E+ L ++ + + L YA G++A +
Sbjct: 243 AKVGELEQARLFFYQMPCRDIVSWNSLVTGYACRGDFASV 282
>gi|110738388|dbj|BAF01120.1| hypothetical protein [Arabidopsis thaliana]
Length = 596
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 159/518 (30%), Positives = 262/518 (50%), Gaps = 67/518 (12%)
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
Q HA +VK D+ F +SLI YS ++ A R+F+G ++
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDK---------------- 167
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASA 265
D V+W +I G+V+NG A E + FV M + GV NE T S
Sbjct: 168 -----------------DVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSV 210
Query: 266 LSACCGLRNVKCAKEIHSWVLKNGLIS-NPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
L A + +V+ + +H L+ G + + F+ S +VD+Y KC +
Sbjct: 211 LKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYD------------- 257
Query: 325 SFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVT 384
+A++ FD + +NVV WTAL +GYV+++ C L+ E +
Sbjct: 258 ------------------DAQKVFDEMPSRNVVTWTALIAGYVQSR-CFDKGMLVFEEML 298
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
K V + L +L ACA ALH G+ +H Y+++ ++++ +TL+D+Y KCG +
Sbjct: 299 KSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLE 358
Query: 445 YAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR 504
A ++F+ E+++ + MI +A HG+ A LF ML + P+ VTF+A+LSA
Sbjct: 359 EAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACA 418
Query: 505 HCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVIL 564
H G VE G + F SM + + + DHYACM+DL+GR LE+A ++ +P E V+
Sbjct: 419 HGGLVEEGRRLFLSMKGRFNMELKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVW 478
Query: 565 GSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGM 624
G+ C L+++ EL A ++++L+ ++ RY LAN+Y+ NW E+ R+RKQM+
Sbjct: 479 GALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQ 538
Query: 625 KGNRFAGCSWVYVEHEIHIFTVGDVSHP-KTNAIYSVL 661
+ + G SW+ V+ ++ F D P +++ +Y L
Sbjct: 539 QVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTL 576
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 118/460 (25%), Positives = 205/460 (44%), Gaps = 87/460 (18%)
Query: 34 IYSKHN---LLRESRKLFDEMP------------ERNVFSWNTIISACIKSHDLKQARSL 78
I S+H LL+ KL D P + + F N++IS S A L
Sbjct: 101 IPSRHTFPPLLKAVFKLRDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRL 160
Query: 79 FDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKL 138
FD + KD+VT+ +M+ G++ G ++A+ F+EM+ + +E TV S L K+
Sbjct: 161 FDGAEDKDVVTWTAMIDGFVR-NGSASEAMVYFVEMKKTG--VAANEMTVVSVLKAAGKV 217
Query: 139 LNVGFGRQLHAFMVKTSN-DASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNA 197
+V FGR +H ++T F SSL+DMY KC CY++A +VF+ + S+N
Sbjct: 218 EDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFD------EMPSRN- 270
Query: 198 MVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRW 257
V+W LI+GYVQ+ ++G+ +F M ++ V
Sbjct: 271 --------------------------VVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAP 304
Query: 258 NEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESML 317
NE T +S LSAC + + + +H +++KN + N + ++D+Y KC
Sbjct: 305 NEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKC---------- 354
Query: 318 LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFD 377
G +EEA F+ L EKNV WTA+ +G+ FD
Sbjct: 355 ---------------------GCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFD 393
Query: 378 LLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL-RMGVQMDKKLISTLVDM 436
L ++ V + + + +L ACA + G+ + + R +++ + +VD+
Sbjct: 394 LFYTMLSSH-VSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMELKADHYACMVDL 452
Query: 437 YSKCGNMTYAEIIFQNF-IERDLVLYNVMI-ACYAHHGHE 474
+ + G + A+ + + +E V++ + +C H +E
Sbjct: 453 FGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYE 492
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 150/327 (45%), Gaps = 39/327 (11%)
Query: 227 WNTLISGYVQNG---DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHS 283
W++LI G+ G + + M NGV + HTF L A LR+ + H+
Sbjct: 70 WDSLI-GHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSN-PFQFHA 127
Query: 284 WVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEE 343
++K GL S+PF VRN S+I GYS G +
Sbjct: 128 HIVKFGLDSDPF--------------------------VRN-----SLISGYSSSGLFDF 156
Query: 344 ARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACA 403
A R FD +K+VV WTA+ G+V+ + E + K GV + + +V +L A
Sbjct: 157 ASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVE-MKKTGVAANEMTVVSVLKAAG 215
Query: 404 LQAALHPGKEIHAYILRMG-VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYN 462
+ G+ +H L G V+ D + S+LVDMY KC A+ +F R++V +
Sbjct: 216 KVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWT 275
Query: 463 VMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTAD 522
+IA Y +K +L+FEEML+ + P+ T ++LSA H G++ G + M +
Sbjct: 276 ALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKN 335
Query: 523 YKISPETDHYACMIDLYGRANQLEKAI 549
I T +IDLY + LE+AI
Sbjct: 336 -SIEINTTAGTTLIDLYVKCGCLEEAI 361
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 128/274 (46%), Gaps = 41/274 (14%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPER-----N 55
+R+ + EA++ V+ K G+ +T ++ K +R R + E +
Sbjct: 180 VRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCD 239
Query: 56 VFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQ 115
VF ++++ K A+ +FD P +++VT+ +++ GY+ + ++ L +F EM
Sbjct: 240 VFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGML-VFEEML 298
Query: 116 SADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRC 175
+D + +E T++S L+ C + + GR++H +M+K S + + A ++LID+Y KC C
Sbjct: 299 KSD--VAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGC 356
Query: 176 YEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYV 235
EEA VFE E+ + +W +I+G+
Sbjct: 357 LEEAILVFERLHEK---------------------------------NVYTWTAMINGFA 383
Query: 236 QNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
+G A + LF M + V NE TF + LSAC
Sbjct: 384 AHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSAC 417
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 97/218 (44%), Gaps = 6/218 (2%)
Query: 344 ARRHFDSLTEKNVVVWTAL---FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLG 400
ARR L ++ +W +L FSG + L L + + GV+ LL
Sbjct: 55 ARRLLCQLQTLSIQLWDSLIGHFSGGITLN--RRLSFLAYRHMRRNGVIPSRHTFPPLLK 112
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL 460
A +P + HA+I++ G+ D + ++L+ YS G +A +F ++D+V
Sbjct: 113 AVFKLRDSNPF-QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVT 171
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
+ MI + +G +A++ F EM + G+ + +T V++L A V G
Sbjct: 172 WTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYL 231
Query: 521 ADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE 558
++ + + ++D+YG+ + + A + +P+
Sbjct: 232 ETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSR 269
>gi|78499697|gb|ABB45851.1| hypothetical protein [Eutrema halophilum]
Length = 697
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 170/648 (26%), Positives = 308/648 (47%), Gaps = 78/648 (12%)
Query: 16 AIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQA 75
A+KA + I + +H Y++ L S VF + ++ ++ + ++
Sbjct: 102 ALKACGQSSNIAYGESLHAYAEKTFLLSS-----------VFVGSALLDMYMRIGKIDKS 150
Query: 76 RSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLC 135
+F P ++ VT+ + + G ++A G + L+ F +M S + + D F L C
Sbjct: 151 CRVFAEMPFRNSVTWTAFITGLVHA-GLHYEGLRYFSQM-SRFKQLSSDTFAFAIALKAC 208
Query: 136 VKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISK 195
L V +GR++H ++ A + +SL MY++C ++ R+FE +E
Sbjct: 209 ADLRQVKYGREIHTHVIVKGFAAILWVANSLATMYTECGEMQDGLRLFESMSER------ 262
Query: 196 NAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGV 255
D V W +LI+ Y++ G E+ + F+ M + V
Sbjct: 263 ---------------------------DVVLWTSLITAYIRIGQEEKAVNTFLLMRNSQV 295
Query: 256 RWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAES 315
NE TFAS +AC L + +++H V GL + VS+ ++ +Y C ++ A
Sbjct: 296 SPNEQTFASTFAACASLSRLVWGEQLHGNVFSLGLGDSLSVSNSMMKMYSTCAKLDSAS- 354
Query: 316 MLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEAL 375
+L +G+R ++++ W+ + GY +A E
Sbjct: 355 -VLFQGMRC-----------------------------RDIISWSTIIGGYSQAAFGEEC 384
Query: 376 FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVD 435
F S ++ + G L LL + A L G+++HA L +G++ + + S L++
Sbjct: 385 FKYFS-WMRQAGPQPTDFALASLLSVSGIMAVLEQGRQVHALALYLGLEQNPTIRSALIN 443
Query: 436 MYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVT 495
MYSKCG++ A +F+ D+V MI YA HG E+AI LFE+ L+ +PD VT
Sbjct: 444 MYSKCGSIIEASKVFEEKDRTDIVSLTAMINGYAEHGKCEEAIDLFEKSLKLSFRPDDVT 503
Query: 496 FVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSI 555
F+++L+A H G +++G +YFN M +Y + P +HY CM+DL RA +L A + + +
Sbjct: 504 FISVLTACSHSGQLDLGFQYFNLMQENYNMRPAKEHYGCMVDLLCRAGRLNDAEKMINEM 563
Query: 556 PTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMG 615
P ++D V+ + L C+ + E A +++L L+ + V LAN++++ GNW E
Sbjct: 564 PWKKDDVVWTTLLRACKEKGDVERGRRAAQRILELDPTSFTTLVTLANIHSSTGNWKEAA 623
Query: 616 RIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAI 663
+RK M+ + G S + ++ ++ F G +SHP++ + S+L +
Sbjct: 624 NVRKDMKSKGVIKEPGWSSILIKDQVSAFASGSLSHPQSEDVCSILEL 671
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/450 (25%), Positives = 203/450 (45%), Gaps = 69/450 (15%)
Query: 67 IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEF 126
I S L+ AR +FD P +D+ ++ +++ GY+ A E +AL LF M+ + D +
Sbjct: 39 IDSGKLRVARQVFDKMPRRDIKSWTAIMKGYVAATKPE-EALILFSAMRVDPLGVSGDTY 97
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
++ L C + N+ +G LHA+ KT +S F S+L+DMY + +++CRVF
Sbjct: 98 VLSVALKACGQSSNIAYGESLHAYAEKTFLLSSVFVGSALLDMYMRIGKIDKSCRVFA-- 155
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
EM + ++V+W I+G V G EGL+
Sbjct: 156 ----------------------EMPFR---------NSVTWTAFITGLVHAGLHYEGLRY 184
Query: 247 FVRMGE-NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
F +M + + FA AL AC LR VK +EIH+ V+ G + +V++ + +Y
Sbjct: 185 FSQMSRFKQLSSDTFAFAIALKACADLRQVKYGREIHTHVIVKGFAAILWVANSLATMYT 244
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
+C G M++ R F+S++E++VV+WT+L +
Sbjct: 245 EC-------------------------------GEMQDGLRLFESMSERDVVLWTSLITA 273
Query: 366 YVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
Y++ Q +A+ L + V + ACA + L G+++H + +G+
Sbjct: 274 YIRIGQEEKAVNTFL--LMRNSQVSPNEQTFASTFAACASLSRLVWGEQLHGNVFSLGLG 331
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
+ ++++ MYS C + A ++FQ RD++ ++ +I Y+ E+ F M
Sbjct: 332 DSLSVSNSMMKMYSTCAKLDSASVLFQGMRCRDIISWSTIIGGYSQAAFGEECFKYFSWM 391
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
+ G +P ++LS +E G +
Sbjct: 392 RQAGPQPTDFALASLLSVSGIMAVLEQGRQ 421
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 154/345 (44%), Gaps = 46/345 (13%)
Query: 181 RVFEGCTEEV------NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
R+ CT + N + ++ + G++ +A + F + P D SW ++ GY
Sbjct: 11 RIRRFCTASIEKSMHSNHVDTHSQLQDLIDSGKLRVARQVFDKMPR-RDIKSWTAIMKGY 69
Query: 235 VQNGDAEEGLKLF--VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
V EE L LF +R+ GV + + + AL AC N+ + +H++ K L+S
Sbjct: 70 VAATKPEEALILFSAMRVDPLGVSGDTYVLSVALKACGQSSNIAYGESLHAYAEKTFLLS 129
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
+ FV S ++D+Y + G ++++ R F +
Sbjct: 130 SVFVGSALLDMYMRI-------------------------------GKIDKSCRVFAEMP 158
Query: 353 EKNVVVWTALFSGYVKAQ-NCEAL--FDLLSEFVTKEGVVTDALILVILLGACALQAALH 409
+N V WTA +G V A + E L F +S F + + +D I L ACA +
Sbjct: 159 FRNSVTWTAFITGLVHAGLHYEGLRYFSQMSRF---KQLSSDTFAFAIALKACADLRQVK 215
Query: 410 PGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYA 469
G+EIH +++ G + ++L MY++CG M +F++ ERD+VL+ +I Y
Sbjct: 216 YGREIHTHVIVKGFAAILWVANSLATMYTECGEMQDGLRLFESMSERDVVLWTSLITAYI 275
Query: 470 HHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
G EEKA+ F M + P+ TF + +A + GE+
Sbjct: 276 RIGQEEKAVNTFLLMRNSQVSPNEQTFASTFAACASLSRLVWGEQ 320
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 107/491 (21%), Positives = 191/491 (38%), Gaps = 103/491 (20%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H I G N L +Y++ +++ +LF+ M ER+V W ++I+A I+
Sbjct: 221 HTHVIVKGFAAILWVANSLATMYTECGEMQDGLRLFESMSERDVVLWTSLITAYIRI--- 277
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
G E A+ F+ M+++ + +E T ST
Sbjct: 278 -----------------------------GQEEKAVNTFLLMRNS--QVSPNEQTFASTF 306
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C L + +G QLH + S +S++ MYS C + A +F+G
Sbjct: 307 AACASLSRLVWGEQLHGNVFSLGLGDSLSVSNSMMKMYSTCAKLDSASVLFQGMR----- 361
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
CR D +SW+T+I GY Q EE K F M +
Sbjct: 362 ----------CR------------------DIISWSTIIGGYSQAAFGEECFKYFSWMRQ 393
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G + + AS LS + ++ +++H+ L GL NP + S ++++Y KC
Sbjct: 394 AGPQPTDFALASLLSVSGIMAVLEQGRQVHALALYLGLEQNPTIRSALINMYSKC----- 448
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G++ EA + F+ ++V TA+ +GY + C
Sbjct: 449 --------------------------GSIIEASKVFEEKDRTDIVSLTAMINGYAEHGKC 482
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR-MGVQMDKKLIS 431
E DL E K D + + +L AC+ L G + + ++ K+
Sbjct: 483 EEAIDLF-EKSLKLSFRPDDVTFISVLTACSHSGQLDLGFQYFNLMQENYNMRPAKEHYG 541
Query: 432 TLVDMYSKCGNMTYAE-IIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+VD+ + G + AE +I + ++D V++ ++ G E+ + +LE +
Sbjct: 542 CMVDLLCRAGRLNDAEKMINEMPWKKDDVVWTTLLRACKEKGDVERGRRAAQRILE--LD 599
Query: 491 PDAVTFVAILS 501
P + T + L+
Sbjct: 600 PTSFTTLVTLA 610
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 94/227 (41%), Gaps = 36/227 (15%)
Query: 339 GNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF-VTKEGVVTDALILVI 397
G + AR+ FD + +++ WTA+ GYV A E L S V GV D +L +
Sbjct: 42 GKLRVARQVFDKMPRRDIKSWTAIMKGYVAATKPEEALILFSAMRVDPLGVSGDTYVLSV 101
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD 457
L AC + + G+ +HAY + + + S L+DMY + G +
Sbjct: 102 ALKACGQSSNIAYGESLHAYAEKTFLLSSVFVGSALLDMYMRIGKI-------------- 147
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFN 517
+K+ +F EM + ++VT+ A ++ H G G +YF+
Sbjct: 148 -----------------DKSCRVFAEMPFR----NSVTWTAFITGLVHAGLHYEGLRYFS 186
Query: 518 SMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVIL 564
M+ ++S +T +A + Q++ E + + A IL
Sbjct: 187 QMSRFKQLSSDTFAFAIALKACADLRQVKYGREIHTHVIVKGFAAIL 233
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 275 bits (702), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 168/507 (33%), Positives = 270/507 (53%), Gaps = 12/507 (2%)
Query: 156 NDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTF 215
N+ + A + LI Y +C + A RVFE + + + + A + G E A + F
Sbjct: 37 NNNNVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLF 96
Query: 216 WRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGV-RWNEHTFASALSACCGLRN 274
+ P+ N VS+N +++ + + + F M V WN T SAL A GL
Sbjct: 97 EKIPQPN-TVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWN--TMISAL-AQVGLMG 152
Query: 275 VKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVG 334
A+ + S + + +S S +V Y C +++ A +R+ + ++MI G
Sbjct: 153 E--ARRLFSAMPEKNCVS----WSAMVSGYVACGDLDAAVECFYAAPMRSVITWTAMITG 206
Query: 335 YSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALI 394
Y G +E A R F ++ + +V W A+ +GYV+ E L + + GV +AL
Sbjct: 207 YMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTML-ETGVKPNALS 265
Query: 395 LVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFI 454
L +L C+ +AL GK++H + + + D ++LV MYSKCG++ A +F
Sbjct: 266 LTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIP 325
Query: 455 ERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
+D+V +N MI+ YA HG +KA+ LF+EM ++G+KPD +TFVA+L A H G V++G +
Sbjct: 326 RKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQ 385
Query: 515 YFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLN 574
YFN+M D+ I + +HYACM+DL GRA +L +A++ +KS+P + I G+ L CR++
Sbjct: 386 YFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGTLLGACRIH 445
Query: 575 RNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSW 634
+N LA A + LL L+ YVQLANVYAA+ W + IR+ M+ + G SW
Sbjct: 446 KNLNLAEFAAKNLLELDPTIATGYVQLANVYAAQNRWDHVASIRRSMKDNNVVKIPGYSW 505
Query: 635 VYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+ + +H F D HP+ +I+ L
Sbjct: 506 IEINSVVHGFRSSDRLHPELASIHEKL 532
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 114/452 (25%), Positives = 203/452 (44%), Gaps = 55/452 (12%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA-CIKSHDLKQARSLFDSSPH 84
I +N+LI Y + + + ++F++M ++ +WN+I++A K + AR LF+ P
Sbjct: 42 IASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEKIPQ 101
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGF- 143
+ V+YN ML + + G DA F M D V S + L VG
Sbjct: 102 PNTVSYNIMLACHWHHLGVH-DARGFFDSMPLKD---------VASWNTMISALAQVGLM 151
Query: 144 --GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAA 201
R+L + M + + + S+++ Y C + A F ++I+ AM+
Sbjct: 152 GEARRLFSAM----PEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMR-SVITWTAMITG 206
Query: 202 CCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHT 261
+ G +E+A + F ++ + V+WN +I+GYV+NG AE+GL+LF M E GV+ N +
Sbjct: 207 YMKFGRVELAERLF-QEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALS 265
Query: 262 FASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKG 321
S L C L ++ K++H V K L S+ + +V +Y KC
Sbjct: 266 LTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKC-------------- 311
Query: 322 VRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSE 381
G++++A F + K+VV W A+ SGY + + L E
Sbjct: 312 -----------------GDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDE 354
Query: 382 FVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR-MGVQMDKKLISTLVDMYSKC 440
+ KEG+ D + V +L AC + G + + R G++ + + +VD+ +
Sbjct: 355 -MKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRA 413
Query: 441 GNMTYAEIIFQN--FIERDLVLYNVMIACYAH 470
G ++ A + ++ F + ++ AC H
Sbjct: 414 GKLSEAVDLIKSMPFKPHPAIYGTLLGACRIH 445
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 128/304 (42%), Gaps = 92/304 (30%)
Query: 25 TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPH 84
T++ N ++ + H + ++R FD MP ++V SWNT+ISA + + +AR LF + P
Sbjct: 104 TVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQVGLMGEARRLFSAMPE 163
Query: 85 KDLVTYNSMLCGYINAEGYEAD------------------------------ALKLFIEM 114
K+ V++++M+ GY+ +A A +LF EM
Sbjct: 164 KNCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVITWTAMITGYMKFGRVELAERLFQEM 223
Query: 115 Q------------------SADEHIRM-----------DEFTVTSTLNLCVKLLNVGFGR 145
A++ +R+ + ++TS L C L + G+
Sbjct: 224 SMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGK 283
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
Q+H + K + A +SL+ MYSKC
Sbjct: 284 QVHQLVCKCPLSSDTTAGTSLVSMYSKC-------------------------------- 311
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASA 265
G+++ A + F + P D V WN +ISGY Q+G ++ L+LF M + G++ + TF +
Sbjct: 312 GDLKDAWELFIQIPR-KDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAV 370
Query: 266 LSAC 269
L AC
Sbjct: 371 LLAC 374
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H K L+ T L+ +YSK L+++ +LF ++P ++V WN +IS +
Sbjct: 286 HQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAG 345
Query: 73 KQARSLFD 80
K+A LFD
Sbjct: 346 KKALRLFD 353
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 275 bits (702), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 150/455 (32%), Positives = 248/455 (54%), Gaps = 10/455 (2%)
Query: 224 AVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHS 283
A+ + +++ Y +GD + + +F +G+ TF L + L +V K +H
Sbjct: 105 ALVGSKMVAFYASSGDIDSSVSVFNGIGD------YFTFPFVLKSSVELLSVWMGKCVHG 158
Query: 284 WVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEE 343
+L+ GL + +V++ ++ +Y KC +N A + +R+ S ++++ GY+ G ++
Sbjct: 159 LILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDA 218
Query: 344 ARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKE-GVVTDALILVILLGAC 402
A F+ + +N+V WT + SGY ++ + L E V ++ GV + + ++ +L AC
Sbjct: 219 ALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPAC 278
Query: 403 ALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQ--NFIERDLVL 460
A + L G++IH RMG+ + ++ L MY+KCG++ A F N E++L+
Sbjct: 279 AQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIA 338
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
+N MI YA +GH +A+ F EM++ GI+PD +TF +LS H G V++G KYFN M+
Sbjct: 339 WNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMS 398
Query: 521 ADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELA 580
Y I+P +HYAC+ DL GRA +L +A + + +P I GS L CR +RN E+A
Sbjct: 399 TTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMA 458
Query: 581 GEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHE 640
A KL LE N YV L+N+YA G W E+ ++R ++ + GCSW+ + +
Sbjct: 459 ETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGK 518
Query: 641 IHIFTVGDVSHPKTNAIYSVLAIFTGELYEIAGAF 675
H+F GD SHP+ IY L E + AG F
Sbjct: 519 AHMFLGGDTSHPQGKEIYMFLEALP-EKMKAAGYF 552
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 129/284 (45%), Gaps = 38/284 (13%)
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
D FT L V+LL+V G+ +H +++ + +SLI +Y KC +A +VF
Sbjct: 133 DYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVF 192
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
+ T ++ S NA++A + G ++ AL F R P N VSW T+ISGY Q+G A++
Sbjct: 193 DNMTIR-DVSSWNALLAGYTKSGCIDAALAIFERMPWRN-IVSWTTMISGYSQSGLAQQA 250
Query: 244 LKLFVRM--GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
L LF M ++GVR N T S L AC L ++ ++IH + GL SN V +
Sbjct: 251 LSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALT 310
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL--TEKNVVVW 359
+Y KC G++ +AR FD L EKN++ W
Sbjct: 311 AMYAKC-------------------------------GSLVDARNCFDKLNRNEKNLIAW 339
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACA 403
+ + Y + E + + G+ D + LL C+
Sbjct: 340 NTMITAYASYGHGLQAVSTFREMI-QAGIQPDDITFTGLLSGCS 382
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 120/245 (48%), Gaps = 11/245 (4%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H ++ GL LI +Y K + ++ K+FD M R+V SWN +++ KS +
Sbjct: 157 HGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCI 216
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
A ++F+ P +++V++ +M+ GY + G AL LF EM D +R + T+ S L
Sbjct: 217 DAALAIFERMPWRNIVSWTTMISGY-SQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVL 275
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE-EVN 191
C +L + GRQ+H + +++ + +L MY+KC +A F+ E N
Sbjct: 276 PACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKN 335
Query: 192 LISKNAMVAACCREGEMEMALKTFWR------QPELNDAVSWNTLISGYVQNGDAEEGLK 245
LI+ N M+ A G A+ TF QP D +++ L+SG +G + GLK
Sbjct: 336 LIAWNTMITAYASYGHGLQAVSTFREMIQAGIQP---DDITFTGLLSGCSHSGLVDVGLK 392
Query: 246 LFVRM 250
F M
Sbjct: 393 YFNHM 397
>gi|49387750|dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190136|gb|EEC72563.1| hypothetical protein OsI_05996 [Oryza sativa Indica Group]
Length = 803
Score = 275 bits (702), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 194/688 (28%), Positives = 318/688 (46%), Gaps = 115/688 (16%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L + CH A+K GL N L+ +Y+K + ++ +LF M N S+ ++
Sbjct: 157 LGDGRRCHGVAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGMARPNEVSFTAMM-- 214
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
G + G DAL+LF M + +D
Sbjct: 215 ------------------------------GGLAQTGSIDDALRLFARM--CRSGVPVDP 242
Query: 126 FTVTSTLNLCVKLLNVGF--------GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYE 177
+V+S L C + + G+ +HA +V+ + +SLIDMY+KC +
Sbjct: 243 VSVSSVLGACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMD 302
Query: 178 EACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPE----------------- 220
EA +VFE V ++S N ++ +EG A++ E
Sbjct: 303 EAVKVFES-LPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLASC 361
Query: 221 -----------LNDAVS------WNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
+ D +S WNTL+SGY Q ++ ++LF RM V+ + T A
Sbjct: 362 IKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLA 421
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
LS+C L + +++HS ++ L ++ FV+SG+VD+Y KC
Sbjct: 422 VILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKC---------------- 465
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY-VKAQNCEALFDLLSEF 382
G + AR F+ +TE++VV W ++ SG + + N EA FD +
Sbjct: 466 ---------------GQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEA-FDFFKQ- 508
Query: 383 VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGN 442
+ + G++ ++ +C+ +++ G++IHA +++ G + + S L+DMY+KCGN
Sbjct: 509 MRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGN 568
Query: 443 MTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
M A + F + +++V +N MI YA +G +KA+ LFE ML KPDAVTF+A+L+
Sbjct: 569 MDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTG 628
Query: 503 FRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAV 562
H G V+ +FNSM Y I P +HY C+ID GRA + + + +P ++D +
Sbjct: 629 CSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKDDPI 688
Query: 563 ILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQM- 621
I L C ++ NAEL A E L R++ N + YV L+N+YA+ G + +R M
Sbjct: 689 IWEVLLAACVVHHNAELGKCAAEHLFRIDPKNPSPYVLLSNIYASLGRHGDASAVRALMS 748
Query: 622 -RGMKGNRFAGCSWVYVEHEIHIFTVGD 648
RG+ R G SW+ + + F V D
Sbjct: 749 NRGVVKGR--GYSWIDQKDGVRAFMVAD 774
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 143/576 (24%), Positives = 259/576 (44%), Gaps = 84/576 (14%)
Query: 25 TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPH 84
T N+L+ +YS+ L R + F +P N +S+N +SA ++ DL AR L P
Sbjct: 43 TFLANRLVELYSRAGLPRHALLAFRALPSPNDYSYNAALSAACRAGDLDAARDLLGGMPR 102
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
++ V++N+++ + G +A++++ M++ E + FT+ S L+ C L +G G
Sbjct: 103 RNAVSWNTVISALARSPGDGGEAVEMYGRMRA--EGLLPTHFTLASVLSACGGLAALGDG 160
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
R+ H VK DA+ F ++L+ MY+KC +A R+F G N +S AM+ +
Sbjct: 161 RRCHGVAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGMARP-NEVSFTAMMGGLAQ 219
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFAS 264
G + ++ L+LF RM +GV + + +S
Sbjct: 220 TGSI--------------------------------DDALRLFARMCRSGVPVDPVSVSS 247
Query: 265 ALSAC---CGL-----RNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESM 316
L AC C R + + IH+ V++ G S+ V + ++D+Y KC M+ A +
Sbjct: 248 VLGACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKV 307
Query: 317 LLLKGVRNSFSISSMIVGYSLQGN----------MEE----------------------- 343
S + +I G+ +G+ M+E
Sbjct: 308 FESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLASCIKARDV 367
Query: 344 --ARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGA 401
AR FD ++ +V W L SGY + + + +L + + V D L ++L +
Sbjct: 368 HSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRR-MQHQNVQPDRTTLAVILSS 426
Query: 402 CALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLY 461
C+ L G+++H+ +R + D + S LVDMYSKCG + A IF ERD+V +
Sbjct: 427 CSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCW 486
Query: 462 NVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTA 521
N +I+ H ++A F++M E GI P ++ +++++ S+ G + +
Sbjct: 487 NSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMK 546
Query: 522 DYKISPETDHY--ACMIDLYGRANQLEKAIEFMKSI 555
D + + Y + +ID+Y + ++ A F ++
Sbjct: 547 D---GYDQNVYVGSALIDMYAKCGNMDDARLFFDTM 579
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 128/516 (24%), Positives = 222/516 (43%), Gaps = 118/516 (22%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R+ L +A+ H ++ G N LI +Y+K + E+ K+F+ +P + SWN
Sbjct: 264 RAFRLGQAI--HALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNI 321
Query: 62 IIS-----------------------------------ACIKSHDLKQARSLFDSSPHKD 86
+I+ +CIK+ D+ AR++FD
Sbjct: 322 LITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLASCIKARDVHSARAMFDKISRPS 381
Query: 87 LVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQ 146
+ T+N++L GY E ++ D ++LF MQ ++++ D T+ L+ C KL + FGRQ
Sbjct: 382 VTTWNTLLSGYCQEEQHQ-DTIELFRRMQH--QNVQPDRTTLAVILSSCSKLGILDFGRQ 438
Query: 147 LHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREG 206
+H+ V+ F S L+DMYSKC G
Sbjct: 439 VHSASVRFLLHNDMFVASGLVDMYSKC--------------------------------G 466
Query: 207 EMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASAL 266
++ +A F + E D V WN++ISG + +E F +M ENG+ E ++AS +
Sbjct: 467 QIGIARSIFNKMTE-RDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMI 525
Query: 267 SACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSF 326
++C L ++ ++IH+ V+K+G N +V S ++D+Y KC NM
Sbjct: 526 NSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNM---------------- 569
Query: 327 SISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKE 386
++AR FD++ KN+V W + GY + + +L +T E
Sbjct: 570 ---------------DDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTE 614
Query: 387 GVVTDALILVILLGACALQAALHPG--KEIHAYILRM----GVQMDKKLISTLVDMYSKC 440
DA+ + +L C+ H G + A+ M G+ + + L+D +
Sbjct: 615 -QKPDAVTFIAVLTGCS-----HSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRA 668
Query: 441 GNMTYAE-IIFQNFIERDLVLYNVMI-ACYAHHGHE 474
G E +I + + D +++ V++ AC HH E
Sbjct: 669 GRFVEVEALIHKMPCKDDPIIWEVLLAACVVHHNAE 704
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 188/423 (44%), Gaps = 51/423 (12%)
Query: 161 FAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPE 220
F + L+++YS+ A F N S NA ++A CR G+++ A P
Sbjct: 44 FLANRLVELYSRAGLPRHALLAFRALPSP-NDYSYNAALSAACRAGDLDAARDLLGGMPR 102
Query: 221 LNDAVSWNTLISGYVQN-GDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAK 279
N AVSWNT+IS ++ GD E ++++ RM G+ T AS LSAC GL + +
Sbjct: 103 RN-AVSWNTVISALARSPGDGGEAVEMYGRMRAEGLLPTHFTLASVLSACGGLAALGDGR 161
Query: 280 EIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQG 339
H +K GL +N FV + ++ +Y KC G
Sbjct: 162 RCHGVAVKVGLDANQFVENALLGMYTKC-------------------------------G 190
Query: 340 NMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILL 399
++ +A R F + N V +TA+ G + + + L + + + GV D + + +L
Sbjct: 191 SVGDAVRLFYGMARPNEVSFTAMMGGLAQTGSIDDALRLFAR-MCRSGVPVDPVSVSSVL 249
Query: 400 GACA--------LQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQ 451
GACA + A G+ IHA ++R G D+ + ++L+DMY+KC M A +F+
Sbjct: 250 GACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFE 309
Query: 452 NFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEM 511
+ +V +N++I + G KA+ + M E G +P+ VT+ +L++ V
Sbjct: 310 SLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLASCIKARDVHS 369
Query: 512 GEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIP---TEEDAVILGSFL 568
F+ ++ P + ++ Y + Q + IE + + + D L L
Sbjct: 370 ARAMFDKIS-----RPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVIL 424
Query: 569 NVC 571
+ C
Sbjct: 425 SSC 427
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 149/443 (33%), Positives = 241/443 (54%), Gaps = 7/443 (1%)
Query: 227 WNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVL 286
W +I G+ G E+ L + +M GV N TF+S L C ++ K +HS +
Sbjct: 96 WTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLC----PIEPGKALHSQAV 151
Query: 287 KNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARR 346
K G S+ +V +G++DVY + ++ A+ + ++ S+++M+ Y+ G ++ AR
Sbjct: 152 KLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARV 211
Query: 347 HFDSLTEKNVVVWTALFSGYVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQ 405
FD + E++ V W + GY + EAL +L + K + + ++ +L AC
Sbjct: 212 LFDGMEERDGVCWNVMIDGYTQNGMPNEAL--VLFRRMLKAKAKPNEVTVLSVLSACGQL 269
Query: 406 AALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMI 465
AL G+ +H+YI G+Q + + + LVDMYSKCG++ A ++F ++D+V +N MI
Sbjct: 270 GALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMI 329
Query: 466 ACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKI 525
YA HG ++A+ LF+ M G+ P +TF+ ILSA H G V G FN M +Y I
Sbjct: 330 VGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGI 389
Query: 526 SPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEE 585
P+ +HY CM++L GRA +E+A E +K++ E D V+ G+ L CRL+ L + E
Sbjct: 390 EPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVE 449
Query: 586 KLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFT 645
L+ N Y+ L+N+YAA GNW + R+R M+ + GCS + V +++H F
Sbjct: 450 LLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFL 509
Query: 646 VGDVSHPKTNAIYSVLAIFTGEL 668
G ++HPK IY +L G L
Sbjct: 510 AGGLNHPKRKEIYMMLEEINGWL 532
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 127/513 (24%), Positives = 205/513 (39%), Gaps = 105/513 (20%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
+S + L H + GL I +L Y+ L S LF +VF W
Sbjct: 39 KSKTISHLLQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFW-- 96
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+A I H L+ G AL + +M + + +
Sbjct: 97 --TAIIHGHALR----------------------------GLHEQALNFYAQMLT--QGV 124
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+ FT +S L LC + G+ LH+ VK D+ + + L+D+Y++ A +
Sbjct: 125 EPNAFTFSSILKLC----PIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQ 180
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F+ E+ +L+S AM+ + GE++ A + + E D V WN +I GY QNG
Sbjct: 181 LFDTMPEK-SLVSLTAMLTCYAKHGELDAA-RVLFDGMEERDGVCWNVMIDGYTQNGMPN 238
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E L LF RM + + NE T S LSAC L ++ + +HS++ NG+ N V + +V
Sbjct: 239 EALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALV 298
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D+Y KC G++E+AR FD + +K+VV W +
Sbjct: 299 DMYSKC-------------------------------GSLEDARLVFDKIDDKDVVAWNS 327
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+ GY + L + + G+ + + +L AC + G +I
Sbjct: 328 MIVGYAMHGFSQEALQLFKS-MCRMGLHPTNITFIGILSACGHSGWVTEGWDI------- 379
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
+ + D Y IE + Y M+ GH E+A L
Sbjct: 380 --------FNKMKDEYG---------------IEPKIEHYGCMVNLLGRAGHVEQAYELV 416
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
+ M I+PD V + +L A R G + +GEK
Sbjct: 417 KNM---NIEPDPVLWGTLLGACRLHGKIALGEK 446
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 129/271 (47%), Gaps = 10/271 (3%)
Query: 280 EIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQG 339
+IH+ + ++GL +P ++ + Y ++Y+ ++ + F +++I G++L+G
Sbjct: 48 QIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRG 107
Query: 340 NMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILL 399
E+A + + + V FS +K E L S+ V K G +D + LL
Sbjct: 108 LHEQALNFYAQMLTQGVEPNAFTFSSILKLCPIEPGKALHSQAV-KLGFDSDLYVRTGLL 166
Query: 400 GACALQAALHPGKEIHAYILRMGVQMDKKLIS--TLVDMYSKCGNMTYAEIIFQNFIERD 457
A + +++ +K L+S ++ Y+K G + A ++F ERD
Sbjct: 167 DVYARGGDVVSAQQL------FDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERD 220
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFN 517
V +NVMI Y +G +A++LF ML+ KP+ VT +++LSA G++E G ++ +
Sbjct: 221 GVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESG-RWVH 279
Query: 518 SMTADYKISPETDHYACMIDLYGRANQLEKA 548
S + I ++D+Y + LE A
Sbjct: 280 SYIENNGIQFNVHVGTALVDMYSKCGSLEDA 310
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 10/158 (6%)
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
+IHA + R G+ L L Y+ G + Y+ +F + + +I +A G
Sbjct: 48 QIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRG 107
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
E+A+ + +ML +G++P+A TF +IL + C +E G+ + K+ ++D Y
Sbjct: 108 LHEQALNFYAQMLTQGVEPNAFTFSSIL---KLC-PIEPGKALHSQAV---KLGFDSDLY 160
Query: 533 --ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFL 568
++D+Y R + A + ++P E+ V L + L
Sbjct: 161 VRTGLLDVYARGGDVVSAQQLFDTMP-EKSLVSLTAML 197
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 179/660 (27%), Positives = 303/660 (45%), Gaps = 101/660 (15%)
Query: 11 ICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSH 70
+ H QA+ G + + ++ +Y K + ++RK+FD MPE++ WNT+IS
Sbjct: 140 VIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMIS------ 193
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
GY E Y +++++F ++ + + R+D T+
Sbjct: 194 -------------------------GYRKNEMY-VESIQVFRDLIN-ESCTRLDTTTLLD 226
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L +L + G Q+H+ KT + + ++ I +YSKC
Sbjct: 227 ILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKC----------------- 269
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
K M +A RE +R+P D V++N +I GY NG+ E L LF +
Sbjct: 270 ---GKIKMGSALFRE----------FRKP---DIVAYNAMIHGYTSNGETELSLSLFKEL 313
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
+G R T S + L + IH + LK+ +S+ VS+ + VY K
Sbjct: 314 MLSGARLRSSTLVSLVPVSGHLMLIYA---IHGYCLKSNFLSHASVSTALTTVYSKL--- 367
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
+E AR+ FD EK++ W A+ SGY +
Sbjct: 368 ----------------------------NEIESARKLFDESPEKSLPSWNAMISGYTQNG 399
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
E L E + K + + + +L ACA AL GK +H + + +
Sbjct: 400 LTEDAISLFRE-MQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVS 458
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+ L+ MY+KCG++ A +F +++ V +N MI+ Y HG ++A+ +F EML GI
Sbjct: 459 TALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGIT 518
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
P VTF+ +L A H G V+ G++ FNSM Y P HYACM+D+ GRA L++A++
Sbjct: 519 PTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQ 578
Query: 551 FMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGN 610
F++++ E + + + L CR++++ LA EKL L+ +N +V L+N+++A+ N
Sbjct: 579 FIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRN 638
Query: 611 WAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYE 670
+ + +R+ + K + G + + + H+FT GD SHP+ IY L G++ E
Sbjct: 639 YPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMRE 698
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 86/200 (43%), Gaps = 2/200 (1%)
Query: 315 SMLLLKGVRNSFSI-SSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE 373
+ ++L G RN S+ + + S G + AR F S+ +V ++ L G+ ++
Sbjct: 41 AQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPH 100
Query: 374 ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL 433
+ + + + ++ + A + G+ IH + G + L S +
Sbjct: 101 SSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNI 160
Query: 434 VDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML-EKGIKPD 492
V MY K + A +F E+D +L+N MI+ Y + ++I +F +++ E + D
Sbjct: 161 VKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLD 220
Query: 493 AVTFVAILSAFRHCGSVEMG 512
T + IL A + +G
Sbjct: 221 TTTLLDILPAVAELQELRLG 240
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 80/168 (47%), Gaps = 13/168 (7%)
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
+ HA I+ G + D L++ L S G + YA IF + D+ L+NV++ ++ +
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 473 HEEKAILLFEEMLEK-GIKPDAVTFVAILSA---FR--HCGSVEMGEKYFNSMTADYKIS 526
++ +F + + +KP++ T+ +SA FR G V G+ + ++ +
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLG 157
Query: 527 PETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLN 574
+ ++ +Y + ++E A + +P E+D ++ + ++ R N
Sbjct: 158 ------SNIVKMYFKFWRVEDARKVFDRMP-EKDTILWNTMISGYRKN 198
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 175/599 (29%), Positives = 287/599 (47%), Gaps = 68/599 (11%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
+VF+ +++ A ++ + +A +FD +D+ +N+ML G A+A+ LF M
Sbjct: 102 SVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCR-NARAAEAVGLFGRM 160
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
E + D TV+S L +CV L + +H + VK D F ++LID+Y K
Sbjct: 161 --VGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLG 218
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
EEA VF G E D V+WN++ISG
Sbjct: 219 MLEEAQCVFHGM---------------------------------ECRDLVTWNSIISGC 245
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL-ISN 293
Q G LK+F M +GV + T S SA + + AK +H +V++ G + +
Sbjct: 246 EQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDD 305
Query: 294 PFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
+ IVD+Y K N+ A+ M V++S S +++I GY G EA + +
Sbjct: 306 IIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHM-- 363
Query: 354 KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
Q E L + FV+ +L A + AL G
Sbjct: 364 ----------------QKHEGLKAIQGTFVS-------------VLPAYSHLGALQQGMR 394
Query: 414 IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH 473
+HA +++G+ +D + + L+D+Y+KCG + A ++F+ R +N +I+ HGH
Sbjct: 395 MHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGH 454
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA 533
+A+ LF M ++GIKPD VTFV++L+A H G V+ G +F+ M Y I P HYA
Sbjct: 455 GAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYA 514
Query: 534 CMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGN 593
CM D+ GRA QL++A F++++P + D+ + G+ L CR++ N E+ A + L L+
Sbjct: 515 CMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPE 574
Query: 594 NKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
N YV ++N+YA G W + +R +R + G S + V+ +++F G+ + P
Sbjct: 575 NVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQTEP 633
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 135/553 (24%), Positives = 222/553 (40%), Gaps = 154/553 (27%)
Query: 9 ALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIK 68
AL+ HV A+K GL N LI +Y K +L E++ +F M R++ +WN+IIS C
Sbjct: 188 ALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGC-- 245
Query: 69 SHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
G A ALK+F M+ + + D T+
Sbjct: 246 ------------------------------EQRGQTAAALKMFQGMRGSG--VSPDVLTL 273
Query: 129 TSTLNLCVKLLNVGFGR---QLHAFMVKTSNDASG-FAVSSLIDMYSKCRCYEEACRVFE 184
S L + G GR LH ++++ D A ++++DMY+K E A R+F+
Sbjct: 274 VS---LASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFD 330
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
+ D+VSWNTLI+GY+QNG A E +
Sbjct: 331 SMP---------------------------------VQDSVSWNTLITGYMQNGLANEAV 357
Query: 245 KLFVRMGEN-GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
+ + M ++ G++ + TF S L A L ++ +H+ +K GL + +V + ++D+
Sbjct: 358 ERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDL 417
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y KC + AE+MLL F+ + ++ W A+
Sbjct: 418 YAKCGKL--AEAMLL-----------------------------FEKMPRRSTGPWNAII 446
Query: 364 SGY-VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
SG V EAL L + +EG+ D + V LL AC+ + G+ ++ M
Sbjct: 447 SGLGVHGHGAEAL--TLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGR---SFFDVMQ 501
Query: 423 VQMD----KKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
V D K + + DM + G + A QN
Sbjct: 502 VTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNM------------------------- 536
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE-TDHYACMID 537
IKPD+ + A+L A R G+VEMG+ ++ +++ PE +Y M +
Sbjct: 537 ---------PIKPDSAVWGALLGACRIHGNVEMGKVASQNL---FELDPENVGYYVLMSN 584
Query: 538 LYGRANQLEKAIE 550
+Y + + + E
Sbjct: 585 MYAKVGKWDGVDE 597
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 80/208 (38%), Gaps = 37/208 (17%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L++ + H +IK GL + LI +Y+K L E+ LF++MP R+ WN IIS
Sbjct: 389 LQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISG 448
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
+ G+ A+AL LF MQ E I+ D
Sbjct: 449 --------------------------------LGVHGHGAEALTLFSRMQ--QEGIKPDH 474
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFA--VSSLIDMYSKCRCYEEACRVF 183
T S L C V GR M + + D A + + DM + +EA
Sbjct: 475 VTFVSLLAACSHAGLVDQGRSFFDVM-QVTYDIVPIAKHYACMADMLGRAGQLDEAFNFI 533
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMA 211
+ + + A++ AC G +EM
Sbjct: 534 QNMPIKPDSAVWGALLGACRIHGNVEMG 561
>gi|147804706|emb|CAN64870.1| hypothetical protein VITISV_041329 [Vitis vinifera]
Length = 629
Score = 275 bits (702), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 169/610 (27%), Positives = 298/610 (48%), Gaps = 79/610 (12%)
Query: 67 IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEF 126
+ S+ LK + D + ++ +N+++ G+I G+ + + + +M+ +E + D+F
Sbjct: 86 LPSNTLKAGEN--DPTHEINVFAFNAIISGFIT-NGFPEEGFEFYQKMR--NEGVMPDKF 140
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
T + C+ +L + +++H + K + F S+L++ Y K E A FE
Sbjct: 141 TFPCAIKACLDVLEI---KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFE-- 195
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
E+ ++ D V WN +++GY Q G E L+
Sbjct: 196 ----------------------ELPIR---------DVVLWNAMVNGYAQIGQFEMVLET 224
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
F RM + V + T LS + ++ + IH + +K G S VS+ ++D+Y K
Sbjct: 225 FRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGK 284
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
C+ + E+A F+ + EK++ W ++ S +
Sbjct: 285 CKCI-------------------------------EDALEIFEMMREKDIFSWNSIVSVH 313
Query: 367 VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMD 426
+ + + LL + G+ D + + +L AC+ AAL G+EIH Y++ G+ D
Sbjct: 314 EQCGDHDGTLRLLDRMLGA-GIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKD 372
Query: 427 KK------LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
K L + ++DMY+KCG+M A ++F+ +D+ +N+MI Y HG+ +A+ +
Sbjct: 373 GKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEM 432
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
F M E +KPD VTFV +LSA H G V G + M + Y ++P +HY C+ID+ G
Sbjct: 433 FSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLG 492
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQ 600
RA QL++A E ++P E + V+ + L CRL+++A LA A +++ LE + YV
Sbjct: 493 RAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVL 552
Query: 601 LANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSV 660
++NVY A G + E+ +R MR + GCSW+ +++ +H+F D +HP+ +IY+
Sbjct: 553 MSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAXSIYAG 612
Query: 661 LAIFTGELYE 670
L T L E
Sbjct: 613 LNSLTARLXE 622
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 118/471 (25%), Positives = 205/471 (43%), Gaps = 104/471 (22%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
E +VF + +++ +K ++ A+ F+ P +D+V +N+M+ GY +E L+ F
Sbjct: 168 ELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEM-VLETFR 226
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVS-SLIDMYS 171
M DE + FTVT L++ + ++ GR +H F +K D SG AVS SLIDMY
Sbjct: 227 RMN--DESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYD-SGVAVSNSLIDMYG 283
Query: 172 KCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLI 231
KC+C E+A +FE E+ D SWN+++
Sbjct: 284 KCKCIEDALEIFEMMREK---------------------------------DIFSWNSIV 310
Query: 232 SGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL- 290
S + Q GD + L+L RM G++ + T + L AC L + +EIH +++ +GL
Sbjct: 311 SVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLG 370
Query: 291 -----ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEAR 345
I + + + ++D+Y KC G+M +A
Sbjct: 371 KDGKDIDDVLLKNAVIDMYAKC-------------------------------GSMRDAH 399
Query: 346 RHFDSLTEKNVVVWTALFSGY-VKAQNCEAL--FDLLSEFVTKEGVVTDALILVILLGAC 402
F+ ++ K+V W + GY + EAL F + E K D + V +L AC
Sbjct: 400 LVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLK----PDEVTFVGVLSAC 455
Query: 403 ALQAALHPGKEIHAYILRMGVQMDKKLI----STLVDMYSKCGNMTYA-EIIFQNFIERD 457
+ + G+ ++++M + D + ++DM + G + A E+ IE +
Sbjct: 456 SHAGFVSQGRN---FLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEAN 512
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGS 508
V++ ++A H H A + + + E ++P+ HCGS
Sbjct: 513 PVVWRALLAACRLHKHAVLAEVAAQRVFE--LEPE------------HCGS 549
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 114/271 (42%), Gaps = 73/271 (26%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L I H A+K G +N LI +Y K + ++ ++F+ M E+++FSWN+I+S
Sbjct: 252 DLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVS 311
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
H+ CG + +G L+L M A I+ D
Sbjct: 312 V------------------HEQ--------CG--DHDG----TLRLLDRMLGAG--IQPD 337
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV------SSLIDMYSKCRCYEE 178
TVT+ L C L + GR++H +M+ + G + +++IDMY+KC +
Sbjct: 338 LVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRD 397
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
A VFE + + D SWN +I GY +G
Sbjct: 398 AHLVFERMSNK---------------------------------DVASWNIMIMGYGMHG 424
Query: 239 DAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
E L++F RM E ++ +E TF LSAC
Sbjct: 425 YGNEALEMFSRMCEVQLKPDEVTFVGVLSAC 455
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 89/206 (43%), Gaps = 15/206 (7%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
M ++ L+ + A L + + IH Y + L + K D+ V N
Sbjct: 329 MLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDD-----VLLKN 383
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
+I K ++ A +F+ +KD+ ++N M+ GY GY +AL++F M +
Sbjct: 384 AVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGY-GMHGYGNEALEMFSRM--CEVQ 440
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMV--KTSNDASGFA--VSSLIDMYSKCRCY 176
++ DE T L+ C + GF Q F+V K+ D + + +IDM +
Sbjct: 441 LKPDEVTFVGVLSACS---HAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQL 497
Query: 177 EEACRVFEGCTEEVNLISKNAMVAAC 202
+EA + E N + A++AAC
Sbjct: 498 DEAYELALTMPIEANPVVWRALLAAC 523
>gi|226528958|ref|NP_001141436.1| uncharacterized protein LOC100273546 [Zea mays]
gi|194704572|gb|ACF86370.1| unknown [Zea mays]
gi|414877969|tpg|DAA55100.1| TPA: hypothetical protein ZEAMMB73_905907 [Zea mays]
Length = 700
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 203/650 (31%), Positives = 311/650 (47%), Gaps = 73/650 (11%)
Query: 25 TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP- 83
T++ N +I S H + ++R LFD MP R+ FSW ++S + DL+ AR + D P
Sbjct: 80 TVSWNAMIAALSDHGRVADARSLFDRMPVRDEFSWTVMVSCYARGGDLELARDVLDRMPG 139
Query: 84 HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLN-VG 142
K YN+M+ GY G DA+KL EM + D + + + L +++ V
Sbjct: 140 DKCTACYNAMISGYAK-NGRFDDAMKLLREMPAPD---LVSWNSALAGLTQSGEMVRAVQ 195
Query: 143 FGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAAC 202
F ++ M + +GF + ++ A F E N+IS ++
Sbjct: 196 FFDEMVKDMTSWNLMLAGFVRTGDLN----------AASSFFAKIESPNVISWVTLLNGY 245
Query: 203 CREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG-ENGVRWNEHT 261
CR G + A F R PE N V+WN ++ GYV EE KLF M +N + W T
Sbjct: 246 CRAGRIADARDLFDRMPERN-VVAWNVMLDGYVHLSPIEEACKLFDEMPIKNSISWT--T 302
Query: 262 FASALSACCGLRNVK-----------CAK-----------------------EIHSWVLK 287
S L+ L+ K AK E+H V
Sbjct: 303 IISGLARAGKLQEAKDLLDKMSFNCVAAKTALMHGYLQRNMADDARRIFDGMEVHDTVCW 362
Query: 288 NGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSIS--SMIVGYSLQGNMEEAR 345
N +IS +V GI++ E+MLL + + N +S +MI GY+ G M +A
Sbjct: 363 NTMISG-YVQCGILE-----------EAMLLFQRMPNKDMVSWNTMIAGYAQDGQMHKAI 410
Query: 346 RHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF-VTKEGV-VTDALILVILLGACA 403
F + +N V W ++ SG+V QN + D L F + + G D L ACA
Sbjct: 411 GIFRRMNRRNTVSWNSVISGFV--QN-DRFVDALHHFMLMRRGTNRADWSTYASCLRACA 467
Query: 404 LQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNV 463
A LH G+++H ++R G D + L+ Y+KCG + A+ IF + +D+V +N
Sbjct: 468 NLAVLHVGRQLHNLLVRSGHINDSFAGNALISTYAKCGRILEAKQIFDEMVYKDIVSWNA 527
Query: 464 MIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADY 523
+I YA +G +AI +F EM G++PD VTFV ILSA H G ++ G +F SMT +Y
Sbjct: 528 LIDGYASNGQGTEAIAVFREMEANGVRPDEVTFVGILSACSHAGLIDEGLFFFYSMTKEY 587
Query: 524 KISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEA 583
+ P +HYACM+DL GRA +L +A E ++ + + +A + G+ L C +++N ELA A
Sbjct: 588 LLKPVAEHYACMVDLLGRAGKLNEAFELVQGMQIQPNAGVWGALLGACHMHKNHELAQLA 647
Query: 584 EEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCS 633
E+L LE + YV L+N+ A G W E + R ++ N+ G +
Sbjct: 648 AERLSELEPRKASNYVLLSNISAEAGKWDESEKARASIKEKGVNKPPGLA 697
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 113/452 (25%), Positives = 194/452 (42%), Gaps = 44/452 (9%)
Query: 57 FSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQS 116
F N ++ +S L AR LFD+ P ++ VTYN+ML + G +A LF M
Sbjct: 19 FRSNKELTRLARSGQLAAARRLFDAMPLRNTVTYNAMLSA-LARHGRIDEARALFDGMPG 77
Query: 117 ADEHIRMDEFTVTSTLNLCVKLLN----VGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
+ T + N + L+ V R L M F+ + ++ Y++
Sbjct: 78 RN----------TVSWNAMIAALSDHGRVADARSLFDRMPVRDE----FSWTVMVSCYAR 123
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
E A V + + NAM++ + G + A+K P D VSWN+ ++
Sbjct: 124 GGDLELARDVLDRMPGDKCTACYNAMISGYAKNGRFDDAMKLLREMPA-PDLVSWNSALA 182
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
G Q+G+ ++ F M ++ WN L+ ++ A + + +IS
Sbjct: 183 GLTQSGEMVRAVQFFDEMVKDMTSWN-----LMLAGFVRTGDLNAASSFFAKIESPNVIS 237
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
+V+ +++ YC+ + A + RN + + M+ GY +EEA + FD +
Sbjct: 238 --WVT--LLNGYCRAGRIADARDLFDRMPERNVVAWNVMLDGYVHLSPIEEACKLFDEMP 293
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQA-ALHPG 411
KN + WT + SG +A + DLL + AL+ L A A + G
Sbjct: 294 IKNSISWTTIISGLARAGKLQEAKDLLDKMSFNCVAAKTALMHGYLQRNMADDARRIFDG 353
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
E+H D +T++ Y +CG + A ++FQ +D+V +N MIA YA
Sbjct: 354 MEVH----------DTVCWNTMISGYVQCGILEEAMLLFQRMPNKDMVSWNTMIAGYAQD 403
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAF 503
G KAI +F M + + V++ +++S F
Sbjct: 404 GQMHKAIGIFRRMNRR----NTVSWNSVISGF 431
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 187/617 (30%), Positives = 295/617 (47%), Gaps = 71/617 (11%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N +I+ K + A +F +KD VT+NSM+ G + + +A+K F EM+ +
Sbjct: 428 NGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQF-LEAVKTFQEMRRTE- 485
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
+ FT+ S L+ C L + G QLH +K D ++L+ +Y +C +E
Sbjct: 486 -LYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKEC 544
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
+ F + D VSWN+LI +
Sbjct: 545 QKAFSLMLDY---------------------------------DHVSWNSLIGALADSEP 571
Query: 240 AE-EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
+ E ++ F+ M G N TF + L+A L + K+IH+ VLK + ++ + +
Sbjct: 572 SMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIEN 631
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
++ Y KC +M Y E N FS S ++ V
Sbjct: 632 ALLACYGKCGDMGYCE---------NIFSRMS---------------------DRQDEVS 661
Query: 359 WTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
W ++ SGY+ + D++ F+ ++G D +L ACA A L G E+H
Sbjct: 662 WNSMISGYIHNELLPKAMDMV-WFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCS 720
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
+R ++ D + S LVDMY+KCG + YA F+ R+L +N MI+ YA HGH K++
Sbjct: 721 VRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSL 780
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
LF +M +G PD VTFV +LSA H G V G +F+SM+ Y ++P +H++CM+DL
Sbjct: 781 DLFAQMKLQGPLPDHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDL 840
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLNV-CRLN-RNAELAGEAEEKLLRLEGNNKA 596
GR +L K +F+ +P + + +I + L CR N RN L A E LL +E N
Sbjct: 841 LGRVGELNKMEDFLNQMPVKPNVLIWRTVLGACCRANGRNTALGRRAAEMLLEMEPTNAV 900
Query: 597 RYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNA 656
Y+ L+N+YA+ G W ++ + R MR + AGCSWV ++ +H+F GD SHP+ +
Sbjct: 901 NYILLSNMYASGGKWDDVAKTRVAMRKAFVKKEAGCSWVTMKDGVHVFVAGDKSHPEKDL 960
Query: 657 IYSVLAIFTGELYEIAG 673
IY L G++ +AG
Sbjct: 961 IYEKLKELNGKM-RLAG 976
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 132/524 (25%), Positives = 217/524 (41%), Gaps = 118/524 (22%)
Query: 7 KEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISAC 66
K+A H+Q K G N LI+IY++ L RK+FDEMP RN+ SW+ +IS
Sbjct: 90 KDAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISG- 148
Query: 67 IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEF 126
T N M +A +LF +M S + + +
Sbjct: 149 ---------------------YTRNRM----------PNEACELFRKMVS--DGFMPNHY 175
Query: 127 TVTSTLNLCVKLLNVG--FGRQLHAFMVKTS--NDASGFAVSSLIDMYSKC-RCYEEACR 181
S + C + G FG Q+H M KT ND + A + LI MY + A R
Sbjct: 176 AFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVT--ASNVLISMYGNALGMVDYARR 233
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
F+ NL+S N+M++ C Q GDA
Sbjct: 234 AFDSIWPR-NLVSLNSMISVYC--------------------------------QRGDAV 260
Query: 242 EGLKLFVRMGE----NGVRWNEHTFASALSACCGLRN--VKCAKEIHSWVLKNGLISNPF 295
+F M + +G++ NE+TF S +SA C L N + +++ + V K+G + + +
Sbjct: 261 SAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLY 320
Query: 296 VSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKN 355
V S +V + K ++ YA+++ RN S++ +I+G Q EEA F +
Sbjct: 321 VGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEM---- 376
Query: 356 VVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACA----LQAALHPG 411
K+ V + +I+L A L+ G
Sbjct: 377 -----------------------------KDSVELNPNSYMIILTAFPEFHVLENGKRKG 407
Query: 412 KEIHAYILRMGVQMDKKLIST-LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
E+HA+++R G+ + I L++MY+KCG + A ++F+ +D V +N MI
Sbjct: 408 SEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQ 467
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
+ +A+ F+EM + P T ++ LS+ G + +GE+
Sbjct: 468 NKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQ 511
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 112/503 (22%), Positives = 216/503 (42%), Gaps = 74/503 (14%)
Query: 75 ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQS--ADEHIRMDEFTVTSTL 132
AR FDS ++LV+ NSM+ Y G A +F MQ + ++ +E+T S +
Sbjct: 231 ARRAFDSIWPRNLVSLNSMISVYCQ-RGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLI 289
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ L N G L + + + SGF L D+Y
Sbjct: 290 SATCSLANSGL-VLLEQLLTRV--EKSGF----LHDLYVG-------------------- 322
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+A+V+ + G + A K +++ + VS N LI G V+ EE ++LF+ M +
Sbjct: 323 ---SALVSGFAKAGSIGYA-KNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEM-K 377
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAK----EIHSWVLKNGLISNPF-VSSGIVDVYCKC 307
+ V N +++ L+A ++ K E+H++++++GL++ + +G++++Y KC
Sbjct: 378 DSVELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKC 437
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
+N A + L ++S + +SMI G EA + F + T L+
Sbjct: 438 GAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRR------TELYP--- 488
Query: 368 KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDK 427
S F ++ L +CA + G+++H L++G+ +D
Sbjct: 489 ------------SNFT-----------MISALSSCASLGWISVGEQLHCEGLKLGLDLDV 525
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEE-KAILLFEEMLE 486
+ + L+ +Y +CG + + F ++ D V +N +I A +A+ F M+
Sbjct: 526 SVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMR 585
Query: 487 KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLE 546
G P+ VTF+ IL+A E+G K +++ ++ +T ++ YG+ +
Sbjct: 586 AGWDPNRVTFITILAAVSSLSLHELG-KQIHALVLKRNVAADTAIENALLACYGKCGDMG 644
Query: 547 KAIEFMKSIPTEEDAVILGSFLN 569
+ +D V S ++
Sbjct: 645 YCENIFSRMSDRQDEVSWNSMIS 667
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 116/253 (45%), Gaps = 12/253 (4%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACI 67
EA+ + ++AG +T ++ S +L +++ + +RNV + I +A +
Sbjct: 575 EAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIENALL 634
Query: 68 ----KSHDLKQARSLFDS-SPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
K D+ ++F S +D V++NSM+ GYI+ E ++ MQ R
Sbjct: 635 ACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQ---R 691
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
+D FT + L+ C + + G ++H V+ ++ S+L+DMY+KC + A R
Sbjct: 692 LDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRF 751
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWR---QPELNDAVSWNTLISGYVQNGD 239
FE NL S N+M++ R G +L F + Q L D V++ ++S G
Sbjct: 752 FEMMPAR-NLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHAGL 810
Query: 240 AEEGLKLFVRMGE 252
EG F M E
Sbjct: 811 VNEGFSHFDSMSE 823
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 67/134 (50%), Gaps = 5/134 (3%)
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
+E+H + + G D L +TL+++Y++ G++ +F R+LV ++ +I+ Y +
Sbjct: 93 EELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRN 152
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKY---FNSMTADYKISPE 528
+A LF +M+ G P+ F +++ A + CG E G K+ + + + + +
Sbjct: 153 RMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECG--EYGLKFGMQIHGLMSKTQYVND 210
Query: 529 TDHYACMIDLYGRA 542
+I +YG A
Sbjct: 211 VTASNVLISMYGNA 224
>gi|242045336|ref|XP_002460539.1| hypothetical protein SORBIDRAFT_02g030160 [Sorghum bicolor]
gi|241923916|gb|EER97060.1| hypothetical protein SORBIDRAFT_02g030160 [Sorghum bicolor]
Length = 630
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 180/626 (28%), Positives = 319/626 (50%), Gaps = 19/626 (3%)
Query: 52 PERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLF 111
P + + + I++ ++ D AR++FD+ P +D V +N+ML Y A G DAL LF
Sbjct: 7 PFAGLVAATSRIASLGRAGDAASARAVFDAMPRRDAVAWNAMLTAYARA-GQPRDALALF 65
Query: 112 IEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYS 171
+ D F++T+ L+ L + G QLHA +++ A +SLI MY+
Sbjct: 66 SRAPAPDA------FSLTAALSAAAALRSPTAGAQLHARLLRVGLRALLPVGNSLISMYA 119
Query: 172 KCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLI 231
KC E+A R F G E N +S +++ A ++ +A + F P N+ V+WNTL+
Sbjct: 120 KCARAEDAARAF-GEMRERNALSWCSLLDAYVASDDLRLAQELFDEMPNRNN-VAWNTLL 177
Query: 232 SGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI 291
GY ++G+A L LF +M G+ ++ T + AC L N IH V+++G
Sbjct: 178 MGYSRSGNANHCLLLFNKMRMAGLTCDDATLCILVDACTELANPSAGSAIHKIVVQSGWN 237
Query: 292 SNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL 351
+ VS+ ++ +Y K ++ A + V+ S +S+I Y G +E+A F S+
Sbjct: 238 AMAEVSNSLISLYTKFSLLDDAVRIFESMEVQTIVSWNSLIDAYMKLGCVEKATSLFGSV 297
Query: 352 TEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG 411
E NV+ WTA+ G + + L E + E + D +L ACA A+L G
Sbjct: 298 PETNVISWTAMIGGLARNGLADEALILFVEMLAHEHIHPDDFTFGAVLHACATAASLASG 357
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
+ +H + + G + ++L+DMY+KCG++ +F + +DLV +N M+ +A +
Sbjct: 358 RMVHCRVFQSGFVSYLYVANSLIDMYAKCGDLEGGTNVFSTIVNKDLVSWNTMLFGFAIN 417
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH 531
G +A+++++ M + PD VTF +L+A H G +E G+ +F M + + I P+ +H
Sbjct: 418 GLPNEALVVYDSMKSHDVCPDEVTFTGLLTACSHSGLLEHGKTFFELMVSVHGIQPKPEH 477
Query: 532 YACMIDLYGRANQLEKAIEFM---KSIPTEEDAVILGSFLNVCRLNR-NAELAGEAEEKL 587
+C++D+Y R+ + KA+E + + ++ I + L+ C L N +A +A + +
Sbjct: 478 LSCILDMYARSGNITKAMEMLDRYSEMIQTHNSDIREALLSACSLEHLNFSVARKAVKDM 537
Query: 588 LRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVG 647
+ + YV L+N++ A G W + R+R M + GCSW+ V+ + +F G
Sbjct: 538 VATKSAGDVGYVMLSNLFCATGQWNQAERVRIAMAEYGIKKSPGCSWIEVQGAVKVFVSG 597
Query: 648 --DVSHPKTNAIYSVLAIFTGELYEI 671
D+ H + V+++ GE+ +I
Sbjct: 598 AQDLDHSG----WDVISLLDGEMRDI 619
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 218/446 (48%), Gaps = 41/446 (9%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + ++ GL N LI +Y+K ++ + F EM ERN SW +++ A + S DL
Sbjct: 96 HARLLRVGLRALLPVGNSLISMYAKCARAEDAARAFGEMRERNALSWCSLLDAYVASDDL 155
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+ A+ LFD P+++ V +N++L GY + G L LF +M+ A + D+ T+ +
Sbjct: 156 RLAQELFDEMPNRNNVAWNTLLMGY-SRSGNANHCLLLFNKMRMAG--LTCDDATLCILV 212
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C +L N G +H +V++ +A +SLI +Y+K ++A R+FE E +
Sbjct: 213 DACTELANPSAGSAIHKIVVQSGWNAMAEVSNSLISLYTKFSLLDDAVRIFES-MEVQTI 271
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM-G 251
+S N+++ A + G +E A F PE N +SW +I G +NG A+E L LFV M
Sbjct: 272 VSWNSLIDAYMKLGCVEKATSLFGSVPETN-VISWTAMIGGLARNGLADEALILFVEMLA 330
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
+ ++ TF + L AC ++ + +H V ++G +S +V++ ++D+Y KC
Sbjct: 331 HEHIHPDDFTFGAVLHACATAASLASGRMVHCRVFQSGFVSYLYVANSLIDMYAKC---- 386
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW-TALFSGYVKAQ 370
G++E F ++ K++V W T LF +
Sbjct: 387 ---------------------------GDLEGGTNVFSTIVNKDLVSWNTMLFGFAINGL 419
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM-GVQMDKKL 429
EAL ++ + + V D + LL AC+ L GK ++ + G+Q +
Sbjct: 420 PNEAL--VVYDSMKSHDVCPDEVTFTGLLTACSHSGLLEHGKTFFELMVSVHGIQPKPEH 477
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIE 455
+S ++DMY++ GN+T A + + E
Sbjct: 478 LSCILDMYARSGNITKAMEMLDRYSE 503
>gi|357118286|ref|XP_003560887.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Brachypodium distachyon]
Length = 676
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 180/646 (27%), Positives = 312/646 (48%), Gaps = 77/646 (11%)
Query: 26 ITTNQLIHIYSKH---NLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSS 82
++ N L+ YS+ L +R+LFDEMP+R+ +WNT++ A ++ + +A LFD
Sbjct: 93 VSWNTLLAAYSRSLNSEHLAAARRLFDEMPQRDAVTWNTLLGAYVRRGLMVEAEKLFDEM 152
Query: 83 PHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVG 142
P +++ ++N+M+ G+ +A G AL +F M D S L + G
Sbjct: 153 PQRNVASWNTMVTGFFSA-GQVNKALDMFDAMPVKDS---------ASLGTLVSGFIKNG 202
Query: 143 FGRQLHAFMVK----TSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAM 198
+ + K T D + A ++LI Y + +A R+F+ +I +
Sbjct: 203 RLHEAEELLTKRLRVTDMDEAVDAYNTLIAAYGQVGRVSDARRLFD-------MIPRGQY 255
Query: 199 VAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWN 258
C+ M + F R + VSWN++++ Y++ GD ++F M +
Sbjct: 256 ---QCKTNNM----RVFAR-----NVVSWNSMMTCYIRTGDVCSAREIFNEMPD------ 297
Query: 259 EHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLL 318
K++ SW N +I+ Y K +M AE +
Sbjct: 298 --------------------KDLVSW---NTMIAG----------YTKVSDMEEAEKLFW 324
Query: 319 LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDL 378
+ S + +I G++ +G++E AR FD + E+ + W + SGY + + + +L
Sbjct: 325 EMPDPDIVSWNLIIRGFTQKGDVEHARGFFDRMPERGTISWNTMISGYEQNGHYDGAIEL 384
Query: 379 LSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYS 438
++ + + G D +L ACA L G ++H I + + D + L+ MYS
Sbjct: 385 FTKML-EAGGTPDRHTFSSVLAACASLPMLRLGAQLHQLIEKSFLP-DTATSNALMTMYS 442
Query: 439 KCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVA 498
+ G +T AE IF+ ++DLV +N +I Y HHG +A+ LFE+M + P +TF++
Sbjct: 443 RGGALTDAEAIFKQMPQKDLVSWNALIGGYEHHGCATEALQLFEDMRSARVMPTHITFIS 502
Query: 499 ILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE 558
+LSA + G V G F++M +Y I+ +HYA +++L GR QL+ A+E + S+P
Sbjct: 503 LLSACGNAGLVSEGWMVFDTMIHEYSIAARIEHYAALVNLIGRHGQLDDALEVINSMPIA 562
Query: 559 EDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIR 618
D + G+FL C +N LA A + L +++ + A YV + N++A EG W +R
Sbjct: 563 PDRSVWGAFLGACTAKKNELLAHMAAKALSKIDPESSAPYVLIHNLHAHEGRWGSASVVR 622
Query: 619 KQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIF 664
++M ++ G SW+ + ++H+F GD SHP T I+SVL F
Sbjct: 623 EEMEQQGIHKHPGYSWIDLHDKVHVFISGDTSHPLTQEIFSVLKCF 668
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 101/437 (23%), Positives = 176/437 (40%), Gaps = 105/437 (24%)
Query: 24 TTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA---CIKSHDLKQARSLFD 80
+ +T N + ++ + +R F MP R+ SWNT+++A + S L AR LFD
Sbjct: 60 SVVTWNSFLAALARGRDVAAARAFFASMPVRDAVSWNTLLAAYSRSLNSEHLAAARRLFD 119
Query: 81 SSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQS---ADEHIRMDEFTVTSTLNLCVK 137
P +D VT+N++L Y+ G +A KLF EM A + + F +N +
Sbjct: 120 EMPQRDAVTWNTLLGAYVR-RGLMVEAEKLFDEMPQRNVASWNTMVTGFFSAGQVNKALD 178
Query: 138 LLNV--------------GF---GR--QLHAFMVK----TSNDASGFAVSSLIDMYSKCR 174
+ + GF GR + + K T D + A ++LI Y +
Sbjct: 179 MFDAMPVKDSASLGTLVSGFIKNGRLHEAEELLTKRLRVTDMDEAVDAYNTLIAAYGQVG 238
Query: 175 CYEEACRVFEGCTE-------------EVNLISKNAMVAACCREG--------------- 206
+A R+F+ N++S N+M+ R G
Sbjct: 239 RVSDARRLFDMIPRGQYQCKTNNMRVFARNVVSWNSMMTCYIRTGDVCSAREIFNEMPDK 298
Query: 207 ----------------EMEMALKTFWRQPELN---------------------------- 222
+ME A K FW P+ +
Sbjct: 299 DLVSWNTMIAGYTKVSDMEEAEKLFWEMPDPDIVSWNLIIRGFTQKGDVEHARGFFDRMP 358
Query: 223 --DAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKE 280
+SWNT+ISGY QNG + ++LF +M E G + HTF+S L+AC L ++ +
Sbjct: 359 ERGTISWNTMISGYEQNGHYDGAIELFTKMLEAGGTPDRHTFSSVLAACASLPMLRLGAQ 418
Query: 281 IHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGN 340
+H +++ + + S+ ++ +Y + + AE++ ++ S +++I GY G
Sbjct: 419 LHQ-LIEKSFLPDTATSNALMTMYSRGGALTDAEAIFKQMPQKDLVSWNALIGGYEHHGC 477
Query: 341 MEEARRHFDSLTEKNVV 357
EA + F+ + V+
Sbjct: 478 ATEALQLFEDMRSARVM 494
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 85/211 (40%), Gaps = 14/211 (6%)
Query: 348 FDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVI--LLGACALQ 405
FD+L ++VV W + + + ++ A + ++ V + L+ L + L
Sbjct: 53 FDALPARSVVTWNSFLAALARGRDVAAARAFFASMPVRDAVSWNTLLAAYSRSLNSEHLA 112
Query: 406 AALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMI 465
AA E+ Q D +TL+ Y + G M AE +F +R++ +N M+
Sbjct: 113 AARRLFDEM--------PQRDAVTWNTLLGAYVRRGLMVEAEKLFDEMPQRNVASWNTMV 164
Query: 466 ACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKI 525
+ G KA+ +F+ M K D+ + ++S F G + E+ +
Sbjct: 165 TGFFSAGQVNKALDMFDAMPVK----DSASLGTLVSGFIKNGRLHEAEELLTKRLRVTDM 220
Query: 526 SPETDHYACMIDLYGRANQLEKAIEFMKSIP 556
D Y +I YG+ ++ A IP
Sbjct: 221 DEAVDAYNTLIAAYGQVGRVSDARRLFDMIP 251
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%)
Query: 15 QAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
Q I+ T T+N L+ +YS+ L ++ +F +MP++++ SWN +I
Sbjct: 421 QLIEKSFLPDTATSNALMTMYSRGGALTDAEAIFKQMPQKDLVSWNALI 469
>gi|115473581|ref|NP_001060389.1| Os07g0635800 [Oryza sativa Japonica Group]
gi|22293699|dbj|BAC10044.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113611925|dbj|BAF22303.1| Os07g0635800 [Oryza sativa Japonica Group]
gi|125601219|gb|EAZ40795.1| hypothetical protein OsJ_25273 [Oryza sativa Japonica Group]
Length = 705
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 199/698 (28%), Positives = 318/698 (45%), Gaps = 145/698 (20%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+ +EA H + G T+ QL+ Y+K + + ++FD MP RN F+WN +I
Sbjct: 68 DFQEARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMPRRNSFAWNAVI- 126
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
+ L D+ G ++AL++F M + D + +D
Sbjct: 127 -----------KGLVDA--------------------GRFSEALEMFWGMVN-DGSVAVD 154
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASG------FAVSSLIDMYSKCRCYEE 178
FT + C L V GR++ MV+T + ASG F +L+DM++KC C +E
Sbjct: 155 GFTYPPVIKACAALGAVAQGRKVWE-MVET-DIASGNARPNVFVQCALVDMFAKCGCLDE 212
Query: 179 ACRVFE--------------GCT-------EEVNLIS-------------KNAMVAACCR 204
A VFE G T E V+L + +++AC R
Sbjct: 213 ARNVFESMQVRDLAAWTAMIGGTVHSGNWLEVVDLFNHMRSEGFGVDSLIAATVISACGR 272
Query: 205 EGEM-----------------------------------EMALKTFWRQPELNDAVSWNT 229
GE+ EMA FW D VSW++
Sbjct: 273 AGELQVGTALHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCLFWSTNS-KDVVSWSS 331
Query: 230 LISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG 289
LI GY QNG + LF M G+ N T AS L L+ ++ KEIH + +++G
Sbjct: 332 LIVGYSQNGMHNVSVSLFCEMISLGINPNSSTLASILPCLSVLKLIRSGKEIHCFSIRHG 391
Query: 290 LISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFD 349
L + FV S ++D+Y K QG + A F
Sbjct: 392 LERSEFVVSALIDLYSK-------------------------------QGLIRVAETIFW 420
Query: 350 SLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALH 409
+K++ +W ++ +GY ++ F L + K G+ D + +V +L C L
Sbjct: 421 LTLDKDLAIWNSMVAGYAVNGYSDSAFCAL-RLLQKVGLKPDHVTVVSVLPLCNQHHMLI 479
Query: 410 PGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYA 469
GKE+HAY+++ + + + L+DMY KCG + A+ +FQ ER+ V YN++I+ +
Sbjct: 480 QGKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFG 539
Query: 470 HHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPET 529
H HE++A+ F+ M GI PD VTFVA+LS H G ++ G ++SM DY ISPE
Sbjct: 540 KHNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEK 599
Query: 530 DHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLR 589
+HY+C++DLY R +L++A FM ++ E + +LG L CR++ ++A +++
Sbjct: 600 EHYSCIVDLYSRCGKLDEAWCFMSNMAEEPEIDVLGGLLAACRVHNRMDIAELVGKRIFE 659
Query: 590 LEGNNKARYVQLANVYAAEGNWAEMGRIRK--QMRGMK 625
N+ ++ L+N+YA G W+++ RIR Q R +K
Sbjct: 660 QNPNDPGYHILLSNIYADAGMWSDVTRIRTMIQERNLK 697
>gi|15217514|ref|NP_177305.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169720|sp|Q9C9I6.1|PP116_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g71490
gi|12323739|gb|AAG51835.1|AC016163_24 unknown protein; 40702-42747 [Arabidopsis thaliana]
gi|56381899|gb|AAV85668.1| At1g71490 [Arabidopsis thaliana]
gi|56790238|gb|AAW30036.1| At1g71490 [Arabidopsis thaliana]
gi|332197086|gb|AEE35207.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 681
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 183/653 (28%), Positives = 298/653 (45%), Gaps = 71/653 (10%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H I +G+ ++ +L+ YS NL E++ + + + WN +I++ K+
Sbjct: 66 HAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELF 125
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
++ + Y M+ + IR D FT S L
Sbjct: 126 EEV-----------IAAYKRMV-----------------------SKGIRPDAFTYPSVL 151
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C + L+V FGR +H + +S +S + ++LI MY + R A R+F+ E +
Sbjct: 152 KACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFER-DA 210
Query: 193 ISKNAMVAACCREGEMEMALKTF---WRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
+S NA++ EG A + F W ++WN + G +Q G+ L L R
Sbjct: 211 VSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISR 270
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
M + L AC + ++ KEIH + + V + ++ +Y KC++
Sbjct: 271 MRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKD 330
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
+ +A +IV F E ++ W ++ SGY +
Sbjct: 331 LRHA-----------------LIV--------------FRQTEENSLCTWNSIISGYAQL 359
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
E LL E + G +++ L +L CA A L GKE H YILR D +
Sbjct: 360 NKSEEASHLLREMLVA-GFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTM 418
Query: 430 I-STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
+ ++LVD+Y+K G + A+ + +RD V Y +I Y + G A+ LF+EM G
Sbjct: 419 LWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSG 478
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
IKPD VT VA+LSA H V GE+ F M +Y I P H++CM+DLYGRA L KA
Sbjct: 479 IKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKA 538
Query: 549 IEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAE 608
+ + ++P + + LN C ++ N ++ A EKLL ++ N YV +AN+YAA
Sbjct: 539 KDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAA 598
Query: 609 GNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
G+W+++ +R MR + + GC+W+ + +F+VGD S P+ Y +L
Sbjct: 599 GSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLL 651
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 98/237 (41%), Gaps = 32/237 (13%)
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLL 319
H+ AS LSAC +R ++H+ + +G+ + + +V Y N A+S+
Sbjct: 44 HSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSI--- 100
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLL 379
+ NS D L + + W L + Y K + E +
Sbjct: 101 --IENS-----------------------DIL---HPLPWNVLIASYAKNELFEEVIAAY 132
Query: 380 SEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
V+K G+ DA +L AC + G+ +H I + + + L+ MY +
Sbjct: 133 KRMVSK-GIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKR 191
Query: 440 CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTF 496
NM A +F ERD V +N +I CYA G +A LF++M G++ +T+
Sbjct: 192 FRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITW 248
>gi|356510957|ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Glycine max]
Length = 617
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 157/451 (34%), Positives = 244/451 (54%), Gaps = 9/451 (1%)
Query: 213 KTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGL 272
+ + Q + +W LI Y G + L + M + V TF++ SAC +
Sbjct: 63 RLLFSQLHTPNPFAWTALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAV 122
Query: 273 RNVKCAKEIHSW-VLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSM 331
R+ ++H+ +L G S+ +V++ ++D+Y KC ++ A + R+ S + +
Sbjct: 123 RHSALGAQLHAQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWTGL 182
Query: 332 IVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF--VTKEGVV 389
IV Y+ G+M AR FD L K++V WTA+ +GY AQN + D L F + EGV
Sbjct: 183 IVAYTRIGDMRAARDLFDGLPVKDMVTWTAMVTGY--AQNAMPM-DALEVFRRLRDEGVE 239
Query: 390 TDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI--STLVDMYSKCGNMTYAE 447
D + LV ++ ACA A I G + ++ S L+DMYSKCGN+ A
Sbjct: 240 IDEVTLVGVISACAQLGASKYANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVEEAY 299
Query: 448 IIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCG 507
+F+ ER++ Y+ MI +A HG AI LF +MLE G+KP+ VTFV +L+A H G
Sbjct: 300 DVFKGMRERNVFSYSSMIVGFAIHGRARAAIKLFYDMLETGVKPNHVTFVGVLTACSHAG 359
Query: 508 SVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSF 567
V+ G++ F SM Y ++P + YACM DL RA LEKA++ ++++P E D + G+
Sbjct: 360 LVDQGQQLFASMEKCYGVAPTAELYACMTDLLSRAGYLEKALQLVETMPMESDGAVWGAL 419
Query: 568 LNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGN 627
L ++ N ++A A ++L LE +N Y+ L+N YA+ G W ++ ++RK +R
Sbjct: 420 LGASHVHGNPDVAEIASKRLFELEPDNIGNYLLLSNTYASAGRWDDVSKVRKLLREKNLK 479
Query: 628 RFAGCSWVYVEHE-IHIFTVGDVSHPKTNAI 657
+ G SWV ++ IH F GDVSHPK N I
Sbjct: 480 KNPGWSWVEAKNGMIHKFVAGDVSHPKINEI 510
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 129/265 (48%), Gaps = 49/265 (18%)
Query: 13 HVQAIK-AGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHD 71
H Q + G + N +I +Y K LR +R +FDEMPER+V SW +I A + D
Sbjct: 132 HAQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWTGLIVAYTRIGD 191
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
++ AR LFD P KD+VT+ +M+ GY DAL++F ++ DE + +DE T+
Sbjct: 192 MRAARDLFDGLPVKDMVTWTAMVTGYAQ-NAMPMDALEVFRRLR--DEGVEIDEVTLVGV 248
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV-------SSLIDMYSKCRCYEEACRVFE 184
++ C +L G +A ++ ++SGF V S+LIDMYSKC EEA VF+
Sbjct: 249 ISACAQL-----GASKYANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVEEAYDVFK 303
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
G E N+ S ++M I G+ +G A +
Sbjct: 304 GMRER-NVFSYSSM--------------------------------IVGFAIHGRARAAI 330
Query: 245 KLFVRMGENGVRWNEHTFASALSAC 269
KLF M E GV+ N TF L+AC
Sbjct: 331 KLFYDMLETGVKPNHVTFVGVLTAC 355
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 128/510 (25%), Positives = 219/510 (42%), Gaps = 82/510 (16%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYS--KHNLLRE-SRKLFDEMPERNVFS 58
R +L +A H Q L ++ +L+ + + H L R LF ++ N F+
Sbjct: 17 RCSSLNQAKEVHAQIYIKNLQQSSYVLTKLLRLVTALPHVPLHSYPRLLFSQLHTPNPFA 76
Query: 59 WNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSAD 118
W +I A L QA S + SS K V+ S
Sbjct: 77 WTALIRAYALRGPLSQALSFY-SSMRKRRVSPIS-------------------------- 109
Query: 119 EHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVS-SLIDMYSKCRCYE 177
FT ++ + C + + G QLHA + +S V+ ++IDMY KC
Sbjct: 110 -------FTFSALFSACAAVRHSALGAQLHAQTLLLGGFSSDLYVNNAVIDMYVKCGSLR 162
Query: 178 EACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQN 237
A VF+ E ++IS ++ A R G+M A F P + D V+W +++GY QN
Sbjct: 163 CARMVFDEMPER-DVISWTGLIVAYTRIGDMRAARDLFDGLP-VKDMVTWTAMVTGYAQN 220
Query: 238 GDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKN--GLISNPF 295
+ L++F R+ + GV +E T +SAC L K A I + G+ N
Sbjct: 221 AMPMDALEVFRRLRDEGVEIDEVTLVGVISACAQLGASKYANWIRDIAESSGFGVGDNVL 280
Query: 296 VSSGIVDVYCKCENMNYAESMLLLKGV--RNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
V S ++D+Y KC N+ E+ + KG+ RN FS SSMIVG+++ G A + F
Sbjct: 281 VGSALIDMYSKCGNVE--EAYDVFKGMRERNVFSYSSMIVGFAIHGRARAAIKLF----- 333
Query: 354 KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
+D+L + GV + + V +L AC+ + G++
Sbjct: 334 ----------------------YDML-----ETGVKPNHVTFVGVLTACSHAGLVDQGQQ 366
Query: 414 IHAYILR-MGVQMDKKLISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMIACYAHH 471
+ A + + GV +L + + D+ S+ G + A +++ +E D ++ ++ H
Sbjct: 367 LFASMEKCYGVAPTAELYACMTDLLSRAGYLEKALQLVETMPMESDGAVWGALLGASHVH 426
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
G+ + A + + + E ++PD + +LS
Sbjct: 427 GNPDVAEIASKRLFE--LEPDNIGNYLLLS 454
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/195 (18%), Positives = 73/195 (37%), Gaps = 48/195 (24%)
Query: 406 AALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNM---TYAEIIFQNFIERDLVLYN 462
++L+ KE+HA I +Q +++ L+ + + ++ +Y ++F + +
Sbjct: 19 SSLNQAKEVHAQIYIKNLQQSSYVLTKLLRLVTALPHVPLHSYPRLLFSQLHTPNPFAWT 78
Query: 463 VMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS---AFRH-------------- 505
+I YA G +A+ + M ++ + P + TF A+ S A RH
Sbjct: 79 ALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAVRHSALGAQLHAQTLLL 138
Query: 506 -------------------CGSVEMGEKYFNSMTADYKISPETD--HYACMIDLYGRANQ 544
CGS+ F+ M PE D + +I Y R
Sbjct: 139 GGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEM-------PERDVISWTGLIVAYTRIGD 191
Query: 545 LEKAIEFMKSIPTEE 559
+ A + +P ++
Sbjct: 192 MRAARDLFDGLPVKD 206
>gi|359493517|ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Vitis vinifera]
Length = 573
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 149/445 (33%), Positives = 235/445 (52%), Gaps = 10/445 (2%)
Query: 227 WNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEH-TFASALSACCGLRNVKCAKEIHSWV 285
+ +I+ Y + D L L+ M W H + L +C + A+ +H V
Sbjct: 122 YTAMITAYASHSDHTSALLLYRNMVRRRRPWPNHFIYPHVLKSCTQVVGPGSARMVHCQV 181
Query: 286 LKNGLISNPFVSSGIVDVYCK-CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEA 344
L++G P V + ++D Y + ++ A + RN S ++MI GY+ G + A
Sbjct: 182 LRSGFEQYPVVQTALLDAYLRFWSDVESARLLFDEMTERNVVSWTAMISGYTRLGQIGNA 241
Query: 345 RRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKE------GVVTDALILVIL 398
F+ + E++V W AL +GY + L + E G + + V
Sbjct: 242 VLLFEEMPERDVPSWNALIAGYTQNGLFMEALSLFRRMIAVEAGAWGQGNRPNQVTAVCS 301
Query: 399 LGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDL 458
L AC L GK IH Y+ R G+ +D + + LVDMY KCG + A +F +ER L
Sbjct: 302 LSACGHTGMLRLGKWIHGYVYRNGLGLDSFVSNALVDMYGKCGCLKEARRVFDRTLERSL 361
Query: 459 VLYNVMIACYAHHGHEEKAILLFEEMLE--KGIKPDAVTFVAILSAFRHCGSVEMGEKYF 516
+N MI C A HG + AI +FEEM+ G+KPD VTF+ +L+A H G VE G YF
Sbjct: 362 TSWNSMINCLALHGQSQNAISVFEEMMTCGSGVKPDEVTFIGLLNACTHGGLVEKGWLYF 421
Query: 517 NSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRN 576
MT +Y I P+ +HY C++DL GRA Q E+A+E ++ + E D VI GS LN C+++ +
Sbjct: 422 ELMTQNYGIEPQIEHYGCLVDLLGRAGQFEEAMEVVRGMRIEPDEVIWGSLLNGCKIHGH 481
Query: 577 AELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVY 636
+LA + +KL+ ++ NN + LAN+Y G W E+ ++RK ++ ++ GCSW+
Sbjct: 482 TDLAEFSIKKLIDMDPNNGGYGIMLANIYGELGKWDEVRKVRKVLKEQNAHKTPGCSWIE 541
Query: 637 VEHEIHIFTVGDVSHPKTNAIYSVL 661
+++++H F D +HP+T IY+ L
Sbjct: 542 IDNQVHQFYSVDKTHPRTEEIYNTL 566
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 192/429 (44%), Gaps = 50/429 (11%)
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
+L AR +FD ++ Y +M+ Y + + + AL L+ M + F
Sbjct: 103 NLSYARFIFDHVESPNVYLYTAMITAYASHSDHTS-ALLLYRNMVRRRRPWP-NHFIYPH 160
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L C +++ G R +H ++++ + ++L+D Y + E+ R+ E
Sbjct: 161 VLKSCTQVVGPGSARMVHCQVLRSGFEQYPVVQTALLDAYLRFWSDVESARLLFDEMTER 220
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
N++S AM++ R G++ A+ F PE D SWN LI+GY QNG E L LF RM
Sbjct: 221 NVVSWTAMISGYTRLGQIGNAVLLFEEMPE-RDVPSWNALIAGYTQNGLFMEALSLFRRM 279
Query: 251 -------GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
G R N+ T +LSAC ++ K IH +V +NGL + FVS+ +VD+
Sbjct: 280 IAVEAGAWGQGNRPNQVTAVCSLSACGHTGMLRLGKWIHGYVYRNGLGLDSFVSNALVDM 339
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL- 362
Y KC G ++EARR FD E+++ W ++
Sbjct: 340 YGKC-------------------------------GCLKEARRVFDRTLERSLTSWNSMI 368
Query: 363 --FSGYVKAQNCEALFDLLSEFVT-KEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
+ + ++QN ++F+ E +T GV D + + LL AC + G +
Sbjct: 369 NCLALHGQSQNAISVFE---EMMTCGSGVKPDEVTFIGLLNACTHGGLVEKGWLYFELMT 425
Query: 420 R-MGVQMDKKLISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
+ G++ + LVD+ + G A E++ IE D V++ ++ HGH + A
Sbjct: 426 QNYGIEPQIEHYGCLVDLLGRAGQFEEAMEVVRGMRIEPDEVIWGSLLNGCKIHGHTDLA 485
Query: 478 ILLFEEMLE 486
+++++
Sbjct: 486 EFSIKKLID 494
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 123/256 (48%), Gaps = 13/256 (5%)
Query: 9 ALICHVQAIKAGLTLTTITTNQLIHIYSKH-NLLRESRKLFDEMPERNVFSWNTIISACI 67
A + H Q +++G + L+ Y + + + +R LFDEM ERNV SW +IS
Sbjct: 174 ARMVHCQVLRSGFEQYPVVQTALLDAYLRFWSDVESARLLFDEMTERNVVSWTAMISGYT 233
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLF-----IEMQSADEHIR 122
+ + A LF+ P +D+ ++N+++ GY G +AL LF +E + + R
Sbjct: 234 RLGQIGNAVLLFEEMPERDVPSWNALIAGYTQ-NGLFMEALSLFRRMIAVEAGAWGQGNR 292
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
++ T +L+ C + G+ +H ++ + F ++L+DMY KC C +EA RV
Sbjct: 293 PNQVTAVCSLSACGHTGMLRLGKWIHGYVYRNGLGLDSFVSNALVDMYGKCGCLKEARRV 352
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN-----DAVSWNTLISGYVQN 237
F+ T E +L S N+M+ G+ + A+ F D V++ L++
Sbjct: 353 FDR-TLERSLTSWNSMINCLALHGQSQNAISVFEEMMTCGSGVKPDEVTFIGLLNACTHG 411
Query: 238 GDAEEGLKLFVRMGEN 253
G E+G F M +N
Sbjct: 412 GLVEKGWLYFELMTQN 427
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 102/253 (40%), Gaps = 50/253 (19%)
Query: 340 NMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILL 399
N+ AR FD + NV ++TA+ + Y + + L V + + I +L
Sbjct: 103 NLSYARFIFDHVESPNVYLYTAMITAYASHSDHTSALLLYRNMVRRRRPWPNHFIYPHVL 162
Query: 400 GACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK-CGNMTYAEIIFQNFIERDL 458
+C + +H +LR G + + + L+D Y + ++ A ++F ER++
Sbjct: 163 KSCTQVVGPGSARMVHCQVLRSGFEQYPVVQTALLDAYLRFWSDVESARLLFDEMTERNV 222
Query: 459 VLYNVMIACYAHHGHEEKAILLFEEMLEK------------------------------- 487
V + MI+ Y G A+LLFEEM E+
Sbjct: 223 VSWTAMISGYTRLGQIGNAVLLFEEMPERDVPSWNALIAGYTQNGLFMEALSLFRRMIAV 282
Query: 488 -------GIKPDAVTFVAILSAFRHCGSVEMGE-----KYFNSMTADYKISPETDHYACM 535
G +P+ VT V LSA H G + +G+ Y N + D +S +
Sbjct: 283 EAGAWGQGNRPNQVTAVCSLSACGHTGMLRLGKWIHGYVYRNGLGLDSFVS------NAL 336
Query: 536 IDLYGRANQLEKA 548
+D+YG+ L++A
Sbjct: 337 VDMYGKCGCLKEA 349
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 4/157 (2%)
Query: 57 FSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSML-CGYINAEGYEADALKLFIEMQ 115
F N ++ K LK+AR +FD + + L ++NSM+ C + G +A+ +F EM
Sbjct: 331 FVSNALVDMYGKCGCLKEARRVFDRTLERSLTSWNSMINC--LALHGQSQNAISVFEEMM 388
Query: 116 SADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFA-VSSLIDMYSKCR 174
+ ++ DE T LN C V G M + L+D+ +
Sbjct: 389 TCGSGVKPDEVTFIGLLNACTHGGLVEKGWLYFELMTQNYGIEPQIEHYGCLVDLLGRAG 448
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMA 211
+EEA V G E + + +++ C G ++A
Sbjct: 449 QFEEAMEVVRGMRIEPDEVIWGSLLNGCKIHGHTDLA 485
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 59/165 (35%), Gaps = 46/165 (27%)
Query: 442 NMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM----------------- 484
N++YA IF + ++ LY MI YA H A+LL+ M
Sbjct: 103 NLSYARFIFDHVESPNVYLYTAMITAYASHSDHTSALLLYRNMVRRRRPWPNHFIYPHVL 162
Query: 485 -------------------LEKGIKPDAVTFVAILSAF-RHCGSVEMGEKYFNSMTADYK 524
L G + V A+L A+ R VE F+ MT
Sbjct: 163 KSCTQVVGPGSARMVHCQVLRSGFEQYPVVQTALLDAYLRFWSDVESARLLFDEMTERNV 222
Query: 525 ISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE----DAVILG 565
+S + MI Y R Q+ A+ + +P + +A+I G
Sbjct: 223 VS-----WTAMISGYTRLGQIGNAVLLFEEMPERDVPSWNALIAG 262
>gi|357150569|ref|XP_003575504.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 548
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 153/471 (32%), Positives = 243/471 (51%), Gaps = 33/471 (7%)
Query: 227 WNTLISGYVQNGD---AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHS 283
W +S Y ++ A E LF+ M +G R N T +S L + LR ++H
Sbjct: 73 WTATVSSYAKHASPALAAEAFPLFMFMLRSGPRPNGFTVSSVLKSLSKLRAAHQVCQVHG 132
Query: 284 WVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEE 343
+++K GL S+ V + ++D Y + A + N ++M+ GY G++E
Sbjct: 133 FLVKAGLASSLHVGATLLDSYGNLCRVKDARRVFDEMPRSNVVVGNAMVSGYVKAGDVEA 192
Query: 344 ARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKE----------------- 386
AR+ FD + E++ + W L SGY++ + DL E +
Sbjct: 193 ARQVFDGMVERDSISWNTLMSGYLRRGDAGLARDLFDEMPQRNVNSWNMMISACSEVGLW 252
Query: 387 -------------GVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL 433
DA + +L+ ACA L ++++ + + V+M+ + ++L
Sbjct: 253 ADSVAVFNQMRFMSFRPDAATMAVLMSACAQLGFLSVARQVYGLLRKGCVEMNCHVHNSL 312
Query: 434 VDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDA 493
VDM++KCG + A ++F +D+V YNVM++ AHHGH + A+ LFE+M+E G++PDA
Sbjct: 313 VDMFAKCGCFSEAHLLFAEMDPKDVVSYNVMVSALAHHGHGKDALKLFEQMIEGGLQPDA 372
Query: 494 VTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMK 553
VTF+ +LSA H G V+ G+ YF +M Y I DHYACM+DLYGR +E+A F+K
Sbjct: 373 VTFLGVLSACAHAGLVDSGKYYFETMGTTYAIEKSADHYACMVDLYGRVGLIEEAHYFVK 432
Query: 554 SIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAE 613
+P + A I G+ LN CR + N ++ A +L+R+E N YV L+N A W
Sbjct: 433 IMPVKPHAGIWGALLNACRKHCNIDVGEVAARELIRIEPMNPGNYVLLSNTLAWSQQWDA 492
Query: 614 MGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIF 664
+G +R+ MRG ++ G SWV VE +H F +GD SHP + I +L +
Sbjct: 493 VGDVRQLMRGNGIDKNTGFSWVEVESVVHEFLMGDFSHPSFDEICGILELL 543
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 118/245 (48%), Gaps = 36/245 (14%)
Query: 25 TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPH 84
+ N ++ Y K + +R++FD M ER+ SWNT++S ++ D AR LFD P
Sbjct: 174 VVVGNAMVSGYVKAGDVEAARQVFDGMVERDSISWNTLMSGYLRRGDAGLARDLFDEMPQ 233
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
+++ ++N M+ + G AD++ +F +M+ R D T+ ++ C +L +
Sbjct: 234 RNVNSWNMMISA-CSEVGLWADSVAVFNQMRFMS--FRPDAATMAVLMSACAQLGFLSVA 290
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
RQ++ + K + + +SL+DM++KC C+ EA +F
Sbjct: 291 RQVYGLLRKGCVEMNCHVHNSLVDMFAKCGCFSEAHLLFA-------------------- 330
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFAS 264
EM K D VS+N ++S +G ++ LKLF +M E G++ + TF
Sbjct: 331 ----EMDPK---------DVVSYNVMVSALAHHGHGKDALKLFEQMIEGGLQPDAVTFLG 377
Query: 265 ALSAC 269
LSAC
Sbjct: 378 VLSAC 382
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 136/547 (24%), Positives = 212/547 (38%), Gaps = 138/547 (25%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMP--ERNVFSW 59
R+L+ A H Q + GL L LI S + +R +FD +P NV+ W
Sbjct: 17 RALSPAAARQLHAQLLLRGLPLPARAAVTLIASSSSP---QYARAIFDSVPAASANVYLW 73
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
+S+ K +SP A+A LF+ M +
Sbjct: 74 TATVSSYAK-----------HASP------------------ALAAEAFPLFMFMLRSGP 104
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK-CRCYEE 178
R + FTV+S L KL Q+H F+VK +S ++L+D Y CR ++
Sbjct: 105 --RPNGFTVSSVLKSLSKLRAAHQVCQVHGFLVKAGLASSLHVGATLLDSYGNLCRV-KD 161
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG 238
A RVF+ N++ NAMV+ + G++E A + F E D++SWNTL+SGY++ G
Sbjct: 162 ARRVFDEMPRS-NVVVGNAMVSGYVKAGDVEAARQVFDGMVE-RDSISWNTLMSGYLRRG 219
Query: 239 DAEEGLKLFVRMGENGVR-WN------------------------------EHTFASALS 267
DA LF M + V WN T A +S
Sbjct: 220 DAGLARDLFDEMPQRNVNSWNMMISACSEVGLWADSVAVFNQMRFMSFRPDAATMAVLMS 279
Query: 268 ACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFS 327
AC L + A++++ + K + N V + +VD++ KC
Sbjct: 280 ACAQLGFLSVARQVYGLLRKGCVEMNCHVHNSLVDMFAKC-------------------- 319
Query: 328 ISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEG 387
G EA F + K+VV + + S + + L + + + G
Sbjct: 320 -----------GCFSEAHLLFAEMDPKDVVSYNVMVSALAHHGHGKDALKLFEQMI-EGG 367
Query: 388 VVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAE 447
+ DA+ + +L ACA + GK Y MG TYA
Sbjct: 368 LQPDAVTFLGVLSACAHAGLVDSGKY---YFETMGT--------------------TYA- 403
Query: 448 IIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR-HC 506
IE+ Y M+ Y G E+A + M +KP A + A+L+A R HC
Sbjct: 404 ------IEKSADHYACMVDLYGRVGLIEEAHYFVKIM---PVKPHAGIWGALLNACRKHC 454
Query: 507 GSVEMGE 513
++++GE
Sbjct: 455 -NIDVGE 460
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 116/265 (43%), Gaps = 18/265 (6%)
Query: 314 ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT--EKNVVVWTALFSGYVK--- 368
+ LLL+G+ + ++ S + + AR FDS+ NV +WTA S Y K
Sbjct: 28 HAQLLLRGLPLPARAAVTLIASS--SSPQYARAIFDSVPAASANVYLWTATVSSYAKHAS 85
Query: 369 -AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDK 427
A EA F L F+ + G + + +L + + A H ++H ++++ G+
Sbjct: 86 PALAAEA-FPLFM-FMLRSGPRPNGFTVSSVLKSLSKLRAAHQVCQVHGFLVKAGLASSL 143
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
+ +TL+D Y + A +F ++V+ N M++ Y G E A +F+ M+E+
Sbjct: 144 HVGATLLDSYGNLCRVKDARRVFDEMPRSNVVVGNAMVSGYVKAGDVEAARQVFDGMVER 203
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACM-IDLYGRANQLE 546
D++++ ++S + G + F+ M S AC + L+ + +
Sbjct: 204 ----DSISWNTLMSGYLRRGDAGLARDLFDEMPQRNVNSWNMMISACSEVGLWADSVAVF 259
Query: 547 KAIEFMKSIPTEEDAVILGSFLNVC 571
+ FM P DA + ++ C
Sbjct: 260 NQMRFMSFRP---DAATMAVLMSAC 281
>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 169/542 (31%), Positives = 267/542 (49%), Gaps = 72/542 (13%)
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE 188
TS L CV ++ GRQLH ++ + + L+D+Y+ C A R+F+G
Sbjct: 66 TSILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDG--- 122
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
+ +N + WN LI Y + G E ++L+
Sbjct: 123 ---MPKRNVFL---------------------------WNVLIRAYAREGPREAAVRLYR 152
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
M E+GV + T+ L AC L +++ +E+H V + FV +G+VD+Y KC
Sbjct: 153 GMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQRVSGTRWGQDVFVCAGVVDMYAKC- 211
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
G +++AR FD + ++ VVW ++ + Y
Sbjct: 212 ------------------------------GCVDDARAVFDGIAVRDAVVWNSMIAAY-- 239
Query: 369 AQNCEALFDL-LSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDK 427
QN + L L + G+ LV + A A AAL G+E+H + R G +
Sbjct: 240 GQNGRPMEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQD 299
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML-E 486
KL ++LVDMY+K G + A ++F+ ++R+LV +N MI Y HGH ++A+ LF +M +
Sbjct: 300 KLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGD 359
Query: 487 KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLE 546
+ PD +TFV +LSA H G VE +++F M Y I P HY C+ID+ G + E
Sbjct: 360 AQVTPDNITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFE 419
Query: 547 KAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYA 606
+A + +K + E D+ I G+ LN C++++N EL A +KL+ LE + YV L+N+YA
Sbjct: 420 EAYDLIKGMSIEPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVHLSNIYA 479
Query: 607 AEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIF 664
G W + R+RK M RG+K + CSW+ ++ + H F VGD SHP+++ IY L
Sbjct: 480 QSGKWEKAARVRKLMTNRGLK--KILACSWIELKGKTHGFLVGDASHPRSDEIYGELERL 537
Query: 665 TG 666
G
Sbjct: 538 EG 539
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 124/503 (24%), Positives = 203/503 (40%), Gaps = 66/503 (13%)
Query: 74 QARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLN 133
AR LFD P +++ +N ++ Y EG A++L+ M + + D FT L
Sbjct: 115 HARRLFDGMPKRNVFLWNVLIRAYAR-EGPREAAVRLYRGM--VEHGVEPDNFTYPLVLK 171
Query: 134 LCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLI 193
C LL++ GR++H + T F + ++DMY+KC C ++A VF+G
Sbjct: 172 ACAALLDLETGREVHQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIA------ 225
Query: 194 SKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGEN 253
+ DAV WN++I+ Y QNG E L L M N
Sbjct: 226 ---------------------------VRDAVVWNSMIAAYGQNGRPMEALALCRDMAAN 258
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA 313
G+ T SA+SA + +E+H + + G + + +VD+Y K + A
Sbjct: 259 GIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSLVDMYAKSGWVQVA 318
Query: 314 ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT-EKNVVVWTALFSGYVKAQNC 372
+ R S ++MI GY + G+ +EA F+ + + V F G + A N
Sbjct: 319 RVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPDNITFVGVLSACNH 378
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY--ILRMGVQMDKKLI 430
+ + EF V ++ + C + H G+ AY I M ++ D +
Sbjct: 379 GGMVEEAKEFFYLM-VNAYSIKPTVQHYTCVIDVLGHTGRFEEAYDLIKGMSIEPDSGIW 437
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIE---RDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
L++ N+ E+ Q IE D Y + YA G EKA + + M +
Sbjct: 438 GALLNGCKIHKNVELGELALQKLIELEPEDAGNYVHLSNIYAQSGKWEKAARVRKLMTNR 497
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEK 547
G+K IL+ C +E+ K + D P +D ++YG +LE
Sbjct: 498 GLK-------KILA----CSWIELKGKTHGFLVGDAS-HPRSD------EIYGELERLEG 539
Query: 548 AIEFMKSIPTEEDAVILGSFLNV 570
+ +P I+ F NV
Sbjct: 540 LMSDAGYVPD-----IIPVFHNV 557
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 103/237 (43%), Gaps = 32/237 (13%)
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLL 319
H S L +C +++ +++H +L +GL + +S+ +VD+Y C
Sbjct: 63 HHHTSILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAAC------------ 110
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLL 379
G + ARR FD + ++NV +W L Y + EA L
Sbjct: 111 -------------------GQVGHARRLFDGMPKRNVFLWNVLIRAYAREGPREAAVRLY 151
Query: 380 SEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
V + GV D ++L ACA L G+E+H + D + + +VDMY+K
Sbjct: 152 RGMV-EHGVEPDNFTYPLVLKACAALLDLETGREVHQRVSGTRWGQDVFVCAGVVDMYAK 210
Query: 440 CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTF 496
CG + A +F RD V++N MIA Y +G +A+ L +M GI P T
Sbjct: 211 CGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPMEALALCRDMAANGIGPTIATL 267
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 153/410 (37%), Gaps = 114/410 (27%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNV------ 56
S +L+ H + + +GL T+ + +L+ +Y+ + +R+LFD MP+RNV
Sbjct: 75 SGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKRNVFLWNVL 134
Query: 57 -----------------------------FSWNTIISACIKSHDLK-------------- 73
F++ ++ AC DL+
Sbjct: 135 IRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQRVSGTRW 194
Query: 74 ---------------------QARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
AR++FD +D V +NSM+ Y G +AL L
Sbjct: 195 GQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAY-GQNGRPMEALALCR 253
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
+M A I T+ S ++ + GR+LH F + +SL+DMY+K
Sbjct: 254 DM--AANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSLVDMYAK 311
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
+ A +FE + L+S NAM I
Sbjct: 312 SGWVQVARVLFEQLMKR-ELVSWNAM--------------------------------IC 338
Query: 233 GYVQNGDAEEGLKLFVRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI 291
GY +G A+E L LF +M G+ V + TF LSAC V+ AKE +++ N
Sbjct: 339 GYGMHGHADEALALFNKMKGDAQVTPDNITFVGVLSACNHGGMVEEAKEFF-YLMVNAYS 397
Query: 292 SNPFVS--SGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQG 339
P V + ++DV + E+ L+KG+ S S I G L G
Sbjct: 398 IKPTVQHYTCVIDVL--GHTGRFEEAYDLIKGM--SIEPDSGIWGALLNG 443
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 92/200 (46%), Gaps = 5/200 (2%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
+++ KS ++ AR LF+ ++LV++N+M+CGY G+ +AL LF +M+ D
Sbjct: 303 TSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGY-GMHGHADEALALFNKMK-GDA 360
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKT-SNDASGFAVSSLIDMYSKCRCYEE 178
+ D T L+ C V ++ MV S + + +ID+ +EE
Sbjct: 361 QVTPDNITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEE 420
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPEL--NDAVSWNTLISGYVQ 236
A + +G + E + A++ C +E+ + EL DA ++ L + Y Q
Sbjct: 421 AYDLIKGMSIEPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVHLSNIYAQ 480
Query: 237 NGDAEEGLKLFVRMGENGVR 256
+G E+ ++ M G++
Sbjct: 481 SGKWEKAARVRKLMTNRGLK 500
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 173/590 (29%), Positives = 297/590 (50%), Gaps = 42/590 (7%)
Query: 75 ARSLFDS-SPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI--RMDEFTVTST 131
A +LF S SP + + +NS+L + E A LF + H+ R D +
Sbjct: 66 ALNLFSSISPLPESIVFNSLLRDL--SRSGEPRATILFYQRI---RHVGGRFDRISFPPI 120
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L K+ + G +LH F K + + F + L+DMY+ C A VF+
Sbjct: 121 LKAVSKVSALFEGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFD------- 173
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
EM+ + D V+WNT+I Y + G +E KLF M
Sbjct: 174 -----------------EMSQR---------DVVTWNTMIERYCRFGLLDEAFKLFEEMK 207
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
++ V +E + +SAC N++ + I+ ++++N + + + + +V +Y M+
Sbjct: 208 DSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMD 267
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
A VRN F ++M+ GYS G +++AR FD K++V WT + S Y ++ +
Sbjct: 268 MAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDH 327
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
+ + E G+ D + ++ ++ AC L K +H Y G++ + +
Sbjct: 328 PQEALRVFEEMCCS-GIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDN 386
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
L++MY+KCG + A +F+ R++V ++ MI +A HG ++ LF +M ++ ++P
Sbjct: 387 ALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEP 446
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
+ VTFV +L H G VE G+K F SMT +Y I+P+ +HY CM+DL+GRAN L +A+E
Sbjct: 447 NEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGRANLLREALEV 506
Query: 552 MKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNW 611
++S+P + VI GS ++ CR++ EL A +++L+LE ++ V ++N+YA E W
Sbjct: 507 IESMPMAPNVVIWGSLMSACRVHGELELGELAAKRILKLEPDHDGALVLMSNIYAREYRW 566
Query: 612 AEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+ IR M K + G S + + + H F +GD H ++N IY+ L
Sbjct: 567 DYVRIIRWIMEKKKVFKEKGLSRIDLNGKSHEFLIGDKRHKQSNEIYTKL 616
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 162/360 (45%), Gaps = 36/360 (10%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L E + H A K L+ +Y+ + +R +FDEM +R+V +WNT+I
Sbjct: 130 LFEGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIER 189
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
+ L +A LF+ EM+ D ++ DE
Sbjct: 190 YCRFGLLDEAFKLFE--------------------------------EMK--DSNVMPDE 215
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
+ + ++ C + N+ + R ++ F+++ +++L+ MY+ C + A F
Sbjct: 216 MILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFRK 275
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
+ NL AMV+ + G ++ A + + Q E+ D V W T+IS Y ++ +E L+
Sbjct: 276 MSVR-NLFVSTAMVSGYSKAGRLDDA-RVIFDQTEMKDLVCWTTMISAYAESDHPQEALR 333
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
+F M +G++ + T S +SAC L + AK +H + NGL S + + ++++Y
Sbjct: 334 VFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYA 393
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
KC ++ A + RN S SSMI +++ G ++ F + ++NV F G
Sbjct: 394 KCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVG 453
>gi|449441542|ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 652
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 167/497 (33%), Positives = 242/497 (48%), Gaps = 62/497 (12%)
Query: 227 WNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVL 286
WN + GY N E + LF +M VR N TF L +C + +EIH V+
Sbjct: 133 WNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVI 192
Query: 287 KNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARR 346
K GL N FV++ ++DVY + A + + RN + +SMI GY L + ARR
Sbjct: 193 KGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVALARR 252
Query: 347 HFDSLTEKNVVVWTALFSGYVK----------------------------------AQNC 372
FD E++VV+W + SGY++ + C
Sbjct: 253 LFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNTMLNGYANNGDVEAC 312
Query: 373 EALFDLLSE----------------------------FVTKEGVVTDALILVILLGACAL 404
E LF+ + E + VV + LV +L ACA
Sbjct: 313 EQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACAR 372
Query: 405 QAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVM 464
AL GK +H Y +G + + + L+DMYSKCG + A +F++ +DL+ +N M
Sbjct: 373 LGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDLKDLITWNSM 432
Query: 465 IACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYK 524
I A HG A+ LF +M G KPD +TF+ +L + H G VE G YFNSM +Y
Sbjct: 433 ICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEYS 492
Query: 525 ISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAE 584
I+P+ +HY CM+DL+GRA L++AIEF+K +P E DAVI + L CR+ +N +LA A
Sbjct: 493 IAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGACRIYKNIDLAELAL 552
Query: 585 EKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIF 644
+KL+ LE N A YV L+N+Y G W ++ R++ MR + GCS + V + F
Sbjct: 553 QKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVEF 612
Query: 645 TVGDVSHPKTNAIYSVL 661
D H ++ IY VL
Sbjct: 613 YSLDERHSQSKEIYGVL 629
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/441 (23%), Positives = 172/441 (39%), Gaps = 102/441 (23%)
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
++++ + + AR LFD P + +N++ GY + Y + + LF +M+S D +
Sbjct: 105 VVTSWVGLKQMAHARHLFDHFPDPKVELWNAISRGYFHNAFYR-EVVFLFGKMKSMD--V 161
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
R + FT L C K+ G ++H ++K + + F ++LID+YS R A +
Sbjct: 162 RPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYK 221
Query: 182 VFEGCTE------------------------------EVNLISKNAMVAACCREGEMEMA 211
+F G E E +++ N MV+ G+M+ A
Sbjct: 222 LFVGMLERNIVAWTSMISGYILCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAA 281
Query: 212 LKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGV-RW------------- 257
K F P D +SWNT+++GY NGD E +LF M E V W
Sbjct: 282 RKLFDTMP-YRDTMSWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCF 340
Query: 258 ------------------NEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
N+ T + LSAC L + K +H + G + +V +
Sbjct: 341 FEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNA 400
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFD---------- 349
++D+Y KC + A + +++ + +SMI G + G +A F
Sbjct: 401 LIDMYSKCGLIENAMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPD 460
Query: 350 --------------SLTEKNVVVWTALFSGYVKAQNCE------------ALFDLLSEFV 383
L E+ + ++ + Y A E L D EFV
Sbjct: 461 GITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFV 520
Query: 384 TKEGVVTDALILVILLGACAL 404
+ + DA+I LLGAC +
Sbjct: 521 KRMPMEADAVIWAALLGACRI 541
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 123/321 (38%), Gaps = 95/321 (29%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFS-------------- 58
H + IK GL LI +YS + + KLF M ERN+ +
Sbjct: 188 HCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRV 247
Query: 59 -----------------WNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAE 101
WN ++S I+ D+K AR LFD+ P++D +++N+ML GY N
Sbjct: 248 ALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNTMLNGYANNG 307
Query: 102 GYEADALKLFIEMQS------------------------------ADEHIRMDEFTVTST 131
EA +LF EM D + ++ T+ +
Sbjct: 308 DVEA-CEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTV 366
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L+ C +L + G+ +H + S + ++LIDMYSKC E A VFE
Sbjct: 367 LSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESM----- 421
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
+L D ++WN++I G +G + L LF +M
Sbjct: 422 ----------------------------DLKDLITWNSMICGLATHGCGADALTLFHQMK 453
Query: 252 ENGVRWNEHTFASALSACCGL 272
NG + + TF L +C L
Sbjct: 454 INGEKPDGITFIGVLCSCTHL 474
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 106/233 (45%), Gaps = 10/233 (4%)
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV 383
N + +++ + M AR FD + V +W A+ GY + L +
Sbjct: 98 NGYVAPNVVTSWVGLKQMAHARHLFDHFPDPKVELWNAISRGYFHNAFYREVVFLFGKMK 157
Query: 384 TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNM 443
+ + V + ++L +CA A G+EIH +++ G++ ++ + +TL+D+YS +
Sbjct: 158 SMD-VRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAI 216
Query: 444 TYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAF 503
A +F +ER++V + MI+ Y A LF+ E+ D V + ++S +
Sbjct: 217 GSAYKLFVGMLERNIVAWTSMISGYILCNRVALARRLFDLAPER----DVVLWNIMVSGY 272
Query: 504 RHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIP 556
G ++ K F++M Y+ +T + M++ Y +E + + +P
Sbjct: 273 IEIGDMKAARKLFDTMP--YR---DTMSWNTMLNGYANNGDVEACEQLFEEMP 320
Score = 45.4 bits (106), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 56/120 (46%), Gaps = 3/120 (2%)
Query: 395 LVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFI 454
+ LL +C A L +++ A I+ G Q + + +V + M +A +F +F
Sbjct: 70 FISLLRSCKTVALL---QKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFP 126
Query: 455 ERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
+ + L+N + Y H+ + + LF +M ++P+ TF +L + G+ GE+
Sbjct: 127 DPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEE 186
>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
1
gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 684
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 186/630 (29%), Positives = 300/630 (47%), Gaps = 73/630 (11%)
Query: 46 KLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEA 105
K D P F N +I+ K + AR + +P +++V++ S++ G + G+ +
Sbjct: 34 KTLDSPPP--PFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISG-LAQNGHFS 90
Query: 106 DALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS 165
AL F EM+ E + ++FT L G+Q+HA VK F S
Sbjct: 91 TALVEFFEMRR--EGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCS 148
Query: 166 LIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAV 225
DMY K R ++A ++F+ E+ PE N
Sbjct: 149 AFDMYCKTRLRDDARKLFD----EI----------------------------PERN-LE 175
Query: 226 SWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWV 285
+WN IS V +G E ++ F+ N TF + L+AC ++ ++H V
Sbjct: 176 TWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLV 235
Query: 286 LKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEAR 345
L++G ++ V +G++D Y KC+ + +E +
Sbjct: 236 LRSGFDTDVSVCNGLIDFYGKCKQIRSSEII----------------------------- 266
Query: 346 RHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQ 405
F + KN V W +L + YV+ E +L K+ V T ++ +L ACA
Sbjct: 267 --FTEMGTKNAVSWCSLVAAYVQNHEDEKA-SVLYLRSRKDIVETSDFMISSVLSACAGM 323
Query: 406 AALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMI 465
A L G+ IHA+ ++ V+ + S LVDMY KCG + +E F E++LV N +I
Sbjct: 324 AGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLI 383
Query: 466 ACYAHHGHEEKAILLFEEMLEKG--IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADY 523
YAH G + A+ LFEEM +G P+ +TFV++LSA G+VE G K F+SM + Y
Sbjct: 384 GGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTY 443
Query: 524 KISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEA 583
I P +HY+C++D+ GRA +E+A EF+K +P + + G+ N CR++ +L A
Sbjct: 444 GIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLA 503
Query: 584 EEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHI 643
E L +L+ + +V L+N +AA G WAE +R++++G+ + AG SW+ V++++H
Sbjct: 504 AENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHA 563
Query: 644 FTVGDVSHPKTNAIYSVLAIFTGELYEIAG 673
F D SH I + LA E+ E AG
Sbjct: 564 FQAKDRSHILNKEIQTTLAKLRNEM-EAAG 592
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 120/498 (24%), Positives = 201/498 (40%), Gaps = 102/498 (20%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A+K G L +Y K L ++RKLFDE+PERN+ +WN IS +
Sbjct: 131 HALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSV----- 185
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+G +A++ FIE + D H + T + L
Sbjct: 186 ---------------------------TDGRPREAIEAFIEFRRIDGH--PNSITFCAFL 216
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
N C L++ G QLH ++++ D + LID Y KC+ + +F
Sbjct: 217 NACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIF--------- 267
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
EM K +AVSW +L++ YVQN + E+ L++R +
Sbjct: 268 ---------------TEMGTK---------NAVSWCSLVAAYVQNHEDEKASVLYLRSRK 303
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+ V ++ +S LSAC G+ ++ + IH+ +K + FV S +VD+Y KC
Sbjct: 304 DIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKC----- 358
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G +E++ + FD + EKN+V +L GY
Sbjct: 359 --------------------------GCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQV 392
Query: 373 EALFDLLSEFVTKE-GVVTDALILVILLGACALQAALHPGKEIHAYILRM-GVQMDKKLI 430
+ L E + G + + V LL AC+ A+ G +I + G++ +
Sbjct: 393 DMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHY 452
Query: 431 STLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
S +VDM + G + A E I + I+ + ++ + HG + +L E + +
Sbjct: 453 SCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDP 512
Query: 490 KPDAVTFVAILSAFRHCG 507
K D+ V + + F G
Sbjct: 513 K-DSGNHVLLSNTFAAAG 529
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 119/253 (47%), Gaps = 42/253 (16%)
Query: 4 LNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
L+L + H +++G N LI Y K +R S +F EM +N SW +++
Sbjct: 223 LHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLV 282
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
+A +++H+ ++A L+ ++S + +
Sbjct: 283 AAYVQNHEDEKASVLY----------------------------------LRSRKDIVET 308
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
+F ++S L+ C + + GR +HA VK + + F S+L+DMY KC C E++ + F
Sbjct: 309 SDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAF 368
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQ------PELNDAVSWNTLISGYVQN 237
+ E+ NL+++N+++ +G+++MAL F P N +++ +L+S +
Sbjct: 369 DEMPEK-NLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPN-YMTFVSLLSACSRA 426
Query: 238 GDAEEGLKLFVRM 250
G E G+K+F M
Sbjct: 427 GAVENGMKIFDSM 439
>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 599
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 182/659 (27%), Positives = 306/659 (46%), Gaps = 101/659 (15%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
N+++ H ++I + L+ T ++I+ + H L + ++F++ E + F +N +I
Sbjct: 18 NIQQLKQIHAKSIISSLSYTQFIITKIINSFLSHACLDYATQVFNQTQEPDGFIYNAMIR 77
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
A S +P + YN M A ++I D
Sbjct: 78 AYSSSQ-----------TPCVAISIYNKM----------------------RACQNILGD 104
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
++T C V G+++H +V+ + GF SSL++ Y C
Sbjct: 105 KYTYPFVFKACASQFAVEKGKEVHGVIVRIGYELDGFLQSSLLNFYMVC----------- 153
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
GE+ A + F + + D V WN LI+GY + G +
Sbjct: 154 ---------------------GEIGNAQQVF-DEFDAKDVVFWNALITGYARQGMVLDSF 191
Query: 245 KLFVRMGE-NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF-VSSGIVD 302
+F M E VR NE T + AC +N+K + IH +++K+ ++ + + +++
Sbjct: 192 GVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKDMVLREGVKLEAALIN 251
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
+Y KC G ++ AR+ FD + EKN VVW +L
Sbjct: 252 LYVKC-------------------------------GYLDGARKLFDEIPEKNTVVWNSL 280
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
GY + + + +LL E + + D + +L ACA A + G +H + + G
Sbjct: 281 ICGYCQIGSLNEVIELLRE-MHLSNLKPDRFTVSGVLSACAQMGAFNLGNWVHRFAEKKG 339
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
+ D + + L+DMY+KCG + A +F ER++ +N +++ YA HG E AI LF
Sbjct: 340 I-WDVFIGTALIDMYAKCGFIGAARKVFDQMNERNVATWNAILSGYASHGQAESAIELFS 398
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRA 542
EM E G +PD++TF+A+L A H G VE G++YF+ M YKI P +HY CM+DL GRA
Sbjct: 399 EMRESGARPDSITFLAVLHACAHSGLVENGKQYFDLMLQYYKIPPRVEHYGCMVDLLGRA 458
Query: 543 NQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLA 602
L++A E +K + E + V+ G+ L+ C ++ N E+ A +++L + YV LA
Sbjct: 459 GLLQEARELIKMMVVEPNVVVWGALLSACSIHGNIEIGEWAAHHMIKLNAMDGGSYVILA 518
Query: 603 NVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
N+YA+ + + +R+ M + GCS + + +H F V D HP++ IYSVL
Sbjct: 519 NLYASAQRFNRVKAVREMMVEKGICKSHGCSMIEIGDVVHEFVVADKMHPRSEEIYSVL 577
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 156/388 (40%), Gaps = 66/388 (17%)
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
T S L L N+ +Q+HA + +S + F ++ +I+ + C + A +VF
Sbjct: 5 TPKSVLALIETCTNIQQLKQIHAKSIISSLSYTQFIITKIINSFLSHACLDYATQVF--- 61
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
Q + D +N +I Y + + +
Sbjct: 62 ------------------------------NQTQEPDGFIYNAMIRAYSSSQTPCVAISI 91
Query: 247 FVRMGE-NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
+ +M + +++T+ AC V+ KE+H +++ G + F+ S +++ Y
Sbjct: 92 YNKMRACQNILGDKYTYPFVFKACASQFAVEKGKEVHGVIVRIGYELDGFLQSSLLNFYM 151
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
C G + A++ FD K+VV W AL +G
Sbjct: 152 VC-------------------------------GEIGNAQQVFDEFDAKDVVFWNALITG 180
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR-MGVQ 424
Y + F + E V + V + ++ L+ AC L G+ IH Y+++ M ++
Sbjct: 181 YARQGMVLDSFGVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKDMVLR 240
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
KL + L+++Y KCG + A +F E++ V++N +I Y G + I L EM
Sbjct: 241 EGVKLEAALINLYVKCGYLDGARKLFDEIPEKNTVVWNSLICGYCQIGSLNEVIELLREM 300
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMG 512
+KPD T +LSA G+ +G
Sbjct: 301 HLSNLKPDRFTVSGVLSACAQMGAFNLG 328
>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
Length = 950
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 190/676 (28%), Positives = 334/676 (49%), Gaps = 72/676 (10%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
M+SL L I H +A T T + + I S+ + E+RK FD + + + SWN
Sbjct: 1 MKSLKL----ILH----RAYSTSTGVNNSFEISRLSRIGQINEARKFFDSLRYKAIGSWN 52
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
+I+S + ++AR +FD P +++V++N ++ GYI E +A +F E+
Sbjct: 53 SIVSGYFANGLPREARQMFDEMPERNIVSWNGLVSGYIKNRMIE-EARNVF-EI------ 104
Query: 121 IRMDEFTVTSTLNLCVKLLNVGF--GRQLHAFMVKTSNDASGFAV-SSLIDMYSKCRCYE 177
M E V S + + G +L + + N+ S + LID +
Sbjct: 105 --MPERNVVSWTAMVKGYVQEGMVVEAELLFWRMPERNEVSWTVMFGGLIDGGR----ID 158
Query: 178 EACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQN 237
+A ++++ + ++++ M+ CREG ++ A + F E N ++W T+I+GY QN
Sbjct: 159 DARKLYDMMPGK-DVVASTNMIGGLCREGRVDEAREIFDEMRERN-VITWTTMITGYGQN 216
Query: 238 GDAEEGLKLFVRMGENG-VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFV 296
+ KLF M E V W LS G I +
Sbjct: 217 KRVDVARKLFEVMPEKTEVSWTSMLLGYTLS---------------------GRIED--- 252
Query: 297 SSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNV 356
AE + ++ + ++MIV G + +ARR FD + +++
Sbjct: 253 ----------------AEEFFEVMPMKPVIACNAMIVALGEVGEIVKARRVFDQMEDRDN 296
Query: 357 VVWTALFSGY-VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIH 415
W + Y K EAL +L ++ + ++GV L+ +L CA A+L G+++H
Sbjct: 297 ATWRGMIKAYERKGFELEAL-ELFAQ-MQRQGVRPSFPSLISILSVCATLASLQYGRQVH 354
Query: 416 AYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEE 475
A+++R D + S L+ MY KCG + A+++F F +D++++N +I+ YA HG E
Sbjct: 355 AHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGE 414
Query: 476 KAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACM 535
+A+ +F EM G P+ VT +AIL+A + G +E G + F SM + + ++P +HY+C
Sbjct: 415 EALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCT 474
Query: 536 IDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNK 595
+D+ GRA +++KA+E + S+ + DA + G+ L C+ + +LA A +KL +E N
Sbjct: 475 VDMLGRAGKVDKAMELINSMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFEIEPENA 534
Query: 596 ARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDV-SHPKT 654
Y+ L+++ A+ W ++ +RK MR ++F GCSW+ V ++H+FT G + +HP+
Sbjct: 535 GPYILLSSINASRSKWGDVAEMRKNMRTKNVSKFPGCSWIEVGKKVHMFTRGGIRNHPEQ 594
Query: 655 NAIYSVLAIFTGELYE 670
I +L G L E
Sbjct: 595 AMILMMLEKTDGLLRE 610
>gi|325260825|gb|ADZ04643.1| hypothetical protein [Oryza punctata]
Length = 674
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 186/640 (29%), Positives = 306/640 (47%), Gaps = 61/640 (9%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLV 88
N L+ Y + LR+++ LFD+MP R+V SW +++A DL AR +FD P ++
Sbjct: 42 NALLTAYGRRGRLRDAQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMPRRNAP 101
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQ-- 146
++N++L Y+ A A LF +M + + S + L G R+
Sbjct: 102 SWNALLSVYLRAA-RPRAAHALFYKMPAKN---------AVSYGAIISGLAKAGMLREAE 151
Query: 147 -LHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
++ M + D G ++L+ Y + A RVFEG T ++IS +AMV C+
Sbjct: 152 LVYEEMPQQWRDPVG--SNALMAGYLRVGELAMALRVFEGMTVR-DVISWSAMVDGLCKH 208
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASA 265
G + A + F PE VSW ++I GYV+ G +GL LF+ M GV+ N T +
Sbjct: 209 GSVSEARRVFDAMPE-RSVVSWTSMIRGYVKRGMCSDGLLLFLNMRREGVQVNATTLSVV 267
Query: 266 LSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAES---------- 315
L AC G + +IH+ ++ G + F+ ++ +Y + M A+
Sbjct: 268 LDACAGASLAREGIQIHNLIISMGFELDIFLGDSVIIMYSRFGWMADAQRAFNCMQQKDI 327
Query: 316 ---------------------MLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
+ L +++ S +SM+VG++ +G M E+ F+ + K
Sbjct: 328 VSWNSLITGYVQHDMVEEAHVLFKLMPQKDAVSWTSMVVGFANRGWMRESVELFEQMPVK 387
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEF-----VTKEGVVTDALILVILLGACALQAALH 409
+VV WTA+ S ++ D LS +++EG + + LL A A A L+
Sbjct: 388 DVVAWTAIISSFITNG------DYLSAVRWFCRMSQEGCKPNTITFSCLLSALASLAMLN 441
Query: 410 PGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYA 469
G++ HAY + MG D + ++L+ MY+KCG + A +F + L+ N MI +
Sbjct: 442 QGRQAHAYSINMGWVFDSAVHTSLISMYAKCGRLAEAHHVFSSISNPSLIAINSMITAFV 501
Query: 470 HHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPET 529
HG E A+ LF +M G KP+ VTF+ IL+ G V+ G YF SM Y + P
Sbjct: 502 QHGFAEDALKLFTKMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESMRPVYGVEPNP 561
Query: 530 DHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLR 589
+HY CM+DL GRA L +A+E + S+P + + + L+ L+ N A A +KLL
Sbjct: 562 EHYTCMVDLLGRAGLLAEALEMINSMPQNDHSDAWAALLSASSLHSNLAFAKIAAQKLLE 621
Query: 590 LEGNNKARYVQLANVYAAEG-NWAEMGRIRKQMRGMKGNR 628
+ + Y L+ ++++ G + EM ++ Q+ M R
Sbjct: 622 KDPYDATAYTVLSKMFSSAGMEYEEMQKV-VQLSNMASKR 660
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 125/293 (42%), Gaps = 63/293 (21%)
Query: 7 KEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISAC 66
+E + H I G L + +I +YS+ + ++++ F+ M ++++ SWN++I+
Sbjct: 278 REGIQIHNLIISMGFELDIFLGDSVIIMYSRFGWMADAQRAFNCMQQKDIVSWNSLITGY 337
Query: 67 IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSAD-------- 118
++ +++A LF P KD V++ SM+ G+ N G+ ++++LF +M D
Sbjct: 338 VQHDMVEEAHVLFKLMPQKDAVSWTSMVVGFAN-RGWMRESVELFEQMPVKDVVAWTAII 396
Query: 119 ---------------------EHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSND 157
E + + T + L+ L + GRQ HA+ +
Sbjct: 397 SSFITNGDYLSAVRWFCRMSQEGCKPNTITFSCLLSALASLAMLNQGRQAHAYSINMGWV 456
Query: 158 ASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWR 217
+SLI MY+KC EA VF + +LI+ N+M+ A
Sbjct: 457 FDSAVHTSLISMYAKCGRLAEAHHVFSSISNP-SLIAINSMITA---------------- 499
Query: 218 QPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACC 270
+VQ+G AE+ LKLF +M G + N TF L+ C
Sbjct: 500 ----------------FVQHGFAEDALKLFTKMQNAGYKPNHVTFLGILTGCA 536
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV 383
N +++++ Y +G + +A+ FD + ++V+ WTAL + Y + + + +
Sbjct: 37 NRAHLNALLTAYGRRGRLRDAQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMP 96
Query: 384 TKEGVVTDALILVILLGACALQAAL----HPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
+ +AL+ V L A A P K +Y +IS L +K
Sbjct: 97 RRNAPSWNALLSVYLRAARPRAAHALFYKMPAKNAVSY---------GAIISGL----AK 143
Query: 440 CGNMTYAEIIFQNFIE--RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFV 497
G + AE++++ + RD V N ++A Y G A+ +FE M + D +++
Sbjct: 144 AGMLREAELVYEEMPQQWRDPVGSNALMAGYLRVGELAMALRVFEGMTVR----DVISWS 199
Query: 498 AILSAFRHCGSVEMGEKYFNSMT 520
A++ GSV + F++M
Sbjct: 200 AMVDGLCKHGSVSEARRVFDAMP 222
>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Vitis vinifera]
Length = 610
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 160/538 (29%), Positives = 270/538 (50%), Gaps = 34/538 (6%)
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L C + + G++LH ++KT D ++LI+MY KC
Sbjct: 10 LQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKC------------------ 51
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM- 250
G ++ AL F + P D +SW ++++ Q L +F M
Sbjct: 52 --------------GLIQDALNLFNQLPH-RDPISWASILTANNQANLPHLTLSMFPAMF 96
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
++G++ + + FA + AC L +K K++H+ + + + + V S +VD+Y KC
Sbjct: 97 KQDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDVVKSSLVDMYAKCGLP 156
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
+ + +NS S ++MI GY+ G +A + F + KN++ WTAL SG V++
Sbjct: 157 DIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSG 216
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
N F L E +K + D IL ++GA A A L GK+IH ++ +G + +
Sbjct: 217 NWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVS 276
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+ LVDMY+KC ++ A+ IF ++RD+V + +I A HG E+A+ L+ ML G+K
Sbjct: 277 NALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLK 336
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
P+ VTFV ++ A H G V G +FNSM DY I+P HY C++DL R+ LE+A
Sbjct: 337 PNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAEN 396
Query: 551 FMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGN 610
+K++P + D + L+ C +RN + + LL L+ + + Y+ L+N+YA+
Sbjct: 397 LIKAMPFKPDEATWAALLSACNHHRNTLIGIRVADHLLSLKPEDPSTYILLSNIYASAAM 456
Query: 611 WAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
W + ++R+ M M+ + G S + + E +F G+ SHP I+ +L E+
Sbjct: 457 WESVSKVRRLMAAMEVKKEPGYSCIVLGKESQVFLAGETSHPAKEEIFGLLEELDAEM 514
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 132/564 (23%), Positives = 250/564 (44%), Gaps = 83/564 (14%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
+S + + L CH+ IK G+ +N LI++Y K L++++ LF+++P R+ SW +
Sbjct: 17 QSPPIGKKLHCHI--IKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDPISWAS 74
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
I++A ++ + PH L + +M ++ D L
Sbjct: 75 ILTANNQA-----------NLPHLTLSMFPAM---------FKQDGL------------- 101
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+ D + + C L + G+Q+HA + + SSL+DMY+KC +
Sbjct: 102 QPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRV 161
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
VF+ + + N IS AM++ + G A++ F + P + + +SW LISG VQ+G+
Sbjct: 162 VFDSISSK-NSISWTAMISGYAQSGRKLDAIQLFQKMP-VKNLLSWTALISGLVQSGNWV 219
Query: 242 EGLKLFVRMGENGVRW-NEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
+ LF+ M G+ + +S + A L + K+IH V+ G S+ FVS+ +
Sbjct: 220 DSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNAL 279
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
VD+Y KC ++ A+ + R+ S +S+IVG + G EEA ++ +
Sbjct: 280 VDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAEEALSLYNRMLS------- 332
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE-IHAYIL 419
G+ + + V L+ AC+ + G+ ++ I
Sbjct: 333 -------------------------TGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIK 367
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKAI 478
G+ + + L+D+ S+ G++ AE + + + D + +++ HH + I
Sbjct: 368 DYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNHHRNTLIGI 427
Query: 479 LLFEEMLEKGIKP-DAVTFVAILSAFRHCGSVEMGEKYFNSMTA-DYKISPETDHYACMI 536
+ + +L +KP D T++ + + + E K M A + K P Y+C++
Sbjct: 428 RVADHLLS--LKPEDPSTYILLSNIYASAAMWESVSKVRRLMAAMEVKKEPG---YSCIV 482
Query: 537 DLYGRANQLEKAIEFMKSIPTEED 560
G+ +Q+ A E S P +E+
Sbjct: 483 --LGKESQVFLAGE--TSHPAKEE 502
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 100/232 (43%), Gaps = 12/232 (5%)
Query: 395 LVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFI 454
LV L ACA + GK++H +I++ G+ K L + L++MY KCG + A +F
Sbjct: 6 LVYQLQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLP 65
Query: 455 ERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK-GIKPDAVTFVAILSAFRHCGSVEMGE 513
RD + + ++ + +F M ++ G++PD F ++ A G+++ G+
Sbjct: 66 HRDPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGK 125
Query: 514 KYFNSMTADYKISPETDH---YACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNV 570
+ + A + +SP +D + ++D+Y + + SI ++
Sbjct: 126 Q----VHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGY 181
Query: 571 CRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMR 622
+ R +A + ++ N + L + GNW + + +MR
Sbjct: 182 AQSGRKL----DAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMR 229
>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 179/557 (32%), Positives = 280/557 (50%), Gaps = 30/557 (5%)
Query: 116 SADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRC 175
D H+ F TL L R LHA + F SSL+ Y +
Sbjct: 17 PPDPHLLPTAFKSCPTLPL---------ARALHAVAEVSGLARDPFVASSLLHAYLRLGT 67
Query: 176 YEEACRVFEGCTE-EVNLISKNAMVAACCREGEMEMALKTFWRQPEL--------NDAVS 226
A +F+G + ++ +A+VAA G+ E A WR E + ++
Sbjct: 68 TGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGA----WRLLEEMRRDGGVEPNVIT 123
Query: 227 WNTLISGYVQNGDAEEGLKLFVRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWV 285
WN L+SG ++G A + + M GE +R + + ALSA + V +++H +
Sbjct: 124 WNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYA 183
Query: 286 LKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEAR 345
+K G ++ V + ++D+Y KC + + S +++I G S + EA
Sbjct: 184 VKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEAL 243
Query: 346 RHF----DSLTEKNVVVWTALFSGYVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLG 400
R F D E NVV WT++ + V+ ++ EA+ + E + +G +++ + +L
Sbjct: 244 RLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAV-EFFRE-MQAQGTEPNSVTIPCVLP 301
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL 460
A A AAL G+ H + LR G D + S LVDMY+KCG + A IIF + R++V
Sbjct: 302 AFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVS 361
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
+N MI YA +G A+ +F ML+ KPD VTF +L+A G E G YF M
Sbjct: 362 WNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMH 421
Query: 521 ADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELA 580
+Y +SP +HYACM+ L GRA +L++A + + +P E DA I GS L CR++ N +LA
Sbjct: 422 NEYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLA 481
Query: 581 GEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHE 640
A EKL LE N YV L+N+YA++ W + R+R+ M+ + + GCSW+ ++++
Sbjct: 482 EVAAEKLFHLEPENAGNYVLLSNIYASKKMWDRVNRVREMMKDVGLKKEKGCSWIEIKNK 541
Query: 641 IHIFTVGDVSHPKTNAI 657
+H+ GD SHP AI
Sbjct: 542 VHMLLAGDDSHPMMTAI 558
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 148/580 (25%), Positives = 247/580 (42%), Gaps = 55/580 (9%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEM--PERNVFSWN 60
+L L AL H A +GL + L+H Y + +R LFD M P+R V W+
Sbjct: 32 TLPLARAL--HAVAEVSGLARDPFVASSLLHAYLRLGTTGNARALFDGMPRPQRTVVGWS 89
Query: 61 TIISACIKSHDLKQARSLF-----DSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQ 115
+++A D + A L D +++T+N ++ G +N G DA+ M
Sbjct: 90 ALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSG-LNRSGRARDAVVALATMH 148
Query: 116 SADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRC 175
+ +R D V+ L+ + V G+QLH + VK A V++LIDMY KC
Sbjct: 149 -GEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTALIDMYGKCGQ 207
Query: 176 YEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFW----RQPELNDAVSWNTLI 231
E RVF+ + +++ S NA++A R ++ AL+ F R ELN VSW +++
Sbjct: 208 AAEVVRVFDE-SSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVELN-VVSWTSIV 265
Query: 232 SGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLI 291
+ VQNG E ++ F M G N T L A + + + H + L+ G +
Sbjct: 266 ACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGRSAHCFALRKGFL 325
Query: 292 SNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL 351
+ +VSS +VD+Y KC + A + RN S ++MI GY++ G A F S+
Sbjct: 326 HDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSM 385
Query: 352 ----TEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGV---VTDALILVILLGACAL 404
+ ++V +T L + +A E E + GV + +V LLG
Sbjct: 386 LKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYACMVTLLG---- 441
Query: 405 QAALHPGKEIHAY--ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFI---ERDLV 459
GK AY I M + D + +L+ GN+ AE+ + +
Sbjct: 442 ----RAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLAEVAAEKLFHLEPENAG 497
Query: 460 LYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSM 519
Y ++ YA ++ + E M + G+K + + C +E+ K +
Sbjct: 498 NYVLLSNIYASKKMWDRVNRVREMMKDVGLKKE-----------KGCSWIEIKNKVHMLL 546
Query: 520 TADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE 559
D D + M + + NQL + + +P+ +
Sbjct: 547 AGD-------DSHPMMTAIIEKINQLNIQMRKLGFVPSTD 579
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 176/557 (31%), Positives = 266/557 (47%), Gaps = 67/557 (12%)
Query: 106 DALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS 165
AL L+ +M + R + FT L C L G Q H + K F +
Sbjct: 23 QALSLYPQMLRHGD--RPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTG 80
Query: 166 LIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAV 225
LI MY K + A +VFE N S+ V
Sbjct: 81 LISMYCKGSLVDNARKVFEE-----NFHSRKL--------------------------TV 109
Query: 226 SWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWV 285
+N L+SGYV N + + LF +M E GV N T + AC N++ +H
Sbjct: 110 CYNALVSGYVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCST 169
Query: 286 LKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEAR 345
LK G S+ V + + +Y KC ++NYA+ +
Sbjct: 170 LKYGFDSDVSVVNCFITMYMKCGSVNYAQKL----------------------------- 200
Query: 346 RHFDSLTEKNVVVWTALFSGYVKAQNCEALFDL-LSEFVTKEGVVTDALILVILLGACAL 404
FD + K ++ W A+ SGY AQN A L L + GV D + LV +L +CA
Sbjct: 201 --FDEMPVKGLISWNAMVSGY--AQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCAN 256
Query: 405 QAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVM 464
A G E+ + G + L + L++MY++CGN+T A+ +F ER LV + +
Sbjct: 257 LGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAI 316
Query: 465 IACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYK 524
I Y HGH E A+ LF+EM+ GI+PD FV +LSA H G + G +YF M +Y+
Sbjct: 317 IGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQ 376
Query: 525 ISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAE 584
+ P +HY+CM+DL GRA +L++A ++S+P + D + G+ L C++++N ELA A
Sbjct: 377 LEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAF 436
Query: 585 EKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIF 644
E+++ LE N YV L+N+Y+ N + RIR M+ K + GCS+V ++ +H F
Sbjct: 437 ERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYVELKGRVHPF 496
Query: 645 TVGDVSHPKTNAIYSVL 661
VGD +H +++ IY VL
Sbjct: 497 IVGDRNHLQSDEIYRVL 513
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 117/491 (23%), Positives = 203/491 (41%), Gaps = 101/491 (20%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H Q K G LI +Y K +L+ +RK+F+E N S
Sbjct: 63 HGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEE----NFHS-------------- 104
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
K V YN+++ GY+ + +DA+ LF +M +E + ++ T+ +
Sbjct: 105 -----------RKLTVCYNALVSGYV-SNSKCSDAVLLFRQMN--EEGVPVNSVTLLGLI 150
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
CV +N+ G LH +K D+ V+ I MY KC A ++F+
Sbjct: 151 PACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFD-------- 202
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
EM +K +SWN ++SGY QNG A L+L+ M
Sbjct: 203 ----------------EMPVKGL---------ISWNAMVSGYAQNGLATNVLELYRNMDM 237
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
NGV + T LS+C L E+ + +G SNPF+++ ++++Y +C
Sbjct: 238 NGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARC----- 292
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
GN+ +A+ FD + E+ +V WTA+ GY +
Sbjct: 293 --------------------------GNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHG 326
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR-MGVQMDKKLIS 431
E L E + + G+ D V +L AC+ G E + R ++ + S
Sbjct: 327 EIAVQLFKEMI-RSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYS 385
Query: 432 TLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+VD+ + G + A+ + ++ I+ D ++ ++ H + E A L FE ++E ++
Sbjct: 386 CMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIE--LE 443
Query: 491 PDAVTFVAILS 501
P+ + + +LS
Sbjct: 444 PENIGYYVLLS 454
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 148/334 (44%), Gaps = 33/334 (9%)
Query: 224 AVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHS 283
+ WNT + + + L L+ +M +G R N TF AL +C L + H
Sbjct: 5 STPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHG 64
Query: 284 WVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEE 343
+ K G + PFV +G++ +YCK L+ R F E
Sbjct: 65 QITKVGCVFEPFVQTGLISMYCKGS---------LVDNARKVF----------------E 99
Query: 344 ARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACA 403
H LT V + AL SGYV C LL + +EGV +++ L+ L+ AC
Sbjct: 100 ENFHSRKLT----VCYNALVSGYVSNSKCSDAV-LLFRQMNEEGVPVNSVTLLGLIPACV 154
Query: 404 LQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNV 463
L G +H L+ G D +++ + MY KCG++ YA+ +F + L+ +N
Sbjct: 155 SPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNA 214
Query: 464 MIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMG-EKYFNSMTAD 522
M++ YA +G + L+ M G+ PD VT V +LS+ + G+ +G E F +
Sbjct: 215 MVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASG 274
Query: 523 YKISPETDHYACMIDLYGRANQLEKAIEFMKSIP 556
+ +P ++ +I++Y R L KA +P
Sbjct: 275 FTSNPFLNN--ALINMYARCGNLTKAQAVFDGMP 306
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 143/381 (37%), Gaps = 72/381 (18%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTI 62
+NL+ H +K G N I +Y K + ++KLFDEMP + + SWN +
Sbjct: 156 PINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAM 215
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
+S GY G + L+L+ M H
Sbjct: 216 VS-------------------------------GYAQ-NGLATNVLELYRNMDMNGVH-- 241
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
D T+ L+ C L G ++ M + ++ F ++LI+MY++C +A V
Sbjct: 242 PDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAV 301
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
F+G E VSW +I GY +G E
Sbjct: 302 FDGMPERT---------------------------------LVSWTAIIGGYGMHGHGEI 328
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKN-GLISNPFVSSGIV 301
++LF M +G+ + F LSAC E + +N L P S +V
Sbjct: 329 AVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMV 388
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGY-SLQGNMEEARRHFDSLTE---KNVV 357
D+ + + A++++ ++ ++ ++G + N+E A F+ + E +N+
Sbjct: 389 DLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIELEPENIG 448
Query: 358 VWTALFSGYVKAQNCEALFDL 378
+ L + Y A N + + +
Sbjct: 449 YYVLLSNIYSNANNSKGVLRI 469
>gi|15233292|ref|NP_188854.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273371|sp|Q9LIE7.1|PP246_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22150, chloroplastic; Flags: Precursor
gi|11994734|dbj|BAB03063.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|110739449|dbj|BAF01634.1| hypothetical protein [Arabidopsis thaliana]
gi|332643073|gb|AEE76594.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 820
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 187/621 (30%), Positives = 307/621 (49%), Gaps = 74/621 (11%)
Query: 46 KLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEA 105
KL DE +++F ++ IS + D++ +R +FDS +++ +N+M+ Y+ +
Sbjct: 242 KLGDEYV-KDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCL-V 299
Query: 106 DALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS 165
++++LF+E + E I DE T + L V GRQ H F+ K + V+S
Sbjct: 300 ESIELFLEAIGSKE-IVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNS 358
Query: 166 LIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAV 225
L+ MYS+C ++ VF E D V
Sbjct: 359 LMVMYSRCGSVHKSFGVFLSMRER---------------------------------DVV 385
Query: 226 SWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWV 285
SWNT+IS +VQNG +EGL L M + G + + T + LSA LRN + K+ H+++
Sbjct: 386 SWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFL 445
Query: 286 LKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEAR 345
++ G+ + E MN S +I YS G + ++
Sbjct: 446 IRQGI---------------QFEGMN-----------------SYLIDMYSKSGLIRISQ 473
Query: 346 RHFDS--LTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACA 403
+ F+ E++ W ++ SGY + + E F + + + ++ + +A+ + +L AC+
Sbjct: 474 KLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKML-EQNIRPNAVTVASILPACS 532
Query: 404 LQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNV 463
++ GK++H + +R + + + S LVDMYSK G + YAE +F ER+ V Y
Sbjct: 533 QIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTT 592
Query: 464 MIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADY 523
MI Y HG E+AI LF M E GIKPDA+TFVA+LSA + G ++ G K F M Y
Sbjct: 593 MILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVY 652
Query: 524 KISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEED-AVILGSFLNVCRLNRNAELAGE 582
I P ++HY C+ D+ GR ++ +A EF+K + E + A + GS L C+L+ ELA
Sbjct: 653 NIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAET 712
Query: 583 AEEKLLRLE-GNNKARY-VQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHE 640
E+L + + G N + Y V L+N+YA E W + ++R+ MR + G S + +
Sbjct: 713 VSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGY 772
Query: 641 IHIFTVGDVSHPKTNAIYSVL 661
++ F D HP ++ IY V+
Sbjct: 773 VNCFVSRDQEHPHSSEIYDVI 793
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/440 (24%), Positives = 208/440 (47%), Gaps = 57/440 (12%)
Query: 75 ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNL 134
AR LFD+ P V +N+++ G+I +AL + M+ D +T +STL
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFI-CNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKA 116
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
C + N+ G+ +H +++ ++S +SL++MY C
Sbjct: 117 CAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSC--------------------- 155
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
+ A C E ++ ++ + + V+WNTLIS YV+ G E + F M
Sbjct: 156 ---LNAPDCFEYDV---VRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRME 209
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
V+ + +F + A R++K A + +LK G D Y
Sbjct: 210 VKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLG------------DEY---------- 247
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEA 374
V++ F +SS I Y+ G++E +RR FDS E+N+ VW + YV+
Sbjct: 248 -------VKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVE 300
Query: 375 LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLV 434
+L E + + +V+D + ++ A + + G++ H ++ + ++ ++++L+
Sbjct: 301 SIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLM 360
Query: 435 DMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAV 494
MYS+CG++ + +F + ERD+V +N MI+ + +G +++ ++L EM ++G K D +
Sbjct: 361 VMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYI 420
Query: 495 TFVAILSAFRHCGSVEMGEK 514
T A+LSA + + E+G++
Sbjct: 421 TVTALLSAASNLRNKEIGKQ 440
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 9/201 (4%)
Query: 327 SISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKE 386
SI S + GN + AR+ FD++ + V+W + G++ N L + K
Sbjct: 41 SIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFI-CNNLPHEALLFYSRMKKT 99
Query: 387 GVVT--DALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
T DA L ACA L GK +H +++R + + ++L++MY C N
Sbjct: 100 APFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAP 159
Query: 445 ------YAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVA 498
+F N +++V +N +I+ Y G +A F M+ +KP V+FV
Sbjct: 160 DCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVN 219
Query: 499 ILSAFRHCGSVEMGEKYFNSM 519
+ A S++ ++ M
Sbjct: 220 VFPAVSISRSIKKANVFYGLM 240
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 167/541 (30%), Positives = 262/541 (48%), Gaps = 66/541 (12%)
Query: 130 STLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEE 189
S L C+ + G+QLHA + + L+++Y C A +F+
Sbjct: 80 SLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFD----- 134
Query: 190 VNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVR 249
R P+ N + WN LI GY NG E ++L+ +
Sbjct: 135 ---------------------------RIPKHNIFL-WNVLIRGYAWNGPYEAAVQLYYQ 166
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
M + G+ + TF L AC L ++ +EIH V++ G + FV + ++D+Y KC
Sbjct: 167 MFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKC-- 224
Query: 310 MNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA 369
G + AR FD + ++ V+W ++ + Y +
Sbjct: 225 -----------------------------GCVGSAREVFDKILVRDAVLWNSMLAAYSQN 255
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
+ +A L SE V T+A LV + A A AAL G+E+H R + K+
Sbjct: 256 GHPDACLSLCSEMVLTGLRPTEA-TLVTAISASADNAALPQGRELHGLSWRQEFESHDKV 314
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+ LVDMY+KCG++ A +F+ + +V +N MI YA HGH +A+ LFEEM +
Sbjct: 315 KTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEM-NRVA 373
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
KPD +TFV +LSA H G +E G +F +M DYKI P HY CM+DL G + +L++A
Sbjct: 374 KPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAY 433
Query: 550 EFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEG 609
+ + D+ + G+ LN C+++ N EL A E+L+ LE ++ YV L+N+YA G
Sbjct: 434 NLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAG 493
Query: 610 NWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELY 669
W + ++RK M + + CSW+ V++++H F GD SHP ++ IYS L G +
Sbjct: 494 KWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMK 553
Query: 670 E 670
E
Sbjct: 554 E 554
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 121/489 (24%), Positives = 199/489 (40%), Gaps = 86/489 (17%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H Q AG T+ +L+++Y + L +R LFD +P+ N+F WN +I
Sbjct: 98 HAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIR-------- 149
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
GY YEA A++L+ +M D + D FT L
Sbjct: 150 -----------------------GYAWNGPYEA-AVQLYYQM--FDYGLVPDNFTFPFVL 183
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C L + GR++H +V+T + F ++LIDMY+KC C A VF+
Sbjct: 184 KACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKIL----- 238
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+ DAV WN++++ Y QNG + L L M
Sbjct: 239 ----------------------------VRDAVLWNSMLAAYSQNGHPDACLSLCSEMVL 270
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G+R E T +A+SA + +E+H + S+ V + +VD+Y KC ++
Sbjct: 271 TGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRV 330
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL---TEKNVVVWTALFSGYVKA 369
A ++ GV+ S ++MI GY++ G+ EA F+ + + + + + + S
Sbjct: 331 ARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRVAKPDHITFVGVLSACSHG 390
Query: 370 QNCEA---LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY--ILRMGVQ 424
E F+ + + V +V LLG H G+ AY I++M V
Sbjct: 391 GLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLG--------HSGRLDEAYNLIMQMKVL 442
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIE---RDLVLYNVMIACYAHHGHEEKAILLF 481
D + L++ N+ EI + IE D Y ++ YA G E L
Sbjct: 443 PDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLR 502
Query: 482 EEMLEKGIK 490
+ M ++ +K
Sbjct: 503 KLMTDRRLK 511
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 133/287 (46%), Gaps = 33/287 (11%)
Query: 262 FASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKG 321
+AS L +C + +K K++H+ V G + +++ +V++YC C++++
Sbjct: 78 YASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLS---------- 127
Query: 322 VRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSE 381
AR FD + + N+ +W L GY EA L +
Sbjct: 128 ---------------------SARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQ 166
Query: 382 FVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
G+V D +L ACA +A+ G+EIH ++++ G + D + + L+DMY+KCG
Sbjct: 167 MF-DYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCG 225
Query: 442 NMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
+ A +F + RD VL+N M+A Y+ +GH + + L EM+ G++P T V +S
Sbjct: 226 CVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAIS 285
Query: 502 AFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
A ++ G + + ++ + ++D+Y + + A
Sbjct: 286 ASADNAALPQGRE-LHGLSWRQEFESHDKVKTALVDMYAKCGSVRVA 331
>gi|449463559|ref|XP_004149501.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
gi|449511944|ref|XP_004164096.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 566
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 180/656 (27%), Positives = 308/656 (46%), Gaps = 110/656 (16%)
Query: 17 IKAGLTLTTITTNQLIHIYSKHNLLRESRKLF-DEMPERNVFSWNTIISACIKSHDLKQA 75
+ +G + LI++YS+ N + E+ +F D ERNVF+
Sbjct: 2 VTSGFIHLPSSITSLINMYSRCNQMEEAVLVFRDPYHERNVFA----------------- 44
Query: 76 RSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLC 135
YN+++ G++ A G AD + + M+S + D+FT + C
Sbjct: 45 --------------YNAIIAGFV-ANGLAADGFQFYKRMRSVG--VMPDKFTFPCVVRAC 87
Query: 136 VKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISK 195
+ + V R++H + K + + F S+L++ Y K E+A +VFE
Sbjct: 88 CEFMEV---RKIHGCLFKMGLELNVFVGSALVNTYLKVDGTEDAEKVFE----------- 133
Query: 196 NAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGV 255
PE D V WN +I+GY + G + + +F RMGE G+
Sbjct: 134 ---------------------ELPE-RDVVLWNAMINGYTKIGHLNKAVVVFKRMGEEGI 171
Query: 256 RWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAES 315
+ T S LS + ++ + IH V K G S VS+ ++D+Y KC++
Sbjct: 172 SLSRFTTTSILSILTSMGDINNGRAIHGIVTKMGYSSCVAVSNALIDMYGKCKHT----- 226
Query: 316 MLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEAL 375
E+A F+ + EK++ W ++ S + + + +
Sbjct: 227 --------------------------EDALMIFEMINEKDLFSWNSIISAHEQCDDHDGT 260
Query: 376 FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM-----DKKLI 430
L + + V+ D + + +L AC+ AAL G+EIH Y++ G+ D L
Sbjct: 261 LRLFGKMLGSR-VLPDVITITAVLPACSHLAALMHGREIHGYMIVNGLGKNENGDDVLLN 319
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+ ++DMY+KCG M A+IIF +D+ +N+MI YA HG+ +A+ +F M E IK
Sbjct: 320 NAIMDMYAKCGCMKNADIIFDLMRNKDVASWNIMIMGYAMHGYGTEALDMFHRMCEAQIK 379
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
PD VTFV +LSA H G V G + M ++ + P +HY C+ID+ GRA L +A +
Sbjct: 380 PDVVTFVGVLSACSHAGFVHQGRSFLTRMELEFGVIPTIEHYTCIIDMLGRAGHLGEAYD 439
Query: 551 FMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNN--KARYVQLANVYAAE 608
+ IP E++ ++ + L CRL+ NAEL EK+ +LE + Y+ ++++Y
Sbjct: 440 LAQRIPLEDNLILWMALLGACRLHGNAELGNVVGEKITQLEPKHCGSGSYILMSSLYGVV 499
Query: 609 GNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIF 664
G + E +R+ M+ + GCSW+ ++ +++F++GD +H + NA+ + L F
Sbjct: 500 GRYEEALEVRRTMKEQNVKKTPGCSWIELKDGLYVFSMGDRTHHELNALINCLCGF 555
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 104/262 (39%), Gaps = 72/262 (27%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H K G + +N LI +Y K ++ +F+ + E+++FSWN+IISA + D
Sbjct: 198 HGIVTKMGYSSCVAVSNALIDMYGKCKHTEDALMIFEMINEKDLFSWNSIISAHEQCDD- 256
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
L+LF +M + + D T+T+ L
Sbjct: 257 -------------------------------HDGTLRLFGKMLGS--RVLPDVITITAVL 283
Query: 133 NLCVKLLNVGFGRQLHAFMV-----KTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
C L + GR++H +M+ K N ++++DMY+KC C + A +F+
Sbjct: 284 PACSHLAALMHGREIHGYMIVNGLGKNENGDDVLLNNAIMDMYAKCGCMKNADIIFD--- 340
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
+ +N D SWN +I GY +G E L +F
Sbjct: 341 -----LMRN-------------------------KDVASWNIMIMGYAMHGYGTEALDMF 370
Query: 248 VRMGENGVRWNEHTFASALSAC 269
RM E ++ + TF LSAC
Sbjct: 371 HRMCEAQIKPDVVTFVGVLSAC 392
>gi|125564656|gb|EAZ10036.1| hypothetical protein OsI_32340 [Oryza sativa Indica Group]
Length = 644
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 171/586 (29%), Positives = 282/586 (48%), Gaps = 41/586 (6%)
Query: 75 ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNL 134
AR LFD P D YNS++ Y N+ + +AL L M I +EFT+ L
Sbjct: 63 ARQLFDRIPDPDRFVYNSLIRAYCNSHCPQ-EALPLLRGM--IRRGILPNEFTLPFLLKA 119
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
C ++ H +VK F ++L+ Y+ ++ R F+ ++
Sbjct: 120 CARVQAWEHVMVTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFD------EMVD 173
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
+N VSWN++I+GY Q G+ E LF M G
Sbjct: 174 RNV---------------------------VSWNSMINGYAQAGNTREACSLFEGMRRQG 206
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
+ +E T S L AC N++ K +HS +L G + +++ +VD+Y KC ++ A
Sbjct: 207 LLADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILANALVDMYGKCGDLLMAH 266
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEA 374
+ + +N+ S +SM+ + + +++ AR F+ + EK+++ W A+ S YV+
Sbjct: 267 TCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSIISWNAMISCYVQGGRFHE 326
Query: 375 LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLV 434
DL + + G+ D L +L AC L GK IH I L ++L+
Sbjct: 327 ALDLYNR-MKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFHNPGVALFNSLL 385
Query: 435 DMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAV 494
DMY++CG + A +F ++++ +N +I A HG + A++ F M+ PD +
Sbjct: 386 DMYARCGQVDTAISLFSEMPSKNVISWNAIIGALAMHGRAQDALMFFRSMVSDAFPPDEI 445
Query: 495 TFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKS 554
TFVA+LSA H G +E G+ YF +M Y + P +HYACM+DL GR QL KA++ +K
Sbjct: 446 TFVALLSACNHGGLLEAGQYYFQAMRHVYNVKPGVEHYACMVDLLGRGGQLAKAVDLIKD 505
Query: 555 IPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEM 614
+P D V+ G+ L CR++ + ++ + ++LL LEG + +V ++N+ W +M
Sbjct: 506 MPMRPDVVVWGALLGACRIHGHIQIGKQVIKQLLELEGMSGGLFVLISNMLYETHQWEDM 565
Query: 615 GRIRKQMR--GMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
R+RK MR GMK N G S + IH + H ++ +Y
Sbjct: 566 KRLRKLMREWGMKKN--MGVSSIETNSNIHESGAEGIGHESSDDMY 609
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/491 (24%), Positives = 209/491 (42%), Gaps = 88/491 (17%)
Query: 7 KEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISAC 66
+ ++ H +K G N L+H Y+ L +SR+ FDEM +RNV SWN++I+
Sbjct: 127 EHVMVTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMINGY 186
Query: 67 IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEF 126
++ + ++A SLF+ + L+ DEF
Sbjct: 187 AQAGNTREACSLFEGMRRQGLLA----------------------------------DEF 212
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
T+ S L C N+ FG+ +H+ ++ ++L+DMY KC A F+
Sbjct: 213 TLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILANALVDMYGKCGDLLMAHTCFDMM 272
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
+ N +S +M+ A + ++ A F + PE +SWN +IS YVQ G E L L
Sbjct: 273 PFK-NAVSWTSMLCALAKRASIDAARDWFEQIPE-KSIISWNAMISCYVQGGRFHEALDL 330
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVS--SGIVDVY 304
+ RM G+ +E T A+ LSAC L ++ K IH + N NP V+ + ++D+Y
Sbjct: 331 YNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIRDN--FHNPGVALFNSLLDMY 388
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
+C ++ A S+ F + KNV+ W A+
Sbjct: 389 ARCGQVDTAISL-------------------------------FSEMPSKNVISWNAIIG 417
Query: 365 G---YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI-----HA 416
+ +AQ+ F + + D + V LL AC L G+ H
Sbjct: 418 ALAMHGRAQDALMFF----RSMVSDAFPPDEITFVALLSACNHGGLLEAGQYYFQAMRHV 473
Query: 417 YILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER-DLVLYNVMIACYAHHGHEE 475
Y ++ GV+ + +VD+ + G + A + ++ R D+V++ ++ HGH +
Sbjct: 474 YNVKPGVEH----YACMVDLLGRGGQLAKAVDLIKDMPMRPDVVVWGALLGACRIHGHIQ 529
Query: 476 KAILLFEEMLE 486
+ +++LE
Sbjct: 530 IGKQVIKQLLE 540
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 167/384 (43%), Gaps = 65/384 (16%)
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASA 265
G + A + F R P+ D +N+LI Y + +E L L M G+ NE T
Sbjct: 58 GGVWYARQLFDRIPD-PDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFL 116
Query: 266 LSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNS 325
L AC ++ + H V+K G + FV + ++ Y
Sbjct: 117 LKACARVQAWEHVMVTHGVVVKLGFVGQVFVGNALLHSYASA------------------ 158
Query: 326 FSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTK 385
G++ ++RR FD + ++NVV W ++ +GY +A N L E + +
Sbjct: 159 -------------GSLGDSRRFFDEMVDRNVVSWNSMINGYAQAGNTREACSLF-EGMRR 204
Query: 386 EGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTY 445
+G++ D LV LL AC+ + L GK +H+++L G ++D L + LVDMY KCG++
Sbjct: 205 QGLLADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILANALVDMYGKCGDLLM 264
Query: 446 AEII-------------------------------FQNFIERDLVLYNVMIACYAHHGHE 474
A F+ E+ ++ +N MI+CY G
Sbjct: 265 AHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSIISWNAMISCYVQGGRF 324
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC 534
+A+ L+ M G+ PD T A+LSA G + G+ + + ++ +P +
Sbjct: 325 HEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFH-NPGVALFNS 383
Query: 535 MIDLYGRANQLEKAIEFMKSIPTE 558
++D+Y R Q++ AI +P++
Sbjct: 384 LLDMYARCGQVDTAISLFSEMPSK 407
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 119/265 (44%), Gaps = 36/265 (13%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
NL+ + H + G + I N L+ +Y K L + FD MP +N SW +++
Sbjct: 226 NLEFGKLVHSHLLVRGCRIDLILANALVDMYGKCGDLLMAHTCFDMMPFKNAVSWTSMLC 285
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
A K + AR F+ P K ++++N+M+ Y+ G +AL L+ M+ + D
Sbjct: 286 ALAKRASIDAARDWFEQIPEKSIISWNAMISCYVQG-GRFHEALDLYNRMKLLG--LAPD 342
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
EFT+ + L+ C +L ++ G+ +H + ++ +SL+DMY++C
Sbjct: 343 EFTLAAVLSACGQLGDLASGKMIHDCIRDNFHNPGVALFNSLLDMYARC----------- 391
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
G+++ A+ F P N +SWN +I +G A++ L
Sbjct: 392 ---------------------GQVDTAISLFSEMPSKN-VISWNAIIGALAMHGRAQDAL 429
Query: 245 KLFVRMGENGVRWNEHTFASALSAC 269
F M + +E TF + LSAC
Sbjct: 430 MFFRSMVSDAFPPDEITFVALLSAC 454
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 122/271 (45%), Gaps = 6/271 (2%)
Query: 310 MNYAESMLLLKGVRNSFS-ISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
+N + L++ GV + S I + G + AR+ FD + + + V+ +L Y
Sbjct: 28 LNQLHAHLVVHGVDDVTSQILASYCALPAGGGVWYARQLFDRIPDPDRFVYNSLIRAYCN 87
Query: 369 AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK 428
+ + LL + + G++ + L LL ACA A H ++++G
Sbjct: 88 SHCPQEALPLLRGMI-RRGILPNEFTLPFLLKACARVQAWEHVMVTHGVVVKLGFVGQVF 146
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
+ + L+ Y+ G++ + F ++R++V +N MI YA G+ +A LFE M +G
Sbjct: 147 VGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMINGYAQAGNTREACSLFEGMRRQG 206
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
+ D T V++L A G++E G K +S + ++D+YG+ L A
Sbjct: 207 LLADEFTLVSLLFACSAEGNLEFG-KLVHSHLLVRGCRIDLILANALVDMYGKCGDLLMA 265
Query: 549 IEFMKSIPTEEDAVILGSFLNVCRLNRNAEL 579
+P ++AV S L C L + A +
Sbjct: 266 HTCFDMMPF-KNAVSWTSML--CALAKRASI 293
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 173/587 (29%), Positives = 286/587 (48%), Gaps = 82/587 (13%)
Query: 76 RSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH-IRMDEFTVTSTLNL 134
R + D SP LV + C ++ D + M + + H + D T + +
Sbjct: 15 RYVADPSP---LVNEFANFC-------HQWDLHRAMRAMDAMERHGVFADAITYSELIKC 64
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
C V G+++H + + F V++L++MY K EEA +F+
Sbjct: 65 CSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFD---------- 114
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
EM PE N VSW T+IS Y N ++ LK + M G
Sbjct: 115 --------------EM--------PERN-VVSWTTMISAY-SNKLNDKALKCLILMFREG 150
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
VR N T++S L AC GL N++ ++H ++K GL S+ FV S ++DVY K +++
Sbjct: 151 VRPNMFTYSSVLRACDGLPNLR---QLHCGIIKTGLESDVFVRSALIDVYSKWSDLD--- 204
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEA 374
N+ + FD + +++VVW ++ G+ + +
Sbjct: 205 ---------NALGV-------------------FDEMPTRDLVVWNSIIGGFAQNSDGNE 236
Query: 375 LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLV 434
+L + + G + D L +L AC A L G+++H ++L+ D L + L+
Sbjct: 237 ALNLFKR-MKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLKF--DQDLILNNALI 293
Query: 435 DMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAV 494
DMY KCG++ A F +E+D++ ++ M+A A +G+ +A+ LFE M E G +P+ +
Sbjct: 294 DMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYI 353
Query: 495 TFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKS 554
T + +L A H G VE G YF SM + + P +HY C+IDL GRA +L++A++ +
Sbjct: 354 TVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHE 413
Query: 555 IPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEM 614
+ E D+V + L CR++RN +LA A +K++ LE + Y+ L+N+YA W ++
Sbjct: 414 MECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELEPEDAGTYILLSNIYANTQRWEDV 473
Query: 615 GRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+RK M + GCSW+ V+ +IH+F +GD SHPK I L
Sbjct: 474 AEVRKTMTNRGIRKTPGCSWIEVDKQIHVFILGDTSHPKIEEIVQRL 520
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 122/489 (24%), Positives = 223/489 (45%), Gaps = 83/489 (16%)
Query: 18 KAGLTLTTITTNQLIHIYSKHNLLRESRK----LFDEMPERNVFSWNTIISACIKSHDLK 73
+ G+ IT ++LI S ++E ++ +F + E +F NT+++ +K + L+
Sbjct: 48 RHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLE 107
Query: 74 QARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLN 133
+A LFD P +++V++ +M+ Y N ALK I M E +R + FT +S L
Sbjct: 108 EAEDLFDEMPERNVVSWTTMISAYSNK--LNDKALKCLILMFR--EGVRPNMFTYSSVLR 163
Query: 134 LCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLI 193
C L N+ RQLH ++KT ++ F S+LID+YSK + A VF+
Sbjct: 164 ACDGLPNL---RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFD--------- 211
Query: 194 SKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGEN 253
EM + D V WN++I G+ QN D E L LF RM
Sbjct: 212 ---------------EMPTR---------DLVVWNSIIGGFAQNSDGNEALNLFKRMKRA 247
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA 313
G ++ T S L AC GL ++ +++H VLK + +++ ++D+YCKC
Sbjct: 248 GFLADQATLTSVLRACTGLALLELGRQVHVHVLK--FDQDLILNNALIDMYCKC------ 299
Query: 314 ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE 373
G++E+A F + EK+V+ W+ + +G +
Sbjct: 300 -------------------------GSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSR 334
Query: 374 ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM-GVQMDKKLIST 432
+L E + + G + + ++ +L AC+ + G + ++ GV ++
Sbjct: 335 QALELF-ESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGC 393
Query: 433 LVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
L+D+ + G + A ++I + E D V + ++ H + + AI ++++E ++P
Sbjct: 394 LIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIE--LEP 451
Query: 492 -DAVTFVAI 499
DA T++ +
Sbjct: 452 EDAGTYILL 460
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 104/257 (40%), Gaps = 69/257 (26%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H IK GL + LI +YSK + L + +FDEMP R++ WN+II +
Sbjct: 175 HCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQ---- 230
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
N++G E AL LF M+ A D+ T+TS L
Sbjct: 231 --------------------------NSDGNE--ALNLFKRMKRAG--FLADQATLTSVL 260
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C L + GRQ+H ++K D ++LIDMY KC E+A F E+ ++
Sbjct: 261 RACTGLALLELGRQVHVHVLKFDQDL--ILNNALIDMYCKCGSLEDANSAFSRMVEK-DV 317
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
IS + MVA G QNG + + L+LF M E
Sbjct: 318 ISWSTMVA--------------------------------GLAQNGYSRQALELFESMKE 345
Query: 253 NGVRWNEHTFASALSAC 269
+G R N T L AC
Sbjct: 346 SGSRPNYITVLGVLFAC 362
>gi|147826737|emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera]
Length = 1301
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 159/518 (30%), Positives = 279/518 (53%), Gaps = 15/518 (2%)
Query: 140 NVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMV 199
N+G RQ+ M + +S+I Y K C++E+ R+F G N++S N+M+
Sbjct: 62 NIGAARQVFDEMPHRDT----VSWNSIITGYWKNGCFDESKRLF-GLMPTKNVVSWNSMI 116
Query: 200 AACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNE 259
A C + ++ A + F P+ N A SWN +ISG V+ EE +LF M R N
Sbjct: 117 AGCIEDERIDEAWQYFQAMPQRNTA-SWNAMISGLVRYDRVEEASRLFEEMP----RRNV 171
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLL 319
++ + + + ++ A+ + + + + ++S + SG Y + + AE++
Sbjct: 172 ISYTAMVDGYAKIGEIEQARALFNCMPQKNVVSWTVMISG----YVENGKFDEAENLFEQ 227
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLL 379
+N ++++MI GY +G ++A+ FD + +++ W A+ +GY + + E L
Sbjct: 228 MPDKNIVAMTAMITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLH 287
Query: 380 SEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
S+ + K G+ D L+ +L AC+ A+L G++ H +L+ G + + + L+ MY K
Sbjct: 288 SQML-KMGMQPDHSTLISVLTACSSLASLQEGRKTHVLVLKSGYESRISICNALITMYCK 346
Query: 440 CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
CG++ +E+ F+ D+V +N MIA +A HG ++A+ F EM ++PD +TF+++
Sbjct: 347 CGSILDSELAFRQIDHPDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSL 406
Query: 500 LSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE 559
LSA H G V +FNSM YKI +H+AC++D+ R Q+EKA + ++ +P E
Sbjct: 407 LSACGHAGKVHESLNWFNSMIXSYKIVXRPEHFACLVDILSRGGQVEKAYKIIQEMPFEA 466
Query: 560 DAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRK 619
D I G+ L C ++ N +L A +K++ LE N YV L+N+YAA G W E+ R+R
Sbjct: 467 DCGIWGALLAACHVHLNVKLGELAAKKIVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRG 526
Query: 620 QMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
MR + SW+ +++++H F D SHP+ + I
Sbjct: 527 LMREQGVKKQPAYSWMEIDNKVHFFLGDDASHPEIHRI 564
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 116/452 (25%), Positives = 212/452 (46%), Gaps = 54/452 (11%)
Query: 25 TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPH 84
T++ N +I Y K+ ES++LF MP +NV SWN++I+ CI+ + +A F + P
Sbjct: 78 TVSWNSIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYFQAMPQ 137
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
++ ++N+M+ G + + E +A +LF EM R + + T+ ++ K+ +
Sbjct: 138 RNTASWNAMISGLVRYDRVE-EASRLFEEMP------RRNVISYTAMVDGYAKIGEIEQA 190
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
R L F + + V +I Y + ++EA +FE ++ N+++ AM+ C+
Sbjct: 191 RAL--FNCMPQKNVVSWTV--MISGYVENGKFDEAENLFEQMPDK-NIVAMTAMITGYCK 245
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFAS 264
EG+ + A K + Q D SWN +I+GY QNG EE LKL +M + G++ + T S
Sbjct: 246 EGKTDKA-KILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLIS 304
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
L+AC L +++ ++ H VLK+G S + + ++ +YCKC
Sbjct: 305 VLTACSSLASLQEGRKTHVLVLKSGYESRISICNALITMYCKC----------------- 347
Query: 325 SFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFD-LLSEF- 382
G++ ++ F + +VV W A+ + + + +D L+ F
Sbjct: 348 --------------GSILDSELAFRQIDHPDVVSWNAMIAAFAR----HGFYDRALASFG 389
Query: 383 -VTKEGVVTDALILVILLGACALQAALHPGKE-IHAYILRMGVQMDKKLISTLVDMYSKC 440
+ V D + + LL AC +H ++ I + + + LVD+ S+
Sbjct: 390 EMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIXSYKIVXRPEHFACLVDILSRG 449
Query: 441 GNMTYAEIIFQNF-IERDLVLYNVMI-ACYAH 470
G + A I Q E D ++ ++ AC+ H
Sbjct: 450 GQVEKAYKIIQEMPFEADCGIWGALLAACHVH 481
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 120/279 (43%), Gaps = 40/279 (14%)
Query: 321 GVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA---QNCEALFD 377
++ ++ + I + GN+ AR+ FD + ++ V W ++ +GY K + LF
Sbjct: 43 STQDVYAFNVQIGNLARAGNIGAARQVFDEMPHRDTVSWNSIITGYWKNGCFDESKRLFG 102
Query: 378 LLSEFVTKEGVVTDALILVILLGACALQAALH----PGKEIHAY---------------I 418
L+ TK V +++I + +A + P + ++
Sbjct: 103 LMP---TKNVVSWNSMIAGCIEDERIDEAWQYFQAMPQRNTASWNAMISGLVRYDRVEEA 159
Query: 419 LRMGVQMDKKLI---STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEE 475
R+ +M ++ + + +VD Y+K G + A +F ++++V + VMI+ Y +G +
Sbjct: 160 SRLFEEMPRRNVISYTAMVDGYAKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFD 219
Query: 476 KAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACM 535
+A LFE+M +K I V A+++ + G + + F+ + S + M
Sbjct: 220 EAENLFEQMPDKNI----VAMTAMITGYCKEGKTDKAKILFDQIPCRDLAS-----WNAM 270
Query: 536 IDLYGRANQLEKAIEF---MKSIPTEEDAVILGSFLNVC 571
I Y + E+A++ M + + D L S L C
Sbjct: 271 ITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTAC 309
>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 815
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 173/642 (26%), Positives = 307/642 (47%), Gaps = 112/642 (17%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H IK GL + + L+ +YS+ E+ ++F + E +V + +IS C HD+
Sbjct: 275 HASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMIS-CFDRHDM 333
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+AL LF++M ++ + +
Sbjct: 334 AW-------------------------------EALDLFVKMSGMG--VKPNHYIFVGIA 360
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAV-----SSLIDMYSKCRCYEEACRVFEGCT 187
+ + + R +HA++VK SGFA+ ++++MY K ++A F+
Sbjct: 361 GVASRTGDANLCRSVHAYIVK-----SGFAMLKGVGDAILNMYVKVGAVQDATVTFD--- 412
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
+P D SWNT++S + + E+GL++F
Sbjct: 413 ---------------------------LIHEP---DTFSWNTILSAFYSGSNCEQGLRIF 442
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
+M G N++T+ S L C L N++ ++H+ +LK+GL ++ VS +VD+
Sbjct: 443 KQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRMLVDM---- 498
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
YA+S F+ + ++ F+ L E++ WT + SGY
Sbjct: 499 ----YAQS--------GCFTSACLV---------------FEQLKERDAFSWTVIMSGYA 531
Query: 368 KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDK 427
K + E + + + +E + L + L C+ A+L G ++H++ ++ G +
Sbjct: 532 KTEEAEKVVEYFRSML-RENIRPSDATLAVSLSVCSDMASLGSGLQLHSWAIKSG--WNS 588
Query: 428 KLIS-TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
++S LVDMY KCGN+ AE++F RD V +N +I Y+ HGH KA+ F++M++
Sbjct: 589 SVVSGALVDMYVKCGNIADAEMLFHESETRDQVAWNTIICGYSQHGHGYKALDAFKQMVD 648
Query: 487 KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLE 546
+G +PD +TFV +LSA H G + G KYF S+++ Y I+P +HYACM+D+ +A +L
Sbjct: 649 EGKRPDGITFVGVLSACSHAGLLNEGRKYFKSLSSIYGITPTMEHYACMVDILSKAGRLV 708
Query: 547 KAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYA 606
+A + +P D+ I + L CR++RN E+A A E+L LE ++ + + L+N+YA
Sbjct: 709 EAESLINQMPLAPDSSIWRTILGACRIHRNIEIAERAAERLFELEPHDASSSILLSNIYA 768
Query: 607 AEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGD 648
G W+++ R+R + + GCSW+ + +IH+F D
Sbjct: 769 DLGRWSDVTRVRNILLDHGVKKEPGCSWIEINGQIHMFLSQD 810
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 165/369 (44%), Gaps = 67/369 (18%)
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
G++LHA +++++ F + SL++MY KC +A RVF+G
Sbjct: 69 GQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHR-------------- 114
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
D V+W +IS + GD+++ L +F RM + G+ N T A
Sbjct: 115 -------------------DIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLA 155
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
S L AC G + K ++H V+K + +P+V S +V+ Y C ++ AE++LL
Sbjct: 156 SVLKACSGGSHSKFTHQVHGQVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLL----- 210
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV 383
L E++ V W AL +GY + + + ++ + V
Sbjct: 211 --------------------------GLPERSDVSWNALLNGYARHGDYRRVMIIIEKLV 244
Query: 384 TKEGVVTDALILVILLGACALQAALHP-GKEIHAYILRMGVQMDKKLISTLVDMYSKCGN 442
++ + +L C ++ L G+ +HA +++ G++ D L S LV+MYS+C +
Sbjct: 245 ASGDEISKYTLPTVL--KCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLS 302
Query: 443 MTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
A +F E D+V + MI+C+ H +A+ LF +M G+KP+ FV I
Sbjct: 303 AEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGV 362
Query: 503 FRHCGSVEM 511
G +
Sbjct: 363 ASRTGDANL 371
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 133/574 (23%), Positives = 222/574 (38%), Gaps = 116/574 (20%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACI 67
E L H A++ T+ Q +H +L + F +++++
Sbjct: 48 EELRLHAAALQDCAVRRTLRRGQELHA-----------RLLRSALHPDTFLLDSLLNMYC 96
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFT 127
K L AR +FD PH+D+V + +M+ + A G AL +F M E I + FT
Sbjct: 97 KCGRLVDARRVFDGMPHRDIVAWTAMISAH-TAAGDSDQALDMFARMNQ--EGIAPNGFT 153
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
+ S L C + F Q+H +VK + + SSL++ Y+ C
Sbjct: 154 LASVLKACSGGSHSKFTHQVHGQVVKLNGLDDPYVGSSLVEAYTSC-------------- 199
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
GE++ A PE +D VSWN L++GY ++GD + +
Sbjct: 200 ------------------GELDAAETVLLGLPERSD-VSWNALLNGYARHGDYRRVMIII 240
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
++ +G +++T + L C L K + +H+ V+K GL ++ ++S +V++Y +C
Sbjct: 241 EKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRC 300
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVV---------- 357
+ A + + + S+MI + EA F ++ V
Sbjct: 301 LSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIA 360
Query: 358 -----------------------------VWTALFSGYVK---AQNCEALFDLLSEFVTK 385
V A+ + YVK Q+ FDL+ E T
Sbjct: 361 GVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDTF 420
Query: 386 ---------------------------EGVVTDALILVILLGACALQAALHPGKEIHAYI 418
EG + V +L C L G ++HA I
Sbjct: 421 SWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACI 480
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
L+ G+Q D + LVDMY++ G T A ++F+ ERD + V+++ YA EK +
Sbjct: 481 LKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSGYAKTEEAEKVV 540
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMG 512
F ML + I+P T LS S+ G
Sbjct: 541 EYFRSMLRENIRPSDATLAVSLSVCSDMASLGSG 574
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 166/354 (46%), Gaps = 45/354 (12%)
Query: 263 ASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGV 322
A+AL C R ++ +E+H+ +L++ L + F+ ++++YCKC
Sbjct: 54 AAALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKC--------------- 98
Query: 323 RNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF 382
G + +ARR FD + +++V WTA+ S + A + + D+ +
Sbjct: 99 ----------------GRLVDARRVFDGMPHRDIVAWTAMISAHTAAGDSDQALDMFAR- 141
Query: 383 VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGN 442
+ +EG+ + L +L AC+ + ++H ++++ D + S+LV+ Y+ CG
Sbjct: 142 MNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQVVKLNGLDDPYVGSSLVEAYTSCGE 201
Query: 443 MTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
+ AE + ER V +N ++ YA HG + +++ E+++ G + T +L
Sbjct: 202 LDAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMIIIEKLVASGDEISKYTLPTVLKC 261
Query: 503 FRHCGSVEMGEKYFNSMTADYKISPETDHY--ACMIDLYGRANQLEKAIEFMKSIPTEED 560
G + G+ S+ K ETD+ +C++++Y R E+A E I +E
Sbjct: 262 CMELGLAKYGQSVHASVI---KRGLETDNVLNSCLVEMYSRCLSAEEAYEVF--IRIDEP 316
Query: 561 AVILGSFLNVCRLNRNAELAGEAEEKLLRLEG----NNKARYVQLANVYAAEGN 610
V+ S + C +R+ ++A EA + +++ G N +V +A V + G+
Sbjct: 317 DVVHCSAMISC-FDRH-DMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTGD 368
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 147/353 (41%), Gaps = 72/353 (20%)
Query: 4 LNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
+NL+ H +K+GL T + L+ +Y++ + +F+++ ER+ FSW I+
Sbjct: 468 MNLRFGTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKERDAFSWTVIM 527
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
S K+ + ++ F SML E+IR
Sbjct: 528 SGYAKTEEAEKVVEYF-----------RSML-----------------------RENIRP 553
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
+ T+ +L++C + ++G G QLH++ +K+ ++S +L+DMY KC +A +F
Sbjct: 554 SDATLAVSLSVCSDMASLGSGLQLHSWAIKSGWNSS-VVSGALVDMYVKCGNIADAEMLF 612
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
+ E D V+WNT+I GY Q+G +
Sbjct: 613 H---------------------------------ESETRDQVAWNTIICGYSQHGHGYKA 639
Query: 244 LKLFVRMGENGVRWNEHTFASALSAC--CGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
L F +M + G R + TF LSAC GL N + K S G+ + +V
Sbjct: 640 LDAFKQMVDEGKRPDGITFVGVLSACSHAGLLN-EGRKYFKSLSSIYGITPTMEHYACMV 698
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGY-SLQGNMEEARRHFDSLTE 353
D+ K + AES++ + SI I+G + N+E A R + L E
Sbjct: 699 DILSKAGRLVEAESLINQMPLAPDSSIWRTILGACRIHRNIEIAERAAERLFE 751
>gi|125553513|gb|EAY99222.1| hypothetical protein OsI_21180 [Oryza sativa Indica Group]
Length = 818
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 190/620 (30%), Positives = 300/620 (48%), Gaps = 67/620 (10%)
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
KD V +N + AE ++ +A+ +F EMQ+ R G
Sbjct: 119 KDAVLWNKHVAMLAEAEEWD-EAIAVFREMQARGVPRRR--------------------G 157
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
R +HA+ +K + DA L MY++ A RV + +++ NA+VA C R
Sbjct: 158 RAVHAYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAG-SVVPWNAVVACCAR 216
Query: 205 EG----EMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEH 260
G +E+A + PE N A +WNT++SG ++G E L + M + G+R +
Sbjct: 217 LGLVDDALELAARMSRSGPEPNVA-TWNTVLSGCSRHGRDREALGVVASMLKQGLRPDAT 275
Query: 261 TFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESML--- 317
T +S L + ++ EIH + L+N L + + + +VD+Y KC ++ A+ +
Sbjct: 276 TVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVFDAL 335
Query: 318 ----------LLKGVRNS--FSIS--------------------SMIVGYSLQGNMEEA- 344
L+ G N+ F I+ +I GYS+ G +A
Sbjct: 336 EHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAV 395
Query: 345 ---RRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGA 401
R+ + NVV WT+L SG E F E + K+GV + + +LL A
Sbjct: 396 LLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHE-MQKDGVQPSLVTMSVLLRA 454
Query: 402 CALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLY 461
CA A GKE+H + LR D + + L+DMYSK G++ A++IF++ +++LVL
Sbjct: 455 CAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFESIQQKNLVLC 514
Query: 462 NVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTA 521
N M+ A HG +AI LF +M G+KPD++TF A+L+A R G V G +YF+ M
Sbjct: 515 NAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTACRSMGLVTEGWEYFDGMET 574
Query: 522 DYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAG 581
Y + P T++YACM+DL R L++A++F++ P + A G+ L C ++ N LA
Sbjct: 575 KYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWGALLTGCSIHGNLALAE 634
Query: 582 EAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEI 641
A L RLE N A Y+ + N+Y E + E ++ M+ + G SW+ +E I
Sbjct: 635 VAARNLFRLEPYNSANYLLMMNLYEYERMYDEAESLKYAMKARGVDSRPGWSWIQIEQGI 694
Query: 642 HIFTVGDVSHPKTNAIYSVL 661
H+F V HP+T IY L
Sbjct: 695 HVFEVDGKPHPETAEIYEEL 714
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 118/502 (23%), Positives = 216/502 (43%), Gaps = 85/502 (16%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R + + H A+K L + L +Y+++ + + ++ D M +V WN
Sbjct: 150 RGVPRRRGRAVHAYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNA 209
Query: 62 IISACIK----SHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSA 117
+++ C + L+ A + S P ++ T+N++L G + G + +AL + M
Sbjct: 210 VVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSG-CSRHGRDREALGVVASMLK- 267
Query: 118 DEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYE 177
+ +R D TV+S L + G ++H F ++ + + ++L+DMY+KC +
Sbjct: 268 -QGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLD 326
Query: 178 EACRVFEGCTEEVNLISKNAMVAACCREGEMEMALK--------------TFW------- 216
A +VF+ E NL + N++VA G ++AL+ T W
Sbjct: 327 CAQKVFDA-LEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLITGY 385
Query: 217 -------------RQPE----LNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNE 259
RQ + + VSW +LISG NG+ E+ M ++GV+ +
Sbjct: 386 SMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSL 445
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLL 319
T + L AC GL K KE+H + L+ + VS+ ++D+Y K
Sbjct: 446 VTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSK------------- 492
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY-VKAQNCEALFDL 378
G++ A+ F+S+ +KN+V+ A+ +G V Q EA+ +L
Sbjct: 493 ------------------GGSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAI-EL 533
Query: 379 LSEFVTKEGVVTDALILVILLGACALQAALHPGKE-IHAYILRMGVQMDKKLISTLVDMY 437
+ + G+ D++ LL AC + G E + GV+ + + +VD+
Sbjct: 534 FHD-MWNSGLKPDSITFTALLTACRSMGLVTEGWEYFDGMETKYGVKPTTENYACMVDLL 592
Query: 438 SKCGNMTYAEIIFQNFIERDLV 459
++CG + A +FIER +
Sbjct: 593 ARCGYLDEA----MDFIERSPI 610
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 12/125 (9%)
Query: 378 LLSEFVTKEGVVT-DALILVILLGACA--------LQAALHPGKEIHAYILRMGVQMDKK 428
LL+ + GV A +LV LL CA + A ++H+ +R G+ D +
Sbjct: 29 LLNAAALRTGVPPYSAGVLVSLLRDCADLHGDDTDHRVARRLAPQLHSLAVRTGLSRDPR 88
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIE---RDLVLYNVMIACYAHHGHEEKAILLFEEML 485
+ LVD+ ++ G + E +D VL+N +A A ++AI +F EM
Sbjct: 89 VTCALVDLLARLGRGPSCARLLHEAAEDGAKDAVLWNKHVAMLAEAEEWDEAIAVFREMQ 148
Query: 486 EKGIK 490
+G+
Sbjct: 149 ARGVP 153
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 97/222 (43%), Gaps = 14/222 (6%)
Query: 12 CHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACI---- 67
CH + K G+ + +T + L+ + L ++ ++L R + + ++S +
Sbjct: 433 CH-EMQKDGVQPSLVTMSVLLRACAGLALQKKGKELHC-FALRRAYDCDMVVSTALIDMY 490
Query: 68 -KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEF 126
K L A+ +F+S K+LV N+ML G + G +A++LF +M ++ ++ D
Sbjct: 491 SKGGSLVSAKVIFESIQQKNLVLCNAMLTG-LAVHGQGREAIELFHDMWNSG--LKPDSI 547
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFM-VKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
T T+ L C + V G + M K + + ++D+ ++C +EA E
Sbjct: 548 TFTALLTACRSMGLVTEGWEYFDGMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIER 607
Query: 186 CTEEVNLISKNAMVAACCREGEM---EMALKTFWRQPELNDA 224
+ A++ C G + E+A + +R N A
Sbjct: 608 SPIDPGASHWGALLTGCSIHGNLALAEVAARNLFRLEPYNSA 649
>gi|356498879|ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 754
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 169/613 (27%), Positives = 296/613 (48%), Gaps = 77/613 (12%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
N F + +++ K +++ AR +F++ P +++V + +++ G++ A+ +F EM
Sbjct: 98 NFFVMSFLVNVYAKCGNMEDARRVFENMPRRNVVAWTTLMVGFVQ-NSQPKHAIHVFQEM 156
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
A + + +T+++ L+ C L ++ G Q HA+++K D S+L +YSKC
Sbjct: 157 LYAGSYPSI--YTLSAVLHACSSLQSLKLGDQFHAYIIKYHLDFDTSVGSALCSLYSKC- 213
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
G +E ALK F R E N +SW + +S
Sbjct: 214 -------------------------------GRLEDALKAFSRIREKN-VISWTSAVSAC 241
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
NG +GL+LFV M ++ NE T SALS CC + +++ ++ S +K G SN
Sbjct: 242 GDNGAPVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNL 301
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
V + ++ +Y K G + EA R F+ + +
Sbjct: 302 RVRNSLLYLYLK-------------------------------SGFIVEAHRFFNRMDDV 330
Query: 355 NVVVWTALFSGYVKAQN--------CEALFDLLSEF--VTKEGVVTDALILVILLGACAL 404
++V W A+ +G+ + C+ + L F + + G+ D L +L C+
Sbjct: 331 SMVTWNAMIAGHAQMMELTKDNLSACQRGSEALKIFSKLNQSGMKPDLFTLSSVLSVCSR 390
Query: 405 QAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVM 464
A+ G++IHA ++ G D + ++L+ MY+KCG++ A F R ++ + M
Sbjct: 391 MLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGSIERASKAFLEMSTRTMIAWTSM 450
Query: 465 IACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYK 524
I ++ HG ++A+ +FE+M G++P+ VTFV +LSA H G V YF M YK
Sbjct: 451 ITGFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVLSACSHAGMVSQALNYFEIMQKKYK 510
Query: 525 ISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAE 584
I P DHY CM+D++ R +LE+A+ F+K + E I +F+ CR + N EL A
Sbjct: 511 IKPVMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCRSHGNLELGFYAS 570
Query: 585 EKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIF 644
E+LL L+ + YV L N+Y + + ++ R+RK M K + SW+ ++ +++ F
Sbjct: 571 EQLLSLKPKDPETYVLLLNMYLSADRFDDVSRVRKMMEVEKVGKLKDWSWISIKDKVYSF 630
Query: 645 TVGDVSHPKTNAI 657
D +HP ++ I
Sbjct: 631 KTNDKTHPPSSLI 643
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 126/506 (24%), Positives = 220/506 (43%), Gaps = 95/506 (18%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
++SL L + H IK L T + L +YSK L ++ K F + E+NV SW
Sbjct: 178 LQSLKLGDQF--HAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIREKNVISWT 235
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
+ +SAC G L+LF+EM S D
Sbjct: 236 SAVSAC--------------------------------GDNGAPVKGLRLFVEMISED-- 261
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
I+ +EFT+TS L+ C ++ ++ G Q+ + +K +++ +SL+ +Y K EA
Sbjct: 262 IKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNLRVRNSLLYLYLKSGFIVEAH 321
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
R F ++V++++ NAM+A G +M T D +S Q G
Sbjct: 322 RFFNR-MDDVSMVTWNAMIA-----GHAQMMELT-------KDNLS-------ACQRGS- 360
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
E LK+F ++ ++G++ + T +S LS C + ++ ++IH+ +K G +S+ VS+ +
Sbjct: 361 -EALKIFSKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSL 419
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
+ +Y KC ++ A L R + +SMI G+S G ++A F+ ++ V T
Sbjct: 420 ISMYNKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNT 479
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
F G + A + G+V+ AL EI +
Sbjct: 480 VTFVGVLSA-------------CSHAGMVSQALNYF----------------EIMQKKYK 510
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAE--IIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
+ MD +VDM+ + G + A I N+ + + N + C + HG+ E
Sbjct: 511 IKPVMDH--YECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCRS-HGNLELGF 567
Query: 479 LLFEEMLEKGIKP-DAVTFVAILSAF 503
E++L +KP D T+V +L+ +
Sbjct: 568 YASEQLL--SLKPKDPETYVLLLNMY 591
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 112/253 (44%), Gaps = 32/253 (12%)
Query: 262 FASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKG 321
+ L C R+ + +H V+K G N FV S +V+VY KC N
Sbjct: 67 YVPLLQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGN------------ 114
Query: 322 VRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSE 381
ME+ARR F+++ +NVV WT L G+V+ + + E
Sbjct: 115 -------------------MEDARRVFENMPRRNVVAWTTLMVGFVQNSQPKHAIHVFQE 155
Query: 382 FVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
+ G L +L AC+ +L G + HAYI++ + D + S L +YSKCG
Sbjct: 156 MLY-AGSYPSIYTLSAVLHACSSLQSLKLGDQFHAYIIKYHLDFDTSVGSALCSLYSKCG 214
Query: 442 NMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
+ A F E++++ + ++ +G K + LF EM+ + IKP+ T + LS
Sbjct: 215 RLEDALKAFSRIREKNVISWTSAVSACGDNGAPVKGLRLFVEMISEDIKPNEFTLTSALS 274
Query: 502 AFRHCGSVEMGEK 514
S+E+G +
Sbjct: 275 QCCEIPSLELGTQ 287
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 99/191 (51%), Gaps = 3/191 (1%)
Query: 382 FVTKEGVVTD-ALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC 440
+ KEG + L V LL C + + + +H ++++ G + ++S LV++Y+KC
Sbjct: 53 LLNKEGTEEEEKLFYVPLLQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAKC 112
Query: 441 GNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAIL 500
GNM A +F+N R++V + ++ + + + AI +F+EML G P T A+L
Sbjct: 113 GNMEDARRVFENMPRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAVL 172
Query: 501 SAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEED 560
A S+++G++ F++ Y + +T + + LY + +LE A++ I E++
Sbjct: 173 HACSSLQSLKLGDQ-FHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRI-REKN 230
Query: 561 AVILGSFLNVC 571
+ S ++ C
Sbjct: 231 VISWTSAVSAC 241
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 188/655 (28%), Positives = 306/655 (46%), Gaps = 99/655 (15%)
Query: 16 AIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQA 75
+I AG + ++ Y K + + +RK+FD M ER+ WNT++S +K+
Sbjct: 132 SIVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKN------ 185
Query: 76 RSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLC 135
S FD +A+ +F +M I D TV + L
Sbjct: 186 -SCFD-------------------------EAILIFGDMVKGG--IGFDSTTVAAVLPGV 217
Query: 136 VKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISK 195
+L ++ G + +K + + ++ L +YSKC E A R+ G + +L+S
Sbjct: 218 AELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETA-RLLFGQIGQPDLVSY 276
Query: 196 NAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGV 255
NAM ISGY N + E ++LF + +G
Sbjct: 277 NAM--------------------------------ISGYTCNNETESSVRLFKELLVSGE 304
Query: 256 RWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAES 315
+ N + + ++ + IH + K+G++SN VS+ + VY +
Sbjct: 305 KVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLN------- 357
Query: 316 MLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEAL 375
+E AR FD +EK++ W A+ SGY + E
Sbjct: 358 ------------------------EIESARLLFDESSEKSLASWNAMISGYAQNGLTEKA 393
Query: 376 FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVD 435
L E E V + + + +L ACA AL GK +H I R + + + + L+D
Sbjct: 394 ISLFQEMQKCE-VRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTALID 452
Query: 436 MYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVT 495
MY+KCG++T A+ +F E++ V +N MI+ Y HG+ +A+ LF EML + P VT
Sbjct: 453 MYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVT 512
Query: 496 FVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSI 555
F+++L A H G V G++ F SM D+ P +HYACM+DL GRA L+KA++F++ +
Sbjct: 513 FLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKM 572
Query: 556 PTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMG 615
P E + G+ L C ++++A LA A +KL L+ N YV L+N+Y+A N+ E
Sbjct: 573 PVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQNVGYYVLLSNIYSAGQNYPEAA 632
Query: 616 RIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYE 670
+R ++ K + GC+ + V + +HIFT GD SHP+ AIY++L TG++ E
Sbjct: 633 SVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSHPQATAIYAMLEKLTGKMRE 687
>gi|255572939|ref|XP_002527400.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533210|gb|EEF34966.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 621
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 181/564 (32%), Positives = 291/564 (51%), Gaps = 28/564 (4%)
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
D FT + C + + G+ +H +++ + + LI MY+K +A +F
Sbjct: 41 DGFTFPLVIRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELIGMYAKLGRMRDARHLF 100
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWR------QPELNDAVSWNTLISGYVQN 237
+ + + IS N MV+A + AL+ F R +P L V+W +LIS Y ++
Sbjct: 101 DRMSVR-SYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNL---VTWTSLISSYARS 156
Query: 238 GDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVS 297
G EE ++LF M GV + A +S C L AK IH + +K G FV
Sbjct: 157 GWHEEAMELFGLMRMKGVEVSGEALAVVISICADLGAFVRAKIIHEYAVKGGFEEYSFVK 216
Query: 298 SGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE---- 353
S ++ VY K ++N A ++ L ++ S +++I ++ G +EA F L
Sbjct: 217 SALICVYGKHGDVNGAWNLFLEMKNKSLASWNALITSHAEAGLCDEALEIFSQLERSGDC 276
Query: 354 ----KNVVVWTALFSGYV-KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAAL 408
NVV W+A+ G+ K + EAL L + ++ +A+ + +L CA AAL
Sbjct: 277 PRLRPNVVSWSAIIDGFASKGREKEAL--ELFRRMQHAKILANAVTISTVLSLCAELAAL 334
Query: 409 HPGKEIHAYILRMGVQMDKKLIST-LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIAC 467
H G+EIH +++R V ++ L+ LV+MY+KCG + +IF+ +DL+ +N MI
Sbjct: 335 HLGREIHGHVVR-AVMVNNILVGNGLVNMYAKCGCLKEGHMIFEKTERKDLISWNSMITG 393
Query: 468 YAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISP 527
Y HG A+ F++M++ G KPD VTFVA+LS+ H G V G + F+ M Y+I P
Sbjct: 394 YGMHGLGMNALETFDQMIKLGFKPDGVTFVAVLSSCSHSGLVHEGRRLFDQMLKKYRIEP 453
Query: 528 ETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKL 587
+ +HYACM+DL GRA L +A E +K++P +A + G+ LN CR++ N E+A E L
Sbjct: 454 QMEHYACMVDLLGRAGLLREASEIVKNMPVAPNACVWGALLNSCRMHNNTEIAEETASHL 513
Query: 588 LRLEGN-NKARYVQLANVYAAEGNWAEMGRIRK--QMRGMKGNRFAGCSWVYVEHEIHIF 644
L Y+ L+N+YAA G W + R+R + +G+K N G SW+ VE ++ F
Sbjct: 514 FNLSHRETTGTYMLLSNIYAASGRWEDSARVRTSAKTKGLKKN--PGQSWIKVEKNVYTF 571
Query: 645 TVGDVSHPKTNAIYSVLAIFTGEL 668
+ G+ I+ +L T ++
Sbjct: 572 SAGNNMQRGFEQIFEILEELTFQM 595
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/457 (24%), Positives = 204/457 (44%), Gaps = 58/457 (12%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H ++ G N+LI +Y+K +R++R LFD M R+ SWNT++SA ++D
Sbjct: 65 HGHVLEMGFQSHLHVGNELIGMYAKLGRMRDARHLFDRMSVRSYISWNTMVSAYAFNYDC 124
Query: 73 KQARSLFD----SSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
A +F +LVT+ S++ Y + G+ +A++LF M+ + + V
Sbjct: 125 NGALEIFQRMESEGMEPNLVTWTSLISSYARS-GWHEEAMELFGLMRMKGVEVSGEALAV 183
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE 188
+++C L + +H + VK + F S+LI +Y K A +F
Sbjct: 184 --VISICADLGAFVRAKIIHEYAVKGGFEEYSFVKSALICVYGKHGDVNGAWNLFLEMKN 241
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQ------PELN-DAVSWNTLISGYVQNGDAE 241
+ +L S NA++ + G + AL+ F + P L + VSW+ +I G+ G +
Sbjct: 242 K-SLASWNALITSHAEAGLCDEALEIFSQLERSGDCPRLRPNVVSWSAIIDGFASKGREK 300
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E L+LF RM + N T ++ LS C L + +EIH V++ +++N V +G+V
Sbjct: 301 EALELFRRMQHAKILANAVTISTVLSLCAELAALHLGREIHGHVVRAVMVNNILVGNGLV 360
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
++Y KC G ++E F+ K+++ W +
Sbjct: 361 NMYAKC-------------------------------GCLKEGHMIFEKTERKDLISWNS 389
Query: 362 LFSGYVK---AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
+ +GY N FD + K G D + V +L +C+ +H G+ + +
Sbjct: 390 MITGYGMHGLGMNALETFDQM----IKLGFKPDGVTFVAVLSSCSHSGLVHEGRRLFDQM 445
Query: 419 L---RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQN 452
L R+ QM+ + +VD+ + G + A I +N
Sbjct: 446 LKKYRIEPQMEH--YACMVDLLGRAGLLREASEIVKN 480
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 133/253 (52%), Gaps = 15/253 (5%)
Query: 9 ALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIK 68
A I H A+K G + + LI +Y KH + + LF EM +++ SWN +I++ +
Sbjct: 197 AKIIHEYAVKGGFEEYSFVKSALICVYGKHGDVNGAWNLFLEMKNKSLASWNALITSHAE 256
Query: 69 SHDLKQARSLFD--------SSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
+ +A +F ++V++++++ G+ ++G E +AL+LF MQ A
Sbjct: 257 AGLCDEALEIFSQLERSGDCPRLRPNVVSWSAIIDGFA-SKGREKEALELFRRMQHAK-- 313
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
I + T+++ L+LC +L + GR++H +V+ + + L++MY+KC C +E
Sbjct: 314 ILANAVTISTVLSLCAELAALHLGREIHGHVVRAVMVNNILVGNGLVNMYAKCGCLKEGH 373
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN---DAVSWNTLISGYVQN 237
+FE TE +LIS N+M+ G AL+TF + +L D V++ ++S +
Sbjct: 374 MIFEK-TERKDLISWNSMITGYGMHGLGMNALETFDQMIKLGFKPDGVTFVAVLSSCSHS 432
Query: 238 GDAEEGLKLFVRM 250
G EG +LF +M
Sbjct: 433 GLVHEGRRLFDQM 445
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 127/279 (45%), Gaps = 9/279 (3%)
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
RM + G + TF + AC + + K IH VL+ G S+ V + ++ +Y K
Sbjct: 32 RMRKIGTLGDGFTFPLVIRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELIGMYAKLG 91
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSL----QGNMEEARRHFDSLTEKNVVVWTALFS 364
M A + VR+ S ++M+ Y+ G +E +R E N+V WT+L S
Sbjct: 92 RMRDARHLFDRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLVTWTSLIS 151
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
Y ++ E +L + +GV L +++ CA A K IH Y ++ G +
Sbjct: 152 SYARSGWHEEAMELFG-LMRMKGVEVSGEALAVVISICADLGAFVRAKIIHEYAVKGGFE 210
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
+ S L+ +Y K G++ A +F + L +N +I +A G ++A+ +F ++
Sbjct: 211 EYSFVKSALICVYGKHGDVNGAWNLFLEMKNKSLASWNALITSHAEAGLCDEALEIFSQL 270
Query: 485 LEKG----IKPDAVTFVAILSAFRHCGSVEMGEKYFNSM 519
G ++P+ V++ AI+ F G + + F M
Sbjct: 271 ERSGDCPRLRPNVVSWSAIIDGFASKGREKEALELFRRM 309
>gi|449531466|ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like, partial [Cucumis sativus]
Length = 610
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 167/497 (33%), Positives = 242/497 (48%), Gaps = 62/497 (12%)
Query: 227 WNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVL 286
WN + GY N E + LF +M VR N TF L +C + +EIH V+
Sbjct: 91 WNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVI 150
Query: 287 KNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARR 346
K GL N FV++ ++DVY + A + + RN + +SMI GY L + ARR
Sbjct: 151 KGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVALARR 210
Query: 347 HFDSLTEKNVVVWTALFSGYVK----------------------------------AQNC 372
FD E++VV+W + SGY++ + C
Sbjct: 211 LFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNTMLNGYANNGDVEAC 270
Query: 373 EALFDLLSE----------------------------FVTKEGVVTDALILVILLGACAL 404
E LF+ + E + VV + LV +L ACA
Sbjct: 271 EQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACAR 330
Query: 405 QAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVM 464
AL GK +H Y +G + + + L+DMYSKCG + A +F++ +DL+ +N M
Sbjct: 331 LGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDLKDLITWNSM 390
Query: 465 IACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYK 524
I A HG A+ LF +M G KPD +TF+ +L + H G VE G YFNSM +Y
Sbjct: 391 ICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEYS 450
Query: 525 ISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAE 584
I+P+ +HY CM+DL+GRA L++AIEF+K +P E DAVI + L CR+ +N +LA A
Sbjct: 451 IAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGACRIYKNIDLAELAL 510
Query: 585 EKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIF 644
+KL+ LE N A YV L+N+Y G W ++ R++ MR + GCS + V + F
Sbjct: 511 QKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVEF 570
Query: 645 TVGDVSHPKTNAIYSVL 661
D H ++ IY VL
Sbjct: 571 YSLDERHSQSKEIYGVL 587
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/450 (23%), Positives = 175/450 (38%), Gaps = 102/450 (22%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
+ N + ++++ + + AR LFD P + +N++ GY + Y + + LF
Sbjct: 54 QYNGYVAPNVVTSWVGLKQMAHARHLFDHFPDPKVELWNAISRGYFHNAFYR-EVVFLFG 112
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
+M+S D +R + FT L C K+ G ++H ++K + + F ++LID+YS
Sbjct: 113 KMKSMD--VRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSG 170
Query: 173 CRCYEEACRVFEGCTE------------------------------EVNLISKNAMVAAC 202
R A ++F G E E +++ N MV+
Sbjct: 171 GRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVALARRLFDLAPERDVVLWNIMVSGY 230
Query: 203 CREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGV-RW---- 257
G+M+ A K F P D +SWNT+++GY NGD E +LF M E V W
Sbjct: 231 IEIGDMKAARKLFDTMP-YRDTMSWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLI 289
Query: 258 ---------------------------NEHTFASALSACCGLRNVKCAKEIHSWVLKNGL 290
N+ T + LSAC L + K +H + G
Sbjct: 290 GGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGF 349
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFD- 349
+ +V + ++D+Y KC + A + +++ + +SMI G + G +A F
Sbjct: 350 KGSIYVGNALIDMYSKCGLIENAMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQ 409
Query: 350 -----------------------SLTEKNVVVWTALFSGYVKAQNCE------------A 374
L E+ + ++ + Y A E
Sbjct: 410 MKINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAG 469
Query: 375 LFDLLSEFVTKEGVVTDALILVILLGACAL 404
L D EFV + + DA+I LLGAC +
Sbjct: 470 LLDRAIEFVKRMPMEADAVIWAALLGACRI 499
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 123/321 (38%), Gaps = 95/321 (29%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFS-------------- 58
H + IK GL LI +YS + + KLF M ERN+ +
Sbjct: 146 HCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRV 205
Query: 59 -----------------WNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAE 101
WN ++S I+ D+K AR LFD+ P++D +++N+ML GY N
Sbjct: 206 ALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNTMLNGYANNG 265
Query: 102 GYEADALKLFIEMQS------------------------------ADEHIRMDEFTVTST 131
EA +LF EM D + ++ T+ +
Sbjct: 266 DVEA-CEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTV 324
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L+ C +L + G+ +H + S + ++LIDMYSKC E A VFE
Sbjct: 325 LSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESM----- 379
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
+L D ++WN++I G +G + L LF +M
Sbjct: 380 ----------------------------DLKDLITWNSMICGLATHGCGADALTLFHQMK 411
Query: 252 ENGVRWNEHTFASALSACCGL 272
NG + + TF L +C L
Sbjct: 412 INGEKPDGITFIGVLCSCTHL 432
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 131/313 (41%), Gaps = 45/313 (14%)
Query: 245 KLFVRMGENGVRWN-EHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
KL + + RW E F S L +C + V +++ + ++ +G N +V+ +V
Sbjct: 10 KLLLYSAQKHPRWVLEEHFISLLRSC---KTVALLQKVQAQIITHGFQYNGYVAPNVVTS 66
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
+ + M +A R FD + V +W A+
Sbjct: 67 WVGLKQMAHA-------------------------------RHLFDHFPDPKVELWNAIS 95
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
GY + L + + + V + ++L +CA A G+EIH +++ G+
Sbjct: 96 RGYFHNAFYREVVFLFGKMKSMD-VRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGL 154
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
+ ++ + +TL+D+YS + A +F +ER++V + MI+ Y A LF+
Sbjct: 155 EGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVALARRLFDL 214
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRAN 543
E+ D V + ++S + G ++ K F++M Y+ +T + M++ Y
Sbjct: 215 APER----DVVLWNIMVSGYIEIGDMKAARKLFDTMP--YR---DTMSWNTMLNGYANNG 265
Query: 544 QLEKAIEFMKSIP 556
+E + + +P
Sbjct: 266 DVEACEQLFEEMP 278
>gi|297746037|emb|CBI16093.3| unnamed protein product [Vitis vinifera]
Length = 702
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 193/603 (32%), Positives = 301/603 (49%), Gaps = 76/603 (12%)
Query: 57 FSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQS 116
F ++I K ++ A ++D D T N ++ Y G+ A ++F MQ
Sbjct: 149 FVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYAR-NGFFVQAFQVF--MQI 205
Query: 117 ADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCY 176
+ R + +T ++ L +C + + G+QLHA +VK + ++L+ +YSKC
Sbjct: 206 GNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMM 265
Query: 177 EEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQ 236
EEA VFE NL +N +SW I+G+ Q
Sbjct: 266 EEAEIVFE------NLGQRNI---------------------------ISWTASINGFYQ 292
Query: 237 NGDAEEGLKLFVRMGENGVRWNEHTFASALSAC-CGL-RNVKCAKEIHSW---------- 284
+GD ++ LK F M E+G+ NE TF+ L++C C L + +K + W
Sbjct: 293 HGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCDLGKWMKQRTSSNRWGGQHLMSIFL 352
Query: 285 ---VLKNG-----LISNPFVSSGIVDVYCKCENMNYAESM--LLLKGV--RNSFSISSMI 332
+++ G L N FV I+ + E+M ++LK +++ IS++I
Sbjct: 353 LRKMIEEGNKPTSLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALI 412
Query: 333 VGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDA 392
YS G++E+A R FD + NVV W L +G+ + + +G +
Sbjct: 413 YMYSKCGHVEKACRVFDWI--PNVVSWNTLIAGFSQ--------------MLDQGFCPSS 456
Query: 393 LILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQN 452
+ + LL AC A L GKEIH Y + +GV+ D + S LVDMY+KCG ++ A+I+F
Sbjct: 457 VTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYM 516
Query: 453 FIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMG 512
ER+ V +N +I YA+HG+ +AI LF +M E K D +TF A+L+A H G VE+G
Sbjct: 517 MPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELG 576
Query: 513 EKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCR 572
E F M Y+I P +HYACM+DL GRA +L +A + +K++P E D + G+ L CR
Sbjct: 577 ESLFRKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACR 636
Query: 573 LNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGC 632
+ N ELA A E L LE + + L+N+YA G W +++K M+ K +F GC
Sbjct: 637 NHGNIELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGC 696
Query: 633 SWV 635
SW+
Sbjct: 697 SWI 699
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 120/493 (24%), Positives = 219/493 (44%), Gaps = 81/493 (16%)
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
V S L+ C + V GR+ H F+VK + F +SLIDMY+KC
Sbjct: 116 VFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKC-------------- 161
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
GE++ A++ + + L DA + N LIS Y +NG + ++F
Sbjct: 162 ------------------GEVDSAVRVYDKMTSL-DAATCNCLISAYARNGFFVQAFQVF 202
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
+++G G R N +T+++ L+ C + ++ K++H+ V+K +S V + ++ +Y KC
Sbjct: 203 MQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKC 262
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
M AE + G RN S ++ I G+ G+ ++A + F + E + FS +
Sbjct: 263 GMMEEAEIVFENLGQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVL 322
Query: 368 KAQNCE-----------------------ALFDLLSEFVTKEGVVTDALILVILLGACAL 404
+ C+ L ++ E + + +L +L AC
Sbjct: 323 ASCGCDLGKWMKQRTSSNRWGGQHLMSIFLLRKMIEEGNKPTSLRPNQFVLPSILKACGH 382
Query: 405 QAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVM 464
+ G+ +H IL+ + D +IS L+ MYSKCG++ A +F ++I ++V +N +
Sbjct: 383 LSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVF-DWIP-NVVSWNTL 440
Query: 465 IACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYK 524
IA F +ML++G P +VT ++L A + ++ G++
Sbjct: 441 IAG-------------FSQMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMV--- 484
Query: 525 ISPETDHY--ACMIDLYGRANQLEKAIEFMKSIPTEE----DAVILGSFLNVCRLNRNAE 578
I E D Y + ++D+Y + + +A +P +++I G + N N E
Sbjct: 485 IGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFG-YANHGYCNEAIE 543
Query: 579 LAGEAEEKLLRLE 591
L + EE +L+
Sbjct: 544 LFNQMEESDTKLD 556
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 120/480 (25%), Positives = 205/480 (42%), Gaps = 86/480 (17%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
++E H +K T N L+ +YSK ++ E+ +F+ + +RN+ SW I+
Sbjct: 230 IQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFENLGQRNIISWTASING 289
Query: 66 CIKSHDLKQARSLF----DSSPHKDLVTYNSML--CGYINAEGYEADA------------ 107
+ D K+A F +S + T++ +L CG + +
Sbjct: 290 FYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCDLGKWMKQRTSSNRWGGQHLMS 349
Query: 108 ---LKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVS 164
L+ IE + +R ++F + S L C L + G +H ++K S ++ + +S
Sbjct: 350 IFLLRKMIEEGNKPTSLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIIS 409
Query: 165 SLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDA 224
+LI MYSKC E+ACRVF+ W + +
Sbjct: 410 ALIYMYSKCGHVEKACRVFD-------------------------------W----IPNV 434
Query: 225 VSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSW 284
VSWNTLI+G+ Q M + G + T +S L AC + N++ KEIH +
Sbjct: 435 VSWNTLIAGFSQ-------------MLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGY 481
Query: 285 VLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEA 344
+ G+ + +V S +VD+Y KC ++ A+ + + RN+ + +S+I GY+ G EA
Sbjct: 482 AMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEA 541
Query: 345 RRHFDSLTEKNVVVWTALFSGYVKA-------QNCEALFDLLSEFVTKEGVVTDALILVI 397
F+ + E + + F+ + A + E+LF + E E + +V
Sbjct: 542 IELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFRKMQEKYRIEPRLEHYACMVD 601
Query: 398 LLGACALQAALHPGKEIHAY--ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIE 455
LLG GK AY I M V+ DK + L+ GN+ AE+ ++ E
Sbjct: 602 LLG--------RAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFE 653
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 85/208 (40%), Gaps = 35/208 (16%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
NL+ H A+ G+ + L+ +Y+K + E++ LF MPERN +WN++I
Sbjct: 471 NLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIF 530
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
GY N GY +A++LF +M+ +D ++D
Sbjct: 531 -------------------------------GYAN-HGYCNEAIELFNQMEESD--TKLD 556
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMV-KTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
T T+ LN C V G L M K + + ++D+ + EA +
Sbjct: 557 HLTFTAVLNACSHAGMVELGESLFRKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLI 616
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMA 211
+ E + A++ AC G +E+A
Sbjct: 617 KAMPVEPDKFVWGALLGACRNHGNIELA 644
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 170/636 (26%), Positives = 307/636 (48%), Gaps = 73/636 (11%)
Query: 41 LRESRKLFDEMPE----RNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCG 96
L + +++ M E ++ ++S K ++ A +F+ +++V++ +M+ G
Sbjct: 322 LEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAG 381
Query: 97 YINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSN 156
+ G +A F +M + I + T S L C + + GRQ+H ++K
Sbjct: 382 FAQ-HGRMEEAFLFFNKM--IESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGY 438
Query: 157 DASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFW 216
++L+ MY+KC +A VFE ISK +VA
Sbjct: 439 ITDDRVRTALLSMYAKCGSLMDARNVFE-------RISKQNVVA---------------- 475
Query: 217 RQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVK 276
WN +I+ YVQ+ + + F + + G++ + TF S L+ C ++
Sbjct: 476 ----------WNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALE 525
Query: 277 CAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYS 336
K + S +++ G S+ + + +V ++ C
Sbjct: 526 LGKWVQSLIIRAGFESDLHIRNALVSMFVNC----------------------------- 556
Query: 337 LQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILV 396
G++ A F+ + E+++V W + +G+V+ + FD + + + GV D +
Sbjct: 557 --GDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYF-KMMQESGVKPDQITFT 613
Query: 397 ILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER 456
LL ACA AL G+ +HA I + D + + L+ MY+KCG++ A ++F N ++
Sbjct: 614 GLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKK 673
Query: 457 DLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYF 516
++ + MI YA HG ++A+ LF +M ++G+KPD +TFV LSA H G ++ G +F
Sbjct: 674 NVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHF 733
Query: 517 NSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRN 576
SM D+ I P +HY CM+DL+GRA L +A+EF+ + + D+ + G+ L C+++ +
Sbjct: 734 ESMK-DFNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLD 792
Query: 577 AELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVY 636
ELA + +K L L+ N+ YV L+N+YAA G W E+ ++RK M + G SW+
Sbjct: 793 VELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIE 852
Query: 637 VEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYEIA 672
V+ +HIF D +HP+ I++ L E+ ++
Sbjct: 853 VDGRVHIFCSDDKTHPQIEEIHAELGRLHMEMKKLG 888
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 141/563 (25%), Positives = 265/563 (47%), Gaps = 76/563 (13%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMP----ERNVFSWN 60
L EA++ + + + T + L+ + KH L + ++ + + + ++F WN
Sbjct: 84 QLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWN 143
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
+IS K + A+ +FD P KD+ ++N +L GY+ YE +A +L +M +
Sbjct: 144 MLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYE-EAFRLHEQM--VQDG 200
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
++ D++T LN C NV G +L + ++ D F ++LI+M+ KC ++A
Sbjct: 201 VKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDAL 260
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+VF NL + D ++W ++I+G ++
Sbjct: 261 KVFN------NLPRR---------------------------DLITWTSMITGLARHRQF 287
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
++ LF M E GV+ ++ F S L AC ++ K +H+ + + GL + +V + +
Sbjct: 288 KQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTAL 347
Query: 301 VDVYCKCENMNYA-ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
+ +Y KC +M A E L+KG RN S ++MI G++ G MEEA F+ + E
Sbjct: 348 LSMYTKCGSMEDALEVFNLVKG-RNVVSWTAMIAGFAQHGRMEEAFLFFNKMIE------ 400
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
G+ + + + +LGAC+ +AL G++IH I+
Sbjct: 401 --------------------------SGIEPNRVTFMSILGACSRPSALKQGRQIHDRII 434
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
+ G D ++ + L+ MY+KCG++ A +F+ ++++V +N MI Y H + A+
Sbjct: 435 KAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVA 494
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
F+ +L++GIKPD+ TF +IL+ + ++E+G K+ S+ + ++ ++
Sbjct: 495 TFQALLKEGIKPDSSTFTSILNVCKSPDALELG-KWVQSLIIRAGFESDLHIRNALVSMF 553
Query: 540 GRANQLEKAIEFMKSIPTEEDAV 562
L A+ +P E D V
Sbjct: 554 VNCGDLMSAMNLFNDMP-ERDLV 575
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 120/461 (26%), Positives = 221/461 (47%), Gaps = 68/461 (14%)
Query: 98 INAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSND 157
++ G ++A+ + + + S HI++ T +S L LC+K N+G G ++H + +
Sbjct: 79 LSKAGQLSEAMLVLLSVDSP--HIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQ 136
Query: 158 ASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWR 217
F + LI MY+KC A ++F+ EM K
Sbjct: 137 PDIFMWNMLISMYAKCGNTNSAKQIFD------------------------EMPDK---- 168
Query: 218 QPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKC 277
D SWN L+ GYVQ+ EE +L +M ++GV+ +++TF L+AC +NV
Sbjct: 169 -----DVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDK 223
Query: 278 AKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSL 337
E+ S +L G ++ FV + +++++ KC
Sbjct: 224 GGELFSLILNAGWDTDLFVGTALINMHIKC------------------------------ 253
Query: 338 QGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVI 397
G +++A + F++L ++++ WT++ +G + + + +L + + +EGV D + V
Sbjct: 254 -GGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLF-QVMEEEGVQPDKVAFVS 311
Query: 398 LLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD 457
LL AC AL GK +HA + +G+ + + + L+ MY+KCG+M A +F R+
Sbjct: 312 LLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRN 371
Query: 458 LVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFN 517
+V + MIA +A HG E+A L F +M+E GI+P+ VTF++IL A +++ G + +
Sbjct: 372 VVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHD 431
Query: 518 SMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE 558
+ I+ + A ++ +Y + L A + I +
Sbjct: 432 RIIKAGYITDDRVRTA-LLSMYAKCGSLMDARNVFERISKQ 471
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 152/325 (46%), Gaps = 37/325 (11%)
Query: 228 NTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLK 287
N ++ + G E + + + + ++ + T++S L C +N+ + IH+ +
Sbjct: 73 NAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKF 132
Query: 288 NGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRH 347
+ + + F+ + ++ +Y KC GN A++
Sbjct: 133 SKIQPDIFMWNMLISMYAKC-------------------------------GNTNSAKQI 161
Query: 348 FDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAA 407
FD + +K+V W L GYV+ + E F L + V ++GV D V +L ACA
Sbjct: 162 FDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMV-QDGVKPDKYTFVYMLNACADAKN 220
Query: 408 LHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIAC 467
+ G E+ + IL G D + + L++M+ KCG + A +F N RDL+ + MI
Sbjct: 221 VDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITG 280
Query: 468 YAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISP 527
A H ++A LF+ M E+G++PD V FV++L A H ++E G++ M ++
Sbjct: 281 LARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMK---EVGL 337
Query: 528 ETDHY--ACMIDLYGRANQLEKAIE 550
+T+ Y ++ +Y + +E A+E
Sbjct: 338 DTEIYVGTALLSMYTKCGSMEDALE 362
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 98/254 (38%), Gaps = 40/254 (15%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L E H +A L + LI +Y+K + ++ +F +P++NV+SW
Sbjct: 625 LTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSW------ 678
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
SM+ GY G +AL+LF +MQ E ++ D
Sbjct: 679 -------------------------TSMITGYAQ-HGRGKEALELFCQMQQ--EGVKPDW 710
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAF--MVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
T L+ C + G LH F M + + ++D++ + EA
Sbjct: 711 ITFVGALSACAHAGLIKEG--LHHFESMKDFNIEPRMEHYGCMVDLFGRAGLLHEAVEFI 768
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPEL--NDAVSWNTLISGYVQNGDAE 241
+ + A++ AC ++E+A K ++ EL ND + L + Y G +
Sbjct: 769 NKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWK 828
Query: 242 EGLKLFVRMGENGV 255
E K+ M + GV
Sbjct: 829 EVTKMRKVMLDRGV 842
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.135 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,912,192,902
Number of Sequences: 23463169
Number of extensions: 395024045
Number of successful extensions: 1104323
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9599
Number of HSP's successfully gapped in prelim test: 2194
Number of HSP's that attempted gapping in prelim test: 877064
Number of HSP's gapped (non-prelim): 81469
length of query: 676
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 526
effective length of database: 8,839,720,017
effective search space: 4649692728942
effective search space used: 4649692728942
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 81 (35.8 bits)