BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005802
(676 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LHN5|PP242_ARATH Putative pentatricopeptide repeat-containing protein At3g18840
OS=Arabidopsis thaliana GN=PCMP-E92 PE=2 SV=1
Length = 678
Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/670 (54%), Positives = 490/670 (73%), Gaps = 4/670 (0%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
LK+ + H+++IK+G TLT +++NQL+++YSK LLRE+R +FDEM ERNV+SWN +I+A
Sbjct: 4 LKDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAA 63
Query: 66 CIKSHDLKQARSLFDSSP-HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSAD-EHIRM 123
+K +++K+AR LF+S +DL+TYN++L G+ +G E++A+++F EM + + I +
Sbjct: 64 YVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWI 123
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
D+FTVT+ + L KL NV +G QLH +VKT ND + FAVSSLI MYSKC ++E C +F
Sbjct: 124 DDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIF 183
Query: 184 EG-CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
G C E V+ +++NAM+AA CREG+++ AL FWR PELND +SWNTLI+GY QNG EE
Sbjct: 184 NGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEE 243
Query: 243 GLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVD 302
LK+ V M ENG++W+EH+F + L+ L+++K KE+H+ VLKNG SN FVSSGIVD
Sbjct: 244 ALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVD 303
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL 362
VYCKC NM YAES LL G N +S SSMIVGYS QG M EA+R FDSL+EKN+VVWTA+
Sbjct: 304 VYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAM 363
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
F GY+ + +++ +L F+ E D+L++V +LGAC+LQA + PGKEIH + LR G
Sbjct: 364 FLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTG 423
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
+ MDKKL++ VDMYSKCGN+ YAE IF + ERD V+YN MIA AHHGHE K+ FE
Sbjct: 424 ILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFE 483
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRA 542
+M E G KPD +TF+A+LSA RH G V GEKYF SM Y ISPET HY CMIDLYG+A
Sbjct: 484 DMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKA 543
Query: 543 NQLEKAIEFMKSIP-TEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQL 601
+L+KAIE M+ I E+DAVILG+FLN C N+N EL E EEKLL +EG+N +RY+Q+
Sbjct: 544 YRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQI 603
Query: 602 ANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
AN YA+ G W EM RIR QMRG + F+GCSW ++ + H+FT D+SH +T AIY++L
Sbjct: 604 ANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAML 663
Query: 662 AIFTGELYEI 671
T +L EI
Sbjct: 664 HFVTKDLSEI 673
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 422 bits (1086), Expect = e-117, Method: Compositional matrix adjust.
Identities = 241/664 (36%), Positives = 367/664 (55%), Gaps = 46/664 (6%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H IK+G + N+LI YSK L + R++FD+MP+RN+++WN++++ K L
Sbjct: 43 HASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFL 102
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+A SLF S P +D T+NSM+ G+ + E +AL F M E ++E++ S L
Sbjct: 103 DEADSLFRSMPERDQCTWNSMVSGFAQHDRCE-EALCYFAMMHK--EGFVLNEYSFASVL 159
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C L ++ G Q+H+ + K+ + + S+L+DMYSKC +A RVF+
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFD-------- 211
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
EM + + VSWN+LI+ + QNG A E L +F M E
Sbjct: 212 ----------------EMGDR---------NVVSWNSLITCFEQNGPAVEALDVFQMMLE 246
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFV-SSGIVDVYCKCENMN 311
+ V +E T AS +SAC L +K +E+H V+KN + N + S+ VD+Y KC +
Sbjct: 247 SRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIK 306
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK-AQ 370
A + +RN + +SMI GY++ + + AR F + E+NVV W AL +GY + +
Sbjct: 307 EARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGE 366
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM----- 425
N EAL L + +E V +L ACA A LH G + H ++L+ G +
Sbjct: 367 NEEALS--LFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEE 424
Query: 426 -DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
D + ++L+DMY KCG + ++F+ +ERD V +N MI +A +G+ +A+ LF EM
Sbjct: 425 DDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREM 484
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
LE G KPD +T + +LSA H G VE G YF+SMT D+ ++P DHY CM+DL GRA
Sbjct: 485 LESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGF 544
Query: 545 LEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANV 604
LE+A ++ +P + D+VI GS L C+++RN L EKLL +E +N YV L+N+
Sbjct: 545 LEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNM 604
Query: 605 YAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIF 664
YA G W ++ +RK MR + GCSW+ ++ H+F V D SHP+ I+S+L I
Sbjct: 605 YAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDIL 664
Query: 665 TGEL 668
E+
Sbjct: 665 IAEM 668
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 198/406 (48%), Gaps = 41/406 (10%)
Query: 107 ALKLFIEMQSADEHIRMDEFTVTSTLNLCVK-LLNVGFGRQLHAFMVKTSNDASGFAVSS 165
A K F+++ +AD D L+ C+K L+ + R +HA ++K+ F +
Sbjct: 2 ATKSFLKL-AADLSSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNR 60
Query: 166 LIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAV 225
LID YSKC E+ +VF+ + N+ + N++V + G ++ A F PE D
Sbjct: 61 LIDAYSKCGSLEDGRQVFDKMPQR-NIYTWNSVVTGLTKLGFLDEADSLFRSMPE-RDQC 118
Query: 226 SWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWV 285
+WN+++SG+ Q+ EE L F M + G NE++FAS LSAC GL ++ ++HS +
Sbjct: 119 TWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLI 178
Query: 286 LKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEAR 345
K+ +S+ ++ S +VD+Y KC N+N A+ + G RN S +S+I + G EA
Sbjct: 179 AKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEAL 238
Query: 346 RHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQ 405
F + E V D + L ++ ACA
Sbjct: 239 DVFQMMLESR--------------------------------VEPDEVTLASVISACASL 266
Query: 406 AALHPGKEIHAYILRMG-VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVM 464
+A+ G+E+H +++ ++ D L + VDMY+KC + A IF + R+++ M
Sbjct: 267 SAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSM 326
Query: 465 IACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVE 510
I+ YA + A L+F +M E+ + V++ A+++ + G E
Sbjct: 327 ISGYAMAASTKAARLMFTKMAERNV----VSWNALIAGYTQNGENE 368
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 158/300 (52%), Gaps = 2/300 (0%)
Query: 258 NEHTFASALSACCGLR-NVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESM 316
+ FA L +C + + + +H+ V+K+G + F+ + ++D Y KC ++ +
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77
Query: 317 LLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALF 376
RN ++ +S++ G + G ++EA F S+ E++ W ++ SG+ + CE
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 377 DLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDM 436
+ + KEG V + +L AC+ ++ G ++H+ I + D + S LVDM
Sbjct: 138 CYFA-MMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDM 196
Query: 437 YSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTF 496
YSKCGN+ A+ +F +R++V +N +I C+ +G +A+ +F+ MLE ++PD VT
Sbjct: 197 YSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTL 256
Query: 497 VAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIP 556
+++SA ++++G++ + + K+ + +D+Y + +++++A S+P
Sbjct: 257 ASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP 316
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 394 bits (1011), Expect = e-108, Method: Compositional matrix adjust.
Identities = 231/668 (34%), Positives = 368/668 (55%), Gaps = 10/668 (1%)
Query: 9 ALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIK 68
A + H + IK+GL + N L+++YSK +RKLFDEMP R FSWNT++SA K
Sbjct: 33 AQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSK 92
Query: 69 SHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
D+ FD P +D V++ +M+ GY N Y A+++ +M E I +FT+
Sbjct: 93 RGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHK-AIRVMGDM--VKEGIEPTQFTL 149
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTE 188
T+ L + G+++H+F+VK + +SL++MY+KC A VF+
Sbjct: 150 TNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVV 209
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
++ S NAM+A + G+M++A+ F + E D V+WN++ISG+ Q G L +F
Sbjct: 210 R-DISSWNAMIALHMQVGQMDLAMAQFEQMAE-RDIVTWNSMISGFNQRGYDLRALDIFS 267
Query: 249 RMGENGV-RWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
+M + + + T AS LSAC L + K+IHS ++ G + V + ++ +Y +C
Sbjct: 268 KMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRC 327
Query: 308 ENMNYAESMLLLKGVRNSF--SISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
+ A ++ +G ++ ++++ GY G+M +A+ F SL +++VV WTA+ G
Sbjct: 328 GGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVG 387
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
Y + + +L V G ++ L +L + A+L GK+IH ++ G
Sbjct: 388 YEQHGSYGEAINLFRSMVGG-GQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIY 446
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
+ + L+ MY+K GN+T A F ERD V + MI A HGH E+A+ LFE M
Sbjct: 447 SVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETM 506
Query: 485 LEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
L +G++PD +T+V + SA H G V G +YF+ M KI P HYACM+DL+GRA
Sbjct: 507 LMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGL 566
Query: 545 LEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANV 604
L++A EF++ +P E D V GS L+ CR+++N +L A E+LL LE N Y LAN+
Sbjct: 567 LQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANL 626
Query: 605 YAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIF 664
Y+A G W E +IRK M+ + + G SW+ V+H++H+F V D +HP+ N IY +
Sbjct: 627 YSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKI 686
Query: 665 TGELYEIA 672
E+ ++
Sbjct: 687 WDEIKKMG 694
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 352 bits (903), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 207/606 (34%), Positives = 329/606 (54%), Gaps = 58/606 (9%)
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAE-GYEADALKLFIEMQSADEHIRMDEF 126
K +++ A+ LFD+S + + +YN+M+ GY E G++A L LF + S+ + DE
Sbjct: 328 KCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKA--LLLFHRLMSSG--LGFDEI 383
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
+++ C + + G Q++ +K+S ++ IDMY KC+ EA RVF+
Sbjct: 384 SLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFD-- 441
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
EM + DAVSWN +I+ + QNG E L L
Sbjct: 442 ----------------------EMRRR---------DAVSWNAIIAAHEQNGKGYETLFL 470
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
FV M + + +E TF S L AC G ++ EIHS ++K+G+ SN V ++D+Y K
Sbjct: 471 FVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSK 529
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
C + AE + S ++ G MEE + + ++ V W ++ SGY
Sbjct: 530 CGMIEEAEKIH-----------SRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGY 578
Query: 367 V---KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
V ++++ + LF + E G+ D +L CA A+ GK+IHA +++ +
Sbjct: 579 VMKEQSEDAQMLFTRMMEM----GITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKEL 634
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
Q D + STLVDMYSKCG++ + ++F+ + RD V +N MI YAHHG E+AI LFE
Sbjct: 635 QSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFER 694
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRAN 543
M+ + IKP+ VTF++IL A H G ++ G +YF M DY + P+ HY+ M+D+ G++
Sbjct: 695 MILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSG 754
Query: 544 QLEKAIEFMKSIPTEEDAVILGSFLNVCRLNR-NAELAGEAEEKLLRLEGNNKARYVQLA 602
++++A+E ++ +P E D VI + L VC ++R N E+A EA LLRL+ + + Y L+
Sbjct: 755 KVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLS 814
Query: 603 NVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLA 662
NVYA G W ++ +R+ MRG K + GCSWV ++ E+H+F VGD +HP+ IY L
Sbjct: 815 NVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELG 874
Query: 663 IFTGEL 668
+ E+
Sbjct: 875 LIYSEM 880
Score = 206 bits (525), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 147/538 (27%), Positives = 250/538 (46%), Gaps = 74/538 (13%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H I +G TT N L+ +Y+ + +FD+MP R+V SWN +I+ KS+D+
Sbjct: 71 HAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDM 130
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+A S F+ P +D+V++NSML GY+ G ++++F++M E I D T L
Sbjct: 131 FKANSFFNMMPVRDVVSWNSMLSGYLQ-NGESLKSIEVFVDM--GREGIEFDGRTFAIIL 187
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+C L + G Q+H +V+ D A S+L+DMY+K + + E+ RVF+G E+ N
Sbjct: 188 KVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEK-NS 246
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+S +A++A C + + +ALK F ++N VS
Sbjct: 247 VSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVS-------------------------- 280
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+ +AS L +C L ++ ++H+ LK+ ++ V + +D+Y KC+NM
Sbjct: 281 ------QSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQD 334
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
A+ + N S ++MI GYS + F +L
Sbjct: 335 AQILFDNSENLNRQSYNAMITGYS------QEEHGFKAL--------------------- 367
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
LL + G+ D + L + ACAL L G +I+ ++ + +D + +
Sbjct: 368 -----LLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANA 422
Query: 433 LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD 492
+DMY KC + A +F RD V +N +IA + +G + + LF ML I+PD
Sbjct: 423 AIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPD 482
Query: 493 AVTFVAILSAFRHC--GSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
TF +IL A C GS+ G + +S+ ++ + +ID+Y + +E+A
Sbjct: 483 EFTFGSILKA---CTGGSLGYGMEIHSSIVKS-GMASNSSVGCSLIDMYSKCGMIEEA 536
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 133/476 (27%), Positives = 211/476 (44%), Gaps = 85/476 (17%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L E L + AIK+ L+L N I +Y K L E+ ++FDEM R+ SWN II+A
Sbjct: 398 LSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAA 457
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
H+ N +GYE L LF+ M + I DE
Sbjct: 458 ------------------HEQ------------NGKGYE--TLFLFVSMLRS--RIEPDE 483
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
FT S L C ++G+G ++H+ +VK+ ++ SLIDMYSKC EEA ++
Sbjct: 484 FTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSR 542
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
+ N+ G ME L+ + VSWN++ISGYV +E+
Sbjct: 543 FFQRANV------------SGTME-ELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQM 589
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
LF RM E G+ ++ T+A+ L C L + K+IH+ V+K L S+ ++ S +VD+Y
Sbjct: 590 LFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYS 649
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
KC G++ ++R F+ ++ V W A+ G
Sbjct: 650 KC-------------------------------GDLHDSRLMFEKSLRRDFVTWNAMICG 678
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
Y E L + E + + + + +L ACA + G E + Y+++ +
Sbjct: 679 YAHHGKGEEAIQLFERMIL-ENIKPNHVTFISILRACAHMGLIDKGLE-YFYMMKRDYGL 736
Query: 426 DKKL--ISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMIA-CYAHHGHEEKA 477
D +L S +VD+ K G + A E+I + E D V++ ++ C H + E A
Sbjct: 737 DPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVA 792
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 199/432 (46%), Gaps = 44/432 (10%)
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
C K + G+Q HA M+ + + F ++ L+ +Y+ R + A VF+ +++S
Sbjct: 58 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLR-DVVS 116
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
N M+ + +M A +F+ + D VSWN+++SGY+QNG++ + +++FV MG G
Sbjct: 117 WNKMINGYSKSNDMFKA-NSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREG 175
Query: 255 VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAE 314
+ ++ TFA L C L + +IH V++ G ++ +S ++D+Y K + + E
Sbjct: 176 IEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGK--RFVE 233
Query: 315 SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEA 374
S+ + +G+ EKN V W+A+ +G V+
Sbjct: 234 SLRVFQGI-----------------------------PEKNSVSWSAIIAGCVQNNLLSL 264
Query: 375 LFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLV 434
E V+ + I +L +CA + L G ++HA+ L+ D + + +
Sbjct: 265 ALKFFKEMQKVNAGVSQS-IYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATL 323
Query: 435 DMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAV 494
DMY+KC NM A+I+F N + YN MI Y+ H KA+LLF ++ G+ D +
Sbjct: 324 DMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEI 383
Query: 495 TFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACM----IDLYGRANQLEKAIE 550
+ + FR C V+ + K S D C+ ID+YG+ L +A
Sbjct: 384 SLSGV---FRACALVKGLSEGLQIYGLAIKSSLSLD--VCVANAAIDMYGKCQALAEAFR 438
Query: 551 FMKSIPTEEDAV 562
+ DAV
Sbjct: 439 VFDEM-RRRDAV 449
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 151/331 (45%), Gaps = 26/331 (7%)
Query: 262 FASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKG 321
F+ C ++ K+ H+ ++ +G FV + ++ VY + A +
Sbjct: 51 FSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMP 110
Query: 322 VRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSE 381
+R+ S + MI GYS +M +A F+ + ++VV W ++ SGY+ QN E+L +
Sbjct: 111 LRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYL--QNGESL-KSIEV 167
Query: 382 FVT--KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
FV +EG+ D I+L C+ G +IH ++R+G D S L+DMY+K
Sbjct: 168 FVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAK 227
Query: 440 CGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAI 499
+ +FQ E++ V ++ +IA + A+ F+EM + + ++
Sbjct: 228 GKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASV 287
Query: 500 LSAFRHCGSVEM----GEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSI 555
L R C ++ G+ + +++ +D+ + + +D+Y + + ++ A
Sbjct: 288 L---RSCAALSELRLGGQLHAHALKSDF--AADGIVRTATLDMYAKCDNMQDA------- 335
Query: 556 PTEEDAVILGSFLNVCRLNRNAELAGEAEEK 586
++ + N+ R + NA + G ++E+
Sbjct: 336 -----QILFDNSENLNRQSYNAMITGYSQEE 361
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 344 bits (882), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 213/663 (32%), Positives = 349/663 (52%), Gaps = 61/663 (9%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
MR+ EAL + K ++++ N +I Y ++ +RKLFDEMPER++ SWN
Sbjct: 75 MRTGRCNEAL----RVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWN 130
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
+I +++ +L +AR LF+ P +D+ ++N+ML GY
Sbjct: 131 VMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQ--------------------- 169
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
N CV F R + ND S ++L+ Y + EEAC
Sbjct: 170 ------------NGCVDDARSVFDR------MPEKNDVS---WNALLSAYVQNSKMEEAC 208
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+F+ E L+S N ++ ++ ++ A + F+ + D VSWNT+I+GY Q+G
Sbjct: 209 MLFKS-RENWALVSWNCLLGGFVKKKKIVEA-RQFFDSMNVRDVVSWNTIITGYAQSGKI 266
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
+E +LF E+ V+ + T+ + +S R V+ A+E+ + + +S + +G
Sbjct: 267 DEARQLF---DESPVQ-DVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAG- 321
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
Y + E M A+ + + RN + ++MI GY+ G + EA+ FD + +++ V W
Sbjct: 322 ---YVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWA 378
Query: 361 ALFSGYVKAQNCEALFDLLSEFVT--KEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
A+ +GY ++ + F+ L FV +EG + L CA AL GK++H +
Sbjct: 379 AMIAGYSQSGHS---FEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRL 435
Query: 419 LRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
++ G + + + L+ MY KCG++ A +F+ +D+V +N MIA Y+ HG E A+
Sbjct: 436 VKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVAL 495
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
FE M +G+KPD T VA+LSA H G V+ G +YF +MT DY + P + HYACM+DL
Sbjct: 496 RFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDL 555
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARY 598
GRA LE A MK++P E DA I G+ L R++ N ELA A +K+ +E N Y
Sbjct: 556 LGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMY 615
Query: 599 VQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
V L+N+YA+ G W ++G++R +MR + G SW+ ++++ H F+VGD HP+ + I+
Sbjct: 616 VLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIF 675
Query: 659 SVL 661
+ L
Sbjct: 676 AFL 678
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 340 bits (873), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 195/651 (29%), Positives = 339/651 (52%), Gaps = 37/651 (5%)
Query: 11 ICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSH 70
+ H I+A T N ++H Y+ +R++FD +P+ N+FSWN ++ A K+
Sbjct: 27 MIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAG 86
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
+ + S F+ P +D VT+N ++ GY + G A+K + M D + T+ +
Sbjct: 87 LISEMESTFEKLPDRDGVTWNVLIEGY-SLSGLVGAAVKAYNTMMR-DFSANLTRVTLMT 144
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L L +V G+Q+H ++K ++ S L+ MY+ C +A +VF G ++
Sbjct: 145 MLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGL-DDR 203
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
N + N+++ G +E AL+ F R E D+VSW +I G QNG A+E ++ F M
Sbjct: 204 NTVMYNSLMGGLLACGMIEDALQLF-RGME-KDSVSWAAMIKGLAQNGLAKEAIECFREM 261
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
G++ +++ F S L AC GL + K+IH+ +++ + +V S ++D+YCKC+ +
Sbjct: 262 KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCL 321
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
+YA+++ FD + +KNVV WTA+ GY +
Sbjct: 322 HYAKTV-------------------------------FDRMKQKNVVSWTAMVVGYGQTG 350
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
E + + + + G+ D L + ACA ++L G + H + G+ +
Sbjct: 351 RAEEAVKIFLD-MQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVS 409
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
++LV +Y KCG++ + +F RD V + M++ YA G + I LF++M++ G+K
Sbjct: 410 NSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLK 469
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
PD VT ++SA G VE G++YF MT++Y I P HY+CMIDL+ R+ +LE+A+
Sbjct: 470 PDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMR 529
Query: 551 FMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGN 610
F+ +P DA+ + L+ CR N E+ A E L+ L+ ++ A Y L+++YA++G
Sbjct: 530 FINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGK 589
Query: 611 WAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
W + ++R+ MR + G SW+ + ++H F+ D S P + IY+ L
Sbjct: 590 WDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKL 640
Score = 76.3 bits (186), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 159/401 (39%), Gaps = 88/401 (21%)
Query: 262 FASALSACCGL--RN-VKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLL 318
++ + C GL RN + K IH +++ F+ + IV Y ++ YA +
Sbjct: 6 YSVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFD 65
Query: 319 LKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY---------VKA 369
N FS +++++ YS G + E F+ L +++ V W L GY VKA
Sbjct: 66 RIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKA 125
Query: 370 QNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKL 429
N ++ +F VT L+ +L + + GK+IH ++++G + +
Sbjct: 126 YNT-----MMRDFSANLTRVT----LMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLV 176
Query: 430 ISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYN--------------------------- 462
S L+ MY+ G ++ A+ +F +R+ V+YN
Sbjct: 177 GSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSV 236
Query: 463 ---VMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK----- 514
MI A +G ++AI F EM +G+K D F ++L A G++ G++
Sbjct: 237 SWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACI 296
Query: 515 ---------YFNSMTADYKISPETDHYA----------------CMIDLYGRANQLEKAI 549
Y S D + HYA M+ YG+ + E+A+
Sbjct: 297 IRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAV 356
Query: 550 EF---MKSIPTEEDAVILGSFL----NVCRLNRNAELAGEA 583
+ M+ + D LG + NV L ++ G+A
Sbjct: 357 KIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKA 397
Score = 60.1 bits (144), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 79/376 (21%), Positives = 155/376 (41%), Gaps = 52/376 (13%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L+E H +AI +GL +N L+ +Y K + +S +LF+EM R+ SW ++S
Sbjct: 386 SLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVS 445
Query: 65 ACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMD 124
A + G + ++LF +M ++ D
Sbjct: 446 AYAQF--------------------------------GRAVETIQLFDKM--VQHGLKPD 471
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFA-VSSLIDMYSKCRCYEEACRVF 183
T+T ++ C + V G++ M S +ID++S+ EEA R
Sbjct: 472 GVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFI 531
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELND--AVSWNTLISGYVQNG--D 239
G + I +++AC +G +E+ EL+ + L S Y G D
Sbjct: 532 NGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWD 591
Query: 240 AEEGLKLFVR-------MGENGVRWNE--HTFASALSACCGLRNVKCA-KEIHSWVLKNG 289
+ L+ +R G++ ++W H+F++ + L + +E+++ ++ NG
Sbjct: 592 SVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNG 651
Query: 290 LISNPFVSSGIVDVYCKCENMNY-AESMLLLKGVRNSFSISSMIVGYSLQ--GNMEEARR 346
+ V+ K + +NY +E + + G+ S + VG +L+ + A +
Sbjct: 652 YKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATK 711
Query: 347 HFDSLTEKNVVVWTAL 362
H S+T + ++V A+
Sbjct: 712 HISSVTGREILVRDAV 727
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 338 bits (867), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 195/608 (32%), Positives = 322/608 (52%), Gaps = 35/608 (5%)
Query: 54 RNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIE 113
+++F N+++ + +L AR +FD +++V++ SM+CGY + + DA+ LF
Sbjct: 167 KDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRD-FAKDAVDLFFR 225
Query: 114 MQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKC 173
M DE + + T+ ++ C KL ++ G +++AF+ + + + VS+L+DMY KC
Sbjct: 226 MVR-DEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKC 284
Query: 174 RCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISG 233
+ A R+F+ G + L N + S
Sbjct: 285 NAIDVAKRLFD-------------------EYGASNLDL--------------CNAMASN 311
Query: 234 YVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISN 293
YV+ G E L +F M ++GVR + + SA+S+C LRN+ K H +VL+NG S
Sbjct: 312 YVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESW 371
Query: 294 PFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
+ + ++D+Y KC + A + + + +S++ GY G ++ A F+++ E
Sbjct: 372 DNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPE 431
Query: 354 KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
KN+V W + SG V+ E ++ ++EGV D + ++ + AC AL K
Sbjct: 432 KNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKW 491
Query: 414 IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH 473
I+ YI + G+Q+D +L +TLVDM+S+CG+ A IF + RD+ + I A G+
Sbjct: 492 IYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGN 551
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA 533
E+AI LF++M+E+G+KPD V FV L+A H G V+ G++ F SM + +SPE HY
Sbjct: 552 AERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYG 611
Query: 534 CMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGN 593
CM+DL GRA LE+A++ ++ +P E + VI S L CR+ N E+A A EK+ L
Sbjct: 612 CMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPE 671
Query: 594 NKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPK 653
YV L+NVYA+ G W +M ++R M+ + G S + + + H FT GD SHP+
Sbjct: 672 RTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPE 731
Query: 654 TNAIYSVL 661
I ++L
Sbjct: 732 MPNIEAML 739
Score = 162 bits (410), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 156/617 (25%), Positives = 258/617 (41%), Gaps = 149/617 (24%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT----------- 61
H +K G N L+H Y++ L +RK+FDEM ERNV SW +
Sbjct: 157 HGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFA 216
Query: 62 -------------------------IISACIKSHDLKQ---------------------- 74
+ISAC K DL+
Sbjct: 217 KDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSA 276
Query: 75 -------------ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
A+ LFD +L N+M Y+ +G +AL +F M D +
Sbjct: 277 LVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVR-QGLTREALGVFNLMM--DSGV 333
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
R D ++ S ++ C +L N+ +G+ H ++++ ++ ++LIDMY KC + A R
Sbjct: 334 RPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFR 393
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F+ + + +++ N++VA GE++ A +TF PE N VSWNT+ISG VQ E
Sbjct: 394 IFDRMSNKT-VVTWNSIVAGYVENGEVDAAWETFETMPEKN-IVSWNTIISGLVQGSLFE 451
Query: 242 EGLKLFVRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
E +++F M + GV + T S SAC L + AK I+ ++ KNG+ + + + +
Sbjct: 452 EAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTL 511
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
VD++ +C G+ E A F+SLT ++V WT
Sbjct: 512 VDMFSRC-------------------------------GDPESAMSIFNSLTNRDVSAWT 540
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
A A N E +L + + ++G+ D + V L AC+ + GKEI +L+
Sbjct: 541 AAIGAMAMAGNAERAIELFDDMI-EQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLK 599
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
+ + + + V Y M+ G E+A+ L
Sbjct: 600 L------------------------------HGVSPEDVHYGCMVDLLGRAGLLEEAVQL 629
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE-TDHYACMIDLY 539
E+M ++P+ V + ++L+A R G+VEM + ++PE T Y + ++Y
Sbjct: 630 IEDM---PMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQV---LAPERTGSYVLLSNVY 683
Query: 540 ---GRANQLEKAIEFMK 553
GR N + K MK
Sbjct: 684 ASAGRWNDMAKVRLSMK 700
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 155/322 (48%), Gaps = 36/322 (11%)
Query: 184 EGCTEEVNLISKNAMVAACCREGEME---MALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+G +V+ I+K +VA C G E A + F +N+LI GY +G
Sbjct: 58 QGLDNDVSTITK--LVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLC 115
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
E + LF+RM +G+ +++TF LSAC R +IH ++K G + FV + +
Sbjct: 116 NEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSL 175
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
V Y +C ++ A + RN S +SMI GY ARR F K+ V
Sbjct: 176 VHFYAECGELDSARKVFDEMSERNVVSWTSMICGY--------ARRDF----AKDAV--- 220
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
DL V E V +++ +V ++ ACA L G++++A+I
Sbjct: 221 ----------------DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRN 264
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
G++++ ++S LVDMY KC + A+ +F + +L L N M + Y G +A+ +
Sbjct: 265 SGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGV 324
Query: 481 FEEMLEKGIKPDAVTFVAILSA 502
F M++ G++PD ++ ++ +S+
Sbjct: 325 FNLMMDSGVRPDRISMLSAISS 346
Score = 89.7 bits (221), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 149/338 (44%), Gaps = 43/338 (12%)
Query: 12 CHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHD 71
CH ++ G N LI +Y K + + ++FD M + V +WN+I++ +++ +
Sbjct: 359 CHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGE 418
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
+ A F++ P K++V++N+++ G + +E +A+++F MQS E + D T+ S
Sbjct: 419 VDAAWETFETMPEKNIVSWNTIISGLVQGSLFE-EAIEVFCSMQS-QEGVNADGVTMMSI 476
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
+ C L + + ++ ++ K ++L+DM+S+C E A +F T
Sbjct: 477 ASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR-- 534
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
D +W I G+AE ++LF M
Sbjct: 535 -------------------------------DVSAWTAAIGAMAMAGNAERAIELFDDMI 563
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG-IVDVYCKC--- 307
E G++ + F AL+AC V+ KEI +LK +S V G +VD+ +
Sbjct: 564 EQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLL 623
Query: 308 -ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEA 344
E + E M + N +S++ +QGN+E A
Sbjct: 624 EEAVQLIEDMPMEP---NDVIWNSLLAACRVQGNVEMA 658
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 332 bits (851), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 212/663 (31%), Positives = 323/663 (48%), Gaps = 79/663 (11%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H ++ G N L+ +YS+ L ++RK+FDEM +V SWN+II + K
Sbjct: 150 HALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKL--- 206
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
G AL++F M + + R D T+ + L
Sbjct: 207 -----------------------------GKPKVALEMFSRMTN-EFGCRPDNITLVNVL 236
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C L G+QLH F V + + F + L+DMY+KC +EA VF + + ++
Sbjct: 237 PPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK-DV 295
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELN---DAVSWNTLISGYVQNGDAEEGLKLFVR 249
+S NAMVA + G E A++ F + E D V+W+ ISGY Q G E L + +
Sbjct: 296 VSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQ 355
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVL-------KNGLISNPFVSSGIVD 302
M +G++ NE T S LS C + + KEIH + + KNG V + ++D
Sbjct: 356 MLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLID 415
Query: 303 VYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT--EKNVVVWT 360
+Y KC+ ++ A +M FDSL+ E++VV WT
Sbjct: 416 MYAKCKKVDTARAM-------------------------------FDSLSPKERDVVTWT 444
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKE-GVVTDALILVILLGACALQAALHPGKEIHAYIL 419
+ GY + + +LLSE ++ +A + L ACA AAL GK+IHAY L
Sbjct: 445 VMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYAL 504
Query: 420 RMGVQMDKKLIST-LVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
R +S L+DMY+KCG+++ A ++F N + ++ V + ++ Y HG+ E+A+
Sbjct: 505 RNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEAL 564
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
+F+EM G K D VT + +L A H G ++ G +YFN M + +SP +HYAC++DL
Sbjct: 565 GIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDL 624
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARY 598
GRA +L A+ ++ +P E V+ +FL+ CR++ EL A EK+ L N+ Y
Sbjct: 625 LGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSY 684
Query: 599 VQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
L+N+YA G W ++ RIR MR + GCSWV F VGD +HP IY
Sbjct: 685 TLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIY 744
Query: 659 SVL 661
VL
Sbjct: 745 QVL 747
Score = 179 bits (454), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 144/506 (28%), Positives = 232/506 (45%), Gaps = 57/506 (11%)
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTY--NSMLCGYINAEGYEADALKLFIEMQSADE 119
+IS I L A SL P D Y NS++ Y G L LF M S
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSY-GDNGCANKCLYLFGLMHSLS- 122
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
D +T C ++ +V G HA + T ++ F ++L+ MYS+CR +A
Sbjct: 123 -WTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDA 181
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
+VF+ EM++ W D VSWN++I Y + G
Sbjct: 182 RKVFD------------------------EMSV---W------DVVSWNSIIESYAKLGK 208
Query: 240 AEEGLKLFVRM-GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSS 298
+ L++F RM E G R + T + L C L K++H + + + +I N FV +
Sbjct: 209 PKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGN 268
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK---- 354
+VD+Y KC M+ A ++ V++ S ++M+ GYS G E+A R F+ + E+
Sbjct: 269 CLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKM 328
Query: 355 NVVVWTALFSGYV-KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
+VV W+A SGY + EAL + + G+ + + L+ +L CA AL GKE
Sbjct: 329 DVVTWSAAISGYAQRGLGYEALG--VCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKE 386
Query: 414 IHAYILRMGVQMDKK-------LISTLVDMYSKCGNMTYAEIIFQNFI--ERDLVLYNVM 464
IH Y ++ + + K +I+ L+DMY+KC + A +F + ERD+V + VM
Sbjct: 387 IHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVM 446
Query: 465 IACYAHHGHEEKAILLFEEMLEKG--IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTAD 522
I Y+ HG KA+ L EM E+ +P+A T L A ++ +G++ +
Sbjct: 447 IGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRN 506
Query: 523 YKISPETDHYACMIDLYGRANQLEKA 548
+ + C+ID+Y + + A
Sbjct: 507 QQNAVPLFVSNCLIDMYAKCGSISDA 532
Score = 41.6 bits (96), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLY--NVMIACYA 469
K IH +L G+ + L S L+ Y G +++A + + F D +Y N +I Y
Sbjct: 45 KLIHQKLLSFGI-LTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYG 103
Query: 470 HHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
+G K + LF M PD TF + A SV GE
Sbjct: 104 DNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGE 147
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 328 bits (840), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 201/645 (31%), Positives = 326/645 (50%), Gaps = 107/645 (16%)
Query: 30 QLIHIYSK-HNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLV 88
LI ++ K N + K+FD+M E NV +W +I+ C++
Sbjct: 207 SLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQM------------------- 247
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLH 148
G+ +A++ F++M + D+FT++S + C +L N+ G+QLH
Sbjct: 248 -------------GFPREAIRFFLDMVLSG--FESDKFTLSSVFSACAELENLSLGKQLH 292
Query: 149 AFMVKTS--NDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREG 206
++ +++ +D SL+DMY+KC +G
Sbjct: 293 SWAIRSGLVDDVE----CSLVDMYAKCSA-----------------------------DG 319
Query: 207 EMEMALKTFWRQPELNDAVSWNTLISGYVQNGD-AEEGLKLFVRMGENG-VRWNEHTFAS 264
++ K F R E + +SW LI+GY++N + A E + LF M G V N TF+S
Sbjct: 320 SVDDCRKVFDRM-EDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSS 378
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
A AC L + + K++ K GL SN V++ ++ ++ K + M
Sbjct: 379 AFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRM-------------- 424
Query: 325 SFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVT 384
E+A+R F+SL+EKN+V + G + N E F LLSE
Sbjct: 425 -----------------EDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITE 467
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
+E V+ A LL A ++ G++IH+ ++++G+ ++ + + L+ MYSKCG++
Sbjct: 468 RELGVS-AFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSID 526
Query: 445 YAEIIFQNFIE-RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAF 503
A +F NF+E R+++ + MI +A HG + + F +M+E+G+KP+ VT+VAILSA
Sbjct: 527 TASRVF-NFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSAC 585
Query: 504 RHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVI 563
H G V G ++FNSM D+KI P+ +HYACM+DL RA L A EF+ ++P + D ++
Sbjct: 586 SHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLV 645
Query: 564 LGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRG 623
+FL CR++ N EL A K+L L+ N A Y+QL+N+YA G W E +R++M+
Sbjct: 646 WRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKE 705
Query: 624 MKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
+ GCSW+ V +IH F VGD +HP + IY L E+
Sbjct: 706 RNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEI 750
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/510 (25%), Positives = 239/510 (46%), Gaps = 81/510 (15%)
Query: 48 FDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPH---KDLVTYNSMLCGYINAEGYE 104
FD P+ ++ N++IS KS D +A +F++ +D+V++++M+ Y N G E
Sbjct: 91 FDIEPDSVLY--NSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGN-NGRE 147
Query: 105 ADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVS 164
DA+K+F+E + + +++ T+ + C VG GR F++KT + S V
Sbjct: 148 LDAIKVFVEF--LELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVG 205
Query: 165 -SLIDMYSKCR-CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN 222
SLIDM+ K +E A +VF+ + ELN
Sbjct: 206 CSLIDMFVKGENSFENAYKVFD--------------------------------KMSELN 233
Query: 223 DAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIH 282
V+W +I+ +Q G E ++ F+ M +G ++ T +S SAC L N+ K++H
Sbjct: 234 -VVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLH 292
Query: 283 SWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNME 342
SW +++GL+ + V +VD+Y KC S G+++
Sbjct: 293 SWAIRSGLVDD--VECSLVDMYAKC----------------------------SADGSVD 322
Query: 343 EARRHFDSLTEKNVVVWTALFSGYVKAQN--CEALFDLLSEFVTKEGVVTDALILVILLG 400
+ R+ FD + + +V+ WTAL +GY+K N EA+ +L SE +T+ V +
Sbjct: 323 DCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAI-NLFSEMITQGHVEPNHFTFSSAFK 381
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL 460
AC + GK++ + G+ + + ++++ M+ K M A+ F++ E++LV
Sbjct: 382 ACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVS 441
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
YN + + + E+A L E+ E+ + A TF ++LS + GS+ GE+ + +
Sbjct: 442 YNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVV 501
Query: 521 ADYKISPETDHYAC--MIDLYGRANQLEKA 548
K+ + C +I +Y + ++ A
Sbjct: 502 ---KLGLSCNQPVCNALISMYSKCGSIDTA 528
Score = 109 bits (272), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 110/484 (22%), Positives = 215/484 (44%), Gaps = 89/484 (18%)
Query: 112 IEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYS 171
+++ + D MD T +S L C++ + G+ +HA +++ + +SLI +YS
Sbjct: 49 LDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYS 108
Query: 172 KCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLI 231
K +A VFE ++ F ++ D VSW+ ++
Sbjct: 109 KSGDSAKAEDVFE--------------------------TMRRFGKR----DVVSWSAMM 138
Query: 232 SGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG-L 290
+ Y NG + +K+FV E G+ N++ + + + AC V + +++K G
Sbjct: 139 ACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHF 198
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
S+ V ++D++ K EN + E A + FD
Sbjct: 199 ESDVCVGCSLIDMFVKGEN------------------------------SFENAYKVFDK 228
Query: 351 LTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHP 410
++E NVV WT + + ++ + V G +D L + ACA L
Sbjct: 229 MSELNVVTWTLMITRCMQMGFPREAIRFFLDMVL-SGFESDKFTLSSVFSACAELENLSL 287
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKC---GNMTYAEIIFQNFIERDLVLYNVMIAC 467
GK++H++ +R G+ D + +LVDMY+KC G++ +F + ++ + +I
Sbjct: 288 GKQLHSWAIRSGLVDDVE--CSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITG 345
Query: 468 YAHHGH-EEKAILLFEEMLEKG-IKPDAVTFVAILSAFRHCGSVE--------MGEKYFN 517
Y + + +AI LF EM+ +G ++P+ TF SAF+ CG++ +G+ +
Sbjct: 346 YMKNCNLATEAINLFSEMITQGHVEPNHFTFS---SAFKACGNLSDPRVGKQVLGQAFKR 402
Query: 518 SMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLN-VCRLNRN 576
+ ++ ++ +I ++ +++++E A +S+ +E++ V +FL+ CR N N
Sbjct: 403 GLASNSSVANS------VISMFVKSDRMEDAQRAFESL-SEKNLVSYNTFLDGTCR-NLN 454
Query: 577 AELA 580
E A
Sbjct: 455 FEQA 458
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 108/255 (42%), Gaps = 67/255 (26%)
Query: 15 QAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQ 74
QA K GL + N +I ++ K + + ++++ F+ + E+N+ S+NT + ++ + +Q
Sbjct: 398 QAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQ 457
Query: 75 ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNL 134
A KL E+ + + + FT S L+
Sbjct: 458 --------------------------------AFKLLSEI--TERELGVSAFTFASLLSG 483
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
+ ++ G Q+H+ +VK + ++LI MYSKC + A RVF E N+I
Sbjct: 484 VANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVF-NFMENRNVI- 541
Query: 195 KNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG 254
SW ++I+G+ ++G A L+ F +M E G
Sbjct: 542 -------------------------------SWTSMITGFAKHGFAIRVLETFNQMIEEG 570
Query: 255 VRWNEHTFASALSAC 269
V+ NE T+ + LSAC
Sbjct: 571 VKPNEVTYVAILSAC 585
Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIK 68
H Q +K GL+ N LI +YSK + + ++F+ M RNV SW ++I+ K
Sbjct: 497 HSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAK 552
Score = 33.9 bits (76), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Query: 464 MIACYAHHGHEEKAILLFEEMLEKGIKP-DAVTFVAILSAFRHCGSVEMGEKYFNSMTAD 522
+I + + G A+ + M GI+P D+VTF ++L + +G K ++ +
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLG-KLVHARLIE 90
Query: 523 YKISPETDHYACMIDLYGRANQLEKAIEFMKSI 555
+ I P++ Y +I LY ++ KA + +++
Sbjct: 91 FDIEPDSVLYNSLISLYSKSGDSAKAEDVFETM 123
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 328 bits (840), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 210/680 (30%), Positives = 351/680 (51%), Gaps = 15/680 (2%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
+R +L+ A H I G N+LI +Y K + L +R+LFDE+ E + +
Sbjct: 25 LRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIART 84
Query: 61 TIISACIKSHDLKQARSLFDSSP--HKDLVTYNSMLCGYI-NAEGYEADALKLFIEMQSA 117
T++S S D+ AR +F+ +P +D V YN+M+ G+ N +GY A + LF +M+
Sbjct: 85 TMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSA--INLFCKMKH- 141
Query: 118 DEHIRMDEFTVTSTL-NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKC--- 173
E + D FT S L L + + Q HA +K+ ++L+ +YSKC
Sbjct: 142 -EGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASS 200
Query: 174 -RCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
A +VF+ E+ + S M+ + G ++ + + V++N +IS
Sbjct: 201 PSLLHSARKVFDEILEK-DERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMIS 259
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
GYV G +E L++ RM +G+ +E T+ S + AC ++ K++H++VL+ S
Sbjct: 260 GYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFS 319
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
F +S +V +Y KC + A ++ ++ S ++++ GY G++ EA+ F +
Sbjct: 320 FHFDNS-LVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMK 378
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
EKN++ W + SG + E L S + +EG + +CA+ A G+
Sbjct: 379 EKNILSWMIMISGLAENGFGEEGLKLFS-CMKREGFEPCDYAFSGAIKSCAVLGAYCNGQ 437
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
+ HA +L++G + L+ MY+KCG + A +F+ D V +N +IA HG
Sbjct: 438 QYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHG 497
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
H +A+ ++EEML+KGI+PD +T + +L+A H G V+ G KYF+SM Y+I P DHY
Sbjct: 498 HGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHY 557
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
A +IDL R+ + A ++S+P + A I + L+ CR++ N EL A +KL L
Sbjct: 558 ARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIP 617
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
+ Y+ L+N++AA G W E+ R+RK MR + CSW+ +E ++H F V D SHP
Sbjct: 618 EHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHP 677
Query: 653 KTNAIYSVLAIFTGELYEIA 672
+ A+Y L E+ +
Sbjct: 678 EAEAVYIYLQDLGKEMRRLG 697
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 327 bits (838), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 204/643 (31%), Positives = 318/643 (49%), Gaps = 70/643 (10%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K+ + +T +N +++YSK L +R F E NVFS+N I+ A K +
Sbjct: 31 HALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKI 90
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
AR LFD P D V+YN+++ GY +A A A+ LF M+ +D FT++ +
Sbjct: 91 HIARQLFDEIPQPDTVSYNTLISGYADARETFA-AMVLFKRMRKLG--FEVDGFTLSGLI 147
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C V +QLH F +VS D YS VN
Sbjct: 148 AACCD--RVDLIKQLHCF-----------SVSGGFDSYS-----------------SVN- 176
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
NA V + G + A+ F+ EL D VSWN++I Y Q+ + + L L+ M
Sbjct: 177 ---NAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIF 233
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G + + T AS L+A L ++ ++ H ++K G N V SG++D Y KC +
Sbjct: 234 KGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCD- 292
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
M ++ + F + ++VVW + SGY + N
Sbjct: 293 ---------------------------GMYDSEKVFQEILSPDLVVWNTMISGY--SMNE 323
Query: 373 EALFDLLSEF--VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
E + + F + + G D V + AC+ ++ K+IH ++ + ++ +
Sbjct: 324 ELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISV 383
Query: 431 S-TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGI 489
+ L+ +Y K GN+ A +F E + V +N MI YA HGH +A+LL++ ML+ GI
Sbjct: 384 NNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGI 443
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAI 549
P+ +TFVA+LSA HCG V+ G++YFN+M +KI PE +HY+CMIDL GRA +LE+A
Sbjct: 444 APNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAE 503
Query: 550 EFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEG 609
F+ ++P + +V + L CR ++N LA A +L+ ++ YV LAN+YA
Sbjct: 504 RFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADAR 563
Query: 610 NWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
W EM +RK MRG + + GCSW+ V+ + H+F D SHP
Sbjct: 564 KWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHP 606
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 184/418 (44%), Gaps = 41/418 (9%)
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
G+ LHA VK+ +S + + +++YSKC A F TEE N+ S N +V A
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYS-TEEPNVFSYNVIVKAYA 85
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
++ ++ +A + F P+ D VS+NTLISGY + + LF RM + G + T +
Sbjct: 86 KDSKIHIARQLFDEIPQ-PDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLS 144
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
++ACC V K++H F SG D Y V
Sbjct: 145 GLIAACCD--RVDLIKQLHC-----------FSVSGGFDSY---------------SSVN 176
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTE-KNVVVWTALFSGYVKAQNCEALFDLLSEF 382
N+F + YS G + EA F + E ++ V W ++ Y + + L E
Sbjct: 177 NAF-----VTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEM 231
Query: 383 VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCG- 441
+ K G D L +L A L G++ H +++ G + + S L+D YSKCG
Sbjct: 232 IFK-GFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGG 290
Query: 442 --NMTYAEIIFQNFIERDLVLYNVMIACYAHHGH-EEKAILLFEEMLEKGIKPDAVTFVA 498
M +E +FQ + DLV++N MI+ Y+ + E+A+ F +M G +PD +FV
Sbjct: 291 CDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVC 350
Query: 499 ILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIP 556
+ SA + S ++ + S +I LY ++ L+ A +P
Sbjct: 351 VTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP 408
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 118/252 (46%), Gaps = 4/252 (1%)
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
N W TF L R++ K +H+ +K+ + S+ ++S+ V++Y KC ++Y
Sbjct: 2 NQTPWKFKTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSY 61
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
A + N FS + ++ Y+ + AR+ FD + + + V + L SGY A+
Sbjct: 62 ARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARET 121
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIST 432
A L + K G D L L+ AC + L K++H + + G + +
Sbjct: 122 FAAMVLFKR-MRKLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNA 178
Query: 433 LVDMYSKCGNMTYAEIIFQNFIE-RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
V YSK G + A +F E RD V +N MI Y H KA+ L++EM+ KG K
Sbjct: 179 FVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKI 238
Query: 492 DAVTFVAILSAF 503
D T ++L+A
Sbjct: 239 DMFTLASVLNAL 250
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 326 bits (836), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 195/616 (31%), Positives = 320/616 (51%), Gaps = 82/616 (13%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
ERN N++++ +K+ + AR +FD +D++++NS++ GY+ + G L +F+
Sbjct: 228 ERNSVG-NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV-SNGLAEKGLSVFV 285
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
+M + I +D T+ S C + GR +H+ VK ++L+DMYSK
Sbjct: 286 QMLVSG--IEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSK 343
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C G+++ A K +R+ VS+ ++I+
Sbjct: 344 C--------------------------------GDLDSA-KAVFREMSDRSVVSYTSMIA 370
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
GY + G A E +KLF M E G+ + +T + L+ C R + K +H W+ +N L
Sbjct: 371 GYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGF 430
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
+ FVS+ ++D+Y KC G+M+EA F +
Sbjct: 431 DIFVSNALMDMYAKC-------------------------------GSMQEAELVFSEMR 459
Query: 353 EKNVVVWTALFSGYVKAQNCEA-----LFDLLSEFVTKEGVVTDALILVILLGACALQAA 407
K+++ W + GY K NC A LF+LL E ++ D + +L ACA +A
Sbjct: 460 VKDIISWNTIIGGYSK--NCYANEALSLFNLLLE---EKRFSPDERTVACVLPACASLSA 514
Query: 408 LHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIAC 467
G+EIH YI+R G D+ + ++LVDMY+KCG + A ++F + +DLV + VMIA
Sbjct: 515 FDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAG 574
Query: 468 YAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISP 527
Y HG ++AI LF +M + GI+ D ++FV++L A H G V+ G ++FN M + KI P
Sbjct: 575 YGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEP 634
Query: 528 ETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKL 587
+HYAC++D+ R L KA F++++P DA I G+ L CR++ + +LA + EK+
Sbjct: 635 TVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKV 694
Query: 588 LRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFT 645
LE N YV +AN+YA W ++ R+RK++ RG++ N GCSW+ ++ ++IF
Sbjct: 695 FELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKN--PGCSWIEIKGRVNIFV 752
Query: 646 VGDVSHPKTNAIYSVL 661
GD S+P+T I + L
Sbjct: 753 AGDSSNPETENIEAFL 768
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/477 (25%), Positives = 211/477 (44%), Gaps = 72/477 (15%)
Query: 71 DLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTS 130
DLK+A +FD + + +N +L + G + ++ LF +M S+ + MD +T +
Sbjct: 144 DLKEASRVFDEVKIEKALFWN-ILMNELAKSGDFSGSIGLFKKMMSSG--VEMDSYTFSC 200
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
L +V G QLH F++K+ +SL+ Y K + + A +VF+ TE
Sbjct: 201 VSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTER- 259
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
D +SWN++I+GYV NG AE+GL +FV+M
Sbjct: 260 --------------------------------DVISWNSIINGYVSNGLAEKGLSVFVQM 287
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
+G+ + T S + C R + + +HS +K + ++D+Y KC ++
Sbjct: 288 LVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDL 347
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
+ A+++ R+ S +SMI GY+ +G EA + F+ + E
Sbjct: 348 DSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE----------------- 390
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
EG+ D + +L CA L GK +H +I + D +
Sbjct: 391 ---------------EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVS 435
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML-EKGI 489
+ L+DMY+KCG+M AE++F +D++ +N +I Y+ + + +A+ LF +L EK
Sbjct: 436 NALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRF 495
Query: 490 KPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA-CMIDLYGRANQL 545
PD T +L A + + G + + + S H A ++D+Y + L
Sbjct: 496 SPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR--HVANSLVDMYAKCGAL 550
Score = 142 bits (359), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 175/384 (45%), Gaps = 75/384 (19%)
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS-----LIDMYSKCRCYE 177
+D T+ S L LC ++ G+++ F+ +GF + S L MY+ C +
Sbjct: 92 IDPRTLCSVLQLCADSKSLKDGKEVDNFI-----RGNGFVIDSNLGSKLSLMYTNCGDLK 146
Query: 178 EACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQN 237
EA RVF+ + ++ A+ WN L++ ++
Sbjct: 147 EASRVFD---------------------------------EVKIEKALFWNILMNELAKS 173
Query: 238 GDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVS 297
GD + LF +M +GV + +TF+ + LR+V +++H ++LK+G
Sbjct: 174 GDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGF------- 226
Query: 298 SGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVV 357
G RNS +S++ Y ++ AR+ FD +TE++V+
Sbjct: 227 -----------------------GERNSVG-NSLVAFYLKNQRVDSARKVFDEMTERDVI 262
Query: 358 VWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
W ++ +GYV E + + + G+ D +V + CA + G+ +H+
Sbjct: 263 SWNSIINGYVSNGLAEKGLSVFVQMLVS-GIEIDLATIVSVFAGCADSRLISLGRAVHSI 321
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
++ + + +TL+DMYSKCG++ A+ +F+ +R +V Y MIA YA G +A
Sbjct: 322 GVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEA 381
Query: 478 ILLFEEMLEKGIKPDAVTFVAILS 501
+ LFEEM E+GI PD T A+L+
Sbjct: 382 VKLFEEMEEEGISPDVYTVTAVLN 405
>sp|Q9FXA9|PPR83_ARATH Putative pentatricopeptide repeat-containing protein At1g56570
OS=Arabidopsis thaliana GN=PCMP-E64 PE=3 SV=1
Length = 611
Score = 324 bits (830), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 188/622 (30%), Positives = 322/622 (51%), Gaps = 72/622 (11%)
Query: 52 PERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLF 111
P+++ +I + + +++ARSLFD P +D+V + +M+ GY ++ Y A A + F
Sbjct: 41 PKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSN-YNARAWECF 99
Query: 112 IEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYS 171
EM + +EFT++S L C + + +G +H +VK + S + +++++MY+
Sbjct: 100 HEM--VKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYA 157
Query: 172 KCRC-YEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTL 230
C E AC +F R ++ + V+W TL
Sbjct: 158 TCSVTMEAACLIF---------------------------------RDIKVKNDVTWTTL 184
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL 290
I+G+ GD GLK++ +M + A+ A + +V K+IH+ V+K G
Sbjct: 185 ITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGF 244
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
SN V + I+D+YC+C G + EA+ +F
Sbjct: 245 QSNLPVMNSILDLYCRC-------------------------------GYLSEAKHYFHE 273
Query: 351 LTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHP 410
+ +K+++ W L S ++ + EAL L+ + +G V + L+ ACA AAL+
Sbjct: 274 MEDKDLITWNTLISELERSDSSEAL--LMFQRFESQGFVPNCYTFTSLVAACANIAALNC 331
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER-DLVLYNVMIACYA 469
G+++H I R G + +L + L+DMY+KCGN+ ++ +F ++R +LV + M+ Y
Sbjct: 332 GQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYG 391
Query: 470 HHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPET 529
HG+ +A+ LF++M+ GI+PD + F+A+LSA RH G VE G KYFN M ++Y I+P+
Sbjct: 392 SHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDR 451
Query: 530 DHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNR-NAELAGEAEEKLL 588
D Y C++DL GRA ++ +A E ++ +P + D G+ L C+ ++ N ++ A K++
Sbjct: 452 DIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVM 511
Query: 589 RLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGD 648
L+ YV L+ +YAAEG W + R+RK MR M + AG SW+ VE+++ F V D
Sbjct: 512 ELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSD 571
Query: 649 VSHPKTNAIYSVLAIFTGELYE 670
P +++YSVL + E E
Sbjct: 572 KMCPNASSVYSVLGLLIEETRE 593
Score = 72.8 bits (177), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 112/258 (43%), Gaps = 47/258 (18%)
Query: 12 CHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHD 71
C A++A ++ ++TT + IH + + N+ N+I+ +
Sbjct: 215 CITIAVRASASIDSVTTGKQIHA-----------SVIKRGFQSNLPVMNSILDLYCRCGY 263
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
L +A+ F KDL+T+N+++ ++ EA L +F +S + + +T TS
Sbjct: 264 LSEAKHYFHEMEDKDLITWNTLISELERSDSSEA--LLMFQRFES--QGFVPNCYTFTSL 319
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
+ C + + G+QLH + + + + ++LIDMY+KC ++ RVF + N
Sbjct: 320 VAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRN 379
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
L VSW +++ GY +G E ++LF +M
Sbjct: 380 L--------------------------------VSWTSMMIGYGSHGYGAEAVELFDKMV 407
Query: 252 ENGVRWNEHTFASALSAC 269
+G+R + F + LSAC
Sbjct: 408 SSGIRPDRIVFMAVLSAC 425
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 323 bits (829), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 193/645 (29%), Positives = 324/645 (50%), Gaps = 103/645 (15%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLV 88
L+ +Y K L+ + K+F MPERN ++W+T
Sbjct: 157 TSLVGMYCKAGLVEDGLKVFAYMPERNTYTWST--------------------------- 189
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLH 148
M+ GY G +A+K+F E ++ T+ L+ + VG GRQ+H
Sbjct: 190 ----MVSGYAT-RGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIH 244
Query: 149 AFMVKTSNDASGFAV--SSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREG 206
+K N GF ++L+ MYSKC EAC++F+ +
Sbjct: 245 CITIK--NGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDR----------------- 285
Query: 207 EMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASAL 266
++++W+ +++GY QNG++ E +KLF RM G++ +E+T L
Sbjct: 286 ----------------NSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVL 329
Query: 267 SACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSF 326
+AC + ++ K++HS++LK G + F ++ +VD+Y K
Sbjct: 330 NACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKA------------------- 370
Query: 327 SISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK-AQNCEALFDLLSEFVTK 385
G + +AR+ FD L E++V +WT+L SGYV+ + N EAL +L +
Sbjct: 371 ------------GCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEAL--ILYRRMKT 416
Query: 386 EGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTY 445
G++ + + +L AC+ A L GK++H + ++ G ++ + S L MYSKCG++
Sbjct: 417 AGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLED 476
Query: 446 AEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRH 505
++F+ +D+V +N MI+ +H+G ++A+ LFEEML +G++PD VTFV I+SA H
Sbjct: 477 GNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSH 536
Query: 506 CGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILG 565
G VE G YFN M+ + P+ DHYACM+DL RA QL++A EF++S + +
Sbjct: 537 KGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWR 596
Query: 566 SFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMK 625
L+ C+ + EL A EKL+ L + YVQL+ +Y A G ++ R+ K MR
Sbjct: 597 ILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANG 656
Query: 626 GNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYE 670
++ GCSW+ ++++ H+F VGD HP ++ + + ++ E
Sbjct: 657 VSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVCLVSRQMIE 701
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 8/157 (5%)
Query: 405 QAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVM 464
Q L G+ +H I+R G + + LV+ Y+KCG + A IF I +D+V +N +
Sbjct: 27 QRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSL 86
Query: 465 IACYAHHG---HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTA 521
I Y+ +G + LF EM + I P+A T I A S +G + +
Sbjct: 87 ITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVV- 145
Query: 522 DYKISPETDHY--ACMIDLYGRANQLEKAIEFMKSIP 556
K+S D Y ++ +Y +A +E ++ +P
Sbjct: 146 --KMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP 180
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 107/245 (43%), Gaps = 33/245 (13%)
Query: 273 RNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMI 332
RN+ + +H +++ G + ++ +V+ Y KC + A S+ ++ S +S+I
Sbjct: 28 RNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLI 87
Query: 333 VGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDA 392
GYS G + + E ++AQ D+L T G
Sbjct: 88 TGYSQNGGISSSYTVMQLFRE-------------MRAQ------DILPNAYTLAG----- 123
Query: 393 LILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQN 452
I +LQ++ G++ HA +++M D + ++LV MY K G + +F
Sbjct: 124 ----IFKAESSLQSST-VGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAY 178
Query: 453 FIERDLVLYNVMIACYAHHGHEEKAILLFEEML---EKGIKPDAVTFVAILSAFRHCGSV 509
ER+ ++ M++ YA G E+AI +F L E+G D V F A+LS+ V
Sbjct: 179 MPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSSLAATIYV 237
Query: 510 EMGEK 514
+G +
Sbjct: 238 GLGRQ 242
>sp|O49287|PP127_ARATH Putative pentatricopeptide repeat-containing protein At1g77010,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E5 PE=3
SV=1
Length = 695
Score = 323 bits (829), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 205/651 (31%), Positives = 341/651 (52%), Gaps = 45/651 (6%)
Query: 18 KAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT---------------- 61
K L+ I N L+ +YS+ + +R LFDEMP+RN FSWNT
Sbjct: 55 KGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLR 114
Query: 62 ---------------IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEAD 106
++S K+ +L AR LF++ P KD+VT NS+L GYI GY +
Sbjct: 115 FFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYI-LNGYAEE 173
Query: 107 ALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSL 166
AL+LF E+ + D T+T+ L C +L + G+Q+HA ++ + SSL
Sbjct: 174 ALRLFKEL-----NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSL 228
Query: 167 IDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVS 226
+++Y+KC A + E E + S +A+++ G + + F R+ +
Sbjct: 229 VNVYAKCGDLRMASYMLEQIREPDDH-SLSALISGYANCGRVNESRGLFDRKSN-RCVIL 286
Query: 227 WNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVL 286
WN++ISGY+ N E L LF M N R + T A+ ++AC GL ++ K++H
Sbjct: 287 WNSMISGYIANNMKMEALVLFNEM-RNETREDSRTLAAVINACIGLGFLETGKQMHCHAC 345
Query: 287 KNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARR 346
K GLI + V+S ++D+Y KC + A + ++ ++SMI Y G +++A+R
Sbjct: 346 KFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKR 405
Query: 347 HFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF--VTKEGVVTDALILVILLGACAL 404
F+ + K+++ W ++ +G+ +QN + L F + K + TD + L ++ ACA
Sbjct: 406 VFERIENKSLISWNSMTNGF--SQN-GCTVETLEYFHQMHKLDLPTDEVSLSSVISACAS 462
Query: 405 QAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVM 464
++L G+++ A +G+ D+ + S+L+D+Y KCG + + +F ++ D V +N M
Sbjct: 463 ISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSM 522
Query: 465 IACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYK 524
I+ YA +G +AI LF++M GI+P +TF+ +L+A +CG VE G K F SM D+
Sbjct: 523 ISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHG 582
Query: 525 ISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAE 584
P+ +H++CM+DL RA +E+AI ++ +P + D + S L C N + +A
Sbjct: 583 FVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAA 642
Query: 585 EKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWV 635
EK++ LE N YVQL+ ++A G+W +RK MR + G SW
Sbjct: 643 EKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSWT 693
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/511 (25%), Positives = 251/511 (49%), Gaps = 49/511 (9%)
Query: 8 EALIC----HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII 63
EAL C H Q + G+ + + L+++Y+K LR + + +++ E + S + +I
Sbjct: 201 EALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALI 260
Query: 64 SACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRM 123
S + ++R LFD ++ ++ +NSM+ GYI A + +AL LF EM++ R
Sbjct: 261 SGYANCGRVNESRGLFDRKSNRCVILWNSMISGYI-ANNMKMEALVLFNEMRN---ETRE 316
Query: 124 DEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVF 183
D T+ + +N C+ L + G+Q+H K S+L+DMYSKC EAC++F
Sbjct: 317 DSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLF 376
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEG 243
E + I N+M+ G ++ A + F R E +SWN++ +G+ QNG E
Sbjct: 377 SE-VESYDTILLNSMIKVYFSCGRIDDAKRVFER-IENKSLISWNSMTNGFSQNGCTVET 434
Query: 244 LKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
L+ F +M + + +E + +S +SAC + +++ +++ + GL S+ VSS ++D+
Sbjct: 435 LEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDL 494
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
YCKC G +E RR FD++ + + V W ++
Sbjct: 495 YCKC-------------------------------GFVEHGRRVFDTMVKSDEVPWNSMI 523
Query: 364 SGY-VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI-HAYILRM 421
SGY Q EA+ DL + ++ G+ + +++L AC + G+++ + +
Sbjct: 524 SGYATNGQGFEAI-DLFKK-MSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDH 581
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
G DK+ S +VD+ ++ G + A ++ + + D +++ ++ +G++
Sbjct: 582 GFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKA 641
Query: 481 FEEMLEKGIKPD-AVTFVAILSAFRHCGSVE 510
E+++E ++P+ +V +V + + F G E
Sbjct: 642 AEKIIE--LEPENSVAYVQLSAIFATSGDWE 670
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 107/268 (39%), Gaps = 53/268 (19%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
+ SL L E + +A GL + ++ LI +Y K + R++FD M + + WN
Sbjct: 463 ISSLELGEQVF--ARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWN 520
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGY-INAEGYEADALKLFIEMQSADE 119
++IS GY N +G+E A+ LF +M A
Sbjct: 521 SMIS-------------------------------GYATNGQGFE--AIDLFKKMSVAG- 546
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQL-------HAFMVKTSNDASGFAVSSLIDMYSK 172
IR + T L C V GR+L H F+ D F S ++D+ ++
Sbjct: 547 -IRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFV----PDKEHF--SCMVDLLAR 599
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPEL--NDAVSWNTL 230
EEA + E +V+ ++++ C G M K + EL ++V++ L
Sbjct: 600 AGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQL 659
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWN 258
+ + +GD E + M EN V N
Sbjct: 660 SAIFATSGDWESSALVRKLMRENNVTKN 687
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 322 bits (824), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 194/616 (31%), Positives = 315/616 (51%), Gaps = 76/616 (12%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N++I+ +K ++++AR LFD + K +VT+NSM+ GY A G + +AL +F M+
Sbjct: 233 NSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA-ANGLDLEALGMFYSMRL--N 289
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
++R+ E + S + LC L + F QLH +VK ++L+ YSKC +A
Sbjct: 290 YVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDA 349
Query: 180 CRVFE--GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQN 237
R+F+ GC + + VSW +ISG++QN
Sbjct: 350 LRLFKEIGC----------------------------------VGNVVSWTAMISGFLQN 375
Query: 238 GDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVS 297
EE + LF M GVR NE T++ L+A V E+H+ V+K + V
Sbjct: 376 DGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL----PVISPSEVHAQVVKTNYERSSTVG 431
Query: 298 SGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVV 357
+ ++D Y K G +EEA + F + +K++V
Sbjct: 432 TALLDAYVKL-------------------------------GKVEEAAKVFSGIDDKDIV 460
Query: 358 VWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACA-LQAALHPGKEIHA 416
W+A+ +GY + EA + E +TK G+ + +L CA A++ GK+ H
Sbjct: 461 AWSAMLAGYAQTGETEAAIKMFGE-LTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHG 519
Query: 417 YILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
+ ++ + + S L+ MY+K GN+ AE +F+ E+DLV +N MI+ YA HG K
Sbjct: 520 FAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMK 579
Query: 477 AILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMI 536
A+ +F+EM ++ +K D VTF+ + +A H G VE GEKYF+ M D KI+P +H +CM+
Sbjct: 580 ALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMV 639
Query: 537 DLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKA 596
DLY RA QLEKA++ ++++P + I + L CR+++ EL A EK++ ++ + A
Sbjct: 640 DLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSA 699
Query: 597 RYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNA 656
YV L+N+YA G+W E ++RK M + G SW+ V+++ + F GD SHP +
Sbjct: 700 AYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQ 759
Query: 657 IYSVLAIFTGELYEIA 672
IY L + L ++
Sbjct: 760 IYMKLEDLSTRLKDLG 775
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 147/582 (25%), Positives = 247/582 (42%), Gaps = 129/582 (22%)
Query: 67 IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEF 126
+ S L A +LFD SP +D +Y S+L G+ + +G +A +LF+ + + MD
Sbjct: 38 VSSSRLYNAHNLFDKSPGRDRESYISLLFGF-SRDGRTQEAKRLFLNIHRLG--MEMDCS 94
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTS--NDASGFAVSSLIDMYSKCRCYEEACRVFE 184
+S L + L + FGRQLH +K +D S +SL+D Y K +++ +VF+
Sbjct: 95 IFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVS--VGTSLVDTYMKGSNFKDGRKVFD 152
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
E + V+W TLISGY +N +E L
Sbjct: 153 EMKER---------------------------------NVVTWTTLISGYARNSMNDEVL 179
Query: 245 KLFVRMGENGVRWNEHTFASALSACC----GLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
LF+RM G + N TFA+AL G R + ++H+ V+KNGL VS+ +
Sbjct: 180 TLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGL----QVHTVVVKNGLDKTIPVSNSL 235
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL--------- 351
+++Y KC N+ A + V++ + +SMI GY+ G EA F S+
Sbjct: 236 INLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSE 295
Query: 352 ------------------TEK---NVVVWTALFSGYVKA------QNCEALFDLLSEF-- 382
TE+ +VV + LF ++ C A+ D L F
Sbjct: 296 SSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKE 355
Query: 383 --------------------------------VTKEGVVTDALILVILLGACALQAALHP 410
+ ++GV + ++L A + + P
Sbjct: 356 IGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPV---ISP 412
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
E+HA +++ + + + L+D Y K G + A +F ++D+V ++ M+A YA
Sbjct: 413 S-EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQ 471
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSV--EMGE-KYFNSMTADYKISP 527
G E AI +F E+ + GIKP+ TF +IL+ C + MG+ K F+ ++
Sbjct: 472 TGETEAAIKMFGELTKGGIKPNEFTFSSILNV---CAATNASMGQGKQFHGFAIKSRLDS 528
Query: 528 ETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLN 569
+ ++ +Y + +E A E K E+D V S ++
Sbjct: 529 SLCVSSALLTMYAKKGNIESAEEVFKR-QREKDLVSWNSMIS 569
Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 120/513 (23%), Positives = 213/513 (41%), Gaps = 114/513 (22%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMP-ERNVFSW 59
++ L E L C V +K G L+ YSK + ++ +LF E+ NV SW
Sbjct: 308 LKELRFTEQLHCSV--VKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSW 365
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
+IS G++ +G E +A+ LF EM+ +
Sbjct: 366 TAMIS-------------------------------GFLQNDGKE-EAVDLFSEMKR--K 391
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
+R +EFT + L L V ++HA +VKT+ + S ++L+D Y K EEA
Sbjct: 392 GVRPNEFTYSVILT----ALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEA 447
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
+VF G ++ ++++ +AM+A + GE E A+K F G+
Sbjct: 448 AKVFSGIDDK-DIVAWSAMLAGYAQTGETEAAIKMF----------------------GE 484
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLR-NVKCAKEIHSWVLKNGLISNPFVSS 298
+G G++ NE TF+S L+ C ++ K+ H + +K+ L S+ VSS
Sbjct: 485 LTKG----------GIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSS 534
Query: 299 GIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVV 358
++ +Y K N+ AE + + ++ S +SMI GY+ G +A + D E
Sbjct: 535 ALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHG---QAMKALDVFKE----- 586
Query: 359 WTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
+ K V D + + + AC + G++ +
Sbjct: 587 ------------------------MKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIM 622
Query: 419 LR-MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER--DLVLYNVMIACYAHHGHEE 475
+R + K+ S +VD+YS+ G + A + +N + ++ AC H E
Sbjct: 623 VRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHK-KTE 681
Query: 476 KAILLFEEMLEKGIKP-DAVTFVAILSAFRHCG 507
L E+++ +KP D+ +V + + + G
Sbjct: 682 LGRLAAEKII--AMKPEDSAAYVLLSNMYAESG 712
>sp|Q9SKQ4|PP167_ARATH Pentatricopeptide repeat-containing protein At2g21090
OS=Arabidopsis thaliana GN=PCMP-E48 PE=2 SV=1
Length = 597
Score = 321 bits (823), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 187/545 (34%), Positives = 301/545 (55%), Gaps = 7/545 (1%)
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS-LIDMYSKCRCYEEA 179
IR+ + S L C ++ G+ +H + T +S+ LI MY KC +A
Sbjct: 42 IRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDA 101
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
C+VF+ NL S N MV+ + G + A F PE D VSWNT++ GY Q+G+
Sbjct: 102 CKVFDQMHLR-NLYSWNNMVSGYVKSGMLVRARVVFDSMPE-RDVVSWNTMVIGYAQDGN 159
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
E L + +G+++NE +FA L+AC R ++ ++ H VL G +SN +S
Sbjct: 160 LHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCS 219
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
I+D Y KC M A+ V++ +++I GY+ G+ME A + F + EKN V W
Sbjct: 220 IIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSW 279
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
TAL +GYV+ + DL + + GV + L A A A+L GKEIH Y++
Sbjct: 280 TALIAGYVRQGSGNRALDLFRKMIAL-GVKPEQFTFSSCLCASASIASLRHGKEIHGYMI 338
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER-DLVLYNVMIACYAHHGHEEKAI 478
R V+ + +IS+L+DMYSK G++ +E +F+ ++ D V +N MI+ A HG KA+
Sbjct: 339 RTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKAL 398
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
+ ++M++ ++P+ T V IL+A H G VE G ++F SMT + I P+ +HYAC+IDL
Sbjct: 399 RMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDL 458
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARY 598
GRA ++ + ++ +P E D I + L VCR++ N EL +A ++L++L+ + A Y
Sbjct: 459 LGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPY 518
Query: 599 VQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVS--HPKTNA 656
+ L+++YA G W + ++R M+ + N+ SW+ +E ++ FTV D S H +
Sbjct: 519 ILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEE 578
Query: 657 IYSVL 661
IY +L
Sbjct: 579 IYFIL 583
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 134/502 (26%), Positives = 245/502 (48%), Gaps = 49/502 (9%)
Query: 25 TITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPH 84
T+ +N LI +Y K ++ K+FD+M RN++SWN ++S +KS L +AR +FDS P
Sbjct: 82 TLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPE 141
Query: 85 KDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFG 144
+D+V++N+M+ GY +G +AL + E + + I+ +EF+ L CVK +
Sbjct: 142 RDVVSWNTMVIGYAQ-DGNLHEALWFYKEFRRSG--IKFNEFSFAGLLTACVKSRQLQLN 198
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT-EEVNLISKNAMVAACC 203
RQ H ++ ++ S+ID Y+KC E A R F+ T +++++ + +++
Sbjct: 199 RQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWT--TLISGYA 256
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
+ G+ME A K F PE N VSW LI+GYV+ G L LF +M GV+ + TF+
Sbjct: 257 KLGDMEAAEKLFCEMPEKN-PVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFS 315
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
S L A + +++ KEIH ++++ + N V S ++D+Y K
Sbjct: 316 SCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSK----------------- 358
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEK-NVVVWTALFSGYVKAQNCEALFDLLSEF 382
G++E + R F +K + V W + S + +L +
Sbjct: 359 --------------SGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDM 404
Query: 383 VTKEGVVTDALILVILLGACALQAALHPG-KEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
+ K V + LV++L AC+ + G + + ++ G+ D++ + L+D+ + G
Sbjct: 405 I-KFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAG 463
Query: 442 NMTYAEI---IFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPD-AVTFV 497
+ E+ I + E D ++N ++ HG+EE +E+++ + P+ + ++
Sbjct: 464 --CFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIK--LDPESSAPYI 519
Query: 498 AILSAFRHCGSVEMGEKYFNSM 519
+ S + G E+ EK M
Sbjct: 520 LLSSIYADHGKWELVEKLRGVM 541
Score = 113 bits (283), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 155/374 (41%), Gaps = 34/374 (9%)
Query: 228 NTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLK 287
+ +S + + + + + + G+R AS L C +++K K IH +
Sbjct: 15 QSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKI 74
Query: 288 NGLI-SNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARR 346
G N +S+ ++ +Y KC A + +RN +S ++M+ GY G + AR
Sbjct: 75 TGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARV 134
Query: 347 HFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQA 406
FDS+ E++VV W + GY + N EF + G+ + LL AC
Sbjct: 135 VFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEF-RRSGIKFNEFSFAGLLTACVKSR 193
Query: 407 ALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKC-------------------------- 440
L ++ H +L G + L +++D Y+KC
Sbjct: 194 QLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLIS 253
Query: 441 -----GNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVT 495
G+M AE +F E++ V + +IA Y G +A+ LF +M+ G+KP+ T
Sbjct: 254 GYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFT 313
Query: 496 FVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSI 555
F + L A S+ G++ M + P + +ID+Y ++ LE + +
Sbjct: 314 FSSCLCASASIASLRHGKEIHGYMIRT-NVRPNAIVISSLIDMYSKSGSLEASERVFRIC 372
Query: 556 PTEEDAVILGSFLN 569
+ D V + ++
Sbjct: 373 DDKHDCVFWNTMIS 386
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 134/258 (51%), Gaps = 13/258 (5%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H Q + AG + + +I Y+K + +++ FDEM +++ W T+IS K D+
Sbjct: 202 HGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDM 261
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+ A LF P K+ V++ +++ GY+ +G AL LF +M + ++ ++FT +S L
Sbjct: 262 EAAEKLFCEMPEKNPVSWTALIAGYVR-QGSGNRALDLFRKMIALG--VKPEQFTFSSCL 318
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ ++ G+++H +M++T+ + +SSLIDMYSK E + RVF C ++ +
Sbjct: 319 CASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDC 378
Query: 193 ISKNAMVAACCREGEMEMALK------TFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
+ N M++A + G AL+ F QP V +++ +G EEGL+
Sbjct: 379 VFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLV---VILNACSHSGLVEEGLRW 435
Query: 247 FVRMG-ENGVRWNEHTFA 263
F M ++G+ ++ +A
Sbjct: 436 FESMTVQHGIVPDQEHYA 453
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 319 bits (818), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 214/723 (29%), Positives = 351/723 (48%), Gaps = 104/723 (14%)
Query: 17 IKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQAR 76
IK G T +N ++ + + +RK++DEMP +N S NT+IS +K+ D+ AR
Sbjct: 40 IKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSAR 99
Query: 77 SLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCV 136
LFD+ P + +VT+ ++L G+ + +A KLF +M + D T T+ L C
Sbjct: 100 DLFDAMPDRTVVTW-TILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCN 158
Query: 137 KLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKN 196
+ Q+HAF VK D + F L N
Sbjct: 159 DAVPQNAVGQVHAFAVKLGFDTNPF------------------------------LTVSN 188
Query: 197 AMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVR 256
++ + C +++A F PE D+V++NTLI+GY ++G E + LF++M ++G +
Sbjct: 189 VLLKSYCEVRRLDLACVLFEEIPE-KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQ 247
Query: 257 WNEHTFASALSACCGLRNVKCAKEI-------------------------HSWVLKNGLI 291
++ TF+ L A GL + +++ H VL+ ++
Sbjct: 248 PSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRML 307
Query: 292 SN-----PFVSSGIV-DVYCKCE----NMNYAESMLLLKGVRNSFSISSMI--------- 332
+ FVS +V Y + + ++++ M + R +F ++M+
Sbjct: 308 FDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSL 367
Query: 333 -VGYSLQ--------------GN-----------MEEARRHFDSLTEKNVVVWTALFSGY 366
+G L GN EEA F SL ++ V WTAL SGY
Sbjct: 368 QMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGY 427
Query: 367 VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMD 426
V+ A L ++ + + D +L A A A+L GK++HA+I+R G +
Sbjct: 428 VQKGLHGAGLKLFTK-MRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLEN 486
Query: 427 KKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE 486
S LVDMY+KCG++ A +F+ +R+ V +N +I+ +A +G E AI F +M+E
Sbjct: 487 VFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIE 546
Query: 487 KGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLE 546
G++PD+V+ + +L+A HCG VE G +YF +M+ Y I+P+ HYACM+DL GR +
Sbjct: 547 SGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFA 606
Query: 547 KAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG-NNKARYVQLANVY 605
+A + M +P E D ++ S LN CR+++N LA A EKL +E + A YV ++N+Y
Sbjct: 607 EAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIY 666
Query: 606 AAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFT 665
AA G W ++ ++K MR + SWV V H+IH+F+ D +HP + I + T
Sbjct: 667 AAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELT 726
Query: 666 GEL 668
E+
Sbjct: 727 AEI 729
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 130/504 (25%), Positives = 219/504 (43%), Gaps = 109/504 (21%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H ++ G + NQ++ YSKH+ + E+R LFDEMPE + S+N +IS+
Sbjct: 273 HALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISS------- 325
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
Y A+ YEA +L F EMQ R F + L
Sbjct: 326 ------------------------YSQADQYEA-SLHFFREMQCMGFDRR--NFPFATML 358
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
++ L ++ GRQLH + + D+ +SL+DMY+KC +EEA +F+ +
Sbjct: 359 SIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTT- 417
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
VSW LISGYVQ G GLKLF +M
Sbjct: 418 --------------------------------VSWTALISGYVQKGLHGAGLKLFTKMRG 445
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
+ +R ++ TFA+ L A ++ K++H++++++G + N F SG+VD+Y KC
Sbjct: 446 SNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKC----- 500
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G++++A + F+ + ++N V W AL S + +
Sbjct: 501 --------------------------GSIKDAVQVFEEMPDRNAVSWNALISAHADNGDG 534
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE-IHAYILRMGVQMDKKLIS 431
EA ++ + + G+ D++ ++ +L AC+ + G E A G+ KK +
Sbjct: 535 EAAIGAFAKMI-ESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYA 593
Query: 432 TLVDMYSKCGNMTYAEIIFQNF-IERDLVLY-NVMIACYAHHGH---EEKAILLFEEMLE 486
++D+ + G AE + E D +++ +V+ AC H E A LF +E
Sbjct: 594 CMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFS--ME 651
Query: 487 KGIKPDAVTFVAILSAFRHCGSVE 510
K DA +V++ + + G E
Sbjct: 652 K--LRDAAAYVSMSNIYAAAGEWE 673
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 315 bits (808), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 199/645 (30%), Positives = 334/645 (51%), Gaps = 88/645 (13%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLV 88
N ++ Y + + R++RKLFDEMP+RN+ SWN ++S +K+ ++ +AR +FD P +++V
Sbjct: 52 NSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVV 111
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLH 148
++ +++ GY++ G A LF +M ++ V+ T+ L
Sbjct: 112 SWTALVKGYVH-NGKVDVAESLFWKMPEKNK--------VSWTVMLI------------- 149
Query: 149 AFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEM 208
GF ID +AC+++E ++ N I++ +M+ C+EG +
Sbjct: 150 -----------GFLQDGRID---------DACKLYEMIPDKDN-IARTSMIHGLCKEGRV 188
Query: 209 EMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSA 268
+ A + F E ++W T+++GY QN ++ K+F M E E ++ S L
Sbjct: 189 DEAREIFDEMSE-RSVITWTTMVTGYGQNNRVDDARKIFDVMPEK----TEVSWTSMLMG 243
Query: 269 CCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSI 328
++NG I + AE + + V+ +
Sbjct: 244 ----------------YVQNGRIED-------------------AEELFEVMPVKPVIAC 268
Query: 329 SSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK-AQNCEALFDLLSEFVTKEG 387
++MI G +G + +ARR FDS+ E+N W + + + EAL DL + K+G
Sbjct: 269 NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEAL-DLFI-LMQKQG 326
Query: 388 VVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAE 447
V L+ +L CA A+LH GK++HA ++R +D + S L+ MY KCG + ++
Sbjct: 327 VRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSK 386
Query: 448 IIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM-LEKGIKPDAVTFVAILSAFRHC 506
+IF F +D++++N +I+ YA HG E+A+ +F EM L KP+ VTFVA LSA +
Sbjct: 387 LIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYA 446
Query: 507 GSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGS 566
G VE G K + SM + + + P T HYACM+D+ GRA + +A+E + S+ E DA + GS
Sbjct: 447 GMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGS 506
Query: 567 FLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKG 626
L CR + ++A +KL+ +E N Y+ L+N+YA++G WA++ +RK M+
Sbjct: 507 LLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLV 566
Query: 627 NRFAGCSWVYVEHEIHIFTVGDV-SHPKTNAIYSVLAIFTGELYE 670
+ GCSW VE+++H FT G + SHP+ +I +L G L E
Sbjct: 567 RKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLRE 611
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 115/478 (24%), Positives = 207/478 (43%), Gaps = 76/478 (15%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
I+ N L+ Y K+ + E+RK+FD MPERNV SW ++ + + + A SLF P K
Sbjct: 80 ISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK 139
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR 145
+ V++ ML G++ +G DA KL+ + D R TS ++ K V R
Sbjct: 140 NKVSWTVMLIGFLQ-DGRIDDACKLYEMIPDKDNIAR------TSMIHGLCKEGRVDEAR 192
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN-------------- 191
++ M ++ S ++++ Y + ++A ++F+ E+
Sbjct: 193 EIFDEM----SERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNG 248
Query: 192 ----------------LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYV 235
+I+ NAM++ ++GE+ A + F E NDA SW T+I +
Sbjct: 249 RIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDA-SWQTVIKIHE 307
Query: 236 QNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPF 295
+NG E L LF+ M + GVR T S LS C L ++ K++H+ +++ + +
Sbjct: 308 RNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVY 367
Query: 296 VSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKN 355
V+S ++ +Y KC G + +++ FD K+
Sbjct: 368 VASVLMTMYIKC-------------------------------GELVKSKLIFDRFPSKD 396
Query: 356 VVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIH 415
+++W ++ SGY E + E + + V L AC+ + G +I+
Sbjct: 397 IIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIY 456
Query: 416 AYILRM-GVQMDKKLISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMI-ACYAH 470
+ + GV+ + +VDM + G A E+I +E D ++ ++ AC H
Sbjct: 457 ESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTH 514
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 155/373 (41%), Gaps = 99/373 (26%)
Query: 24 TTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP 83
+ IT ++ Y ++N + ++RK+FD MPE+ SW +++ +++ ++ A LF+ P
Sbjct: 202 SVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMP 261
Query: 84 HKDLVTYNSMLCGYINA------------------------------EGYEADALKLFIE 113
K ++ N+M+ G G+E +AL LFI
Sbjct: 262 VKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFIL 321
Query: 114 MQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKC 173
MQ + +R T+ S L++C L ++ G+Q+HA +V+ D + S L+ MY KC
Sbjct: 322 MQK--QGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKC 379
Query: 174 RCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISG 233
GE+ + F R P D + WN++ISG
Sbjct: 380 --------------------------------GELVKSKLIFDRFPS-KDIIMWNSIISG 406
Query: 234 YVQNGDAEEGLKLFVRMGENG-VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
Y +G EE LK+F M +G + NE TF + LSAC
Sbjct: 407 YASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACS---------------------- 444
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRN-SFSISSMIVGYSLQGNMEEARRHFDSL 351
+G+V+ E + ESM + GV+ + + M+ G EA DS+
Sbjct: 445 ----YAGMVE-----EGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSM 495
Query: 352 T-EKNVVVWTALF 363
T E + VW +L
Sbjct: 496 TVEPDAAVWGSLL 508
Score = 76.3 bits (186), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 86/409 (21%), Positives = 176/409 (43%), Gaps = 55/409 (13%)
Query: 194 SKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE- 252
+ N + R G++ A K F + SWN++++GY N + KLF M +
Sbjct: 19 TANVRITHLSRIGKIHEARKLF-DSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDR 77
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS-----NPFVSSGIVDV---- 303
N + WN +S + A+++ + + ++S +V +G VDV
Sbjct: 78 NIISWN-----GLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESL 132
Query: 304 YCKCENMNYAESMLLLKGV------------------RNSFSISSMIVGYSLQGNMEEAR 345
+ K N ++L G +++ + +SMI G +G ++EAR
Sbjct: 133 FWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAR 192
Query: 346 RHFDSLTEKNVVVWTALFSGYV---KAQNCEALFDLLSEFVTKEGVVTDALILVILLGAC 402
FD ++E++V+ WT + +GY + + +FD++ E T+ +L+G
Sbjct: 193 EIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPE-------KTEVSWTSMLMGYV 245
Query: 403 ALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYN 462
+ +E+ + V +IS L + G + A +F + ER+ +
Sbjct: 246 Q-NGRIEDAEELFEVMPVKPVIACNAMISGL----GQKGEIAKARRVFDSMKERNDASWQ 300
Query: 463 VMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTAD 522
+I + +G E +A+ LF M ++G++P T ++ILS S+ G++ +
Sbjct: 301 TVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLV-- 358
Query: 523 YKISPETDHY--ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLN 569
+ + D Y + ++ +Y + +L K+ P+ +D ++ S ++
Sbjct: 359 -RCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPS-KDIIMWNSIIS 405
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 82/206 (39%), Gaps = 46/206 (22%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H Q ++ + + L+ +Y K L +S+ +FD P +++ WN+IIS
Sbjct: 354 HAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIIS-------- 405
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
GY + G +ALK+F EM + + +E T +TL
Sbjct: 406 -----------------------GYA-SHGLGEEALKVFCEMPLSGS-TKPNEVTFVATL 440
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS-------LIDMYSKCRCYEEACRVFEG 185
+ C V G +++ M S F V ++DM + + EA + +
Sbjct: 441 SACSYAGMVEEGLKIYESM------ESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDS 494
Query: 186 CTEEVNLISKNAMVAACCREGEMEMA 211
T E + +++ AC ++++A
Sbjct: 495 MTVEPDAAVWGSLLGACRTHSQLDVA 520
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 314 bits (804), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 176/601 (29%), Positives = 317/601 (52%), Gaps = 44/601 (7%)
Query: 72 LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEAD-ALKLFIEMQSADEHIRMDEFTVTS 130
L+ AR +FD P + +N+++ Y A G + ++ F++M S + +++T
Sbjct: 80 LEYARKVFDEIPKPNSFAWNTLIRAY--ASGPDPVLSIWAFLDMVS-ESQCYPNKYTFPF 136
Query: 131 TLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEV 190
+ ++ ++ G+ LH VK++ + F +SLI Y C + AC+VF E+
Sbjct: 137 LIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEK- 195
Query: 191 NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
D VSWN++I+G+VQ G ++ L+LF +M
Sbjct: 196 --------------------------------DVVSWNSMINGFVQKGSPDKALELFKKM 223
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
V+ + T LSAC +RN++ +++ S++ +N + N +++ ++D+Y KC ++
Sbjct: 224 ESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSI 283
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
A+ + +++ + ++M+ GY++ + E AR +S+ +K++V W AL S Y +
Sbjct: 284 EDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNG 343
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
+ E ++ + + + LV L ACA AL G+ IH+YI + G++M+ +
Sbjct: 344 KPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVT 403
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
S L+ MYSKCG++ + +F + +RD+ +++ MI A HG +A+ +F +M E +K
Sbjct: 404 SALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVK 463
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
P+ VTF + A H G V+ E F+ M ++Y I PE HYAC++D+ GR+ LEKA++
Sbjct: 464 PNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVK 523
Query: 551 FMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGN 610
F++++P + G+ L C+++ N LA A +LL LE N +V L+N+YA G
Sbjct: 524 FIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGK 583
Query: 611 WAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGELYE 670
W + +RK MR + GCS + ++ IH F GD +HP + +Y G+L+E
Sbjct: 584 WENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVY-------GKLHE 636
Query: 671 I 671
+
Sbjct: 637 V 637
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 180/366 (49%), Gaps = 43/366 (11%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTI 62
SL+L ++L H A+K+ + N LIH Y L + K+F + E++V SWN++
Sbjct: 146 SLSLGQSL--HGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSM 203
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
I+ ++ SP K AL+LF +M+S D ++
Sbjct: 204 INGFVQK-----------GSPDK---------------------ALELFKKMESED--VK 229
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
T+ L+ C K+ N+ FGRQ+ +++ + + + ++++DMY+KC E+A R+
Sbjct: 230 ASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRL 289
Query: 183 FEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEE 242
F+ E+ N ++ M+ + E A + P+ D V+WN LIS Y QNG E
Sbjct: 290 FDAMEEKDN-VTWTTMLDGYAISEDYEAAREVLNSMPQ-KDIVAWNALISAYEQNGKPNE 347
Query: 243 GLKLFVRMG-ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
L +F + + ++ N+ T S LSAC + ++ + IHS++ K+G+ N V+S ++
Sbjct: 348 ALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALI 407
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNV----V 357
+Y KC ++ + + R+ F S+MI G ++ G EA F + E NV V
Sbjct: 408 HMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGV 467
Query: 358 VWTALF 363
+T +F
Sbjct: 468 TFTNVF 473
Score = 106 bits (264), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 153/335 (45%), Gaps = 38/335 (11%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
+R+L + +++ + + LT N ++ +Y+K + ++++LFD M E++ +W
Sbjct: 245 IRNLEFGRQVCSYIEENRVNVNLTL--ANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWT 302
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
T++ S D + AR + +S P KD+V +N+++ Y G +AL +F E+Q ++
Sbjct: 303 TMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAY-EQNGKPNEALIVFHELQ-LQKN 360
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
+++++ T+ STL+ C ++ + GR +H+++ K + S+LI MYSKC E++
Sbjct: 361 MKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSR 420
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
VF E D W+ +I G +G
Sbjct: 421 EVFNSV---------------------------------EKRDVFVWSAMIGGLAMHGCG 447
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKN-GLISNPFVSSG 299
E + +F +M E V+ N TF + AC V A+ + + N G++ +
Sbjct: 448 NEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYAC 507
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVG 334
IVDV + + A + + S S+ ++G
Sbjct: 508 IVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLG 542
Score = 89.7 bits (221), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 157/395 (39%), Gaps = 86/395 (21%)
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
S + C LR +K + H +++ G S+P Y+ S L
Sbjct: 35 SLIERCVSLRQLK---QTHGHMIRTGTFSDP-----------------YSASKLFAMAAL 74
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFV 383
+SF+ ++E AR+ FD + + N W L Y + + V
Sbjct: 75 SSFA------------SLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMV 122
Query: 384 TKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNM 443
++ + L+ A A ++L G+ +H ++ V D + ++L+ Y CG++
Sbjct: 123 SESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDL 182
Query: 444 TYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA- 502
A +F E+D+V +N MI + G +KA+ LF++M + +K VT V +LSA
Sbjct: 183 DSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSAC 242
Query: 503 ----------------------------------FRHCGSVEMGEKYFNSMTADYKISPE 528
+ CGS+E ++ F++M ++
Sbjct: 243 AKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVT-- 300
Query: 529 TDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKL- 587
+ M+D Y + E A E + S+P ++D V + ++ N G+ E L
Sbjct: 301 ---WTTMLDGYAISEDYEAAREVLNSMP-QKDIVAWNALISAYEQN------GKPNEALI 350
Query: 588 ----LRLEGNNKARYVQLANVYA--AEGNWAEMGR 616
L+L+ N K + L + + A+ E+GR
Sbjct: 351 VFHELQLQKNMKLNQITLVSTLSACAQVGALELGR 385
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 314 bits (804), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 186/610 (30%), Positives = 308/610 (50%), Gaps = 69/610 (11%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N+++S K A LF D VT+N M+ GY+ + G ++L F EM S+
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQS-GLMEESLTFFYEMISSG- 335
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
+ D T +S L K N+ + +Q+H ++++ S F S+LID Y KCR A
Sbjct: 336 -VLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMA 394
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGD 239
+F C D V + +ISGY+ NG
Sbjct: 395 QNIFSQCNSV---------------------------------DVVVFTAMISGYLHNGL 421
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
+ L++F + + + NE T S L L +K +E+H +++K G + +
Sbjct: 422 YIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCA 481
Query: 300 IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW 359
++D+Y KC MN A + F+ L+++++V W
Sbjct: 482 VIDMYAKCGRMNLAYEI-------------------------------FERLSKRDIVSW 510
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
++ + ++ N A D+ + + G+ D + + L ACA + GK IH +++
Sbjct: 511 NSMITRCAQSDNPSAAIDIFRQ-MGVSGICYDCVSISAALSACANLPSESFGKAIHGFMI 569
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
+ + D STL+DMY+KCGN+ A +F+ E+++V +N +IA +HG + ++
Sbjct: 570 KHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLC 629
Query: 480 LFEEMLEK-GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDL 538
LF EM+EK GI+PD +TF+ I+S+ H G V+ G ++F SMT DY I P+ +HYAC++DL
Sbjct: 630 LFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDL 689
Query: 539 YGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARY 598
+GRA +L +A E +KS+P DA + G+ L CRL++N ELA A KL+ L+ +N Y
Sbjct: 690 FGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYY 749
Query: 599 VQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
V ++N +A W + ++R M+ + + G SW+ + H+F GDV+HP+++ IY
Sbjct: 750 VLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIY 809
Query: 659 SVLAIFTGEL 668
S+L GEL
Sbjct: 810 SLLNSLLGEL 819
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 139/520 (26%), Positives = 235/520 (45%), Gaps = 76/520 (14%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
N F +++I A ++ + LFD KD V +N ML GY ++ +K F M
Sbjct: 172 NEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDS-VIKGFSVM 230
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
+ + I + T L++C L + G QLH +V + D G +SL+ MYSKC
Sbjct: 231 RM--DQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCG 288
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
+++A ++F R D V+WN +ISGY
Sbjct: 289 RFDDASKLF---------------------------------RMMSRADTVTWNCMISGY 315
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
VQ+G EE L F M +GV + TF+S L + N++ K+IH +++++ + +
Sbjct: 316 VQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDI 375
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
F++S ++D Y KC ++ A+++ F
Sbjct: 376 FLTSALIDAYFKCRGVSMAQNI-------------------------------FSQCNSV 404
Query: 355 NVVVWTALFSGYVKAQNCEALF-DLLSEF--VTKEGVVTDALILVILLGACALQAALHPG 411
+VVV+TA+ SGY+ L+ D L F + K + + + LV +L + AL G
Sbjct: 405 DVVVFTAMISGYLH----NGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLG 460
Query: 412 KEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
+E+H +I++ G + ++DMY+KCG M A IF+ +RD+V +N MI A
Sbjct: 461 RELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQS 520
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH 531
+ AI +F +M GI D V+ A LSA + S G K + + ++ +
Sbjct: 521 DNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFG-KAIHGFMIKHSLASDVYS 579
Query: 532 YACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVC 571
+ +ID+Y + L+ A+ K++ E++ V S + C
Sbjct: 580 ESTLIDMYAKCGNLKAAMNVFKTM-KEKNIVSWNSIIAAC 618
Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 157/361 (43%), Gaps = 67/361 (18%)
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
G+Q+HAF++ S + ++ MY+ C + + ++F
Sbjct: 54 GKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMF-------------------- 93
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
+ L+ +P WN++IS +V+NG + L + +M GV + TF
Sbjct: 94 ----YRLDLRRSSIRP-------WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFP 142
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
+ AC L+N K + V G+ N FV+S ++ Y +
Sbjct: 143 CLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLE----------------- 185
Query: 324 NSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEF- 382
G ++ + FD + +K+ V+W + +GY K C AL ++ F
Sbjct: 186 --------------YGKIDVPSKLFDRVLQKDCVIWNVMLNGYAK---CGALDSVIKGFS 228
Query: 383 -VTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
+ + + +A+ +L CA + + G ++H ++ GV + + ++L+ MYSKCG
Sbjct: 229 VMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCG 288
Query: 442 NMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
A +F+ D V +N MI+ Y G E+++ F EM+ G+ PDA+TF ++L
Sbjct: 289 RFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLP 348
Query: 502 A 502
+
Sbjct: 349 S 349
Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 111/481 (23%), Positives = 208/481 (43%), Gaps = 84/481 (17%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKL----FDEMPERNVFSWNT 61
++E+L + I +G+ IT + L+ SK L +++ ++F +
Sbjct: 321 MEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSA 380
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I A K + A+++F D+V + +M+ GY++ G D+L++F + I
Sbjct: 381 LIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLH-NGLYIDSLEMFRWLVKV--KI 437
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+E T+ S L + LL + GR+LH F++K D ++IDMY+KC
Sbjct: 438 SPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKC-------- 489
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
G M +A + F R + D VSWN++I+ Q+ +
Sbjct: 490 ------------------------GRMNLAYEIFERLSK-RDIVSWNSMITRCAQSDNPS 524
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
+ +F +MG +G+ ++ + ++ALSAC L + K IH +++K+ L S+ + S ++
Sbjct: 525 AAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLI 584
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D+Y KC GN++ A F ++ EKN+V W +
Sbjct: 585 DMYAKC-------------------------------GNLKAAMNVFKTMKEKNIVSWNS 613
Query: 362 LFS-----GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPG-KEIH 415
+ + G +K C L E V K G+ D + + ++ +C + G +
Sbjct: 614 IIAACGNHGKLKDSLC-----LFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFR 668
Query: 416 AYILRMGVQMDKKLISTLVDMYSKCGNMT--YAEIIFQNFIERDLVLYNVMIACYAHHGH 473
+ G+Q ++ + +VD++ + G +T Y + F V ++ AC H
Sbjct: 669 SMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNV 728
Query: 474 E 474
E
Sbjct: 729 E 729
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/362 (19%), Positives = 130/362 (35%), Gaps = 83/362 (22%)
Query: 252 ENGVRWNEHTFASALS----ACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
N R+ E T LS AC ++ K++H++++ N + + + I+ +Y C
Sbjct: 24 RNSSRFLEETIPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMC 83
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
+ + M +R S ++ W ++ S +V
Sbjct: 84 GSFSDCGKMFYRLDLRRS-----------------------------SIRPWNSIISSFV 114
Query: 368 KAQNCEALFDLLSEFVTKE---GVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
+ L + F K GV D L+ AC + + +G+
Sbjct: 115 R----NGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMD 170
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
++ + S+L+ Y + G + +F +++D V++NVM+ YA G + I F M
Sbjct: 171 CNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVM 230
Query: 485 LEKGIKPDAVTFVAILSA-----------------------------------FRHCGSV 509
I P+AVTF +LS + CG
Sbjct: 231 RMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRF 290
Query: 510 EMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF---MKSIPTEEDAVILGS 566
+ K F M+ +T + CMI Y ++ +E+++ F M S DA+ S
Sbjct: 291 DDASKLFRMMS-----RADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSS 345
Query: 567 FL 568
L
Sbjct: 346 LL 347
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 309 bits (791), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 199/647 (30%), Positives = 318/647 (49%), Gaps = 101/647 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A+K GL L +N LI++Y K LR+ F +
Sbjct: 338 HCMALKLGLDLMLTVSNSLINMYCK---LRK-------------FGF------------- 368
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
AR++FD+ +DL+++NS++ G I G E +A+ LF+++ ++ D++T+TS L
Sbjct: 369 --ARTVFDNMSERDLISWNSVIAG-IAQNGLEVEAVCLFMQLLRCG--LKPDQYTMTSVL 423
Query: 133 NLCVKLL-NVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
L + +Q+H +K +N + F ++LID YS+ RC +EA +FE
Sbjct: 424 KAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER------ 477
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
F D V+WN +++GY Q+ D + LKLF M
Sbjct: 478 ---------------------HNF-------DLVAWNAMMAGYTQSHDGHKTLKLFALMH 509
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
+ G R ++ T A+ C L + K++H++ +K+G + +VSSGI+D+Y KC
Sbjct: 510 KQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKC---- 565
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQN 371
G+M A+ FDS+ + V WT + SG ++
Sbjct: 566 ---------------------------GDMSAAQFAFDSIPVPDDVAWTTMISGCIENGE 598
Query: 372 CEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLIS 431
E F + S+ + GV+ D + L A + AL G++IHA L++ D + +
Sbjct: 599 EERAFHVFSQ-MRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGT 657
Query: 432 TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKP 491
+LVDMY+KCG++ A +F+ ++ +N M+ A HG ++ + LF++M GIKP
Sbjct: 658 SLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKP 717
Query: 492 DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF 551
D VTF+ +LSA H G V K+ SM DY I PE +HY+C+ D GRA +++A
Sbjct: 718 DKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENL 777
Query: 552 MKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNW 611
++S+ E A + + L CR+ + E KLL LE + + YV L+N+YAA W
Sbjct: 778 IESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKW 837
Query: 612 AEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIY 658
EM R M+G K + G SW+ V+++IHIF V D S+ +T IY
Sbjct: 838 DEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIY 884
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 139/567 (24%), Positives = 241/567 (42%), Gaps = 105/567 (18%)
Query: 48 FDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINA-----EG 102
F+E PER F N +IS K L AR +FD P +DLV++NS+L Y + E
Sbjct: 68 FEENPER--FLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVEN 125
Query: 103 YEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFA 162
+ L I Q RM T++ L LC+ V H + K D F
Sbjct: 126 IQQAFLLFRILRQDVVYTSRM---TLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFV 182
Query: 163 VSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMA--LKTFWRQPE 220
+L+++Y K +E +FE +++ N M+ A G E A L + +
Sbjct: 183 AGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSG 241
Query: 221 L-----------------------------NDAVSWNTLI------SGYVQNGDAEEGLK 245
L NDA S + +I S Y+ +G LK
Sbjct: 242 LNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLK 301
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
F M E+ V ++ TF L+ + ++ +++H LK GL VS+ ++++YC
Sbjct: 302 CFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYC 361
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
K +A ++ FD+++E++++ W ++ +G
Sbjct: 362 KLRKFGFARTV-------------------------------FDNMSERDLISWNSVIAG 390
Query: 366 YVKAQN---CEALFDLLSEFVTKEGVVTDALILV-ILLGACALQAALHPGKEIHAYILRM 421
AQN EA+ + + + G+ D + +L A +L L K++H + +++
Sbjct: 391 I--AQNGLEVEAVCLFMQ--LLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKI 446
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQ--NFIERDLVLYNVMIACY--AHHGHEEKA 477
D + + L+D YS+ M AEI+F+ NF DLV +N M+A Y +H GH K
Sbjct: 447 NNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF---DLVAWNAMMAGYTQSHDGH--KT 501
Query: 478 ILLFEEMLEKGIKPDAVTFVAILSAFRHCG---SVEMGEK-YFNSMTADYKISPETDHYA 533
+ LF M ++G + D T + F+ CG ++ G++ + ++ + Y + +
Sbjct: 502 LKLFALMHKQGERSDDFTLATV---FKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS--S 556
Query: 534 CMIDLYGRANQLEKAIEFMKSIPTEED 560
++D+Y + + A SIP +D
Sbjct: 557 GILDMYVKCGDMSAAQFAFDSIPVPDD 583
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 169/403 (41%), Gaps = 77/403 (19%)
Query: 143 FGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAAC 202
G+ HA ++ + F +++LI MYSKC
Sbjct: 57 LGKCTHARILTFEENPERFLINNLISMYSKC----------------------------- 87
Query: 203 CREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA-----EEGLKLFVRMGENGVRW 257
G + A + F + P+ D VSWN++++ Y Q+ + ++ LF + ++ V
Sbjct: 88 ---GSLTYARRVFDKMPD-RDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYT 143
Query: 258 NEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC---------- 307
+ T + L C V ++ H + K GL + FV+ +V++Y K
Sbjct: 144 SRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLF 203
Query: 308 ENMNYAESML---LLKGV------RNSFSISSMIVGYSLQGNMEEAR------------- 345
E M Y + +L +LK + +SS L N R
Sbjct: 204 EEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAG 263
Query: 346 --RHF----DSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILL 399
+ F D+ + ++ S Y+ + AL ++ V + V D + +++L
Sbjct: 264 QVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESD-VECDQVTFILML 322
Query: 400 GACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLV 459
+L G+++H L++G+ + + ++L++MY K +A +F N ERDL+
Sbjct: 323 ATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLI 382
Query: 460 LYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
+N +IA A +G E +A+ LF ++L G+KPD T ++L A
Sbjct: 383 SWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKA 425
Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 19/135 (14%)
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
GK HA IL ++ LI+ L+ MYSKCG++TYA +F +RDLV +N ++A YA
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 471 HG-----HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKI 525
+ ++A LLF + + + +T +L H G V E +
Sbjct: 118 SSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHG-------- 169
Query: 526 SPETDHYACMIDLYG 540
YAC I L G
Sbjct: 170 ------YACKIGLDG 178
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 307 bits (786), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 184/601 (30%), Positives = 296/601 (49%), Gaps = 67/601 (11%)
Query: 57 FSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQS 116
F +I A D+ AR +FD P + +N+++ GY ++ DAL ++ MQ
Sbjct: 54 FLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQ-DALLMYSNMQL 112
Query: 117 ADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCY 176
A + D FT L C L ++ GR +HA + + DA F + LI +Y+KCR
Sbjct: 113 A--RVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRL 170
Query: 177 EEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQ 236
A VFEG + + +T VSW ++S Y Q
Sbjct: 171 GSARTVFEG----------------------LPLPERTI---------VSWTAIVSAYAQ 199
Query: 237 NGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFV 296
NG+ E L++F +M + V+ + S L+A L+++K + IH+ V+K GL P +
Sbjct: 200 NGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDL 259
Query: 297 SSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNV 356
+ +Y KC G + A+ FD + N+
Sbjct: 260 LISLNTMYAKC-------------------------------GQVATAKILFDKMKSPNL 288
Query: 357 VVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHA 416
++W A+ SGY K D+ E + K+ V D + + + ACA +L + ++
Sbjct: 289 ILWNAMISGYAKNGYAREAIDMFHEMINKD-VRPDTISITSAISACAQVGSLEQARSMYE 347
Query: 417 YILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
Y+ R + D + S L+DM++KCG++ A ++F ++RD+V+++ MI Y HG +
Sbjct: 348 YVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRARE 407
Query: 477 AILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMI 536
AI L+ M G+ P+ VTF+ +L A H G V G +FN M AD+KI+P+ HYAC+I
Sbjct: 408 AISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHKINPQQQHYACVI 466
Query: 537 DLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKA 596
DL GRA L++A E +K +P + + G+ L+ C+ +R+ EL A ++L ++ +N
Sbjct: 467 DLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTG 526
Query: 597 RYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNA 656
YVQL+N+YAA W + +R +M+ N+ GCSWV V + F VGD SHP+
Sbjct: 527 HYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEE 586
Query: 657 I 657
I
Sbjct: 587 I 587
Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 128/264 (48%), Gaps = 6/264 (2%)
Query: 288 NGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNS-FSISSMIVGYSLQGNMEEARR 346
+G+ S+ F +S ++D + + LL+ G++ S F I+ +I S G++ AR+
Sbjct: 16 SGIHSDSFYAS-LIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQ 74
Query: 347 HFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQA 406
FD L + W A+ GY + + + + S V D+ LL AC+ +
Sbjct: 75 VFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLAR-VSPDSFTFPHLLKACSGLS 133
Query: 407 ALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQN--FIERDLVLYNVM 464
L G+ +HA + R+G D + + L+ +Y+KC + A +F+ ER +V + +
Sbjct: 134 HLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAI 193
Query: 465 IACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYK 524
++ YA +G +A+ +F +M + +KPD V V++L+AF ++ G + ++
Sbjct: 194 VSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQG-RSIHASVVKMG 252
Query: 525 ISPETDHYACMIDLYGRANQLEKA 548
+ E D + +Y + Q+ A
Sbjct: 253 LEIEPDLLISLNTMYAKCGQVATA 276
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 128/337 (37%), Gaps = 108/337 (32%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFD--EMPERNVFSWNTI 62
+L+ H Q + G N LI +Y+K L +R +F+ +PER + SW I
Sbjct: 134 HLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAI 193
Query: 63 ISACIKS-----------------------------------HDLKQARS---------- 77
+SA ++ DLKQ RS
Sbjct: 194 VSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGL 253
Query: 78 -------------------------LFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
LFD +L+ +N+M+ GY GY +A+ +F
Sbjct: 254 EIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAK-NGYAREAIDMFH 312
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
EM + D +R D ++TS ++ C ++ ++ R ++ ++ ++ F S+LIDM++K
Sbjct: 313 EMINKD--VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAK 370
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C E A VF+ +T R D V W+ +I
Sbjct: 371 CGSVEGARLVFD----------------------------RTLDR-----DVVVWSAMIV 397
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
GY +G A E + L+ M GV N+ TF L AC
Sbjct: 398 GYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMAC 434
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 90/184 (48%), Gaps = 13/184 (7%)
Query: 384 TKEGVVTDALILVILLGACALQAALHPG--KEIHAYILRMGVQMDKKLISTLVDMYSKCG 441
T G+ +D+ A + +A H K+IHA +L +G+Q LI+ L+ S G
Sbjct: 14 TNSGIHSDSFY------ASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFG 67
Query: 442 NMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILS 501
++T+A +F + + +N +I Y+ + H + A+L++ M + PD+ TF +L
Sbjct: 68 DITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLK 127
Query: 502 AFRHCGSVEMGEKYFNSMTADYKISPETDHYA--CMIDLYGRANQLEKAIEFMKSIPTEE 559
A ++MG ++ ++ +++ + D + +I LY + +L A + +P E
Sbjct: 128 ACSGLSHLQMG-RFVHAQV--FRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPE 184
Query: 560 DAVI 563
++
Sbjct: 185 RTIV 188
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 305 bits (781), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 190/612 (31%), Positives = 313/612 (51%), Gaps = 46/612 (7%)
Query: 57 FSWNTIISACIKS---HDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIE 113
++ + +I CI S L A S+F + +L+ +N+M G+ + ALKL++
Sbjct: 66 YALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSD-PVSALKLYVC 124
Query: 114 MQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKC 173
M S + + +T L C K G+Q+H ++K D + +SLI MY +
Sbjct: 125 MISLG--LLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQN 182
Query: 174 RCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISG 233
E+A +VF+ +++S A++ G +E A K F P + D VSWN +ISG
Sbjct: 183 GRLEDAHKVFDKSPHR-DVVSYTALIKGYASRGYIENAQKLFDEIP-VKDVVSWNAMISG 240
Query: 234 YVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISN 293
Y + G+ +E L+LF M + VR +E T + +SAC +++ +++H W+ +G SN
Sbjct: 241 YAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSN 300
Query: 294 PFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTE 353
+ + ++D+Y KC G +E A F+ L
Sbjct: 301 LKIVNALIDLYSKC-------------------------------GELETACGLFERLPY 329
Query: 354 KNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
K+V+ W L GY + L E + + G + + ++ +L ACA A+ G+
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEML-RSGETPNDVTMLSILPACAHLGAIDIGRW 388
Query: 414 IHAYILRM--GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHH 471
IH YI + GV L ++L+DMY+KCG++ A +F + + + L +N MI +A H
Sbjct: 389 IHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMH 448
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDH 531
G + + LF M + GI+PD +TFV +LSA H G +++G F +MT DYK++P+ +H
Sbjct: 449 GRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEH 508
Query: 532 YACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLE 591
Y CMIDL G + ++A E + + E D VI S L C+++ N EL E L+++E
Sbjct: 509 YGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIE 568
Query: 592 GNNKARYVQLANVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDV 649
N YV L+N+YA+ G W E+ + R + +GMK + GCS + ++ +H F +GD
Sbjct: 569 PENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMK--KVPGCSSIEIDSVVHEFIIGDK 626
Query: 650 SHPKTNAIYSVL 661
HP+ IY +L
Sbjct: 627 FHPRNREIYGML 638
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 165/623 (26%), Positives = 267/623 (42%), Gaps = 140/623 (22%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
+S KE H +K G L LI +Y ++ L ++ K+FD+ P R+V S+
Sbjct: 146 KSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTA 205
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I ++ A+ LFD P KD+V++N+M+ GY Y+ +AL+LF +M + +
Sbjct: 206 LIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYK-EALELFKDMMKTN--V 262
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFA-----VSSLIDMYSKCRCY 176
R DE T+ + ++ C + ++ GRQ+H ++ D GF V++LID+YSKC
Sbjct: 263 RPDESTMVTVVSACAQSGSIELGRQVHLWI-----DDHGFGSNLKIVNALIDLYSKCGEL 317
Query: 177 EEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQ 236
E AC +FE R P D +SWNTLI GY
Sbjct: 318 ETACGLFE--------------------------------RLP-YKDVISWNTLIGGYTH 344
Query: 237 NGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLK--NGLISNP 294
+E L LF M +G N+ T S L AC L + + IH ++ K G+ +
Sbjct: 345 MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNAS 404
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
+ + ++D+Y KC G++E A + F+S+ K
Sbjct: 405 SLRTSLIDMYAKC-------------------------------GDIEAAHQVFNSILHK 433
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
++ W A+ G+ +A FDL S + K G+ D + V LL AC+
Sbjct: 434 SLSSWNAMIFGFAMHGRADASFDLFSR-MRKIGIQPDDITFVGLLSACS----------- 481
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
H+ +L +G + + T+ Y + + Y MI H G
Sbjct: 482 HSGMLDLG----RHIFRTMTQDYKMTPKLEH---------------YGCMIDLLGHSG-- 520
Query: 475 EKAILLFE----EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD 530
LF+ + ++PD V + ++L A + G+VE+GE + ++ KI PE
Sbjct: 521 -----LFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLI---KIEPENP 572
Query: 531 -HYACMIDLY---GRANQLEKAIEF-----MKSIP----TEEDAVILGSFLNVCRLNRNA 577
Y + ++Y GR N++ K MK +P E D+V+ + RN
Sbjct: 573 GSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNR 632
Query: 578 ELAGEAEEKLLRLEGNNKARYVQ 600
E+ G EE + LE KA +V
Sbjct: 633 EIYGMLEEMEVLLE---KAGFVP 652
Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 145/331 (43%), Gaps = 64/331 (19%)
Query: 260 HTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLL 319
H S L C L++++ IH+ ++K GL N NYA S L
Sbjct: 34 HPSLSLLHNCKTLQSLRI---IHAQMIKIGL-----------------HNTNYALSKL-- 71
Query: 320 KGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLL 379
I I+ +G + A F ++ E N+++W +F G+ + + + L
Sbjct: 72 --------IEFCILSPHFEG-LPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLY 122
Query: 380 SEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSK 439
++ G++ ++ +L +CA A G++IH ++L++G +D + ++L+ MY +
Sbjct: 123 VCMISL-GLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQ 181
Query: 440 CGNMTYAEIIFQNFIERDLVLY-------------------------------NVMIACY 468
G + A +F RD+V Y N MI+ Y
Sbjct: 182 NGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGY 241
Query: 469 AHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE 528
A G+ ++A+ LF++M++ ++PD T V ++SA GS+E+G + + D+
Sbjct: 242 AETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ-VHLWIDDHGFGSN 300
Query: 529 TDHYACMIDLYGRANQLEKAIEFMKSIPTEE 559
+IDLY + +LE A + +P ++
Sbjct: 301 LKIVNALIDLYSKCGELETACGLFERLPYKD 331
>sp|Q9SJK9|PP189_ARATH Pentatricopeptide repeat-containing protein At2g36980,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E73 PE=2
SV=1
Length = 625
Score = 304 bits (778), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 199/618 (32%), Positives = 318/618 (51%), Gaps = 23/618 (3%)
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIR 122
I++ KS + AR +FD P D V +N+ML Y + G +A+ LF +++ +D +
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSY-SRLGLHQEAIALFTQLRFSDA--K 67
Query: 123 MDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRV 182
D+++ T+ L+ C L NV FGR++ + ++++ AS +SLIDMY KC A +V
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKV 127
Query: 183 FEG-CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
F C + N ++ +++ A + E AL F P+ A +WN +ISG+ G E
Sbjct: 128 FRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPK-RVAFAWNIMISGHAHCGKLE 186
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCG-LRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
L LF M E+ + + +TF+S ++AC NV + +H+ +LKNG S + +
Sbjct: 187 SCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSV 246
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
+ Y K + + A L V S +S+I G E+A F EKN+V WT
Sbjct: 247 LSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWT 306
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
+ +GY + + E E + K GV +D +L AC+ A L GK IH ++
Sbjct: 307 TMITGYGRNGDGEQALRFFVEMM-KSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIH 365
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
G Q + + LV++Y+KCG++ A+ F + +DLV +N M+ + HG ++A+ L
Sbjct: 366 CGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKL 425
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYG 540
++ M+ GIKPD VTF+ +L+ H G VE G F SM DY+I E DH CMID++G
Sbjct: 426 YDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFG 485
Query: 541 RANQLEKAIEFMKSIPTEEDAVILGS--------FLNVCRLNRNAELAGEAEEKLLRLEG 592
R L +A K + T +++ S L C + + EL E + L E
Sbjct: 486 RGGHLAEA----KDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEP 541
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQM--RGMKGNRFAGCSWVYVEHEIHIFTVGDVS 650
+ + +V L+N+Y + G W E +R++M RGMK + GCSW+ V +++ F VGD S
Sbjct: 542 SEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMK--KTPGCSWIEVGNQVSTFVVGDSS 599
Query: 651 HPKTNAIYSVLAIFTGEL 668
HP+ + L E+
Sbjct: 600 HPRLEELSETLNCLQHEM 617
Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 213/438 (48%), Gaps = 47/438 (10%)
Query: 17 IKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEM--PERNVFSWNTIISACIKSHDLKQ 74
I++G + N LI +Y K + + K+F +M RN +W +++ A + + +
Sbjct: 97 IRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEA 156
Query: 75 ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNL 134
A +F P + +N M+ G+ + E+ L LF EM ++ + D +T +S +N
Sbjct: 157 ALDVFVEMPKRVAFAWNIMISGHAHCGKLES-CLSLFKEMLESE--FKPDCYTFSSLMNA 213
Query: 135 C-VKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLI 193
C NV +GR +HA M+K ++ A +S++ Y+K ++A R E E + +
Sbjct: 214 CSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELES-IEVLTQV 272
Query: 194 SKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGEN 253
S N+++ AC + GE E AL+ F PE N V+W T+I+GY +NGD E+ L+ FV M ++
Sbjct: 273 SWNSIIDACMKIGETEKALEVFHLAPEKN-IVTWTTMITGYGRNGDGEQALRFFVEMMKS 331
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA 313
GV + + + L AC GL + K IH ++ G +V + +V++Y KC
Sbjct: 332 GVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKC------ 385
Query: 314 ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVW-TALFSGYVKAQNC 372
G+++EA R F + K++V W T LF+ V
Sbjct: 386 -------------------------GDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLAD 420
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL---RMGVQMDKKL 429
+AL L + + G+ D + + LL C+ + G I ++ R+ +++D
Sbjct: 421 QAL--KLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDH-- 476
Query: 430 ISTLVDMYSKCGNMTYAE 447
++ ++DM+ + G++ A+
Sbjct: 477 VTCMIDMFGRGGHLAEAK 494
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 124/268 (46%), Gaps = 38/268 (14%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTI 62
S N+ + H +K G + N ++ Y+K ++ + + + SWN+I
Sbjct: 218 SSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSI 277
Query: 63 ISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGY-INAEGYEADALKLFIEMQSADEHI 121
I AC+K + ++A +F +P K++VT+ +M+ GY N +G + AL+ F+EM + +
Sbjct: 278 IDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQ--ALRFFVEMMKSG--V 333
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
D F + L+ C L +G G+ +H ++ + ++L+++Y+KC +EA R
Sbjct: 334 DSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADR 393
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
F G +L+S WNT++ + +G A+
Sbjct: 394 AF-GDIANKDLVS--------------------------------WNTMLFAFGVHGLAD 420
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSAC 269
+ LKL+ M +G++ + TF L+ C
Sbjct: 421 QALKLYDNMIASGIKPDNVTFIGLLTTC 448
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 40/211 (18%)
Query: 328 ISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKA---QNCEALFDLLSEFVT 384
++S I + G + AR+ FD + E + V W + + Y + Q ALF L
Sbjct: 7 LTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDA 66
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
K D +L CA + G++I + ++R G + ++L+DMY KC +
Sbjct: 67 KP----DDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTL 122
Query: 445 YAEIIFQN------------------------------FIE---RDLVLYNVMIACYAHH 471
A +F++ F+E R +N+MI+ +AH
Sbjct: 123 SANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHC 182
Query: 472 GHEEKAILLFEEMLEKGIKPDAVTFVAILSA 502
G E + LF+EMLE KPD TF ++++A
Sbjct: 183 GKLESCLSLFKEMLESEFKPDCYTFSSLMNA 213
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 2/117 (1%)
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
+L S + + +K G + A +F E D V +N M+ Y+ G ++AI LF ++
Sbjct: 6 RLTSKIASL-AKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFS 64
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQ 544
KPD +F AILS G+V+ G K S+ +ID+YG+ +
Sbjct: 65 DAKPDDYSFTAILSTCASLGNVKFGRK-IQSLVIRSGFCASLPVNNSLIDMYGKCSD 120
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 301 bits (772), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 189/606 (31%), Positives = 311/606 (51%), Gaps = 74/606 (12%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N +I + +K + A LF+ P+K+++++ ++L GY +A++LF M
Sbjct: 288 NVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGY-KQNALHKEAMELFTSMSKFG- 345
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEA 179
++ D + +S L C L +GFG Q+HA+ +K + + +SLIDMY+KC C +A
Sbjct: 346 -LKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDA 404
Query: 180 CRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNG- 238
+VF+ + AA D V +N +I GY + G
Sbjct: 405 RKVFD-------------IFAAA--------------------DVVLFNAMIEGYSRLGT 431
Query: 239 --DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFV 296
+ E L +F M +R + TF S L A L ++ +K+IH + K GL + F
Sbjct: 432 QWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFA 491
Query: 297 SSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNV 356
S ++DVY C Y L+ ++R FD + K++
Sbjct: 492 GSALIDVYSNC---------------------------YCLK----DSRLVFDEMKVKDL 520
Query: 357 VVWTALFSGYV-KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIH 415
V+W ++F+GYV +++N EAL L +++E D ++ A A++ G+E H
Sbjct: 521 VIWNSMFAGYVQQSENEEALNLFLELQLSRER--PDEFTFANMVTAAGNLASVQLGQEFH 578
Query: 416 AYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEE 475
+L+ G++ + + + L+DMY+KCG+ A F + RD+V +N +I+ YA+HG +
Sbjct: 579 CQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGK 638
Query: 476 KAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACM 535
KA+ + E+M+ +GI+P+ +TFV +LSA H G VE G K F M + I PET+HY CM
Sbjct: 639 KALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCM 697
Query: 536 IDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNK 595
+ L GRA +L KA E ++ +PT+ A++ S L+ C N ELA A E + + +
Sbjct: 698 VSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDS 757
Query: 596 ARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTN 655
+ L+N+YA++G W E ++R++M+ + G SW+ + E+HIF D SH K N
Sbjct: 758 GSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKAN 817
Query: 656 AIYSVL 661
IY VL
Sbjct: 818 QIYEVL 823
Score = 163 bits (412), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 122/500 (24%), Positives = 232/500 (46%), Gaps = 74/500 (14%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
+R+V+ +I +K ++ AR +FD+ P K VT+ +M+ G + G +L+LF
Sbjct: 180 DRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKM-GRSYVSLQLFY 238
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
++ ++++ D + +++ L+ C L + G+Q+HA +++ + ++ LID Y K
Sbjct: 239 QLM--EDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVK 296
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C G + A K F P N +SW TL+S
Sbjct: 297 C--------------------------------GRVIAAHKLFNGMPNKN-IISWTTLLS 323
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
GY QN +E ++LF M + G++ + + +S L++C L + ++H++ +K L +
Sbjct: 324 GYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGN 383
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
+ +V++ ++D+Y KC+ + +AR+ FD
Sbjct: 384 DSYVTNSLIDMYAKCDCLT-------------------------------DARKVFDIFA 412
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEF--VTKEGVVTDALILVILLGACALQAALHP 410
+VV++ A+ GY + L + L+ F + + L V LL A A +L
Sbjct: 413 AADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGL 472
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
K+IH + + G+ +D S L+D+YS C + + ++F +DLV++N M A Y
Sbjct: 473 SKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQ 532
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETD 530
E+A+ LF E+ +PD TF +++A + SV++G+++ + K E +
Sbjct: 533 QSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLL---KRGLECN 589
Query: 531 HYA--CMIDLYGRANQLEKA 548
Y ++D+Y + E A
Sbjct: 590 PYITNALLDMYAKCGSPEDA 609
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 179/370 (48%), Gaps = 51/370 (13%)
Query: 189 EVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
E++ N ++ R G M A K F + PE N VSW+T++S +G EE L +F+
Sbjct: 76 ELDTYLSNILINLYSRAGGMVYARKVFEKMPERN-LVSWSTMVSACNHHGIYEESLVVFL 134
Query: 249 ---RMGENGVRWNEHTFASALSACCGL--RNVKCAKEIHSWVLKNGLISNPFVSSGIVDV 303
R ++ NE+ +S + AC GL R ++ S+++K+G + +V + ++D
Sbjct: 135 EFWRTRKDSP--NEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDF 192
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y K GN++ AR FD+L EK+ V WT +
Sbjct: 193 YLK-------------------------------DGNIDYARLVFDALPEKSTVTWTTMI 221
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
SG VK L + + ++ VV D IL +L AC++ L GK+IHA+ILR G+
Sbjct: 222 SGCVKMGRSYVSLQLFYQLM-EDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGL 280
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
+MD L++ L+D Y KCG + A +F ++++ + +++ Y + ++A+ LF
Sbjct: 281 EMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTS 340
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVE-MGEKYFNSMTADYKISPE--TDHYAC--MIDL 538
M + G+KPD +IL++ C S+ +G F + Y I D Y +ID+
Sbjct: 341 MSKFGLKPDMYACSSILTS---CASLHALG---FGTQVHAYTIKANLGNDSYVTNSLIDM 394
Query: 539 YGRANQLEKA 548
Y + + L A
Sbjct: 395 YAKCDCLTDA 404
Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 155/393 (39%), Gaps = 106/393 (26%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
+ SL L + + H K GL L + LI +YS L++SR +FDEM +++ WN
Sbjct: 467 LTSLGLSKQI--HGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWN 524
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
SM GY+ E +AL LF+E+Q + E
Sbjct: 525 -------------------------------SMFAGYVQQSENE-EALNLFLELQLSRE- 551
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
R DEFT + + L +V G++ H ++K + + + ++L+DMY+KC E+A
Sbjct: 552 -RPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAH 610
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
+ F+ D V WN++IS Y +G+
Sbjct: 611 KAFDSAASR---------------------------------DVVCWNSVISSYANHGEG 637
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
++ L++ +M G+ N TF LSAC H+ ++++GL
Sbjct: 638 KKALQMLEKMMSEGIEPNYITFVGVLSACS-----------HAGLVEDGL---------- 676
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSL-TEKNVVVW 359
E ML + M+ G + +AR + + T+ +VW
Sbjct: 677 ----------KQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVW 726
Query: 360 TALFSGYVKAQNCEALFDLLSEFVTKEGVVTDA 392
+L SG KA N E L+E + +++D
Sbjct: 727 RSLLSGCAKAGNVE-----LAEHAAEMAILSDP 754
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 83/168 (49%), Gaps = 7/168 (4%)
Query: 408 LHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIAC 467
LH +H I+ G+++D L + L+++YS+ G M YA +F+ ER+LV ++ M++
Sbjct: 60 LHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSA 119
Query: 468 YAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKY--FNSMTADYKI 525
HHG E+++++F E + D+ + S + C ++ ++ F + K
Sbjct: 120 CNHHGIYEESLVVFLEFWRT--RKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKS 177
Query: 526 SPETDHY--ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVC 571
+ D Y +ID Y + ++ A ++P E+ V + ++ C
Sbjct: 178 GFDRDVYVGTLLIDFYLKDGNIDYARLVFDALP-EKSTVTWTTMISGC 224
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 299 bits (766), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 193/645 (29%), Positives = 320/645 (49%), Gaps = 89/645 (13%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLV 88
N ++ Y + L +E+R+LFDEM ERNV SWN ++S IK+ + +AR++F+ P +++V
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV 111
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLH 148
++ +M+ GY+ EG +A LF M +E V+ T V FG +
Sbjct: 112 SWTAMVKGYMQ-EGMVGEAESLFWRMPERNE--------VSWT---------VMFGGLI- 152
Query: 149 AFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEM 208
+D L DM ++++ M+ CREG +
Sbjct: 153 -------DDGRIDKARKLYDMMPV-----------------KDVVASTNMIGGLCREGRV 188
Query: 209 EMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG-VRWNEHTFASALS 267
+ A F E N V+W T+I+GY QN + KLF M E V W LS
Sbjct: 189 DEARLIFDEMRERN-VVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLS 247
Query: 268 ACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFS 327
G I + AE + ++ +
Sbjct: 248 ---------------------GRIED-------------------AEEFFEVMPMKPVIA 267
Query: 328 ISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY-VKAQNCEALFDLLSEFVTKE 386
++MIVG+ G + +ARR FD + +++ W + Y K EAL DL ++ + K+
Sbjct: 268 CNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEAL-DLFAQ-MQKQ 325
Query: 387 GVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYA 446
GV L+ +L CA A+L G+++HA+++R D + S L+ MY KCG + A
Sbjct: 326 GVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKA 385
Query: 447 EIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHC 506
+++F F +D++++N +I+ YA HG E+A+ +F EM G P+ VT +AIL+A +
Sbjct: 386 KLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYA 445
Query: 507 GSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGS 566
G +E G + F SM + + ++P +HY+C +D+ GRA Q++KA+E ++S+ + DA + G+
Sbjct: 446 GKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGA 505
Query: 567 FLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKG 626
L C+ + +LA A +KL E +N YV L+++ A+ W ++ +RK MR
Sbjct: 506 LLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNV 565
Query: 627 NRFAGCSWVYVEHEIHIFTVGDV-SHPKTNAIYSVLAIFTGELYE 670
++F GCSW+ V ++H+FT G + +HP+ I +L G L E
Sbjct: 566 SKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLRE 610
Score = 119 bits (298), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 116/505 (22%), Positives = 217/505 (42%), Gaps = 68/505 (13%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
++ N L+ Y K+ ++ E+R +F+ MPERNV SW ++ ++ + +A SLF P +
Sbjct: 80 VSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER 139
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQSAD------------EHIRMDE-------- 125
+ V++ M G I+ +G A KL+ M D R+DE
Sbjct: 140 NEVSWTVMFGGLID-DGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEM 198
Query: 126 -----FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
T T+ + + V R+L M + + + +S++ Y+ E+A
Sbjct: 199 RERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTE----VSWTSMLLGYTLSGRIEDAE 254
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
FE + +I+ NAM+ GE+ A + F E D +W +I Y + G
Sbjct: 255 EFFEVMPMK-PVIACNAMIVGFGEVGEISKARRVF-DLMEDRDNATWRGMIKAYERKGFE 312
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
E L LF +M + GVR + + S LS C L +++ +++H+ +++ + +V+S +
Sbjct: 313 LEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVL 372
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
+ +Y KC G + +A+ FD + K++++W
Sbjct: 373 MTMYVKC-------------------------------GELVKAKLVFDRFSSKDIIMWN 401
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI-L 419
++ SGY E + E + G + + + L+ +L AC+ L G EI +
Sbjct: 402 SIISGYASHGLGEEALKIFHEMPSS-GTMPNKVTLIAILTACSYAGKLEEGLEIFESMES 460
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYA-EIIFQNFIERDLVLYNVMIACYAHHGHEEKAI 478
+ V + S VDM + G + A E+I I+ D ++ ++ H + A
Sbjct: 461 KFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAE 520
Query: 479 LLFEEMLEKGIKPDAVTFVAILSAF 503
+ +++ E +PD +LS+
Sbjct: 521 VAAKKLFEN--EPDNAGTYVLLSSI 543
Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 153/349 (43%), Gaps = 53/349 (15%)
Query: 199 VAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE-NGVRW 257
++ R G++ A K F+ + SWN+++SGY NG +E +LF M E N V W
Sbjct: 24 ISRLSRIGKINEARK-FFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSW 82
Query: 258 NEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS-----NPFVSSGIV----DVYCKCE 308
N +S R + A+ + + + ++S ++ G+V ++ +
Sbjct: 83 N-----GLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMP 137
Query: 309 NMNYAESMLLLKG------------------VRNSFSISSMIVGYSLQGNMEEARRHFDS 350
N ++ G V++ + ++MI G +G ++EAR FD
Sbjct: 138 ERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDE 197
Query: 351 LTEKNVVVWTALFSGYVKAQNCEA---LFDLLSEFVTKEGVVTDALILVILLGACALQAA 407
+ E+NVV WT + +GY + + LF+++ E T+ +LLG L
Sbjct: 198 MRERNVVTWTTMITGYRQNNRVDVARKLFEVMPE-------KTEVSWTSMLLGY-TLSGR 249
Query: 408 LHPGKEIHAYILRMGVQMDKKLIS--TLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMI 465
+ +E V K +I+ ++ + + G ++ A +F +RD + MI
Sbjct: 250 IEDAEEFFE------VMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMI 303
Query: 466 ACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEK 514
Y G E +A+ LF +M ++G++P + ++ILS S++ G +
Sbjct: 304 KAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQ 352
Score = 33.9 bits (76), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 13/124 (10%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H ++ + L+ +Y K L +++ +FD +++ WN+IIS SH L
Sbjct: 354 HAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISG-YASHGL 412
Query: 73 -KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEA---DALKLFIEMQSADEHIRMDEFTV 128
++A +F P + L + A Y + L++F M+S +F V
Sbjct: 413 GEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMES--------KFCV 464
Query: 129 TSTL 132
T T+
Sbjct: 465 TPTV 468
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 298 bits (763), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 192/659 (29%), Positives = 323/659 (49%), Gaps = 104/659 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K+G + + L+ +Y+K NL S ++FDEMPER
Sbjct: 130 HTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPER------------------ 171
Query: 73 KQARSLFDSSPHKDLVTYNSML-CGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTST 131
D+ ++N+++ C Y + E +A L+LF M+S+ + ++T
Sbjct: 172 -------------DVASWNTVISCFYQSGEAEKA--LELFGRMESSG--FEPNSVSLTVA 214
Query: 132 LNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVN 191
++ C +LL + G+++H VK + + S+L+DMY KC C E A VF+
Sbjct: 215 ISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQ------- 267
Query: 192 LISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG 251
+M K+ V+WN++I GYV GD++ +++ RM
Sbjct: 268 -----------------KMPRKSL---------VAWNSMIKGYVAKGDSKSCVEILNRMI 301
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
G R ++ T S L AC RN+ K IH +V+++ + ++ +V+ ++D+Y KC N
Sbjct: 302 IEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEAN 361
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVV-VWTALFSGYVKAQ 370
AE++ S T+K+V W + S Y+
Sbjct: 362 LAETVF--------------------------------SKTQKDVAESWNVMISSYISVG 389
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
N ++ + V+ GV D + +L AC+ AAL GK+IH I ++ D+ L+
Sbjct: 390 NWFKAVEVYDQMVSV-GVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLL 448
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
S L+DMYSKCGN A IF + ++D+V + VMI+ Y HG +A+ F+EM + G+K
Sbjct: 449 SALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLK 508
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
PD VT +A+LSA H G ++ G K+F+ M + Y I P +HY+CMID+ GRA +L +A E
Sbjct: 509 PDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYE 568
Query: 551 FMKSIP-TEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEG 609
++ P T ++A +L + + C L+ L L+ ++ + Y+ L N+YA+
Sbjct: 569 IIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGE 628
Query: 610 NWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
+W R+R +M+ M + GCSW+ + ++ F D SH + +Y LA+ +G +
Sbjct: 629 SWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECLALLSGHM 687
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 119/512 (23%), Positives = 216/512 (42%), Gaps = 117/512 (22%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
R L L+ H + +K G L + L+ +Y K + L +R++F +MP +++ +WN+
Sbjct: 220 RLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNS 279
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I + D K + N M+ E
Sbjct: 280 MIKGYVAKGDSKSCVEIL-----------NRMII-----------------------EGT 305
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
R + T+TS L C + N+ G+ +H +++++ +A + SLID+Y KC
Sbjct: 306 RPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKC-------- 357
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
GE +A +T + + + + A SWN +IS Y+ G+
Sbjct: 358 ------------------------GEANLA-ETVFSKTQKDVAESWNVMISSYISVGNWF 392
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
+ ++++ +M GV+ + TF S L AC L ++ K+IH + ++ L ++ + S ++
Sbjct: 393 KAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALL 452
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
D+Y KC GN +EA R F+S+ +K+VV WT
Sbjct: 453 DMYSKC-------------------------------GNEKEAFRIFNSIPKKDVVSWTV 481
Query: 362 LFSGY-VKAQNCEAL--FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYI 418
+ S Y Q EAL FD + +F G+ D + L+ +L AC + G + + +
Sbjct: 482 MISAYGSHGQPREALYQFDEMQKF----GLKPDGVTLLAVLSACGHAGLIDEGLKFFSQM 537
Query: 419 L-RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERD---LVLYNVMIACYAHHGH- 473
+ G++ + S ++D+ + G + A I Q E +L + AC H H
Sbjct: 538 RSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHS 597
Query: 474 --EEKAILLFEEMLEKGIKPDAVTFVAILSAF 503
+ A LL E + DA T++ + + +
Sbjct: 598 LGDRIARLLVENYPD-----DASTYMVLFNLY 624
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 157/353 (44%), Gaps = 37/353 (10%)
Query: 222 NDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGV-RWNEHTFASALSACCGLRNVKCAKE 280
+D WN+L+SGY +N + L++F R+ + + TF + + A L +
Sbjct: 69 SDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRM 128
Query: 281 IHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGN 340
IH+ V+K+G + + V+S +V +Y K F++
Sbjct: 129 IHTLVVKSGYVCDVVVASSLVGMYAK-------------------FNL------------ 157
Query: 341 MEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLG 400
E + + FD + E++V W + S + ++ E +L + G +++ L + +
Sbjct: 158 FENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGR-MESSGFEPNSVSLTVAIS 216
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL 460
AC+ L GKEIH ++ G ++D+ + S LVDMY KC + A +FQ + LV
Sbjct: 217 ACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVA 276
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
+N MI Y G + + + M+ +G +P T +IL A ++ G K+ +
Sbjct: 277 WNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHG-KFIHGYV 335
Query: 521 ADYKISPETDHYACMIDLY---GRANQLEKAIEFMKSIPTEEDAVILGSFLNV 570
++ + +IDLY G AN E + E V++ S+++V
Sbjct: 336 IRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISV 388
Score = 83.2 bits (204), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 122/286 (42%), Gaps = 35/286 (12%)
Query: 273 RNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMI 332
++++ K +H +L GL + + +++VY C++ A + V +F I S
Sbjct: 18 KSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSA------RHVFENFDIRS-- 69
Query: 333 VGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDA 392
+V +W +L SGY K ++ + V D+
Sbjct: 70 ----------------------DVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDS 107
Query: 393 LILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQN 452
++ A G+ IH +++ G D + S+LV MY+K + +F
Sbjct: 108 FTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDE 167
Query: 453 FIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMG 512
ERD+ +N +I+C+ G EKA+ LF M G +P++V+ +SA +E G
Sbjct: 168 MPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERG 227
Query: 513 EKYFNSMTADYKISPETDHY--ACMIDLYGRANQLEKAIEFMKSIP 556
++ K E D Y + ++D+YG+ + LE A E + +P
Sbjct: 228 KEIHRKCV---KKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMP 270
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 298 bits (763), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 188/622 (30%), Positives = 312/622 (50%), Gaps = 80/622 (12%)
Query: 53 ERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
E N F NT+++ K L ++ L S +DLVT+N++L E +AL+
Sbjct: 233 ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQL-LEALEYLR 291
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSN-DASGFAVSSLIDMYS 171
EM E + DEFT++S L C L + G++LHA+ +K + D + F S+L+DMY
Sbjct: 292 EM--VLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYC 349
Query: 172 KCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLI 231
C+ RVF+G F R+ L WN +I
Sbjct: 350 NCKQVLSGRRVFDG----------------------------MFDRKIGL-----WNAMI 376
Query: 232 SGYVQNGDAEEGLKLFVRMGEN-GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL 290
+GY QN +E L LF+ M E+ G+ N T A + AC + IH +V+K GL
Sbjct: 377 AGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL 436
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
+ FV + ++D+Y + G ++ A R F
Sbjct: 437 DRDRFVQNTLMDMYSRL-------------------------------GKIDIAMRIFGK 465
Query: 351 LTEKNVVVWTALFSGYVKAQNCEALFDLL----------SEFVTKEGVVTDALILVILLG 400
+ ++++V W + +GYV +++ E LL S+ ++ + +++ L+ +L
Sbjct: 466 MEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILP 525
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL 460
+CA +AL GKEIHAY ++ + D + S LVDMY+KCG + + +F +++++
Sbjct: 526 SCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVIT 585
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
+NV+I Y HG+ ++AI L M+ +G+KP+ VTF+++ +A H G V+ G + F M
Sbjct: 586 WNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMK 645
Query: 521 ADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE-EDAVILGSFLNVCRLNRNAEL 579
DY + P +DHYAC++DL GRA ++++A + M +P + A S L R++ N E+
Sbjct: 646 PDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEI 705
Query: 580 AGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEH 639
A + L++LE N + YV LAN+Y++ G W + +R+ M+ + GCSW+
Sbjct: 706 GEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGD 765
Query: 640 EIHIFTVGDVSHPKTNAIYSVL 661
E+H F GD SHP++ + L
Sbjct: 766 EVHKFVAGDSSHPQSEKLSGYL 787
Score = 167 bits (422), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 141/578 (24%), Positives = 251/578 (43%), Gaps = 126/578 (21%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
++ + L + + HV G+ T+ N L+++Y K K+FD + ERN SWN
Sbjct: 110 LQDMELGKQIHAHVYKFGYGVDSVTVA-NTLVNLYRKCGDFGAVYKVFDRISERNQVSWN 168
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
++I S LC + E +E AL+ F M DE+
Sbjct: 169 SLI----------------------------SSLCSF---EKWEM-ALEAFRCM--LDEN 194
Query: 121 IRMDEFTVTSTLNLCVKLL---NVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYE 177
+ FT+ S + C L + G+Q+HA+ ++ + + F +++L+ MY K
Sbjct: 195 VEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLR-KGELNSFIINTLVAMYGKL---- 249
Query: 178 EACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQN 237
+ ++ L +F + D V+WNT++S QN
Sbjct: 250 -------------------------GKLASSKVLLGSFGGR----DLVTWNTVLSSLCQN 280
Query: 238 GDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNG-LISNPFV 296
E L+ M GV +E T +S L AC L ++ KE+H++ LKNG L N FV
Sbjct: 281 EQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFV 340
Query: 297 SSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNV 356
S +VD+YC C+ +L G RR FD + ++ +
Sbjct: 341 GSALVDMYCNCKQ--------VLSG-----------------------RRVFDGMFDRKI 369
Query: 357 VVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHA 416
+W A+ +GY + ++ + L G++ ++ + ++ AC A + IH
Sbjct: 370 GLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHG 429
Query: 417 YILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
++++ G+ D+ + +TL+DMYS+ G + A IF +RDLV +N MI Y H E
Sbjct: 430 FVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHED 489
Query: 477 AILLFEEM------LEKG-----IKPDAVTFVAILSAFRHCGSVEMGEKYF-----NSMT 520
A+LL +M + KG +KP+++T + IL + ++ G++ N++
Sbjct: 490 ALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLA 549
Query: 521 ADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE 558
D + + ++D+Y + L+ + + IP +
Sbjct: 550 TDVAVG------SALVDMYAKCGCLQMSRKVFDQIPQK 581
Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 122/273 (44%), Gaps = 78/273 (28%)
Query: 7 KEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISAC 66
KEA+ H +K GL N L+ +YS+ + + ++F +M +R++ +WNT+I+
Sbjct: 424 KEAI--HGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMIT-- 479
Query: 67 IKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI----- 121
GY+ +E +E DAL L +MQ+ + +
Sbjct: 480 -----------------------------GYVFSEHHE-DALLLLHKMQNLERKVSKGAS 509
Query: 122 ----RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV-SSLIDMYSKCRCY 176
+ + T+ + L C L + G+++HA+ +K +N A+ AV S+L+DMY+KC C
Sbjct: 510 RVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIK-NNLATDVAVGSALVDMYAKCGC- 567
Query: 177 EEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQ 236
++M+ K F + P+ N ++WN +I Y
Sbjct: 568 -------------------------------LQMSRKVFDQIPQKN-VITWNVIIMAYGM 595
Query: 237 NGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
+G+ +E + L M GV+ NE TF S +AC
Sbjct: 596 HGNGQEAIDLLRMMMVQGVKPNEVTFISVFAAC 628
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 298 bits (763), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 183/658 (27%), Positives = 339/658 (51%), Gaps = 55/658 (8%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + +K+G + +LI YS +N ++ + +P+ ++S++++I A K+
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
Q+ +F ++F D H+ + F V
Sbjct: 98 TQSIGVFS----------------------------RMFSHGLIPDSHVLPNLFKV---- 125
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C +L G+Q+H + D F S+ MY +C +A +VF+ +++ ++
Sbjct: 126 --CAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDK-DV 182
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELN---DAVSWNTLISGYVQNGDAEEGLKLFVR 249
++ +A++ A R+G +E ++ + VSWN ++SG+ ++G +E + +F +
Sbjct: 183 VTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQK 242
Query: 250 MGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCEN 309
+ G ++ T +S L + + + IH +V+K GL+ + V S ++D+Y K +
Sbjct: 243 IHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGH 302
Query: 310 MNYAESM-----LLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK----NVVVWT 360
+ S+ ++ GV N++ I G S G +++A F+ E+ NVV WT
Sbjct: 303 VYGIISLFNQFEMMEAGVCNAY-----ITGLSRNGLVDKALEMFELFKEQTMELNVVSWT 357
Query: 361 ALFSGYVK-AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL 419
++ +G + ++ EAL +L E GV + + + +L AC AAL G+ H + +
Sbjct: 358 SIIAGCAQNGKDIEAL-ELFREMQVA-GVKPNHVTIPSMLPACGNIAALGHGRSTHGFAV 415
Query: 420 RMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
R+ + + + S L+DMY+KCG + ++I+F ++LV +N ++ ++ HG ++ +
Sbjct: 416 RVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMS 475
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
+FE ++ +KPD ++F ++LSA G + G KYF M+ +Y I P +HY+CM++L
Sbjct: 476 IFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLL 535
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYV 599
GRA +L++A + +K +P E D+ + G+ LN CRL N +LA A EKL LE N YV
Sbjct: 536 GRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYV 595
Query: 600 QLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAI 657
L+N+YAA+G W E+ IR +M + + GCSW+ V++ ++ GD SHP+ + I
Sbjct: 596 LLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQI 653
>sp|P0C8Q8|PP394_ARATH Pentatricopeptide repeat-containing protein At5g19020,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E42 PE=2
SV=1
Length = 685
Score = 298 bits (762), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 181/615 (29%), Positives = 327/615 (53%), Gaps = 12/615 (1%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H + +K+GL N ++++Y+K LL ++ +F + + + S+N ++ ++S L
Sbjct: 64 HCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRL 123
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
A LFD P + V+Y +++ GY + ++A++LF EM++ I ++E T+ + +
Sbjct: 124 WDALKLFDVMPERSCVSYTTLIKGYAQNNQW-SEAMELFREMRNLG--IMLNEVTLATVI 180
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C L + R L + +K + F ++L+ MY C C ++A ++F+ E NL
Sbjct: 181 SACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPER-NL 239
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
++ N M+ + G +E A + F + E D VSW T+I G ++ +E L + M
Sbjct: 240 VTWNVMLNGYSKAGLIEQAEELFDQITE-KDIVSWGTMIDGCLRKNQLDEALVYYTEMLR 298
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAK--EIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
G++ +E LSA R+V +K ++H ++K G F+ + I+ Y ++
Sbjct: 299 CGMKPSEVMMVDLLSA--SARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDI 356
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
A + S +++I G+ G +E+AR FD +K++ W A+ SGY ++
Sbjct: 357 KLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSL 416
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
+ + L E ++ V DA+ +V + A + +L GK H Y+ + + L
Sbjct: 417 SPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLT 476
Query: 431 STLVDMYSKCGNMTYAEIIF---QNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
+ ++DMY+KCG++ A IF +N + +N +I A HGH + A+ L+ ++
Sbjct: 477 AAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSL 536
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEK 547
IKP+++TFV +LSA H G VE+G+ YF SM +D+ I P+ HY CM+DL G+A +LE+
Sbjct: 537 PIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEE 596
Query: 548 AIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAA 607
A E +K +P + D +I G L+ R + N E+A A +L ++ ++ V L+NVYA
Sbjct: 597 AKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYAD 656
Query: 608 EGNWAEMGRIRKQMR 622
G W ++ +R++MR
Sbjct: 657 AGRWEDVALVREEMR 671
Score = 183 bits (465), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 138/484 (28%), Positives = 226/484 (46%), Gaps = 49/484 (10%)
Query: 125 EFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFE 184
E + S L C +V GRQ+H ++K+ D++G+ +S+++MY+KCR +A VF
Sbjct: 41 ERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFR 100
Query: 185 GCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGL 244
+++ S N MV R + ALK F PE VS+ TLI GY QN E +
Sbjct: 101 D-HAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPE-RSCVSYTTLIKGYAQNNQWSEAM 158
Query: 245 KLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
+LF M G+ NE T A+ +SAC L + + + S +K L FVS+ ++ +Y
Sbjct: 159 ELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMY 218
Query: 305 CKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFS 364
C C + A + RN + + M+ GYS G +E+A FD +TEK++V W +
Sbjct: 219 CLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMID 278
Query: 365 GYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
G ++ + +E + + G+ +++V LL A A G ++H I++ G
Sbjct: 279 GCLRKNQLDEALVYYTEML-RCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFD 337
Query: 425 MDKKLISTLVDMYS-------------------------------KCGNMTYAEIIFQNF 453
L +T++ Y+ K G + A +F
Sbjct: 338 CYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQT 397
Query: 454 IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG-IKPDAVTFVAILSAFRHCGSVEMG 512
++D+ +N MI+ YA + A+ LF EM+ +KPDA+T V++ SA GS+E G
Sbjct: 398 HDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEG 457
Query: 513 EK---YFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM-------KSIPTEEDAV 562
++ Y N T I P + A +ID+Y + +E A+ S + +A+
Sbjct: 458 KRAHDYLNFST----IPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAI 513
Query: 563 ILGS 566
I GS
Sbjct: 514 ICGS 517
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 153/345 (44%), Gaps = 38/345 (11%)
Query: 2 RSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNT 61
RS+ + L H +K G +IH Y+ N ++ + + F+ + ++ S N
Sbjct: 317 RSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNA 376
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I+ +K+ ++QAR +FD + KD+ ++N+M+ GY + + AL LF EM S+ + +
Sbjct: 377 LIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQL-ALHLFREMISSSQ-V 434
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
+ D T+ S + L ++ G++ H ++ ++ + +++IDMY+KC
Sbjct: 435 KPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKC-------- 486
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAV--SWNTLISGYVQNGD 239
G +E AL F + ++ + WN +I G +G
Sbjct: 487 ------------------------GSIETALNIFHQTKNISSSTISPWNAIICGSATHGH 522
Query: 240 AEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSG 299
A+ L L+ + ++ N TF LSACC V+ K + + I G
Sbjct: 523 AKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYG 582
Query: 300 -IVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYS-LQGNME 342
+VD+ K + A+ M+ V+ I M++ S GN+E
Sbjct: 583 CMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVE 627
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 295 bits (755), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 203/673 (30%), Positives = 321/673 (47%), Gaps = 113/673 (16%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K+G L IT+N LI +Y K + K+FD MPERNV SW+ ++S + + DL
Sbjct: 29 HCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDL 88
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
K + SLF + + I +EFT ++ L
Sbjct: 89 KGSLSLFS----------------------------------EMGRQGIYPNEFTFSTNL 114
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C L + G Q+H F +K + +SL+DMYSKC EA +VF + +L
Sbjct: 115 KACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDR-SL 173
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
IS NAM+A G AL TF G +Q + +E
Sbjct: 174 ISWNAMIAGFVHAGYGSKALDTF-----------------GMMQEANIKE---------- 206
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL--ISNPFVSSGIVDVYCKCENM 310
R +E T S L AC + K+IH +++++G S+ ++ +VD+Y KC
Sbjct: 207 ---RPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKC--- 260
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
G + AR+ FD + EK ++ W++L GY AQ
Sbjct: 261 ----------------------------GYLFSARKAFDQIKEKTMISWSSLILGY--AQ 290
Query: 371 NCE-----ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
E LF L E ++ D+ L ++G A A L GK++ A +++ +
Sbjct: 291 EGEFVEAMGLFKRLQELNSQ----IDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGL 346
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEML 485
+ +++++VDMY KCG + AE F +D++ + V+I Y HG +K++ +F EML
Sbjct: 347 ETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEML 406
Query: 486 EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQL 545
I+PD V ++A+LSA H G ++ GE+ F+ + + I P +HYAC++DL GRA +L
Sbjct: 407 RHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRL 466
Query: 546 EKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVY 605
++A + ++P + + I + L++CR++ + EL E + LLR++ N A YV ++N+Y
Sbjct: 467 KEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLY 526
Query: 606 AAEGNWAEMGRIRK--QMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAI 663
G W E G R+ ++G+K + AG SWV +E E+H F G+ SHP T I L
Sbjct: 527 GQAGYWNEQGNARELGNIKGLK--KEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKE 584
Query: 664 FTGELYEIAGAFY 676
L E G Y
Sbjct: 585 AERRLREELGYVY 597
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/426 (26%), Positives = 187/426 (43%), Gaps = 72/426 (16%)
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
+ S L +C + G Q+H +++K+ + + + LIDMY KCR
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCR------------- 55
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
E MA K F PE N VSW+ L+SG+V NGD + L LF
Sbjct: 56 -------------------EPLMAYKVFDSMPERN-VVSWSALMSGHVLNGDLKGSLSLF 95
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
MG G+ NE TF++ L AC L ++ +IH + LK G V + +VD+Y KC
Sbjct: 96 SEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKC 155
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
+N EA + F + +++++ W A+ +G+V
Sbjct: 156 GRIN-------------------------------EAEKVFRRIVDRSLISWNAMIAGFV 184
Query: 368 KAQ-NCEAL--FDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQ 424
A +AL F ++ E KE D L LL AC+ ++ GK+IH +++R G
Sbjct: 185 HAGYGSKALDTFGMMQEANIKE--RPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFH 242
Query: 425 MDKK--LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
+ +LVD+Y KCG + A F E+ ++ ++ +I YA G +A+ LF+
Sbjct: 243 CPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFK 302
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRA 542
+ E + D+ +I+ F + G K ++ ET ++D+Y +
Sbjct: 303 RLQELNSQIDSFALSSIIGVFADFALLRQG-KQMQALAVKLPSGLETSVLNSVVDMYLKC 361
Query: 543 NQLEKA 548
+++A
Sbjct: 362 GLVDEA 367
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 117/544 (21%), Positives = 216/544 (39%), Gaps = 142/544 (26%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L++ L H +K G + N L+ +YSK + E+ K+F + +R++ SW
Sbjct: 123 LEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISW------ 176
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
N+M+ G+++A GY + AL F MQ A+ R DE
Sbjct: 177 -------------------------NAMIAGFVHA-GYGSKALDTFGMMQEANIKERPDE 210
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSN--DASGFAVSSLIDMYSKCRCYEEACRVF 183
FT+TS L C + G+Q+H F+V++ +S SL+D+Y KC A + F
Sbjct: 211 FTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAF 270
Query: 184 EGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELN---DAVSWNTLISGYVQNGDA 240
+ E+ +IS ++++ +EGE A+ F R ELN D+ + +++I +
Sbjct: 271 DQIKEK-TMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALL 329
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
+G ++ AL+ VK + + VL + +
Sbjct: 330 RQGKQM-----------------QALA-------VKLPSGLETSVLNS-----------V 354
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
VD+Y KC G ++EA + F + K+V+ WT
Sbjct: 355 VDMYLKC-------------------------------GLVDEAEKCFAEMQLKDVISWT 383
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
+ +GY K + + E + + + D + + +L AC+ + G+E+ + +L
Sbjct: 384 VVITGYGKHGLGKKSVRIFYEML-RHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLE 442
Query: 421 M-GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAIL 479
G++ + + +VD+ + G + A+ +
Sbjct: 443 THGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTM-------------------------- 476
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
IKP+ + +LS R G +E+G++ + +P +Y M +LY
Sbjct: 477 --------PIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPA--NYVMMSNLY 526
Query: 540 GRAN 543
G+A
Sbjct: 527 GQAG 530
>sp|P0C7R0|PPR69_ARATH Pentatricopeptide repeat-containing protein At1g32415,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E56 PE=2
SV=1
Length = 761
Score = 293 bits (750), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 224/683 (32%), Positives = 339/683 (49%), Gaps = 64/683 (9%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLV 88
L+ Y+K L E+R LF+ MPERN+ + N +++ +K + +A +LF P K++V
Sbjct: 81 TSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVV 139
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVG-FGRQL 147
++ ML + +G DA++LF EM E V S L L+ G +
Sbjct: 140 SWTVMLTALCD-DGRSEDAVELFDEMP---------ERNVVSWNTLVTGLIRNGDMEKAK 189
Query: 148 HAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGE 207
F S D + +++I Y + EEA +F G E N+++ +MV CR G+
Sbjct: 190 QVFDAMPSRDVVSW--NAMIKGYIENDGMEEAKLLF-GDMSEKNVVTWTSMVYGYCRYGD 246
Query: 208 MEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE--NGVRWNEHTFASA 265
+ A + F PE N VSW +ISG+ N E L LF+ M + + V N T S
Sbjct: 247 VREAYRLFCEMPERN-IVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISL 305
Query: 266 LSACCGL--RNVKCAKEIHSWVLKNGL------------ISNPFVSSG------------ 299
AC GL + +++H+ V+ NG + + + SSG
Sbjct: 306 AYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNES 365
Query: 300 --------IVDVYCKCENMNYAESML-LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
I++ Y K ++ AE++ +K + + S +SMI GY G++ A F
Sbjct: 366 FDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQK 425
Query: 351 LTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHP 410
L +K+ V WT + SG V+ + LLS+ V + G+ +LL + + L
Sbjct: 426 LHDKDGVTWTVMISGLVQNELFAEAASLLSDMV-RCGLKPLNSTYSVLLSSAGATSNLDQ 484
Query: 411 GKEIHAYILRMGVQMDKKLI--STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACY 468
GK IH I + D LI ++LV MY+KCG + A IF +++D V +N MI
Sbjct: 485 GKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGL 544
Query: 469 AHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPE 528
+HHG +KA+ LF+EML+ G KP++VTF+ +LSA H G + G + F +M Y I P
Sbjct: 545 SHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPG 604
Query: 529 TDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLN-RNAELAGEAEE-- 585
DHY MIDL GRA +L++A EF+ ++P D + G+ L +C LN R+ + G AE
Sbjct: 605 IDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAA 664
Query: 586 -KLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKG-NRFAGCSWVYVEHEIHI 643
+LL L+ N +V L NVYA G +RK+M G+KG + GCSWV V ++
Sbjct: 665 MRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEM-GIKGVKKTPGCSWVVVNGRANV 723
Query: 644 FTVGDVSHPKTNAIYSVLAIFTG 666
F GD S + A VL IF G
Sbjct: 724 FLSGDKS--ASEAAQMVLPIFCG 744
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 293 bits (749), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 192/651 (29%), Positives = 307/651 (47%), Gaps = 101/651 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H +K GL L+ +YSK ++ E+ +F + ++ + WN +++A +
Sbjct: 295 HCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAE---- 350
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
N GY A L F+ +S + D FT+++ +
Sbjct: 351 --------------------------NDYGYSALDLFGFMRQKS----VLPDSFTLSNVI 380
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C L +G+ +HA + K ++ S+L+ +YSKC C +A VF+ E+
Sbjct: 381 SCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEK--- 437
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRM-- 250
D V+W +LISG +NG +E LK+F M
Sbjct: 438 ------------------------------DMVAWGSLISGLCKNGKFKEALKVFGDMKD 467
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
++ ++ + S +AC GL ++ ++H ++K GL+ N FV S ++D+Y KC
Sbjct: 468 DDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKC--- 524
Query: 311 NYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQ 370
G E A + F S++ +N+V W ++ S Y +
Sbjct: 525 ----------------------------GLPEMALKVFTSMSTENMVAWNSMISCYSRNN 556
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLI 430
E DL + + +G+ D++ + +L A + A+L GK +H Y LR+G+ D L
Sbjct: 557 LPELSIDLFN-LMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLK 615
Query: 431 STLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
+ L+DMY KCG YAE IF+ + L+ +N+MI Y HG A+ LF+EM + G
Sbjct: 616 NALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGES 675
Query: 491 PDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIE 550
PD VTF++++SA H G VE G+ F M DY I P +HYA M+DL GRA LE+A
Sbjct: 676 PDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYS 735
Query: 551 FMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGN 610
F+K++P E D+ I L+ R + N EL + EKLLR+E + YVQL N+Y G
Sbjct: 736 FIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGL 795
Query: 611 WAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
E ++ M+ ++ GCSW+ V ++F G S P I++VL
Sbjct: 796 KNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVL 846
Score = 142 bits (358), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 118/454 (25%), Positives = 204/454 (44%), Gaps = 70/454 (15%)
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
FT S L C L N+ +G+ +H +V F +SL++MY KC + A +VF+G
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
++ + +S D WN++I GY + +EG+
Sbjct: 121 WSQSQSGVSAR--------------------------DVTVWNSMIDGYFKFRRFKEGVG 154
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKC--AKEIHSWVLKNGLISNPFVSSGIVDV 303
F RM GVR + + + +S C N + K+IH ++L+N L ++ F+ + ++D+
Sbjct: 155 CFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDM 214
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK-NVVVWTAL 362
Y K G S+ +A R F + +K NVV+W +
Sbjct: 215 YFK--------------------------FGLSI-----DAWRVFVEIEDKSNVVLWNVM 243
Query: 363 FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMG 422
G+ + CE+ DL V + LGAC+ G++IH +++MG
Sbjct: 244 IVGFGGSGICESSLDLY-MLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMG 302
Query: 423 VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFE 482
+ D + ++L+ MYSKCG + AE +F +++ L ++N M+A YA + + A+ LF
Sbjct: 303 LHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFG 362
Query: 483 EMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADY---KISPETDHYACMIDLY 539
M +K + PD+ T ++S C SV Y S+ A+ I + + ++ LY
Sbjct: 363 FMRQKSVLPDSFTLSNVIS----CCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLY 418
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLN-VCR 572
+ A KS+ E+D V GS ++ +C+
Sbjct: 419 SKCGCDPDAYLVFKSM-EEKDMVAWGSLISGLCK 451
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 123/563 (21%), Positives = 229/563 (40%), Gaps = 106/563 (18%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPE-------RNVF 57
NL H + G L+++Y K L + ++FD + R+V
Sbjct: 75 NLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVT 134
Query: 58 SWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSA 117
WN++I K K+ F ML + + + +L + + +
Sbjct: 135 VWNSMIDGYFKFRRFKEGVGCF-----------RRMLVFGVRPDAF---SLSIVVSVMCK 180
Query: 118 DEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYE 177
+ + R +E G+Q+H FM++ S D F ++LIDMY K
Sbjct: 181 EGNFRREE------------------GKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSI 222
Query: 178 EACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQN 237
+A RVF ++ N+ V WN +I G+ +
Sbjct: 223 DAWRVFVEIEDKSNV--------------------------------VLWNVMIVGFGGS 250
Query: 238 GDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVS 297
G E L L++ N V+ +F AL AC N ++IH V+K GL ++P+V
Sbjct: 251 GICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVC 310
Query: 298 SGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVV 357
+ ++ +Y KC G + EA F + +K +
Sbjct: 311 TSLLSMYSKC-------------------------------GMVGEAETVFSCVVDKRLE 339
Query: 358 VWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAY 417
+W A+ + Y + + DL F+ ++ V+ D+ L ++ C++ + GK +HA
Sbjct: 340 IWNAMVAAYAENDYGYSALDLFG-FMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAE 398
Query: 418 ILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKA 477
+ + +Q + S L+ +YSKCG A ++F++ E+D+V + +I+ +G ++A
Sbjct: 399 LFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEA 458
Query: 478 ILLFEEML--EKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACM 535
+ +F +M + +KPD+ ++ +A ++ G + SM + + +
Sbjct: 459 LKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT-GLVLNVFVGSSL 517
Query: 536 IDLYGRANQLEKAIEFMKSIPTE 558
IDLY + E A++ S+ TE
Sbjct: 518 IDLYSKCGLPEMALKVFTSMSTE 540
Score = 89.4 bits (220), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 130/302 (43%), Gaps = 40/302 (13%)
Query: 226 SWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNE-HTFASALSACCGLRNVKCAKEIHSW 284
S N+ I +Q G+ + L L+ + + W TF S L AC L N+ K IH
Sbjct: 26 SINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 285 VLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEA 344
V+ G +PF+++ +V++Y KC ++YA + + G S S
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYA--VQVFDGWSQSQS----------------- 126
Query: 345 RRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACAL 404
++ ++V VW ++ GY K + + + GV DA L I++
Sbjct: 127 -----GVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLV-FGVRPDAFSLSIVVSVMCK 180
Query: 405 QAALH--PGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER-DLVLY 461
+ GK+IH ++LR + D L + L+DMY K G A +F ++ ++VL+
Sbjct: 181 EGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLW 240
Query: 462 NVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR-----------HCGSVE 510
NVMI + G E ++ L+ +K + +F L A HC V+
Sbjct: 241 NVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVK 300
Query: 511 MG 512
MG
Sbjct: 301 MG 302
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 103/264 (39%), Gaps = 67/264 (25%)
Query: 6 LKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISA 65
L+ L H IK GL L + LI +YSK L + K+F M N+ +WN++IS
Sbjct: 492 LRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMIS- 550
Query: 66 CIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDE 125
C ++L P + +N ML + I D
Sbjct: 551 CYSRNNL----------PELSIDLFNLML-----------------------SQGIFPDS 577
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
++TS L ++ G+ LH + ++ + ++LIDMY KC + A +F+
Sbjct: 578 VSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFK- 636
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
+M K+ ++WN +I GY +GD L
Sbjct: 637 -----------------------KMQHKSL---------ITWNLMIYGYGSHGDCITALS 664
Query: 246 LFVRMGENGVRWNEHTFASALSAC 269
LF M + G ++ TF S +SAC
Sbjct: 665 LFDEMKKAGESPDDVTFLSLISAC 688
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 293 bits (749), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 165/483 (34%), Positives = 258/483 (53%), Gaps = 45/483 (9%)
Query: 178 EACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQN 237
EA ++F+ E + S N M++ R E A F R P DA SWNT+I+GY +
Sbjct: 111 EAHQLFDEIPEP-DTFSYNIMLSCYVRNVNFEKAQSFFDRMP-FKDAASWNTMITGYARR 168
Query: 238 GDAEEGLKLFVRMGE-NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFV 296
G+ E+ +LF M E N V WN
Sbjct: 169 GEMEKARELFYSMMEKNEVSWN-------------------------------------- 190
Query: 297 SSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT-EKN 355
++ Y +C ++ A + VR + ++MI GY +E A F +T KN
Sbjct: 191 --AMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKN 248
Query: 356 VVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIH 415
+V W A+ SGYV+ E L + +EG+ ++ L L C+ +AL G++IH
Sbjct: 249 LVTWNAMISGYVENSRPEDGLKLFRAML-EEGIRPNSSGLSSALLGCSELSALQLGRQIH 307
Query: 416 AYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEE 475
+ + + D +++L+ MY KCG + A +F+ ++D+V +N MI+ YA HG+ +
Sbjct: 308 QIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNAD 367
Query: 476 KAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACM 535
KA+ LF EM++ I+PD +TFVA+L A H G V +G YF SM DYK+ P+ DHY CM
Sbjct: 368 KALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCM 427
Query: 536 IDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNK 595
+DL GRA +LE+A++ ++S+P A + G+ L CR+++N ELA A EKLL+L N
Sbjct: 428 VDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNA 487
Query: 596 ARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTN 655
A YVQLAN+YA++ W ++ R+RK+M+ + G SW+ + +++H F D HP+ +
Sbjct: 488 AGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELD 547
Query: 656 AIY 658
+I+
Sbjct: 548 SIH 550
Score = 130 bits (327), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 154/321 (47%), Gaps = 44/321 (13%)
Query: 25 TITTNQL-IHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP 83
TIT N L I I + + E+ +LFDE+PE + FS+N ++S +++ + ++A+S FD P
Sbjct: 92 TITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMP 151
Query: 84 HKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGF 143
KD ++N+M+ GY G A +LF M +E
Sbjct: 152 FKDAASWNTMITGYAR-RGEMEKARELFYSMMEKNE------------------------ 186
Query: 144 GRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACC 203
+ +++I Y +C E+A F+ +++ AM+
Sbjct: 187 -----------------VSWNAMISGYIECGDLEKASHFFK-VAPVRGVVAWTAMITGYM 228
Query: 204 REGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFA 263
+ ++E+A F + V+WN +ISGYV+N E+GLKLF M E G+R N +
Sbjct: 229 KAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLS 288
Query: 264 SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVR 323
SAL C L ++ ++IH V K+ L ++ + ++ +YCKC + A + + +
Sbjct: 289 SALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKK 348
Query: 324 NSFSISSMIVGYSLQGNMEEA 344
+ + ++MI GY+ GN ++A
Sbjct: 349 DVVAWNAMISGYAQHGNADKA 369
Score = 106 bits (264), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 135/286 (47%), Gaps = 74/286 (25%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSP----- 83
N +I Y++ + ++R+LF M E+N SWN +IS I+ DL++A F +P
Sbjct: 159 NTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVV 218
Query: 84 ---------------------------HKDLVTYNSMLCGYINAEGYEADALKLFIEMQS 116
+K+LVT+N+M+ GY+ E D LKLF M
Sbjct: 219 AWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPE-DGLKLFRAM-- 275
Query: 117 ADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTS--NDASGFAVSSLIDMYSKCR 174
+E IR + ++S L C +L + GRQ+H + K++ ND + A++SLI MY KC
Sbjct: 276 LEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVT--ALTSLISMYCKCG 333
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
+A ++FE ++ K +VA WN +ISGY
Sbjct: 334 ELGDAWKLFE-------VMKKKDVVA--------------------------WNAMISGY 360
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC--CGLRNVKCA 278
Q+G+A++ L LF M +N +R + TF + L AC GL N+ A
Sbjct: 361 AQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMA 406
Score = 37.0 bits (84), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 95/240 (39%), Gaps = 47/240 (19%)
Query: 23 LTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSS 82
+T +T+ LI +Y K L ++ KLF+ M +++V +WN +IS
Sbjct: 319 VTALTS--LISMYCKCGELGDAWKLFEVMKKKDVVAWNAMIS------------------ 358
Query: 83 PHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLC--VKLLN 140
GY G AL LF EM D IR D T + L C L+N
Sbjct: 359 -------------GYAQ-HGNADKALCLFREM--IDNKIRPDWITFVAVLLACNHAGLVN 402
Query: 141 VG---FGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNA 197
+G F + + V+ D + ++D+ + EEA ++ +
Sbjct: 403 IGMAYFESMVRDYKVEPQPD----HYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGT 458
Query: 198 MVAACCREGEMEMALKTFWRQPELN--DAVSWNTLISGYVQNGDAEEGLKLFVRMGENGV 255
++ AC +E+A + +LN +A + L + Y E+ ++ RM E+ V
Sbjct: 459 LLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNV 518
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 292 bits (747), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 194/653 (29%), Positives = 315/653 (48%), Gaps = 72/653 (11%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H Q I+ +L+ + + +I IY+ LL E+ LF + V +W ++I C
Sbjct: 28 HAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIR-CFTD--- 82
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+SLF + AL F+EM+++ D S L
Sbjct: 83 ---QSLF-------------------------SKALASFVEMRASGRC--PDHNVFPSVL 112
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC---RVFEGCTEE 189
C ++++ FG +H F+V+ D + ++L++MY+K VF+ +
Sbjct: 113 KSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQR 172
Query: 190 V-NLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFV 248
N ++ C ++ + F P D VS+NT+I+GY Q+G E+ L++
Sbjct: 173 TSNSGDEDVKAETCIMPFGIDSVRRVFEVMPR-KDVVSYNTIIAGYAQSGMYEDALRMVR 231
Query: 249 RMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCE 308
MG ++ + T +S L +V KEIH +V++ G+ S+ ++ S +VD+Y K
Sbjct: 232 EMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAK-- 289
Query: 309 NMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK 368
+E++ R F L ++ + W +L +GYV+
Sbjct: 290 -----------------------------SARIEDSERVFSRLYCRDGISWNSLVAGYVQ 320
Query: 369 AQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKK 428
L + VT + V A+ ++ ACA A LH GK++H Y+LR G +
Sbjct: 321 NGRYNEALRLFRQMVTAK-VKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIF 379
Query: 429 LISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG 488
+ S LVDMYSKCGN+ A IF D V + +I +A HGH +A+ LFEEM +G
Sbjct: 380 IASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQG 439
Query: 489 IKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKA 548
+KP+ V FVA+L+A H G V+ YFNSMT Y ++ E +HYA + DL GRA +LE+A
Sbjct: 440 VKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEA 499
Query: 549 IEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAE 608
F+ + E + + L+ C +++N ELA + EK+ ++ N YV + N+YA+
Sbjct: 500 YNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASN 559
Query: 609 GNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
G W EM ++R +MR + CSW+ ++++ H F GD SHP + I L
Sbjct: 560 GRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFL 612
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 292 bits (747), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 178/609 (29%), Positives = 302/609 (49%), Gaps = 72/609 (11%)
Query: 55 NVFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
++F+ + + K + +AR +FD P +DLV++N+++ GY + G AL++ M
Sbjct: 169 DLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGY-SQNGMARMALEMVKSM 227
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
+E+++ T+ S L L + G+++H + +++ D+ ++L+DMY+KC
Sbjct: 228 --CEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCG 285
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
E A ++F+G E + VSWN++I Y
Sbjct: 286 SLETARQLFDGMLER---------------------------------NVVSWNSMIDAY 312
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
VQN + +E + +F +M + GV+ + + AL AC L +++ + IH ++ GL N
Sbjct: 313 VQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNV 372
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
V + ++ +YCKC+ ++ A SM F L +
Sbjct: 373 SVVNSLISMYCKCKEVDTAASM-------------------------------FGKLQSR 401
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEF--VTKEGVVTDALILVILLGACALQAALHPGK 412
+V W A+ G+ AQN + D L+ F + V D V ++ A A + H K
Sbjct: 402 TLVSWNAMILGF--AQNGRPI-DALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAK 458
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
IH ++R + + + + LVDMY+KCG + A +IF ER + +N MI Y HG
Sbjct: 459 WIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHG 518
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
+ A+ LFEEM + IKP+ VTF++++SA H G VE G K F M +Y I DHY
Sbjct: 519 FGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHY 578
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
M+DL GRA +L +A +F+ +P + + G+ L C++++N A +A E+L L
Sbjct: 579 GAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNP 638
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
++ +V LAN+Y A W ++G++R M + GCS V +++E+H F G +HP
Sbjct: 639 DDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHP 698
Query: 653 KTNAIYSVL 661
+ IY+ L
Sbjct: 699 DSKKIYAFL 707
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 288 bits (738), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 197/667 (29%), Positives = 319/667 (47%), Gaps = 74/667 (11%)
Query: 3 SLNLKEALICHVQAIKA-----GLTLTTITTNQLIHI--YSKHNLLRESRKLFDEMPERN 55
SL K L+ H++ I+A GL L +++LI S+ L S K+ + N
Sbjct: 58 SLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPN 117
Query: 56 VFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQ 115
+FSWN I +S + P + + Y ML +
Sbjct: 118 IFSWNVTIRGFSESEN-----------PKESFLLYKQML--------------------R 146
Query: 116 SADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRC 175
R D FT +C L G + ++K + ++ I M++ C
Sbjct: 147 HGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASC-- 204
Query: 176 YEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYV 235
G+ME A K F P + D VSWN LI+GY
Sbjct: 205 ------------------------------GDMENARKVFDESP-VRDLVSWNCLINGYK 233
Query: 236 QNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL-ISNP 294
+ G+AE+ + ++ M GV+ ++ T +S+C L ++ KE + +V +NGL ++ P
Sbjct: 234 KIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIP 293
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
V++ ++D++ KC +++ A + R S ++MI GY+ G ++ +R+ FD + EK
Sbjct: 294 LVNA-LMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEK 352
Query: 355 NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI 414
+VV+W A+ G V+A+ + L E T D + ++ L AC+ AL G I
Sbjct: 353 DVVLWNAMIGGSVQAKRGQDALALFQEMQTSN-TKPDEITMIHCLSACSQLGALDVGIWI 411
Query: 415 HAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHE 474
H YI + + ++ L ++LVDMY+KCGN++ A +F R+ + Y +I A HG
Sbjct: 412 HRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDA 471
Query: 475 EKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYAC 534
AI F EM++ GI PD +TF+ +LSA H G ++ G YF+ M + + ++P+ HY+
Sbjct: 472 STAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSI 531
Query: 535 MIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNN 594
M+DL GRA LE+A M+S+P E DA + G+ L CR++ N EL +A +KLL L+ ++
Sbjct: 532 MVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSD 591
Query: 595 KARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKT 654
YV L +Y W + R R+ M + GCS + V + F V D S P++
Sbjct: 592 SGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPES 651
Query: 655 NAIYSVL 661
IY L
Sbjct: 652 EKIYDRL 658
Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 130/549 (23%), Positives = 232/549 (42%), Gaps = 107/549 (19%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
+R +L ++ HV +K L L + N IH+++ + +RK+FDE P R++ SWN
Sbjct: 169 LRLSSLGHMILGHV--LKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWN 226
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
+I+ GY G A+ ++ M+S E
Sbjct: 227 CLIN-------------------------------GYKKI-GEAEKAIYVYKLMES--EG 252
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
++ D+ T+ ++ C L ++ G++ + ++ + + V++L+DM+SKC EA
Sbjct: 253 VKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEAR 312
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
R+F+ E+ ++S M++ R G ++++ K F E D V WN +I G VQ
Sbjct: 313 RIFDN-LEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEE-KDVVLWNAMIGGSVQAKRG 370
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGI 300
++ L LF M + + +E T LSAC L + IH ++ K L N + + +
Sbjct: 371 QDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSL 430
Query: 301 VDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWT 360
VD+Y KC N++ A S+ RNS + +++I G +L G+ A +F+ + +
Sbjct: 431 VDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDA------ 484
Query: 361 ALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILR 420
G+ D + + LL AC + G++ Y +
Sbjct: 485 --------------------------GIAPDEITFIGLLSACCHGGMIQTGRD---YFSQ 515
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
M + + + L Y++M+ G E+A L
Sbjct: 516 MKSRFN---------------------------LNPQLKHYSIMVDLLGRAGLLEEADRL 548
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMID-LY 539
E M ++ DA + A+L R G+VE+GEK + ++ P ++D +Y
Sbjct: 549 MESM---PMEADAAVWGALLFGCRMHGNVELGEKAAKKL---LELDPSDSGIYVLLDGMY 602
Query: 540 GRANQLEKA 548
G AN E A
Sbjct: 603 GEANMWEDA 611
Score = 87.0 bits (214), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 125/276 (45%), Gaps = 45/276 (16%)
Query: 252 ENGVRWNE-HTFA------SALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVY 304
+ + WN H+F S L C L ++K +I + ++ NGLI +PF SS ++ +
Sbjct: 39 DKPINWNSTHSFVLHNPLLSLLEKCKLLLHLK---QIQAQMIINGLILDPFASSRLI-AF 94
Query: 305 CKCENMNYAE-SMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
C Y + S+ +LKG+ N N+ W
Sbjct: 95 CALSESRYLDYSVKILKGIENP-----------------------------NIFSWNVTI 125
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVV---TDALILVILLGACALQAALHPGKEIHAYILR 420
G+ +++N + F LL + + + G D +L CA G I ++L+
Sbjct: 126 RGFSESENPKESF-LLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLK 184
Query: 421 MGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILL 480
+ +++ + + + M++ CG+M A +F RDLV +N +I Y G EKAI +
Sbjct: 185 LRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYV 244
Query: 481 FEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYF 516
++ M +G+KPD VT + ++S+ G + G++++
Sbjct: 245 YKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFY 280
Score = 39.7 bits (91), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 103/259 (39%), Gaps = 19/259 (7%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIY-SKHNLLRESRKLFDEMPERNVFSW 59
M++ N K I + + A L + IH Y K++L NV
Sbjct: 380 MQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSL------------SLNVALG 427
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
+++ K ++ +A S+F ++ +TY +++ G + G + A+ F EM D
Sbjct: 428 TSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGG-LALHGDASTAISYFNEM--IDA 484
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSN-DASGFAVSSLIDMYSKCRCYEE 178
I DE T L+ C + GR + M N + S ++D+ + EE
Sbjct: 485 GIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEE 544
Query: 179 ACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSW-NTLISGYVQN 237
A R+ E E + A++ C G +E+ K + EL+ + S L+ G
Sbjct: 545 ADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGE 604
Query: 238 GDAEEGLKLFVR-MGENGV 255
+ E K R M E GV
Sbjct: 605 ANMWEDAKRARRMMNERGV 623
>sp|Q9C866|PPR65_ARATH Pentatricopeptide repeat-containing protein At1g31430
OS=Arabidopsis thaliana GN=PCMP-E55 PE=2 SV=1
Length = 570
Score = 287 bits (735), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 187/581 (32%), Positives = 305/581 (52%), Gaps = 44/581 (7%)
Query: 87 LVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQ 146
L+ YN ML + + + L LF E++ + + D FT+ L +L V G +
Sbjct: 11 LLMYNKMLKSLADGKSF-TKVLALFGELRG--QGLYPDNFTLPVVLKSIGRLRKVIEGEK 67
Query: 147 LHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREG 206
+H + VK + + +SL+ MY+ G
Sbjct: 68 VHGYAVKAGLEFDSYVSNSLMGMYASL--------------------------------G 95
Query: 207 EMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMG-ENGVRWNEHTFASA 265
++E+ K F P+ D VSWN LIS YV NG E+ + +F RM E+ ++++E T S
Sbjct: 96 KIEITHKVFDEMPQ-RDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVST 154
Query: 266 LSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNS 325
LSAC L+N++ + I+ +V+ +S + + +VD++CKC ++ A ++ +N
Sbjct: 155 LSACSALKNLEIGERIYRFVVTEFEMSVR-IGNALVDMFCKCGCLDKARAVFDSMRDKNV 213
Query: 326 FSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTK 385
+SM+ GY G ++EAR F+ K+VV+WTA+ +GYV+ + +L T
Sbjct: 214 KCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTA 273
Query: 386 EGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTY 445
G+ D +LV LL CA AL GK IH YI V +DK + + LVDMY+KCG +
Sbjct: 274 -GIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIET 332
Query: 446 AEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRH 505
A +F ERD + +I A +G +A+ L+ EM G++ DA+TFVA+L+A H
Sbjct: 333 ALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNH 392
Query: 506 CGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILG 565
G V G K F+SMT + + P+++H +C+IDL RA L++A E + + E D ++
Sbjct: 393 GGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVP 452
Query: 566 ---SFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMR 622
S L+ R N ++A EKL ++E ++ + + LA+VYA+ W ++ +R++M+
Sbjct: 453 VYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMK 512
Query: 623 GMKGNRFAGCSWVYVEHEIHIFTVGD--VSHPKTNAIYSVL 661
+ +F GCS + ++ H F VGD +SHPK + I S+L
Sbjct: 513 DLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSML 553
Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 195/436 (44%), Gaps = 69/436 (15%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H A+KAGL + +N L+ +Y+ + + K+FDEMP
Sbjct: 69 HGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMP-------------------- 108
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
+D+V++N ++ Y+ +E DA+ +F M S + +++ DE T+ STL
Sbjct: 109 -----------QRDVVSWNGLISSYVGNGRFE-DAIGVFKRM-SQESNLKFDEGTIVSTL 155
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
+ C L N+ G +++ F+V T + S ++L+DM+ KC C ++A VF+ ++ N+
Sbjct: 156 SACSALKNLEIGERIYRFVV-TEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDK-NV 213
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGE 252
+MV G ++ A F R P + D V W +++GYVQ +E L+LF M
Sbjct: 214 KCWTSMVFGYVSTGRIDEARVLFERSP-VKDVVLWTAMMNGYVQFNRFDEALELFRCMQT 272
Query: 253 NGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNY 312
G+R + S L+ C ++ K IH ++ +N + + V + +VD+Y KC
Sbjct: 273 AGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKC----- 327
Query: 313 AESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNC 372
G +E A F + E++ WT+L G
Sbjct: 328 --------------------------GCIETALEVFYEIKERDTASWTSLIYGLAMNGMS 361
Query: 373 EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEI-HAYILRMGVQMDKKLIS 431
DL E + GV DA+ V +L AC + G++I H+ R VQ + S
Sbjct: 362 GRALDLYYE-MENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCS 420
Query: 432 TLVDMYSKCGNMTYAE 447
L+D+ + G + AE
Sbjct: 421 CLIDLLCRAGLLDEAE 436
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 287 bits (735), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 183/649 (28%), Positives = 314/649 (48%), Gaps = 81/649 (12%)
Query: 16 AIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQA 75
A+KA L + ++IH + K ++ S +++ +++I IK + +A
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDVTLGS----------DLYVGSSLIYMYIKCGRMIEA 115
Query: 76 RSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLC 135
+FD D+VT++SM+ G+ G A++ F M A + + D T+ + ++ C
Sbjct: 116 LRMFDELEKPDIVTWSSMVSGF-EKNGSPYQAVEFFRRMVMASD-VTPDRVTLITLVSAC 173
Query: 136 VKLLNVGFGRQLHAFMVKT--SNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLI 193
KL N GR +H F+++ SND S V+SL++ Y+K R ++EA +F+ E+
Sbjct: 174 TKLSNSRLGRCVHGFVIRRGFSNDLS--LVNSLLNCYAKSRAFKEAVNLFKMIAEK---- 227
Query: 194 SKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGEN 253
D +SW+T+I+ YVQNG A E L +F M ++
Sbjct: 228 -----------------------------DVISWSTVIACYVQNGAAAEALLVFNDMMDD 258
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA 313
G N T L AC +++ ++ H ++ GL + VS+ +VD+Y KC
Sbjct: 259 GTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKC------ 312
Query: 314 ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE 373
FS EEA F + K+VV W AL SG+
Sbjct: 313 ------------FS-------------PEEAYAVFSRIPRKDVVSWVALISGFTLNGMAH 347
Query: 374 ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL 433
+ S + + DA+++V +LG+C+ L K H+Y+++ G + + ++L
Sbjct: 348 RSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASL 407
Query: 434 VDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKG-IKPD 492
V++YS+CG++ A +F +D V++ +I Y HG KA+ F M++ +KP+
Sbjct: 408 VELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPN 467
Query: 493 AVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFM 552
VTF++ILSA H G + G + F M DY+++P +HYA ++DL GR L+ AIE
Sbjct: 468 EVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEIT 527
Query: 553 KSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWA 612
K +P ILG+ L CR+++N E+A +KL LE N+ Y+ ++NVY +G W
Sbjct: 528 KRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWE 587
Query: 613 EMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+ ++R ++ + S + + ++H F D HP+ +Y +L
Sbjct: 588 NVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLL 636
Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/418 (25%), Positives = 185/418 (44%), Gaps = 46/418 (11%)
Query: 227 WNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVL 286
WNTL+ + EE L F M + + + T AL AC LR V + IH +V
Sbjct: 28 WNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIHGFVK 87
Query: 287 KN-GLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEAR 345
K+ L S+ +V S ++ +Y KC G M EA
Sbjct: 88 KDVTLGSDLYVGSSLIYMYIKC-------------------------------GRMIEAL 116
Query: 346 RHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQ 405
R FD L + ++V W+++ SG+ K + + V V D + L+ L+ AC
Sbjct: 117 RMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKL 176
Query: 406 AALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMI 465
+ G+ +H +++R G D L+++L++ Y+K A +F+ E+D++ ++ +I
Sbjct: 177 SNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVI 236
Query: 466 ACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKI 525
ACY +G +A+L+F +M++ G +P+ T + +L A +E G K + + +
Sbjct: 237 ACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKT-HELAIRKGL 295
Query: 526 SPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEE 585
E ++D+Y + E+A IP +D V + ++ LN A + E E
Sbjct: 296 ETEVKVSTALVDMYMKCFSPEEAYAVFSRIP-RKDVVSWVALISGFTLNGMAHRSIE-EF 353
Query: 586 KLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQ--------MRGMKGNRFAGCSWV 635
++ LE N + + + V G+ +E+G + + G N F G S V
Sbjct: 354 SIMLLENNTRPDAILMVKVL---GSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLV 408
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/469 (23%), Positives = 189/469 (40%), Gaps = 108/469 (23%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
H I+ G + N L++ Y+K +E+ LF + E++V SW+T+I+ +++
Sbjct: 186 HGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQN--- 242
Query: 73 KQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTL 132
G A+AL +F +M D+ + TV L
Sbjct: 243 -----------------------------GAAAEALLVFNDMM--DDGTEPNVATVLCVL 271
Query: 133 NLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNL 192
C ++ GR+ H ++ + ++L+DMY KC EEA VF
Sbjct: 272 QACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFS-------- 323
Query: 193 ISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF-VRMG 251
R P D VSW LISG+ NG A ++ F + +
Sbjct: 324 ------------------------RIPR-KDVVSWVALISGFTLNGMAHRSIEEFSIMLL 358
Query: 252 ENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMN 311
EN R + L +C L ++ AK HS+V+K G SNPF+ + +V++Y +C
Sbjct: 359 ENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRC---- 414
Query: 312 YAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY-VKAQ 370
G++ A + F+ + K+ VVWT+L +GY + +
Sbjct: 415 ---------------------------GSLGNASKVFNGIALKDTVVWTSLITGYGIHGK 447
Query: 371 NCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL---RMGVQMDK 427
+AL + + V V + + + +L AC+ +H G I ++ R+ ++
Sbjct: 448 GTKAL-ETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEH 506
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQN--FIERDLVLYNVMIACYAHHGHE 474
+ LVD+ + G++ A I + F +L ++ AC H E
Sbjct: 507 --YAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGE 553
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 286 bits (732), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 180/608 (29%), Positives = 299/608 (49%), Gaps = 79/608 (12%)
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+++ +K AR +FD +D V+YN+M+CGY+ E E +++++F+E +
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVE-ESVRMFLENL---DQF 303
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS-----LIDMYSKCRCY 176
+ D TV+S L C L ++ + ++ +M+K +GF + S LID+Y+KC
Sbjct: 304 KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLK-----AGFVLESTVRNILIDVYAKC--- 355
Query: 177 EEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQ 236
G+M A F E D VSWN++ISGY+Q
Sbjct: 356 -----------------------------GDMITARDVF-NSMECKDTVSWNSIISGYIQ 385
Query: 237 NGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFV 296
+GD E +KLF M + + T+ +S L ++K K +HS +K+G+ + V
Sbjct: 386 SGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSV 445
Query: 297 SSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNV 356
S+ ++D+Y KC G + ++ + F S+ +
Sbjct: 446 SNALIDMYAKC-------------------------------GEVGDSLKIFSSMGTGDT 474
Query: 357 VVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHA 416
V W + S V+ + + ++ + K VV D ++ L CA AA GKEIH
Sbjct: 475 VTWNTVISACVRFGDFATGLQVTTQ-MRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHC 533
Query: 417 YILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEK 476
+LR G + + ++ + L++MYSKCG + + +F+ RD+V + MI Y +G EK
Sbjct: 534 CLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEK 593
Query: 477 AILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMI 536
A+ F +M + GI PD+V F+AI+ A H G V+ G F M YKI P +HYAC++
Sbjct: 594 ALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVV 653
Query: 537 DLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKA 596
DL R+ ++ KA EF++++P + DA I S L CR + + E A +++ L ++
Sbjct: 654 DLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPG 713
Query: 597 RYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNA 656
+ +N YAA W ++ IRK ++ + G SW+ V +H+F+ GD S P++ A
Sbjct: 714 YSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEA 773
Query: 657 IYSVLAIF 664
IY L I
Sbjct: 774 IYKSLEIL 781
Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 134/570 (23%), Positives = 241/570 (42%), Gaps = 103/570 (18%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEM-PERNVFSWNT 61
S NL E H I GL + + +LI YS S +F + P +NV+ WN+
Sbjct: 17 SSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNS 76
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
II A K+ G +AL+ + +++ + +
Sbjct: 77 IIRAFSKN--------------------------------GLFPEALEFYGKLR--ESKV 102
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
D++T S + C L + G ++ ++ ++ F ++L+DMYS+ A +
Sbjct: 103 SPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQ 162
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
VF+ EM ++ D VSWN+LISGY +G E
Sbjct: 163 VFD------------------------EMPVR---------DLVSWNSLISGYSSHGYYE 189
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E L+++ + + + + T +S L A L VK + +H + LK+G+ S V++G+V
Sbjct: 190 EALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLV 249
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
+Y K A + VR+S S ++MI GY +EE+ R F
Sbjct: 250 AMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF------------- 296
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+ L +F D L + +L AC L K I+ Y+L+
Sbjct: 297 --------------LENLDQF------KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKA 336
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLF 481
G ++ + + L+D+Y+KCG+M A +F + +D V +N +I+ Y G +A+ LF
Sbjct: 337 GFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLF 396
Query: 482 EEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGR 541
+ M+ + D +T++ ++S ++ G K +S I + +ID+Y +
Sbjct: 397 KMMMIMEEQADHITYLMLISVSTRLADLKFG-KGLHSNGIKSGICIDLSVSNALIDMYAK 455
Query: 542 ANQLEKAIEFMKSIPTEEDAVILGSFLNVC 571
++ +++ S+ T D V + ++ C
Sbjct: 456 CGEVGDSLKIFSSMGT-GDTVTWNTVISAC 484
Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 75/162 (46%), Gaps = 6/162 (3%)
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIE-RDLV 459
A + + L+ + IHA ++ +G+ L+D YS + +F+ +++
Sbjct: 13 ALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVY 72
Query: 460 LYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSM 519
L+N +I ++ +G +A+ + ++ E + PD TF +++ A EMG+ + +
Sbjct: 73 LWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQI 132
Query: 520 TADYKISPETDHYA--CMIDLYGRANQLEKAIEFMKSIPTEE 559
+ E+D + ++D+Y R L +A + +P +
Sbjct: 133 ---LDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRD 171
>sp|Q9LYU9|PP378_ARATH Pentatricopeptide repeat-containing protein At5g13270,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2
SV=1
Length = 752
Score = 285 bits (730), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 190/653 (29%), Positives = 307/653 (47%), Gaps = 71/653 (10%)
Query: 18 KAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEM----PERNVFSWNTIISACIKSHDLK 73
KAG+++++ + L + L R L D M +V N ++ + L+
Sbjct: 76 KAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLE 135
Query: 74 QARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLN 133
A LFD + V+ +M+ Y +G A+ LF M ++ + + T+ L
Sbjct: 136 DADKLFDEMSELNAVSRTTMISAYAE-QGILDKAVGLFSGMLASGD--KPPSSMYTTLLK 192
Query: 134 LCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLI 193
V + FGRQ+HA +++ ++ + +++MY KC A RVF+
Sbjct: 193 SLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFD--------- 243
Query: 194 SKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGEN 253
+MA+K V+ L+ GY Q G A + LKLFV +
Sbjct: 244 ---------------QMAVKK---------PVACTGLMVGYTQAGRARDALKLFVDLVTE 279
Query: 254 GVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYA 313
GV W+ F+ L AC L + K+IH+ V K GL S V + +VD Y KC
Sbjct: 280 GVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKC------ 333
Query: 314 ESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCE 373
+ E A R F + E N V W+A+ SGY + E
Sbjct: 334 -------------------------SSFESACRAFQEIREPNDVSWSAIISGYCQMSQFE 368
Query: 374 ALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTL 433
+K + ++ + AC++ A + G ++HA ++ + + S L
Sbjct: 369 EAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESAL 428
Query: 434 VDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDA 493
+ MYSKCG + A +F++ D+V + I+ +A++G+ +A+ LFE+M+ G+KP++
Sbjct: 429 ITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNS 488
Query: 494 VTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMK 553
VTF+A+L+A H G VE G+ ++M Y ++P DHY CMID+Y R+ L++A++FMK
Sbjct: 489 VTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMK 548
Query: 554 SIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAE 613
++P E DA+ FL+ C ++N EL A E+L +L+ + A YV N+Y G W E
Sbjct: 549 NMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEE 608
Query: 614 MGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTG 666
+ K M + CSW+ + +IH F VGD HP+T IY L F G
Sbjct: 609 AAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEFDG 661
Score = 122 bits (307), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 113/465 (24%), Positives = 197/465 (42%), Gaps = 70/465 (15%)
Query: 106 DALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSS 165
+A + EM A + + ++ C +L ++ GR LH M + S +
Sbjct: 66 EAFEFLQEMDKAG--VSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNC 123
Query: 166 LIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAV 225
++ MY +CR E+A ++F+ EM+ ELN AV
Sbjct: 124 VLQMYCECRSLEDADKLFD------------------------EMS--------ELN-AV 150
Query: 226 SWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWV 285
S T+IS Y + G ++ + LF M +G + + + L + R + ++IH+ V
Sbjct: 151 SRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHV 210
Query: 286 LKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEAR 345
++ GL SN + +GIV++Y KC G + A+
Sbjct: 211 IRAGLCSNTSIETGIVNMYVKC-------------------------------GWLVGAK 239
Query: 346 RHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQ 405
R FD + K V T L GY +A L + VT EGV D+ + ++L ACA
Sbjct: 240 RVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVT-EGVEWDSFVFSVVLKACASL 298
Query: 406 AALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMI 465
L+ GK+IHA + ++G++ + + + LVD Y KC + A FQ E + V ++ +I
Sbjct: 299 EELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAII 358
Query: 466 ACYAHHGHEEKAILLFEEMLEKGIKP-DAVTFVAILSAFRHCGSVEMGEKYFNSMTADYK 524
+ Y E+A+ F+ + K ++ T+ +I A +G +
Sbjct: 359 SGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSL 418
Query: 525 ISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLN 569
I + A +I +Y + L+ A E +S+ D V +F++
Sbjct: 419 IGSQYGESA-LITMYSKCGCLDDANEVFESM-DNPDIVAWTAFIS 461
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 106/269 (39%), Gaps = 68/269 (25%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWN 60
+ LNL + + H K GL L+ Y K + + + F E+ E N SW+
Sbjct: 298 LEELNLGKQI--HACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWS 355
Query: 61 TIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEH 120
IIS GY +E +A+K F ++S +
Sbjct: 356 AIIS-------------------------------GYCQMSQFE-EAVKTFKSLRSKNAS 383
Query: 121 IRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEAC 180
I ++ FT TS C L + G Q+HA +K S S + S+LI MYSKC C ++A
Sbjct: 384 I-LNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAN 442
Query: 181 RVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDA 240
VFE D V+W ISG+ G+A
Sbjct: 443 EVFESMDNP---------------------------------DIVAWTAFISGHAYYGNA 469
Query: 241 EEGLKLFVRMGENGVRWNEHTFASALSAC 269
E L+LF +M G++ N TF + L+AC
Sbjct: 470 SEALRLFEKMVSCGMKPNSVTFIAVLTAC 498
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 285 bits (729), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 187/619 (30%), Positives = 310/619 (50%), Gaps = 83/619 (13%)
Query: 60 NTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADE 119
N +I+ +K D+K AR LFD P +D++++N+M+ GY G + L+LF M+
Sbjct: 235 NALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFE-NGMCHEGLELFFAMRGLS- 292
Query: 120 HIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAV-----SSLIDMYSKCR 174
+ D T+TS ++ C L + GR +HA+++ T GFAV +SL MY
Sbjct: 293 -VDPDLMTLTSVISACELLGDRRLGRDIHAYVITT-----GFAVDISVCNSLTQMYLNAG 346
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
+ EA ++F + E D VSW T+ISGY
Sbjct: 347 SWREAEKLFS---------------------------------RMERKDIVSWTTMISGY 373
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
N ++ + + M ++ V+ +E T A+ LSAC L ++ E+H +K LIS
Sbjct: 374 EYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYV 433
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEK 354
V++ ++++Y KC+ ++ A + F ++ K
Sbjct: 434 IVANNLINMYSKCKCIDKALDI-------------------------------FHNIPRK 462
Query: 355 NVVVWTALFSGYVKAQNC-EALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKE 413
NV+ WT++ +G C EAL L +T + +A+ L L ACA AL GKE
Sbjct: 463 NVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQ---PNAITLTAALAACARIGALMCGKE 519
Query: 414 IHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGH 473
IHA++LR GV +D L + L+DMY +CG M A F N ++D+ +N+++ Y+ G
Sbjct: 520 IHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQF-NSQKKDVTSWNILLTGYSERGQ 578
Query: 474 EEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYA 533
+ LF+ M++ ++PD +TF+++L V G YF+ M DY ++P HYA
Sbjct: 579 GSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKME-DYGVTPNLKHYA 637
Query: 534 CMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGN 593
C++DL GRA +L++A +F++ +P D + G+ LN CR++ +L + + + L+
Sbjct: 638 CVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKK 697
Query: 594 NKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPK 653
+ Y+ L N+YA G W E+ ++R+ M+ AGCSWV V+ ++H F D HP+
Sbjct: 698 SVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQ 757
Query: 654 TNAIYSVLAIFTGELYEIA 672
T I +VL F ++ E+
Sbjct: 758 TKEINTVLEGFYEKMSEVG 776
Score = 116 bits (290), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 122/528 (23%), Positives = 206/528 (39%), Gaps = 136/528 (25%)
Query: 13 HVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDL 72
HV ++ G L N LI +Y K ++ +R LFD MP R++ SWN +IS ++
Sbjct: 219 HVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMC 278
Query: 73 KQARSLFDS----SPHKDLVTYNSMLC---------------GYINAEGYEAD------- 106
+ LF + S DL+T S++ Y+ G+ D
Sbjct: 279 HEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSL 338
Query: 107 ------------ALKLFIEMQSAD-----------------------------EHIRMDE 125
A KLF M+ D + ++ DE
Sbjct: 339 TQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDE 398
Query: 126 FTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEG 185
TV + L+ C L ++ G +LH +K + ++LI+MYSKC+C ++A +F
Sbjct: 399 ITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFH- 457
Query: 186 CTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLK 245
N+ KN +SW ++I+G N E L
Sbjct: 458 -----NIPRKN---------------------------VISWTSIIAGLRLNNRCFEAL- 484
Query: 246 LFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYC 305
+F+R + ++ N T +AL+AC + + C KEIH+ VL+ G+ + F+ + ++D+Y
Sbjct: 485 IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYV 544
Query: 306 KCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSG 365
+C MN A S F+S +K+V W L +G
Sbjct: 545 RCGRMNTAWS-------------------------------QFNS-QKKDVTSWNILLTG 572
Query: 366 YVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQM 425
Y + + +L V K V D + + LL C+ + G + + GV
Sbjct: 573 YSERGQGSMVVELFDRMV-KSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTP 631
Query: 426 DKKLISTLVDMYSKCGNMTYAEIIFQNF-IERDLVLYNVMI-ACYAHH 471
+ K + +VD+ + G + A Q + D ++ ++ AC HH
Sbjct: 632 NLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHH 679
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/456 (22%), Positives = 183/456 (40%), Gaps = 98/456 (21%)
Query: 29 NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHKDLV 88
N + ++ + L ++ +F +M ERN+FSWN ++ K
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAK-------------------- 172
Query: 89 TYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLH 148
+GY +A+ L+ M ++ D +T L C + ++ G+++H
Sbjct: 173 ------------QGYFDEAMCLYHRMLWVG-GVKPDVYTFPCVLRTCGGIPDLARGKEVH 219
Query: 149 AFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEM 208
+V+ + V++LI MY KC G++
Sbjct: 220 VHVVRYGYELDIDVVNALITMYVKC--------------------------------GDV 247
Query: 209 EMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSA 268
+ A F R P D +SWN +ISGY +NG EGL+LF M V + T S +SA
Sbjct: 248 KSARLLFDRMPR-RDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISA 306
Query: 269 CCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSI 328
C L + + ++IH++V+ G + V + + +Y
Sbjct: 307 CELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNA--------------------- 345
Query: 329 SSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGV 388
G+ EA + F + K++V WT + SGY + D + ++ V
Sbjct: 346 ----------GSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTY-RMMDQDSV 394
Query: 389 VTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEI 448
D + + +L ACA L G E+H ++ + + + L++MYSKC + A
Sbjct: 395 KPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALD 454
Query: 449 IFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
IF N ++++ + +IA + +A++ +M
Sbjct: 455 IFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM 490
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 121/283 (42%), Gaps = 31/283 (10%)
Query: 231 ISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGL 290
+ G NG EE +KL M E V +E F + + C R + +++S L
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIAL---- 121
Query: 291 ISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDS 350
SM L GV + +M V + GN+ +A F
Sbjct: 122 -----------------------SSMSSL-GVELGNAFLAMFVRF---GNLVDAWYVFGK 154
Query: 351 LTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHP 410
++E+N+ W L GY K + L + GV D +L C L
Sbjct: 155 MSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLAR 214
Query: 411 GKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAH 470
GKE+H +++R G ++D +++ L+ MY KCG++ A ++F RD++ +N MI+ Y
Sbjct: 215 GKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFE 274
Query: 471 HGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
+G + + LF M + PD +T +++SA G +G
Sbjct: 275 NGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGR 317
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 86/189 (45%), Gaps = 10/189 (5%)
Query: 388 VVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAE 447
V D + V L+ C + A G ++++ L + +L + + M+ + GN+ A
Sbjct: 90 VAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAW 149
Query: 448 IIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLE-KGIKPDAVTFVAILSAFRHC 506
+F ER+L +NV++ YA G+ ++A+ L+ ML G+KPD TF +L R C
Sbjct: 150 YVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVL---RTC 206
Query: 507 GSVE--MGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE----D 560
G + K + Y + D +I +Y + ++ A +P + +
Sbjct: 207 GGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWN 266
Query: 561 AVILGSFLN 569
A+I G F N
Sbjct: 267 AMISGYFEN 275
>sp|Q9SV26|PP297_ARATH Pentatricopeptide repeat-containing protein At4g01030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H65 PE=3
SV=2
Length = 768
Score = 285 bits (728), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 190/637 (29%), Positives = 328/637 (51%), Gaps = 49/637 (7%)
Query: 75 ARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNL 134
A LFD P +D + +N ++ + + +E A++LF EMQ + + + T+ L +
Sbjct: 42 ANKLFDEMPKRDDLAWNEIVMVNLRSGNWEK-AVELFREMQFSGA--KAYDSTMVKLLQV 98
Query: 135 CVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLIS 194
C GRQ+H ++++ +++ +SLI MYS+ E + +VF + NL S
Sbjct: 99 CSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDR-NLSS 157
Query: 195 KNAMVAACCREGEMEMALKTFWRQPEL----NDAVSWNTLISGYVQNGDAEEGLKLFVRM 250
N+++++ + G ++ A+ + E+ D V+WN+L+SGY G +++ + + RM
Sbjct: 158 WNSILSSYTKLGYVDDAIGLL-DEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRM 216
Query: 251 GENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENM 310
G++ + + +S L A ++K K IH ++L+N L + +V + ++D+Y K +
Sbjct: 217 QIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYL 276
Query: 311 NYAESML----------------------LLK------------GVR-NSFSISSMIVGY 335
YA + LLK G++ ++ + +S+ GY
Sbjct: 277 PYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGY 336
Query: 336 SLQGNMEEARRHFDSLTEK----NVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTD 391
+ G E+A + EK NVV WTA+FSG K N + + + +EGV +
Sbjct: 337 ATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIK-MQEEGVGPN 395
Query: 392 ALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQ 451
A + LL + LH GKE+H + LR + D + + LVDMY K G++ A IF
Sbjct: 396 AATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFW 455
Query: 452 NFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEM 511
+ L +N M+ YA G E+ I F MLE G++PDA+TF ++LS ++ G V+
Sbjct: 456 GIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQE 515
Query: 512 GEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVC 571
G KYF+ M + Y I P +H +CM+DL GR+ L++A +F++++ + DA I G+FL+ C
Sbjct: 516 GWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSC 575
Query: 572 RLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAG 631
+++R+ ELA A ++L LE +N A Y+ + N+Y+ W ++ RIR MR +
Sbjct: 576 KIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDL 635
Query: 632 CSWVYVEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
SW+ ++ +HIF +HP IY L E+
Sbjct: 636 WSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEM 672
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 124/305 (40%), Gaps = 77/305 (25%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+LK H ++ L LI +Y K L +R +FD M +N+ +WN+++S
Sbjct: 240 HLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVS 299
Query: 65 ACIKSHDLKQARSLF----DSSPHKDLVTYNSMLCGYI---------------------- 98
+ LK A +L D +T+NS+ GY
Sbjct: 300 GLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAP 359
Query: 99 ------------NAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNL--CVKLLNVGFG 144
+ G +ALK+FI+MQ +E + + T+++ L + C+ LL+ G
Sbjct: 360 NVVSWTAIFSGCSKNGNFRNALKVFIKMQ--EEGVGPNAATMSTLLKILGCLSLLHS--G 415
Query: 145 RQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCR 204
+++H F ++ + + ++L+DMY K
Sbjct: 416 KEVHGFCLRKNLICDAYVATALVDMYGK-------------------------------- 443
Query: 205 EGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFAS 264
G+++ A++ FW + A SWN ++ GY G EEG+ F M E G+ + TF S
Sbjct: 444 SGDLQSAIEIFWGIKNKSLA-SWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTS 502
Query: 265 ALSAC 269
LS C
Sbjct: 503 VLSVC 507
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040, mitochondrial
OS=Arabidopsis thaliana GN=PCMP-E88 PE=2 SV=1
Length = 1028
Score = 283 bits (725), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 214/746 (28%), Positives = 326/746 (43%), Gaps = 158/746 (21%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTII- 63
NL L+ H +AIK GL + L+ +YSK + + K+F+ + E+N WN +I
Sbjct: 342 NLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIR 401
Query: 64 ----------------------------------SACIKSHDLK---------------- 73
S C SHDL+
Sbjct: 402 GYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAK 461
Query: 74 -------------------QARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEM 114
AR +F+ +D VT+N+++ Y+ E E++A LF M
Sbjct: 462 NLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDEN-ESEAFDLFKRM 520
Query: 115 QSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCR 174
I D + STL C + + G+Q+H VK D SSLIDMYSKC
Sbjct: 521 NLCG--IVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCG 578
Query: 175 CYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGY 234
++A +VF E W VS N LI+GY
Sbjct: 579 IIKDARKVFSSLPE---------------------------W------SVVSMNALIAGY 605
Query: 235 VQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNP 294
QN + EE + LF M GV +E TFA+ + AC ++ + H + K G
Sbjct: 606 SQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRG----- 659
Query: 295 FVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQG------NMEEARRHF 348
FS +G SL G M EA F
Sbjct: 660 -------------------------------FSSEGEYLGISLLGMYMNSRGMTEACALF 688
Query: 349 DSLT-EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAA 407
L+ K++V+WT + SG+ + E E + +GV+ D V +L C++ ++
Sbjct: 689 SELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKE-MRHDGVLPDQATFVTVLRVCSVLSS 747
Query: 408 LHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER-DLVLYNVMIA 466
L G+ IH+ I + +D+ +TL+DMY+KCG+M + +F R ++V +N +I
Sbjct: 748 LREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLIN 807
Query: 467 CYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKIS 526
YA +G+ E A+ +F+ M + I PD +TF+ +L+A H G V G K F M Y I
Sbjct: 808 GYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIE 867
Query: 527 PETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGE-AEE 585
DH ACM+DL GR L++A +F+++ + DA + S L CR++ + ++ GE + E
Sbjct: 868 ARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGD-DIRGEISAE 926
Query: 586 KLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFT 645
KL+ LE N + YV L+N+YA++G W + +RK MR + G SW+ VE HIF
Sbjct: 927 KLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFA 986
Query: 646 VGDVSHPKTNAIYSVLAIFTGELYEI 671
GD SH + I +F +LY++
Sbjct: 987 AGDKSHSEIGKI----EMFLEDLYDL 1008
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 149/572 (26%), Positives = 242/572 (42%), Gaps = 94/572 (16%)
Query: 41 LRESRKLFDEMPERNVFSW----------------------NTIISACIKSHDLKQARSL 78
L +SRK+FDEMP+R + N I+ K + A
Sbjct: 58 LFKSRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQ 117
Query: 79 FDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKL 138
FD KD+ +NSML Y ++ G L+ F+ + + I ++FT + L+ C +
Sbjct: 118 FDF-LEKDVTAWNSMLSMY-SSIGKPGKVLRSFVSL--FENQIFPNKFTFSIVLSTCARE 173
Query: 139 LNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAM 198
NV FGRQ+H M+K + + + +L+DMY+KC +A RVFE + N + +
Sbjct: 174 TNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDP-NTVCWTCL 232
Query: 199 VAACCREGEMEMA----------------------LKTFWRQPELNDA------------ 224
+ + G E A + T+ R +L DA
Sbjct: 233 FSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDV 292
Query: 225 VSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSW 284
V+WN +ISG+ + G ++ F M ++ V+ T S LSA + N+ +H+
Sbjct: 293 VAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAE 352
Query: 285 VLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEA 344
+K GL SN +V S +V +Y KCE ME A
Sbjct: 353 AIKLGLASNIYVGSSLVSMYSKCE-------------------------------KMEAA 381
Query: 345 RRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACAL 404
+ F++L EKN V W A+ GY + +L + + G D LL CA
Sbjct: 382 AKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMD-MKSSGYNIDDFTFTSLLSTCAA 440
Query: 405 QAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVM 464
L G + H+ I++ + + + + LVDMY+KCG + A IF+ +RD V +N +
Sbjct: 441 SHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTI 500
Query: 465 IACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYK 524
I Y +E +A LF+ M GI D + L A H + G K + ++
Sbjct: 501 IGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQG-KQVHCLSVKCG 559
Query: 525 ISPETDHYACMIDLYGRANQLEKAIEFMKSIP 556
+ + + +ID+Y + ++ A + S+P
Sbjct: 560 LDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 183/385 (47%), Gaps = 40/385 (10%)
Query: 223 DAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIH 282
D +WN+++S Y G + L+ FV + EN + N+ TF+ LS C NV+ ++IH
Sbjct: 124 DVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIH 183
Query: 283 SWVLKNGLISNPFVSSGIVDVYCKCENMNYA----------------------------- 313
++K GL N + +VD+Y KC+ ++ A
Sbjct: 184 CSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPE 243
Query: 314 ESMLLLKGVRNS------FSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
E++L+ + +R+ + ++I Y G +++AR F ++ +VV W + SG+
Sbjct: 244 EAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHG 303
Query: 368 KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDK 427
K + CE + + K V + L +L A + A L G +HA +++G+ +
Sbjct: 304 K-RGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNI 362
Query: 428 KLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEK 487
+ S+LV MYSKC M A +F+ E++ V +N MI YAH+G K + LF +M
Sbjct: 363 YVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSS 422
Query: 488 GIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEK 547
G D TF ++LS +EMG + F+S+ K++ ++D+Y + LE
Sbjct: 423 GYNIDDFTFTSLLSTCAASHDLEMGSQ-FHSIIIKKKLAKNLFVGNALVDMYAKCGALED 481
Query: 548 AIEFMKSIPTEEDA---VILGSFLN 569
A + + + ++ I+GS++
Sbjct: 482 ARQIFERMCDRDNVTWNTIIGSYVQ 506
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 142/310 (45%), Gaps = 43/310 (13%)
Query: 275 VKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVG 334
++ K +HS L G+ S + + IVD+Y KC ++YAE
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAE-------------------- 115
Query: 335 YSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVK-AQNCEALFDLLSEFVTKEGVVTDAL 393
+ FD L EK+V W ++ S Y + + L +S F + + +
Sbjct: 116 -----------KQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQ--IFPNKF 161
Query: 394 ILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNF 453
I+L CA + + G++IH +++MG++ + LVDMY+KC ++ A +F+
Sbjct: 162 TFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWI 221
Query: 454 IERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGE 513
++ + V + + + Y G E+A+L+FE M ++G +PD + FV +++ + G ++
Sbjct: 222 VDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDAR 281
Query: 514 KYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEF---MKSIPTEEDAVILGSFLNV 570
F M+ SP+ + MI +G+ AIE+ M+ + LGS L+
Sbjct: 282 LLFGEMS-----SPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
Query: 571 CRLNRNAELA 580
+ N +L
Sbjct: 337 IGIVANLDLG 346
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 282 bits (721), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 192/729 (26%), Positives = 327/729 (44%), Gaps = 136/729 (18%)
Query: 3 SLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNV------ 56
S +L + H + + TI N ++ +Y K LR++R++FD MPERN+
Sbjct: 80 SRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSV 139
Query: 57 -----------------------------FSWNTIISACIKSHD---------------- 71
F++ +II AC S D
Sbjct: 140 ITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLES 199
Query: 72 -------------------LKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFI 112
+ A +F P KDL++++S++ G+ + G+E +AL
Sbjct: 200 SSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGF-SQLGFEFEALSHLK 258
Query: 113 EMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSK 172
EM S +E+ S+L C LL +G Q+H +K+ + A SL DMY++
Sbjct: 259 EMLSFGV-FHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYAR 317
Query: 173 CRCYEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLIS 232
C A RVF+ Q E D SWN +I+
Sbjct: 318 CGFLNSARRVFD---------------------------------QIERPDTASWNVIIA 344
Query: 233 GYVQNGDAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLIS 292
G NG A+E + +F +M +G + + S L A + +IHS+++K G ++
Sbjct: 345 GLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLA 404
Query: 293 NPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLT 352
+ V + ++ +Y C ++ Y E+ R + DS
Sbjct: 405 DLTVCNSLLTMYTFCSDL------------------------YCCFNLFEDFRNNADS-- 438
Query: 353 EKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGK 412
V W + + ++ + + L + E D + + LL C ++L G
Sbjct: 439 ----VSWNTILTACLQHEQPVEMLRLFKLMLVSE-CEPDHITMGNLLRGCVEISSLKLGS 493
Query: 413 EIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHG 472
++H Y L+ G+ ++ + + L+DMY+KCG++ A IF + RD+V ++ +I YA G
Sbjct: 494 QVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSG 553
Query: 473 HEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHY 532
E+A++LF+EM GI+P+ VTFV +L+A H G VE G K + +M ++ ISP +H
Sbjct: 554 FGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHC 613
Query: 533 ACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEG 592
+C++DL RA +L +A F+ + E D V+ + L+ C+ N LA +A E +L+++
Sbjct: 614 SCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDP 673
Query: 593 NNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHP 652
N +V L +++A+ GNW +R M+ + G SW+ +E +IHIF D+ HP
Sbjct: 674 FNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHP 733
Query: 653 KTNAIYSVL 661
+ + IY+VL
Sbjct: 734 ERDDIYTVL 742
Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 160/378 (42%), Gaps = 68/378 (17%)
Query: 127 TVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGC 186
T S + C ++ GR++H ++ ++ + ++ MY KC
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKC------------- 115
Query: 187 TEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKL 246
G + A + F PE N VS+ ++I+GY QNG E ++L
Sbjct: 116 -------------------GSLRDAREVFDFMPERN-LVSYTSVITGYSQNGQGAEAIRL 155
Query: 247 FVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
+++M + + ++ F S + AC +V K++H+ V+K S+ + ++ +Y +
Sbjct: 156 YLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVR 215
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGY 366
M+ A + +++ S SS+I G+S G EA H + V
Sbjct: 216 FNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGV---------- 265
Query: 367 VKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHP--GKEIHAYILRMGVQ 424
F E + + L AC+ + L P G +IH ++ +
Sbjct: 266 ---------------FHPNEYIFGSS------LKACS--SLLRPDYGSQIHGLCIKSELA 302
Query: 425 MDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEM 484
+ +L DMY++CG + A +F D +NV+IA A++G+ ++A+ +F +M
Sbjct: 303 GNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQM 362
Query: 485 LEKGIKPDAVTFVAILSA 502
G PDA++ ++L A
Sbjct: 363 RSSGFIPDAISLRSLLCA 380
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 83/164 (50%), Gaps = 1/164 (0%)
Query: 396 VILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIE 455
+ L+ AC+ +L G++IH +IL + D L + ++ MY KCG++ A +F E
Sbjct: 71 ISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPE 130
Query: 456 RDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKY 515
R+LV Y +I Y+ +G +AI L+ +ML++ + PD F +I+ A V +G K
Sbjct: 131 RNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLG-KQ 189
Query: 516 FNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEE 559
++ + S +I +Y R NQ+ A IP ++
Sbjct: 190 LHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKD 233
>sp|Q9SX45|PPR75_ARATH Pentatricopeptide repeat-containing protein At1g50270
OS=Arabidopsis thaliana GN=PCMP-E42 PE=2 SV=1
Length = 596
Score = 279 bits (714), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 160/518 (30%), Positives = 263/518 (50%), Gaps = 67/518 (12%)
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
Q HA +VK D+ F +SLI YS ++ A R+F+G ++
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDK---------------- 167
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRWNEHTFASA 265
D V+W +I G+V+NG A E + FV M + GV NE T S
Sbjct: 168 -----------------DVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSV 210
Query: 266 LSACCGLRNVKCAKEIHSWVLKNGLIS-NPFVSSGIVDVYCKCENMNYAESMLLLKGVRN 324
L A + +V+ + +H L+ G + + F+ S +VD+Y KC +
Sbjct: 211 LKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYD------------- 257
Query: 325 SFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVT 384
+A++ FD + +NVV WTAL +GYV+++ C L+ E +
Sbjct: 258 ------------------DAQKVFDEMPSRNVVTWTALIAGYVQSR-CFDKGMLVFEEML 298
Query: 385 KEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMT 444
K V + L +L ACA ALH G+ +H Y+++ ++++ +TL+D+Y KCG +
Sbjct: 299 KSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLE 358
Query: 445 YAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFR 504
A ++F+ E+++ + MI +A HG+ A LF ML + P+ VTF+A+LSA
Sbjct: 359 EAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACA 418
Query: 505 HCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVIL 564
H G VE G + F SM + + P+ DHYACM+DL+GR LE+A ++ +P E V+
Sbjct: 419 HGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVW 478
Query: 565 GSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGM 624
G+ C L+++ EL A ++++L+ ++ RY LAN+Y+ NW E+ R+RKQM+
Sbjct: 479 GALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQ 538
Query: 625 KGNRFAGCSWVYVEHEIHIFTVGDVSHP-KTNAIYSVL 661
+ + G SW+ V+ ++ F D P +++ +Y L
Sbjct: 539 QVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTL 576
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 118/460 (25%), Positives = 204/460 (44%), Gaps = 87/460 (18%)
Query: 34 IYSKHN---LLRESRKLFDEMP------------ERNVFSWNTIISACIKSHDLKQARSL 78
I S+H LL+ KL D P + + F N++IS S A L
Sbjct: 101 IPSRHTFPPLLKAVFKLRDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRL 160
Query: 79 FDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKL 138
FD + KD+VT+ +M+ G++ G ++A+ F+EM+ + +E TV S L K+
Sbjct: 161 FDGAEDKDVVTWTAMIDGFVR-NGSASEAMVYFVEMKKTG--VAANEMTVVSVLKAAGKV 217
Query: 139 LNVGFGRQLHAFMVKTSN-DASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNA 197
+V FGR +H ++T F SSL+DMY KC CY++A +VF+ + S+N
Sbjct: 218 EDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFD------EMPSRN- 270
Query: 198 MVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENGVRW 257
V+W LI+GYVQ+ ++G+ +F M ++ V
Sbjct: 271 --------------------------VVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAP 304
Query: 258 NEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESML 317
NE T +S LSAC + + + +H +++KN + N + ++D+Y KC
Sbjct: 305 NEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKC---------- 354
Query: 318 LLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFD 377
G +EEA F+ L EKNV WTA+ +G+ FD
Sbjct: 355 ---------------------GCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFD 393
Query: 378 LLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYIL-RMGVQMDKKLISTLVDM 436
L ++ V + + + +L ACA + G+ + + R ++ + +VD+
Sbjct: 394 LFYTMLSSH-VSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDL 452
Query: 437 YSKCGNMTYAEIIFQNF-IERDLVLYNVMI-ACYAHHGHE 474
+ + G + A+ + + +E V++ + +C H +E
Sbjct: 453 FGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYE 492
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 150/327 (45%), Gaps = 39/327 (11%)
Query: 227 WNTLISGYVQNG---DAEEGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHS 283
W++LI G+ G + + M NGV + HTF L A LR+ + H+
Sbjct: 70 WDSLI-GHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSN-PFQFHA 127
Query: 284 WVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEE 343
++K GL S+PF VRN S+I GYS G +
Sbjct: 128 HIVKFGLDSDPF--------------------------VRN-----SLISGYSSSGLFDF 156
Query: 344 ARRHFDSLTEKNVVVWTALFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACA 403
A R FD +K+VV WTA+ G+V+ + E + K GV + + +V +L A
Sbjct: 157 ASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVE-MKKTGVAANEMTVVSVLKAAG 215
Query: 404 LQAALHPGKEIHAYILRMG-VQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYN 462
+ G+ +H L G V+ D + S+LVDMY KC A+ +F R++V +
Sbjct: 216 KVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWT 275
Query: 463 VMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTAD 522
+IA Y +K +L+FEEML+ + P+ T ++LSA H G++ G + M +
Sbjct: 276 ALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKN 335
Query: 523 YKISPETDHYACMIDLYGRANQLEKAI 549
I T +IDLY + LE+AI
Sbjct: 336 -SIEINTTAGTTLIDLYVKCGCLEEAI 361
Score = 92.8 bits (229), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 128/274 (46%), Gaps = 41/274 (14%)
Query: 1 MRSLNLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPER-----N 55
+R+ + EA++ V+ K G+ +T ++ K +R R + E +
Sbjct: 180 VRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCD 239
Query: 56 VFSWNTIISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQ 115
VF ++++ K A+ +FD P +++VT+ +++ GY+ + ++ L +F EM
Sbjct: 240 VFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGML-VFEEML 298
Query: 116 SADEHIRMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRC 175
+D + +E T++S L+ C + + GR++H +M+K S + + A ++LID+Y KC C
Sbjct: 299 KSD--VAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGC 356
Query: 176 YEEACRVFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYV 235
EEA VFE E+ + +W +I+G+
Sbjct: 357 LEEAILVFERLHEK---------------------------------NVYTWTAMINGFA 383
Query: 236 QNGDAEEGLKLFVRMGENGVRWNEHTFASALSAC 269
+G A + LF M + V NE TF + LSAC
Sbjct: 384 AHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSAC 417
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 97/218 (44%), Gaps = 6/218 (2%)
Query: 344 ARRHFDSLTEKNVVVWTAL---FSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLG 400
ARR L ++ +W +L FSG + L L + + GV+ LL
Sbjct: 55 ARRLLCQLQTLSIQLWDSLIGHFSGGITLN--RRLSFLAYRHMRRNGVIPSRHTFPPLLK 112
Query: 401 ACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVL 460
A +P + HA+I++ G+ D + ++L+ YS G +A +F ++D+V
Sbjct: 113 AVFKLRDSNPF-QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVT 171
Query: 461 YNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMT 520
+ MI + +G +A++ F EM + G+ + +T V++L A V G
Sbjct: 172 WTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYL 231
Query: 521 ADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTE 558
++ + + ++D+YG+ + + A + +P+
Sbjct: 232 ETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSR 269
>sp|Q9C8L6|PPR80_ARATH Pentatricopeptide repeat-containing protein At1g53600,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E63 PE=2
SV=2
Length = 717
Score = 278 bits (710), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 196/692 (28%), Positives = 334/692 (48%), Gaps = 48/692 (6%)
Query: 14 VQAIKAGLTLTTITT-----NQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIK 68
Q + L TT +T N I ++++ L+E+ +F +M R++ SW +ISA +
Sbjct: 34 TQKTRNFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAE 93
Query: 69 SHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTV 128
+ + +A +FD P + +YN+M+ I + A +LF ++ E
Sbjct: 94 NGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIP---------EKNA 144
Query: 129 TSTLNLCVKLLNVGFGRQLHAFMVKTSND-ASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
S + + G + +T A + L+ Y + + EA RVF+G
Sbjct: 145 VSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMA 204
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
+ ++S ++MV C+ G + A F R E N ++W +I GY + G E+G LF
Sbjct: 205 VK-EVVSCSSMVHGYCKMGRIVDARSLFDRMTERN-VITWTAMIDGYFKAGFFEDGFGLF 262
Query: 248 VRMGENG-VRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCK 306
+RM + G V+ N +T A AC + +IH V + L + F+ + ++ +Y K
Sbjct: 263 LRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSK 322
Query: 307 CENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTAL---F 363
M A+++ + ++S S +S+I G + + EA F+ + K++V WT + F
Sbjct: 323 LGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGF 382
Query: 364 SGYVKAQNCEALFDLLSE------------FVT---------------KEGVVTDALILV 396
SG + C LF ++ E FV+ ++ V ++
Sbjct: 383 SGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFS 442
Query: 397 ILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFIER 456
+L A A A L G +IH +++M + D + ++LV MY KCGN A IF E
Sbjct: 443 SVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEP 502
Query: 457 DLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYF 516
++V YN MI+ Y+++G +KA+ LF + G +P+ VTF+A+LSA H G V++G KYF
Sbjct: 503 NIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYF 562
Query: 517 NSMTADYKISPETDHYACMIDLYGRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRN 576
SM + Y I P DHYACM+DL GR+ L+ A + ++P + + + GS L+ + +
Sbjct: 563 KSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLR 622
Query: 577 AELAGEAEEKLLRLEGNNKARYVQLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVY 636
+LA A +KL+ LE ++ YV L+ +Y+ G + RI + + + G SW+
Sbjct: 623 VDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWII 682
Query: 637 VEHEIHIFTVGDVSHPKTNAIYSVLAIFTGEL 668
++ E+H F GD S I L + E+
Sbjct: 683 LKGEVHNFLAGDESQLNLEEIGFTLKMIRKEM 714
Score = 38.1 bits (87), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 5/117 (4%)
Query: 5 NLKEALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIIS 64
+L E L H + +K + N L+ +Y K ++ K+F + E N+ S+NT+IS
Sbjct: 453 DLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMIS 512
Query: 65 ACIKSHDLKQARSLF----DSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSA 117
+ K+A LF S + VT+ ++L ++ GY K F M+S+
Sbjct: 513 GYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHV-GYVDLGWKYFKSMKSS 568
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 277 bits (708), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 170/538 (31%), Positives = 270/538 (50%), Gaps = 73/538 (13%)
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
V L LC + V + H +++ + ++ LI+ YSKC E A +VF+G
Sbjct: 64 VHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGML 123
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
E VSWNT+I Y +N E L +F
Sbjct: 124 ER---------------------------------SLVSWNTMIGLYTRNRMESEALDIF 150
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKC----AKEIHSWVLKNGLISNPFVSSGIVDV 303
+ M G +++E T +S LSAC V C K++H +K + N +V + ++D+
Sbjct: 151 LEMRNEGFKFSEFTISSVLSAC----GVNCDALECKKLHCLSVKTCIDLNLYVGTALLDL 206
Query: 304 YCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALF 363
Y KC G +++A + F+S+ +K+ V W+++
Sbjct: 207 YAKC-------------------------------GMIKDAVQVFESMQDKSSVTWSSMV 235
Query: 364 SGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGV 423
+GYV+ +N E LL + + + L ++ AC+ AAL GK++HA I + G
Sbjct: 236 AGYVQNKNYEEAL-LLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGF 294
Query: 424 QMDKKLISTLVDMYSKCGNMTYAEIIFQNFIERDLVLYNVMIACYAHHGHEEKAILLFEE 483
+ + S+ VDMY+KCG++ + IIF E++L L+N +I+ +A H ++ ++LFE+
Sbjct: 295 GSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEK 354
Query: 484 MLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLYGRAN 543
M + G+ P+ VTF ++LS H G VE G ++F M Y +SP HY+CM+D+ GRA
Sbjct: 355 MQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAG 414
Query: 544 QLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYVQLAN 603
L +A E +KSIP + A I GS L CR+ +N ELA A EKL LE N +V L+N
Sbjct: 415 LLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSN 474
Query: 604 VYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYSVL 661
+YAA W E+ + RK +R + G SW+ ++ ++H F+VG+ HP+ I S L
Sbjct: 475 IYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTL 532
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/441 (24%), Positives = 195/441 (44%), Gaps = 102/441 (23%)
Query: 8 EALICHVQAIKAGLTLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACI 67
EA CH + I+ L N LI+ YSK + +R++FD M ER++ SWNT+I
Sbjct: 79 EAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIG--- 135
Query: 68 KSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFT 127
L T N M E++AL +F+EM+ +E + EFT
Sbjct: 136 -------------------LYTRNRM----------ESEALDIFLEMR--NEGFKFSEFT 164
Query: 128 VTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCT 187
++S L+ C + ++LH VKT D + + ++L+D+Y+KC ++A +VFE
Sbjct: 165 ISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ 224
Query: 188 EEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLF 247
++ +V+W+++++GYVQN + EE L L+
Sbjct: 225 DK---------------------------------SSVTWSSMVAGYVQNKNYEEALLLY 251
Query: 248 VRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKC 307
R + N+ T +S + AC L + K++H+ + K+G SN FV+S VD+Y KC
Sbjct: 252 RRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKC 311
Query: 308 ENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTALFSGYV 367
G++ E+ F + EKN+ +W + SG+
Sbjct: 312 -------------------------------GSLRESYIIFSEVQEKNLELWNTIISGFA 340
Query: 368 KAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDK 427
K + + +L E + ++G+ + + LL C + G+ ++R +
Sbjct: 341 KHARPKEVM-ILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFK-LMRTTYGLSP 398
Query: 428 KLI--STLVDMYSKCGNMTYA 446
++ S +VD+ + G ++ A
Sbjct: 399 NVVHYSCMVDILGRAGLLSEA 419
>sp|O64766|PP185_ARATH Pentatricopeptide repeat-containing protein At2g35030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E15 PE=2
SV=1
Length = 627
Score = 276 bits (707), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 178/603 (29%), Positives = 301/603 (49%), Gaps = 53/603 (8%)
Query: 62 IISACIKSHDLKQARSLFDSSPHKDLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHI 121
+I K + +AR LFD P +D+VT+ ++ GYI G +A +LF + S
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKL-GDMREARELFDRVDS----- 105
Query: 122 RMDEFTVTSTLNLCVKLLNVGFGRQLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACR 181
R + T T+ ++ ++ + L M + + + +++ID Y++ ++A
Sbjct: 106 RKNVVTWTAMVSGYLRSKQLSIAEMLFQEMP----ERNVVSWNTMIDGYAQSGRIDKALE 161
Query: 182 VFEGCTEEVNLISKNAMVAACCREGEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAE 241
+F+ E N++S N+MV A + G ++ A+ F R P D VSW ++ G +NG +
Sbjct: 162 LFDEMPER-NIVSWNSMVKALVQRGRIDEAMNLFERMPR-RDVVSWTAMVDGLAKNGKVD 219
Query: 242 EGLKLFVRMGENGVRWNEHTFASALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIV 301
E +LF C RN I SW N +I+
Sbjct: 220 EARRLF--------------------DCMPERN------IISW---NAMITG-------- 242
Query: 302 DVYCKCENMNYAESMLLLKGVRNSFSISSMIVGYSLQGNMEEARRHFDSLTEKNVVVWTA 361
Y + ++ A+ + + R+ S ++MI G+ M +A FD + EKNV+ WT
Sbjct: 243 --YAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTT 300
Query: 362 LFSGYVKAQNCEALFDLLSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRM 421
+ +GYV+ + E ++ S+ + V + V +L AC+ A L G++IH I +
Sbjct: 301 MITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKS 360
Query: 422 GVQMDKKLISTLVDMYSKCGNMTYAEIIFQNFI--ERDLVLYNVMIACYAHHGHEEKAIL 479
Q ++ + S L++MYSK G + A +F N + +RDL+ +N MIA YAHHGH ++AI
Sbjct: 361 VHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIE 420
Query: 480 LFEEMLEKGIKPDAVTFVAILSAFRHCGSVEMGEKYFNSMTADYKISPETDHYACMIDLY 539
++ +M + G KP AVT++ +L A H G VE G ++F + D + +HY C++DL
Sbjct: 421 MYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLC 480
Query: 540 GRANQLEKAIEFMKSIPTEEDAVILGSFLNVCRLNRNAELAGEAEEKLLRLEGNNKARYV 599
GRA +L+ F+ G+ L+ C ++ +A E +K+L ++ YV
Sbjct: 481 GRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYV 540
Query: 600 QLANVYAAEGNWAEMGRIRKQMRGMKGNRFAGCSWVYVEHEIHIFTVGDVSHPKTNAIYS 659
++N+YAA G E +R +M+ + GCSWV V + H+F VGD SHP+ A+ S
Sbjct: 541 LMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDS 600
Query: 660 VLA 662
+L+
Sbjct: 601 ILS 603
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 127/475 (26%), Positives = 221/475 (46%), Gaps = 26/475 (5%)
Query: 26 ITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKSHDLKQARSLFDSSPHK 85
+T ++ Y + L + LF EMPERNV SWNT+I +S + +A LFD P +
Sbjct: 110 VTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPER 169
Query: 86 DLVTYNSMLCGYINAEGYEADALKLFIEMQSADEHIRMDEFTVTSTLNLCVKLLNVGFGR 145
++V++NSM+ + G +A+ LF M R D + T+ ++ K V R
Sbjct: 170 NIVSWNSMVKALVQ-RGRIDEAMNLFERMP------RRDVVSWTAMVDGLAKNGKVDEAR 222
Query: 146 QLHAFMVKTSNDASGFAVSSLIDMYSKCRCYEEACRVFEGCTEEVNLISKNAMVAACCRE 205
+L M + + + +++I Y++ +EA ++F+ E + S N M+ R
Sbjct: 223 RLFDCMP----ERNIISWNAMITGYAQNNRIDEADQLFQ-VMPERDFASWNTMITGFIRN 277
Query: 206 GEMEMALKTFWRQPELNDAVSWNTLISGYVQNGDAEEGLKLFVRMGENG-VRWNEHTFAS 264
EM A F R PE N +SW T+I+GYV+N + EE L +F +M +G V+ N T+ S
Sbjct: 278 REMNKACGLFDRMPEKN-VISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVS 336
Query: 265 ALSACCGLRNVKCAKEIHSWVLKNGLISNPFVSSGIVDVYCKCENMNYAESMLL--LKGV 322
LSAC L + ++IH + K+ N V+S ++++Y K + A M L
Sbjct: 337 ILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQ 396
Query: 323 RNSFSISSMIVGYSLQGNMEEARRHFDSLT----EKNVVVWTALFSGYVKAQNCEALFDL 378
R+ S +SMI Y+ G+ +EA ++ + + + V + L A E +
Sbjct: 397 RDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEF 456
Query: 379 LSEFVTKEGVVTDALILVILLGACALQAALHPGKEIHAYILRMGVQMDKKLISTLVDMYS 438
+ V E + L+ C L K++ +I ++ + ++ +
Sbjct: 457 FKDLVRDESLPLREEHYTCLVDLCGRAGRL---KDVTNFINCDDARLSRSFYGAILSACN 513
Query: 439 KCGNMTYAEIIFQNFIER---DLVLYNVMIACYAHHGHEEKAILLFEEMLEKGIK 490
++ A+ + + +E D Y +M YA +G E+A + +M EKG+K
Sbjct: 514 VHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLK 568
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.135 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 237,347,863
Number of Sequences: 539616
Number of extensions: 9608976
Number of successful extensions: 30962
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 403
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 21243
Number of HSP's gapped (non-prelim): 2975
length of query: 676
length of database: 191,569,459
effective HSP length: 124
effective length of query: 552
effective length of database: 124,657,075
effective search space: 68810705400
effective search space used: 68810705400
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)