BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005804
(676 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A5CFP2|TILS_ORITB tRNA(Ile)-lysidine synthase OS=Orientia tsutsugamushi (strain
Boryong) GN=tilS PE=3 SV=1
Length = 441
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 160/327 (48%), Gaps = 45/327 (13%)
Query: 84 RIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDG-LLAITVDHGLREESKEEANI 142
++A+ VSGG DS+AL +L W E + G + +T+DH LR ES EA+
Sbjct: 22 KLAIAVSGGTDSLALMLLVKHW-----------NEKVKGEITVLTIDHHLRSESTSEADY 70
Query: 143 VSHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHAD 202
VS + I+ + V W+ + G++Q AR RY L C +H I L+ HHAD
Sbjct: 71 VSSICQN--IKLQHVTLHWIH-KGITGNIQAQARKARYHLLTNYCQEHDILHLITGHHAD 127
Query: 203 DQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFSKDDMY 262
D E F +RL R +G+ GL S H+ +++ ++RPL + +K D+
Sbjct: 128 DIVENFFIRLLRGAGLAGL---------------SSHNIFFVNNVRIIRPLFNITKQDLK 172
Query: 263 KICQGGNRDWVEDPTNRSPLFVRNRIRMSLGDL---SSCSFKSEL---QAVISACRRTRS 316
K + N W+ DP+N S ++R ++R L + +F EL + ++S TR+
Sbjct: 173 KYLEQQNIKWINDPSNNSNKYLRTQVRDLLKSMLISFQNNFTVELLKKRIMLSQMHLTRA 232
Query: 317 YVEHVCSNLIN---EAVTVMDQGYAVIDLEILNPSKIEDIFLSKFLALVLQFICQRQRPV 373
++ V + +I+ AV + G+AVID ++ + E + L+ +L + +P
Sbjct: 233 -LDSVNNEIIHYVVYAVKIYSAGFAVIDRKLFRQASPEARY--AILSYLLMIVGANTKPQ 289
Query: 374 RGST-SKLLLHYIRTFPCKTSLTAAGC 399
R S+ ++LH I+ + T T GC
Sbjct: 290 RFSSLQHIILHDIQEY--NTYKTLHGC 314
>sp|B3CUJ5|TILS_ORITI tRNA(Ile)-lysidine synthase OS=Orientia tsutsugamushi (strain
Ikeda) GN=tilS PE=3 SV=1
Length = 441
Score = 123 bits (309), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 161/327 (49%), Gaps = 45/327 (13%)
Query: 84 RIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAI-TVDHGLREESKEEANI 142
++A+ VSGG DS+AL +L W E + G + I T+DH LR ES EA+
Sbjct: 22 KLAIAVSGGSDSLALMLLVKHW-----------NEKVKGEITILTIDHHLRSESTSEADY 70
Query: 143 VSHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHAD 202
VS + I+ + V W+ + G++Q AR RY+L C +H I L+ HHAD
Sbjct: 71 VSSICQN--IKLQHVTLHWIH-KGITGNIQAQARKARYQLLTNYCQEHDILHLITGHHAD 127
Query: 203 DQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFSKDDMY 262
D E F +RL R +G+ GL S H+ +++ ++RPL + +K D+
Sbjct: 128 DIVENFFIRLLRGAGLAGL---------------SSHNLFFVNNVRIIRPLFNITKQDLK 172
Query: 263 KICQGGNRDWVEDPTNRSPLFVRNRIRMSLGDL---SSCSFKSEL---QAVISACRRTRS 316
K + N W+ DP+N S ++R ++R L + +F EL + ++S T++
Sbjct: 173 KYLEQQNIKWINDPSNSSNKYLRTQVRDLLKSMLISFQHNFTVELLKKRIMLSQMHLTQA 232
Query: 317 YVEHVCSNLINEAVTVM---DQGYAVIDLEILNPSKIEDIFLSKFLALVLQFICQRQRPV 373
+E V + +I+ V V+ G+AVID ++ + E + L+ +L + +P
Sbjct: 233 -LESVNNEIIHYVVHVVKIYSAGFAVIDRKLFKKASPEARY--AILSYLLMIVGANTKPP 289
Query: 374 RGST-SKLLLHYIRTFPCKTSLTAAGC 399
R S+ ++ LH I+ + T T GC
Sbjct: 290 RFSSLQRISLHDIQEY--NTYKTLHGC 314
>sp|Q73FR9|TILS_WOLPM tRNA(Ile)-lysidine synthase OS=Wolbachia pipientis wMel GN=tilS
PE=3 SV=1
Length = 431
Score = 120 bits (300), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 150/319 (47%), Gaps = 28/319 (8%)
Query: 82 HHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEAN 141
++++A+ VSGG DS+ L L W + +A+TV+HGLR ES++EA+
Sbjct: 18 NNQVAVAVSGGVDSIVLLHLMTNWAKKNK---------LSLPIALTVNHGLRPESQKEAD 68
Query: 142 IVSHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHA 201
V ++G + + +W + + +G++Q AR RY+L + C + + LL+AHH
Sbjct: 69 FVVSYAKELGAKESFI-LNW-EKQNIKGNIQLQARKARYKLLAEWCKNNNVKYLLVAHHK 126
Query: 202 DDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFSKDDM 261
DDQAE F+LRL R SGV GL+ M + S + + I + RPLL+FS+ ++
Sbjct: 127 DDQAETFLLRLERGSGVDGLSSMDYKSFL--------------NGIDIFRPLLNFSRSEI 172
Query: 262 YKICQGGNRDWVEDPTNRSPLFVRNRIRMSLGDLSSCSFKSELQAVISA-CRRTRSYVEH 320
K + W+ED +N + R R L + +E + + +R + H
Sbjct: 173 EKYAKLHRLKWIEDRSNHDLKYRRTLYRNLLKASDNQEILTERICLTALHMKRAAKALMH 232
Query: 321 VCSNLINEAVTVMDQGYAVIDLEILNPSKIEDIFLSKFLALVLQFICQRQRPVRGSTSKL 380
N+ V V D GY I L E+I L L ++ + +P R S+
Sbjct: 233 YTRLAFNDCVNVHDLGYIEIKLSEFYQLP-EEIALRLLLYSIMAIASKHYKP-RYSSLIA 290
Query: 381 LLHYIRTFPCKTSLTAAGC 399
+ + I + T +GC
Sbjct: 291 IFNRILQKDSNVNCTLSGC 309
>sp|A8GY99|TILS_RICB8 tRNA(Ile)-lysidine synthase OS=Rickettsia bellii (strain OSU
85-389) GN=tilS PE=3 SV=1
Length = 430
Score = 120 bits (300), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 172/383 (44%), Gaps = 54/383 (14%)
Query: 84 RIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIV 143
+IA+ VSGG DS+AL L W N E L ++VDH LR++SK+E +
Sbjct: 21 KIAIAVSGGSDSVALLYLANIWAKKN---NIE-------LFVLSVDHNLRDQSKQEIEYI 70
Query: 144 SHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADD 203
+ +D+G++ + + D + +LQE AR RY L +C + I VLL AHH DD
Sbjct: 71 QNTANDLGLKFYSL---FFDHQNNFSNLQERARKGRYDLMTSLCQKLDILVLLTAHHEDD 127
Query: 204 QAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFSKDDMYK 263
E F LRL R SGV GL SS + + H++ + ++RPL + K ++
Sbjct: 128 YIENFCLRLERKSGVFGL----------SSSSVNWHNNTQ-----IIRPLFNIPKSELVN 172
Query: 264 ICQGGNRDWVEDPTNRSPLFVRNRIRMSLGDLSSCSFKSEL---QAVISACRRTRSYVEH 320
N W ED +N S + RN IR L K ++ Q ++ + E
Sbjct: 173 YLATNNIKWFEDQSNLSTKYRRNTIRQKLAK-EEVYIKDDIITQQIKVNELIENKFKPEL 231
Query: 321 VCSNLINEAVTVMDQGYAVIDLEILNPSKIEDIFLSKFLALVLQFICQRQRPVRGSTSKL 380
+ + I E+V + + G+A +DL + S + + +L I +QR R + +
Sbjct: 232 ISA--IAESVKISEYGFAFLDL--IKFSGFSQEVRVQLINFLLIIISGQQRSARFYSVEP 287
Query: 381 LLHYIR-TFPCKTSLTAAGCYLCPTPGSRGTKALVCSSIDGPLP-SKLEL---------F 429
+L IR + K +L GC + K L+ LP SKL L F
Sbjct: 288 ILKLIRQSLDFKNTL--HGCVIKRMQN----KLLIYREFGKKLPESKLLLDKQLVWDNRF 341
Query: 430 QIHSDGEQRHCVTDVEQILEDAK 452
+I + + +CV LED K
Sbjct: 342 RITKNHDIENCVATYLS-LEDYK 363
>sp|C0R4S1|TILS_WOLWR tRNA(Ile)-lysidine synthase OS=Wolbachia sp. subsp. Drosophila
simulans (strain wRi) GN=tilS PE=3 SV=1
Length = 431
Score = 119 bits (299), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 150/319 (47%), Gaps = 28/319 (8%)
Query: 82 HHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEAN 141
++++A+ VSGG DS+ L L W + A+TV+HGLR ES++EA+
Sbjct: 18 NNQVAVAVSGGVDSIVLLHLMTNWAKKNK---------LSLPTALTVNHGLRPESQKEAD 68
Query: 142 IVSHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHA 201
V ++G + + +W + + +G++Q AR RY+L + C + + LL+AHH
Sbjct: 69 FVVSYAKELGAKESFI-LNW-EKQNIKGNIQLQARKARYKLLAEWCKNNNVKYLLVAHHK 126
Query: 202 DDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFSKDDM 261
DDQAE F+LRL R SGV GL+ M + S + + I + RPLL+FS+ ++
Sbjct: 127 DDQAETFLLRLERGSGVDGLSSMDYKSFL--------------NGIYIFRPLLNFSRSEI 172
Query: 262 YKICQGGNRDWVEDPTNRSPLFVRNRIRMSLGDLSSCSFKSELQAVISA-CRRTRSYVEH 320
K + W+ED +N + R R L + +E + + +R + H
Sbjct: 173 EKYAKLHRLKWIEDRSNYDLKYRRTLYRNLLKASDNQEILTERICLTALHMKRAAKALMH 232
Query: 321 VCSNLINEAVTVMDQGYAVIDLEILNPSKIEDIFLSKFLALVLQFICQRQRPVRGSTSKL 380
N+ V V D GY I L E+I L L ++ + +P R ++ +
Sbjct: 233 YTRLAFNDCVNVHDLGYIEIKLSEFYQLP-EEIALRLLLYSIMAIASKHYKP-RYNSLIV 290
Query: 381 LLHYIRTFPCKTSLTAAGC 399
+ + I + T +GC
Sbjct: 291 IFNKILQKDSNVNCTLSGC 309
>sp|Q1RGN9|TILS_RICBR tRNA(Ile)-lysidine synthase OS=Rickettsia bellii (strain RML369-C)
GN=tilS PE=3 SV=1
Length = 430
Score = 119 bits (298), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 171/383 (44%), Gaps = 54/383 (14%)
Query: 84 RIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIV 143
+IA+ VSGG DS+AL L W N E L ++VDH LR++SK+E +
Sbjct: 21 KIAIAVSGGSDSVALLYLANIWAKKN---NIE-------LFVLSVDHNLRDQSKQEIEYI 70
Query: 144 SHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADD 203
+ +D+G++ + + D + +LQE AR RY L +C + I VLL AHH DD
Sbjct: 71 QNTANDLGLKFYSL---FFDHQNNFSNLQERARKGRYDLMTSLCQKLDILVLLTAHHEDD 127
Query: 204 QAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFSKDDMYK 263
E F LRL R SGV GL SS + + H++ + ++RPL + K ++
Sbjct: 128 YIENFCLRLERKSGVFGL----------SSSSVNWHNNTQ-----IIRPLFNIPKSELVN 172
Query: 264 ICQGGNRDWVEDPTNRSPLFVRNRIRMSLGDLSSCSFKSEL---QAVISACRRTRSYVEH 320
N W ED +N S + RN IR L K ++ Q ++ + E
Sbjct: 173 YLATNNIKWFEDQSNLSTKYRRNTIRQKLAK-EEVYIKDDIITQQIKVNELIENKFKPEL 231
Query: 321 VCSNLINEAVTVMDQGYAVIDLEILNPSKIEDIFLSKFLALVLQFICQRQRPVRGSTSKL 380
+ + I E+V + + G+A +DL + S + + +L I +QR R + +
Sbjct: 232 ISA--IAESVKISEYGFAFLDL--IKFSGFSQEVRVQLINFLLIIISGQQRSARFYSVEP 287
Query: 381 LLHYIR-TFPCKTSLTAAGCYLCPTPGSRGTKALVCSSIDGPLP-SKLEL---------F 429
+L IR + K +L GC + K L+ LP SKL L F
Sbjct: 288 ILKLIRQSLDFKNTL--HGCVIKRMQN----KLLIYREFGKKLPESKLLLDKQLVWDNRF 341
Query: 430 QIHSDGEQRHCVTDVEQILEDAK 452
+I + +CV LED K
Sbjct: 342 RITKNHNIENCVATYLS-LEDYK 363
>sp|B3CLY6|TILS_WOLPP tRNA(Ile)-lysidine synthase OS=Wolbachia pipientis subsp. Culex
pipiens (strain wPip) GN=tilS PE=3 SV=1
Length = 430
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 151/319 (47%), Gaps = 28/319 (8%)
Query: 82 HHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEAN 141
H++IA+ VSGG DS+ L L W + +A+TV+HGLR ES++EA+
Sbjct: 17 HNQIAVAVSGGVDSIVLLHLMTNWAKKNK---------LSLPIALTVNHGLRSESQKEAD 67
Query: 142 IVSHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHA 201
+ ++G + + +W + + +G++Q AR RY+L + C + + LL+AHH
Sbjct: 68 FIISYAKELGAKESFI-LNW-EKQNIKGNIQLQARKARYKLLAEWCKNNNVKCLLVAHHK 125
Query: 202 DDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFSKDDM 261
DDQAE F+LRL R SGV GL+ M + S + + I + RPLL+FS+ ++
Sbjct: 126 DDQAETFLLRLERGSGVDGLSSMDYKSFL--------------NGIYIFRPLLNFSRSEI 171
Query: 262 YKICQGGNRDWVEDPTNRSPLFVRNRIRMSLGDLSSCSFKSELQAVISA-CRRTRSYVEH 320
+ + W+ED +N + R R L + +E + + +R + H
Sbjct: 172 ERYAKLHQLRWIEDRSNYDLKYRRTLYRNLLKASDNQDVLTERICLTALHMKRAAKALMH 231
Query: 321 VCSNLINEAVTVMDQGYAVIDLEILNPSKIEDIFLSKFLALVLQFICQRQRPVRGSTSKL 380
++ V V D GY I L E+I L L ++ + +P R ++ +
Sbjct: 232 YTRLAFDDCVNVHDFGYIEIKLSEFYQLP-EEIALRLLLYSIMAIASKHYKP-RYNSLIV 289
Query: 381 LLHYIRTFPCKTSLTAAGC 399
+ + I + T +GC
Sbjct: 290 IFNKILQKGSNVNCTLSGC 308
>sp|Q5GTD2|TILS_WOLTR tRNA(Ile)-lysidine synthase OS=Wolbachia sp. subsp. Brugia malayi
(strain TRS) GN=tilS PE=3 SV=1
Length = 431
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 124/262 (47%), Gaps = 26/262 (9%)
Query: 82 HHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEAN 141
++++A+ VSGG DS+ L L W E + +A+ V+HGLR ES+EE
Sbjct: 18 NNKVAVAVSGGIDSIVLLHLITSW--------AEKRQ-CPPPIALAVNHGLRPESQEEVE 68
Query: 142 IVSHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHA 201
V ++G++ + +W K G++Q AR RY L + C + + L IAHH
Sbjct: 69 FVVSYAKELGVKKSFI-LNWKRQNIK-GNVQSQARKARYELLTEWCKNNDVKHLFIAHHK 126
Query: 202 DDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFSKDDM 261
DDQAE F+LRL R SG+ GL+ M + S + + + ++RPLL FS+ +
Sbjct: 127 DDQAETFLLRLERGSGLDGLSSMDYKSSL--------------NGVCMLRPLLSFSRSRI 172
Query: 262 YKICQGGNRDWVEDPTNRSPLFVRNRIRMSLGDLSSCSFKSELQAVISA-CRRTRSYVEH 320
K WVED +N+S + R R L + +E + + +R + H
Sbjct: 173 KKYADFYRLKWVEDRSNQSLKYKRTLYRNLLKASGNQEILTERICLTTLHIKRATKALMH 232
Query: 321 VCSNLINEAVTVMDQGYAVIDL 342
N+ V V D GY I L
Sbjct: 233 YTRLAFNDCVNVHDLGYIEIKL 254
>sp|A8GLX9|TILS_RICAH tRNA(Ile)-lysidine synthase OS=Rickettsia akari (strain Hartford)
GN=tilS PE=3 SV=1
Length = 430
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 127/262 (48%), Gaps = 34/262 (12%)
Query: 84 RIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIV 143
+IA+ VSGG DS+AL L W N E L I+VDH LRE+SK+E V
Sbjct: 21 KIAVAVSGGSDSVALLYLANIWAEKN---NIE-------LSVISVDHNLREQSKQETYYV 70
Query: 144 SHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADD 203
+ + + + + D + +LQE AR RY L +C++ I VLL AHH DD
Sbjct: 71 QNISNSLNRKHYSLS---FDHQNNFSNLQERARAGRYDLMTNLCLEFDILVLLTAHHEDD 127
Query: 204 QAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFSKDDMYK 263
E F LRL RNSG+ GL SS + Y ++I ++RPL + K ++ +
Sbjct: 128 YVENFCLRLERNSGIFGL-----SSSNINWY----------NNIQIIRPLYNIPKSELVE 172
Query: 264 ICQGGNRDWVEDPTNRSPLFVRNRIRMSLGDLSSCSFKSEL---QAVISACRRTRSYVEH 320
N W ED +N S + RN IR L + K+E+ Q I+ + E
Sbjct: 173 YLVSHNIKWFEDESNSSDKYRRNIIRQKLAK-GAGYIKAEIILQQLKINDLLDNKFKPEL 231
Query: 321 VCSNLINEAVTVMDQGYAVIDL 342
+ + I EAV + + G+A +DL
Sbjct: 232 ISA--IAEAVKIFEYGFAFLDL 251
>sp|Q4UN67|TILS_RICFE tRNA(Ile)-lysidine synthase OS=Rickettsia felis (strain ATCC
VR-1525 / URRWXCal2) GN=tilS PE=3 SV=1
Length = 430
Score = 113 bits (282), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 125/277 (45%), Gaps = 64/277 (23%)
Query: 84 RIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIV 143
+IA VSGG DS+AL L W N E L I+VDH LRE+SK+E + +
Sbjct: 21 KIAAAVSGGSDSVALLYLANIWAEKN---NIE-------LSVISVDHNLREQSKQETHYI 70
Query: 144 SHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADD 203
+ + + + + D + +LQE AR+ RY L +C++ I VLL AHH DD
Sbjct: 71 QNISNSLNRKHYSLS---FDHQNNFSNLQERAREGRYDLMTNLCLELDILVLLTAHHEDD 127
Query: 204 QAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFSKDDMYK 263
E F LRL RNSG+ GL SS + Y ++I ++RPL + K ++ +
Sbjct: 128 YVENFCLRLERNSGIFGL-----SSSNINWY----------NNIQIIRPLYNIPKSELVE 172
Query: 264 ICQGGNRDWVEDPTNRSPLFVRNRIR------------------MSLGDLSSCSFKSELQ 305
N W ED +N S + RN IR + + DL FK EL
Sbjct: 173 YLVSHNIKWFEDESNSSDKYRRNIIRQKLAKGEDYIKADIILQQLKINDLLDNKFKPELI 232
Query: 306 AVISACRRTRSYVEHVCSNLINEAVTVMDQGYAVIDL 342
+ I+ EAV + + G+A +DL
Sbjct: 233 SAIA------------------EAVKIFEYGFAFLDL 251
>sp|A8GQJ7|TILS_RICRS tRNA(Ile)-lysidine synthase OS=Rickettsia rickettsii (strain Sheila
Smith) GN=tilS PE=3 SV=1
Length = 478
Score = 110 bits (275), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 105/210 (50%), Gaps = 28/210 (13%)
Query: 84 RIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIV 143
+I++ VSGG DS+AL L W N E L I+VDH LRE+SK+E + +
Sbjct: 21 KISIAVSGGSDSVALLYLANIWAEKN---NIE-------LFVISVDHNLREQSKQETHYI 70
Query: 144 SHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADD 203
+ + + + + D + +LQE AR+ RY L +C++ I VLL AHH DD
Sbjct: 71 QNISNSLNRKHYSLS---FDHQNNFSNLQERAREGRYDLMTNLCLELDILVLLTAHHEDD 127
Query: 204 QAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFSKDDMYK 263
E F LRL RNSG+ GL SS + Y ++I ++RPL + K ++ +
Sbjct: 128 YVENFCLRLERNSGIFGL-----SSSNINWY----------NNIHIIRPLYNIPKSELVE 172
Query: 264 ICQGGNRDWVEDPTNRSPLFVRNRIRMSLG 293
N W ED +N S + RN IR L
Sbjct: 173 YLVSHNIKWFEDESNSSDKYRRNVIRQKLA 202
>sp|B0BVY4|TILS_RICRO tRNA(Ile)-lysidine synthase OS=Rickettsia rickettsii (strain Iowa)
GN=tilS PE=3 SV=1
Length = 478
Score = 110 bits (275), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 105/210 (50%), Gaps = 28/210 (13%)
Query: 84 RIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIV 143
+I++ VSGG DS+AL L W N E L I+VDH LRE+SK+E + +
Sbjct: 21 KISIAVSGGSDSVALLYLANIWAEKN---NIE-------LFVISVDHNLREQSKQETHYI 70
Query: 144 SHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADD 203
+ + + + + D + +LQE AR+ RY L +C++ I VLL AHH DD
Sbjct: 71 QNISNSLNRKHYSLS---FDHQNNFSNLQERAREGRYDLMTNLCLELDILVLLTAHHEDD 127
Query: 204 QAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFSKDDMYK 263
E F LRL RNSG+ GL SS + Y ++I ++RPL + K ++ +
Sbjct: 128 YVENFCLRLERNSGIFGL-----SSSNINWY----------NNIHIIRPLYNIPKSELVE 172
Query: 264 ICQGGNRDWVEDPTNRSPLFVRNRIRMSLG 293
N W ED +N S + RN IR L
Sbjct: 173 YLVSHNIKWFEDESNSSDKYRRNVIRQKLA 202
>sp|Q9ZEA3|TILS_RICPR tRNA(Ile)-lysidine synthase OS=Rickettsia prowazekii (strain Madrid
E) GN=tilS PE=3 SV=1
Length = 430
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 139/290 (47%), Gaps = 48/290 (16%)
Query: 84 RIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIV 143
+IA+ VSGG DS++L L W N E L I+VDH LR +SK+E +
Sbjct: 21 KIAIAVSGGSDSISLLYLANIWARKN---NIE-------LFVISVDHNLRPQSKQENYYI 70
Query: 144 SHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADD 203
S++ + + D + +LQE AR+ RY L +C++ + VLL AHH DD
Sbjct: 71 HTISSNLNRKYYNLS---FDHQNNFSNLQERAREGRYDLMTNLCLELDVLVLLTAHHEDD 127
Query: 204 QAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFSKDDMYK 263
E F LRL RNSG+ GL+ SS I + Y+ +I ++RPL + K ++ +
Sbjct: 128 YVENFCLRLERNSGIFGLS----SSNI---HWYN--------NIQIIRPLYNIPKSELVE 172
Query: 264 ICQGGNRDWVEDPTNRSPLFVRNRIRMSLGDLSSCSFKSE--LQAVISACR-RTRSYVEH 320
W ED +N S + RN IR L FK E ++A IS + +T +E
Sbjct: 173 YLVNHKIKWFEDESNLSDKYRRNIIRQKL-------FKEENYIKAEISLQQLKTNKLIED 225
Query: 321 ----VCSNLINEAVTVMDQGYAVIDLEILNPSKIEDIFLSKFLALVLQFI 366
+ I EAV + + G+ +DL D FL++ A ++ F+
Sbjct: 226 ELKPALISAIAEAVKIFEYGFTFLDLVKF------DKFLNEVKAQIINFL 269
>sp|A8F0E8|TILS_RICM5 tRNA(Ile)-lysidine synthase OS=Rickettsia massiliae (strain Mtu5)
GN=tilS PE=3 SV=1
Length = 477
Score = 110 bits (274), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 105/210 (50%), Gaps = 28/210 (13%)
Query: 84 RIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIV 143
+I++ VSGG DS+AL L W N E L I+VDH LRE+SK+E + +
Sbjct: 21 KISIAVSGGSDSVALLYLANIWAEKN---NIE-------LFVISVDHNLREQSKQETHYI 70
Query: 144 SHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADD 203
+ + + + + D + +LQE AR+ RY L +C++ I VLL AHH DD
Sbjct: 71 QNISNSLNRKHYSLS---FDHQNNFSNLQERAREGRYDLMTNLCLELDILVLLTAHHEDD 127
Query: 204 QAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFSKDDMYK 263
E F LRL RNSG+ GL SS + Y ++I ++RPL + K ++ +
Sbjct: 128 YVENFCLRLERNSGIFGL-----SSSNINWY----------NNIQIIRPLYNIPKSELVE 172
Query: 264 ICQGGNRDWVEDPTNRSPLFVRNRIRMSLG 293
N W ED +N S + RN IR L
Sbjct: 173 YLVSHNIKWFEDESNSSDKYRRNVIRQKLA 202
>sp|A5ERG8|TILS_BRASB tRNA(Ile)-lysidine synthase OS=Bradyrhizobium sp. (strain BTAi1 /
ATCC BAA-1182) GN=tilS PE=3 SV=1
Length = 358
Score = 110 bits (274), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 108/216 (50%), Gaps = 31/216 (14%)
Query: 85 IALGVSGGPDSMALCVLTAGWKT---GGFNQNGEAGEFIDGLLAITVDHGLREESKEEAN 141
+ L VSGGPDSMAL L A W+ GG LLA+TVDHGLR ES+ EA
Sbjct: 30 LTLAVSGGPDSMALMWLAARWRATRAGGPR-----------LLAVTVDHGLRPESRREAL 78
Query: 142 IVSHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHA 201
+V +G+ +R W +P G + EAAR RYRL + Q ++ AH
Sbjct: 79 MVKQLARQLGLTHRTLR--WSGEKPAAG-IPEAARIARYRLLARAAEQAGASHVVTAHTR 135
Query: 202 DDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFSKDDM 261
DDQAE ++RL R SG+ GLA MA S + +LL RPLL SK +
Sbjct: 136 DDQAETVLMRLLRGSGIAGLAAMAPVS--------------RRDGLLLARPLLSLSKARL 181
Query: 262 YKICQGGNRDWVEDPTNRSPLFVRNRIRMSLGDLSS 297
+ + +DPTNR P F R R+R + L++
Sbjct: 182 LATLRSAGIAFADDPTNRDPAFTRPRLRALMPTLAA 217
>sp|Q68XR8|TILS_RICTY tRNA(Ile)-lysidine synthase OS=Rickettsia typhi (strain ATCC VR-144
/ Wilmington) GN=tilS PE=3 SV=1
Length = 430
Score = 109 bits (273), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 128/266 (48%), Gaps = 42/266 (15%)
Query: 84 RIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIV 143
+IA+ VSGG DS+AL L W N E L I+VDH LR +SK+E +
Sbjct: 21 KIAIAVSGGSDSVALLYLANIWAEKN---NIE-------LFIISVDHNLRAQSKQENYYI 70
Query: 144 SHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADD 203
+++ + + D + +LQ AR+ RY L +C++ + VLL AHH DD
Sbjct: 71 QSISNNLKRKYYNLS---FDHQNNFSNLQARAREGRYDLMTNLCLELDVLVLLTAHHEDD 127
Query: 204 QAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFSKDDMYK 263
E F LRL RNSG+ GL+ SS I + Y+ +I ++RPL + K ++ K
Sbjct: 128 YVENFCLRLERNSGIFGLS----SSNI---HWYN--------NIQIIRPLYNIPKSELVK 172
Query: 264 ICQGGNRDWVEDPTNRSPLFVRNRIRMSLGDLSSCSFKSE--LQAVISACR-RTRSYVEH 320
W ED +N S + RN IR L FK E ++A IS + +T +E
Sbjct: 173 YLVTNKIKWFEDESNLSDKYRRNIIRQKL-------FKEENYIKAEISVQQLKTNKLIED 225
Query: 321 VCS----NLINEAVTVMDQGYAVIDL 342
+ I EAV + + G+ +DL
Sbjct: 226 ELKPELISAIGEAVKIFEYGFTFLDL 251
>sp|Q92JK0|TILS_RICCN tRNA(Ile)-lysidine synthase OS=Rickettsia conorii (strain ATCC
VR-613 / Malish 7) GN=tilS PE=3 SV=1
Length = 478
Score = 109 bits (273), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 105/210 (50%), Gaps = 28/210 (13%)
Query: 84 RIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIV 143
+I++ VSGG DS+AL L W N E L I+VDH LRE+SK+E + +
Sbjct: 21 KISIAVSGGSDSVALLYLANIWAEKN---NIE-------LFVISVDHNLREQSKQETHYI 70
Query: 144 SHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADD 203
+ + + + + D + +LQE AR+ RY L +C++ I VLL AHH DD
Sbjct: 71 QNISNSLNRKHYSLS---FDHQNNFSNLQERAREGRYDLMTNLCLELDILVLLTAHHEDD 127
Query: 204 QAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFSKDDMYK 263
E F LRL RNSG+ GL SS + Y ++I ++RPL + K ++ +
Sbjct: 128 YVENFCLRLERNSGIFGL-----SSSNINWY----------NNIQIIRPLYNIPKSELVE 172
Query: 264 ICQGGNRDWVEDPTNRSPLFVRNRIRMSLG 293
N W ED +N S + RN IR L
Sbjct: 173 YLVRHNIKWFEDESNSSDKYRRNVIRQKLA 202
>sp|Q5LNU7|TILS_RUEPO tRNA(Ile)-lysidine synthase OS=Ruegeria pomeroyi (strain ATCC
700808 / DSM 15171 / DSS-3) GN=tilS PE=3 SV=1
Length = 419
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 115/231 (49%), Gaps = 27/231 (11%)
Query: 80 KPHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEE 139
+P R+ + VSGG DS+AL L A + GE L TVDHGLR ES E
Sbjct: 21 QPPRRLGVAVSGGGDSVALMHLLA--------RCFPRGEVK--LCVATVDHGLRSESASE 70
Query: 140 ANIVSHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAH 199
A +V+ + + +G+ E + G +G+LQ+ AR RY L +++++ + +AH
Sbjct: 71 AALVARQAAGLGLPHETLLWT---GWTGEGNLQDQARRARYGLLTDWALRNRVTTVALAH 127
Query: 200 HADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFSKD 259
ADDQAE ++RL R++GV GLA MA ++LVRPLL ++D
Sbjct: 128 TADDQAETLLMRLGRSAGVSGLAAMAPRRM--------------QDGVVLVRPLLGITRD 173
Query: 260 DMYKICQGGNRDWVEDPTNRSPLFVRNRIRMSLGDLSSCSFKSELQAVISA 310
+ + W EDP+N + R + R +L L+ ++ A ++A
Sbjct: 174 ALRDFLRAEGIAWAEDPSNEDIRYDRIKARQALAGLAPMGIDAQRLAEVAA 224
>sp|C4K162|TILS_RICPU tRNA(Ile)-lysidine synthase OS=Rickettsia peacockii (strain Rustic)
GN=tilS PE=3 SV=1
Length = 533
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 105/210 (50%), Gaps = 28/210 (13%)
Query: 84 RIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIV 143
++++ VSGG DS+AL L W N E L I+VDH LRE+SK+E + +
Sbjct: 21 KMSIAVSGGSDSVALLYLANIWAEKN---NIE-------LFVISVDHNLREQSKQETHYI 70
Query: 144 SHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADD 203
+ + + + + D + +LQE AR+ RY L +C++ I VLL AHH DD
Sbjct: 71 QNISNSLNRKHYSLS---FDHQNNFSNLQERAREGRYDLMTNLCLELDILVLLTAHHEDD 127
Query: 204 QAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFSKDDMYK 263
E F LRL RNSG+ GL SS + Y ++I ++RPL + K ++ +
Sbjct: 128 YVENFCLRLERNSGIFGL-----SSSNINWY----------NNIHIIRPLYNIPKSELVE 172
Query: 264 ICQGGNRDWVEDPTNRSPLFVRNRIRMSLG 293
N W ED +N S + RN IR L
Sbjct: 173 YLVSHNIKWFEDESNSSDKYRRNVIRQKLA 202
>sp|Q0C5V2|TILS_HYPNA tRNA(Ile)-lysidine synthase OS=Hyphomonas neptunium (strain ATCC
15444) GN=tilS PE=3 SV=1
Length = 367
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 143/343 (41%), Gaps = 44/343 (12%)
Query: 85 IALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIVS 144
+ + VSGG DS+AL +L W + G L A+TVDHGLR ES+ EA V
Sbjct: 27 VGVAVSGGSDSLALLILAHRWAA----RRGRV------LRALTVDHGLRPESRAEAEAVG 76
Query: 145 HRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADDQ 204
+DMGI +I+R + R Q A R R+ + +LL H ADDQ
Sbjct: 77 RLCADMGIEHDILRLEGAAPR------QSALRRGRHAALARTIADKSGHLLLTGHTADDQ 130
Query: 205 AELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFSKDDMYKI 264
AE F++R + SG GLAGM + S + + + + RPLL ++ +
Sbjct: 131 AETFLMRARQGSGWYGLAGM---RPLSLSPVWP-----EGEGVFIARPLLGIRREALRAF 182
Query: 265 CQGGNRDWVEDPTNRSPLFVRNRIRMSLGDLSSCSFKSELQAVISACRR---TRSYVEHV 321
+ W +DP+N +P F R R+R L C S V+S R R +
Sbjct: 183 LRDEGLGWADDPSNDNPAFERVRMRRLL-----CPEMSRNVPVLSLVDRFQTLRMIEDGA 237
Query: 322 CSNLINEAVTVMDQGYAVIDLEILNPSKIEDIFLSKFLALVLQFICQRQRPVRGSTSKLL 381
+ V + G V P + ++ L ++LQ R+ P RG + + L
Sbjct: 238 IWRWMTANVRAGEAGIHVASFAGHPPERA-----ARALGMLLQIAAGREMPPRGESLRRL 292
Query: 382 LHYIRTFPCKTSLTAAGCYLCPTPGSRGTKALVCSSID-GPLP 423
I + T GC + + +C + GPLP
Sbjct: 293 AEEIVSKGDFRGATLGGCRIT------ARRTHICLKPECGPLP 329
>sp|Q5P9R1|TILS_ANAMM tRNA(Ile)-lysidine synthase OS=Anaplasma marginale (strain St.
Maries) GN=tilS PE=3 SV=2
Length = 466
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 86 ALGVSGGPDSMALCVLTAGW-KTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIVS 144
A+ VSGG DS+ L L A KT ++ + +T +HG R E+ E V
Sbjct: 38 AVAVSGGVDSITLLNLVAALHKTQATSRP----------VVLTGNHGFRAEADHETRFVQ 87
Query: 145 HRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADDQ 204
R +G+ CEI+R W R QE AR++RY L + C +H + LL AH+ DQ
Sbjct: 88 KRAVALGLDCEILR--WNRHRTSSKS-QETAREIRYSLLHQWCTEHSVKFLLTAHNKSDQ 144
Query: 205 AELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFSKDDMYKI 264
AE ++ L R SG+ GL+GM H+ I + RPLL F++ ++ +
Sbjct: 145 AETVLMHLERGSGIDGLSGM--------------HERSVFGDITIYRPLLGFTRQEILEY 190
Query: 265 CQGGNRDWVEDPTNRSPLFVRNRIR 289
WVEDP+N+ P + R R
Sbjct: 191 ATQKQLSWVEDPSNQDPKYRRTFFR 215
>sp|Q9XBG6|TILS_BRAJA tRNA(Ile)-lysidine synthase OS=Bradyrhizobium japonicum (strain
USDA 110) GN=tilS PE=3 SV=1
Length = 361
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 107/223 (47%), Gaps = 29/223 (13%)
Query: 77 AGLKPHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDG--LLAITVDHGLRE 134
A LK + L VSGGPDS+AL L A W+ G L +TVDHGLR
Sbjct: 19 AELKSAPALVLAVSGGPDSIALMWLAARWQR----------SLARGPRLTVVTVDHGLRA 68
Query: 135 ESKEEANIVSHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGV 194
E+ EA V +++G+ +R W +PK G L AAR+ RYRL +
Sbjct: 69 EAAREAREVKRLATELGLPHRTLR--WRGAKPKTG-LPAAAREARYRLLMQAARSAGASH 125
Query: 195 LLIAHHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLL 254
+L AH DDQAE ++RL R SG+ GL+ MA ++ I+L RPLL
Sbjct: 126 VLTAHTRDDQAETLLMRLVRGSGLAGLSAMARLTE--------------RDGIVLARPLL 171
Query: 255 DFSKDDMYKICQGGNRDWVEDPTNRSPLFVRNRIRMSLGDLSS 297
D K + + + +DPTNR F R R+R L L++
Sbjct: 172 DVPKAQLIATLKRAKIGFADDPTNRDTAFTRPRLRALLPQLAA 214
>sp|Q98F87|TILS_RHILO tRNA(Ile)-lysidine synthase OS=Rhizobium loti (strain MAFF303099)
GN=tilS PE=3 SV=1
Length = 454
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 135/305 (44%), Gaps = 39/305 (12%)
Query: 83 HRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANI 142
H VSGG DS AL +L F++ G + + LLA+T+DHGLR+ S EA
Sbjct: 20 HGAVAAVSGGSDSTALLLLL----KHHFDRTGSSAK----LLAVTIDHGLRQGSAAEAQA 71
Query: 143 VSHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHAD 202
V+ ++ GI + W +P G L AARD RY L + IG+++ H AD
Sbjct: 72 VAKLCAERGIAHRTL--TWTGRKPSTG-LPAAARDARYHLLAEAARAEGIGLIVTGHTAD 128
Query: 203 DQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFSKDDMY 262
DQAE ++R +R+ + LAG + ++ L + +VRPLL + +
Sbjct: 129 DQAETVLMRHARDRELADLAGRGLAGMAPAT--------LYDWREWIVRPLLGTRRSALR 180
Query: 263 KICQGGNRDWVEDPTNRSPLFVRNRIRMSLGDLSSCSFKSEL----QAVI-------SAC 311
+ + W EDPTN F R R+R +L S+ ++ L QA + SA
Sbjct: 181 DFLRREHVGWAEDPTNIDEAFERPRVRAALAGESAGHMENTLRLAGQAAVERGQLGASAA 240
Query: 312 RRTRSYVEHVCSNLI--NEAVTVMDQGYAVIDLEILNPSKIEDIFLSK-------FLALV 362
R + LI + A+ + D A+ L IL + FL F+ L
Sbjct: 241 NLIRRIASQPSTGLIRLDPALLIADDQAAIYALRILLATAGGAAFLPDQARSAALFVRLK 300
Query: 363 LQFIC 367
F+C
Sbjct: 301 AGFLC 305
>sp|C3PM75|TILS_RICAE tRNA(Ile)-lysidine synthase OS=Rickettsia africae (strain ESF-5)
GN=tilS PE=3 SV=1
Length = 478
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 103/210 (49%), Gaps = 28/210 (13%)
Query: 84 RIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIV 143
+I++ VSGG DS+AL L W N E L I+VDH LRE+SK+E + +
Sbjct: 21 KISIAVSGGSDSVALLYLANIWAEKN---NIE-------LFVISVDHNLREQSKQETHYI 70
Query: 144 SHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADD 203
+ + + + + + +LQE AR+ RY L +C++ I VLL AHH DD
Sbjct: 71 QNISNSLNRKHYSLS---FYHQNNFSNLQERAREGRYDLMTNLCLELDILVLLTAHHEDD 127
Query: 204 QAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFSKDDMYK 263
E F LRL RNSG+ GL SS + Y ++I ++RPL + K + +
Sbjct: 128 YVENFCLRLERNSGIFGL-----SSSNINWY----------NNIQIIRPLYNIPKSKLVE 172
Query: 264 ICQGGNRDWVEDPTNRSPLFVRNRIRMSLG 293
N W ED +N S + RN IR L
Sbjct: 173 YLVRHNIKWFEDESNSSDKYRRNVIRQKLA 202
>sp|Q6NAQ6|TILS_RHOPA tRNA(Ile)-lysidine synthase OS=Rhodopseudomonas palustris (strain
ATCC BAA-98 / CGA009) GN=tilS PE=3 SV=1
Length = 346
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 114/244 (46%), Gaps = 28/244 (11%)
Query: 61 TDMTKYREAFSRRMAMAGLKPHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFI 120
TD +RR+ A K I L VSGGPDS+AL L A W+ + G A
Sbjct: 4 TDHEAVSATEARRL-FADWKAAPAIVLAVSGGPDSLALMWLAARWRKA--LKRGPA---- 56
Query: 121 DGLLAITVDHGLREESKEEANIVSHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRY 180
L +TVDHGLR E+ EA V + + + +R W +P G +Q AAR RY
Sbjct: 57 --LAVVTVDHGLRPEAAAEARAVKRLAASLDLPHRTLR--WSGDKPSTG-IQAAARGARY 111
Query: 181 RLFQKVCIQHQIGVLLIAHHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHD 240
RL K ++ AH DDQAE ++RLSR SG+ GLA MA
Sbjct: 112 RLLAKAAKTLGASHVMTAHTRDDQAETVLMRLSRGSGIAGLAAMA--------------R 157
Query: 241 DLKNHSILLVRPLLDFSKDDMYKICQGGNRDWVEDPTNRSPLFVRNRIRMSLGDLSS--C 298
+++ ++L RPLLD K + + DP+N P F R R+R + L++ C
Sbjct: 158 EIERDGVVLARPLLDVPKARLIATLAKARIAFATDPSNADPRFTRPRLRELMPQLAAEGC 217
Query: 299 SFKS 302
+S
Sbjct: 218 DARS 221
>sp|Q5NLX8|TILS_ZYMMO tRNA(Ile)-lysidine synthase OS=Zymomonas mobilis subsp. mobilis
(strain ATCC 31821 / ZM4 / CP4) GN=tilS PE=3 SV=1
Length = 329
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 143/305 (46%), Gaps = 38/305 (12%)
Query: 84 RIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIV 143
++ + VSGG DS+AL +L G +F + A+TVDHG+R E+ EEA V
Sbjct: 31 KLGIAVSGGSDSLALLLL------------GAVSDF--PVEAVTVDHGMRPEAAEEARFV 76
Query: 144 SHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADD 203
+ +G+ +I+ +Q AAR RY L + + +G L+ AHHADD
Sbjct: 77 AQICQQIGVPHQILTTKI---EANGEGMQAAARIRRYALMAEWAKEKNVGALMTAHHADD 133
Query: 204 QAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFSKDDMYK 263
QAE F++R +R SG+ GLA + I + + + L+RPLL F++ + +
Sbjct: 134 QAETFLMRAARGSGLNGLAAIRPDVVITA----------EGQKLRLLRPLLGFTRSALAE 183
Query: 264 ICQGGNRDWVEDPTNRSPLFVRNRIRMSLGDLSSCSFKSELQAVISACRRTRSYVEHVCS 323
I + +V DP+N +P + R R L S + + C+++ +E + +
Sbjct: 184 IVEKAGFTFVSDPSNDNPHYDRTHFRRLL-KASPWINRQHIAEAARYCQQSEEAIEWITA 242
Query: 324 NLINEAVTVMDQGYAVIDLEILNPSKIEDIFLSKFLALVLQFICQRQRPVRGSTSKLLLH 383
A + +G ++ L+P+++ L + + ++ I +RGS L
Sbjct: 243 K--EAAARIRKKG----EVLYLDPTELPIEILRRLVLRAMETITG-NTALRGSA---LSR 292
Query: 384 YIRTF 388
+IR+
Sbjct: 293 FIRSL 297
>sp|Q5FQB6|TILS_GLUOX tRNA(Ile)-lysidine synthase OS=Gluconobacter oxydans (strain 621H)
GN=tilS PE=3 SV=1
Length = 398
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 96/208 (46%), Gaps = 32/208 (15%)
Query: 85 IALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIVS 144
+ L VSGG DSMAL L W+ ++A VDH LR ES EA +
Sbjct: 16 VGLAVSGGADSMALAFLARRWRRN--------------VVAFVVDHALRPESAAEAQLTV 61
Query: 145 HRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADDQ 204
HR++ M ++ ++ L PK G +QE AR R+ + C+ LL+AHHA DQ
Sbjct: 62 HRLAGMNVKARLLT---LAPFPK-GRMQERARHARFEALEAACVSEGCLDLLVAHHAGDQ 117
Query: 205 AELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFSKDDMYKI 264
E +R SG LGL+G+ S I LVRPLL F +
Sbjct: 118 DETVWMRHLHASGPLGLSGIQPVS--------------VRGRIRLVRPLLTFPTARLRLT 163
Query: 265 CQGGNRDWVEDPTNRSPLFVRNRIRMSL 292
Q N W+EDP+N + F R R+R L
Sbjct: 164 LQAENLPWIEDPSNANRRFERVRLRQDL 191
>sp|Q839B3|TILS_ENTFA tRNA(Ile)-lysidine synthase OS=Enterococcus faecalis (strain ATCC
700802 / V583) GN=tilS PE=3 SV=1
Length = 462
Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 135/299 (45%), Gaps = 32/299 (10%)
Query: 70 FSRRMAMAGL-KPHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITV 128
F +R G +PH I + VSGG DSMAL L Q E + L+ V
Sbjct: 5 FYKRGKEQGFWQPHQTIVVAVSGGVDSMALLTL--------MEQVAEKEQL--QLVVAHV 54
Query: 129 DHGLREESKEEANIVSHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCI 188
+H LRE S +EA ++ + R W D KQ +L+ AR RY F++V
Sbjct: 55 NHQLREASAQEAQYLATYCQQRELTYYETR--WEDPE-KQRNLEAKARTFRYEFFKEVME 111
Query: 189 QHQIGVLLIAHHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSIL 248
VL+ AHH DDQAE +++L R + AG I ++ +
Sbjct: 112 IEGAAVLMTAHHLDDQAETILMKLIRGTNFSHSAG------IKERRPFATGE-------- 157
Query: 249 LVRPLLDFSKDDMYKICQGGNRDWVEDPTNRSPLFVRNRIR---MSLGDLSSCSFKSELQ 305
L+RPLL + K+++Y+ Q + ED TN++ ++RNR+R + L + F ++
Sbjct: 158 LIRPLLIYPKEELYQFAQRQAFVYFEDETNQTNEYLRNRLRNQVLPLLKQENPQFLDQIA 217
Query: 306 AVISACRRTRSYVEHVCSNLINEAVTVMDQGYAVIDLEILNPSK-IEDIFLSKFLALVL 363
+ + R + +++ ++EAV QG+ + +L + + FL+ F L
Sbjct: 218 SFSNEQRFAQEFIQEQIEPQLSEAVEPTKQGWRIPLKRLLKETPAYQHFFLTAFFQKTL 276
>sp|Q2GC97|TILS_NOVAD tRNA(Ile)-lysidine synthase OS=Novosphingobium aromaticivorans
(strain DSM 12444) GN=tilS PE=3 SV=1
Length = 326
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 102/211 (48%), Gaps = 28/211 (13%)
Query: 79 LKPHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKE 138
L P R+ L VSGGPDS+AL +L Q +F TVDHGLR ES
Sbjct: 22 LDPSGRVCLAVSGGPDSLALMLLM---------QEVAPRDFC----VATVDHGLRAESAA 68
Query: 139 EANIVSHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIA 198
EA +V+ GI +R D G +QE AR RY + + + ++ A
Sbjct: 69 EAAMVAGLCEMRGIAYHTLRLDLAGG----SAVQERARKARYAALADLARRDGLSAVVTA 124
Query: 199 HHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFSK 258
HHADDQAE ++RL+R +G+ GLAGM +S + + + L+RPLL + +
Sbjct: 125 HHADDQAETLVMRLNRGAGLRGLAGMRAASSVPGA-----------GEVRLLRPLLGWRR 173
Query: 259 DDMYKICQGGNRDWVEDPTNRSPLFVRNRIR 289
++ + + V DP+N + R RIR
Sbjct: 174 AELVALVEDAGLAPVLDPSNHDHRYERVRIR 204
>sp|Q65PF4|TILS_BACLD tRNA(Ile)-lysidine synthase OS=Bacillus licheniformis (strain DSM
13 / ATCC 14580) GN=tilS PE=3 SV=1
Length = 476
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 118/263 (44%), Gaps = 30/263 (11%)
Query: 88 GVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLR-EESKEEANIVSHR 146
GVSGGPDSMAL L A T + L+A VDH R EES+ + V
Sbjct: 23 GVSGGPDSMAL--LHALHHTVPASAT---------LIAAHVDHMFRGEESERDMRFVQDY 71
Query: 147 VSDMGIRCEIVRCDWLDGRPKQG-HLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADDQA 205
GI+CE V+ D L + + Q AAR+ RY FQ++ +H+ L++ HH DDQ
Sbjct: 72 CEAEGIQCEAVQIDVLAFAAENNLNKQAAARECRYAFFQELMKRHRAEYLVLGHHGDDQV 131
Query: 206 ELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFSKDDMYKIC 265
E ++++++ + +GLAG+ + S + L+RP L SKDD+ C
Sbjct: 132 ETMLMKMAKGTVGIGLAGIQPKRRFDSGW--------------LLRPFLKLSKDDLLAYC 177
Query: 266 QGGNRDWVEDPTNRSPLFVRNRIR---MSLGDLSSCSFKSELQAVISACRRTRSYVEHVC 322
+ + DP+N + RNR R + S Q+V Y++ +
Sbjct: 178 KENRIPFRTDPSNSEDDYTRNRFRHHVLPFLKKESEDVHKRFQSVSEFLTEDELYLQALT 237
Query: 323 SNLINEAVTVMDQGYAVIDLEIL 345
+ +N +T I +E L
Sbjct: 238 KDKMNTVITSKSSSGVEISIERL 260
>sp|Q88Z33|TILS_LACPL tRNA(Ile)-lysidine synthase OS=Lactobacillus plantarum (strain ATCC
BAA-793 / NCIMB 8826 / WCFS1) GN=tilS PE=3 SV=1
Length = 448
Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 113/224 (50%), Gaps = 29/224 (12%)
Query: 68 EAFSRRMAMAGL-KPHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAI 126
+ F+R++A A L P + + VS G DSM L L Q A E ++A
Sbjct: 5 QKFNRQLAAAKLLSPQQTVVVAVSTGVDSMVLLHLL---------QRLPAAERPRVVVA- 54
Query: 127 TVDHGLREESKEEANIVSHRVSDMGIRCEIVRCDWLDG-RPKQGHLQEAARDMRYRLFQK 185
V+H LRE+S+ EA+ + ++ +V DWL PK G ++ A R RY +F K
Sbjct: 55 HVNHHLREQSQMEADYLRQYCQQQNLK--LVMADWLPAAHPKSG-IEAAGRQFRYHVFAK 111
Query: 186 VCIQHQIGVLLIAHHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNH 245
V +++ +L AHHA+DQ E ++++L+R + L G+A +S+ F++
Sbjct: 112 VMRENRATAVLTAHHANDQVETYLMKLARGGDISQLTGIA-TSRPFATGR---------- 160
Query: 246 SILLVRPLLDFSKDDMYKICQGGNRDWVEDPTNRSPLFVRNRIR 289
L+RPLL +SKD + + + ED TN+ RNRIR
Sbjct: 161 ---LIRPLLTWSKDQLRNYAAEQHVVYFEDVTNQDVALTRNRIR 201
>sp|Q63HD6|TILS_BACCZ tRNA(Ile)-lysidine synthase OS=Bacillus cereus (strain ZK / E33L)
GN=tilS PE=3 SV=1
Length = 476
Score = 95.9 bits (237), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 101/213 (47%), Gaps = 26/213 (12%)
Query: 79 LKPHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLR-EESK 137
LK H I +GVSGGPDS+AL + A +F ++ VDH R +ES
Sbjct: 19 LKEHSTIVVGVSGGPDSLALLYYLL--------EKRAAKQF--EIVVAHVDHMFRGDESH 68
Query: 138 EEANIVSHRVSDMGIRCEIVRCDWLDGRPKQG-HLQEAARDMRYRLFQKVCIQHQIGVLL 196
E+ V +G+ CE +R + + + G + Q AAR+ RY +++ ++ +
Sbjct: 69 EDLQFVQDLCKGLGVICETIRINVSQYQQQYGMNAQVAARECRYAFLERIMKKYDARYVA 128
Query: 197 IAHHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDF 256
+ HH DDQ E ++RL R S G AG+A + Y L+RPLL
Sbjct: 129 LGHHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNGY--------------LIRPLLGV 174
Query: 257 SKDDMYKICQGGNRDWVEDPTNRSPLFVRNRIR 289
+K+++ C DP+N+ ++ RNR+R
Sbjct: 175 TKEEIVDYCNKLKIIPRIDPSNKKEVYTRNRLR 207
>sp|Q81J84|TILS_BACCR tRNA(Ile)-lysidine synthase OS=Bacillus cereus (strain ATCC 14579 /
DSM 31) GN=tilS PE=3 SV=1
Length = 476
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 104/213 (48%), Gaps = 26/213 (12%)
Query: 79 LKPHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLR-EESK 137
LK I +GVSGGPDS+AL + A + ++ ++A VDH R +ES
Sbjct: 19 LKNDSTIVVGVSGGPDSLALLY---------YLLEKRAEKQLEIVVA-HVDHMFRGDESY 68
Query: 138 EEANIVSHRVSDMGIRCEIVRCDWLDGRPKQG-HLQEAARDMRYRLFQKVCIQHQIGVLL 196
E+ V ++GI CE +R + + + G + Q AAR+ RY +++ ++ +
Sbjct: 69 EDLQFVQGLCEELGIICETIRINVSQYQQQYGMNAQVAARECRYAFLERIMKKYDARYVA 128
Query: 197 IAHHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDF 256
+ HH DDQ E ++RL R S G AG+A + Y L+RPLL
Sbjct: 129 LGHHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNGY--------------LIRPLLGV 174
Query: 257 SKDDMYKICQGGNRDWVEDPTNRSPLFVRNRIR 289
+K+++ C N DP+N+ ++ RNR+R
Sbjct: 175 TKEEIVDYCNKLNLMPRIDPSNKKEVYTRNRLR 207
>sp|Q73FE5|TILS_BACC1 tRNA(Ile)-lysidine synthase OS=Bacillus cereus (strain ATCC 10987)
GN=tilS PE=3 SV=1
Length = 476
Score = 93.6 bits (231), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 101/213 (47%), Gaps = 26/213 (12%)
Query: 79 LKPHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLR-EESK 137
LK I +GVSGGPDS+AL + A +F ++ VDH R +ES
Sbjct: 19 LKERSTIVVGVSGGPDSVALLYYLL--------EKRAAKQF--EIVVAHVDHMFRGDESH 68
Query: 138 EEANIVSHRVSDMGIRCEIVRCDWLDGRPKQG-HLQEAARDMRYRLFQKVCIQHQIGVLL 196
E+ V ++G+ CE +R + + + G + Q AAR+ RY +++ ++ +
Sbjct: 69 EDLQFVQDLCKELGVICETIRINVSQYQQQYGMNAQVAARECRYAFLERIMKKYDARYVA 128
Query: 197 IAHHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDF 256
+ HH DDQ E ++RL R S G AG+A + Y L+RPLL
Sbjct: 129 LGHHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNGY--------------LIRPLLGV 174
Query: 257 SKDDMYKICQGGNRDWVEDPTNRSPLFVRNRIR 289
+K+++ C DP+N+ ++ RNR+R
Sbjct: 175 TKEEIVDYCHKLKIIPRIDPSNKKEVYTRNRLR 207
>sp|Q81VX7|TILS_BACAN tRNA(Ile)-lysidine synthase OS=Bacillus anthracis GN=tilS PE=3 SV=1
Length = 476
Score = 93.2 bits (230), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 100/213 (46%), Gaps = 26/213 (12%)
Query: 79 LKPHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLR-EESK 137
LK I +GVSGGPDS+AL + A +F ++ VDH R +ES
Sbjct: 19 LKERSTIVVGVSGGPDSLALLYYLL--------EKRAAKQF--EIVVAHVDHMFRGDESH 68
Query: 138 EEANIVSHRVSDMGIRCEIVRCDWLDGRPKQG-HLQEAARDMRYRLFQKVCIQHQIGVLL 196
E+ V +G+ CE +R + + + G + Q AAR+ RY +++ ++ +
Sbjct: 69 EDLQFVQDLCKGLGVICETIRINVSQYQKQYGMNAQVAARECRYAFLERIMKKYDARYVA 128
Query: 197 IAHHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDF 256
+ HH DDQ E ++RL R S G AG+A + Y L+RPLL
Sbjct: 129 LGHHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNGY--------------LIRPLLGV 174
Query: 257 SKDDMYKICQGGNRDWVEDPTNRSPLFVRNRIR 289
+K+++ C DP+N+ ++ RNR+R
Sbjct: 175 TKEEIVNYCNELKIIPRIDPSNKKEVYTRNRLR 207
>sp|Q7N8N0|TILS_PHOLL tRNA(Ile)-lysidine synthase OS=Photorhabdus luminescens subsp.
laumondii (strain TT01) GN=tilS PE=3 SV=1
Length = 442
Score = 92.8 bits (229), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 131/284 (46%), Gaps = 51/284 (17%)
Query: 79 LKPHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKE 138
L + +I +G SGG DS L L W+ NQ+ + + L AI + HGL ++ +
Sbjct: 16 LGEYKKILVGFSGGLDSSVLLHLLVNWR----NQHNQKIQ----LRAIHIHHGLNLKADQ 67
Query: 139 EANIVSHRVSDMGIRCEIVRCDW----------LDGRPKQGHLQEAARDMRYRLFQKVCI 188
+ H C+++ DW +D R Q ++ AARD RY++F+
Sbjct: 68 ---WIEH--------CQLICDDWQVEFHSARVTIDAR--QKGIEAAARDARYQVFKSELQ 114
Query: 189 QHQIGVLLIAHHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSIL 248
+ + VL+ A H DDQAE F+L L R SG GLA M S +F+ L
Sbjct: 115 KDE--VLVTAQHLDDQAETFLLALKRGSGPAGLASMP-SIAVFAD-------------TL 158
Query: 249 LVRPLLDFSKDDMYKICQGGNRDWVEDPTNRSPLFVRNRIR---MSLGDLSSCSFKSELQ 305
L+RPLLD+S++++ K +W+ED +N+ + RN +R M L + F
Sbjct: 159 LLRPLLDYSRNELEKYASKHRLNWIEDDSNQDDRYDRNFLRLHIMPLLNQRWSHFPKAAA 218
Query: 306 AVISACRRTRSYVEHVCSNLINEAVTVMDQGYAVIDLEILNPSK 349
S C ++ + + + E +T D ++ L + + +K
Sbjct: 219 RSASLCGEQEQLLDELLNESLKELIT-QDGALGIVSLAVCSEAK 261
>sp|Q6HPV4|TILS_BACHK tRNA(Ile)-lysidine synthase OS=Bacillus thuringiensis subsp.
konkukian (strain 97-27) GN=tilS PE=3 SV=1
Length = 476
Score = 92.8 bits (229), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 100/213 (46%), Gaps = 26/213 (12%)
Query: 79 LKPHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLR-EESK 137
LK I +GVSGGPDS+AL + A +F ++ VDH R +ES
Sbjct: 19 LKERSTIVVGVSGGPDSLALLYYLL--------EKRAAKQF--EIVVAHVDHMFRGDESH 68
Query: 138 EEANIVSHRVSDMGIRCEIVRCDWLDGRPKQG-HLQEAARDMRYRLFQKVCIQHQIGVLL 196
E+ V +G+ CE +R + + + G + Q AAR+ RY +++ ++ +
Sbjct: 69 EDLQFVQDLCKGLGVICETIRINVSQYQKQYGMNAQVAARECRYAFLERIMKKYDARYVA 128
Query: 197 IAHHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDF 256
+ HH DDQ E ++RL R S G AG+A + Y L+RPLL
Sbjct: 129 LGHHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNGY--------------LIRPLLGV 174
Query: 257 SKDDMYKICQGGNRDWVEDPTNRSPLFVRNRIR 289
+K+++ C DP+N+ ++ RNR+R
Sbjct: 175 TKEEIVNYCNELKIIPRIDPSNKKEVYTRNRLR 207
>sp|Q10441|TILS_SCHPO Probable tRNA(Ile)-lysidine synthase OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC12B10.08c PE=3 SV=1
Length = 456
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 109/236 (46%), Gaps = 17/236 (7%)
Query: 62 DMTKYREAFSRRMAMAGLKPHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFID 121
D K +E ++ +++ H R+ + VSGG DSM L + G +FI
Sbjct: 2 DTIKLKEFYNSLVSIRRRVGHRRLGIAVSGGVDSMLLSWFMKESQI----MFGWPNQFI- 56
Query: 122 GLLAITVDHGLREESKEEANIVSHRVSDMGIRCEIVRCDW-LDGRPKQGHLQEAARDMRY 180
A VDH +R+ S EEA ++ M I + +W D +L+ AR+ RY
Sbjct: 57 ---AFVVDHRIRKNSTEEALQTIWNLNRMLIPNVYLNINWGNDDVHSLTNLETIAREHRY 113
Query: 181 RLFQKVCIQHQIGVLLIAHHADDQAELFILR-LSRNSGVL-GLAGMAFSSQIFSSYAYSC 238
++ + CI H I + AHHA+DQAE +R L R G GL M SQI S +
Sbjct: 114 QVLTRACITHNIRHICTAHHANDQAETIFMRLLRRKPGTWGGLCAMKPVSQIPESDSICG 173
Query: 239 HDDLKNHSILLVRPLLDFSKDDMYKICQGGNRDWVEDPTNRS-PLFVRNRIRMSLG 293
+++ L+RPLL + K+ + + W EDPTN L RN IR L
Sbjct: 174 ASNIE-----LLRPLLPYYKNQILNTAKQHGIAWEEDPTNADINLTPRNAIRRFLN 224
>sp|P37563|TILS_BACSU tRNA(Ile)-lysidine synthase OS=Bacillus subtilis (strain 168)
GN=tilS PE=1 SV=2
Length = 472
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 30/252 (11%)
Query: 85 IALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLR-EESKEEANIV 143
I +GVSGGPDSMAL L A G + N ++A VDH R ES+E+ V
Sbjct: 20 IIVGVSGGPDSMAL--LHALHTLCGRSAN---------VIAAHVDHRFRGAESEEDMRFV 68
Query: 144 SHRVSDMGIRCEIVRCDWLDGRPKQG-HLQEAARDMRYRLFQKVCIQHQIGVLLIAHHAD 202
+ CE + + ++G + Q AARD RY+ F+++ +HQ L +AHH D
Sbjct: 69 QAYCKAEQLVCETAQINVTAYAQEKGLNKQAAARDCRYQFFEEIMSKHQADYLALAHHGD 128
Query: 203 DQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFSKDDMY 262
DQ E +++L++ + GLAGM + + ++RP L +K+++
Sbjct: 129 DQVETMLMKLAKGTLGTGLAGMQPVRRFGTGR--------------IIRPFLTITKEEIL 174
Query: 263 KICQGGNRDWVEDPTNRSPLFVRNRIRMSLGDL---SSCSFKSELQAVISACRRTRSYVE 319
C + D +N + RNR R ++ S Q V A +++
Sbjct: 175 HYCHENGLSYRTDESNAKDDYTRNRFRKTVLPFLKQESPDVHKRFQKVSEALTEDEQFLQ 234
Query: 320 HVCSNLINEAVT 331
+ + +N+ +T
Sbjct: 235 SLTKDEMNKVIT 246
>sp|Q181G3|TILS_CLOD6 tRNA(Ile)-lysidine synthase OS=Clostridium difficile (strain 630)
GN=tilS PE=3 SV=1
Length = 462
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 130/266 (48%), Gaps = 33/266 (12%)
Query: 84 RIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLRE-ESKEEANI 142
+I LG+SGGPDS+ L + K +F + A ++H +R E++++A
Sbjct: 21 KIVLGLSGGPDSVCLLHVLNRLKK----------DFNIEIYAAHLNHQIRGIEAQKDALY 70
Query: 143 VSHRVSDMGIRCEIVRCDWLDGRPKQG-HLQEAARDMRYRLFQKVCIQHQIGVLLIAHHA 201
VS DMGI + + +G L+E AR +RY +F ++ + + + I H+
Sbjct: 71 VSKLCEDMGIIFFVKSINVPKYCENEGLSLEEGARKLRYEMFYEIKDKIKANKIAIGHNL 130
Query: 202 DDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFSKDDM 261
+DQAE ++R+ R +G+ GL G+ + +C ++RP+LD ++++
Sbjct: 131 NDQAETVMMRIMRGTGLKGLKGIDYIRD-------NC----------IIRPILDVERNEI 173
Query: 262 YKICQGGNRDWVEDPTNRSPLFVRNRIRMSLGDLSSCSFKSE-LQAVI---SACRRTRSY 317
+ C+ N + D TN ++ RN+IR+ L +F S +++++ ++ + Y
Sbjct: 174 EEYCEAYNLNPRIDKTNLENIYTRNKIRLDLLPYMKDNFNSNVIESIVRMSNSLKSDNDY 233
Query: 318 VEHVCSNLINEAVTVMDQGYAVIDLE 343
+E E + ++G+ I+L+
Sbjct: 234 IEKEAEAKFREVSNIKEKGFVEINLD 259
>sp|B8IP16|TILS_METNO tRNA(Ile)-lysidine synthase OS=Methylobacterium nodulans (strain
ORS2060 / LMG 21967) GN=tilS PE=3 SV=1
Length = 339
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 103/232 (44%), Gaps = 30/232 (12%)
Query: 67 REAFSRRM-AMAGLKPHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLA 125
RE F+RR+ G + L VSGGPDS AL GG + + ++
Sbjct: 10 REEFARRLDRWLGPGAAGGVVLAVSGGPDSTALM--------GGAARL----PPLVPVMV 57
Query: 126 ITVDHGLREESKEEANIVSHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQK 185
TVDHGLR E+ EA V+ +G+ I+ W +P+ LQEAAR RYRL
Sbjct: 58 ATVDHGLRPEAAAEAEAVARLAGRLGLPHRIL--AWTGPKPRT-RLQEAARAARYRLLLD 114
Query: 186 VCIQHQIGVLLIAHHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNH 245
+ + LL AH DDQAE ++RL SG GL G+ +
Sbjct: 115 LAREQGAAALLTAHTLDDQAETVLMRLCAGSGPAGLGGIEPVRHL--------------G 160
Query: 246 SILLVRPLLDFSKDDMYKICQGGNRDWVEDPTNRSPLFVRNRIRMSLGDLSS 297
+ LVRP LD K + C +V DP N F R R+R + L++
Sbjct: 161 GLALVRPFLDLPKARLVATCAAEGWPFVVDPGNADARFARGRLRRVMPHLAA 212
>sp|Q5L3T3|TILS_GEOKA tRNA(Ile)-lysidine synthase OS=Geobacillus kaustophilus (strain
HTA426) GN=tilS PE=1 SV=1
Length = 464
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 105/255 (41%), Gaps = 37/255 (14%)
Query: 85 IALGVSGGPDSMALC----VLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLR-EESKEE 139
+ +GVSGGPDS+AL L WK ++A VDH R ES+EE
Sbjct: 21 VIVGVSGGPDSLALLHVFLSLRDEWKLQ--------------VIAAHVDHMFRGRESEEE 66
Query: 140 ANIVSHRVSDMGIRCEIVRCDWLDGRPKQG-HLQEAARDMRYRLFQKVCIQHQIGVLLIA 198
V + I CE + D + G QEAAR RYR F ++ +HQ G + +
Sbjct: 67 MEFVKRFCVERRILCETAQIDVPAFQRSAGLGAQEAARICRYRFFAELMEKHQAGYVAVG 126
Query: 199 HHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFSK 258
HH DDQ E ++RL R S G AG+ Y L+RP L S+
Sbjct: 127 HHGDDQVETILMRLVRGSTSKGYAGIPVKRPFHGGY--------------LIRPFLAVSR 172
Query: 259 DDMYKICQGGNRDWVEDPTNRSPLFVRNRIRMSLGDL---SSCSFKSELQAVISACRRTR 315
++ C+ DP+N + RNR R + L + Q
Sbjct: 173 AEIEAYCRQMGLSPRCDPSNEKDDYTRNRFRHHIVPLLRQENPRLHERFQQYSEMMAEDE 232
Query: 316 SYVEHVCSNLINEAV 330
++E + ++ +N+ +
Sbjct: 233 QFLEELAADALNKVM 247
>sp|Q9ZGE2|TILS_HELMO tRNA(Ile)-lysidine synthase OS=Heliobacillus mobilis GN=tilS PE=3
SV=1
Length = 470
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 106/234 (45%), Gaps = 34/234 (14%)
Query: 63 MTKYREAFSRRMAMAGL-KPHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFID 121
M + FS+ + G+ KP RI + +SGG DS+ L +L F + + +F
Sbjct: 1 MNHLLQRFSQSLCRLGINKPRERIVIALSGGADSVCLLLL--------FKKV--SPQFGI 50
Query: 122 GLLAITVDHGLR-EESKEEANIVSHRVSDMGIRC--EIVRCDWLDGRPKQGHLQEAARDM 178
L A +HG+R +ES E+A V+ + + + E W P G EAAR +
Sbjct: 51 ELAAAHYNHGMRGKESDEDAAFVAELTNRLQVPLFLETAPLKWWQQEP--GTKMEAARRL 108
Query: 179 RYRLFQKVCIQHQIGVLLIAHHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSC 238
RY + Q + +AHHADD AE + + R SG+ GL+G+ F
Sbjct: 109 RYDFLSRSAEQAGARWIALAHHADDMAETVLFHMLRGSGIKGLSGIPAKRGPF------- 161
Query: 239 HDDLKNHSILLVRPLLDFSKDDMYKICQGGNRDWVEDPTNRSPLFVRNRIRMSL 292
VRPLL F + ++ + + + W D +N S ++ RNRIR +
Sbjct: 162 -----------VRPLLPFRRKELEEFLKAEGQHWRHDSSNDSDVYTRNRIRHQI 204
>sp|Q5WAE0|TILS_BACSK tRNA(Ile)-lysidine synthase OS=Bacillus clausii (strain KSM-K16)
GN=tilS PE=3 SV=1
Length = 469
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 105/216 (48%), Gaps = 36/216 (16%)
Query: 85 IALGVSGGPDSMALCVLTAG----WKTGGFNQNGEAGEFIDGLLAITVDHGLR-EESKEE 139
+ + VSGGPDSMAL + A WK L + V+H LR EES ++
Sbjct: 21 VLVAVSGGPDSMALLAIMANLREKWKLN--------------LFGVHVNHRLRGEESNKD 66
Query: 140 ANIVSHRVSDMGIRCEIVRCDWLDGRPKQGHL--QEAARDMRYRLFQKVCIQHQIGVLLI 197
A +V + +G+ C + D + + H+ Q+AAR +RY++FQ + VLL
Sbjct: 67 AELVQSFSARLGVPCNVKDVD-VAAFKAEHHVGTQQAARALRYQVFQGEMERVHATVLLT 125
Query: 198 AHHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFS 257
AHH DD+ E ++L+R + L G+A +++ F++ +L RPLL+ +
Sbjct: 126 AHHGDDEVETAFMKLTRGTTPLTKLGIA-ATRPFANG-------------VLARPLLEET 171
Query: 258 KDDMYKICQGGNRDWVEDPTNRSPLFVRNRIRMSLG 293
K + C + D +N S + RNR RM++
Sbjct: 172 KRSIVAYCHEKAIPYRIDQSNFSDAYTRNRFRMNMA 207
>sp|Q92JY3|TILS_RHIME tRNA(Ile)-lysidine synthase OS=Rhizobium meliloti (strain 1021)
GN=tilS PE=3 SV=1
Length = 453
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 93/213 (43%), Gaps = 22/213 (10%)
Query: 84 RIALGVSGGPDSMALCVL----TAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEE 139
RI + VSGG DSM L V A + GF+ L A TVDH LR +S E
Sbjct: 21 RILVAVSGGSDSMGLLVALHSAIAADERRGFS-----------LAACTVDHALRPQSACE 69
Query: 140 ANIVSHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAH 199
A V+ + +GI I C W +P G +Q AAR+ RY L + + I H
Sbjct: 70 AEDVAAFCAALGIAHRI--CRWEGAKPSTG-IQAAARNKRYELLAEAADALGADCIAIGH 126
Query: 200 HADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFSKD 259
DDQ E +R++R G G A L I ++RP L ++
Sbjct: 127 TRDDQQETVAMRIARGKG----DGAGDGQGEGHGGAGMAASMLYGRRIWVLRPFLGLARA 182
Query: 260 DMYKICQGGNRDWVEDPTNRSPLFVRNRIRMSL 292
++ Q W++DP+N +P F R R+R +
Sbjct: 183 EIRSFLQARGVSWIDDPSNANPAFERVRVRARI 215
>sp|Q6AJ19|TILS_DESPS tRNA(Ile)-lysidine synthase OS=Desulfotalea psychrophila (strain
LSv54 / DSM 12343) GN=tilS PE=3 SV=1
Length = 471
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 107/217 (49%), Gaps = 34/217 (15%)
Query: 79 LKPHHRIALGVSGGPDSMALC-VLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLR-EES 136
LK +I +GVSGG DS+AL +LT N + + L+AI +DHGLR +E
Sbjct: 25 LKSGDKIIVGVSGGADSIALLHILTE------LNLDLQ-------LIAIYIDHGLRPDEI 71
Query: 137 KEEANIVSHRVSDMGIRCEIVRCDWLDGRP-KQGHLQEAARDMRYRLFQKVCIQHQIGVL 195
+E + V + +G E + D L + + ++AAR +RY+ F + ++ +
Sbjct: 72 PQEISFVKGQAGAVGAEFESISVDVLALKNCDKLSTEDAARRLRYQAFAEARERYGAKYI 131
Query: 196 LIAHHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLD 255
++AH+ADDQ E F +RL R SG GL+GM + + + S
Sbjct: 132 MVAHNADDQVEEFFIRLLRGSGRRGLSGMPYQNGLLLRPLLSL----------------- 174
Query: 256 FSKDDMYKICQGGNRDWVEDPTNRSPLFVRNRIRMSL 292
+K D+ Q D ED +NR P ++RNRIR+ L
Sbjct: 175 -TKADLLLYLQERGIDHCEDSSNREPCYLRNRIRLDL 210
>sp|Q9HXZ3|TILS_PSEAE tRNA(Ile)-lysidine synthase OS=Pseudomonas aeruginosa (strain ATCC
15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=tilS PE=3
SV=1
Length = 442
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 104/235 (44%), Gaps = 34/235 (14%)
Query: 118 EFIDGLLAITVDHGLREESKEEANIVSHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARD 177
E + L A+ V HGL+ + +GI + R G G +++AARD
Sbjct: 47 EALPALSALHVHHGLQAAADGWPAHCQAVCRSLGIPLRVERVQVAVG----GSIEQAARD 102
Query: 178 MRYRLFQKVCIQHQIGVLLIAHHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYS 237
RYR FQ + Q VLL A H DDQAE + RL R +G+ GLA M S +
Sbjct: 103 ARYRAFQANLGEGQ--VLLTAQHLDDQAETLLFRLLRGAGLRGLAAMPASRPLGGGR--- 157
Query: 238 CHDDLKNHSILLVRPLLDFSKDDMYKICQGGNRDWVEDPTNRSPLFVRNRIRMSLGDLSS 297
L RPLL S+ ++ Q DWVEDP+N+ P F RN +R + +
Sbjct: 158 -----------LCRPLLGVSRAELEAYAQAHRLDWVEDPSNQDPRFSRNYLRREIMPRLA 206
Query: 298 CSFKSELQAVISACRRTRSYVEHVCSNLINEAVTVMDQGYAVIDLEI-LNPSKIE 351
+ QAV R C+ + EA ++ + A IDL PS+++
Sbjct: 207 SHWP---QAVAGMAR---------CAAHLREAEDLLAE-LAAIDLRACRQPSELD 248
>sp|B7IFR8|TILS_THEAB tRNA(Ile)-lysidine synthase OS=Thermosipho africanus (strain
TCF52B) GN=tilS PE=3 SV=1
Length = 427
Score = 86.7 bits (213), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 79 LKPHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKE 138
++ + RI + VSGG DS L L A + E +F + TVDHG+R+ESKE
Sbjct: 18 IEENDRILVAVSGGVDSSVLLNLLA--------RVQEYFKF--SIFCATVDHGIRKESKE 67
Query: 139 EANIVSHRVSDMGIRCEIVRCDW-LDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLI 197
E V + + + C I D L + + ++EAAR +RY+ ++ + +
Sbjct: 68 EVKFVYNMAQSLNVECFIKEFDVPLYAKENKLSIEEAARKLRYKFLNEIAKKINANKVAT 127
Query: 198 AHHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFS 257
AH+ +D AE + RL+R +G G+ GM K + ++RPLL F
Sbjct: 128 AHNLNDLAETVLFRLARGTGPFGIYGM------------------KPRNGNIIRPLLFFE 169
Query: 258 KDDMYKICQGGNRDWVEDPTNRSPLFVRNRIRMSL 292
+ ++ + +V D TN + RN IR +
Sbjct: 170 RKEIEQFATENKIPFVVDKTNFDTKYTRNFIRHKI 204
>sp|B1YGQ4|TILS_EXIS2 tRNA(Ile)-lysidine synthase OS=Exiguobacterium sibiricum (strain
DSM 17290 / JCM 13490 / 255-15) GN=tilS PE=3 SV=1
Length = 414
Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 124/283 (43%), Gaps = 42/283 (14%)
Query: 81 PHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEA 140
P + + VSGG DSM L L + N + L+ + V HGLR+ES EEA
Sbjct: 8 PKEPLLVAVSGGCDSMVLAHLL-------YEANHD-------LMIVHVHHGLRKESDEEA 53
Query: 141 NIVSHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHH 200
V + + R +W P Q A R RY FQ+V + L++AHH
Sbjct: 54 EAVRAWAEARRVGIRMTRLEWEGQAPSQA----ACRTRRYAFFQEVMAETGRRHLVLAHH 109
Query: 201 ADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFSKDD 260
DDQ E +++L R G AG+ +I S H RPLL +SK
Sbjct: 110 RDDQLETLLIQLIR-----GEAGVDGIPRIRSFATGQIH-----------RPLLPYSKQQ 153
Query: 261 MYKICQGGNRDWVEDPTNRSPLFVRNRIRMS----LGDLSSCSFKSELQAVISACRRTRS 316
+Y + W ED TN ++RN++R L +L ++ +QA + + +
Sbjct: 154 LYDYAKARQVVWHEDETNAGTKYLRNQMRHRLLPLLAELRPGYEEATVQAAMVRYEQKQE 213
Query: 317 YVEHVCSNLINEAVTVMDQGYAVIDLEILNPSKIEDIFLSKFL 359
++++V S + E +T D+G + ++ L P+ + L L
Sbjct: 214 HLKYVTS-YVKEQMT--DRGLPLEAIQKL-PTDFRRLVLRALL 252
>sp|Q724J4|TILS_LISMF Bifunctional protein TilS/HprT OS=Listeria monocytogenes serotype
4b (strain F2365) GN=tilS/hprT PE=3 SV=1
Length = 648
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 99/216 (45%), Gaps = 27/216 (12%)
Query: 79 LKPHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKE 138
++ ++ + VSGGPDS+AL L W N N E I ++H LRE +
Sbjct: 18 IRSDDKLLVAVSGGPDSLAL--LHFLW-----NSNLVPKEAIS---VAHLNHHLRENAAN 67
Query: 139 EANIVSHRVSDMGIRCEIVRCDWLDGRPK--QGHLQEAARDMRYRLFQKVCIQHQIGVLL 196
E N+V GI I D + R + Q ++E AR +RY F+KV + +I L
Sbjct: 68 EQNVVETFCESQGIPFYIEEVD-VKSRAESLQKGIEETARIVRYDFFEKVMAEKKINKLA 126
Query: 197 IAHHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDF 256
+AHHADDQ E ++RL R S +G +G+ ++ A +RP L
Sbjct: 127 LAHHADDQIETILMRLVRGSASIGWSGIQPKRELKGGQA--------------IRPFLPI 172
Query: 257 SKDDMYKICQGGNRDWVEDPTNRSPLFVRNRIRMSL 292
+K ++ Q + D +N S + RNR R L
Sbjct: 173 TKAEIIDYAQKHELAYEIDESNTSQEYTRNRYRAQL 208
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 243,174,727
Number of Sequences: 539616
Number of extensions: 10224664
Number of successful extensions: 23129
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 285
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 22214
Number of HSP's gapped (non-prelim): 418
length of query: 676
length of database: 191,569,459
effective HSP length: 124
effective length of query: 552
effective length of database: 124,657,075
effective search space: 68810705400
effective search space used: 68810705400
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)