BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005805
(676 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8BXQ2|PIGT_MOUSE GPI transamidase component PIG-T OS=Mus musculus GN=Pigt PE=1 SV=2
Length = 582
Score = 291 bits (744), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 203/622 (32%), Positives = 303/622 (48%), Gaps = 87/622 (13%)
Query: 37 QGGGEEFSEELLLKPFPDRKVLAHFHFQSR--APHSSSHGRHHHLFPKAIAQLVKKFRVK 94
+G + EEL++ P P V A F F++R + H+ LFPKA+ QL+ K+ ++
Sbjct: 28 EGPRDSLREELVITPLPSGDVAATFQFRTRWDSDLQREGVSHYRLFPKALGQLISKYSLR 87
Query: 95 EMELSFTQGRWRYEQWGGFDPLSSNNAKPPGVELWAVFDVPQSLVDVYWRNLTHTLSGLF 154
E+ LSFTQG WR WG P P G ELW F + VD WR L++ LSG+F
Sbjct: 88 ELHLSFTQGFWRTRYWG--PPFLQ---APSGAELWVWFQDTVTDVDKSWRELSNVLSGIF 142
Query: 155 CASINFLESSTTYSAPELTFKP-SFGN------LRYGTLPREAVCTENLTPWLKLLPCRD 207
CAS+NF++++ T + P +FKP N LRY LPRE VCTENLTPW KLLPC
Sbjct: 143 CASLNFIDATNTVT-PTASFKPLGLANDTDDYFLRYAVLPREVVCTENLTPWKKLLPCSS 201
Query: 208 KAGLSALMDRPSIYRGFYHSQRLRLTSSESGSDEVDSGIGLDQTLTVVLQPSSWRTGKTY 267
KAGLS L+ ++ YHSQ + + + L QTL+VV ++ TG+
Sbjct: 202 KAGLSVLLKADRLFHTSYHSQAVHIRPICRNAHCTSISWELRQTLSVVFD--AFITGQG- 258
Query: 268 SVETNIQPSWSISSIFGRNIPGKCVIAKSSNVYLQLDNGLVGELKNLERENAKYVANTFE 327
+ WS+ +F R + C +A S VY+ +
Sbjct: 259 ------KKDWSLFRMFSRTLTEACPLASQSLVYVDI------------------------ 288
Query: 328 SEGF-QSNHAFKISVTPDKVFEEVDNLHGKSTSVIYGFSVEKYSDSQPFDLGLTWKIPVV 386
G+ Q N ++S P +++V K+ +V F ++S+ ++ L WK P
Sbjct: 289 -TGYSQDNETLEVSPPPTSTYQDVILGTRKTYAVYDLFDTAMINNSRNLNIQLKWKRPPD 347
Query: 387 WSCQQAP-LHASRFLMGSGNERGAIAISLEPTESSEGLPTSHIIDGRCELRVDIFQVVPW 445
P LHA R++ G G ++G ++ L + P V + VVPW
Sbjct: 348 NEALPVPFLHAQRYVSGYGLQKGELSTLLYNSHPYRAFP------------VLLLDVVPW 395
Query: 446 YIKVYFHTLQVFVDKQPRAMADVVDKIRVSPSKDKVSPGVMEMILKLPCGSKSAAFSLEF 505
Y+++Y HTL + + + I P++D+ P ++EM+++LP S + S++F
Sbjct: 396 YLRLYVHTLTI----TSKGKENKPSYIHYQPAQDRQQPHLLEMLIQLPANSVTKV-SIQF 450
Query: 506 DKGFLHIDEYPPDANQGFDIPSALIS--FPSFNARMNFSEDEFLNNSPILSKFQETSP-- 561
++ L EY PD N GF + +++S PS A + SP+ + S
Sbjct: 451 ERALLKWTEYTPDPNHGFYVSPSVLSALVPSVVAAKPVDWE----GSPLFNTLFPVSDGS 506
Query: 562 ---VLSYTEVLLIPLTTPDFSMPYNVITITCTVFALYFGSLLNVLRRRVDEEERILRSRA 618
V YTE LL+ L TPDFSMPYNVI +TCTV A+ +GS N+L R EE
Sbjct: 507 SYFVRLYTEPLLVNLPTPDFSMPYNVICLTCTVVAVCYGSFYNLLTRTFHIEE------- 559
Query: 619 GHKAGWISQLLSRLSAKLRGRP 640
K+G +++ L+ L + RG P
Sbjct: 560 -PKSGGLAKRLANLIRRARGVP 580
>sp|Q969N2|PIGT_HUMAN GPI transamidase component PIG-T OS=Homo sapiens GN=PIGT PE=1 SV=1
Length = 578
Score = 289 bits (740), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 203/624 (32%), Positives = 302/624 (48%), Gaps = 87/624 (13%)
Query: 35 LKQGGGEEFSEELLLKPFPDRKVLAHFHFQSR--APHSSSHGRHHHLFPKAIAQLVKKFR 92
L + + EEL++ P P V A F F++R + H+ LFPKA+ QL+ K+
Sbjct: 22 LAEPPRDSLREELVITPLPSGDVAATFQFRTRWDSELQREGVSHYRLFPKALGQLISKYS 81
Query: 93 VKEMELSFTQGRWRYEQWGGFDPLSSNNAKPPGVELWAVFDVPQSLVDVYWRNLTHTLSG 152
++E+ LSFTQG WR WG P P G ELW F + VD W+ L++ LSG
Sbjct: 82 LRELHLSFTQGFWRTRYWG--PPFLQ---APSGAELWVWFQDTVTDVDKSWKELSNVLSG 136
Query: 153 LFCASINFLESSTTYSAPELTFKP-SFGN------LRYGTLPREAVCTENLTPWLKLLPC 205
+FCAS+NF++S+ T + P +FKP N LRY LPRE VCTENLTPW KLLPC
Sbjct: 137 IFCASLNFIDSTNTVT-PTASFKPLGLANDTDHYFLRYAVLPREVVCTENLTPWKKLLPC 195
Query: 206 RDKAGLSALMDRPSIYRGFYHSQRLRLTSSESGSDEVDSGIGLDQTLTVVLQPSSWRTGK 265
KAGLS L+ ++ YHSQ + + + L QTL+VV ++ TG+
Sbjct: 196 SSKAGLSVLLKADRLFHTSYHSQAVHIRPVCRNARCTSISWELRQTLSVVFD--AFITGQ 253
Query: 266 TYSVETNIQPSWSISSIFGRNIPGKCVIAKSSNVYLQLDNGLVGELKNLERENAKYVANT 325
+ WS+ +F R + C +A S VY+ + T
Sbjct: 254 G-------KKDWSLFRMFSRTLTEPCPLASESRVYVDI--------------------TT 286
Query: 326 FESEGFQSNHAFKISVTPDKVFEEVDNLHGKSTSVIYG-FSVEKYSDSQPFDLGLTWKIP 384
+ Q N ++ P +++V L + T IY ++S+ ++ L WK P
Sbjct: 287 YN----QDNETLEVHPPPTTTYQDVI-LGTRKTYAIYDLLDTAMINNSRNLNIQLKWKRP 341
Query: 385 VVWSCQQAP-LHASRFLMGSGNERGAIAISLEPTESSEGLPTSHIIDGRCELRVDIFQVV 443
P LHA R++ G G ++G ++ L T P V + V
Sbjct: 342 PENEAPPVPFLHAQRYVSGYGLQKGELSTLLYNTHPYRAFP------------VLLLDTV 389
Query: 444 PWYIKVYFHTLQVFVDKQPRAMADVVDKIRVSPSKDKVSPGVMEMILKLPCGSKSAAFSL 503
PWY+++Y HTL + + + I P++D++ P ++EM+++LP S + S+
Sbjct: 390 PWYLRLYVHTLTI----TSKGKENKPSYIHYQPAQDRLQPHLLEMLIQLPANSVTKV-SI 444
Query: 504 EFDKGFLHIDEYPPDANQGFDIPSALIS--FPSFNARMNFSEDEFLNNSPILSKFQETSP 561
+F++ L EY PD N GF + +++S PS A +E SP+ + S
Sbjct: 445 QFERALLKWTEYTPDPNHGFYVSPSVLSALVPSMVAAKPVDWEE----SPLFNSLFPVSD 500
Query: 562 -----VLSYTEVLLIPLTTPDFSMPYNVITITCTVFALYFGSLLNVLRRRVDEEERILRS 616
V YTE LL+ L TPDFSMPYNVI +TCTV A+ +GS N+L R EE
Sbjct: 501 GSNYFVRLYTEPLLVNLPTPDFSMPYNVICLTCTVVAVCYGSFYNLLTRTFHIEE----- 555
Query: 617 RAGHKAGWISQLLSRLSAKLRGRP 640
+ G +++ L+ L + RG P
Sbjct: 556 ---PRTGGLAKRLANLIRRARGVP 576
>sp|O94380|GPI16_SCHPO GPI transamidase component PIG-T homolog OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=gpi16 PE=3 SV=1
Length = 545
Score = 205 bits (521), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 179/628 (28%), Positives = 298/628 (47%), Gaps = 100/628 (15%)
Query: 22 LFLYATVSSSGSVLKQGGGEEFSEELLLKPFPDRKVLAHFHFQSRAPHSSSHGRHHHLF- 80
L L+A S S+ E + E L +K F R F F+ A S+H
Sbjct: 7 LLLFAYSLLSFSLTAATIDETYDESLFIKSFSSRYSYVSFAFEIGASTDSTHSSVFSESS 66
Query: 81 ----PKAIAQLVKKFRVKEMELSFTQGRWRYEQWGGFDPLSSNNAKPPGVELWAVFDVPQ 136
P +IA+++ + +V E+ + T+GRW YE W P + + G E+WA
Sbjct: 67 FSLFPLSIARVMDECQVSELHIRATRGRWDYENWKE-SPDNGFYSGGLGFEVWAFMANDP 125
Query: 137 SLVDVYWRNLTHTLSGLFCASINFLESSTTYSAPELTFKPSF---GNLRY-GTLPREAVC 192
S+ YW LT+ LSGL CAS+N+++SS TY P+L++ SF N +Y +LP+E VC
Sbjct: 126 SMK--YWLKLTNQLSGLLCASLNYIDSSNTYQ-PQLSYPGSFSFSNNTQYFASLPQEDVC 182
Query: 193 TENLTPWLKLLPCRDKAGLSALMDRPSIYRGFYHSQRLRLTSSESGS-DEVDSGIGLDQT 251
TENL+P KLLPC+ KAG+++L+D + +HS + + SE+ S V GI +
Sbjct: 183 TENLSPLFKLLPCKRKAGIASLLDSHLFFDTDWHSFSIDVYPSENQSLASVKMGIIIQAV 242
Query: 252 LTVVLQPSSWRTGK-TYSVETNIQPSWSISSIFGRNIPGKCVIAKSSNVYLQLDNGLVGE 310
+ V + + R GK T+ + + S+ C+++ S + +D+
Sbjct: 243 VDV--ERNGRRKGKTTFQPPSEYCHDEDMDSL-------HCLMSGYSTEHHTVDD----L 289
Query: 311 LKNLERENAKYVANTFESEGFQSNHAFKISVTPDKVFEEVDNLHGKSTSVIYGFSVEKYS 370
+ +E +++TF S+ F SN +++D FS+++ +
Sbjct: 290 FHKVPKERC-LLSSTF-SDVFVSNG------------DKIDT-----------FSLDEAA 324
Query: 371 DSQPFDLGLTWKIPVVWSCQQAPLHASRFLMGSGNERGAIAISLEPTESSEGLPTSHIID 430
+ Q IP+ + + R L GN G+++ ++ SS P +
Sbjct: 325 NIQ---------IPIQSTSDNHTVTVDRSLSNDGNHWGSLSSTIYNPSSS---PRT---- 368
Query: 431 GRCELRVDIFQVVPWYIKVYFHTLQVFVDKQPRAMADVVDKIRVSPSKDKVSPGVMEMIL 490
+ F+ PW+++VY HTL + ++ D ++K+ P +D+ + +ME+
Sbjct: 369 ------IVYFEKFPWFVRVYLHTLTITLNGTRINTKDFIEKLYYQPLRDRKAGTMMEIQF 422
Query: 491 KLPCGSKSAAFSLEFDKGFLHIDEYPPDANQGFDIPSALISFPSFNARMNFSEDEFLNNS 550
+P + + +K L +DEYPPDAN+G+++P A+IS F E NN+
Sbjct: 423 SIPPHT-NLIVHFNVEKTPLRLDEYPPDANRGYNLPPAIISV--------FDE----NNT 469
Query: 551 PILSKFQETSPVLSYTEVLLIPLTTPDFSMPYNVITITCTVFALYFGSLLNVLRRRVDEE 610
+ S T LL+ + TPDFSMPYNVI T TV AL FG + N+L RR +
Sbjct: 470 KLCSL---------RTAALLMFIPTPDFSMPYNVIIFTSTVIALTFGGIFNLLTRRFVPQ 520
Query: 611 ERILRSRAGHKAGWISQLLSRLSAKLRG 638
+ ++R + + +L ++ K RG
Sbjct: 521 QSKFQNR---QPSMLQRLKEKIFHKKRG 545
>sp|P38875|GPI16_YEAST GPI transamidase component GPI16 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=GPI16 PE=1 SV=2
Length = 610
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 175/636 (27%), Positives = 288/636 (45%), Gaps = 104/636 (16%)
Query: 18 LLCQLFLYATVSSSGSVLKQGGGEEFSEELLLKPFPDRKVLAHFHFQSRA----PHSSSH 73
LL +F TVS G + + E L+LKP P+ +L F FQ ++ P SS
Sbjct: 13 LLLGVFAEDTVSQIG--INDSLWYPYDEALVLKPLPNNDLLLSFAFQLQSEPFDPAVSSM 70
Query: 74 G----RHHHLFPKAIAQLVKKFRVKEMELSFTQGRWRYEQWGGFDPLSSNNAKPPGVELW 129
H+ FP+AI L++ ++ L FT+G W WG P + A GVELW
Sbjct: 71 SYDAYEHYTTFPRAIPPLLESTATRQFHLRFTRGFWDALSWGQL-PHAGKEAGASGVELW 129
Query: 130 A---VFDVPQSLVDVYWRNLTHTLSGLFCASINFLESSTTYSAPELTFKPSFGN------ 180
+ D Q+ + W+ L+++LSGLFC+S+NF++ S T + P ++ G
Sbjct: 130 SQVQAMDQEQAFHN--WKKLSNSLSGLFCSSLNFIDESRT-TFPRRSYASDIGAPLFNST 186
Query: 181 ----LRYGTLPREAVCTENLTPWLKLLPCRDKAGLSALMDRPSIYRGFYHSQRLRLTSSE 236
L +LP E +CTENLTP++KLLP R K+GL++L+D ++ ++S L + +
Sbjct: 187 EKLYLMRASLPNEPICTENLTPFIKLLPTRGKSGLTSLLDGHKLFDSLWNSISLDIATIC 246
Query: 237 SGSDEVDSGIGLDQTLTVVLQ-PSSWRTGKTYSVETNIQPSWSISSIFGRNIP----GKC 291
S ++ +D + +V PS+ G+ R IP G
Sbjct: 247 SEDEDALCHYEMDARIEMVTHVPSALARGE-------------------RPIPKPLDGNT 287
Query: 292 VIAKSSNVYLQLDNGLVGELKNLERENAKYVANTFESEGFQSNHAFKISVTPDK----VF 347
+ + + + E + ++ A + +N +I D+ F
Sbjct: 288 LRCDTDKPFDSYQCFPLPEPSQTHFKLSQLFARPINNGNLFANRPTRICAEVDRSTWTAF 347
Query: 348 EEVDNLHGKSTSVIYGFSVEKYSDSQPFDLGL----TWKI-PVVWSCQQAPLHASRFLMG 402
VD+ + + S ++ +D L T K+ P+V P+H SR L G
Sbjct: 348 LSVDDTIFSTHDNCFDLSNDQNEGGSGYDFILESTDTTKVTPIV----PVPIHVSRSLTG 403
Query: 403 SGNERGAIAISLEPTESSEGLPTSHIIDGRCELRVDIFQVVPWYIKVYFHTLQVFVDKQP 462
+G +RG + I D +++ F+ +PW+++VY +LQ+ P
Sbjct: 404 NGQDRGGMRIVFHN-------------DNDTPVKLIYFESLPWFMRVYLSSLQITSTTSP 450
Query: 463 RAMAD--VVDKIRVSPSKDKVSPGVMEMILKLPCGSKSAAFSLEFDKGFLHIDEYPPDAN 520
+ + ++DK + + D+ PG +E + +P + + +FDK L EYPPDAN
Sbjct: 451 QLQENDIILDKYYLQ-AADRKRPGHLEFTMLIPANT-DIVMTYQFDKALLQFAEYPPDAN 508
Query: 521 QGFDIPSALISFPSFNARMNFSEDEFLNNSPILSKFQETSPVLSYTEVLLIPLTTPDFSM 580
GF+I +A+I+ S + + E T LL+ L+TPDFSM
Sbjct: 509 HGFEIDAAVITVLSLESSSSLYE--------------------MRTSTLLLSLSTPDFSM 548
Query: 581 PYNVITITCTVFALYFGSLLNVLRRR---VDEEERI 613
PYNVI +T T+ L FG L N++ +R V+E ++I
Sbjct: 549 PYNVIILTSTIMGLIFGMLYNLMVKRMVTVEEADKI 584
>sp|Q5JDR9|VATC_PYRKO V-type ATP synthase subunit C OS=Pyrococcus kodakaraensis (strain
ATCC BAA-918 / JCM 12380 / KOD1) GN=atpC PE=3 SV=1
Length = 365
Score = 35.4 bits (80), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 544 DEFLNNSPILSKFQETSPVLSYTEVLLIPLTTPDFSMPY--------NVITITCTVFALY 595
D + P+L K + + + E+L+I TP + PY +V T ++ +Y
Sbjct: 144 DYIIELGPMLPKVKAMAEAKTLEEILVILEGTP-YEGPYQELIAGNIDVSTFETELYRMY 202
Query: 596 FGSLLNVLRRRVDEEERILRSRAGHKAGWISQLLSRLSAKLRGRPQEQPTSSL 648
+ LLN R R D+E+ +L K ++ L++ L KL G ++ S L
Sbjct: 203 YKKLLNYARSRKDDEKTLLTEFIKLKIDKLN-LMTTLRGKLAGLSAKEIRSML 254
>sp|Q9XWI6|EIF3B_CAEEL Eukaryotic translation initiation factor 3 subunit B
OS=Caenorhabditis elegans GN=eif-3.B PE=2 SV=1
Length = 725
Score = 35.0 bits (79), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 57/137 (41%), Gaps = 14/137 (10%)
Query: 310 ELKNLERENAKYVANTFESEGFQSNHAFKISVTPDKVFEEVDNLHGKSTSVIYGFSVEKY 369
E LERE + FESE F+ +++ K FE TS + + E
Sbjct: 325 EKDKLEREQKINGISIFESEKFELYEGRPVNIENIKQFE------WSPTSTVLAYYSE-C 377
Query: 370 SDSQPFDLGLTWKIPVVWSCQQAPLH----ASRFLMGSGNERGAIAISLEPTESSEGLPT 425
+D+ P + GL ++P + + A +H A F SG + + E E
Sbjct: 378 TDAVPAEFGLL-QVPSMQRLRSARVHNVADAQMFWQKSGKRLAFYTMRFKKKEYRETGEV 436
Query: 426 SHIIDGRCELRVDIFQV 442
++ G C+ VDIF++
Sbjct: 437 KYV--GGCQYHVDIFEI 451
>sp|P49327|FAS_HUMAN Fatty acid synthase OS=Homo sapiens GN=FASN PE=1 SV=3
Length = 2511
Score = 33.5 bits (75), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 89/251 (35%), Gaps = 48/251 (19%)
Query: 219 SIYRGFYHSQRLRLTSSESGSDEVDSGIGLDQTLTVVLQPSSWRTGKTYSVETNIQPSWS 278
SI +HS R +S+E + + S V+ Q + W + ++V I P
Sbjct: 716 SIPEAQWHSSLARTSSAEYNVNNLVS--------PVLFQEALWHVPE-HAVVLEIAPHAL 766
Query: 279 ISSIFGRNIPGKCVIAKSSNVYLQLDNGLVGELKNLERENAKYVANTFESEGFQSNHAFK 338
+ ++ R + C I + +K R+N ++ G H
Sbjct: 767 LQAVLKRGLKPSCTI--------------IPLMKKDHRDNLEFFL-----AGIGRLHLSG 807
Query: 339 ISVTPDKVFEEVDNLHGKSTSVIYGFSVEKYSDSQPFDLGLTWKIPVVWSCQQAPLHASR 398
I P+ +F V+ + T +I S +D L W +P A
Sbjct: 808 IDANPNALFPPVEFPAPRGTPLI--------SPLIKWDHSLAWDVPA----------AED 849
Query: 399 FLMGSGNERGAIAISLEPTESSEGLPTSHIIDGRCELRVDIFQVVPWYIKVYFHTLQVFV 458
F GSG+ AI +ES + H +DGR + + W K L + V
Sbjct: 850 FPNGSGSPSAAIYNIDTSSESPDHYLVDHTLDGRVLFPATGYLSIVW--KTLARALGLGV 907
Query: 459 DKQPRAMADVV 469
++ P DVV
Sbjct: 908 EQLPVVFEDVV 918
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 256,131,972
Number of Sequences: 539616
Number of extensions: 11134842
Number of successful extensions: 22767
Number of sequences better than 100.0: 8
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 22736
Number of HSP's gapped (non-prelim): 10
length of query: 676
length of database: 191,569,459
effective HSP length: 124
effective length of query: 552
effective length of database: 124,657,075
effective search space: 68810705400
effective search space used: 68810705400
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)