BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005807
(676 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2KHO|A Chain A, Nmr-Rdc XRAY STRUCTURE OF E. COLI HSP70 (DNAK) CHAPERONE
(1-605) Complexed With Adp And Substrate
Length = 605
Score = 761 bits (1966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/585 (63%), Positives = 466/585 (79%), Gaps = 6/585 (1%)
Query: 55 VIGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPA 114
+IG+DLGTTNSCVA+M+G P+V+EN+EG RTTPS++A+ Q GE LVG PAKRQAVTNP
Sbjct: 4 IIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQ 63
Query: 115 NTLFGTKRLIGRRFNDAQTQKEMKMVPFKIVNAPNGDAWVEANGQQYSPSQIGAFVLTKM 174
NTLF KRLIGRRF D + Q+++ ++PFKI+ A NGDAWVE GQ+ +P QI A VL KM
Sbjct: 64 NTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKM 123
Query: 175 KETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGMNN 234
K+TAE YLG+ V+EAVITVPAYFNDAQRQATKDAGRIAGL+V+RIINEPTAAAL+YG++
Sbjct: 124 KKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDK 183
Query: 235 KEG--LIAVFDLGGGTFDVSVLEISN----GVFEVKATNGDTFLGGEDFDNALLEFLVSE 288
G IAV+DLGGGTFD+S++EI FEV ATNGDT LGGEDFD+ L+ +LV E
Sbjct: 184 GTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEE 243
Query: 289 FKRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRS 348
FK+ + IDL D LA+QRL+E+AEKAKIELSS QT++NLP+ITADA+G KH+NI +TR+
Sbjct: 244 FKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRA 303
Query: 349 KFETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIFGKSPSK 408
K E+LV L+ R+ P K L+DA +++ D+D+V+LVGG TR+P VQ+ V E FGK P K
Sbjct: 304 KLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRK 363
Query: 409 GVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKS 468
VNPDEAVA+GAA+QGG+L GDVK++LLLDVTPLSLGIET+GG+ T LI +NTTIPTK S
Sbjct: 364 DVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHS 423
Query: 469 QVFSTAADNQTQVGIKVLQGEREMAADNKALGEFELMGIPPAPRGIPQIEVTFDIDANGI 528
QVFSTA DNQ+ V I VLQGER+ AADNK+LG+F L GI PAPRG+PQIEVTFDIDA+GI
Sbjct: 424 QVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGI 483
Query: 529 VTVSAKDKATGKEQQITIRSSGGLSESEIEKMVKEAELHAQRDQERKTLIDIRNNADTTI 588
+ VSAKDK +GKEQ+ITI++S GL+E EI+KMV++AE +A+ D++ L+ RN D +
Sbjct: 484 LHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFDELVQTRNQGDHLL 543
Query: 589 YSIEKSLGEYREKIPGEVAKEIEDAVSDLRKAMAGEDIDGIKAKL 633
+S K + E +K+P + IE A++ L A+ GED I+AK+
Sbjct: 544 HSTRKQVEEAGDKLPADDKTAIESALTALETALKGEDKAAIEAKM 588
>pdb|4B9Q|A Chain A, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
pdb|4B9Q|B Chain B, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
pdb|4B9Q|C Chain C, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
pdb|4B9Q|D Chain D, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
Length = 605
Score = 740 bits (1910), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/599 (60%), Positives = 463/599 (77%), Gaps = 10/599 (1%)
Query: 55 VIGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPA 114
+IG+DLGTTNSCVA+ +G P+V+EN+EG RTTPS++A+ Q G LVG PAKRQAVTNP
Sbjct: 4 IIGIDLGTTNSCVAIXDGTTPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQ 63
Query: 115 NTLFGTKRLIGRRFNDAQTQKEMKMVPFKIVNAPNGDAWVEANGQQYSPSQIGAFVLTKM 174
NTLF KRLIGRRF D + Q+++ + PFKI+ A NGDAWVE GQ+ +P QI A VL K
Sbjct: 64 NTLFAIKRLIGRRFQDEEVQRDVSIXPFKIIAADNGDAWVEVKGQKXAPPQISAEVLKKX 123
Query: 175 KETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGMNN 234
K+TAE YLG+ V+EAVITVPAYFNDAQRQATKDAGRIAGL+V+RIINEPTAAAL+YG++
Sbjct: 124 KKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDK 183
Query: 235 KEG--LIAVFDLGGGTFDVSVLEISN----GVFEVKATNGDTFLGGEDFDNALLEFLVSE 288
G IAV+DLGGG FD+S++EI FEV ATNGDT LGGEDFD+ L+ +LV E
Sbjct: 184 GTGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEE 243
Query: 289 FKRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRS 348
FK+ + IDL D LA QRL+E+AEKAKIELSS QT++NLP+ITADA+G KH NI +TR+
Sbjct: 244 FKKDQGIDLRNDPLAXQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHXNIKVTRA 303
Query: 349 KFETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIFGKSPSK 408
K E+LV L+ R+ P K L+DA +++ D+D+V+LVGG TR P VQ+ V E FGK P K
Sbjct: 304 KLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRXPXVQKKVAEFFGKEPRK 363
Query: 409 GVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKS 468
VNPDEAVA+GAA+QGG+L GDVK++LLLDVTPLSLGIET GG+ T LI +NTTIPTK S
Sbjct: 364 DVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIETXGGVXTTLIAKNTTIPTKHS 423
Query: 469 QVFSTAADNQTQVGIKVLQGEREMAADNKALGEFELMGIPPAPRGIPQIEVTFDIDANGI 528
QVFSTA DNQ+ V I VLQGER+ AADNK+LG+F L GI PAPRG PQIEVTFDIDA+GI
Sbjct: 424 QVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGXPQIEVTFDIDADGI 483
Query: 529 VTVSAKDKATGKEQQITIRSSGGLSESEIEKMVKEAELHAQRDQERKTLIDIRNNADTTI 588
+ VSAKDK +GKEQ+ITI++S GL+E EI+K V++AE +A+ D++ + L+ RN D +
Sbjct: 484 LHVSAKDKNSGKEQKITIKASSGLNEDEIQKXVRDAEANAEADRKCEELVQTRNQGDHLL 543
Query: 589 YSIEKSLGEYREKIPGEVAKEIEDAVSDLRKAMAGEDIDGIKAKLDAANKAVSKIGQHM 647
+S K + E +K+P + IE A++ L A+ GED KA ++A + ++++ Q +
Sbjct: 544 HSTRKQVEEAGDKLPADDKTAIESALTALETALKGED----KAAIEAKXQELAQVSQKL 598
>pdb|2V7Y|A Chain A, Crystal Structure Of The Molecular Chaperone Dnak From
Geobacillus Kaustophilus Hta426 In Post-Atp Hydrolysis
State
pdb|4ANI|C Chain C, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
pdb|4ANI|D Chain D, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
pdb|4ANI|G Chain G, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
pdb|4ANI|H Chain H, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
Length = 509
Score = 668 bits (1723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/532 (62%), Positives = 412/532 (77%), Gaps = 27/532 (5%)
Query: 55 VIGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPA 114
+IG+DLGTTNSCVAV+EG KVI N EG RTTPSVVAF + GE LVG AKRQA+TNP
Sbjct: 4 IIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAF-KNGERLVGEVAKRQAITNP- 61
Query: 115 NTLFGTKRLIGRRFNDAQTQKEMKMVPFKIVNAPNGDAWVEANGQQYSPSQIGAFVLTKM 174
NT+ KR +G D VE G+QY+P +I A +L +
Sbjct: 62 NTIISIKRHMGT------------------------DYKVEIEGKQYTPQEISAIILQYL 97
Query: 175 KETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGMNN 234
K AE YLG+ V+ AVITVPAYFNDAQRQATKDAGRIAGL+V+RIINEPTAAAL+YG++
Sbjct: 98 KSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGRIAGLEVERIINEPTAAALAYGLDK 157
Query: 235 KEG-LIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEFKRTE 293
+E I V+DLGGGTFDVS+LE+ +GVFEVKAT GD LGG+DFD ++++LV++FK+
Sbjct: 158 EEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQFKQEH 217
Query: 294 RIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKFETL 353
IDLS+DK+ALQRL+++AEKAK ELS +QT+I+LPFI+A+ +G HL +TLTR+KFE L
Sbjct: 218 GIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEEL 277
Query: 354 VNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIFGKSPSKGVNPD 413
HL+ERT P + L+DA +T D+D+V+LVGG TR+P VQE + GK P KGVNPD
Sbjct: 278 SAHLVERTMGPVRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKRELGKEPHKGVNPD 337
Query: 414 EAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFST 473
E VA+GAAIQGG++ G+VK+++LLDVTPLSLGIET+GG+FT+LI RNTTIPT KSQVF+T
Sbjct: 338 EVVAIGAAIQGGVIAGEVKDVVLLDVTPLSLGIETMGGVFTKLIERNTTIPTSKSQVFTT 397
Query: 474 AADNQTQVGIKVLQGEREMAADNKALGEFELMGIPPAPRGIPQIEVTFDIDANGIVTVSA 533
AADNQT V I VLQGER MAADNK+LG F+L GIPPAPRG+PQIEVTFDIDANGIV V A
Sbjct: 398 AADNQTTVDIHVLQGERPMAADNKSLGRFQLTGIPPAPRGVPQIEVTFDIDANGIVHVRA 457
Query: 534 KDKATGKEQQITIRSSGGLSESEIEKMVKEAELHAQRDQERKTLIDIRNNAD 585
KD T KEQ ITI+SS GLSE EI++M+KEAE +A+ D++RK ++RN AD
Sbjct: 458 KDLGTNKEQSITIKSSSGLSEEEIQRMIKEAEENAEADRKRKEAAELRNEAD 509
>pdb|3C7N|B Chain B, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex
Length = 554
Score = 563 bits (1451), Expect = e-160, Method: Compositional matrix adjust.
Identities = 289/552 (52%), Positives = 392/552 (71%), Gaps = 17/552 (3%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
+G+DLGTT SCV V + ++I N +G RTTPS VAF E L+G AK Q NP N
Sbjct: 7 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTN 65
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVN-APNGDAWVEANGQ--QYSPSQIGAFVLT 172
T+F KRLIGRRF+DA Q +MK PF +VN A VE G+ + P ++ + VLT
Sbjct: 66 TVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLT 125
Query: 173 KMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGM 232
KMKE AE+YLGK+V+ AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA++YG+
Sbjct: 126 KMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 185
Query: 233 NNKEGL---IAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEF 289
+ K G + +FDLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFDN ++ ++EF
Sbjct: 186 DKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEF 245
Query: 290 KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSK 349
KR + D+S++K A++RLR + E+AK LSS++Q I + + ++TR++
Sbjct: 246 KRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGID----FYTSITRAR 301
Query: 350 FETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSPSK 408
FE L L T P + L+DA + + +++LVGG TR+PK+Q+++ + F GK +K
Sbjct: 302 FEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNK 361
Query: 409 GVNPDEAVALGAAIQGGILRGD----VKELLLLDVTPLSLGIETLGGIFTRLINRNTTIP 464
+NPDEAVA GAA+Q IL GD V++LLLLDVTPLSLGIET GG+ T LI RNTTIP
Sbjct: 362 SINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIP 421
Query: 465 TKKSQVFSTAADNQTQVGIKVLQGEREMAADNKALGEFELMGIPPAPRGIPQIEVTFDID 524
TK++Q F+T +DNQ V I+V +GER M DN LG+FEL GIPPAPRG+PQIEVTFDID
Sbjct: 422 TKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDID 481
Query: 525 ANGIVTVSAKDKATGKEQQITIRSSGG-LSESEIEKMVKEAELHAQRDQERKTLIDIRNN 583
ANGI+ VSA DK+TGKE +ITI + G LS+ +IE+MV+EAE + D++++ + +N+
Sbjct: 482 ANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNS 541
Query: 584 ADTTIYSIEKSL 595
++ ++++ ++
Sbjct: 542 LESYAFNMKATV 553
>pdb|1YUW|A Chain A, Crystal Structure Of Bovine Hsc70(Aa1-554)e213aD214A
MUTANT
Length = 554
Score = 563 bits (1451), Expect = e-160, Method: Compositional matrix adjust.
Identities = 289/552 (52%), Positives = 392/552 (71%), Gaps = 17/552 (3%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
+G+DLGTT SCV V + ++I N +G RTTPS VAF E L+G AK Q NP N
Sbjct: 7 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTN 65
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVN-APNGDAWVEANGQ--QYSPSQIGAFVLT 172
T+F KRLIGRRF+DA Q +MK PF +VN A VE G+ + P ++ + VLT
Sbjct: 66 TVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLT 125
Query: 173 KMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGM 232
KMKE AE+YLGK+V+ AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA++YG+
Sbjct: 126 KMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 185
Query: 233 NNKEGL---IAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEF 289
+ K G + +FDLGGGTFDVS+L I+ G+FEVK+T GDT LGGEDFDN ++ ++EF
Sbjct: 186 DKKVGAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEF 245
Query: 290 KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSK 349
KR + D+S++K A++RLR + E+AK LSS++Q I + + ++TR++
Sbjct: 246 KRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGID----FYTSITRAR 301
Query: 350 FETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSPSK 408
FE L L T P + L+DA + + +++LVGG TR+PK+Q+++ + F GK +K
Sbjct: 302 FEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNK 361
Query: 409 GVNPDEAVALGAAIQGGILRGD----VKELLLLDVTPLSLGIETLGGIFTRLINRNTTIP 464
+NPDEAVA GAA+Q IL GD V++LLLLDVTPLSLGIET GG+ T LI RNTTIP
Sbjct: 362 SINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIP 421
Query: 465 TKKSQVFSTAADNQTQVGIKVLQGEREMAADNKALGEFELMGIPPAPRGIPQIEVTFDID 524
TK++Q F+T +DNQ V I+V +GER M DN LG+FEL GIPPAPRG+PQIEVTFDID
Sbjct: 422 TKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDID 481
Query: 525 ANGIVTVSAKDKATGKEQQITIRSSGG-LSESEIEKMVKEAELHAQRDQERKTLIDIRNN 583
ANGI+ VSA DK+TGKE +ITI + G LS+ +IE+MV+EAE + D++++ + +N+
Sbjct: 482 ANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNS 541
Query: 584 ADTTIYSIEKSL 595
++ ++++ ++
Sbjct: 542 LESYAFNMKATV 553
>pdb|2V7Z|A Chain A, Crystal Structure Of The 70-Kda Heat Shock Cognate Protein
From Rattus Norvegicus In Post-Atp Hydrolysis State
pdb|2V7Z|B Chain B, Crystal Structure Of The 70-Kda Heat Shock Cognate Protein
From Rattus Norvegicus In Post-Atp Hydrolysis State
Length = 543
Score = 556 bits (1434), Expect = e-158, Method: Compositional matrix adjust.
Identities = 287/540 (53%), Positives = 382/540 (70%), Gaps = 17/540 (3%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
+G+DLGTT SCV V + ++I N +G RTTPS VAF E L+G AK Q NP N
Sbjct: 7 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTN 65
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVN-APNGDAWVEANGQ--QYSPSQIGAFVLT 172
T+F KRLIGRRF+DA Q +MK PF +VN A VE G+ + P ++ + VLT
Sbjct: 66 TVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLT 125
Query: 173 KMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGM 232
KMKE AE+YLGK+V+ AV+TVPAYFND+QRQA KDAG IAGL+V RIINEPTAAA++YG+
Sbjct: 126 KMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQAAKDAGTIAGLNVLRIINEPTAAAIAYGL 185
Query: 233 NNK---EGLIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEF 289
+ K E + +FDLGGGTFDVS+L +G+FEVK+T GDT LGGEDFDN ++ ++EF
Sbjct: 186 DKKVRAERNVLIFDLGGGTFDVSILTTEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEF 245
Query: 290 KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSK 349
KR + D+S++K A++RLR + E+AK LSS++Q I + + ++TR++
Sbjct: 246 KRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGID----FYTSITRAR 301
Query: 350 FETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSPSK 408
FE L L T P + L+DA + + +++LVGG TR+PK+Q+++ + F GK +K
Sbjct: 302 FEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNK 361
Query: 409 GVNPDEAVALGAAIQGGILRGD----VKELLLLDVTPLSLGIETLGGIFTRLINRNTTIP 464
+NPDEAVA GAA+Q IL GD V++LLLLDVTPLSLGIET GG+ T LI RNTTIP
Sbjct: 362 SINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIP 421
Query: 465 TKKSQVFSTAADNQTQVGIKVLQGEREMAADNKALGEFELMGIPPAPRGIPQIEVTFDID 524
TK++Q F+T +DNQ V I+V +GER M DN LG+FEL GIPPAPRG+PQIEVTFDID
Sbjct: 422 TKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDID 481
Query: 525 ANGIVTVSAKDKATGKEQQITIRSSGG-LSESEIEKMVKEAELHAQRDQERKTLIDIRNN 583
ANGI+ VSA DK+TGKE +ITI + G LS+ +IE+MV+EAE + D++++ + +N+
Sbjct: 482 ANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNS 541
>pdb|1DKG|D Chain D, Crystal Structure Of The Nucleotide Exchange Factor Grpe
Bound To The Atpase Domain Of The Molecular Chaperone
Dnak
Length = 383
Score = 516 bits (1328), Expect = e-146, Method: Compositional matrix adjust.
Identities = 245/379 (64%), Positives = 306/379 (80%), Gaps = 6/379 (1%)
Query: 55 VIGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPA 114
+IG+DLGTTNSCVA+M+G P+V+EN+EG RTTPS++A+ Q GE LVG PAKRQAVTNP
Sbjct: 4 IIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQ 63
Query: 115 NTLFGTKRLIGRRFNDAQTQKEMKMVPFKIVNAPNGDAWVEANGQQYSPSQIGAFVLTKM 174
NTLF KRLIGRRF D + Q+++ ++PFKI+ A NGDAWVE GQ+ +P QI A VL KM
Sbjct: 64 NTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKM 123
Query: 175 KETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGMNN 234
K+TAE YLG+ V+EAVITVPAYFNDAQRQATKDAGRIAGL+V+RIINEPTAAAL+YG++
Sbjct: 124 KKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDK 183
Query: 235 KEG--LIAVFDLGGGTFDVSVLEIS----NGVFEVKATNGDTFLGGEDFDNALLEFLVSE 288
G IAV+DLGGGTFD+S++EI FEV ATNGDT LGGEDFD+ L+ +LV E
Sbjct: 184 GTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEE 243
Query: 289 FKRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRS 348
FK+ + IDL D LA+QRL+E+AEKAKIELSS QT++NLP+ITADA+G KH+NI +TR+
Sbjct: 244 FKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRA 303
Query: 349 KFETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIFGKSPSK 408
K E+LV L+ R+ K L+DA +++ D+D+V+LVGG TR+P VQ+ V E FGK P K
Sbjct: 304 KLESLVEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRK 363
Query: 409 GVNPDEAVALGAAIQGGIL 427
VNPDEAVA+GAA+QGG+L
Sbjct: 364 DVNPDEAVAIGAAVQGGVL 382
>pdb|3IUC|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 5
(BipGRP78) ATPASE DOMAIN IN COMPLEX WITH ADP
pdb|3IUC|C Chain C, Crystal Structure Of The Human 70kda Heat Shock Protein 5
(BipGRP78) ATPASE DOMAIN IN COMPLEX WITH ADP
Length = 408
Score = 400 bits (1028), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/383 (53%), Positives = 265/383 (69%), Gaps = 11/383 (2%)
Query: 55 VIGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPA 114
V+G+DLGTT SCV V + ++I N +G R TPS VAF +GE L+G AK Q +NP
Sbjct: 28 VVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPE 87
Query: 115 NTLFGTKRLIGRRFNDAQTQKEMKMVPFKIVNAPNGDA-WVEANGQQ---YSPSQIGAFV 170
NT+F KRLIGR +ND Q+++K +PFK+V V+ G Q ++P +I A V
Sbjct: 88 NTVFDAKRLIGRTWNDPSVQQDIKFLPFKVVEKKTKPYIQVDIGGGQTKTFAPEEISAMV 147
Query: 171 LTKMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSY 230
LTKMKETAE+YLGK V+ AV+TVPAYFNDAQRQATKDAG IAGL+V RIINEPTAAA++Y
Sbjct: 148 LTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAAAIAY 207
Query: 231 GMNNKEGL--IAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSE 288
G++ +EG I VFDLGGGTFDVS+L I NGVFEV ATNGDT LGGEDFD ++E +
Sbjct: 208 GLDKREGEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHFIKL 267
Query: 289 FKRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRS 348
+K+ D+ +D A+Q+LR EKAK LSS Q I + + + TLTR+
Sbjct: 268 YKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFYE----GEDFSETLTRA 323
Query: 349 KFETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSPS 407
KFE L L T P + L+D+++ D+DE++LVGG TR+PK+Q++V E F GK PS
Sbjct: 324 KFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPS 383
Query: 408 KGVNPDEAVALGAAIQGGILRGD 430
+G+NPDEAVA GAA+Q G+L GD
Sbjct: 384 RGINPDEAVAYGAAVQAGVLSGD 406
>pdb|3LDL|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Complex With Atp
pdb|3LDL|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Complex With Atp
pdb|3LDN|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Apo Form
pdb|3LDN|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Apo Form
pdb|3LDO|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 / Bip) Atpase Domain In Complex With Amppnp
pdb|3LDO|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 / Bip) Atpase Domain In Complex With Amppnp
pdb|3LDP|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Complex With Small Molecule
Inhibitor
pdb|3LDP|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Complex With Small Molecule
Inhibitor
Length = 384
Score = 398 bits (1022), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/382 (53%), Positives = 264/382 (69%), Gaps = 11/382 (2%)
Query: 55 VIGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPA 114
V+G+DLGTT SCV V + ++I N +G R TPS VAF +GE L+G AK Q +NP
Sbjct: 7 VVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPE 66
Query: 115 NTLFGTKRLIGRRFNDAQTQKEMKMVPFKIVNAPNGDA-WVEANGQQ---YSPSQIGAFV 170
NT+F KRLIGR +ND Q+++K +PFK+V V+ G Q ++P +I A V
Sbjct: 67 NTVFDAKRLIGRTWNDPSVQQDIKFLPFKVVEKKTKPYIQVDIGGGQTKTFAPEEISAMV 126
Query: 171 LTKMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSY 230
LTKMKETAE+YLGK V+ AV+TVPAYFNDAQRQATKDAG IAGL+V RIINEPTAAA++Y
Sbjct: 127 LTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAAAIAY 186
Query: 231 GMNNKEGL--IAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSE 288
G++ +EG I VFDLGGGTFDVS+L I NGVFEV ATNGDT LGGEDFD ++E +
Sbjct: 187 GLDKREGEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHFIKL 246
Query: 289 FKRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRS 348
+K+ D+ +D A+Q+LR EKAK LSS Q I + + + TLTR+
Sbjct: 247 YKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFYE----GEDFSETLTRA 302
Query: 349 KFETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSPS 407
KFE L L T P + L+D+++ D+DE++LVGG TR+PK+Q++V E F GK PS
Sbjct: 303 KFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPS 362
Query: 408 KGVNPDEAVALGAAIQGGILRG 429
+G+NPDEAVA GAA+Q G+L G
Sbjct: 363 RGINPDEAVAYGAAVQAGVLSG 384
>pdb|2QW9|A Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Apo
State
pdb|2QW9|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Apo
State
pdb|2QWL|A Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Adp
State
pdb|2QWL|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Adp
State
pdb|2QWM|A Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The AdpVi
State
pdb|2QWM|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The AdpVi
State
Length = 394
Score = 383 bits (984), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/393 (50%), Positives = 269/393 (68%), Gaps = 16/393 (4%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
+G+DLGTT SCV V + ++I N +G RTTPS VAF E L+G AK Q NP N
Sbjct: 7 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTN 65
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVN-APNGDAWVEANGQ--QYSPSQIGAFVLT 172
T+F KRLIGRRF+DA Q +MK PF +VN A VE G+ + P ++ + VLT
Sbjct: 66 TVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLT 125
Query: 173 KMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGM 232
KMKE AE+YLGK+V+ AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA++YG+
Sbjct: 126 KMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 185
Query: 233 NNKEGL---IAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEF 289
+ K G + +FDLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFDN ++ ++EF
Sbjct: 186 DKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEF 245
Query: 290 KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSK 349
KR + D+S++K A++RLR + E+AK LSS++Q I + + ++TR++
Sbjct: 246 KRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGID----FYTSITRAR 301
Query: 350 FETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSPSK 408
FE L L T P + L+DA + + +++LVGG TR+PK+Q+++ + F GK +K
Sbjct: 302 FEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNK 361
Query: 409 GVNPDEAVALGAAIQGGILRGD----VKELLLL 437
+NPDEAVA GAA+Q IL GD V++LLLL
Sbjct: 362 SINPDEAVAYGAAVQAAILSGDKSENVQDLLLL 394
>pdb|3QFU|A Chain A, Crystal Structure Of Yeast Hsp70 (BipKAR2) COMPLEXED WITH
ADP
Length = 394
Score = 381 bits (979), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/380 (52%), Positives = 262/380 (68%), Gaps = 13/380 (3%)
Query: 55 VIGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPA 114
VIG+DLGTT SCVAVM+ +++ N +G R TPS VAF E L+G AK Q NP
Sbjct: 20 VIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDD-ERLIGDAAKNQVAANPQ 78
Query: 115 NTLFGTKRLIGRRFNDAQTQKEMKMVPFKIVNA---PNGDAWVEANGQQYSPSQIGAFVL 171
NT+F KRLIG ++ND QK++K +PF +VN P + V+ + ++P +I +L
Sbjct: 79 NTIFDIKRLIGLKYNDRSVQKDIKHLPFNVVNKDGKPAVEVSVKGEKKVFTPEEISGMIL 138
Query: 172 TKMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYG 231
KMK+ AE YLG V+ AV+TVPAYFNDAQRQATKDAG IAGL+V RI+NEPTAAA++YG
Sbjct: 139 GKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRIVNEPTAAAIAYG 198
Query: 232 MN--NKEGLIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEF 289
++ +KE I V+DLGGGTFDVS+L I NGVFEV+AT+GDT LGGEDFD ++ L+ F
Sbjct: 199 LDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQLIKAF 258
Query: 290 KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINL-PFITADASGAKHLNITLTRS 348
K+ ID+S + AL +L+ AEKAK LSS T I + F+ L+ TLTR+
Sbjct: 259 KKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVD-----GIDLSETLTRA 313
Query: 349 KFETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSPS 407
KFE L L ++T P + L+D+ + KDVD+++LVGG TR+PKVQ+++ F GK S
Sbjct: 314 KFEELNLDLFKKTLKPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKAS 373
Query: 408 KGVNPDEAVALGAAIQGGIL 427
KG+NPDEAVA GAA+Q G+L
Sbjct: 374 KGINPDEAVAYGAAVQAGVL 393
>pdb|3QFP|A Chain A, Crystal Structure Of Yeast Hsp70 (BipKAR2) ATPASE DOMAIN
pdb|3QML|A Chain A, The Structural Analysis Of Sil1-Bip Complex Reveals The
Mechanism For Sil1 To Function As A Novel Nucleotide
Exchange Factor
pdb|3QML|B Chain B, The Structural Analysis Of Sil1-Bip Complex Reveals The
Mechanism For Sil1 To Function As A Novel Nucleotide
Exchange Factor
Length = 390
Score = 381 bits (978), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/380 (52%), Positives = 262/380 (68%), Gaps = 13/380 (3%)
Query: 55 VIGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPA 114
VIG+DLGTT SCVAVM+ +++ N +G R TPS VAF E L+G AK Q NP
Sbjct: 16 VIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDD-ERLIGDAAKNQVAANPQ 74
Query: 115 NTLFGTKRLIGRRFNDAQTQKEMKMVPFKIVNA---PNGDAWVEANGQQYSPSQIGAFVL 171
NT+F KRLIG ++ND QK++K +PF +VN P + V+ + ++P +I +L
Sbjct: 75 NTIFDIKRLIGLKYNDRSVQKDIKHLPFNVVNKDGKPAVEVSVKGEKKVFTPEEISGMIL 134
Query: 172 TKMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYG 231
KMK+ AE YLG V+ AV+TVPAYFNDAQRQATKDAG IAGL+V RI+NEPTAAA++YG
Sbjct: 135 GKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRIVNEPTAAAIAYG 194
Query: 232 MN--NKEGLIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEF 289
++ +KE I V+DLGGGTFDVS+L I NGVFEV+AT+GDT LGGEDFD ++ L+ F
Sbjct: 195 LDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQLIKAF 254
Query: 290 KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINL-PFITADASGAKHLNITLTRS 348
K+ ID+S + AL +L+ AEKAK LSS T I + F+ L+ TLTR+
Sbjct: 255 KKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVD-----GIDLSETLTRA 309
Query: 349 KFETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSPS 407
KFE L L ++T P + L+D+ + KDVD+++LVGG TR+PKVQ+++ F GK S
Sbjct: 310 KFEELNLDLFKKTLKPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKAS 369
Query: 408 KGVNPDEAVALGAAIQGGIL 427
KG+NPDEAVA GAA+Q G+L
Sbjct: 370 KGINPDEAVAYGAAVQAGVL 389
>pdb|1HPM|A Chain A, How Potassium Affects The Activity Of The Molecular
Chaperone Hsc70. Ii. Potassium Binds Specifically In The
Atpase Active Site
pdb|1NGI|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
pdb|1NGJ|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
pdb|3HSC|A Chain A, Three-Dimensional Structure Of The Atpase Fragment Of A
70k Heat-Shock Cognate Protein
Length = 386
Score = 380 bits (976), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/385 (50%), Positives = 263/385 (68%), Gaps = 12/385 (3%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
+G+DLGTT SCV V + ++I N +G RTTPS VAF E L+G AK Q NP N
Sbjct: 7 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTN 65
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVN-APNGDAWVEANGQ--QYSPSQIGAFVLT 172
T+F KRLIGRRF+DA Q +MK PF +VN A VE G+ + P ++ + VLT
Sbjct: 66 TVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLT 125
Query: 173 KMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGM 232
KMKE AE+YLGK+V+ AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA++YG+
Sbjct: 126 KMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 185
Query: 233 NNKEGL---IAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEF 289
+ K G + +FDLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFDN ++ ++EF
Sbjct: 186 DKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEF 245
Query: 290 KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSK 349
KR + D+S++K A++RLR + E+AK LSS++Q I + + ++TR++
Sbjct: 246 KRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGID----FYTSITRAR 301
Query: 350 FETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSPSK 408
FE L L T P + L+DA + + +++LVGG TR+PK+Q+++ + F GK +K
Sbjct: 302 FEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNK 361
Query: 409 GVNPDEAVALGAAIQGGILRGDVKE 433
+NPDEAVA GAA+Q IL GD E
Sbjct: 362 SINPDEAVAYGAAVQAAILSGDKSE 386
>pdb|2QWN|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-386aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi State
pdb|2QWO|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi Form #1
pdb|2QWP|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi Form #2
pdb|2QWQ|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The Amppnp Hydrolyzed Form
pdb|2QWR|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The Amppnp Intact Form
Length = 394
Score = 380 bits (975), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/393 (50%), Positives = 268/393 (68%), Gaps = 16/393 (4%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
+G+DLGTT SCV V + ++I N +G RTTPS VAF E L+G AK Q NP N
Sbjct: 7 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTN 65
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVN-APNGDAWVEANGQ--QYSPSQIGAFVLT 172
T+F KRLIGRRF+DA Q +MK PF +VN A VE G+ + P ++ + VLT
Sbjct: 66 TVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLT 125
Query: 173 KMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGM 232
KMKE AE+YLGK+V+ AV+TVPAYFND+QRQATKDAG IAGL+V IINEPTAAA++YG+
Sbjct: 126 KMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLCIINEPTAAAIAYGL 185
Query: 233 NNKEGL---IAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEF 289
+ K G + +FDLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFDN ++ ++EF
Sbjct: 186 DKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEF 245
Query: 290 KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSK 349
KR + D+S++K A++RLR + E+AK LSS++Q I + + ++TR++
Sbjct: 246 KRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGID----FYTSITRAR 301
Query: 350 FETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSPSK 408
FE L L T P + L+DA + + +++LVGG TR+PK+Q+++ + F GK +K
Sbjct: 302 FEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNK 361
Query: 409 GVNPDEAVALGAAIQGGILRGD----VKELLLL 437
+NPDEAVA GAA+Q IL GD V++LLLL
Sbjct: 362 SINPDEAVAYGAAVQAAILSGDKSENVQDLLLL 394
>pdb|1NGB|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 379 bits (973), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/385 (50%), Positives = 263/385 (68%), Gaps = 12/385 (3%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
+G+DLGTT SCV V + ++I N +G RTTPS VAF E L+G AK Q NP N
Sbjct: 7 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTN 65
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVN-APNGDAWVEANGQ--QYSPSQIGAFVLT 172
T+F KRLIGRRF+DA Q +MK PF +VN A VE G+ + P ++ + VLT
Sbjct: 66 TVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLT 125
Query: 173 KMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGM 232
KMKE AE+YLGK+V+ AV+TVPAYFND+QRQATKDAG IAGL+V RIIN+PTAAA++YG+
Sbjct: 126 KMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINQPTAAAIAYGL 185
Query: 233 NNKEGL---IAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEF 289
+ K G + +FDLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFDN ++ ++EF
Sbjct: 186 DKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEF 245
Query: 290 KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSK 349
KR + D+S++K A++RLR + E+AK LSS++Q I + + ++TR++
Sbjct: 246 KRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGID----FYTSITRAR 301
Query: 350 FETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSPSK 408
FE L L T P + L+DA + + +++LVGG TR+PK+Q+++ + F GK +K
Sbjct: 302 FEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNK 361
Query: 409 GVNPDEAVALGAAIQGGILRGDVKE 433
+NPDEAVA GAA+Q IL GD E
Sbjct: 362 SINPDEAVAYGAAVQAAILSGDKSE 386
>pdb|1BUP|A Chain A, T13s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 386
Score = 379 bits (973), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/385 (50%), Positives = 263/385 (68%), Gaps = 12/385 (3%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
+G+DLG+T SCV V + ++I N +G RTTPS VAF E L+G AK Q NP N
Sbjct: 7 VGIDLGSTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTN 65
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVN-APNGDAWVEANGQ--QYSPSQIGAFVLT 172
T+F KRLIGRRF+DA Q +MK PF +VN A VE G+ + P ++ + VLT
Sbjct: 66 TVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLT 125
Query: 173 KMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGM 232
KMKE AE+YLGK+V+ AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA++YG+
Sbjct: 126 KMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 185
Query: 233 NNKEGL---IAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEF 289
+ K G + +FDLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFDN ++ ++EF
Sbjct: 186 DKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEF 245
Query: 290 KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSK 349
KR + D+S++K A++RLR + E+AK LSS++Q I + + ++TR++
Sbjct: 246 KRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGID----FYTSITRAR 301
Query: 350 FETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSPSK 408
FE L L T P + L+DA + + +++LVGG TR+PK+Q+++ + F GK +K
Sbjct: 302 FEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNK 361
Query: 409 GVNPDEAVALGAAIQGGILRGDVKE 433
+NPDEAVA GAA+Q IL GD E
Sbjct: 362 SINPDEAVAYGAAVQAAILSGDKSE 386
>pdb|3KVG|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Amppnp
pdb|3KVG|B Chain B, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Amppnp
pdb|3L4I|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Adp And Inorganic Phosphate
pdb|3L4I|B Chain B, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Adp And Inorganic Phosphate
pdb|3L6Q|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70 From
Cryptosporidium Parvum (Cgd2_20)
pdb|3L6Q|B Chain B, Crystal Structure Of The N-Terminal Domain Of Hsp70 From
Cryptosporidium Parvum (Cgd2_20)
Length = 400
Score = 378 bits (971), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/388 (51%), Positives = 258/388 (66%), Gaps = 14/388 (3%)
Query: 52 GNDVIGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVT 111
G IG+DLGTT SCV V ++ N +G RTTPS VAF + E L+G AK Q
Sbjct: 18 GGPAIGIDLGTTYSCVGVWRNDTVDIVPNDQGNRTTPSYVAFTET-ERLIGDAAKNQVAR 76
Query: 112 NPANTLFGTKRLIGRRFNDAQTQKEMKMVPFKIVNAPNGDAWVEAN----GQQYSPSQIG 167
NP NT+F KRLIGR+F+D Q +M PFK+V P + N +++ +I
Sbjct: 77 NPENTVFDAKRLIGRKFDDQAVQSDMTHWPFKVVRGPKDKPIISVNYLGEKKEFHAEEIS 136
Query: 168 AFVLTKMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAA 227
A VL KMKE +E+YLG+ + AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA
Sbjct: 137 AMVLQKMKEISEAYLGRQIKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAA 196
Query: 228 LSYGMNNK---EGLIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEF 284
++YG++ K E + +FDLGGGTFDVS+L I +G+FEVKAT GDT LGGEDFDN L+EF
Sbjct: 197 IAYGLDKKGTGERNVLIFDLGGGTFDVSLLTIEDGIFEVKATAGDTHLGGEDFDNRLVEF 256
Query: 285 LVSEFKRTER-IDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNI 343
V +FKR R +DL+ + AL+RLR E+AK LSS++Q I L + G + ++
Sbjct: 257 CVQDFKRKNRGMDLTTNARALRRLRTQCERAKRTLSSSTQATIELDSLY---EGIDY-SV 312
Query: 344 TLTRSKFETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF- 402
++R++FE L T AP + LKDA + + V +V+LVGG TR+PKVQ ++ E F
Sbjct: 313 AISRARFEELCADYFRATLAPVEKVLKDAGMDKRSVHDVVLVGGSTRIPKVQALIQEFFN 372
Query: 403 GKSPSKGVNPDEAVALGAAIQGGILRGD 430
GK P K +NPDEAVA GAA+Q IL G+
Sbjct: 373 GKEPCKAINPDEAVAYGAAVQAAILNGE 400
>pdb|1ATR|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences
The Structure Of The Active Site But Is Not Essential
For Atp Hydrolysis
Length = 386
Score = 378 bits (971), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/385 (50%), Positives = 262/385 (68%), Gaps = 12/385 (3%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
+G+DLGTT SCV V + ++I N +G RTTPS VAF E L+G AK Q NP N
Sbjct: 7 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTN 65
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVN-APNGDAWVEANGQ--QYSPSQIGAFVLT 172
T+F KRLIGRRF+DA Q +MK PF +VN A VE G+ + P ++ + VLT
Sbjct: 66 TVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLT 125
Query: 173 KMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGM 232
KMKE AE+YLGK+V+ AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA++YG+
Sbjct: 126 KMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 185
Query: 233 NNKEGL---IAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEF 289
+ K G + +FDLGGG FDVS+L I +G+FEVK+T GDT LGGEDFDN ++ ++EF
Sbjct: 186 DKKVGAERNVLIFDLGGGVFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEF 245
Query: 290 KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSK 349
KR + D+S++K A++RLR + E+AK LSS++Q I + + ++TR++
Sbjct: 246 KRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGID----FYTSITRAR 301
Query: 350 FETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSPSK 408
FE L L T P + L+DA + + +++LVGG TR+PK+Q+++ + F GK +K
Sbjct: 302 FEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNK 361
Query: 409 GVNPDEAVALGAAIQGGILRGDVKE 433
+NPDEAVA GAA+Q IL GD E
Sbjct: 362 SINPDEAVAYGAAVQAAILSGDKSE 386
>pdb|1NGD|A Chain A, Structural Basis Of The 70-kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 378 bits (971), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/385 (50%), Positives = 263/385 (68%), Gaps = 12/385 (3%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
+G+DLGTT SCV V + ++I N +G RTTPS VAF E L+G AK Q NP N
Sbjct: 7 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTN 65
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVN-APNGDAWVEANGQ--QYSPSQIGAFVLT 172
T+F KRLIGRRF+DA Q +MK PF +VN A VE G+ + P ++ + VLT
Sbjct: 66 TVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLT 125
Query: 173 KMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGM 232
KMKE AE+YLGK+V+ AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA++YG+
Sbjct: 126 KMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 185
Query: 233 NNKEGL---IAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEF 289
+ K G + +FDLGGGTF+VS+L I +G+FEVK+T GDT LGGEDFDN ++ ++EF
Sbjct: 186 DKKVGAERNVLIFDLGGGTFNVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEF 245
Query: 290 KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSK 349
KR + D+S++K A++RLR + E+AK LSS++Q I + + ++TR++
Sbjct: 246 KRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGID----FYTSITRAR 301
Query: 350 FETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSPSK 408
FE L L T P + L+DA + + +++LVGG TR+PK+Q+++ + F GK +K
Sbjct: 302 FEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNK 361
Query: 409 GVNPDEAVALGAAIQGGILRGDVKE 433
+NPDEAVA GAA+Q IL GD E
Sbjct: 362 SINPDEAVAYGAAVQAAILSGDKSE 386
>pdb|1NGF|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 378 bits (971), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/385 (50%), Positives = 263/385 (68%), Gaps = 12/385 (3%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
+G+DLGTT SCV V + ++I N +G RTTPS VAF E L+G AK Q NP N
Sbjct: 7 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTN 65
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVN-APNGDAWVEANGQ--QYSPSQIGAFVLT 172
T+F KRLIGRRF+DA Q +MK PF +VN A VE G+ + P ++ + VLT
Sbjct: 66 TVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLT 125
Query: 173 KMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGM 232
KMKE AE+YLGK+V+ AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA++YG+
Sbjct: 126 KMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 185
Query: 233 NNKEGL---IAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEF 289
+ K G + +F+LGGGTFDVS+L I +G+FEVK+T GDT LGGEDFDN ++ ++EF
Sbjct: 186 DKKVGAERNVLIFNLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEF 245
Query: 290 KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSK 349
KR + D+S++K A++RLR + E+AK LSS++Q I + + ++TR++
Sbjct: 246 KRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGID----FYTSITRAR 301
Query: 350 FETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSPSK 408
FE L L T P + L+DA + + +++LVGG TR+PK+Q+++ + F GK +K
Sbjct: 302 FEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNK 361
Query: 409 GVNPDEAVALGAAIQGGILRGDVKE 433
+NPDEAVA GAA+Q IL GD E
Sbjct: 362 SINPDEAVAYGAAVQAAILSGDKSE 386
>pdb|1NGH|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 378 bits (971), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/385 (50%), Positives = 263/385 (68%), Gaps = 12/385 (3%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
+G++LGTT SCV V + ++I N +G RTTPS VAF E L+G AK Q NP N
Sbjct: 7 VGINLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTN 65
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVN-APNGDAWVEANGQ--QYSPSQIGAFVLT 172
T+F KRLIGRRF+DA Q +MK PF +VN A VE G+ + P ++ + VLT
Sbjct: 66 TVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLT 125
Query: 173 KMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGM 232
KMKE AE+YLGK+V+ AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA++YG+
Sbjct: 126 KMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 185
Query: 233 NNKEGL---IAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEF 289
+ K G + +FDLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFDN ++ ++EF
Sbjct: 186 DKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEF 245
Query: 290 KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSK 349
KR + D+S++K A++RLR + E+AK LSS++Q I + + ++TR++
Sbjct: 246 KRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGID----FYTSITRAR 301
Query: 350 FETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSPSK 408
FE L L T P + L+DA + + +++LVGG TR+PK+Q+++ + F GK +K
Sbjct: 302 FEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNK 361
Query: 409 GVNPDEAVALGAAIQGGILRGDVKE 433
+NPDEAVA GAA+Q IL GD E
Sbjct: 362 SINPDEAVAYGAAVQAAILSGDKSE 386
>pdb|1NGA|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 378 bits (971), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/385 (50%), Positives = 262/385 (68%), Gaps = 12/385 (3%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
+G+DLGTT SCV V + ++I N +G RTTPS VAF E L+G AK Q NP N
Sbjct: 7 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTN 65
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVN-APNGDAWVEANGQ--QYSPSQIGAFVLT 172
T+F KRLIGRRF+DA Q +MK PF +VN A VE G+ + P ++ + VLT
Sbjct: 66 TVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLT 125
Query: 173 KMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGM 232
KMKE AE+YLGK+V+ AV+TVPAYFND+QRQATKDAG IAGL+V RIIN PTAAA++YG+
Sbjct: 126 KMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINSPTAAAIAYGL 185
Query: 233 NNKEGL---IAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEF 289
+ K G + +FDLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFDN ++ ++EF
Sbjct: 186 DKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEF 245
Query: 290 KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSK 349
KR + D+S++K A++RLR + E+AK LSS++Q I + + ++TR++
Sbjct: 246 KRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGID----FYTSITRAR 301
Query: 350 FETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSPSK 408
FE L L T P + L+DA + + +++LVGG TR+PK+Q+++ + F GK +K
Sbjct: 302 FEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNK 361
Query: 409 GVNPDEAVALGAAIQGGILRGDVKE 433
+NPDEAVA GAA+Q IL GD E
Sbjct: 362 SINPDEAVAYGAAVQAAILSGDKSE 386
>pdb|1ATS|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences
The Structure Of The Active Site But Is Not Essential
For Atp Hydrolysis
Length = 386
Score = 378 bits (970), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/385 (50%), Positives = 262/385 (68%), Gaps = 12/385 (3%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
+G+DLGTT SCV V + ++I N +G RTTPS VAF E L+G AK Q NP N
Sbjct: 7 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTN 65
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVN-APNGDAWVEANGQ--QYSPSQIGAFVLT 172
T+F KRLIGRRF+DA Q +MK PF +VN A VE G+ + P ++ + VLT
Sbjct: 66 TVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLT 125
Query: 173 KMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGM 232
KMKE AE+YLGK+V+ AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA++YG+
Sbjct: 126 KMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 185
Query: 233 NNKEGL---IAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEF 289
+ K G + +FDLGGG FDVS+L I +G+FEVK+T GDT LGGEDFDN ++ ++EF
Sbjct: 186 DKKVGAERNVLIFDLGGGEFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEF 245
Query: 290 KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSK 349
KR + D+S++K A++RLR + E+AK LSS++Q I + + ++TR++
Sbjct: 246 KRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGID----FYTSITRAR 301
Query: 350 FETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSPSK 408
FE L L T P + L+DA + + +++LVGG TR+PK+Q+++ + F GK +K
Sbjct: 302 FEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNK 361
Query: 409 GVNPDEAVALGAAIQGGILRGDVKE 433
+NPDEAVA GAA+Q IL GD E
Sbjct: 362 SINPDEAVAYGAAVQAAILSGDKSE 386
>pdb|3GL1|A Chain A, Crystal Structure Of Atpase Domain Of Ssb1 Chaperone, A
Member Of The Hsp70 Family, From Saccharomyces
Cerevisiae
pdb|3GL1|B Chain B, Crystal Structure Of Atpase Domain Of Ssb1 Chaperone, A
Member Of The Hsp70 Family, From Saccharomyces
Cerevisiae
Length = 387
Score = 378 bits (970), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/381 (52%), Positives = 266/381 (69%), Gaps = 16/381 (4%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
IG+DLGTT SCVA E + ++I N +G R TPS VAF + E L+G AK QA NP N
Sbjct: 13 IGIDLGTTYSCVATYES-SVEIIANEQGNRVTPSFVAFTPE-ERLIGDAAKNQAALNPRN 70
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVNAPNGDAWVEAN----GQQYSPSQIGAFVL 171
T+F KRLIGRRF+D QK+MK PFK+++ +G+ +E + +SP +I A VL
Sbjct: 71 TVFDAKRLIGRRFDDESVQKDMKTWPFKVIDV-DGNPVIEVQYLEETKTFSPQEISAMVL 129
Query: 172 TKMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYG 231
TKMKE AE+ +GK V +AVITVPAYFNDAQRQATKDAG I+GL+V RIINEPTAAA++YG
Sbjct: 130 TKMKEIAEAKIGKKVEKAVITVPAYFNDAQRQATKDAGAISGLNVLRIINEPTAAAIAYG 189
Query: 232 M----NNKEGLIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVS 287
+ + KE + +FDLGGGTFDVS+L I+ GV+ VK+T+G+T LGG+DFD LLE +
Sbjct: 190 LGAGKSEKERHVLIFDLGGGTFDVSLLHIAGGVYTVKSTSGNTHLGGQDFDTNLLEHFKA 249
Query: 288 EFKRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTR 347
EFK+ +D+S D AL+RLR +AE+AK LSS +QT + + + + +LTR
Sbjct: 250 EFKKKTGLDISDDARALRRLRTAAERAKRTLSSVTQTTVEVDSLF----DGEDFESSLTR 305
Query: 348 SKFETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSP 406
++FE L L + T P + LKDA I+ +DEV+LVGG TR+PKVQ+++++ F GK
Sbjct: 306 ARFEDLNAALFKSTLEPVEQVLKDAKISKSQIDEVVLVGGSTRIPKVQKLLSDFFDGKQL 365
Query: 407 SKGVNPDEAVALGAAIQGGIL 427
K +NPDEAVA GAA+QG IL
Sbjct: 366 EKSINPDEAVAYGAAVQGAIL 386
>pdb|1NGG|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 377 bits (969), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/385 (50%), Positives = 262/385 (68%), Gaps = 12/385 (3%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
+G+ LGTT SCV V + ++I N +G RTTPS VAF E L+G AK Q NP N
Sbjct: 7 VGISLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTN 65
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVN-APNGDAWVEANGQ--QYSPSQIGAFVLT 172
T+F KRLIGRRF+DA Q +MK PF +VN A VE G+ + P ++ + VLT
Sbjct: 66 TVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLT 125
Query: 173 KMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGM 232
KMKE AE+YLGK+V+ AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA++YG+
Sbjct: 126 KMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 185
Query: 233 NNKEGL---IAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEF 289
+ K G + +FDLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFDN ++ ++EF
Sbjct: 186 DKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEF 245
Query: 290 KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSK 349
KR + D+S++K A++RLR + E+AK LSS++Q I + + ++TR++
Sbjct: 246 KRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGID----FYTSITRAR 301
Query: 350 FETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSPSK 408
FE L L T P + L+DA + + +++LVGG TR+PK+Q+++ + F GK +K
Sbjct: 302 FEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNK 361
Query: 409 GVNPDEAVALGAAIQGGILRGDVKE 433
+NPDEAVA GAA+Q IL GD E
Sbjct: 362 SINPDEAVAYGAAVQAAILSGDKSE 386
>pdb|1NGC|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 377 bits (969), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/385 (50%), Positives = 262/385 (68%), Gaps = 12/385 (3%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
+G+DLGTT SCV V + ++I N +G RTTPS VAF E L+G AK Q NP N
Sbjct: 7 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTN 65
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVN-APNGDAWVEANGQ--QYSPSQIGAFVLT 172
T+F KRLIGRRF+DA Q +MK PF +VN A VE G+ + P ++ + VLT
Sbjct: 66 TVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLT 125
Query: 173 KMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGM 232
KMKE AE+YLGK+V+ AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA++YG+
Sbjct: 126 KMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 185
Query: 233 NNKEGL---IAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEF 289
+ K G + +FDLGGGTF VS+L I +G+FEVK+T GDT LGGEDFDN ++ ++EF
Sbjct: 186 DKKVGAERNVLIFDLGGGTFSVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEF 245
Query: 290 KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSK 349
KR + D+S++K A++RLR + E+AK LSS++Q I + + ++TR++
Sbjct: 246 KRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGID----FYTSITRAR 301
Query: 350 FETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSPSK 408
FE L L T P + L+DA + + +++LVGG TR+PK+Q+++ + F GK +K
Sbjct: 302 FEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNK 361
Query: 409 GVNPDEAVALGAAIQGGILRGDVKE 433
+NPDEAVA GAA+Q IL GD E
Sbjct: 362 SINPDEAVAYGAAVQAAILSGDKSE 386
>pdb|1NGE|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 377 bits (969), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/385 (50%), Positives = 262/385 (68%), Gaps = 12/385 (3%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
+G+DLGTT SCV V + ++I N +G RTTPS VAF E L+G AK Q NP N
Sbjct: 7 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTN 65
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVN-APNGDAWVEANGQ--QYSPSQIGAFVLT 172
T+F KRLIGRRF+DA Q +MK PF +VN A VE G+ + P ++ + VLT
Sbjct: 66 TVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLT 125
Query: 173 KMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGM 232
KMKE AE+YLGK+V+ AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA++YG+
Sbjct: 126 KMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 185
Query: 233 NNKEGL---IAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEF 289
+ K G + +F LGGGTFDVS+L I +G+FEVK+T GDT LGGEDFDN ++ ++EF
Sbjct: 186 DKKVGAERNVLIFSLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEF 245
Query: 290 KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSK 349
KR + D+S++K A++RLR + E+AK LSS++Q I + + ++TR++
Sbjct: 246 KRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGID----FYTSITRAR 301
Query: 350 FETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSPSK 408
FE L L T P + L+DA + + +++LVGG TR+PK+Q+++ + F GK +K
Sbjct: 302 FEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNK 361
Query: 409 GVNPDEAVALGAAIQGGILRGDVKE 433
+NPDEAVA GAA+Q IL GD E
Sbjct: 362 SINPDEAVAYGAAVQAAILSGDKSE 386
>pdb|1BA0|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal
1nge 3
Length = 386
Score = 377 bits (968), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/385 (50%), Positives = 262/385 (68%), Gaps = 12/385 (3%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
+G+DLGTT SCV V + ++I N +G RTTPS VAF E L+G AK Q NP N
Sbjct: 7 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTN 65
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVN-APNGDAWVEANGQ--QYSPSQIGAFVLT 172
T+F KRLIGRRF+DA Q +MK PF +VN A VE G+ + P ++ + VLT
Sbjct: 66 TVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLT 125
Query: 173 KMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGM 232
KMKE AE+YLGK+V+ AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA++YG+
Sbjct: 126 KMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 185
Query: 233 NNKEGL---IAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEF 289
+ K G + +FDLGGGTF VS+L I +G+FEVK+T GDT LGGEDFDN ++ ++EF
Sbjct: 186 DKKVGAERNVLIFDLGGGTFKVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEF 245
Query: 290 KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSK 349
KR + D+S++K A++RLR + E+AK LSS++Q I + + ++TR++
Sbjct: 246 KRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGID----FYTSITRAR 301
Query: 350 FETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSPSK 408
FE L L T P + L+DA + + +++LVGG TR+PK+Q+++ + F GK +K
Sbjct: 302 FEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNK 361
Query: 409 GVNPDEAVALGAAIQGGILRGDVKE 433
+NPDEAVA GAA+Q IL GD E
Sbjct: 362 SINPDEAVAYGAAVQAAILSGDKSE 386
>pdb|3CQX|A Chain A, Chaperone Complex
pdb|3CQX|B Chain B, Chaperone Complex
Length = 386
Score = 375 bits (963), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/379 (50%), Positives = 260/379 (68%), Gaps = 12/379 (3%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
+G+DLGTT SCV V + ++I N +G RTTPS VAF E L+G AK Q NP N
Sbjct: 12 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTN 70
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVN-APNGDAWVEANGQ--QYSPSQIGAFVLT 172
T+F KRLIGRRF+DA Q +MK PF +VN A VE G+ + P ++ + VLT
Sbjct: 71 TVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLT 130
Query: 173 KMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGM 232
KMKE AE+YLGK+V+ AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA++YG+
Sbjct: 131 KMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 190
Query: 233 NNKEGL---IAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEF 289
+ K G + +FDLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFDN ++ ++EF
Sbjct: 191 DKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEF 250
Query: 290 KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSK 349
KR + D+S++K A++RLR + E+AK LSS++Q I + + ++TR++
Sbjct: 251 KRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGID----FYTSITRAR 306
Query: 350 FETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSPSK 408
FE L L T P + L+DA + + +++LVGG TR+PK+Q+++ + F GK +K
Sbjct: 307 FEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNK 366
Query: 409 GVNPDEAVALGAAIQGGIL 427
+NPDEAVA GAA+Q IL
Sbjct: 367 SINPDEAVAYGAAVQAAIL 385
>pdb|3FZF|A Chain A, Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH ATP
pdb|3FZH|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3FZK|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3FZL|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3FZM|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3LDQ|A Chain A, Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH SMALL
MOLECULE Inhibitor
pdb|3M3Z|A Chain A, Crystal Structure Of Hsc70/bag1 In Complex With Small
Molecule Inhibitor
Length = 381
Score = 375 bits (963), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/379 (50%), Positives = 260/379 (68%), Gaps = 12/379 (3%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
+G+DLGTT SCV V + ++I N +G RTTPS VAF E L+G AK Q NP N
Sbjct: 7 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTN 65
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVN-APNGDAWVEANGQ--QYSPSQIGAFVLT 172
T+F KRLIGRRF+DA Q +MK PF +VN A VE G+ + P ++ + VLT
Sbjct: 66 TVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLT 125
Query: 173 KMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGM 232
KMKE AE+YLGK+V+ AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA++YG+
Sbjct: 126 KMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 185
Query: 233 NNKEGL---IAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEF 289
+ K G + +FDLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFDN ++ ++EF
Sbjct: 186 DKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEF 245
Query: 290 KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSK 349
KR + D+S++K A++RLR + E+AK LSS++Q I + + ++TR++
Sbjct: 246 KRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGID----FYTSITRAR 301
Query: 350 FETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSPSK 408
FE L L T P + L+DA + + +++LVGG TR+PK+Q+++ + F GK +K
Sbjct: 302 FEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNK 361
Query: 409 GVNPDEAVALGAAIQGGIL 427
+NPDEAVA GAA+Q IL
Sbjct: 362 SINPDEAVAYGAAVQAAIL 380
>pdb|1BA1|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal
Mutant With Cys 17 Replaced By Lys
Length = 386
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/385 (50%), Positives = 262/385 (68%), Gaps = 12/385 (3%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
+G+DLGTT S V V + ++I N +G RTTPS VAF E L+G AK Q NP N
Sbjct: 7 VGIDLGTTYSKVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTN 65
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVN-APNGDAWVEANGQ--QYSPSQIGAFVLT 172
T+F KRLIGRRF+DA Q +MK PF +VN A VE G+ + P ++ + VLT
Sbjct: 66 TVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLT 125
Query: 173 KMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGM 232
KMKE AE+YLGK+V+ AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA++YG+
Sbjct: 126 KMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 185
Query: 233 NNKEGL---IAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEF 289
+ K G + +FDLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFDN ++ ++EF
Sbjct: 186 DKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEF 245
Query: 290 KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSK 349
KR + D+S++K A++RLR + E+AK LSS++Q I + + ++TR++
Sbjct: 246 KRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGID----FYTSITRAR 301
Query: 350 FETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSPSK 408
FE L L T P + L+DA + + +++LVGG TR+PK+Q+++ + F GK +K
Sbjct: 302 FEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNK 361
Query: 409 GVNPDEAVALGAAIQGGILRGDVKE 433
+NPDEAVA GAA+Q IL GD E
Sbjct: 362 SINPDEAVAYGAAVQAAILSGDKSE 386
>pdb|1HX1|A Chain A, Crystal Structure Of A Bag Domain In Complex With The
Hsc70 Atpase Domain
Length = 400
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/379 (50%), Positives = 260/379 (68%), Gaps = 12/379 (3%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
+G+DLGTT SCV V + ++I N +G RTTPS VAF E L+G AK Q NP N
Sbjct: 26 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTN 84
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVN-APNGDAWVEANGQ--QYSPSQIGAFVLT 172
T+F KRLIGRRF+DA Q +MK PF +VN A VE G+ + P ++ + VLT
Sbjct: 85 TVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLT 144
Query: 173 KMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGM 232
KMKE AE+YLGK+V+ AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA++YG+
Sbjct: 145 KMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 204
Query: 233 NNKEGL---IAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEF 289
+ K G + +FDLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFDN ++ ++EF
Sbjct: 205 DKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEF 264
Query: 290 KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSK 349
KR + D+S++K A++RLR + E+AK LSS++Q I + + ++TR++
Sbjct: 265 KRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGID----FYTSITRAR 320
Query: 350 FETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSPSK 408
FE L L T P + L+DA + + +++LVGG TR+PK+Q+++ + F GK +K
Sbjct: 321 FEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNK 380
Query: 409 GVNPDEAVALGAAIQGGIL 427
+NPDEAVA GAA+Q IL
Sbjct: 381 SINPDEAVAYGAAVQAAIL 399
>pdb|2E88|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In The
Apo Form
Length = 391
Score = 374 bits (961), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/397 (50%), Positives = 263/397 (66%), Gaps = 19/397 (4%)
Query: 46 FSARPAGNDVIGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPA 105
F A+ A IG+DLGTT SCV V + ++I N +G RTTPS VAF E L+G A
Sbjct: 3 FMAKAAA---IGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAA 58
Query: 106 KRQAVTNPANTLFGTKRLIGRRFNDAQTQKEMKMVPFKIVN---APNGDAWVEANGQQYS 162
K Q NP NT+F KRLIGR+F D Q +MK PF+++N P + + +
Sbjct: 59 KNQVALNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFY 118
Query: 163 PSQIGAFVLTKMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINE 222
P +I + VLTKMKE AE+YLG V+ AVITVPAYFND+QRQATKDAG IAGL+V RIINE
Sbjct: 119 PEEISSMVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINE 178
Query: 223 PTAAALSYGMNNK---EGLIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDN 279
PTAAA++YG++ E + +FDLGGGTFDVS+L I +G+FEVKAT GDT LGGEDFDN
Sbjct: 179 PTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDN 238
Query: 280 ALLEFLVSEFKRTERIDLSQDKLALQRLRESAEKAKIELSSTSQT--EINLPFITADASG 337
L+ V EFKR + D+SQ+K A++RLR + E+AK LSS++Q EI+ F D
Sbjct: 239 RLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGID--- 295
Query: 338 AKHLNITLTRSKFETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEI 397
++TR++FE L + L T P + L+DA + + +++LVGG TR+PKVQ++
Sbjct: 296 ---FYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKL 352
Query: 398 VTEIF-GKSPSKGVNPDEAVALGAAIQGGILRGDVKE 433
+ + F G+ +K +NPDEAVA GAA+Q IL GD E
Sbjct: 353 LQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSE 389
>pdb|3FE1|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 6
(Hsp70b') Atpase Domain In Complex With Adp And
Inorganic Phosphate
pdb|3FE1|B Chain B, Crystal Structure Of The Human 70kda Heat Shock Protein 6
(Hsp70b') Atpase Domain In Complex With Adp And
Inorganic Phosphate
pdb|3FE1|C Chain C, Crystal Structure Of The Human 70kda Heat Shock Protein 6
(Hsp70b') Atpase Domain In Complex With Adp And
Inorganic Phosphate
Length = 403
Score = 374 bits (960), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/384 (51%), Positives = 257/384 (66%), Gaps = 16/384 (4%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
+G+DLGTT SCV V + +++ N +G RTTPS VAF E LVG AK QA NP N
Sbjct: 27 VGIDLGTTYSCVGVFQQGRVEILANDQGNRTTPSYVAFTDT-ERLVGDAAKSQAALNPHN 85
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVN---APNGDAWVEANGQQYSPSQIGAFVLT 172
T+F KRLIGR+F D Q +MK PF++V+ P + + P +I + VL+
Sbjct: 86 TVFDAKRLIGRKFADTTVQSDMKHWPFRVVSEGGKPKVRVCYRGEDKTFYPEEISSMVLS 145
Query: 173 KMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGM 232
KMKETAE+YLG+ V AVITVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA++YG+
Sbjct: 146 KMKETAEAYLGQPVKHAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGL 205
Query: 233 NNK---EGLIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEF 289
+ + E + +FDLGGGTFDVSVL I GVFEVKAT GDT LGGEDFDN L+ + EF
Sbjct: 206 DRRGAGERNVLIFDLGGGTFDVSVLSIDAGVFEVKATAGDTHLGGEDFDNRLVNHFMEEF 265
Query: 290 KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQT--EINLPFITADASGAKHLNITLTR 347
+R DLS +K AL+RLR + E+AK LSS++Q EI+ F D ++TR
Sbjct: 266 RRKHGKDLSGNKRALRRLRTACERAKRTLSSSTQATLEIDSLFEGVD------FYTSITR 319
Query: 348 SKFETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSP 406
++FE L + L T P + L+DA + + +V+LVGG TR+PKVQ+++ + F GK
Sbjct: 320 ARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDVVLVGGSTRIPKVQKLLQDFFNGKEL 379
Query: 407 SKGVNPDEAVALGAAIQGGILRGD 430
+K +NPDEAVA GAA+Q +L GD
Sbjct: 380 NKSINPDEAVAYGAAVQAAVLMGD 403
>pdb|2E8A|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In
Complex With Amp-Pnp
Length = 391
Score = 374 bits (960), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/387 (50%), Positives = 259/387 (66%), Gaps = 16/387 (4%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
IG+DLGTT SCV V + ++I N +G RTTPS VAF E L+G AK Q NP N
Sbjct: 10 IGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVALNPQN 68
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVN---APNGDAWVEANGQQYSPSQIGAFVLT 172
T+F KRLIGR+F D Q +MK PF+++N P + + + P +I + VLT
Sbjct: 69 TVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISSMVLT 128
Query: 173 KMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGM 232
KMKE AE+YLG V+ AVITVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA++YG+
Sbjct: 129 KMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGL 188
Query: 233 NNK---EGLIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEF 289
+ E + +FDLGGGTFDVS+L I +G+FEVKAT GDT LGGEDFDN L+ V EF
Sbjct: 189 DRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHFVEEF 248
Query: 290 KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQT--EINLPFITADASGAKHLNITLTR 347
KR + D+SQ+K A++RLR + E+AK LSS++Q EI+ F D ++TR
Sbjct: 249 KRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGID------FYTSITR 302
Query: 348 SKFETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSP 406
++FE L + L T P + L+DA + + +++LVGG TR+PKVQ+++ + F G+
Sbjct: 303 ARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDL 362
Query: 407 SKGVNPDEAVALGAAIQGGILRGDVKE 433
+K +NPDEAVA GAA+Q IL GD E
Sbjct: 363 NKSINPDEAVAYGAAVQAAILMGDKSE 389
>pdb|3A8Y|A Chain A, Crystal Structure Of The Complex Between The Bag5 Bd5 And
Hsp70 Nbd
pdb|3A8Y|B Chain B, Crystal Structure Of The Complex Between The Bag5 Bd5 And
Hsp70 Nbd
pdb|3ATU|A Chain A, Crystal Structure Of Human Hsp70 Nbd In The Adp- And Mg
Ion-Bound State
pdb|3ATV|A Chain A, Crystal Structure Of Human Hsp70 Nbd In The Adp-Bound And
Mg Ion-Free State
pdb|3AY9|A Chain A, Crystal Structure Of Human Hsp70 Nbd In The Adp-, Mg Ion-,
And K Ion- Bound State
Length = 392
Score = 374 bits (960), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/387 (50%), Positives = 259/387 (66%), Gaps = 16/387 (4%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
IG+DLGTT SCV V + ++I N +G RTTPS VAF E L+G AK Q NP N
Sbjct: 11 IGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVALNPQN 69
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVN---APNGDAWVEANGQQYSPSQIGAFVLT 172
T+F KRLIGR+F D Q +MK PF+++N P + + + P +I + VLT
Sbjct: 70 TVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISSMVLT 129
Query: 173 KMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGM 232
KMKE AE+YLG V+ AVITVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA++YG+
Sbjct: 130 KMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGL 189
Query: 233 NNK---EGLIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEF 289
+ E + +FDLGGGTFDVS+L I +G+FEVKAT GDT LGGEDFDN L+ V EF
Sbjct: 190 DRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHFVEEF 249
Query: 290 KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQT--EINLPFITADASGAKHLNITLTR 347
KR + D+SQ+K A++RLR + E+AK LSS++Q EI+ F D ++TR
Sbjct: 250 KRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGID------FYTSITR 303
Query: 348 SKFETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSP 406
++FE L + L T P + L+DA + + +++LVGG TR+PKVQ+++ + F G+
Sbjct: 304 ARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDL 363
Query: 407 SKGVNPDEAVALGAAIQGGILRGDVKE 433
+K +NPDEAVA GAA+Q IL GD E
Sbjct: 364 NKSINPDEAVAYGAAVQAAILMGDKSE 390
>pdb|3JXU|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 1a
(Hsp70-1) Atpase Domain In Complex With Adp And
Inorganic Phosphate
Length = 409
Score = 374 bits (960), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/387 (50%), Positives = 259/387 (66%), Gaps = 16/387 (4%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
IG+DLGTT SCV V + ++I N +G RTTPS VAF E L+G AK Q NP N
Sbjct: 29 IGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVALNPQN 87
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVN---APNGDAWVEANGQQYSPSQIGAFVLT 172
T+F KRLIGR+F D Q +MK PF+++N P + + + P +I + VLT
Sbjct: 88 TVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISSMVLT 147
Query: 173 KMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGM 232
KMKE AE+YLG V+ AVITVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA++YG+
Sbjct: 148 KMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGL 207
Query: 233 NNK---EGLIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEF 289
+ E + +FDLGGGTFDVS+L I +G+FEVKAT GDT LGGEDFDN L+ V EF
Sbjct: 208 DRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHFVEEF 267
Query: 290 KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQT--EINLPFITADASGAKHLNITLTR 347
KR + D+SQ+K A++RLR + E+AK LSS++Q EI+ F D ++TR
Sbjct: 268 KRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGID------FYTSITR 321
Query: 348 SKFETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSP 406
++FE L + L T P + L+DA + + +++LVGG TR+PKVQ+++ + F G+
Sbjct: 322 ARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDL 381
Query: 407 SKGVNPDEAVALGAAIQGGILRGDVKE 433
+K +NPDEAVA GAA+Q IL GD E
Sbjct: 382 NKSINPDEAVAYGAAVQAAILMGDKSE 408
>pdb|1KAZ|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71e Mutant
Length = 381
Score = 374 bits (959), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/379 (50%), Positives = 260/379 (68%), Gaps = 12/379 (3%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
+G+DLGTT SCV V + ++I N +G RTTPS VAF E L+G AK Q NP N
Sbjct: 7 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTN 65
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVN-APNGDAWVEANGQ--QYSPSQIGAFVLT 172
T+F +RLIGRRF+DA Q +MK PF +VN A VE G+ + P ++ + VLT
Sbjct: 66 TVFDAERLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLT 125
Query: 173 KMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGM 232
KMKE AE+YLGK+V+ AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA++YG+
Sbjct: 126 KMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 185
Query: 233 NNKEGL---IAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEF 289
+ K G + +FDLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFDN ++ ++EF
Sbjct: 186 DKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEF 245
Query: 290 KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSK 349
KR + D+S++K A++RLR + E+AK LSS++Q I + + ++TR++
Sbjct: 246 KRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGID----FYTSITRAR 301
Query: 350 FETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSPSK 408
FE L L T P + L+DA + + +++LVGG TR+PK+Q+++ + F GK +K
Sbjct: 302 FEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNK 361
Query: 409 GVNPDEAVALGAAIQGGIL 427
+NPDEAVA GAA+Q IL
Sbjct: 362 SINPDEAVAYGAAVQAAIL 380
>pdb|1KAX|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71m Mutant
Length = 381
Score = 373 bits (958), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/379 (50%), Positives = 259/379 (68%), Gaps = 12/379 (3%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
+G+DLGTT SCV V + ++I N +G RTTPS VAF E L+G AK Q NP N
Sbjct: 7 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTN 65
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVN-APNGDAWVEANGQ--QYSPSQIGAFVLT 172
T+F RLIGRRF+DA Q +MK PF +VN A VE G+ + P ++ + VLT
Sbjct: 66 TVFDAMRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLT 125
Query: 173 KMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGM 232
KMKE AE+YLGK+V+ AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA++YG+
Sbjct: 126 KMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 185
Query: 233 NNKEGL---IAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEF 289
+ K G + +FDLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFDN ++ ++EF
Sbjct: 186 DKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEF 245
Query: 290 KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSK 349
KR + D+S++K A++RLR + E+AK LSS++Q I + + ++TR++
Sbjct: 246 KRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGID----FYTSITRAR 301
Query: 350 FETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSPSK 408
FE L L T P + L+DA + + +++LVGG TR+PK+Q+++ + F GK +K
Sbjct: 302 FEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNK 361
Query: 409 GVNPDEAVALGAAIQGGIL 427
+NPDEAVA GAA+Q IL
Sbjct: 362 SINPDEAVAYGAAVQAAIL 380
>pdb|1KAY|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71a Mutant
Length = 381
Score = 373 bits (958), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/379 (50%), Positives = 259/379 (68%), Gaps = 12/379 (3%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
+G+DLGTT SCV V + ++I N +G RTTPS VAF E L+G AK Q NP N
Sbjct: 7 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTN 65
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVN-APNGDAWVEANGQ--QYSPSQIGAFVLT 172
T+F RLIGRRF+DA Q +MK PF +VN A VE G+ + P ++ + VLT
Sbjct: 66 TVFDAARLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLT 125
Query: 173 KMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGM 232
KMKE AE+YLGK+V+ AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA++YG+
Sbjct: 126 KMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 185
Query: 233 NNKEGL---IAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEF 289
+ K G + +FDLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFDN ++ ++EF
Sbjct: 186 DKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEF 245
Query: 290 KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSK 349
KR + D+S++K A++RLR + E+AK LSS++Q I + + ++TR++
Sbjct: 246 KRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGID----FYTSITRAR 301
Query: 350 FETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSPSK 408
FE L L T P + L+DA + + +++LVGG TR+PK+Q+++ + F GK +K
Sbjct: 302 FEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNK 361
Query: 409 GVNPDEAVALGAAIQGGIL 427
+NPDEAVA GAA+Q IL
Sbjct: 362 SINPDEAVAYGAAVQAAIL 380
>pdb|3GDQ|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein
1-Like Atpase Domain In Complex With Adp And Inorganic
Phosphate
Length = 408
Score = 373 bits (958), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/382 (50%), Positives = 257/382 (67%), Gaps = 12/382 (3%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
IG+DLGTT SCV V + ++I N +G RTTPS VAF E L+G AK Q NP N
Sbjct: 31 IGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPQN 89
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVN---APNGDAWVEANGQQYSPSQIGAFVLT 172
T+F KRLIGR+FND Q +MK+ PF+++N P + + + P +I + VLT
Sbjct: 90 TVFDAKRLIGRKFNDPVVQADMKLWPFQVINEGGKPKVLVSYKGENKAFYPEEISSMVLT 149
Query: 173 KMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGM 232
K+KETAE++LG V+ AVITVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA++YG+
Sbjct: 150 KLKETAEAFLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGL 209
Query: 233 N---NKEGLIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEF 289
+ E + +FDLGGGTFDVS+L I +G+FEVKAT GDT LGGEDFDN L+ V EF
Sbjct: 210 DKGGQGERHVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVSHFVEEF 269
Query: 290 KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSK 349
KR + D+SQ+K A++RLR + E+AK LSS++Q + + + ++TR++
Sbjct: 270 KRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQANLEIDSLYEGID----FYTSITRAR 325
Query: 350 FETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSPSK 408
FE L L T P + L+DA + + +++LVGG TR+PKVQ ++ + F G+ +K
Sbjct: 326 FEELCADLFRGTLEPVEKALRDAKMDKAKIHDIVLVGGSTRIPKVQRLLQDYFNGRDLNK 385
Query: 409 GVNPDEAVALGAAIQGGILRGD 430
+NPDEAVA GAA+Q IL GD
Sbjct: 386 SINPDEAVAYGAAVQAAILMGD 407
>pdb|2BUP|A Chain A, T13g Mutant Of The Atpase Fragment Of Bovine Hsc70
Length = 381
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/379 (50%), Positives = 259/379 (68%), Gaps = 12/379 (3%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
+G+DLG T SCV V + ++I N +G RTTPS VAF E L+G AK Q NP N
Sbjct: 7 VGIDLGGTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTN 65
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVN-APNGDAWVEANGQ--QYSPSQIGAFVLT 172
T+F KRLIGRRF+DA Q +MK PF +VN A VE G+ + P ++ + VLT
Sbjct: 66 TVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLT 125
Query: 173 KMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGM 232
KMKE AE+YLGK+V+ AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA++YG+
Sbjct: 126 KMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 185
Query: 233 NNKEGL---IAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEF 289
+ K G + +FDLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFDN ++ ++EF
Sbjct: 186 DKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEF 245
Query: 290 KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSK 349
KR + D+S++K A++RLR + E+AK LSS++Q I + + ++TR++
Sbjct: 246 KRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGID----FYTSITRAR 301
Query: 350 FETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSPSK 408
FE L L T P + L+DA + + +++LVGG TR+PK+Q+++ + F GK +K
Sbjct: 302 FEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNK 361
Query: 409 GVNPDEAVALGAAIQGGIL 427
+NPDEAVA GAA+Q IL
Sbjct: 362 SINPDEAVAYGAAVQAAIL 380
>pdb|3D2F|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70
pdb|3D2F|D Chain D, Crystal Structure Of A Complex Of Sse1p And Hsp70
Length = 382
Score = 371 bits (952), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/383 (50%), Positives = 257/383 (67%), Gaps = 16/383 (4%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
IG+DLGTT SCV V + ++I N +G RTTPS VAF E L+G AK Q NP N
Sbjct: 7 IGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVALNPQN 65
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVN---APNGDAWVEANGQQYSPSQIGAFVLT 172
T+F KRLIGR+F D Q +MK PF+++N P + + + P +I + VLT
Sbjct: 66 TVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISSMVLT 125
Query: 173 KMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGM 232
KMKE AE+YLG V+ AVITVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA++YG+
Sbjct: 126 KMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGL 185
Query: 233 NNK---EGLIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEF 289
+ E + +FDLGGGTFDVS+L I +G+FEVKAT GDT LGGEDFDN L+ V EF
Sbjct: 186 DRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHFVEEF 245
Query: 290 KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQT--EINLPFITADASGAKHLNITLTR 347
KR + D+SQ+K A++RLR + E+AK LSS++Q EI+ F D ++TR
Sbjct: 246 KRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGID------FYTSITR 299
Query: 348 SKFETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSP 406
++FE L + L T P + L+DA + + +++LVGG TR+PKVQ+++ + F G+
Sbjct: 300 ARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDL 359
Query: 407 SKGVNPDEAVALGAAIQGGILRG 429
+K +NPDEAVA GAA+Q IL G
Sbjct: 360 NKSINPDEAVAYGAAVQAAILMG 382
>pdb|1HJO|A Chain A, Atpase Domain Of Human Heat Shock 70kda Protein 1
Length = 380
Score = 370 bits (951), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/383 (50%), Positives = 257/383 (67%), Gaps = 16/383 (4%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
IG+DLGTT SCV V + ++I N +G RTTPS VAF E L+G AK Q NP N
Sbjct: 5 IGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVALNPQN 63
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVN---APNGDAWVEANGQQYSPSQIGAFVLT 172
T+F KRLIGR+F D Q +MK PF+++N P + + + P +I + VLT
Sbjct: 64 TVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISSMVLT 123
Query: 173 KMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGM 232
KMKE AE+YLG V+ AVITVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA++YG+
Sbjct: 124 KMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGL 183
Query: 233 NNK---EGLIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEF 289
+ E + +FDLGGGTFDVS+L I +G+FEVKAT GDT LGGEDFDN L+ V EF
Sbjct: 184 DRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHFVEEF 243
Query: 290 KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQT--EINLPFITADASGAKHLNITLTR 347
KR + D+SQ+K A++RLR + E+AK LSS++Q EI+ F D ++TR
Sbjct: 244 KRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGID------FYTSITR 297
Query: 348 SKFETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSP 406
++FE L + L T P + L+DA + + +++LVGG TR+PKVQ+++ + F G+
Sbjct: 298 ARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDL 357
Query: 407 SKGVNPDEAVALGAAIQGGILRG 429
+K +NPDEAVA GAA+Q IL G
Sbjct: 358 NKSINPDEAVAYGAAVQAAILMG 380
>pdb|1S3X|A Chain A, The Crystal Structure Of The Human Hsp70 Atpase Domain
Length = 382
Score = 370 bits (951), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/383 (50%), Positives = 257/383 (67%), Gaps = 16/383 (4%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
IG+DLGTT SC+ V + ++I N +G RTTPS VAF E L+G AK Q NP N
Sbjct: 7 IGIDLGTTYSCIGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVALNPQN 65
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVN---APNGDAWVEANGQQYSPSQIGAFVLT 172
T+F KRLIGR+F D Q +MK PF+++N P + + + P +I + VLT
Sbjct: 66 TVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISSMVLT 125
Query: 173 KMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGM 232
KMKE AE+YLG V+ AVITVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA++YG+
Sbjct: 126 KMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGL 185
Query: 233 NNK---EGLIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEF 289
+ E + +FDLGGGTFDVS+L I +G+FEVKAT GDT LGGEDFDN L+ V EF
Sbjct: 186 DRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHFVEEF 245
Query: 290 KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQT--EINLPFITADASGAKHLNITLTR 347
KR + D+SQ+K A++RLR + E+AK LSS++Q EI+ F D ++TR
Sbjct: 246 KRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGID------FYTSITR 299
Query: 348 SKFETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSP 406
++FE L + L T P + L+DA + + +++LVGG TR+PKVQ+++ + F G+
Sbjct: 300 ARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDL 359
Query: 407 SKGVNPDEAVALGAAIQGGILRG 429
+K +NPDEAVA GAA+Q IL G
Sbjct: 360 NKSINPDEAVAYGAAVQAAILMG 382
>pdb|1QQM|A Chain A, D199s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 378
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/379 (49%), Positives = 255/379 (67%), Gaps = 12/379 (3%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
+G+DLGTT SCV V + ++I N +G RTTPS VAF E L+G AK Q NP N
Sbjct: 4 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTN 62
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVN---APNGDAWVEANGQQYSPSQIGAFVLT 172
T+F KRLIGRRF+DA Q +MK PF +VN AP + + + P ++ + VLT
Sbjct: 63 TVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGAPKVQVEYKGETKSFYPEEVSSMVLT 122
Query: 173 KMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGM 232
KMKE AE+YLG +V+ AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA++YG+
Sbjct: 123 KMKEIAEAYLGATVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 182
Query: 233 NNKEGL---IAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEF 289
+ G + +F LGGGTFDVS+L I +G+FEVK+T GDT LGGEDFDN ++ ++EF
Sbjct: 183 DKAVGAERNVLIFSLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEF 242
Query: 290 KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSK 349
KR D+S++K A++RLR + E+AK LSS++Q I + + ++TR++
Sbjct: 243 KRAHAKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGID----FYTSITRAR 298
Query: 350 FETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSPSK 408
FE L L T P + L+DA + + +++LVGG TR+PK+Q+++ + F GK +K
Sbjct: 299 FEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNK 358
Query: 409 GVNPDEAVALGAAIQGGIL 427
+NPDEAVA GAA+Q IL
Sbjct: 359 SINPDEAVAYGAAVQAAIL 377
>pdb|1QQO|A Chain A, E175s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 378
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/379 (49%), Positives = 257/379 (67%), Gaps = 12/379 (3%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
+G+DLGTT SCV V + ++I N +G RTTPS VAF E L+G AK Q NP N
Sbjct: 4 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTN 62
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVN-APNGDAWVEANGQ--QYSPSQIGAFVLT 172
T+F KRLIGRRF+DA Q +MK PF +VN A VE G+ + P ++ + VLT
Sbjct: 63 TVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLT 122
Query: 173 KMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGM 232
KMKE AE+YLG +V+ AV+TVPAYFND+QRQATKDAG IAGL+V RIIN PTAAA++YG+
Sbjct: 123 KMKEIAEAYLGATVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINSPTAAAIAYGL 182
Query: 233 NNKEGL---IAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEF 289
+ G + +FDLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFDN ++ ++EF
Sbjct: 183 DKAVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEF 242
Query: 290 KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSK 349
KR + D+S++K A++RLR + E+AK LSS++Q I + + ++TR++
Sbjct: 243 KRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGID----FYTSITRAR 298
Query: 350 FETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSPSK 408
FE L L T P + L+DA + + +++LVGG TR+PK+Q+++ + F GK +K
Sbjct: 299 FEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNK 358
Query: 409 GVNPDEAVALGAAIQGGIL 427
+NPDEAVA GAA+Q IL
Sbjct: 359 SINPDEAVAYGAAVQAAIL 377
>pdb|3I33|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 2
(Hsp70-2) Atpase Domain In Complex With Adp And
Inorganic Phosphate
Length = 404
Score = 368 bits (944), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/394 (49%), Positives = 257/394 (65%), Gaps = 18/394 (4%)
Query: 46 FSARPAGNDVIGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPA 105
F + PA IG+DLGTT SCV V + ++I N +G RTTPS VAF E L+G A
Sbjct: 20 FQSMPA----IGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAA 74
Query: 106 KRQAVTNPANTLFGTKRLIGRRFNDAQTQKEMKMVPFKIVN---APNGDAWVEANGQQYS 162
K Q NP NT+F KRLIGR+F DA Q +MK PF++V+ P + + +
Sbjct: 75 KNQVAMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGETKTFF 134
Query: 163 PSQIGAFVLTKMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINE 222
P +I + VLTKMKE AE+YLG V AVITVPAYFND+QRQATKDAG I GL+V RIINE
Sbjct: 135 PEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINE 194
Query: 223 PTAAALSYGMNNK-----EGLIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDF 277
PTAAA++YG++ K E + +FDLGGGTFDVS+L I +G+FEVK+T GDT LGGEDF
Sbjct: 195 PTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 254
Query: 278 DNALLEFLVSEFKRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASG 337
DN ++ L EFKR + D+ +K A++RLR + E+AK LSS++Q I + +
Sbjct: 255 DNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVD- 313
Query: 338 AKHLNITLTRSKFETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEI 397
++TR++FE L L T P + L+DA + + E++LVGG TR+PK+Q++
Sbjct: 314 ---FYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKL 370
Query: 398 VTEIF-GKSPSKGVNPDEAVALGAAIQGGILRGD 430
+ + F GK +K +NPDEAVA GAA+Q IL GD
Sbjct: 371 LQDFFNGKELNKSINPDEAVAYGAAVQAAILIGD 404
>pdb|3D2E|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
pdb|3D2E|D Chain D, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
Length = 382
Score = 364 bits (935), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/383 (50%), Positives = 255/383 (66%), Gaps = 16/383 (4%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
IG+DLGTT SCV V + ++I N +G RTTPS VAF E L+G AK Q NP N
Sbjct: 7 IGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVALNPQN 65
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVN---APNGDAWVEANGQQYSPSQIGAFVLT 172
T+F KRLIGR+F D Q + K PF+++N P + + + P +I + VLT
Sbjct: 66 TVFDAKRLIGRKFGDPVVQSDXKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISSXVLT 125
Query: 173 KMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGM 232
K KE AE+YLG V+ AVITVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA++YG+
Sbjct: 126 KXKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGL 185
Query: 233 NNK---EGLIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEF 289
+ E + +FDLGGGTFDVS+L I +G+FEVKAT GDT LGGEDFDN L+ V EF
Sbjct: 186 DRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHFVEEF 245
Query: 290 KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQT--EINLPFITADASGAKHLNITLTR 347
KR + D+SQ+K A++RLR + E+AK LSS++Q EI+ F D ++TR
Sbjct: 246 KRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGID------FYTSITR 299
Query: 348 SKFETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSP 406
++FE L + L T P + L+DA + + +++LVGG TR+PKVQ+++ + F G+
Sbjct: 300 ARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDL 359
Query: 407 SKGVNPDEAVALGAAIQGGILRG 429
+K +NPDEAVA GAA+Q IL G
Sbjct: 360 NKSINPDEAVAYGAAVQAAILXG 382
>pdb|1QQN|A Chain A, D206s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 378
Score = 362 bits (930), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/379 (48%), Positives = 253/379 (66%), Gaps = 12/379 (3%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
+G+DLGTT SCV V + ++I N +G RTTPS VAF E L+G AK Q NP N
Sbjct: 4 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTN 62
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVN---APNGDAWVEANGQQYSPSQIGAFVLT 172
T+F KRLIGR F+DA Q +MK PF +VN AP + + + P ++ + VLT
Sbjct: 63 TVFDAKRLIGRAFDDAVVQSDMKHWPFMVVNDAGAPKVQVEYKGETKSFYPEEVSSMVLT 122
Query: 173 KMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGM 232
KMKE AE+YLG +V+ AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA++YG+
Sbjct: 123 KMKEIAEAYLGATVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 182
Query: 233 NNKEGL---IAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEF 289
+ G + +FDLGGGTF VS+L I +G+FEVK+T GDT LGGEDFDN ++ ++EF
Sbjct: 183 DKAVGAERNVLIFDLGGGTFSVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEF 242
Query: 290 KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSK 349
KR D+S++K A++RL + E+AK LSS++Q I + + ++TR++
Sbjct: 243 KRAHAKDISENKRAVRRLATACERAKRTLSSSTQASIEIDSLYEGID----FYTSITRAR 298
Query: 350 FETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSPSK 408
FE L L T P + L+DA + + +++LVGG TR+PK+Q+++ + F GK +K
Sbjct: 299 FEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNK 358
Query: 409 GVNPDEAVALGAAIQGGIL 427
+NPDEAVA GAA+Q IL
Sbjct: 359 SINPDEAVAYGAAVQAAIL 377
>pdb|4FSV|A Chain A, Crystal Structure Of A Heat Shock 70kda Protein 2 (Hspa2)
From Homo Sapiens At 1.80 A Resolution
Length = 387
Score = 358 bits (920), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 189/384 (49%), Positives = 250/384 (65%), Gaps = 14/384 (3%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
IG+DLGTT SCV V + ++I N +G RTTPS VAF E L+G AK Q NP N
Sbjct: 8 IGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAXNPTN 66
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVN---APNGDAWVEANGQQYSPSQIGAFVLT 172
T+F KRLIGR+F DA Q + K PF++V+ P + + + P +I + VLT
Sbjct: 67 TIFDAKRLIGRKFEDATVQSDXKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEISSXVLT 126
Query: 173 KMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGM 232
K KE AE+YLG V AVITVPAYFND+QRQATKDAG I GL+V RIINEPTAAA++YG+
Sbjct: 127 KXKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAYGL 186
Query: 233 NNK-----EGLIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVS 287
+ K E + +FDLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFDN + L
Sbjct: 187 DKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRXVSHLAE 246
Query: 288 EFKRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTR 347
EFKR + D+ +K A++RLR + E+AK LSS++Q I + + ++TR
Sbjct: 247 EFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVD----FYTSITR 302
Query: 348 SKFETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSP 406
++FE L L T P + L+DA + + E++LVGG TR+PK+Q+++ + F GK
Sbjct: 303 ARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKEL 362
Query: 407 SKGVNPDEAVALGAAIQGGILRGD 430
+K +NPDEAVA GAA+Q IL GD
Sbjct: 363 NKSINPDEAVAYGAAVQAAILIGD 386
>pdb|1DKY|A Chain A, The Substrate Binding Domain Of Dnak In Complex With A
Substrate Peptide, Determined From Type 2 Native
Crystals
pdb|1DKY|B Chain B, The Substrate Binding Domain Of Dnak In Complex With A
Substrate Peptide, Determined From Type 2 Native
Crystals
pdb|1DKZ|A Chain A, The Substrate Binding Domain Of Dnak In Complex With A
Substrate Peptide, Determined From Type 1 Native
Crystals
Length = 219
Score = 239 bits (609), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 119/200 (59%), Positives = 155/200 (77%)
Query: 434 LLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMA 493
+LLLDVTPLSLGIET+GG+ T LI +NTTIPTK SQVFSTA DNQ+ V I VLQGER+ A
Sbjct: 1 VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVSIHVLQGERKRA 60
Query: 494 ADNKALGEFELMGIPPAPRGIPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLS 553
ADNK+LG+F L GI PAPRG+PQIEVTFDIDA+GI+ VSAKDK +GKEQ+ITI++S GL+
Sbjct: 61 ADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLN 120
Query: 554 ESEIEKMVKEAELHAQRDQERKTLIDIRNNADTTIYSIEKSLGEYREKIPGEVAKEIEDA 613
E EI+KMV++AE +A+ D++ + L+ RN D ++S K + E +K+P + IE A
Sbjct: 121 EDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIESA 180
Query: 614 VSDLRKAMAGEDIDGIKAKL 633
++ L A+ GED I+AK+
Sbjct: 181 LTALETALKGEDKAAIEAKM 200
>pdb|3DPO|A Chain A, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Short Pyrrhocoricin-Derived
Inhibitor Peptide
pdb|3DPO|B Chain B, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Short Pyrrhocoricin-Derived
Inhibitor Peptide
pdb|3DPP|A Chain A, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form A)
pdb|3DPP|B Chain B, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form A)
pdb|3DPQ|A Chain A, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form B)
pdb|3DPQ|B Chain B, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form B)
pdb|3DPQ|E Chain E, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form B)
pdb|3DPQ|F Chain F, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form B)
pdb|3QNJ|A Chain A, Crystal Structure Of The Substrate Binding Domain Of
E.Coli Dnak In Complex With The Antimicrobial Peptide
Oncocin
pdb|3QNJ|B Chain B, Crystal Structure Of The Substrate Binding Domain Of
E.Coli Dnak In Complex With The Antimicrobial Peptide
Oncocin
pdb|4E81|A Chain A, Crystal Structure Of The Substrate Binding Domain Of
E.Coli Dnak In Complex With A Short Apidaecin Peptide
pdb|4E81|B Chain B, Crystal Structure Of The Substrate Binding Domain Of
E.Coli Dnak In Complex With A Short Apidaecin Peptide
Length = 219
Score = 238 bits (608), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 119/200 (59%), Positives = 155/200 (77%)
Query: 434 LLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMA 493
+LLLDVTPLSLGIET+GG+ T LI +NTTIPTK SQVFSTA DNQ+ V I VLQGER+ A
Sbjct: 1 VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRA 60
Query: 494 ADNKALGEFELMGIPPAPRGIPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLS 553
ADNK+LG+F L GI PAPRG+PQIEVTFDIDA+GI+ VSAKDK +GKEQ+ITI++S GL+
Sbjct: 61 ADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLN 120
Query: 554 ESEIEKMVKEAELHAQRDQERKTLIDIRNNADTTIYSIEKSLGEYREKIPGEVAKEIEDA 613
E EI+KMV++AE +A+ D++ + L+ RN D ++S K + E +K+P + IE A
Sbjct: 121 EDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIESA 180
Query: 614 VSDLRKAMAGEDIDGIKAKL 633
++ L A+ GED I+AK+
Sbjct: 181 LTALETALKGEDKAAIEAKM 200
>pdb|1DKX|A Chain A, The Substrate Binding Domain Of Dnak In Complex With A
Substrate Peptide, Determined From Type 1
Selenomethionyl Crystals
Length = 219
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 119/200 (59%), Positives = 154/200 (77%)
Query: 434 LLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMA 493
+LLLDVTPLSLGIET+GG+ T LI +NTTIPTK SQVFSTA DNQ+ V I VLQGER+ A
Sbjct: 1 VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRA 60
Query: 494 ADNKALGEFELMGIPPAPRGIPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLS 553
ADNK+LG+F L GI PAPRG+PQIEVTFDIDA+GI+ VSAKDK +GKEQ+ITI++S GL+
Sbjct: 61 ADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLN 120
Query: 554 ESEIEKMVKEAELHAQRDQERKTLIDIRNNADTTIYSIEKSLGEYREKIPGEVAKEIEDA 613
E EI+KMV++AE +A+ D++ L+ RN D ++S K + E +K+P + IE A
Sbjct: 121 EDEIQKMVRDAEANAEADRKFDELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIESA 180
Query: 614 VSDLRKAMAGEDIDGIKAKL 633
++ L A+ GED I+AK+
Sbjct: 181 LTALETALKGEDKAAIEAKM 200
>pdb|3N8E|A Chain A, Substrate Binding Domain Of The Human Heat Shock 70kda
Prote (Mortalin)
pdb|3N8E|B Chain B, Substrate Binding Domain Of The Human Heat Shock 70kda
Prote (Mortalin)
Length = 182
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 114/159 (71%), Positives = 133/159 (83%)
Query: 437 LDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMAADN 496
+DVTPLSLGIETLGG+FT+LINRNTTIPTKKSQVFSTAAD QTQV IKV QGEREMA DN
Sbjct: 23 MDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDN 82
Query: 497 KALGEFELMGIPPAPRGIPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSESE 556
K LG+F L+GIPPAPRG+PQIEVTFDIDANGIV VSAKDK TG+EQQI I+SSGGLS+ +
Sbjct: 83 KLLGQFTLIGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSSGGLSKDD 142
Query: 557 IEKMVKEAELHAQRDQERKTLIDIRNNADTTIYSIEKSL 595
IE MVK AE +A+ D+ +K ++ N A+ I+ E +
Sbjct: 143 IENMVKNAEKYAEEDRRKKERVEAVNMAEGIIHDTETKM 181
>pdb|1BPR|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak,
Minimized Average Structure
pdb|2BPR|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak, 25
Structures
Length = 191
Score = 228 bits (582), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 112/181 (61%), Positives = 145/181 (80%)
Query: 425 GILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIK 484
G + G VK++LLLDVTPLSLGIET+GG+ T LI +NTTIPTK SQVFSTA DNQ+ V I
Sbjct: 10 GSIEGRVKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIH 69
Query: 485 VLQGEREMAADNKALGEFELMGIPPAPRGIPQIEVTFDIDANGIVTVSAKDKATGKEQQI 544
VLQGER+ AADNK+LG+F L GI PAPRG+PQIEVTFDIDA+GI+ VSAKDK +GKEQ+I
Sbjct: 70 VLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKI 129
Query: 545 TIRSSGGLSESEIEKMVKEAELHAQRDQERKTLIDIRNNADTTIYSIEKSLGEYREKIPG 604
TI++S GL+E EI+KMV++AE +A+ D++ + L+ RN D ++S K + E +K+P
Sbjct: 130 TIKASSGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPA 189
Query: 605 E 605
+
Sbjct: 190 D 190
>pdb|3DQG|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F,
Mitochondrial Precursor, From Caenorhabditis Elegans.
pdb|3DQG|B Chain B, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F,
Mitochondrial Precursor, From Caenorhabditis Elegans.
pdb|3DQG|C Chain C, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F,
Mitochondrial Precursor, From Caenorhabditis Elegans.
pdb|3DQG|D Chain D, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F,
Mitochondrial Precursor, From Caenorhabditis Elegans
Length = 151
Score = 228 bits (582), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 110/148 (74%), Positives = 127/148 (85%)
Query: 438 DVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMAADNK 497
DVTPLSLGIETLGGI T+LI RNTTIPTKKSQVFSTAAD QTQV IKV QGEREMA NK
Sbjct: 4 DVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNK 63
Query: 498 ALGEFELMGIPPAPRGIPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSESEI 557
LG+F L+GIPPAPRG+PQ+EVTFDIDANGIV VSA+D+ TGKEQQI I+SSGGLS+ +I
Sbjct: 64 LLGQFSLVGIPPAPRGVPQVEVTFDIDANGIVNVSARDRGTGKEQQIVIQSSGGLSKDQI 123
Query: 558 EKMVKEAELHAQRDQERKTLIDIRNNAD 585
E M+KEAE +A D +RK L+++ N A+
Sbjct: 124 ENMIKEAEKNAAEDAKRKELVEVINQAE 151
>pdb|3D2F|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70
pdb|3D2F|C Chain C, Crystal Structure Of A Complex Of Sse1p And Hsp70
Length = 675
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 178/636 (27%), Positives = 299/636 (47%), Gaps = 70/636 (11%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
G+DLG NS +AV + ++ N R+TPSVV F K L G K + +N N
Sbjct: 5 FGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYL-GETGKNKQTSNIKN 63
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVNAPNGD--AWVEANGQQ--YSPSQIGAFVL 171
T+ KR+IG ++ ++E K K+V + A V G++ +S +Q+ A +
Sbjct: 64 TVANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFI 123
Query: 172 TKMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYG 231
K+K+T + ++++ I VP ++ + QR DA RIAGL+ RI+N+ TAA +SYG
Sbjct: 124 DKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGVSYG 183
Query: 232 M--------NNKEGLIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLE 283
+ K ++A D+G ++ S++ G +V T D GG DFD A+ E
Sbjct: 184 IFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAITE 243
Query: 284 FLVSEFKRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNI 343
EFK +ID+ ++ A R+ +AEK K LS+ + N PF ++
Sbjct: 244 HFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANT----NAPFSVESVMNDVDVSS 299
Query: 344 TLTRSKFETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIFG 403
L+R + E LV L+ER P L A ++ ++VD V ++GG TR+P +++ ++E FG
Sbjct: 300 QLSREELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFG 359
Query: 404 KSPSKGVNPDEAVALGA----AIQGGILRGDVKELLLLDVTPLSLG-------------- 445
K S +N DEA+A GA AI LR V+ D+ P S+
Sbjct: 360 KPLSTTLNQDEAIAKGAAFICAIHSPTLR--VRPFKFEDIHPYSVSYSWDKQVEDEDHME 417
Query: 446 IETLGGIF--TRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMAADNKALGEFE 503
+ G F T+LI N ++ FS AA + E+ + +E
Sbjct: 418 VFPAGSSFPSTKLITLN------RTGDFSMAASYTDITQLPPNTPEQ--------IANWE 463
Query: 504 LMGI--PPAPRGIPQIEVTFDIDANGIVTV----------SAKDKATGKEQQITIRS-SG 550
+ G+ P +P +++ D +G+ T+ + D T K+ +TI + +
Sbjct: 464 ITGVQLPEGQDSVP-VKLKLRCDPSGLHTIEEAYTIEDIEAGSDTKTVKKDDLTIVAHTF 522
Query: 551 GLSESEIEKMV-KEAELHAQRDQERKTLIDIRNNADTTIYSIEKSLGEYREKIPGEVAK- 608
GL ++ +++ KE E+ AQ D+ D +N + IY++ L E + K
Sbjct: 523 GLDAKKLNELIEKENEMLAQ-DKLVAETEDRKNTLEEYIYTLRGKLEEEYAPFASDAEKT 581
Query: 609 EIEDAVSDLRKAMAGEDIDGIKAKLDAANKAVSKIG 644
+++ ++ + + E D IKAK A + ++ +G
Sbjct: 582 KLQGMLNKAEEWLYDEGFDSIKAKYIAKYEELASLG 617
>pdb|3D2E|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
pdb|3D2E|C Chain C, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
Length = 675
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 178/636 (27%), Positives = 296/636 (46%), Gaps = 70/636 (11%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
G+DLG NS +AV + ++ N R+TPSVV F K L G K + +N N
Sbjct: 5 FGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYL-GETGKNKQTSNIKN 63
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVNAPNGD--AWVEANGQQ--YSPSQIGAFVL 171
T+ KR+IG ++ ++E K K+V + A V G++ +S +Q+ A +
Sbjct: 64 TVANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAXFI 123
Query: 172 TKMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYG 231
K+K+T + ++++ I VP ++ + QR DA RIAGL+ RI+N+ TAA +SYG
Sbjct: 124 DKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGVSYG 183
Query: 232 M--------NNKEGLIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLE 283
+ K ++A D+G ++ S+ G +V T D GG DFD A+ E
Sbjct: 184 IFKTDLPEGEEKPRIVAFVDIGHSSYTCSIXAFKKGQLKVLGTACDKHFGGRDFDLAITE 243
Query: 284 FLVSEFKRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNI 343
EFK +ID+ ++ A R+ +AEK K LS+ + N PF ++
Sbjct: 244 HFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANT----NAPFSVESVXNDVDVSS 299
Query: 344 TLTRSKFETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIFG 403
L+R + E LV L+ER P L A ++ ++VD V ++GG TR+P +++ ++E FG
Sbjct: 300 QLSREELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFG 359
Query: 404 KSPSKGVNPDEAVALGA----AIQGGILRGDVKELLLLDVTPLSLGI--------ETLGG 451
K S +N DEA+A GA AI LR V+ D+ P S+ E
Sbjct: 360 KPLSTTLNQDEAIAKGAAFICAIHSPTLR--VRPFKFEDIHPYSVSYSWDKQVEDEDHXE 417
Query: 452 IF--------TRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMAADNKALGEFE 503
+F T+LI N ++ FS AA + E+ + +E
Sbjct: 418 VFPAGSSFPSTKLITLN------RTGDFSXAASYTDITQLPPNTPEQ--------IANWE 463
Query: 504 LMGI--PPAPRGIPQIEVTFDIDANGIVTV----------SAKDKATGKEQQITI-RSSG 550
+ G+ P +P +++ D +G+ T+ + D T K+ +TI +
Sbjct: 464 ITGVQLPEGQDSVP-VKLKLRCDPSGLHTIEEAYTIEDIEAGSDTKTVKKDDLTIVAHTF 522
Query: 551 GLSESEIEKMV-KEAELHAQRDQERKTLIDIRNNADTTIYSIEKSLGEYREKIPGEVAK- 608
GL ++ +++ KE E AQ D+ D +N + IY++ L E + K
Sbjct: 523 GLDAKKLNELIEKENEXLAQ-DKLVAETEDRKNTLEEYIYTLRGKLEEEYAPFASDAEKT 581
Query: 609 EIEDAVSDLRKAMAGEDIDGIKAKLDAANKAVSKIG 644
+++ ++ + + E D IKAK A + ++ +G
Sbjct: 582 KLQGXLNKAEEWLYDEGFDSIKAKYIAKYEELASLG 617
>pdb|3C7N|A Chain A, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex
Length = 668
Score = 206 bits (523), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 132/406 (32%), Positives = 208/406 (51%), Gaps = 23/406 (5%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
G+DLG NS +AV + ++ N R+TPSVV F K L G K + +N N
Sbjct: 7 FGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYL-GETGKNKQTSNIKN 65
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVNAPNGD--AWVEANGQQ--YSPSQIGAFVL 171
T+ KR+IG ++ ++E K K+V + A V G++ +S +Q+ A +
Sbjct: 66 TVANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFI 125
Query: 172 TKMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYG 231
K+K+T + ++++ I VP ++ + QR DA RIAGL+ RI+N+ TAA +SYG
Sbjct: 126 DKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGVSYG 185
Query: 232 M--------NNKEGLIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLE 283
+ K ++A D+G ++ S++ G +V T D GG DFD A+ E
Sbjct: 186 IFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAITE 245
Query: 284 FLVSEFKRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNI 343
EFK +ID+ ++ A R+ +AEK K LS+ + N PF ++
Sbjct: 246 HFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANT----NAPFSVESVMNDVDVSS 301
Query: 344 TLTRSKFETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIFG 403
L+R + E LV L+ER P L A ++ ++VD V ++GG TR+P +++ ++E FG
Sbjct: 302 QLSREELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFG 361
Query: 404 KSPSKGVNPDEAVALGA----AIQGGILRGDVKELLLLDVTPLSLG 445
K S +N DEA+A GA AI LR V+ D+ P S+
Sbjct: 362 KPLSTTLNQDEAIAKGAAFICAIHSPTLR--VRPFKFEDIHPYSVS 405
>pdb|2QXL|A Chain A, Crystal Structure Analysis Of Sse1, A Yeast Hsp110
pdb|2QXL|B Chain B, Crystal Structure Analysis Of Sse1, A Yeast Hsp110
Length = 658
Score = 205 bits (522), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 132/406 (32%), Positives = 208/406 (51%), Gaps = 23/406 (5%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPAN 115
G+DLG NS +AV + ++ N R+TPSVV F K L G K + +N N
Sbjct: 4 FGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYL-GETGKNKQTSNIKN 62
Query: 116 TLFGTKRLIGRRFNDAQTQKEMKMVPFKIVNAPNGD--AWVEANGQQ--YSPSQIGAFVL 171
T+ KR+IG ++ ++E K K+V + A V G++ +S +Q+ A +
Sbjct: 63 TVANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFI 122
Query: 172 TKMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYG 231
K+K+T + ++++ I VP ++ + QR DA RIAGL+ RI+N+ TAA +SYG
Sbjct: 123 DKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGVSYG 182
Query: 232 M--------NNKEGLIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLE 283
+ K ++A D+G ++ S++ G +V T D GG DFD A+ E
Sbjct: 183 IFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAITE 242
Query: 284 FLVSEFKRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNI 343
EFK +ID+ ++ A R+ +AEK K LS+ + N PF ++
Sbjct: 243 HFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANT----NAPFSVESVMNDVDVSS 298
Query: 344 TLTRSKFETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIFG 403
L+R + E LV L+ER P L A ++ ++VD V ++GG TR+P +++ ++E FG
Sbjct: 299 QLSREELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFG 358
Query: 404 KSPSKGVNPDEAVALGA----AIQGGILRGDVKELLLLDVTPLSLG 445
K S +N DEA+A GA AI LR V+ D+ P S+
Sbjct: 359 KPLSTTLNQDEAIAKGAAFICAIHSPTLR--VRPFKFEDIHPYSVS 402
>pdb|1CKR|A Chain A, High Resolution Solution Structure Of The Heat Shock
Cognate-70 Kd Substrate Binding Domain Obtained By
Multidimensional Nmr Techniques
pdb|7HSC|A Chain A, High Resolution Solution Structure Of The Heat Shock
Cognate-70 Kd Substrate Binding Domain Obtained By
Multidimensional Nmr Techniques
Length = 159
Score = 191 bits (486), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 95/155 (61%), Positives = 123/155 (79%), Gaps = 1/155 (0%)
Query: 430 DVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGE 489
+V++LLLLDVTPLSLGIET GG+ T LI RNTTIPTK++Q F+T +DNQ V I+V +GE
Sbjct: 3 NVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGE 62
Query: 490 REMAADNKALGEFELMGIPPAPRGIPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSS 549
R M DN LG+FEL GIPPAPRG+PQIEVTFDIDANGI+ VSA DK+TGKE +ITI +
Sbjct: 63 RAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITND 122
Query: 550 GG-LSESEIEKMVKEAELHAQRDQERKTLIDIRNN 583
G LS+ +IE+MV+EAE + D++++ + +N+
Sbjct: 123 KGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNS 157
>pdb|1Q5L|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak
Bound To The Peptide Nrllltg
Length = 135
Score = 178 bits (451), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 86/117 (73%), Positives = 102/117 (87%)
Query: 436 LLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMAAD 495
++DVTPLSLGIET+GG+ T LI +NTTIPTK SQVFSTA DNQ+ V I VLQGER+ AAD
Sbjct: 19 MVDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAAD 78
Query: 496 NKALGEFELMGIPPAPRGIPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGL 552
NK+LG+F L GI PAPRG+PQIEVTFDIDA+GI+ VSAKDK +GKEQ+ITI++S GL
Sbjct: 79 NKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGL 135
>pdb|3H0X|A Chain A, Crystal Structure Of Peptide-Binding Domain Of Kar2
Protein From Saccharomyces Cerevisiae
Length = 152
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/146 (61%), Positives = 108/146 (73%), Gaps = 1/146 (0%)
Query: 438 DVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMAADNK 497
DV L+LGIET GG+ T LI RNT IPTKKSQ+FSTA DNQ V IKV +GER M+ DN
Sbjct: 4 DVNALTLGIETTGGVMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGERAMSKDNN 63
Query: 498 ALGEFELMGIPPAPRGIPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGG-LSESE 556
LG+FEL GIPPAPRG+PQIEVTF +DANGI+ VSA DK TGK + ITI + G L++ E
Sbjct: 64 LLGKFELTGIPPAPRGVPQIEVTFALDANGILKVSATDKGTGKSESITITNDKGRLTQEE 123
Query: 557 IEKMVKEAELHAQRDQERKTLIDIRN 582
I++MV+EAE A D K ++ RN
Sbjct: 124 IDRMVEEAEKFASEDASIKAKVESRN 149
>pdb|1DG4|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak In
The Apo Form
Length = 115
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 86/115 (74%), Positives = 100/115 (86%)
Query: 438 DVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMAADNK 497
DVTPLSLGIET+GG+ T LI +NTTIPTK SQVFSTA DNQ+ V I VLQGER+ AADNK
Sbjct: 1 DVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNK 60
Query: 498 ALGEFELMGIPPAPRGIPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGL 552
+LG+F L GI PAPRG+PQIEVTFDIDA+GI+ VSAKDK +GKEQ+ITI++S GL
Sbjct: 61 SLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGL 115
>pdb|3DOB|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein
F44e5.5 From C.Elegans.
pdb|3DOB|B Chain B, Peptide-Binding Domain Of Heat Shock 70 Kda Protein
F44e5.5 From C.Elegans
Length = 152
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/146 (58%), Positives = 110/146 (75%), Gaps = 1/146 (0%)
Query: 438 DVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMAADNK 497
DV PLSLGIET GG+ T LI+RNT IPTK + F+T ADNQ V I+V +GER M DN
Sbjct: 4 DVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNH 63
Query: 498 ALGEFELMGIPPAPRGIPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGG-LSESE 556
LG FEL GIPPAPRG+PQIEVTF+IDANGI+ VSA+DK+TGK +ITI++ G L++S+
Sbjct: 64 RLGTFELSGIPPAPRGVPQIEVTFNIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSD 123
Query: 557 IEKMVKEAELHAQRDQERKTLIDIRN 582
I++MV EA+ + D E++ + RN
Sbjct: 124 IDRMVHEAKQFEKEDGEQRERVQARN 149
>pdb|2OP6|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein D
Precursor From C.Elegans
Length = 152
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 84/146 (57%), Positives = 110/146 (75%), Gaps = 1/146 (0%)
Query: 438 DVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMAADNK 497
DV PL+LGIET+GG+ T+LI RNT IPTKKSQVFSTAAD+Q+ V I + +GER M DN
Sbjct: 4 DVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNH 63
Query: 498 ALGEFELMGIPPAPRGIPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGG-LSESE 556
LG F++ GIPPAPRG+PQIEVTF+ID NGI+ VSA+DK TG + ++TI + LS +
Sbjct: 64 KLGNFDVTGIPPAPRGVPQIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPED 123
Query: 557 IEKMVKEAELHAQRDQERKTLIDIRN 582
IE+M+ +A+ A DQ +K ++ RN
Sbjct: 124 IERMINDADKFAADDQAQKEKVESRN 149
>pdb|1XQS|C Chain C, Crystal Structure Of The Hspbp1 Core Domain Complexed With
The Fragment Of Hsp70 Atpase Domain
pdb|1XQS|D Chain D, Crystal Structure Of The Hspbp1 Core Domain Complexed With
The Fragment Of Hsp70 Atpase Domain
Length = 191
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 87/182 (47%), Positives = 123/182 (67%), Gaps = 9/182 (4%)
Query: 239 IAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEFKRTERIDLS 298
+ +FDLGGGTFDVS+L I +G+FEVKAT GDT LGGEDFDN L+ V EFKR + D+S
Sbjct: 15 VLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDIS 74
Query: 299 QDKLALQRLRESAEKAKIELSSTSQT--EINLPFITADASGAKHLNITLTRSKFETLVNH 356
Q+K A++RLR + E+AK LSS++Q EI+ F D ++TR++FE L +
Sbjct: 75 QNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGID------FYTSITRARFEELCSD 128
Query: 357 LIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSPSKGVNPDEA 415
L T P + L+DA + + +++LVGG TR+PKVQ+++ + F G+ +K +NPDEA
Sbjct: 129 LFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEA 188
Query: 416 VA 417
VA
Sbjct: 189 VA 190
>pdb|1U00|A Chain A, Hsca Substrate Binding Domain Complexed With The Iscu
Recognition Peptide Elppvkihc
Length = 227
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 126/202 (62%)
Query: 437 LDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMAADN 496
+DV PLSLG+ET+GG+ ++I RNTTIP ++Q F+T D QT + I V+QGERE+ D
Sbjct: 1 MDVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDC 60
Query: 497 KALGEFELMGIPPAPRGIPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSESE 556
++L F L GIP P G I VTF +DA+G+++V+A +K+TG E I ++ S GL++SE
Sbjct: 61 RSLARFALRGIPALPAGGAHIRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYGLTDSE 120
Query: 557 IEKMVKEAELHAQRDQERKTLIDIRNNADTTIYSIEKSLGEYREKIPGEVAKEIEDAVSD 616
I M+K++ +A++D + + L + + A + S+ +L + + I+DA +
Sbjct: 121 IASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGALAADAALLSAAERQVIDDAAAH 180
Query: 617 LRKAMAGEDIDGIKAKLDAANK 638
L + G+D+D I+ + +K
Sbjct: 181 LSEVAQGDDVDAIEQAIKNVDK 202
>pdb|4GNI|A Chain A, Structure Of The Ssz1 Atpase Bound To Atp And Magnesium
pdb|4GNI|B Chain B, Structure Of The Ssz1 Atpase Bound To Atp And Magnesium
Length = 409
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/404 (29%), Positives = 187/404 (46%), Gaps = 32/404 (7%)
Query: 48 ARPAGNDVIGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKR 107
A P VIG+ G +NS +A +VI N +G R P+++++ G+ G AK
Sbjct: 8 AAPGERVVIGITFGNSNSSIAHTVDDKAEVIANEDGDRQIPTILSY-VDGDEYYGQQAKN 66
Query: 108 QAVTNPANTLFGTKRLIGRRFND---------AQTQKEMKMVPFKIVNAPNGDAWVEANG 158
V NP NT+ + ++G+ F A Q+ V F I + DA
Sbjct: 67 FLVRNPKNTVAYFRDILGQDFKSVDPTHNHASAHPQEAGDNVVFTIKDKAEEDA----EP 122
Query: 159 QQYSPSQIGAFVLTKMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQR 218
+ S+I L ++ A YLGK V+ AVIT+P F + Q+ A A A L+V +
Sbjct: 123 STLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNFTEKQKAALIAAAAAADLEVLQ 182
Query: 219 IINEPTAAALSYGMNNK----EGLIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGG 274
+I+EP AA L+Y + + +I V DLGG DV+VL +G++ + AT D G
Sbjct: 183 LISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHG 242
Query: 275 EDFDNALLEFLVSEF--KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFIT 332
D L++ EF K D ++ +L +LR AE K LS ++ N F
Sbjct: 243 IALDKVLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRST----NASFSV 298
Query: 333 ADASGAKHLNITLTRSKFETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVP 392
T+ R ++ET+ + E ++ +K A + DVDEV++ GG + P
Sbjct: 299 ESLIDGLDFASTINRLRYETIARTVFEGFNRLVESAVKKAGLDPLDVDEVIMSGGTSNTP 358
Query: 393 KVQEIVTEIFGKS-----PS---KGVNPDEAVALGAAIQGGILR 428
++ IF +S PS +NP E A GAA+Q +++
Sbjct: 359 RIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQASLIQ 402
>pdb|1JCF|A Chain A, Mreb From Thermotoga Maritima, Trigonal
pdb|1JCG|A Chain A, Mreb From Thermotoga Maritima, Amppnp
pdb|2WUS|A Chain A, Bacterial Actin Mreb Assembles In Complex With Cell Shape
Protein Rodz
pdb|2WUS|B Chain B, Bacterial Actin Mreb Assembles In Complex With Cell Shape
Protein Rodz
Length = 344
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 157/381 (41%), Gaps = 79/381 (20%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQK-GELL-VGTPAKRQAVTNP 113
IG+DLGT N+ V + GK V E PSV+A + GE+L VG AK P
Sbjct: 6 IGIDLGTANTLV-FLRGKGIVVNE--------PSVIAIDSTTGEILKVGLEAKNMIGKTP 56
Query: 114 ANTLFGTKRLIGRRFNDAQTQKEMKMVPFKIVNAPNGDAWVEANGQQYSPSQIGAFVLTK 173
A T K ++ P D + Y+ + +L
Sbjct: 57 A------------------TIKAIR---------PMRDGVI----ADYT---VALVMLRY 82
Query: 174 MKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGMN 233
A+ + VI VP D +R+A DAG AG +I EP AAA+ +N
Sbjct: 83 FINKAKGGMNLFKPRVVIGVPIGITDVERRAILDAGLEAGASKVFLIEEPMAAAIGSNLN 142
Query: 234 NKE--GLIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEFKR 291
+E G + V D+GGGT +V+V+ + + V T + G++ D A+++++ +
Sbjct: 143 VEEPSGNMVV-DIGGGTTEVAVISLGSIV-----TWESIRIAGDEMDEAIVQYV----RE 192
Query: 292 TERIDLSQDKLALQRLRESAEKAKIELS----STSQTEINLPFITADASGAKHLNITL-- 345
T R+ + + +AE+ KIE+ S E+ D S +TL
Sbjct: 193 TYRVAIGE---------RTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKG 243
Query: 346 --TRSKFETLVNHLIERTKAPCKNCLKDANITIKDVDE--VLLVGGMTRVPKVQEIVTEI 401
R ++V ++E + + + + D+ E + L GG + + + ++ +
Sbjct: 244 GEVREALRSVVVAIVESVRTTLEKTPPE---LVSDIIERGIFLTGGGSLLRGLDTLLQKE 300
Query: 402 FGKSPSKGVNPDEAVALGAAI 422
G S + P AVA GA +
Sbjct: 301 TGISVIRSEEPLTAVAKGAGM 321
>pdb|1JCE|A Chain A, Mreb From Thermotoga Maritima
Length = 344
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 156/380 (41%), Gaps = 79/380 (20%)
Query: 56 IGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQK-GELL-VGTPAKRQAVTNP 113
IG+DLGT N+ V + GK V E PSV+A + GE+L VG AK P
Sbjct: 6 IGIDLGTANTLV-FLRGKGIVVNE--------PSVIAIDSTTGEILKVGLEAKNXIGKTP 56
Query: 114 ANTLFGTKRLIGRRFNDAQTQKEMKMVPFKIVNAPNGDAWVEANGQQYSPSQIGA-FVLT 172
A T K ++ P D + Y+ + + + +
Sbjct: 57 A------------------TIKAIR---------PXRDGVI----ADYTVALVXLRYFIN 85
Query: 173 KMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGM 232
K K + + VI VP D +R+A DAG AG +I EP AAA+ +
Sbjct: 86 KAKGGXNLFKPR----VVIGVPIGITDVERRAILDAGLEAGASKVFLIEEPXAAAIGSNL 141
Query: 233 NNKE-GLIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEFKR 291
N +E V D+GGGT +V+V+ + + V T + G++ D A+++++ +
Sbjct: 142 NVEEPSGNXVVDIGGGTTEVAVISLGSIV-----TWESIRIAGDEXDEAIVQYV----RE 192
Query: 292 TERIDLSQDKLALQRLRESAEKAKIELS----STSQTEINLPFITADASGAKHLNITL-- 345
T R+ + + +AE+ KIE+ S E+ D S +TL
Sbjct: 193 TYRVAIGE---------RTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKG 243
Query: 346 --TRSKFETLVNHLIERTKAPCKNCLKDANITIKDVDE--VLLVGGMTRVPKVQEIVTEI 401
R ++V ++E + + + + D+ E + L GG + + + ++ +
Sbjct: 244 GEVREALRSVVVAIVESVRTTLEKTPPE---LVSDIIERGIFLTGGGSLLRGLDTLLQKE 300
Query: 402 FGKSPSKGVNPDEAVALGAA 421
G S + P AVA GA
Sbjct: 301 TGISVIRSEEPLTAVAKGAG 320
>pdb|3H1Q|A Chain A, Crystal Structure Of Ethanolamine Utilization Protein Eutj
From Carboxydothermus Hydrogenoformans
pdb|3H1Q|B Chain B, Crystal Structure Of Ethanolamine Utilization Protein Eutj
From Carboxydothermus Hydrogenoformans
Length = 272
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 166 IGAF-VLTKMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPT 224
IGA ++ ++K E LG + +A +P +A AGL++ +++EP
Sbjct: 71 IGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPV 130
Query: 225 AAALSYGMNNKEGLIAVFDLGGGTFDVSVLE 255
AAA + G+N+ V D+GGGT ++V+E
Sbjct: 131 AAARALGINDG----IVVDIGGGTTGIAVIE 157
>pdb|3I8B|A Chain A, The Crystal Structure Of Xylulose Kinase From
Bifidobacterium Adolescentis
Length = 515
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 7/107 (6%)
Query: 327 NLPFITADASGAKHLNITLTRSKFETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVG 386
N P TA SG TL + E L +E ++CL+ + +LL+G
Sbjct: 378 NRPNATATFSGX-----TLANTTRENLARAFVEGLLCSQRDCLELIRSLGASITRILLIG 432
Query: 387 GMTRVPKVQEIVTEIFGKSPSKGVNPDEAVALGAAIQGG-ILRGDVK 432
G + ++ + I G ++ DE VA+GAA Q +L G+ +
Sbjct: 433 GGAKSEAIRTLAPSILGXDVTRPAT-DEYVAIGAARQAAWVLSGETE 478
>pdb|3U3I|A Chain A, A Rna Binding Protein From Crimean-Congo Hemorrhagic Fever
Virus
Length = 482
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 556 EIEKMVKEAELHAQRDQERKTLIDIRNNADTTIYSIEKSLGEYREKIPGEVAKEIEDAVS 615
E+ K+ + A+ + RK I R NA+TT S K L EY K+PGE+ +++ +S
Sbjct: 116 EVPKIEQLADYQQAALKWRKD-IGFRVNANTTALS-HKVLAEY--KVPGEIVMSVKEMLS 171
Query: 616 DL 617
D+
Sbjct: 172 DM 173
>pdb|1S5J|A Chain A, Insight In Dna Replication: The Crystal Structure Of Dna
Polymerase B1 From The Archaeon Sulfolobus Solfataricus
Length = 847
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 75/174 (43%), Gaps = 23/174 (13%)
Query: 287 SEFKRTERIDLSQDKLALQRLRESAEKA---KIELSSTSQTEINL----PFITADASGAK 339
++FK T+ + +D LA++RLR KA I+ + +I L P++ +
Sbjct: 91 NKFKLTKIV--VRDPLAVRRLRNDVPKAYEAHIKYFNNYMYDIGLIPGMPYVVKNG---- 144
Query: 340 HLNITLTRSKFETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVT 399
K E++ L E+ K D++ + + L T +PK++ +
Sbjct: 145 ---------KLESVYLSLDEKDVEEIKKAFADSDEMTRQMAVDWLPIFETEIPKIKRVAI 195
Query: 400 EIFGKSPSKGVNPDEAVALGAAIQGGILRGD-VKELLLLDVTPLSLGIETLGGI 452
+I +P KG PD A I + D +K++L+L+ ++ G L GI
Sbjct: 196 DIEVYTPVKGRIPDSQKAEFPIISIALAGSDGLKKVLVLNRNDVNEGSVKLDGI 249
>pdb|1E4G|T Chain T, Ftsa (Atp-Bound Form) From Thermotoga Maritima
Length = 419
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
Query: 344 TLTRSKFETLVNHLIERTKAPCKNCLKDANITIKDVDE------VLLVGGMTRVPKVQEI 397
T T K +++ + + K ++ I + E V+L GG ++P++ E+
Sbjct: 288 TTTAKKLSVIIHARLREIXSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINEL 347
Query: 398 VTEIFGKSPSK 408
TE+F KSP +
Sbjct: 348 ATEVF-KSPVR 357
>pdb|3EQE|A Chain A, Crystal Structure Of The Yubc Protein From Bacillus
Subtilis. Northeast Structural Genomics Consortium
Target Sr112.
pdb|3EQE|B Chain B, Crystal Structure Of The Yubc Protein From Bacillus
Subtilis. Northeast Structural Genomics Consortium
Target Sr112
Length = 171
Score = 29.3 bits (64), Expect = 6.7, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 26/66 (39%)
Query: 50 PAGNDVIGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQA 109
P + D G + C V+EGK I S G S F +GE L+ T
Sbjct: 77 PPNKETTVHDHGQSIGCAXVLEGKLLNSIYRSTGEHAELSNSYFVHEGECLISTKGLIHK 136
Query: 110 VTNPAN 115
+NP +
Sbjct: 137 XSNPTS 142
>pdb|1E4F|T Chain T, Ftsa (Apo Form) From Thermotoga Maritima
pdb|4A2A|A Chain A, Thermotoga Maritima Ftsa:ftsz(336-351)
pdb|4A2A|B Chain B, Thermotoga Maritima Ftsa:ftsz(336-351)
pdb|4A2B|A Chain A, Thermotoga Maritima Ftsa With Atp Gamma S
Length = 419
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Query: 382 VLLVGGMTRVPKVQEIVTEIFGKSPSK 408
V+L GG ++P++ E+ TE+F KSP +
Sbjct: 332 VVLTGGGAKIPRINELATEVF-KSPVR 357
>pdb|2ZJ2|A Chain A, Archaeal Dna Helicase Hjm Apo State In Form 1
pdb|2ZJ5|A Chain A, Archaeal Dna Helicase Hjm Complexed With Adp In Form 1
pdb|2ZJ8|A Chain A, Archaeal Dna Helicase Hjm Apo State In Form 2
pdb|2ZJA|A Chain A, Archaeal Dna Helicase Hjm Complexed With Amppcp In Form 2
Length = 720
Score = 29.3 bits (64), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 18/118 (15%)
Query: 302 LALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKFETLVNHLIERT 361
LA ++ +E + KI L T + + D K+ I T KF++L+ H
Sbjct: 80 LAEEKFQEFQDWEKIGLRVAMATG---DYDSKDEWLGKYDIIIATAEKFDSLLRH----- 131
Query: 362 KAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIFGKSPSKGV-----NPDE 414
+ +KD I + DE+ L+G R ++ I+ + GK+ G+ NP+E
Sbjct: 132 ---GSSWIKDVKILV--ADEIHLIGSRDRGATLEVILAHMLGKAQIIGLSATIGNPEE 184
>pdb|4IFQ|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Nup192,
Residues 2 To 960 [scnup192(2-960)]
Length = 970
Score = 28.9 bits (63), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 293 ERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNI 343
+ ++L+ DKL R EK +IELS S ++N FI S + LN+
Sbjct: 35 QNLNLNTDKLKNNASRSQLEKGEIELSDGSTFKVNQEFIFEAISLSDELNL 85
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.313 0.131 0.357
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,239,081
Number of Sequences: 62578
Number of extensions: 753065
Number of successful extensions: 2134
Number of sequences better than 100.0: 103
Number of HSP's better than 100.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1759
Number of HSP's gapped (non-prelim): 108
length of query: 676
length of database: 14,973,337
effective HSP length: 105
effective length of query: 571
effective length of database: 8,402,647
effective search space: 4797911437
effective search space used: 4797911437
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)