Query 005807
Match_columns 676
No_of_seqs 441 out of 2782
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 07:56:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005807.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005807hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9q_A Chaperone protein DNAK; 100.0 9E-111 3E-115 951.8 73.9 597 53-649 2-604 (605)
2 2kho_A Heat shock protein 70; 100.0 6E-108 2E-112 928.4 63.4 597 53-649 2-604 (605)
3 3d2f_A Heat shock protein homo 100.0 6E-103 2E-107 892.9 65.2 589 53-649 2-626 (675)
4 1yuw_A Heat shock cognate 71 k 100.0 4E-97 1E-101 832.2 47.8 538 52-595 3-553 (554)
5 2v7y_A Chaperone protein DNAK; 100.0 7.8E-91 2.7E-95 775.3 53.8 507 53-585 2-509 (509)
6 3i33_A Heat shock-related 70 k 100.0 1.6E-63 5.5E-68 541.9 44.5 372 52-429 22-403 (404)
7 1dkg_D Molecular chaperone DNA 100.0 2.8E-63 9.7E-68 536.1 41.5 376 53-428 2-383 (383)
8 3qfu_A 78 kDa glucose-regulate 100.0 4.7E-62 1.6E-66 528.7 44.1 371 52-428 17-394 (394)
9 4gni_A Putative heat shock pro 100.0 1.1E-61 3.7E-66 528.1 39.9 369 53-429 13-403 (409)
10 4e81_A Chaperone protein DNAK; 100.0 6.6E-43 2.3E-47 341.4 27.4 215 435-649 2-216 (219)
11 1jce_A ROD shape-determining p 100.0 1.3E-41 4.3E-46 361.4 23.4 313 53-428 3-327 (344)
12 1u00_A HSC66, chaperone protei 100.0 2.5E-39 8.4E-44 319.6 29.1 215 437-651 1-215 (227)
13 3n8e_A Stress-70 protein, mito 100.0 8.4E-35 2.9E-39 274.4 16.5 164 432-595 18-181 (182)
14 3h0x_A 78 kDa glucose-regulate 100.0 2.7E-32 9.2E-37 251.0 15.2 150 436-585 2-152 (152)
15 3dob_A Heat shock 70 kDa prote 100.0 1.6E-32 5.6E-37 251.9 13.1 150 436-585 2-152 (152)
16 3dqg_A Heat shock 70 kDa prote 100.0 9.9E-33 3.4E-37 253.1 9.6 150 436-585 2-151 (151)
17 2op6_A Heat shock 70 kDa prote 100.0 9.3E-30 3.2E-34 235.7 13.9 150 436-585 2-152 (152)
18 2fsj_A Hypothetical protein TA 100.0 8.4E-29 2.9E-33 261.7 12.4 224 160-425 94-343 (346)
19 2ych_A Competence protein PILM 99.9 1.8E-28 6.3E-33 263.4 11.6 316 52-425 12-373 (377)
20 3h1q_A Ethanolamine utilizatio 99.9 3E-26 1E-30 234.7 25.5 203 164-424 70-272 (272)
21 1k8k_A ARP3, actin-like protei 99.9 3.7E-26 1.3E-30 248.7 17.1 308 52-426 4-387 (418)
22 2fxu_A Alpha-actin-1, actin, a 99.9 5.6E-26 1.9E-30 243.4 16.7 298 54-426 6-349 (375)
23 4a2a_A Cell division protein F 99.9 1.9E-25 6.4E-30 241.1 19.4 197 200-426 168-393 (419)
24 1q5l_A Chaperone protein DNAK; 99.9 1.5E-24 5.2E-29 195.1 11.8 121 432-552 15-135 (135)
25 2zgy_A Plasmid segregation pro 99.9 1.8E-23 6.1E-28 219.0 8.1 225 160-424 73-319 (320)
26 1k8k_B ARP2, actin-like protei 99.8 1.6E-20 5.5E-25 202.0 4.8 214 187-426 105-364 (394)
27 4ehu_A Activator of 2-hydroxyi 99.8 1.6E-19 5.3E-24 185.0 11.0 186 211-427 68-255 (276)
28 3js6_A Uncharacterized PARM pr 99.7 2.5E-17 8.7E-22 173.8 13.6 203 188-429 115-339 (355)
29 4apw_A ALP12; actin-like prote 99.6 7E-16 2.4E-20 161.4 7.2 202 187-426 106-324 (329)
30 3qb0_A Actin-related protein 4 99.6 2.3E-14 8E-19 156.1 18.3 180 53-287 23-209 (498)
31 3dwl_A Actin-related protein 3 99.5 3.4E-15 1.2E-19 161.1 5.9 242 165-426 103-396 (427)
32 3lof_A Heat shock 70 kDa prote 99.5 3.3E-14 1.1E-18 124.1 10.4 103 573-675 3-113 (113)
33 2p32_A Heat shock 70 kDa prote 99.5 2.9E-14 9.9E-19 125.6 6.8 102 574-675 13-120 (120)
34 1ud0_A HSC70, 70 kDa heat-shoc 99.3 1.3E-12 4.4E-17 114.1 7.7 99 577-675 2-113 (113)
35 2d0o_A DIOL dehydratase-reacti 99.3 2.2E-12 7.4E-17 137.1 5.0 196 200-425 368-603 (610)
36 1nbw_A Glycerol dehydratase re 99.2 3.6E-12 1.2E-16 136.0 5.1 194 202-425 372-605 (607)
37 4fo0_A Actin-related protein 8 99.2 7.4E-11 2.5E-15 133.8 15.9 111 171-288 177-294 (593)
38 1hux_A Activator of (R)-2-hydr 98.8 1.4E-07 4.9E-12 95.3 18.7 73 351-427 185-257 (270)
39 3ll3_A Gluconate kinase; xylul 98.6 5.1E-07 1.8E-11 99.7 15.8 202 206-430 219-444 (504)
40 3hz6_A Xylulokinase; xylulose, 98.4 8.3E-07 2.8E-11 98.2 12.4 206 206-431 223-455 (511)
41 3ezw_A Glycerol kinase; glycer 98.4 1.1E-06 3.7E-11 97.7 11.6 84 345-432 371-455 (526)
42 3ifr_A Carbohydrate kinase, FG 98.3 1.1E-06 3.8E-11 97.1 9.2 200 206-430 225-451 (508)
43 4e1j_A Glycerol kinase; struct 98.3 7.3E-06 2.5E-10 90.8 14.6 195 211-431 255-477 (520)
44 3i8b_A Xylulose kinase; strain 98.2 3E-06 1E-10 93.7 10.2 77 346-429 395-474 (515)
45 3h3n_X Glycerol kinase; ATP-bi 98.2 2.8E-05 9.4E-10 85.9 17.4 192 212-431 236-455 (506)
46 4am6_A Actin-like protein ARP8 98.0 2.7E-05 9.2E-10 85.9 13.1 128 187-325 222-350 (655)
47 2ews_A Pantothenate kinase; PA 97.7 0.00044 1.5E-08 69.6 13.4 74 346-424 208-286 (287)
48 2i7n_A Pantothenate kinase 1; 97.4 0.0011 3.8E-08 68.5 12.4 69 351-424 279-358 (360)
49 3eno_A Putative O-sialoglycopr 96.7 0.53 1.8E-05 48.4 25.5 68 357-429 233-306 (334)
50 3l0q_A Xylulose kinase; xlylul 96.7 0.0022 7.4E-08 71.5 7.7 88 342-430 406-493 (554)
51 2itm_A Xylulose kinase, xylulo 96.6 0.0022 7.5E-08 70.2 6.7 82 346-430 357-438 (484)
52 2ivn_A O-sialoglycoprotein end 96.6 0.81 2.8E-05 46.9 28.2 62 359-425 230-297 (330)
53 2zf5_O Glycerol kinase; hypert 96.6 0.0032 1.1E-07 69.1 7.7 77 352-430 368-444 (497)
54 1t6c_A Exopolyphosphatase; alp 96.5 0.0071 2.4E-07 61.9 9.3 75 202-281 100-177 (315)
55 4bc3_A Xylulose kinase; transf 96.5 0.0044 1.5E-07 68.7 8.1 77 351-428 407-483 (538)
56 3vov_A Glucokinase, hexokinase 96.4 0.56 1.9E-05 47.4 22.9 42 211-254 97-141 (302)
57 3vgl_A Glucokinase; ROK family 96.3 0.18 6.3E-06 51.5 19.0 41 212-254 96-139 (321)
58 3g25_A Glycerol kinase; IDP007 96.3 0.0035 1.2E-07 68.9 6.1 53 378-431 404-456 (501)
59 4db3_A Glcnac kinase, N-acetyl 96.2 1.1 3.7E-05 45.8 23.7 47 379-425 270-325 (327)
60 2p3r_A Glycerol kinase; glycer 96.2 0.0039 1.3E-07 68.6 5.3 53 378-431 401-453 (510)
61 3jvp_A Ribulokinase; PSI-II, N 96.1 0.0047 1.6E-07 69.0 5.8 80 346-429 410-490 (572)
62 3r8e_A Hypothetical sugar kina 96.0 1.1 3.9E-05 45.5 22.8 47 379-425 261-318 (321)
63 2dpn_A Glycerol kinase; thermu 95.9 0.012 4.1E-07 64.5 7.6 80 346-429 368-448 (495)
64 4htl_A Beta-glucoside kinase; 95.8 0.93 3.2E-05 45.6 21.0 48 379-426 238-291 (297)
65 2qm1_A Glucokinase; alpha-beta 95.8 0.45 1.5E-05 48.5 18.6 48 379-426 263-321 (326)
66 2d4w_A Glycerol kinase; alpha 95.7 0.0089 3.1E-07 65.7 5.8 51 378-429 403-453 (504)
67 2w40_A Glycerol kinase, putati 95.7 0.0088 3E-07 65.7 5.6 52 378-430 406-458 (503)
68 2ch5_A NAGK protein; transfera 95.5 2.6 9E-05 43.1 27.8 61 185-249 70-133 (347)
69 2uyt_A Rhamnulokinase; rhamnos 95.2 0.016 5.6E-07 63.3 5.5 47 378-426 393-439 (489)
70 3mdq_A Exopolyphosphatase; str 95.0 1.7 5.8E-05 44.1 19.8 75 202-281 92-170 (315)
71 1z6r_A MLC protein; transcript 94.0 3 0.0001 43.9 19.6 41 212-254 186-229 (406)
72 2ap1_A Putative regulator prot 93.9 4.5 0.00015 41.0 20.3 41 212-254 120-163 (327)
73 3h6e_A Carbohydrate kinase, FG 93.9 0.064 2.2E-06 58.3 6.3 72 351-427 362-436 (482)
74 3zyy_X Iron-sulfur cluster bin 93.9 0.57 2E-05 51.9 13.8 57 342-399 499-555 (631)
75 2e2o_A Hexokinase; acetate and 93.3 7.1 0.00024 38.9 28.1 48 378-426 239-287 (299)
76 1z05_A Transcriptional regulat 92.4 6.1 0.00021 41.8 19.0 41 212-254 208-251 (429)
77 3bex_A Type III pantothenate k 90.7 2.3 7.8E-05 41.5 12.3 20 54-73 4-23 (249)
78 2yhx_A Hexokinase B; transfera 89.9 1.3 4.4E-05 47.5 10.5 56 200-256 164-221 (457)
79 3en9_A Glycoprotease, O-sialog 89.9 10 0.00035 41.4 18.1 183 185-402 72-272 (540)
80 3cer_A Possible exopolyphospha 88.3 0.82 2.8E-05 47.1 7.2 77 202-281 105-191 (343)
81 3o8m_A Hexokinase; rnaseh-like 85.1 2.4 8.4E-05 45.5 9.0 57 199-256 185-243 (485)
82 1u6z_A Exopolyphosphatase; alp 84.4 1.3 4.6E-05 48.2 6.8 74 203-281 100-176 (513)
83 3hi0_A Putative exopolyphospha 84.0 2.1 7.3E-05 46.5 8.1 74 202-280 103-178 (508)
84 3ven_A O-carbamoyltransferase 79.4 31 0.0011 37.7 15.1 79 347-430 280-361 (576)
85 1bdg_A Hexokinase; phosphotran 79.3 6.3 0.00022 42.0 9.5 57 198-255 171-229 (451)
86 3l0q_A Xylulose kinase; xlylul 78.6 1.4 4.9E-05 48.6 4.4 23 51-73 3-25 (554)
87 4g9i_A Hydrogenase maturation 74.7 5.2 0.00018 45.7 7.7 61 361-426 693-759 (772)
88 3qbx_A Anhydro-N-acetylmuramic 74.5 7.2 0.00025 40.1 7.9 72 352-426 260-336 (371)
89 3ttc_A HYPF, transcriptional r 73.6 5.9 0.0002 44.2 7.5 64 358-426 584-651 (657)
90 3jvp_A Ribulokinase; PSI-II, N 73.4 2.3 7.8E-05 47.1 4.2 21 52-72 4-24 (572)
91 1sz2_A Glucokinase, glucose ki 73.3 79 0.0027 31.7 24.6 44 210-254 99-155 (332)
92 4bc3_A Xylulose kinase; transf 72.1 2.7 9.2E-05 46.2 4.4 23 51-73 8-30 (538)
93 1iv0_A Hypothetical protein; r 72.0 2.9 0.0001 34.3 3.5 19 54-72 2-20 (98)
94 3vth_A Hydrogenase maturation 71.0 6.6 0.00023 44.7 7.3 63 360-427 680-748 (761)
95 3h6e_A Carbohydrate kinase, FG 68.5 2.9 9.9E-05 45.2 3.6 22 52-73 5-26 (482)
96 2p3r_A Glycerol kinase; glycer 67.9 3.4 0.00012 45.0 4.0 22 52-73 2-23 (510)
97 1cza_N Hexokinase type I; stru 66.6 14 0.0005 43.1 9.2 55 199-254 183-240 (917)
98 2uyt_A Rhamnulokinase; rhamnos 66.6 3.1 0.00011 45.0 3.3 21 52-72 3-23 (489)
99 1cza_N Hexokinase type I; stru 66.0 16 0.00054 42.8 9.3 57 198-255 630-689 (917)
100 2dpn_A Glycerol kinase; thermu 65.1 4.1 0.00014 44.1 3.9 21 53-73 2-22 (495)
101 2w40_A Glycerol kinase, putati 64.5 4.3 0.00015 44.0 4.0 21 53-73 4-24 (503)
102 1nbw_A Glycerol dehydratase re 64.4 50 0.0017 35.8 11.8 47 187-233 131-178 (607)
103 1nu0_A Hypothetical protein YQ 63.9 7.5 0.00026 34.0 4.6 21 54-74 4-24 (138)
104 3cqy_A Anhydro-N-acetylmuramic 63.9 13 0.00044 38.3 7.1 72 351-426 266-342 (370)
105 2zf5_O Glycerol kinase; hypert 61.7 5.3 0.00018 43.3 4.0 21 53-73 3-23 (497)
106 3g25_A Glycerol kinase; IDP007 61.7 5.3 0.00018 43.3 4.0 21 53-73 6-26 (501)
107 1vhx_A Putative holliday junct 61.5 4.8 0.00016 35.9 3.0 20 53-72 3-22 (150)
108 3aap_A Ectonucleoside triphosp 60.3 11 0.00039 38.6 6.0 17 238-254 141-157 (353)
109 3cj1_A Ectonucleoside triphosp 59.7 53 0.0018 34.9 11.2 20 52-71 33-52 (456)
110 3djc_A Type III pantothenate k 59.7 6.9 0.00024 38.5 4.1 20 54-73 3-22 (266)
111 4fla_A Regulation of nuclear P 57.0 78 0.0027 27.9 10.0 103 546-648 16-145 (152)
112 2ews_A Pantothenate kinase; PA 56.1 7.2 0.00024 38.8 3.5 22 52-73 19-40 (287)
113 1hjr_A Holliday junction resol 54.9 13 0.00044 33.3 4.7 18 54-71 2-19 (158)
114 2itm_A Xylulose kinase, xylulo 54.9 7.9 0.00027 41.7 3.9 20 54-73 1-20 (484)
115 3cet_A Conserved archaeal prot 54.8 8.7 0.0003 38.8 3.9 38 217-255 108-145 (334)
116 2d4w_A Glycerol kinase; alpha 52.5 8.9 0.0003 41.5 3.9 20 54-73 3-22 (504)
117 4ep4_A Crossover junction endo 51.0 10 0.00034 34.3 3.3 19 54-72 2-20 (166)
118 3nmd_A CGMP dependent protein 46.0 85 0.0029 23.8 7.1 39 564-602 32-70 (72)
119 1zc6_A Probable N-acetylglucos 45.5 14 0.00049 36.8 3.8 64 354-426 228-293 (305)
120 2gup_A ROK family protein; sug 45.3 46 0.0016 32.7 7.6 42 211-254 93-135 (292)
121 1h7c_A Tubulin-specific chaper 44.3 1.3E+02 0.0043 24.9 8.8 81 557-638 16-103 (108)
122 2aa4_A Mannac kinase, putative 43.3 31 0.0011 33.8 6.0 47 379-425 234-287 (289)
123 1zbs_A Hypothetical protein PG 43.0 10 0.00035 37.6 2.3 68 353-426 211-280 (291)
124 1zc6_A Probable N-acetylglucos 41.9 22 0.00075 35.4 4.6 56 187-249 77-134 (305)
125 2pih_A Protein YMCA; regulate 40.2 1.9E+02 0.0065 25.3 12.2 57 606-662 67-132 (151)
126 3sk3_A Acetate kinase, acetoki 40.0 1.5E+02 0.005 30.9 10.4 47 353-402 317-364 (415)
127 2zqm_A Prefoldin beta subunit 39.9 1.6E+02 0.0053 24.2 10.0 45 605-650 66-110 (117)
128 1hnj_A Beta-ketoacyl-acyl carr 37.6 39 0.0013 33.6 5.7 50 353-405 212-261 (317)
129 1zbs_A Hypothetical protein PG 37.5 26 0.00088 34.6 4.2 61 185-249 59-121 (291)
130 2hc5_A ORF 99, hypothetical pr 35.1 58 0.002 27.4 5.4 43 517-566 56-99 (117)
131 1saz_A Probable butyrate kinas 35.1 59 0.002 33.5 6.7 49 378-426 295-348 (381)
132 2h3g_X Biosynthetic protein; p 34.8 30 0.001 33.9 4.1 20 55-74 2-21 (268)
133 1zxo_A Conserved hypothetical 34.0 8.1 0.00028 38.4 -0.2 68 355-426 211-278 (291)
134 3zx3_A Ectonucleoside triphosp 33.4 71 0.0024 33.8 7.0 40 216-255 151-199 (452)
135 2dfs_A Myosin-5A; myosin-V, in 33.3 2.3E+02 0.0077 33.6 12.0 13 52-64 220-232 (1080)
136 3o8m_A Hexokinase; rnaseh-like 33.3 1.2E+02 0.0042 32.3 8.8 22 238-259 81-102 (485)
137 3htv_A D-allose kinase, alloki 32.5 80 0.0027 31.3 7.0 48 378-425 239-298 (310)
138 1saz_A Probable butyrate kinas 31.8 39 0.0013 34.9 4.7 21 53-73 2-22 (381)
139 1woq_A Inorganic polyphosphate 31.7 41 0.0014 32.6 4.6 41 212-254 114-158 (267)
140 1ub7_A 3-oxoacyl-[acyl-carrier 31.4 52 0.0018 32.8 5.5 49 354-405 215-263 (322)
141 3mxz_A Tubulin-specific chaper 30.9 2.3E+02 0.008 23.6 9.0 80 557-637 17-105 (116)
142 3epq_A Putative fructokinase; 30.8 36 0.0012 33.8 4.0 41 212-254 97-140 (302)
143 3epq_A Putative fructokinase; 30.4 1E+02 0.0036 30.4 7.5 21 53-73 3-23 (302)
144 2ebd_A 3-oxoacyl-[acyl-carrier 30.4 57 0.0019 32.2 5.5 48 355-405 206-253 (309)
145 1gs9_A Apolipoprotein E, APOE4 30.1 2.4E+02 0.0082 25.1 9.0 54 577-642 108-161 (165)
146 1zxo_A Conserved hypothetical 29.7 23 0.00079 35.0 2.4 59 186-248 58-118 (291)
147 2hoe_A N-acetylglucosamine kin 29.0 1.1E+02 0.0039 31.2 7.7 47 379-425 315-370 (380)
148 3fcg_A F1 capsule-anchoring pr 28.8 1.3E+02 0.0043 24.0 6.0 56 479-548 25-80 (90)
149 2gup_A ROK family protein; sug 28.5 35 0.0012 33.5 3.5 48 379-426 228-287 (292)
150 2odv_A Plectin 1, HD1; plakin 28.2 3.6E+02 0.012 25.5 10.4 46 550-597 39-84 (235)
151 1zow_A 3-oxoacyl-[acyl-carrier 27.9 1.1E+02 0.0038 30.0 7.2 49 354-405 207-255 (313)
152 1mzj_A Beta-ketoacylsynthase I 27.7 1E+02 0.0036 30.8 7.0 49 354-405 226-274 (339)
153 1nfn_A Apolipoprotein E3; lipi 27.1 90 0.0031 28.7 5.7 23 574-596 105-127 (191)
154 3lay_A Zinc resistance-associa 27.0 3.5E+02 0.012 24.3 10.1 65 550-622 66-130 (175)
155 2x3e_A 3-oxoacyl-[acyl-carrier 26.5 1.1E+02 0.0038 30.4 7.0 49 354-405 219-267 (331)
156 3htv_A D-allose kinase, alloki 26.4 44 0.0015 33.3 3.8 21 53-73 7-27 (310)
157 2yhw_A Bifunctional UDP-N-acet 26.2 48 0.0016 33.4 4.1 41 212-254 131-174 (343)
158 1kae_A HDH, histidinol dehydro 25.9 1.1E+02 0.0039 31.8 6.7 65 186-254 154-242 (434)
159 1msz_A DNA-binding protein smu 25.4 50 0.0017 26.1 3.0 28 189-216 34-61 (86)
160 3t69_A Putative 2-dehydro-3-de 24.5 50 0.0017 33.3 3.7 47 380-428 260-306 (330)
161 4am6_A Actin-like protein ARP8 24.5 32 0.0011 38.0 2.5 48 356-403 476-525 (655)
162 2yhw_A Bifunctional UDP-N-acet 24.0 1.5E+02 0.0051 29.6 7.4 21 53-73 30-50 (343)
163 1qsd_A Protein (beta-tubulin b 23.9 2.3E+02 0.0078 23.2 6.9 80 557-637 13-97 (106)
164 3f9m_A Glucokinase; hexokinase 23.7 1.5E+02 0.0052 31.4 7.4 51 237-290 77-136 (470)
165 2yhx_A Hexokinase B; transfera 23.7 2.5E+02 0.0085 29.6 9.2 23 238-260 62-84 (457)
166 2f9w_A Pantothenate kinase; CO 23.4 56 0.0019 31.9 3.8 19 53-71 23-41 (271)
167 1g99_A Acetate kinase; alpha/b 23.1 61 0.0021 33.6 4.1 46 353-402 301-347 (408)
168 3cet_A Conserved archaeal prot 22.9 52 0.0018 33.2 3.4 39 54-92 1-44 (334)
169 1m1j_B Fibrinogen beta chain; 22.4 5.4E+02 0.019 27.0 11.2 18 627-644 178-195 (464)
170 1lj2_A NSP3-C, nonstructural R 22.3 3.1E+02 0.011 22.2 7.6 65 576-643 25-90 (110)
171 2q2r_A Glucokinase 1, putative 22.2 53 0.0018 33.6 3.5 21 52-72 28-48 (373)
172 1u6e_A 3-oxoacyl-[acyl-carrier 22.2 1.6E+02 0.0054 29.2 7.1 48 355-405 228-275 (335)
173 3hm8_A Hexokinase-3; glucose, 22.0 73 0.0025 33.6 4.5 53 201-254 162-217 (445)
174 4dfe_A 3-oxoacyl-[acyl-carrier 22.0 1.7E+02 0.0058 29.2 7.3 50 353-405 228-277 (333)
175 3mcp_A Glucokinase; structural 21.6 80 0.0027 32.4 4.7 22 50-71 6-27 (366)
176 3s84_A Apolipoprotein A-IV; fo 21.5 5.5E+02 0.019 24.8 11.3 19 577-595 46-64 (273)
177 3qvl_A Putative hydantoin race 21.2 1.1E+02 0.0036 29.4 5.2 53 359-421 160-212 (245)
178 3f9m_A Glucokinase; hexokinase 21.0 79 0.0027 33.6 4.5 52 200-252 185-239 (470)
179 3lm2_A Putative kinase; struct 20.1 49 0.0017 31.4 2.5 39 211-254 90-128 (226)
No 1
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=8.5e-111 Score=951.77 Aligned_cols=597 Identities=61% Similarity=0.967 Sum_probs=578.4
Q ss_pred CceEEEEcCCceEEEEEEECCceEEEeCCCCCcccceEEEEccCCcEEEcHHHHHhhhhCCCchHHHhhhhhcCCCCCHH
Q 005807 53 NDVIGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPANTLFGTKRLIGRRFNDAQ 132 (676)
Q Consensus 53 ~~vvGID~GTt~s~va~~~~~~~~vi~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llg~~~~d~~ 132 (676)
..+||||||||||+||++.+|.++++.|..|++++||+|+|+++++++||..|+.+...+|.++++++||+||+.++++.
T Consensus 2 ~~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~ 81 (605)
T 4b9q_A 2 GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE 81 (605)
T ss_dssp CCEEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBTTSHH
T ss_pred CcEEEEEcCCCcEEEEEEECCEEEEEECCCCCcccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCCCCHH
Confidence 46999999999999999999999999999999999999999878899999999999999999999999999999999999
Q ss_pred HHHHhccCCeEEEeCCCCCeEEEeCCeeeCHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCCCCHHHHHHHHHHHHHc
Q 005807 133 TQKEMKMVPFKIVNAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIA 212 (676)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ev~a~~L~~l~~~a~~~l~~~~~~~VITVPa~~~~~qr~~l~~Aa~~A 212 (676)
++...+.+||.++...+|.+.+..+++.++|+++++++|++|++.++.+++.++.++|||||+||++.||++|++|++.|
T Consensus 82 v~~~~~~~p~~~~~~~~g~~~~~~~~~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~~~Aa~~A 161 (605)
T 4b9q_A 82 VQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIA 161 (605)
T ss_dssp HHHHHTTCSSEEEECTTSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHHT
T ss_pred HHHHhhcCCeEEEEcCCCceEEEECCEEECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHc
Confidence 99999999999999999999999899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEEeeChhHHHHHhccccCCC-C-eEEEEeeCCceeEEEEEEEeC----CeEEEEEecCCCCcchHHHHHHHHHHHH
Q 005807 213 GLDVQRIINEPTAAALSYGMNNKE-G-LIAVFDLGGGTFDVSVLEISN----GVFEVKATNGDTFLGGEDFDNALLEFLV 286 (676)
Q Consensus 213 Gl~~~~li~Ep~AAal~y~~~~~~-~-~vlV~D~GgGT~Dvsv~~~~~----~~~~v~~~~g~~~lGG~~~D~~l~~~l~ 286 (676)
||+++++++||+|||++|+..... + +++|||+||||||++++++.+ +.++++++.++.++||.+||..|++|+.
T Consensus 162 Gl~v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~~l~~~l~ 241 (605)
T 4b9q_A 162 GLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLV 241 (605)
T ss_dssp TCEEEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHHHHHHHHH
T ss_pred CCceEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHHHHHHHHH
Confidence 999999999999999999987643 3 999999999999999999998 9999999999999999999999999999
Q ss_pred HHhhhhccCCCccCHHHHHHHHHHHHHHHHHcCCCCceeeeccccccCCCCCeeeEEEEcHHHHHHHHhHHHHHHHHHHH
Q 005807 287 SEFKRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKFETLVNHLIERTKAPCK 366 (676)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~~~~~~~g~~~~~~~itr~~fe~~~~~~v~~i~~~i~ 366 (676)
++|+++++.++..+++++.+|+.+||++|+.||......+.++++..+..++.++.+.|||++|+++++|+++++..+|+
T Consensus 242 ~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~~~~i~~~v~ 321 (605)
T 4b9q_A 242 EEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLK 321 (605)
T ss_dssp HHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHHHHHHHHHHHHHTTHHHH
T ss_pred HHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998887766778899999999999999999999999999
Q ss_pred HHHHHcCCCcCCCcEEEEEcCCcCcHHHHHHHHHHhCCCCCCCCCcchhHhhHHHHHhhhccCCCceeEEEeecccccce
Q 005807 367 NCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGI 446 (676)
Q Consensus 367 ~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~fg~~~~~~~~p~~aVa~GAal~a~~l~~~~~~~~~~d~~~~s~gi 446 (676)
++|+++++...+|+.|+||||+|++|+|++.|++.||.++....||++|||+|||++|+.+++..+++++.|++|+|||+
T Consensus 322 ~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAai~a~~l~~~~~~~~l~dv~p~slgi 401 (605)
T 4b9q_A 322 VALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGI 401 (605)
T ss_dssp HHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHHTSCCCSSSCTTTHHHHHHHHHHHHHHTSSCSEEEECBCSSCEEE
T ss_pred HHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHhccCcCCCcChhHHHHHhHHHHHHHhcCCCCceEEEeeeeeEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeCCeEEEEEcCCCCCCCccceeeeecccCCceeEEEEeecCccccccccceeEEEEcCCCCCCCCCCeeEEEEEEcCC
Q 005807 447 ETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMAADNKALGEFELMGIPPAPRGIPQIEVTFDIDAN 526 (676)
Q Consensus 447 ~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~ge~~~~~~~~~lg~~~l~~~~~~~~g~~~i~v~f~~d~~ 526 (676)
++.+|.|.+|||||++||++++++|++..|||+.+.|+|||||+.++.+|+.||+|.|.++||.|+|.++|+|+|++|.|
T Consensus 402 e~~~g~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~ 481 (605)
T 4b9q_A 402 ETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDAD 481 (605)
T ss_dssp EETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTCCCEEEEEEECTT
T ss_pred EEcCCEEEEEEeCCCcCCcceEEEeeeecccCceEEEEEEeccccccccCCEeeEEEEeCCCCCcCCCceEEEEEEEcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEEEEecCCCceeeEEeccCCCCCHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCHHH
Q 005807 527 GIVTVSAKDKATGKEQQITIRSSGGLSESEIEKMVKEAELHAQRDQERKTLIDIRNNADTTIYSIEKSLGEYREKIPGEV 606 (676)
Q Consensus 527 g~l~v~~~~~~t~~~~~~~i~~~~~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~le~~i~~~~~~l~~~~~~~~~~~ 606 (676)
|+|+|++.++.||++.+++|.+..+||++||++|++++++++++|++.+++.++||++|+|+|++++.|+++.+++++++
T Consensus 482 gil~v~a~~~~tg~~~~i~i~~~~~ls~~ei~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~~~~~~~~~~~~~ 561 (605)
T 4b9q_A 482 GILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKCEELVQTRNQGDHLLHSTRKQVEEAGDKLPADD 561 (605)
T ss_dssp SCEEEEEEETTTCCEECCEEESCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSCHHH
T ss_pred cEEEEEEEecCCCcEEEEEecCCCCCCHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhCCHHH
Confidence 99999999999999999999988899999999999999999999999999999999999999999999998888999999
Q ss_pred HHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHhc
Q 005807 607 AKEIEDAVSDLRKAMAGEDIDGIKAKLDAANKAVSKIGQHMAG 649 (676)
Q Consensus 607 ~~~~~~~~~~~~~wl~~~~~~~~~~~~~~L~~~~~~i~~~~~~ 649 (676)
|+++.+.++++++||++++.+++++++++|++.+.++++++|+
T Consensus 562 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 604 (605)
T 4b9q_A 562 KTAIESALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp HHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999986
No 2
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=6e-108 Score=928.42 Aligned_cols=597 Identities=62% Similarity=0.969 Sum_probs=571.6
Q ss_pred CceEEEEcCCceEEEEEEECCceEEEeCCCCCcccceEEEEccCCcEEEcHHHHHhhhhCCCchHHHhhhhhcCCCCCHH
Q 005807 53 NDVIGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPANTLFGTKRLIGRRFNDAQ 132 (676)
Q Consensus 53 ~~vvGID~GTt~s~va~~~~~~~~vi~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llg~~~~d~~ 132 (676)
..+||||||||||+||++.+|.++++.|+.|++++||+|+|+++++++||+.|+.+...+|.++++++||+||+.++++.
T Consensus 2 ~~viGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~~~d~~ 81 (605)
T 2kho_A 2 GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE 81 (605)
T ss_dssp --CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTTCBSSSTT
T ss_pred CCEEEEEcCCcCEEEEEEECCEEEEEECCCCCcccceEEEEECCCcEEECHHHHHHhhhCCCCEeehhhHhhCCCCCcHH
Confidence 35899999999999999999999999999999999999999878899999999999999999999999999999999999
Q ss_pred HHHHhccCCeEEEeCCCCCeEEEeCCeeeCHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCCCCHHHHHHHHHHHHHc
Q 005807 133 TQKEMKMVPFKIVNAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIA 212 (676)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ev~a~~L~~l~~~a~~~l~~~~~~~VITVPa~~~~~qr~~l~~Aa~~A 212 (676)
++...+.+||.++.+.+|.+.+..+++.++|+++++++|++|++.|+.+++.++.++|||||+||++.||+++++|++.|
T Consensus 82 v~~~~~~~p~~~~~~~~g~~~i~~~g~~~~~~ei~a~~L~~l~~~ae~~l~~~v~~~VitVPa~f~d~qr~a~~~A~~~A 161 (605)
T 2kho_A 82 VQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIA 161 (605)
T ss_dssp HHHHHHHCSSCEEECTTSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHHHTT
T ss_pred HHHHhhcCCeEEEECCCCceEEEECCEEEcHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEECCCCCHHHHHHHHHHHHHc
Confidence 99999999999988888988888888999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEEeeChhHHHHHhccccCC-C-CeEEEEeeCCceeEEEEEEEe----CCeEEEEEecCCCCcchHHHHHHHHHHHH
Q 005807 213 GLDVQRIINEPTAAALSYGMNNK-E-GLIAVFDLGGGTFDVSVLEIS----NGVFEVKATNGDTFLGGEDFDNALLEFLV 286 (676)
Q Consensus 213 Gl~~~~li~Ep~AAal~y~~~~~-~-~~vlV~D~GgGT~Dvsv~~~~----~~~~~v~~~~g~~~lGG~~~D~~l~~~l~ 286 (676)
||+++++++||+|||++|+.+.. . .++||||+||||||+|++++. ++.++++++.|+.++||++||+.|++|+.
T Consensus 162 Gl~v~~li~EP~AAAlay~l~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~~l~~~l~ 241 (605)
T 2kho_A 162 GLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLV 241 (605)
T ss_dssp TCEEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHHHHHHHHH
T ss_pred CCceEEEecCHHHHHHHhhhcccCCCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHHHHHHHHH
Confidence 99999999999999999998864 3 399999999999999999998 78999999999999999999999999999
Q ss_pred HHhhhhccCCCccCHHHHHHHHHHHHHHHHHcCCCCceeeeccccccCCCCCeeeEEEEcHHHHHHHHhHHHHHHHHHHH
Q 005807 287 SEFKRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKFETLVNHLIERTKAPCK 366 (676)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~~~~~~~g~~~~~~~itr~~fe~~~~~~v~~i~~~i~ 366 (676)
++|+++++.++..+++++.+|+.+||++|+.||......+.++.+..+.+|+.++.+.|||++|+++++|+++++..+|+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i~ 321 (605)
T 2kho_A 242 EEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLK 321 (605)
T ss_dssp HHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHTTCCSTTGGGTSHHH
T ss_pred HHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEecccccCCCCceEEEEEEeHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988999888766544446778899999999999999999999999
Q ss_pred HHHHHcCCCcCCCcEEEEEcCCcCcHHHHHHHHHHhCCCCCCCCCcchhHhhHHHHHhhhccCCCceeEEEeecccccce
Q 005807 367 NCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGI 446 (676)
Q Consensus 367 ~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~fg~~~~~~~~p~~aVa~GAal~a~~l~~~~~~~~~~d~~~~s~gi 446 (676)
++|+++++...+|+.|+||||+|++|+|++.|++.||.++....||++|||+|||++|+.+++.++++++.|++|++||+
T Consensus 322 ~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~fg~~~~~~~npd~aVA~GAa~~a~~l~~~~~~~~l~dv~p~slgi 401 (605)
T 2kho_A 322 VALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGI 401 (605)
T ss_dssp HHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHHTTTTTSCCCCCCSBCCCCCEEE
T ss_pred HHHHHcCCChhhCceEEEECCcccChHHHHHHHHhcCCCcCcCCCcchHHHHHHHHHHHHhcCCccCceEEeeeeeeccc
Confidence 99999999989999999999999999999999999998888999999999999999999999988899999999999999
Q ss_pred eeeCCeEEEEEcCCCCCCCccceeeeecccCCceeEEEEeecCccccccccceeEEEEcCCCCCCCCCCeeEEEEEEcCC
Q 005807 447 ETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMAADNKALGEFELMGIPPAPRGIPQIEVTFDIDAN 526 (676)
Q Consensus 447 ~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~ge~~~~~~~~~lg~~~l~~~~~~~~g~~~i~v~f~~d~~ 526 (676)
++.+|.|.+||+||++||++++++|++..|+|+.+.|+|||||+.++.+|+.||+|.|.++||.|+|.++|+|+|++|.|
T Consensus 402 ~~~~g~~~~li~r~t~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~ 481 (605)
T 2kho_A 402 ETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDAD 481 (605)
T ss_dssp EETTTEEEEEECTTBCSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCSCCTTCSCEEEEEEECTT
T ss_pred cccCCceEEEEecccccCccceEEEEecCCCceEEEEEEEeccCcccccCcEEeEEEecCCCCCCCCCcEEEEEEEEcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEEEEecCCCceeeEEeccCCCCCHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCHHH
Q 005807 527 GIVTVSAKDKATGKEQQITIRSSGGLSESEIEKMVKEAELHAQRDQERKTLIDIRNNADTTIYSIEKSLGEYREKIPGEV 606 (676)
Q Consensus 527 g~l~v~~~~~~t~~~~~~~i~~~~~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~le~~i~~~~~~l~~~~~~~~~~~ 606 (676)
|+|+|++.|+.||++.+++|+...+||++||++|++++++++++|++++++.+++|++|+|+|++++.|+++.+++++++
T Consensus 482 gil~v~a~~~~tg~~~~i~i~~~~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l~~~~~~~~~~~ 561 (605)
T 2kho_A 482 GILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFDELVQTRNQGDHLLHSTRKQVEEAGDKLPADD 561 (605)
T ss_dssp SCEEEEEEETTTCCEEEEEECTTSSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSCHHH
T ss_pred CceeEEEEEcCCCceeecccccccCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCHHH
Confidence 99999999999999999999988889999999999999999999999999999999999999999999988888999999
Q ss_pred HHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHhc
Q 005807 607 AKEIEDAVSDLRKAMAGEDIDGIKAKLDAANKAVSKIGQHMAG 649 (676)
Q Consensus 607 ~~~~~~~~~~~~~wl~~~~~~~~~~~~~~L~~~~~~i~~~~~~ 649 (676)
|+++.+.++++++||++++.+++++++++|++.+.++..++|+
T Consensus 562 ~~~i~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 604 (605)
T 2kho_A 562 KTAIESALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp HHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHTTCHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999989999999999999999999999986
No 3
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=6.4e-103 Score=892.94 Aligned_cols=589 Identities=26% Similarity=0.426 Sum_probs=547.5
Q ss_pred CceEEEEcCCceEEEEEEECCceEEEeCCCCCcccceEEEEccCCcEEEcHHHHHhhhhCCCchHHHhhhhhcCCCCCHH
Q 005807 53 NDVIGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPANTLFGTKRLIGRRFNDAQ 132 (676)
Q Consensus 53 ~~vvGID~GTt~s~va~~~~~~~~vi~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llg~~~~d~~ 132 (676)
+.+||||||||||+||++.+|+++++.|+.|++.+||+|+|.+ ++++||..|+.++..+|.++++++||+||+.++++.
T Consensus 2 m~~iGIDlGTtns~va~~~~g~~~ii~n~~g~r~tPS~Vaf~~-~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~ 80 (675)
T 3d2f_A 2 STPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGP-KNRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPD 80 (675)
T ss_dssp CCCEEEECCSSEEEEEEEETTEEEEECCTTSCSSEECCEEECS-SSEEETHHHHHHHTTCGGGEECCHHHHTTCBTTCTT
T ss_pred CcEEEEEcCCCcEEEEEEECCeeEEEECCCCCcccceEEEECC-CcEEecHHHHHhhhhChHhHHHHHHHHhCCCCCcHH
Confidence 4599999999999999999999999999999999999999964 579999999999999999999999999999999999
Q ss_pred HHHHhccCCeEEEeCCCCCeEEEe--CC--eeeCHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCCCCHHHHHHHHHH
Q 005807 133 TQKEMKMVPFKIVNAPNGDAWVEA--NG--QQYSPSQIGAFVLTKMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDA 208 (676)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~v~~--~~--~~~~~~ev~a~~L~~l~~~a~~~l~~~~~~~VITVPa~~~~~qr~~l~~A 208 (676)
++...+++||.+++..+|.+.+.. .+ +.++|+++++++|++|++.|+.+++.++.++|||||++|++.||+++++|
T Consensus 81 v~~~~~~~p~~v~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~A 160 (675)
T 3d2f_A 81 FEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADA 160 (675)
T ss_dssp HHHHHTTCCSEEEECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHhhCCeeEEEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHH
Confidence 999999999999988888877653 33 67999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCeEEeeChhHHHHHhccccC-------CCC-eEEEEeeCCceeEEEEEEEeCCeEEEEEecCCCCcchHHHHHH
Q 005807 209 GRIAGLDVQRIINEPTAAALSYGMNN-------KEG-LIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNA 280 (676)
Q Consensus 209 a~~AGl~~~~li~Ep~AAal~y~~~~-------~~~-~vlV~D~GgGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~ 280 (676)
++.|||+++++++||+|||++|+..+ ..+ ++||||+||||||+|++++.++.++++++.|+.++||++||+.
T Consensus 161 a~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~ 240 (675)
T 3d2f_A 161 ARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLA 240 (675)
T ss_dssp HHHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHH
T ss_pred HHHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHHHHHHH
Confidence 99999999999999999999998754 223 8999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhccCCCccCHHHHHHHHHHHHHHHHHcCCCCceeeeccccccCCCCCeeeEEEEcHHHHHHHHhHHHHH
Q 005807 281 LLEFLVSEFKRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKFETLVNHLIER 360 (676)
Q Consensus 281 l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~~~~~~~g~~~~~~~itr~~fe~~~~~~v~~ 360 (676)
|++|+..+|+++++.++..+++++.+|+.+||++|+.||......+.++.+..+ .++.+.|||++|++++.|++++
T Consensus 241 l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g----~~~~~~itr~~fe~l~~~l~~~ 316 (675)
T 3d2f_A 241 ITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMND----VDVSSQLSREELEELVKPLLER 316 (675)
T ss_dssp HHHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSS----CCEEEEEEHHHHHHHTHHHHTT
T ss_pred HHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccC----ceEEEEEeHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999988888888876554 6788999999999999999999
Q ss_pred HHHHHHHHHHHcCCCcCCCcEEEEEcCCcCcHHHHHHHHHHhCCCCCCCCCcchhHhhHHHHHhhhccCC--CceeEEEe
Q 005807 361 TKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIFGKSPSKGVNPDEAVALGAAIQGGILRGD--VKELLLLD 438 (676)
Q Consensus 361 i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~fg~~~~~~~~p~~aVa~GAal~a~~l~~~--~~~~~~~d 438 (676)
+..+|+++|+++++++.+|+.|+||||+|++|+|++.|++.||.++..+.||++|||+|||++|+.+++. ++++.+.|
T Consensus 317 i~~~i~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAa~~a~~ls~~~~v~~~~l~D 396 (675)
T 3d2f_A 317 VTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICAIHSPTLRVRPFKFED 396 (675)
T ss_dssp TTHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHHTSCEECCSCTTTHHHHHHHHHHHHTCSSCCCCCCEEEE
T ss_pred HHHHHHHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhcCCCccccCCcchHHHHHHHHHHHHhCCCCcccceEEEe
Confidence 9999999999999999999999999999999999999999999888899999999999999999999985 67899999
Q ss_pred ecccccceeeeCCe----EEEEEcCCCCCCCccceeeeecccCCceeEEEEeecCccccc-cccceeEEEEcCCCCCCCC
Q 005807 439 VTPLSLGIETLGGI----FTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMAA-DNKALGEFELMGIPPAPRG 513 (676)
Q Consensus 439 ~~~~s~gi~~~~~~----~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~ge~~~~~-~~~~lg~~~l~~~~~~~~g 513 (676)
++|+||||++.++. |.+|||||++||++++++|++..|+| +.+. |+|++.++. +|..||+|.|.|+||.++|
T Consensus 397 v~p~slgi~~~~~~~~~~~~~li~rnt~iP~~k~~~f~~~~~~~--~~~~-~~ge~~~~~~~n~~lg~f~l~gi~~~~~g 473 (675)
T 3d2f_A 397 IHPYSVSYSWDKQVEDEDHMEVFPAGSSFPSTKLITLNRTGDFS--MAAS-YTDITQLPPNTPEQIANWEITGVQLPEGQ 473 (675)
T ss_dssp EECSCEEEEECCTTCSCSEEEEECTTEEESEEEEEEEEESSCEE--EEEE-ESCGGGSCTTCCSEEEEEEEECCCCCSSC
T ss_pred eeecceEeeecCCCCCcceEEEEcCCCCCCcccceeeeecCCce--EEEE-EcCCcccccccCceeeEEEecCcCCCCCC
Confidence 99999999998874 99999999999999999999886643 3332 779998887 9999999999999999999
Q ss_pred CC-eeEEEEEEcCCccEEEEEE----------ecCCCceeeEEeccC-CCCCHHHHHHHHHHHHHhhHhHHHHHHHHHHH
Q 005807 514 IP-QIEVTFDIDANGIVTVSAK----------DKATGKEQQITIRSS-GGLSESEIEKMVKEAELHAQRDQERKTLIDIR 581 (676)
Q Consensus 514 ~~-~i~v~f~~d~~g~l~v~~~----------~~~t~~~~~~~i~~~-~~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~~ 581 (676)
.+ +|+|+|++|.||+|+|++. ++.||++..++|+.. .+||++||++|+++++++.++|++++++.+++
T Consensus 474 ~~~~i~v~f~id~~Gil~V~a~~~~~~~~~~~~~~t~~~~~i~i~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~~~ 553 (675)
T 3d2f_A 474 DSVPVKLKLRCDPSGLHTIEEAYTIEDIEAGSDTKTVKKDDLTIVAHTFGLDAKKLNELIEKENEMLAQDKLVAETEDRK 553 (675)
T ss_dssp SCEEEEEEEEECTTSCEEEEEEEEECC------CCCCEEEECEEEEECSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcceEEEEEEEcCCCcEEEEEEEEeecccccccccCcceeeEEEecCCCCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 74 9999999999999999995 789999999999875 48999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhh-hhcCCCHHHHHHHHHHHHHHHHhhccCC----hHHHHHHHHHHHHHHHHHHHHHhc
Q 005807 582 NNADTTIYSIEKSLGE-YREKIPGEVAKEIEDAVSDLRKAMAGED----IDGIKAKLDAANKAVSKIGQHMAG 649 (676)
Q Consensus 582 n~le~~i~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~wl~~~~----~~~~~~~~~~L~~~~~~i~~~~~~ 649 (676)
|+||+|+|++++.|++ +.+++++++++++.+.|+++++||++++ .++|++++++|++.+.+|..+++.
T Consensus 554 n~le~~i~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~wl~~~~~~~~~~~~~~~~~~l~~~~~~i~~r~~e 626 (675)
T 3d2f_A 554 NTLEEYIYTLRGKLEEEYAPFASDAEKTKLQGMLNKAEEWLYDEGFDSIKAKYIAKYEELASLGNIIRGRYLA 626 (675)
T ss_dssp HHHHHHHHHHHHHHTTTTGGGSCHHHHHHHHHHHHHHHHHTTTGGGGCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999964 7889999999999999999999998653 788999999999999999988763
No 4
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=4e-97 Score=832.18 Aligned_cols=538 Identities=53% Similarity=0.858 Sum_probs=506.6
Q ss_pred CCceEEEEcCCceEEEEEEECCceEEEeCCCCCcccceEEEEccCCcEEEcHHHHHhhhhCCCchHHHhhhhhcCCCCCH
Q 005807 52 GNDVIGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPANTLFGTKRLIGRRFNDA 131 (676)
Q Consensus 52 ~~~vvGID~GTt~s~va~~~~~~~~vi~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llg~~~~d~ 131 (676)
++.+||||||||||+||++.+|.++++.|+.|++++||+|+|++ ++++||+.|+.++..+|.++++++|||||+.++|+
T Consensus 3 m~~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~-~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~ 81 (554)
T 1yuw_A 3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD-TERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDA 81 (554)
T ss_dssp SCCCEEEEECSSEEEEEEECSSSEEECCCTTSCSEEECCEEECS-SCEEETHHHHTTTTTCGGGEECCGGGTTTCCSSCS
T ss_pred CCCEEEEEeCcccEEEEEEECCEEEEEECCCCCeecceEEEEcC-CcEEEcHHHHHhhhhChhhehHhhHHhcCCCCCcH
Confidence 45699999999999999999999999999999999999999964 57899999999999999999999999999999999
Q ss_pred HHHHHhccCCeEEEeCCCCCeEEE--eC--CeeeCHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCCCCHHHHHHHHH
Q 005807 132 QTQKEMKMVPFKIVNAPNGDAWVE--AN--GQQYSPSQIGAFVLTKMKETAESYLGKSVSEAVITVPAYFNDAQRQATKD 207 (676)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~v~--~~--~~~~~~~ev~a~~L~~l~~~a~~~l~~~~~~~VITVPa~~~~~qr~~l~~ 207 (676)
.++..++.+||.++. .+|.+.+. .. .+.++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++
T Consensus 82 ~v~~~~~~~p~~v~~-~~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~~v~~~VitVPa~f~~~qr~a~~~ 160 (554)
T 1yuw_A 82 VVQSDMKHWPFMVVN-DAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKD 160 (554)
T ss_dssp HHHHHHTTCSSEEEE-ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHH
T ss_pred HHHHHhhcCCeEEEe-cCCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHH
Confidence 999999999999985 36666544 23 37899999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCeEEeeChhHHHHHhccccCC--C-CeEEEEeeCCceeEEEEEEEeCCeEEEEEecCCCCcchHHHHHHHHHH
Q 005807 208 AGRIAGLDVQRIINEPTAAALSYGMNNK--E-GLIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEF 284 (676)
Q Consensus 208 Aa~~AGl~~~~li~Ep~AAal~y~~~~~--~-~~vlV~D~GgGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l~~~ 284 (676)
|++.|||+++++++||+|||++|+..+. . ..++|||+||||||++++++.++.++++++.++.++||++||+.|++|
T Consensus 161 A~~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~ 240 (554)
T 1yuw_A 161 AGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMVNH 240 (554)
T ss_dssp HHHTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHH
T ss_pred HHHHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHHHHHHHHHHH
Confidence 9999999999999999999999998764 2 389999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhccCCCccCHHHHHHHHHHHHHHHHHcCCCCceeeeccccccCCCCCeeeEEEEcHHHHHHHHhHHHHHHHHH
Q 005807 285 LVSEFKRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKFETLVNHLIERTKAP 364 (676)
Q Consensus 285 l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~~~~~~~g~~~~~~~itr~~fe~~~~~~v~~i~~~ 364 (676)
+.++|+++++.++..+++++.+|+.+||++|+.||......+.++.+..+ .++...|+|++|+++++|+++++...
T Consensus 241 l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g----~~~~~~ltr~~~e~l~~~~~~~i~~~ 316 (554)
T 1yuw_A 241 FIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEG----IDFYTSITRARFEELNADLFRGTLDP 316 (554)
T ss_dssp HHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSSS----CCEEEEEEHHHHHHHTHHHHHHTTHH
T ss_pred HHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccCC----ceEEEEEEHHHHHHHHHHHHHHHHHH
Confidence 99999999999998899999999999999999999999888888876554 67889999999999999999999999
Q ss_pred HHHHHHHcCCCcCCCcEEEEEcCCcCcHHHHHHHHHHhC-CCCCCCCCcchhHhhHHHHHhhhccCC----CceeEEEee
Q 005807 365 CKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIFG-KSPSKGVNPDEAVALGAAIQGGILRGD----VKELLLLDV 439 (676)
Q Consensus 365 i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~fg-~~~~~~~~p~~aVa~GAal~a~~l~~~----~~~~~~~d~ 439 (676)
|+++|+++++.+.+|+.|+||||+|++|+|++.|++.|+ .++..+.||++|||+|||++|+.+++. .+++.+.|+
T Consensus 317 i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~~~~~~~~~~~~~~dv 396 (554)
T 1yuw_A 317 VEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDV 396 (554)
T ss_dssp HHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTTSCCCCCTTSSCCCCB
T ss_pred HHHHHHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhcCCccccccceEEEEe
Confidence 999999999998999999999999999999999999996 778889999999999999999999874 578999999
Q ss_pred cccccceeeeCCeEEEEEcCCCCCCCccceeeeecccCCceeEEEEeecCccccccccceeEEEEcCCCCCCCCCCeeEE
Q 005807 440 TPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMAADNKALGEFELMGIPPAPRGIPQIEV 519 (676)
Q Consensus 440 ~~~s~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~ge~~~~~~~~~lg~~~l~~~~~~~~g~~~i~v 519 (676)
+|+|||+++.+|.|.++|+||++||++++++|++..|+|+.+.|.|||||+..+.+|..||+|.|.++||.|+|.++|+|
T Consensus 397 ~p~slgi~~~~g~~~~li~r~t~iP~~~~~~f~~~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v 476 (554)
T 1yuw_A 397 TPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEV 476 (554)
T ss_dssp CSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCSEEEEEEEESSSSBGGGSEEEEEEEEECCCCCSTTCCCEEE
T ss_pred eeeEEEEEecCceEEEEEECCCccCceeEEEeeeccCCCceEEEEEEecCccccccCcEEEEEEEeCCCCCcccccEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCccEEEEEEecCCCceeeEEeccC-CCCCHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005807 520 TFDIDANGIVTVSAKDKATGKEQQITIRSS-GGLSESEIEKMVKEAELHAQRDQERKTLIDIRNNADTTIYSIEKSL 595 (676)
Q Consensus 520 ~f~~d~~g~l~v~~~~~~t~~~~~~~i~~~-~~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~le~~i~~~~~~l 595 (676)
+|++|.||+|+|++.|+.||++.+++|... .+||++||++|++++++++++|++++++.++||++|+|+|++++.|
T Consensus 477 ~f~id~~gil~v~a~~~~tg~~~~~~i~~~~~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l 553 (554)
T 1yuw_A 477 TFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATV 553 (554)
T ss_dssp EEEECTTCCEEEEEEETTTCCEEEEEECCCSSCSCHHHHHHHHHHHHHTTTHHHHHTTSSCSCEECSSCCSCSCCCC
T ss_pred EEEEccCceEEEEEEeccCCCceeEEEecCCCCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999876 6699999999999999999999999999999999999999887654
No 5
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=7.8e-91 Score=775.30 Aligned_cols=507 Identities=66% Similarity=1.026 Sum_probs=475.5
Q ss_pred CceEEEEcCCceEEEEEEECCceEEEeCCCCCcccceEEEEccCCcEEEcHHHHHhhhhCCCchHHHhhhhhcCCCCCHH
Q 005807 53 NDVIGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPANTLFGTKRLIGRRFNDAQ 132 (676)
Q Consensus 53 ~~vvGID~GTt~s~va~~~~~~~~vi~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llg~~~~d~~ 132 (676)
..+||||||||||++|++.+|.|+++.|+.|++++||+|+| .+++++||+.|+.+...+| ++++++||+||+++.
T Consensus 2 ~~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~-~~~~~~vG~~A~~~~~~~p-~~~~~~Kr~lg~p~~--- 76 (509)
T 2v7y_A 2 SKIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAF-KNGERLVGEVAKRQAITNP-NTIISIKRHMGTDYK--- 76 (509)
T ss_dssp CCEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEE-SSSSEEESHHHHTTTTTCS-SEEECGGGTTTSCCC---
T ss_pred CCEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEE-CCCcEEECHHHHHhHHhCC-CcHHHHHHhcCCCcE---
Confidence 35999999999999999999999999999999999999999 5778999999999999999 999999999998442
Q ss_pred HHHHhccCCeEEEeCCCCCeEEEeCCeeeCHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCCCCHHHHHHHHHHHHHc
Q 005807 133 TQKEMKMVPFKIVNAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIA 212 (676)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ev~a~~L~~l~~~a~~~l~~~~~~~VITVPa~~~~~qr~~l~~Aa~~A 212 (676)
+..+++.++|+++++++|++|++.++.+++.++.++|||||++|++.||++|++|++.|
T Consensus 77 ---------------------~~~~g~~~~~~ei~a~~L~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a~~~A 135 (509)
T 2v7y_A 77 ---------------------VEIEGKQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGRIA 135 (509)
T ss_dssp ---------------------EEETTEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHHT
T ss_pred ---------------------EEECCEEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHc
Confidence 12355689999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEEeeChhHHHHHhccccCCCC-eEEEEeeCCceeEEEEEEEeCCeEEEEEecCCCCcchHHHHHHHHHHHHHHhhh
Q 005807 213 GLDVQRIINEPTAAALSYGMNNKEG-LIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEFKR 291 (676)
Q Consensus 213 Gl~~~~li~Ep~AAal~y~~~~~~~-~vlV~D~GgGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l~~~l~~~~~~ 291 (676)
|++++++++||+|||++|+.....+ ++||||+||||||++++++.++.++++++.++.++||.+||+.|++|+.++|++
T Consensus 136 Gl~~~~li~Ep~AAAlay~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~ 215 (509)
T 2v7y_A 136 GLEVERIINEPTAAALAYGLDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQFKQ 215 (509)
T ss_dssp TCEEEEEEEHHHHHHHHTTGGGSCSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEecCHHHHHHHHhhccCCCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999876544 999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCccCHHHHHHHHHHHHHHHHHcCCCCceeeeccccccCCCCCeeeEEEEcHHHHHHHHhHHHHHHHHHHHHHHHH
Q 005807 292 TERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKFETLVNHLIERTKAPCKNCLKD 371 (676)
Q Consensus 292 ~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~~~~~~~g~~~~~~~itr~~fe~~~~~~v~~i~~~i~~~l~~ 371 (676)
+++.++..+++++.+|+.+||++|+.||......+.++.+..+.+|..++.+.|+|++|+++++|+++++...|+++|++
T Consensus 216 ~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i~~~L~~ 295 (509)
T 2v7y_A 216 EHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGPVRQALQD 295 (509)
T ss_dssp HHSCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHTHHHHHTTHHHHHHHHHH
T ss_pred HhCCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEeccccCCCCCeeEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99989888999999999999999999999998899988776544444567889999999999999999999999999999
Q ss_pred cCCCcCCCcEEEEEcCCcCcHHHHHHHHHHhCCCCCCCCCcchhHhhHHHHHhhhccCCCceeEEEeecccccceeeeCC
Q 005807 372 ANITIKDVDEVLLVGGMTRVPKVQEIVTEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGG 451 (676)
Q Consensus 372 ~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~fg~~~~~~~~p~~aVa~GAal~a~~l~~~~~~~~~~d~~~~s~gi~~~~~ 451 (676)
+++...+|+.|+||||+|++|+|++.|++.|+.++..+.||++|||+|||++|+.+++..+++.+.|++|++||+++.++
T Consensus 296 a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~aVa~Gaa~~a~~l~~~~~~~~~~dv~p~slgi~~~~~ 375 (509)
T 2v7y_A 296 AGLTPADIDKVILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVAIGAAIQGGVIAGEVKDVVLLDVTPLSLGIETMGG 375 (509)
T ss_dssp HTCCGGGCSEEEEESGGGGCHHHHHHHHHHHSSCCBCCSCTTTHHHHHHHHHHHHHHTCCCCCCCCCBCSSEEEEEETTT
T ss_pred cCCChhHCcEEEEECCcccChHHHHHHHHHhCCCcCcCCCchhhhHhhHHHHHHHhcCCccCceEEEeeccccceeecCC
Confidence 99988899999999999999999999999999888899999999999999999999988889999999999999999999
Q ss_pred eEEEEEcCCCCCCCccceeeeecccCCceeEEEEeecCccccccccceeEEEEcCCCCCCCCCCeeEEEEEEcCCccEEE
Q 005807 452 IFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMAADNKALGEFELMGIPPAPRGIPQIEVTFDIDANGIVTV 531 (676)
Q Consensus 452 ~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~ge~~~~~~~~~lg~~~l~~~~~~~~g~~~i~v~f~~d~~g~l~v 531 (676)
.|.++|+||++||++++++|++..|+|+.+.|.|||||+..+.+|..||+|.|.++||.|+|.++|+|+|++|.||+|+|
T Consensus 376 ~~~~li~~~~~iP~~~~~~f~~~~d~q~~~~i~v~~ge~~~~~~~~~lg~~~l~~i~~~~~g~~~i~v~f~id~~gil~v 455 (509)
T 2v7y_A 376 VFTKLIERNTTIPTSKSQVFTTAADNQTTVDIHVLQGERPMAADNKSLGRFQLTGIPPAPRGVPQIEVTFDIDANGIVHV 455 (509)
T ss_dssp EEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEEESSSBGGGSEEEEEEEEECCCCCCTTCSCEEEEEEECTTSCEEE
T ss_pred ceEEEEeCCCcCCcceEEEEEeeccCcEEEEEEEEecCccccccCcEEEEEEEeCCCCCCCcccEEEEEEEEcCCceEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCceeeEEeccCCCCCHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHH
Q 005807 532 SAKDKATGKEQQITIRSSGGLSESEIEKMVKEAELHAQRDQERKTLIDIRNNAD 585 (676)
Q Consensus 532 ~~~~~~t~~~~~~~i~~~~~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~le 585 (676)
++.++.||++.+++|....+||++||++|++++++++++|++++++.++||++|
T Consensus 456 ~a~~~~~g~~~~~~i~~~~~l~~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~e 509 (509)
T 2v7y_A 456 RAKDLGTNKEQSITIKSSSGLSEEEIQRMIKEAEENAEADRKRKEAAELRNEAD 509 (509)
T ss_dssp EEEETTTCCEEEEEECSSCSCCSHHHHHHHHHHHHSCGGGGGGGGCCCC-----
T ss_pred EEEEcCCCcEEEEEEEecCCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHhhcC
Confidence 999999999999999988889999999999999999999999999999999986
No 6
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=1.6e-63 Score=541.89 Aligned_cols=372 Identities=51% Similarity=0.837 Sum_probs=347.3
Q ss_pred CCceEEEEcCCceEEEEEEECCceEEEeCCCCCcccceEEEEccCCcEEEcHHHHHhhhhCCCchHHHhhhhhcCCCCCH
Q 005807 52 GNDVIGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPANTLFGTKRLIGRRFNDA 131 (676)
Q Consensus 52 ~~~vvGID~GTt~s~va~~~~~~~~vi~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llg~~~~d~ 131 (676)
.+.+||||||||||++|++.++.++++.|+.|++++||+|+|.. ++++||..|+.++..+|.++++++|+++|+.++++
T Consensus 22 ~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~-~~~~vG~~A~~~~~~~~~~~~~~~Kr~lg~~~~~~ 100 (404)
T 3i33_A 22 SMPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD-TERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDA 100 (404)
T ss_dssp -CCCEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECCEEECS-SCEEETHHHHHTTTTCSTTEECCGGGTTTCCTTSH
T ss_pred cCCEEEEEcCCccEEEEEEECCeeEEEECCCCCcccceEEEECC-CCEEecHHHHHhhHhChhhhHHHHHHHhCCCCCcH
Confidence 35699999999999999999999999999999999999999964 48999999999999999999999999999999999
Q ss_pred HHHHHhccCCeEEEeCCCCCeEEE--eCC--eeeCHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCCCCHHHHHHHHH
Q 005807 132 QTQKEMKMVPFKIVNAPNGDAWVE--ANG--QQYSPSQIGAFVLTKMKETAESYLGKSVSEAVITVPAYFNDAQRQATKD 207 (676)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~v~--~~~--~~~~~~ev~a~~L~~l~~~a~~~l~~~~~~~VITVPa~~~~~qr~~l~~ 207 (676)
.++...+.+||.+.. .+|...+. ..+ ..++|+++++++|++|++.++.+++.++.++|||||++|++.||++|++
T Consensus 101 ~~~~~~~~~p~~~~~-~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~~ 179 (404)
T 3i33_A 101 TVQSDMKHWPFRVVS-EGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKD 179 (404)
T ss_dssp HHHHHHTTCSSEEEE-ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHH
T ss_pred HHHHHHhhCCceEEc-cCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhccCCCcEEEEECCCCCHHHHHHHHH
Confidence 999999999999986 55555533 445 7899999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCeEEeeChhHHHHHhccccCC----CC-eEEEEeeCCceeEEEEEEEeCCeEEEEEecCCCCcchHHHHHHHH
Q 005807 208 AGRIAGLDVQRIINEPTAAALSYGMNNK----EG-LIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALL 282 (676)
Q Consensus 208 Aa~~AGl~~~~li~Ep~AAal~y~~~~~----~~-~vlV~D~GgGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l~ 282 (676)
|++.|||+++.+++||+|||++|+.... .+ .++|||+||||+|++++++.++.++++++.++..+||.+||+.|.
T Consensus 180 a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~ 259 (404)
T 3i33_A 180 AGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV 259 (404)
T ss_dssp HHHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHH
T ss_pred HHHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCCCCHHHHHHHHH
Confidence 9999999999999999999999988754 33 899999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhccCCCccCHHHHHHHHHHHHHHHHHcCCCCceeeeccccccCCCCCeeeEEEEcHHHHHHHHhHHHHHHH
Q 005807 283 EFLVSEFKRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKFETLVNHLIERTK 362 (676)
Q Consensus 283 ~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~~~~~~~g~~~~~~~itr~~fe~~~~~~v~~i~ 362 (676)
+++.++|+++++.++..+++.+.+|+..||++|+.|+......+.++.+..+ .++.+.++|++|+++++|+++++.
T Consensus 260 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~g----~~~~~~i~r~~~~~~~~~~~~~i~ 335 (404)
T 3i33_A 260 SHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEG----VDFYTSITRARFEELNADLFRGTL 335 (404)
T ss_dssp HHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEETT----EEEEEEEEHHHHHHHTHHHHHHTH
T ss_pred HHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEEeeccCC----ceeEEEEcHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999888888876655 778999999999999999999999
Q ss_pred HHHHHHHHHcCCCcCCCcEEEEEcCCcCcHHHHHHHHHHh-CCCCCCCCCcchhHhhHHHHHhhhccC
Q 005807 363 APCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSPSKGVNPDEAVALGAAIQGGILRG 429 (676)
Q Consensus 363 ~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~f-g~~~~~~~~p~~aVa~GAal~a~~l~~ 429 (676)
+.|.++|+++++...+|+.|+|+||+|++|+|++.|++.| +.++..+.||++|||.|||++|+.+++
T Consensus 336 ~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 336 EPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIG 403 (404)
T ss_dssp HHHHHHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence 9999999999998889999999999999999999999999 688888999999999999999998875
No 7
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=2.8e-63 Score=536.10 Aligned_cols=376 Identities=65% Similarity=1.043 Sum_probs=348.3
Q ss_pred CceEEEEcCCceEEEEEEECCceEEEeCCCCCcccceEEEEccCCcEEEcHHHHHhhhhCCCchHHHhhhhhcCCCCCHH
Q 005807 53 NDVIGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPANTLFGTKRLIGRRFNDAQ 132 (676)
Q Consensus 53 ~~vvGID~GTt~s~va~~~~~~~~vi~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llg~~~~d~~ 132 (676)
..+||||||||||++|++.+|.++++.|+.|++.+||+|+|+++++++||+.|+.+...+|.++++++|++||+.++++.
T Consensus 2 ~~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 81 (383)
T 1dkg_D 2 GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE 81 (383)
T ss_dssp -CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTTCBSCSHH
T ss_pred CcEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECCCCEEECHHHHHhhhhCccceeehhHHhhCCCCCcHH
Confidence 35899999999999999999999999999999999999999877889999999999999999999999999999999999
Q ss_pred HHHHhccCCeEEEeCCCCCeEEEeCCeeeCHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCCCCHHHHHHHHHHHHHc
Q 005807 133 TQKEMKMVPFKIVNAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIA 212 (676)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ev~a~~L~~l~~~a~~~l~~~~~~~VITVPa~~~~~qr~~l~~Aa~~A 212 (676)
++...+.+||.++.+.++...+..+++.++|+++++++|+++++.++.+++.++.++|||||++|++.||+++++|++.|
T Consensus 82 ~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~i~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~~~a 161 (383)
T 1dkg_D 82 VQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIA 161 (383)
T ss_dssp HHHHTTTCSSEEEECSSSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHHHHHHHHHHHT
T ss_pred HHHHhhcCCeEEEEcCCCcEEEEECCEEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHc
Confidence 99999999999988888888888788899999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEEeeChhHHHHHhccccCC-C-CeEEEEeeCCceeEEEEEEEe----CCeEEEEEecCCCCcchHHHHHHHHHHHH
Q 005807 213 GLDVQRIINEPTAAALSYGMNNK-E-GLIAVFDLGGGTFDVSVLEIS----NGVFEVKATNGDTFLGGEDFDNALLEFLV 286 (676)
Q Consensus 213 Gl~~~~li~Ep~AAal~y~~~~~-~-~~vlV~D~GgGT~Dvsv~~~~----~~~~~v~~~~g~~~lGG~~~D~~l~~~l~ 286 (676)
|++++.+++||+|||++|+.... . ..++|||+||||+|+++++.. ++.++++++.++..+||.+||+.|.+++.
T Consensus 162 Gl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~ 241 (383)
T 1dkg_D 162 GLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLV 241 (383)
T ss_dssp TCEESCCCBHHHHHHHHHTCCC-CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHHHHHHHHH
T ss_pred CCceEEEeccHHHHHHHHHhccCCCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999988753 3 399999999999999999998 67889999889899999999999999999
Q ss_pred HHhhhhccCCCccCHHHHHHHHHHHHHHHHHcCCCCceeeeccccccCCCCCeeeEEEEcHHHHHHHHhHHHHHHHHHHH
Q 005807 287 SEFKRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKFETLVNHLIERTKAPCK 366 (676)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~~~~~~~g~~~~~~~itr~~fe~~~~~~v~~i~~~i~ 366 (676)
++|..+++.++..+++.+.+|+..||++|+.|+......+.++.+....+|..++.+.|+|++|+++++|+++++.+.|.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~G~~~~~~~it~~~~~~~~~~~~~~i~~~i~ 321 (383)
T 1dkg_D 242 EEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIELLK 321 (383)
T ss_dssp HHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHSHHHHHHHHHHHH
T ss_pred HHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEecccccCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHHH
Confidence 99998888888888999999999999999999998888888877655333335667899999999999999999999999
Q ss_pred HHHHHcCCCcCCCcEEEEEcCCcCcHHHHHHHHHHhCCCCCCCCCcchhHhhHHHHHhhhcc
Q 005807 367 NCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIFGKSPSKGVNPDEAVALGAAIQGGILR 428 (676)
Q Consensus 367 ~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~fg~~~~~~~~p~~aVa~GAal~a~~l~ 428 (676)
++|+++++...+++.|+|+||+|++|+|++.|++.|+.++..+.||+++||+|||++|+.|+
T Consensus 322 ~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~ 383 (383)
T 1dkg_D 322 VALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLT 383 (383)
T ss_dssp HHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHTTTTC
T ss_pred HHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHhCCCCCCCcChHHHHHHHHHHHHHhhC
Confidence 99999998888999999999999999999999999998888899999999999999999764
No 8
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=4.7e-62 Score=528.72 Aligned_cols=371 Identities=53% Similarity=0.847 Sum_probs=346.5
Q ss_pred CCceEEEEcCCceEEEEEEECCceEEEeCCCCCcccceEEEEccCCcEEEcHHHHHhhhhCCCchHHHhhhhhcCCCCCH
Q 005807 52 GNDVIGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPANTLFGTKRLIGRRFNDA 131 (676)
Q Consensus 52 ~~~vvGID~GTt~s~va~~~~~~~~vi~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llg~~~~d~ 131 (676)
+..+||||||||||++|++.++.++++.|+.|++++||+|+|.+ ++++||+.|+.++..+|.++++++|+++|++++++
T Consensus 17 ~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~-~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~ 95 (394)
T 3qfu_A 17 YGTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTD-DERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDR 95 (394)
T ss_dssp CCSCEEEEECSSEEEEEEECSSCEEECCCTTSCSSEECCEEECS-SCEEESHHHHHTGGGCGGGEECCGGGTTTCCTTCH
T ss_pred CCCEEEEEeCcCcEEEEEEECCeeEEEECCCCCEeeceEEEEeC-CcEEecHHHHHhhHhCcccCHHHHHHHhCCCCCcH
Confidence 35799999999999999999999999999999999999999964 58999999999999999999999999999999999
Q ss_pred HHHHHhccCCeEEEeCCCCCeEEE--eC--CeeeCHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCCCCHHHHHHHHH
Q 005807 132 QTQKEMKMVPFKIVNAPNGDAWVE--AN--GQQYSPSQIGAFVLTKMKETAESYLGKSVSEAVITVPAYFNDAQRQATKD 207 (676)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~v~--~~--~~~~~~~ev~a~~L~~l~~~a~~~l~~~~~~~VITVPa~~~~~qr~~l~~ 207 (676)
.++...+.+||.+. +.++...+. .. .+.++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++
T Consensus 96 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~ 174 (394)
T 3qfu_A 96 SVQKDIKHLPFNVV-NKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKD 174 (394)
T ss_dssp HHHHHHTTCSSEEE-EETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHH
T ss_pred HHHHHhhcCCeEEE-cCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcCCCcceEEEEECCCCCHHHHHHHHH
Confidence 99999999999988 456665544 33 37899999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCeEEeeChhHHHHHhccccCCC-C-eEEEEeeCCceeEEEEEEEeCCeEEEEEecCCCCcchHHHHHHHHHHH
Q 005807 208 AGRIAGLDVQRIINEPTAAALSYGMNNKE-G-LIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFL 285 (676)
Q Consensus 208 Aa~~AGl~~~~li~Ep~AAal~y~~~~~~-~-~vlV~D~GgGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l~~~l 285 (676)
|++.|||+++.+++||+|||++|+..... + .++|||+||||+|++++++.++.++++++.++.++||.+||+.|.+++
T Consensus 175 a~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l 254 (394)
T 3qfu_A 175 AGTIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQL 254 (394)
T ss_dssp HHHHTTCEEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHH
T ss_pred HHHHcCCceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCChHHHHHHHHHHH
Confidence 99999999999999999999999877543 3 899999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhccCCCccCHHHHHHHHHHHHHHHHHcCCCCceeeeccccccCCCCCeeeEEEEcHHHHHHHHhHHHHHHHHHH
Q 005807 286 VSEFKRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKFETLVNHLIERTKAPC 365 (676)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~~~~~~~g~~~~~~~itr~~fe~~~~~~v~~i~~~i 365 (676)
.++|.++++.++..+++.+.+|+.+||++|+.|+......+.++.+..+ .++.+.++|++|+++++++++++.+.|
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~~----~~~~~~i~r~~~~~~~~~~~~~i~~~i 330 (394)
T 3qfu_A 255 IKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDG----IDLSETLTRAKFEELNLDLFKKTLKPV 330 (394)
T ss_dssp HHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEETT----EEEEEEEEHHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEEEEeccCC----ceeEEEEEHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999988888876654 778999999999999999999999999
Q ss_pred HHHHHHcCCCcCCCcEEEEEcCCcCcHHHHHHHHHHh-CCCCCCCCCcchhHhhHHHHHhhhcc
Q 005807 366 KNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSPSKGVNPDEAVALGAAIQGGILR 428 (676)
Q Consensus 366 ~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~f-g~~~~~~~~p~~aVa~GAal~a~~l~ 428 (676)
.++|+++++...+++.|+|+||+|++|+|++.|++.| +.++..+.||+++||.|||++|+.++
T Consensus 331 ~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 331 EKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp HHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHHC
T ss_pred HHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 9999999998889999999999999999999999999 78888899999999999999999764
No 9
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=1.1e-61 Score=528.07 Aligned_cols=369 Identities=29% Similarity=0.460 Sum_probs=333.8
Q ss_pred CceEEEEcCCceEEEEEEECCceEEEeCCCCCcccceEEEEccCCcEEEcHHHHHhhhhCCCchHHHhhhhhcCCCCCHH
Q 005807 53 NDVIGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPANTLFGTKRLIGRRFNDAQ 132 (676)
Q Consensus 53 ~~vvGID~GTt~s~va~~~~~~~~vi~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llg~~~~d~~ 132 (676)
+.+||||||||||++|++.++.++++.|+.|++++||+|+|. ++.++||..|+.+...+|.++++++|+++|+.++++.
T Consensus 13 ~~vvGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~-~~~~~~G~~A~~~~~~~~~~~i~~~K~llg~~~~~~~ 91 (409)
T 4gni_A 13 RVVIGITFGNSNSSIAHTVDDKAEVIANEDGDRQIPTILSYV-DGDEYYGQQAKNFLVRNPKNTVAYFRDILGQDFKSVD 91 (409)
T ss_dssp CCEEEEEECSSEEEEEEEETTEEEEECCTTSCSSEECEEEEE-TTEEEEHHHHHHHHHHCGGGEEESCGGGTTCCGGGCC
T ss_pred CcEEEEEcCCCeEEEEEEeCCceEEEECCCCCccCceEEEEC-CCcEEEcHHHHHhhHhChHhhHHHHHHHhCCCccchh
Confidence 579999999999999999999999999999999999999995 6789999999999999999999999999999988775
Q ss_pred HHHHhccCCeEEEeCCCCCeEEEe--------CCeeeCHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCCCCHHHHHH
Q 005807 133 TQKEMKMVPFKIVNAPNGDAWVEA--------NGQQYSPSQIGAFVLTKMKETAESYLGKSVSEAVITVPAYFNDAQRQA 204 (676)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~v~~--------~~~~~~~~ev~a~~L~~l~~~a~~~l~~~~~~~VITVPa~~~~~qr~~ 204 (676)
+.... +++.+. ..+|.+.+.. .++.++|+++++++|++|++.++.+++.++.++|||||++|++.||++
T Consensus 92 ~~~~~--~~~~~~-~~~g~~~~~v~~~~~~~~~~~~~~~~ev~~~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~ 168 (409)
T 4gni_A 92 PTHNH--ASAHPQ-EAGDNVVFTIKDKAEEDAEPSTLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNFTEKQKAA 168 (409)
T ss_dssp CGGGT--TSCCCE-EETTEEEEEECCSSCSSCCCEEEEHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHH
T ss_pred hhhhc--ccccee-cCCCcEEEEEecCCCCCCcceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHH
Confidence 55433 333332 2455555552 346899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCeEEeeChhHHHHHhccccC---CCC-eEEEEeeCCceeEEEEEEEeCCeEEEEEecCCCCcchHHHHHH
Q 005807 205 TKDAGRIAGLDVQRIINEPTAAALSYGMNN---KEG-LIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNA 280 (676)
Q Consensus 205 l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~---~~~-~vlV~D~GgGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~ 280 (676)
|++|++.|||+++.+++||+|||++|+... ..+ .++|||+||||+|++++++.++.++++++.++..+||.+||+.
T Consensus 169 ~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~ 248 (409)
T 4gni_A 169 LIAAAAAADLEVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDKV 248 (409)
T ss_dssp HHHHHHHTTCEEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHHH
T ss_pred HHHHHHHcCCCeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHHH
Confidence 999999999999999999999999998864 233 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhcc--CCCccCHHHHHHHHHHHHHHHHHcCCCCceeeeccccccCCCCCeeeEEEEcHHHHHHHHhHHH
Q 005807 281 LLEFLVSEFKRTER--IDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKFETLVNHLI 358 (676)
Q Consensus 281 l~~~l~~~~~~~~~--~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~~~~~~~g~~~~~~~itr~~fe~~~~~~v 358 (676)
|.+++..+|..+++ .+...+++.+.+|+.+||++|+.||......+.++.+..+ .++.+.|||++|+++++|++
T Consensus 249 i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~----~~~~~~itr~~~~~~~~~~~ 324 (409)
T 4gni_A 249 LIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVESLIDG----LDFASTINRLRYETIARTVF 324 (409)
T ss_dssp HHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEETT----EEEEEEEEHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCCCceEEEeecccCC----cceEEEeeHHHHHHHHHHHH
Confidence 99999999998888 7888899999999999999999999999999998877655 78899999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCcCCCcEEEEEcCCcCcHHHHHHHHHHhCCCC--------CCCCCcchhHhhHHHHHhhhccC
Q 005807 359 ERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIFGKSP--------SKGVNPDEAVALGAAIQGGILRG 429 (676)
Q Consensus 359 ~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~fg~~~--------~~~~~p~~aVa~GAal~a~~l~~ 429 (676)
+++..+|+++|+++++...+|+.|+||||+|++|+|++.|++.|+.++ ....||++|||+|||++|+....
T Consensus 325 ~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~~~ 403 (409)
T 4gni_A 325 EGFNRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQASLIQE 403 (409)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHHHHhhhhhh
Confidence 999999999999999988899999999999999999999999998652 57899999999999999997543
No 10
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=100.00 E-value=6.6e-43 Score=341.39 Aligned_cols=215 Identities=56% Similarity=0.819 Sum_probs=208.8
Q ss_pred EEEeecccccceeeeCCeEEEEEcCCCCCCCccceeeeecccCCceeEEEEeecCccccccccceeEEEEcCCCCCCCCC
Q 005807 435 LLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMAADNKALGEFELMGIPPAPRGI 514 (676)
Q Consensus 435 ~~~d~~~~s~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~ge~~~~~~~~~lg~~~l~~~~~~~~g~ 514 (676)
++.||+|+||||++.+|.|.+|||||++||++++++|+|..|||+.+.|.|||||+.++.+|..||+|.|.|+||+|+|.
T Consensus 2 ~l~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~Lg~f~l~gipp~p~G~ 81 (219)
T 4e81_A 2 LLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGM 81 (219)
T ss_dssp CCCCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTC
T ss_pred eEEEecCcEEEEEEeCCEEEEEEeCcCcccEeEEEEEEeCCCCCceEEEEEEEcCCcccccCCEEEEEEEeCCCCCCCCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeEEEEEEcCCccEEEEEEecCCCceeeEEeccCCCCCHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 005807 515 PQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSESEIEKMVKEAELHAQRDQERKTLIDIRNNADTTIYSIEKS 594 (676)
Q Consensus 515 ~~i~v~f~~d~~g~l~v~~~~~~t~~~~~~~i~~~~~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~le~~i~~~~~~ 594 (676)
++|+|+|++|.||+|+|++.+++||++..++|.+..+||++||++|++++++|+++|++.+++.+++|.+|+|+|.+++.
T Consensus 82 ~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~~~Ls~eeI~~m~~~a~~~~~eD~~~r~~~e~kn~le~~i~~~~~~ 161 (219)
T 4e81_A 82 PQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQ 161 (219)
T ss_dssp SCEEEEEEECTTCCEEEEEEETTTCCEEEEEECTTCSCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEeCCCCCEeeeeeccccCccceEeeeccccccHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999988889999999999999999999999999999999999999999999
Q ss_pred HhhhhcCCCHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHhc
Q 005807 595 LGEYREKIPGEVAKEIEDAVSDLRKAMAGEDIDGIKAKLDAANKAVSKIGQHMAG 649 (676)
Q Consensus 595 l~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~L~~~~~~i~~~~~~ 649 (676)
|+++.+++++++|++|.+.++++++||++++.+++++++++|++.+.++.++.|+
T Consensus 162 l~~~~~~l~~~~k~~i~~~l~~~~~~L~~~~~~~i~~~~~~L~~~~~~i~~~~~~ 216 (219)
T 4e81_A 162 VEEAGDKLPADDKTAIESALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQ 216 (219)
T ss_dssp HHHHGGGSCHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred HHHhhhhCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9888889999999999999999999999999999999999999999999999887
No 11
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=1.3e-41 Score=361.36 Aligned_cols=313 Identities=27% Similarity=0.356 Sum_probs=236.6
Q ss_pred CceEEEEcCCceEEEEEEECCceEEEeCCCCCcccceEEEEccC-Cc-EEEcHHHHHhhhhCCCchHHHhhhhhcCCCCC
Q 005807 53 NDVIGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQK-GE-LLVGTPAKRQAVTNPANTLFGTKRLIGRRFND 130 (676)
Q Consensus 53 ~~vvGID~GTt~s~va~~~~~~~~vi~~~~g~~~~PS~v~~~~~-~~-~~~G~~A~~~~~~~p~~~~~~~K~llg~~~~d 130 (676)
+.+||||||||||++++..++ .++ .+||+|+|+.+ ++ .++|++|+.....+|.++...
T Consensus 3 ~~~igIDlGT~~s~v~~~~~~--~~~-------~~PS~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~~~----------- 62 (344)
T 1jce_A 3 RKDIGIDLGTANTLVFLRGKG--IVV-------NEPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKAI----------- 62 (344)
T ss_dssp -CEEEEEECSSEEEEEETTTE--EEE-------EEESCEEEETTTCCEEEESHHHHTTTTCCCTTEEEE-----------
T ss_pred CceEEEEcCcCcEEEEECCCC--EEE-------eeCcEEEEecCCCcEEEEcHHHHHhcccCCCCeEEE-----------
Confidence 358999999999999875332 232 27999999766 45 479999998777777664210
Q ss_pred HHHHHHhccCCeEEEeCCCCCeEEEeCCeeeCHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCCCCHHHHHHHHHHHH
Q 005807 131 AQTQKEMKMVPFKIVNAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGR 210 (676)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ev~a~~L~~l~~~a~~~l~~~~~~~VITVPa~~~~~qr~~l~~Aa~ 210 (676)
.|++ +|. + . ....++++.+++|++++.. .+++ ...+|||||++|++.||+++++|++
T Consensus 63 ---------~p~~-----~g~--i--~-~~~~~~~i~~~~l~~~~~~--~~~~--~~~~vitvP~~~~~~~r~~~~~a~~ 119 (344)
T 1jce_A 63 ---------RPMR-----DGV--I--A-DYTVALVMLRYFINKAKGG--MNLF--KPRVVIGVPIGITDVERRAILDAGL 119 (344)
T ss_dssp ---------CCEE-----TTE--E--S-SHHHHHHHHHHHHHHHHTS--CCSC--CCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred ---------ecCC-----CCe--e--C-ChHHHHHHHHHHHHHHhhc--cccC--CCeEEEEECCCCCHHHHHHHHHHHH
Confidence 1211 110 0 0 0012445555555444332 1233 3789999999999999999999999
Q ss_pred HcCCCeEEeeChhHHHHHhccccCCCC-eEEEEeeCCceeEEEEEEEeCCeEEEEEecCCCCcchHHHHHHHHHHHHHHh
Q 005807 211 IAGLDVQRIINEPTAAALSYGMNNKEG-LIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEF 289 (676)
Q Consensus 211 ~AGl~~~~li~Ep~AAal~y~~~~~~~-~vlV~D~GgGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l~~~l~~~~ 289 (676)
.||++++.+++||+|||++|+.....+ .++|||+||||||+++++..... ..++..+||.+||+.|.+++.+++
T Consensus 120 ~aG~~~~~li~ep~Aaa~~~~~~~~~~~~~lVvDiGggttdvsv~~~~~~~-----~~~~~~lGG~~id~~l~~~l~~~~ 194 (344)
T 1jce_A 120 EAGASKVFLIEEPMAAAIGSNLNVEEPSGNMVVDIGGGTTEVAVISLGSIV-----TWESIRIAGDEMDEAIVQYVRETY 194 (344)
T ss_dssp HTTCSEEEEEEHHHHHHHHTTCCTTSSSCEEEEEECSSCEEEEEEETTEEE-----EEEEESCSHHHHHHHHHHHHHHHH
T ss_pred HcCCCeEeccCCHHHHHHhcCCCCCCCceEEEEEeCCCeEEEEEEEcCCEE-----eeCCCCccChhHHHHHHHHHHHHh
Confidence 999999999999999999998765544 89999999999999998764322 245678999999999999998776
Q ss_pred hhhccCCCccCHHHHHHHHHHHHHHHHHcCCCCc------eeeeccccccCCCCCeeeEEEEcHHHHHHHHhHHHHHHHH
Q 005807 290 KRTERIDLSQDKLALQRLRESAEKAKIELSSTSQ------TEINLPFITADASGAKHLNITLTRSKFETLVNHLIERTKA 363 (676)
Q Consensus 290 ~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~------~~~~i~~~~~~~~g~~~~~~~itr~~fe~~~~~~v~~i~~ 363 (676)
.. ++. ...||++|+.|+.... ..+.++.. +..+..+..+.|+|++|+++++|.++++.+
T Consensus 195 ~~----~~~---------~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~--~~~~g~~~~~~i~~~~~~~~~~~~~~~i~~ 259 (344)
T 1jce_A 195 RV----AIG---------ERTAERVKIEIGNVFPSKENDELETTVSGI--DLSTGLPRKLTLKGGEVREALRSVVVAIVE 259 (344)
T ss_dssp CE----ECC---------HHHHHHHHHHHCBCSCCHHHHHCEEEEEEE--ETTTTEEEEEEEEHHHHHHHTHHHHHHHHH
T ss_pred Cc----ccC---------HHHHHHHHHHHhccCccccCCcceEEEecc--ccCCCCceeEEEeHHHHHHHHHHHHHHHHH
Confidence 42 111 3679999999997643 23444321 111125678999999999999999999999
Q ss_pred HHHHHHHHcCCC--cCCC-cEEEEEcCCcCcHHHHHHHHHHhCCCCCCCCCcchhHhhHHHHHhhhcc
Q 005807 364 PCKNCLKDANIT--IKDV-DEVLLVGGMTRVPKVQEIVTEIFGKSPSKGVNPDEAVALGAAIQGGILR 428 (676)
Q Consensus 364 ~i~~~l~~~~~~--~~~i-~~ViLvGG~s~~p~i~~~l~~~fg~~~~~~~~p~~aVa~GAal~a~~l~ 428 (676)
.|.++|++++.. ...+ +.|+|+||+|++|+|++.|++.|+.++....||+++||.||++++..++
T Consensus 260 ~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~ 327 (344)
T 1jce_A 260 SVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKGAGMVLDKVN 327 (344)
T ss_dssp HHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHHSSCEEECSSTTTHHHHHHHHGGGCHH
T ss_pred HHHHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHHCCCccccCChHHHHHHHHHHHHhChH
Confidence 999999987532 1224 6899999999999999999999998888889999999999999998654
No 12
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=100.00 E-value=2.5e-39 Score=319.61 Aligned_cols=215 Identities=36% Similarity=0.607 Sum_probs=208.4
Q ss_pred EeecccccceeeeCCeEEEEEcCCCCCCCccceeeeecccCCceeEEEEeecCccccccccceeEEEEcCCCCCCCCCCe
Q 005807 437 LDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMAADNKALGEFELMGIPPAPRGIPQ 516 (676)
Q Consensus 437 ~d~~~~s~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~ge~~~~~~~~~lg~~~l~~~~~~~~g~~~ 516 (676)
.|++|+||||++.+|.|.+|||||++||++++++|++..|+|+.+.|+||||++.++.+|..||+|.|.|+||+|+|.++
T Consensus 1 ~Dv~p~slGie~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~Lg~f~l~gi~~~p~G~~~ 80 (227)
T 1u00_A 1 MDVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRSLARFALRGIPALPAGGAH 80 (227)
T ss_dssp CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEECSSTTCCCEEEEEEECSSSBGGGSEEEEEEEECCCCCCSTTCSC
T ss_pred CCcccceEEEEEeCCEEEEEEeCcCccCceEEEEEEecCCCceEEEEEEEecCCccCCCCCEEEEEEEeCCCCCCCCceE
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEcCCccEEEEEEecCCCceeeEEeccCCCCCHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 005807 517 IEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSESEIEKMVKEAELHAQRDQERKTLIDIRNNADTTIYSIEKSLG 596 (676)
Q Consensus 517 i~v~f~~d~~g~l~v~~~~~~t~~~~~~~i~~~~~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~le~~i~~~~~~l~ 596 (676)
|+|+|++|.||+|+|++.++.||++..++|....+||+++|++|++++++|+++|++++++.+++|.+|+|+|++++.|.
T Consensus 81 I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~~~Ls~eei~~~~~~~~~~~~~D~~~~e~~e~kn~le~~i~~~~~~l~ 160 (227)
T 1u00_A 81 IRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYGLTDSEIASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGALA 160 (227)
T ss_dssp EEEEEEECTTCCEEEEEEETTTCCEEEEEECCCSCCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECCCCcEEEEeecccccccceEEEEeccCCCHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998888999999999999999999999999999999999999999999998
Q ss_pred hhhcCCCHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHhcCC
Q 005807 597 EYREKIPGEVAKEIEDAVSDLRKAMAGEDIDGIKAKLDAANKAVSKIGQHMAGGS 651 (676)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~L~~~~~~i~~~~~~~~ 651 (676)
++.+++++++|+++.+.|+++++||++++.++|++++++|++.+.++..++|+++
T Consensus 161 ~~~~~~~~~~k~~i~~~l~~~~~wl~~~d~~~~~~~~~~L~~~~~~i~~r~~~~~ 215 (227)
T 1u00_A 161 ADAALLSAAERQVIDDAAAHLSEVAQGDDVDAIEQAIKNVDKQTQDFAARRMDQS 215 (227)
T ss_dssp HHGGGSCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhccCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888999999999999999999999998899999999999999999999988644
No 13
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.4e-35 Score=274.45 Aligned_cols=164 Identities=70% Similarity=0.973 Sum_probs=154.2
Q ss_pred ceeEEEeecccccceeeeCCeEEEEEcCCCCCCCccceeeeecccCCceeEEEEeecCccccccccceeEEEEcCCCCCC
Q 005807 432 KELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMAADNKALGEFELMGIPPAP 511 (676)
Q Consensus 432 ~~~~~~d~~~~s~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~ge~~~~~~~~~lg~~~l~~~~~~~ 511 (676)
..+.+.|++|+||||++.+|.|.+|||||++||++++++|++..|||+.+.|.|||||+.++.+|.+||+|.|.++||+|
T Consensus 18 ~~f~l~DV~P~slGie~~gg~~~~lI~rnt~iP~~k~~~f~T~~DnQ~~v~I~VyqGE~~~~~dn~~LG~f~l~gipp~p 97 (182)
T 3n8e_A 18 LYFQSMDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDNKLLGQFTLIGIPPAP 97 (182)
T ss_dssp ------CBCSSCEEEECTTSBEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCC
T ss_pred CCEEEEEecCCEEEEEEeCCEEEEEEeCCCccCEEEEEEEEECCCCccEEEEEEEEcCccccccCceEEEEEEcCCCCCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeeEEEEEEcCCccEEEEEEecCCCceeeEEeccCCCCCHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHH
Q 005807 512 RGIPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSESEIEKMVKEAELHAQRDQERKTLIDIRNNADTTIYSI 591 (676)
Q Consensus 512 ~g~~~i~v~f~~d~~g~l~v~~~~~~t~~~~~~~i~~~~~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~le~~i~~~ 591 (676)
+|.++|+|+|++|.||+|+|+|.+++||++..++|....+||++||++|++++++|+++|++.+++.++||+||+|+|++
T Consensus 98 ~G~~~IeVtf~iD~nGiL~VsA~d~~tg~~~~i~I~~~~~Ls~eei~~mi~~a~~~~~eD~~~~~~~e~kn~le~~iy~~ 177 (182)
T 3n8e_A 98 RGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSSGGLSKDDIENMVKNAEKYAEEDRRKKERVEAVNMAEGIIHDT 177 (182)
T ss_dssp TTCSCEEEEEEECTTCCEEEEEEETTTCCEEEEEESCCCCCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCeeEEEEEEEecCCEEEEEEEEcCCCCEeeEEEecCccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988889999999999999999999999999999999999999998
Q ss_pred HHHH
Q 005807 592 EKSL 595 (676)
Q Consensus 592 ~~~l 595 (676)
++.|
T Consensus 178 ~~~l 181 (182)
T 3n8e_A 178 ETKM 181 (182)
T ss_dssp SCCC
T ss_pred HHhh
Confidence 7654
No 14
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=99.98 E-value=2.7e-32 Score=251.00 Aligned_cols=150 Identities=60% Similarity=0.895 Sum_probs=145.0
Q ss_pred EEeecccccceeeeCCeEEEEEcCCCCCCCccceeeeecccCCceeEEEEeecCccccccccceeEEEEcCCCCCCCCCC
Q 005807 436 LLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMAADNKALGEFELMGIPPAPRGIP 515 (676)
Q Consensus 436 ~~d~~~~s~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~ge~~~~~~~~~lg~~~l~~~~~~~~g~~ 515 (676)
+.|++|+|||+++.+|.|.+|||||++||++++++|++..|+|+.+.|.|||||+..+.+|.+||+|.|.|+||+|+|.+
T Consensus 2 ~~Dv~p~slGi~~~gg~~~~lI~rnt~iP~~k~~~f~t~~d~Q~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3h0x_A 2 NADVNALTLGIETTGGVMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGERAMSKDNNLLGKFELTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ccceeccEEEEEEcCCEEEEEEECcCccCEEEEEEEEeCCCCcceeeeeEEEcCccccccCcEEEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEcCCccEEEEEEecCCCceeeEEeccC-CCCCHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHH
Q 005807 516 QIEVTFDIDANGIVTVSAKDKATGKEQQITIRSS-GGLSESEIEKMVKEAELHAQRDQERKTLIDIRNNAD 585 (676)
Q Consensus 516 ~i~v~f~~d~~g~l~v~~~~~~t~~~~~~~i~~~-~~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~le 585 (676)
+|+|+|++|.||+|+|++.|++||++..++|... ++||++||++|++++++|+++|++.+++.++||.||
T Consensus 82 ~I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~~~~ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3h0x_A 82 QIEVTFALDANGILKVSATDKGTGKSESITITNDKGRLTQEEIDRMVEEAEKFASEDASIKAKVESRNKLE 152 (152)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECCTTCCCHHHHHHHHHHHHHTHHHHHHHHHHHHCSCCCC
T ss_pred eEEEEEEEcCCCEEEEEEEEcCCCcEeEEEEecCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999986 789999999999999999999999999999999875
No 15
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=99.98 E-value=1.6e-32 Score=251.90 Aligned_cols=150 Identities=57% Similarity=0.907 Sum_probs=141.4
Q ss_pred EEeecccccceeeeCCeEEEEEcCCCCCCCccceeeeecccCCceeEEEEeecCccccccccceeEEEEcCCCCCCCCCC
Q 005807 436 LLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMAADNKALGEFELMGIPPAPRGIP 515 (676)
Q Consensus 436 ~~d~~~~s~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~ge~~~~~~~~~lg~~~l~~~~~~~~g~~ 515 (676)
+.|++|+|||+++.+|.|.+|||||++||++++++|++..|+|+.+.|.|||||+..+.+|.+||+|.|.|+||+|+|.+
T Consensus 2 ~~Dv~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3dob_A 2 NADVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVP 81 (152)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCC
T ss_pred ceeeecceEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCceEEEEEEEEcCccccccCceeEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEcCCccEEEEEEecCCCceeeEEeccC-CCCCHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHH
Q 005807 516 QIEVTFDIDANGIVTVSAKDKATGKEQQITIRSS-GGLSESEIEKMVKEAELHAQRDQERKTLIDIRNNAD 585 (676)
Q Consensus 516 ~i~v~f~~d~~g~l~v~~~~~~t~~~~~~~i~~~-~~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~le 585 (676)
+|+|+|++|.||+|+|+|.|++||++..++|.+. +.||++||++|++++++|+++|++.+++.++||.||
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~~~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3dob_A 82 QIEVTFNIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSDIDRMVHEAKQFEKEDGEQRERVQARNQLE 152 (152)
T ss_dssp CEEEEEEECTTCCEEEEEEETTTCCEEEEEECCC----CHHHHHHHHHHHHHTHHHHHHHHHTCCCCSEEC
T ss_pred eEEEEEEeCCCCeEEEEEEEcCCCCEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999986 459999999999999999999999999999988764
No 16
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=99.97 E-value=9.9e-33 Score=253.06 Aligned_cols=150 Identities=73% Similarity=1.063 Sum_probs=143.4
Q ss_pred EEeecccccceeeeCCeEEEEEcCCCCCCCccceeeeecccCCceeEEEEeecCccccccccceeEEEEcCCCCCCCCCC
Q 005807 436 LLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMAADNKALGEFELMGIPPAPRGIP 515 (676)
Q Consensus 436 ~~d~~~~s~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~ge~~~~~~~~~lg~~~l~~~~~~~~g~~ 515 (676)
+.|++|+|||+++.+|.|.+|||||++||++++++|++..|||+.+.|.|||||+..+.+|.+||+|.|.++||+|+|.+
T Consensus 2 ~~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (151)
T 3dqg_A 2 NADVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFSLVGIPPAPRGVP 81 (151)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCS
T ss_pred cceeeeeEEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCcceEEEEEEEcCCcccccCcEEEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEcCCccEEEEEEecCCCceeeEEeccCCCCCHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHH
Q 005807 516 QIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSESEIEKMVKEAELHAQRDQERKTLIDIRNNAD 585 (676)
Q Consensus 516 ~i~v~f~~d~~g~l~v~~~~~~t~~~~~~~i~~~~~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~le 585 (676)
+|+|+|++|.||+|+|+|.|+.||++..++|.+..+||++||++|++++++|+++|++.+++.++||+||
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~~e 151 (151)
T 3dqg_A 82 QVEVTFDIDANGIVNVSARDRGTGKEQQIVIQSSGGLSKDQIENMIKEAEKNAAEDAKRKELVEVINQAE 151 (151)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECSSSSCHHHHHHHHHHHHHHHHHHTTCCCEEECBCCCC
T ss_pred EEEEEEEeccCcEEEEEEEEccCCCEeEEEEecCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999988899999999999999999999999998888888754
No 17
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=99.96 E-value=9.3e-30 Score=235.67 Aligned_cols=150 Identities=56% Similarity=0.902 Sum_probs=143.8
Q ss_pred EEeecccccceeeeCCeEEEEEcCCCCCCCccceeeeecccCCceeEEEEeecCccccccccceeEEEEcCCCCCCCCCC
Q 005807 436 LLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMAADNKALGEFELMGIPPAPRGIP 515 (676)
Q Consensus 436 ~~d~~~~s~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~ge~~~~~~~~~lg~~~l~~~~~~~~g~~ 515 (676)
+.|++|+||||++.+|.|.+||+||++||++++++|++..|||+.+.|.||||++.++.+|..||+|.|.++||.|+|.+
T Consensus 2 v~Dv~p~slGi~~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~lg~~~l~gipp~p~G~~ 81 (152)
T 2op6_A 2 NADVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ceEeecccEEEEEeCCEEEEEEeCCCcccEeEEEEEEeCCCCCcEEEEEEEEeCCccCccCCEeEEEEEECCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEcCCccEEEEEEecCCCceeeEEeccC-CCCCHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHH
Q 005807 516 QIEVTFDIDANGIVTVSAKDKATGKEQQITIRSS-GGLSESEIEKMVKEAELHAQRDQERKTLIDIRNNAD 585 (676)
Q Consensus 516 ~i~v~f~~d~~g~l~v~~~~~~t~~~~~~~i~~~-~~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~le 585 (676)
+|+|+|++|.||+|+|++.+..||++..++|... ++||++||++|++++++|+.+|++.+++.++||.||
T Consensus 82 ~I~V~f~id~nGiL~V~a~d~~tg~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~~kn~~e 152 (152)
T 2op6_A 82 QIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPEDIERMINDADKFAADDQAQKEKVESRNELE 152 (152)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTCCEEEEEECSSSSCCCHHHHHHHHHHHHHTHHHHHHHHHHSCCCSEEC
T ss_pred eEEEEEEECCCcEEEEEEEEecCCcEEEEEeeccccCCCHHHHHHHHHHHHHhHhccHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999876 579999999999999999999999999999998764
No 18
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.95 E-value=8.4e-29 Score=261.72 Aligned_cols=224 Identities=17% Similarity=0.136 Sum_probs=168.9
Q ss_pred eeCHHHHHHHHHHHHHHHHHHHhCCCCCeEE--EEeCCCCCHHHHHHHHHHHHHc--------C------CCeEEeeChh
Q 005807 160 QYSPSQIGAFVLTKMKETAESYLGKSVSEAV--ITVPAYFNDAQRQATKDAGRIA--------G------LDVQRIINEP 223 (676)
Q Consensus 160 ~~~~~ev~a~~L~~l~~~a~~~l~~~~~~~V--ITVPa~~~~~qr~~l~~Aa~~A--------G------l~~~~li~Ep 223 (676)
.+.+++..++++..|+..++...+.+ .++| |+||++|++.||+++++++..+ | +..+++++||
T Consensus 94 ~~~~~~~~~ll~~~l~~~~~~~~~~~-~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep 172 (346)
T 2fsj_A 94 RLASKEAFPLIAAALWESGIHNDGSP-VDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQG 172 (346)
T ss_dssp CTTSTTTHHHHHHHHHHHCCCC---C-EEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETT
T ss_pred cccChhHHHHHHHHHHHhhhccCCCc-eEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccH
Confidence 34557777778877776653223333 5799 9999999999999999997776 4 3568899999
Q ss_pred HHHHHhc--cccCC-C-CeEEEEeeCCceeEEEEEEEeCCeEEEEEecCCCCcchHHHHHHHHHHHHHHhhhhccC--CC
Q 005807 224 TAAALSY--GMNNK-E-GLIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEFKRTERI--DL 297 (676)
Q Consensus 224 ~AAal~y--~~~~~-~-~~vlV~D~GgGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l~~~l~~~~~~~~~~--~~ 297 (676)
+|||++| ..... . .+++|||+||||||++++++.++. .+.+++++..+||++|++.|.+++.+++. . .+
T Consensus 173 ~AAa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~-~v~~~s~~~~lGg~~i~~~I~~~i~~~~g----~~~~i 247 (346)
T 2fsj_A 173 VGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDME-PVVELSFSLQIGVGDAISALSRKIAKETG----FVVPF 247 (346)
T ss_dssp HHHHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTE-ECGGGCEEESCCHHHHHHHHHHHHHHHHC----CCCCH
T ss_pred HHHHHHhhccccccccCCcEEEEECCCCcEEEEEEEecCCE-EEeecCCCcchhHHHHHHHHHHHHHHHhC----CCcCC
Confidence 9999987 21112 2 489999999999999999887776 55555678899999999999988777664 2 21
Q ss_pred ccCHHHHHHHHHHHHHHHHHcCCCCceeeeccccccCCCCCeeeEEEEcHHHH-HHHHhHHHHHHHHHHHHHHHHcCCCc
Q 005807 298 SQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKF-ETLVNHLIERTKAPCKNCLKDANITI 376 (676)
Q Consensus 298 ~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~~~~~~~g~~~~~~~itr~~f-e~~~~~~v~~i~~~i~~~l~~~~~~~ 376 (676)
. ...+| ....+.+. | . .++++++ +++++++++++.+.|++.|+++ .
T Consensus 248 ~---------~~~~e---------~~~~~~~~-------g-~----~~~~~~i~~~~i~~~~~~i~~~i~~~l~~~---~ 294 (346)
T 2fsj_A 248 D---------LAQEA---------LSHPVMFR-------Q-K----QVGGPEVSGPILEDLANRIIENIRLNLRGE---V 294 (346)
T ss_dssp H---------HHHHH---------TTSCEEET-------T-E----EECSHHHHHHHHHHHHHHHHHHHHHHHGGG---G
T ss_pred C---------HHHHh---------cCCeEeEC-------C-c----cCCHHHHHHHHHHHHHHHHHHHHHHHHHhh---h
Confidence 1 11122 01112211 1 2 2558999 9999999999999999999876 4
Q ss_pred CCCcEEEEEcCCcCcHHHHHHHHHHhCCCCCC---CCCcchhHhhHHHHHhh
Q 005807 377 KDVDEVLLVGGMTRVPKVQEIVTEIFGKSPSK---GVNPDEAVALGAAIQGG 425 (676)
Q Consensus 377 ~~i~~ViLvGG~s~~p~i~~~l~~~fg~~~~~---~~~p~~aVa~GAal~a~ 425 (676)
.+++.|+|+||+|++ +++.|++.|+. +.. ..||++|+|.|+..++.
T Consensus 295 ~~i~~IvL~GGga~l--l~~~l~~~~~~-~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 295 DRVTSLIPVGGGSNL--IGDRFEEIAPG-TLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp GGEEEEEEESTTHHH--HGGGGGGGSTT-CBCCCCTTTTTTHHHHHHHHHHH
T ss_pred hcccEEEEECCcHHH--HHHHHHHHCcC-cEEeccCCCcHHHHHHHHHHHHh
Confidence 568999999999999 99999999974 334 67999999999998765
No 19
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.95 E-value=1.8e-28 Score=263.36 Aligned_cols=316 Identities=17% Similarity=0.208 Sum_probs=207.5
Q ss_pred CCceEEEEcCCceEEEEEEECCceEEEeCCCCCcccceEEEEccCCcEEEcHHHHHhhhhCCCchHHHhhhhhcCCCCCH
Q 005807 52 GNDVIGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPANTLFGTKRLIGRRFNDA 131 (676)
Q Consensus 52 ~~~vvGID~GTt~s~va~~~~~~~~vi~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llg~~~~d~ 131 (676)
...++|||+|||+++++++.++.+.+. ..|...+|+... ++....+++.+...+|+++++.-.
T Consensus 12 ~~~~vgiDiGt~~i~~~~~~~~~~~i~--~~g~~~~ps~~~-------------~~g~i~d~~~~~~~ik~~~~~~~~-- 74 (377)
T 2ych_A 12 RVEALGLEIGASALKLVEVSGNPPALK--ALASRPTPPGLL-------------MEGMVAEPAALAQEIKELLLEART-- 74 (377)
T ss_dssp CCCCEEEEECSSEEEEEEEETTTTEEE--EEEEEECCTTSE-------------ETTEESCHHHHHHHHHHHHHHHTC--
T ss_pred CCceEEEEeCCCeEEEEEEeCCceEEE--EEEeEECCCCcc-------------cCCCcCCHHHHHHHHHHHHHHcCC--
Confidence 346899999999999999876665552 234445555322 222445777888899998875100
Q ss_pred HHHHHhccCCeEEEeCCCCCeEE-EeCCeeeCHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCCCCHHH---------
Q 005807 132 QTQKEMKMVPFKIVNAPNGDAWV-EANGQQYSPSQIGAFVLTKMKETAESYLGKSVSEAVITVPAYFNDAQ--------- 201 (676)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~ev~a~~L~~l~~~a~~~l~~~~~~~VITVPa~~~~~q--------- 201 (676)
..+.. .+..+...... ......++++++... ++..++++++.++.+++|.+|. .+.+
T Consensus 75 ----~~~~v---~~~i~~~~~~~~~~~~~~v~~~el~~~----i~~ea~~~~~~~~~~~vid~~~--~~~~~~~~~~~~~ 141 (377)
T 2ych_A 75 ----RKRYV---VTALSNLAVILRPIQVPKMPLKEMEEA----VRWEAERYIPFPIDEVVLDFAP--LTPLSEVQEGEQV 141 (377)
T ss_dssp ----CCCEE---EEEECGGGCEEEEEEEECCCHHHHHHH----HHHHHGGGCSSCC-CEEEEEEE--SSCGGGSCTTSEE
T ss_pred ----CcceE---EEEecCCcEEEEEEECCCCCHHHHHHH----HHHHHhhcCCCChhHceEEEEE--eCCCCCCCCccee
Confidence 00000 11112111111 111245788887653 3457788899999999999983 3222
Q ss_pred -----------HHHHHHHHHHcCCCeEEeeChhHHHHHhccccC---CCCeEEEEeeCCceeEEEEEEEeCCeEEEEEec
Q 005807 202 -----------RQATKDAGRIAGLDVQRIINEPTAAALSYGMNN---KEGLIAVFDLGGGTFDVSVLEISNGVFEVKATN 267 (676)
Q Consensus 202 -----------r~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~---~~~~vlV~D~GgGT~Dvsv~~~~~~~~~v~~~~ 267 (676)
.+.+++|++.|||++..++.||+|||++|+... ....++|+|+||||||+++++ .+.+. ..
T Consensus 142 ~v~~va~~~~~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~--~g~~~---~~ 216 (377)
T 2ych_A 142 QVMVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLR--GDKPL---AV 216 (377)
T ss_dssp EEEEEEEEHHHHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEE--TTEEE---EE
T ss_pred EEEEEEecHHHHHHHHHHHHHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEE--CCEEE---EE
Confidence 388999999999999999999999999986532 223799999999999999986 34332 24
Q ss_pred CCCCcchHHHHHHHHHHHHHHhhhhccCCCccCHHHHHHHHHHHHHHHHHcCCCCceeeeccccccCCCCCeeeEEEEcH
Q 005807 268 GDTFLGGEDFDNALLEFLVSEFKRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTR 347 (676)
Q Consensus 268 g~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~~~~~~~g~~~~~~~itr 347 (676)
++..+||.+||+.|.+.+ +.+ ...||++|+.++............... ......+++
T Consensus 217 ~~~~~GG~~i~~~i~~~~--------~~~-----------~~~aE~~K~~~~~~~~~~~~~~~~i~~----~~~~~~i~~ 273 (377)
T 2ych_A 217 RVLTLSGKDFTEAIARSF--------NLD-----------LLAAEEVKRTYGMATLPTEDEELLLDF----DAERERYSP 273 (377)
T ss_dssp EEESCSHHHHHHHHHHHT--------TCC-----------HHHHHHHHHHTC----------------------------
T ss_pred EeeechHHHHHHHHHHHh--------CCC-----------HHHHHHHHhhccccccccccccccccc----ccccccCCH
Confidence 567899999999988732 221 357899999988643221110000000 113457899
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHc--CCCcCCCcEEEEEcCCcCcHHHHHHHHHHhCCCCCCC----------------
Q 005807 348 SKFETLVNHLIERTKAPCKNCLKDA--NITIKDVDEVLLVGGMTRVPKVQEIVTEIFGKSPSKG---------------- 409 (676)
Q Consensus 348 ~~fe~~~~~~v~~i~~~i~~~l~~~--~~~~~~i~~ViLvGG~s~~p~i~~~l~~~fg~~~~~~---------------- 409 (676)
++|++++++.++++...|++.|+.. +.....++.|+|+||+|++|.+++.+++.|+.++...
T Consensus 274 ~~~~~~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~~~v~~~~P~~~v~~~~~~~~~~ 353 (377)
T 2ych_A 274 GRIYDAIRPVLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLGVNLEPVNPWEAVAVDPKRFESE 353 (377)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHTSEEEECCGGGGSBCCTTTSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhCCCeEecCchhhcccCcccCCHH
Confidence 9999999999999999999999853 4555678999999999999999999999998643221
Q ss_pred ----CCcchhHhhHHHHHhh
Q 005807 410 ----VNPDEAVALGAAIQGG 425 (676)
Q Consensus 410 ----~~p~~aVa~GAal~a~ 425 (676)
.+|..++|.|+|+++.
T Consensus 354 ~l~~~~p~~a~a~Glal~~~ 373 (377)
T 2ych_A 354 QLQEIGPEFAVALGLALRGV 373 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhhhHHHHHHHHHHHcCC
Confidence 2345677888888765
No 20
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.95 E-value=3e-26 Score=234.67 Aligned_cols=203 Identities=26% Similarity=0.341 Sum_probs=174.1
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCeEEeeChhHHHHHhccccCCCCeEEEEe
Q 005807 164 SQIGAFVLTKMKETAESYLGKSVSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGMNNKEGLIAVFD 243 (676)
Q Consensus 164 ~ev~a~~L~~l~~~a~~~l~~~~~~~VITVPa~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~vlV~D 243 (676)
.+....+|+++++.++.+.+.....+++|+|++|+..+|++++++++.+|+++..++.||+|++++|+.. ..+|+|
T Consensus 70 ~~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~----~~~viD 145 (272)
T 3h1q_A 70 YIGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN----DGIVVD 145 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCS----SEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCC----CEEEEE
Confidence 3556788899999998888888899999999999999999999999999999999999999999998764 359999
Q ss_pred eCCceeEEEEEEEeCCeEEEEEecCCCCcchHHHHHHHHHHHHHHhhhhccCCCccCHHHHHHHHHHHHHHHHHcCCCCc
Q 005807 244 LGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEFKRTERIDLSQDKLALQRLRESAEKAKIELSSTSQ 323 (676)
Q Consensus 244 ~GgGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~ 323 (676)
+||||++++++. ++... ......+||.+||+.+.+++.-. ...+|++|+.++
T Consensus 146 iGggst~~~~~~--~g~~~---~~~~~~~Gg~~~~~~l~~~l~~~-------------------~~~ae~~k~~~~---- 197 (272)
T 3h1q_A 146 IGGGTTGIAVIE--KGKIT---ATFDEPTGGTHLSLVLAGSYKIP-------------------FEEAETIKKDFS---- 197 (272)
T ss_dssp ECSSCEEEEEEE--TTEEE---EECCBSCCHHHHHHHHHHHHTCC-------------------HHHHHHHHHSST----
T ss_pred ECCCcEEEEEEE--CCEEE---EEecCCCcHHHHHHHHHHHhCCC-------------------HHHHHHHHHhcC----
Confidence 999999999976 44332 24668999999999998876411 257888988765
Q ss_pred eeeeccccccCCCCCeeeEEEEcHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcCCCcEEEEEcCCcCcHHHHHHHHHHhC
Q 005807 324 TEINLPFITADASGAKHLNITLTRSKFETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIFG 403 (676)
Q Consensus 324 ~~~~i~~~~~~~~g~~~~~~~itr~~fe~~~~~~v~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~fg 403 (676)
+++++++++.++++++...+.+.++..+ +++.|+|+||++++|++++.+++.|+
T Consensus 198 ----------------------~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~~~~l~~~l~~~l~ 251 (272)
T 3h1q_A 198 ----------------------RHREIMRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVGGTAYLTGFSEEFSRFLG 251 (272)
T ss_dssp ----------------------THHHHHHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEESGGGGSTTHHHHHHHHHS
T ss_pred ----------------------CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCccchhhHHHHHHHHhC
Confidence 5789999999999999999999998754 36899999999999999999999999
Q ss_pred CCCCCCCCcchhHhhHHHHHh
Q 005807 404 KSPSKGVNPDEAVALGAAIQG 424 (676)
Q Consensus 404 ~~~~~~~~p~~aVa~GAal~a 424 (676)
.++..+.+|++++|.|||++|
T Consensus 252 ~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 252 KEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp SCCBCCSSGGGHHHHHHHTTC
T ss_pred CCccccCChHHHHHHHHHhcC
Confidence 988889999999999999875
No 21
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.94 E-value=3.7e-26 Score=248.68 Aligned_cols=308 Identities=17% Similarity=0.180 Sum_probs=205.5
Q ss_pred CCceEEEEcCCceEEEEEEECCceEEEeCCCCCcccceEEEEccCC-----------------cEEEcHHHHHhhhhCCC
Q 005807 52 GNDVIGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQKG-----------------ELLVGTPAKRQAVTNPA 114 (676)
Q Consensus 52 ~~~vvGID~GTt~s~va~~~~~~~~vi~~~~g~~~~PS~v~~~~~~-----------------~~~~G~~A~~~~~~~p~ 114 (676)
....|+||+||+++++++..++.|.++ +||+|+...+. ..++|++|... +
T Consensus 4 ~~~~ivID~Gs~~~k~G~~~~~~p~~~--------~Ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~a~~~----~- 70 (418)
T 1k8k_A 4 RLPACVVDCGTGYTKLGYAGNTEPQFI--------IPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEK----P- 70 (418)
T ss_dssp CSCCEEEEECSSEEEEEETTCSSCSEE--------EESCEEECC-----------CCCTTGGGCEEEGGGGTSC----T-
T ss_pred CCCeEEEECCCCeEEEeeCCCCCCCCc--------CCceEEEECcccccccccccccccccccCeEEChHHHhc----C-
Confidence 346899999999999999766566543 47777764321 25566665432 1
Q ss_pred chHHHhhhhhcCCCCCHHHHHHhccCCeEEEeCCCCCeEEEeCCeeeCHHHHHHHHHHHHHHHHHHHhCCC--CCeEEEE
Q 005807 115 NTLFGTKRLIGRRFNDAQTQKEMKMVPFKIVNAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKS--VSEAVIT 192 (676)
Q Consensus 115 ~~~~~~K~llg~~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ev~a~~L~~l~~~a~~~l~~~--~~~~VIT 192 (676)
+ ..+++ |+ .+|...+.+ ....++.++.. +.++.. ...++||
T Consensus 71 ~--~~~~~------------------pi-------------~~G~i~d~d-~~e~i~~~~~~---~~L~~~~~~~~vvit 113 (418)
T 1k8k_A 71 T--YATKW------------------PI-------------RHGIVEDWD-LMERFMEQVIF---KYLRAEPEDHYFLLT 113 (418)
T ss_dssp T--SEEEC------------------CE-------------ETTEESCHH-HHHHHHHHHHH---TTTCCCGGGCCEEEE
T ss_pred C--CEEec------------------cc-------------cCCEECCHH-HHHHHHHHHHH---hccCCCCCCCcEEEE
Confidence 0 01111 11 122222332 23344444432 334432 3579999
Q ss_pred eCCCCCHHHHHHHHHHH-HHcCCCeEEeeChhHHHHHh-cc---ccCCCCeEEEEeeCCceeEEEEEEEeCCeEEEEEec
Q 005807 193 VPAYFNDAQRQATKDAG-RIAGLDVQRIINEPTAAALS-YG---MNNKEGLIAVFDLGGGTFDVSVLEISNGVFEVKATN 267 (676)
Q Consensus 193 VPa~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~AAal~-y~---~~~~~~~vlV~D~GgGT~Dvsv~~~~~~~~~v~~~~ 267 (676)
+|++|+..+|++|.+++ +.+|++.+.+++||+||+++ |. ....+.+.+|||+||||||++++. +|.. +....
T Consensus 114 ~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~~~~glVvDiG~gtt~v~~v~--~G~~-~~~~~ 190 (418)
T 1k8k_A 114 EPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVA--EGYV-IGSCI 190 (418)
T ss_dssp ECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSCCCCEEEEEESSSCEEEEEEE--TTEE-CGGGC
T ss_pred eCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCCCCeEEEEEcCCCceEEEEeE--CCEE-cccce
Confidence 99999999999999999 88999999999999999987 42 211122679999999999999975 4432 22223
Q ss_pred CCCCcchHHHHHHHHHHHHHHhhhhccCCCccCHHHHHHHHHHHHHHHHHcCCCCc-----------------eeeeccc
Q 005807 268 GDTFLGGEDFDNALLEFLVSEFKRTERIDLSQDKLALQRLRESAEKAKIELSSTSQ-----------------TEINLPF 330 (676)
Q Consensus 268 g~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~-----------------~~~~i~~ 330 (676)
+..++||+++|+.|.++|..++. ...... -...+|++|+.++.... ..+.+|.
T Consensus 191 ~~~~lGG~~lt~~l~~~l~~~~~---~~~~~~-------~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~~lpd 260 (418)
T 1k8k_A 191 KHIPIAGRDITYFIQQLLRDREV---GIPPEQ-------SLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTGIN 260 (418)
T ss_dssp EEESCSHHHHHHHHHHHHHTTCC---CCCGGG-------HHHHHHHHHHHHCCCCSCHHHHHHHHHHSGGGTCEEEEEEC
T ss_pred EEEeCcHHHHHHHHHHHHHhcCC---CCCCHH-------HHHHHHHHHHhhchhcccHHHHHHhhcccccccceeEECCC
Confidence 56789999999999999876542 111111 12467888888765421 1233332
Q ss_pred cccCCCCCeeeEEEEcHHHH---HHHHhHHH------HHHHHHHHHHHHHcCC--CcCCCcEEEEEcCCcCcHHHHHHHH
Q 005807 331 ITADASGAKHLNITLTRSKF---ETLVNHLI------ERTKAPCKNCLKDANI--TIKDVDEVLLVGGMTRVPKVQEIVT 399 (676)
Q Consensus 331 ~~~~~~g~~~~~~~itr~~f---e~~~~~~v------~~i~~~i~~~l~~~~~--~~~~i~~ViLvGG~s~~p~i~~~l~ 399 (676)
.. ......+.+++++| |.+|+|.+ ..+.+.|.+.|..+.. ....++.|+|+||+|++|.++++|+
T Consensus 261 ~~----~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~pg~~~rl~ 336 (418)
T 1k8k_A 261 AI----SKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQ 336 (418)
T ss_dssp TT----TCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCSTTHHHHHH
T ss_pred CC----CCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceEEeCCccccccHHHHHH
Confidence 11 12455788999999 66666542 5688888999987653 3345688999999999999999998
Q ss_pred HHhCC------------------------CCCCCCCcchhHhhHHHHHhhh
Q 005807 400 EIFGK------------------------SPSKGVNPDEAVALGAAIQGGI 426 (676)
Q Consensus 400 ~~fg~------------------------~~~~~~~p~~aVa~GAal~a~~ 426 (676)
+.|+. ++..+.+|..++..||+++|..
T Consensus 337 ~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 387 (418)
T 1k8k_A 337 RDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAST 387 (418)
T ss_dssp HHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTS
T ss_pred HHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcC
Confidence 76641 1223457889999999999874
No 22
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.93 E-value=5.6e-26 Score=243.39 Aligned_cols=298 Identities=16% Similarity=0.148 Sum_probs=197.5
Q ss_pred ceEEEEcCCceEEEEEEECCceEEEeCCCCCcccceEEEEccC---------CcEEEcHHHHHhhhhCCCchHHHhhhhh
Q 005807 54 DVIGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQK---------GELLVGTPAKRQAVTNPANTLFGTKRLI 124 (676)
Q Consensus 54 ~vvGID~GTt~s~va~~~~~~~~vi~~~~g~~~~PS~v~~~~~---------~~~~~G~~A~~~~~~~p~~~~~~~K~ll 124 (676)
..|+||+||+++++++..++.|.++. ||+|+.... ...++|++|.... .. ..+++
T Consensus 6 ~~ivID~Gs~~~k~G~~~~~~p~~~~--------ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~~----~~--~~~~~-- 69 (375)
T 2fxu_A 6 TALVCDNGSGLVKAGFAGDDAPRAVF--------PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR----GI--LTLKY-- 69 (375)
T ss_dssp CCEEEEECSSEEEEEETTCSSCSEEE--------ECCEEEECTTTC-------CCEEHHHHHHHT----TS--EEEEC--
T ss_pred ceEEEECCCCeEEEEECCCCCCceee--------ccccccccccccccCCCCCCeEechhHhhcC----cc--cceec--
Confidence 57999999999999997766665332 555554321 3467888886531 00 01111
Q ss_pred cCCCCCHHHHHHhccCCeEEEeCCCCCeEEEeCCeeeCHHHHHHHHHHHHHHHHHHHhCCC--CCeEEEEeCCCCCHHHH
Q 005807 125 GRRFNDAQTQKEMKMVPFKIVNAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKS--VSEAVITVPAYFNDAQR 202 (676)
Q Consensus 125 g~~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ev~a~~L~~l~~~a~~~l~~~--~~~~VITVPa~~~~~qr 202 (676)
|+ .+|...+.+ ....+++++.. +.++.. ...++||+|++++..+|
T Consensus 70 ----------------Pi-------------~~G~i~d~d-~~e~i~~~~~~---~~L~~~~~~~~vvit~p~~~~~~~r 116 (375)
T 2fxu_A 70 ----------------PI-------------EHGIITNWD-DMEKIWHHTFY---NELRVAPEEHPTLLTEAPLNPKANR 116 (375)
T ss_dssp ----------------SE-------------ETTEECCHH-HHHHHHHHHHH---TTSCCCGGGSCEEEEECTTCCHHHH
T ss_pred ----------------cc-------------cCCcccCHH-HHHHHHHHHHH---HhcCCCCcCCcEEEEeCCCCcHHHH
Confidence 11 112222222 33444454442 334433 24699999999999999
Q ss_pred HHHHHH-HHHcCCCeEEeeChhHHHHHhccccCCCCeEEEEeeCCceeEEEEEEEeCCeEEEEEecCCCCcchHHHHHHH
Q 005807 203 QATKDA-GRIAGLDVQRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNAL 281 (676)
Q Consensus 203 ~~l~~A-a~~AGl~~~~li~Ep~AAal~y~~~~~~~~vlV~D~GgGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l 281 (676)
+++.++ .+.+|++.+.+++||+|||++++. .+.+|+|+|+||||++.+ .+|. .+....+..++||+++|+.|
T Consensus 117 ~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~----~~~lVvDiG~gtt~v~~v--~~G~-~~~~~~~~~~~GG~~lt~~l 189 (375)
T 2fxu_A 117 EKMTQIMFETFNVPAMYVAIQAVLSLYASGR----TTGIVLDSGDGVTHNVPI--YEGY-ALPHAIMRLDLAGRDLTDYL 189 (375)
T ss_dssp HHHHHHHHHTTCCSEEEEEEHHHHHHHHTTC----SSEEEEEECSSCEEEEEE--ETTE-ECGGGCEEESCCHHHHHHHH
T ss_pred HHHHHHHHHhcCcceEEEccchheeeeecCC----CeEEEEEcCCCceEEeEe--ECCE-EeccceEEeccCHHHHHHHH
Confidence 988876 488899999999999999999985 367999999999998765 4553 22222345789999999999
Q ss_pred HHHHHHHhhhhccCCCccCHHHHHHHHHHHHHHHHHcCCC----------------CceeeeccccccCCCCCeeeEEEE
Q 005807 282 LEFLVSEFKRTERIDLSQDKLALQRLRESAEKAKIELSST----------------SQTEINLPFITADASGAKHLNITL 345 (676)
Q Consensus 282 ~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~----------------~~~~~~i~~~~~~~~g~~~~~~~i 345 (676)
.+++..+. ..+... .-...+|++|+.++.. ....+.+|. ...+.+
T Consensus 190 ~~~l~~~~-----~~~~~~-----~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~lpd---------g~~i~i 250 (375)
T 2fxu_A 190 MKILTERG-----YSFVTT-----AEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPD---------GQVITI 250 (375)
T ss_dssp HHHHHHHT-----CCCCSH-----HHHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECTT---------SCEEEE
T ss_pred HHHHHhcC-----CCCCcH-----HHHHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEECCC---------CCEEEE
Confidence 99998752 112110 0123455566555432 223333331 125778
Q ss_pred cHHHH---HHHHhHH-----HHHHHHHHHHHHHHcCC--CcCCCcEEEEEcCCcCcHHHHHHHHHHhC--------CCCC
Q 005807 346 TRSKF---ETLVNHL-----IERTKAPCKNCLKDANI--TIKDVDEVLLVGGMTRVPKVQEIVTEIFG--------KSPS 407 (676)
Q Consensus 346 tr~~f---e~~~~~~-----v~~i~~~i~~~l~~~~~--~~~~i~~ViLvGG~s~~p~i~~~l~~~fg--------~~~~ 407 (676)
+++.| |.+++|. ...+.+.|.+.+..+.. ....++.|+|+||+|++|.++++|++.++ .++.
T Consensus 251 ~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~p~~~~v~v~ 330 (375)
T 2fxu_A 251 GNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKII 330 (375)
T ss_dssp STHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHSCTTCCCCEE
T ss_pred ChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhCCCCeeEEEE
Confidence 88877 4455553 34577777888876532 22335789999999999999999999885 2333
Q ss_pred CCCCcchhHhhHHHHHhhh
Q 005807 408 KGVNPDEAVALGAAIQGGI 426 (676)
Q Consensus 408 ~~~~p~~aVa~GAal~a~~ 426 (676)
.+.+|.++++.||+++|..
T Consensus 331 ~~~~p~~~~w~G~si~a~l 349 (375)
T 2fxu_A 331 APPERKYSVWIGGSILASL 349 (375)
T ss_dssp CCTTTTSHHHHHHHHHHHC
T ss_pred cCCCCCccEEcchHHhhCc
Confidence 5679999999999999983
No 23
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.93 E-value=1.9e-25 Score=241.13 Aligned_cols=197 Identities=16% Similarity=0.145 Sum_probs=156.2
Q ss_pred HHHHHHHHHHHHcCCCeEEeeChhHHHHHhccccCCCC-eEEEEeeCCceeEEEEEEEeCCeEEEEEecCCCCcchHHHH
Q 005807 200 AQRQATKDAGRIAGLDVQRIINEPTAAALSYGMNNKEG-LIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFD 278 (676)
Q Consensus 200 ~qr~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~-~vlV~D~GgGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D 278 (676)
...+.+.+|++.|||++..++.||.|||++|......+ .++|+|+||||||++++. ++.+.. .++.++||++||
T Consensus 168 ~~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~~~~~gv~vvDiGggttdisi~~--~g~~~~---~~~i~~GG~~it 242 (419)
T 4a2a_A 168 KVYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYK--NGVPIK---ISYVPVGMKHVI 242 (419)
T ss_dssp HHHHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHHHHHHCEEEEEECSSSEEEEEEE--TTEEEE---EEEESCCHHHHH
T ss_pred HHHHHHHHHHHHcCCcEEEEEEHHHHHHHHhhccccccCCEEEEEECCCcEEEEEEE--CCEEEE---EEecccHHHHHH
Confidence 45678999999999999999999999999987554333 899999999999999976 555433 345789999999
Q ss_pred HHHHHHHHHHhhhhccCCCccCHHHHHHHHHHHHHHHHHcCCC-----CceeeeccccccCCCCCeeeEEEEcHHHHHHH
Q 005807 279 NALLEFLVSEFKRTERIDLSQDKLALQRLRESAEKAKIELSST-----SQTEINLPFITADASGAKHLNITLTRSKFETL 353 (676)
Q Consensus 279 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~-----~~~~~~i~~~~~~~~g~~~~~~~itr~~fe~~ 353 (676)
+.|...+.- ....||++|+.++.. ....+.++... ......++|++|+++
T Consensus 243 ~dIa~~l~~-------------------~~~~AE~iK~~~g~a~~~~~~~~~i~v~~~~------~~~~~~is~~~l~~i 297 (419)
T 4a2a_A 243 KDVSAVLDT-------------------SFEESERLIITHGNAVYNDLKEEEIQYRGLD------GNTIKTTTAKKLSVI 297 (419)
T ss_dssp HHHHHHHTC-------------------CHHHHHHHHHHHCCSCCTTCCCCEEEEECTT------SCSEEEEEHHHHHHH
T ss_pred HHHHHHHCC-------------------CHHHHHHHHHHhccCcccCCCCceEEEeecC------CccceEEcHHHHHHH
Confidence 999876432 236899999998753 33455555432 135688999999999
Q ss_pred HhHHHHHHHHHHHHHHHHcCC------CcCCCcEEEEEcCCcCcHHHHHHHHHHhCCCCC--C-----C----------C
Q 005807 354 VNHLIERTKAPCKNCLKDANI------TIKDVDEVLLVGGMTRVPKVQEIVTEIFGKSPS--K-----G----------V 410 (676)
Q Consensus 354 ~~~~v~~i~~~i~~~l~~~~~------~~~~i~~ViLvGG~s~~p~i~~~l~~~fg~~~~--~-----~----------~ 410 (676)
++|.++++.+.|++.|+.++. ....++.|+|+||+|++|.|++.+++.||.++. . + .
T Consensus 298 i~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g~~vri~~~~~~~p~~~~~~~~~~~ 377 (419)
T 4a2a_A 298 IHARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFKSPVRTGCYANSDRPSIINADEVAN 377 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHTSCEEECCGGGSSSCCCBTCHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHCCCeEEEecCCCCchhccCcccccC
Confidence 999999999999999999987 345689999999999999999999999986532 1 1 4
Q ss_pred CcchhHhhHHHHHhhh
Q 005807 411 NPDEAVALGAAIQGGI 426 (676)
Q Consensus 411 ~p~~aVa~GAal~a~~ 426 (676)
+|..+++.|.++++..
T Consensus 378 ~P~~~t~~Gl~~~~~~ 393 (419)
T 4a2a_A 378 DPSFAAAFGNVFAVSE 393 (419)
T ss_dssp CGGGHHHHHTTCC---
T ss_pred CchHHHHHHHHHHHhh
Confidence 8999999999998865
No 24
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=99.91 E-value=1.5e-24 Score=195.13 Aligned_cols=121 Identities=71% Similarity=1.046 Sum_probs=111.0
Q ss_pred ceeEEEeecccccceeeeCCeEEEEEcCCCCCCCccceeeeecccCCceeEEEEeecCccccccccceeEEEEcCCCCCC
Q 005807 432 KELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMAADNKALGEFELMGIPPAP 511 (676)
Q Consensus 432 ~~~~~~d~~~~s~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~ge~~~~~~~~~lg~~~l~~~~~~~ 511 (676)
+++.+.|++|++|||++.++.|.+||+||++||++++++|++..|||+.+.|.|||||+..+.+|..||+|.|.++||+|
T Consensus 15 ~d~~l~Dv~p~slGIe~~~g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~~n~~Lg~f~l~gipp~p 94 (135)
T 1q5l_A 15 RGSHMVDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAP 94 (135)
T ss_dssp ------CCCSSCCCEEETTTEECCSSCSSSCSSBCCEEEECCCSSSCSSCEEEEEECCSSSCSSSEEEEEEECCCCCSCC
T ss_pred CcEEEEEeecCcEEEEEECCEEEEEEcCCCeEeEeEeEEEEeccCCceEEEEEEEEeCCcccccCcEEEEEEEeCCCCCC
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeeEEEEEEcCCccEEEEEEecCCCceeeEEeccCCCC
Q 005807 512 RGIPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGL 552 (676)
Q Consensus 512 ~g~~~i~v~f~~d~~g~l~v~~~~~~t~~~~~~~i~~~~~~ 552 (676)
+|.++|+|+|++|.||+|+|++.|+.||++..++|....+|
T Consensus 95 ~G~~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~~~l 135 (135)
T 1q5l_A 95 RGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGL 135 (135)
T ss_dssp SSSCCEEEEEEECTTSEEEEEEEETTTCCEEEEEEECSCCC
T ss_pred CceeEEEEEEEECCCCEEEEEEEECCCCCEEEEEEecCCCC
Confidence 99999999999999999999999999999999999876543
No 25
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.88 E-value=1.8e-23 Score=219.04 Aligned_cols=225 Identities=18% Similarity=0.173 Sum_probs=148.5
Q ss_pred eeCHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCC-CCHH--HH--HHHHHH------------HHHcCCCeEEeeCh
Q 005807 160 QYSPSQIGAFVLTKMKETAESYLGKSVSEAVITVPAY-FNDA--QR--QATKDA------------GRIAGLDVQRIINE 222 (676)
Q Consensus 160 ~~~~~ev~a~~L~~l~~~a~~~l~~~~~~~VITVPa~-~~~~--qr--~~l~~A------------a~~AGl~~~~li~E 222 (676)
.+++..+++.+ ..|+. +.. .+.+ ..+|+++|.. |... |+ +++.+- ++.+++..+.+++|
T Consensus 73 ~~~~~~l~~i~-~aL~~-~~~-~~~~-~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~e 148 (320)
T 2zgy_A 73 QYSDVNVVAVH-HALLT-SGL-PVSE-VDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMPE 148 (320)
T ss_dssp GGSHHHHHHHH-HHHHH-HSC-CSCE-EEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEES
T ss_pred cchHHHHHHHH-HHHHH-cCC-CCce-EEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEecC
Confidence 46677666643 44442 211 1222 3699999987 6531 21 212111 23445677899999
Q ss_pred hHHHHHhccccCC-CCeEEEEeeCCceeEEEEEEEeCCeEEEEEecCCCCcchHHHHHHHHHHHHHHhhhhccCCCccCH
Q 005807 223 PTAAALSYGMNNK-EGLIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEFKRTERIDLSQDK 301 (676)
Q Consensus 223 p~AAal~y~~~~~-~~~vlV~D~GgGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~ 301 (676)
|.||+++|..... +..++|+|+||||+|+++++ ++.+.+.+..++.++||.+||+.|.+++.++ +.++. .
T Consensus 149 ~~aa~~~~~~~~~~~~~~~vvDiGggttd~~v~~--~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~-----~~~i~--~ 219 (320)
T 2zgy_A 149 SIPAGYEVLQELDELDSLLIIDLGGTTLDISQVM--GKLSGISKIYGDSSLGVSLVTSAVKDALSLA-----RTKGS--S 219 (320)
T ss_dssp SHHHHHHHHHHSCTTCEEEEEEECSSCEEEEEEE--GGGCCEEEEEEECSCCTHHHHHHHHHHTTCC-----SBGGG--H
T ss_pred cHHHHHhhhccccCCCCEEEEEcCCCeEEEEEEe--CCeeEEeeecCCccccHHHHHHHHHHHHHHc-----CCCCC--H
Confidence 9999998874433 34999999999999999987 5555566667888999999999999988642 22221 1
Q ss_pred HHHHHHHHHHHHH-HHHcCCCCceeeeccccccCCCCCeeeEEEEcHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcCCCc
Q 005807 302 LALQRLRESAEKA-KIELSSTSQTEINLPFITADASGAKHLNITLTRSKFETLVNHLIERTKAPCKNCLKDANITIKDVD 380 (676)
Q Consensus 302 ~~~~~L~~~~e~~-K~~Ls~~~~~~~~i~~~~~~~~g~~~~~~~itr~~fe~~~~~~v~~i~~~i~~~l~~~~~~~~~i~ 380 (676)
..+|++ |..- . ... .....+ ..-..+++.+++++.++++.+.|.+.+++. .+++
T Consensus 220 -------~~ae~~lk~~~---~--~~~---~~~~i~------~~~~~~~~~~~i~~~~~~~~~~i~~~i~~~----~~~~ 274 (320)
T 2zgy_A 220 -------YLADDIIIHRK---D--NNY---LKQRIN------DENKISIVTEAMNEALRKLEQRVLNTLNEF----SGYT 274 (320)
T ss_dssp -------HHHHHHHHTTT---C--HHH---HHHHSS------SSCTHHHHHHHHHHHHHHHHHHHHHHHTTC----CCCC
T ss_pred -------HHHHHHHHHhh---h--hhc---ccceec------CchhhHHHHHHHHHHHHHHHHHHHHHHHhh----cCCC
Confidence 234444 3320 0 000 000000 001345666677777777777777666552 5689
Q ss_pred EEEEEcCCcCcHHHHHHHHHHhCC---CCCCCCCcchhHhhHHHHHh
Q 005807 381 EVLLVGGMTRVPKVQEIVTEIFGK---SPSKGVNPDEAVALGAAIQG 424 (676)
Q Consensus 381 ~ViLvGG~s~~p~i~~~l~~~fg~---~~~~~~~p~~aVa~GAal~a 424 (676)
.|+|+||+|++ +++.|++.|+. ++....||++|+|.||+++|
T Consensus 275 ~vvl~GGga~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 275 HVMVIGGGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp EEEEESTTHHH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred eEEEECChHHH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 99999999987 99999999987 47778999999999999875
No 26
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.80 E-value=1.6e-20 Score=202.03 Aligned_cols=214 Identities=17% Similarity=0.180 Sum_probs=91.1
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHH-HHcCCCeEEeeChhHHHHHhccccCCCCeEEEEeeCCceeEEEEEEEeCCeEEEEE
Q 005807 187 SEAVITVPAYFNDAQRQATKDAG-RIAGLDVQRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSVLEISNGVFEVKA 265 (676)
Q Consensus 187 ~~~VITVPa~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~AAal~y~~~~~~~~vlV~D~GgGT~Dvsv~~~~~~~~~v~~ 265 (676)
..++||+|+.++..+|+++.+++ +.+|++.+.+++||.||+++++.. ..+|+|+|+|||+++.+. +|.. +..
T Consensus 105 ~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~~----~~lVVDiG~g~T~v~pv~--~G~~-~~~ 177 (394)
T 1k8k_B 105 CKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGLL----TGVVVDSGDGVTHICPVY--EGFS-LPH 177 (394)
T ss_dssp -----------------------------------------------------CCEEEECSSCEEEECEE--TTEE-CST
T ss_pred CcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCCc----eEEEEEcCCCceEeeeeE--CCEE-ccc
Confidence 35999999999999999988864 788999999999999999998753 569999999999998753 4432 111
Q ss_pred ecCCCCcchHHHHHHHHHHHHHHhhhhccCCCccCHHHHHHHHHHHHHHHHHcCCCCc----------------eeeecc
Q 005807 266 TNGDTFLGGEDFDNALLEFLVSEFKRTERIDLSQDKLALQRLRESAEKAKIELSSTSQ----------------TEINLP 329 (676)
Q Consensus 266 ~~g~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~----------------~~~~i~ 329 (676)
......+||+++|+.|.++|..+. +......+ ...+|++|+.++.... ..+.+|
T Consensus 178 ~~~~~~~GG~~lt~~l~~~l~~~~---~~~~~~~~-------~~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~~~~~lp 247 (394)
T 1k8k_B 178 LTRRLDIAGRDITRYLIKLLLLRG---YAFNHSAD-------FETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYTLP 247 (394)
T ss_dssp TCEEESCCHHHHHHHHHHHHHHTT---CCCCTTTT-------HHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECT
T ss_pred ceEEeeccHHHHHHHHHHHHHhcC---CCCCcHHH-------HHHHHHHHHhheeEecCHHHHHHhhccCCcCceEEECC
Confidence 123468999999999999987641 11111111 2346667776654321 112222
Q ss_pred ccccCCCCCeeeEEEEcHHHH---HHHHhHH-----HHHHHHHHHHHHHHcCCC--cCCCcEEEEEcCCcCcHHHHHHHH
Q 005807 330 FITADASGAKHLNITLTRSKF---ETLVNHL-----IERTKAPCKNCLKDANIT--IKDVDEVLLVGGMTRVPKVQEIVT 399 (676)
Q Consensus 330 ~~~~~~~g~~~~~~~itr~~f---e~~~~~~-----v~~i~~~i~~~l~~~~~~--~~~i~~ViLvGG~s~~p~i~~~l~ 399 (676)
....+.++++.| |-+++|. ...+.+.|.+.+..+..+ ..-++.|+|+||+|++|.+.++|+
T Consensus 248 ---------dg~~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~ 318 (394)
T 1k8k_B 248 ---------DGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLE 318 (394)
T ss_dssp ---------TSCEEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHHH
T ss_pred ---------CCCEEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHHH
Confidence 112567788777 3344442 245677778888876432 223578999999999999999998
Q ss_pred HHhCC-----------------C--CCCCCCcchhHhhHHHHHhhh
Q 005807 400 EIFGK-----------------S--PSKGVNPDEAVALGAAIQGGI 426 (676)
Q Consensus 400 ~~fg~-----------------~--~~~~~~p~~aVa~GAal~a~~ 426 (676)
+.++. + +..+.+|..++..|++++|..
T Consensus 319 ~el~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 364 (394)
T 1k8k_B 319 RELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADI 364 (394)
T ss_dssp HHHHHHHHHHTCSSCCCTTCCCCC----------------------
T ss_pred HHHHHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhCC
Confidence 87742 1 222567889999999998874
No 27
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.79 E-value=1.6e-19 Score=185.05 Aligned_cols=186 Identities=18% Similarity=0.170 Sum_probs=125.3
Q ss_pred HcCCCeEEeeChhHHHHHhccccCCCCeEEEEeeCCceeEEEEEEEeCCeEEEEEecCCCCcchHHHHHHHHHHHHHHhh
Q 005807 211 IAGLDVQRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEFK 290 (676)
Q Consensus 211 ~AGl~~~~li~Ep~AAal~y~~~~~~~~vlV~D~GgGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l~~~l~~~~~ 290 (676)
.++...+..|+||+|+++++..... +...|+|+|||+++++++. .++.+++....+....|+.+|+..+.+++...+.
T Consensus 68 ~a~~~~~~~Vne~~aha~a~~~~~~-~~~~vl~lgG~~~~~~~~~-~~g~~~~~~~~~~~~~g~G~f~d~~a~~l~~~~~ 145 (276)
T 4ehu_A 68 MNYSDADKQISELSCHARGVNFIIP-ETRTIIDIGGQDAKVLKLD-NNGRLLNFLMNDKCAAGTGRFLDVMAKIIEVDVS 145 (276)
T ss_dssp GGCCSCSEECCHHHHHHHHHHHHST-TCCEEEEECSSCEEEEEEC-TTSCEEEEEEECSCSTTSHHHHHHHHHHHTCCGG
T ss_pred HHhhCCCcccchHHHHHHHHHHhCC-CCCeEEEEcCCCceEEEEE-ecCceEEEEeCCCcCcchhhHHHHHHHHhccChh
Confidence 3666778999999999998766543 3457899999999999884 5678888888888999999999999988865443
Q ss_pred hhccCCCccCHHHHHHHHHHHHHHHH--HcCCCCceeeeccccccCCCCCeeeEEEEcHHHHHHHHhHHHHHHHHHHHHH
Q 005807 291 RTERIDLSQDKLALQRLRESAEKAKI--ELSSTSQTEINLPFITADASGAKHLNITLTRSKFETLVNHLIERTKAPCKNC 368 (676)
Q Consensus 291 ~~~~~~~~~~~~~~~~L~~~~e~~K~--~Ls~~~~~~~~i~~~~~~~~g~~~~~~~itr~~fe~~~~~~v~~i~~~i~~~ 368 (676)
..... +..++. .+++.......-+.+.. .-.....++++..+.+.+.+.+...
T Consensus 146 ~~~~~---------------~~~a~~~~~i~~~~~~f~~s~~~~~----------~~~~~~~~di~a~~~~~v~~~l~~~ 200 (276)
T 4ehu_A 146 ELGSI---------------SMNSQNEVSISSTCTVFAESEVISH----------LSENAKIEDIVAGIHTSVAKRVSSL 200 (276)
T ss_dssp GHHHH---------------HTTCSSCCCCCCCSHHHHHHHHHHH----------HHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHH---------------HhcCCCCCCcCCccchhhhhHHHHh----------hhccccHHHHHHHHHHHHHHHHHHH
Confidence 21100 000000 00000000000000000 0000112455666666655555554
Q ss_pred HHHcCCCcCCCcEEEEEcCCcCcHHHHHHHHHHhCCCCCCCCCcchhHhhHHHHHhhhc
Q 005807 369 LKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIFGKSPSKGVNPDEAVALGAAIQGGIL 427 (676)
Q Consensus 369 l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~fg~~~~~~~~p~~aVa~GAal~a~~l 427 (676)
.... ..++.|+|+||.+++|.|++.+++.||.++..+.+|++++|+|||++|...
T Consensus 201 ~~~~----~~~~~vvl~GGva~n~~lr~~l~~~~g~~~~~p~~p~~~~A~GAAl~A~~~ 255 (276)
T 4ehu_A 201 VKRI----GVQRNVVMVGGVARNSGIVRAMAREINTEIIVPDIPQLTGALGAALYAFDE 255 (276)
T ss_dssp HHHH----CCCSSEEEESGGGGCHHHHHHHHHHHTSCEECCSSGGGHHHHHHHHHHHHH
T ss_pred HHhc----ccCCeEEEecCccchHHHHHHHHHHHCCCeeeCCCcchHHHHHHHHHHHHH
Confidence 4443 456899999999999999999999999999999999999999999999754
No 28
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.72 E-value=2.5e-17 Score=173.80 Aligned_cols=203 Identities=17% Similarity=0.228 Sum_probs=137.7
Q ss_pred eEEEEeCCCCCHHHH-HHHHHHHHHcCC------------CeEEeeChhHHHHHhccccC-------CCCeEEEEeeCCc
Q 005807 188 EAVITVPAYFNDAQR-QATKDAGRIAGL------------DVQRIINEPTAAALSYGMNN-------KEGLIAVFDLGGG 247 (676)
Q Consensus 188 ~~VITVPa~~~~~qr-~~l~~Aa~~AGl------------~~~~li~Ep~AAal~y~~~~-------~~~~vlV~D~GgG 247 (676)
.+++.+|..+...+| +++++++...+- ..+.+++||.||+++++.+. ....++|+|+|||
T Consensus 115 ~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGgg 194 (355)
T 3js6_A 115 VIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGSG 194 (355)
T ss_dssp EEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECSS
T ss_pred EEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCCC
Confidence 789999999888887 589998875543 46789999999999987653 2348999999999
Q ss_pred eeEEEEEEEeCCeEEEEEecCCCCcchHHHHHHHHHHHHHHhhhhccCCCccCHHHHHHHHHHHHHHHHHcCCCCceeee
Q 005807 248 TFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEFKRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEIN 327 (676)
Q Consensus 248 T~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~ 327 (676)
|+|++++ .++.+. ...++...+||..+++.+.+++.+++. +..+. . ...++.+. +
T Consensus 195 Ttd~~v~--~~~~~~-~~~s~s~~~G~~~~~~~i~~~l~~~~~---g~~l~--~-------~~i~~g~~---------~- 249 (355)
T 3js6_A 195 TTIIDTY--QNMKRV-EEESFVINKGTIDFYKRIASHVSKKSE---GASIT--P-------RMIEKGLE---------Y- 249 (355)
T ss_dssp CEEEEEE--ETTEEC-GGGCEEESCCHHHHHHHHHHHTC-----------C--H-------HHHHSCCC-----------
T ss_pred cEEEEEE--cCCEEc-cccccCcchHHHHHHHHHHHHHHHhcC---CCcCC--H-------HHHhcCCc---------c-
Confidence 9999998 344431 112334679999999999999887642 11111 1 11111110 0
Q ss_pred ccccccCCCCCeeeEEEEcHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcCCCcEEEEEcCCcCcHH--HHHHHHHHhCCC
Q 005807 328 LPFITADASGAKHLNITLTRSKFETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPK--VQEIVTEIFGKS 405 (676)
Q Consensus 328 i~~~~~~~~g~~~~~~~itr~~fe~~~~~~v~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~--i~~~l~~~fg~~ 405 (676)
.....+ ..-.+.+ .+.+++.+++++++|.+.|++.+.+ +..++.|+|+||++.++. |.+.+++.|+..
T Consensus 250 ---~~~~~~--~~k~~di-~~~i~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGGa~l~~~~l~~~i~~~~~~~ 319 (355)
T 3js6_A 250 ---KQCKLN--QKTVIDF-KDEFYKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGGANIHFDSLSHYYSDVFEKA 319 (355)
T ss_dssp -----------------C-HHHHHHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTTHHHHHHHHHHHSSSCEECC
T ss_pred ---cccccc--ccccccH-HHHHHHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcchhcchhhHHHHHHHHCCCC
Confidence 000000 0001122 3456677777777777777777754 356799999999999998 899999988542
Q ss_pred CCCCCCcchhHhhHHHHHhhhccC
Q 005807 406 PSKGVNPDEAVALGAAIQGGILRG 429 (676)
Q Consensus 406 ~~~~~~p~~aVa~GAal~a~~l~~ 429 (676)
.||.+|+|.|+..++..+.+
T Consensus 320 ----~~p~~anA~G~~~~~~~~~~ 339 (355)
T 3js6_A 320 ----DDSQFSNVRGYEKLGELLKN 339 (355)
T ss_dssp ----SSGGGHHHHHHHHHHHHHHH
T ss_pred ----CCcHHHHHHHHHHHHHHHHh
Confidence 89999999999999887653
No 29
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.59 E-value=7e-16 Score=161.42 Aligned_cols=202 Identities=15% Similarity=0.134 Sum_probs=138.7
Q ss_pred CeEEEEeCCCCCH--HHHHHHHHHHHHc--------C------CCeEEeeChhHHHHHhccccCCCCeEEEEeeCCceeE
Q 005807 187 SEAVITVPAYFND--AQRQATKDAGRIA--------G------LDVQRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFD 250 (676)
Q Consensus 187 ~~~VITVPa~~~~--~qr~~l~~Aa~~A--------G------l~~~~li~Ep~AAal~y~~~~~~~~vlV~D~GgGT~D 250 (676)
..+++++|..+.. .+|+.+++....- | +..+.+++||.+|.+.+....+...++|+|+||||+|
T Consensus 106 v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~~~~~~~~v~vvDiGggTtd 185 (329)
T 4apw_A 106 VQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQENFKNKNVAVIDFGGLNMG 185 (329)
T ss_dssp EEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSCCCCTTCEEEEEEECSSCEE
T ss_pred EEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcchhhccCCEEEEEeCCCcEE
Confidence 3789999977663 3677777766521 1 1346789999998887643333349999999999999
Q ss_pred EEEEEEeCCeEEEEEecCCCCcchHHHHHHHHHHHHH-HhhhhccCCCccCHHHHHHHHHHHHHHHHHcCCCCceeeecc
Q 005807 251 VSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVS-EFKRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLP 329 (676)
Q Consensus 251 vsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l~~~l~~-~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~ 329 (676)
++++. ++.+ +...++...+||.++++.+.+++.. + ++..+.. ..+|++|+. . ...
T Consensus 186 ~~v~~--~g~~-~~~~~~~~~~G~~~~~~~i~~~l~~~~----~g~~i~~---------~~~e~i~~~-g---~~~---- 241 (329)
T 4apw_A 186 FSLYR--NCVV-NPSERFIEEHGVKDLIIRVGDALTDLN----NGNLITN---------EQAESALNN-G---YMK---- 241 (329)
T ss_dssp EEEEE--TTEE-CGGGCEEESCCHHHHHHHHHTSSSSCS----SCSCTTS---------BTTTTCSSS-C---SSC----
T ss_pred EEEEE--CCEE-eeccccchhhHHHHHHHHHHHHHHhhc----cCCCCCH---------HHHHHHHhc-C---Ccc----
Confidence 99987 4443 2222345779999999999987765 3 3333322 123333332 0 000
Q ss_pred ccccCCCCCeeeEEEEcHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcCCCcEEEEEcCCcCcHHHHHHHHHHhCCCCCCC
Q 005807 330 FITADASGAKHLNITLTRSKFETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIFGKSPSKG 409 (676)
Q Consensus 330 ~~~~~~~g~~~~~~~itr~~fe~~~~~~v~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~fg~~~~~~ 409 (676)
.. .++ ..+..+.+++.++++++.|.+.+++. +.+++.++.|+|+||++.+ +.+.|++.|+.++...
T Consensus 242 -~g------~~~-~~~~~~~i~~~~~e~~~~I~~~i~~~----~~~~~~~~~IvltGGGA~l--~~~~l~~~~~~~v~v~ 307 (329)
T 4apw_A 242 -KG------GEI-DTESSTVIKKVKEKFLKDAIKLIEKR----GFKLDQLDSLIFIGGTTQK--LKEQISKTYPNNSIIT 307 (329)
T ss_dssp -EE------CTT-CCSTTHHHHHHHHHHHHHHHHHHHHH----TCCTTSCSEEEEESTTHHH--HHHHHHHHSTTCEECC
T ss_pred -cC------Ccc-hhHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHccEEEEECChHHH--HHHHHHHHcCCCCEec
Confidence 00 111 13456777777777777777777665 3445568999999999988 6799999999777788
Q ss_pred CCcchhHhhHHHHHhhh
Q 005807 410 VNPDEAVALGAAIQGGI 426 (676)
Q Consensus 410 ~~p~~aVa~GAal~a~~ 426 (676)
.||..|+|.|+..++..
T Consensus 308 ~~P~~a~a~G~~~~~~~ 324 (329)
T 4apw_A 308 NNSQWTTCEGLYKVAVA 324 (329)
T ss_dssp SSGGGHHHHHHHHHHHH
T ss_pred CCChhhHHHHHHHHHhh
Confidence 99999999999988764
No 30
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.58 E-value=2.3e-14 Score=156.06 Aligned_cols=180 Identities=14% Similarity=0.165 Sum_probs=121.0
Q ss_pred CceEEEEcCCceEEEEEEECCceEEEeCCCCCcccceEEEEccC---CcEEEcHHHHHhhhhCCCchHHHhhhhhcCCCC
Q 005807 53 NDVIGVDLGTTNSCVAVMEGKNPKVIENSEGTRTTPSVVAFNQK---GELLVGTPAKRQAVTNPANTLFGTKRLIGRRFN 129 (676)
Q Consensus 53 ~~vvGID~GTt~s~va~~~~~~~~vi~~~~g~~~~PS~v~~~~~---~~~~~G~~A~~~~~~~p~~~~~~~K~llg~~~~ 129 (676)
...|+||+||.++++++..++.|.++ +||+|+.... ...+||..|.... +.+ ..+
T Consensus 23 ~~~iVID~GS~~~kaG~ag~~~P~~v--------~PSvVg~~~~~~~~~~~vG~e~~~~~---r~~--l~l--------- 80 (498)
T 3qb0_A 23 VSAVVIDPGSYTTNIGYSGSDFPQSI--------LPSVYGKYTADEGNKKIFSEQSIGIP---RKD--YEL--------- 80 (498)
T ss_dssp BSCEEEECCSSEEEEEETTCSSCSEE--------EESEEEEESSCSSCCEECCTTGGGSC---CTT--EEE---------
T ss_pred CCeEEEECCCcEEEEEECCCCCeeee--------cCceeEEeccCCCccEEEecHHHhcC---cCc--eEE---------
Confidence 35799999999999998766656655 4999998542 2467887532210 100 000
Q ss_pred CHHHHHHhccCCeEEEeCCCCCeEEEeCCeeeCHHHHHHHHHHHHHHHHHHHhCCC--CC-eEEEEeCCCCCHHHHHHHH
Q 005807 130 DAQTQKEMKMVPFKIVNAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKS--VS-EAVITVPAYFNDAQRQATK 206 (676)
Q Consensus 130 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ev~a~~L~~l~~~a~~~l~~~--~~-~~VITVPa~~~~~qr~~l~ 206 (676)
..|+ .+|...+ -+....+++|+... .++.. -. .++||.|.......|+.|.
T Consensus 81 ---------~~Pi-------------~~GvI~d-wd~~E~iw~~~f~~---~L~v~p~~~~pvlltep~~n~~~~Re~~~ 134 (498)
T 3qb0_A 81 ---------KPII-------------ENGLVID-WDTAQEQWQWALQN---ELYLNSNSGIPALLTEPVWNSTENRKKSL 134 (498)
T ss_dssp ---------EESE-------------ETTEESC-HHHHHHHHHHHHHH---TSCCSCCTTCCEEEEECTTCCHHHHHHHH
T ss_pred ---------eccC-------------cCCEEcc-HHHHHHHHHHHHHh---hhCCCcccCCceEEEeCCCCcHHHHHHHH
Confidence 0111 1223223 34445555655532 33321 23 5899999999999999998
Q ss_pred HHH-HHcCCCeEEeeChhHHHHHhccccCCCCeEEEEeeCCceeEEEEEEEeCCeEEEEEecCCCCcchHHHHHHHHHHH
Q 005807 207 DAG-RIAGLDVQRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFL 285 (676)
Q Consensus 207 ~Aa-~~AGl~~~~li~Ep~AAal~y~~~~~~~~vlV~D~GgGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l~~~l 285 (676)
+.+ +.+|++.+.++.+|.+|+++++.. +-||+|+|+|+++++.+. +|.. +........+||+++|+.|.++|
T Consensus 135 eilFE~f~vpav~l~~~~vlalya~G~~----tglVVDiG~g~T~vvPI~--~G~~-l~~ai~rl~vgG~~lt~~L~~lL 207 (498)
T 3qb0_A 135 EVLLEGMQFEACYLAPTSTCVSFAAGRP----NCLVVDIGHDTCSVSPIV--DGMT-LSKSTRRNFIAGKFINHLIKKAL 207 (498)
T ss_dssp HHHHTTSCCSEEEEEEHHHHHHHHHTCS----SEEEEEECSSCEEEEEEE--TTEE-CGGGCEEESCSHHHHHHHHHHHT
T ss_pred HHHHhhcCCCeEeecchHHHHHHHcCCC----eEEEEEcCCCcEEEEEEe--CCEE-ccccceeccccHHHHHHHHHHHH
Confidence 875 889999999999999999988763 349999999999999864 3321 11111125799999999999998
Q ss_pred HH
Q 005807 286 VS 287 (676)
Q Consensus 286 ~~ 287 (676)
..
T Consensus 208 ~~ 209 (498)
T 3qb0_A 208 EP 209 (498)
T ss_dssp TT
T ss_pred Hh
Confidence 64
No 31
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.53 E-value=3.4e-15 Score=161.05 Aligned_cols=242 Identities=15% Similarity=0.106 Sum_probs=151.8
Q ss_pred HHHHHHHHHHHHHHHHHhCCC--CCeEEEEeCCCCCHHHHHHHHHHH-HHcCCCeEEeeChhHHHHHhccccCC----CC
Q 005807 165 QIGAFVLTKMKETAESYLGKS--VSEAVITVPAYFNDAQRQATKDAG-RIAGLDVQRIINEPTAAALSYGMNNK----EG 237 (676)
Q Consensus 165 ev~a~~L~~l~~~a~~~l~~~--~~~~VITVPa~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~AAal~y~~~~~----~~ 237 (676)
+....+++|+.. +.++.. -..+++|.|...+...|+.+.+.+ +..|++.+.++.+|.+|+++.+.... ..
T Consensus 103 d~~e~iw~~~~~---~~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~~~~~~~ 179 (427)
T 3dwl_A 103 DHMERFWQQSLF---KYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSL 179 (427)
T ss_dssp HHHHHHHHHHHH---TTSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTTTCSCCC
T ss_pred HHHHHHHHHHHh---HhhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCcccccCCCc
Confidence 344445554432 334432 247999999999999999998887 78999999999999999999885421 13
Q ss_pred eEEEEeeCCceeEEEEEEEeCCeEEEEEecCCCCcchHHHHHHHHHHHHHHhhhhccCCCccCHHHHHHHHHHHHHHHHH
Q 005807 238 LIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEFKRTERIDLSQDKLALQRLRESAEKAKIE 317 (676)
Q Consensus 238 ~vlV~D~GgGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ 317 (676)
+-||+|+|+|+|+++.+. +|..- ........+||+++|+.|.++|..+... ..-...+|.+|+.
T Consensus 180 tglVVDiG~g~T~v~PV~--~G~~l-~~~~~rl~~gG~~lt~~L~~lL~~~~~~-------------~~~~~~~~~IKe~ 243 (427)
T 3dwl_A 180 TGTVVDSGDGVTHIIPVA--EGYVI-GSSIKTMPLAGRDVTYFVQSLLRDRNEP-------------DSSLKTAERIKEE 243 (427)
T ss_dssp CEEEEEESSSCEEEEEEE--TTEEC-GGGCEEESCCHHHHHHHHHHTTC---------------------CHHHHHHHHH
T ss_pred eEEEEECCCCceEEEEEE--CCEEe-hhhheeccccHHHHHHHHHHHHHHcCCC-------------chhHHHHHHHHHh
Confidence 679999999999999972 33211 0011124799999999999988655421 0112456777777
Q ss_pred cCCCCce---ee--------ecccccc-CCCCCeeeEEEEcHHHH---HHHHhHH------HHHHHHHHHHHHHHcCCCc
Q 005807 318 LSSTSQT---EI--------NLPFITA-DASGAKHLNITLTRSKF---ETLVNHL------IERTKAPCKNCLKDANITI 376 (676)
Q Consensus 318 Ls~~~~~---~~--------~i~~~~~-~~~g~~~~~~~itr~~f---e~~~~~~------v~~i~~~i~~~l~~~~~~~ 376 (676)
++..... ++ .+....- ..+| ....+.+..++| |-+++|- ...|.+.|.+.+.++..+.
T Consensus 244 ~cyv~~d~~~e~~~~~~~~~~~~~~~l~~~~g-~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~~dl 322 (427)
T 3dwl_A 244 CCYVCPDIVKEFSRFDREPDRYLKYASESITG-HSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPIDV 322 (427)
T ss_dssp HCCCCSCHHHHHHHTTC-----CCBCC----------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSCHHH
T ss_pred cCcccCCHHHHHHHhhcCccccceeEeeCCCC-CeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCCHHH
Confidence 6643211 00 0000000 0011 223456666665 3445552 2457777778777654321
Q ss_pred --CCCcEEEEEcCCcCcHHHHHHHHHHhC----------------------CCCCCCCCcchhHhhHHHHHhhh
Q 005807 377 --KDVDEVLLVGGMTRVPKVQEIVTEIFG----------------------KSPSKGVNPDEAVALGAAIQGGI 426 (676)
Q Consensus 377 --~~i~~ViLvGG~s~~p~i~~~l~~~fg----------------------~~~~~~~~p~~aVa~GAal~a~~ 426 (676)
.-...|+|+||+|.+|.+.++|++.+. .++..+.++..++=.|++++|..
T Consensus 323 r~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilasl 396 (427)
T 3dwl_A 323 RKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQT 396 (427)
T ss_dssp HHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHHS
T ss_pred HHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeeccc
Confidence 113679999999999999999887651 11223457788999999999874
No 32
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=99.52 E-value=3.3e-14 Score=124.07 Aligned_cols=103 Identities=13% Similarity=0.217 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh--hhcCCCHHHHHHHHHHHHHHHHhhccCC---hHHHHHHHHHHHHHHHHHHHHH
Q 005807 573 ERKTLIDIRNNADTTIYSIEKSLGE--YREKIPGEVAKEIEDAVSDLRKAMAGED---IDGIKAKLDAANKAVSKIGQHM 647 (676)
Q Consensus 573 ~~~~~~~~~n~le~~i~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~wl~~~~---~~~~~~~~~~L~~~~~~i~~~~ 647 (676)
++|+++++||.||+|||.+++.|.+ +.++++++++++|...|+++++||+.++ .++|+.++++|++.+.+|++++
T Consensus 3 ~~re~ieakN~lEs~iy~~e~~l~e~~~~~kl~~eek~~i~~~i~e~~~wL~~~~~a~~e~i~~k~~eL~~~~~~i~~k~ 82 (113)
T 3lof_A 3 AAAERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGL 82 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCGGGBTTBCHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5788999999999999999999976 8899999999999999999999998864 8999999999999999999999
Q ss_pred hcCCCCCCC---CCCCCCCCCCCcccceecC
Q 005807 648 AGGSSDNSA---SGGSQGGDQAPEAEYEEVK 675 (676)
Q Consensus 648 ~~~~~~~~~---~g~~~~~~~~~~~~~~~~~ 675 (676)
|+++++++. +|+.+++++..+|+.|||+
T Consensus 83 y~~~~~~~~~~~~~~~~~~~~~~gp~~eevd 113 (113)
T 3lof_A 83 YQGAGGPGPGGFGAQGPKGGSGSGPTIEEVD 113 (113)
T ss_dssp HHC----------------------------
T ss_pred HHhccCCCCCCCCCCCCCCCCCCCCCCCCCC
Confidence 986432211 1222223345688999984
No 33
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=99.48 E-value=2.9e-14 Score=125.63 Aligned_cols=102 Identities=13% Similarity=0.185 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh--hhcCCCHHHHHHHHHHHHHHHHhhccC---ChHHHHHHHHHHHHHHHHHHHHHh
Q 005807 574 RKTLIDIRNNADTTIYSIEKSLGE--YREKIPGEVAKEIEDAVSDLRKAMAGE---DIDGIKAKLDAANKAVSKIGQHMA 648 (676)
Q Consensus 574 ~~~~~~~~n~le~~i~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~wl~~~---~~~~~~~~~~~L~~~~~~i~~~~~ 648 (676)
+|+++++||.+|+|||.+++.|.+ +.+++++++|++|...|+++++||+++ +.++|+.++++|++.+.+|..++|
T Consensus 13 ~re~iEarN~aEsliy~~e~~L~e~~~~dkl~~eek~~I~~~i~el~~~L~~~~~ad~e~ik~k~~eL~~~~~~i~~k~y 92 (120)
T 2p32_A 13 GLVPRGSHMGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISKLY 92 (120)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTCTTTGGGSCHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhchhhhccCCHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456789999999999999999976 788999999999999999999999865 689999999999999999999999
Q ss_pred cCCCCCCCC-CCCCCCCCCCcccceecC
Q 005807 649 GGSSDNSAS-GGSQGGDQAPEAEYEEVK 675 (676)
Q Consensus 649 ~~~~~~~~~-g~~~~~~~~~~~~~~~~~ 675 (676)
+++++++++ |+.+++++.++++.|||+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~ee~d 120 (120)
T 2p32_A 93 QSAGGAPPGAAPGGAAGGAGGPTIEEVD 120 (120)
T ss_dssp CC--------------------------
T ss_pred HhccCCCCCCCCCCCCCCCCCCCCCCCC
Confidence 654433332 333334445678888885
No 34
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=99.34 E-value=1.3e-12 Score=114.06 Aligned_cols=99 Identities=13% Similarity=0.220 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHHHHHHHHh--hhhcCCCHHHHHHHHHHHHHHHHhhccC---ChHHHHHHHHHHHHHHHHHHHHHhcCC
Q 005807 577 LIDIRNNADTTIYSIEKSLG--EYREKIPGEVAKEIEDAVSDLRKAMAGE---DIDGIKAKLDAANKAVSKIGQHMAGGS 651 (676)
Q Consensus 577 ~~~~~n~le~~i~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~wl~~~---~~~~~~~~~~~L~~~~~~i~~~~~~~~ 651 (676)
++++||.+|+|||.+++.|. ++.+++++++|++|...|+++++||+.+ +.++|+.++++|++.+.+|..++|+.+
T Consensus 2 l~EarN~aE~~iy~~e~~L~~~e~~~kl~~~ek~~i~~~i~~l~~~L~~~~~ad~~~i~~~~~~L~~~~~~i~~~~~~~~ 81 (113)
T 1ud0_A 2 VPRGSHMLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSA 81 (113)
T ss_dssp --CCHHHHHHHHHHHHHHHTSGGGTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS
T ss_pred hHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 56789999999999999997 6888999999999999999999999854 588999999999999999999999644
Q ss_pred CCCCCC--CC------CCCCCCCCcccceecC
Q 005807 652 SDNSAS--GG------SQGGDQAPEAEYEEVK 675 (676)
Q Consensus 652 ~~~~~~--g~------~~~~~~~~~~~~~~~~ 675 (676)
++++++ |+ .+++++.+++..|||+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee~d 113 (113)
T 1ud0_A 82 GGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 113 (113)
T ss_dssp CCCCCC--------------------------
T ss_pred cCCCCCCCCCCCCcccCCCCCCCCCCCcccCC
Confidence 332221 22 2222334578888875
No 35
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=99.26 E-value=2.2e-12 Score=137.06 Aligned_cols=196 Identities=20% Similarity=0.213 Sum_probs=134.7
Q ss_pred HHHHHHHHHHHHc-CC--CeEEeeChhHHHHHhccccCCCC-eEEEEeeCCceeEEEEEEEeCCeEEEEEecCCCCcchH
Q 005807 200 AQRQATKDAGRIA-GL--DVQRIINEPTAAALSYGMNNKEG-LIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGE 275 (676)
Q Consensus 200 ~qr~~l~~Aa~~A-Gl--~~~~li~Ep~AAal~y~~~~~~~-~vlV~D~GgGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~ 275 (676)
.+-+.+.+|.+.+ || ++-. .||.||++++..+...+ .+.++||||||||++++.-..-.+ ......||+
T Consensus 368 ~~m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTeDE~eLGvaiIDmGGGTTd~sVf~~G~lv~-----a~~ip~gG~ 440 (610)
T 2d0o_A 368 LQMAMIAREIEQKLNIDVQIGG--AEAEAAILGALTTPGTTRPLAILDLGAGSTDASIINPKGDII-----ATHLAGAGD 440 (610)
T ss_dssp CCHHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECTTCCEE-----EEEEECSHH
T ss_pred HHHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEEE-----EEEeccchH
Confidence 4478899999999 99 6655 99999999988776656 899999999999999965443332 233678999
Q ss_pred HHHHHHHHHHHHH-hhhhccCCCccCHHHHHHHHHHHHHHHHHcCCC----------Cceeeec--cccccCCCCCe---
Q 005807 276 DFDNALLEFLVSE-FKRTERIDLSQDKLALQRLRESAEKAKIELSST----------SQTEINL--PFITADASGAK--- 339 (676)
Q Consensus 276 ~~D~~l~~~l~~~-~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~----------~~~~~~i--~~~~~~~~g~~--- 339 (676)
+++..|..-|.-. + ..||++|. .... +...+.+ +.+....-. .
T Consensus 441 ~VT~DIA~~Lgt~d~-------------------~~AErIK~-YG~A~ve~lf~~~dede~Iev~~~~lgp~~~~-Rv~~ 499 (610)
T 2d0o_A 441 MVTMIIARELGLEDR-------------------YLAEEIKK-YPLAKVESLFHLRHEDGSVQFFSTPLPPAVFA-RVCV 499 (610)
T ss_dssp HHHHHHHHHHTCCCH-------------------HHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTT-CEEE
T ss_pred HHHHHHHHHhCCCCH-------------------HHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceee-eeec
Confidence 9999887765432 2 57899998 5432 1122333 222211000 1
Q ss_pred ---eeEEEEcHHH--HHHHHhHHHHHHHHH--HHHHHHHcCC-----CcCCCcEEEEEcCCcCcHHHHHHHHHHhCC-CC
Q 005807 340 ---HLNITLTRSK--FETLVNHLIERTKAP--CKNCLKDANI-----TIKDVDEVLLVGGMTRVPKVQEIVTEIFGK-SP 406 (676)
Q Consensus 340 ---~~~~~itr~~--fe~~~~~~v~~i~~~--i~~~l~~~~~-----~~~~i~~ViLvGG~s~~p~i~~~l~~~fg~-~~ 406 (676)
..-..| +.+ +|+ ++-+-+++.+. +.+.|+..+. ...+|..|+|+||+|.++.+.++.++.|+. ++
T Consensus 500 ~~~~~L~~I-~pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~~y~V 577 (610)
T 2d0o_A 500 VKADELVPL-PGDLALEK-VRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHYRL 577 (610)
T ss_dssp ECSSCEEEC-CTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTTTSSC
T ss_pred ccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCe
Confidence 112355 566 776 55555554444 2334554332 245679999999999999999999999987 43
Q ss_pred C-------CCCCcchhHhhHHHHHhh
Q 005807 407 S-------KGVNPDEAVALGAAIQGG 425 (676)
Q Consensus 407 ~-------~~~~p~~aVa~GAal~a~ 425 (676)
. ....|..|+|.|.+++.+
T Consensus 578 RiGrP~~~gv~gP~fAtAvGLlly~~ 603 (610)
T 2d0o_A 578 VAGRGNIRGSEGPRNAVATGLILSWH 603 (610)
T ss_dssp EEEECCGGGTSTTSCHHHHHHHHHHH
T ss_pred EEecCCccccCCCcHHHHHHHHHHHh
Confidence 2 245899999999998764
No 36
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=99.24 E-value=3.6e-12 Score=135.97 Aligned_cols=194 Identities=19% Similarity=0.213 Sum_probs=134.0
Q ss_pred HHHHHHHHHHc-CC--CeEEeeChhHHHHHhccccCCCC-eEEEEeeCCceeEEEEEEEeCCeEEEEEecCCCCcchHHH
Q 005807 202 RQATKDAGRIA-GL--DVQRIINEPTAAALSYGMNNKEG-LIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDF 277 (676)
Q Consensus 202 r~~l~~Aa~~A-Gl--~~~~li~Ep~AAal~y~~~~~~~-~vlV~D~GgGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~ 277 (676)
-+.+.+|.+.+ || ++-. .||.||++++..+...+ .+.++||||||||++++.-..-.+ ......||+++
T Consensus 372 m~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTedE~elGvaiIDmGgGTTd~sVf~~g~lv~-----a~~ip~gG~~V 444 (607)
T 1nbw_A 372 MQVIARELSARLQTEVVVGG--VEANMAIAGALTTPGCAAPLAILDLGAGSTDAAIVNAEGQIT-----AVHLAGAGNMV 444 (607)
T ss_dssp SCCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECSSSCEE-----EEEEECCHHHH
T ss_pred HHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEEE-----EEEeccchHHH
Confidence 56688899999 99 5544 99999999988776656 899999999999999975444332 33367899999
Q ss_pred HHHHHHHHHHH-hhhhccCCCccCHHHHHHHHHHHHHHHHHcCCC----------Cceeeec--cccccCCCCCe-----
Q 005807 278 DNALLEFLVSE-FKRTERIDLSQDKLALQRLRESAEKAKIELSST----------SQTEINL--PFITADASGAK----- 339 (676)
Q Consensus 278 D~~l~~~l~~~-~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~----------~~~~~~i--~~~~~~~~g~~----- 339 (676)
+..|..-|.-. + ..||++|. .... +...+.+ +.+....-. .
T Consensus 445 T~DIA~~Lg~~d~-------------------~~AErIK~-YG~A~~e~lf~~~dede~Iev~~~~lgp~~~~-R~~~~~ 503 (607)
T 1nbw_A 445 SLLIKTELGLEDL-------------------SLAEAIKK-YPLAKVESLFSIRHENGAVEFFREALSPAVFA-KVVYIK 503 (607)
T ss_dssp HHHHHHHHTCSCH-------------------HHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTT-CEEEEE
T ss_pred HHHHHHHhCCCCH-------------------HHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceee-eeeccc
Confidence 99887765432 2 57899998 5432 1122333 222211000 1
Q ss_pred -eeEEEEcHHH--HHHHHhHHHHHHHHH--HHHHHHHcCCC-----cCCCcEEEEEcCCcCcHHHHHHHHHHhCC-CCC-
Q 005807 340 -HLNITLTRSK--FETLVNHLIERTKAP--CKNCLKDANIT-----IKDVDEVLLVGGMTRVPKVQEIVTEIFGK-SPS- 407 (676)
Q Consensus 340 -~~~~~itr~~--fe~~~~~~v~~i~~~--i~~~l~~~~~~-----~~~i~~ViLvGG~s~~p~i~~~l~~~fg~-~~~- 407 (676)
..-..| +.+ +|+ ++-+-+++.+. +...|+..+.. ..+|..|+|+||+|.++.+.++.++.|+. ++.
T Consensus 504 ~~~L~~I-~~R~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~~VRi 581 (607)
T 1nbw_A 504 EGELVPI-DNASPLEK-IRLVRRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHYGVVA 581 (607)
T ss_dssp TTEEEEE-CCSSCHHH-HHHHHHHHHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTTTCEE
T ss_pred ccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCeEE
Confidence 112345 556 776 55555555543 45557776542 34679999999999999999999999976 321
Q ss_pred ------CCCCcchhHhhHHHHHhh
Q 005807 408 ------KGVNPDEAVALGAAIQGG 425 (676)
Q Consensus 408 ------~~~~p~~aVa~GAal~a~ 425 (676)
....|..|+|.|.+++.+
T Consensus 582 GrP~~~g~~gP~fAtAvGLlly~~ 605 (607)
T 1nbw_A 582 GQGNIRGTEGPRNAVATGLLLAGQ 605 (607)
T ss_dssp EECCGGGTSCSCCHHHHHHHHHHH
T ss_pred ecCCccccCCchHHHHHHHHHhhh
Confidence 245899999999998643
No 37
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=99.23 E-value=7.4e-11 Score=133.78 Aligned_cols=111 Identities=17% Similarity=0.272 Sum_probs=82.6
Q ss_pred HHHHHHHHH-HHhCCCCC-----eEEEEeCCCCCHHHHHHHHHH-HHHcCCCeEEeeChhHHHHHhccccCCCCeEEEEe
Q 005807 171 LTKMKETAE-SYLGKSVS-----EAVITVPAYFNDAQRQATKDA-GRIAGLDVQRIINEPTAAALSYGMNNKEGLIAVFD 243 (676)
Q Consensus 171 L~~l~~~a~-~~l~~~~~-----~~VITVPa~~~~~qr~~l~~A-a~~AGl~~~~li~Ep~AAal~y~~~~~~~~vlV~D 243 (676)
+..|.+++- .+|+.... .+++|.|..++...|+.|.+. .+..|++.+.++.++.+|++++|.. +-+|||
T Consensus 177 ~e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~~----tglVVD 252 (593)
T 4fo0_A 177 IEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGLS----STCIVD 252 (593)
T ss_dssp HHHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTCS----EEEEEE
T ss_pred HHHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCCC----ceEEEE
Confidence 344555543 45665443 499999999999999888666 5678999999999999999988754 569999
Q ss_pred eCCceeEEEEEEEeCCeEEEEEecCCCCcchHHHHHHHHHHHHHH
Q 005807 244 LGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSE 288 (676)
Q Consensus 244 ~GgGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l~~~l~~~ 288 (676)
+|.+.|.++-+. +|..- ........+||.++++.|.++|..+
T Consensus 253 iG~~~T~v~PV~--dG~~l-~~~~~rl~~GG~~lt~~L~~lL~~~ 294 (593)
T 4fo0_A 253 VGDQKTSVCCVE--DGVSH-RNTRLCLAYGGSDVSRCFYWLMQRA 294 (593)
T ss_dssp ECSSCEEEEEEE--SSCBC-GGGCEEESCCHHHHHHHHHHHHHHT
T ss_pred eCCCceeeeeeE--CCEEe-hhheEEecccHHHHHHHHHHHHHhc
Confidence 999999988754 33210 0011125799999999999988754
No 38
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.82 E-value=1.4e-07 Score=95.33 Aligned_cols=73 Identities=18% Similarity=0.177 Sum_probs=56.5
Q ss_pred HHHHhHHHHHHHHHHHHHHHHcCCCcCCCcEEEEEcCCcCcHHHHHHHHHHhCCCCCCCCCcchhHhhHHHHHhhhc
Q 005807 351 ETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIFGKSPSKGVNPDEAVALGAAIQGGIL 427 (676)
Q Consensus 351 e~~~~~~v~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~fg~~~~~~~~p~~aVa~GAal~a~~l 427 (676)
++++..+++.+...+.+.++..+. .+.|+++||.+++|.+++.+++.++.++..+.++..+.|+|||++|...
T Consensus 185 ~di~~av~e~Va~~i~~~~~~~~~----~~~i~~~GG~a~n~~~~~~~~~~lg~~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 185 IDIIAGIHRSVASRVIGLANRVGI----VKDVVMTGGVAQNYGVRGALEEGLGVEIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCC----CSSEEEESGGGGCHHHHHHHHHHHCSCEECCGGGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCC----CCeEEEeCccccCHHHHHHHHHHHCCCeEeCCCcchHhHHHHHHHHHHh
Confidence 444555555555555555554321 3789999999999999999999999988888889889999999998753
No 39
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=98.59 E-value=5.1e-07 Score=99.71 Aligned_cols=202 Identities=13% Similarity=0.154 Sum_probs=108.5
Q ss_pred HHHHHHcCC----CeEEeeChhHHHHHhccccCCCCeEEEEeeCCceeEEEEEEE---e-CC-eEEE------EEecCCC
Q 005807 206 KDAGRIAGL----DVQRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSVLEI---S-NG-VFEV------KATNGDT 270 (676)
Q Consensus 206 ~~Aa~~AGl----~~~~li~Ep~AAal~y~~~~~~~~vlV~D~GgGT~Dvsv~~~---~-~~-~~~v------~~~~g~~ 270 (676)
.++++..|| +++.-..+..||+++.+.... ..+++=+|-+++-..+..- . .+ .+.. ....+..
T Consensus 219 ~~~a~~~Gl~~g~pV~~g~~D~~aa~~g~g~~~~--g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 296 (504)
T 3ll3_A 219 TEYVKKLGIDSDTKIILGASDGYLSTIGVNAIDS--DHCALNVGTSGAIRTIVDQPKIDPSASYFCYPADKTHYLLGGPV 296 (504)
T ss_dssp HHHHHHHTCCTTCEEEEEEEHHHHHHHTTTCCST--TEEEEEESSSEEEEEEESSCCCCTTCCSEEEEEETTEEEEEEEE
T ss_pred HHHHHhcCCCcCCCEEEEccHHHHHHHhCCCCCC--CcEEEEechhhhheeeCCCcccCCCCceEEEEeCCCeEEEEeeh
Confidence 345565555 577778888899988775543 2344455555543333210 0 01 1110 0011224
Q ss_pred CcchHHHHHHHHHHHHHHhhhhccCCCccCHHHHHHHHHHHHHHHHHcCCCCceeeeccccccCCC-----CCee----e
Q 005807 271 FLGGEDFDNALLEFLVSEFKRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADAS-----GAKH----L 341 (676)
Q Consensus 271 ~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~~~~~~~-----g~~~----~ 341 (676)
+.||..+ +|+.+.+.... .. ...+...+++ ........+.+|++..... .... +
T Consensus 297 ~~~G~~~-----~W~~~~~~~~~-----~~---~~~~~~~a~~----~~~g~~gl~~~P~~~Ger~P~~d~~arg~~~Gl 359 (504)
T 3ll3_A 297 NNGGIVF-----NWARQTLFDAD-----ET---PQDFLDVAQT----APAGSRNLIFLPYLGGERAPIWDANARGSFVGL 359 (504)
T ss_dssp SCSHHHH-----HHHHHHHTCTT-----CC---HHHHHHHHHT----SCTTGGGCEEECCTTCBCTTTCBTTCCEEEEEE
T ss_pred hhHHHHH-----HHHHHHhccch-----hH---HHHHHHHHhc----CCCCCCCeEEecCccCCCCCCCCCccCeEEECC
Confidence 5567644 57777664211 01 1122222221 1222344456666542211 0011 1
Q ss_pred EEEEcHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcCCCcEEEEEcCCcCcHHHHHHHHHHhCCCCCCCCCcchhHhhHHH
Q 005807 342 NITLTRSKFETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIFGKSPSKGVNPDEAVALGAA 421 (676)
Q Consensus 342 ~~~itr~~fe~~~~~~v~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~fg~~~~~~~~p~~aVa~GAa 421 (676)
+..-++.+| ++-+++.+.-.++..++...-....++.|.++||+++++.+.+++.+.||.++.. ..+.++.|+|||
T Consensus 360 ~~~~~~~~l---~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~-~~~~e~~alGaA 435 (504)
T 3ll3_A 360 TRMHQKPEM---ARAVIEGIIFNLYDAASNLIKNTKKPVAINATGGFLKSDFVRQLCANIFNVPIVT-MKEQQSGTLAAM 435 (504)
T ss_dssp CTTCCHHHH---HHHHHHHHHHHHHHHHHHHHTTSCCCSEEEEESGGGCSHHHHHHHHHHHTSCEEE-ESCSCHHHHHHH
T ss_pred CCCCCHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCchhcCHHHHHHHHHhhCCeEEe-cCCCCchhHHHH
Confidence 122345554 4444444444444443332111135799999999999999999999999997755 446779999999
Q ss_pred HHhhhccCC
Q 005807 422 IQGGILRGD 430 (676)
Q Consensus 422 l~a~~l~~~ 430 (676)
+.|+.-.+.
T Consensus 436 ~lA~~a~G~ 444 (504)
T 3ll3_A 436 FLARQALGL 444 (504)
T ss_dssp HHHHHHTTS
T ss_pred HHHHHHcCc
Confidence 999876554
No 40
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=98.44 E-value=8.3e-07 Score=98.20 Aligned_cols=206 Identities=16% Similarity=0.155 Sum_probs=112.5
Q ss_pred HHHHHHcCC----CeEEeeChhHHHHHhccccCCCCeEEEEeeCCceeEEEEEE-E---e-C-CeEEEEEe--------c
Q 005807 206 KDAGRIAGL----DVQRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSVLE-I---S-N-GVFEVKAT--------N 267 (676)
Q Consensus 206 ~~Aa~~AGl----~~~~li~Ep~AAal~y~~~~~~~~vlV~D~GgGT~Dvsv~~-~---~-~-~~~~v~~~--------~ 267 (676)
.++++..|| +++.-..+..||+++.+....+. +++-+|-+++-..+.. - . . +.+..... .
T Consensus 223 ~~~a~~~Gl~~g~pV~~g~~D~~aa~~g~g~~~~g~--~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (511)
T 3hz6_A 223 ALAARQTGFVSGTPVLCGLGDAGAATLGVGVLDDED--AYLHLGTTGWLARLTQTDPVGDMPVGTIFRLAGIIAGKTLQV 300 (511)
T ss_dssp HHHHHHHCCCTTCEEECCEEHHHHHHHHTTCCSTTC--EEEEESSSEEEEEEEECCCCCSCCSSCCEEECSSSTTEEEEE
T ss_pred HHHHHhhCCCCCCeEEEECchHHHHHHhCCCCCCCc--EEEEecchhhheeecCCeecccCCCCceEEEEEecCCceEEE
Confidence 355666565 46667788888888877654332 4444566555444433 1 1 1 11111110 0
Q ss_pred CCCCcchHHHHHHHHHHHHHHhhhhccCCCccCHHHHHHHHHHHHHHHHHcCCCCceeeeccccccCCCC-----Ce---
Q 005807 268 GDTFLGGEDFDNALLEFLVSEFKRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASG-----AK--- 339 (676)
Q Consensus 268 g~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~~~~~~~g-----~~--- 339 (676)
+....||. .++|+.+.|... .. . .+..|.+.+++..... ......+.+|++...... ..
T Consensus 301 g~~~~~G~-----~~~W~~~~~~~~--~~--~---~~~~l~~~a~~~~~g~-~~~~gl~~~P~~~Ger~P~~d~~arg~~ 367 (511)
T 3hz6_A 301 APVLNAGN-----ILQWALTLVGHR--PG--E---DCAEYFHMAAAEVQGV-TVPDGLLFVPYLHAERCPVELPAPRGAL 367 (511)
T ss_dssp EEESSSHH-----HHHHHGGGGTCC--TT--S---CSHHHHHHHHHHHTTC-CCCTTCEEEEESSCBCSSSCBSSCEEEE
T ss_pred eehhhHHH-----HHHHHHHHhccc--cc--c---cHHHHHHHHHhCCCCC-CCCCCEEEeCCCCCCCCCCCCCccceEE
Confidence 22344553 456766655310 00 0 1334445555543220 002333455554322110 01
Q ss_pred -eeEEEEcHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcCCCcEEEEEcCCcCcHHHHHHHHHHhCCCCCCCCCcchhHhh
Q 005807 340 -HLNITLTRSKFETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIFGKSPSKGVNPDEAVAL 418 (676)
Q Consensus 340 -~~~~~itr~~fe~~~~~~v~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~fg~~~~~~~~p~~aVa~ 418 (676)
.++..-++.+| ++-+++.+.-.++..++...- .. ++.|.++||+++++.+.+++.+.||.++.....+.++.|+
T Consensus 368 ~Gl~~~~~~~~l---~RAvlEgia~~~~~~~~~l~~-g~-~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~~~e~~al 442 (511)
T 3hz6_A 368 LGVTGATTRAQI---LLAVLEGAALSLRWCAELLGM-EK-VGLLKVVGGGARSEAWLRMIADNLNVSLLVKPDAHLHPLR 442 (511)
T ss_dssp ECCCTTCCHHHH---HHHHHHHHHHHHHHHHHHHTG-GG-CCEEEEESGGGGCHHHHHHHHHHHTCEEEECCCGGGHHHH
T ss_pred EcCCCCCCHHHH---HHHHHHHHHHHHHHHHHHHhc-CC-CCEEEEeCchhcCHHHHHHHHHHHCCeeEEecCCCCchHH
Confidence 11222345554 455555555555555544332 34 7899999999999999999999999987234458899999
Q ss_pred HHHHHhhhccCCC
Q 005807 419 GAAIQGGILRGDV 431 (676)
Q Consensus 419 GAal~a~~l~~~~ 431 (676)
|||+.|+.-.+..
T Consensus 443 GaA~lA~~a~G~~ 455 (511)
T 3hz6_A 443 GLAALAAVELEWS 455 (511)
T ss_dssp HHHHHHHHHTTSC
T ss_pred HHHHHHHHHhCCc
Confidence 9999998766643
No 41
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=98.38 E-value=1.1e-06 Score=97.71 Aligned_cols=84 Identities=18% Similarity=0.245 Sum_probs=57.3
Q ss_pred EcHHHHHHHH-hHHHHHHHHHHHHHHHHcCCCcCCCcEEEEEcCCcCcHHHHHHHHHHhCCCCCCCCCcchhHhhHHHHH
Q 005807 345 LTRSKFETLV-NHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIFGKSPSKGVNPDEAVALGAAIQ 423 (676)
Q Consensus 345 itr~~fe~~~-~~~v~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~fg~~~~~~~~p~~aVa~GAal~ 423 (676)
-+|.+|-..+ +.+.-.+...++..-+..+. .++.|.++||+++++.+.+++.+.||.++..+ ...|+.|+|||+.
T Consensus 371 ~~~~~i~RAvlEgia~~~r~~le~l~~~~g~---~~~~i~v~GGgaks~~~~Qi~ADvlg~pV~~~-~~~E~~alGAA~l 446 (526)
T 3ezw_A 371 VNANHIIRATLESIAYQTRDVLEAMQADSGI---RLHALRVDGGAVANNFLMQFQSDILGTRVERP-EVREVTALGAAYL 446 (526)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEECchhhCHHHHHHHHHHHCCEEEeC-CCCchHHHHHHHH
Confidence 4465553222 22222333333333334554 46899999999999999999999999877554 4568899999999
Q ss_pred hhhccCCCc
Q 005807 424 GGILRGDVK 432 (676)
Q Consensus 424 a~~l~~~~~ 432 (676)
|+.-.|..+
T Consensus 447 A~~a~G~~~ 455 (526)
T 3ezw_A 447 AGLAVGFWQ 455 (526)
T ss_dssp HHHHTTSSS
T ss_pred HHHHhCCCC
Confidence 998766443
No 42
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=98.30 E-value=1.1e-06 Score=97.12 Aligned_cols=200 Identities=21% Similarity=0.242 Sum_probs=105.7
Q ss_pred HHHHHHcCC----CeEEeeChhHHHHHhccccCCCCeEEEEeeCCceeEEEEEEE---eCCeEEEEEe--------cCCC
Q 005807 206 KDAGRIAGL----DVQRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSVLEI---SNGVFEVKAT--------NGDT 270 (676)
Q Consensus 206 ~~Aa~~AGl----~~~~li~Ep~AAal~y~~~~~~~~vlV~D~GgGT~Dvsv~~~---~~~~~~v~~~--------~g~~ 270 (676)
.++++..|| +++.-..+..||+++.+....+ .+++=+|-+++-..+..- ... +..... .+..
T Consensus 225 ~~~a~~~Gl~~g~pV~~g~~D~~aa~~g~g~~~~g--~~~~s~GTs~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~g~~ 301 (508)
T 3ifr_A 225 AEAAALTGLPTGLPVYGGAADHIASALAAGITRPG--DVLLKFGGAGDIIVASATAKSDPR-LYLDYHLVPGLYAPNGCM 301 (508)
T ss_dssp HHHHHHHCCCTTCEEECCEEHHHHHHHHTTCCSTT--EEEEEESSSEEEEECBSCCCCBTT-BBCCBCSSTTCBCCEEEE
T ss_pred HHHHHHhCCCCCCeEEEECchHHHHHHhCCCCCCC--cEEEEechhhhheeeCCCcccCCC-cceeeeecCCceEEechh
Confidence 356666665 4666677888888887765432 344445555544333210 111 000000 1112
Q ss_pred CcchHHHHHHHHHHHHHHhhhhccCCCccCHHHHHHHHHHHHHHHHHcCCCCceeeeccccccCC--------CC-Ceee
Q 005807 271 FLGGEDFDNALLEFLVSEFKRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADA--------SG-AKHL 341 (676)
Q Consensus 271 ~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~~~~~~--------~g-~~~~ 341 (676)
..||. .++|+.+.|.. .+. + ..+..|.+.+++ ........+.+|++.... .| ...+
T Consensus 302 ~~~G~-----~~~W~~~~~~~-~~~----~-~~~~~l~~~a~~----~~~~~~gl~flP~~~Ger~P~~d~~arg~~~Gl 366 (508)
T 3ifr_A 302 AATGS-----ALNWLAKLLAP-EAG----E-AAHAQLDALAAE----VPAGADGLVCLPYFLGEKTPIHDPFASGTFTGL 366 (508)
T ss_dssp SSSHH-----HHHHHHHHHST-TCT----T-HHHHHHHHHHHT----SCTTGGGCEEECCTTCCC----CCCCCCEEESC
T ss_pred hhhHH-----HHHHHHHHHhh-cCC----C-CCHHHHHHHHhc----CCCCCCCeEEecCCCCCCCCCCCCCcCEEEECC
Confidence 33443 45567666630 011 0 013334333332 122234445566543211 11 0111
Q ss_pred EEEEcHHHHHHHHhHHHHHHHHHH---HHHHHHcCCCcCCCcEEEEEcCCcCcHHHHHHHHHHhCCCCCCCCCcchhHhh
Q 005807 342 NITLTRSKFETLVNHLIERTKAPC---KNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIFGKSPSKGVNPDEAVAL 418 (676)
Q Consensus 342 ~~~itr~~fe~~~~~~v~~i~~~i---~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~fg~~~~~~~~p~~aVa~ 418 (676)
+..-++.+|- +-+++.+.-.+ -+.|++.+. .++.|.++||+++++.+.+++.+.||.++..+.. .++.|+
T Consensus 367 ~~~~~~~~l~---rAvlEgia~~~~~~~~~l~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~-~e~~al 439 (508)
T 3ifr_A 367 SLSHTRGHLW---RALLEAVALAFRHHVAVLDDIGH---APQRFFASDGGTRSRVWMGIMADVLQRPVQLLAN-PLGSAV 439 (508)
T ss_dssp CTTCCHHHHH---HHHHHHHHHHHHHHHHHHHHHTC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEEEC-CSTHHH
T ss_pred CCCCCHHHHH---HHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEeCCcccCHHHHHHHHHHhCCeEEecCC-CCchHH
Confidence 1223565553 33333333332 234444453 4689999999999999999999999998765543 568899
Q ss_pred HHHHHhhhccCC
Q 005807 419 GAAIQGGILRGD 430 (676)
Q Consensus 419 GAal~a~~l~~~ 430 (676)
|||+.|+.-.+.
T Consensus 440 GaA~lA~~a~G~ 451 (508)
T 3ifr_A 440 GAAWVAAIGGGD 451 (508)
T ss_dssp HHHHHHHHHTCS
T ss_pred HHHHHHHHHhCC
Confidence 999999876553
No 43
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=98.26 E-value=7.3e-06 Score=90.77 Aligned_cols=195 Identities=17% Similarity=0.168 Sum_probs=103.3
Q ss_pred HcCCCeEEeeChhHHHHHhccccCCCCeEEEEeeCCceeEEEEE-E---E-eCCeEEE----------EEecCCCCcchH
Q 005807 211 IAGLDVQRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSVL-E---I-SNGVFEV----------KATNGDTFLGGE 275 (676)
Q Consensus 211 ~AGl~~~~li~Ep~AAal~y~~~~~~~~vlV~D~GgGT~Dvsv~-~---~-~~~~~~v----------~~~~g~~~lGG~ 275 (676)
..|.+++....+-.||+++.+....+. +++=+|-+++-+... . . ..+.+.. ....+....||.
T Consensus 255 ~~g~pV~~g~~D~~aa~~g~g~~~~g~--~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~G~ 332 (520)
T 4e1j_A 255 GAAIPILGVAGDQQAATIGQACFKPGM--LKSTYGTGCFALLNTGKDMVRSKNRLLTTIAYRLDGETTYALEGSIFVAGA 332 (520)
T ss_dssp TSCCBEEEECCHHHHHHHHTTCCSTTC--EEEEESSSEEEEEECTTCCCCCSSSCEEEEEEEETTEEEEEEEEEESCSHH
T ss_pred CCCCeEEEECCcHHHHHHhCCCCCCCc--EEEEecCchheEEecCCccccCCCceeeEEeEecCCCceEEEcchHhhHHH
Confidence 468899988999999999887654432 333445443322221 0 0 0111110 111222345555
Q ss_pred HHHHHHHHHHHHHhhhhccCCCccCHHHHHHHHHHHHHHHHHcCCCCceeeeccccccCC--------CC-CeeeEEEEc
Q 005807 276 DFDNALLEFLVSEFKRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADA--------SG-AKHLNITLT 346 (676)
Q Consensus 276 ~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~~~~~~--------~g-~~~~~~~it 346 (676)
.++|+.+.+... . ....+.+.++.. . .....+.+|++.... .| ...++..-+
T Consensus 333 -----~~~W~~~~~~~~------~---~~~~l~~~a~~~----~-~~~gl~~lP~l~Ger~P~~d~~arg~~~Gl~~~~~ 393 (520)
T 4e1j_A 333 -----AVQWLRDGLKVI------K---AAPDTGSLAESA----D-PSQEVYLVPAFTGLGAPHWDPDARGAIFGMTRNTG 393 (520)
T ss_dssp -----HHHHHHHTTCCC--------------CHHHHHTS----C-TTCCCEEECCTTCBCTTTCBTTCCCEEEEECTTCC
T ss_pred -----HHHHHHHHcCCc------c---cHHHHHHHHhcC----C-CCCcEEEEcCccCCCCCCCCCCCCEEEecccCCCC
Confidence 566777665311 0 011222222221 1 233445567653221 11 011222234
Q ss_pred HHHHHHHHhHHHHHHHHHHHHH---HHHcCC-CcCCCcEEEEEcCCcCcHHHHHHHHHHhCCCCCCCCCcchhHhhHHHH
Q 005807 347 RSKFETLVNHLIERTKAPCKNC---LKDANI-TIKDVDEVLLVGGMTRVPKVQEIVTEIFGKSPSKGVNPDEAVALGAAI 422 (676)
Q Consensus 347 r~~fe~~~~~~v~~i~~~i~~~---l~~~~~-~~~~i~~ViLvGG~s~~p~i~~~l~~~fg~~~~~~~~p~~aVa~GAal 422 (676)
|.+|- +-+++.+.-.++.+ |++.+. .. .++.|.++||+++++.+.+++.+.||.++.. ..+.++.|+|||+
T Consensus 394 ~~~l~---RAvlEgia~~~r~~l~~l~~~~~~~g-~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~-~~~~e~~alGAA~ 468 (520)
T 4e1j_A 394 PAEFA---RAALEAVCYQTRDLLEAMHKDWRRNG-NDTVLRVDGGMVASDWTMQRLSDLLDAPVDR-PVILETTALGVAW 468 (520)
T ss_dssp HHHHH---HHHHHHHHHHHHHHHHHHHHHCC------CCEEEESGGGGCHHHHHHHHHHHTSCEEE-ESCCCHHHHHHHH
T ss_pred HHHHH---HHHHHHHHHHHHHHHHHHHHhhccCC-CcceEEEeCccccCHHHHHHHHHHhCCeEEe-cCCCccHHHHHHH
Confidence 65543 34444443333333 333200 01 4689999999999999999999999997764 4467799999999
Q ss_pred HhhhccCCC
Q 005807 423 QGGILRGDV 431 (676)
Q Consensus 423 ~a~~l~~~~ 431 (676)
.|+.-.+..
T Consensus 469 lA~~a~G~~ 477 (520)
T 4e1j_A 469 LAGSRAGVW 477 (520)
T ss_dssp HHHHHHTSS
T ss_pred HHHHHcCCc
Confidence 999766643
No 44
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=98.22 E-value=3e-06 Score=93.68 Aligned_cols=77 Identities=22% Similarity=0.413 Sum_probs=55.4
Q ss_pred cHHHHHHHHhHHHHHHHHHHHH---HHHHcCCCcCCCcEEEEEcCCcCcHHHHHHHHHHhCCCCCCCCCcchhHhhHHHH
Q 005807 346 TRSKFETLVNHLIERTKAPCKN---CLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIFGKSPSKGVNPDEAVALGAAI 422 (676)
Q Consensus 346 tr~~fe~~~~~~v~~i~~~i~~---~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~fg~~~~~~~~p~~aVa~GAal 422 (676)
++.+| ++-+++.+.-.++. .|++.+. .++.|+++||+++++.+.+++.+.||.++.. ..+.++.|+|||+
T Consensus 395 ~~~~l---~RAvlEgia~~~r~~l~~l~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~-~~~~e~~alGAA~ 467 (515)
T 3i8b_A 395 TRENL---ARAFVEGLLCSQRDCLELIRSLGA---SITRILLIGGGAKSEAIRTLAPSILGMDVTR-PATDEYVAIGAAR 467 (515)
T ss_dssp SHHHH---HHHHHHHHHHHHHHHHHHHHHTTC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEE-ECCCCHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHcCC---CCCEEEEECchhcCHHHHHHHHHHhCCceEe-cCCcccHHHHHHH
Confidence 55554 44444444333333 4444443 4689999999999999999999999987655 4466789999999
Q ss_pred HhhhccC
Q 005807 423 QGGILRG 429 (676)
Q Consensus 423 ~a~~l~~ 429 (676)
.|+.-.+
T Consensus 468 lA~~a~G 474 (515)
T 3i8b_A 468 QAAWVLS 474 (515)
T ss_dssp HHHHHHH
T ss_pred HHHHHcC
Confidence 9987554
No 45
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=98.20 E-value=2.8e-05 Score=85.88 Aligned_cols=192 Identities=19% Similarity=0.237 Sum_probs=104.2
Q ss_pred cCCCeEEeeChhHHHHHhccccCCCCeEEEEeeCCceeEEEEEEE-----eCCeEEE----------EEecCCCCcchHH
Q 005807 212 AGLDVQRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSVLEI-----SNGVFEV----------KATNGDTFLGGED 276 (676)
Q Consensus 212 AGl~~~~li~Ep~AAal~y~~~~~~~~vlV~D~GgGT~Dvsv~~~-----~~~~~~v----------~~~~g~~~lGG~~ 276 (676)
.|.+++....+..||+++.+....+. +++=+|-+++-.....- ..+.+.. ....+..+.||.
T Consensus 236 ~g~pV~~g~~D~~aa~~g~g~~~~g~--~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~- 312 (506)
T 3h3n_X 236 SEVPIAGMAGDQQAALFGQMAFEKGM--IKNTYGTGAFIVMNTGEEPQLSDNDLLTTIGYGINGKVYYALEGSIFVAGS- 312 (506)
T ss_dssp CCCEEEEEEEHHHHHHHHTTCCSTTC--EEEEESSSEEEEEEEETCCCSCCTTSEEEEEEEETTEEEEEEEEEECCSSH-
T ss_pred CCCeEEEECCcHHHHHHhCCCCCCCc--EEEEecchheeeeecCCccccCCCceEEEeeeecCCCCEEEEecchhhHHH-
Confidence 68888888889999999887654433 33344544432222110 0111110 111222345665
Q ss_pred HHHHHHHHHHHHhhhhccCCCccCHHHHHHHHHHHHHHHHHcCCCCceeeeccccccCC--------CC-CeeeEEEEcH
Q 005807 277 FDNALLEFLVSEFKRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADA--------SG-AKHLNITLTR 347 (676)
Q Consensus 277 ~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~~~~~~--------~g-~~~~~~~itr 347 (676)
+++|+.+.+... .+ ...+...++. ... ....+.+|++.... .| ...++..-++
T Consensus 313 ----~~~W~~~~~~~~------~~---~~~l~~~a~~----~~~-~~gl~~~P~~~Ger~P~~d~~arg~~~Gl~~~~~~ 374 (506)
T 3h3n_X 313 ----AIQWLRDGLRMI------ET---SPQSEELAAK----AKG-DNEVYVVPAFTGLGAPYWDSEARGAVFGLTRGTTK 374 (506)
T ss_dssp ----HHHHHHHTSCCC------SS---TTHHHHHHTT----CCS-CSCCEEECCTTCBCTTTCBTTCCCEEECCCTTCCH
T ss_pred ----HHHHHHHHcCCC------Cc---HHHHHHHHhc----CCC-CCceEEeccccCCCCCccCCCCCEEEEccCCCCCH
Confidence 566777665311 00 1112222211 112 23445566653211 11 0112223356
Q ss_pred HHHHHHHhHHHHHHHHHHHH---HHHH-cCCCcCCCcEEEEEcCCcCcHHHHHHHHHHhCCCCCCCCCcchhHhhHHHHH
Q 005807 348 SKFETLVNHLIERTKAPCKN---CLKD-ANITIKDVDEVLLVGGMTRVPKVQEIVTEIFGKSPSKGVNPDEAVALGAAIQ 423 (676)
Q Consensus 348 ~~fe~~~~~~v~~i~~~i~~---~l~~-~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~fg~~~~~~~~p~~aVa~GAal~ 423 (676)
.+|- +-+++.+.-.++. .|++ .+. .++.|.++||+++++.+.+++.+.||.++.. ..+.++.|+|||+.
T Consensus 375 ~~l~---RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~-~~~~e~~alGaA~l 447 (506)
T 3h3n_X 375 EDFV---RATLQAVAYQSKDVIDTMKKDSGI---DIPLLKVDGGAAKNDLLMQFQADILDIDVQR-AANLETTALGAAYL 447 (506)
T ss_dssp HHHH---HHHHHHHHHHHHHHHHHHHHHHCS---CCCEEEEESGGGGCHHHHHHHHHHHTSEEEE-CSSSCHHHHHHHHH
T ss_pred HHHH---HHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEecccccCHHHHHHHHHHhCCeEEe-cCCCcchhHHHHHH
Confidence 5553 3344433333333 3333 353 4689999999999999999999999987654 45678999999999
Q ss_pred hhhccCCC
Q 005807 424 GGILRGDV 431 (676)
Q Consensus 424 a~~l~~~~ 431 (676)
|+.-.+..
T Consensus 448 A~~a~G~~ 455 (506)
T 3h3n_X 448 AGLAVGFW 455 (506)
T ss_dssp HHHHTTSS
T ss_pred HHHHhCcc
Confidence 98766543
No 46
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=98.04 E-value=2.7e-05 Score=85.86 Aligned_cols=128 Identities=15% Similarity=0.232 Sum_probs=91.5
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHH-HHcCCCeEEeeChhHHHHHhccccCCCCeEEEEeeCCceeEEEEEEEeCCeEEEEE
Q 005807 187 SEAVITVPAYFNDAQRQATKDAG-RIAGLDVQRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSVLEISNGVFEVKA 265 (676)
Q Consensus 187 ~~~VITVPa~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~AAal~y~~~~~~~~vlV~D~GgGT~Dvsv~~~~~~~~~v~~ 265 (676)
..++||.|..++...|+.|.+.+ +..|++.+.++.+|.+|++++|. ...-+|+|+|+|+|+++.+. +|.. +..
T Consensus 222 ~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl---~ttGLVVDiG~g~T~VvPV~--eG~v-l~~ 295 (655)
T 4am6_A 222 YKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI---STSTCVVNIGAAETRIACVD--EGTV-LEH 295 (655)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC---SSCEEEEEECSSCEEEEEEE--TTEE-CGG
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC---CCceEEEcCCCceEEEEEEe--CCEE-Ehh
Confidence 46999999999999999998887 56999999999999999999875 12569999999999999863 3321 111
Q ss_pred ecCCCCcchHHHHHHHHHHHHHHhhhhccCCCccCHHHHHHHHHHHHHHHHHcCCCCcee
Q 005807 266 TNGDTFLGGEDFDNALLEFLVSEFKRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTE 325 (676)
Q Consensus 266 ~~g~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~ 325 (676)
......+||.++|..|.++|..+--......+.. ..=...++.+|+.++.....+
T Consensus 296 ai~rL~iGG~dLT~yL~kLL~~rgypy~~~~f~t-----~~e~eiVrdIKEk~CyVs~~D 350 (655)
T 4am6_A 296 SAITLDYGGDDITRLFALFLLQSDFPLQDWKIDS-----KHGWLLAERLKKNFTTFQDAD 350 (655)
T ss_dssp GCEEESCCHHHHHHHHHHHHHHTTCSCCSCCTTS-----HHHHHHHHHHHHHHCCCCGGG
T ss_pred heeeecchHHHHHHHHHHHHHHcCCCccccCCCC-----cchHHHHHHHHHheEEEcccc
Confidence 1112589999999999999876421000111111 112356788999988774333
No 47
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=97.66 E-value=0.00044 Score=69.63 Aligned_cols=74 Identities=15% Similarity=0.163 Sum_probs=52.4
Q ss_pred cHHHHH-HHHhHHHHHHHHHHHHHHHHcCCCcCCCcEEEEEcC-CcCcHHHHHHHHHHh---CCCCCCCCCcchhHhhHH
Q 005807 346 TRSKFE-TLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGG-MTRVPKVQEIVTEIF---GKSPSKGVNPDEAVALGA 420 (676)
Q Consensus 346 tr~~fe-~~~~~~v~~i~~~i~~~l~~~~~~~~~i~~ViLvGG-~s~~p~i~~~l~~~f---g~~~~~~~~p~~aVa~GA 420 (676)
+++++- .++.-+.+++..+...+.+.. .++.|+++|| .+..|.+++.+++.+ +.++..+.+|..+.|.||
T Consensus 208 ~~eDIaasl~~sV~~~I~~la~~~a~~~-----~i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlGA 282 (287)
T 2ews_A 208 TPSNKLAAVIGVVGEVVTTMAITVAREF-----KTENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIGA 282 (287)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHHH
Confidence 454443 333344444444433333443 3467999999 899999999999985 577888999999999999
Q ss_pred HHHh
Q 005807 421 AIQG 424 (676)
Q Consensus 421 al~a 424 (676)
|+.+
T Consensus 283 aL~~ 286 (287)
T 2ews_A 283 LYLE 286 (287)
T ss_dssp HHTC
T ss_pred HHhC
Confidence 9874
No 48
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=97.38 E-value=0.0011 Score=68.50 Aligned_cols=69 Identities=14% Similarity=0.093 Sum_probs=50.7
Q ss_pred HHHHhHHHHHHHHHHHHHH----HHcCCCcCCCcEEEEEcC-CcCcHHHHHHHHHHhC------CCCCCCCCcchhHhhH
Q 005807 351 ETLVNHLIERTKAPCKNCL----KDANITIKDVDEVLLVGG-MTRVPKVQEIVTEIFG------KSPSKGVNPDEAVALG 419 (676)
Q Consensus 351 e~~~~~~v~~i~~~i~~~l----~~~~~~~~~i~~ViLvGG-~s~~p~i~~~l~~~fg------~~~~~~~~p~~aVa~G 419 (676)
++++..++..+.+.|.... +..+ ++.|+++|| .+..|.+++.|++.++ .++..+.+|..+-|.|
T Consensus 279 eDIa~gll~sVa~~I~~lA~l~A~~~~-----i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlG 353 (360)
T 2i7n_A 279 EDLARATLVTITNNIGSIARMCALNEN-----IDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVG 353 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT-----CCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHH
Confidence 4445555555554444332 3333 457999999 8999999999999973 5677788999999999
Q ss_pred HHHHh
Q 005807 420 AAIQG 424 (676)
Q Consensus 420 Aal~a 424 (676)
||+.+
T Consensus 354 AaL~~ 358 (360)
T 2i7n_A 354 ALLEL 358 (360)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99975
No 49
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=96.75 E-value=0.53 Score=48.36 Aligned_cols=68 Identities=18% Similarity=0.193 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCCcEEEEEcCCcCcHHHHHHHHHHh---CCCCCCCC---CcchhHhhHHHHHhhhccC
Q 005807 357 LIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF---GKSPSKGV---NPDEAVALGAAIQGGILRG 429 (676)
Q Consensus 357 ~v~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~f---g~~~~~~~---~p~~aVa~GAal~a~~l~~ 429 (676)
+.+.+.+.+.++++..+ ++.|+|+||.+...++++.|.+.+ |.++..+. -.|.+++.|+|.+.....+
T Consensus 233 l~~~l~~~~~~a~~~~g-----~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~g 306 (334)
T 3eno_A 233 AFAMLVEVLERALYVSG-----KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKSG 306 (334)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcC-----CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHHcC
Confidence 44445555566666554 479999999999999999999887 54544332 4577899999876544333
No 50
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=96.72 E-value=0.0022 Score=71.51 Aligned_cols=88 Identities=18% Similarity=0.208 Sum_probs=63.7
Q ss_pred EEEEcHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcCCCcEEEEEcCCcCcHHHHHHHHHHhCCCCCCCCCcchhHhhHHH
Q 005807 342 NITLTRSKFETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIFGKSPSKGVNPDEAVALGAA 421 (676)
Q Consensus 342 ~~~itr~~fe~~~~~~v~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~fg~~~~~~~~p~~aVa~GAa 421 (676)
+..-+|.+|-.+++-+++.+.-.++..++...-....++.|.++||+++++.+.+++.+.||.++..+ ...++.|+|||
T Consensus 406 ~~~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~~~~~i~~~GG~aks~~~~Qi~ADv~g~pV~~~-~~~e~~alGAA 484 (554)
T 3l0q_A 406 KLSTTPEDMALRYLATIQALALGTRHIIETMNQNGYNIDTMMASGGGTKNPIFVQEHANATGCAMLLP-EESEAMLLGSA 484 (554)
T ss_dssp CSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEESGGGGCHHHHHHHHHHHCCEEEEE-SCSCHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccCHHHHHHHHHhhCCeEEec-CCCcchHHHHH
Confidence 34457888855455666666555555444322122457899999999999999999999999877554 45679999999
Q ss_pred HHhhhccCC
Q 005807 422 IQGGILRGD 430 (676)
Q Consensus 422 l~a~~l~~~ 430 (676)
+.|+.-.+.
T Consensus 485 ~lA~~a~G~ 493 (554)
T 3l0q_A 485 MMGTVAAGV 493 (554)
T ss_dssp HHHHHHTTS
T ss_pred HHHHHHcCC
Confidence 999976553
No 51
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=96.62 E-value=0.0022 Score=70.21 Aligned_cols=82 Identities=18% Similarity=0.192 Sum_probs=57.1
Q ss_pred cHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcCCCcEEEEEcCCcCcHHHHHHHHHHhCCCCCCCCCcchhHhhHHHHHhh
Q 005807 346 TRSKFETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIFGKSPSKGVNPDEAVALGAAIQGG 425 (676)
Q Consensus 346 tr~~fe~~~~~~v~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~fg~~~~~~~~p~~aVa~GAal~a~ 425 (676)
++.++ ++-+++.+.-.++..++........++.|.++||+++++.+.+++.+.||.++..+..++.+.|+|||+.|+
T Consensus 357 ~~~~~---~rAvlEgia~~~~~~~~~l~~~g~~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~~e~~~alGAA~lA~ 433 (484)
T 2itm_A 357 GPNEL---ARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARLAQ 433 (484)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHTTTCCCSCEEEESGGGCCHHHHHHHHHHHCCCEEEESCTTSCHHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEeccccCHHHHHHHHHHhCCeEEeCCCCCcccHHHHHHHHH
Confidence 45544 444444444444444433211123568899999999999999999999999887666555568999999998
Q ss_pred hccCC
Q 005807 426 ILRGD 430 (676)
Q Consensus 426 ~l~~~ 430 (676)
.-.+.
T Consensus 434 ~~~g~ 438 (484)
T 2itm_A 434 IAANP 438 (484)
T ss_dssp HHHCT
T ss_pred HHcCC
Confidence 75553
No 52
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=96.59 E-value=0.81 Score=46.88 Aligned_cols=62 Identities=16% Similarity=0.155 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHcCCCcCCCcEEEEEcCCcCcHHHHHHHHHHh---CCCCCCCC---CcchhHhhHHHHHhh
Q 005807 359 ERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF---GKSPSKGV---NPDEAVALGAAIQGG 425 (676)
Q Consensus 359 ~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~f---g~~~~~~~---~p~~aVa~GAal~a~ 425 (676)
+.+.+.+.++.+..+ ++.|+|+||.+....+++.|.+.+ |.++..+. -.|.+++.|+|.+..
T Consensus 230 ~~l~~~~~~~~~~~~-----~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~ 297 (330)
T 2ivn_A 230 AALVEVTERAVAHTE-----KDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRM 297 (330)
T ss_dssp HHHHHHHHHHHHHHC-----CSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-----CCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHHHHHHHH
Confidence 334444444444433 579999999999999999999877 55544443 346688888887544
No 53
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=96.57 E-value=0.0032 Score=69.14 Aligned_cols=77 Identities=18% Similarity=0.255 Sum_probs=58.1
Q ss_pred HHHhHHHHHHHHHHHHHHHHcCCCcCCCcEEEEEcCCcCcHHHHHHHHHHhCCCCCCCCCcchhHhhHHHHHhhhccCC
Q 005807 352 TLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIFGKSPSKGVNPDEAVALGAAIQGGILRGD 430 (676)
Q Consensus 352 ~~~~~~v~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~fg~~~~~~~~p~~aVa~GAal~a~~l~~~ 430 (676)
++++-+++.+.-.++..++...... .++.|.++||+++++.+.+++.+.||.++..+ .+.++.|+|||+.|+.-.+.
T Consensus 368 ~l~rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~-~~~e~~alGaA~lA~~~~g~ 444 (497)
T 2zf5_O 368 HLARATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGATANDFLMQFQADILNRKVIRP-VVKETTALGAAYLAGLAVDY 444 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCccccCHHHHHHHHhhcCCeEEEc-CCCcchHHHHHHHHHHHhCc
Confidence 3455566666666666666544333 67899999999999999999999999877654 44569999999999876553
No 54
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=96.50 E-value=0.0071 Score=61.94 Aligned_cols=75 Identities=19% Similarity=0.173 Sum_probs=50.6
Q ss_pred HHHHHHHHHHcCCCeEEeeChhHHHHHhccccC---CCCeEEEEeeCCceeEEEEEEEeCCeEEEEEecCCCCcchHHHH
Q 005807 202 RQATKDAGRIAGLDVQRIINEPTAAALSYGMNN---KEGLIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFD 278 (676)
Q Consensus 202 r~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~---~~~~vlV~D~GgGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D 278 (676)
...+..+-+..|+++-.|-.|.+|...+.+... .....+|+|+|||+|.+++.+ ++.+.. ..+.++|+..+.
T Consensus 100 ~~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~--~~~~~~---~~Sl~~G~v~l~ 174 (315)
T 1t6c_A 100 EEFLERVKREVGLVVEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGK--GYKVRE---VISLPIGIVNLT 174 (315)
T ss_dssp HHHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEEEE--TTEEEE---EEEECCCHHHHH
T ss_pred HHHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEEEe--CCceee---EEEEeccHHHHH
Confidence 445555556789998766677777655443321 134799999999999999964 443321 234689998887
Q ss_pred HHH
Q 005807 279 NAL 281 (676)
Q Consensus 279 ~~l 281 (676)
+.+
T Consensus 175 e~~ 177 (315)
T 1t6c_A 175 ETF 177 (315)
T ss_dssp HHH
T ss_pred HHh
Confidence 764
No 55
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=96.48 E-value=0.0044 Score=68.73 Aligned_cols=77 Identities=13% Similarity=0.174 Sum_probs=60.5
Q ss_pred HHHHhHHHHHHHHHHHHHHHHcCCCcCCCcEEEEEcCCcCcHHHHHHHHHHhCCCCCCCCCcchhHhhHHHHHhhhcc
Q 005807 351 ETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIFGKSPSKGVNPDEAVALGAAIQGGILR 428 (676)
Q Consensus 351 e~~~~~~v~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~fg~~~~~~~~p~~aVa~GAal~a~~l~ 428 (676)
..+++-+++.+.-.++..++..+.....++.|.++||+++++.+.+++.+.||.++..+ .+.++.|+|||+.|+.-.
T Consensus 407 ~~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA~~a~ 483 (538)
T 4bc3_A 407 DVEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVFDAPVYVI-DTANSACVGSAYRAFHGL 483 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHHTSCEEEC-CCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHhCCceEec-CCCCchHHHHHHHHHHHh
Confidence 45566666766666667777665444567899999999999999999999999976543 457899999999998644
No 56
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=96.41 E-value=0.56 Score=47.40 Aligned_cols=42 Identities=21% Similarity=0.156 Sum_probs=27.8
Q ss_pred HcCCCeEEeeChhHHHHHhcccc---CCCCeEEEEeeCCceeEEEEE
Q 005807 211 IAGLDVQRIINEPTAAALSYGMN---NKEGLIAVFDLGGGTFDVSVL 254 (676)
Q Consensus 211 ~AGl~~~~li~Ep~AAal~y~~~---~~~~~vlV~D~GgGT~Dvsv~ 254 (676)
..|++ +.+.|+..|||++-... +..++++++-+|-| +-..++
T Consensus 97 ~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii 141 (302)
T 3vov_A 97 ATGRP-VFLENDANAAALAEHHLGAAQGEESSLYLTVSTG-IGGGVV 141 (302)
T ss_dssp HHSSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred hhCCC-EEEEechHHHHHHHHHhCCCCCCCCEEEEEECCc-eeEEEE
Confidence 34776 57999999999864322 23347888888877 444443
No 57
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=96.35 E-value=0.18 Score=51.53 Aligned_cols=41 Identities=22% Similarity=0.276 Sum_probs=28.9
Q ss_pred cCCCeEEeeChhHHHHHhccc---cCCCCeEEEEeeCCceeEEEEE
Q 005807 212 AGLDVQRIINEPTAAALSYGM---NNKEGLIAVFDLGGGTFDVSVL 254 (676)
Q Consensus 212 AGl~~~~li~Ep~AAal~y~~---~~~~~~vlV~D~GgGT~Dvsv~ 254 (676)
.|++ +.+.|+..|+|++-.. .+..++++++-+|.| +-..++
T Consensus 96 ~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii 139 (321)
T 3vgl_A 96 VGLP-VVVENDANAAAWGEYRFGAGQGHDDVICITLGTG-LGGGII 139 (321)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcc-eEEEEE
Confidence 4776 6899999999987432 233347888888888 555554
No 58
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=96.33 E-value=0.0035 Score=68.88 Aligned_cols=53 Identities=26% Similarity=0.354 Sum_probs=45.4
Q ss_pred CCcEEEEEcCCcCcHHHHHHHHHHhCCCCCCCCCcchhHhhHHHHHhhhccCCC
Q 005807 378 DVDEVLLVGGMTRVPKVQEIVTEIFGKSPSKGVNPDEAVALGAAIQGGILRGDV 431 (676)
Q Consensus 378 ~i~~ViLvGG~s~~p~i~~~l~~~fg~~~~~~~~p~~aVa~GAal~a~~l~~~~ 431 (676)
.++.|.++||+++++.+.+++.+.||.++.. ..+.++.|+|||+.|+.-.+..
T Consensus 404 ~~~~i~~~GG~aks~~~~Qi~Adv~g~pV~~-~~~~e~~alGaA~la~~a~G~~ 456 (501)
T 3g25_A 404 DVQSLRVDGGAVKNNFIMQFQADIVNTSVER-PEIQETTALGAAFLAGLAVGFW 456 (501)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHHTSEEEE-ESCCCHHHHHHHHHHHHHTTSS
T ss_pred CCcEEEEecchhcCHHHHHHHHHHhCCceEe-cCCCcchHHHHHHHHHHHhCcc
Confidence 4689999999999999999999999987654 4467899999999999766643
No 59
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=96.16 E-value=1.1 Score=45.81 Aligned_cols=47 Identities=23% Similarity=0.156 Sum_probs=32.8
Q ss_pred CcEEEEEcCCcCcHHHHHHHHHHhCCCC---------CCCCCcchhHhhHHHHHhh
Q 005807 379 VDEVLLVGGMTRVPKVQEIVTEIFGKSP---------SKGVNPDEAVALGAAIQGG 425 (676)
Q Consensus 379 i~~ViLvGG~s~~p~i~~~l~~~fg~~~---------~~~~~p~~aVa~GAal~a~ 425 (676)
++.|+|.||.+..+.+.+.|++.+.... ....-.+.+.++|||.++.
T Consensus 270 p~~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~l 325 (327)
T 4db3_A 270 PHVVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLNI 325 (327)
T ss_dssp CSEEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTTC
T ss_pred CCEEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHHh
Confidence 4789999999988878787877763211 1122346789999997653
No 60
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=96.15 E-value=0.0039 Score=68.65 Aligned_cols=53 Identities=23% Similarity=0.304 Sum_probs=45.1
Q ss_pred CCcEEEEEcCCcCcHHHHHHHHHHhCCCCCCCCCcchhHhhHHHHHhhhccCCC
Q 005807 378 DVDEVLLVGGMTRVPKVQEIVTEIFGKSPSKGVNPDEAVALGAAIQGGILRGDV 431 (676)
Q Consensus 378 ~i~~ViLvGG~s~~p~i~~~l~~~fg~~~~~~~~p~~aVa~GAal~a~~l~~~~ 431 (676)
.++.|.++||+++++.+.+++.+.||.++.. ..+.++.|+|||+.|+.-.+..
T Consensus 401 ~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~-~~~~e~~alGaA~lA~~a~G~~ 453 (510)
T 2p3r_A 401 RLHALRVDGGAVANNFLMQFQSDILGTRVER-PEVREVTALGAAYLAGLAVGFW 453 (510)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHHTSEEEE-ESCCCHHHHHHHHHHHHHHTSS
T ss_pred CccEEEEeCchhcCHHHHHHHHHHhCCceEe-cCCCCcHHHHHHHHHHHHhCcc
Confidence 4689999999999999999999999987654 4467799999999998766543
No 61
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=96.12 E-value=0.0047 Score=69.00 Aligned_cols=80 Identities=18% Similarity=0.254 Sum_probs=56.5
Q ss_pred cHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcCCCcEEEEEcCCc-CcHHHHHHHHHHhCCCCCCCCCcchhHhhHHHHHh
Q 005807 346 TRSKFETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMT-RVPKVQEIVTEIFGKSPSKGVNPDEAVALGAAIQG 424 (676)
Q Consensus 346 tr~~fe~~~~~~v~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~~p~i~~~l~~~fg~~~~~~~~p~~aVa~GAal~a 424 (676)
++.+| ++-+++.+.-.++.+++...-....++.|.++||++ +++.+.+++.+.||.++.. ..+.++.|+|||+.|
T Consensus 410 t~~~l---~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~ks~~~~Qi~ADv~g~pV~~-~~~~e~~alGaA~lA 485 (572)
T 3jvp_A 410 KPEEI---YRALLEATAFGTRAIVDAFHGRGVEVHELYACGGLPQKNHLLMQIFADVTNREIKV-AASKQTPALGAAMFA 485 (572)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEESSHHHHCHHHHHHHHHHHTSCEEE-BCCSSHHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCcCEEEEEcCchhhCHHHHHHHHHHHCCeeEe-cCCCccHHHHHHHHH
Confidence 56554 444555444444443332211224578999999999 9999999999999997654 446789999999999
Q ss_pred hhccC
Q 005807 425 GILRG 429 (676)
Q Consensus 425 ~~l~~ 429 (676)
+.-.+
T Consensus 486 ~~a~G 490 (572)
T 3jvp_A 486 SVAAG 490 (572)
T ss_dssp HHHHC
T ss_pred HHhcC
Confidence 87554
No 62
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=95.98 E-value=1.1 Score=45.51 Aligned_cols=47 Identities=21% Similarity=0.143 Sum_probs=32.2
Q ss_pred CcEEEEEcCCcCc-HHHHHHHHHHhC----------CCCCCCCCcchhHhhHHHHHhh
Q 005807 379 VDEVLLVGGMTRV-PKVQEIVTEIFG----------KSPSKGVNPDEAVALGAAIQGG 425 (676)
Q Consensus 379 i~~ViLvGG~s~~-p~i~~~l~~~fg----------~~~~~~~~p~~aVa~GAal~a~ 425 (676)
.+.|+|.||.++. +.+.+.|++.+. .++......+.+.++|||.++.
T Consensus 261 P~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~~ 318 (321)
T 3r8e_A 261 LNNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLIM 318 (321)
T ss_dssp CCEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHHH
T ss_pred CCEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHHH
Confidence 4789999999876 666666655542 1223344566799999998764
No 63
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=95.88 E-value=0.012 Score=64.51 Aligned_cols=80 Identities=19% Similarity=0.266 Sum_probs=55.3
Q ss_pred cHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCcCCCcEEEEEcCCcCcHHHHHHHHHHhCCCCCCCCCcchhHhhHHHHHh
Q 005807 346 TRSKFETLVNHLIERTKAPCKNCLKDAN-ITIKDVDEVLLVGGMTRVPKVQEIVTEIFGKSPSKGVNPDEAVALGAAIQG 424 (676)
Q Consensus 346 tr~~fe~~~~~~v~~i~~~i~~~l~~~~-~~~~~i~~ViLvGG~s~~p~i~~~l~~~fg~~~~~~~~p~~aVa~GAal~a 424 (676)
++.++ ++-+++.+.-.++..++... .....++.|.++||.++++.+.+++.+.||.++..+ .+.++.|.|||+.|
T Consensus 368 ~~~~~---~rAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG~a~n~~~~q~~Adv~g~pV~~~-~~~e~~alGaA~la 443 (495)
T 2dpn_A 368 SRAHL---ARAALEGVAFQVRDVVLAMEEEAGVRLKVLKADGGMAQNRLFLKIQADLLGVPVAVP-EVTETTALGAALMA 443 (495)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHTTTSCCCCCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecccccCHHHHHHHHHHhCCeeEec-CCcccHHHHHHHHH
Confidence 45544 44444444444444444321 112346889999999999999999999999877543 45669999999999
Q ss_pred hhccC
Q 005807 425 GILRG 429 (676)
Q Consensus 425 ~~l~~ 429 (676)
+.-.+
T Consensus 444 ~~a~G 448 (495)
T 2dpn_A 444 GVGAG 448 (495)
T ss_dssp HHHHT
T ss_pred HhhcC
Confidence 86544
No 64
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=95.80 E-value=0.93 Score=45.62 Aligned_cols=48 Identities=17% Similarity=0.171 Sum_probs=35.2
Q ss_pred CcEEEEEcCCcCcHHHHHHHHHHhCCCC------CCCCCcchhHhhHHHHHhhh
Q 005807 379 VDEVLLVGGMTRVPKVQEIVTEIFGKSP------SKGVNPDEAVALGAAIQGGI 426 (676)
Q Consensus 379 i~~ViLvGG~s~~p~i~~~l~~~fg~~~------~~~~~p~~aVa~GAal~a~~ 426 (676)
++.|+|.||.+..+.+.+.|++.+.... ......+.+.++|||.++..
T Consensus 238 p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~ 291 (297)
T 4htl_A 238 PTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQ 291 (297)
T ss_dssp CSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHH
Confidence 4789999999988888888888775321 12334567899999987654
No 65
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=95.75 E-value=0.45 Score=48.53 Aligned_cols=48 Identities=23% Similarity=0.176 Sum_probs=32.7
Q ss_pred CcEEEEEcCCcC-cHHHHHHHHHHhCCC----------CCCCCCcchhHhhHHHHHhhh
Q 005807 379 VDEVLLVGGMTR-VPKVQEIVTEIFGKS----------PSKGVNPDEAVALGAAIQGGI 426 (676)
Q Consensus 379 i~~ViLvGG~s~-~p~i~~~l~~~fg~~----------~~~~~~p~~aVa~GAal~a~~ 426 (676)
++.|+|.||.+. .+.+.+.+++.+... +......+.+.+.|||.++..
T Consensus 263 p~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~~ 321 (326)
T 2qm1_A 263 PDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLALQ 321 (326)
T ss_dssp CSEEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHGGG
T ss_pred CCEEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHHHHH
Confidence 468999999886 577777777666311 112234567899999988764
No 66
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=95.73 E-value=0.0089 Score=65.67 Aligned_cols=51 Identities=29% Similarity=0.419 Sum_probs=43.9
Q ss_pred CCcEEEEEcCCcCcHHHHHHHHHHhCCCCCCCCCcchhHhhHHHHHhhhccC
Q 005807 378 DVDEVLLVGGMTRVPKVQEIVTEIFGKSPSKGVNPDEAVALGAAIQGGILRG 429 (676)
Q Consensus 378 ~i~~ViLvGG~s~~p~i~~~l~~~fg~~~~~~~~p~~aVa~GAal~a~~l~~ 429 (676)
.++.|.++||+++++.+.+++.+.||.++.. ..+.++.|+|||+.|+.-.+
T Consensus 403 ~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~-~~~~e~~alGaA~lA~~~~G 453 (504)
T 2d4w_A 403 DLTELRVDGGMVANELLMQFQADQLGVDVVR-PKVAETTALGAAYAAGIAVG 453 (504)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHHTSCEEE-ESCSCHHHHHHHHHHHHHHT
T ss_pred CcceEEEeCCcccCHHHHHHHHHHhCCeEEe-CCCCcchHHHHHHHHHhhcC
Confidence 4589999999999999999999999987754 45567999999999987555
No 67
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=95.70 E-value=0.0088 Score=65.71 Aligned_cols=52 Identities=21% Similarity=0.269 Sum_probs=43.8
Q ss_pred CC-cEEEEEcCCcCcHHHHHHHHHHhCCCCCCCCCcchhHhhHHHHHhhhccCC
Q 005807 378 DV-DEVLLVGGMTRVPKVQEIVTEIFGKSPSKGVNPDEAVALGAAIQGGILRGD 430 (676)
Q Consensus 378 ~i-~~ViLvGG~s~~p~i~~~l~~~fg~~~~~~~~p~~aVa~GAal~a~~l~~~ 430 (676)
.+ +.|.++||.++++.+.+++.+.||.++.. ..+.++.|.|||+.|+.-.+.
T Consensus 406 ~~~~~i~~~GG~a~s~~~~Q~~Adv~g~pV~~-~~~~e~~alGaA~la~~~~G~ 458 (503)
T 2w40_A 406 EMLHVLRCDGGMTKNKPFMQFNSDIINTKIEV-SKYKEVTSLGAAVLAGLEVKI 458 (503)
T ss_dssp SCCSCEEEESGGGGCHHHHHHHHHHHTSCEEE-ESCSCHHHHHHHHHHHHHTTC
T ss_pred CccceEEEeCccccCHHHHHHHHHHHCCeEEe-cCCCcchHHHHHHHHHHHhCc
Confidence 35 78999999999999999999999987754 445669999999999875553
No 68
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=95.49 E-value=2.6 Score=43.12 Aligned_cols=61 Identities=8% Similarity=-0.026 Sum_probs=41.2
Q ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHHc-C--CCeEEeeChhHHHHHhccccCCCCeEEEEeeCCcee
Q 005807 185 SVSEAVITVPAYFNDAQRQATKDAGRIA-G--LDVQRIINEPTAAALSYGMNNKEGLIAVFDLGGGTF 249 (676)
Q Consensus 185 ~~~~~VITVPa~~~~~qr~~l~~Aa~~A-G--l~~~~li~Ep~AAal~y~~~~~~~~vlV~D~GgGT~ 249 (676)
++..+.|++|...+......+++..+.. | .-.+.+.|+..|||+++ . ....+++=+|-|.-
T Consensus 70 ~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~-~---~~~~v~v~~GTGig 133 (347)
T 2ch5_A 70 PLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATA-T---PDGGVVLISGTGSN 133 (347)
T ss_dssp CBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHH-C---SSCEEEEEESSSEE
T ss_pred ceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhh-C---CCCcEEEEEcCCce
Confidence 5778999999998876655666665543 4 13468999999999984 2 23445555566543
No 69
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=95.18 E-value=0.016 Score=63.34 Aligned_cols=47 Identities=21% Similarity=0.259 Sum_probs=39.4
Q ss_pred CCcEEEEEcCCcCcHHHHHHHHHHhCCCCCCCCCcchhHhhHHHHHhhh
Q 005807 378 DVDEVLLVGGMTRVPKVQEIVTEIFGKSPSKGVNPDEAVALGAAIQGGI 426 (676)
Q Consensus 378 ~i~~ViLvGG~s~~p~i~~~l~~~fg~~~~~~~~p~~aVa~GAal~a~~ 426 (676)
.++.|.++||+++++.+.+++.+.||.++.... .++.+.|||+.|..
T Consensus 393 ~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~--~e~~alGaa~~A~~ 439 (489)
T 2uyt_A 393 DFSQLHIVGGGCQNTLLNQLCADACGIRVIAGP--VEASTLGNIGIQLM 439 (489)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHHTSEEEECC--TTHHHHHHHHHHHH
T ss_pred CCCEEEEeCChhhhHHHHHHHHHHHCCeeecCC--ccHhHHHHHHHHHH
Confidence 468999999999999999999999999876443 58999999655543
No 70
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=95.04 E-value=1.7 Score=44.14 Aligned_cols=75 Identities=15% Similarity=0.247 Sum_probs=47.6
Q ss_pred HHHHHHHHHHcCCCeEEeeChhHHHHHhcccc----CCCCeEEEEeeCCceeEEEEEEEeCCeEEEEEecCCCCcchHHH
Q 005807 202 RQATKDAGRIAGLDVQRIINEPTAAALSYGMN----NKEGLIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDF 277 (676)
Q Consensus 202 r~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~----~~~~~vlV~D~GgGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~ 277 (676)
...+.++-+..|+++-.|-.|-+|.-.+.+.. ...+..+|+|+|||+|.+++.+ ++.+.. ..+.++|.-.+
T Consensus 92 ~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~--~~~~~~---~~Sl~lG~vrl 166 (315)
T 3mdq_A 92 QVLIDRIKKEVNIDVEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGN--KNEILW---KQSFEIGGQRL 166 (315)
T ss_dssp HHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEEC--SSCEEE---EEEESCCHHHH
T ss_pred HHHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEE--CCeEee---eEEEechhhHH
Confidence 44556666678999755555666654433322 2224799999999999999975 333221 22367888777
Q ss_pred HHHH
Q 005807 278 DNAL 281 (676)
Q Consensus 278 D~~l 281 (676)
.+.+
T Consensus 167 ~e~f 170 (315)
T 3mdq_A 167 IDRF 170 (315)
T ss_dssp HHHS
T ss_pred HHHh
Confidence 6643
No 71
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=94.01 E-value=3 Score=43.89 Aligned_cols=41 Identities=10% Similarity=0.101 Sum_probs=28.0
Q ss_pred cCCCeEEeeChhHHHHHhcc---ccCCCCeEEEEeeCCceeEEEEE
Q 005807 212 AGLDVQRIINEPTAAALSYG---MNNKEGLIAVFDLGGGTFDVSVL 254 (676)
Q Consensus 212 AGl~~~~li~Ep~AAal~y~---~~~~~~~vlV~D~GgGT~Dvsv~ 254 (676)
.|++ +.+.|+..|||++-. ..+..++++++-+|.| +-..++
T Consensus 186 ~~~p-v~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~giv 229 (406)
T 1z6r_A 186 TGVP-VYIQHDISAWTMAEALFGASRGARDVIQVVIDHN-VGAGVI 229 (406)
T ss_dssp HSSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhcCCCCCCcEEEEEECCc-EEEEEE
Confidence 4776 689999999998743 2223347888888887 445554
No 72
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=93.94 E-value=4.5 Score=41.01 Aligned_cols=41 Identities=24% Similarity=0.217 Sum_probs=27.5
Q ss_pred cCCCeEEeeChhHHHHHhcc---ccCCCCeEEEEeeCCceeEEEEE
Q 005807 212 AGLDVQRIINEPTAAALSYG---MNNKEGLIAVFDLGGGTFDVSVL 254 (676)
Q Consensus 212 AGl~~~~li~Ep~AAal~y~---~~~~~~~vlV~D~GgGT~Dvsv~ 254 (676)
.|++ +.+.|+..|||++-. ..+..++++++-+|-| +-..++
T Consensus 120 ~~~p-v~v~NDa~aaalgE~~~g~~~~~~~~v~l~~GtG-iG~giv 163 (327)
T 2ap1_A 120 LDRD-VRLDNDANCFALSEAWDDEFTQYPLVMGLILGTG-VGGGLV 163 (327)
T ss_dssp HTSC-EEEEEHHHHHHHHHHTSTTGGGCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEecHHHHHHHHHHHhCcCCCCCcEEEEEECCc-EEEEEE
Confidence 4776 689999999998632 2222347888888887 444443
No 73
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=93.90 E-value=0.064 Score=58.30 Aligned_cols=72 Identities=8% Similarity=0.003 Sum_probs=54.7
Q ss_pred HHHHhHHHHH--HHHHHHHHHHHcCCCcCCCcEEEEEcCCcCcHHHHHHHHHH-hCCCCCCCCCcchhHhhHHHHHhhhc
Q 005807 351 ETLVNHLIER--TKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEI-FGKSPSKGVNPDEAVALGAAIQGGIL 427 (676)
Q Consensus 351 e~~~~~~v~~--i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~-fg~~~~~~~~p~~aVa~GAal~a~~l 427 (676)
..+.+-+++. +.-.++.+++.... .+.|.++||++++|.+.+++.+. ||.++..+. ..++.|+|||+.|+.-
T Consensus 362 ~~l~RA~lE~~Gia~~~r~~l~~~~~----~~~i~~~GG~a~s~~w~Qi~ADv~~g~pV~~~~-~~e~~alGAA~lA~~a 436 (482)
T 3h6e_A 362 DWFERRAAACLYAALVADTALDLIGS----TGRILVEGRFAEADVFVRALASLRPDCAVYTAN-AHNDVSFGALRLIDPG 436 (482)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTTC----CSEEEEESGGGGCHHHHHHHHHHSTTSEEEEES-SCCCTTGGGHHHHCTT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhcC----CCeEEEeCCcccCHHHHHHHhhhcCCCeEEEcC-CCchHHHHHHHHhCcc
Confidence 4556666663 55556666665432 27899999999999999999999 999776554 4568899999999864
No 74
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=93.86 E-value=0.57 Score=51.91 Aligned_cols=57 Identities=18% Similarity=0.423 Sum_probs=45.8
Q ss_pred EEEEcHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcCCCcEEEEEcCCcCcHHHHHHHH
Q 005807 342 NITLTRSKFETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVT 399 (676)
Q Consensus 342 ~~~itr~~fe~~~~~~v~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~ 399 (676)
.+.||..+++++.. --..+..-++-.|++++++..+|+.|+|.||++.---+.+.+.
T Consensus 499 ~i~itq~DIr~~ql-AKaAi~agi~~Ll~~~gi~~~di~~v~lAGaFG~~l~~~~a~~ 555 (631)
T 3zyy_X 499 DIVITEADIQNLIR-AKAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFGKYLNIKDAIT 555 (631)
T ss_dssp CEEEEHHHHHHHHH-HHHHHHHHHHHHHHHTTCCGGGCCEEEEESSSCSEEEHHHHHH
T ss_pred cEEEeHHHHHHHHH-HHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccCCHHHHhh
Confidence 48899999987643 3334556778889999999999999999999998777777664
No 75
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=93.34 E-value=7.1 Score=38.89 Aligned_cols=48 Identities=23% Similarity=0.254 Sum_probs=35.5
Q ss_pred CCcEEEEEcCCcCcHHHHHHHHHHhCC-CCCCCCCcchhHhhHHHHHhhh
Q 005807 378 DVDEVLLVGGMTRVPKVQEIVTEIFGK-SPSKGVNPDEAVALGAAIQGGI 426 (676)
Q Consensus 378 ~i~~ViLvGG~s~~p~i~~~l~~~fg~-~~~~~~~p~~aVa~GAal~a~~ 426 (676)
+.+.|+|.||.+..+.+.+.+++.+.. ++..+. .+.+.+.||+.++..
T Consensus 239 ~p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~-~~~~~~~GAa~la~~ 287 (299)
T 2e2o_A 239 GTNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDL-GKRSPEIGAVILAYK 287 (299)
T ss_dssp TCSEEEEESGGGGSHHHHHHHHHHHHHTTCEEEC-CSCCHHHHHHHHHHH
T ss_pred CCCEEEEECCccCcHHHHHHHHHHCCCCeEeccC-CCCChHHHHHHHHHH
Confidence 347899999998778888888887753 333344 567889999987754
No 76
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=92.39 E-value=6.1 Score=41.82 Aligned_cols=41 Identities=17% Similarity=0.235 Sum_probs=27.9
Q ss_pred cCCCeEEeeChhHHHHHhcc---ccCCCCeEEEEeeCCceeEEEEE
Q 005807 212 AGLDVQRIINEPTAAALSYG---MNNKEGLIAVFDLGGGTFDVSVL 254 (676)
Q Consensus 212 AGl~~~~li~Ep~AAal~y~---~~~~~~~vlV~D~GgGT~Dvsv~ 254 (676)
.|++ +.+.|+..|||++-. ..+..++++++-+|.| +-..++
T Consensus 208 ~~~p-V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~giv 251 (429)
T 1z05_A 208 TGLP-VFVANDTRAWALAEKLFGHSQDVDNSVLISIHHG-LGAGIV 251 (429)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCc-EEEEEE
Confidence 4776 589999999998743 2223347888888887 445544
No 77
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=90.71 E-value=2.3 Score=41.54 Aligned_cols=20 Identities=30% Similarity=0.393 Sum_probs=17.7
Q ss_pred ceEEEEcCCceEEEEEEECC
Q 005807 54 DVIGVDLGTTNSCVAVMEGK 73 (676)
Q Consensus 54 ~vvGID~GTt~s~va~~~~~ 73 (676)
+.++||+|+|+++.++++++
T Consensus 4 M~L~IDIGNT~ik~gl~~~~ 23 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSITEDG 23 (249)
T ss_dssp EEEEEEECSSEEEEEEESSS
T ss_pred eEEEEEECCCeEEEEEEECC
Confidence 48999999999999998754
No 78
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=89.91 E-value=1.3 Score=47.46 Aligned_cols=56 Identities=13% Similarity=-0.003 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHcCCC--eEEeeChhHHHHHhccccCCCCeEEEEeeCCceeEEEEEEE
Q 005807 200 AQRQATKDAGRIAGLD--VQRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSVLEI 256 (676)
Q Consensus 200 ~qr~~l~~Aa~~AGl~--~~~li~Ep~AAal~y~~~~~~~~vlV~D~GgGT~Dvsv~~~ 256 (676)
.-++.+.++...-|++ ++.++|+..|++++... +..+.++.+=+|-|+=-.-+...
T Consensus 164 ~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~-~~~~~~iglilGTGvgg~~i~~~ 221 (457)
T 2yhx_A 164 KLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNY-TDAXIKMGIIFGSGVNAAYWCDS 221 (457)
T ss_dssp SBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHH-HCTTEEEEEEESSSEEEEEEECG
T ss_pred HHHHHHHHhHhhcCCcceeEEEEecchhhccchhh-cCCccEEEEEECcEEEEEEEECC
Confidence 5567788888766775 47899999999998665 22346666667877655555443
No 79
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=89.88 E-value=10 Score=41.43 Aligned_cols=183 Identities=15% Similarity=0.167 Sum_probs=91.4
Q ss_pred CCCeEEEEe-CCCCCHHHHHH--HHHHHHHcCCCeEEeeChhHHHHHhccccCC-CCeEEEEeeCCceeEEEEEEEeCCe
Q 005807 185 SVSEAVITV-PAYFNDAQRQA--TKDAGRIAGLDVQRIINEPTAAALSYGMNNK-EGLIAVFDLGGGTFDVSVLEISNGV 260 (676)
Q Consensus 185 ~~~~~VITV-Pa~~~~~qr~~--l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~-~~~vlV~D~GgGT~Dvsv~~~~~~~ 260 (676)
+++.+++|. |..|+.-..-. -+.-|...|.+.+. ++.-.|-+++...... ... +++-+.||++.+.. +.++.
T Consensus 72 ~id~ia~~~gPG~~~~l~vg~~~ak~la~~~~~p~~~-v~h~~aH~~~~~~~~~~~~p-~~l~vsGg~t~~~~--~~~~~ 147 (540)
T 3en9_A 72 EIDLIAFSQGPGLGPSLRVTATVARTLSLTLKKPIIG-VNHCIAHIEIGKLTTEAEDP-LTLYVSGGNTQVIA--YVSKK 147 (540)
T ss_dssp GCCEEEEEEESSCHHHHHHHHHHHHHHHHHHTCCEEE-EEHHHHHHHHHHHHSSCSSC-EEEEECSSCEEEEE--EETTE
T ss_pred HCcEEEEecCCCchhhHHHHHHHHHHHHHHhCCCeeE-eccHHHHHHHHHHhcCCCCC-cEEEEcCCCcEEEE--EeCCc
Confidence 466676766 77766432211 12234445776544 4554544433222221 123 66666678876654 44788
Q ss_pred EEEEEecCCCCcchHHHHHHHHHHHHHHhhhhccCCCccCHHHHHHHHHHHHHHHHHcCCCCceeeeccccccCCCCCee
Q 005807 261 FEVKATNGDTFLGGEDFDNALLEFLVSEFKRTERIDLSQDKLALQRLRESAEKAKIELSSTSQTEINLPFITADASGAKH 340 (676)
Q Consensus 261 ~~v~~~~g~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~~~~~~~g~~~ 340 (676)
+++++..-|. --|+.||..= . .+ +......+ .+...|...+ ..+.+|....+ .+
T Consensus 148 ~~~lg~t~d~-s~G~~~D~~a-~----~l----gl~~~gg~----~ie~lA~~g~--------~~~~~p~~~~~----~~ 201 (540)
T 3en9_A 148 YRVFGETLDI-AVGNCLDQFA-R----YV----NLPHPGGP----YIEELARKGK--------KLVDLPYTVKG----MD 201 (540)
T ss_dssp EEEEEEBSSS-CHHHHHHHHH-H----HT----TCCSSCHH----HHHHHHHTCC--------CCCCCCCCEET----TE
T ss_pred eEEEeeccch-HhHHHHHHHH-H----Hc----CCCCCCHH----HHHHHHHcCC--------ccCcCCCCCCC----cc
Confidence 9998876643 4467676421 1 11 22222212 2222222211 11222221111 11
Q ss_pred eEEE-------------EcHHHHHHHHh-HHHHHHHHHHHHHHHHcCCCcCCCcEEEEEcCCcCcHHHHHHHHHHh
Q 005807 341 LNIT-------------LTRSKFETLVN-HLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF 402 (676)
Q Consensus 341 ~~~~-------------itr~~fe~~~~-~~v~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~f 402 (676)
+++. .+.+++-..++ .+++.+.+.+..+++..+ ++.|+|+||-+....+++.|.+.+
T Consensus 202 ~sfsgl~~~~~~~~~~~~~~~~ia~~fq~~~~~~l~~~~~~a~~~~~-----~~~~~~~GGVa~N~~l~~~l~~~~ 272 (540)
T 3en9_A 202 IAFSGLLTAAMRAYDAGERLEDICYSLQEYAFSMLTEITERALAHTN-----KGEVMLVGGVAANNRLREMLKAMC 272 (540)
T ss_dssp ECCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHHHH
T ss_pred eecHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCeEEEeCcHHhHHHHHHHHHHHH
Confidence 1100 01222222222 234444455566666655 479999999999999999999877
No 80
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=88.28 E-value=0.82 Score=47.09 Aligned_cols=77 Identities=19% Similarity=0.189 Sum_probs=46.5
Q ss_pred HHHHHHHHHHcCCCeEEeeChhHHHHHhccc----cC--CCCeEEEEeeCCceeEEEEEEE--eC--CeEEEEEecCCCC
Q 005807 202 RQATKDAGRIAGLDVQRIINEPTAAALSYGM----NN--KEGLIAVFDLGGGTFDVSVLEI--SN--GVFEVKATNGDTF 271 (676)
Q Consensus 202 r~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~----~~--~~~~vlV~D~GgGT~Dvsv~~~--~~--~~~~v~~~~g~~~ 271 (676)
.+.+.++-+..|+++-.|-.|-+|...+.+. .. ..+.++|+|+|||+|+++++.- .+ +.+ . .....+
T Consensus 105 ~~fl~~v~~~tGi~ieVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~--~-~~~Slp 181 (343)
T 3cer_A 105 EEFEDEIERILGVRPEVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQV--Q-GAFSMN 181 (343)
T ss_dssp HHHHHHHHHHHSSCCEECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSC--S-EEEEES
T ss_pred HHHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeecCccCccccc--c-eeEEEe
Confidence 3455666666799874444444444333332 22 2237999999999999999754 21 111 0 122367
Q ss_pred cchHHHHHHH
Q 005807 272 LGGEDFDNAL 281 (676)
Q Consensus 272 lGG~~~D~~l 281 (676)
+|+..+.+.+
T Consensus 182 lG~v~lt~~~ 191 (343)
T 3cer_A 182 IGSVRMTERH 191 (343)
T ss_dssp CCHHHHHHHT
T ss_pred hhHHHHHHHh
Confidence 9998887765
No 81
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=85.12 E-value=2.4 Score=45.51 Aligned_cols=57 Identities=9% Similarity=0.025 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHcCCCe--EEeeChhHHHHHhccccCCCCeEEEEeeCCceeEEEEEEE
Q 005807 199 DAQRQATKDAGRIAGLDV--QRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSVLEI 256 (676)
Q Consensus 199 ~~qr~~l~~Aa~~AGl~~--~~li~Ep~AAal~y~~~~~~~~vlV~D~GgGT~Dvsv~~~ 256 (676)
..-.+.+++|...-|+++ +.++|+..|++++..... .+.++-+=+|-||=-+-+..+
T Consensus 185 ~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~-~~~~iglIlGTG~N~~y~e~~ 243 (485)
T 3o8m_A 185 HDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTD-PQTKMGIIIGTGVNGAYYDVV 243 (485)
T ss_dssp SBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHC-TTEEEEEEESSSEEEEEEEEG
T ss_pred ccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCC-CCcEEEEEEecCcceEEEeec
Confidence 455778999998889864 689999999999876543 235555556777655555443
No 82
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=84.43 E-value=1.3 Score=48.22 Aligned_cols=74 Identities=20% Similarity=0.260 Sum_probs=45.5
Q ss_pred HHHHHHHHHcCCCeEEeeChhHHHHHhccccC--C-CCeEEEEeeCCceeEEEEEEEeCCeEEEEEecCCCCcchHHHHH
Q 005807 203 QATKDAGRIAGLDVQRIINEPTAAALSYGMNN--K-EGLIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDN 279 (676)
Q Consensus 203 ~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~--~-~~~vlV~D~GgGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~ 279 (676)
..+.++-+..|+++-.|-.|-+|...+.+... . .+..+|+|+|||+|.+++.+ ++.+.. ....++|...+.+
T Consensus 100 ~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~~~~~lviDIGGGStEl~~~~--~~~~~~---~~Sl~lG~vrlte 174 (513)
T 1u6z_A 100 DFLKRAEKVIPYPIEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGE--NFEPIL---VESRRMGCVSFAQ 174 (513)
T ss_dssp HHHHHHTTTCSSCEEECCHHHHHHHHHHHHHHHSCCCSCEEEEEECSSCEEEEEEE--TTEEEE---EEEESCCHHHHHH
T ss_pred HHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHhhccCCCCEEEEEECCCcEEEEEEe--CCeeeE---EEEEeccHHHHHH
Confidence 44555556679987444444444443333321 1 12689999999999999863 443321 2236789888876
Q ss_pred HH
Q 005807 280 AL 281 (676)
Q Consensus 280 ~l 281 (676)
.+
T Consensus 175 ~f 176 (513)
T 1u6z_A 175 LY 176 (513)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 83
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=84.02 E-value=2.1 Score=46.54 Aligned_cols=74 Identities=20% Similarity=0.268 Sum_probs=46.3
Q ss_pred HHHHHHHHHHcCCCeEEeeChhHHHHHhccccC--CCCeEEEEeeCCceeEEEEEEEeCCeEEEEEecCCCCcchHHHHH
Q 005807 202 RQATKDAGRIAGLDVQRIINEPTAAALSYGMNN--KEGLIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLGGEDFDN 279 (676)
Q Consensus 202 r~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~--~~~~vlV~D~GgGT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~ 279 (676)
...+.++-+..|+++-.|-.|-+|.-.+.+... .....+|+|+|||+|.+++.+ ++.+. ...+.++|.-.+.+
T Consensus 103 ~~fl~~i~~~tG~~ievIsG~EEA~l~~~gv~~~~~~~~~lvvDIGGGStEl~~~~--~~~~~---~~~Sl~lG~vrl~e 177 (508)
T 3hi0_A 103 PDFIREAEAILGCEIEVLSGEKEALYSAYGVISGFYQPDGIAGDLGGGSLELIDIK--DKSCG---EGITLPLGGLRLSE 177 (508)
T ss_dssp HHHHHHHHHHHTSCEEECCHHHHHHHHHHHHHHHSSSCEEEEEEECSSCEEEEEEE--TTEEC---CCEEESCCHHHHHH
T ss_pred HHHHHHHHHHHCCCeEEecHHHHHHHHHHHHHhcCCCCCeEEEEeCCCceEEEEee--CCeee---eEEEecceEEehhh
Confidence 455666667789987444445555444444322 122559999999999999975 43321 12246788887765
Q ss_pred H
Q 005807 280 A 280 (676)
Q Consensus 280 ~ 280 (676)
.
T Consensus 178 ~ 178 (508)
T 3hi0_A 178 Q 178 (508)
T ss_dssp H
T ss_pred c
Confidence 3
No 84
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=79.37 E-value=31 Score=37.69 Aligned_cols=79 Identities=16% Similarity=0.129 Sum_probs=53.2
Q ss_pred HHHHHHHHhH-HHHHHHHHHHHHHHHcCCCcCCCcEEEEEcCCcCcHHHHHHHHHHhCC-CCCC-CCCcchhHhhHHHHH
Q 005807 347 RSKFETLVNH-LIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIFGK-SPSK-GVNPDEAVALGAAIQ 423 (676)
Q Consensus 347 r~~fe~~~~~-~v~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~fg~-~~~~-~~~p~~aVa~GAal~ 423 (676)
..++-..++. +.+-+.+.+..+.+..+ ++.|+|.||.+....+++.|.+..+. .+.. +.-.|.++++|+|++
T Consensus 280 ~~dIAasfQ~~l~~~L~~~~~~a~~~tg-----~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~ 354 (576)
T 3ven_A 280 YRDLAATAQAALERAVFGLADSVLARTG-----ERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAA 354 (576)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHH
Confidence 3444444443 33334445555566544 58999999999999999999877553 2222 234578999999999
Q ss_pred hhhccCC
Q 005807 424 GGILRGD 430 (676)
Q Consensus 424 a~~l~~~ 430 (676)
+....+.
T Consensus 355 a~~~~g~ 361 (576)
T 3ven_A 355 VAVELGD 361 (576)
T ss_dssp HHHHTTC
T ss_pred HHHHcCC
Confidence 8766553
No 85
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=79.30 E-value=6.3 Score=42.04 Aligned_cols=57 Identities=12% Similarity=0.123 Sum_probs=39.6
Q ss_pred CHHHHHHHHHHHHHcCCCe--EEeeChhHHHHHhccccCCCCeEEEEeeCCceeEEEEEE
Q 005807 198 NDAQRQATKDAGRIAGLDV--QRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSVLE 255 (676)
Q Consensus 198 ~~~qr~~l~~Aa~~AGl~~--~~li~Ep~AAal~y~~~~~~~~vlV~D~GgGT~Dvsv~~ 255 (676)
...-.+.+++|...-|+++ +.++|+..|++++..... .+.++-+=+|-|+=-+-+..
T Consensus 171 g~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~~-~~~~iglIlGTG~na~yve~ 229 (451)
T 1bdg_A 171 GHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALED-PKCAVGLIVGTGTNVAYIED 229 (451)
T ss_dssp TSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTC-TTEEEEEEESSSEEEEEEEE
T ss_pred CCcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhcccC-CCcEEEEEEeCCcceEEEEc
Confidence 4556788888888778863 589999999999866553 23555556777754444443
No 86
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=78.61 E-value=1.4 Score=48.57 Aligned_cols=23 Identities=30% Similarity=0.453 Sum_probs=19.4
Q ss_pred CCCceEEEEcCCceEEEEEEECC
Q 005807 51 AGNDVIGVDLGTTNSCVAVMEGK 73 (676)
Q Consensus 51 ~~~~vvGID~GTt~s~va~~~~~ 73 (676)
.+++++|||+|||++++++++..
T Consensus 3 ~~~~~lgIDiGtts~ka~l~d~~ 25 (554)
T 3l0q_A 3 LASYFIGVDVGTGSARAGVFDLQ 25 (554)
T ss_dssp -CCEEEEEEECSSEEEEEEEETT
T ss_pred CCcEEEEEEECcccEEEEEECCC
Confidence 45689999999999999998753
No 87
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=74.75 E-value=5.2 Score=45.68 Aligned_cols=61 Identities=20% Similarity=0.338 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHcCCCcCCCcEEEEEcCCcCcHHHHHHHHHHh---CCCCCCCC---CcchhHhhHHHHHhhh
Q 005807 361 TKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF---GKSPSKGV---NPDEAVALGAAIQGGI 426 (676)
Q Consensus 361 i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~f---g~~~~~~~---~p~~aVa~GAal~a~~ 426 (676)
+.+.+..+.++. .++.|+|.||......+++.|.+.+ |.++..+. --|..+|.|+|++|+.
T Consensus 693 L~~~~~~a~~~t-----g~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~ 759 (772)
T 4g9i_A 693 FAHTAVERAREF-----GVKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGL 759 (772)
T ss_dssp HHHHHHHHHHTT-----TCSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-----CcCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHH
Confidence 344445555543 3578999999999999999999987 44555442 2388899999988865
No 88
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=74.45 E-value=7.2 Score=40.10 Aligned_cols=72 Identities=19% Similarity=0.241 Sum_probs=47.4
Q ss_pred HHHhHHHHHHHHHHHHHHHHcCCCcCCCcEEEEEcCCcCcHHHHHHHHHHhC-CCCCC----CCCcchhHhhHHHHHhhh
Q 005807 352 TLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIFG-KSPSK----GVNPDEAVALGAAIQGGI 426 (676)
Q Consensus 352 ~~~~~~v~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~fg-~~~~~----~~~p~~aVa~GAal~a~~ 426 (676)
++..-+.+-+...|.+.++... ..++.|+++||+++.|.|.++|++.++ .++.. .++|+..=|..-|++|..
T Consensus 260 Dv~ATLt~~TA~sIa~~~~~~~---~~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~aFA~LA~~ 336 (371)
T 3qbx_A 260 DIQATLLELSARSISESLLDAQ---PDCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMAFAWLAHR 336 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC---TTCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHHHHHHHHH
Confidence 4455555555566666665543 235799999999999999999999995 33221 234555555556666654
No 89
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=73.61 E-value=5.9 Score=44.17 Aligned_cols=64 Identities=9% Similarity=0.093 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHcCCCcCCCcEEEEEcCCcCcHHHHHHHHHHh-CCCCCC---CCCcchhHhhHHHHHhhh
Q 005807 358 IERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF-GKSPSK---GVNPDEAVALGAAIQGGI 426 (676)
Q Consensus 358 v~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~f-g~~~~~---~~~p~~aVa~GAal~a~~ 426 (676)
++.+.+.+.++.+.. .++.|+|+||.+...++++.|.+.+ |.++.. ..--|.+++.|.|+.|+.
T Consensus 584 a~~L~~~~~ra~~~~-----g~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 584 AQGFAALMREQATMR-----GITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 651 (657)
T ss_dssp HHHHHHHHHHHHHTT-----TCCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc-----CCCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 333444444444443 3589999999999999999999988 544332 334588999999998863
No 90
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=73.41 E-value=2.3 Score=47.13 Aligned_cols=21 Identities=29% Similarity=0.422 Sum_probs=18.5
Q ss_pred CCceEEEEcCCceEEEEEEEC
Q 005807 52 GNDVIGVDLGTTNSCVAVMEG 72 (676)
Q Consensus 52 ~~~vvGID~GTt~s~va~~~~ 72 (676)
+.+++|||+|||++++++++.
T Consensus 4 ~~~~lgIDiGTts~Ka~l~d~ 24 (572)
T 3jvp_A 4 TKYTIGVDYGTESGRAVLIDL 24 (572)
T ss_dssp -CEEEEEEECSSEEEEEEEET
T ss_pred CCEEEEEecCCcceEEEEEEC
Confidence 568999999999999999875
No 91
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=73.31 E-value=79 Score=31.66 Aligned_cols=44 Identities=32% Similarity=0.382 Sum_probs=29.8
Q ss_pred HHcCCCeEEeeChhHHHHHhcccc-------------CCCCeEEEEeeCCceeEEEEE
Q 005807 210 RIAGLDVQRIINEPTAAALSYGMN-------------NKEGLIAVFDLGGGTFDVSVL 254 (676)
Q Consensus 210 ~~AGl~~~~li~Ep~AAal~y~~~-------------~~~~~vlV~D~GgGT~Dvsv~ 254 (676)
+..|++.+.+.|+-.|+|++-... +..++++++-+|-|- -..++
T Consensus 99 ~~~~~p~V~v~NDanaaalgE~~~~~~~~~~~g~g~~~~~~~~~~v~~GTGi-G~giv 155 (332)
T 1sz2_A 99 KNLGFSHLEIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGTGL-GVAHL 155 (332)
T ss_dssp HHHTCSEEEEEEHHHHHHHHGGGCCGGGEEECSSCCCCTTCCEEEEEESSSE-EEEEE
T ss_pred HHhCCCcEEEEeCHhHHhccccccChhhheecCCCCCCCCCcEEEEEcCccc-eEEEE
Confidence 345888779999999999974321 122378888888883 34443
No 92
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=72.12 E-value=2.7 Score=46.16 Aligned_cols=23 Identities=17% Similarity=0.281 Sum_probs=19.3
Q ss_pred CCCceEEEEcCCceEEEEEEECC
Q 005807 51 AGNDVIGVDLGTTNSCVAVMEGK 73 (676)
Q Consensus 51 ~~~~vvGID~GTt~s~va~~~~~ 73 (676)
++.+++|||+|||++++++++..
T Consensus 8 ~~~~~lgID~GTts~Ka~l~d~~ 30 (538)
T 4bc3_A 8 PRRCCLGWDFSTQQVKVVAVDAE 30 (538)
T ss_dssp -CCEEEEEEECSSEEEEEEEETT
T ss_pred CCCEEEEEEEcCcCEEEEEECCC
Confidence 35689999999999999998753
No 93
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=72.01 E-value=2.9 Score=34.28 Aligned_cols=19 Identities=32% Similarity=0.316 Sum_probs=16.9
Q ss_pred ceEEEEcCCceEEEEEEEC
Q 005807 54 DVIGVDLGTTNSCVAVMEG 72 (676)
Q Consensus 54 ~vvGID~GTt~s~va~~~~ 72 (676)
.++|||+|+..+++|+.+.
T Consensus 2 riLglD~G~kriGvAvsd~ 20 (98)
T 1iv0_A 2 RVGALDVGEARIGLAVGEE 20 (98)
T ss_dssp CEEEEEESSSEEEEEEECS
T ss_pred cEEEEEeCCCEEEEEEEeC
Confidence 4899999999999999665
No 94
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=70.95 E-value=6.6 Score=44.65 Aligned_cols=63 Identities=19% Similarity=0.213 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHcCCCcCCCcEEEEEcCCcCcHHHHHHHHHHh---CCCCCCC---CCcchhHhhHHHHHhhhc
Q 005807 360 RTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIF---GKSPSKG---VNPDEAVALGAAIQGGIL 427 (676)
Q Consensus 360 ~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~f---g~~~~~~---~~p~~aVa~GAal~a~~l 427 (676)
.+.+.+.++.+..+ ++.|+|+||-+...+|++.|.+.+ |.++..+ .--|-++|.|.|++|+..
T Consensus 680 ~L~~~~~~a~~~~g-----~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~ 748 (761)
T 3vth_A 680 FTYDLANLIRKETG-----INKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKI 748 (761)
T ss_dssp HHHHHHHHHHHHHC-----CCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-----CCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHH
Confidence 33344444444433 579999999999999999999887 4443332 234889999999988754
No 95
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=68.54 E-value=2.9 Score=45.17 Aligned_cols=22 Identities=32% Similarity=0.323 Sum_probs=17.2
Q ss_pred CCceEEEEcCCceEEEEEEECC
Q 005807 52 GNDVIGVDLGTTNSCVAVMEGK 73 (676)
Q Consensus 52 ~~~vvGID~GTt~s~va~~~~~ 73 (676)
+++++|||+|||++++++++..
T Consensus 5 m~~~lgIDiGTts~Ka~l~d~~ 26 (482)
T 3h6e_A 5 TGATIVIDLGKTLSKVSLWDLD 26 (482)
T ss_dssp ---CEEEEECSSEEEEEEECTT
T ss_pred hceEEEEEcCCCCeEEEEEECC
Confidence 4589999999999999998743
No 96
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=67.93 E-value=3.4 Score=44.97 Aligned_cols=22 Identities=32% Similarity=0.466 Sum_probs=19.0
Q ss_pred CCceEEEEcCCceEEEEEEECC
Q 005807 52 GNDVIGVDLGTTNSCVAVMEGK 73 (676)
Q Consensus 52 ~~~vvGID~GTt~s~va~~~~~ 73 (676)
+++++|||+|||++++++++..
T Consensus 2 ~~~~lgIDiGtts~k~~l~d~~ 23 (510)
T 2p3r_A 2 KKYIVALDQGTTSSRAVVMDHD 23 (510)
T ss_dssp CCEEEEEEECSSEEEEEEECTT
T ss_pred CcEEEEEEcCCcceEEEEECCC
Confidence 4579999999999999998653
No 97
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=66.65 E-value=14 Score=43.08 Aligned_cols=55 Identities=15% Similarity=0.211 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHcC-CC--eEEeeChhHHHHHhccccCCCCeEEEEeeCCceeEEEEE
Q 005807 199 DAQRQATKDAGRIAG-LD--VQRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSVL 254 (676)
Q Consensus 199 ~~qr~~l~~Aa~~AG-l~--~~~li~Ep~AAal~y~~~~~~~~vlV~D~GgGT~Dvsv~ 254 (676)
..-++.+.++...-| ++ ++.++|+..|++++.... ..+.++.+=+|-|+=-.-+.
T Consensus 183 ~~v~~~L~~~l~r~g~~pv~~val~NDa~~tll~e~~~-~~~~~iglilGTGvngg~i~ 240 (917)
T 1cza_N 183 ADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYD-DQHCEVGLIIGTGTNACYME 240 (917)
T ss_dssp SBHHHHHHHHHHHHCSCCCCEEEEECHHHHHHHHHHHH-CTTEEEEEEESSSEEEEEEE
T ss_pred CchHHHHHHHHhhcCCCCceEEEEEEhhHHHHHHhhcc-CCCcEEEEEEECCcceEEEe
Confidence 355677778877666 64 689999999999976554 22366666677775444343
No 98
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=66.63 E-value=3.1 Score=45.01 Aligned_cols=21 Identities=24% Similarity=0.335 Sum_probs=18.4
Q ss_pred CCceEEEEcCCceEEEEEEEC
Q 005807 52 GNDVIGVDLGTTNSCVAVMEG 72 (676)
Q Consensus 52 ~~~vvGID~GTt~s~va~~~~ 72 (676)
++.++|||+|||++++++++.
T Consensus 3 ~~~~lgiDiGtts~k~~l~d~ 23 (489)
T 2uyt_A 3 FRNCVAVDLGASSGRVMLARY 23 (489)
T ss_dssp CEEEEEEEECSSEEEEEEEEE
T ss_pred cceEEEEEecCCCceEEEEEe
Confidence 557999999999999999863
No 99
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=66.02 E-value=16 Score=42.79 Aligned_cols=57 Identities=14% Similarity=0.162 Sum_probs=38.1
Q ss_pred CHHHHHHHHHHHHHc-CC--CeEEeeChhHHHHHhccccCCCCeEEEEeeCCceeEEEEEE
Q 005807 198 NDAQRQATKDAGRIA-GL--DVQRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSVLE 255 (676)
Q Consensus 198 ~~~qr~~l~~Aa~~A-Gl--~~~~li~Ep~AAal~y~~~~~~~~vlV~D~GgGT~Dvsv~~ 255 (676)
...-.+.+++|...- ++ +++.++|+..|++++...... +.++-+=+|-|+=-+-+..
T Consensus 630 g~dv~~~L~~al~r~~~~~v~~val~NDtv~tlla~~y~~~-~~~iglIlGTG~na~y~e~ 689 (917)
T 1cza_N 630 GHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEEP-TCEVGLIVGTGSNACYMEE 689 (917)
T ss_dssp TSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTCT-TEEEEEEESSSEEEEEEEE
T ss_pred CCcHHHHHHHHHHhcCCCCceEEEEEEccHHHHHHhccCCC-CcEEEEEEeCCeeEEEEEc
Confidence 445577788887654 55 588999999999998665532 3555555677765444443
No 100
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=65.10 E-value=4.1 Score=44.14 Aligned_cols=21 Identities=24% Similarity=0.273 Sum_probs=17.8
Q ss_pred CceEEEEcCCceEEEEEEECC
Q 005807 53 NDVIGVDLGTTNSCVAVMEGK 73 (676)
Q Consensus 53 ~~vvGID~GTt~s~va~~~~~ 73 (676)
.+++|||+|||++++++++..
T Consensus 2 ~~~lgiDiGtT~~k~~l~d~~ 22 (495)
T 2dpn_A 2 AFLLALDQGTTSSRAILFTLE 22 (495)
T ss_dssp -CEEEEEECSSEEEEEEECTT
T ss_pred cEEEEEeeCCcceEEEEECCC
Confidence 468999999999999998653
No 101
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=64.47 E-value=4.3 Score=44.03 Aligned_cols=21 Identities=19% Similarity=0.319 Sum_probs=18.5
Q ss_pred CceEEEEcCCceEEEEEEECC
Q 005807 53 NDVIGVDLGTTNSCVAVMEGK 73 (676)
Q Consensus 53 ~~vvGID~GTt~s~va~~~~~ 73 (676)
.+++|||+|||++++++++..
T Consensus 4 ~~~lgIDiGtT~~k~~l~d~~ 24 (503)
T 2w40_A 4 NVILSIDQSTQSTKVFFYDEE 24 (503)
T ss_dssp EEEEEEEECSSEEEEEEEETT
T ss_pred cEEEEEEeCCcceEEEEECCC
Confidence 478999999999999998754
No 102
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=64.44 E-value=50 Score=35.82 Aligned_cols=47 Identities=4% Similarity=0.016 Sum_probs=34.0
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHcCCCeEEe-eChhHHHHHhcccc
Q 005807 187 SEAVITVPAYFNDAQRQATKDAGRIAGLDVQRI-INEPTAAALSYGMN 233 (676)
Q Consensus 187 ~~~VITVPa~~~~~qr~~l~~Aa~~AGl~~~~l-i~Ep~AAal~y~~~ 233 (676)
..++.-+|..++...-.++.+++...|+++... +---.+..+.-.+.
T Consensus 131 ~~~I~v~~~~i~~~d~a~~in~a~~~g~~i~~~i~q~dd~vli~nrl~ 178 (607)
T 1nbw_A 131 EGWIVLIDDAVDFLDAVWWLNEALDRGINVVAAILKKDDGVLVNNRLR 178 (607)
T ss_dssp TCEEEEECSSSCHHHHHHHHHHHHHTTCCEEEEEESSSCHHHHHTTSS
T ss_pred CCEEEECCCccCHHHHHHHHHHHHHcCCcEEEEEEecCCEEEEcccCC
Confidence 345555999999999999999999999987653 34444444544333
No 103
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=63.93 E-value=7.5 Score=34.04 Aligned_cols=21 Identities=29% Similarity=0.362 Sum_probs=18.4
Q ss_pred ceEEEEcCCceEEEEEEECCc
Q 005807 54 DVIGVDLGTTNSCVAVMEGKN 74 (676)
Q Consensus 54 ~vvGID~GTt~s~va~~~~~~ 74 (676)
.++|||+|+..+++|+.+..+
T Consensus 4 ~iLglD~G~kriGvAvsd~~~ 24 (138)
T 1nu0_A 4 TLMAFDFGTKSIGVAVGQRIT 24 (138)
T ss_dssp EEEEEECCSSEEEEEEEETTT
T ss_pred eEEEEEeCCCEEEEEEEcCCC
Confidence 599999999999999987643
No 104
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=63.88 E-value=13 Score=38.26 Aligned_cols=72 Identities=15% Similarity=0.161 Sum_probs=47.2
Q ss_pred HHHHhHHHHHHHHHHHHHHHHcCCCcCCCcEEEEEcCCcCcHHHHHHHHHHhCC-CCC----CCCCcchhHhhHHHHHhh
Q 005807 351 ETLVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIFGK-SPS----KGVNPDEAVALGAAIQGG 425 (676)
Q Consensus 351 e~~~~~~v~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~fg~-~~~----~~~~p~~aVa~GAal~a~ 425 (676)
+++..-+.+-+...|.+.++... ..+.|+++||+++.|.|.++|++.++. ++. ..++|+..=|..-|++|.
T Consensus 266 ~Dv~ATLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aFA~LA~ 341 (370)
T 3cqy_A 266 EDIQSTLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAFAWLAM 341 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHHHHHHH
Confidence 35555666666666666666542 356999999999999999999999943 322 123444444444466665
Q ss_pred h
Q 005807 426 I 426 (676)
Q Consensus 426 ~ 426 (676)
.
T Consensus 342 ~ 342 (370)
T 3cqy_A 342 R 342 (370)
T ss_dssp H
T ss_pred H
Confidence 4
No 105
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=61.68 E-value=5.3 Score=43.27 Aligned_cols=21 Identities=24% Similarity=0.396 Sum_probs=18.3
Q ss_pred CceEEEEcCCceEEEEEEECC
Q 005807 53 NDVIGVDLGTTNSCVAVMEGK 73 (676)
Q Consensus 53 ~~vvGID~GTt~s~va~~~~~ 73 (676)
.+++|||+|||++++++++..
T Consensus 3 ~~~lgiDiGtt~~k~~l~d~~ 23 (497)
T 2zf5_O 3 KFVLSLDEGTTSARAIIFDRE 23 (497)
T ss_dssp CEEEEEEECSSEEEEEEECTT
T ss_pred cEEEEEecCCchhEEEEECCC
Confidence 479999999999999998753
No 106
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=61.67 E-value=5.3 Score=43.32 Aligned_cols=21 Identities=29% Similarity=0.458 Sum_probs=18.5
Q ss_pred CceEEEEcCCceEEEEEEECC
Q 005807 53 NDVIGVDLGTTNSCVAVMEGK 73 (676)
Q Consensus 53 ~~vvGID~GTt~s~va~~~~~ 73 (676)
++++|||+|||++++++++..
T Consensus 6 ~~~lgIDiGtts~k~~l~d~~ 26 (501)
T 3g25_A 6 KYILSIDQGTTSSRAILFNQK 26 (501)
T ss_dssp CEEEEEEECSSEEEEEEECTT
T ss_pred cEEEEEEeCccceEEEEEcCC
Confidence 489999999999999998653
No 107
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=61.49 E-value=4.8 Score=35.85 Aligned_cols=20 Identities=35% Similarity=0.557 Sum_probs=17.5
Q ss_pred CceEEEEcCCceEEEEEEEC
Q 005807 53 NDVIGVDLGTTNSCVAVMEG 72 (676)
Q Consensus 53 ~~vvGID~GTt~s~va~~~~ 72 (676)
+.++|||+|+..+++|+.+.
T Consensus 3 mriLGiDpG~~riGvAv~d~ 22 (150)
T 1vhx_A 3 LRILGLDLGTKTLGVALSDE 22 (150)
T ss_dssp EEEEEEEECSSEEEEEEECT
T ss_pred CEEEEEEccCCEEEEEEEEC
Confidence 35999999999999999764
No 108
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=60.31 E-value=11 Score=38.61 Aligned_cols=17 Identities=24% Similarity=0.591 Sum_probs=16.1
Q ss_pred eEEEEeeCCceeEEEEE
Q 005807 238 LIAVFDLGGGTFDVSVL 254 (676)
Q Consensus 238 ~vlV~D~GgGT~Dvsv~ 254 (676)
+++|+|+|||++.++..
T Consensus 141 t~~v~DiGGGStei~~~ 157 (353)
T 3aap_A 141 SVGVMDMGGASVQIVFP 157 (353)
T ss_dssp CEEEEEECSSEEEEEEE
T ss_pred cEEEEEeCCCceEEEEe
Confidence 69999999999999986
No 109
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=59.66 E-value=53 Score=34.87 Aligned_cols=20 Identities=20% Similarity=0.208 Sum_probs=17.3
Q ss_pred CCceEEEEcCCceEEEEEEE
Q 005807 52 GNDVIGVDLGTTNSCVAVME 71 (676)
Q Consensus 52 ~~~vvGID~GTt~s~va~~~ 71 (676)
..+++.||.||+.+.+-+++
T Consensus 33 ~~y~~vID~GSns~Rl~Vy~ 52 (456)
T 3cj1_A 33 LKYGIVLDAGSSHTSMFVYK 52 (456)
T ss_dssp EEEEEEEEECSSCEEEEEEE
T ss_pred ceEEEEEEcCCCCeEEEEEE
Confidence 45789999999999998875
No 110
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=59.65 E-value=6.9 Score=38.46 Aligned_cols=20 Identities=20% Similarity=0.484 Sum_probs=18.4
Q ss_pred ceEEEEcCCceEEEEEEECC
Q 005807 54 DVIGVDLGTTNSCVAVMEGK 73 (676)
Q Consensus 54 ~vvGID~GTt~s~va~~~~~ 73 (676)
++++||+|+|++++++++++
T Consensus 3 MlL~IDIGNT~iK~gl~d~~ 22 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFDGD 22 (266)
T ss_dssp CEEEEEECSSEEEEEEEETT
T ss_pred eEEEEEECCCeEEEEEEECC
Confidence 58999999999999999875
No 111
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=56.96 E-value=78 Score=27.94 Aligned_cols=103 Identities=17% Similarity=0.269 Sum_probs=57.4
Q ss_pred eccCCCCCHHHHHHHHHHHHHhhHhHHHHHHHHHH----------------HHHHHHH---HHHHHHHHhhhhcCCCH--
Q 005807 546 IRSSGGLSESEIEKMVKEAELHAQRDQERKTLIDI----------------RNNADTT---IYSIEKSLGEYREKIPG-- 604 (676)
Q Consensus 546 i~~~~~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~----------------~n~le~~---i~~~~~~l~~~~~~~~~-- 604 (676)
+....+...+++-+...++++-.-.|...|+++.. +...+.+ +.+....|.+|-..+..
T Consensus 16 ~~~~~p~~~~elik~L~~le~sassDa~vrq~Ia~LP~eVsd~s~l~klkDk~~~e~l~~~veeA~~~L~eYn~rL~~E~ 95 (152)
T 4fla_A 16 FQGAGPLLTEELIKALQDLENAASGDATVRQKIASLPQEVQDVSLLEKITDKEAAERLSKTVDEACLLLAEYNGRLAAEL 95 (152)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGTCGGGGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHhhccccchHHHHHHHHcCCccccCHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334455667777777777777777776665544 2333333 33334444444333332
Q ss_pred HHHHHHHHHHHHHHHhhccC------ChHHHHHHHHHHHHHHHHHHHHHh
Q 005807 605 EVAKEIEDAVSDLRKAMAGE------DIDGIKAKLDAANKAVSKIGQHMA 648 (676)
Q Consensus 605 ~~~~~~~~~~~~~~~wl~~~------~~~~~~~~~~~L~~~~~~i~~~~~ 648 (676)
++|..+.+.|.+........ ..++|+.+++.+.....++-..+-
T Consensus 96 ~dR~~L~~~L~~~~~~~~~~l~e~e~~leeyK~Kl~rv~~vkkeL~~hi~ 145 (152)
T 4fla_A 96 EDRRQLARMLVEYTQNQKDVLSEKEKKLEEYKQKLARVTQVRKELKSHIQ 145 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 67777888887776543322 167888888877777777665543
No 112
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=56.07 E-value=7.2 Score=38.81 Aligned_cols=22 Identities=18% Similarity=0.243 Sum_probs=17.6
Q ss_pred CCceEEEEcCCceEEEEEEECC
Q 005807 52 GNDVIGVDLGTTNSCVAVMEGK 73 (676)
Q Consensus 52 ~~~vvGID~GTt~s~va~~~~~ 73 (676)
..+.+|||+|+|.+++++.+++
T Consensus 19 ~~~~iGIDiGsTt~K~V~~~~~ 40 (287)
T 2ews_A 19 SHMKVGIDAGGTLIKIVQEQDN 40 (287)
T ss_dssp --CEEEEEECSSEEEEEEECSS
T ss_pred CCeEEEEEEChhhEEEEEEcCC
Confidence 3578999999999999997543
No 113
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=54.91 E-value=13 Score=33.32 Aligned_cols=18 Identities=22% Similarity=0.466 Sum_probs=16.4
Q ss_pred ceEEEEcCCceEEEEEEE
Q 005807 54 DVIGVDLGTTNSCVAVME 71 (676)
Q Consensus 54 ~vvGID~GTt~s~va~~~ 71 (676)
.|+|||.|+++++.++.+
T Consensus 2 ~ILGIDPGl~~tG~gvi~ 19 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVIR 19 (158)
T ss_dssp EEEEEECCSSEEEEEEEE
T ss_pred EEEEEccCCCCeeEEEEE
Confidence 589999999999999975
No 114
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=54.86 E-value=7.9 Score=41.69 Aligned_cols=20 Identities=35% Similarity=0.572 Sum_probs=17.2
Q ss_pred ceEEEEcCCceEEEEEEECC
Q 005807 54 DVIGVDLGTTNSCVAVMEGK 73 (676)
Q Consensus 54 ~vvGID~GTt~s~va~~~~~ 73 (676)
+++|||+|||++++++++..
T Consensus 1 ~~lgiDiGtt~~k~~l~d~~ 20 (484)
T 2itm_A 1 MYIGIDLGTSGVKVILLNEQ 20 (484)
T ss_dssp CEEEEEECSSEEEEEEECTT
T ss_pred CEEEEEecCcccEEEEECCC
Confidence 37999999999999998653
No 115
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=54.80 E-value=8.7 Score=38.82 Aligned_cols=38 Identities=18% Similarity=0.086 Sum_probs=26.7
Q ss_pred EEeeChhHHHHHhccccCCCCeEEEEeeCCceeEEEEEE
Q 005807 217 QRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSVLE 255 (676)
Q Consensus 217 ~~li~Ep~AAal~y~~~~~~~~vlV~D~GgGT~Dvsv~~ 255 (676)
.....-|.|.|...+.. ..+..+++|+||.|||+..+.
T Consensus 108 ~~aaanw~ASa~~~A~~-~~~~~llvDIGsTTTDIipi~ 145 (334)
T 3cet_A 108 KVSASNWCGTAKWVSKN-IEENCILVDMGSTTTDIIPIV 145 (334)
T ss_dssp GTBCCSSHHHHHHHHHH-TCSSEEEEEECSSCEEEEEEE
T ss_pred HHHhcCHHHHHHHHHHh-cCCCEEEEEcCcchhhhhhhc
Confidence 34566777777733333 213689999999999999875
No 116
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=52.51 E-value=8.9 Score=41.54 Aligned_cols=20 Identities=35% Similarity=0.473 Sum_probs=17.7
Q ss_pred ceEEEEcCCceEEEEEEECC
Q 005807 54 DVIGVDLGTTNSCVAVMEGK 73 (676)
Q Consensus 54 ~vvGID~GTt~s~va~~~~~ 73 (676)
+++|||+|||++++++++..
T Consensus 3 ~~lgiDiGtts~k~~l~d~~ 22 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDHS 22 (504)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred EEEEEecCCcceEEEEECCC
Confidence 68999999999999998653
No 117
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=51.01 E-value=10 Score=34.33 Aligned_cols=19 Identities=32% Similarity=0.377 Sum_probs=16.9
Q ss_pred ceEEEEcCCceEEEEEEEC
Q 005807 54 DVIGVDLGTTNSCVAVMEG 72 (676)
Q Consensus 54 ~vvGID~GTt~s~va~~~~ 72 (676)
.|+|||.|++.++.++.+.
T Consensus 2 rILGIDPGl~~tG~gvi~~ 20 (166)
T 4ep4_A 2 VVAGIDPGITHLGLGVVAV 20 (166)
T ss_dssp EEEEEECCSSEEEEEEEEE
T ss_pred EEEEEccccCceEEEEEEe
Confidence 5899999999999999753
No 118
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=46.04 E-value=85 Score=23.79 Aligned_cols=39 Identities=28% Similarity=0.254 Sum_probs=24.5
Q ss_pred HHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC
Q 005807 564 AELHAQRDQERKTLIDIRNNADTTIYSIEKSLGEYREKI 602 (676)
Q Consensus 564 ~~~~~~~d~~~~~~~~~~n~le~~i~~~~~~l~~~~~~~ 602 (676)
.++....|...+++.....+.+..|..+++.|..|+..+
T Consensus 32 ~eELr~kd~~I~eLEk~L~ekd~eI~~LqseLDKfrSVl 70 (72)
T 3nmd_A 32 IEELRQRDALIDELELELDQKDELIQMLQNELDKYRSVI 70 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 455556666666666666666777777777776655433
No 119
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=45.53 E-value=14 Score=36.81 Aligned_cols=64 Identities=17% Similarity=0.139 Sum_probs=41.1
Q ss_pred HhHHHHHHHHHHHHHHHHcCCCcCCCcEEEEEcCCcC--cHHHHHHHHHHhCCCCCCCCCcchhHhhHHHHHhhh
Q 005807 354 VNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTR--VPKVQEIVTEIFGKSPSKGVNPDEAVALGAAIQGGI 426 (676)
Q Consensus 354 ~~~~v~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~--~p~i~~~l~~~fg~~~~~~~~p~~aVa~GAal~a~~ 426 (676)
+..++++..+.+-..+...-. . +...|+|.||.+. .|.+.+.+++.+ ..|+.+.+.||++++..
T Consensus 228 A~~i~~~~~~~L~~~l~~l~~-~-~p~~VvlgGgv~~~~~~~l~~~l~~~i-------~~~~~~~~~GAa~la~~ 293 (305)
T 1zc6_A 228 ADALLRQAGEDAWAIARALDP-Q-DELPVALCGGLGQALRDWLPPGFRQRL-------VAPQGDSAQGALLLLQR 293 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHCT-T-CCSCEEEESHHHHHTGGGSCHHHHHHC-------CCCSSCHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHHHHHhc-C-CCCeEEEECCchHhHHHHHHHHHHhhc-------cCCCCCHHHHHHHHHhh
Confidence 445555555555555554332 2 5678999999864 567777777653 12567789999998763
No 120
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=45.32 E-value=46 Score=32.65 Aligned_cols=42 Identities=17% Similarity=0.147 Sum_probs=27.9
Q ss_pred HcCCCeEEeeChhHHHHHhcccc-CCCCeEEEEeeCCceeEEEEE
Q 005807 211 IAGLDVQRIINEPTAAALSYGMN-NKEGLIAVFDLGGGTFDVSVL 254 (676)
Q Consensus 211 ~AGl~~~~li~Ep~AAal~y~~~-~~~~~vlV~D~GgGT~Dvsv~ 254 (676)
..|++ +.+.|+..|||++.... +..++++++-+|.| +-..++
T Consensus 93 ~~~~p-v~v~NDa~aaa~~e~~~~~~~~~~v~l~~GtG-iG~giv 135 (292)
T 2gup_A 93 SYQLP-VHLENDANCVGLSELLAHPELENAACVVIGTG-IGGAMI 135 (292)
T ss_dssp GGCCC-EEEEEHHHHHHHHHHHHCTTCSSEEEEEESSS-EEEEEE
T ss_pred HcCCC-EEEechHHHHHHHHHHhcCCCCeEEEEEECCc-eEEEEE
Confidence 45776 68999999999874331 22237888888887 444443
No 121
>1h7c_A Tubulin-specific chaperone A; protein folding, cofactor A; 1.8A {Homo sapiens} SCOP: a.7.5.1
Probab=44.28 E-value=1.3e+02 Score=24.86 Aligned_cols=81 Identities=17% Similarity=0.263 Sum_probs=47.0
Q ss_pred HHHHHHHHHHhhHhHHHHHHHHHHH-HH-H-HHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHhhccC----ChHHH
Q 005807 557 IEKMVKEAELHAQRDQERKTLIDIR-NN-A-DTTIYSIEKSLGEYREKIPGEVAKEIEDAVSDLRKAMAGE----DIDGI 629 (676)
Q Consensus 557 i~~~~~~~~~~~~~d~~~~~~~~~~-n~-l-e~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wl~~~----~~~~~ 629 (676)
+.++.++..-|.++-....++.+.. .+ - +.-|-.-+..|.+.. .+-++-+.+|..++.+++++|..+ +.+++
T Consensus 16 vkRL~KE~~~Y~kE~~~q~~riek~k~e~~Dey~iKkq~evl~Et~-~mipd~~~Rl~~a~~~L~~~l~~e~~~~~~ee~ 94 (108)
T 1h7c_A 16 VRRLVKERVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESR-MMIPDCQRRLEAAYLDLQRILENEKDLEEAEEY 94 (108)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCTHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHHCGGGTTSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHHHHHHhcccCCCcHHH
Confidence 4667777777766554444443332 21 1 223334444444443 344667779999999999999743 35666
Q ss_pred HHHHHHHHH
Q 005807 630 KAKLDAANK 638 (676)
Q Consensus 630 ~~~~~~L~~ 638 (676)
....+.|..
T Consensus 95 ~~Ake~l~~ 103 (108)
T 1h7c_A 95 KEARLVLDS 103 (108)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666555543
No 122
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=43.27 E-value=31 Score=33.80 Aligned_cols=47 Identities=19% Similarity=0.219 Sum_probs=33.0
Q ss_pred CcEEEEEcCCcCcHHHHHHHHHHhCCCC-------CCCCCcchhHhhHHHHHhh
Q 005807 379 VDEVLLVGGMTRVPKVQEIVTEIFGKSP-------SKGVNPDEAVALGAAIQGG 425 (676)
Q Consensus 379 i~~ViLvGG~s~~p~i~~~l~~~fg~~~-------~~~~~p~~aVa~GAal~a~ 425 (676)
++.|+|.||.+..+.+.+.+++.+.... ......+.+.++|||.++.
T Consensus 234 p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~ 287 (289)
T 2aa4_A 234 CQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLAQ 287 (289)
T ss_dssp CSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHHh
Confidence 4689999998877888888888775321 1223446688999998753
No 123
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=42.96 E-value=10 Score=37.64 Aligned_cols=68 Identities=6% Similarity=-0.139 Sum_probs=41.9
Q ss_pred HHhHHHHHHHHHHHHHHHHcCCCcCCCcEEEEEcCCcCc--HHHHHHHHHHhCCCCCCCCCcchhHhhHHHHHhhh
Q 005807 353 LVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRV--PKVQEIVTEIFGKSPSKGVNPDEAVALGAAIQGGI 426 (676)
Q Consensus 353 ~~~~~v~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~--p~i~~~l~~~fg~~~~~~~~p~~aVa~GAal~a~~ 426 (676)
....++++..+.+-..+ ...+ ..+.+.|+|.||-+.. +.+++.+++.. .....|..+...||+.++..
T Consensus 211 ~A~~i~~~~~~~La~~i-~~~~-~~~p~~vvlgGGv~~~~~~~l~~~l~~~~----~~i~~~~~a~~~GA~~la~~ 280 (291)
T 1zbs_A 211 AVYSLVQNSFDDFLVRN-VLRY-NRPDLPLHFIGSVAFHYREVLSSVIKKRG----LTLGSVLQSPMEGLIQYHHN 280 (291)
T ss_dssp HHHHHHHHHHHHHHHHH-TGGG-CCTTSCEEEESHHHHHTHHHHHHHHHHTT----CCEEEEESCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-hccc-CCCCceEEEECchHHhhHHHHHHHHHHcC----CeecccCcCHHHHHHHHHHh
Confidence 34455555555555555 2221 1156789999998876 56666665532 12234668899999998864
No 124
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=41.92 E-value=22 Score=35.37 Aligned_cols=56 Identities=11% Similarity=0.011 Sum_probs=35.0
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHc--CCCeEEeeChhHHHHHhccccCCCCeEEEEeeCCcee
Q 005807 187 SEAVITVPAYFNDAQRQATKDAGRIA--GLDVQRIINEPTAAALSYGMNNKEGLIAVFDLGGGTF 249 (676)
Q Consensus 187 ~~~VITVPa~~~~~qr~~l~~Aa~~A--Gl~~~~li~Ep~AAal~y~~~~~~~~vlV~D~GgGT~ 249 (676)
..+.|++|..-+......+.. .. ++ .+.+.|+-.||+++-. .....+++=+|-|..
T Consensus 77 ~~igig~pG~v~~~~~~~l~~---~~~~~~-pv~v~NDa~aaa~ge~---~~~~~v~v~~GTGig 134 (305)
T 1zc6_A 77 CAIGLGLSGVHNRQWAGEFES---QAPGFA-RLSLATDGYTTLLGAH---GGQPGIIVALGTGSI 134 (305)
T ss_dssp EEEEEEESCCCTTSHHHHHHH---TCCCCS-EEEEECHHHHHHHHHT---TTSSEEEEEESSSEE
T ss_pred ceEEEEecCCCchHHHHHHHH---hCCCCc-eEEEECCHHHHHHhhc---CCCCeEEEEecCCeE
Confidence 457899998876544333222 22 33 4689999999988642 123556666787763
No 125
>2pih_A Protein YMCA; regulate community development, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: a.281.1.1
Probab=40.18 E-value=1.9e+02 Score=25.30 Aligned_cols=57 Identities=11% Similarity=0.222 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHhhccCC-hHHHHHHHHHHHHHHHHHHHH--------HhcCCCCCCCCCCCCC
Q 005807 606 VAKEIEDAVSDLRKAMAGED-IDGIKAKLDAANKAVSKIGQH--------MAGGSSDNSASGGSQG 662 (676)
Q Consensus 606 ~~~~~~~~~~~~~~wl~~~~-~~~~~~~~~~L~~~~~~i~~~--------~~~~~~~~~~~g~~~~ 662 (676)
.-++..+.+.++.+-++.+. ..+|.++-.+|...+..|... +.-..|++-++|.+..
T Consensus 67 ~~~e~~~el~~l~~~l~~np~V~~y~~Ae~~l~~LL~~I~~iI~~~I~~~i~v~tg~p~~~~~~~~ 132 (151)
T 2pih_A 67 ALKQVEAKIDALQEELEEIPVIQEFRDSQMEVNDLLQLVAHTISNQVTNEIITSTGGDLLKGETGS 132 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCC--------
T ss_pred chHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCcccccCCC
Confidence 45666777777777777665 677776666666555444432 2233456666666653
No 126
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=40.04 E-value=1.5e+02 Score=30.91 Aligned_cols=47 Identities=15% Similarity=0.198 Sum_probs=33.2
Q ss_pred HHhHHHHHHHHHHHHHHHHcCCCcCCCcEEEEEcCCc-CcHHHHHHHHHHh
Q 005807 353 LVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMT-RVPKVQEIVTEIF 402 (676)
Q Consensus 353 ~~~~~v~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~~p~i~~~l~~~f 402 (676)
.++-++.++.+.|-......+ ..+|.|+++||-+ ..+.||+.+.+.+
T Consensus 317 A~d~f~yri~k~IGa~aa~L~---G~vDaIVFTgGIGEns~~vR~~v~~~l 364 (415)
T 3sk3_A 317 AMDVYCHRLAKYIGSYTALMD---GRLDAVVFTGGIGENAAMVRELSLGKL 364 (415)
T ss_dssp HHHHHHHHHHHHHHHGGGGST---TCCCEEEEEHHHHTTCHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHhC---CCCCEEEECCccccCCHHHHHHHHhhc
Confidence 445555566555555444332 3589999999998 6999999998766
No 127
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=39.93 E-value=1.6e+02 Score=24.24 Aligned_cols=45 Identities=2% Similarity=0.151 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHhcC
Q 005807 605 EVAKEIEDAVSDLRKAMAGEDIDGIKAKLDAANKAVSKIGQHMAGG 650 (676)
Q Consensus 605 ~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~L~~~~~~i~~~~~~~ 650 (676)
.+++++...|.+-.+-++.. .+.+..+++.+++....+-..++..
T Consensus 66 ~~~~ea~~~L~~~~e~ie~~-i~~le~~~~~l~~~l~~lk~~l~~~ 110 (117)
T 2zqm_A 66 TTKDKAVAELKEKIETLEVR-LNALERQEKKLNEKLKELTAQIQSA 110 (117)
T ss_dssp ECHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556666666666555543 6777777777777777777777753
No 128
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=37.57 E-value=39 Score=33.62 Aligned_cols=50 Identities=12% Similarity=0.128 Sum_probs=40.4
Q ss_pred HHhHHHHHHHHHHHHHHHHcCCCcCCCcEEEEEcCCcCcHHHHHHHHHHhCCC
Q 005807 353 LVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIFGKS 405 (676)
Q Consensus 353 ~~~~~v~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~fg~~ 405 (676)
+++..++.+.+.++++|+++++++++|+.|+.-|+++++ -+.+.+.||.+
T Consensus 212 ~~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg~~ 261 (317)
T 1hnj_A 212 VFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRI---ISATAKKLGMS 261 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHHH---HHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCCC
Confidence 444556678889999999999999999999999987654 45788888854
No 129
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=37.53 E-value=26 Score=34.64 Aligned_cols=61 Identities=15% Similarity=0.037 Sum_probs=36.5
Q ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHH-HcCC-CeEEeeChhHHHHHhccccCCCCeEEEEeeCCcee
Q 005807 185 SVSEAVITVPAYFNDAQRQATKDAGR-IAGL-DVQRIINEPTAAALSYGMNNKEGLIAVFDLGGGTF 249 (676)
Q Consensus 185 ~~~~~VITVPa~~~~~qr~~l~~Aa~-~AGl-~~~~li~Ep~AAal~y~~~~~~~~vlV~D~GgGT~ 249 (676)
++..+.|++|..- ......+++..+ ..++ ..+.+.|+..||+++-. .....+++=+|-|.-
T Consensus 59 ~i~~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~---g~~~~v~v~~GTGig 121 (291)
T 1zbs_A 59 SIRAVYFYGAGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALC---GDSEGIACILGTGSN 121 (291)
T ss_dssp TCCEEEEEETTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHT---TTSCEEEEEESSSEE
T ss_pred cccEEEEECCCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhc---CCCCcEEEEecCChh
Confidence 4567889999864 222223444433 3454 36899999999998732 122444444676653
No 130
>2hc5_A ORF 99, hypothetical protein YVYC; NESG, GFT-PSI, protein structure initiative, northeast structural genomics consortium, alpha-beta, FLAG; NMR {Bacillus subtilis} SCOP: d.352.1.1
Probab=35.10 E-value=58 Score=27.37 Aligned_cols=43 Identities=7% Similarity=0.096 Sum_probs=32.8
Q ss_pred eEEEEEEcC-CccEEEEEEecCCCceeeEEeccCCCCCHHHHHHHHHHHHH
Q 005807 517 IEVTFDIDA-NGIVTVSAKDKATGKEQQITIRSSGGLSESEIEKMVKEAEL 566 (676)
Q Consensus 517 i~v~f~~d~-~g~l~v~~~~~~t~~~~~~~i~~~~~~~~~~i~~~~~~~~~ 566 (676)
..+.|.+|. .|.+.|.+.|..||+... .+.++++-++.+...+
T Consensus 56 ~~L~F~vdee~~~~vVkVvD~~TgEVIR-------qIPpEe~L~l~~~l~e 99 (117)
T 2hc5_A 56 VHLKFELHDKLNEYYVKVIEDSTNEVIR-------EIPPKRWLDFYAAMTE 99 (117)
T ss_dssp CCEEEEEEEETTEEEEEEEETTTTEEEE-------EECHHHHHHHHHHHHH
T ss_pred CceEEEEecCCCcEEEEEEECCCCcEEE-------eCChHHHHHHHHHHHH
Confidence 468888986 688999999999998643 3567787777666554
No 131
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=35.08 E-value=59 Score=33.47 Aligned_cols=49 Identities=24% Similarity=0.237 Sum_probs=33.5
Q ss_pred CCcEEEEEcCCcCcHH-HHHHHHHHhCCC--C-CC-CCCcchhHhhHHHHHhhh
Q 005807 378 DVDEVLLVGGMTRVPK-VQEIVTEIFGKS--P-SK-GVNPDEAVALGAAIQGGI 426 (676)
Q Consensus 378 ~i~~ViLvGG~s~~p~-i~~~l~~~fg~~--~-~~-~~~p~~aVa~GAal~a~~ 426 (676)
+++.|+|.||.+..+. +.+.+++.+... + +. ......+.+.||+..+..
T Consensus 295 ~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~~~ 348 (381)
T 1saz_A 295 EVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVLRG 348 (381)
T ss_dssp CCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHHcC
Confidence 5689999999987544 788888877532 1 11 222335899999987643
No 132
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=34.81 E-value=30 Score=33.91 Aligned_cols=20 Identities=30% Similarity=0.559 Sum_probs=17.7
Q ss_pred eEEEEcCCceEEEEEEECCc
Q 005807 55 VIGVDLGTTNSCVAVMEGKN 74 (676)
Q Consensus 55 vvGID~GTt~s~va~~~~~~ 74 (676)
++.||.|+|+++.++++++.
T Consensus 2 lL~IDIGNT~ik~gl~~~~~ 21 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFEEGE 21 (268)
T ss_dssp EEEEEECSSEEEEEEEETTE
T ss_pred EEEEEECcCcEEEEEEECCE
Confidence 68999999999999998653
No 133
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=34.00 E-value=8.1 Score=38.38 Aligned_cols=68 Identities=9% Similarity=-0.055 Sum_probs=39.8
Q ss_pred hHHHHHHHHHHHHHHHHcCCCcCCCcEEEEEcCCcCcHHHHHHHHHHhCCCCCCCCCcchhHhhHHHHHhhh
Q 005807 355 NHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIFGKSPSKGVNPDEAVALGAAIQGGI 426 (676)
Q Consensus 355 ~~~v~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~fg~~~~~~~~p~~aVa~GAal~a~~ 426 (676)
..++++..+.+-..+ ...+ ..+...|+|.||.+.. +.+.|++.+..+......+..+.+.||++++..
T Consensus 211 ~~i~~~~~~~La~~i-~~~~-~~~p~~vvlgGGv~~~--l~~~l~~~l~~~~~~i~~~~~a~~~GAa~la~~ 278 (291)
T 1zxo_A 211 RQLVMNSFIAFFRRN-VMQY-DYKQYPVHFIGSIAYC--YKEILQDAARQTGIQIGKILQSPMEGLIQYHSQ 278 (291)
T ss_dssp THHHHHHHHHHHTTT-GGGS-CTTTSCEEECSHHHHH--THHHHHHHTTTTTCCEEEECSCTHHHHHTTSSS
T ss_pred HHHHHHHHHHHHHHH-hccc-CCCCceEEEECcHHHH--HHHHHHHHHhcCCcEEeecCCCHHHHHHHHHHH
Confidence 344444444444444 2222 1156789999998766 666677766542222234557888999987653
No 134
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=33.40 E-value=71 Score=33.76 Aligned_cols=40 Identities=20% Similarity=0.386 Sum_probs=25.9
Q ss_pred eEEeeChhHHHHHh-----ccccC----CCCeEEEEeeCCceeEEEEEE
Q 005807 216 VQRIINEPTAAALS-----YGMNN----KEGLIAVFDLGGGTFDVSVLE 255 (676)
Q Consensus 216 ~~~li~Ep~AAal~-----y~~~~----~~~~vlV~D~GgGT~Dvsv~~ 255 (676)
.+++|+-.+=+.++ |.+.. ..+.+.++|+|||++.++...
T Consensus 151 ~v~iisG~eEg~y~wi~vnyllg~l~~~~~~t~g~lDlGGgStQi~f~~ 199 (452)
T 3zx3_A 151 GAKIITGQEEGAYGWITINYLLGRFKTPGGSTFGALDLGGASTQITFVP 199 (452)
T ss_dssp EEEECCHHHHHHHHHHHHHHHTTTTC---CCCCEEEEECSSEEEEEECC
T ss_pred ceEECCchhhhhhhHHHHHhhhccccCCCCCceEEEecCCCceEEEecc
Confidence 46777765544443 33222 124788999999999998753
No 135
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=33.28 E-value=2.3e+02 Score=33.63 Aligned_cols=13 Identities=8% Similarity=0.043 Sum_probs=7.8
Q ss_pred CCceEEEEcCCce
Q 005807 52 GNDVIGVDLGTTN 64 (676)
Q Consensus 52 ~~~vvGID~GTt~ 64 (676)
....+=|.|+.+.
T Consensus 220 FGK~i~i~F~~~g 232 (1080)
T 2dfs_A 220 FGKYIEIGFDKRY 232 (1080)
T ss_dssp SEEEEEEEECTTC
T ss_pred cceeEEEEECCCC
Confidence 3446777776654
No 136
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=33.26 E-value=1.2e+02 Score=32.27 Aligned_cols=22 Identities=23% Similarity=0.487 Sum_probs=20.5
Q ss_pred eEEEEeeCCceeEEEEEEEeCC
Q 005807 238 LIAVFDLGGGTFDVSVLEISNG 259 (676)
Q Consensus 238 ~vlV~D~GgGT~Dvsv~~~~~~ 259 (676)
.+|.+|+||.++-+.++++.+.
T Consensus 81 ~~LalDlGGTn~Rv~~V~l~g~ 102 (485)
T 3o8m_A 81 DFLALDLGGTNLRVVLVKLGGN 102 (485)
T ss_dssp EEEEEEESSSEEEEEEEEEESS
T ss_pred EEEEEEecCCeEEEEEEEECCC
Confidence 8999999999999999999765
No 137
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=32.48 E-value=80 Score=31.34 Aligned_cols=48 Identities=25% Similarity=0.298 Sum_probs=31.9
Q ss_pred CCcEEEEEcCCcCc-----HHHHHHHHHHhCCC-------CCCCCCcchhHhhHHHHHhh
Q 005807 378 DVDEVLLVGGMTRV-----PKVQEIVTEIFGKS-------PSKGVNPDEAVALGAAIQGG 425 (676)
Q Consensus 378 ~i~~ViLvGG~s~~-----p~i~~~l~~~fg~~-------~~~~~~p~~aVa~GAal~a~ 425 (676)
+.+.|+|-||.+.. +.+++.+++.+... +....-.+.+.++|||.++.
T Consensus 239 dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~ 298 (310)
T 3htv_A 239 DPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAH 298 (310)
T ss_dssp CCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHH
T ss_pred CCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 45889999998875 45777777665311 11122346789999998775
No 138
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=31.81 E-value=39 Score=34.89 Aligned_cols=21 Identities=14% Similarity=0.431 Sum_probs=18.7
Q ss_pred CceEEEEcCCceEEEEEEECC
Q 005807 53 NDVIGVDLGTTNSCVAVMEGK 73 (676)
Q Consensus 53 ~~vvGID~GTt~s~va~~~~~ 73 (676)
+.++|||+|.|++++++++.+
T Consensus 2 ~~vlgidiGgt~ik~al~d~~ 22 (381)
T 1saz_A 2 FRILTINPGSTSTKLSIFEDE 22 (381)
T ss_dssp CEEEEEEECSSEEEEEEEETT
T ss_pred CeEEEEECCccceeEEEEecc
Confidence 469999999999999998864
No 139
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=31.73 E-value=41 Score=32.56 Aligned_cols=41 Identities=27% Similarity=0.409 Sum_probs=27.8
Q ss_pred cCCCeEEeeChhHHHHHhc---cccCCCC-eEEEEeeCCceeEEEEE
Q 005807 212 AGLDVQRIINEPTAAALSY---GMNNKEG-LIAVFDLGGGTFDVSVL 254 (676)
Q Consensus 212 AGl~~~~li~Ep~AAal~y---~~~~~~~-~vlV~D~GgGT~Dvsv~ 254 (676)
.|++ +.+.|+..|||++. +..+..+ .++++-+|-| +-..++
T Consensus 114 ~~~p-V~v~NDanaaalaE~~~g~~~~~~~~~~~l~~GtG-IG~giv 158 (267)
T 1woq_A 114 LGRP-VEVINDADAAGLAEARYGAGAGVKGTVLVITLGTG-IGSAFI 158 (267)
T ss_dssp HTSC-EEEEEHHHHHHHHHHHHSTTTTCCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEeehhHHHHHHHHHhCCCCCCCCcEEEEEECcc-eEEEEE
Confidence 4776 68999999999974 3333323 5777788877 555553
No 140
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=31.37 E-value=52 Score=32.75 Aligned_cols=49 Identities=12% Similarity=0.181 Sum_probs=39.1
Q ss_pred HhHHHHHHHHHHHHHHHHcCCCcCCCcEEEEEcCCcCcHHHHHHHHHHhCCC
Q 005807 354 VNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIFGKS 405 (676)
Q Consensus 354 ~~~~v~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~fg~~ 405 (676)
++-.++.+.+.++++|+++++++++|+.|+.-|++.++ -+.+.+.||.+
T Consensus 215 ~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg~~ 263 (322)
T 1ub7_A 215 FKFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRI---IDAARERLGLP 263 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCCC
Confidence 34456677788999999999999999999999987654 45688888754
No 141
>3mxz_A Tubulin-specific chaperone A; helix bundle; 1.60A {Arabidopsis thaliana}
Probab=30.92 E-value=2.3e+02 Score=23.60 Aligned_cols=80 Identities=20% Similarity=0.222 Sum_probs=43.7
Q ss_pred HHHHHHHHHHhhHhHHHHHHHHHHHHH---HHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHhhccC---C---hH
Q 005807 557 IEKMVKEAELHAQRDQERKTLIDIRNN---ADTTIYSIEKSLGEYREKIPGEVAKEIEDAVSDLRKAMAGE---D---ID 627 (676)
Q Consensus 557 i~~~~~~~~~~~~~d~~~~~~~~~~n~---le~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wl~~~---~---~~ 627 (676)
+.+++++..-|.++-....++.+.... -+.-|-.-+..|.+... +-++-+.+|..++.+++++|... + .+
T Consensus 17 vkRL~KE~~~Y~kE~~~q~~kiekmk~e~~dey~iKkq~evL~Et~~-mipd~~~RL~~a~~~L~~~l~~~~~~~~~~~e 95 (116)
T 3mxz_A 17 CKRIVKELHSYEKEVEREAAKTADMKDKGADPYDLKQQENVLGESRM-MIPDCHKRLESALADLKSTLAELEETDEKEGP 95 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHTC-CCCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHhcccCCCChH
Confidence 566777777776655444444333221 12333333444444332 33566678999999999998731 2 55
Q ss_pred HHHHHHHHHH
Q 005807 628 GIKAKLDAAN 637 (676)
Q Consensus 628 ~~~~~~~~L~ 637 (676)
++....+.|.
T Consensus 96 e~~~Ak~~l~ 105 (116)
T 3mxz_A 96 EIEDAKKTVA 105 (116)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5555444443
No 142
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=30.81 E-value=36 Score=33.85 Aligned_cols=41 Identities=15% Similarity=0.134 Sum_probs=27.3
Q ss_pred cCCCeEEeeChhHHHHHhccc---cCCCCeEEEEeeCCceeEEEEE
Q 005807 212 AGLDVQRIINEPTAAALSYGM---NNKEGLIAVFDLGGGTFDVSVL 254 (676)
Q Consensus 212 AGl~~~~li~Ep~AAal~y~~---~~~~~~vlV~D~GgGT~Dvsv~ 254 (676)
.|++ +.+.|+..|||++-.. .+..++++++-+|-| +-..++
T Consensus 97 ~~~p-V~v~NDanaaalaE~~~G~~~~~~~~~~l~~GtG-iG~gii 140 (302)
T 3epq_A 97 MXIP-VGFSTDVNAAALGEFLFGEAXGLDSCLYITIGTG-IGAGAI 140 (302)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEE
Confidence 4776 6899999999986432 233347888888876 344443
No 143
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=30.44 E-value=1e+02 Score=30.35 Aligned_cols=21 Identities=24% Similarity=0.200 Sum_probs=18.3
Q ss_pred CceEEEEcCCceEEEEEEECC
Q 005807 53 NDVIGVDLGTTNSCVAVMEGK 73 (676)
Q Consensus 53 ~~vvGID~GTt~s~va~~~~~ 73 (676)
++++|||+|.|++.+++++..
T Consensus 3 ~~~lgiDiGgt~i~~~l~d~~ 23 (302)
T 3epq_A 3 AMLGGIEAGGTXFVCAVGRED 23 (302)
T ss_dssp CCEEEEEECSSEEEEEEECTT
T ss_pred cEEEEEEECcceeEEEEEECC
Confidence 579999999999999998653
No 144
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=30.42 E-value=57 Score=32.20 Aligned_cols=48 Identities=15% Similarity=0.270 Sum_probs=38.5
Q ss_pred hHHHHHHHHHHHHHHHHcCCCcCCCcEEEEEcCCcCcHHHHHHHHHHhCCC
Q 005807 355 NHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIFGKS 405 (676)
Q Consensus 355 ~~~v~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~fg~~ 405 (676)
+..++.+.+.++++|+++++++++|+.|++-|+++++ -+.+.+.||.+
T Consensus 206 ~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~~~~~~~lg~~ 253 (309)
T 2ebd_A 206 KVAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRI---INALAEKLNIP 253 (309)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhCCC
Confidence 3455677788999999999999999999999988654 35678888753
No 145
>1gs9_A Apolipoprotein E, APOE4; lipid transport, heparin-binding, plasma, lipid binding protein; 1.7A {Homo sapiens} SCOP: a.24.1.1 PDB: 1or3_A 1or2_A 1le4_A 1bz4_A 1lpe_A 1le2_A
Probab=30.13 E-value=2.4e+02 Score=25.08 Aligned_cols=54 Identities=19% Similarity=0.250 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHH
Q 005807 577 LIDIRNNADTTIYSIEKSLGEYREKIPGEVAKEIEDAVSDLRKAMAGEDIDGIKAKLDAANKAVSK 642 (676)
Q Consensus 577 ~~~~~n~le~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~L~~~~~~ 642 (676)
..+.|..++-++.+++..+. ...++-|+++...+.++.+- .....++|+..+.|
T Consensus 108 ~EelR~~l~p~~~el~~~l~----~~~EelR~kl~P~~eeL~~~--------~~~~~eeLr~kL~p 161 (165)
T 1gs9_A 108 MEDVRGRLVQYRGEVQAMLG----QSTEELRVRLASHLRKLRKR--------LLRDADDLQKRLAV 161 (165)
T ss_dssp HHHHHHHHHHHHHHHHTSTT----CCCHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHH--------HHhhHHHHHHHhhh
Confidence 33444444444444443332 23466777777777766433 33344455555444
No 146
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=29.73 E-value=23 Score=34.96 Aligned_cols=59 Identities=12% Similarity=-0.029 Sum_probs=32.5
Q ss_pred CCeEEEEeCCCCCHHHHHHHHHHHH-HcCC-CeEEeeChhHHHHHhccccCCCCeEEEEeeCCce
Q 005807 186 VSEAVITVPAYFNDAQRQATKDAGR-IAGL-DVQRIINEPTAAALSYGMNNKEGLIAVFDLGGGT 248 (676)
Q Consensus 186 ~~~~VITVPa~~~~~qr~~l~~Aa~-~AGl-~~~~li~Ep~AAal~y~~~~~~~~vlV~D~GgGT 248 (676)
+..+.|++|..- ......+++..+ ..++ ..+.+.|+-.||+++-. .....+++=+|-|.
T Consensus 58 i~~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aalge~---g~~~~v~v~~GTGi 118 (291)
T 1zxo_A 58 FNAVYFYGAGCT-PEKAPVLRRAIADSLPVIGNIKANSDMLAAAHGLC---GQKAGIACILGTGS 118 (291)
T ss_dssp ---CEEECTTCC-TTTTHHHHHHHHHHSCCCSCCEEECSHHHHHHHTT---TTSCBEEEEESSSE
T ss_pred ccEEEEEcCCCC-HHHHHHHHHHHHHhcCCCceEEEECcHHHHHHhhc---CCCCcEEEEeCCCh
Confidence 345778888753 211123433333 3454 35789999999998542 12234444477776
No 147
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=28.96 E-value=1.1e+02 Score=31.17 Aligned_cols=47 Identities=15% Similarity=0.188 Sum_probs=30.4
Q ss_pred CcEEEEEcCCcCc-HHHHHHHHHHhCC------C--CCCCCCcchhHhhHHHHHhh
Q 005807 379 VDEVLLVGGMTRV-PKVQEIVTEIFGK------S--PSKGVNPDEAVALGAAIQGG 425 (676)
Q Consensus 379 i~~ViLvGG~s~~-p~i~~~l~~~fg~------~--~~~~~~p~~aVa~GAal~a~ 425 (676)
++.|+|.||.+.. +.+.+.+++.+.. . +......+.+.+.|||.++.
T Consensus 315 P~~IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~~~a~~~GAa~l~~ 370 (380)
T 2hoe_A 315 ISKIVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQEPVIAFGAAVHAL 370 (380)
T ss_dssp CCEEEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCSCHHHHHHHHHHH
T ss_pred CCEEEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 4689999998864 6776776665521 1 11122345689999998764
No 148
>3fcg_A F1 capsule-anchoring protein; beta barrel, beta strand swapping, cell membrane, cell outer membrane, cell projection, fimbrium, membrane; 2.85A {Yersinia pestis}
Probab=28.84 E-value=1.3e+02 Score=23.99 Aligned_cols=56 Identities=25% Similarity=0.389 Sum_probs=34.1
Q ss_pred ceeEEEEeecCccccccccceeEEEEcCCCCCCCCCCeeEEEEEEcCCccEEEEEEecCCCceeeEEecc
Q 005807 479 TQVGIKVLQGEREMAADNKALGEFELMGIPPAPRGIPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRS 548 (676)
Q Consensus 479 ~~~~i~i~~ge~~~~~~~~~lg~~~l~~~~~~~~g~~~i~v~f~~d~~g~l~v~~~~~~t~~~~~~~i~~ 548 (676)
+.-.+.|+|.....-...-.-|.|.|.++++.. ..|.|.|+++|. .|+.+.+++..
T Consensus 25 s~A~V~v~qnG~~iy~~~VppGpF~I~dl~~~~-------------~~Gdl~V~v~ea-dG~~~~~~vp~ 80 (90)
T 3fcg_A 25 TQARVEVLRDGYTVSNELVPSGPFELANLPLGG-------------GSGELKVIIHES-DGTKQVFTVPY 80 (90)
T ss_dssp SSEEEEEESSSCEEEEEEECSEEEEECCCC----------------CCEEEEEEEECT-TSCEEEEEEEE
T ss_pred CCcEEEEEECCEEEEEeEeCCCCeEEcCCcccC-------------CceeEEEEEEEC-CCCEEEEEECc
Confidence 345677777665554455566899998887632 245677777663 46666666544
No 149
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=28.51 E-value=35 Score=33.49 Aligned_cols=48 Identities=15% Similarity=0.064 Sum_probs=31.3
Q ss_pred CcEEEEEcCCcCcHHHHHHHHHHhC------------CCCCCCCCcchhHhhHHHHHhhh
Q 005807 379 VDEVLLVGGMTRVPKVQEIVTEIFG------------KSPSKGVNPDEAVALGAAIQGGI 426 (676)
Q Consensus 379 i~~ViLvGG~s~~p~i~~~l~~~fg------------~~~~~~~~p~~aVa~GAal~a~~ 426 (676)
.+.|+|.||.+..+.+.+.+++.+. .++......+.+.+.||+.++..
T Consensus 228 p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~~ 287 (292)
T 2gup_A 228 PGVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWLQ 287 (292)
T ss_dssp CSEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHHH
T ss_pred CCEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHHHH
Confidence 4789999998877777666665541 11112234466899999987653
No 150
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A
Probab=28.24 E-value=3.6e+02 Score=25.47 Aligned_cols=46 Identities=15% Similarity=-0.005 Sum_probs=36.7
Q ss_pred CCCCHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 005807 550 GGLSESEIEKMVKEAELHAQRDQERKTLIDIRNNADTTIYSIEKSLGE 597 (676)
Q Consensus 550 ~~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~le~~i~~~~~~l~~ 597 (676)
.+-|-.+++.+..+...|+..++ ..+..-|+.++..+..++.+|..
T Consensus 39 f~~sl~~vq~~l~~f~~fr~~ek--ppk~~EK~~Le~ll~~lqtklr~ 84 (235)
T 2odv_A 39 FPSSFEEIEILWSQFLKFKEMEL--PAKEADKNRSKGIYQSLEGAVQA 84 (235)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHTH--HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHHhccC--CHHHHHHHHHHHHHHHHHHHHHc
Confidence 34566788888888888887654 66778899999999999999974
No 151
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=27.90 E-value=1.1e+02 Score=30.04 Aligned_cols=49 Identities=20% Similarity=0.251 Sum_probs=38.7
Q ss_pred HhHHHHHHHHHHHHHHHHcCCCcCCCcEEEEEcCCcCcHHHHHHHHHHhCCC
Q 005807 354 VNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIFGKS 405 (676)
Q Consensus 354 ~~~~v~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~fg~~ 405 (676)
.+.....+...++++|+++++++++|+.|++-++++++ -+.+.+.||.+
T Consensus 207 ~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg~~ 255 (313)
T 1zow_A 207 FKFAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIRI---MESARERLGIS 255 (313)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHH---HHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhCCC
Confidence 34456677888999999999999999999999887643 35577788753
No 152
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=27.71 E-value=1e+02 Score=30.79 Aligned_cols=49 Identities=12% Similarity=0.243 Sum_probs=38.7
Q ss_pred HhHHHHHHHHHHHHHHHHcCCCcCCCcEEEEEcCCcCcHHHHHHHHHHhCCC
Q 005807 354 VNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIFGKS 405 (676)
Q Consensus 354 ~~~~v~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~fg~~ 405 (676)
++-..+.+.+.++++|+++++++++|+.|+.-|++.++ -+.+.+.||.+
T Consensus 226 ~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg~~ 274 (339)
T 1mzj_A 226 FRWAVADVVPAAREALEVAGLTVGDLVAFVPHQANLRI---IDVLVDRLGVP 274 (339)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCGGGCSEEEECCSCHHH---HHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHhCCC
Confidence 33456677788999999999999999999999887653 45678888754
No 153
>1nfn_A Apolipoprotein E3; lipid transport, heparin-binding, plasma protein, HDL, VLDL; 1.80A {Homo sapiens} SCOP: a.24.1.1 PDB: 1h7i_A 1ea8_A 1b68_A 1nfo_A 2kc3_A 1ya9_A
Probab=27.09 E-value=90 Score=28.68 Aligned_cols=23 Identities=13% Similarity=0.095 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Q 005807 574 RKTLIDIRNNADTTIYSIEKSLG 596 (676)
Q Consensus 574 ~~~~~~~~n~le~~i~~~~~~l~ 596 (676)
..+..+.+..|+-|..+++..+.
T Consensus 105 ~kdlEelr~kL~P~~eEL~~~l~ 127 (191)
T 1nfn_A 105 GADMEDVCGRLVQYRGEVQAMLG 127 (191)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhhHHHHHHHHHHH
Confidence 44555666666666666666664
No 154
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=27.01 E-value=3.5e+02 Score=24.33 Aligned_cols=65 Identities=9% Similarity=0.075 Sum_probs=34.5
Q ss_pred CCCCHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHhhc
Q 005807 550 GGLSESEIEKMVKEAELHAQRDQERKTLIDIRNNADTTIYSIEKSLGEYREKIPGEVAKEIEDAVSDLRKAMA 622 (676)
Q Consensus 550 ~~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~le~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wl~ 622 (676)
..||+|+.+++.+-.+++..+-.. .+.++...-.+++..+. .+..+++..+++.+.+.+++..+.
T Consensus 66 LnLT~EQq~ql~~I~~e~r~~~~~------Lr~ql~akr~EL~aL~~--a~~~DeakI~aL~~Ei~~Lr~qL~ 130 (175)
T 3lay_A 66 SPLTTEQQATAQKIYDDYYTQTSA------LRQQLISKRYEYNALLT--ASSPDTAKINAVAKEMESLGQKLD 130 (175)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHT--SSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 469999988887666665544222 22222222233333332 245566666666666666665554
No 155
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=26.53 E-value=1.1e+02 Score=30.44 Aligned_cols=49 Identities=10% Similarity=0.184 Sum_probs=38.6
Q ss_pred HhHHHHHHHHHHHHHHHHcCCCcCCCcEEEEEcCCcCcHHHHHHHHHHhCCC
Q 005807 354 VNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIFGKS 405 (676)
Q Consensus 354 ~~~~v~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~fg~~ 405 (676)
++-..+.+.+.++++|+++++++++|+.|++-+++.++ -+.+.+.||.+
T Consensus 219 ~~~~~~~~~~~i~~aL~~agl~~~did~~~~H~~~~~~---~d~~~~~lg~~ 267 (331)
T 2x3e_A 219 FGQAVTQMSDSVRRVLDRVGWQASDLHHLVPHQANTRI---LAAVADQLDLP 267 (331)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHHH---HHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCCC
Confidence 33455677788999999999999999999999888654 45677888754
No 156
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=26.40 E-value=44 Score=33.32 Aligned_cols=21 Identities=33% Similarity=0.480 Sum_probs=18.4
Q ss_pred CceEEEEcCCceEEEEEEECC
Q 005807 53 NDVIGVDLGTTNSCVAVMEGK 73 (676)
Q Consensus 53 ~~vvGID~GTt~s~va~~~~~ 73 (676)
.+++|||+|.|++.+++++..
T Consensus 7 ~~~lgiDiGgt~i~~~l~d~~ 27 (310)
T 3htv_A 7 NVVAGVDMGATHIRFCLRTAE 27 (310)
T ss_dssp EEEEEEEECSSEEEEEEEETT
T ss_pred CEEEEEEeCCCEEEEEEECCC
Confidence 579999999999999998753
No 157
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=26.21 E-value=48 Score=33.44 Aligned_cols=41 Identities=17% Similarity=0.127 Sum_probs=27.7
Q ss_pred cCCCeEEeeChhHHHHHhccc---cCCCCeEEEEeeCCceeEEEEE
Q 005807 212 AGLDVQRIINEPTAAALSYGM---NNKEGLIAVFDLGGGTFDVSVL 254 (676)
Q Consensus 212 AGl~~~~li~Ep~AAal~y~~---~~~~~~vlV~D~GgGT~Dvsv~ 254 (676)
.|++ +.+.|+..|||++-.. .+..++++++-+|-| +-..++
T Consensus 131 ~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~v~i~~GtG-iG~gii 174 (343)
T 2yhw_A 131 LHLP-VWVDNDGNCAALAERKFGQGKGLENFVTLITGTG-IGGGII 174 (343)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHTSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCC-EEEEEE
Confidence 4776 6899999999987432 222347788888887 444443
No 158
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=25.86 E-value=1.1e+02 Score=31.76 Aligned_cols=65 Identities=22% Similarity=0.310 Sum_probs=47.4
Q ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHHcCCCeEEeeChhHH-HHHhccccCCC---------C------eEEE--------
Q 005807 186 VSEAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTA-AALSYGMNNKE---------G------LIAV-------- 241 (676)
Q Consensus 186 ~~~~VITVPa~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~A-Aal~y~~~~~~---------~------~vlV-------- 241 (676)
+.++|++.|..-+ -.+.-||.++|.+.+.-+-=..| ||++||.+.-. + .-+|
T Consensus 154 V~~Iv~~tPp~i~----p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~~~G~Vg 229 (434)
T 1kae_A 154 CKKVVLCSPPPIA----DEILYAAQLCGVQDVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLDGAA 229 (434)
T ss_dssp CSEEEEEECSSCC----HHHHHHHHHTTCCEEEECCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHHCTTSCE
T ss_pred CCeEEEECCCCCC----HHHHHHHHHcCCCEEeecccHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHhhcCccc
Confidence 5689999998222 45889999999999999998888 56899976311 1 1133
Q ss_pred EeeCCceeEEEEE
Q 005807 242 FDLGGGTFDVSVL 254 (676)
Q Consensus 242 ~D~GgGT~Dvsv~ 254 (676)
+|+=+|-+.+.|+
T Consensus 230 IDm~AGPSEilVi 242 (434)
T 1kae_A 230 IDMPAGPSEVLVI 242 (434)
T ss_dssp ESCCCCCCEEEEE
T ss_pred cCCCCCCceEEEE
Confidence 7787888877774
No 159
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=25.37 E-value=50 Score=26.09 Aligned_cols=28 Identities=18% Similarity=0.262 Sum_probs=25.7
Q ss_pred EEEEeCCCCCHHHHHHHHHHHHHcCCCe
Q 005807 189 AVITVPAYFNDAQRQATKDAGRIAGLDV 216 (676)
Q Consensus 189 ~VITVPa~~~~~qr~~l~~Aa~~AGl~~ 216 (676)
-.++.|+.++..+|..+.+.|+..||.-
T Consensus 34 ~~l~FP~sLs~~eR~~IH~lA~~~GL~h 61 (86)
T 1msz_A 34 MQLEFPPSLNSHDRLRVHQIAEEHGLRH 61 (86)
T ss_dssp SEEEECTTCCSHHHHHHHHHHHHTTEEE
T ss_pred cEEEcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 4799999999999999999999999954
No 160
>3t69_A Putative 2-dehydro-3-deoxygalactonokinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.55A {Sinorhizobium meliloti}
Probab=24.55 E-value=50 Score=33.28 Aligned_cols=47 Identities=26% Similarity=0.272 Sum_probs=35.6
Q ss_pred cEEEEEcCCcCcHHHHHHHHHHhCCCCCCCCCcchhHhhHHHHHhhhcc
Q 005807 380 DEVLLVGGMTRVPKVQEIVTEIFGKSPSKGVNPDEAVALGAAIQGGILR 428 (676)
Q Consensus 380 ~~ViLvGG~s~~p~i~~~l~~~fg~~~~~~~~p~~aVa~GAal~a~~l~ 428 (676)
..|.|+|........+..|+. +|.+ ....+++.++..|....+..+.
T Consensus 260 ~~V~LiG~~~L~~~Y~~AL~~-~G~~-~~~~d~d~a~~~GL~~~a~~~~ 306 (330)
T 3t69_A 260 DGVCLVGSGGLGTLYRTALES-QGLN-VRAVDADEAVRAGLSAAARAIW 306 (330)
T ss_dssp CEEEEEECHHHHHHHHHHHHH-TTCE-EEEEEHHHHHHHHHHHHHHHHS
T ss_pred CeEEEEeCHHHHHHHHHHHHH-cCCC-ceeeCHHHHHHHHHHHHHHHHH
Confidence 579999999888888888865 6763 3456799999999876555443
No 161
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=24.54 E-value=32 Score=38.01 Aligned_cols=48 Identities=23% Similarity=0.344 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHHHcCCCc--CCCcEEEEEcCCcCcHHHHHHHHHHhC
Q 005807 356 HLIERTKAPCKNCLKDANITI--KDVDEVLLVGGMTRVPKVQEIVTEIFG 403 (676)
Q Consensus 356 ~~v~~i~~~i~~~l~~~~~~~--~~i~~ViLvGG~s~~p~i~~~l~~~fg 403 (676)
|+=+.|++-|..+......++ .=.+.|++|||++.+|.+.-.|.+.+.
T Consensus 476 pLdkAIi~SIt~a~~~~d~~k~~~~y~nilivGggski~g~~~~L~dri~ 525 (655)
T 4am6_A 476 PLEKAIVQSIANASITADVTRMNSFYSNILIVGGSSKIPALDFILTDRIN 525 (655)
T ss_dssp CHHHHHHHHHHHHHHTSCGGGHHHHHTCEEEESTTCCCTTHHHHHHHHHH
T ss_pred cHHHHHHHHHHhhhccccHHHHHHHhhcEEEEcCcccCccHHHHHHHHHH
Confidence 444445555554333222211 114789999999999999999999885
No 162
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=24.00 E-value=1.5e+02 Score=29.64 Aligned_cols=21 Identities=43% Similarity=0.491 Sum_probs=18.5
Q ss_pred CceEEEEcCCceEEEEEEECC
Q 005807 53 NDVIGVDLGTTNSCVAVMEGK 73 (676)
Q Consensus 53 ~~vvGID~GTt~s~va~~~~~ 73 (676)
.+++|||+|+|++.+++++..
T Consensus 30 ~~~lgiDiGgt~i~~~l~d~~ 50 (343)
T 2yhw_A 30 LSALAVDLGGTNLRVAIVSMK 50 (343)
T ss_dssp EEEEEEEECSSEEEEEEEETT
T ss_pred cEEEEEEECCCEEEEEEECCC
Confidence 579999999999999998753
No 163
>1qsd_A Protein (beta-tubulin binding post-chaperonin cofactor); four-helix-bundle, chaperone; 2.20A {Saccharomyces cerevisiae} SCOP: a.7.5.1
Probab=23.90 E-value=2.3e+02 Score=23.24 Aligned_cols=80 Identities=11% Similarity=0.206 Sum_probs=43.8
Q ss_pred HHHHHHHHHHhhHhHHHHHHHHHH-HHH---HHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHhhccCC-hHHHHH
Q 005807 557 IEKMVKEAELHAQRDQERKTLIDI-RNN---ADTTIYSIEKSLGEYREKIPGEVAKEIEDAVSDLRKAMAGED-IDGIKA 631 (676)
Q Consensus 557 i~~~~~~~~~~~~~d~~~~~~~~~-~n~---le~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~-~~~~~~ 631 (676)
+.++.++..-|.++-....++.+. +.+ -+.-|-.-+..|.+... +-++-+.+|..++.+++++|.+.. .+++..
T Consensus 13 vkRL~KE~~~Y~kE~~~q~~riek~k~~~~~dey~iKkq~evl~Et~~-mipd~~~Rl~~a~~~L~~~l~~~~~~ee~~~ 91 (106)
T 1qsd_A 13 LKRLTKEEGYYQQELKDQEAHVAKLKEDKSVDPYDLKKQEEVLDDTKR-LLPTLYEKIREFKEDLEQFLKTYQGTEDVSD 91 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTCCSSSCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHhccCcHHHHH
Confidence 466777777776655444444333 222 13333344444444333 335566789999999999985432 445444
Q ss_pred HHHHHH
Q 005807 632 KLDAAN 637 (676)
Q Consensus 632 ~~~~L~ 637 (676)
..+.|.
T Consensus 92 Ake~l~ 97 (106)
T 1qsd_A 92 ARSAIT 97 (106)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444443
No 164
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=23.74 E-value=1.5e+02 Score=31.35 Aligned_cols=51 Identities=22% Similarity=0.399 Sum_probs=32.6
Q ss_pred CeEEEEeeCCceeEEEEEEEeCC-----eEEEEEecCCCC----cchHHHHHHHHHHHHHHhh
Q 005807 237 GLIAVFDLGGGTFDVSVLEISNG-----VFEVKATNGDTF----LGGEDFDNALLEFLVSEFK 290 (676)
Q Consensus 237 ~~vlV~D~GgGT~Dvsv~~~~~~-----~~~v~~~~g~~~----lGG~~~D~~l~~~l~~~~~ 290 (676)
+.+|.+|+||.+|=|..+++.++ .++........+ .| . ...|++|+.+.+.
T Consensus 77 G~fLAlDlGGTNfRV~~V~L~g~~~~~~~~~~~~~~~~Ip~~l~~g-t--~~eLFd~IA~~i~ 136 (470)
T 3f9m_A 77 GDFLSLDLGGTNFRVMLVKVGEGEEGQWSVKTKHQMYSIPEDAMTG-T--AEMLFDYISECIS 136 (470)
T ss_dssp EEEEEEEESSSEEEEEEEEEEC----CEEEEEEEEEEECCHHHHSS-B--HHHHHHHHHHHHH
T ss_pred eEEEEEEecCceEEEEEEEECCCCCCcceEEEEEEeecCChHhccC-C--HHHHHHHHHHHHH
Confidence 38999999999999999999764 355443322111 11 1 3567777766543
No 165
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=23.74 E-value=2.5e+02 Score=29.60 Aligned_cols=23 Identities=17% Similarity=0.456 Sum_probs=21.0
Q ss_pred eEEEEeeCCceeEEEEEEEeCCe
Q 005807 238 LIAVFDLGGGTFDVSVLEISNGV 260 (676)
Q Consensus 238 ~vlV~D~GgGT~Dvsv~~~~~~~ 260 (676)
.++.+|+||.++-+.++...+..
T Consensus 62 ~~laiDlGGTnirv~lV~~~G~~ 84 (457)
T 2yhx_A 62 SFLAIVMGGGDLEVILISLAGRQ 84 (457)
T ss_dssp EEEEEEECSSEEEEEEEEEETTE
T ss_pred eEEEEEeCCCeEEEEEEEeCCCe
Confidence 89999999999999999987665
No 166
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=23.39 E-value=56 Score=31.94 Aligned_cols=19 Identities=21% Similarity=0.270 Sum_probs=17.4
Q ss_pred CceEEEEcCCceEEEEEEE
Q 005807 53 NDVIGVDLGTTNSCVAVME 71 (676)
Q Consensus 53 ~~vvGID~GTt~s~va~~~ 71 (676)
.+.+.||.|+|+++.++++
T Consensus 23 ~M~L~IDiGNT~ik~g~~~ 41 (271)
T 2f9w_A 23 SMILELDCGNSLIKWRVIE 41 (271)
T ss_dssp CEEEEEEECSSCEEEEEEE
T ss_pred CcEEEEEeCCCeeEEEEEe
Confidence 3589999999999999988
No 167
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=23.06 E-value=61 Score=33.65 Aligned_cols=46 Identities=9% Similarity=0.109 Sum_probs=35.4
Q ss_pred HHhHHHHHHHHHHHHHHHHcCCCcCCCcEEEEEcCCc-CcHHHHHHHHHHh
Q 005807 353 LVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMT-RVPKVQEIVTEIF 402 (676)
Q Consensus 353 ~~~~~v~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~~p~i~~~l~~~f 402 (676)
.++-++.++.+.|-...... ..+|.|+++||-+ +++.+|+.+.+.+
T Consensus 301 A~d~f~yri~k~IGa~~a~L----ggvDaiVFTgGIGEns~~vR~~i~~~l 347 (408)
T 1g99_A 301 ALEIFAYKVKKFIGEYSAVL----NGADAVVFTAGIGENSASIRKRILTGL 347 (408)
T ss_dssp HHHHHHHHHHHHHHHHHHHT----TSCSEEEEEHHHHHHCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHhh----CCCCEEEECccccccCHHHHHHHHhhh
Confidence 44556666666666665554 3589999999999 9999999999766
No 168
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=22.90 E-value=52 Score=33.17 Aligned_cols=39 Identities=13% Similarity=0.272 Sum_probs=16.1
Q ss_pred ceEEEEcCCceEEEEEEE-CCc--eEE--EeCCCCCcccceEEE
Q 005807 54 DVIGVDLGTTNSCVAVME-GKN--PKV--IENSEGTRTTPSVVA 92 (676)
Q Consensus 54 ~vvGID~GTt~s~va~~~-~~~--~~v--i~~~~g~~~~PS~v~ 92 (676)
+++|+|+|..|++++... +|. ... .+-|.|....+..+.
T Consensus 1 ~iiG~DIGGAn~K~a~~~~~g~~~~~~~~~PlW~~~~~L~~~l~ 44 (334)
T 3cet_A 1 MILGIDIGGANTKITELHENGEFKVHHLYFPMWKNNDKLAEVLK 44 (334)
T ss_dssp CEEEEEEC--CEEEEEECSTTCCEEEEC----------------
T ss_pred CeeEEEecccceeeeeecCCCceEEEEEecCCcCCchHHHHHHH
Confidence 389999999999999876 343 222 245777555555543
No 169
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=22.45 E-value=5.4e+02 Score=27.02 Aligned_cols=18 Identities=17% Similarity=0.350 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 005807 627 DGIKAKLDAANKAVSKIG 644 (676)
Q Consensus 627 ~~~~~~~~~L~~~~~~i~ 644 (676)
+.++.++..|+..+....
T Consensus 178 ~~l~~ki~~l~~~~~~~~ 195 (464)
T 1m1j_B 178 DSLHKKIQKLENAIATQT 195 (464)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 345555555555554433
No 170
>1lj2_A NSP3-C, nonstructural RNA-binding protein 34, NS34, NCVP4; NSP3, homodimer, translation, mRNA, closed loop, coiled coil; 2.38A {Simian rotavirus A} SCOP: h.1.13.2
Probab=22.32 E-value=3.1e+02 Score=22.16 Aligned_cols=65 Identities=18% Similarity=0.272 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHhhcc-CChHHHHHHHHHHHHHHHHH
Q 005807 576 TLIDIRNNADTTIYSIEKSLGEYREKIPGEVAKEIEDAVSDLRKAMAG-EDIDGIKAKLDAANKAVSKI 643 (676)
Q Consensus 576 ~~~~~~n~le~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wl~~-~~~~~~~~~~~~L~~~~~~i 643 (676)
.-.+.+|...+++..++=.|++. .++++-|+.+...|+.+- -++. +..++++.-+..|-.-.+.+
T Consensus 25 lE~dlq~ki~slisSiEw~l~Sm--el~de~K~DieQqLnsid-~Inp~~aiddiE~~IrnlI~Dyd~~ 90 (110)
T 1lj2_A 25 LERDLQNKIGSLTSSIEWYLRSM--ELDPEIKADIEQQINSID-AINPLHAFDDLESVIRNLISDYDKL 90 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTS--CCCHHHHHHHHHHHTTSC-SSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhc--cCChHHHHHHHHHhcccc-ccCcchhHhHHHHHHHHHHHHHHHH
Confidence 34578899999999999888753 478888877766655431 0111 11555555555555444443
No 171
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=22.18 E-value=53 Score=33.64 Aligned_cols=21 Identities=14% Similarity=0.124 Sum_probs=18.3
Q ss_pred CCceEEEEcCCceEEEEEEEC
Q 005807 52 GNDVIGVDLGTTNSCVAVMEG 72 (676)
Q Consensus 52 ~~~vvGID~GTt~s~va~~~~ 72 (676)
+++++|||+|.|++.+++++.
T Consensus 28 ~~~~lgiDiGgt~i~~~l~d~ 48 (373)
T 2q2r_A 28 APLTFVGDVGGTSARMGFVRE 48 (373)
T ss_dssp SCEEEEEEECSSEEEEEEEEE
T ss_pred CCeEEEEEEccccEEEEEEec
Confidence 457999999999999999864
No 172
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=22.17 E-value=1.6e+02 Score=29.25 Aligned_cols=48 Identities=8% Similarity=0.124 Sum_probs=38.0
Q ss_pred hHHHHHHHHHHHHHHHHcCCCcCCCcEEEEEcCCcCcHHHHHHHHHHhCCC
Q 005807 355 NHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIFGKS 405 (676)
Q Consensus 355 ~~~v~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~fg~~ 405 (676)
......+...++++|+++++++++|+.+++-++++++ -+.+.+.||.+
T Consensus 228 ~~~~~~~~~~i~~al~~agl~~~dId~~~~H~~~~~~---~~~~~~~lg~~ 275 (335)
T 1u6e_A 228 RWAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRI---NELLVKNLQLR 275 (335)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCHHH---HHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHcCCC
Confidence 3446677888999999999999999999999988654 34577778753
No 173
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=22.03 E-value=73 Score=33.57 Aligned_cols=53 Identities=19% Similarity=0.172 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHcC---CCeEEeeChhHHHHHhccccCCCCeEEEEeeCCceeEEEEE
Q 005807 201 QRQATKDAGRIAG---LDVQRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSVL 254 (676)
Q Consensus 201 qr~~l~~Aa~~AG---l~~~~li~Ep~AAal~y~~~~~~~~vlV~D~GgGT~Dvsv~ 254 (676)
-.+.+++|...-| ++++.++|+.+|+.++...... +..+-+=+|-||=-+-+.
T Consensus 162 v~~lL~~al~r~~~~~v~vvAivNDTvgTLla~~y~~~-~~~iglIlGTGtNa~y~e 217 (445)
T 3hm8_A 162 VVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYEDP-RCEIGLIVGTGTNACYME 217 (445)
T ss_dssp HHHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTTCT-TEEEEEEESSSEEEEEEE
T ss_pred HHHHHHHHHHhcCCCCcceEEEecCcHHHHHhhccCCC-CceEEEEEeCCceEEEEE
Confidence 3556677776653 4678999999999998665433 344445567775444333
No 174
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=22.00 E-value=1.7e+02 Score=29.18 Aligned_cols=50 Identities=12% Similarity=0.195 Sum_probs=40.1
Q ss_pred HHhHHHHHHHHHHHHHHHHcCCCcCCCcEEEEEcCCcCcHHHHHHHHHHhCCC
Q 005807 353 LVNHLIERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIFGKS 405 (676)
Q Consensus 353 ~~~~~v~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~fg~~ 405 (676)
+++..++.+.+.++++|+++++++++|+.+++-.++.+ +-+.+.+.++.+
T Consensus 228 v~~~~~~~~~~~i~~~l~~~gl~~~did~~~~Hq~~~~---i~~~~~~~lgl~ 277 (333)
T 4dfe_A 228 VFKLAVNVLEKVAVEALEKANLSAEQIDWLIPHQANIR---IMQSTCRKLGLP 277 (333)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHH---HHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH---HHHHHHHHhCCC
Confidence 34556677788899999999999999999999888754 457778888754
No 175
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=21.64 E-value=80 Score=32.36 Aligned_cols=22 Identities=23% Similarity=0.309 Sum_probs=19.2
Q ss_pred CCCCceEEEEcCCceEEEEEEE
Q 005807 50 PAGNDVIGVDLGTTNSCVAVME 71 (676)
Q Consensus 50 ~~~~~vvGID~GTt~s~va~~~ 71 (676)
+...+++|||+|.|++.+++++
T Consensus 6 ~d~~~~lgiDIGgt~i~~~l~d 27 (366)
T 3mcp_A 6 NDNRIVMTLDAGGTNFVFSAIQ 27 (366)
T ss_dssp TCCCEEEEEECSSSEEEEEEEE
T ss_pred CCCCEEEEEEECcceEEEEEEE
Confidence 3456899999999999999987
No 176
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=21.53 E-value=5.5e+02 Score=24.76 Aligned_cols=19 Identities=5% Similarity=0.198 Sum_probs=8.2
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 005807 577 LIDIRNNADTTIYSIEKSL 595 (676)
Q Consensus 577 ~~~~~n~le~~i~~~~~~l 595 (676)
..+.+..|+-|..+++..+
T Consensus 46 le~lr~~L~Py~~el~~~~ 64 (273)
T 3s84_A 46 LRELQQRLEPYADQLRTQV 64 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444443
No 177
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=21.22 E-value=1.1e+02 Score=29.37 Aligned_cols=53 Identities=15% Similarity=0.246 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHcCCCcCCCcEEEEEcCCcCcHHHHHHHHHHhCCCCCCCCCcchhHhhHHH
Q 005807 359 ERTKAPCKNCLKDANITIKDVDEVLLVGGMTRVPKVQEIVTEIFGKSPSKGVNPDEAVALGAA 421 (676)
Q Consensus 359 ~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~fg~~~~~~~~p~~aVa~GAa 421 (676)
+.+.+.+.+.+++ ..++.|+| |++.+|.+.+.|++.+|. ..+||-.+++.=+.
T Consensus 160 ~~l~~~~~~~~~~-----~gad~IVL--GCTh~p~l~~~i~~~~gV---pvID~~~a~~~~~~ 212 (245)
T 3qvl_A 160 EKVRERCIRALKE-----DGSGAIVL--GSGGMATLAQQLTRELRV---PVIDGVSAAVKMVE 212 (245)
T ss_dssp HHHHHHHHHHHHH-----SCCSEEEE--CCGGGGGGHHHHHHHHTS---CEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----cCCCEEEE--CCCChHHHHHHHHHHcCC---eEEccHHHHHHHHH
Confidence 3444444445544 33577777 678899999999999983 34677776655443
No 178
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=20.99 E-value=79 Score=33.57 Aligned_cols=52 Identities=19% Similarity=0.188 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHcC---CCeEEeeChhHHHHHhccccCCCCeEEEEeeCCceeEEE
Q 005807 200 AQRQATKDAGRIAG---LDVQRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVS 252 (676)
Q Consensus 200 ~qr~~l~~Aa~~AG---l~~~~li~Ep~AAal~y~~~~~~~~vlV~D~GgGT~Dvs 252 (676)
.-.+.+++|.+.-| ++++.++|+.+|..++...... +..+=+=+|-||=-+-
T Consensus 185 DVv~lL~~al~r~g~~~v~v~AlvNDTVgTL~s~aY~~~-~~~iGlI~GTGtNa~Y 239 (470)
T 3f9m_A 185 NVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYEDH-QCEVGMIVGTGCNACY 239 (470)
T ss_dssp BHHHHHHHHHHHHCSCCCEEEEEECHHHHHHHHHHTTCT-TEEEEEEESSSEEEEE
T ss_pred cHHHHHHHHHHhcCCCCCcEEEEEEcCHHHHHhcccCCC-CceEEEEEecCCceEE
Confidence 34566777777776 3578899999999887765543 3344444677755333
No 179
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=20.11 E-value=49 Score=31.40 Aligned_cols=39 Identities=23% Similarity=0.387 Sum_probs=27.1
Q ss_pred HcCCCeEEeeChhHHHHHhccccCCCCeEEEEeeCCceeEEEEE
Q 005807 211 IAGLDVQRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSVL 254 (676)
Q Consensus 211 ~AGl~~~~li~Ep~AAal~y~~~~~~~~vlV~D~GgGT~Dvsv~ 254 (676)
..|++ +.+.|+..|+|++.... ++++++-+|-| +-..++
T Consensus 90 ~~~~p-v~v~NDanaaalge~~~---~~~~~l~~GtG-iG~gii 128 (226)
T 3lm2_A 90 AFGRP-VRIVNDALMQAIGSYNG---GRMLFLGLGTG-LGAAMI 128 (226)
T ss_dssp HHTSC-EEEEEHHHHHHHHHCCS---SEEEEEEESSS-EEEEEE
T ss_pred hcCCe-EEEEEHHHHHHHHHhhc---CcEEEEEeCCc-eEEEEE
Confidence 45776 57999999999875433 46777778776 445543
Done!