BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005812
(676 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224105333|ref|XP_002313773.1| predicted protein [Populus trichocarpa]
gi|222850181|gb|EEE87728.1| predicted protein [Populus trichocarpa]
Length = 974
Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/706 (65%), Positives = 540/706 (76%), Gaps = 51/706 (7%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
MVT+KGS EHRGFG+VQFA+ +DANRA+E+KNG+SVGGRKI VKHAMHRASLEQRR+K
Sbjct: 50 MVTQKGSTEHRGFGFVQFALKDDANRAIEIKNGSSVGGRKIAVKHAMHRASLEQRRAKAA 109
Query: 61 Q---EVQAEDIEKTMDNKDGVISGAEKHSSKLLESG------------KTVKPRKAATLG 105
Q +VQ +D KT+D K V S EKH +LESG K +PRK A L
Sbjct: 110 QGQGQVQ-DDATKTIDEKGSVASKPEKHVLNVLESGWELWYILSCMLRKPREPRKPAKLV 168
Query: 106 IDLADKEDCSQKQRVARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGL 165
DL DKE+CS+KQRVARTVI GGLLN MAE+VH+ A GTVCSVTYPLPKEEL++HGL
Sbjct: 169 TDLTDKENCSEKQRVARTVIFGGLLNDAMAEDVHQRAKETGTVCSVTYPLPKEELKKHGL 228
Query: 166 AQEGCKMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIP 225
Q+GC+ ASAVL+T+VK A +SVA+LHQKEIKGG VWARQLGGEG KTQKWKLIIRN+P
Sbjct: 229 EQDGCRSGASAVLFTSVKEARSSVAMLHQKEIKGGIVWARQLGGEGCKTQKWKLIIRNLP 288
Query: 226 FKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGK 285
FKAK NEIK +F G VW+V++PHN++TGLSKGFAFVKFTCK+DAE+AIQKFNGQKFGK
Sbjct: 289 FKAKPNEIKGVFESAGCVWDVFVPHNSETGLSKGFAFVKFTCKQDAENAIQKFNGQKFGK 348
Query: 286 RPIAVDWAVPKNIYSSGG----------AAAGVQNKGDGNSDSGSDDD--------LGD- 326
RPIAVDWAVPK IYSSG A+AG QN+ D + + DD +G
Sbjct: 349 RPIAVDWAVPKKIYSSGANVSAASEDGNASAGHQNEKDSSCEDSDYDDEDDNDTDVIGKK 408
Query: 327 ---DDAETASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKG 383
D S DS+ SEKED+P+ DF++E DIARKVL L +++ + L KG
Sbjct: 409 QQHDGVVVTSPDSDLSEKEDMPTEVDFEQEADIARKVLRNLIASSSDV--------LPKG 460
Query: 384 NKEQDS----DKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDN 439
+E ++ K ES +S S L+S KSKP + K +GED+LQ T+FI NLPFD+++
Sbjct: 461 IEELETVDVPSKLPGESENLSG-SPLSSGKSKPSNTKHIDGEDDLQRTVFISNLPFDVES 519
Query: 440 EEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKG 499
EVKQRFSAFGEV+SFVPVLHQVTKRP+GTGFLKFKT + ATAAVSA+ SGLGIFLKG
Sbjct: 520 GEVKQRFSAFGEVLSFVPVLHQVTKRPRGTGFLKFKTADGATAAVSAANVASGLGIFLKG 579
Query: 500 RQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQM 559
RQLTV KALDKK AHDKE +K+K E DHRNLYLAKEGLILEGTPAAEGVS DM+KR
Sbjct: 580 RQLTVFKALDKKSAHDKEKEKTKIEDRDHRNLYLAKEGLILEGTPAAEGVSISDMAKRNR 639
Query: 560 LHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFL 619
L E+KMTKL+SPNFHVSRTRLV+YNLPKSMTEK LKKL IDAV SRA+KQKPVI+Q+KFL
Sbjct: 640 LQEEKMTKLRSPNFHVSRTRLVVYNLPKSMTEKQLKKLFIDAVTSRATKQKPVIRQMKFL 699
Query: 620 QSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPSKLFYHH 665
+++KKGKV TK +SRGVAFVEFTEHQHALVALRVLNNNP H
Sbjct: 700 KNVKKGKVVTKDHSRGVAFVEFTEHQHALVALRVLNNNPETFGPEH 745
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + ++P+ +++++ FS VG + ++ + +GF FV+F K DA AI+
Sbjct: 21 LFVSSLPYSFTKSQLEETFSDVGPIRRCFMVTQKGSTEHRGFGFVQFALKDDANRAIEIK 80
Query: 279 NGQKFGKRPIAVDWAV 294
NG G R IAV A+
Sbjct: 81 NGSSVGGRKIAVKHAM 96
>gi|297744765|emb|CBI38027.3| unnamed protein product [Vitis vinifera]
Length = 918
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/686 (67%), Positives = 525/686 (76%), Gaps = 25/686 (3%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
MVT+KGS EHRGFG+VQFAV EDANRA+E+KNG+S+GGRKIGVK AMHR LEQRRSK
Sbjct: 50 MVTQKGSTEHRGFGFVQFAVKEDANRAIELKNGSSIGGRKIGVKLAMHRTPLEQRRSKEN 109
Query: 61 QEVQAEDIEKTMDNKDGVISGAEK-HSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQR 119
Q+ DI KT KD ++ H+S L E K V+ RKA D ADK S+KQR
Sbjct: 110 QD----DIIKTRTEKDSSSEVVKQGHASDLQEIEKHVELRKALKPCTDQADKGSFSEKQR 165
Query: 120 VARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVLY 179
VARTVI GGLLNADMAE VH A +GTVCSVTYPLPKEELE HGL+Q+GCK+DASAVLY
Sbjct: 166 VARTVIFGGLLNADMAEVVHLRAREVGTVCSVTYPLPKEELEHHGLSQDGCKIDASAVLY 225
Query: 180 TTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSP 239
++VK A ASVA+LHQKEIKGG VWARQLGGEGSKTQKWKLI+RN+PFKAKV EIKD+FS
Sbjct: 226 SSVKEAHASVAMLHQKEIKGGIVWARQLGGEGSKTQKWKLIVRNLPFKAKVTEIKDIFSS 285
Query: 240 VGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIY 299
G VW+ +IP N++TGLS+GFAFVKFT K+DAE+AIQKFNG+K GKRPIAVDWAVPK IY
Sbjct: 286 AGFVWDAFIPQNSETGLSRGFAFVKFTSKQDAENAIQKFNGEKIGKRPIAVDWAVPKKIY 345
Query: 300 SSGGAAAGVQNKGDGNSDSGSDDDLGDDDAE----------------TASDDSNSSEKED 343
+G G N G D DD + +A DDSN++EKE
Sbjct: 346 ITGANPVVASEDGQLNGRDGEGDTDSDDLEDDTTDIDNKVPHPQGVGSAPDDSNTTEKEV 405
Query: 344 LPSNADFDEEVDIARKVLNKL--TSTTGSLPSLSDDSALVKGNKEQDS-DKTVNESAKVS 400
+P+ DF+EE DIARKVL L +S G+LPS S + ++ D KT NES K S
Sbjct: 406 MPTEFDFNEEADIARKVLKNLITSSAKGTLPSSSGGPTDLNFDETIDVLKKTSNESEKAS 465
Query: 401 DVSKL-NSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVL 459
DV++ NSSKSK +L+ E ED+LQ TIFI NLPFD+D EEVKQ+FS FGEV SFVPVL
Sbjct: 466 DVTEPENSSKSKLLNLRPIESEDDLQRTIFISNLPFDIDKEEVKQQFSKFGEVQSFVPVL 525
Query: 460 HQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEID 519
HQVTKRPKGTGFLKF TV AA AAVSA+ TS LGIFLKGRQLT LKALDKK AHDKE+
Sbjct: 526 HQVTKRPKGTGFLKFNTVAAADAAVSAANPTSSLGIFLKGRQLTALKALDKKSAHDKELK 585
Query: 520 KSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTR 579
KSK E DHRNLYLAKEGLI+EGTPAAEGVS DMSKR ML +K TKL+SPNFHVSRTR
Sbjct: 586 KSKPEERDHRNLYLAKEGLIVEGTPAAEGVSASDMSKRHMLARQKDTKLESPNFHVSRTR 645
Query: 580 LVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFV 639
L+IYNLPKSMTEK +KKLCIDAV SRA+KQKP+IKQIKFL+ +KKGKV TK++SRGVAF+
Sbjct: 646 LIIYNLPKSMTEKEVKKLCIDAVTSRATKQKPMIKQIKFLKDMKKGKVVTKNHSRGVAFI 705
Query: 640 EFTEHQHALVALRVLNNNPSKLFYHH 665
EFTEHQHALVALRVLNNNP H
Sbjct: 706 EFTEHQHALVALRVLNNNPETFGPEH 731
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 127/308 (41%), Gaps = 49/308 (15%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + N P+ +++++ FS VG + ++ + +GF FV+F K DA AI+
Sbjct: 21 VFVSNFPYSFTNSQLEETFSDVGPIRRCFMVTQKGSTEHRGFGFVQFAVKEDANRAIELK 80
Query: 279 NGQKFGKRPIAVDWAVPKNIYSSGGAAAG----VQNKGDGNSDS-----GSDDDLGDDDA 329
NG G R I V A+ + + ++ + + +S S G DL + +
Sbjct: 81 NGSSIGGRKIGVKLAMHRTPLEQRRSKENQDDIIKTRTEKDSSSEVVKQGHASDLQEIEK 140
Query: 330 ET-----------ASDDSNSSEKEDLPS--------NADFDEEVDIARKVLNKLTSTTGS 370
+D + SEK+ + NAD E V + + + + S T
Sbjct: 141 HVELRKALKPCTDQADKGSFSEKQRVARTVIFGGLLNADMAEVVHLRAREVGTVCSVTYP 200
Query: 371 LP-------SLSDDSALVKGNKEQDSDKTVNESAKV--SDVSKLNSSKSKPKSL--KQT- 418
LP LS D + D+ + S K + V+ L+ + K + +Q
Sbjct: 201 LPKEELEHHGLSQDGCKI------DASAVLYSSVKEAHASVAMLHQKEIKGGIVWARQLG 254
Query: 419 -EGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVV-SFVPVLHQVTKRPKGTGFLKFKT 476
EG + + + NLPF E+K FS+ G V +F+P + T +G F+KF +
Sbjct: 255 GEGSKTQKWKLIVRNLPFKAKVTEIKDIFSSAGFVWDAFIP-QNSETGLSRGFAFVKFTS 313
Query: 477 VEAATAAV 484
+ A A+
Sbjct: 314 KQDAENAI 321
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
+T+F+ N P+ N ++++ FS G + V + + +G GF++F E A A+
Sbjct: 19 STVFVSNFPYSFTNSQLEETFSDVGPIRRCFMVTQKGSTEHRGFGFVQFAVKEDANRAIE 78
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDK 510
K S +G GR++ V A+ +
Sbjct: 79 L-KNGSSIG----GRKIGVKLAMHR 98
>gi|225427688|ref|XP_002274081.1| PREDICTED: uncharacterized protein LOC100257200 [Vitis vinifera]
Length = 972
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/701 (66%), Positives = 528/701 (75%), Gaps = 36/701 (5%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
MVT+KGS EHRGFG+VQFAV EDANRA+E+KNG+S+GGRKIGVK AMHR LEQRRSK
Sbjct: 50 MVTQKGSTEHRGFGFVQFAVKEDANRAIELKNGSSIGGRKIGVKLAMHRTPLEQRRSKEN 109
Query: 61 QEVQAEDIEKTMDNKDGVISGAEK-HSSKLLESG---------------KTVKPRKAATL 104
Q V ++DI KT KD ++ H+S L E G K V+ RKA
Sbjct: 110 QAVHSDDIIKTRTEKDSSSEVVKQGHASDLQEIGSMSLIFSSITFKNTEKHVELRKALKP 169
Query: 105 GIDLADKEDCSQKQRVARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHG 164
D ADK S+KQRVARTVI GGLLNADMAE VH A +GTVCSVTYPLPKEELE HG
Sbjct: 170 CTDQADKGSFSEKQRVARTVIFGGLLNADMAEVVHLRAREVGTVCSVTYPLPKEELEHHG 229
Query: 165 LAQEGCKMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNI 224
L+Q+GCK+DASAVLY++VK A ASVA+LHQKEIKGG VWARQLGGEGSKTQKWKLI+RN+
Sbjct: 230 LSQDGCKIDASAVLYSSVKEAHASVAMLHQKEIKGGIVWARQLGGEGSKTQKWKLIVRNL 289
Query: 225 PFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFG 284
PFKAKV EIKD+FS G VW+ +IP N++TGLS+GFAFVKFT K+DAE+AIQKFNG+K G
Sbjct: 290 PFKAKVTEIKDIFSSAGFVWDAFIPQNSETGLSRGFAFVKFTSKQDAENAIQKFNGEKIG 349
Query: 285 KRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAE-------------- 330
KRPIAVDWAVPK IY +G G N G D DD +
Sbjct: 350 KRPIAVDWAVPKKIYITGANPVVASEDGQLNGRDGEGDTDSDDLEDDTTDIDNKVPHPQG 409
Query: 331 --TASDDSNSSEKEDLPSNADFDEEVDIARKVLNKL--TSTTGSLPSLSDDSALVKGNKE 386
+A DDSN++EKE +P+ DF+EE DIARKVL L +S G+LPS S + ++
Sbjct: 410 VGSAPDDSNTTEKEVMPTEFDFNEEADIARKVLKNLITSSAKGTLPSSSGGPTDLNFDET 469
Query: 387 QDS-DKTVNESAKVSDVSKL-NSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQ 444
D KT NES K SDV++ NSSKSK +L+ E ED+LQ TIFI NLPFD+D EEVKQ
Sbjct: 470 IDVLKKTSNESEKASDVTEPENSSKSKLLNLRPIESEDDLQRTIFISNLPFDIDKEEVKQ 529
Query: 445 RFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV 504
+FS FGEV SFVPVLHQVTKRPKGTGFLKF TV AA AAVSA+ TS LGIFLKGRQLT
Sbjct: 530 QFSKFGEVQSFVPVLHQVTKRPKGTGFLKFNTVAAADAAVSAANPTSSLGIFLKGRQLTA 589
Query: 505 LKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKK 564
LKALDKK AHDKE+ KSK E DHRNLYLAKEGLI+EGTPAAEGVS DMSKR ML +K
Sbjct: 590 LKALDKKSAHDKELKKSKPEERDHRNLYLAKEGLIVEGTPAAEGVSASDMSKRHMLARQK 649
Query: 565 MTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKK 624
TKL+SPNFHVSRTRL+IYNLPKSMTEK +KKLCIDAV SRA+KQKP+IKQIKFL+ +KK
Sbjct: 650 DTKLESPNFHVSRTRLIIYNLPKSMTEKEVKKLCIDAVTSRATKQKPMIKQIKFLKDMKK 709
Query: 625 GKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPSKLFYHH 665
GKV TK++SRGVAF+EFTEHQHALVALRVLNNNP H
Sbjct: 710 GKVVTKNHSRGVAFIEFTEHQHALVALRVLNNNPETFGPEH 750
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + N P+ +++++ FS VG + ++ + +GF FV+F K DA AI+
Sbjct: 21 VFVSNFPYSFTNSQLEETFSDVGPIRRCFMVTQKGSTEHRGFGFVQFAVKEDANRAIELK 80
Query: 279 NGQKFGKRPIAVDWAV 294
NG G R I V A+
Sbjct: 81 NGSSIGGRKIGVKLAM 96
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
+T+F+ N P+ N ++++ FS G + V + + +G GF++F E A A+
Sbjct: 19 STVFVSNFPYSFTNSQLEETFSDVGPIRRCFMVTQKGSTEHRGFGFVQFAVKEDANRAIE 78
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDK 510
K S +G GR++ V A+ +
Sbjct: 79 L-KNGSSIG----GRKIGVKLAMHR 98
>gi|356546384|ref|XP_003541606.1| PREDICTED: RNA-binding protein 28-like [Glycine max]
Length = 956
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/689 (64%), Positives = 519/689 (75%), Gaps = 25/689 (3%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
MVT+KGS +HRGFGYVQFAV EDANRA+E+KNGTSV GRKI VKHAM R E+R+SK
Sbjct: 49 MVTQKGSAQHRGFGYVQFAVEEDANRAIELKNGTSVEGRKIVVKHAMPRPPREERQSKPN 108
Query: 61 QEVQAEDIEKTMDN-KDGVISGAEKHSS-------KLLESGKTVKPR--KAATLGIDLAD 110
Q + +D+ K D+ +DG SG+EK+ S ++ + T KP K + L D+AD
Sbjct: 109 QAGKTDDLTKPKDDDEDGRSSGSEKNVSVSKEEELQVSKQKSTRKPMEIKKSALCDDVAD 168
Query: 111 KEDCSQKQRVARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGC 170
+ CS+KQRVARTVI GGL+N+DMAEEVH A IGTVCS+ YPL ++LEQHGL Q+GC
Sbjct: 169 EGGCSEKQRVARTVIFGGLINSDMAEEVHSKAKEIGTVCSIKYPLSGKDLEQHGLLQDGC 228
Query: 171 KMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKV 230
+DASAVLYT+VKSA ASVA LH+KEI GG VWARQLGGEGSKTQKWKLIIRN+PFKAK
Sbjct: 229 TLDASAVLYTSVKSARASVATLHKKEIGGGNVWARQLGGEGSKTQKWKLIIRNLPFKAKD 288
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAV 290
NEI+DMFS G VW+V+IP DTGLSKGFAFVKFTCK+DAE AIQK NG KF KR IAV
Sbjct: 289 NEIRDMFSSAGYVWDVFIPQKPDTGLSKGFAFVKFTCKQDAEKAIQKLNGSKFAKRLIAV 348
Query: 291 DWAVPKNIYSSGGAAAGVQNKGDGN-SDSGS-DDDLGDDDAETA------SDDSNSSEKE 342
DWAV K I+SS A KG N SD S DDD DD + +D S++ E+E
Sbjct: 349 DWAVSKKIFSSDTNNALASEKGQKNLSDEDSTDDDFELDDKRSGQGDDSDTDYSSAMEEE 408
Query: 343 DLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTV------NES 396
P + +FD+E DIA+KVLN L +++ S ++DS L+K NKE SD+ V NES
Sbjct: 409 GTPED-NFDKEADIAKKVLNNLLTSSSKGTSANNDSMLIKENKESRSDEIVKDADEKNES 467
Query: 397 AKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFV 456
KVS VSK S S+ + ED+LQ T+FICNLPF+ DNEEVKQRFS FGEV FV
Sbjct: 468 GKVSGVSKPEISSRNNLSIPKRTEEDDLQGTVFICNLPFECDNEEVKQRFSGFGEVEYFV 527
Query: 457 PVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDK 516
PVLHQVTKRP+GTGFLKFKTVEAA A+S + SG+GI LKGR L VLKALDKK AHDK
Sbjct: 528 PVLHQVTKRPRGTGFLKFKTVEAANTAISTASAASGMGILLKGRPLKVLKALDKKSAHDK 587
Query: 517 EIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVS 576
E++K+KNE +DHRNLYLAKEGLILEGT AAEGVS DM KRQ L +KK TKLQSPNFHVS
Sbjct: 588 ELEKAKNEVHDHRNLYLAKEGLILEGTTAAEGVSASDMLKRQELEKKKKTKLQSPNFHVS 647
Query: 577 RTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGV 636
RTRL+IYNLPKSM EK LKKLCIDAV+SRA+KQKPVI+QIKFL++ KKG V + YSRGV
Sbjct: 648 RTRLIIYNLPKSMNEKELKKLCIDAVISRATKQKPVIRQIKFLKNEKKGNVAQERYSRGV 707
Query: 637 AFVEFTEHQHALVALRVLNNNPSKLFYHH 665
AFVEF+EHQHALVALRVLNNNP H
Sbjct: 708 AFVEFSEHQHALVALRVLNNNPETFGPEH 736
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+P+ +++++ FS VG V ++ + +GF +V+F + DA AI+
Sbjct: 20 LFVSNLPYSFSNSQLEETFSQVGPVRRCFMVTQKGSAQHRGFGYVQFAVEEDANRAIELK 79
Query: 279 NGQKFGKRPIAVDWAVPK 296
NG R I V A+P+
Sbjct: 80 NGTSVEGRKIVVKHAMPR 97
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Query: 411 KPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTG 470
K +K+ G++ +T+F+ NLP+ N ++++ FS G V V + + + +G G
Sbjct: 3 KKNKVKENGGKEHCPSTLFVSNLPYSFSNSQLEETFSQVGPVRRCFMVTQKGSAQHRGFG 62
Query: 471 FLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDK 510
+++F E A A+ TS ++GR++ V A+ +
Sbjct: 63 YVQFAVEEDANRAIELKNGTS-----VEGRKIVVKHAMPR 97
>gi|356542361|ref|XP_003539635.1| PREDICTED: RNA-binding protein 28-like [Glycine max]
Length = 958
Score = 833 bits (2153), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/693 (62%), Positives = 513/693 (74%), Gaps = 32/693 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
+VT+KGS +HRGFGYVQFAV EDANRA+E+KNGTSV GRKI VKHAM R E+R+SK
Sbjct: 49 IVTQKGSAQHRGFGYVQFAVEEDANRAIELKNGTSVEGRKIVVKHAMPRPPCEERQSKPN 108
Query: 61 QEVQAEDIEKTMDN-KDGVISGAEKHSSKLLESGKTV-------KPR--KAATLGIDLAD 110
+E + +D+ K D+ +D +SGAEK+ S L E V KP K + L D+ D
Sbjct: 109 KEGKTDDLTKPKDDDEDSTLSGAEKNVSVLKEEEVQVSKQKNMRKPTETKKSALCDDVPD 168
Query: 111 KEDCSQKQRVARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGC 170
+ CS+KQRVARTVI GGL+N+DMAEEVH A IGTVCS+ YPL +++LEQHGL Q+GC
Sbjct: 169 EGSCSEKQRVARTVIFGGLINSDMAEEVHGKAREIGTVCSIKYPLSRKDLEQHGLLQDGC 228
Query: 171 KMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKV 230
+DASAVLYT+VKSA ASVA LH+KEI GG +W RQLGGEGSKTQKWKLI+RN+PFKAK
Sbjct: 229 TLDASAVLYTSVKSARASVATLHRKEIGGGNIWVRQLGGEGSKTQKWKLIVRNLPFKAKE 288
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAV 290
NEI+DMFS G VW+V+IP T+T LSKGFAFVKFTCK+DAE AIQK NG KF KR IAV
Sbjct: 289 NEIRDMFSSAGCVWDVFIPQKTNTDLSKGFAFVKFTCKQDAEKAIQKLNGSKFAKRLIAV 348
Query: 291 DWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAE----------TASDDSNSSE 340
DWAV K I+SS A KG N SD+D D+D E + +D S++ E
Sbjct: 349 DWAVSKKIFSSDTNNALASEKGQQNM---SDEDSTDEDFELVDKRSGQGDSDTDYSSAME 405
Query: 341 KEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTV------- 393
+E P +FD+E DIA+KVLN L +++ S+++DS L+K NK SD+ V
Sbjct: 406 EEGTPPEDNFDKEADIAKKVLNNLLTSSSKGTSVNNDSMLIKENKGSRSDEIVKDADEKA 465
Query: 394 -NESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEV 452
NES KVS VSK S S+ L ED+LQ T+FI NLPF+ DNEEVKQRFS FGE+
Sbjct: 466 SNESEKVSGVSKPEIS-SRNNLLNPKGTEDDLQRTVFISNLPFECDNEEVKQRFSGFGEI 524
Query: 453 VSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKL 512
FVPVLHQVTKRP+GTGFLKFKTVEAA +S ++ SG+GI LKGR L VLKALDKK
Sbjct: 525 EYFVPVLHQVTKRPRGTGFLKFKTVEAANTVISTARAASGMGILLKGRPLKVLKALDKKS 584
Query: 513 AHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPN 572
AHDKE++K+KNE +DHRNLYLAKEGLILEGT AAEGVS DM KR L KK TKLQSPN
Sbjct: 585 AHDKELEKAKNEVHDHRNLYLAKEGLILEGTTAAEGVSASDMLKRLELERKKKTKLQSPN 644
Query: 573 FHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHY 632
FHVSRTRL+IYNLPKSM EK LKK CIDAVVSRA+KQKPVI+QIKFL++ KKG V + Y
Sbjct: 645 FHVSRTRLIIYNLPKSMNEKELKKFCIDAVVSRATKQKPVIRQIKFLKNEKKGNVAQERY 704
Query: 633 SRGVAFVEFTEHQHALVALRVLNNNPSKLFYHH 665
SRGVAFVEF+EHQHALVALRVLNNNP H
Sbjct: 705 SRGVAFVEFSEHQHALVALRVLNNNPETFGPEH 737
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+P+ +++++ FS VG V +I + +GF +V+F + DA AI+
Sbjct: 20 LFVSNLPYSFSNSQLEETFSEVGPVRRCFIVTQKGSAQHRGFGYVQFAVEEDANRAIELK 79
Query: 279 NGQKFGKRPIAVDWAVPK 296
NG R I V A+P+
Sbjct: 80 NGTSVEGRKIVVKHAMPR 97
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 55/107 (51%), Gaps = 5/107 (4%)
Query: 411 KPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTG 470
K +K+ G++ +T+F+ NLP+ N ++++ FS G V V + + + +G G
Sbjct: 3 KKNKVKENGGKEHCSSTLFVSNLPYSFSNSQLEETFSEVGPVRRCFIVTQKGSAQHRGFG 62
Query: 471 FLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDKE 517
+++F E A A+ TS ++GR++ V A+ + +++
Sbjct: 63 YVQFAVEEDANRAIELKNGTS-----VEGRKIVVKHAMPRPPCEERQ 104
>gi|449461647|ref|XP_004148553.1| PREDICTED: RNA-binding protein 28-like [Cucumis sativus]
Length = 966
Score = 807 bits (2084), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/697 (61%), Positives = 514/697 (73%), Gaps = 42/697 (6%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
MVT+KGS EHRGFG+VQFAV EDANRA+++KNG S GRKI VKHAMHRA LEQRRSK
Sbjct: 54 MVTQKGSTEHRGFGFVQFAVAEDANRAIQLKNGLSFEGRKITVKHAMHRAPLEQRRSKEN 113
Query: 61 Q----------EVQAEDIEKTMDNKDGVIS-------GAEKHSSKLLESG--------KT 95
Q E +E+ KD S E+ +SK E +
Sbjct: 114 QVAGSTLAANEEGDTSKMEEHPTTKDKGTSKRDVQPINEERDTSKRAEQTISNSEGKERH 173
Query: 96 VKPRKAATLGIDLADKEDCSQKQRVARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPL 155
+ RK A L L DKE S KQR+ARTV+IGGLL+ DMAE+VHR +G VCS+ YPL
Sbjct: 174 LSARKLAPLSSYLEDKEGHSGKQRIARTVVIGGLLDGDMAEDVHRQVRDVGGVCSIVYPL 233
Query: 156 PKEELEQHGLAQEGCKMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQ 215
P++E+EQHG+ ++GCKMD SAVL+ +VKSA A+VA+LHQKE+KGG VWARQLGGEGSKTQ
Sbjct: 234 PRKEVEQHGILRDGCKMDVSAVLFDSVKSARAAVAILHQKEMKGGVVWARQLGGEGSKTQ 293
Query: 216 KWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAI 275
KWK+I+RN+PFKAK EIK+ FS G VW+V +P N+DTGLSKGFAFVKFTCK+DAESAI
Sbjct: 294 KWKVIVRNLPFKAKEKEIKNTFSSAGFVWDVMMPQNSDTGLSKGFAFVKFTCKQDAESAI 353
Query: 276 QKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGN--------SDSGSDDDLGDD 327
QKFNG+KFG+R IAVDWAVPK IYSSGG A + D + S SGSD +
Sbjct: 354 QKFNGKKFGQRTIAVDWAVPKKIYSSGGGATAPVDSDDEDQTERDREGSISGSDSRDENT 413
Query: 328 DAETASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTG--SLPSLSDDSALVKGNK 385
+ S SEKED+ S DF+ E +IARKVL L S++ +LPSL+D + K NK
Sbjct: 414 GHNESESSSEDSEKEDISSEVDFEGETEIARKVLETLISSSAKEALPSLTDGNPPSKVNK 473
Query: 386 EQDSDKTVNESAKVSDVS----KLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEE 441
E D D + S VS KL S+SK LKQT+ ED L+ T++I NLPFD+DNEE
Sbjct: 474 EPDFDSSKKSSDMSDKVSNEPGKL--SESKTSILKQTDEED-LKRTVYIGNLPFDIDNEE 530
Query: 442 VKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQ 501
VKQRFS FGEV+SFVPVLHQVTKRPKGTGFLKFKT +AA AVS++ SG+GIFLKGRQ
Sbjct: 531 VKQRFSGFGEVLSFVPVLHQVTKRPKGTGFLKFKTADAANVAVSSANAASGVGIFLKGRQ 590
Query: 502 LTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLH 561
L VL ALDKK A DKE++KSKN+ +DHRNLYLA+EG+ILEGTPAAEGVS DM KRQ L
Sbjct: 591 LKVLNALDKKSAQDKELEKSKNDNHDHRNLYLAQEGIILEGTPAAEGVSASDMEKRQRLE 650
Query: 562 EKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQS 621
+K+ TKLQSPNFHVSRTRLVI+NLPKSM EK L KLCI+AV SRA+KQKPVI+QIKFL+
Sbjct: 651 KKRTTKLQSPNFHVSRTRLVIHNLPKSMKEKELHKLCIEAVTSRATKQKPVIRQIKFLKD 710
Query: 622 LKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
+KKGK+ TK++S GVAF+EF+EH+HALVALRVLNNNP
Sbjct: 711 VKKGKMLTKNHSCGVAFIEFSEHEHALVALRVLNNNP 747
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 26/167 (15%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + N P+ +++++ FS VG V ++ + +GF FV+F DA AIQ
Sbjct: 25 VFVNNFPYSFTNSQLEETFSDVGPVRRCFMVTQKGSTEHRGFGFVQFAVAEDANRAIQLK 84
Query: 279 NGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDDSNS 338
NG F R I V A+ + A Q + N +GS A+++ ++
Sbjct: 85 NGLSFEGRKITVKHAMHR--------APLEQRRSKENQVAGS--------TLAANEEGDT 128
Query: 339 SEKEDLPSNAD----------FDEEVDIARKVLNKLTSTTGSLPSLS 375
S+ E+ P+ D +EE D +++ ++++ G LS
Sbjct: 129 SKMEEHPTTKDKGTSKRDVQPINEERDTSKRAEQTISNSEGKERHLS 175
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 422 DELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAAT 481
D +T+F+ N P+ N ++++ FS G V V + + +G GF++F E A
Sbjct: 19 DHCPSTVFVNNFPYSFTNSQLEETFSDVGPVRRCFMVTQKGSTEHRGFGFVQFAVAEDAN 78
Query: 482 AAVSASKTTSGLGIFLKGRQLTVLKALDK 510
A+ G+ +GR++TV A+ +
Sbjct: 79 RAIQLKN-----GLSFEGRKITVKHAMHR 102
>gi|357441411|ref|XP_003590983.1| Eukaryotic translation initiation factor 3 subunit G [Medicago
truncatula]
gi|355480031|gb|AES61234.1| Eukaryotic translation initiation factor 3 subunit G [Medicago
truncatula]
Length = 962
Score = 801 bits (2068), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/697 (61%), Positives = 510/697 (73%), Gaps = 42/697 (6%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
MVT+KGS +HRGFGYVQFAV +DAN+A+E+KN + VG RKI VKHA+ R E RRSK
Sbjct: 52 MVTQKGSTQHRGFGYVQFAVEKDANQAIELKNSSLVGDRKIVVKHAIPRPPRENRRSKPD 111
Query: 61 QEVQAEDI-EKTMDNKDGVISGAEKHSS----------KLLE----SGKTVKPRKAATLG 105
QE D+ E D+KD +SGAEK S K+L+ S K V+ +KAA L
Sbjct: 112 QEGNEGDLTESKNDDKDSELSGAEKPVSVPKEPKEEEVKVLDKPKNSRKPVEIKKAA-LC 170
Query: 106 IDLADKEDCSQKQRVARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGL 165
D AD+ S+KQ+VARTVI GGL+N+ MAE+VHR A IGTVCS+ +PL + +L+QHGL
Sbjct: 171 NDAADEGGGSEKQKVARTVIFGGLVNSAMAEDVHRQAREIGTVCSIKHPLSRNDLQQHGL 230
Query: 166 AQEGCKMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIP 225
QEGC +ASAVLYT+VKSA ASVA LH+KEI GGTVWARQLGGEG+KTQKWKLI+RN+P
Sbjct: 231 LQEGCTFNASAVLYTSVKSARASVATLHKKEIGGGTVWARQLGGEGAKTQKWKLIVRNLP 290
Query: 226 FKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGK 285
FKAK NEI+D FS G VW V+IP +DTGLSKGFAFVKFTCK+DAE+AI+K NG KFG
Sbjct: 291 FKAKENEIRDAFSSAGTVWEVFIPQKSDTGLSKGFAFVKFTCKQDAENAIRKLNGSKFGS 350
Query: 286 RPIAVDWAVPKNIYSSG-----GAAAGVQNKGDGNSDSGSDDDLGDDDAET-ASDDSN-- 337
R IAVDWAVPK I+SS + G Q D + + ++DDL + D ++ DDS+
Sbjct: 351 RLIAVDWAVPKKIFSSDTNDAPASEEGQQKVTDEDGSTTTEDDLENTDKKSDQGDDSDID 410
Query: 338 SSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTVN--- 394
S +ED+PS DFD+E DIARKVLN L +++ S+++DS + + S +TV
Sbjct: 411 SVVEEDVPSEDDFDKEADIARKVLNNLITSSAKDESVNNDSVSSEEKNKPKSKETVKGAD 470
Query: 395 -----ESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAF 449
ES KVSD+SK +SK E ED+L T+FI NLPF+LD EE+KQRFSAF
Sbjct: 471 SKTSKESDKVSDISKPETSK---------ETEDDLHRTVFITNLPFELDTEELKQRFSAF 521
Query: 450 GEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALD 509
GEV F PVLHQVTKRP+GTGFLKFKT EAA A+S + T SG+GI +KGR L VLKALD
Sbjct: 522 GEVEYFAPVLHQVTKRPRGTGFLKFKTAEAADNAISTANTASGMGILVKGRPLKVLKALD 581
Query: 510 KKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQ 569
KK AHDKE +K KNE DHRNLYLAKEGLIL+GTPAAEGVS DMSKR+ L KK TKLQ
Sbjct: 582 KKSAHDKEQEKEKNEVQDHRNLYLAKEGLILDGTPAAEGVSATDMSKRKNLERKKKTKLQ 641
Query: 570 SPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGK-VD 628
SPNFHVS+TRLVIYNLPKSMTEK LK LCIDAV+SRA+KQ PVI+QIK L+ +KGK
Sbjct: 642 SPNFHVSKTRLVIYNLPKSMTEKQLKTLCIDAVISRATKQIPVIRQIKILKDGRKGKATQ 701
Query: 629 TKHYSRGVAFVEFTEHQHALVALRVLNNNPSKLFYHH 665
+ YSRGVAF+EF+EHQHALVALRVLNNNP H
Sbjct: 702 EQQYSRGVAFLEFSEHQHALVALRVLNNNPETFGPEH 738
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+P+ ++++ FS VG V ++ + +GF +V+F ++DA AI+
Sbjct: 23 LFVSNLPYSFTNSQLEQTFSEVGPVRRCFMVTQKGSTQHRGFGYVQFAVEKDANQAIELK 82
Query: 279 NGQKFGKRPIAVDWAVPK 296
N G R I V A+P+
Sbjct: 83 NSSLVGDRKIVVKHAIPR 100
>gi|297824993|ref|XP_002880379.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326218|gb|EFH56638.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 988
Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/740 (54%), Positives = 503/740 (67%), Gaps = 82/740 (11%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
++T KGSNEHRGF +V FA+ ED NRA+E+KNG++ GGR+I VK A +R SL++RR+K
Sbjct: 51 LITNKGSNEHRGFAFVTFALPEDVNRAIELKNGSTFGGRRITVKQATNRPSLKERRTKAV 110
Query: 61 QEVQAEDIEKTMDNKDGVISGAE----------------KHSSKLLESGKTVKP------ 98
Q + D + +KD +I + K K +ES K KP
Sbjct: 111 QGISLPDDSQAQSDKDTLIPETDEKVPPPETKVEKPIERKKVEKPIESKKVEKPIERKKV 170
Query: 99 -----------------------RKAAT-LGIDLADKEDCSQKQRVARTVIIGGLLNADM 134
RK T L +DL DKE CS KQRVARTVI GGL NA+M
Sbjct: 171 EKPIESKKVEKPIERKQVEKPIERKGPTKLHVDLPDKETCSDKQRVARTVIFGGLANAEM 230
Query: 135 AEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVLYTTVKSACASVALLHQ 194
AE VH IGTVCSV YPLPKEEL+Q+GL Q+GC+ +ASAVL+T+VKSACA VA LHQ
Sbjct: 231 AEVVHSRVKEIGTVCSVRYPLPKEELQQNGLTQDGCRAEASAVLFTSVKSACAVVAKLHQ 290
Query: 195 KEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDT 254
EIKG +WARQLGGEGSK QKWKLIIRN+PF+AK ++IK++FS VG VW+V+IP N +T
Sbjct: 291 TEIKGNLIWARQLGGEGSKAQKWKLIIRNLPFQAKPSDIKEVFSAVGFVWDVFIPKNFET 350
Query: 255 GLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYS-----SGGAAAGVQ 309
GL KGFAFVKFTCK+DAE+AIQ FNG FGKRPIAVDWAVPKN+Y+ + +A G Q
Sbjct: 351 GLPKGFAFVKFTCKKDAENAIQMFNGHMFGKRPIAVDWAVPKNLYNGAADATTASADGDQ 410
Query: 310 NKGDGNSDSGSDDDLGDDDAETAS------------------DDSNSSEKEDLPSNADFD 351
DG+SD+ S D DDA + +S++ EK D+ ++ +F
Sbjct: 411 KGSDGDSDNSSVDLEEVDDAVESHPPSGDDTDDEEEDGSNKLSESDALEK-DVGTDVNFK 469
Query: 352 EEVDIARKVL-NKLTSTTGSLPSLSDDSALVKGNKEQDSDKTVNESAK-VSDVS----KL 405
EE D+ARKVL N L S+ GS+ S ++ +E D K N S K V+D S L
Sbjct: 470 EEADVARKVLKNLLASSKGSIASPDGET------EESDKSKLKNSSTKPVADSSGVSEPL 523
Query: 406 NSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKR 465
S K+K + K+T+ + + T+FI N+PFD+ EEVKQ+F+ FGEV S VL++VTKR
Sbjct: 524 KSGKTKEVAPKETQENEHFERTLFIRNIPFDVTKEEVKQKFAVFGEVESLFLVLNKVTKR 583
Query: 466 PKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNET 525
P+GT FLKFK +A+ AA+SA+ T SG+G+ LKGRQL V++A+ KK AHD E+ K++ +
Sbjct: 584 PEGTAFLKFKKADASVAAISAANTASGVGVLLKGRQLNVMRAVGKKAAHDIELKKTEEKN 643
Query: 526 NDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNL 585
DHRNLYLAKEG IL+ +PAAEGVS +DM +R+ LHE KM KLQSPNFHVSRTRLVIYNL
Sbjct: 644 VDHRNLYLAKEGQILDDSPAAEGVSAEDMDRRRRLHENKMKKLQSPNFHVSRTRLVIYNL 703
Query: 586 PKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQ 645
PKSM +K L KL +DAV SRA+KQKP I+QIKFLQ+ KKGKVDTK+YSRGVAFVEFTEH+
Sbjct: 704 PKSMNQKQLHKLLVDAVTSRATKQKPGIRQIKFLQNEKKGKVDTKNYSRGVAFVEFTEHE 763
Query: 646 HALVALRVLNNNPSKLFYHH 665
HALVALRVLNNNP H
Sbjct: 764 HALVALRVLNNNPETFGPQH 783
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%)
Query: 205 RQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVK 264
R+ G E S + + +P+ ++++ FS VG V Y+ N + +GFAFV
Sbjct: 8 RKDGEEKSPQSATTVCVSGLPYSITNAQLEEAFSEVGPVRRCYLITNKGSNEHRGFAFVT 67
Query: 265 FTCKRDAESAIQKFNGQKFGKRPIAVDWAV 294
F D AI+ NG FG R I V A
Sbjct: 68 FALPEDVNRAIELKNGSTFGGRRITVKQAT 97
>gi|255543791|ref|XP_002512958.1| RNA-binding protein, putative [Ricinus communis]
gi|223547969|gb|EEF49461.1| RNA-binding protein, putative [Ricinus communis]
Length = 916
Score = 751 bits (1939), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/680 (59%), Positives = 495/680 (72%), Gaps = 67/680 (9%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
+VT+KGS+EHRGFG+VQFA+ EDANRA+E+K+G+SV G+KI VKHAM RA L+QRR+K
Sbjct: 54 LVTQKGSSEHRGFGFVQFAIKEDANRAIELKDGSSVSGQKIFVKHAMSRAPLDQRRAKAA 113
Query: 61 QEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQRV 120
Q V+++ KT ++ V +K++SKL E+ K +KPRK L +L D+E+CS+KQRV
Sbjct: 114 QVVESDGAAKTENDTTRV----DKYASKLTEAVKHLKPRKPVKLSSELVDEENCSEKQRV 169
Query: 121 ARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVLYT 180
ARTVI GGLL+ MAEEVHRLA +G CSVTYPLPKE+LE++GLAQ+GC+ D SA+LYT
Sbjct: 170 ARTVIFGGLLDDAMAEEVHRLAREVGNACSVTYPLPKEDLEKNGLAQDGCRSDVSAILYT 229
Query: 181 TVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPV 240
+VK A SV +LHQKEI+GG VWARQLGGEGSKTQKWKLI+RN+PFKA
Sbjct: 230 SVKEARLSVRMLHQKEIRGGIVWARQLGGEGSKTQKWKLIVRNLPFKA------------ 277
Query: 241 GLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYS 300
I++FN QK+GKRP+AVDWAV K +YS
Sbjct: 278 ----------------------------------IKQFNLQKYGKRPMAVDWAVSKKMYS 303
Query: 301 SGGAAA-----GVQNKGDGNSDSGSDDDLGDDDAETASDDSNSSEKEDLPSNADFDEEVD 355
SG + G QN+ DG+SD DD+ DD + ASD+S+ EK D+P+ DFD E D
Sbjct: 304 SGAIGSVPPEEGHQNESDGSSDDTEDDENDDD-VDGASDNSDPFEKNDMPTEGDFDAEAD 362
Query: 356 IARKVLNKLT-STTGSLPSLSDDSALVKGNKEQDSDKTVNESAKVSDVSKLNSSKSKPKS 414
+ARKVLN +T S+ G+ DDS + G ++ +SD+TV S V + S + P+
Sbjct: 363 MARKVLNSITLSSKGTSTIDVDDSVVPMGTQKPNSDETVILPKSNSSVQENMSGFTVPEK 422
Query: 415 LKQTEG---------EDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKR 465
+++ +D+LQ T+FI NLPFD DNEEVKQRFS FGEV SFVPVLHQVTKR
Sbjct: 423 SGKSDSADVRKAAIDDDDLQRTVFISNLPFDADNEEVKQRFSVFGEVKSFVPVLHQVTKR 482
Query: 466 PKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNET 525
P+GTGFLKFKT +AA AAVSA+ SGLGI LKGRQLTVLKALDK AH+KE++K+KNE
Sbjct: 483 PRGTGFLKFKTEDAAIAAVSAANLASGLGILLKGRQLTVLKALDKNSAHNKEMEKAKNED 542
Query: 526 NDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNL 585
NDHRNLYLAKEG+ILEGTPA+EGVS DM KR+ LHEKKMTKL+SPNFHVSR RLV+YNL
Sbjct: 543 NDHRNLYLAKEGVILEGTPASEGVSASDMDKRKALHEKKMTKLRSPNFHVSRNRLVVYNL 602
Query: 586 PKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQ 645
P S+TEK LKKLCIDAV+SRA+KQKPVI+QIKFLQS K GKV TK++SRGVAF+EFTEHQ
Sbjct: 603 PHSVTEKKLKKLCIDAVISRATKQKPVIRQIKFLQSTKTGKV-TKNHSRGVAFIEFTEHQ 661
Query: 646 HALVALRVLNNNPSKLFYHH 665
HALVALRVLNNNP H
Sbjct: 662 HALVALRVLNNNPETFGPEH 681
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
NT+F+ N P N ++++ FS G + V + + +G GF++F E A A+
Sbjct: 23 NTVFVSNFPRSFTNSQLEETFSDVGPIRRCFLVTQKGSSEHRGFGFVQFAIKEDANRAIE 82
Query: 486 A--SKTTSGLGIFLK 498
+ SG IF+K
Sbjct: 83 LKDGSSVSGQKIFVK 97
Score = 39.3 bits (90), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 47/103 (45%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + N P +++++ FS VG + ++ + +GF FV+F K DA AI+
Sbjct: 25 VFVSNFPRSFTNSQLEETFSDVGPIRRCFLVTQKGSSEHRGFGFVQFAIKEDANRAIELK 84
Query: 279 NGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSD 321
+G + I V A+ + A A + DG + + +D
Sbjct: 85 DGSSVSGQKIFVKHAMSRAPLDQRRAKAAQVVESDGAAKTEND 127
>gi|18399701|ref|NP_565513.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|4567275|gb|AAD23688.1| expressed protein [Arabidopsis thaliana]
gi|16604631|gb|AAL24108.1| unknown protein [Arabidopsis thaliana]
gi|27754736|gb|AAO22811.1| unknown protein [Arabidopsis thaliana]
gi|330252084|gb|AEC07178.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 1003
Score = 733 bits (1892), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/760 (52%), Positives = 496/760 (65%), Gaps = 105/760 (13%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
+VT KGS+EHRGF +V+FA+ ED NRA+E+KNG++VGGR+I VK A HR SL++RR+K
Sbjct: 51 LVTNKGSDEHRGFAFVKFALQEDVNRAIELKNGSTVGGRRITVKQAAHRPSLQERRTKAA 110
Query: 61 QEVQAEDIEKTMDNKDGVI-------SGAEKHSSKLLESGKTVKP-----------RKAA 102
+ + D + +KD I S EK K +E K KP RK A
Sbjct: 111 EGISVPDNSQGQSDKDTSIPETDEKVSPPEKKLEKPVERKKVEKPIERKQVEKPVERKKA 170
Query: 103 TLGID----------------------------------------------LADKEDCSQ 116
I+ L DKE CS
Sbjct: 171 EKPIELKQVEKPFERKQVEKPVERKQVEKPVERKQVEKPIERKRPTKLHVDLPDKETCSD 230
Query: 117 KQRVARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASA 176
KQRVARTVI GGL NA+MAE VH IGTVCSV YPLPKEEL+Q+GL Q+GC+ +ASA
Sbjct: 231 KQRVARTVIFGGLANAEMAEVVHSRVKEIGTVCSVRYPLPKEELQQNGLTQDGCRAEASA 290
Query: 177 VLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDM 236
VL+T+VKSACA+VA LHQ E+KG +WARQLGGEGSK QKWKLIIRN+PF+AK ++IK +
Sbjct: 291 VLFTSVKSACAAVAKLHQTEVKGNLIWARQLGGEGSKAQKWKLIIRNLPFQAKPSDIKVV 350
Query: 237 FSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPK 296
FS VG VW+V+IP N +TGL KGFAFVKFTCK+DA +AI+KFNG FGKRPIAVDWAVPK
Sbjct: 351 FSAVGFVWDVFIPKNFETGLPKGFAFVKFTCKKDAANAIKKFNGHMFGKRPIAVDWAVPK 410
Query: 297 NIYSSGGAAAGVQNKGDGNSDSGSDD----DLGDDDAETAS------------------D 334
NIY+ A GD G + DL + D S
Sbjct: 411 NIYNGAADATTASADGDKEGSDGDSENSSVDLEEVDEAVESHPPPGDDTDDDEDGSNKLT 470
Query: 335 DSNSSEKEDLPSNADFDEEVDIARKVL-NKLTSTTGSLPSLSDDSALVKGNKEQ------ 387
+S++ +K D+ ++ +F++E D+ARKVL N L S+ GS +A +G E+
Sbjct: 471 ESDALDK-DVGTDMNFEDEADVARKVLKNLLASSKGS-------TATPEGETEESDKSKL 522
Query: 388 --DSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQR 445
S K V +S+ VS+ L S K+K + K+T+ D+ + T+FI NLPFD+ EEVKQR
Sbjct: 523 KSSSTKPVADSSGVSE--PLKSGKTKVVAPKETQDNDDFERTLFIRNLPFDVTKEEVKQR 580
Query: 446 FSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVL 505
F+ FGEV S VLH+VTKRP+GT F+KFKT +A+ AA+SA+ T SG+G+ LKGRQL V+
Sbjct: 581 FTVFGEVESLSLVLHKVTKRPEGTAFVKFKTADASVAAISAADTASGVGVLLKGRQLNVM 640
Query: 506 KALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKM 565
+A+ KK A D E+ K++ + DHRNLYLAKEG IL+ TPAAEGVS +DM KR+ LHE KM
Sbjct: 641 RAVGKKAAKDIELKKTEEKNVDHRNLYLAKEGQILDDTPAAEGVSAEDMDKRRRLHENKM 700
Query: 566 TKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKG 625
LQSPNFHVSRTRLVIYNLPKSM K L +L +DAV SRA+KQKP I+QIKFLQ+ KKG
Sbjct: 701 KMLQSPNFHVSRTRLVIYNLPKSMNPKQLNRLLVDAVTSRATKQKPCIRQIKFLQNEKKG 760
Query: 626 KVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPSKLFYHH 665
KVDTK+YSRGVAFVEFTEH+HALVALRVLNNNP H
Sbjct: 761 KVDTKNYSRGVAFVEFTEHEHALVALRVLNNNPETFGPQH 800
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 2/126 (1%)
Query: 205 RQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVK 264
R+ G E S + + +P+ ++++ FS VG V ++ N + +GFAFVK
Sbjct: 8 RKDGEEKSPHAAATVCVSGLPYSITNAQLEEAFSEVGPVRRCFLVTNKGSDEHRGFAFVK 67
Query: 265 FTCKRDAESAIQKFNGQKFGKRPIAVDWAV--PKNIYSSGGAAAGVQNKGDGNSDSGSDD 322
F + D AI+ NG G R I V A P AA G+ + S D
Sbjct: 68 FALQEDVNRAIELKNGSTVGGRRITVKQAAHRPSLQERRTKAAEGISVPDNSQGQSDKDT 127
Query: 323 DLGDDD 328
+ + D
Sbjct: 128 SIPETD 133
>gi|125546077|gb|EAY92216.1| hypothetical protein OsI_13935 [Oryza sativa Indica Group]
Length = 960
Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/693 (51%), Positives = 460/693 (66%), Gaps = 37/693 (5%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
MV KGS RGFG+VQFA ++DA R+++ K+G SV GRKI VK A HRA L++R K
Sbjct: 65 MVAPKGSETSRGFGFVQFATVQDAERSIQRKDGFSVAGRKIRVKLATHRAPLKERLQKKE 124
Query: 61 QEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPR------KAATLGIDLADKEDC 114
VQA+D + T + KD + K ++ E+ T + K T + L KE
Sbjct: 125 NAVQAKDADATNEAKDADATNEAKDANATNEADATSTAKHKETSHKTDTEPLQLLKKETT 184
Query: 115 ---------------SQKQRVARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEE 159
S+KQRVA+TVI GGL + MA EV RLAG IGTV SV+YPLPKEE
Sbjct: 185 LSKEVSISNTAKVKSSEKQRVAKTVIFGGLRDFAMASEVFRLAGEIGTVVSVSYPLPKEE 244
Query: 160 LEQHGLAQEGCKMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKL 219
+E HGL ++GC DA+AVL+ +VKSA SV LH+KE+KG VWARQLGGEGSK +KW++
Sbjct: 245 MELHGLERDGCTTDAAAVLFASVKSAWDSVVHLHRKEVKGAVVWARQLGGEGSKIRKWRV 304
Query: 220 IIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFN 279
I+RN+PFK V EI D+FS G +W+V IP + G SKGFAFV FT K+DAE+AI+ N
Sbjct: 305 IVRNLPFKITVKEIMDIFSLAGFIWDVSIPQKSYDGASKGFAFVSFTRKQDAENAIKNVN 364
Query: 280 GQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDDSNSS 339
G+ KR +AVDWAVPK +Y+ ++ ++ SD GSD++ +D DDS
Sbjct: 365 GKVVAKRTVAVDWAVPKKVYTVAAKSSTKDDELANVSDRGSDEE--SEDNLVGEDDSYEL 422
Query: 340 EKE--DLPSNADFDEEVDIARKVL-NKLTSTTGSLPSLSDDSAL-VKGNKEQDS----DK 391
E+E + P++ DF E+DI+RKVL N + S+ + PS ++ S + EQD+ K
Sbjct: 423 EQETSNCPADDDFKTEMDISRKVLENLIKSSERAEPSGNEGSDIDTDTETEQDTSEKKQK 482
Query: 392 TVNESAKVSDVSKLNSSK---SKPKSLKQTEGEDE---LQNTIFICNLPFDLDNEEVKQR 445
+ A V KL +SK + +L T+ E + L T+FI NLPFDL NEEV +R
Sbjct: 483 QTHLPASVPAADKLENSKRVAQEENTLPATKFEKQDAGLDRTLFISNLPFDLSNEEVTER 542
Query: 446 FSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVL 505
FSAFG+V SF PVLH++TKRP+GTGFLKF T EAA AAVSA+ GLGIF+K R L ++
Sbjct: 543 FSAFGKVESFFPVLHKLTKRPRGTGFLKFSTPEAADAAVSAASAAPGLGIFIKSRALKIM 602
Query: 506 KALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKM 565
KALDK+ AH KE++K+KNE D RNLYL KEG IL GTPAAEGVSD DM+KR L +K
Sbjct: 603 KALDKESAHKKELEKAKNEVEDRRNLYLTKEGEILAGTPAAEGVSDADMNKRSWLARRKA 662
Query: 566 TKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKG 625
LQSP FHVS+TRL+IYNLPK+MT +KKLC +AV+SRA KQ PVI+++ L++ KK
Sbjct: 663 EMLQSPKFHVSKTRLIIYNLPKTMTINDVKKLCREAVISRAHKQNPVIRKVNILKNEKKS 722
Query: 626 KVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
+ +SRGVAFV+F EH+HALVALRVLNNNP
Sbjct: 723 SSTAQKHSRGVAFVDFQEHEHALVALRVLNNNP 755
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 11/180 (6%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + N+P+ K ++++ +FS VG V ++ + S+GF FV+F +DAE +IQ+
Sbjct: 36 VFVSNLPYTFKSSDLEAVFSEVGPVRRCFMVAPKGSETSRGFGFVQFATVQDAERSIQRK 95
Query: 279 NGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDG--NSDSGSDDDLGDDDAETASDDS 336
+G R I V A + +Q K + D+ + ++ D DA + D+
Sbjct: 96 DGFSVAGRKIRVKLATHR-----APLKERLQKKENAVQAKDADATNEAKDADATNEAKDA 150
Query: 337 NSSEKEDLPSNADFDE---EVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTV 393
N++ + D S A E + D L K +T S+S ++A VK +++Q KTV
Sbjct: 151 NATNEADATSTAKHKETSHKTDTEPLQLLKKETTLSKEVSIS-NTAKVKSSEKQRVAKTV 209
Score = 38.9 bits (89), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
+T+F+ NLP+ + +++ FS G V V + ++ +G GF++F TV+ A ++
Sbjct: 34 STVFVSNLPYTFKSSDLEAVFSEVGPVRRCFMVAPKGSETSRGFGFVQFATVQDAERSIQ 93
Query: 486 ASKTTSGLGIFLKGRQLTV 504
G + GR++ V
Sbjct: 94 RKD-----GFSVAGRKIRV 107
>gi|115455989|ref|NP_001051595.1| Os03g0801800 [Oryza sativa Japonica Group]
gi|108711601|gb|ABF99396.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113550066|dbj|BAF13509.1| Os03g0801800 [Oryza sativa Japonica Group]
gi|215695092|dbj|BAG90283.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625982|gb|EEE60114.1| hypothetical protein OsJ_12988 [Oryza sativa Japonica Group]
Length = 959
Score = 639 bits (1648), Expect = e-180, Method: Compositional matrix adjust.
Identities = 356/693 (51%), Positives = 460/693 (66%), Gaps = 38/693 (5%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
MV KGS RGFG+VQFA ++DA R+++ K+G SV GRKI VK A HRA L++R K
Sbjct: 65 MVAPKGSETSRGFGFVQFATVQDAERSIQQKDGFSVAGRKIRVKLATHRAPLKERLQKKE 124
Query: 61 QEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPR------KAATLGIDLADKEDC 114
VQA+D + T + KD + K ++ E+ T + K T + L KE
Sbjct: 125 NAVQAKDADATNEAKDADATNEAKDANATNEAYATSTAKHKETSHKTDTEPLQLLKKETT 184
Query: 115 ---------------SQKQRVARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEE 159
S+KQRVA+TVI GGL + MA EV RLAG IGTV SV+YPLPKEE
Sbjct: 185 LSKEVSISNTAKVKSSEKQRVAKTVIFGGLRDFAMASEVFRLAGEIGTVVSVSYPLPKEE 244
Query: 160 LEQHGLAQEGCKMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKL 219
+E HGL ++GC DA+AVL+ +VKSA SV LH+KE+KG VWARQLGGEGSK +KW++
Sbjct: 245 MELHGLERDGCTTDAAAVLFASVKSAWDSVVHLHRKEVKGAVVWARQLGGEGSKIRKWRV 304
Query: 220 IIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFN 279
I+RN+PFK V EI D+FS G +W+V IP +D G SKGFAFV FT K+DAE+AI+ N
Sbjct: 305 IVRNLPFKITVKEIMDIFSLAGFIWDVSIPQKSDDGASKGFAFVSFTRKQDAENAIKNVN 364
Query: 280 GQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDDSNSS 339
G+ KR +AVDWAVPK +Y+ ++ ++ SD GSD++ +D DDS
Sbjct: 365 GKVVAKRTVAVDWAVPKKVYTVAAKSSTKDDELANVSDRGSDEE--SEDNLVGEDDSYEL 422
Query: 340 EKE--DLPSNADFDEEVDIARKVL-NKLTSTTGSLPSLSDDSAL-VKGNKEQDS----DK 391
E+E + P++ DF E+DI+RKVL N + S+ + PS ++ S + EQD+ K
Sbjct: 423 EQETSNCPAD-DFKTEMDISRKVLENLIKSSERAEPSGNEGSDIDTDTETEQDTSEKKQK 481
Query: 392 TVNESAKVSDVSKLNSSK---SKPKSLKQTEGEDE---LQNTIFICNLPFDLDNEEVKQR 445
+ V KL +SK + +L T+ + + L T+FI NLPFDL NEEV +R
Sbjct: 482 QTHLPTSVPAADKLENSKRVAQEENTLPATKFKKQDAGLDRTLFISNLPFDLSNEEVTER 541
Query: 446 FSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVL 505
FSAFG+V SF PVLH++TKRP+GTGFLKF T EAA AAVSA+ GLGIF+K R L ++
Sbjct: 542 FSAFGKVESFFPVLHKLTKRPRGTGFLKFSTPEAADAAVSAANAAPGLGIFIKSRALKIM 601
Query: 506 KALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKM 565
KALDK+ AH KE++K+KNE D RNLYL KEG IL GTPAAEGVSD DM+KR L +K
Sbjct: 602 KALDKESAHKKELEKAKNEVEDRRNLYLTKEGEILAGTPAAEGVSDADMNKRSWLARRKA 661
Query: 566 TKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKG 625
LQSP FHVS+TRL+IYNLPK+MT +KKLC +AV+SRA KQ PVI+++ L++ KK
Sbjct: 662 EMLQSPKFHVSKTRLIIYNLPKTMTINDVKKLCREAVISRAHKQNPVIRKVNILKNEKKS 721
Query: 626 KVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
+ +SRGVAFV+F EH+HALVALRVLNNNP
Sbjct: 722 SSTAQKHSRGVAFVDFQEHEHALVALRVLNNNP 754
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + N+P+ K ++++ +FS VG V ++ + S+GF FV+F +DAE +IQ+
Sbjct: 36 VFVSNLPYTFKSSDLEAVFSEVGPVRRCFMVAPKGSETSRGFGFVQFATVQDAERSIQQK 95
Query: 279 NGQKFGKRPIAVDWAV 294
+G R I V A
Sbjct: 96 DGFSVAGRKIRVKLAT 111
Score = 38.9 bits (89), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
+T+F+ NLP+ + +++ FS G V V + ++ +G GF++F TV+ A ++
Sbjct: 34 STVFVSNLPYTFKSSDLEAVFSEVGPVRRCFMVAPKGSETSRGFGFVQFATVQDAERSIQ 93
Query: 486 ASKTTSGLGIFLKGRQLTV 504
G + GR++ V
Sbjct: 94 QKD-----GFSVAGRKIRV 107
>gi|326519426|dbj|BAJ96712.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 992
Score = 629 bits (1622), Expect = e-177, Method: Compositional matrix adjust.
Identities = 358/720 (49%), Positives = 462/720 (64%), Gaps = 69/720 (9%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
MV KGS +GFG+VQFA ++DA RA++ KNG +V GRKI VK A+ RA L++R K
Sbjct: 76 MVASKGSETSKGFGFVQFATVQDAERAIQQKNGFAVAGRKIRVKLAIQRAPLKERLQK-K 134
Query: 61 QEVQAEDIEKTMDNKDGVISGAEK--HSSKLLESGKTVKPRK----AATLGIDLADKEDC 114
+ VQA+D + +D K +S ++G P K A + I+ DK
Sbjct: 135 ESVQADDSSAKDEEEDNPTPAPVKLKETSHKTDTGPPQLPAKDTKVAKEVSINATDKTKS 194
Query: 115 SQKQRVARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDA 174
S+KQR+A+TVI GGL + MA EV RLAG IGTV SV YPLPKEE++ HGLA++GC DA
Sbjct: 195 SEKQRIAKTVIFGGLQDFSMASEVFRLAGEIGTVVSVNYPLPKEEMDLHGLARDGCTSDA 254
Query: 175 SAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIK 234
+AVL+++VKSA +V LLH KEIKG VWARQLGGEGSK +KW++I+RN+PFK + EI
Sbjct: 255 AAVLFSSVKSAWEAVVLLHHKEIKGAIVWARQLGGEGSKIRKWRVIVRNLPFKVTIKEIM 314
Query: 235 DMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAV 294
D+FS VW+V IP +D G SKGFAF+ FT K+DAE+AI+ NG+ KR +AVDWAV
Sbjct: 315 DIFSCEAFVWDVSIPQKSDDGKSKGFAFLSFTRKQDAENAIKNVNGKVIAKRTVAVDWAV 374
Query: 295 PKNIYSSGGAAAGVQNKGD--------GNSDSGSDDDL--GDDDAETASDDSNSSEKEDL 344
PKN+Y+ AA KGD G+ + S+D+L GDD + D +S + L
Sbjct: 375 PKNVYA---VAAKSDAKGDELEDISDKGSDEESSEDNLVGGDDSDDNCELDQETSNR--L 429
Query: 345 PSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSD------------KT 392
P + DF E DI+RKVL L ++ +S+ + + E ++D +T
Sbjct: 430 PED-DFKSEADISRKVLENLIKSSEKSERSGVESSDIDTDSETENDTPEKSSDIDTDSET 488
Query: 393 VNES--------------AKVSDVSKLNS--SKSKP------------------KSLKQT 418
N++ A+ DV+K S SKP SLK
Sbjct: 489 ENDTPKKKQPQSPAAVKLAESKDVTKAESIIPASKPAAVMLAEPKLVAETESTVPSLKPN 548
Query: 419 EGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVE 478
+ + L TIFI NLPFD+ NEEV +RFS FG+V SF PVLH++TKRP+GTGFLKF T E
Sbjct: 549 KEDTGLDRTIFISNLPFDISNEEVTERFSVFGKVQSFFPVLHKLTKRPRGTGFLKFSTAE 608
Query: 479 AATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGL 538
AA AAVSA+ GLGIF+K R L V KALDK+ AH KE++K KNE D RNLYL+KEG
Sbjct: 609 AADAAVSAANAAPGLGIFVKSRPLNVKKALDKESAHKKELEKGKNEIEDRRNLYLSKEGE 668
Query: 539 ILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLC 598
IL GTPAAEGVSD DM+KR L ++K L SP FHVSRTRL+IYNLPK++T +KKLC
Sbjct: 669 ILPGTPAAEGVSDVDMNKRSWLAKRKAEMLVSPKFHVSRTRLIIYNLPKTLTINDVKKLC 728
Query: 599 IDAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
+AV+SRA+KQ PVI+++ L + KKG+ + +SRGVAFV+F EH+HALVALRVLNNNP
Sbjct: 729 REAVISRATKQNPVIRKVNILNNEKKGQGAAQKHSRGVAFVDFQEHEHALVALRVLNNNP 788
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + N+P+ K ++++ +FS VG V ++ + + SKGF FV+F +DAE AIQ+
Sbjct: 47 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 106
Query: 279 NGQKFGKRPIAVDWAV 294
NG R I V A+
Sbjct: 107 NGFAVAGRKIRVKLAI 122
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
+T+F+ NLP+ + +++ FS G V V + ++ KG GF++F TV+ A A+
Sbjct: 45 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 104
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDK 510
G + GR++ V A+ +
Sbjct: 105 QKN-----GFAVAGRKIRVKLAIQR 124
>gi|29150367|gb|AAO72376.1| putative RNA binding ribonucleoprotein [Oryza sativa Japonica
Group]
Length = 975
Score = 629 bits (1621), Expect = e-177, Method: Compositional matrix adjust.
Identities = 356/709 (50%), Positives = 460/709 (64%), Gaps = 54/709 (7%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
MV KGS RGFG+VQFA ++DA R+++ K+G SV GRKI VK A HRA L++R K
Sbjct: 65 MVAPKGSETSRGFGFVQFATVQDAERSIQQKDGFSVAGRKIRVKLATHRAPLKERLQKKE 124
Query: 61 QEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPR------KAATLGIDLADKEDC 114
VQA+D + T + KD + K ++ E+ T + K T + L KE
Sbjct: 125 NAVQAKDADATNEAKDADATNEAKDANATNEAYATSTAKHKETSHKTDTEPLQLLKKETT 184
Query: 115 ---------------SQKQRVARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEE 159
S+KQRVA+TVI GGL + MA EV RLAG IGTV SV+YPLPKEE
Sbjct: 185 LSKEVSISNTAKVKSSEKQRVAKTVIFGGLRDFAMASEVFRLAGEIGTVVSVSYPLPKEE 244
Query: 160 LEQHGLAQEGCKMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGE--------- 210
+E HGL ++GC DA+AVL+ +VKSA SV LH+KE+KG VWARQLGGE
Sbjct: 245 MELHGLERDGCTTDAAAVLFASVKSAWDSVVHLHRKEVKGAVVWARQLGGELFPQLPAVV 304
Query: 211 -------GSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFV 263
GSK +KW++I+RN+PFK V EI D+FS G +W+V IP +D G SKGFAFV
Sbjct: 305 SNLLAIQGSKIRKWRVIVRNLPFKITVKEIMDIFSLAGFIWDVSIPQKSDDGASKGFAFV 364
Query: 264 KFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDD 323
FT K+DAE+AI+ NG+ KR +AVDWAVPK +Y+ ++ ++ SD GSD++
Sbjct: 365 SFTRKQDAENAIKNVNGKVVAKRTVAVDWAVPKKVYTVAAKSSTKDDELANVSDRGSDEE 424
Query: 324 LGDDDAETASDDSNSSEKE--DLPSNADFDEEVDIARKVL-NKLTSTTGSLPSLSDDSAL 380
+D DDS E+E + P++ DF E+DI+RKVL N + S+ + PS ++ S +
Sbjct: 425 --SEDNLVGEDDSYELEQETSNCPAD-DFKTEMDISRKVLENLIKSSERAEPSGNEGSDI 481
Query: 381 -VKGNKEQDS----DKTVNESAKVSDVSKLNSSK---SKPKSLKQTEGEDE---LQNTIF 429
EQD+ K + V KL +SK + +L T+ + + L T+F
Sbjct: 482 DTDTETEQDTSEKKQKQTHLPTSVPAADKLENSKRVAQEENTLPATKFKKQDAGLDRTLF 541
Query: 430 ICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKT 489
I NLPFDL NEEV +RFSAFG+V SF PVLH++TKRP+GTGFLKF T EAA AAVSA+
Sbjct: 542 ISNLPFDLSNEEVTERFSAFGKVESFFPVLHKLTKRPRGTGFLKFSTPEAADAAVSAANA 601
Query: 490 TSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGV 549
GLGIF+K R L ++KALDK+ AH KE++K+KNE D RNLYL KEG IL GTPAAEGV
Sbjct: 602 APGLGIFIKSRALKIMKALDKESAHKKELEKAKNEVEDRRNLYLTKEGEILAGTPAAEGV 661
Query: 550 SDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQ 609
SD DM+KR L +K LQSP FHVS+TRL+IYNLPK+MT +KKLC +AV+SRA KQ
Sbjct: 662 SDADMNKRSWLARRKAEMLQSPKFHVSKTRLIIYNLPKTMTINDVKKLCREAVISRAHKQ 721
Query: 610 KPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
PVI+++ L++ KK + +SRGVAFV+F EH+HALVALRVLNNNP
Sbjct: 722 NPVIRKVNILKNEKKSSSTAQKHSRGVAFVDFQEHEHALVALRVLNNNP 770
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + N+P+ K ++++ +FS VG V ++ + S+GF FV+F +DAE +IQ+
Sbjct: 36 VFVSNLPYTFKSSDLEAVFSEVGPVRRCFMVAPKGSETSRGFGFVQFATVQDAERSIQQK 95
Query: 279 NGQKFGKRPIAVDWAV 294
+G R I V A
Sbjct: 96 DGFSVAGRKIRVKLAT 111
>gi|242037751|ref|XP_002466270.1| hypothetical protein SORBIDRAFT_01g004800 [Sorghum bicolor]
gi|241920124|gb|EER93268.1| hypothetical protein SORBIDRAFT_01g004800 [Sorghum bicolor]
Length = 924
Score = 625 bits (1613), Expect = e-176, Method: Compositional matrix adjust.
Identities = 356/687 (51%), Positives = 454/687 (66%), Gaps = 50/687 (7%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQR-RSKV 59
MV +KGS + RGFG+VQFA ++DA+RA++ KNG V GRKI VK AM+RA L++R + K
Sbjct: 65 MVAEKGSEKSRGFGFVQFATVQDADRAIQQKNGFPVAGRKIRVKLAMNRAPLKERLQKKE 124
Query: 60 TQEVQAEDIEKTMDNKDGVISGAEKHSSKL-----------LESGKTVKPRKAATLGIDL 108
+V+ D + D + AEKH K L S + P++A I
Sbjct: 125 NMQVKDSDAKDEADE----TAPAEKHKGKSHKTDPEPEQPHLLSKDAMVPKEAP---IGD 177
Query: 109 ADKEDCSQKQRVARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQE 168
+K S+KQRVA+TVI GGL ++ MA EV R A IG+V SV YPLPK E++ HGLA++
Sbjct: 178 PEKVKSSEKQRVAKTVIFGGLQDSAMASEVFRQAREIGSVVSVNYPLPKGEMDFHGLARD 237
Query: 169 GCKMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKA 228
GC D +AVL+ +VKSAC SV LH+KE+KG VWARQLGGEGSK +KW++I+RN+PFK
Sbjct: 238 GCTSDMAAVLFASVKSACDSVVQLHRKEVKGAIVWARQLGGEGSKIRKWRVIVRNLPFKI 297
Query: 229 KVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPI 288
EI DMF G VW+V IPH +D G+SKGFAFV FT K+DAE+AI+ NG+ KRP+
Sbjct: 298 TEKEIMDMFGSAGFVWDVSIPHKSDEGISKGFAFVSFTRKQDAENAIKNINGKVVAKRPV 357
Query: 289 AVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDD------LGDDDAETASDDSNSSEKE 342
AVDWAVPK +Y+ A N+ + D+ SDDD +G+ +E + SN
Sbjct: 358 AVDWAVPKKVYTVAAKADAKDNEPENIPDNVSDDDTSDDSLVGEASSELDLETSNR---- 413
Query: 343 DLPSNADFDEEVDIARKVL-NKLTSTTGSLPSLSDDSAL--------VKGNKEQDSDKTV 393
PS DF E DI+RKVL N + S+ S PS + S + V KE+
Sbjct: 414 --PSEDDFKAEADISRKVLENLIKSSEKSEPSAIEGSDIDTDTETEDVASEKEKSDSPVA 471
Query: 394 NESAKVSDVS--KLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGE 451
+ AK V+ ++++ SKPK K G L TIFI NLPFD+ NEEV RFS FG+
Sbjct: 472 GKLAKSKPVTDAEISNPASKPK--KNDTG---LDRTIFISNLPFDISNEEVTARFSVFGK 526
Query: 452 VVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKK 511
V SF PVLH++TKRP+GTGF+KF T EAA AAVSA+ GLGI LK R L V+KA+DK+
Sbjct: 527 VESFFPVLHKLTKRPRGTGFMKFSTTEAADAAVSAANVAPGLGISLKSRPLNVMKAMDKE 586
Query: 512 LAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSP 571
AH K ++K+K E D RNLYLAKEG IL GTPAAEGVSD DM+KR L +K LQSP
Sbjct: 587 SAHKKALEKAKTEVEDRRNLYLAKEGEILAGTPAAEGVSDADMNKRNWLARRKAEMLQSP 646
Query: 572 NFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVDTKH 631
FHVSRTRL+IYNLPK+MT +KKLC +AV+SRA+KQ PVI+++ L++ KKG +
Sbjct: 647 KFHVSRTRLIIYNLPKTMTINDVKKLCREAVISRATKQNPVIRKVNILKNEKKG---VQK 703
Query: 632 YSRGVAFVEFTEHQHALVALRVLNNNP 658
+SRGVAFV+F EH+HALVALRVLNNNP
Sbjct: 704 HSRGVAFVDFQEHEHALVALRVLNNNP 730
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + N+P+ K ++++ +FS VG V ++ + S+GF FV+F +DA+ AIQ+
Sbjct: 36 VFVSNLPYTFKSSDLEAVFSEVGPVRRCFMVAEKGSEKSRGFGFVQFATVQDADRAIQQK 95
Query: 279 NGQKFGKRPIAVDWAV 294
NG R I V A+
Sbjct: 96 NGFPVAGRKIRVKLAM 111
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
+T+F+ NLP+ + +++ FS G V V + +++ +G GF++F TV+ A A+
Sbjct: 34 STVFVSNLPYTFKSSDLEAVFSEVGPVRRCFMVAEKGSEKSRGFGFVQFATVQDADRAIQ 93
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDK 510
G + GR++ V A+++
Sbjct: 94 QKN-----GFPVAGRKIRVKLAMNR 113
>gi|357110649|ref|XP_003557129.1| PREDICTED: RNA-binding protein 28-like [Brachypodium distachyon]
Length = 958
Score = 624 bits (1608), Expect = e-176, Method: Compositional matrix adjust.
Identities = 359/696 (51%), Positives = 450/696 (64%), Gaps = 44/696 (6%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
MV KGS+ RGFG+VQFA ++DA RA++ KNG +V GRKI VK A+ RA L++R K
Sbjct: 64 MVASKGSDTSRGFGFVQFATVQDAERAIQQKNGYTVAGRKIRVKLAIQRAPLKERLQK-K 122
Query: 61 QEVQAEDIEKTMDNKDGVISGAEKHSS----KLLESGKTVKPRKAATLGIDLADKEDCSQ 116
+ VQAED D D K +S S K K K A+ I DK S+
Sbjct: 123 ENVQAEDSNPKDDEDDTSTPVKHKETSHNTGPPQPSTKDTKVVKQAS--IKATDKVKSSE 180
Query: 117 KQRVARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASA 176
QRVA+TVI GGL + A EV RLAG IGTV SV YPLPKEE+E HGLA++GC DA+A
Sbjct: 181 NQRVAKTVIFGGLHDFSTASEVFRLAGEIGTVVSVNYPLPKEEMELHGLARDGCTPDAAA 240
Query: 177 VLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDM 236
VL+ +VKSA SV LLH+KE+KG VWARQLGGEGSK +KW++I+RN+PFK + EI D+
Sbjct: 241 VLFASVKSAWDSVVLLHRKEVKGAIVWARQLGGEGSKIRKWRVIVRNLPFKITLKEIMDV 300
Query: 237 FSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPK 296
FS G VW+V IP +D G SKGFAFV FT K+DAE+AI+ NG+ KR +AVDWAVPK
Sbjct: 301 FSSEGFVWDVSIPQKSDDGKSKGFAFVSFTRKQDAENAIKNVNGKVIAKRTVAVDWAVPK 360
Query: 297 NIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDDSNSSEKEDLPSNA----DFDE 352
N+Y+ + ++ SD GSDD+ +D+ D + E + SN DF
Sbjct: 361 NVYAVAAKSDAKDDELADVSDKGSDDESSEDNLVGGDDSDDGCELDQEISNHLADDDFKS 420
Query: 353 EVDIARKVL-NKLTSTTGSLPSLSDDSALVKGNKEQDSDKTVNESAKVSDVSKLNSSK-- 409
E DI+RKVL N + S+ S PS + S + + E ++D + + + KL SK
Sbjct: 421 EADISRKVLENLIKSSEKSEPSDVEGSD-IDTDTETENDTSEEKKLHSPEAVKLGESKHV 479
Query: 410 ---------SKPKSLKQTEG-----------------EDE-LQNTIFICNLPFDLDNEEV 442
SKP ++K E ED L T+FI NLPFD+ EEV
Sbjct: 480 TEAESTVLSSKPTAVKVAESKHVTEAESTVPALKPKKEDTGLDRTVFISNLPFDISKEEV 539
Query: 443 KQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQL 502
+RFS FG+V SF PVLH++TKRP GTGFLKF T EAA AAVSA+ GLGIF+K R L
Sbjct: 540 TERFSVFGKVQSFFPVLHKLTKRPIGTGFLKFSTAEAADAAVSAANVAPGLGIFIKSRAL 599
Query: 503 TVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHE 562
V KALDK+ AH KE +K KNE D RNLYL+KEG IL GTPAAEGVSD DM+KR L +
Sbjct: 600 NVKKALDKESAHKKEQEKGKNEIEDRRNLYLSKEGEILPGTPAAEGVSDVDMNKRNWLAK 659
Query: 563 KKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSL 622
+K L SP FHVSRTRL+IYNLPK+M+ +KKLC +AV+SRA+KQ PVI+++ L++
Sbjct: 660 RKAEMLVSPKFHVSRTRLIIYNLPKTMSINDVKKLCREAVISRATKQNPVIRKVNILKNE 719
Query: 623 KKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
KKG + +SRGVAFV+F EH+HALVALRVLNNNP
Sbjct: 720 KKGAA--QKHSRGVAFVDFQEHEHALVALRVLNNNP 753
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 208 GGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTC 267
GG G T + + N+P+ K ++++ +FS VG V ++ + + S+GF FV+F
Sbjct: 25 GGSGGHTPS-TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSDTSRGFGFVQFAT 83
Query: 268 KRDAESAIQKFNGQKFGKRPIAVDWAV 294
+DAE AIQ+ NG R I V A+
Sbjct: 84 VQDAERAIQQKNGYTVAGRKIRVKLAI 110
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
+T+F+ NLP+ + +++ FS G V V + + +G GF++F TV+ A A+
Sbjct: 33 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSDTSRGFGFVQFATVQDAERAIQ 92
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDK 510
G + GR++ V A+ +
Sbjct: 93 QKN-----GYTVAGRKIRVKLAIQR 112
>gi|449516393|ref|XP_004165231.1| PREDICTED: RNA-binding protein 28-like, partial [Cucumis sativus]
Length = 678
Score = 566 bits (1459), Expect = e-158, Method: Compositional matrix adjust.
Identities = 302/462 (65%), Positives = 356/462 (77%), Gaps = 17/462 (3%)
Query: 211 GSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRD 270
GSKTQKWK+I+RN+PFKAK EIK+ FS G VW+V +P N+DTGLSKGFAFVKFTCK+D
Sbjct: 1 GSKTQKWKVIVRNLPFKAKEKEIKNTFSSAGFVWDVMMPQNSDTGLSKGFAFVKFTCKQD 60
Query: 271 AESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGN--------SDSGSDD 322
AESAIQKFNG+KFG+R IAVDWAVPK IYSSGG A + D + S SGSD
Sbjct: 61 AESAIQKFNGKKFGQRTIAVDWAVPKKIYSSGGGATAPVDSDDEDQTERDREGSISGSDS 120
Query: 323 DLGDDDAETASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTG--SLPSLSDDSAL 380
+ + S SEKED+ S DF+ E +IARKVL L S++ +LPSL+D +
Sbjct: 121 RDENTGHNESESSSEDSEKEDISSEVDFEGETEIARKVLETLISSSAKEALPSLTDGNPP 180
Query: 381 VKGNKEQDSDKTVNESAKVSDVS----KLNSSKSKPKSLKQTEGEDELQNTIFICNLPFD 436
K NKE D D + S VS KL S+SK LKQT+ ED L+ T++I NLPFD
Sbjct: 181 SKVNKEPDFDSSKKSSDMSDKVSNEPGKL--SESKTSILKQTDEED-LKRTVYIGNLPFD 237
Query: 437 LDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIF 496
+DNEEVKQRFS FGEV+SFVPVLHQVTKRPKGTGFLKFKT +AA AVS++ SG+GIF
Sbjct: 238 IDNEEVKQRFSGFGEVLSFVPVLHQVTKRPKGTGFLKFKTADAANVAVSSANAASGVGIF 297
Query: 497 LKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSK 556
LKGRQL VL ALDKK A DKE++KSKN+ +DHRNLYLA+EG+ILEGTPAAEGVS DM K
Sbjct: 298 LKGRQLKVLNALDKKSAQDKELEKSKNDNHDHRNLYLAQEGIILEGTPAAEGVSASDMEK 357
Query: 557 RQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQI 616
RQ L +K+ TKLQSPNFHVSRTRLVI+NLPKSM EK L KLCI+AV SRA+KQKPVI+QI
Sbjct: 358 RQRLEKKRTTKLQSPNFHVSRTRLVIHNLPKSMKEKELHKLCIEAVTSRATKQKPVIRQI 417
Query: 617 KFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
KFL+ +KKGK+ TK++S GVAF+EF+EH+HALVALRVLNNNP
Sbjct: 418 KFLKDVKKGKMLTKNHSCGVAFIEFSEHEHALVALRVLNNNP 459
>gi|222626076|gb|EEE60208.1| hypothetical protein OsJ_13177 [Oryza sativa Japonica Group]
Length = 878
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 326/679 (48%), Positives = 415/679 (61%), Gaps = 83/679 (12%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
MV KGS RGFG+VQFA ++DA R+++ K+G SV GRKI VK A HRA L++R K
Sbjct: 58 MVAPKGSETSRGFGFVQFATVKDAERSIQQKDGFSVAGRKIRVKLATHRAPLKERLQKK- 116
Query: 61 QEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQRV 120
E M KD ++ K + E+ D ++ED +
Sbjct: 117 --------ENAMQAKDADVTNEAKDADSTNEAQDA-----------DATNEEDDTS---- 153
Query: 121 ARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVLYT 180
A E H+ + GL ++GC DA+AVL+
Sbjct: 154 ----------TAKHKETSHK--------------------KDAGLERDGCTTDAAAVLFA 183
Query: 181 TVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPV 240
+V SA SV LH+KE+KG VWARQLGGEGSK +KW++I+RN+PFK V EI DMFS
Sbjct: 184 SVTSAWDSVVHLHRKEVKGAVVWARQLGGEGSKIRKWRVIVRNLPFKITVKEIMDMFSLA 243
Query: 241 GLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYS 300
G VW+V IP +D G SKGFAFV FT K+DAE+AI+ NG+ KR +AVDWAVPK +Y+
Sbjct: 244 GFVWDVSIPQKSDNGTSKGFAFVSFTRKQDAENAIKNVNGKVVAKRTVAVDWAVPKKVYT 303
Query: 301 SGGAAAGVQ-----NKGDGNSDSGSDDDL-GDDDAETASDDSNSSEKEDLPSNADFDEEV 354
A + + N D SD S+D+L G+DD+ E + P++ DF+ E+
Sbjct: 304 VAAAKSSAKDDELVNVSDKGSDEESEDNLVGEDDSYELD-----QEASNRPADDDFETEI 358
Query: 355 DIARKVL-NKLTSTTGSLPSLSDDSAL-VKGNKEQDS----DKTVNESAKVSDVSKLNSS 408
DI+RKVL N + S+ + PS ++ S + EQD+ K + A V KL +S
Sbjct: 359 DISRKVLENLIKSSEKAEPSGNEGSDVDTDTETEQDTSEKKQKQTHLPASVPAADKLENS 418
Query: 409 K---------SKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVL 459
K K KQ G L TIFICNLPFDL NEEV +RFSAFG+V SF PVL
Sbjct: 419 KRVAEEENTLPASKFKKQDAG---LDRTIFICNLPFDLSNEEVTERFSAFGKVESFFPVL 475
Query: 460 HQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEID 519
H++TKRP+GTGFLKF T EAA AAVSA+ GLGIF+K R L ++KALDK+ AH KE++
Sbjct: 476 HKLTKRPRGTGFLKFSTAEAADAAVSAANAAPGLGIFIKSRALKIMKALDKESAHKKELE 535
Query: 520 KSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTR 579
KSKNE D RNLYL KEG IL GTPAAEGVSD DM+KR L +K LQSP FHVSRTR
Sbjct: 536 KSKNEVEDRRNLYLTKEGEILAGTPAAEGVSDADMNKRSWLARRKAEMLQSPKFHVSRTR 595
Query: 580 LVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFV 639
L+IYNLPK+MT +KKLC +AV+SRA KQ P+I+++ L++ KK + +SRGVAFV
Sbjct: 596 LIIYNLPKTMTINDVKKLCREAVISRAHKQNPIIRKVNILKNEKKSNSTAQKHSRGVAFV 655
Query: 640 EFTEHQHALVALRVLNNNP 658
+F EH+HALVALRVLNNNP
Sbjct: 656 DFQEHEHALVALRVLNNNP 674
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + N+P+ K +++ +FS VG V ++ + S+GF FV+F +DAE +IQ+
Sbjct: 29 VFVSNLPYTFKSADLEAVFSEVGPVRRCFMVAPKGSETSRGFGFVQFATVKDAERSIQQK 88
Query: 279 NGQKFGKRPIAVDWAV 294
+G R I V A
Sbjct: 89 DGFSVAGRKIRVKLAT 104
>gi|27545034|gb|AAO18440.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|108711831|gb|ABF99626.1| RNA recognition motif family protein [Oryza sativa Japonica Group]
Length = 885
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 327/686 (47%), Positives = 415/686 (60%), Gaps = 90/686 (13%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
MV KGS RGFG+VQFA ++DA R+++ K+G SV GRKI VK A HRA L++R K
Sbjct: 58 MVAPKGSETSRGFGFVQFATVKDAERSIQQKDGFSVAGRKIRVKLATHRAPLKERLQKK- 116
Query: 61 QEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQRV 120
E M KD ++ K + E+ D ++ED +
Sbjct: 117 --------ENAMQAKDADVTNEAKDADSTNEAQDA-----------DATNEEDDTS---- 153
Query: 121 ARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVLYT 180
A E H+ + GL ++GC DA+AVL+
Sbjct: 154 ----------TAKHKETSHK--------------------KDAGLERDGCTTDAAAVLFA 183
Query: 181 TVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPV 240
+V SA SV LH+KE+KG VWARQLGGEGSK +KW++I+RN+PFK V EI DMFS
Sbjct: 184 SVTSAWDSVVHLHRKEVKGAVVWARQLGGEGSKIRKWRVIVRNLPFKITVKEIMDMFSLA 243
Query: 241 GLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAE-------SAIQKFNGQKFGKRPIAVDWA 293
G VW+V IP +D G SKGFAFV FT K+DAE SAI+ NG+ KR +AVDWA
Sbjct: 244 GFVWDVSIPQKSDNGTSKGFAFVSFTRKQDAENVWSVPCSAIKNVNGKVVAKRTVAVDWA 303
Query: 294 VPKNIYSSGGAAAGVQ-----NKGDGNSDSGSDDDL-GDDDAETASDDSNSSEKEDLPSN 347
VPK +Y+ A + + N D SD S+D+L G+DD+ E + P++
Sbjct: 304 VPKKVYTVAAAKSSAKDDELVNVSDKGSDEESEDNLVGEDDSYELD-----QEASNRPAD 358
Query: 348 ADFDEEVDIARKVL-NKLTSTTGSLPSLSDDSAL-VKGNKEQDS----DKTVNESAKVSD 401
DF+ E+DI+RKVL N + S+ + PS ++ S + EQD+ K + A V
Sbjct: 359 DDFETEIDISRKVLENLIKSSEKAEPSGNEGSDVDTDTETEQDTSEKKQKQTHLPASVPA 418
Query: 402 VSKLNSSK---------SKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEV 452
KL +SK K KQ G L TIFICNLPFDL NEEV +RFSAFG+V
Sbjct: 419 ADKLENSKRVAEEENTLPASKFKKQDAG---LDRTIFICNLPFDLSNEEVTERFSAFGKV 475
Query: 453 VSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKL 512
SF PVLH++TKRP+GTGFLKF T EAA AAVSA+ GLGIF+K R L ++KALDK+
Sbjct: 476 ESFFPVLHKLTKRPRGTGFLKFSTAEAADAAVSAANAAPGLGIFIKSRALKIMKALDKES 535
Query: 513 AHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPN 572
AH KE++KSKNE D RNLYL KEG IL GTPAAEGVSD DM+KR L +K LQSP
Sbjct: 536 AHKKELEKSKNEVEDRRNLYLTKEGEILAGTPAAEGVSDADMNKRSWLARRKAEMLQSPK 595
Query: 573 FHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHY 632
FHVSRTRL+IYNLPK+MT +KKLC +AV+SRA KQ P+I+++ L++ KK + +
Sbjct: 596 FHVSRTRLIIYNLPKTMTINDVKKLCREAVISRAHKQNPIIRKVNILKNEKKSNSTAQKH 655
Query: 633 SRGVAFVEFTEHQHALVALRVLNNNP 658
SRGVAFV+F EH+HALVALRVLNNNP
Sbjct: 656 SRGVAFVDFQEHEHALVALRVLNNNP 681
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + N+P+ K +++ +FS VG V ++ + S+GF FV+F +DAE +IQ+
Sbjct: 29 VFVSNLPYTFKSADLEAVFSEVGPVRRCFMVAPKGSETSRGFGFVQFATVKDAERSIQQK 88
Query: 279 NGQKFGKRPIAVDWAV 294
+G R I V A
Sbjct: 89 DGFSVAGRKIRVKLAT 104
>gi|218194012|gb|EEC76439.1| hypothetical protein OsI_14130 [Oryza sativa Indica Group]
Length = 878
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 322/679 (47%), Positives = 414/679 (60%), Gaps = 83/679 (12%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
MV KGS RGFG+VQFA ++DA R+++ K+G SV GRKI VK A H R+ +
Sbjct: 58 MVAPKGSETSRGFGFVQFATVQDAERSIQQKDGFSVAGRKIRVKLATH-------RAPLK 110
Query: 61 QEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQRV 120
+ +Q + E M KD ++ K + E+ D ++ED +
Sbjct: 111 ERLQKK--ENAMQAKDADVTNEAKDADATNEAQDA-----------DATNEEDDTS---- 153
Query: 121 ARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVLYT 180
A E H+ + GL ++GC DA+AVL+
Sbjct: 154 ----------TAKHKETSHK--------------------KDAGLERDGCTTDAAAVLFA 183
Query: 181 TVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPV 240
+V SA SV LH+KE+KG VWARQLGGEGSK +KW++I+RN+PFK V EI DMFS
Sbjct: 184 SVTSAWDSVVHLHRKEVKGAVVWARQLGGEGSKIRKWRVIVRNLPFKITVKEIMDMFSLA 243
Query: 241 GLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYS 300
G VW+V IP +D G SKGFAFV FT K+DAE+AI+ NG+ KR +AVDWAVPK +Y+
Sbjct: 244 GFVWDVSIPQKSDNGTSKGFAFVSFTRKQDAENAIKNVNGKVVAKRTVAVDWAVPKKVYT 303
Query: 301 SGGAAAGVQ-----NKGDGNSDSGSDDDL-GDDDAETASDDSNSSEKEDLPSNADFDEEV 354
A + + N D SD S+D+L G+DD+ E + P++ DF+ E+
Sbjct: 304 VAAAKSSSKDDELVNVSDKGSDEESEDNLVGEDDSYELD-----QEASNRPADDDFETEI 358
Query: 355 DIARKVL-NKLTSTTGSLPSLSDDSAL-VKGNKEQDS----DKTVNESAKVSDVSKLNSS 408
DI+RKVL N + S+ + PS ++ S + EQD+ K + A V KL +S
Sbjct: 359 DISRKVLENLIKSSEKAEPSGNEGSDVDTDTETEQDTSEKKQKQTHLPASVPAADKLENS 418
Query: 409 K---------SKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVL 459
K K KQ G L TIFI NLPFDL NEEV +RFSAFG+V SF PVL
Sbjct: 419 KRVAEEENTLPASKFKKQDAG---LDRTIFISNLPFDLSNEEVTERFSAFGKVESFFPVL 475
Query: 460 HQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEID 519
H++TKRP+GTGFLKF T EAA AAVSA+ GLGIF+K R L ++KALDK+ AH KE++
Sbjct: 476 HKLTKRPRGTGFLKFSTAEAADAAVSAANAAPGLGIFIKSRALKIMKALDKESAHKKELE 535
Query: 520 KSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTR 579
KSKNE D RNLYL KEG IL GTPAAEGVSD DM+KR L +K LQSP FHVSRTR
Sbjct: 536 KSKNEVEDRRNLYLTKEGEILAGTPAAEGVSDADMNKRSWLARRKAEMLQSPKFHVSRTR 595
Query: 580 LVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFV 639
L+IYNLPK+MT +KKLC +AV+SRA KQ P+I+++ L++ KK + +SRGVAFV
Sbjct: 596 LIIYNLPKTMTINDVKKLCREAVISRAHKQNPIIRKVNILKNEKKSNSTAQKHSRGVAFV 655
Query: 640 EFTEHQHALVALRVLNNNP 658
+F EH+HALVALRVLNNNP
Sbjct: 656 DFQEHEHALVALRVLNNNP 674
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + N+P+ K +++ +FS VG V ++ + S+GF FV+F +DAE +IQ+
Sbjct: 29 VFVSNLPYTFKSADLEAVFSEVGPVRRCFMVAPKGSETSRGFGFVQFATVQDAERSIQQK 88
Query: 279 NGQKFGKRPIAVDWAV 294
+G R I V A
Sbjct: 89 DGFSVAGRKIRVKLAT 104
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
+T+F+ NLP+ + +++ FS G V V + ++ +G GF++F TV+ A ++
Sbjct: 27 STVFVSNLPYTFKSADLEAVFSEVGPVRRCFMVAPKGSETSRGFGFVQFATVQDAERSIQ 86
Query: 486 ASKTTSGLGIFLKGRQLTV 504
G + GR++ V
Sbjct: 87 QKD-----GFSVAGRKIRV 100
>gi|297601916|ref|NP_001051750.2| Os03g0824300 [Oryza sativa Japonica Group]
gi|255675014|dbj|BAF13664.2| Os03g0824300 [Oryza sativa Japonica Group]
Length = 864
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 316/686 (46%), Positives = 398/686 (58%), Gaps = 111/686 (16%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
MV KGS RGFG+VQ KI VK A HRA L++R K
Sbjct: 58 MVAPKGSETSRGFGFVQL---------------------KIRVKLATHRAPLKERLQKK- 95
Query: 61 QEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQRV 120
E M KD ++ K + E+ D ++ED +
Sbjct: 96 --------ENAMQAKDADVTNEAKDADSTNEAQDA-----------DATNEEDDTS---- 132
Query: 121 ARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVLYT 180
A E H+ + GL ++GC DA+AVL+
Sbjct: 133 ----------TAKHKETSHK--------------------KDAGLERDGCTTDAAAVLFA 162
Query: 181 TVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPV 240
+V SA SV LH+KE+KG VWARQLGGEGSK +KW++I+RN+PFK V EI DMFS
Sbjct: 163 SVTSAWDSVVHLHRKEVKGAVVWARQLGGEGSKIRKWRVIVRNLPFKITVKEIMDMFSLA 222
Query: 241 GLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAE-------SAIQKFNGQKFGKRPIAVDWA 293
G VW+V IP +D G SKGFAFV FT K+DAE SAI+ NG+ KR +AVDWA
Sbjct: 223 GFVWDVSIPQKSDNGTSKGFAFVSFTRKQDAENVWSVPCSAIKNVNGKVVAKRTVAVDWA 282
Query: 294 VPKNIYSSGGAAAGVQ-----NKGDGNSDSGSDDDL-GDDDAETASDDSNSSEKEDLPSN 347
VPK +Y+ A + + N D SD S+D+L G+DD+ E + P++
Sbjct: 283 VPKKVYTVAAAKSSAKDDELVNVSDKGSDEESEDNLVGEDDSYELD-----QEASNRPAD 337
Query: 348 ADFDEEVDIARKVL-NKLTSTTGSLPSLSDDSAL-VKGNKEQDS----DKTVNESAKVSD 401
DF+ E+DI+RKVL N + S+ + PS ++ S + EQD+ K + A V
Sbjct: 338 DDFETEIDISRKVLENLIKSSEKAEPSGNEGSDVDTDTETEQDTSEKKQKQTHLPASVPA 397
Query: 402 VSKLNSSK---------SKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEV 452
KL +SK K KQ G L TIFICNLPFDL NEEV +RFSAFG+V
Sbjct: 398 ADKLENSKRVAEEENTLPASKFKKQDAG---LDRTIFICNLPFDLSNEEVTERFSAFGKV 454
Query: 453 VSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKL 512
SF PVLH++TKRP+GTGFLKF T EAA AAVSA+ GLGIF+K R L ++KALDK+
Sbjct: 455 ESFFPVLHKLTKRPRGTGFLKFSTAEAADAAVSAANAAPGLGIFIKSRALKIMKALDKES 514
Query: 513 AHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPN 572
AH KE++KSKNE D RNLYL KEG IL GTPAAEGVSD DM+KR L +K LQSP
Sbjct: 515 AHKKELEKSKNEVEDRRNLYLTKEGEILAGTPAAEGVSDADMNKRSWLARRKAEMLQSPK 574
Query: 573 FHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHY 632
FHVSRTRL+IYNLPK+MT +KKLC +AV+SRA KQ P+I+++ L++ KK + +
Sbjct: 575 FHVSRTRLIIYNLPKTMTINDVKKLCREAVISRAHKQNPIIRKVNILKNEKKSNSTAQKH 634
Query: 633 SRGVAFVEFTEHQHALVALRVLNNNP 658
SRGVAFV+F EH+HALVALRVLNNNP
Sbjct: 635 SRGVAFVDFQEHEHALVALRVLNNNP 660
>gi|168068037|ref|XP_001785903.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662429|gb|EDQ49286.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 780
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 298/715 (41%), Positives = 416/715 (58%), Gaps = 63/715 (8%)
Query: 2 VTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVTQ 61
V +KGS HRGFG+V FAV EDA RAVE KNG ++ GRKI V+ A RA L+ R K +
Sbjct: 61 VKQKGSERHRGFGFVNFAVKEDAIRAVETKNGAALQGRKIKVELAKRRAPLDARHPKGKR 120
Query: 62 EVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAA-----------------TL 104
+ D E T +++ V + + + K +K RK + T
Sbjct: 121 K----DAEGTKEDEKNVEGDS---MAAMAPEDKGIKKRKVSDGEDLELSHGTAVESKLTN 173
Query: 105 GIDLADKED----------CSQKQRVARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYP 154
G A K D S+ QR ARTVIIG L N M + A +G V V +P
Sbjct: 174 GRQPAVKPDSKKRPREEGKASESQRTARTVIIGCLENPKMVQAAIAKAKRLGKVEDVRHP 233
Query: 155 LPKEELEQHGLAQEGCKMDASAVLYTTVKSACASVALLHQKEIKGG-TVWARQLGGE--- 210
+P+ EL GLA++GCK +A V YT+VK A +V LH++ + GG +WARQLGGE
Sbjct: 234 VPEAELISRGLAKDGCKQEAVEVRYTSVKVAHQAVTALHKQNVGGGGAIWARQLGGEILI 293
Query: 211 ----------GSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGF 260
G+K +KW+LI+RN+PF K ++ +FSP+G VW V IP D SKGF
Sbjct: 294 IFVAIMSVLQGAKLKKWRLIVRNLPFMLKEQTLRQLFSPLGFVWEVTIPRKPDNS-SKGF 352
Query: 261 AFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGS 320
AFV FTCK DAE AIQ NG KRPIAVDWAV K Y + + V + D S
Sbjct: 353 AFVGFTCKADAEKAIQTVNGTLVSKRPIAVDWAVAKKEYETAASKTSVPGIHLLDIDIES 412
Query: 321 DDDLGDDDAETASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLS---DD 377
D+ DD + + + +KE + DF EE D+A+++L K+T+++ + + D
Sbjct: 413 SDEEDVDDEDDDEGEESEKDKEQV---IDFSEEKDLAKRILKKVTASSKTKEQDNVQLTD 469
Query: 378 SALVKGN---KEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDE-LQNTIFICNL 433
S + G K++ S K + K + K+ + K ++ +D+ L T+F+ NL
Sbjct: 470 SLEIGGKQTAKQKSSAKETKPAVKETKTPKVADTVKNAKKVELAASQDDGLSRTVFVRNL 529
Query: 434 PFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA-SKTTSG 492
P + + ++++++FS FGEV +F VLH +TKRPKGT F++F T E A A++A S+T +
Sbjct: 530 PLEANVQDLRRQFSDFGEVKAFRLVLHPITKRPKGTAFVEFVTAEGAQEAIAAASRTEAD 589
Query: 493 LGIFLKGRQLTVLKALDKKLAHD--KEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVS 550
G+ + GR + + ALD+ A +E+ K +++ +D R+L LAKEG++ EGTPAA+G+S
Sbjct: 590 GGLVVGGRNIIMNLALDRDKAKQVARELSKEQDD-HDRRHLKLAKEGVVEEGTPAAQGLS 648
Query: 551 DDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQK 610
D+ KR+ + +K TKL+SPNFHVS TRL ++N+PK MTEK LK+L I AV S+ASKQ
Sbjct: 649 KGDLMKRKQVEHEKATKLRSPNFHVSTTRLAVHNIPKDMTEKELKQLFIQAVKSKASKQN 708
Query: 611 PVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPSKLFYHH 665
P +KQ+K L+ KG + SRG AFVEFTEHQHALVALRVLNNNP H
Sbjct: 709 PALKQVKILRDEVKGVPGSSGKSRGAAFVEFTEHQHALVALRVLNNNPETFGSEH 763
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%)
Query: 209 GEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCK 268
G G + + +R++P+ +++ F VG V N + + +GF FV F K
Sbjct: 21 GSGDDIDERTVFVRSLPYTLTDAQLEAYFGEVGPVRNCFTVKQKGSERHRGFGFVNFAVK 80
Query: 269 RDAESAIQKFNGQKFGKRPIAVDWA 293
DA A++ NG R I V+ A
Sbjct: 81 EDAIRAVETKNGAALQGRKIKVELA 105
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 420 GEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEA 479
G+D + T+F+ +LP+ L + +++ F G V + V + ++R +G GF+ F E
Sbjct: 23 GDDIDERTVFVRSLPYTLTDAQLEAYFGEVGPVRNCFTVKQKGSERHRGFGFVNFAVKED 82
Query: 480 ATAAVSASKTTSGLGIFLKGRQLTV 504
A AV G L+GR++ V
Sbjct: 83 AIRAVETKN-----GAALQGRKIKV 102
>gi|302795221|ref|XP_002979374.1| hypothetical protein SELMODRAFT_419047 [Selaginella moellendorffii]
gi|300153142|gb|EFJ19782.1| hypothetical protein SELMODRAFT_419047 [Selaginella moellendorffii]
Length = 875
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 274/674 (40%), Positives = 378/674 (56%), Gaps = 78/674 (11%)
Query: 19 AVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSK--------VTQEVQAEDIEK 70
A+ EDA RAV KN +S+ GR+I V+ A R SL +RR K QE AE
Sbjct: 33 AIAEDAQRAVASKNDSSMEGRRIKVEVARKRPSLNERRKKRQGGTTEAAGQENAAEAANN 92
Query: 71 TMDN-------KDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDC-SQKQRVAR 122
T+ N VI+ EK +S K ++ + + ++ S+KQR AR
Sbjct: 93 TVQNGGEKEPETPAVINEEEKPKQGTAKSHAKAKCKRTSQVQETTDSSQNAASEKQRPAR 152
Query: 123 TVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVLYTTV 182
TV+IG L +++ AE V LA +GTV SV L + + QHGL+++GCK+ A+A+++T+V
Sbjct: 153 TVVIGNLGDSETAEAVLTLAKKLGTVESVEKSLSEAYINQHGLSRDGCKLPAAAIVFTSV 212
Query: 183 KSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGL 242
+A +VA H +++ WARQLGGEGSK +KW+LI+RN+PFK +K+ FS G
Sbjct: 213 TAARQAVATYHLQKLGNEVFWARQLGGEGSKLKKWRLIVRNLPFKVTDAMLKEKFSAAGF 272
Query: 243 VWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSG 302
VW +P N D G SKGFAF+ +TCK DAE AI+ NG K R IAVDWAV K Y +
Sbjct: 273 VWETTVPRNPD-GRSKGFAFIGYTCKNDAEKAIKALNGTKIANRTIAVDWAVAKMTYEN- 330
Query: 303 GAAAGVQNKGDGNSDSGSDDDLGDDDAETASDD-------------SNSSEKEDLPSNAD 349
+ +K + + + DL D ETAS+ E++D
Sbjct: 331 -----IVHKSE--EEKAENSDL---DNETASESDGIVSDEEEDEEDEEDDEEDDEEEEKP 380
Query: 350 FDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTVNESAKVSDVSKLNSSK 409
DE+ ++ KVL+K+ + G K+ D D+ S + +S+
Sbjct: 381 LDEK-NLVSKVLSKVVTEPGKA-------------KDGDEDRK----------SPMAASR 416
Query: 410 S--KPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPK 467
KP + K E E+ ++ T+F+ NLP D ++K++FS FG+V S VLH TK+PK
Sbjct: 417 EVKKPLAAKPPE-ENSMERTLFVRNLPPDAKVHDLKKKFSEFGDVTSLRLVLHPATKKPK 475
Query: 468 GTGFLKFKTVEAATAAVSASKTT-SGLGIF-LKGRQLTVLKALDKKLAHDKEIDKSKNET 525
GT F++F T EAA A A+K G F + G+ A+D+ A + KS E
Sbjct: 476 GTAFVEFATREAAEALARATKNAEEGNSSFSIAGKYPIAHFAVDRDAAREISTKKSIEER 535
Query: 526 N-DHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYN 584
+ D RNL+L KEG I GT AA GVS D+ KR L +K TKL+SPNFHVS+TRL I+N
Sbjct: 536 DHDKRNLHLLKEGYIQPGTEAAHGVSKSDLLKRSALQTEKATKLRSPNFHVSKTRLAIHN 595
Query: 585 LPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEH 644
P++++EK +K+L +AVVSRA KQ+PVIKQ+K L D K SRG FVEF EH
Sbjct: 596 FPRTLSEKDVKQLFTNAVVSRARKQRPVIKQVKLL-------TDDKENSRGTGFVEFAEH 648
Query: 645 QHALVALRVLNNNP 658
QHA+VALRVLNNNP
Sbjct: 649 QHAIVALRVLNNNP 662
>gi|413932769|gb|AFW67320.1| hypothetical protein ZEAMMB73_365171 [Zea mays]
Length = 376
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 173/325 (53%), Positives = 220/325 (67%), Gaps = 21/325 (6%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
MV +KGS + RGFG+VQFA ++DA+RA++ KNG+ V GRKI VK AM+RA L++R K
Sbjct: 58 MVAEKGSEKSRGFGFVQFATVQDADRALQQKNGSPVAGRKIRVKLAMNRAPLKERLQKGN 117
Query: 61 QEVQAEDIEKTMDNKDGVISGAEKHSSK----------LLESGKTVKPRKAATLGIDLAD 110
+V+ D + D IS AEKH K LL + V K A +G ++
Sbjct: 118 MQVKDSDAKDEADE----ISPAEKHKGKSHKTDPEQLHLLSNDAKVS--KEAPIGD--SE 169
Query: 111 KEDCSQKQRVARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGC 170
K S+KQRVA+TVI GGL ++ MA EV R A IG+V SV YPLPKEE+ +GLA++GC
Sbjct: 170 KVKNSEKQRVAKTVIFGGLQDSAMATEVFRQAREIGSVVSVNYPLPKEEMRFNGLARDGC 229
Query: 171 KMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKV 230
D +AVL+ +VKSA SV LH KE+KG TVWARQLGGEGSK +KW+ I+RN+PFK
Sbjct: 230 TSDMAAVLFASVKSAWDSVVQLHNKEVKGATVWARQLGGEGSKIRKWRAIVRNLPFKITE 289
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAV 290
EI DMFS G VW+V IPH +D G+SKGFAFV FT K+DAE+AI+ NG+ KRP+AV
Sbjct: 290 KEIVDMFSSAGFVWDVTIPHKSDEGISKGFAFVSFTRKQDAENAIKNINGKDVAKRPVAV 349
Query: 291 DWAVPKNIYSSGGAAAGVQNKGDGN 315
DWAVPK +Y+ AA V K +GN
Sbjct: 350 DWAVPKKVYT---VAAKVDAKDNGN 371
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + N+P+ K ++++ +FS VG V ++ + S+GF FV+F +DA+ A+Q+
Sbjct: 29 VFVSNLPYTFKSSDLEAVFSEVGPVRRCFMVAEKGSEKSRGFGFVQFATVQDADRALQQK 88
Query: 279 NGQKFGKRPIAVDWAV 294
NG R I V A+
Sbjct: 89 NGSPVAGRKIRVKLAM 104
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
+T+F+ NLP+ + +++ FS G V V + +++ +G GF++F TV+ A A+
Sbjct: 27 STVFVSNLPYTFKSSDLEAVFSEVGPVRRCFMVAEKGSEKSRGFGFVQFATVQDADRALQ 86
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDK 510
G + GR++ V A+++
Sbjct: 87 QKN-----GSPVAGRKIRVKLAMNR 106
>gi|384253917|gb|EIE27391.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 992
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 228/715 (31%), Positives = 363/715 (50%), Gaps = 67/715 (9%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHR----------- 49
+ K H+G G+V FA+ EDA RAV+ +G +GGR I + A+ +
Sbjct: 40 FLLKGAGKHHKGCGFVTFALQEDAQRAVQELSGKKLGGRTIQARTALTQTHFIIPTNQPN 99
Query: 50 --------ASLEQRRSKVTQEVQAE--DIEKTMDNKDGVISGAEKHSSKLLESGKTVKPR 99
A + ++ K T++ A D E + + KPR
Sbjct: 100 QPHLQAPFAERKDKKRKRTEDAPARPGDAEAATAAVTAPQQPSPAAEAAAASPAAERKPR 159
Query: 100 KAATLGIDLADKE----DCSQKQRVARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPL 155
K+ + E + K + RTV +G L+A ++ AGS SV P
Sbjct: 160 KSKKQRVGQKSGEAKPAGDNAKHALVRTVALGN-LSAGNRDQALAYAGSDTAAHSVVQP- 217
Query: 156 PKEELEQHGLAQEGCKMDASAVLYTTVKSACASVALLHQKEIK----------------- 198
+ +L+ H L ++GC D ++Y+TVK A A+V LH ++
Sbjct: 218 SQADLDSHVLQRDGCAGDVVFLVYSTVKDALAAVEKLHNHVLQDGDGGGTGPRGKKSKAG 277
Query: 199 ---GGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTG 255
G +WARQ+ GEG+ +KW+LI+RN+PF K +++++ +P G VW + +P N D G
Sbjct: 278 ASSGTLLWARQVSGEGAHLKKWRLILRNLPFNVKEVDLRELLAPAGFVWELTVPRNPD-G 336
Query: 256 LSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGN 315
++GF F F C+ AE AI+ N + G R IAVDWAVPK + S A G+GN
Sbjct: 337 KARGFGFAGFMCRAHAERAIKLANAKMVGGRTIAVDWAVPKAQFQSNTPAEAP--AGEGN 394
Query: 316 SDSGSDDDLGDDDAETASDDSNSSEKEDLPSN-ADFDEEVDIARKVLNKL---TSTTGSL 371
D+ ++ + DD+ +TA ++ SE+ED +N + ++E + R VL+++
Sbjct: 395 -DALAEGSISDDEGDTAGEEEPVSEQEDEGANDLELEDEKKLLRNVLSQIDDGDEDEAPQ 453
Query: 372 PSLSDDSALVKGNKEQDSD----KTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNT 427
P+ K ++ +D + + A ++ L + + Q +G E+Q T
Sbjct: 454 PAAKAGKKAAKEKQKPQADLPEAQATPQDAAADEI--LAGAARGEAAAPQHKG--EVQAT 509
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFK---TVEAATAAV 484
+F+ LP D+ E+ +R S FG++ + V + TK+ KGT F++F+ +AA A
Sbjct: 510 VFVRGLPLDVLQYELHERLSRFGKLKACRLVQDKGTKKLKGTAFVEFEQQADAQAAADAC 569
Query: 485 SASKTTSGLGIFLKGRQLTVLKALDKKLAHD-KEIDKSKNETNDHRNLYLAKEGLILEGT 543
+ +++ G + ++G + V AL + A K++ D+RNLYL KEG I EG+
Sbjct: 570 AKARSGQGAALAVRGSPIEVDLALTQDDARQLAGASKAQPGGKDNRNLYLLKEGQIEEGS 629
Query: 544 PAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVV 603
PA + +S D +KR+ + TKL+SPN+ +SRTRL + NLP ++EKGLK L + AV
Sbjct: 630 PAWQAMSTADRAKRKRAAAEARTKLKSPNYFLSRTRLCLRNLPPKLSEKGLKDLVLAAVK 689
Query: 604 SRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
RA+K +P +KQ+K L+ K D + S+G+ FVE EH+HAL ALR LNNNP
Sbjct: 690 ERAAKAQPTVKQVKILRDADKAGTDGQAASKGLGFVELVEHEHALCALRQLNNNP 744
>gi|417404448|gb|JAA48976.1| Putative nucleolar protein fibrillarin nop77 rrm superfamily
[Desmodus rotundus]
Length = 763
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 157/463 (33%), Positives = 235/463 (50%), Gaps = 29/463 (6%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+LIIRN+ FK +++K +F+ G V V IP D G +GFAFV+F +A A++
Sbjct: 115 RLIIRNLSFKCSEDDLKTIFAQYGAVLEVNIPRKPD-GKMRGFAFVQFKNLLEAGKALKS 173
Query: 278 FNGQKFGKRPIAVDWAVPKNIY--SSGGAAAGVQNKGD------GNSDSGSDDDLGDDDA 329
N ++ R IAVDWAV K+ Y + +A G +N+ + G + ++ G++D
Sbjct: 174 MNMKEIKGRTIAVDWAVAKDKYKNTQSASAPGEENRPEPKHQKLGKENGRKEEGRGEEDG 233
Query: 330 ETASDDSNSSEKEDLPSNAD------------FDEEVDIARKVLNKLTSTTGSLPSLSDD 377
+ + E+ + D + V I ++ + S SD+
Sbjct: 234 DDDGHMEEEEDDEEEEDDDDGDEEEEKNKESKVAKPVQIQKRAAKRAAPAESSEEDQSDE 293
Query: 378 SALVKGNKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDL 437
+ ++G + K + + SK K + L E + T+FI NL FD
Sbjct: 294 DSDLEGGASGEELAQSETDTKGQEDGGVQVSKKKKRKLPSDVNEGK---TVFIRNLSFDS 350
Query: 438 DNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA-SKTTSGLGIF 496
+ E++ + FG++ VLH T+ KG F +F T AA ++A S T G G+
Sbjct: 351 EEEDLGELLQQFGDLKYVRIVLHPDTEHSKGCAFAQFMTQGAAQKCLAAASPETEGGGLK 410
Query: 497 LKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSK 556
L GRQL V A+ + A K K T RNLYLA+EGLI GT AAEGVS DM+K
Sbjct: 411 LDGRQLKVDLAVTRDEAAKLRTKKVKKPTGT-RNLYLAREGLIRAGTKAAEGVSTADMAK 469
Query: 557 RQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQI 616
R+ K KL+ N VSRTRL ++NLPK++ +K L+KL ++A + IK+
Sbjct: 470 RERFELLKHQKLKDQNIFVSRTRLCLHNLPKAVDDKRLRKLLLNATRGEKGVR---IKEC 526
Query: 617 KFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPS 659
+ ++ L+ +TK S G AFVEF EH+HAL ALR +NNNP+
Sbjct: 527 RVMRDLRGVHGNTKGQSLGYAFVEFQEHEHALTALRHINNNPA 569
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV 43
+VT+KGS RGFGYV F++ ED RA +K T+ G KI V
Sbjct: 35 VVTEKGSKACRGFGYVTFSMPEDVQRA--LKEVTTFEGSKINV 75
>gi|431911731|gb|ELK13879.1| RNA-binding protein 28 [Pteropus alecto]
Length = 758
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 156/457 (34%), Positives = 236/457 (51%), Gaps = 21/457 (4%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+LIIRN+ FK +++K +F+ G V V IP D G +GFAFV+F +A A++
Sbjct: 112 RLIIRNLSFKCSEDDLKTVFAQYGAVLEVNIPKKPD-GKMRGFAFVQFKNLLEAGKALKS 170
Query: 278 FNGQKFGKRPIAVDWAVPKNIY--SSGGAAAGVQNKGD------GNSDSGSDDDLGDDDA 329
N ++ R +AVDWAV K+ Y + +A GV+ + + G + ++++G++D
Sbjct: 171 MNMKEIKGRTVAVDWAVAKDKYKNTPSASAPGVEKRPEPKHQKLGKENGRKEENMGEEDD 230
Query: 330 ETASDDSNSSEKEDLPS-------NADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVK 382
+ E D + V I ++ + + S LSD+ + +
Sbjct: 231 GDDDLEEEEEEDGDDGDEEEEENKESKVTRPVHIQKRAIKRAAPAESSEEDLSDEDSDTE 290
Query: 383 GNKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEV 442
G DS + + +S ++ + + K ++ + T+FI NL FD + E++
Sbjct: 291 GRDSVDSGEELAQSDTDTEGQEDEDEQISKKKKRKLPSDVNEGKTVFIRNLSFDSEEEDL 350
Query: 443 KQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV-SASKTTSGLGIFLKGRQ 501
+ FG++ VLH T+ KG F +F T EAA + +AS T G G+ L GRQ
Sbjct: 351 GELLQQFGDLKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLEAASPETEGGGLKLDGRQ 410
Query: 502 LTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLH 561
L V A+ + A K K T RNLYLA+EGLI GT AAEGVS DM+KR+
Sbjct: 411 LKVDLAVTRDEAAKLRTKKVKKPTGT-RNLYLAREGLIRAGTKAAEGVSAADMAKRERFE 469
Query: 562 EKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQS 621
K KL+ N VSRTRL ++NLPK++ + L+KL ++A SR K IK+ + ++
Sbjct: 470 LLKHQKLKDQNIFVSRTRLCLHNLPKAVDDTQLRKLLLNA--SRGEK-GVRIKECRVMRD 526
Query: 622 LKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
L+ K S G AF EF EH+HAL ALR +NNNP
Sbjct: 527 LRGVHGKIKGQSLGYAFAEFQEHEHALRALRHINNNP 563
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV 43
+VT+KGS RGFGYV F+++ED RA +K T+ G KI V
Sbjct: 35 VVTEKGSKACRGFGYVTFSMLEDVQRA--LKEITTFEGCKINV 75
>gi|354470657|ref|XP_003497561.1| PREDICTED: RNA-binding protein 28 isoform 2 [Cricetulus griseus]
Length = 746
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 156/446 (34%), Positives = 229/446 (51%), Gaps = 13/446 (2%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+LIIRN+ FK +++K F+P G V V IP D G +GFAFV+F +A A++
Sbjct: 115 RLIIRNLSFKCSEDDLKTAFTPYGTVLEVNIPRKPD-GKMRGFAFVQFKNLLEAGKALKG 173
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDG---NSDSGSDDDLGDDDAETASD 334
N ++ R +AVDWAV K+ Y A+ + K + DSG + ++ E +
Sbjct: 174 MNMKEIKGRTVAVDWAVAKDKYKDTQPASAPEVKSSSEREHKDSGKKNGRVEEQEEEEEE 233
Query: 335 DSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSD-DSALVKGNKEQDSDKTV 393
+ + +D + V I ++ + + SD DS L +G
Sbjct: 234 EEEDDDDDDDDDKESRESTVKIQKRAVKRAAPEESIEEDHSDEDSDLEEGGSVDGEGVQS 293
Query: 394 NESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVV 453
SA+ + SK K + L E + T+FI NL F+ + E++ + FG++
Sbjct: 294 GSSAEEQEDEDAPVSKKKKRKLPSDVNEGK---TVFIRNLSFESEEEDLGEVLQQFGDLK 350
Query: 454 SFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA-SKTTSGLGIFLKGRQLTVLKALDKKL 512
VLH T+ KG GF +F T EAA ++A S G G+ L GR L + A+ +
Sbjct: 351 YVRIVLHPDTEHSKGCGFAQFMTQEAAQKCLAAASPEAEGGGLKLDGRLLKIDLAVTRDE 410
Query: 513 AHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPN 572
A + K K T RNLYLA+EGLI GT AAEGVS DM+KR+ K KL++ N
Sbjct: 411 AAKLQTKKVKKPTGT-RNLYLAREGLIRAGTKAAEGVSAADMAKRERFELLKHQKLKNQN 469
Query: 573 FHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHY 632
VS+TRL ++NLPK++ +K L+KL +DA + IK+ + ++ LK TK
Sbjct: 470 IFVSQTRLCLHNLPKAVDDKQLRKLLLDATRGEKGVR---IKECRVMRDLKAVHGKTKGQ 526
Query: 633 SRGVAFVEFTEHQHALVALRVLNNNP 658
S G AF EF +H+HAL ALR +NNNP
Sbjct: 527 SLGYAFAEFQKHEHALRALRHINNNP 552
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV 43
+VT+KGS RGFGYV F+++ED RA +K T+ G KI V
Sbjct: 35 VVTEKGSKACRGFGYVTFSMLEDVQRA--LKEITTFEGCKINV 75
>gi|426227971|ref|XP_004008088.1| PREDICTED: RNA-binding protein 28 isoform 1 [Ovis aries]
Length = 749
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 155/445 (34%), Positives = 236/445 (53%), Gaps = 9/445 (2%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+LIIRN+ FK +++K +FS G + V IP D G +GFAFV+F +A A++
Sbjct: 115 RLIIRNLSFKCSEDDLKTVFSQFGTILEVNIPRKPD-GKMRGFAFVQFKNLLEAGKALKG 173
Query: 278 FNGQKFGKRPIAVDWAVPKNIY--SSGGAAAGVQNKGDG-NSDSGSDDDLGDDDAETASD 334
N ++ R +AVDWAV K+ Y + + G + + + + + G ++ ++D E +
Sbjct: 174 MNMKEIKGRTVAVDWAVAKDKYKNTQSTSVPGEEKRPEPEHQELGQENGREEEDMEEEEN 233
Query: 335 DSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTVN 394
S+ ++E+ + + V I ++ + K S SDD ++ D + +
Sbjct: 234 GSDYDDEEEEDKGSKLPKPVQIHKRAVKKPAPAESSDEEHSDDDGDLEERDSIDGGEDLA 293
Query: 395 ESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVS 454
+S S+ + K + ++ + T+FI NL FD + E++ + FG++
Sbjct: 294 QSDTSSEEQEEEEVSKKKRKKRKLPSDVNEGKTVFIRNLSFDSEEEDLGELLQQFGDLKY 353
Query: 455 FVPVLHQVTKRPKGTGFLKFKTVEAATAAV-SASKTTSGLGIFLKGRQLTVLKALDKKLA 513
VLH T+ KG F +F T EAA + +AS G G+ L GRQL V A+ + A
Sbjct: 354 VRIVLHPDTEHSKGCAFAQFMTQEAAQKCLEAASPEAEGGGLKLDGRQLKVDLAVTRDEA 413
Query: 514 HDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNF 573
K K T RNLYLA+EGLI GT AAEGVS DM+KR+ K KL+ N
Sbjct: 414 AKLRTKKVKKPTGT-RNLYLAREGLIRAGTKAAEGVSAADMAKRERFELLKHQKLKDQNI 472
Query: 574 HVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYS 633
VSRTRL ++NLPK++ +K L+KL ++A +R K IK+ + ++ LK K S
Sbjct: 473 FVSRTRLCLHNLPKAVDDKQLRKLLLNA--TRGEKV-VRIKECRVMRDLKGAYGKIKGQS 529
Query: 634 RGVAFVEFTEHQHALVALRVLNNNP 658
G AF EF EH+HALVALR +NNNP
Sbjct: 530 LGYAFAEFQEHEHALVALRHINNNP 554
Score = 45.8 bits (107), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 30/43 (69%), Gaps = 2/43 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV 43
+VT+KGS RGFGYV F+++ED RA +K T+ GRKI V
Sbjct: 35 VVTEKGSKACRGFGYVTFSMLEDVQRA--LKEITTFEGRKINV 75
>gi|301755236|ref|XP_002913467.1| PREDICTED: RNA-binding protein 28-like [Ailuropoda melanoleuca]
gi|281348807|gb|EFB24391.1| hypothetical protein PANDA_001275 [Ailuropoda melanoleuca]
Length = 751
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 158/459 (34%), Positives = 232/459 (50%), Gaps = 29/459 (6%)
Query: 215 QKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESA 274
+K +LIIRN+ FK +++K +F+ G V V IP D G +GFAFV+F +A A
Sbjct: 112 KKARLIIRNLSFKCSEDDLKTVFAQYGAVLEVNIPRKPD-GKMRGFAFVQFKNLLEAGKA 170
Query: 275 IQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASD 334
++ N ++ R +AVDWAV K+ Y + +A+ G+ +LG ++ D
Sbjct: 171 LKSMNMKEIKGRTVAVDWAVAKDKYKNTQSASA---PGEEKRPEPKHQELGKENGREEED 227
Query: 335 DSNSSEKEDLPS--------NADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVK---- 382
E + + + I ++ + + T S DD + ++
Sbjct: 228 TEEEEEDDTEEEEEEGEEGKESRVTKPAQIQKRAVQRATPAESSEEEHCDDDSDLEEGDS 287
Query: 383 --GNKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNE 440
G +E T +E + DV SK K + L E + T+FI NL FD + E
Sbjct: 288 LDGGEELAQSDTSSEEQEDEDV---QVSKKKKRKLPSDVNEGK---TVFIRNLSFDSEEE 341
Query: 441 EVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV-SASKTTSGLGIFLKG 499
E+ + FG++ VLH T+ KG F +F T EAA + +AS T G G+ L G
Sbjct: 342 ELGELLQQFGDLKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLEAASPETEGGGLKLDG 401
Query: 500 RQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQM 559
RQL V A+ + A + K K T RNLYLA+EGLI GT AAEGVS DM+KR+
Sbjct: 402 RQLRVDLAVTRDEAAKLQTKKVKKPTGT-RNLYLAREGLIRAGTKAAEGVSAADMAKRER 460
Query: 560 LHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFL 619
K KL+ N VS+TRL ++NLPK + +K L+KL ++A ++ +K+ + +
Sbjct: 461 FELLKHQKLKDQNIFVSQTRLCLHNLPKGVDDKKLRKLLLNAT---GGEKGVRLKECRVM 517
Query: 620 QSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
+ LK K S G AF EF EH+HAL ALR +NNNP
Sbjct: 518 RDLKGAHGKVKGQSLGYAFAEFQEHEHALTALRHINNNP 556
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV 43
+VT+KGS RGFGYV F+++ED RA +K T+ G KI V
Sbjct: 35 VVTEKGSKACRGFGYVTFSMLEDVQRA--LKEITTFEGCKITV 75
>gi|149706198|ref|XP_001502696.1| PREDICTED: RNA-binding protein 28 isoform 1 [Equus caballus]
Length = 768
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 163/476 (34%), Positives = 235/476 (49%), Gaps = 46/476 (9%)
Query: 215 QKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESA 274
+K +LIIRN+ FK +++K +F+ G V V IP D G +GFAFV+F +A A
Sbjct: 112 KKARLIIRNLSFKCSEDDLKTIFAQFGAVLEVNIPRKPD-GKMRGFAFVQFKNLLEAGKA 170
Query: 275 IQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASD 334
++ N ++ R +AVDWAV K+ Y + +A+ G+ D LG ++ +
Sbjct: 171 LKSMNMKEIKGRTVAVDWAVAKDKYKNTQSASA---PGEEKRPEPKDQKLGKENVREEEN 227
Query: 335 DSNSSEKEDLPSN-------------------------ADFDEEVDIARKVLNKLTSTTG 369
+E+E + + + V I ++ + + G
Sbjct: 228 VGEEAEEEGEDEDDMEEEEEEEEEEDEEDEEEEEENKESKVMKAVQIQKRAVKRAAPAEG 287
Query: 370 SLPSLSD------DSALVKGNKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDE 423
S SD D + +EQ T E + DV SK K + L E +
Sbjct: 288 SEEEHSDEDGDLEDGESIDSGEEQAQSDTNTEEQEDEDV---QVSKKKKRKLPPDVNEGK 344
Query: 424 LQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAA 483
T+FI NL FD + EE+ + FG++ VLH T+ KG F +F T EAA
Sbjct: 345 ---TVFIRNLSFDSEEEELGELLQQFGDLKYVCIVLHPDTEHSKGCAFAQFMTQEAAQKC 401
Query: 484 V-SASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEG 542
+ +AS T G G+ L GRQL V A+ + A + K K T RNLYLA+EGLI G
Sbjct: 402 LEAASPETEGGGLKLDGRQLKVDLAVTRDEAAKLQTKKVKKPTGT-RNLYLAREGLIRAG 460
Query: 543 TPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAV 602
T AAEGVS DM+KR+ K KL+ N VS+TRL ++NLPK++ +K L+KL ++A
Sbjct: 461 TKAAEGVSAADMAKRERFELLKHQKLKDQNIFVSQTRLCLHNLPKAVDDKQLRKLLLNAT 520
Query: 603 VSRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
+ IK+ + ++ LK K S G AF EF EH+HALVALR +NNNP
Sbjct: 521 RGERGVR---IKECRVMRDLKGVHGKIKGQSLGYAFAEFQEHEHALVALRHINNNP 573
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV 43
+VT+KGS RGFGYV F+++ED RA +K T+ G KI V
Sbjct: 35 VVTEKGSKACRGFGYVTFSMLEDVQRA--LKEVTTFEGCKINV 75
>gi|355715663|gb|AES05398.1| RNA binding motif protein 28 [Mustela putorius furo]
Length = 756
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 158/464 (34%), Positives = 233/464 (50%), Gaps = 34/464 (7%)
Query: 215 QKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESA 274
+K +LIIRN+ FK +++K +F+ G V V IP D G +GFAFV+F +A A
Sbjct: 112 KKARLIIRNLSFKCSEDDLKTVFAQYGAVLEVNIPRKPD-GKMRGFAFVQFKNLLEAGKA 170
Query: 275 IQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDA----- 329
++ N ++ R +AVDWAV K+ Y + +A+ G+ +LG ++
Sbjct: 171 LKSMNMKEIKGRTVAVDWAVAKDKYKNTQSASA---PGEEKRPEPKHQELGKENGSEEKD 227
Query: 330 --------ETASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSA-- 379
+ ++ + + + + +I ++ + + S LSDD +
Sbjct: 228 MEEEEGEEDDTEEEEDEEREREENEETRVTKPAEIQKRAVRRAAPGESSEEELSDDDSDL 287
Query: 380 ----LVKGNKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPF 435
+ G +E T +E + DV SK K + L E + T+FI NL F
Sbjct: 288 GERESIDGGEELAQSDTSSEEQEDEDV---QVSKKKKRKLPSDVNEGK---TVFIRNLSF 341
Query: 436 DLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV-SASKTTSGLG 494
D + EE+ + FG++ VLH T+ KG F +F T EAA + +AS T G G
Sbjct: 342 DSEEEELGELLQQFGDLKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLEAASPETEGGG 401
Query: 495 IFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDM 554
+ L GRQL V A+ + A + K K T RNLYLA+EGLI GT AAEGVS DM
Sbjct: 402 LKLDGRQLRVDLAVTRDEAAKLQTKKVKKPTGT-RNLYLAREGLIRAGTKAAEGVSAADM 460
Query: 555 SKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIK 614
+KR+ K KL+ N VS TRL ++NLPKS+ +K L+KL + A + +K
Sbjct: 461 AKRERFELLKHQKLKDQNIFVSLTRLCLHNLPKSVDDKELRKLLLSATRGEKGVR---LK 517
Query: 615 QIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
+ + ++ LK K S G AF EF EH+HAL ALR +NNNP
Sbjct: 518 ECRVMRDLKGALGKVKGQSLGYAFAEFQEHEHALTALRHINNNP 561
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV 43
+VT+KGS RGFGYV F+++ED RA +K T+ G KI V
Sbjct: 35 VVTEKGSKACRGFGYVTFSMLEDVQRA--LKEITTFEGCKINV 75
>gi|344242066|gb|EGV98169.1| RNA-binding protein 28 [Cricetulus griseus]
Length = 778
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 152/451 (33%), Positives = 233/451 (51%), Gaps = 18/451 (3%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+LIIRN+ FK +++K F+P G V V IP D G +GFAFV+F +A A++
Sbjct: 115 RLIIRNLSFKCSEDDLKTAFTPYGTVLEVNIPRKPD-GKMRGFAFVQFKNLLEAGKALKG 173
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDDSN 337
N ++ R +AVDWAV K+ Y A+ G S D G + +
Sbjct: 174 MNMKEIKGRTVAVDWAVAKDKYKDTQPASAPD--GKNVSSEREHKDSGKKNGRVEEQEEE 231
Query: 338 SSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSD------- 390
E+E+ + D D+ ++ +++ ++ + + ++ + + ++DSD
Sbjct: 232 EEEEEEDDDDDDDDDITYVSGQMMRSELCRCRAVKRAAPEESIEEDHSDEDSDLEEGGSV 291
Query: 391 --KTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSA 448
+ V + + ++ SK K K +E T+FI NL F+ + E++ +
Sbjct: 292 DGEGVQSGSSAEEQEDEDAPVSKKKKRKLPSDVNE-GKTVFIRNLSFESEEEDLGEVLQQ 350
Query: 449 FGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA-SKTTSGLGIFLKGRQLTVLKA 507
FG++ VLH T+ KG GF +F T EAA ++A S G G+ L GR L + A
Sbjct: 351 FGDLKYVRIVLHPDTEHSKGCGFAQFMTQEAAQKCLAAASPEAEGGGLKLDGRLLKIDLA 410
Query: 508 LDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTK 567
+ + A + K K T RNLYLA+EGLI GT AAEGVS DM+KR+ K K
Sbjct: 411 VTRDEAAKLQTKKVKKPTGT-RNLYLAREGLIRAGTKAAEGVSAADMAKRERFELLKHQK 469
Query: 568 LQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKV 627
L++ N VS+TRL ++NLPK++ +K L+KL +DA + IK+ + ++ LK
Sbjct: 470 LKNQNIFVSQTRLCLHNLPKAVDDKQLRKLLLDATRGEKGVR---IKECRVMRDLKAVHG 526
Query: 628 DTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
TK S G AF EF +H+HAL ALR +NNNP
Sbjct: 527 KTKGQSLGYAFAEFQKHEHALRALRHINNNP 557
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV 43
+VT+KGS RGFGYV F+++ED RA +K T+ G KI V
Sbjct: 35 VVTEKGSKACRGFGYVTFSMLEDVQRA--LKEITTFEGCKINV 75
>gi|291391164|ref|XP_002712117.1| PREDICTED: RNA binding motif protein 28 isoform 2 [Oryctolagus
cuniculus]
Length = 755
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 157/457 (34%), Positives = 236/457 (51%), Gaps = 22/457 (4%)
Query: 215 QKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESA 274
+K +LIIRN+ FK +++K +F+ G V V +P D G +GFAFV+F +A A
Sbjct: 112 KKARLIIRNLSFKCSEDDLKTIFAQFGAVLEVNVPKKPD-GKMRGFAFVQFKNLLEAGKA 170
Query: 275 IQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNS----------DSGSDDDL 324
++ N ++ R +AVDWAV K+ Y A +G G G S SG ++
Sbjct: 171 LKGMNMKEIKGRTVAVDWAVAKDKYKDTQAVSG---PGKGKSCEPNLQESVKKSGRKEED 227
Query: 325 GDDDAETASDDSNSSEKEDLPSN-ADFDEEVDIARKVLNKLTSTTGSLPSLS-DDSALVK 382
+++ + D+ + ++++ + + + + ++ + K +T S S +DS L +
Sbjct: 228 VEEEDDDDDDEDDDDDEDEEEKEDSKVTKAMRVQKRAVKKTVATESSGDDASGEDSDLEE 287
Query: 383 GNKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEV 442
G++ + A + ++ SK K K E T+FI NL FD + E++
Sbjct: 288 GDRVGGGEDLAESDASAGEQEGEDAQVSKKKKRKLPSDVSE-GKTVFIRNLSFDSEEEDL 346
Query: 443 KQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA-SKTTSGLGIFLKGRQ 501
+ FG++ VLH T+ KG F +F T EAA ++A S G G+ L GRQ
Sbjct: 347 GELLQQFGDLKYVRIVLHPDTEHSKGCAFAQFTTQEAAQKCLAAASPEVEGGGLKLDGRQ 406
Query: 502 LTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLH 561
L V A+ + A K K T RNLYLA+EGLI GT AAEGVS DM+KR+
Sbjct: 407 LKVDLAVTRDEAAKLRTKKVKKPTGT-RNLYLAREGLIRAGTKAAEGVSAADMAKRERFE 465
Query: 562 EKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQS 621
K KL+ N VSRTRL ++NLPK++ + L+KL + A + IK+ + ++
Sbjct: 466 LLKHQKLKDQNIFVSRTRLCLHNLPKAVDDTQLRKLLLSATRGEKGVR---IKECRVMRD 522
Query: 622 LKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
LK K S G AFVEF EH+HAL ALR +NNNP
Sbjct: 523 LKGAHGAVKGQSLGYAFVEFQEHEHALGALRHINNNP 559
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV 43
+VT+KGS RGFGYV F++ ED RA +K T+ G KI V
Sbjct: 35 VVTEKGSKSCRGFGYVTFSMPEDVQRA--LKEITTFEGHKINV 75
>gi|383855732|ref|XP_003703364.1| PREDICTED: RNA-binding protein 28-like [Megachile rotundata]
Length = 747
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 152/457 (33%), Positives = 235/457 (51%), Gaps = 54/457 (11%)
Query: 205 RQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVK 264
R+L + ++ ++ ++I+RN+ F+ +KD FS G + V I +D G + G AF++
Sbjct: 177 RKLLKDKNRKKRARIIVRNLAFQVTEENLKDHFSQYGEIEEVKILKRSD-GKNVGCAFLQ 235
Query: 265 FTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDL 324
F + A AI N Q+ RPI VDWAV KN +S S+++
Sbjct: 236 FDHVQSAAKAIHYANLQELFDRPIVVDWAVAKNKFSKN-----------------SENET 278
Query: 325 GDDDAETASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGN 384
+ DS SE ED ++ +DI T + S SDDS V+
Sbjct: 279 NGEVKVKIEKDSEGSENED-------EKHIDIV----------TDAHNSDSDDSVEVEIK 321
Query: 385 KEQDSDKTVNESAKVSDVSKLNSSKSKPK--SLKQTEGEDELQNTIFICNLPFDLDNEEV 442
E ++D + +S++ D + +P+ S +EG+ TIF+ NLPF + NEE+
Sbjct: 322 SENENDASSQDSSE-DDEKEDTKEIKRPRYESHDVSEGK-----TIFLKNLPFSVKNEEL 375
Query: 443 KQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQL 502
K+ FG V + + +T+ KGT F+KFK VE A +SA G + ++ + L
Sbjct: 376 KKYMEQFGPVYYALVCMDPLTEYSKGTAFVKFKNVEDAEKCLSA-----GNELQMQDQVL 430
Query: 503 TVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHE 562
+ALDK +K K + D RNLYL KEG+IL G+PA+ GVS DM+KR + +
Sbjct: 431 EAQRALDKNEIENKANLKHQRHK-DSRNLYLVKEGVILAGSPASVGVSAADMAKRLQIEQ 489
Query: 563 KKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSL 622
K L++ N VSR RLVI+NLP ++ + KK +V+ S + VIK+++ ++ L
Sbjct: 490 WKSQILRNLNMFVSRVRLVIHNLPPTLNDVKFKK-----IVAEYSPRNAVIKEVRIMRDL 544
Query: 623 KKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPS 659
K ++ S+ FV FT H+ AL ALR +NNNP+
Sbjct: 545 KNVDMNGVGKSKEYGFVSFTRHEDALEALRNINNNPN 581
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 4/123 (3%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
++I+RN+PFKA +++ + P G + + P D G G F++F A AI
Sbjct: 44 RIIVRNVPFKATEEDVRKFYEPFGQIVEINFPKRPD-GAPLGCCFIQFKQLEQASKAIFN 102
Query: 278 FNGQKFGKRPIAVDWAVPKN-IYSSGGAAAGVQNKGDGNSDSGSDDDL--GDDDAETASD 334
N ++ R I+ WA+ K+ Y + V D D+ +++D DD E D
Sbjct: 103 TNKKELLGRIISSSWAISKSKYYEKIKTESAVNLDADKVDDNNTNEDQTSNKDDGEQGGD 162
Query: 335 DSN 337
N
Sbjct: 163 FDN 165
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 95/232 (40%), Gaps = 30/232 (12%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTG----FLKFKTVEAATAA 483
I + N+PF E+V++ + FG++V KRP G F++FK +E A+ A
Sbjct: 45 IIVRNVPFKATEEDVRKFYEPFGQIVEI-----NFPKRPDGAPLGCCFIQFKQLEQASKA 99
Query: 484 VSASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGT 543
+ + LG + +K+ + ++ ++ +D+ E
Sbjct: 100 IFNTNKKELLGRIISSSWAISKSKYYEKIKTESAVNLDADKVDDNN----TNEDQTSNKD 155
Query: 544 PAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVV 603
+G D+ K + ++ L+ N R R+++ NL +TE+ LK
Sbjct: 156 DGEQGGDFDNKEKLTQIKRERRKLLKDKN-RKKRARIIVRNLAFQVTEENLKDHF----- 209
Query: 604 SRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLN 655
Q I+++K L+ + D K+ G AF++F Q A A+ N
Sbjct: 210 ----SQYGEIEEVKILK-----RSDGKNV--GCAFLQFDHVQSAAKAIHYAN 250
>gi|444726902|gb|ELW67417.1| RNA-binding protein 28 [Tupaia chinensis]
Length = 733
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 157/462 (33%), Positives = 231/462 (50%), Gaps = 34/462 (7%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+LIIRN+ FK +++K +F+ G V V IP D G +GFAFV+F +A A++
Sbjct: 115 RLIIRNLSFKCSEDDLKTLFTQFGTVLEVNIPRKPD-GKMRGFAFVQFKNLLEAGKALKG 173
Query: 278 FNGQKFGKRPIAVDWAVPKNIY---SSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASD 334
N ++ R +AVDWAV K+ Y S A G + + ++ +++ +
Sbjct: 174 MNMKEIKGRMVAVDWAVAKDKYKDTQSASAPVGQEKNSEPEHQGSIKKNVREEEDVEGEE 233
Query: 335 DSNSSEKEDLPSN----------ADFDEEVDIARKVLNKLTSTTGSLPSLSDDSAL---- 380
D E +D S+ ++ + V I ++ + + S +DS
Sbjct: 234 DDEDDEDDDEDSDDDDSAGGSKASNLTKPVQIQKRAIKRAAPAESSEDHSDEDSDQEEKE 293
Query: 381 -VKGNKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQ--TEGEDELQNTIFICNLPFDL 437
++ D T N+ + DV SK K + L TEG+ T+FI NL FD
Sbjct: 294 GTDDGEDMDQSDTSNDEQEDEDV---QISKKKKRKLPSDVTEGK-----TVFIRNLSFDS 345
Query: 438 DNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA-SKTTSGLGIF 496
+ E++ + FG + VLH T+ KG F +F T EAA ++A S + G G+
Sbjct: 346 EEEDLGELLQQFGNLKYVRIVLHPDTEHSKGCAFAQFTTQEAAQKCLTAASPESEGGGLK 405
Query: 497 LKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSK 556
L GRQL V A+ + A + K K T RNLYLA+EGLI GT AAEGVS DM+K
Sbjct: 406 LDGRQLKVDLAVTRDEAAKLQTKKVKKPTGT-RNLYLAREGLIRAGTKAAEGVSAADMAK 464
Query: 557 RQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQI 616
R+ K KL+ N VS+TRL ++NLPK++ + L+KL + A + IK+
Sbjct: 465 RERFELLKHQKLKDQNIFVSQTRLCLHNLPKAVDDTQLRKLLLTATKGEKGVR---IKEC 521
Query: 617 KFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
+ ++ LK K S G AF EF EH+HAL ALR +NNNP
Sbjct: 522 RVMRDLKGVHGKVKGQSLGYAFAEFQEHEHALRALRHINNNP 563
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV 43
+VT+KGS RGFGYV F++ ED RA+ K T+ G KI V
Sbjct: 35 VVTEKGSKVCRGFGYVTFSMREDVQRAI--KEVTTFEGCKIDV 75
>gi|74142527|dbj|BAE33848.1| unnamed protein product [Mus musculus]
gi|148681846|gb|EDL13793.1| RNA binding motif protein 28, isoform CRA_b [Mus musculus]
Length = 750
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 156/450 (34%), Positives = 235/450 (52%), Gaps = 19/450 (4%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+LIIRN+ FK +++K +F+ G V V IP D G +GFAFV+F +A A++
Sbjct: 115 RLIIRNLSFKCSEDDLKAVFTHYGTVLEVNIPKKPD-GKMRGFAFVQFKNLLEAGKALKG 173
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSG--GAAAGVQNKGDGNS-DSGSDD-DLGDDDAETAS 333
N ++ R +AVDWAV K+ Y +A GV+ D +SG + + + ++
Sbjct: 174 ANMKEIKGRTVAVDWAVAKDKYKDAQHASAPGVKKSSDRKPKESGKKNCRVEEQVEDSDD 233
Query: 334 DDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLS-DDSALVKGNKEQDSDKT 392
++ + S ++ + V + ++ + + S +DS L +G D
Sbjct: 234 EEDDDSHDDEEERESTIASPVSVHKRAVKRAAPEESIEEDDSYEDSDLEEGGSSYDEGTV 293
Query: 393 VNES-AKVSDVSKLNSSKSKPKSLKQ--TEGEDELQNTIFICNLPFDLDNEEVKQRFSAF 449
+ES A+ + + S+ K + L TEG+ T+FI NL FD + E + + F
Sbjct: 294 DSESSAEDQEDEDVPVSEKKKRKLPSDVTEGK-----TVFIRNLSFDSEEEALGEVLQQF 348
Query: 450 GEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA-SKTTSGLGIFLKGRQLTVLKAL 508
G++ VLH T+ KG F +F T EAA ++A S G G+ L GRQL V A+
Sbjct: 349 GDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDGRQLKVDLAV 408
Query: 509 DKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL 568
+ A + K K T RNLYLA+EGLI GT AAEGVS DM+KR+ K KL
Sbjct: 409 TRDEAAKLQTKKVKKPTGT-RNLYLAREGLIRAGTKAAEGVSAADMAKRERFELLKHQKL 467
Query: 569 QSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVD 628
++ N VS+TRL ++NLPK++ +K L+KL ++A + IK+ + ++ LK
Sbjct: 468 KNQNIFVSQTRLCLHNLPKAVDDKQLRKLLLEATRGEKGVR---IKECRVMRDLKGVHGK 524
Query: 629 TKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
K S G AF EF +H+HAL ALR NNNP
Sbjct: 525 MKGQSLGYAFAEFQKHEHALRALRHFNNNP 554
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV 43
+VT+KGS RGFGYV F+++ED RA +K T+ G KI V
Sbjct: 35 VVTEKGSKACRGFGYVTFSMLEDVQRA--LKEITTFEGCKIDV 75
>gi|166235127|ref|NP_598686.2| RNA-binding protein 28 [Mus musculus]
gi|341942269|sp|Q8CGC6.4|RBM28_MOUSE RecName: Full=RNA-binding protein 28; AltName: Full=RNA-binding
motif protein 28
Length = 750
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 156/450 (34%), Positives = 235/450 (52%), Gaps = 19/450 (4%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+LIIRN+ FK +++K +F+ G V V IP D G +GFAFV+F +A A++
Sbjct: 115 RLIIRNLSFKCSEDDLKAVFTHYGTVLEVNIPKKPD-GKMRGFAFVQFKNLLEAGKALKG 173
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSG--GAAAGVQNKGDGNS-DSGSDD-DLGDDDAETAS 333
N ++ R +AVDWAV K+ Y +A GV+ D +SG + + + ++
Sbjct: 174 ANMKEIKGRTVAVDWAVAKDKYKDAQHASAPGVKKSSDRKPKESGKKNCRVEEQVEDSDD 233
Query: 334 DDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLS-DDSALVKGNKEQDSDKT 392
++ + S ++ + V + ++ + + S +DS L +G D
Sbjct: 234 EEDDDSHDDEEERESTIASPVSVHKRAVKRAAPEESIEEDDSYEDSDLEEGGSSYDEGTV 293
Query: 393 VNES-AKVSDVSKLNSSKSKPKSLKQ--TEGEDELQNTIFICNLPFDLDNEEVKQRFSAF 449
+ES A+ + + S+ K + L TEG+ T+FI NL FD + E + + F
Sbjct: 294 DSESSAEDQEDEDVPVSEKKKRKLPSDVTEGK-----TVFIRNLSFDSEEEALGEVLQQF 348
Query: 450 GEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA-SKTTSGLGIFLKGRQLTVLKAL 508
G++ VLH T+ KG F +F T EAA ++A S G G+ L GRQL V A+
Sbjct: 349 GDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDGRQLKVDLAV 408
Query: 509 DKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL 568
+ A + K K T RNLYLA+EGLI GT AAEGVS DM+KR+ K KL
Sbjct: 409 TRDEAAKLQTKKVKKPTGT-RNLYLAREGLIRAGTKAAEGVSAADMAKRERFELLKHQKL 467
Query: 569 QSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVD 628
++ N VS+TRL ++NLPK++ +K L+KL ++A + IK+ + ++ LK
Sbjct: 468 KNQNIFVSQTRLCLHNLPKAVDDKQLRKLLLEATRGEKGVR---IKECRVMRDLKGVHGK 524
Query: 629 TKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
K S G AF EF +H+HAL ALR NNNP
Sbjct: 525 MKGQSLGYAFAEFQKHEHALRALRHFNNNP 554
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV 43
+VT+KGS RGFGYV F+++ED RA +K T+ G KI V
Sbjct: 35 VVTEKGSKACRGFGYVTFSMLEDVQRA--LKEITTFEGCKIDV 75
>gi|345780008|ref|XP_532435.3| PREDICTED: RNA-binding protein 28 isoform 2 [Canis lupus
familiaris]
Length = 751
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 160/457 (35%), Positives = 233/457 (50%), Gaps = 25/457 (5%)
Query: 215 QKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESA 274
+K +LIIRN+ FK +++K +F G V V IP D G +GFAFV+F +A A
Sbjct: 112 KKARLIIRNLSFKCSEDDLKTVFGQYGAVLEVNIPRKPD-GKMRGFAFVQFKNLLEAGKA 170
Query: 275 IQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGV-----QNKGDGNSDSGSDDDLGDDDA 329
++ N ++ R +AVDWAV K+ Y + +A+ + K S ++ ++
Sbjct: 171 LKSMNMKEIKGRTVAVDWAVAKDKYKNTQSASAPGEKRPEPKHQELSKENGREEEDMEEE 230
Query: 330 ETASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDS 389
E DD+ E + + + I ++ + + S SD+ + G KE+D
Sbjct: 231 EEEEDDTEEEEDGEEDKESRVTKPAQIQKRAVRRAAPAESSEEDHSDEDS---GLKERD- 286
Query: 390 DKTVNESAKVSDVSK-------LNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEV 442
D E SD + + SK K + L E + T+FI NL FD + EE+
Sbjct: 287 DSIDGEELAQSDTNSEEQEDEDMQISKKKKRKLPSDVNEGK---TVFIRNLSFDSEEEEL 343
Query: 443 KQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV-SASKTTSGLGIFLKGRQ 501
+ FG++ VLH T+ KG F +F T EAA + +AS T G G+ L GRQ
Sbjct: 344 GELLQQFGDLKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLEAASPETEGGGLKLDGRQ 403
Query: 502 LTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLH 561
L V A+ + A + K K T RNLYLA+EGLI GT AAEGVS DM+KR+
Sbjct: 404 LRVDLAVTRDEAAKLQTKKVKKPTGT-RNLYLAREGLIRAGTKAAEGVSAADMAKRERFE 462
Query: 562 EKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQS 621
K KL+ N VS+TRL ++NLPK + +K L+KL ++A + +K+ + ++
Sbjct: 463 LLKHQKLKDQNIFVSQTRLCLHNLPKGVDDKELRKLLLNATRGEKGVR---LKECRVMRD 519
Query: 622 LKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
LK K S G AF EF EH+HAL ALR +NNNP
Sbjct: 520 LKGVHGKVKGQSLGYAFAEFQEHEHALTALRHINNNP 556
Score = 42.4 bits (98), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV 43
+VT+KGS RGFGYV F+++ED RA +K T+ G KI V
Sbjct: 35 VVTEKGSKACRGFGYVTFSMLEDVQRA--LKEITTFEGCKINV 75
>gi|26252146|gb|AAH40811.1| Rbm28 protein [Mus musculus]
Length = 750
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 155/450 (34%), Positives = 234/450 (52%), Gaps = 19/450 (4%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+LIIRN+ FK +++K +F+ G V V IP D G +GFAFV+F +A A++
Sbjct: 115 RLIIRNLSFKCSEDDLKAVFTHYGTVLEVNIPKKPD-GKMRGFAFVQFKNLLEAGKALKG 173
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSG--GAAAGVQNKGDGNS-DSGSDD-DLGDDDAETAS 333
N ++ R +AVDWAV K+ Y +A GV+ D +SG + + + ++
Sbjct: 174 ANMKEIKGRTVAVDWAVAKDKYKDAQHASAPGVKKSSDRKPKESGKKNCRVEEQVEDSDD 233
Query: 334 DDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLS-DDSALVKGNKEQDSDKT 392
++ + S ++ + V + ++ + + S +DS L +G D
Sbjct: 234 EEDDDSHDDEEERESTIASPVSVHKRAVKRAAPEESIEEDDSYEDSDLEEGGSSYDEGTV 293
Query: 393 VNES-AKVSDVSKLNSSKSKPKSLKQ--TEGEDELQNTIFICNLPFDLDNEEVKQRFSAF 449
+ES A+ + + S+ K + L TEG+ T+FI NL FD + E + + F
Sbjct: 294 DSESSAEDQEDEDVPVSEKKKRKLPSDVTEGK-----TVFIRNLSFDSEEEALGEVLQQF 348
Query: 450 GEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA-SKTTSGLGIFLKGRQLTVLKAL 508
G++ VLH T+ KG F +F T EAA ++A S G G+ L GRQL V A+
Sbjct: 349 GDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASPEAEGGGLKLDGRQLKVDLAV 408
Query: 509 DKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL 568
+ A + K K T RNLYLA+EGLI GT AAEGVS DM+KR+ K KL
Sbjct: 409 TRDEAAKLQTKKVKKPTGT-RNLYLAREGLIRAGTKAAEGVSAADMAKRERFELLKHQKL 467
Query: 569 QSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVD 628
++ N VS+TRL ++N PK++ +K L+KL ++A + IK+ + ++ LK
Sbjct: 468 KNQNIFVSQTRLCLHNFPKAVDDKQLRKLLLEATRGEKGVR---IKECRVMRDLKGVHGK 524
Query: 629 TKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
K S G AF EF +H+HAL ALR NNNP
Sbjct: 525 MKGQSLGYAFAEFQKHEHALRALRHFNNNP 554
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV 43
+VT+KGS RGFGYV F+++ED RA +K T+ G KI V
Sbjct: 35 VVTEKGSKACRGFGYVTFSMLEDVQRA--LKEITTFEGCKIDV 75
>gi|297681429|ref|XP_002818457.1| PREDICTED: RNA-binding protein 28 isoform 1 [Pongo abelii]
Length = 757
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 159/464 (34%), Positives = 238/464 (51%), Gaps = 39/464 (8%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+LIIRN+ FK +++K +F+ G V V IP D G +GF FV+F +A A++
Sbjct: 115 RLIIRNLSFKCSEDDLKTVFAQFGAVLEVNIPRKPD-GKMRGFGFVQFKNLLEAGKALKG 173
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSD-------SGSDDDLGDDDAE 330
N ++ R +AVDWAV K+ Y + + + + S G +++ +++
Sbjct: 174 MNMKEIKGRTVAVDWAVAKDKYKDTQSVSAIGEEKSHESKHQESVKKKGREEEDMEEEEN 233
Query: 331 TASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSD 390
DD D + + E + + V + + + P+ S D + E+DSD
Sbjct: 234 DDDDDDEEDGVFDDEDEEEENIESKVTKPVQIQKRAVKRAAPAKSSDHS------EEDSD 287
Query: 391 KTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQN--------------TIFICNLPFD 436
+ ES + D +L ++S + +Q + ++ N T+FI NL FD
Sbjct: 288 --LEESDSIDDGEEL--AQSDTSTEEQEDKAVQVSNKKKRKLPSDVNEGKTVFIRNLSFD 343
Query: 437 LDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV-SASKTTSGLGI 495
+ EE+ + FGE+ VLH T+ KG F +F T EAA + +AS G+
Sbjct: 344 SEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLLAASPENEAGGL 403
Query: 496 FLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMS 555
L GRQL V A+ + A + K K T RNLYLA+EGLI GT AAEGVS DM+
Sbjct: 404 KLDGRQLKVDLAVTRDEAAKLQTTKVKKPTGT-RNLYLAREGLIRAGTKAAEGVSAADMA 462
Query: 556 KRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPV-IK 614
KR+ K KL+ N VSRTRL ++NLPK++ +K L+KL + A S +K V IK
Sbjct: 463 KRERFELLKHQKLKDQNIFVSRTRLCLHNLPKAVDDKQLRKLLLSAT----SGEKGVRIK 518
Query: 615 QIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
+ + ++ LK + K S G AF EF EH+HAL ALR++NNNP
Sbjct: 519 ECRVMRDLKGVHGNMKGQSLGYAFAEFQEHEHALKALRLINNNP 562
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV 43
+VT+KGS RGFGYV F+++ED RA +K T+ G KI V
Sbjct: 35 VVTEKGSKACRGFGYVTFSMLEDVQRA--LKEITTFEGCKINV 75
>gi|156379079|ref|XP_001631286.1| predicted protein [Nematostella vectensis]
gi|156218324|gb|EDO39223.1| predicted protein [Nematostella vectensis]
Length = 683
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 149/450 (33%), Positives = 225/450 (50%), Gaps = 58/450 (12%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSK--GFAFVKFTCKRDAESAI 275
+LIIRN+ F +K+ FS G V +P ++ GF FV+FT DA A+
Sbjct: 111 RLIIRNLAFNCTEAILKETFSAFGEVSEASVPQKKVGRRNRKMGFGFVQFTNVFDAAKAL 170
Query: 276 QKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDD 335
++ N +K RP+AVDWAVPK++Y+ ++K D NS++ DD+ G +D E ++
Sbjct: 171 EEMNAKKILGRPVAVDWAVPKSMYTENQE----KHKKDYNSNTLQDDEKGGEDLEGTTEH 226
Query: 336 SNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTVNE 395
N R + + + +S D N E+ + +E
Sbjct: 227 KN--------------------RDDDDDDSDDDEDVKHMSKDD----NNNEKSDEDDASE 262
Query: 396 SAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF 455
+S +SKP +K EG T+FI NL FD + + F FG++
Sbjct: 263 DDN-------HSQRSKPSDVK--EGL-----TVFIRNLSFDSTQKNITNLFKQFGDIAYC 308
Query: 456 VPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV-LKALDKKLAH 514
V+ +T+ KG+ F+K+++ E+ T ++A+ S G+FL G +L V L KL
Sbjct: 309 KVVVDHLTQHSKGSAFVKYRSAESVTQCLAATDEDSE-GLFLDGNRLQVDLAVTPGKLEQ 367
Query: 515 -DKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNF 573
++ + + + D RNLYLA+EG+I G+ AA+ +S D+ KRQ +K +KLQ+PN+
Sbjct: 368 MSRQQKEERRDPKDKRNLYLAREGVIKPGSDAAKDLSKADLLKRQKAEAEKKSKLQNPNY 427
Query: 574 HVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRAS---KQKPVIKQIKFLQSLKKGKVDTK 630
VS+TRL NLP + EK L K V S+A KP K + L K ++D+
Sbjct: 428 FVSKTRLCARNLPLKLNEKELSK-----VFSKAGTLDNHKPA-KVVSVLLMRSKERLDSS 481
Query: 631 HYSR--GVAFVEFTEHQHALVALRVLNNNP 658
R G AFVEFT H+ AL ALR NNNP
Sbjct: 482 GKGRPLGFAFVEFTNHKEALAALRATNNNP 511
>gi|242006841|ref|XP_002424253.1| RNA-binding protein, putative [Pediculus humanus corporis]
gi|212507622|gb|EEB11515.1| RNA-binding protein, putative [Pediculus humanus corporis]
Length = 529
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 150/459 (32%), Positives = 237/459 (51%), Gaps = 38/459 (8%)
Query: 211 GSKTQKWKLIIRNIPFK-AKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKR 269
G K++K K+I+RN+PFK + ++++FS G + + + ++ L G FV+F
Sbjct: 4 GHKSKKAKIIVRNLPFKNLSEDTLRNLFSEYGEIEEIKLLKKSNGKLV-GCGFVQFKKVT 62
Query: 270 DAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGD--D 327
A AI N ++ R I +DWA+PK Y NK D D ++
Sbjct: 63 SAAKAIYYGNQKELDGRKIVIDWALPKKTYLQKVNELNTTNKSDEIKTENIDFEIDSKKS 122
Query: 328 DAETASDDSNSSEKEDLPSN---ADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGN 384
D+ DD++ SE DL S +DF+ E I K N+ D + ++ +
Sbjct: 123 DSWKNKDDASDSETSDLDSKNIISDFNNETSI-HKFENE------------DSDSEIETS 169
Query: 385 KEQDSDKTVNESAKVSDVSKLNSSKSKPKSLK----QTEGEDELQNTIFICNLPFDLDNE 440
D ++ + S+ K+ +LK ++ ED T+FI NLPF NE
Sbjct: 170 DHNDENEGSDFEDSESEDDDDIKKKTGNTNLKIPARPSDAED--GKTVFIRNLPFSATNE 227
Query: 441 EVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGR 500
++++ F A+G++ + + ++T+ KGTGF+KFKT ++A+A + S I+++
Sbjct: 228 DLRENFKAYGDIEYALICIDKLTEHSKGTGFVKFKTADSASACIKDSN-----NIYIQEN 282
Query: 501 QLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQML 560
+TV AL K+ +K+ DK + + RNLYL +EG+++ G+ AA GVS DMSKR L
Sbjct: 283 PVTVTYALTKENLENKKKDKKLPKDS--RNLYLVREGVVVAGSKAAVGVSASDMSKRLQL 340
Query: 561 HEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQ 620
+ K L++ N VS+TRLVI+NLP S + LK+L + + S K VIK+ K +
Sbjct: 341 EQWKTQMLKNLNMFVSKTRLVIHNLPSSYDDSKLKQLFM-----KYSNPKAVIKEAKVMW 395
Query: 621 SLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPS 659
K KH S+ V FV F H+ AL ALR +NNNP+
Sbjct: 396 EKNKFDSKGKHISKEVGFVSFDNHEDALTALRNINNNPT 434
>gi|241358219|ref|XP_002408846.1| RNA recognition motif-containing protein [Ixodes scapularis]
gi|215497412|gb|EEC06906.1| RNA recognition motif-containing protein [Ixodes scapularis]
Length = 662
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 153/512 (29%), Positives = 237/512 (46%), Gaps = 74/512 (14%)
Query: 171 KMDASAVLYTTVKSACASVALLHQKEIKGGTVW------ARQLGGEGS------------ 212
K + V Y T SA + A L QK GG + ++ L G +
Sbjct: 48 KAECKGVAYVTYASAVDADAALTQKFKLGGNLLHVKLAASKPLRGSAAAQKAEPRPRATK 107
Query: 213 ------KTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFT 266
K +K +LI+RN+ FKA ++D F G + V IP D G +GFAFV+F
Sbjct: 108 EERLARKKRKPRLIVRNLSFKANETVLRDCFGKYGDLVEVSIPKKPD-GKMRGFAFVQFA 166
Query: 267 CKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGD 326
+ A AI N RP+AVD+ +PK Y + +K + S +D+D D
Sbjct: 167 ETKSAIKAINGLNASNISGRPVAVDFCLPKATYQNATQGQASASKAE---QSNNDEDT-D 222
Query: 327 DDAETASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKE 386
A+ S S + ED S +D D++ D N +
Sbjct: 223 GSADETSVASETPAHED--SASDLDDQGD----------------------------NTD 252
Query: 387 QDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRF 446
QD D +E ++ S LK+ + +NT+FI N+ F+ E +
Sbjct: 253 QDMD---DEQSEEEGGSDEEDEDDDELHLKRKSQPGDTKNTLFIRNISFETTQESLNSLM 309
Query: 447 SAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLK 506
FG + VT+ KG+ F+++ + + A+++++GL L GR+L+V +
Sbjct: 310 KQFGPCRYCLLCTDPVTEHSKGSAFVRYVKDASVERCLQAAQSSAGL--MLDGRRLSVAR 367
Query: 507 ALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMT 566
AL ++ D + + K + D RNL+LA+EGL+ GT AA GVS DM+KR L +K
Sbjct: 368 ALSRE-ELDAKQESEKKQKKDRRNLFLAREGLVRPGTEAAHGVSPQDMTKRAKLQSRKRK 426
Query: 567 KLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGK 626
LQ+ ++ VS+TRL ++NLP S+ ++ L+ L + A I + + +++LK
Sbjct: 427 LLQNLHYFVSQTRLCVHNLPPSVDDRKLRALFLQNAPKGAR-----ITEARVMRNLKTPS 481
Query: 627 VDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
+ SRG FV F H+ AL ALR LNNNP
Sbjct: 482 AE----SRGYGFVTFGRHEDALEALRRLNNNP 509
>gi|307198911|gb|EFN79663.1| RNA-binding protein 28 [Harpegnathos saltator]
Length = 492
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 146/448 (32%), Positives = 224/448 (50%), Gaps = 26/448 (5%)
Query: 214 TQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAES 273
+K ++IIRN+ F+A +++K FS G + V I D G G AFV+F + A
Sbjct: 5 NKKARIIIRNLSFEATYDDLKKHFSQYGKIKEVKILAKQD-GKRIGCAFVQFDHVQSAVK 63
Query: 274 AIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETAS 333
AI N Q F R I VDWAVPKN + A + K +S DD DD T
Sbjct: 64 AIHYANMQLFLNRAIVVDWAVPKNKFLKNIAENNM--KPQAKIESVDKDDA--DDQSTKP 119
Query: 334 DDSNSSEKEDLPSNADFDEEVDIARKVL--NKLTSTTGSLPSLSDDSALVKGNKEQDSDK 391
D N + ++ ++E D + +L NKL S D+SA+ + E D+
Sbjct: 120 DSKNVT-----INSIKMEDESDDEKMILYENKLESENTES---QDESAVESSDDENDASS 171
Query: 392 TVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGE 451
+N+S K S S K ++ + T+F+ N+PF + N E+K+ FG
Sbjct: 172 AINDSVKQKKKSNRIEDHSTSKHPRRVFDDVNEGKTVFLKNVPFSVKNNELKEYMEQFGP 231
Query: 452 VVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKK 511
+ + ++T+ KGT F+KFK + +A +S + + + + + +AL K
Sbjct: 232 IYYALVCTDRLTEYSKGTAFVKFKDIASAEKCLS-----NDTELCMHDQIIEAHRALCKN 286
Query: 512 LAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSP 571
+K+ K + + D RNLYL KEG+++ G+PAA VS DM+KR L + K L++
Sbjct: 287 EVENKQTLKGQ-KVKDSRNLYLVKEGVVVAGSPAATDVSVSDMAKRMKLEQWKSQILRNL 345
Query: 572 NFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVDTKH 631
N VSR RLV++NLP ++ + L++L D S K VIK+ + ++ LK +
Sbjct: 346 NMFVSRVRLVVHNLPPNLDDAQLRQLFKD-----FSGPKAVIKEARVMRDLKTVDAAGRG 400
Query: 632 YSRGVAFVEFTEHQHALVALRVLNNNPS 659
S+ FV FT H+ AL ALR NNNP+
Sbjct: 401 KSKEYGFVAFTTHEDALKALRSANNNPN 428
>gi|395539349|ref|XP_003771633.1| PREDICTED: RNA-binding protein 28 [Sarcophilus harrisii]
Length = 689
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 149/443 (33%), Positives = 231/443 (52%), Gaps = 17/443 (3%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+LIIRN+ FK ++K++F+ G V V IP D G +GFAFV+F +A A++
Sbjct: 66 RLIIRNLSFKCSEEDLKNLFAQFGAVLEVNIPRKPD-GKMRGFAFVQFKNLLEAGKALKG 124
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDDSN 337
N + R +AVDWAV K+ Y++ Q+ G ++ D E S++
Sbjct: 125 TNMTEIKGRTVAVDWAVAKDKYNA------TQSSASGEDQKTTESRQQDASQEEGSEEEG 178
Query: 338 SSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTVNE-S 396
E+E+L + + ++ L L + + + SD + E++ ++ NE +
Sbjct: 179 EFEEEELQATKPVKTQKKEGKRPLT-LEAESSEIDEESDLEDRYSSDDEEEPEQDQNEVN 237
Query: 397 AKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFV 456
+ + K K + L E + T+FI NL FD + E++++ FG++
Sbjct: 238 SNEEEPDVEVPEKKKKRKLPSDVNEGK---TVFIRNLSFDSEEEDLEEILQQFGDLKYVR 294
Query: 457 PVLHQVTKRPKGTGFLKFKTVEAATAAVSASKT-TSGLGIFLKGRQLTVLKALDKKLAHD 515
VLH T+ KG F +F T EAA A ++A+ T G+ L GR+L V A+ + A
Sbjct: 295 IVLHPDTEHSKGCAFAQFMTQEAAQACLAAASAETEDGGLKLDGRKLKVDLAVTRDEAEK 354
Query: 516 KEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHV 575
K +T RNLYLA+EGLI GT AAEG+S D++KR+ K KL+ N V
Sbjct: 355 LRTKNVKKQTGT-RNLYLAREGLIRAGTKAAEGLSVADITKRERFELLKHKKLKDQNIFV 413
Query: 576 SRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYSRG 635
S+TRL ++NLPK++ +K L++L + AV + +K+ + ++ LK + K S G
Sbjct: 414 SKTRLCLHNLPKAVDDKRLRRLVLTAV---GGGRGIRLKECRVMRDLKGAHGNVKGQSLG 470
Query: 636 VAFVEFTEHQHALVALRVLNNNP 658
AFVEF EH HAL ALR +NNNP
Sbjct: 471 YAFVEFEEHDHALAALRQINNNP 493
>gi|307179427|gb|EFN67751.1| RNA-binding protein 28 [Camponotus floridanus]
Length = 797
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 142/461 (30%), Positives = 229/461 (49%), Gaps = 37/461 (8%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+++IRN+ F+A + +K+ FS G + + I D G G AFV+F ++A AI
Sbjct: 187 RIVIRNLSFQATEDNLKEFFSQYGEIDEIKILTKPD-GKQTGVAFVQFNVVQNAAKAIHH 245
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDS------------GSDDDLG 325
N Q RP+ VDWAVPKN +S + K + ++ S+D+
Sbjct: 246 ANMQSLLNRPMIVDWAVPKNKFSENNVDVKPEIKTESTDENKVHDTSEITVIDNSEDENS 305
Query: 326 DDDAETASDD-SNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGN 384
+ DAE+ S D S S +ED+ S +E+ +I +V + S D
Sbjct: 306 EVDAESNSKDVSMKSIQEDIESE---EEDTEIKHEVEDTDNENDNDNDSDDDSDDDDINI 362
Query: 385 KEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQ 444
S V ++ + S+ + N+ + S +EG T+F+ N+PF + N+E+K
Sbjct: 363 TIDQS---VIKTEEESEKNCFNAKHPRQISNDVSEGR-----TVFLKNVPFSVKNDELKS 414
Query: 445 RFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV 504
FG + + + +T+ KGT F+KF+ +E A +SA G + L+ + +
Sbjct: 415 FMEQFGPIYYALVCIDPLTEYSKGTAFVKFRNIEDAEKCLSA-----GTELRLRDQIIEA 469
Query: 505 LKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKK 564
+AL K +K + K +T D RNLYL KEG++L G+PAA VS DM +R L + K
Sbjct: 470 HRALHKNEVGNK-TNLKKQKTKDSRNLYLVKEGVVLAGSPAAGEVSMSDMEQRLKLEQWK 528
Query: 565 MTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKK 624
L++ N +SR RL ++NLP ++ + L++L S K +I++ + ++ LK
Sbjct: 529 SQMLRNLNMFISRVRLAVHNLPSNLDDAELRQL-----FKNHSGPKAIIREARIMRDLKN 583
Query: 625 GKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPSKLFYHH 665
K S+ FV FT H+ AL ALR +NNNP+ +F H
Sbjct: 584 VDATGKGKSKEYGFVTFTSHEDALKALRSINNNPN-IFSKH 623
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Query: 215 QKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESA 274
Q ++I+RN+PFK +IK + P G + + + D L G F++F DA A
Sbjct: 39 QNSRIIVRNLPFKVTEEDIKKFYKPFGEITEINLLKRPDGNLV-GCGFIRFKHMEDASKA 97
Query: 275 IQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASD 334
I N ++F R I+ +WA+ K+ + ++ GN + ++ DA+ +
Sbjct: 98 IFNTNKKEFLGRTISCNWAISKSKFRE-----KLEKDLSGNQEVDKNEKQLSQDAQKEEN 152
Query: 335 DSNSSEK 341
++N +K
Sbjct: 153 ENNIQKK 159
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 107/239 (44%), Gaps = 46/239 (19%)
Query: 425 QNT-IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGT----GFLKFKTVEA 479
QN+ I + NLPF + E++K+ + FGE+ + KRP G GF++FK +E
Sbjct: 39 QNSRIIVRNLPFKVTEEDIKKFYKPFGEITEI-----NLLKRPDGNLVGCGFIRFKHMED 93
Query: 480 ATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDK-EIDKSKNETNDHRNLYLAKEGL 538
A+ A+ + L GR ++ A+ K +K E D S N+ D L+++
Sbjct: 94 ASKAIFNTNKKEFL-----GRTISCNWAISKSKFREKLEKDLSGNQEVDKNEKQLSQD-- 146
Query: 539 ILEGTPAAEGVSDDDMSKRQMLHEK------KMTKLQSPNFHVSRTRLVIYNLPKSMTEK 592
A + +++++ K++ EK K KLQ R R+VI NL TE
Sbjct: 147 ------AQKEENENNIQKKKFTKEKDNLNKLKKRKLQKMKKQKKRARIVIRNLSFQATED 200
Query: 593 GLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVAL 651
LK+ Q I +IK L K D K GVAFV+F Q+A A+
Sbjct: 201 NLKEFF---------SQYGEIDEIKIL-----TKPDGKQT--GVAFVQFNVVQNAAKAI 243
>gi|145351295|ref|XP_001420018.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580251|gb|ABO98311.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 870
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 148/245 (60%), Gaps = 6/245 (2%)
Query: 420 GEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEA 479
GE T+F+ NLP + +++K++ FG+V S V + T + G F+ F +
Sbjct: 452 GETPENVTVFVRNLPLEATWQQLKEKMMKFGKVTSCRVVKDKTTGKHTGNAFVDFTNANS 511
Query: 480 ATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEID-----KSKNETNDHRNLYLA 534
A AAV A ++ S GIF+ GR +TV AL K A D ++ N+ D+RNLYLA
Sbjct: 512 ANAAVEAGESESA-GIFVAGRPITVALALSKAEAADMMARQGAKYRNANKHRDNRNLYLA 570
Query: 535 KEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGL 594
+EG I E + AA+GVS D+ KR+ +E++ KL++PNF +SRTRL + N+P + K L
Sbjct: 571 QEGDIHEASAAADGVSKSDIDKRRRSNEERQLKLKNPNFFISRTRLSVRNIPPEIDSKTL 630
Query: 595 KKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVL 654
KK+ I+AV RA++ P + K L +K + K S+G+ F+EFTEH+HAL ALR L
Sbjct: 631 KKMFIEAVQQRATQAVPKVLHAKLLYDNEKMDENGKPRSKGMGFIEFTEHEHALTALRAL 690
Query: 655 NNNPS 659
NNNP+
Sbjct: 691 NNNPN 695
>gi|350397588|ref|XP_003484924.1| PREDICTED: RNA-binding protein 28-like [Bombus impatiens]
Length = 768
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 142/458 (31%), Positives = 230/458 (50%), Gaps = 42/458 (9%)
Query: 205 RQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVK 264
R+L + ++ ++ +++IRN+ F+A ++K FSP G V + I +D G + G AF++
Sbjct: 184 RRLLKDKNRKKRARIVIRNLSFQATEEDLKKHFSPYGAVEEIRILKRSD-GKNIGCAFLQ 242
Query: 265 FTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDL 324
F + A AI N Q RPI VDWAV KN ++ NS++ +D++
Sbjct: 243 FEHVQSAAKAIHYTNLQSLLNRPIIVDWAVSKNKFAQN------------NSENKQEDEV 290
Query: 325 GDDDAETASDDSNSSEKEDLPSNADF---DEEVDIARKVLNKLTSTTGSLPSLSDDSALV 381
E SD ++ + L N + DE++DI V + L + D
Sbjct: 291 RVK-VEDESDIEDTDNTKQLSLNGELEGEDEKLDI---VTENVEFDNNCLDEVETD---- 342
Query: 382 KGNKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEE 441
N+ + S N + + +K + KS +EG+ TIF+ N+PF + N+E
Sbjct: 343 --NESEISGNNENNEDEEQGKIDIKETKPRFKSHDVSEGK-----TIFLKNVPFSVKNDE 395
Query: 442 VKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQ 501
+K+ +G V + + +T+ +GT F+KFK VE A +SA G + ++ +
Sbjct: 396 LKKYMERYGPVYYALVCIDPLTEFSRGTAFVKFKNVEDAEKCLSA-----GNELQMEDQI 450
Query: 502 LTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLH 561
L +ALD+ +K K + D RNLYL KEG+IL G+ AA GVS DMSKR +
Sbjct: 451 LEAHRALDRNEIENKANSKQYKQK-DSRNLYLVKEGVILAGSSAAVGVSATDMSKRLQIE 509
Query: 562 EKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQS 621
K L++ N VSR RLV++NLP ++ + +K ++ R S VI++ + ++
Sbjct: 510 RWKSQILRNLNMFVSRVRLVVHNLPATLNDDKFRK-----ILERHSPPTAVIREARIMRD 564
Query: 622 LKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPS 659
K + S+ FV FT+H+ AL LR +NNNP+
Sbjct: 565 PKNVDLKGVWKSKEYGFVSFTKHEDALETLRSVNNNPN 602
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 214 TQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAES 273
+K ++I+RNIPFK ++K ++ P G + + P TD G G F++F +DA
Sbjct: 40 NKKPRIIVRNIPFKTTPEDVKKLYEPFGEILEINFPKRTD-GSPVGCCFIQFKQLKDASK 98
Query: 274 AIQKFNGQKFGKRPIAVDWAVPKNIY 299
AI N ++F R I WAV ++ Y
Sbjct: 99 AIFSTNKKEFLGRIINSSWAVSRSKY 124
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 17/178 (9%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
I + N+PF E+VK+ + FGE++ + + P G F++FK ++ A+ A+ ++
Sbjct: 45 IIVRNIPFKTTPEDVKKLYEPFGEILE-INFPKRTDGSPVGCCFIQFKQLKDASKAIFST 103
Query: 488 KTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDH-------RNLYLAKEGLIL 540
LG + +KL D E K+KN N+H RN +
Sbjct: 104 NKKEFLGRIINSSWAVSRSKYCEKLKKDSE--KAKNLDNEHGTSEGTERN-----QDKKH 156
Query: 541 EGTPAAEGVSDDDMSKRQMLHE--KKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKK 596
E + ++D SK++ L + ++ +L R R+VI NL TE+ LKK
Sbjct: 157 ENKQMKQDEDEEDPSKQETLLQIKRERRRLLKDKNRKKRARIVIRNLSFQATEEDLKK 214
>gi|308808846|ref|XP_003081733.1| rna-binding protein 28 (rna-binding motif protein 28) (IC)
[Ostreococcus tauri]
gi|116060199|emb|CAL56258.1| rna-binding protein 28 (rna-binding motif protein 28) (IC), partial
[Ostreococcus tauri]
Length = 818
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/243 (41%), Positives = 146/243 (60%), Gaps = 7/243 (2%)
Query: 422 DELQN-TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAA 480
D ++N T+F+ NLP + +++K++ FG+V S V + T + G F+ F ++A
Sbjct: 479 DAVENATVFVRNLPLEATWQQLKEKMEKFGKVKSCRVVKDKTTGKHVGNAFVDFTNPDSA 538
Query: 481 TAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEID-----KSKNETNDHRNLYLAK 535
AAV A S GIF+ GR +TV AL K A D ++ N+ D+RNLYLA
Sbjct: 539 NAAVEAGAQESA-GIFVAGRPITVALALSKTEAQDMMARQGSKYRNANKHRDNRNLYLAS 597
Query: 536 EGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLK 595
EG I E + AA+GVS D+ KR+ +E++ KL++PNF VSRTRL + N+P M K LK
Sbjct: 598 EGDIHEASAAADGVSKSDIEKRRRANEERQLKLKNPNFFVSRTRLSVRNIPPEMDSKTLK 657
Query: 596 KLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLN 655
K+ I+AV RA+ P + K L ++ + K ++G+ FVEF+EH+HAL ALR LN
Sbjct: 658 KMFIEAVQKRATHAAPKVMHAKLLYDSERMDENGKPKNKGIGFVEFSEHEHALTALRALN 717
Query: 656 NNP 658
NNP
Sbjct: 718 NNP 720
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 428 IFICNLPFDLDNEEVKQRFS-AFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
+F+ NLP+D D++ V FS AFG V V + T +G G++KF E A AAV A
Sbjct: 27 VFVRNLPYDADDKAVLDVFSDAFGPVKECWTVAERGTGTRRGFGYVKFAIPEDARAAVEA 86
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKK 511
S T I L GR+L V A K+
Sbjct: 87 SGT-----ITLNGRKLGVSMARPKE 106
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 10/128 (7%)
Query: 219 LIIRNIPF----KAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESA 274
+ +RN+P+ KA ++ D F PV W V TG +GF +VKF DA +A
Sbjct: 27 VFVRNLPYDADDKAVLDVFSDAFGPVKECWTVA---ERGTGTRRGFGYVKFAIPEDARAA 83
Query: 275 IQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKG-DGNSDSGSDDDLGDDDAETAS 333
++ R + V A PK GG + G DG + DD G + +
Sbjct: 84 VEASGTITLNGRKLGVSMARPKE--REGGERGARRPAGEDGTATDERKDDRGGEVGTVKT 141
Query: 334 DDSNSSEK 341
+ +N+ K
Sbjct: 142 EGTNARAK 149
>gi|193586991|ref|XP_001951686.1| PREDICTED: RNA-binding protein 28-like [Acyrthosiphon pisum]
Length = 625
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 147/472 (31%), Positives = 241/472 (51%), Gaps = 44/472 (9%)
Query: 197 IKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGL 256
+K +A+ + ++ +LIIRN+PF ++K+ FS G + ++ + D L
Sbjct: 1 MKDKIFFAKNKASKCPNNRRGRLIIRNLPFTTDEEQLKEHFSKFGEINDIKLLRKPDGKL 60
Query: 257 SKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNS 316
G FV+F K++A AI +G+ FG R I VDWA+PKN Y +
Sbjct: 61 I-GCGFVQFIVKQNAAKAIAHTSGKDFGGRSIVVDWAIPKNKYETIHTT----------K 109
Query: 317 DSGSDDDLGDDDAETASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSD 376
+ + + +++ E A + KEDL ++ D EE + L + +L D
Sbjct: 110 EKEENISVKEENIEEAIVEDQEEIKEDLSNDQDNIEESSKTVEDYLTLDTIKDEDDNLVD 169
Query: 377 -DSALVKGNKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPF 435
++ ++ + +Q + T + + +S S+K + KS EG T+F N+ F
Sbjct: 170 FETTYIENDVKQKRENTDDNESVIS-----TSNKKRFKSHDVKEGL-----TVFFKNVSF 219
Query: 436 DLDNEEVKQRF--SAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGL 493
++N+E+K RF FG + + + ++T+ KGT F+KF+ +++V A ++S
Sbjct: 220 SVNNDELK-RFVKERFGPIYYALVCVDRLTEHSKGTAFVKFRD----SSSVEACMSSSPE 274
Query: 494 GIFLKGRQLTVLKALDKKLAHDKEIDKSKNET---NDHRNLYLAKEGLILEGTPAAEGVS 550
+ L G + A+DK++ +DK+K++ D+RNLYL KEG+I+ GT AA GVS
Sbjct: 275 ELTLNGSTMEPQMAIDKEV-----LDKNKDDKVTHKDNRNLYLIKEGVIIVGTAAANGVS 329
Query: 551 DDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQK 610
DM KR L + K L++ N V+R RL+I+NLP +M K LK L A +
Sbjct: 330 VHDMKKRLELEQWKSQVLKNLNMFVARNRLIIHNLPANMDNKTLKDLFTKYTHPNAVSKV 389
Query: 611 PVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPSKLF 662
V++ +K + S G +K Y AFV F +H+ AL ALR +NNNP K+F
Sbjct: 390 VVMRNLKQVDS--NGVAISKEY----AFVTFKQHEDALKALRSINNNP-KIF 434
>gi|255079704|ref|XP_002503432.1| predicted protein [Micromonas sp. RCC299]
gi|226518699|gb|ACO64690.1| predicted protein [Micromonas sp. RCC299]
Length = 966
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 95/241 (39%), Positives = 143/241 (59%), Gaps = 9/241 (3%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++FI ++P + + + + +R S FG+V S V+ + + RPKGT F+ F +AA AV A
Sbjct: 534 SVFIRDVPTECNKQMLFERMSKFGKVRSCRMVMDKASGRPKGTAFVDFVKPDAAKTAVEA 593
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNET---------NDHRNLYLAKEG 537
+ G G+ + GR++T+ A+ A ++K+ D+RNLYLA EG
Sbjct: 594 AGKVEGGGVKVAGRRVTLALAVSASEAASLATQRTKDAAPGKGKRDGPRDNRNLYLASEG 653
Query: 538 LILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKL 597
I E PAA+GVS D+ KR+ E++ KL++PNF +SRTRL + N+P + +K LKK+
Sbjct: 654 QIHEEGPAAQGVSQADIMKRRRAKEEQALKLKNPNFFISRTRLQVRNVPPEVDQKELKKI 713
Query: 598 CIDAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNN 657
++AV RA++ P + K L + + K SRG+ FVEF EH+HAL ALR LNNN
Sbjct: 714 FLEAVKKRATQANPRVMHAKLLYDPTRPDAEGKPRSRGIGFVEFAEHEHALAALRALNNN 773
Query: 658 P 658
P
Sbjct: 774 P 774
>gi|340715217|ref|XP_003396115.1| PREDICTED: RNA-binding protein 28-like [Bombus terrestris]
Length = 769
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 144/470 (30%), Positives = 231/470 (49%), Gaps = 66/470 (14%)
Query: 205 RQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVK 264
++L + ++ ++ +++IRN+ F+A ++K FSP G V + I +D G + G AF++
Sbjct: 185 KRLLKDKNRKKRARIVIRNLSFQATEEDLKKHFSPYGSVEEIRILKRSD-GKNIGCAFLQ 243
Query: 265 FTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDL 324
F + A AI N Q RPI VDWAV KN + VQN
Sbjct: 244 FEHVQSAAKAIHYTNLQPLLNRPIIVDWAVSKNKF--------VQN-------------- 281
Query: 325 GDDDAETASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGN 384
NS K++ +EE DI K + G L ++ +V N
Sbjct: 282 ------------NSENKQEDKVRVKVEEESDIEDTDNTKQLNLNGELEGEDENFDIVTEN 329
Query: 385 KEQDSD-----KTVNES--------AKVSDVSKLNSSKSKP--KSLKQTEGEDELQNTIF 429
E D+D +T NE+ + + K++ ++KP KS +EG+ TIF
Sbjct: 330 VEFDNDCLDEVETDNENEVSGNNEENEDEEQGKIDVKETKPRFKSHDVSEGK-----TIF 384
Query: 430 ICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKT 489
+ N+PF + N+E+K+ +G + + + +T+ +GT F+KFK VE A +SA
Sbjct: 385 LKNVPFSIKNDELKKYMERYGPICYALVCIDPLTEFSRGTAFVKFKNVEDAEKCLSA--- 441
Query: 490 TSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGV 549
G + ++ + L +ALD+ +K K + D RNLYL KEG++L G+ AA GV
Sbjct: 442 --GNELQMEDQILEAHRALDRNEIENKANSKQYKQK-DSRNLYLVKEGVVLAGSSAAVGV 498
Query: 550 SDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQ 609
S DMSKR + K L++ N VSR RLV++NLP ++ + +K ++ R S
Sbjct: 499 SATDMSKRLQIERWKSQILRNLNMFVSRVRLVVHNLPATLNDDKFRK-----ILERHSPP 553
Query: 610 KPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPS 659
VI++ + ++ K + S+ FV FT+H+ AL LR +NNNP+
Sbjct: 554 TAVIREARIMRDPKNVDLKGVWKSKEYGFVSFTKHEDALETLRSVNNNPN 603
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 117/281 (41%), Gaps = 56/281 (19%)
Query: 204 ARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFV 263
+++ + +K ++I+RNIPFK ++K ++ P G + + P TD G G F+
Sbjct: 30 TQEIDDNTDENKKPRIIVRNIPFKTTPEDVKKLYEPFGEILEINFPKRTD-GSPVGCCFI 88
Query: 264 KFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDD 323
+F +DA AI N ++F R I+ WAV ++ Y + + N S+D
Sbjct: 89 QFKQLKDASKAIFSTNKKEFLGRIISSSWAVSRSKYCEKLKKESEKAENLDNEHGTSED- 147
Query: 324 LGDDDAETASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKG 383
++ S + E+ D DEE D +++ L++
Sbjct: 148 ---------TERSQDKKHENKQMKQDEDEEEDPSKQ------------------ETLLQI 180
Query: 384 NKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVK 443
+E+ +L K++ K + I I NL F E++K
Sbjct: 181 KRER---------------KRLLKDKNRKKRAR-----------IVIRNLSFQATEEDLK 214
Query: 444 QRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV 484
+ FS +G V + +L + + G FL+F+ V++A A+
Sbjct: 215 KHFSPYGSVEE-IRILKRSDGKNIGCAFLQFEHVQSAAKAI 254
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 28/238 (11%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
I + N+PF E+VK+ + FGE++ + + P G F++FK ++ A+ A+ ++
Sbjct: 45 IIVRNIPFKTTPEDVKKLYEPFGEILE-INFPKRTDGSPVGCCFIQFKQLKDASKAIFST 103
Query: 488 KTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDH---RNLYLAKEGLILEGTP 544
LG + +KL KE +K++N N+H + +++
Sbjct: 104 NKKEFLGRIISSSWAVSRSKYCEKLK--KESEKAENLDNEHGTSEDTERSQDKKHENKQM 161
Query: 545 AAEGVSDDDMSKRQMLHE--KKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAV 602
+ ++D SK++ L + ++ +L R R+VI NL TE+ LKK
Sbjct: 162 KQDEDEEEDPSKQETLLQIKRERKRLLKDKNRKKRARIVIRNLSFQATEEDLKKHF---- 217
Query: 603 VSRASKQKPV--IKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
P +++I+ L+ + D K+ G AF++F Q A A+ N P
Sbjct: 218 -------SPYGSVEEIRILK-----RSDGKNI--GCAFLQFEHVQSAAKAIHYTNLQP 261
>gi|328782196|ref|XP_624495.3| PREDICTED: RNA-binding protein 28-like [Apis mellifera]
Length = 749
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 135/458 (29%), Positives = 232/458 (50%), Gaps = 43/458 (9%)
Query: 205 RQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVK 264
R+ E ++ ++ ++++RN+ F+A +++ FS G + + I D G G AFV+
Sbjct: 180 RKWLKEKNRKKRARVVVRNLSFQAMEEDLEKHFSQYGTIEEIKILKRED-GAKIGCAFVQ 238
Query: 265 FTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDL 324
F + A AI N + RPI VDWA+PKN +S K D + + D+
Sbjct: 239 FEHVQSAAKAIHYANLKPLLDRPIIVDWAIPKNKFS----------KNDPENINQEDEIK 288
Query: 325 GDDDAETASDDSNSSEKEDLPSNADF---DEEVDIARKVLNKLTSTTGSLPSLSDDSALV 381
+ E+ +D+ + K+ L SN + DE+ DI T D +
Sbjct: 289 VKVEVESDIEDNIDNIKK-LNSNEELNGEDEKHDIV---------TENDEFGTYDLEEVE 338
Query: 382 KGNKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEE 441
N E D + V E ++ D+ ++ + + + +EG+ T+F+ N+PF + N E
Sbjct: 339 TENDEDDQENEVKEQKQL-DIKEIKYPRFESHDV--SEGK-----TVFLKNVPFSVKNHE 390
Query: 442 VKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQ 501
+K+ FG V + + +T+ +GT F+KF+ V A +SA G + ++ +
Sbjct: 391 LKKYMEQFGPVYYALVCIDSLTEYSRGTAFVKFQKVVDAEKCLSA-----GNKLQMEDQI 445
Query: 502 LTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLH 561
L +ALDK +KE + +++ D RNLYL KEG++L G+PAA GVS DM+KR +
Sbjct: 446 LEAYRALDKNEIENKE-NLKQHKQKDSRNLYLIKEGVVLAGSPAAVGVSAADMAKRLQIE 504
Query: 562 EKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQS 621
+ K L++ N VSR RLV++NLP ++ + +K + R +I++ + ++
Sbjct: 505 QWKSQILRNLNMFVSRVRLVVHNLPSTLDDFKFRK-----IFERHGPPTAIIREARVMRD 559
Query: 622 LKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPS 659
+K + S+ F+ FT+H+ AL ALR +NNNP+
Sbjct: 560 IKNVDIKGVGKSKEYGFISFTKHEDALQALRNVNNNPN 597
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 65/130 (50%), Gaps = 2/130 (1%)
Query: 214 TQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAES 273
+K ++I+RNIPFKA ++K ++ G + + P TD L G F++F DA
Sbjct: 38 NKKPRIIVRNIPFKATKEDVKKLYESFGEILEINFPKRTDGTLV-GCCFIQFKQLEDASK 96
Query: 274 AIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETAS 333
AI N ++F R I+ WAV K+ Y ++N D + ++D ++ + +
Sbjct: 97 AIFNTNKKEFLGRVISSGWAVSKSKYCE-KLKKELENLNDKDHTDQNEDKNKNEKYKNET 155
Query: 334 DDSNSSEKED 343
+ N EK+D
Sbjct: 156 KEKNIEEKKD 165
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 104/248 (41%), Gaps = 51/248 (20%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGT----GFLKFKTVEAATAA 483
I + N+PF E+VK+ + +FGE++ KR GT F++FK +E A+ A
Sbjct: 43 IIVRNIPFKATKEDVKKLYESFGEILEI-----NFPKRTDGTLVGCCFIQFKQLEDASKA 97
Query: 484 VSASKTTSGLGIFL-------KGRQLTVLKA----LDKKLAHDKEIDKSKNETNDHRNLY 532
+ + LG + K + LK L+ K D+ DK+KNE +
Sbjct: 98 IFNTNKKEFLGRVISSGWAVSKSKYCEKLKKELENLNDKDHTDQNEDKNKNEKYKNE--- 154
Query: 533 LAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTK--LQSPNFHVSRTRLVIYNLPKSMT 590
KE I E D ++++L+ KK + L+ N R R+V+ NL
Sbjct: 155 -TKEKNIEEKK--------DQSKQKKLLYAKKEKRKWLKEKN-RKKRARVVVRNLSFQAM 204
Query: 591 EKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVA 650
E+ L+K Q I++IK L+ K+ G AFV+F Q A A
Sbjct: 205 EEDLEK---------HFSQYGTIEEIKILKREDGAKI-------GCAFVQFEHVQSAAKA 248
Query: 651 LRVLNNNP 658
+ N P
Sbjct: 249 IHYANLKP 256
>gi|198424821|ref|XP_002130575.1| PREDICTED: similar to RNA binding motif protein 28 [Ciona
intestinalis]
Length = 819
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 144/450 (32%), Positives = 227/450 (50%), Gaps = 39/450 (8%)
Query: 214 TQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAES 273
++K +LIIRN+ F +E+K F G + V IP D G +GFAFV+F+ +A
Sbjct: 217 SKKSRLIIRNLSFFCTEDELKSEFKRFGKITEVKIPVKPD-GKKRGFAFVQFSHVLEAGK 275
Query: 274 AIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETAS 333
AI++ N + R +AVDWA+P+ Y + D D++
Sbjct: 276 AIKEVNMSEIKGRKVAVDWALPREKYQEI-----------------TKSDTKDEEVPKQE 318
Query: 334 DDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTV 393
+ ++ SEK + ++ +EE + + S ++ ++ D +K
Sbjct: 319 ETTDLSEKASIEDDSQKEEEEEEKEQEEESEMEEDESEVEDEEEDEGSSEDESMDEEK-- 376
Query: 394 NESAKVSDVSKLNSSKSKPKSLKQTEGEDELQ-NTIFICNLPFDLDNEEVKQRFSAFGEV 452
E V D K KSKP+ K+TE D + T+FI NL ++ + E+K FG++
Sbjct: 377 QEEGAVKD--KEADKKSKPQ--KRTESSDVHEGKTVFIRNLSYESEEAELKIVMEKFGDI 432
Query: 453 VSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKL 512
V+++ T PKG+ F++F T E A + A + I L GR L V A +
Sbjct: 433 NYCKIVINKATGLPKGSAFVQFATKEEAEKCIEAPQ------ISLDGRDLFVTLATTR-- 484
Query: 513 AHDKEIDKSK----NETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL 568
A ++ K K E D RNLYLA EGLI GT AAEG+S+ +++KRQ + K KL
Sbjct: 485 AESTKLVKVKKEEGREKEDKRNLYLANEGLIRPGTQAAEGLSEIELNKRQRIENAKRLKL 544
Query: 569 QSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVD 628
++ N VS TRL ++NLP+++ + LK+L ++ V ++ KP I + + ++ +K +
Sbjct: 545 KNSNIFVSTTRLCVHNLPRAVDDAKLKEL-VNKVFENENR-KPKIIECRVMRDREKKTSN 602
Query: 629 TKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
S G AFV T+H+ +L ALR LNNNP
Sbjct: 603 GVGRSLGFAFVALTKHEDSLKALRSLNNNP 632
>gi|312068404|ref|XP_003137198.1| hypothetical protein LOAG_01611 [Loa loa]
gi|307767629|gb|EFO26863.1| hypothetical protein LOAG_01611, partial [Loa loa]
Length = 569
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 132/456 (28%), Positives = 211/456 (46%), Gaps = 71/456 (15%)
Query: 212 SKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSK---GFAFVKFTCK 268
S+ + W+LI+RN+PFK +++ +F+ +G + +P D GFAF++F +
Sbjct: 53 SQCKSWRLIVRNLPFKTTQEDLEAVFASIGPFTEIVLPKCKDKRFPNSCAGFAFIQFRKR 112
Query: 269 RDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDD 328
+DA AI+K N + R IA+DWA+ K D
Sbjct: 113 QDAVKAIEKLNTSEVLGRKIAIDWALSK------------------------------DT 142
Query: 329 AETASDDS---NSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSD-DSALVKGN 384
ETA + N KE++ + D V I + ++ + S SD D V+
Sbjct: 143 YETAVHEEKQRNQKMKEEIKQEVESDN-VSIIEERERGVSEIKEEVMSESDEDIQKVEKK 201
Query: 385 KEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQ 444
E+ +++ E V EG +FI NL +D ++ +++
Sbjct: 202 PEKQTEREFKEDKAV------------------LEG-----RVVFIRNLSYDTTDKALRE 238
Query: 445 RFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV 504
S FG + + + ++ PKGT F+ F+T + ++A G+ I GR++
Sbjct: 239 ALSKFGNISLAILCRYAGSEHPKGTAFVHFETPDGVEKCLTALDQAPGISI--GGRRVFG 296
Query: 505 LKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKK 564
+AL + A E +K + D RNL+L + G I GT AA G+S+ D KR L
Sbjct: 297 HRALPRSEAAKIEKEKLSKKPKDKRNLFLLRAGFIRPGTTAAAGMSETDADKRARLAVAA 356
Query: 565 MTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKK 624
KL++ + VS TRLV++NLPKS+T+K + +C A A I + + + K
Sbjct: 357 RQKLKNLHMFVSPTRLVVHNLPKSLTDKAFRSMCFIA----AGNPDARITECRIWRD--K 410
Query: 625 GKVDT--KHYSRGVAFVEFTEHQHALVALRVLNNNP 658
K+DT + SRG FV F+ HQ AL A++ LNNNP
Sbjct: 411 NKLDTSGEAVSRGFGFVNFSSHQDALSAMKHLNNNP 446
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 4 KKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLE-------QRR 56
K+ N GF ++QF +DA +A+E N + V GRKI + A+ + + E QR
Sbjct: 95 KRFPNSCAGFAFIQFRKRQDAVKAIEKLNTSEVLGRKIAIDWALSKDTYETAVHEEKQRN 154
Query: 57 SKVTQEVQAE 66
K+ +E++ E
Sbjct: 155 QKMKEEIKQE 164
>gi|91080945|ref|XP_974350.1| PREDICTED: similar to CG4806 CG4806-PA [Tribolium castaneum]
gi|270005371|gb|EFA01819.1| hypothetical protein TcasGA2_TC007421 [Tribolium castaneum]
Length = 584
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 148/453 (32%), Positives = 213/453 (47%), Gaps = 62/453 (13%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L+IRN+PF+A +K+ F+ G V V + D L G FV+F + A A
Sbjct: 37 RLVIRNLPFEATEENLKEHFAQFGEVQEVKVLKKEDGKLV-GCGFVQFKLVQKAAKARHH 95
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDDSN 337
NG+ F R I VD+A+ KN Y + +D E +D
Sbjct: 96 LNGKPFLGREIEVDFALAKNKYKT------------------------EDKKEIKEEDEV 131
Query: 338 SSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQD-SDKTVNES 396
++E + D DE ++A +V + D++ + + EQ +D NE
Sbjct: 132 KVKEEPV----DVDESQEVAEEVKS------------EDEAEGIGSDSEQKKTDSEDNEG 175
Query: 397 AKVSDVSKLNSSKSKPK--SLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVS 454
+ + KPK S TEG+ TIFI N+PF N+++KQ S FG +
Sbjct: 176 VSDEEEEEQEPPVKKPKFESNDVTEGK-----TIFIKNVPFTATNDDIKQCMSQFGPLYY 230
Query: 455 FVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKAL--DKKL 512
+ + + T+ KGT F+KF+ E A A+ A G + L G L +AL D+
Sbjct: 231 ALICVDKYTEHSKGTAFVKFRNAEDAQKALEA-----GTELTLLGNVLDCHRALGRDEVR 285
Query: 513 AHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPN 572
+ + K D RNLYL KEG+IL G AAEGVS DM+KR L + K L++ N
Sbjct: 286 KKAETKKEEKTAPKDSRNLYLVKEGVILAGGKAAEGVSASDMAKRLQLEQYKTQMLRNLN 345
Query: 573 FHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHY 632
VSR RLVI+NLP S +K L L V S + VI++ + ++ LK D
Sbjct: 346 MFVSRERLVIHNLPPSWDDKKLHIL-----VKNNSPKNSVIREARIMRDLKNVDADGVGR 400
Query: 633 SRGVAFVEFTEHQHALVALRVLNNNPSKLFYHH 665
S+ FV F H+ AL LR LNNNP+ +F H
Sbjct: 401 SKEFGFVTFNRHEDALATLRALNNNPN-IFSAH 432
>gi|307106759|gb|EFN55004.1| hypothetical protein CHLNCDRAFT_134820 [Chlorella variabilis]
Length = 1274
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/243 (41%), Positives = 140/243 (57%), Gaps = 4/243 (1%)
Query: 421 EDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKF---KTV 477
E E T+FI LP D+ E+V + +G V S VL + + + KGT F+ F +
Sbjct: 535 EPEADATVFIRGLPLDVGKEQVFLKMKVYGPVRSCRLVLDKDSGKLKGTAFVDFYRRASA 594
Query: 478 EAATAAVSASKTTSGLGIFLKGRQLTV-LKALDKKLAHDKEIDKSKNETNDHRNLYLAKE 536
+AA+ A + + G G+ + GR V L ++ ++ D R L LAKE
Sbjct: 595 QAASDACAKGRRKEGPGVVIGGRVADVDLAVGQEEARALAVAKAAERGPRDSRRLALAKE 654
Query: 537 GLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKK 596
G I+EG+PA E +S D +KR+ E+K KL+SPNF VS RL + N+P + TEK LK+
Sbjct: 655 GQIVEGSPAWEDMSAGDRAKRKRAAEEKKLKLKSPNFVVSDCRLSVRNVPTAWTEKQLKQ 714
Query: 597 LCIDAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNN 656
I AV RASK +P +KQ+K L ++ D S+G+AFVEFTEH+HAL ALR LNN
Sbjct: 715 AFIAAVKERASKAQPQVKQVKILMDEERLGPDGTPRSKGIAFVEFTEHEHALCALRQLNN 774
Query: 657 NPS 659
NP+
Sbjct: 775 NPA 777
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ +R I ++++ FS VG V N ++ G +GF FV+F + DAE A +
Sbjct: 12 VFVRGIDASVTNEQLQEFFSEVGPVKNAFLVRRGKDGPHRGFGFVQFAVQEDAERAAAEV 71
Query: 279 NGQKFGKRPIAVDWAV 294
G++ R + V+ AV
Sbjct: 72 PGKELAGRKLKVEGAV 87
>gi|303272661|ref|XP_003055692.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463666|gb|EEH60944.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 438
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/243 (38%), Positives = 139/243 (57%), Gaps = 10/243 (4%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ +LP D + + +R FG+V S VL + T R KGT F+ F +A+ A+ A
Sbjct: 170 SVFVRDLPTDASKQSLFERMQKFGKVRSCRVVLDKTTGRSKGTAFVDFVDAASASRAIEA 229
Query: 487 SKTTSGLGIFLKGRQLTVLKALD----------KKLAHDKEIDKSKNETNDHRNLYLAKE 536
+ G G+ + GR+L + A+ K A + K ++ D+RNLYLA E
Sbjct: 230 AGKVEGGGVKVAGRRLNIALAVSATDAADLATAKSKAFATDAKKRRDGPRDNRNLYLATE 289
Query: 537 GLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKK 596
G I E PAA+GVS +D+ KR+ E++ KL++PNF +S+ RL + N+P + +K LKK
Sbjct: 290 GQIHEEGPAAQGVSREDIMKRRRAKEEQKMKLKNPNFFISKNRLQVRNVPPEVDQKQLKK 349
Query: 597 LCIDAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNN 656
+ DAV+ RA+K P + + L + + K SRG+ FVEF H HAL ALR LNN
Sbjct: 350 IFHDAVLQRATKANPKVLHARLLIDNTRPDANGKPRSRGIGFVEFDAHDHALAALRTLNN 409
Query: 657 NPS 659
NP+
Sbjct: 410 NPT 412
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 210 EGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKR 269
EG++ + W++I+RN+ FKA EI+ S G VW + IP + G KGFAF +T K
Sbjct: 1 EGARPKSWRVIVRNVSFKAAEAEIRAAMSAAGFVWELTIPKDFH-GKPKGFAFAAYTRKA 59
Query: 270 DAESAIQKFNGQKFGKRPIAVDWAVPKNIYS 300
DAE A+++ N R IAVDWA+ K+ Y+
Sbjct: 60 DAERAVKEVNATAIAGRQIAVDWAMSKHEYN 90
>gi|332024018|gb|EGI64236.1| RNA-binding protein 28 [Acromyrmex echinatior]
Length = 783
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 138/473 (29%), Positives = 230/473 (48%), Gaps = 54/473 (11%)
Query: 205 RQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVK 264
R+L + ++ +++IRN+ F+ +K+ F+ G + + I ++ + G AF++
Sbjct: 178 RKLHKMRKQKKRARIVIRNLAFQVTEVNLKEHFAQYGEIEEIKILTKPNSKPA-GVAFIQ 236
Query: 265 FTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQ------------NKG 312
+ ++A AI N RP+ VDWAVPK + V+ N
Sbjct: 237 YNIVQNAAKAIHYANMLPLLNRPMIVDWAVPKTKFFQNNTNMKVEVKTEPIDEDEVHNIS 296
Query: 313 DGNSDSGSDDDLGDDDAETASDDSNSSEKEDLPSNADFDEEVDIAR-----KVLNKLTST 367
+ N+ S S +D+ D DAE+ + + S KE+ S D+E+ I + S
Sbjct: 297 EINASSNSKNDVSDSDAESDREVTVESIKEETES----DDEIKIHKAEDTDDEDENDDSN 352
Query: 368 TGSLPSLSDDSALVKGNKEQDSDKTVNESAKVS-DVSKLNSSKSKPKSLKQTEGEDELQN 426
+ ++ D S + + + +Q+ ++ +VS DVS EG+
Sbjct: 353 DNNDSNIIDRSIIKEEDIDQEEKYSIKRPNRVSNDVS---------------EGK----- 392
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
TIF+ N+PF + N+E+K+ FG V + + +T+ +GT F+KF+ VE A +SA
Sbjct: 393 TIFLKNIPFSVKNDELKKCMEQFGPVYYALVCMDPLTEYSRGTAFVKFQRVEDAENCLSA 452
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
G + L+ + + +AL + DK+ + + D RNLYL KEG++L +PAA
Sbjct: 453 -----GTELRLRDQIIEAHRALRRNEVEDKK-NLKGKKIKDSRNLYLIKEGVVLAKSPAA 506
Query: 547 EGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRA 606
VS DM KR L + K L++ N VSR RL ++NLP + + L++L
Sbjct: 507 AEVSVSDMEKRLKLEQWKSQMLRNLNMFVSRVRLAVHNLPSNFDNEKLRQL-----FKNH 561
Query: 607 SKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPS 659
S K +IK+ + ++ LK K S+ FV FT H+ AL ALR +NNNP+
Sbjct: 562 SGPKAIIKEARVMRDLKNVDATGKGKSKEYGFVTFTSHEDALKALRSINNNPN 614
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 118/273 (43%), Gaps = 59/273 (21%)
Query: 403 SKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEV--VSFVPVLH 460
+KL +KS + T +E + I + NL F E++++ + FGE+ ++F+
Sbjct: 24 AKLRRAKSSEVKITDTANINEQNSRIIVKNLSFKATEEDIRRFYEPFGEIKEINFL---- 79
Query: 461 QVTKRPKGT---GFLKFKTVEAATAAVSASKTTSGLGIFLKGR----QLTVLKALDKKLA 513
KRP G F+ FK VE A+ A+ + LG + +L + L K LA
Sbjct: 80 ---KRPDGNLVGCFIDFKRVEDASKAIFNTNKKEFLGRNISTNWAISKLKFSEKLKKSLA 136
Query: 514 HDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEK------KMTK 567
++EIDK + + D + KE D D +++++ EK K+ K
Sbjct: 137 ENQEIDKDEGPSQDTQ-----KEN------------DDSDNTQKKITKEKSNLRKQKIRK 179
Query: 568 LQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKV 627
L R R+VI NL +TE LK+ Q I++IK L
Sbjct: 180 LHKMRKQKKRARIVIRNLAFQVTEVNLKEHFA---------QYGEIEEIKIL-------- 222
Query: 628 DTKHYSR--GVAFVEFTEHQHALVALRVLNNNP 658
TK S+ GVAF+++ Q+A A+ N P
Sbjct: 223 -TKPNSKPAGVAFIQYNIVQNAAKAIHYANMLP 254
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 105/270 (38%), Gaps = 67/270 (24%)
Query: 215 QKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESA 274
Q ++I++N+ FKA +I+ + P G + + D L F+ F DA A
Sbjct: 45 QNSRIIVKNLSFKATEEDIRRFYEPFGEIKEINFLKRPDGNLVG--CFIDFKRVEDASKA 102
Query: 275 IQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASD 334
I N ++F R I+ +WA+ K +S + +N+ + + D G D + +D
Sbjct: 103 IFNTNKKEFLGRNISTNWAISKLKFSEKLKKSLAENQ-EIDKDEGP-----SQDTQKEND 156
Query: 335 DSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTVN 394
DS++++K K+T +L
Sbjct: 157 DSDNTQK---------------------KITKEKSNL----------------------- 172
Query: 395 ESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVS 454
K+ + K+ K + + I I NL F + +K+ F+ +GE+
Sbjct: 173 RKQKIRKLHKMRKQKKRAR--------------IVIRNLAFQVTEVNLKEHFAQYGEIEE 218
Query: 455 FVPVLHQVTKRPKGTGFLKFKTVEAATAAV 484
+ +L + +P G F+++ V+ A A+
Sbjct: 219 -IKILTKPNSKPAGVAFIQYNIVQNAAKAI 247
>gi|426227973|ref|XP_004008089.1| PREDICTED: RNA-binding protein 28 isoform 2 [Ovis aries]
Length = 608
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 138/444 (31%), Positives = 216/444 (48%), Gaps = 40/444 (9%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + +P A+ +++++FS VG V ++ T+ G
Sbjct: 6 LFVGRLPPSARSEQLEELFSQVGPVKQCFV--VTEKG----------------------- 40
Query: 279 NGQKFGKRPIAVDWAVPKNIY--SSGGAAAGVQNKGDG-NSDSGSDDDLGDDDAETASDD 335
R +AVDWAV K+ Y + + G + + + + + G ++ ++D E +
Sbjct: 41 -------RTVAVDWAVAKDKYKNTQSTSVPGEEKRPEPEHQELGQENGREEEDMEEEENG 93
Query: 336 SNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTVNE 395
S+ ++E+ + + V I ++ + K S SDD ++ D + + +
Sbjct: 94 SDYDDEEEEDKGSKLPKPVQIHKRAVKKPAPAESSDEEHSDDDGDLEERDSIDGGEDLAQ 153
Query: 396 SAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF 455
S S+ + K + ++ + T+FI NL FD + E++ + FG++
Sbjct: 154 SDTSSEEQEEEEVSKKKRKKRKLPSDVNEGKTVFIRNLSFDSEEEDLGELLQQFGDLKYV 213
Query: 456 VPVLHQVTKRPKGTGFLKFKTVEAATAAV-SASKTTSGLGIFLKGRQLTVLKALDKKLAH 514
VLH T+ KG F +F T EAA + +AS G G+ L GRQL V A+ + A
Sbjct: 214 RIVLHPDTEHSKGCAFAQFMTQEAAQKCLEAASPEAEGGGLKLDGRQLKVDLAVTRDEAA 273
Query: 515 DKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFH 574
K K T RNLYLA+EGLI GT AAEGVS DM+KR+ K KL+ N
Sbjct: 274 KLRTKKVKKPTGT-RNLYLAREGLIRAGTKAAEGVSAADMAKRERFELLKHQKLKDQNIF 332
Query: 575 VSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYSR 634
VSRTRL ++NLPK++ +K L+KL ++A + IK+ + ++ LK K S
Sbjct: 333 VSRTRLCLHNLPKAVDDKQLRKLLLNATRGEKVVR---IKECRVMRDLKGAYGKIKGQSL 389
Query: 635 GVAFVEFTEHQHALVALRVLNNNP 658
G AF EF EH+HALVALR +NNNP
Sbjct: 390 GYAFAEFQEHEHALVALRHINNNP 413
>gi|357618884|gb|EHJ71687.1| hypothetical protein KGM_12879 [Danaus plexippus]
Length = 728
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 145/451 (32%), Positives = 226/451 (50%), Gaps = 29/451 (6%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+LIIRN+ FKA +K+ F P G + V + D L G AFV F A+ A+
Sbjct: 153 RLIIRNVSFKATEESLKEHFEPYGNILEVKLLKKPDGKLV-GCAFVHFKNVPMAKKALLN 211
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGD-GNSDSGSDDDLGDDDAETASDDS 336
N + F RPI+VDWAVPK+ Y ++ + D +S SDD+L D+
Sbjct: 212 TNMKPFLGRPISVDWAVPKDKYMQHVVNKQLEMQDDVKKEESDSDDELM---------DT 262
Query: 337 NSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTVNES 396
++ K+++ S +D +E D ++ + DD + E+D D V+E
Sbjct: 263 STEVKQEVKSESDSSDENDGEESEADEEEKESDDDEDDEDDENDEDDDDEEDEDGEVDED 322
Query: 397 AKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFV 456
D + K + K + ED T+FI N+PF + ++++K G V +
Sbjct: 323 QDDDDDDEKKDIKPTFQRTKLNDAEDGC--TVFITNIPFMVADDQLKTFAENTGPVKYAL 380
Query: 457 PVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDK 516
+ ++T+ KG+GF+KF E A +S + L+G+ L V AL K+
Sbjct: 381 ICVDKLTEHSKGSGFVKFANKEDAEKFLSLPPEQ----LRLEGQVLGVKPALKKENLQQG 436
Query: 517 EIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVS 576
+K + D+RNLYL KEG++ GT AA GVS DM+KR L K L++ N VS
Sbjct: 437 ----NKKQPKDNRNLYLVKEGVVAAGTRAAVGVSQSDMAKRLALERSKTQMLKNLNRFVS 492
Query: 577 RTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKK--GKVDTKHYSR 634
R RLV+ NL ++T++ L++L + +AS + V+ + + ++ L+ G+ D +H S+
Sbjct: 493 RYRLVVSNLTPNITDQALRRLVL-----KASPARSVVTEARVMRDLRAPVGR-DGRHPSK 546
Query: 635 GVAFVEFTEHQHALVALRVLNNNPSKLFYHH 665
G FV FT H+ AL LR LNNNP H+
Sbjct: 547 GYGFVMFTRHEDALACLRKLNNNPDIFDTHN 577
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+LIIRNI FKA +++ F+ G V V + D L G AFV FT A AI
Sbjct: 23 RLIIRNISFKATEESLREHFAKYGTVEEVKLLKKADGKLV-GCAFVHFTHVPMANKAIAA 81
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDDSN 337
N + F RPI V WAVPK+ Y+ G G K S S D + D +TA +
Sbjct: 82 TNKKPFLGRPIYVSWAVPKHQYN--GEQNGSPTKKRQTSGSSDDVKVEVKDEDTADNQKP 139
Query: 338 SSEKEDLPSN 347
S +K + N
Sbjct: 140 SEDKNKMRVN 149
>gi|328768982|gb|EGF79027.1| hypothetical protein BATDEDRAFT_12759 [Batrachochytrium
dendrobatidis JAM81]
Length = 820
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 138/493 (27%), Positives = 222/493 (45%), Gaps = 93/493 (18%)
Query: 215 QKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESA 274
Q+ +LIIRN+ F K ++++FS G+V + +PH D G ++GF FV+F A+ A
Sbjct: 173 QRARLIIRNLSFNCKPENLQNVFSAFGIVKDCSVPH-LDDGKARGFGFVEFETMDCAQRA 231
Query: 275 IQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASD 334
+Q NG K RP+AVDWA+ K + A +G S ++D + D
Sbjct: 232 LQAVNGTKILNRPVAVDWALAKATFDRLSALPT----AEGEDSSDNEDQVAD-------- 279
Query: 335 DSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTVN 394
A D E+ TT P S ++++ + E + T++
Sbjct: 280 ------------AAQHDNEM------------TTSLKPQNSLHESMMEVDGEDGMEITMD 315
Query: 395 -ESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVV 453
ES++ D ++ + ED+ T+FI NL F+ +E+ FS FG++
Sbjct: 316 DESSEEDDGIEI-----------IMDNEDDADTTLFIRNLSFETTEKELYNAFSTFGKLR 364
Query: 454 SFVPVLHQVTKRPKGTGFLKF-----------KTVEAATAAVSASKTTSGL--GIFLKGR 500
+ + + +GTGF+ F + +A + A+ S+ SG L GR
Sbjct: 365 YAKITMDKTSGLSRGTGFVCFYDEKNTSDCLVEYEKAKSVALLLSQMASGTNPAFMLGGR 424
Query: 501 QLTVLKALDKKLAHDKEID-KSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKR-Q 558
L++ A+ KKLA + D K + D RN+YL +EG+I GT AA+ ++++++ KR
Sbjct: 425 MLSITIAVSKKLAGELTYDSKLRRRAQDKRNMYLMREGVIFAGTEAAKTITEEELLKRTN 484
Query: 559 MLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVV--------------- 603
++K +PN +SRTRL I +L +T+ L+ AV+
Sbjct: 485 SFADRKRILATNPNLFISRTRLSIRSLMPYVTDHELRNTAKHAVIAFWKQVEEGTRQPLE 544
Query: 604 -------------SRASKQKPVIKQIKFLQSLKK-GKVDTKHYSRGVAFVEFTEHQHALV 649
+ K+K I+Q K L + + V K S+G FVEF H AL
Sbjct: 545 PEVVDEELQQGNDAPGIKRKVTIRQAKVLLDMDRLDAVTKKPKSKGYGFVEFNSHADALA 604
Query: 650 ALRVLNNNPSKLF 662
LR LNNNP+
Sbjct: 605 CLRWLNNNPTAFI 617
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 9/103 (8%)
Query: 11 RGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVTQEVQAEDIEK 70
RGFG+V+F M+ A RA++ NGT + R + V A+ +A+ ++ + T E E
Sbjct: 215 RGFGFVEFETMDCAQRALQAVNGTKILNRPVAVDWALAKATFDRLSALPTAEG-----ED 269
Query: 71 TMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKED 113
+ DN+D V A+ H +++ S +KP+ + + D ED
Sbjct: 270 SSDNEDQVADAAQ-HDNEMTTS---LKPQNSLHESMMEVDGED 308
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 12 GFGYVQFAVMEDANRA-VEMKNGTSVGGRKIGVKHAMHRASLEQRRS 57
G GYV FA+ EDA RA VE+K +GGR + +K A+ ++ + QR+S
Sbjct: 109 GCGYVHFALAEDAQRALVELKKQKFMGGRTLKMKIALRKSIVVQRKS 155
>gi|339244733|ref|XP_003378292.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316972816|gb|EFV56463.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 503
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 131/462 (28%), Positives = 217/462 (46%), Gaps = 78/462 (16%)
Query: 215 QKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESA 274
++W+LI+RN+ FKA + I+++F+P G GF FV+F A A
Sbjct: 2 KRWRLILRNLSFKATADAIREVFAPYD-------------GHCAGFGFVQFKTFPAAVQA 48
Query: 275 IQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASD 334
+++ N R +A+DWA+PK+ Y + ++ K +
Sbjct: 49 LRELNATSLLNRIMAIDWALPKDQYLN----LLIKEKQEA-------------------- 84
Query: 335 DSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDK--- 391
N +E V + N+ T + S + +++ +++ N + D+
Sbjct: 85 -----------ENMTMEEMVLRKLESKNEFTQASTSKIKVKNENEVIQENDVDEEDQLQE 133
Query: 392 ------TVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQR 445
S K+S L SK + + EG T+F+ +LPFD+ N+ +K+
Sbjct: 134 ETEIMEEGESSEKISAEDNLQKSKEQKRDPGIEEGR-----TLFVRHLPFDVTNDTLKEY 188
Query: 446 FSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTS-GLGIFLKGRQLTV 504
FS FG + + + T KGTGF++F T EAA + A+ S + + L+V
Sbjct: 189 FSRFGPLKYALVCRYSGTDHSKGTGFIQFLTKEAAQKCLEAANNASESERLCIGNSSLSV 248
Query: 505 LKALDK----KLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQML 560
A+ + +L +K I SK + D+RNL L + + + G+S D KR+ +
Sbjct: 249 CLAVSRSELERLNSEKCI--SKKQPKDNRNLKLLEYCEVKDNC----GMSAKDAEKRKKI 302
Query: 561 HEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQ 620
KL++ N +S TRL ++NLP +++K LKKLC +AV R SK I + + ++
Sbjct: 303 KASNEQKLKNLNIFLSHTRLCVHNLPLKLSDKDLKKLCYEAVSDRKSK----IIECRIMR 358
Query: 621 SLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPSKLF 662
L + +S G AFV+FTEH+HAL L+ LNNNP K+F
Sbjct: 359 DLNRINSSGIAHSLGYAFVQFTEHEHALKCLKALNNNP-KVF 399
>gi|338724222|ref|XP_003364895.1| PREDICTED: RNA-binding protein 28 isoform 2 [Equus caballus]
Length = 627
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 147/472 (31%), Positives = 215/472 (45%), Gaps = 77/472 (16%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + +P A+ +++++FS VG V ++ T+ G
Sbjct: 6 LFVSRLPPSARSEQLEELFSQVGPVKQCFV--VTEKG----------------------- 40
Query: 279 NGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDDSNS 338
R +AVDWAV K+ Y + +A+ G+ D LG ++ +
Sbjct: 41 -------RTVAVDWAVAKDKYKNTQSASA---PGEEKRPEPKDQKLGKENVREEENVGEE 90
Query: 339 SEKEDLPSN-------------------------ADFDEEVDIARKVLNKLTSTTGSLPS 373
+E+E + + + V I ++ + + GS
Sbjct: 91 AEEEGEDEDDMEEEEEEEEEEDEEDEEEEEENKESKVMKAVQIQKRAVKRAAPAEGSEEE 150
Query: 374 LSD------DSALVKGNKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNT 427
SD D + +EQ T E + DV SK K + L E + T
Sbjct: 151 HSDEDGDLEDGESIDSGEEQAQSDTNTEEQEDEDV---QVSKKKKRKLPPDVNEGK---T 204
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV-SA 486
+FI NL FD + EE+ + FG++ VLH T+ KG F +F T EAA + +A
Sbjct: 205 VFIRNLSFDSEEEELGELLQQFGDLKYVCIVLHPDTEHSKGCAFAQFMTQEAAQKCLEAA 264
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
S T G G+ L GRQL V A+ + A + K K T RNLYLA+EGLI GT AA
Sbjct: 265 SPETEGGGLKLDGRQLKVDLAVTRDEAAKLQTKKVKKPTGT-RNLYLAREGLIRAGTKAA 323
Query: 547 EGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRA 606
EGVS DM+KR+ K KL+ N VS+TRL ++NLPK++ +K L+KL ++A
Sbjct: 324 EGVSAADMAKRERFELLKHQKLKDQNIFVSQTRLCLHNLPKAVDDKQLRKLLLNATRGER 383
Query: 607 SKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
+ IK+ + ++ LK K S G AF EF EH+HALVALR +NNNP
Sbjct: 384 GVR---IKECRVMRDLKGVHGKIKGQSLGYAFAEFQEHEHALVALRHINNNP 432
>gi|296210709|ref|XP_002752086.1| PREDICTED: RNA-binding protein 28 isoform 1 [Callithrix jacchus]
Length = 760
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 102/233 (43%), Positives = 134/233 (57%), Gaps = 5/233 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV-S 485
T+FI NL FD D EE+ + FG++ VLH T+ KG F +F T EAA + +
Sbjct: 338 TVFIRNLSFDSDEEELGELLQQFGDLKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLLA 397
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
AS G+ L GRQL V A+ + A + K K T RNLYLA+EGLI GT A
Sbjct: 398 ASPENEAGGLKLGGRQLKVDLAVTRDEAAKLQTKKVKKPTGT-RNLYLAREGLIRAGTKA 456
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS DM+KR+ K KL+ N VSRTRL ++NLPK++ +K L+KL + A
Sbjct: 457 AEGVSAADMAKRERFELLKHQKLKDQNIFVSRTRLCLHNLPKAVDDKQLRKLLLSATRGE 516
Query: 606 ASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
+ IK+ + ++ LK + K S G AF EF EH+HAL ALR +NNNP
Sbjct: 517 KGVR---IKECRVMRDLKGAHGNMKGQSLGYAFAEFQEHEHALKALRHINNNP 566
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV 43
+VT+KGS RGFGYV F+++ED RA +K T+ G KI +
Sbjct: 35 VVTEKGSKTCRGFGYVTFSMLEDVQRA--LKEITTFEGCKINL 75
>gi|344270943|ref|XP_003407301.1| PREDICTED: RNA-binding protein 28 isoform 2 [Loxodonta africana]
Length = 614
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/234 (43%), Positives = 137/234 (58%), Gaps = 7/234 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T+FI NL FD + E++ + FG++ VLH T+ KG F++F T EAA ++A
Sbjct: 191 TVFIRNLSFDSEEEDLGELLQQFGDLKYVRIVLHPDTEHSKGCAFVQFLTQEAAQKCLAA 250
Query: 487 -SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
S T G G+ L GRQL V A+ + A + K K T RNLYLA+EGLI GT A
Sbjct: 251 ASPETEGGGLKLDGRQLKVDLAVTRDEAAKLQTKKVKKPTGT-RNLYLAREGLIRAGTKA 309
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS DM+KR+ K KL+ N VS+TRL ++NLPK++ ++ L+KL + A
Sbjct: 310 AEGVSAADMAKRERFELLKHQKLKDQNIFVSQTRLCLHNLPKAVDDQQLRKLLLSATRG- 368
Query: 606 ASKQKPV-IKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
QK V IK+ + ++ LK K S G AF EF H+HAL ALR +NNNP
Sbjct: 369 ---QKGVRIKECRVMRDLKGAHGKVKGQSLGYAFAEFQAHEHALTALRHINNNP 419
>gi|351705745|gb|EHB08664.1| RNA-binding protein 28 [Heterocephalus glaber]
Length = 758
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/239 (43%), Positives = 135/239 (56%), Gaps = 5/239 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T+FI NL FD + EEV + FG + VLH T+ KG F +F T EA ++A
Sbjct: 335 TVFIRNLSFDSEEEEVGELLQQFGALKYVRIVLHPDTEHSKGCAFAQFMTQEATQKCLAA 394
Query: 487 -SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
S T G G+ L GRQL V A+ + A + K K T RNLYLA+EGLI GT A
Sbjct: 395 ASPETEGGGLKLNGRQLKVDLAVTRDEAAKLQTKKVKKPTGT-RNLYLAREGLIRAGTKA 453
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS DM+KR+ K KL+ N VS+TRL ++NLPK++ +K L+KL ++A
Sbjct: 454 AEGVSAADMAKRERFELLKHQKLKDQNIFVSQTRLCLHNLPKAVDDKQLRKLLLNATRGE 513
Query: 606 ASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPSKLFYH 664
IK+ + ++ LK + K S G AF EF EH+HAL ALR +NNNP H
Sbjct: 514 KGVH---IKECRVMRDLKGVHGNMKGQSLGYAFAEFQEHEHALRALRHINNNPEVFGPH 569
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 5/60 (8%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV---KHAMHRASLEQRRS 57
+VT+KGS RGFGYV F+++ED RA +K T+ G KI + K + S E+R++
Sbjct: 35 VVTEKGSKACRGFGYVTFSMLEDVQRA--LKEITTFEGSKINITVAKKKLRNNSKEKRKN 92
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK- 277
L +RN+P A+ +++++FS VG V ++ + +GF +V F+ D + A+++
Sbjct: 6 LFVRNLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALKEI 65
Query: 278 --FNGQKF 283
F G K
Sbjct: 66 TTFEGSKI 73
>gi|300798746|ref|NP_001178319.1| RNA-binding protein 28 [Bos taurus]
gi|296488281|tpg|DAA30394.1| TPA: RNA binding motif protein 28 isoform 2 [Bos taurus]
Length = 610
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 135/233 (57%), Gaps = 5/233 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV-S 485
T+FI NL FD + E++ + FG++ VLH T+ KG F +F T EAA + +
Sbjct: 187 TVFIRNLSFDSEEEDLGELLQQFGDLKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLEA 246
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
AS G G+ L GRQL V A+ + A K K T RNLYLA+EGLI GT A
Sbjct: 247 ASPEAEGGGLKLDGRQLKVDLAVTRDEAAKLRTKKVKKPTGT-RNLYLAREGLIRAGTKA 305
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS DM+KR+ K KL+ N VSRTRL ++NLPK++ +K L+KL +++
Sbjct: 306 AEGVSAADMAKRERFELLKHQKLKDQNIFVSRTRLCLHNLPKAVDDKQLRKLLLNSTRGE 365
Query: 606 ASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
+ + IK+ + ++ LK K S G AF EF EH+HAL ALR +NNNP
Sbjct: 366 KAVR---IKECRVMRDLKGAYGKIKGQSLGYAFAEFQEHEHALAALRHINNNP 415
>gi|344270941|ref|XP_003407300.1| PREDICTED: RNA-binding protein 28 isoform 1 [Loxodonta africana]
Length = 755
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/234 (43%), Positives = 137/234 (58%), Gaps = 7/234 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T+FI NL FD + E++ + FG++ VLH T+ KG F++F T EAA ++A
Sbjct: 332 TVFIRNLSFDSEEEDLGELLQQFGDLKYVRIVLHPDTEHSKGCAFVQFLTQEAAQKCLAA 391
Query: 487 -SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
S T G G+ L GRQL V A+ + A + K K T RNLYLA+EGLI GT A
Sbjct: 392 ASPETEGGGLKLDGRQLKVDLAVTRDEAAKLQTKKVKKPTGT-RNLYLAREGLIRAGTKA 450
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS DM+KR+ K KL+ N VS+TRL ++NLPK++ ++ L+KL + A
Sbjct: 451 AEGVSAADMAKRERFELLKHQKLKDQNIFVSQTRLCLHNLPKAVDDQQLRKLLLSATRG- 509
Query: 606 ASKQKPV-IKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
QK V IK+ + ++ LK K S G AF EF H+HAL ALR +NNNP
Sbjct: 510 ---QKGVRIKECRVMRDLKGAHGKVKGQSLGYAFAEFQAHEHALTALRHINNNP 560
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV 43
+VT+KGS RGFGYV F+++ED RA + T+ G KI V
Sbjct: 35 VVTEKGSKACRGFGYVTFSMLEDVQRA--LNEITTFEGCKINV 75
>gi|296488280|tpg|DAA30393.1| TPA: RNA binding motif protein 28 isoform 1 [Bos taurus]
Length = 751
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 135/233 (57%), Gaps = 5/233 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV-S 485
T+FI NL FD + E++ + FG++ VLH T+ KG F +F T EAA + +
Sbjct: 328 TVFIRNLSFDSEEEDLGELLQQFGDLKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLEA 387
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
AS G G+ L GRQL V A+ + A K K T RNLYLA+EGLI GT A
Sbjct: 388 ASPEAEGGGLKLDGRQLKVDLAVTRDEAAKLRTKKVKKPTGT-RNLYLAREGLIRAGTKA 446
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS DM+KR+ K KL+ N VSRTRL ++NLPK++ +K L+KL +++
Sbjct: 447 AEGVSAADMAKRERFELLKHQKLKDQNIFVSRTRLCLHNLPKAVDDKQLRKLLLNSTRGE 506
Query: 606 ASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
+ + IK+ + ++ LK K S G AF EF EH+HAL ALR +NNNP
Sbjct: 507 KAVR---IKECRVMRDLKGAYGKIKGQSLGYAFAEFQEHEHALAALRHINNNP 556
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV 43
+VT+KGS RGFGYV F+++ED RA +K T+ G KI V
Sbjct: 35 VVTEKGSKACRGFGYVTFSMVEDVQRA--LKEITTFEGCKINV 75
>gi|291391166|ref|XP_002712118.1| PREDICTED: RNA binding motif protein 28 isoform 3 [Oryctolagus
cuniculus]
Length = 626
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/233 (43%), Positives = 133/233 (57%), Gaps = 5/233 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T+FI NL FD + E++ + FG++ VLH T+ KG F +F T EAA ++A
Sbjct: 202 TVFIRNLSFDSEEEDLGELLQQFGDLKYVRIVLHPDTEHSKGCAFAQFTTQEAAQKCLAA 261
Query: 487 -SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
S G G+ L GRQL V A+ + A K K T RNLYLA+EGLI GT A
Sbjct: 262 ASPEVEGGGLKLDGRQLKVDLAVTRDEAAKLRTKKVKKPTGT-RNLYLAREGLIRAGTKA 320
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS DM+KR+ K KL+ N VSRTRL ++NLPK++ + L+KL + A
Sbjct: 321 AEGVSAADMAKRERFELLKHQKLKDQNIFVSRTRLCLHNLPKAVDDTQLRKLLLSATRGE 380
Query: 606 ASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
+ IK+ + ++ LK K S G AFVEF EH+HAL ALR +NNNP
Sbjct: 381 KGVR---IKECRVMRDLKGAHGAVKGQSLGYAFVEFQEHEHALGALRHINNNP 430
>gi|440907745|gb|ELR57852.1| RNA-binding protein 28 [Bos grunniens mutus]
Length = 751
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 135/233 (57%), Gaps = 5/233 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV-S 485
T+FI NL FD + E++ + FG++ VLH T+ KG F +F T EAA + +
Sbjct: 328 TVFIRNLSFDSEEEDLGELLQQFGDLKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLEA 387
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
AS G G+ L GRQL V A+ + A K K T RNLYLA+EGLI GT A
Sbjct: 388 ASPEAEGGGLKLDGRQLKVDLAVTRDEAAKLRTKKVKKPTGT-RNLYLAREGLIRAGTKA 446
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS DM+KR+ K KL+ N VSRTRL ++NLPK++ +K L+KL +++
Sbjct: 447 AEGVSAADMAKRERFELLKHQKLKDQNIFVSRTRLCLHNLPKAVDDKQLRKLLLNSTRGE 506
Query: 606 ASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
+ + IK+ + ++ LK K S G AF EF EH+HAL ALR +NNNP
Sbjct: 507 KAVR---IKECRVMRDLKGAYGKIKGQSLGYAFAEFQEHEHALAALRHINNNP 556
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV 43
+VT+KGS RGFGYV F+++ED RA +K T+ G KI V
Sbjct: 35 VVTEKGSKACRGFGYVTFSMVEDVQRA--LKEITTFEGCKINV 75
>gi|291391162|ref|XP_002712116.1| PREDICTED: RNA binding motif protein 28 isoform 1 [Oryctolagus
cuniculus]
Length = 767
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/233 (43%), Positives = 133/233 (57%), Gaps = 5/233 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T+FI NL FD + E++ + FG++ VLH T+ KG F +F T EAA ++A
Sbjct: 343 TVFIRNLSFDSEEEDLGELLQQFGDLKYVRIVLHPDTEHSKGCAFAQFTTQEAAQKCLAA 402
Query: 487 -SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
S G G+ L GRQL V A+ + A K K T RNLYLA+EGLI GT A
Sbjct: 403 ASPEVEGGGLKLDGRQLKVDLAVTRDEAAKLRTKKVKKPTGT-RNLYLAREGLIRAGTKA 461
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS DM+KR+ K KL+ N VSRTRL ++NLPK++ + L+KL + A
Sbjct: 462 AEGVSAADMAKRERFELLKHQKLKDQNIFVSRTRLCLHNLPKAVDDTQLRKLLLSATRGE 521
Query: 606 ASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
+ IK+ + ++ LK K S G AFVEF EH+HAL ALR +NNNP
Sbjct: 522 KGVR---IKECRVMRDLKGAHGAVKGQSLGYAFVEFQEHEHALGALRHINNNP 571
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV 43
+VT+KGS RGFGYV F++ ED RA +K T+ G KI V
Sbjct: 35 VVTEKGSKSCRGFGYVTFSMPEDVQRA--LKEITTFEGHKINV 75
>gi|395833588|ref|XP_003789808.1| PREDICTED: RNA-binding protein 28 [Otolemur garnettii]
Length = 762
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 99/233 (42%), Positives = 136/233 (58%), Gaps = 5/233 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T+FI NL FD + E++ + FG++ V H T+ KG F +F T EAA +SA
Sbjct: 341 TVFIRNLSFDSEEEDLGELLQQFGDLKYVRIVSHPDTEHSKGCAFAQFMTQEAAQKCLSA 400
Query: 487 -SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
S G G+ L GRQL + A+ + A + K K T RNLYLA+EGLI GT A
Sbjct: 401 ASAENEGGGLKLDGRQLKIDLAVTRDEAAKLQTKKVKKPTGT-RNLYLAREGLIRAGTKA 459
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS DM+KR+ K KL+ N VS+TRL ++NLPK++ ++ L+KL +DA
Sbjct: 460 AEGVSAADMAKRERFELLKHQKLKDQNIFVSQTRLCLHNLPKALDDRQLRKLLLDATRGE 519
Query: 606 ASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
+ IK+ + ++ LK +TK S G AF +F EH+HAL ALR +NNNP
Sbjct: 520 KGVR---IKECRVMRDLKGVHGNTKGQSLGYAFADFQEHEHALRALRHINNNP 569
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 22/28 (78%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAV 28
+VT+KGS RGFGYV F+++ED RA+
Sbjct: 35 VVTEKGSKACRGFGYVTFSMLEDVQRAL 62
>gi|432091266|gb|ELK24470.1| RNA-binding protein 28 [Myotis davidii]
Length = 762
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/233 (44%), Positives = 135/233 (57%), Gaps = 5/233 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T+FI NL FD + EE+ + FG++ VLH T+ KG F +F T EAA ++A
Sbjct: 339 TVFIRNLSFDSEEEELGELLQQFGDLKYVCIVLHPDTEHSKGCAFAQFMTQEAAQKCLAA 398
Query: 487 -SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
S T G G+ L GRQL V A+ + A K K T RNLYLA+EGLI GT A
Sbjct: 399 ASPETEGGGLKLDGRQLKVDLAVTRDEAAKLRTKKVKKPTGT-RNLYLAREGLIRAGTKA 457
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS DM+KR+ K KL+ N VSRTRL ++NLPK++ +K L+KL ++A
Sbjct: 458 AEGVSAADMAKRERFELLKHQKLKDQNIFVSRTRLCLHNLPKAVDDKQLRKLLLNATRGE 517
Query: 606 ASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
+ IK+ K ++ LK K S G AF EF EH+HAL ALR +NNNP
Sbjct: 518 KGVR---IKECKVMRDLKGVYGKIKGQSLGYAFAEFQEHEHALTALRHINNNP 567
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV 43
+VT+KGS RGFGYV F++ ED RA +K T+ G KI V
Sbjct: 35 VVTEKGSKACRGFGYVTFSMREDVQRA--LKEITTFEGCKINV 75
>gi|296423589|ref|XP_002841336.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637573|emb|CAZ85527.1| unnamed protein product [Tuber melanosporum]
Length = 732
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 156/525 (29%), Positives = 239/525 (45%), Gaps = 109/525 (20%)
Query: 192 LHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNE-IKDMFSPVGLVWNVYIPH 250
L + E+K G + + GEG K + +LI+RN+P+ K E + +F G V V IP
Sbjct: 132 LSEGEVKKG----KTVDGEGVKKRAPRLIVRNLPWSVKKPEDLVKIFQSYGKVRGVIIPR 187
Query: 251 --NTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGV 308
N G GFAFV ++AE+AI+K NG + R +AVDWA KN + A +
Sbjct: 188 KGNMPNGPMSGFAFVTMKGYKNAENAIEKTNGMEIDGRTVAVDWAAEKNEWEQKKEAEDM 247
Query: 309 QNKGDGNSDSGSDDDLGDDDAETASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTT 368
GD +++ G+D AE +S E + D D E
Sbjct: 248 DIDGD-------EEEKGEDAAE------DSDEGSGVGVIGDDDAE--------------- 279
Query: 369 GSLPSLSDDSALVKGNKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTI 428
S+ + SD S SD+ + D + N ++ K S+ E+E T+
Sbjct: 280 -SMDNASDAS----------SDEGSDIEDFDDDEDERNGTQKKFYSV-----EEEKSLTV 323
Query: 429 FICNLPFDLDNEEVKQRF-SAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVE--------A 479
FI NLPF D+E + + F S+FG V V+ T+RP+GTGF+ F E A
Sbjct: 324 FIRNLPFSTDDETLHEHFKSSFGPVRYARIVMDHATERPRGTGFVCFFNKEDCDRCLADA 383
Query: 480 ATAAVSASKTTSGL--------GIF-LKGRQLTVLKALDKKLA---HDKEIDKSKNETND 527
A+K S L G + + GR L + +A++K A + + + D
Sbjct: 384 PHQQFLATKGKSLLQNEGDDPSGRYTIDGRILQLTRAVNKAEATKLQEAGLAQRDKAQGD 443
Query: 528 HRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQS-PNFHVSRTRLVIYNLP 586
R L+L +EG IL +PA + +S+ + R+ +++ T LQS P H+S TRL I NLP
Sbjct: 444 KRRLFLLQEGTILASSPAFQQLSNSERLLREASLKQRKTLLQSNPMLHLSLTRLSIRNLP 503
Query: 587 KSMTEKGLKKLCIDAVVS-------------------------------RASKQKPVIKQ 615
+S+T K LK+L +A V R ++ K +++Q
Sbjct: 504 RSITAKDLKQLAREAAVGFAADAKAGKRKRLSKEELIRGGDEDREAERRRKAQGKGIVRQ 563
Query: 616 IKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPSK 660
KF++ K G SRG F+E++ H+ AL+ +R LN + K
Sbjct: 564 AKFVEE-KAG----AGRSRGYGFIEYSSHRWALMGIRWLNGHEGK 603
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q G E ++ + IR++P+ A + FS + + + + + T S+GF FV F
Sbjct: 36 QDGAEDDTLKRRTVFIRSLPYTATTESLSTHFSFIAPLKHATVVADPVTKKSRGFGFVTF 95
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWA 293
DA+ A+++FNG +FG R + V+ A
Sbjct: 96 LDPEDAQKAVKQFNGAEFGGRRLKVEIA 123
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Query: 2 VTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHR 49
VTKK RGFG+V F EDA +AV+ NG GGR++ V+ A R
Sbjct: 83 VTKK----SRGFGFVTFLDPEDAQKAVKQFNGAEFGGRRLKVEIAEKR 126
>gi|354470659|ref|XP_003497562.1| PREDICTED: RNA-binding protein 28 isoform 3 [Cricetulus griseus]
Length = 761
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/233 (42%), Positives = 137/233 (58%), Gaps = 5/233 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T+FI NL F+ + E++ + FG++ VLH T+ KG GF +F T EAA ++A
Sbjct: 339 TVFIRNLSFESEEEDLGEVLQQFGDLKYVRIVLHPDTEHSKGCGFAQFMTQEAAQKCLAA 398
Query: 487 -SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
S G G+ L GR L + A+ + A + K K T RNLYLA+EGLI GT A
Sbjct: 399 ASPEAEGGGLKLDGRLLKIDLAVTRDEAAKLQTKKVKKPTGT-RNLYLAREGLIRAGTKA 457
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS DM+KR+ K KL++ N VS+TRL ++NLPK++ +K L+KL +DA
Sbjct: 458 AEGVSAADMAKRERFELLKHQKLKNQNIFVSQTRLCLHNLPKAVDDKQLRKLLLDATRGE 517
Query: 606 ASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
+ IK+ + ++ LK TK S G AF EF +H+HAL ALR +NNNP
Sbjct: 518 KGVR---IKECRVMRDLKAVHGKTKGQSLGYAFAEFQKHEHALRALRHINNNP 567
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV 43
+VT+KGS RGFGYV F+++ED RA +K T+ G KI V
Sbjct: 35 VVTEKGSKACRGFGYVTFSMLEDVQRA--LKEITTFEGCKINV 75
>gi|448088433|ref|XP_004196543.1| Piso0_003765 [Millerozyma farinosa CBS 7064]
gi|448092564|ref|XP_004197574.1| Piso0_003765 [Millerozyma farinosa CBS 7064]
gi|359377965|emb|CCE84224.1| Piso0_003765 [Millerozyma farinosa CBS 7064]
gi|359378996|emb|CCE83193.1| Piso0_003765 [Millerozyma farinosa CBS 7064]
Length = 751
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 145/511 (28%), Positives = 235/511 (45%), Gaps = 110/511 (21%)
Query: 215 QKWKLIIRNIPFKAK-VNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAES 273
++ +LIIRN+P+ K E+K +FS G V++ YIP G GFAFV + AE
Sbjct: 126 RRARLIIRNLPWSCKNAEELKPLFSKYGAVFDAYIPRKK-GGRMCGFAFVVMKKQSAAEK 184
Query: 274 AIQKFNGQKFGKRPIAVDWAVPKNIYSS--------------GGAAAGVQNKGDGNSDSG 319
A+++ G K R +AVD+AV K+ + A + + + +SD G
Sbjct: 185 AVKESVGLKIHGREVAVDFAVEKSKWEEIKETEAENDESESEDEEDANEKQEKETSSDDG 244
Query: 320 SDDDLGDDDAETASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSA 379
S+DD + + +S D S ++ E++DI +D+ +
Sbjct: 245 SEDDASNMSDASEDSSDDSDSDSDAESGSE-SEDIDIE-----------------NDNGS 286
Query: 380 LVKGNKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDN 439
+G++E S K ++ L+ KPK KQ D T+F+ NLP+D
Sbjct: 287 ESEGDEE---------SQKAAEKENLD----KPKKNKQ----DPF--TVFVRNLPYDATK 327
Query: 440 EEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFL-- 497
E +K+ FS FG V +PV+ + T KGT F+ F E+ + + + +TS + +
Sbjct: 328 ETLKEHFSRFGPVKYALPVIEKSTNLAKGTAFVSFYKEESYISCIENAPSTSANSLLISD 387
Query: 498 --------KGRQLTVLKALDKKLAH---DKEIDKSKNET------NDHRNLYLAKEGLIL 540
+GR L+V ++D++ AH ++ + K K T D RNL+L EG I
Sbjct: 388 DVSSDYVFQGRVLSVTPSVDRESAHKLAERNLSKRKEITGKAPGEKDKRNLFLLNEGRIT 447
Query: 541 EGTPAAEGVSDDDMSKRQMLHEKKMTKL-QSPNFHVSRTRLVIYNLPKSMTEKGLKKLCI 599
E + A ++ DM R+ ++ ++ +L ++P H+S TRL I NLP++M K LK L
Sbjct: 448 ENSKLASFIAKSDMELREKSYQLRVQQLKKNPTLHLSLTRLAIRNLPRAMNSKSLKALGR 507
Query: 600 DAVVSRASKQKP-----------------------------------VIKQIKFLQSLKK 624
AVVS AS+ K V++Q K ++ +K
Sbjct: 508 KAVVSFASEVKEEKRHALSKEEIDRSTKHKKEAEELQVSKKKSKNAGVVRQAKVIKEVKG 567
Query: 625 GKVDTKHYSRGVAFVEFTEHQHALVALRVLN 655
+ SRG F+E+ +H+ AL+ LR LN
Sbjct: 568 AGEAGR--SRGYGFIEYRDHKSALMGLRWLN 596
>gi|410907429|ref|XP_003967194.1| PREDICTED: RNA-binding protein 28-like [Takifugu rubripes]
Length = 718
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/234 (42%), Positives = 140/234 (59%), Gaps = 5/234 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
TIFI NL FD + E++++ FGE+ V+ T+ KG F +F++ E+A ++A
Sbjct: 284 TIFIRNLSFDTEEEDLEKVLLQFGELKYVKIVMQPETEHSKGCAFAQFRSKESADQCIAA 343
Query: 487 SKTTSGLG-IFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
++ S G I + GR+L ++ A+ K+ A +++K K ET RNLYLA+EGLI GT A
Sbjct: 344 AQDESECGGIRVDGRKLFIVTAVSKEDAVKMKVNKVKVETGT-RNLYLAREGLIRAGTKA 402
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS+ DM KR E K KL+ N +VS+TRL I+NLPKS+ K LK LC+ AV
Sbjct: 403 AEGVSETDMIKRTRFEELKRAKLRDLNVYVSKTRLCIHNLPKSVDSKKLKALCLQAV--- 459
Query: 606 ASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPS 659
+ + + + + K K S G FV+F EH+HAL ALR LNNNP+
Sbjct: 460 KGNKGVFVNESRVMYDKKPLKGQVMGQSLGYGFVQFKEHEHALGALRYLNNNPN 513
>gi|297681431|ref|XP_002818458.1| PREDICTED: RNA-binding protein 28 isoform 2 [Pongo abelii]
Length = 616
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/234 (44%), Positives = 138/234 (58%), Gaps = 7/234 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV-S 485
T+FI NL FD + EE+ + FGE+ VLH T+ KG F +F T EAA + +
Sbjct: 193 TVFIRNLSFDSEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLLA 252
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
AS G+ L GRQL V A+ + A + K K T RNLYLA+EGLI GT A
Sbjct: 253 ASPENEAGGLKLDGRQLKVDLAVTRDEAAKLQTTKVKKPTGT-RNLYLAREGLIRAGTKA 311
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS DM+KR+ K KL+ N VSRTRL ++NLPK++ +K L+KL + A
Sbjct: 312 AEGVSAADMAKRERFELLKHQKLKDQNIFVSRTRLCLHNLPKAVDDKQLRKLLLSAT--- 368
Query: 606 ASKQKPV-IKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
S +K V IK+ + ++ LK + K S G AF EF EH+HAL ALR++NNNP
Sbjct: 369 -SGEKGVRIKECRVMRDLKGVHGNMKGQSLGYAFAEFQEHEHALKALRLINNNP 421
>gi|332224373|ref|XP_003261341.1| PREDICTED: RNA-binding protein 28 isoform 2 [Nomascus leucogenys]
Length = 622
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/234 (44%), Positives = 138/234 (58%), Gaps = 7/234 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV-S 485
T+FI NL FD + EE+ + FGE+ VLH T+ KG F +F T EAA + +
Sbjct: 199 TVFIRNLSFDSEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFTTQEAAQKCLLA 258
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
AS G+ L GRQL V A+ + A + K K T RNLYLA+EGLI GT A
Sbjct: 259 ASPENEAGGLKLDGRQLKVDLAVTRDEAAKLQTTKVKKPTGT-RNLYLAREGLIRAGTKA 317
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS DM+KR+ K KL+ N VSRTRL ++NLPK++ +K L+KL + A
Sbjct: 318 AEGVSAADMAKRERFELLKHQKLKDQNIFVSRTRLCLHNLPKAVDDKQLRKLLLSAT--- 374
Query: 606 ASKQKPV-IKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
S +K V IK+ + ++ LK + K S G AF EF EH+HAL ALR++NNNP
Sbjct: 375 -SGEKGVRIKECRVMRDLKGVHGNMKGQSLGYAFAEFQEHEHALKALRLINNNP 427
>gi|397468868|ref|XP_003806092.1| PREDICTED: RNA-binding protein 28 isoform 2 [Pan paniscus]
Length = 620
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/234 (44%), Positives = 138/234 (58%), Gaps = 7/234 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV-S 485
T+FI NL FD + EE+ + FGE+ VLH T+ KG F +F T EAA + +
Sbjct: 197 TVFIRNLSFDSEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLLA 256
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
AS G+ L GRQL V A+ + A + K K T RNLYLA+EGLI GT A
Sbjct: 257 ASPENEAGGLKLDGRQLKVDLAVTRDEAAKLQTTKVKKPTGT-RNLYLAREGLIRAGTKA 315
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS DM+KR+ K KL+ N VSRTRL ++NLPK++ +K L+KL + A
Sbjct: 316 AEGVSAADMAKRERFELLKHQKLKDQNIFVSRTRLCLHNLPKAVDDKQLRKLLLSAT--- 372
Query: 606 ASKQKPV-IKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
S +K V IK+ + ++ LK + K S G AF EF EH+HAL ALR++NNNP
Sbjct: 373 -SGEKGVRIKECRVMRDLKGVHGNMKGRSLGYAFAEFQEHEHALKALRLINNNP 425
>gi|332868681|ref|XP_003318811.1| PREDICTED: RNA-binding protein 28 [Pan troglodytes]
Length = 620
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/234 (44%), Positives = 138/234 (58%), Gaps = 7/234 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV-S 485
T+FI NL FD + EE+ + FGE+ VLH T+ KG F +F T EAA + +
Sbjct: 197 TVFIRNLSFDSEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLLA 256
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
AS G+ L GRQL V A+ + A + K K T RNLYLA+EGLI GT A
Sbjct: 257 ASPENEAGGLKLDGRQLKVDLAVTRDEAAKLQTTKVKKPTGT-RNLYLAREGLIRAGTKA 315
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS DM+KR+ K KL+ N VSRTRL ++NLPK++ +K L+KL + A
Sbjct: 316 AEGVSAADMAKRERFELLKHQKLKDQNIFVSRTRLCLHNLPKAVDDKQLRKLLLSAT--- 372
Query: 606 ASKQKPV-IKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
S +K V IK+ + ++ LK + K S G AF EF EH+HAL ALR++NNNP
Sbjct: 373 -SGEKGVRIKECRVMRDLKGVHGNMKGQSLGYAFAEFQEHEHALKALRLINNNP 425
>gi|260898763|ref|NP_001159607.1| RNA-binding protein 28 isoform 2 [Homo sapiens]
Length = 618
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/234 (44%), Positives = 138/234 (58%), Gaps = 7/234 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV-S 485
T+FI NL FD + EE+ + FGE+ VLH T+ KG F +F T EAA + +
Sbjct: 195 TVFIRNLSFDSEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLLA 254
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
AS G+ L GRQL V A+ + A + K K T RNLYLA+EGLI GT A
Sbjct: 255 ASPENEAGGLKLDGRQLKVDLAVTRDEAAKLQTTKVKKPTGT-RNLYLAREGLIRAGTKA 313
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS DM+KR+ K KL+ N VSRTRL ++NLPK++ +K L+KL + A
Sbjct: 314 AEGVSAADMAKRERFELLKHQKLKDQNIFVSRTRLCLHNLPKAVDDKQLRKLLLSAT--- 370
Query: 606 ASKQKPV-IKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
S +K V IK+ + ++ LK + K S G AF EF EH+HAL ALR++NNNP
Sbjct: 371 -SGEKGVRIKECRVMRDLKGVHGNMKGQSLGYAFAEFQEHEHALKALRLINNNP 423
>gi|62896991|dbj|BAD96436.1| RNA binding motif protein 28 variant [Homo sapiens]
Length = 759
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/234 (44%), Positives = 138/234 (58%), Gaps = 7/234 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV-S 485
T+FI NL FD + EE+ + FGE+ VLH T+ KG F +F T EAA + +
Sbjct: 336 TVFIRNLSFDSEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLLA 395
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
AS G+ L GRQL V A+ + A + K K T RNLYLA+EGLI GT A
Sbjct: 396 ASPENEAGGLKLDGRQLKVDLAVTRDEAAKLQTTKVKKPTGT-RNLYLAREGLIRAGTKA 454
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS DM+KR+ K KL+ N VSRTRL ++NLPK++ +K L+KL + A
Sbjct: 455 AEGVSAADMAKRERFELLKHQKLKDQNIFVSRTRLCLHNLPKAVDDKQLRKLLLSAT--- 511
Query: 606 ASKQKPV-IKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
S +K V IK+ + ++ LK + K S G AF EF EH+HAL ALR++NNNP
Sbjct: 512 -SGEKGVRIKECRVMRDLKGVHGNMKGQSLGYAFAEFQEHEHALKALRLINNNP 564
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV 43
+VT+KGS RGFGYV F+++ED RA +K T+ G KI V
Sbjct: 35 VVTEKGSKACRGFGYVTFSMLEDVQRA--LKEITTFEGCKINV 75
>gi|332224371|ref|XP_003261340.1| PREDICTED: RNA-binding protein 28 isoform 1 [Nomascus leucogenys]
Length = 763
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/234 (44%), Positives = 138/234 (58%), Gaps = 7/234 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV-S 485
T+FI NL FD + EE+ + FGE+ VLH T+ KG F +F T EAA + +
Sbjct: 340 TVFIRNLSFDSEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFTTQEAAQKCLLA 399
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
AS G+ L GRQL V A+ + A + K K T RNLYLA+EGLI GT A
Sbjct: 400 ASPENEAGGLKLDGRQLKVDLAVTRDEAAKLQTTKVKKPTGT-RNLYLAREGLIRAGTKA 458
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS DM+KR+ K KL+ N VSRTRL ++NLPK++ +K L+KL + A
Sbjct: 459 AEGVSAADMAKRERFELLKHQKLKDQNIFVSRTRLCLHNLPKAVDDKQLRKLLLSAT--- 515
Query: 606 ASKQKPV-IKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
S +K V IK+ + ++ LK + K S G AF EF EH+HAL ALR++NNNP
Sbjct: 516 -SGEKGVRIKECRVMRDLKGVHGNMKGQSLGYAFAEFQEHEHALKALRLINNNP 568
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 7/69 (10%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
+VT+KGS RGFGYV F+++ED RA +K T+ G KI V A + R+K
Sbjct: 35 VVTEKGSKACRGFGYVTFSMLEDVQRA--LKEITTFEGCKINVTVAKKKL-----RNKTK 87
Query: 61 QEVQAEDIE 69
++V+ E+ E
Sbjct: 88 EKVKNENSE 96
>gi|397468866|ref|XP_003806091.1| PREDICTED: RNA-binding protein 28 isoform 1 [Pan paniscus]
Length = 761
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/234 (44%), Positives = 138/234 (58%), Gaps = 7/234 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV-S 485
T+FI NL FD + EE+ + FGE+ VLH T+ KG F +F T EAA + +
Sbjct: 338 TVFIRNLSFDSEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLLA 397
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
AS G+ L GRQL V A+ + A + K K T RNLYLA+EGLI GT A
Sbjct: 398 ASPENEAGGLKLDGRQLKVDLAVTRDEAAKLQTTKVKKPTGT-RNLYLAREGLIRAGTKA 456
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS DM+KR+ K KL+ N VSRTRL ++NLPK++ +K L+KL + A
Sbjct: 457 AEGVSAADMAKRERFELLKHQKLKDQNIFVSRTRLCLHNLPKAVDDKQLRKLLLSAT--- 513
Query: 606 ASKQKPV-IKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
S +K V IK+ + ++ LK + K S G AF EF EH+HAL ALR++NNNP
Sbjct: 514 -SGEKGVRIKECRVMRDLKGVHGNMKGRSLGYAFAEFQEHEHALKALRLINNNP 566
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV 43
+VT+KGS RGFGYV F+++ED RA +K T+ G KI V
Sbjct: 35 VVTEKGSKACRGFGYVTFSMLEDVQRA--LKEITTFEGCKINV 75
>gi|114615813|ref|XP_001152135.1| PREDICTED: RNA-binding protein 28 isoform 5 [Pan troglodytes]
gi|410207702|gb|JAA01070.1| RNA binding motif protein 28 [Pan troglodytes]
gi|410254888|gb|JAA15411.1| RNA binding motif protein 28 [Pan troglodytes]
gi|410295816|gb|JAA26508.1| RNA binding motif protein 28 [Pan troglodytes]
Length = 761
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/234 (44%), Positives = 138/234 (58%), Gaps = 7/234 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV-S 485
T+FI NL FD + EE+ + FGE+ VLH T+ KG F +F T EAA + +
Sbjct: 338 TVFIRNLSFDSEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLLA 397
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
AS G+ L GRQL V A+ + A + K K T RNLYLA+EGLI GT A
Sbjct: 398 ASPENEAGGLKLDGRQLKVDLAVTRDEAAKLQTTKVKKPTGT-RNLYLAREGLIRAGTKA 456
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS DM+KR+ K KL+ N VSRTRL ++NLPK++ +K L+KL + A
Sbjct: 457 AEGVSAADMAKRERFELLKHQKLKDQNIFVSRTRLCLHNLPKAVDDKQLRKLLLSAT--- 513
Query: 606 ASKQKPV-IKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
S +K V IK+ + ++ LK + K S G AF EF EH+HAL ALR++NNNP
Sbjct: 514 -SGEKGVRIKECRVMRDLKGVHGNMKGQSLGYAFAEFQEHEHALKALRLINNNP 566
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV 43
+VT+KGS RGFGYV F+++ED RA +K T+ G KI V
Sbjct: 35 VVTEKGSKACRGFGYVTFSMLEDVQRA--LKEITTFEGCKINV 75
>gi|187960109|ref|NP_060547.2| RNA-binding protein 28 isoform 1 [Homo sapiens]
gi|55976611|sp|Q9NW13.3|RBM28_HUMAN RecName: Full=RNA-binding protein 28; AltName: Full=RNA-binding
motif protein 28
gi|15530220|gb|AAH13889.1| RNA binding motif protein 28 [Homo sapiens]
gi|51095071|gb|EAL24314.1| RNA binding motif protein 28 [Homo sapiens]
gi|119604049|gb|EAW83643.1| RNA binding motif protein 28, isoform CRA_a [Homo sapiens]
gi|119604050|gb|EAW83644.1| RNA binding motif protein 28, isoform CRA_a [Homo sapiens]
Length = 759
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/234 (44%), Positives = 138/234 (58%), Gaps = 7/234 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV-S 485
T+FI NL FD + EE+ + FGE+ VLH T+ KG F +F T EAA + +
Sbjct: 336 TVFIRNLSFDSEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLLA 395
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
AS G+ L GRQL V A+ + A + K K T RNLYLA+EGLI GT A
Sbjct: 396 ASPENEAGGLKLDGRQLKVDLAVTRDEAAKLQTTKVKKPTGT-RNLYLAREGLIRAGTKA 454
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS DM+KR+ K KL+ N VSRTRL ++NLPK++ +K L+KL + A
Sbjct: 455 AEGVSAADMAKRERFELLKHQKLKDQNIFVSRTRLCLHNLPKAVDDKQLRKLLLSAT--- 511
Query: 606 ASKQKPV-IKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
S +K V IK+ + ++ LK + K S G AF EF EH+HAL ALR++NNNP
Sbjct: 512 -SGEKGVRIKECRVMRDLKGVHGNMKGQSLGYAFAEFQEHEHALKALRLINNNP 564
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV 43
+VT+KGS RGFGYV F+++ED RA +K T+ G KI V
Sbjct: 35 VVTEKGSKACRGFGYVTFSMLEDVQRA--LKEITTFEGCKINV 75
>gi|7022371|dbj|BAA91575.1| unnamed protein product [Homo sapiens]
Length = 759
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/234 (44%), Positives = 138/234 (58%), Gaps = 7/234 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV-S 485
T+FI NL FD + EE+ + FGE+ VLH T+ KG F +F T EAA + +
Sbjct: 336 TVFIRNLSFDSEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLLA 395
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
AS G+ L GRQL V A+ + A + K K T RNLYLA+EGLI GT A
Sbjct: 396 ASPENEAGGLKLDGRQLKVDLAVTRDEAAKLQTTKVKKPTGT-RNLYLAREGLIRAGTKA 454
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS DM+KR+ K KL+ N VSRTRL ++NLPK++ +K L+KL + A
Sbjct: 455 AEGVSAADMAKRERFELLKHQKLKDQNIFVSRTRLCLHNLPKAVDDKQLRKLLLSAT--- 511
Query: 606 ASKQKPV-IKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
S +K V IK+ + ++ LK + K S G AF EF EH+HAL ALR++NNNP
Sbjct: 512 -SGEKGVRIKECRVMRDLKGVHGNMKGQSLGYAFAEFQEHEHALKALRLINNNP 564
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV 43
+VT+KGS RGFGYV F+++ED RA +K T+ G KI V
Sbjct: 35 VVTEKGSKACRGFGYVTFSMLEDVQRA--LKEITTFEGCKINV 75
>gi|426357780|ref|XP_004046210.1| PREDICTED: RNA-binding protein 28 [Gorilla gorilla gorilla]
Length = 723
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/234 (44%), Positives = 138/234 (58%), Gaps = 7/234 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAA-TAAVS 485
T+FI NL FD + EE+ + FGE+ VLH T+ KG F +F T EAA ++
Sbjct: 300 TVFIRNLSFDSEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEAAQNCLLA 359
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
AS G+ L GRQL V A+ + A + K K T RNLYLA+EGLI GT A
Sbjct: 360 ASPENEAGGLKLDGRQLKVDLAVTRDEAAKLQTTKVKKPTGT-RNLYLAREGLIRAGTKA 418
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS DM+KR+ K KL+ N VSRTRL ++NLPK++ +K L+KL + A
Sbjct: 419 AEGVSAADMAKRERFELLKHQKLKDQNIFVSRTRLCLHNLPKAVDDKQLRKLLLSAT--- 475
Query: 606 ASKQKPV-IKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
S +K V IK+ + ++ LK + K S G AF EF EH+HAL ALR++NNNP
Sbjct: 476 -SGEKGVRIKECRVMRDLKGVHGNMKGQSLGYAFAEFQEHEHALKALRLINNNP 528
>gi|194373803|dbj|BAG62214.1| unnamed protein product [Homo sapiens]
Length = 618
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 105/234 (44%), Positives = 137/234 (58%), Gaps = 7/234 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV-S 485
T+FI NL FD + EE+ + FGE VLH T+ KG F +F T EAA + +
Sbjct: 195 TVFIRNLSFDSEEEELGELLQQFGEPKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLLA 254
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
AS G+ L GRQL V A+ + A + K K T RNLYLA+EGLI GT A
Sbjct: 255 ASPENEAGGLKLDGRQLKVDLAVTRDEAAKLQTTKVKKPTGT-RNLYLAREGLIRAGTKA 313
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS DM+KR+ K KL+ N VSRTRL ++NLPK++ +K L+KL + A
Sbjct: 314 AEGVSAADMAKRERFELLKHQKLKDQNIFVSRTRLCLHNLPKAVDDKQLRKLLLSAT--- 370
Query: 606 ASKQKPV-IKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
S +K V IK+ + ++ LK + K S G AF EF EH+HAL ALR++NNNP
Sbjct: 371 -SGEKGVRIKECRVMRDLKGVHGNMKGQSLGYAFAEFQEHEHALKALRLINNNP 423
>gi|17390870|gb|AAH18373.1| RNA binding motif protein 28 [Mus musculus]
Length = 575
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 99/233 (42%), Positives = 134/233 (57%), Gaps = 5/233 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T+FI NL FD + E + + FG++ VLH T+ KG F +F T EAA ++A
Sbjct: 151 TVFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAA 210
Query: 487 -SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
S G G+ L GRQL V A+ + A + K K T RNLYLA+EGLI GT A
Sbjct: 211 ASLEAEGGGLKLDGRQLKVDLAVTRDEAAKLQTKKVKKPTGT-RNLYLAREGLIRAGTKA 269
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS DM+KR+ K KL++ N VS+TRL ++NLPK++ +K L+KL ++A
Sbjct: 270 AEGVSAADMAKRERFELLKHQKLKNQNIFVSQTRLCLHNLPKAVDDKQLRKLLLEATRGE 329
Query: 606 ASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
+ IK+ + ++ LK K S G AF EF +H+HAL ALR NNNP
Sbjct: 330 KGVR---IKECRVMRDLKGVHGKMKGQSLGYAFAEFQKHEHALRALRHFNNNP 379
>gi|148681845|gb|EDL13792.1| RNA binding motif protein 28, isoform CRA_a [Mus musculus]
Length = 500
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 99/233 (42%), Positives = 134/233 (57%), Gaps = 5/233 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T+FI NL FD + E + + FG++ VLH T+ KG F +F T EAA ++A
Sbjct: 76 TVFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAA 135
Query: 487 -SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
S G G+ L GRQL V A+ + A + K K T RNLYLA+EGLI GT A
Sbjct: 136 ASLEAEGGGLKLDGRQLKVDLAVTRDEAAKLQTKKVKKPTGT-RNLYLAREGLIRAGTKA 194
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS DM+KR+ K KL++ N VS+TRL ++NLPK++ +K L+KL ++A
Sbjct: 195 AEGVSAADMAKRERFELLKHQKLKNQNIFVSQTRLCLHNLPKAVDDKQLRKLLLEATRGE 254
Query: 606 ASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
+ IK+ + ++ LK K S G AF EF +H+HAL ALR NNNP
Sbjct: 255 KGVR---IKECRVMRDLKGVHGKMKGQSLGYAFAEFQKHEHALRALRHFNNNP 304
>gi|402864716|ref|XP_003896597.1| PREDICTED: RNA-binding protein 28 isoform 2 [Papio anubis]
Length = 621
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 104/234 (44%), Positives = 138/234 (58%), Gaps = 7/234 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV-S 485
T+FI NL FD + EE+ + FGE+ VLH T+ KG F +F T EAA + +
Sbjct: 198 TVFIRNLSFDSEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLLA 257
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
AS G+ L GRQL V A+ + A + K K T RNLYLA+EGLI GT A
Sbjct: 258 ASPENEAGGLKLDGRQLKVDLAVTRDEAAKLQTKKVKKPTGT-RNLYLAREGLIRAGTKA 316
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS DM+KR+ K KL+ N VS+TRL ++NLPK++ +K L+KL + A
Sbjct: 317 AEGVSAADMAKRERFELLKHQKLKDQNIFVSQTRLCLHNLPKAVDDKQLRKLLLSAT--- 373
Query: 606 ASKQKPV-IKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
S +K V IK+ + ++ LK + K S G AF EF EH+HAL ALR++NNNP
Sbjct: 374 -SGEKGVRIKECRVMRDLKGVHGNMKGQSLGYAFAEFQEHEHALKALRLINNNP 426
>gi|297289254|ref|XP_002808412.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 28-like [Macaca
mulatta]
Length = 766
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/234 (44%), Positives = 138/234 (58%), Gaps = 7/234 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV-S 485
T+FI NL FD + EE+ + FGE+ VLH T+ KG F +F T EAA + +
Sbjct: 343 TVFIRNLSFDSEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLLA 402
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
AS G+ L GRQL V A+ + A + K K T RNLYLA+EGLI GT A
Sbjct: 403 ASPENEAGGLKLDGRQLKVDLAVTRDEAAKLQTKKVKKPTGT-RNLYLAREGLIRAGTKA 461
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS DM+KR+ K KL+ N VS+TRL ++NLPK++ +K L+KL + A
Sbjct: 462 AEGVSAADMAKRERFELLKHQKLKDQNIFVSQTRLCLHNLPKAVDDKQLRKLLLSAT--- 518
Query: 606 ASKQKPV-IKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
S +K V IK+ + ++ LK + K S G AF EF EH+HAL ALR++NNNP
Sbjct: 519 -SGEKGVRIKECRVMRDLKGVHGNMKGQSLGYAFAEFQEHEHALKALRLINNNP 571
Score = 42.7 bits (99), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV 43
+VT+KGS RGFGYV F+++ED RA +K T+ G KI V
Sbjct: 35 VVTEKGSKACRGFGYVTFSMLEDVQRA--LKEITTFEGCKINV 75
>gi|383419583|gb|AFH33005.1| RNA-binding protein 28 isoform 1 [Macaca mulatta]
Length = 763
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/234 (44%), Positives = 138/234 (58%), Gaps = 7/234 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV-S 485
T+FI NL FD + EE+ + FGE+ VLH T+ KG F +F T EAA + +
Sbjct: 340 TVFIRNLSFDSEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLLA 399
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
AS G+ L GRQL V A+ + A + K K T RNLYLA+EGLI GT A
Sbjct: 400 ASPENEAGGLKLDGRQLKVDLAVTRDEAAKLQTKKVKKPTGT-RNLYLAREGLIRAGTKA 458
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS DM+KR+ K KL+ N VS+TRL ++NLPK++ +K L+KL + A
Sbjct: 459 AEGVSAADMAKRERFELLKHQKLKDQNIFVSQTRLCLHNLPKAVDDKQLRKLLLSAT--- 515
Query: 606 ASKQKPV-IKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
S +K V IK+ + ++ LK + K S G AF EF EH+HAL ALR++NNNP
Sbjct: 516 -SGEKGVRIKECRVMRDLKGVHGNMKGQSLGYAFAEFQEHEHALKALRLINNNP 568
Score = 42.7 bits (99), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV 43
+VT+KGS RGFGYV F+++ED RA +K T+ G KI V
Sbjct: 35 VVTEKGSKACRGFGYVTFSMLEDVQRA--LKEITTFEGCKINV 75
>gi|355747987|gb|EHH52484.1| hypothetical protein EGM_12934 [Macaca fascicularis]
Length = 769
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/234 (44%), Positives = 138/234 (58%), Gaps = 7/234 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV-S 485
T+FI NL FD + EE+ + FGE+ VLH T+ KG F +F T EAA + +
Sbjct: 339 TVFIRNLSFDSEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLLA 398
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
AS G+ L GRQL V A+ + A + K K T RNLYLA+EGLI GT A
Sbjct: 399 ASPENEAGGLKLDGRQLKVDLAVTRDEAAKLQTKKVKKPTGT-RNLYLAREGLIRAGTKA 457
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS DM+KR+ K KL+ N VS+TRL ++NLPK++ +K L+KL + A
Sbjct: 458 AEGVSAADMAKRERFELLKHQKLKDQNIFVSQTRLCLHNLPKAVDDKQLRKLLLSAT--- 514
Query: 606 ASKQKPV-IKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
S +K V IK+ + ++ LK + K S G AF EF EH+HAL ALR++NNNP
Sbjct: 515 -SGEKGVRIKECRVMRDLKGVHGNMKGQSLGYAFAEFQEHEHALKALRLINNNP 567
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV 43
+VT+KGS RGFGYV F+++ED RA +K T+ G KI V
Sbjct: 35 VVTEKGSKACRGFGYVTFSMLEDVQRA--LKEITTFEGCKINV 75
>gi|402864714|ref|XP_003896596.1| PREDICTED: RNA-binding protein 28 isoform 1 [Papio anubis]
Length = 762
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/234 (44%), Positives = 138/234 (58%), Gaps = 7/234 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV-S 485
T+FI NL FD + EE+ + FGE+ VLH T+ KG F +F T EAA + +
Sbjct: 339 TVFIRNLSFDSEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLLA 398
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
AS G+ L GRQL V A+ + A + K K T RNLYLA+EGLI GT A
Sbjct: 399 ASPENEAGGLKLDGRQLKVDLAVTRDEAAKLQTKKVKKPTGT-RNLYLAREGLIRAGTKA 457
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS DM+KR+ K KL+ N VS+TRL ++NLPK++ +K L+KL + A
Sbjct: 458 AEGVSAADMAKRERFELLKHQKLKDQNIFVSQTRLCLHNLPKAVDDKQLRKLLLSAT--- 514
Query: 606 ASKQKPV-IKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
S +K V IK+ + ++ LK + K S G AF EF EH+HAL ALR++NNNP
Sbjct: 515 -SGEKGVRIKECRVMRDLKGVHGNMKGQSLGYAFAEFQEHEHALKALRLINNNP 567
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV 43
+VT+KGS RGFGYV F+++ED RA +K T+ G KI V
Sbjct: 35 VVTEKGSKACRGFGYVTFSMLEDVQRA--LKEITTFEGCKINV 75
>gi|156552149|ref|XP_001605703.1| PREDICTED: RNA-binding protein 28-like [Nasonia vitripennis]
Length = 794
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 130/450 (28%), Positives = 218/450 (48%), Gaps = 35/450 (7%)
Query: 213 KTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAE 272
+ ++ +++IRN+PF +K+ FS G + + I D G G F++F + A
Sbjct: 193 RQKRSRIVIRNLPFTVTDEIVKEHFSKYGNIEELKILKKPD-GTPTGVCFIQFDRVQCAA 251
Query: 273 SAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSD-SGSDDDLGDD--DA 329
AI N + R + VDWA+ K+ + K + + D S +++G+ D
Sbjct: 252 QAIHHENLKTLLNRAMVVDWAISKDKFVKQSKDQDTAVKVEDDDDISIVKEEIGEGVLDG 311
Query: 330 ETASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDS 389
+ + S++ED+ + DEE D S GS + D+ + + D
Sbjct: 312 DIKIKEEKDSDEEDVKEENESDEEGD----------SGEGSDVNNDDEDDDNEDEEADDK 361
Query: 390 DKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAF 449
+ D+ + ++S+ ++ + T+FI N+PF NE++KQ F
Sbjct: 362 N----------DIKREFDTESEAPHPRRISNDVSEGRTVFIKNVPFSATNEDLKQCMEQF 411
Query: 450 GEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALD 509
G V + + ++T+ KGT F+KF+ +E A +SA G + + + L +AL
Sbjct: 412 GPVYYALICMDRLTEHSKGTAFVKFRNIEDAEKCLSA-----GTELRIHDQVLDPHRALH 466
Query: 510 KKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQ 569
+ +K + K + D RNLYL KEG+IL G+PAA+ +S DM+KR L + K L+
Sbjct: 467 RNEVKEKSE-EKKKKVKDSRNLYLVKEGVILAGSPAAQDISASDMAKRLQLEQWKSQMLR 525
Query: 570 SPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVDT 629
+ N VSR RLVI+NLP S+ + L++L S VI + + ++ L+ +
Sbjct: 526 NLNMFVSRVRLVIHNLPPSVDDAKLRQL-----FKNHSNHNAVITEARVMRDLRNVDGNG 580
Query: 630 KHYSRGVAFVEFTEHQHALVALRVLNNNPS 659
S+ FV FT H+ AL ALR +NNNP+
Sbjct: 581 IGKSKEHGFVSFTNHEDALKALRSINNNPN 610
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 5/153 (3%)
Query: 198 KGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLS 257
+ G V R ++ +K ++++RN+ F ++ + ++ P G + V + D L
Sbjct: 24 RAGIVKKRVEDNSLAQAKKARIVVRNLSFNVTESDFRRLYEPFGELEEVKLLKRPDGKLV 83
Query: 258 KGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSD 317
G FV+F DA AI K N F R I+ +WA+PK+ +S +++
Sbjct: 84 -GCGFVQFKNLEDASKAIFKTNKSNFLGRTISSEWAIPKSQFSENLRKEQGESEVKDEVK 142
Query: 318 SGSDDDLGDDDAETA----SDDSNSSEKEDLPS 346
D+ DD+ TA SD S+ KE P+
Sbjct: 143 EEVGDNEADDEEHTAEAAESDKSHKKRKEAFPN 175
Score = 42.0 bits (97), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
Query: 12 GFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQ--RRSKVTQEVQAEDIE 69
G G+VQF +EDA++A+ N ++ GR I + A+ ++ + R+ + EV+ E E
Sbjct: 84 GCGFVQFKNLEDASKAIFKTNKSNFLGRTISSEWAIPKSQFSENLRKEQGESEVKDEVKE 143
Query: 70 KTMDNKDGVISGAEKHSSKLLESGKTVKPRKAA 102
+ DN+ + E+H+++ ES K+ K RK A
Sbjct: 144 EVGDNE----ADDEEHTAEAAESDKSHKKRKEA 172
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 101/232 (43%), Gaps = 30/232 (12%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
I + NL F++ + ++ + FGE+ V +L + + G GF++FK +E A+ A+ +
Sbjct: 45 IVVRNLSFNVTESDFRRLYEPFGELEE-VKLLKRPDGKLVGCGFVQFKNLEDASKAIFKT 103
Query: 488 KTTSGLGIFLKGRQLTVLKALDK-KLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
++ LG R ++ A+ K + + + ++ ++E D + E A
Sbjct: 104 NKSNFLG-----RTISSEWAIPKSQFSENLRKEQGESEVKDEVKEEVGDNEADDEEHTAE 158
Query: 547 EGVSDDDMSKRQ-------MLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCI 599
SD KR+ L + + KL R+R+VI NLP ++T
Sbjct: 159 AAESDKSHKKRKEAFPNKNALSKAEQRKLYKLRLRQKRSRIVIRNLPFTVT--------- 209
Query: 600 DAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVAL 651
D +V + I+++K L+ K T GV F++F Q A A+
Sbjct: 210 DEIVKEHFSKYGNIEELKILK--KPDGTPT-----GVCFIQFDRVQCAAQAI 254
>gi|380814228|gb|AFE78988.1| RNA-binding protein 28 isoform 1 [Macaca mulatta]
Length = 763
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/234 (44%), Positives = 138/234 (58%), Gaps = 7/234 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV-S 485
T+FI NL FD + EE+ + FGE+ VLH T+ KG F +F T EAA + +
Sbjct: 340 TVFIRNLSFDSEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLLA 399
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
AS G+ L GRQL V A+ + A + K K T RNLYLA+EGLI GT A
Sbjct: 400 ASPENEAGGLKLDGRQLKVDLAVTRDEAAKLQTKKVKKPTGT-RNLYLAREGLIRAGTKA 458
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS DM+KR+ K KL+ N VS+TRL ++NLPK++ +K L+KL + A
Sbjct: 459 AEGVSAADMAKRERFELLKHQKLKDQNIFVSQTRLCLHNLPKAVDDKQLRKLLLSAT--- 515
Query: 606 ASKQKPV-IKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
S +K V IK+ + ++ LK + K S G AF EF EH+HAL ALR++NNNP
Sbjct: 516 -SGEKGVRIKECRVMRDLKGVHGNMKGQSLGYAFAEFQEHEHALKALRLINNNP 568
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV 43
+VT+KGS RGFGYV F+++ED RA +K T+ G KI V
Sbjct: 35 VVTEKGSKACRGFGYVTFSMLEDVQRA--LKEITTFEGCKINV 75
>gi|355560966|gb|EHH17652.1| hypothetical protein EGK_14105 [Macaca mulatta]
Length = 762
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/234 (44%), Positives = 138/234 (58%), Gaps = 7/234 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV-S 485
T+FI NL FD + EE+ + FGE+ VLH T+ KG F +F T EAA + +
Sbjct: 339 TVFIRNLSFDSEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLLA 398
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
AS G+ L GRQL V A+ + A + K K T RNLYLA+EGLI GT A
Sbjct: 399 ASPENEAGGLKLDGRQLKVDLAVTRDEAAKLQTKKVKKPTGT-RNLYLAREGLIRAGTKA 457
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS DM+KR+ K KL+ N VS+TRL ++NLPK++ +K L+KL + A
Sbjct: 458 AEGVSAADMAKRERFELLKHQKLKDQNIFVSQTRLCLHNLPKAVDDKQLRKLLLSAT--- 514
Query: 606 ASKQKPV-IKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
S +K V IK+ + ++ LK + K S G AF EF EH+HAL ALR++NNNP
Sbjct: 515 -SGEKGVRIKECRVMRDLKGVHGNMKGQSLGYAFAEFQEHEHALKALRLINNNP 567
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV 43
+VT+KGS RGFGYV F+++ED RA +K T+ G KI V
Sbjct: 35 VVTEKGSKACRGFGYVTFSMLEDVQRA--LKEITTFEGCKINV 75
>gi|348506138|ref|XP_003440617.1| PREDICTED: RNA-binding protein 28-like [Oreochromis niloticus]
Length = 715
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/257 (40%), Positives = 146/257 (56%), Gaps = 5/257 (1%)
Query: 404 KLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVT 463
KL K S KQ + + T+FI NL FD + E++++ FGE+ VLH T
Sbjct: 275 KLGMDTQKKTSKKQLPSDVKEGRTVFIRNLSFDTEEEDLEEVLLQFGELNYIKIVLHPDT 334
Query: 464 KRPKGTGFLKFKTVEAATAAVSASKTTS-GLGIFLKGRQLTVLKALDKKLAHDKEIDKSK 522
+ KG F +FKT EAA ++A++ + GI + GR+L ++ A+ ++ A ++DK K
Sbjct: 335 EHSKGCAFAQFKTKEAADKCIAAAQDEAEDSGIRIHGRKLMIVAAVSREDAVKLKVDKKK 394
Query: 523 NETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVI 582
ET RNLYLA+EGLI GT AAEGV + DM KR E K KL+ N VS+TRL +
Sbjct: 395 VETGT-RNLYLAREGLIRPGTKAAEGVPETDMVKRTRFEEIKRAKLRDINVFVSKTRLCV 453
Query: 583 YNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFT 642
+NLPKS+ K LK LC+ AV + I + + + K K S G FV+F
Sbjct: 454 HNLPKSVDSKKLKSLCLQAVKGVKGVR---ITECRVIYDKKPEKGQVMGQSLGYGFVQFQ 510
Query: 643 EHQHALVALRVLNNNPS 659
+H+HAL LR LNNNP+
Sbjct: 511 DHEHALATLRYLNNNPN 527
>gi|20072578|gb|AAH27123.1| RNA binding motif protein 28 [Mus musculus]
Length = 500
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/233 (42%), Positives = 134/233 (57%), Gaps = 5/233 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T+FI NL FD + E + + FG++ VLH T+ KG F +F T EAA ++A
Sbjct: 76 TVFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAA 135
Query: 487 -SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
S G G+ L GRQL V A+ + A + K K T RNLYLA+EGLI GT A
Sbjct: 136 ASLEAEGGGLKLDGRQLKVDLAVTRDEAAKLQTKKVKKPTGT-RNLYLAREGLIRAGTKA 194
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS DM+KR+ K +L++ N VS+TRL ++NLPK++ +K L+KL ++A
Sbjct: 195 AEGVSAADMAKRERFELLKHQELKNQNIFVSQTRLCLHNLPKAVDDKQLRKLLLEATRGE 254
Query: 606 ASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
+ IK+ + ++ LK K S G AF EF +H+HAL ALR NNNP
Sbjct: 255 KGVR---IKECRVMRDLKGVHGKMKGQSLGYAFAEFQKHEHALRALRHFNNNP 304
>gi|345780010|ref|XP_003431930.1| PREDICTED: RNA-binding protein 28 isoform 1 [Canis lupus
familiaris]
Length = 610
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/233 (43%), Positives = 135/233 (57%), Gaps = 5/233 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV-S 485
T+FI NL FD + EE+ + FG++ VLH T+ KG F +F T EAA + +
Sbjct: 187 TVFIRNLSFDSEEEELGELLQQFGDLKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLEA 246
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
AS T G G+ L GRQL V A+ + A + K K T RNLYLA+EGLI GT A
Sbjct: 247 ASPETEGGGLKLDGRQLRVDLAVTRDEAAKLQTKKVKKPTGT-RNLYLAREGLIRAGTKA 305
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS DM+KR+ K KL+ N VS+TRL ++NLPK + +K L+KL ++A
Sbjct: 306 AEGVSAADMAKRERFELLKHQKLKDQNIFVSQTRLCLHNLPKGVDDKELRKLLLNATRGE 365
Query: 606 ASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
+ +K+ + ++ LK K S G AF EF EH+HAL ALR +NNNP
Sbjct: 366 KGVR---LKECRVMRDLKGVHGKVKGQSLGYAFAEFQEHEHALTALRHINNNP 415
>gi|348578891|ref|XP_003475215.1| PREDICTED: RNA-binding protein 28-like isoform 1 [Cavia porcellus]
Length = 758
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/233 (43%), Positives = 136/233 (58%), Gaps = 5/233 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T+FI NL FD + EE+ + FG++ VLH T+ KG F +F T EAA ++A
Sbjct: 335 TVFIRNLSFDSEEEELGELLQQFGDLKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLTA 394
Query: 487 -SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
S T G G+ L GRQL + A+ + A + K K T RNLYLA+EGLI GT A
Sbjct: 395 ASPETEGGGLKLDGRQLKIDLAVTRDEAAKLQTKKVKKPTGT-RNLYLAREGLIRAGTKA 453
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS DM+KR+ K KL+ N VS+TRL ++NLPK++ +K L+KL ++A
Sbjct: 454 AEGVSPADMAKRERFELLKHQKLKDQNIFVSQTRLCLHNLPKAVDDKQLRKLLLNATRGE 513
Query: 606 ASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
+ IK+ + ++ LK + K S G AF EF EH HAL ALR +NNNP
Sbjct: 514 KGVR---IKECRVMRDLKGVHGNMKGQSLGYAFAEFQEHAHALRALRHINNNP 563
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV---KHAMHRASLEQRRS 57
+VT+KGS RGFGYV F+++ED RA K T+ G KI + K + S E+R++
Sbjct: 35 VVTEKGSKACRGFGYVTFSMLEDVQRA--RKEITTFEGCKINITIAKKKLRNKSKEKRKN 92
>gi|302831822|ref|XP_002947476.1| hypothetical protein VOLCADRAFT_87629 [Volvox carteri f.
nagariensis]
gi|300267340|gb|EFJ51524.1| hypothetical protein VOLCADRAFT_87629 [Volvox carteri f.
nagariensis]
Length = 1345
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 113/331 (34%), Positives = 159/331 (48%), Gaps = 73/331 (22%)
Query: 382 KGNKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEE 441
+G + +D D E+ + SK ++S L T+F+ LP D E+
Sbjct: 666 QGEEAEDPDADDGEARPTTGPSKASAS--------------SLSTTVFVRGLPLDATKEQ 711
Query: 442 VKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAA---VSASKTTSGLGIFLK 498
++ R FG V + V+ + + +PKGT F++F+ EAA A S + G GI L
Sbjct: 712 LQARLELFGPVKACRLVMDKASGKPKGTAFVEFREEEAAGRAAAACSRGRRNEGPGITLS 771
Query: 499 GRQLTVLKALDKKLAHDKEIDK--SKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSK 556
GRQL V A+ + A D+ SK + D RNLYLAKEG I EG+PA G M++
Sbjct: 772 GRQLDVDLAVSGEDARKIATDRVASKAASKDRRNLYLAKEGHITEGSPAWNG-----MAR 826
Query: 557 RQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQI 616
R+ E+K TKL+SPNF +SRTRL + N+P + TE L+K+ +AV RA+K+ P + Q+
Sbjct: 827 RKRAAEEKNTKLRSPNFVISRTRLSVRNIPPNWTEGQLRKMFAEAVRQRATKENPRVVQV 886
Query: 617 K---------------------FLQSLKKG---------------KVDTK---------- 630
FL +KK +V K
Sbjct: 887 PFTGPIANTVGCLLEFGGEGLGFLLDIKKKANGVCSAPWKEECVFRVKAKILREQDRYDA 946
Query: 631 ---HYSRGVAFVEFTEHQHALVALRVLNNNP 658
S+G+ FVEF H HAL ALR LNNNP
Sbjct: 947 SGARKSKGLGFVEFESHDHALAALRQLNNNP 977
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 144/353 (40%), Gaps = 89/353 (25%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSK-- 58
+V KG +HRGFG+VQ+++ EDA RAV NG S+ GRK+ V+ A RA LE+R+ K
Sbjct: 38 LVRVKGQPKHRGFGFVQYSLPEDAERAVTEYNGKSLKGRKLQVELADKRAPLEERKKKRK 97
Query: 59 ------------------------------VTQEVQAEDIEKTMDNKDGVISGAE----K 84
+A EK KD + A+
Sbjct: 98 LGQDCGDDGGNVAPGAAAGGSAPHPALPGATYPAAEASTAEKKPRGKDPASAAADVGQPD 157
Query: 85 HSSKLLESGKTVKPRK---AATLGIDLADKEDCSQKQRVARTVIIGGLLNADMAEEVHRL 141
+ + + T PRK A A ++K + R V +G L + + + L
Sbjct: 158 GGAVPVTAAATQPPRKRQRADGAAAAAATAASAAEKHKFLRAVAVGNLTPQSIPQAIA-L 216
Query: 142 AGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVLYTTVKSACASVALLHQKEI---- 197
A + V SV P P + ++Q L +GC V+Y TVK A +V LH K +
Sbjct: 217 ARRVAPVESVMNPAPADIVQQAKLEGDGCSGSVVIVVYKTVKDAMHAVTQLHNKTLELRN 276
Query: 198 --------------------------------------------KGGTVWARQLGGEGSK 213
+ T+WAR + GEG+
Sbjct: 277 GAGGGGGGGGGKKGSQKGRKGQQQQVEEDGDGDGGDQQQQQQQQRLTTLWARGVKGEGAH 336
Query: 214 TQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFT 266
++W++I+RN+PFKA + + +P G VW + +P D G KGFAF FT
Sbjct: 337 VKQWRVIVRNLPFKATEAALLEALTPAGFVWELRLPRGPD-GRLKGFAFAAFT 388
Score = 45.4 bits (106), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ IR + F A +++ +FS VG V ++ +GF FV+++ DAE A+ ++
Sbjct: 9 VFIRGVSFDANEKDLEALFSDVGPVKQCFLVRVKGQPKHRGFGFVQYSLPEDAERAVTEY 68
Query: 279 NGQKFGKRPIAVDWA 293
NG+ R + V+ A
Sbjct: 69 NGKSLKGRKLQVELA 83
>gi|449018906|dbj|BAM82308.1| similar to ribosomal processing, RNA binding, nucleolar protein
Nop77 [Cyanidioschyzon merolae strain 10D]
Length = 766
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 126/503 (25%), Positives = 232/503 (46%), Gaps = 72/503 (14%)
Query: 212 SKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPH--------NTDTGLSKGFAFV 263
S ++ ++I+RN+PF+ ++ + + VG + V +P ++DT + G+AF
Sbjct: 232 STRKQCRVILRNLPFRFSLDALLERLRQVGPLVAVNVPRKAASTGGASSDTCWA-GYAFA 290
Query: 264 KFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDD 323
++ + DA +A+Q+ NGQ F R +A+D A+ ++ Y A+ N D + DS ++ +
Sbjct: 291 EYFTRADANAAVQRLNGQSFCGRVLALDRALSRDDYRERQASTA-DNASDASRDSNANTE 349
Query: 324 LGDDDAETASDDS----NSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSA 379
GD A ++ + ++S + D P++A L + T + ++D +
Sbjct: 350 -GDGRASSSEACTTKVVHASHEADTPASA---------------LPAETAAQTPVADGAH 393
Query: 380 LVKGNKEQDSDKTVNESAKVSDVSKLNSSKS--------KPKSLKQTEGED--------- 422
+ + + + +L +S S + K L + G D
Sbjct: 394 APSDRSRKRQRPAATTTTTTTRIERLEASSSDSMQPEADQAKPLHTSSGRDGEASRVGAG 453
Query: 423 --------ELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKF 474
L T+F+ ++P D +VK +G + V +T P+G F+ F
Sbjct: 454 TSEDRARAMLACTLFVRHVPLDATAAQVKALLEPYGPIRYCALVRDSITGLPRGRAFVCF 513
Query: 475 KTVEAATAAVSASKTTSGLGIF-----LKGRQLTVLKALDKK-----LAHDKEIDKSKNE 524
+A ++ + + + + L G++L AL + + ++ ++
Sbjct: 514 AERASAERVLNEASSDAPASLHESAFQLHGQRLQFSWALSRTDVAQVVTQRQQSMLTRAH 573
Query: 525 TNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL-QSPNFHVSRTRLVIY 583
+D RNLYLA EG+I PAA G+S+ +++ R+ L + K KL ++P+ VSRT L ++
Sbjct: 574 HSDRRNLYLALEGVIERHQPAAAGLSESELALRERLEQAKQRKLRRNPHTFVSRTLLSVH 633
Query: 584 NLPKSMTEKGLKKLCIDAVVSRASKQKP-VIKQIKFLQSLKKGKVDTKHYSRGVAFVEFT 642
N+P+S+ +K + A S + KP VIKQ++ + + K AFVEF
Sbjct: 634 NIPRSLRIAQIKAIFAQAGASTETDAKPAVIKQVRIARERSR-----KQRVCAYAFVEFA 688
Query: 643 EHQHALVALRVLNNNPSKLFYHH 665
H AL ALR++NNNP+ L H
Sbjct: 689 THDAALRALRLVNNNPNVLPAPH 711
>gi|405965605|gb|EKC30968.1| RNA-binding protein 28 [Crassostrea gigas]
Length = 818
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 138/231 (59%), Gaps = 6/231 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T+FI N+PFD+D E ++ FS +G++ V++ T +PKGT F++FKT + A SA
Sbjct: 447 TLFIRNVPFDIDEESLEDEFSEYGKINYVKIVVNPKTGQPKGTAFVQFKTQKEAEKFRSA 506
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
++ GI + GR+L V++ALD++ A K K + D RNL+L +EG+I GT +A
Sbjct: 507 AEDNDE-GIVIDGRRLVVMEALDRQKAQALSGQKEKVK-EDKRNLHLVREGMIRPGTQSA 564
Query: 547 EGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRA 606
G+S +D+ KR L K KL++PN VS TRL ++N+P +T+ LK + + A S+A
Sbjct: 565 IGLSKEDLLKRTKLENAKRAKLKNPNIFVSTTRLSVHNIPTQVTDNQLKTMFLKAADSKA 624
Query: 607 SKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNN 657
+ VI + + ++ SRG AFV F+ HQHAL AL+ N+N
Sbjct: 625 A----VITECRIMRDSDGNNKKKLGKSRGFAFVNFSCHQHALNALKNTNSN 671
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +RN+PF + + +FS VG V ++ + D+ SKGF +V ++ DAE+A+ K
Sbjct: 17 LFVRNLPFSVGNEKFEALFSEVGPVRTCFVVKDKDSQKSKGFGYVTYSMFEDAEAAVSKI 76
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T+F+ NLPF + NE+ + FS G V + V + +++ KG G++ + E A AAVS
Sbjct: 16 TLFVRNLPFSVGNEKFEALFSEVGPVRTCFVVKDKDSQKSKGFGYVTYSMFEDAEAAVSK 75
Query: 487 SKTTSGLGIFLK 498
+ G +F++
Sbjct: 76 IMSLDGRRLFVQ 87
>gi|410952791|ref|XP_003983061.1| PREDICTED: RNA-binding protein 28-like, partial [Felis catus]
Length = 443
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/233 (42%), Positives = 135/233 (57%), Gaps = 5/233 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV-S 485
T+FI NL FD + EE+ + FG++ VLH T+ KG F +F T EAA + +
Sbjct: 20 TVFIRNLSFDSEEEELGELLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLEA 79
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
AS T G G+ L GR L + A+ + A + K K T RNLYLA+EGLI GT A
Sbjct: 80 ASPETEGGGLKLDGRLLRIDLAVTRDEAAKLQTKKVKKPTGT-RNLYLAREGLIRAGTKA 138
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS DM+KR+ K KL+ N VS+TRL ++NLPK++ +K L+KL ++A
Sbjct: 139 AEGVSAADMAKRERFELLKHQKLKDQNIFVSQTRLCLHNLPKAVDDKELRKLLLNATRGE 198
Query: 606 ASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
+ +K+ + ++ LK K S G AF EF EH+HAL ALR +NNNP
Sbjct: 199 KGVR---LKECRVMRDLKGAHGKVKGQSLGYAFAEFQEHEHALTALRHINNNP 248
>gi|388581139|gb|EIM21449.1| hypothetical protein WALSEDRAFT_38416, partial [Wallemia sebi CBS
633.66]
Length = 866
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 191/768 (24%), Positives = 315/768 (41%), Gaps = 215/768 (27%)
Query: 7 SNEHRGFGYVQFAVMEDANRAVEMKNGTSVGG-----RKIGVKHAMHRASLEQRRSKVTQ 61
+ E +G GYV +A+ EDA A NG + G RK V+ A RA+L++R+
Sbjct: 44 TKESKGVGYVTYAMREDAVAASTEMNGKLITGEGNDKRKCRVEWARQRATLKERK----- 98
Query: 62 EVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQRVA 121
E+ DN+ + G K +K T + A D
Sbjct: 99 -------EQAKDNELSNVLGE--------------KTQKQRTRKVSTAKDPDA------I 131
Query: 122 RTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVLYTT 181
RTV++ GL +E+++ IG V SV +L+ +A V + T
Sbjct: 132 RTVVLSGLPTGVTQKEIYKKVRKIGNVESV-------DLKDDDIAH---------VKFET 175
Query: 182 VKSACASVALLHQKEIKGGTVWARQL-------GGEGSKTQKWKLIIRNIPFKAKVNEIK 234
A ++ LH KG T+ A L G+G +++ +LI+RN+ F +++K
Sbjct: 176 PSIANKALPKLHAHIFKGKTISAVLLKRLETAVSGKGKVSRRSRLIVRNLNFNITRDDLK 235
Query: 235 DMFSPVGLVWNVYIP--HNTDTGL-SKGFAFVKFTCKRDAESAIQKFNGQ---------- 281
F P G + ++ +P D L +KG+ FV +T DA+ AI NG+
Sbjct: 236 ATFIPFGDIHSITLPTIEAKDGSLHNKGYGFVWYTFYHDAQKAIDGMNGKSVKIATSEAD 295
Query: 282 ------------KFGK----RPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLG 325
K K RP+AVDWA+ K+ + + + K + + + D
Sbjct: 296 VAAAGGTKKQRKKIAKDIESRPVAVDWALSKDQWEN-------EQKAEEKDEKAGEKD-- 346
Query: 326 DDDAETASDDSNSSEKEDL----------PSNADFDEEVDIARKVLNKLTSTTGSLPSLS 375
D+ E ASD S+ S ED P N++ D++ +++ +L
Sbjct: 347 DEKMEDASDKSDESGSEDEEEEEENEDQSPENSEIDDD-----EIMEELE---------- 391
Query: 376 DDSALVKGNKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPF 435
NES + + ++K L ED L T+F+ N+PF
Sbjct: 392 ------------------NESGTEESGDEDDEEEAKAPPL-----EDGL--TLFVRNIPF 426
Query: 436 DLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKF----------KTVEAATAAVS 485
+ E++ F FG++ + T+R +G GF+ F KT E A
Sbjct: 427 EATQEDLYDVFRKFGKLRYARVTMDYETERSRGNGFVAFWNMKDAQECLKTAEIVRATTG 486
Query: 486 ASK--------------------TTSGLGIFLKGRQLTVLKALDKKLAHDK--EIDKSKN 523
++ + S + L+GR L V+KA+ + A +K E DK K+
Sbjct: 487 TNQQDSMKQNPFQTSSILTADPTSKSAQRLTLQGRVLDVIKAVSRDEAVEKKEEGDKIKH 546
Query: 524 ETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQS-PNFHVSRTRLVI 582
+ D RN+YL +EG+I +PA +S+ D +R + L+S P+ ++S+TRL I
Sbjct: 547 K-KDKRNVYLIREGVIFPNSPAGSTLSEADQERRMKSFNARRKLLESNPSLYISKTRLSI 605
Query: 583 YNLPKSMTEKGLKKLCIDAV------VSRASKQKPVIKQIKFLQSLKKGKVDTKHY---- 632
+P +T++ LK+L + AV VSR ++ ++++ + + K K Y
Sbjct: 606 RQIPLFVTDRVLKRLALHAVKEFEVEVSRGEREALSREELEDMTESEGVKDPKKGYKGRP 665
Query: 633 -----------------------SRGVAFVEFTEHQHALVALRVLNNN 657
SRG F+E + H++AL LR NNN
Sbjct: 666 TAVVQSKIVRQTDRVDSVTGLGRSRGYGFLEMSNHKNALRVLRYANNN 713
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 31/58 (53%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAA 483
+T+FI NLPF L NE + FS G V S V TK KG G++ + E A AA
Sbjct: 7 STLFISNLPFSLTNESLLTAFSDVGPVKSAFVVADHETKESKGVGYVTYAMREDAVAA 64
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 207 LGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFT 266
+ EGS T L I N+PF + FS VG V + ++ + +T SKG +V +
Sbjct: 1 MSKEGSST----LFISNLPFSLTNESLLTAFSDVGPVKSAFVVADHETKESKGVGYVTYA 56
Query: 267 CKRDAESAIQKFNGQKF-----GKRPIAVDWA 293
+ DA +A + NG+ KR V+WA
Sbjct: 57 MREDAVAASTEMNGKLITGEGNDKRKCRVEWA 88
>gi|157822711|ref|NP_001101320.1| RNA-binding protein 28 [Rattus norvegicus]
gi|149065129|gb|EDM15205.1| RNA binding motif protein 28 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 700
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 141/455 (30%), Positives = 209/455 (45%), Gaps = 78/455 (17%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+LIIRN+ FK +++K +F+ G V V IP D G +GFAF++F +A A++
Sbjct: 115 RLIIRNLSFKCSEDDLKSVFTHYGTVLEVNIPRKPD-GKMRGFAFIQFKNLLEAGKALKG 173
Query: 278 FNGQKFGKRPIAVDWAVPKNIYS-------SGGAAAGVQNKGDGNSDSGSDDDLGDDDAE 330
N ++ R +AVDWAV K+ Y SGG + + + + S ++ +DD +
Sbjct: 174 ANMKEIKGRTVAVDWAVAKDKYKDAQHTSVSGGKKSSERKPKESSKKSCRVEEQVEDDDD 233
Query: 331 TASDDSNSSEKEDLPSNAD--FDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQD 388
D+ + ++D + D V + ++ + + + DDS L +G+
Sbjct: 234 DGEDEEDDDTQDDEDESRDSTVASPVSVRKRAVKRAAPEESTEEDTYDDSDLEEGSSSY- 292
Query: 389 SDKTVNESAKVSDVSKLNSSKSKPKSLKQ----TEGEDELQNTIFICNLPFDLDNEEVKQ 444
D T + + ++ + SK K K TEG+ T+FI NL FD + E + +
Sbjct: 293 GDGTAHSESSTEELEDEDVPVSKKKKRKLPSDVTEGK-----TVFIRNLSFDSEEEALGE 347
Query: 445 RFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA-SKTTSGLGIFLKGRQLT 503
FG++ VLH T+ KG F +F T EAA ++A S T G G+ L GRQL
Sbjct: 348 VLQQFGDLKYVRIVLHPDTEHSKGCAFAQFVTQEAAQKCLAAASPETEGGGLKLDGRQLK 407
Query: 504 VLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEK 563
V A+ + A + K K T RNLYLA+EGLI GT AAEGVS DM+KR+
Sbjct: 408 VDLAVTRDEAAKLQTKKVKKPTGT-RNLYLAREGLIRAGTKAAEGVSAADMAKRE----- 461
Query: 564 KMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLK 623
R R V++ +K +
Sbjct: 462 -------------RCR--------------------------------VMRDLKAVHGKM 476
Query: 624 KGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
KG+ S G AFVEF +H+HAL ALR NNNP
Sbjct: 477 KGQ------SLGYAFVEFQKHEHALRALRHFNNNP 505
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV 43
+VT+KGS RGFGYV F+++ED RA +K T+ G KI V
Sbjct: 35 VVTEKGSKACRGFGYVTFSMLEDVQRA--LKEITTFEGCKINV 75
>gi|194018610|ref|NP_001123392.1| RNA binding motif protein 28 [Xenopus (Silurana) tropicalis]
gi|189442619|gb|AAI67360.1| rbm28 protein [Xenopus (Silurana) tropicalis]
Length = 828
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 95/233 (40%), Positives = 142/233 (60%), Gaps = 5/233 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T+FI NL F+ + E++++ FG + VLH VT+ KG F+++ +AA ++A
Sbjct: 350 TLFIRNLSFNSEEEDLEEILLRFGNIKYVRIVLHPVTEHSKGCAFVQYVEKQAAERCLAA 409
Query: 487 SKTTS-GLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
+ S G+ L GR+L V A+ ++ A +K K + RNLYLA+EGLI EGT A
Sbjct: 410 ANDQSENGGLKLDGRKLLVNLAVSREEAGKLRENKVKKPSG-IRNLYLAREGLIREGTKA 468
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEG+S +D++KR E K KL+ N VS+TRL ++N+PKS+ +K L++L + A
Sbjct: 469 AEGLSPEDLAKRARFEEIKRQKLKCQNIFVSKTRLCVHNIPKSVDDKKLRQLFLTASGGG 528
Query: 606 ASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
+S + IK+ + ++ LK + K S G AFVEF EH+HAL ALR +NNNP
Sbjct: 529 SSVR---IKECRVMRDLKGIGGNHKGQSLGYAFVEFLEHEHALAALRSVNNNP 578
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHA 46
+V +KG+ + RGFGYV F++MEDA RA MK GRKI V+ A
Sbjct: 35 VVREKGTEKCRGFGYVTFSMMEDAQRA--MKEIKEYEGRKIEVQVA 78
>gi|396465644|ref|XP_003837430.1| similar to ribosome biogenesis (Nop4) [Leptosphaeria maculans JN3]
gi|312213988|emb|CBX93990.1| similar to ribosome biogenesis (Nop4) [Leptosphaeria maculans JN3]
Length = 759
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 159/581 (27%), Positives = 244/581 (41%), Gaps = 156/581 (26%)
Query: 177 VLYTTVKSACASVALLHQKEIKGGTV-----WARQLGGEGSK-----------------T 214
V + V+ A + L+ E+KG + ARQ GE +
Sbjct: 95 VTFADVEDAQRAKEELNNSELKGKKIKVDVAEARQREGEEKRPKAGDRAKAERAQQIKDA 154
Query: 215 QKWKLIIRNIPFKAKVNE-IKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAES 273
Q KLIIRN+P+ K E ++ +F G V V +P + G +GF FV +++AE+
Sbjct: 155 QTPKLIIRNLPWTVKTPEDLQKLFRSFGKVNFVNLPKKPN-GELRGFGFVSLRGRKNAEN 213
Query: 274 AIQKFNGQKFGKRPIAVDWAVPKNIYSS------------GGAAAGVQNKGDGNSDSGSD 321
AI++ NG++ RPIAVDWAV ++ + + G + D S + SD
Sbjct: 214 AIRELNGKEIDDRPIAVDWAVDRDTWQTLQKSEQEGEETQSGTEKEDKEMEDAESSNTSD 273
Query: 322 DDLGDDDAETASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALV 381
GDD+ ++ ++ +S +++ SN D++ DI+
Sbjct: 274 ---GDDNDDSEAEADDSEDEDMDDSNTDYE---DIS------------------------ 303
Query: 382 KGNKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEE 441
E D D + L+ KPK + TIFI NLPF +D+E
Sbjct: 304 ----EDDEDGGFD----------LDEENDKPKRE---------EYTIFIRNLPFTVDDER 340
Query: 442 VKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVE----------------------- 478
+K+ F FG V V+ + T+RPKGTGF+ F T E
Sbjct: 341 LKEHFQQFGGVRFARVVIDRETERPKGTGFVSFFTEEDMINCLKGVPRVKLQKKNLDKKD 400
Query: 479 ----AATAAVSASKTTSGLGIF-LKGRQLTVLKALDKKLAHDKEIDKSK---NETNDHRN 530
T +V G + + GR L + +A+DK A + + N D R
Sbjct: 401 GSTITVTHSVLEDAEADPTGRYTIDGRILQLSRAVDKNEATRLTTEGAAQRFNRDKDKRR 460
Query: 531 LYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQ-SPNFHVSRTRLVIYNLPKSM 589
LYL EG I +P + +S ++ R+ + ++Q +P+ H+S TRL + N+P+S+
Sbjct: 461 LYLLSEGTISSKSPLYQHLSPSEIKMREESATLRRKQIQENPSLHLSLTRLSVRNIPRSI 520
Query: 590 TEKGLKKLCIDAVVS-------------------------------RASKQKPVIKQIKF 618
T K LK+L AVV R K K ++KQ K
Sbjct: 521 TSKDLKQLARSAVVGFAADVKAGKRNKLNREETIRGGQEMLVAEKMRKKKGKGIVKQAKV 580
Query: 619 LQSLKKG-KV--DT-KHYSRGVAFVEFTEHQHALVALRVLN 655
+ G KV DT SRG F+E+ H++AL+ALR LN
Sbjct: 581 VFETPAGSKVAEDTGAGRSRGYGFIEYYTHRNALMALRWLN 621
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASL-EQRRSKV 59
+V K + E +G+G+V FA +EDA RA E N + + G+KI V A R E++R K
Sbjct: 80 VVLDKETRESKGYGFVTFADVEDAQRAKEELNNSELKGKKIKVDVAEARQREGEEKRPKA 139
Query: 60 TQEVQAEDIEKTMD 73
+AE ++ D
Sbjct: 140 GDRAKAERAQQIKD 153
>gi|334348504|ref|XP_003342065.1| PREDICTED: RNA-binding protein 28 isoform 2 [Monodelphis domestica]
Length = 616
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/234 (42%), Positives = 139/234 (59%), Gaps = 7/234 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T+FI NL FD + E++ + FG++ VLHQ T+ KG F +F T EAA A ++A
Sbjct: 193 TVFIRNLSFDSEEEDLGEILQQFGDLKYVRIVLHQDTEHSKGCAFAQFMTQEAAQACLAA 252
Query: 487 SKT-TSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
+ T G+ L GR+L V A+ + A K +T RNLYLA+EGLI GT A
Sbjct: 253 ASAETEDGGLKLDGRKLKVDLAVTRDEAEKLRSKNVKKQTGT-RNLYLAREGLIRAGTKA 311
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAV-VS 604
AEG+S D++KR+ K KL+ N VS+TRL ++NLPK++ +K L+KL + A
Sbjct: 312 AEGLSAADIAKRERFELLKHQKLKDQNIFVSKTRLCLHNLPKAVDDKQLRKLLLTATGGG 371
Query: 605 RASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
RA + +K+ + ++ LK + K S G AFVEF EH+HAL ALR +NNNP
Sbjct: 372 RAVR----LKECRVMRDLKGAHGNVKGQSLGYAFVEFEEHEHALAALRHINNNP 421
>gi|126340777|ref|XP_001371879.1| PREDICTED: RNA-binding protein 28 isoform 1 [Monodelphis domestica]
Length = 761
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/234 (42%), Positives = 139/234 (59%), Gaps = 7/234 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T+FI NL FD + E++ + FG++ VLHQ T+ KG F +F T EAA A ++A
Sbjct: 338 TVFIRNLSFDSEEEDLGEILQQFGDLKYVRIVLHQDTEHSKGCAFAQFMTQEAAQACLAA 397
Query: 487 SKT-TSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
+ T G+ L GR+L V A+ + A K +T RNLYLA+EGLI GT A
Sbjct: 398 ASAETEDGGLKLDGRKLKVDLAVTRDEAEKLRSKNVKKQTGT-RNLYLAREGLIRAGTKA 456
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAV-VS 604
AEG+S D++KR+ K KL+ N VS+TRL ++NLPK++ +K L+KL + A
Sbjct: 457 AEGLSAADIAKRERFELLKHQKLKDQNIFVSKTRLCLHNLPKAVDDKQLRKLLLTATGGG 516
Query: 605 RASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
RA + +K+ + ++ LK + K S G AFVEF EH+HAL ALR +NNNP
Sbjct: 517 RAVR----LKECRVMRDLKGAHGNVKGQSLGYAFVEFEEHEHALAALRHINNNP 566
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 30/43 (69%), Gaps = 2/43 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV 43
+VT+KGS RGFGYV F+++EDA RA+ K T+ G KI V
Sbjct: 35 VVTEKGSKTCRGFGYVTFSMLEDAQRAI--KEVTTFEGCKINV 75
>gi|429856401|gb|ELA31310.1| RNA recognition motif containing protein [Colletotrichum
gloeosporioides Nara gc5]
Length = 836
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 148/494 (29%), Positives = 232/494 (46%), Gaps = 75/494 (15%)
Query: 218 KLIIRNIPFKAKVNE-IKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
KLIIRN+P+ K +E + +F G+V +P N G KGF FV +++AE+A++
Sbjct: 230 KLIIRNLPWTIKNSEQLSALFRAYGIVKYADLPQNK--GKLKGFGFVTLRGRKNAETALK 287
Query: 277 KFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDDS 336
NG+ RPIAVDWAV K+ + QNK D N++ GD+ +T +
Sbjct: 288 SLNGKVIDGRPIAVDWAVDKSEWEK-------QNKDDKNAE-------GDEKPKTKKKND 333
Query: 337 NSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTVNES 396
EK+ S+ + DE+ + A L T G+ +L D+ ++D D+ +
Sbjct: 334 AKEEKKKASSSKN-DEDPNDADADLENFMKTFGA--NLEDEPESDDNKDDEDKDEEDEDE 390
Query: 397 AKVSDVSKLNSSKSKPK-SLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF 455
++SD ++ + + K S + + Q+TIFI NLPF + +E++K F FG V
Sbjct: 391 DELSDEEDFSNEEEEEKDSAPKKQASTGNQSTIFIRNLPFTVTDEQLKTHFVQFGPVRYA 450
Query: 456 VPVLHQVTKRPKGTGFLKFKTVEAATAAV-SASKT-TSGL---------------GIF-L 497
V + T RP GTGF+ F E A A + A +T TS L G + L
Sbjct: 451 RVVKDRETDRPAGTGFVCFVKEEDARACIKGAPRTQTSALPTKHSVLQDETADQDGRYTL 510
Query: 498 KGRQLTVLKALDKKLAHDKEIDKS-KNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSK 556
+ R L V +A+ K A D S K D R L+L EG I + + ++ ++
Sbjct: 511 ESRLLQVAQAVSKDDAERLAADGSAKRREKDKRRLFLLNEGQIDTRSALYQRLTPSEIKM 570
Query: 557 RQMLHEKKMTKLQS-PNFHVSRTRLVIYNLPKSMTEKGLKKL----CI------------ 599
R+ ++ +QS P H+S TRL + N+P+ + K LK+L C+
Sbjct: 571 REQSANQRKKLVQSNPTLHISLTRLAVRNIPRDIGSKELKELARKACVEFATDVKEGKRQ 630
Query: 600 ---------------DAVVSRASKQKPVIKQIKFLQSLKKGKVDTKH---YSRGVAFVEF 641
DA R K+K +++Q K ++G T+ SRG F+E+
Sbjct: 631 PLSKEEKVRSAKEAKDAEHERKLKRKGIVRQAKIEYESREGSKVTEAAGGRSRGYGFIEY 690
Query: 642 TEHQHALVALRVLN 655
+ H+ AL+ LRVLN
Sbjct: 691 SSHRWALMGLRVLN 704
>gi|260788540|ref|XP_002589307.1| hypothetical protein BRAFLDRAFT_97371 [Branchiostoma floridae]
gi|229274484|gb|EEN45318.1| hypothetical protein BRAFLDRAFT_97371 [Branchiostoma floridae]
Length = 466
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/256 (38%), Positives = 144/256 (56%), Gaps = 11/256 (4%)
Query: 408 SKSK-PKSLKQTEGEDELQ-NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKR 465
SKSK PK + E D Q T+FI NL +D E+V++ F FG + V+ T+
Sbjct: 8 SKSKTPKPFR--ESTDVQQGKTVFIRNLSYDSLEEDVEELFLQFGGIKYVRLVVDPQTEH 65
Query: 466 PKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNET 525
+GTGF++F + EAA V + T G+ L GR+LTV A+ ++ A DK + +
Sbjct: 66 SRGTGFVQFNSKEAADKCVQQANTE---GLSLAGRRLTVSIAVSRQQAQKLTEDKKEKKP 122
Query: 526 NDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNL 585
D RNLYLA+EGLI GT AA G++D D++ RQ + + K KL++P VS RL + N+
Sbjct: 123 TDKRNLYLAREGLIRPGTQAAAGLTDKDLAMRQKVEKIKREKLKNPAIFVSDVRLCVRNV 182
Query: 586 PKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQ 645
P +M +K L+KL + + + I + + ++ LK SRG FV F++H
Sbjct: 183 PLNMGDKELRKLFLKTLGDKNVH----ITESRIMRDLKNVNSQGVGKSRGYGFVSFSQHD 238
Query: 646 HALVALRVLNNNPSKL 661
HAL ALR NNNP+ L
Sbjct: 239 HALRALRETNNNPNVL 254
>gi|389632413|ref|XP_003713859.1| nucleolar protein 4 [Magnaporthe oryzae 70-15]
gi|351646192|gb|EHA54052.1| nucleolar protein 4 [Magnaporthe oryzae 70-15]
Length = 722
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 146/502 (29%), Positives = 224/502 (44%), Gaps = 80/502 (15%)
Query: 218 KLIIRNIPFKAKV-NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
KLIIRN+P+ K +++ +F G V +P N+ LS GF FV K++AE AI+
Sbjct: 122 KLIIRNLPWSIKTKDQLSALFQSYGKVRFSDVP-NSKGKLS-GFGFVTLRGKKNAEKAIE 179
Query: 277 KFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDDS 336
NG++ R IAVDWAV K + Q + + +SD+ + DAE S
Sbjct: 180 GLNGKEVDGRTIAVDWAVDKATWEK-------QQQNEDDSDTPKKTKMKKVDAEAKSKAD 232
Query: 337 NSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTVNES 396
+S K N DFDE+ D+ N+ + S DD K + D+ +E
Sbjct: 233 QASTKTKPKGNDDFDEDEDLKNFFANQGDNLEDEDESDEDDDEDKKSEDADEEDEDEDEE 292
Query: 397 AKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFV 456
++V+ +K P++ + NT+FI NLPF +E++K+ F+ FG V
Sbjct: 293 EGGANVNDDEETKKTPQTTDNS-------NTLFIRNLPFTTTDEQLKEHFTHFGAVRYAR 345
Query: 457 PVLHQVTKRPKGTGFLKFKTVEAATAAVSAS-----------------KTTSGLGIF-LK 498
V+ T++ G GF+ F E A + + A+ +T G + L+
Sbjct: 346 VVMDHATQKSAGKGFVCFFNAEDAESCLRAAPKYRPAPTLSKHSVLQDETVDTDGKYTLE 405
Query: 499 GRQLTVLKALDKKLAHDKEIDKSK---NETNDHRNLYLAKEGLILEGTPAAEGVSDDDMS 555
GR L V KAL K A + + +E D R L+L EG I +P + ++
Sbjct: 406 GRILQVSKALSKGEAQQLSSEAAAARDSEEKDKRRLFLLNEGQIRPDSPIYSQLPQSEIQ 465
Query: 556 KRQMLHEKKMTKLQS-PNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS-----RASKQ 609
R+ +++ ++S P+ H+S TRL I N+P+SMT K LK L AVV +A K+
Sbjct: 466 MREASAKQRKKMIESNPSLHLSLTRLAIRNIPRSMTSKDLKALARQAVVGFATDVKAGKR 525
Query: 610 KP--------------------------VIKQIKFLQSLKKG-KVDTKH---------YS 633
+P V+ Q K + K G KV S
Sbjct: 526 QPLSKEESRRAAKTGKEAEHKRKLKRSGVVSQAKVVFESKDGSKVSEPRKGAAADAGAKS 585
Query: 634 RGVAFVEFTEHQHALVALRVLN 655
RG F+E++ H+ AL+ R LN
Sbjct: 586 RGYGFIEYSSHRWALMGARWLN 607
>gi|440473347|gb|ELQ42150.1| nucleolar protein 4 [Magnaporthe oryzae Y34]
gi|440489430|gb|ELQ69086.1| nucleolar protein 4 [Magnaporthe oryzae P131]
Length = 759
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 146/502 (29%), Positives = 224/502 (44%), Gaps = 80/502 (15%)
Query: 218 KLIIRNIPFKAKV-NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
KLIIRN+P+ K +++ +F G V +P N+ LS GF FV K++AE AI+
Sbjct: 159 KLIIRNLPWSIKTKDQLSALFQSYGKVRFSDLP-NSKGKLS-GFGFVTLRGKKNAEKAIE 216
Query: 277 KFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDDS 336
NG++ R IAVDWAV K + Q + + +SD+ + DAE S
Sbjct: 217 GLNGKEVDGRTIAVDWAVDKATWEK-------QQQNEDDSDTPKKTKMKKVDAEAKSKAD 269
Query: 337 NSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTVNES 396
+S K N DFDE+ D+ N+ + S DD K + D+ +E
Sbjct: 270 QASTKTKPKGNDDFDEDEDLKNFFANQGDNLEDEDESDEDDDEDKKSEDADEEDEDEDEE 329
Query: 397 AKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFV 456
++V+ +K P++ + NT+FI NLPF +E++K+ F+ FG V
Sbjct: 330 EGGANVNDDEETKKTPQTTDNS-------NTLFIRNLPFTTTDEQLKEHFTHFGAVRYAR 382
Query: 457 PVLHQVTKRPKGTGFLKFKTVEAATAAVSAS-----------------KTTSGLGIF-LK 498
V+ T++ G GF+ F E A + + A+ +T G + L+
Sbjct: 383 VVMDHATQKSAGKGFVCFFNAEDAESCLRAAPKYRPAPTLSKHSVLQDETVDTDGKYTLE 442
Query: 499 GRQLTVLKALDKKLAHDKEIDKSK---NETNDHRNLYLAKEGLILEGTPAAEGVSDDDMS 555
GR L V KAL K A + + +E D R L+L EG I +P + ++
Sbjct: 443 GRILQVSKALSKGEAQQLSSEAAAARDSEEKDKRRLFLLNEGQIRPDSPIYSQLPQSEIQ 502
Query: 556 KRQMLHEKKMTKLQS-PNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS-----RASKQ 609
R+ +++ ++S P+ H+S TRL I N+P+SMT K LK L AVV +A K+
Sbjct: 503 MREASAKQRKKMIESNPSLHLSLTRLAIRNIPRSMTSKDLKALARQAVVGFATDVKAGKR 562
Query: 610 KP--------------------------VIKQIKFLQSLKKG-KVDTKH---------YS 633
+P V+ Q K + K G KV S
Sbjct: 563 QPLSKEESRRAAKTGKEAEHKRKLKRSGVVSQAKVVFESKDGSKVSEPRKGAAADAGAKS 622
Query: 634 RGVAFVEFTEHQHALVALRVLN 655
RG F+E++ H+ AL+ R LN
Sbjct: 623 RGYGFIEYSSHRWALMGARWLN 644
>gi|94733636|emb|CAK04114.1| novel protein (zgc:56258) [Danio rerio]
Length = 865
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/233 (40%), Positives = 133/233 (57%), Gaps = 6/233 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
TIFI NL FD + E +++ FGE+ V++ T KG F +FK+ EAA ++A
Sbjct: 440 TIFIRNLSFDSEEEGLEEVLLQFGELSYVRVVMNPDTGVSKGCAFAQFKSKEAAEKCIAA 499
Query: 487 SKTTSGL-GIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
+ GI L GR+L +L A+++ A + K K T RNLYLA+EGLI GT A
Sbjct: 500 ALDEKEFSGIKLDGRRLNILMAINRDDAAKFKDKKVKTHTGS-RNLYLAREGLIRAGTKA 558
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEG+S+ D++KR E K +L+ N +VS+TRL ++NLPKS+ + L LC+ A +
Sbjct: 559 AEGISEADIAKRTRFEELKRARLKDINVYVSKTRLCVHNLPKSVDKNKLFNLCVSAAGGK 618
Query: 606 ASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
+ I + + + K K S G FVEF EH+HA+ ALR LNNNP
Sbjct: 619 GVR----IIECRIMYDKKPVKGQVMGQSLGYGFVEFQEHEHAIQALRHLNNNP 667
>gi|41053419|ref|NP_956615.1| RNA-binding protein 28 [Danio rerio]
gi|30353878|gb|AAH51781.1| Zgc:56258 [Danio rerio]
Length = 864
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/233 (40%), Positives = 133/233 (57%), Gaps = 6/233 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
TIFI NL FD + E +++ FGE+ V++ T KG F +FK+ EAA ++A
Sbjct: 439 TIFIRNLSFDSEEEGLEEVLLQFGELSYVRVVMNPDTGVSKGCAFAQFKSKEAAEKCIAA 498
Query: 487 SKTTSGL-GIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
+ GI L GR+L +L A+++ A + K K T RNLYLA+EGLI GT A
Sbjct: 499 ALDEKEFSGIKLDGRRLNILMAINRDDAAKFKDKKVKTHTGS-RNLYLAREGLIRAGTKA 557
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEG+S+ D++KR E K +L+ N +VS+TRL ++NLPKS+ + L LC+ A +
Sbjct: 558 AEGISEADIAKRTRFEELKRARLKDINVYVSKTRLCVHNLPKSVDKNKLFNLCVSAAGGK 617
Query: 606 ASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
+ I + + + K K S G FVEF EH+HA+ ALR LNNNP
Sbjct: 618 GVR----IIECRIMYDKKPVKGQVMGQSLGYGFVEFQEHEHAIQALRHLNNNP 666
>gi|164661595|ref|XP_001731920.1| hypothetical protein MGL_1188 [Malassezia globosa CBS 7966]
gi|159105821|gb|EDP44706.1| hypothetical protein MGL_1188 [Malassezia globosa CBS 7966]
Length = 963
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 186/812 (22%), Positives = 313/812 (38%), Gaps = 237/812 (29%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
+VT K +++ +G GYV + DA +A+EM G S+ G K
Sbjct: 58 IVTDKETHKSKGVGYVTYTDATDAQKALEMLQGASINGSK-------------------- 97
Query: 61 QEVQAEDIEKTMDNKDGVIS---GAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQK 117
+++Q + ++ D K G+ G E + L+++ PR+AA + L D++ +
Sbjct: 98 RQIQLQWADRKTDVKAGIHRRECGPES-VTDLVQA-----PRRAAAV---LPDRDPDA-- 146
Query: 118 QRVARTVIIGGLLNADMAEEV---HRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDA 174
RT++I GL + A ++ ++ +G V V + K+ ++ D
Sbjct: 147 ---VRTIVITGLASCSPAADIKSIYKRVRKVGDVEHVEFAEAKDPVQN--------AHDT 195
Query: 175 SAVLYTTVKSACASVALLHQKEIKG----------------------------------- 199
+ V + T A +V LH + KG
Sbjct: 196 AYVRFRTPNHAMQAVPKLHAHQFKGAQLSVELKKRVDGALRRDLHMRDDTRKKQKSLQDQ 255
Query: 200 -----GTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDT 254
G VW G + +LI+RN+PF V +++ +F P G ++N+ IP + +
Sbjct: 256 VEQFSGQVWG---SVHGRLERDSRLIVRNLPFDMTVEDLRAVFLPYGALYNITIPTSEEN 312
Query: 255 GLSKGFAFVKFTCKRDAESAIQKFNGQKF--------------GK--------------- 285
G +GFAFV + K DA A+ NG + GK
Sbjct: 313 GRGRGFAFVWYVSKSDASKAMAAINGVQLRHGAAEQALLKKAQGKKGREAAKEALASVHK 372
Query: 286 -----RPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDDSNSSE 340
RP+AVDW++ + + S V++ G +D+ G DA+ + D+ ++
Sbjct: 373 IAQPARPVAVDWSLSQKEWLS-----QVEHAGGEETDASLKRKHG--DAQDSESDAEGAD 425
Query: 341 KEDLPSNADFDE-EVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTVNESAKV 399
+ + N D D+ EVD GN+EQ + +E
Sbjct: 426 GDGVEDNNDGDDKEVDHV-------------------------GNEEQ-VEDDDDEDENE 459
Query: 400 SDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVL 459
+ S + ++ +P L E T+FI NLP+ +E+K F +FG + +
Sbjct: 460 KEDSDIEATAEQPPKLAPPEA----GTTLFIRNLPYQATEQELKDLFRSFGPLRYARITM 515
Query: 460 HQVTKRPKGTGFLKF-------------KTVEAATAAVSASKTTSGLGIF---------- 496
T R +GTGFL F + V+ T A A T F
Sbjct: 516 DPATNRSRGTGFLCFWKRSSADALLRDAEIVQQETGATDAHAKTPSSNPFKVPSVLTADP 575
Query: 497 ---------LKGRQLTVLKALDKKLAHDKEIDKSK-NETNDHRNLYLAKEGLILEGTPAA 546
L GR L +++A+ ++ A E K E D RN +L +EG+ + +
Sbjct: 576 SAPLVSRFMLHGRVLHIVRAVTRETATHLETSARKAREKGDKRNTWLLREGVPFPHSSLS 635
Query: 547 EGVSDDDMSKRQMLHEKKMTKL-QSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAV--- 602
++D + KR + +L +P+ HVS+TRL ++ LP + + LK+L + AV
Sbjct: 636 ALLTDAETEKRMRAFSIRRAQLGANPSLHVSKTRLAVHQLPLFVNNRMLKRLALHAVRAF 695
Query: 603 --------------------------VSR-------ASKQKP----VIKQIKFLQSLKKG 625
SR A K++P V++ LQ+ +
Sbjct: 696 NDEVKQGTRADLDEDEKADKTESANATSRQLSAATDAKKKRPPPSVVVQSKVVLQNERVD 755
Query: 626 KVDTKHYSRGVAFVEFTEHQHALVALRVLNNN 657
+ + SRG F+E HAL LR N N
Sbjct: 756 PLTGQGRSRGYGFLEMRSFPHALKVLRWANGN 787
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + IPF +++ FS VG + +I + +T SKG +V +T DA+ A++
Sbjct: 29 LFVTRIPFNVTNTDLETFFSDVGPLRRAFIVTDKETHKSKGVGYVTYTDATDAQKALEML 88
Query: 279 NGQKF--GKRPIAVDWAVPKNIYSSG 302
G KR I + WA K +G
Sbjct: 89 QGASINGSKRQIQLQWADRKTDVKAG 114
>gi|412992611|emb|CCO18591.1| predicted protein [Bathycoccus prasinos]
Length = 1001
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 99/275 (36%), Positives = 138/275 (50%), Gaps = 48/275 (17%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKF-------KTVE- 478
TIFI NLP D E+++ + FG + S V ++T R KG F F K V+
Sbjct: 536 TIFIRNLPLDATKEQLEAKLKQFGRIKSCRIVYEKITNRSKGVAFCDFWDEASAKKCVDR 595
Query: 479 -------------------AATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLA---HDK 516
A AA++AS+ T + + GR +++ A+ K+ A K
Sbjct: 596 CGDLETTITAQEMKSNKKGAKIAAMTASRRTP---LLVAGRPVSIALAVSKEDAAKMMQK 652
Query: 517 EIDKSKNETN----DHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPN 572
E K+ N D RNLYLAKEG + E +PAA GVS DM KR+ ++ +L++PN
Sbjct: 653 ETTHWKSNMNKEERDKRNLYLAKEGQVHENSPAAIGVSKSDMEKRKRGDAERQARLKNPN 712
Query: 573 FHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQ-KPVIKQIKFLQSLKKGKVDT-- 629
+ +S+TRL + N+P K LK+ +DA RASK P I K L KGK T
Sbjct: 713 YFISKTRLSVRNVPADFDSKLLKRAFLDATQKRASKNTTPKIVNCKLLVDTSKGKAGTTD 772
Query: 630 ------KHYSRGVAFVEFTEHQHALVALRVLNNNP 658
KH +G+ FVEF H+ A+ ALR +NNNP
Sbjct: 773 VETGIQKH--KGIGFVEFDTHEEAMTALRAMNNNP 805
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 5 KGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLE-QRRSKVTQEV 63
KG++ HRGFGYV F++ ED A+++ + GRKIG+ + + ++ + R ++ +E+
Sbjct: 70 KGTHVHRGFGYVTFSMKEDVEEALKLNMKMEIEGRKIGILRSKEKEKVDFKERKRLKREM 129
Query: 64 QAEDIEKT 71
+ E E T
Sbjct: 130 REEKGETT 137
Score = 45.8 bits (107), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ-- 276
+ +RN+P +++ FS +GLV ++ T + +GF +V F+ K D E A++
Sbjct: 37 VFVRNLPHSTTDESLENAFSEIGLVRQAWVAREKGTHVHRGFGYVTFSMKEDVEEALKLN 96
Query: 277 ---KFNGQKFG 284
+ G+K G
Sbjct: 97 MKMEIEGRKIG 107
>gi|190348274|gb|EDK40698.2| hypothetical protein PGUG_04796 [Meyerozyma guilliermondii ATCC
6260]
Length = 713
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 136/499 (27%), Positives = 229/499 (45%), Gaps = 108/499 (21%)
Query: 209 GEGSKTQKWKLIIRNIPFKAKVNE-IKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTC 267
G+ + ++ +LI+RN+P+ K E +K FS G V++ YIP +S GFAF+
Sbjct: 138 GKTVEKRRARLIVRNLPWSCKDPETLKKTFSRFGAVFDAYIPRKKGGQMS-GFAFITMKK 196
Query: 268 KRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDD 327
+ A+ A+++ G K R +AVD AV K+ + + K D SDD+ GD+
Sbjct: 197 QAAADKAVKESVGLKIDGREVAVDLAVEKSKWEAIKEEEPKPEKEDDPEQKDSDDE-GDE 255
Query: 328 DAETASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQ 387
D + DD + S DEE D S L+D +KG
Sbjct: 256 DIK---DDESGS-----------DEESD------------NDSFEELND----LKGEP-- 283
Query: 388 DSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFS 447
+ + KP++ ++ +F+ N+P+D D + +K+ FS
Sbjct: 284 ---------------EEEPEEEYKPRNKQEPYA-------VFVRNIPYDADQDSLKEHFS 321
Query: 448 AFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFL---------- 497
FG+V +PV+ + T +G+ F+ F + + T + + T + +
Sbjct: 322 QFGDVKYALPVIDKETGLARGSAFVAFVSEKPYTTCLENAPTIDSTSVLIPDDVSKEYVY 381
Query: 498 KGRQLTVLKALDKKLAH---DKEIDKSKNET------NDHRNLYLAKEGLILEGTPAAEG 548
+GR L++ A+D+ A +K +++ K D RNLYL EG I E + A+
Sbjct: 382 EGRILSITSAVDRTSASRLAEKNMERKKEALGKSPADKDKRNLYLLNEGRITENSKLAQF 441
Query: 549 VSDDDMSKRQMLHEKKMTKL-QSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS--- 604
+S D+ R+ ++ ++ +L ++P H+S TRL I N+P+SM K LK L AVV
Sbjct: 442 ISKTDLELREKSYKLRVQQLNKNPTLHLSLTRLAIRNIPRSMNAKSLKALGRKAVVQFAT 501
Query: 605 --RASKQKPVIKQ-----IKF-----LQSLKKGK-----------VDTK-----HYSRGV 636
+A +++P+ K+ IK +Q +KK K ++ K SRG
Sbjct: 502 EVKAEQRQPLSKEEVNRSIKLKHEDEIQEMKKSKHAGVVKQAKVVMEVKGTGDVGRSRGY 561
Query: 637 AFVEFTEHQHALVALRVLN 655
F+E+ +H+ AL+ LR LN
Sbjct: 562 GFIEYRDHKTALMGLRWLN 580
>gi|393222363|gb|EJD07847.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 922
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 194/787 (24%), Positives = 308/787 (39%), Gaps = 218/787 (27%)
Query: 7 SNEHRGFGYVQFAVMEDANRAVEM--KNGTSVGGRKIGVKHAMHRASLEQRRSKVTQEVQ 64
+N +G GYV FA+ EDA +E +G + GRK+ V+ A R S + KV E
Sbjct: 59 NNVSKGVGYVSFAIKEDAATTLETIENDGLELNGRKLRVQMA-DRKSKDGSDKKVKSERH 117
Query: 65 AEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQRVARTV 124
V++ A +KL + + RT+
Sbjct: 118 TP-----------VVAHAHAPRTKLEKDPDAI-------------------------RTI 141
Query: 125 IIGGLLNA----DMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVLYT 180
+I GL ++ + ++V +L G+ E +E+ G+A ++
Sbjct: 142 VISGLPSSIDKKTLWKKVRKLEGAENV----------ELVEESGIAH---------ARFS 182
Query: 181 TVKSACASVALLHQKEIKG---GTVWARQLGGEGSKTQKW-------------KLIIRNI 224
T +A +V LH KG ++L T K +LI+RN+
Sbjct: 183 TPSNASHAVEKLHAHVFKGIILSVTLKKRLENLTKTTLKLENNDKSVTPSRASRLIVRNV 242
Query: 225 PFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGL-----------SKGFAFVKFTCKRDAES 273
P+ N+++ +F P G V+++ IP + T +KGFAFV F K+DAE
Sbjct: 243 PWNISENDLRSLFLPFGPVYSIDIPMDKTTNCEDSKSESTKTRAKGFAFVWFFSKKDAEH 302
Query: 274 AIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETAS 333
AI NG+ AV+ +G A NK + ++ +
Sbjct: 303 AIAGVNGR-------AVE---------AGSIVAPTMNKKERQRLRRELRK-----KKSEA 341
Query: 334 DDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTV 393
D ++E D S+ D E D+ +K T GS L+ D AL K E+ K +
Sbjct: 342 GDRETAEGGD-KSDVDDQREDDV-----DKGIETHGSARILAVDWALSKSKWEEAKAKVL 395
Query: 394 NESAK------------VSDVSKLNSSKSKPKSLKQTEGEDE----------------LQ 425
++ +K +SD +++ + + EDE +
Sbjct: 396 SDQSKETADDNEGLDSELSDEDEISGETADSDEGGNEDDEDERSEAEVAIKPILPQTDVG 455
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
TIF+ N+PFD +E++ F AFG + + T R +GTGF+ F E A A+
Sbjct: 456 TTIFVRNVPFDATEDELRILFRAFGPLRYARITMDSDTGRSRGTGFVCFWNKEDADKAIH 515
Query: 486 ASKTTS---------------------------GLGIFLKGRQLTVLKALDKKLA-HDKE 517
S+ S + L GR L V +A+ + A K+
Sbjct: 516 QSELLSRETGTASPKKNPFSLPSLLTPDPSSSLAQSLVLHGRTLDVSRAVTRDAAVRLKD 575
Query: 518 IDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQS-PNFHVS 576
+ + E D RNLYL +EG+I GTPA + ++ KR + + L+S P+ +VS
Sbjct: 576 EGERQREKADKRNLYLLREGVIFPGTPAEATLGPGEIEKRTASYNARRALLKSNPSLYVS 635
Query: 577 RTRLVIYNLPKSMTEKGLKKLCIDAV------VSRASKQKPVIKQIKFLQSL-------- 622
+TRL I LP ++E+ LK+L I A+ V + +Q +++ + +
Sbjct: 636 KTRLSIRQLPLFVSERALKRLGIHAMRAFEEEVKQGERQPLSADELRAEEDIHAQNEGSE 695
Query: 623 ------------KKGKVDT-------------------KHYSRGVAFVEFTEHQHALVAL 651
KKG+ DT K SRG F+E EH AL L
Sbjct: 696 ICTENKVNRRKAKKGERDTGIKQAKVVRQSDRVDALTGKGRSRGYGFLETNEHSDALRVL 755
Query: 652 RVLNNNP 658
R NNNP
Sbjct: 756 RWANNNP 762
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVS-FVPVLHQVTKRPKGTGFLKFKTVEAATAAV 484
+T+F+ NLP+ + + ++K FS + V S FV + + V+ KG G++ F E A +
Sbjct: 24 STLFVSNLPYSITSTDLKTLFSDYAPVRSAFVVLENNVS---KGVGYVSFAIKEDAATTL 80
Query: 485 SASKTTSGLGIFLKGRQLTVLKA 507
+T G+ L GR+L V A
Sbjct: 81 ---ETIENDGLELNGRKLRVQMA 100
>gi|340369829|ref|XP_003383450.1| PREDICTED: RNA-binding protein 28-like [Amphimedon queenslandica]
Length = 730
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 140/235 (59%), Gaps = 11/235 (4%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T+FI N+P+D+D E++ F FG + PVL T++ KG+ F+++KT+++ + + A
Sbjct: 369 TLFIRNVPYDVDKEDLASVFRQFGSIRYCRPVLDANTQKCKGSAFIQYKTIDSISTCIEA 428
Query: 487 SKTTSGLGIFLKGR-QLTVLKALDKK-LAHDKEIDKSKNETN-DHRNLYLAKEGLILEGT 543
+K+ GL I G+ +L V A+ K+ L+H K+ K + D RNLYL +EG I +
Sbjct: 429 AKSDEGLWI---GQDKLMVDMAVSKEELSHMKKAAKQQQLVEKDSRNLYLLEEGYIDPLS 485
Query: 544 PAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVV 603
A + +S D KR +++ KL++P++ +S+TRL + NLP S TEK LK L +
Sbjct: 486 EAGQEMSKIDTRKRMKSLQERKVKLKNPHYFISKTRLSVRNLPASTTEKSLKSLIL---- 541
Query: 604 SRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
+ S ++ ++KQ+K ++S ++ D G FVEF +H AL ALR LNNNP
Sbjct: 542 -QHSDRQAIVKQVKLMRSKEQFLSDGLGRPVGFGFVEFKDHHSALTALRNLNNNP 595
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 128/311 (41%), Gaps = 59/311 (18%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
+V KG ++ RGFGYV + +DA +A + + R + + A H+ + +
Sbjct: 46 VVKNKGESQCRGFGYVTYFKKDDAAKA--KSHVKVISSRPVHMMFARHKEKEGEEEEEGE 103
Query: 61 QEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQRV 120
++ ++ + K S + + G+T+ L L+D D + KQ
Sbjct: 104 EQSNDDEEDDDN---------VFKSDSNVYDIGRTI-------LITQLSD--DTTNKQLR 145
Query: 121 ARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLP-KEELEQHGLAQEGCKMDASAVLY 179
R IG + S+ YP+P K+EL ++V +
Sbjct: 146 VR-------------------CRKIGNIESLEYPVPGKDEL-------------TASVTF 173
Query: 180 TTVKSACASVALLHQKEIKGGTVWARQLGGEGSKT-----QKWKLIIRNIPFKAKVNEIK 234
T K A ++ L + + G T+ L + +K +LI+RNI FK +++
Sbjct: 174 KTHKEAKKALDTLQSRTLNGKTIKVDLLSKVIKRVNRKSLKKSRLIVRNISFKTTEDDLN 233
Query: 235 DMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAV 294
++FS V + + N + S G+ FV+ DA A++ N +F R I VDW +
Sbjct: 234 ELFSAHCPVISTQVVRN-EKNKSLGYGFVQLESFVDAHKALKNLNETEFKGRKIRVDWVL 292
Query: 295 PKNIYSSGGAA 305
P+ Y S A
Sbjct: 293 PREKYQSQKEA 303
>gi|325189852|emb|CCA24334.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 938
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 194/754 (25%), Positives = 324/754 (42%), Gaps = 151/754 (20%)
Query: 11 RGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSK--------VTQE 62
RGF +V+FA+ DA A+E N + GRK+ + ++ +++ +SK V ++
Sbjct: 53 RGFAFVRFALESDAVLAIEKMNKSEFQGRKLCI---VYTTFIDRCKSKDGTAIAPNVEEK 109
Query: 63 VQAEDI--EKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQRV 120
D+ + T D+KD ++G +SK +ES +T G Q ++
Sbjct: 110 SDENDVADKLTSDSKD--VAGKPTPNSKDVES--------VSTNGKQSERNARRRQHRQF 159
Query: 121 ARTVIIGGLLNADMAEEVHRLAGSIGTVCS---------VTYPLPKEELEQHGLAQEGCK 171
+R + L A + + + G + V+ + K E++++ L ++ K
Sbjct: 160 SRQLEESKELKASLEDRSIAIYGFSDKITDKILWKRIKKVSKHVDKLEMKEYLLRRKENK 219
Query: 172 MDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGG--EGSKTQK--WKLIIRNIPFK 227
A+ V + K +V L Q +KG + R L + K +K +LI+RN+ F+
Sbjct: 220 KYAT-VAFKMTKEVPVAVMKLDQHILKGDKLTVRPLRSFLDALKVKKDGLRLIVRNLSFQ 278
Query: 228 AKVNEIKDMFSPVGLVWN---VYIPHNTDT--------------GLSKGFAFVKFTCKRD 270
A ++ +FSP G V V +P +T G S+GF FV+F
Sbjct: 279 ATDEDLHRVFSPFGAVSEAHVVRLPVDTIAVSDNDDKEGSVSILGRSRGFGFVQFNEIEA 338
Query: 271 AESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDL----GD 326
A SA++ NG K R I VD+AVPK Y + + + + +DDL D
Sbjct: 339 AASAVKAINGNKLKGREIVVDFAVPKTDY---------LKQNEESVKTSMNDDLDNAEAD 389
Query: 327 DDAETASDDSNSSEKEDLPSNADF-DEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNK 385
DAE+ + + E P + D D VD +D+ A+
Sbjct: 390 TDAESIPEANIDDNGETEPQDEDMTDISVD-------------------NDEEAVESDGA 430
Query: 386 EQDSDKTVNESAK-VSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQ 444
++ D + + K + +V+ N+ KS+ L E +L+ T+F+ N+ F +E +K
Sbjct: 431 SEECDNGDDTAIKDIGEVTTDNTQKSRTGHLDTNE---QLERTLFLRNVSFQTTDEGLKT 487
Query: 445 RFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTV----------------------EAATA 482
F FG V V +K KG F++FK + + A+
Sbjct: 488 FFQTFGGVEYTRIVYDPNSKLSKGVAFVRFKDIKPVNYLLDRAQAIQSLLENTQQDLASR 547
Query: 483 AVSASKTTSGL-------------GIFLKGRQLTVLKALDKKLAHD-KEIDKSKNET-ND 527
+V+ +K G+ + L GR L++ +A+ K+ A + I + ++ D
Sbjct: 548 SVATTKNERGMTDVYTASALADGSALILDGRVLSLARAVRKEQAVELASITPTNTKSGKD 607
Query: 528 HRNLYLAKEGLILEGTPAAEG--VSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNL 585
RNLYLA EG I +A+ + D+ KR+ ++K KL++P + +S RL NL
Sbjct: 608 KRNLYLAYEGTINVNKISADQLMLPKLDIEKRRRALKEKKEKLKNPMYFISPVRLSFRNL 667
Query: 586 PKSMTEKGLKKLCIDAVVS------------RASKQKPVIKQIKFLQSLKKGKV----DT 629
+ + LKKL DA + ++ Q P+ ++ K ++ KV D+
Sbjct: 668 ASHVDDTILKKLVRDAAICGMEGNLVQKKEIKSELQLPLQEKSKIPVKVRMAKVIRDQDS 727
Query: 630 KH-----YSRGVAFVEFTEHQHALVALRVLNNNP 658
SRG FVEF H HAL ALR LNNNP
Sbjct: 728 ARPGKIARSRGYGFVEFAHHVHALCALRELNNNP 761
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 7/109 (6%)
Query: 214 TQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN----TDTGLSKGFAFVKFTCKR 269
+ K + +RN+PF+ E++D+FS VG V V + N D L++GFAFV+F +
Sbjct: 5 SSKTTIFVRNLPFQITSKEVEDLFSQVGPVKKVDLIKNKGKSKDDTLTRGFAFVRFALES 64
Query: 270 DAESAIQKFNGQKFGKRPIAVDWA--VPKNIYSSGGA-AAGVQNKGDGN 315
DA AI+K N +F R + + + + + G A A V+ K D N
Sbjct: 65 DAVLAIEKMNKSEFQGRKLCIVYTTFIDRCKSKDGTAIAPNVEEKSDEN 113
>gi|310793176|gb|EFQ28637.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 769
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 132/493 (26%), Positives = 221/493 (44%), Gaps = 73/493 (14%)
Query: 218 KLIIRNIPFKAKVNE-IKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
KLIIRN+P+ K +E + +F G+V +P N G KGF FV +++AE A++
Sbjct: 160 KLIIRNLPWSIKTSEQLGALFRAYGVVKFADLPQNK--GKLKGFGFVTLRGRKNAEKALE 217
Query: 277 KFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDDS 336
NG+ RP+AVDWAV K+ + V + ++ ETA +D
Sbjct: 218 -MNGKVIDGRPVAVDWAVDKSEWDQVNGTKEVPEDDEKPKSKKQKAATAKEEVETAKNDK 276
Query: 337 NSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTVNES 396
E P AD D E + ++N L D+ K E + + +
Sbjct: 277 AGEE----PEGADADLENFMKNHMMN-----------LEDEEDSDKDESENEDEDEDLDL 321
Query: 397 AKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFV 456
++ + ++++ K + +T+ + ++T+FI NLPF + ++++K+ F FG V
Sbjct: 322 SEDDEEGAASNARDDKKPVTKTQTSTDNKSTLFIRNLPFTVTDDQLKEHFVKFGPVRYAR 381
Query: 457 PVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIF------------------LK 498
V+ + T+RP GTGF+ F E A A + + + + L
Sbjct: 382 VVMDRATERPAGTGFVCFVNEEDAKACIKGAPRSQPSALLTKHSVLQDETADKDGRYTLD 441
Query: 499 GRQLTVLKALDKKLAHDKEIDKS-KNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKR 557
GR L V +A+ K A D S K D R L+L EG I + ++ +++ R
Sbjct: 442 GRLLQVAQAVSKDDAERLAADGSAKRREKDKRRLFLLNEGQIDTRSALYHKLTPNEIKMR 501
Query: 558 QMLHEKKMTKLQS-PNFHVSRTRLVIYNLPKSMTEKGLKKL----CI------------- 599
+ +++ +QS P H+S TRL + N+P+++ K LK+L C+
Sbjct: 502 EDSAKQRKKLVQSNPTLHISLTRLAVRNIPRNIGSKELKELARKACVEFAKDVKEGKRQP 561
Query: 600 --------------DAVVSRASKQKPVIKQIKF-LQSLKKGKVD--TKHYSRGVAFVEFT 642
DA R K+K +++Q K +S + KV + SRG F+E++
Sbjct: 562 LSKEEKVRDAKEAKDAERERKLKRKGIVRQAKIEFESREGTKVPEASGGKSRGYGFIEYS 621
Query: 643 EHQHALVALRVLN 655
H+ AL+ LR LN
Sbjct: 622 SHRWALMGLRFLN 634
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +R++P A + D FS V + + + T S+G+ FV T DA A +K
Sbjct: 51 LFVRSLPATATSESLTDFFSEHFPVKHATVVLDKATKASRGYGFVTLTDAEDAMEAKKKL 110
Query: 279 NGQKFGKRPIAVDWAVPKNI----YSSGGAAAGVQNK 311
N + R I VD A ++ + G AAAG + K
Sbjct: 111 NNMMWEGRRIRVDVAEARHRDGKESAVGAAAAGQKQK 147
>gi|363749721|ref|XP_003645078.1| hypothetical protein Ecym_2541 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888711|gb|AET38261.1| Hypothetical protein Ecym_2541 [Eremothecium cymbalariae
DBVPG#7215]
Length = 675
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 136/502 (27%), Positives = 212/502 (42%), Gaps = 127/502 (25%)
Query: 216 KWKLIIRNIPFKAKVNE-IKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESA 274
K KLIIRN+P+ + E +K +FS G V IP D L GFAFV + E A
Sbjct: 130 KPKLIIRNMPWSCRDAEKLKKIFSRFGTVVETTIPRKRDGRLC-GFAFVTMKKLANCEKA 188
Query: 275 IQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASD 334
I+ G K R +AVD+AV KN + E +
Sbjct: 189 IEGSKGLKIDGRDVAVDFAVQKNKW------------------------------EDYKN 218
Query: 335 DSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTVN 394
NS+E++ D DEE AL+K + DS N
Sbjct: 219 LQNSTEEQKEEETKDADEE------------------------GALLKSSANDDSSDEEN 254
Query: 395 E---SAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGE 451
E + S+ ++ + +KPK+ ++ + ++FI N+P+D E +++ F+ FG
Sbjct: 255 EDDSEPEPSNDEEIRNPDNKPKNRRE-------KFSVFIRNVPYDATQESLEEHFAQFGP 307
Query: 452 VVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFL----------KGRQ 501
V +PV+ + T PKGT F FKT E + + + + + +GR
Sbjct: 308 VKYVLPVVDRETGLPKGTAFAAFKTQETYDNCIKNAPSVVNTSLLISDDVLPQYVYEGRV 367
Query: 502 LTVLKALDKKLAH---------DKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDD 552
L++ LDK A+ +E+ D RNLYL EG I EG+ A+ +S
Sbjct: 368 LSITPTLDKDSANRMADANALKRRELFGIAPGEKDRRNLYLLNEGRITEGSKLAQLLSTA 427
Query: 553 DMSKRQMLHEKKMTKL-QSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRAS---- 607
DM R+ ++ ++ +L ++P +S TRL + N+P++M E LK L AVV A+
Sbjct: 428 DMEVREKSYQLRVEQLKKNPELSLSMTRLAVRNIPRAMNEAALKILARKAVVEFATEVKE 487
Query: 608 ----------------------------------KQKPVIKQIKFLQSLKKGKVDTKHYS 633
K++ ++KQ K + +K V S
Sbjct: 488 GKRHPLSKEEISRSTKDKYKLMTAEEVTALKSREKKRGLVKQSKIIMEVKGSVV---GRS 544
Query: 634 RGVAFVEFTEHQHALVALRVLN 655
+G FVE+ +H+ AL+ LR LN
Sbjct: 545 KGYGFVEYRDHKSALMGLRWLN 566
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 208 GGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTC 267
G G + L +RNIPF A E+ D FS + + I + D G S+GF FV F
Sbjct: 7 GLNGHNLDQKTLFVRNIPFTATDAELTDFFSQFAPLKHAIIVKDGD-GNSRGFGFVSFAV 65
Query: 268 KRDAESAIQKFNGQKFGKRPIAVDWA 293
D ++A+ + KF R + VD A
Sbjct: 66 DEDTQTALNEGRKMKFQGRLLRVDIA 91
>gi|322711864|gb|EFZ03437.1| RNA recognition motif containing protein [Metarhizium anisopliae
ARSEF 23]
Length = 731
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 141/499 (28%), Positives = 227/499 (45%), Gaps = 90/499 (18%)
Query: 218 KLIIRNIPFKAKVNE-IKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
KLI+RN+P+ K +E + ++F G V +P + G +GF FV K++AE A++
Sbjct: 147 KLIVRNLPWSIKTSEQLSNLFRSYGKVKFSDLPQSK--GKLRGFGFVTIRGKKNAEKALE 204
Query: 277 KFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDDS 336
NG++ R +AVDWAV K + DL +D ++
Sbjct: 205 GVNGKEIDGRTLAVDWAVDKETWE-------------------KQQDLEAEDEVPNREEE 245
Query: 337 NSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSL-----SDDSALVKGNKEQDSDK 391
N ++++ LP A D + + T S P +D +K + + D+
Sbjct: 246 NRTDEKTLPETA---SSSDDDKDDNDNDDDGTASKPDKHNELDADLENFMKNHMQNMEDE 302
Query: 392 TVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGE 451
++ D K+++SKS + K T+ +T+FI NLPF +E++K FS FG
Sbjct: 303 DEDDEDDDEDDDKVDTSKSSAEK-KTTDN----SSTVFIRNLPFTTTDEQLKGFFSHFGA 357
Query: 452 VVSFVPVLHQVTKRPKGTGFLKF----------KTVEAATAAVSASKTTSGL-------G 494
V V+ ++T++P GTGF+ F K A+ + SK + L G
Sbjct: 358 VRYARVVIDKITEKPAGTGFVCFVKQSDAKSCIKEAPRPNASAAGSKPSLLLDENADPSG 417
Query: 495 IF-LKGRQLTVLKALDK-KLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDD 552
+ L GR L V +A++K + A+ + +K D R LYL EG I G+P + +S
Sbjct: 418 KYTLDGRLLQVAQAVNKAEAANLADNSLAKRREKDKRRLYLLSEGAIGRGSPLFDLLSPS 477
Query: 553 DMSKRQMLHEKKMTKLQS-PNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVV-------- 603
++ RQ ++ +QS P+ H+S TRL + N+P+++ K LK+L AVV
Sbjct: 478 EIQMRQASAAQRKKLVQSNPSLHLSLTRLSLRNIPRNIGSKELKELARKAVVGFAVDVKE 537
Query: 604 -----------------------SRASKQKPVIKQIKFL-QSLKKGKVDTKH---YSRGV 636
R K K +++Q K + +S + KVD SRG
Sbjct: 538 GLRQPLSKEENARDGKDAKEKERQRKLKGKGIVRQAKVVFESNQGSKVDEMSGAGKSRGY 597
Query: 637 AFVEFTEHQHALVALRVLN 655
F+E+T H AL+ LR LN
Sbjct: 598 GFIEYTSHHWALMGLRYLN 616
>gi|146413741|ref|XP_001482841.1| hypothetical protein PGUG_04796 [Meyerozyma guilliermondii ATCC
6260]
Length = 713
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 135/499 (27%), Positives = 228/499 (45%), Gaps = 108/499 (21%)
Query: 209 GEGSKTQKWKLIIRNIPFKAKVNE-IKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTC 267
G+ + ++ +LI+RN+P+ K E +K F G V++ YIP +S GFAF+
Sbjct: 138 GKTVEKRRARLIVRNLPWSCKDPETLKKTFLRFGAVFDAYIPRKKGGQMS-GFAFITMKK 196
Query: 268 KRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDD 327
+ A+ A+++ G K R +AVD AV K+ + + K D SDD+ GD+
Sbjct: 197 QAAADKAVKESVGLKIDGREVAVDLAVEKSKWEAIKEEEPKPEKEDDPEQKDSDDE-GDE 255
Query: 328 DAETASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQ 387
D + DD + S DEE D S L+D +KG
Sbjct: 256 DIK---DDESGS-----------DEESD------------NDSFEELND----LKGEP-- 283
Query: 388 DSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFS 447
+ + KP++ ++ +F+ N+P+D D + +K+ FS
Sbjct: 284 ---------------EEEPEEEYKPRNKQEPYA-------VFVRNIPYDADQDSLKEHFS 321
Query: 448 AFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFL---------- 497
FG+V +PV+ + T +G+ F+ F + + T + + T + +
Sbjct: 322 QFGDVKYALPVIDKETGLARGSAFVAFVSEKPYTTCLENAPTIDSTSVLIPDDVSKEYVY 381
Query: 498 KGRQLTVLKALDKKLA---HDKEIDKSKNET------NDHRNLYLAKEGLILEGTPAAEG 548
+GR L++ A+D+ A +K +++ K D RNLYL EG I E + A+
Sbjct: 382 EGRILSITSAVDRTSALRLAEKNMERKKEALGKSPADKDKRNLYLLNEGRITENSKLAQF 441
Query: 549 VSDDDMSKRQMLHEKKMTKL-QSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS--- 604
+S D+ R+ ++ ++ +L ++P H+S TRL I N+P+SM K LK L AVV
Sbjct: 442 ISKTDLELREKSYKLRVQQLNKNPTLHLSLTRLAIRNIPRSMNAKSLKALGRKAVVQFAT 501
Query: 605 --RASKQKPVIKQ-----IKF-----LQSLKKGK-----------VDTK-----HYSRGV 636
+A +++P+ K+ IK +Q +KK K ++ K SRG
Sbjct: 502 EVKAEQRQPLSKEEVNRSIKLKHEDEIQEMKKSKHAGVVKQAKVVMEVKGTGDVGRSRGY 561
Query: 637 AFVEFTEHQHALVALRVLN 655
F+E+ +H+ AL+ LR LN
Sbjct: 562 GFIEYRDHKTALMGLRWLN 580
>gi|336366226|gb|EGN94574.1| hypothetical protein SERLA73DRAFT_96776 [Serpula lacrymans var.
lacrymans S7.3]
Length = 889
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 186/772 (24%), Positives = 299/772 (38%), Gaps = 194/772 (25%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEM--KNGTSVGGRKIGVKHAMHRASLEQRRSK 58
+V + G+ +G GYV FA+ EDA A + +NG ++ GRK+ + A
Sbjct: 52 VVLEHGTGVSKGVGYVSFAIKEDAVSAFDTITENGITLQGRKLRTQWA------------ 99
Query: 59 VTQEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQ 118
D+K K E G VK KA S Q
Sbjct: 100 --------------DSK-----------PKDKEKGDVVKEPKARPTS-------HVSHPQ 127
Query: 119 RV-----ARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHG------LAQ 167
+V RT++I GL + A+ + + V +P E ++ A
Sbjct: 128 KVNDPLAIRTIVISGLPTSIDAKTLWKKIRKHKGAEKVDWPAKTAEGDEDATSATVIFAT 187
Query: 168 EGCKMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFK 227
+A L+ V C L +++ TV A++ G +LI+RN+PF
Sbjct: 188 SALAQEAVNKLHAHVFKGCLLSVTLKKRQDNLATVPAKKTKGPAPNRSS-RLIVRNLPFD 246
Query: 228 AKVNEIKDMFSPVGLVWNVYIPHNTDTGL-----------------SKGFAFVKFTCKRD 270
+++ +F P G +++++IP G +KGFAFV K+D
Sbjct: 247 LTEQDLRAIFLPHGPIYSIHIPMTKSQGTQDSKEEADDSTAVTKARAKGFAFVWMLSKKD 306
Query: 271 AESAIQKFNGQKFGK------RPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDL 324
AE A+ K NG K R IAVDWA+ K + S + ++
Sbjct: 307 AEQALAKCNGMKVRAGMAEHIRVIAVDWALSKEKWQ--------------EEISKMEGEV 352
Query: 325 GDDDAETASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGN 384
D D + S E ED SN++ E + + L + +DS+
Sbjct: 353 EDGDVDMTSIPGRDEEDEDSDSNSENQSEDESQDDDDDNL-----GVHEDGEDSS----- 402
Query: 385 KEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQ 444
+ SD V + + D + P+S T+F+ N+PF+ D +E++
Sbjct: 403 NSEFSDGEVEDGGEAQDQEPVKPQLPPPES----------GTTLFVRNVPFEADEDELRT 452
Query: 445 RFSAFGEVVSFVPVLHQVTKRPKGTGFLKF-------KTVEAA---TAAVSASK------ 488
F FG + + T R +GTGF F K VE + A + S+
Sbjct: 453 LFRTFGPLRYARITVDPETGRSRGTGFACFWNKVDADKVVEQSDILRAETTGSQPQLKKN 512
Query: 489 -------------TTSGLGIFLKGRQLTVLKALDKKLAHD-KEIDKSKNETNDHRNLYLA 534
+ + + L GR L V++A+ + A KE + + E D RNLYL
Sbjct: 513 PFTLPSILTPDPSSITARSLVLHGRTLDVVRAVTRDEAGKLKEDGEKRREKADKRNLYLL 572
Query: 535 KEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQS-PNFHVSRTRLVIYNLPKSMTEKG 593
+EG+I +P AE ++ ++ KR + + L+S P+ ++S+TRL + +P ++E+
Sbjct: 573 REGVITPNSPDAETLTPTEVEKRTLSFNARRALLRSNPSLYISKTRLSVRQVPLFVSERV 632
Query: 594 LKKLCI------DAVVSRASKQK---------------------PV-------------- 612
LK+L I +A V + S++ PV
Sbjct: 633 LKRLAIHATRAFEAEVKKGSREGLSPDELSKDVEEEEQGEKNDVPVKEEKNEGKSQKQKK 692
Query: 613 ------IKQIKFL-QSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNN 657
+KQ K + Q + V K SRG F+E +H AL LR NNN
Sbjct: 693 GGRPTSVKQSKIVRQQDRVDPVTGKGRSRGYGFIEMHKHADALRVLRWANNN 744
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
+T+F+ NLP+ + +++ FS F V + VL T KG G++ F E AVS
Sbjct: 21 STLFVSNLPYTATSTDLQTLFSDFAPVRTAFVVLEHGTGVSKGVGYVSFAIKE---DAVS 77
Query: 486 ASKTTSGLGIFLKGRQL 502
A T + GI L+GR+L
Sbjct: 78 AFDTITENGITLQGRKL 94
Score = 45.8 bits (107), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+P+ A +++ +FS V ++ TG+SKG +V F K DA SA
Sbjct: 23 LFVSNLPYTATSTDLQTLFSDFAPVRTAFVVLEHGTGVSKGVGYVSFAIKEDAVSAFDTI 82
Query: 279 --NGQKFGKRPIAVDWA 293
NG R + WA
Sbjct: 83 TENGITLQGRKLRTQWA 99
>gi|326427500|gb|EGD73070.1| hypothetical protein PTSG_12213 [Salpingoeca sp. ATCC 50818]
Length = 1010
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 136/242 (56%), Gaps = 12/242 (4%)
Query: 418 TEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTV 477
TEG +T+F+ ++ D ++++K+ S FG V + V + T P+GT F++F +
Sbjct: 588 TEG-----HTVFVRDMSLDSTHDDLKELMSQFGTVKYALLVKDKQTDLPRGTAFVRFSSK 642
Query: 478 EAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEG 537
E A A + A+ + L RQL V +AL K+ +++ ++ + D RNLYL +EG
Sbjct: 643 EEADACLEAASNPDA-PLMLDTRQLAVSRALPKRDVEERQKERKEKPKVDRRNLYLLREG 701
Query: 538 LILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKL 597
I PA +SD D +RQ L + K ++PN +S+TRL I+N+P ++ EK LK++
Sbjct: 702 AIPTDHPAYASLSDADKQRRQRLELEGKEKAKNPNMAISKTRLTIHNIPLTVDEKQLKQI 761
Query: 598 CIDAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNN 657
+ + K I Q+K ++ ++ D K SRG F+EF +H+ AL ALR LNN+
Sbjct: 762 VRNTI------GKVKITQVKIVRDEERPGPDGKPRSRGFGFIEFGKHEAALEALRKLNNS 815
Query: 658 PS 659
PS
Sbjct: 816 PS 817
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +RN+ F +++++FS +G V +I T G S+GF +V F + DA A ++
Sbjct: 26 LFVRNLAFSVTAEDLENVFSDIGPVRQCFIV-KTPQGGSRGFGYVLFGMREDAMEAQKQL 84
Query: 279 NGQKFGKRPIAVDWA 293
+G K RP++V +A
Sbjct: 85 DGHKLHGRPMSVQFA 99
>gi|298714006|emb|CBJ27238.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1076
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/279 (35%), Positives = 143/279 (51%), Gaps = 46/279 (16%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAA----TA 482
TIF+ N+ FD EEVK+RFS FG+V + V + T P+GT F+K+ + A A
Sbjct: 559 TIFVRNVAFDSSQEEVKERFSEFGDVRLALLVKDRATGMPRGTAFVKYSKRDDADRCLAA 618
Query: 483 AVSAS-----KTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETN-DHRNLYLAKE 536
A+ A+ + + G I+L R L V +A+D++ A + K + D RNLYLA E
Sbjct: 619 AIGATDPAHARDSGGSCIYLGSRALHVTRAVDREEAGRLTVGAQKRVGHKDKRNLYLADE 678
Query: 537 GLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLK- 595
GL+LE + AAEG + DM KR + + K +KL++P F VS TRL + N+ + +T+ LK
Sbjct: 679 GLVLEDSGAAEGAAKSDMEKRVLARKDKKSKLKNPIFFVSPTRLSVRNIGRHVTDGKLKS 738
Query: 596 --------------------KLCIDAVVSRASKQKPVIKQIKFL--QSLKKGKV----DT 629
+L ++A + P QI + S+ K K+ D
Sbjct: 739 MAAAAARAGIQAGRANPQDVRLYLEAQGEEFAAITPKRLQIPAVTGNSVVKAKIIRDMDK 798
Query: 630 K---------HYSRGVAFVEFTEHQHALVALRVLNNNPS 659
K H S+G FVEF+ H AL ALR +NNNP+
Sbjct: 799 KPSTDDPSELHPSKGYGFVEFSHHGQALAALRQMNNNPA 837
>gi|158300816|ref|XP_320641.4| AGAP011884-PA [Anopheles gambiae str. PEST]
gi|157013343|gb|EAA00475.4| AGAP011884-PA [Anopheles gambiae str. PEST]
Length = 453
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 139/251 (55%), Gaps = 14/251 (5%)
Query: 409 KSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKG 468
K+K K K+ E E+ + +F+ NLP+D++ E+K+ S FG V + +++ KG
Sbjct: 12 KAKIKQEKRNEVEEGRE--VFVKNLPYDVEANELKEIMSQFGIVEKVLINRERISGHSKG 69
Query: 469 TGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDH 528
T F+ FK ++A + S L + + + + ++ AL KK D+E K + D
Sbjct: 70 TAFVIFKLKDSAQLSCRQS-----LKLKVHDQYVEIMPALRKKDILDREKAKQEKRAKDS 124
Query: 529 RNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKS 588
RNLYL KEGLI+ G+PAA+GVS DMS+R L ++ L++ N V+R RL I+N+P+S
Sbjct: 125 RNLYLLKEGLIMAGSPAAKGVSQSDMSQRLRLEQRSNEILKNFNRFVARDRLTIHNIPQS 184
Query: 589 MTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHAL 648
T + L+K+ I+ R ++ + ++ + SRG FV F +H+ AL
Sbjct: 185 YTNEDLRKMIINFTSYRP-------RECRVMRDNRPSFGSAAGRSRGYGFVSFPKHEIAL 237
Query: 649 VALRVLNNNPS 659
LR LNNNPS
Sbjct: 238 DVLRKLNNNPS 248
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAE 272
+ ++N+P+ + NE+K++ S G+V V I +G SKG AFV F K A+
Sbjct: 29 VFVKNLPYDVEANELKEIMSQFGIVEKVLINRERISGHSKGTAFVIFKLKDSAQ 82
>gi|346971381|gb|EGY14833.1| nucleolar protein [Verticillium dahliae VdLs.17]
Length = 785
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 137/500 (27%), Positives = 230/500 (46%), Gaps = 74/500 (14%)
Query: 218 KLIIRNIPFKAKVN-EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
KLIIRN+P+ K +++ +F G + +P N G +GF FV +++AE+AI+
Sbjct: 151 KLIIRNLPWSIKTPAQLQALFQSYGKIKFADLPMNN--GRLRGFGFVTIRGEKNAENAIK 208
Query: 277 KFNGQKFGKRPIAVDWAVPKNIY-SSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDD 335
NG+ R IAVDWAV K + + GA A + S + +
Sbjct: 209 AMNGKGIDGRTIAVDWAVEKEEWDNQRGAEADTEK--PAKSAKKIKEKPEEKPESKTEKT 266
Query: 336 SNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSD---KT 392
+ S K P++ D D +++ + N + +T G+L D + +++ D D K
Sbjct: 267 AKKSVKSAQPASDDADAQLNA--DLENFMKNTMGNLEDEEDSDEEEESDEDDDEDEGAKL 324
Query: 393 VNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEV 452
+ ++ + +P++ K+T D +T+FI NLPF +E++K F+ FG V
Sbjct: 325 EESDEEEESDAEESKPTEQPETAKKTTNND---STVFIRNLPFTTTDEQLKSHFAVFGPV 381
Query: 453 VSFVPVLHQVTKRPKGTGFLKF----------KTVEAATAA-------VSASKTTSGLGI 495
V+ + T RP GTGF+ F K + AA + +T G
Sbjct: 382 RYARVVMDRATDRPAGTGFVCFFDEADSKACVKNAPRSQAAPLVGKHSILQDETADPEGK 441
Query: 496 F-LKGRQLTVLKALDK----KLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVS 550
+ L GR L+V +A+ K +LA D + K ND R L+L +EG + + + +S
Sbjct: 442 YTLDGRLLSVAQAVSKDDAGRLAADAGV---KRRANDKRRLFLLEEGQLDTRSAMYKSLS 498
Query: 551 DDDMSKRQMLHEKKMTKLQ-SPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVV------ 603
++ R +++ ++ +P+ H+S TRL + N+P SMT K LK+L +A V
Sbjct: 499 QAEIMMRDKSRQQRKKLVEGNPSLHISLTRLAVRNIPHSMTSKELKQLAREACVGFATDV 558
Query: 604 -------------SRASKQ------------KPVIKQIKFLQSLKKGKVDTKHY---SRG 635
+RA+K+ K +++Q K + G T+ SRG
Sbjct: 559 TNGLRQPLSKEEKARANKEAKEAEHNRKLKGKGIVRQAKIEFESRDGSKVTEAAGGKSRG 618
Query: 636 VAFVEFTEHQHALVALRVLN 655
F+E++ H+ AL+ LR LN
Sbjct: 619 YGFIEYSSHRWALMGLRWLN 638
>gi|169610962|ref|XP_001798899.1| hypothetical protein SNOG_08590 [Phaeosphaeria nodorum SN15]
gi|111062638|gb|EAT83758.1| hypothetical protein SNOG_08590 [Phaeosphaeria nodorum SN15]
Length = 742
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 153/523 (29%), Positives = 225/523 (43%), Gaps = 139/523 (26%)
Query: 215 QKWKLIIRNIPFKAKVNE-IKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAES 273
Q K+I+RN+P+ K E + F G V V +P +G +GFAFV K+ AE
Sbjct: 147 QAPKIIVRNLPWSIKTPEQLGKHFLSYGKVNFVTLPKKP-SGELRGFAFVALRGKKHAER 205
Query: 274 AIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETAS 333
AIQ NG++ R IAVDWAV ++ + + GD DDD DAE++
Sbjct: 206 AIQGLNGKEIDGRTIAVDWAVDRDTWQ---GLQKTEQDGDDAKAGAEDDDEDMSDAESSV 262
Query: 334 D--------DSNSSEKEDLP-SNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGN 384
+ S + EDL SN D+ E+VD
Sbjct: 263 VSSEDDSDAEEGSEDNEDLDDSNTDY-EDVD----------------------------- 292
Query: 385 KEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQ 444
DSD E V +L+ + K + T+F+ NLPF + +E +K+
Sbjct: 293 ---DSD----EEGGV----QLDDERPKREEF-----------TVFVRNLPFTVTDESLKE 330
Query: 445 RFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVE-----------------------AAT 481
F FG V VL + T+RPKGTGF+ F E +T
Sbjct: 331 HFEQFGGVRFARVVLDRETERPKGTGFVSFYGEEDMINCLKGVPKVKLQSRNVDKKDGST 390
Query: 482 AAVS------ASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETN---DHRNLY 532
V+ A SG L+GR L + +A+DK A + + + + D R LY
Sbjct: 391 ITVTHSVLEDADADPSGR-YTLEGRILQLSRAVDKSEATRLTAEGAASRFSRDKDKRRLY 449
Query: 533 LAKEGLILEGTPAAEGVSDDDMSKRQ---MLHEKKMTKLQSPNFHVSRTRLVIYNLPKSM 589
L EG I +P + +S ++ R+ ML +K++ ++P+ H+S TRL I N+P+S+
Sbjct: 450 LLSEGTIPSNSPLYQQLSPSEIKMREESAMLRKKQIQ--ENPSLHLSLTRLSIRNIPRSI 507
Query: 590 TEKGLKKLCIDAVV--------------SR------------ASKQKP-----VIKQIKF 618
T K LK+L A+V SR A KQ+ ++KQ K
Sbjct: 508 TSKDLKQLARAAIVGFAADVKAGKRNKLSREEVMRGGQAMLVAEKQRKKRGVGIVKQAKV 567
Query: 619 LQSLKKG-KV--DT-KHYSRGVAFVEFTEHQHALVALRVLNNN 657
+ G KV DT SRG F+E+ H++AL+ LR LN +
Sbjct: 568 VFETPAGSKVGEDTGAGRSRGYGFIEYYTHRNALMGLRWLNGH 610
>gi|302406056|ref|XP_003000864.1| nucleolar protein [Verticillium albo-atrum VaMs.102]
gi|261360122|gb|EEY22550.1| nucleolar protein [Verticillium albo-atrum VaMs.102]
Length = 769
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 135/500 (27%), Positives = 229/500 (45%), Gaps = 73/500 (14%)
Query: 218 KLIIRNIPFKAKVN-EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
KLIIRN+P+ K +++ +F G + +P N G +GF FV +++AE+AI+
Sbjct: 134 KLIIRNLPWSVKTPAQLQALFQSYGKIKFADLPMNN--GRLRGFGFVTIRGEKNAENAIK 191
Query: 277 KFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDDS 336
NG+ R IAVDWAV K + + A V + S + + +
Sbjct: 192 AMNGKGIDGRTIAVDWAVEKEEWDNQQGAE-VDTEKPVRSAKKIKEKPEEKPESKTEKTA 250
Query: 337 NSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSD----KT 392
S K P++ D D +++ + N + +T G+L D + +++ D + K
Sbjct: 251 KKSVKSAQPASDDADAQLNA--DLENFMKNTMGNLEDEEDSDEEEESDEDDDEEDDGAKL 308
Query: 393 VNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEV 452
+ ++ + +P++ K+T D +T+FI NLPF +E++K F+ FG V
Sbjct: 309 EESDEEEESDAEESKPTEQPEAAKKTTNND---STVFIRNLPFTTTDEQLKSHFARFGPV 365
Query: 453 VSFVPVLHQVTKRPKGTGFLKF----------KTVEAATAA-------VSASKTTSGLGI 495
V+ + T RP GTGF+ F K + AA + +T G
Sbjct: 366 RYARVVMDRATDRPAGTGFVCFFDEADSKACVKNAPRSQAAPLVGKHSILQDETADPEGK 425
Query: 496 F-LKGRQLTVLKALDK----KLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVS 550
+ L GR L+V +A+ K +LA D + K ND R L+L +EG + + + +S
Sbjct: 426 YTLDGRLLSVAQAVSKDDAGRLAADAGV---KRRANDKRRLFLLEEGQLDTRSAMYKSLS 482
Query: 551 DDDMSKRQMLHEKKMTKLQ-SPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVV------ 603
++ R +++ ++ +P+ H+S TRL + N+P SMT K LK+L +A V
Sbjct: 483 QAEIMMRDKSRQQRKKLVEGNPSLHISLTRLAVRNIPHSMTSKELKQLAREACVGFATDV 542
Query: 604 -------------SRASKQ------------KPVIKQIKFLQSLKKGKVDTKHY---SRG 635
+RA+K+ K +++Q K + G T+ SRG
Sbjct: 543 TNGLRQPLSKEEKARANKEAKEAEHNRKLKGKGIVRQAKIEFESRDGSKVTEAAGGKSRG 602
Query: 636 VAFVEFTEHQHALVALRVLN 655
F+E++ H+ AL+ LR LN
Sbjct: 603 YGFIEYSSHRWALMGLRWLN 622
>gi|312372057|gb|EFR20104.1| hypothetical protein AND_20653 [Anopheles darlingi]
Length = 553
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 141/254 (55%), Gaps = 14/254 (5%)
Query: 414 SLKQTEGEDELQ--NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGF 471
++KQ + +E++ T+F+ NLPFD++ EE+K+ S FG V + ++ KG+ F
Sbjct: 109 AIKQEKKHNEIEEGRTVFVKNLPFDVEVEELKELMSQFGIVEQVLINREPISGHSKGSAF 168
Query: 472 LKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNL 531
+ F+ ++A + S L + + + + +L+AL KK D+E + + + D RNL
Sbjct: 169 VIFRLKDSAQMSCRQS-----LKLQVHDQFIEILEALRKKDIKDREKARLERQAKDSRNL 223
Query: 532 YLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTE 591
YL KEGLI+ G+P+A+ VS DM++R L ++ L++ N VSR RL I+NLP++
Sbjct: 224 YLLKEGLIMAGSPSAKDVSKADMAQRLRLEQRNNEMLKNYNRFVSRERLTIHNLPENFAS 283
Query: 592 KGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVAL 651
L+++ + + + KP + + ++ + + SRG F+ F H+ AL L
Sbjct: 284 NDLRQMVL-----KFTSHKP--NECRVMRDTRPSVGNPSGKSRGYGFISFKRHEEALEVL 336
Query: 652 RVLNNNPSKLFYHH 665
R LNNNPS +H
Sbjct: 337 RKLNNNPSVFGRNH 350
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAE 272
+ ++N+PF +V E+K++ S G+V V I +G SKG AFV F K A+
Sbjct: 125 VFVKNLPFDVEVEELKELMSQFGIVEQVLINREPISGHSKGSAFVIFRLKDSAQ 178
>gi|390344256|ref|XP_783689.3| PREDICTED: RNA-binding protein 28-like [Strongylocentrotus
purpuratus]
Length = 622
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 136/239 (56%), Gaps = 13/239 (5%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T+FI N+P+D +++++ F+ FGE+ V+ +T+ +GT F+KFK E A +
Sbjct: 196 TLFIRNVPYDSTDDDIRDLFAPFGELEFARVVVDPMTEHSRGTAFVKFKRKEDADGCLH- 254
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLA---HDKEIDKSKNETNDHRNLYLAKEGLILEGT 543
G + L GR L + A+ + A + DK+K E D RNL+L +EGLI GT
Sbjct: 255 ----EGDAVRLNGRLLALSPAISRAEAVKLRTADKDKAKEEQKDKRNLHLLREGLIRPGT 310
Query: 544 PAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVV 603
AAEG+S+ ++KR + K KL++ N VS TRL ++NLPK++ K LK+L +A
Sbjct: 311 KAAEGLSEQFINKRLKIENVKKEKLKNLNIFVSPTRLAVHNLPKAVDGKKLKELAREAAG 370
Query: 604 SRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPSKLF 662
+ ++ + + + ++ + S G FVEFT+++HAL AL LNNN ++LF
Sbjct: 371 DKTAR----VIEARIMRDVNNPSAQGVSKSLGFGFVEFTQYEHALAALLKLNNN-AELF 424
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 44/76 (57%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L IRN+P+ + ++I+D+F+P G + + + T S+G AFVKF K DA+ + +
Sbjct: 197 LFIRNVPYDSTDDDIRDLFAPFGELEFARVVVDPMTEHSRGTAFVKFKRKEDADGCLHEG 256
Query: 279 NGQKFGKRPIAVDWAV 294
+ + R +A+ A+
Sbjct: 257 DAVRLNGRLLALSPAI 272
>gi|195430664|ref|XP_002063374.1| GK21872 [Drosophila willistoni]
gi|194159459|gb|EDW74360.1| GK21872 [Drosophila willistoni]
Length = 650
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/267 (35%), Positives = 148/267 (55%), Gaps = 20/267 (7%)
Query: 403 SKLNSSKSKPKSLKQTEGEDELQN--TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLH 460
SKL+ SK K K+ + D++Q T+FI N+PFD ++ ++++ FG V +
Sbjct: 207 SKLDVSKVK----KEKQISDDVQQGCTVFIKNVPFDAEDADLRKVCRKFGIVQYAIINRQ 262
Query: 461 QVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDK-KLAHDKEID 519
Q++ KGT F+KFK E+A + A G L L AL + ++ + ++ +
Sbjct: 263 QISGHSKGTAFVKFKNKESADLCLQA-----GTEFKLMEEVLDPHPALSRDEIKNKQKQE 317
Query: 520 KSKNET-NDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRT 578
+SK+++ D RNLYLA+EGLI+ G+ AA+GV+ DM+KR L + K L++ N VSR
Sbjct: 318 QSKDDSGKDSRNLYLAREGLIMAGSKAADGVTTSDMAKRHELEQVKTQVLKNLNRFVSRN 377
Query: 579 RLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAF 638
RL I+NLP+S + LK++ + R + + V+++ K +GK S+G F
Sbjct: 378 RLSIHNLPQSYDNEKLKQMALTYTGFRPHECR-VMREQKITPEFPQGK------SKGFGF 430
Query: 639 VEFTEHQHALVALRVLNNNPSKLFYHH 665
+ F HQ AL ALR LNNNP H
Sbjct: 431 LSFDTHQRALTALRKLNNNPQIFGTQH 457
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 210 EGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKR 269
E + ++ +LI+RNI +K+ ++ F G + +V I D L G AFV++
Sbjct: 45 ERRQKKRARLIVRNISYKSTDETLRQHFQQWGTLEDVNILKRGDGKLV-GCAFVQYETIN 103
Query: 270 DAESAIQKFNGQKFGKRPIAVDWAVPKNIYSS 301
A AI++ NG++ R + VDWA+ K+ Y++
Sbjct: 104 QATKAIKEANGKEMLGRQVFVDWALGKDEYTT 135
>gi|195120095|ref|XP_002004564.1| GI19540 [Drosophila mojavensis]
gi|193909632|gb|EDW08499.1| GI19540 [Drosophila mojavensis]
Length = 669
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/237 (38%), Positives = 129/237 (54%), Gaps = 15/237 (6%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQ-VTKRPKGTGFLKFKTVEAATAAVS 485
T+FI N+PFD ++ ++++ FG VV + + Q V+ KGT F+KFK E+A +
Sbjct: 241 TVFIKNVPFDAEDADLRKVCRKFG-VVQYAIINRQAVSGHSKGTAFVKFKAKESADLCLQ 299
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
A G L L AL + K+ + SK ET D RNLYLA+EGLI+ + A
Sbjct: 300 A-----GTEFKLMDEVLDPHPALSRDEIKAKKAESSKEETKDSRNLYLAREGLIMANSKA 354
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS DM+KR L + K L++ N VSR RL I+NLP + + LK++ + R
Sbjct: 355 AEGVSASDMAKRHELEQVKTQVLKNLNRFVSRNRLSIHNLPLNYDNEKLKQMALTYTGFR 414
Query: 606 ASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPSKLF 662
+ + V++ K GK S+G F+ F HQ AL ALR LNNNP K+F
Sbjct: 415 PHECR-VMRDHKITPEHPNGK------SKGFGFLSFDTHQRALAALRKLNNNP-KIF 463
>gi|413932762|gb|AFW67313.1| hypothetical protein ZEAMMB73_299493 [Zea mays]
Length = 287
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 76/91 (83%), Gaps = 3/91 (3%)
Query: 568 LQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKV 627
LQSP FHVSRTRL+IYNLPK+MT +KKLC +AV+SRA+KQ PVI+++ L++ KKG
Sbjct: 2 LQSPKFHVSRTRLIIYNLPKTMTINDVKKLCREAVISRATKQNPVIRKVNILKNEKKG-- 59
Query: 628 DTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
+ +SRGVAFV+F EH+HALVALRVLNNNP
Sbjct: 60 -IQKHSRGVAFVDFQEHEHALVALRVLNNNP 89
>gi|225560420|gb|EEH08701.1| RNA recognition domain-containing protein-containing protein
[Ajellomyces capsulatus G186AR]
Length = 740
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 139/512 (27%), Positives = 223/512 (43%), Gaps = 115/512 (22%)
Query: 212 SKTQKWKLIIRNIPFK-AKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRD 270
++ Q KLIIRN+P+ A+ +++ +F G V + IP GF FV +++
Sbjct: 152 TQAQPPKLIIRNLPWSIAEPDQLSSLFRSFGKVKHAVIPKRGTK--HSGFGFVVLRGRKN 209
Query: 271 AESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAE 330
AE A+ NG++ R +AVDWAV K+++ QN D D + G D+
Sbjct: 210 AEKALNAVNGKEVDGRTLAVDWAVEKSVWDE------FQNHTDDVIDGKGKEKEGPDN-- 261
Query: 331 TASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSD 390
D+ +EKED S D ++ ++ + S++D ++G+ E+D+
Sbjct: 262 ----DNKLNEKEDESSTDD-----ELNGRLEDDEGEEDEDDISMTD----LEGD-EEDAG 307
Query: 391 KTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQ-NTIFICNLPFDLDNEEVKQRFSAF 449
K ++E E EDE +T+FI NLPF+ ++ + + F F
Sbjct: 308 KKIDE-----------------------EVEDERNASTVFIRNLPFNATDDSLYEHFVQF 344
Query: 450 GEVVSFVPVLHQVTKRPKGTGFLKF-KTVEAATAAVSASKTTSGL--------------- 493
G + V+ T RP+GT F+ F K +A + A K T L
Sbjct: 345 GPLRYARVVVDAETDRPRGTAFVCFWKNEDAISCLRDAPKRTDLLRSEDSKPKMSTIKHS 404
Query: 494 ----------GIF-LKGRQLTVLKALDKKLAHDKEIDKSKNET---NDHRNLYLAKEGLI 539
G + + GR L + A+ K A E + S D R L+L EG I
Sbjct: 405 VLEDENKDPSGKYTMDGRVLQLSLAVSKSQAAKFEAEGSSRRQARDKDKRRLFLLSEGTI 464
Query: 540 LEGTPAAEGVSDDDMSKRQMLHEKKMTKLQS-PNFHVSRTRLVIYNLPKSMTEKGLKKLC 598
+P + +S +++ R+ +++ ++S P H+S TRL + N+P+++ K LK L
Sbjct: 465 PSNSPLYKQLSPSEIAMRETSAKQRQKLIKSNPMLHISLTRLSVRNIPRNIDSKALKALA 524
Query: 599 IDAVVS-------------------------------RASKQKPVIKQIKFLQSLKKG-K 626
+AVV R +K K +IKQ K + K+G K
Sbjct: 525 REAVVGFAKDVKSGLREPLSKEELHRSTEDMKEADRLRKAKGKGIIKQAKVVFEGKEGSK 584
Query: 627 VDTKH---YSRGVAFVEFTEHQHALVALRVLN 655
VD K SRG F+E+ H+ AL+ LR LN
Sbjct: 585 VDEKSGAGRSRGYGFIEYYSHRSALMGLRWLN 616
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 211 GSKTQKWK----LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFT 266
GS QK K L +R++P A + + FS + + + + T SKG+ FV F
Sbjct: 37 GSSLQKPKSGRTLFVRSLPASATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYGFVTFA 96
Query: 267 CKRDAESAIQKFNGQKFGKRPIAVDWAVPKN--IYSSGGAAAGV 308
DA A+++FNG F R + ++ A P++ I +GG + +
Sbjct: 97 DHEDAAKALEEFNGSDFDGRKLKIEVAEPRHREIDENGGKSVSI 140
>gi|427792459|gb|JAA61681.1| Putative nucleolar protein fibrillarin nop77 rrm superfamily,
partial [Rhipicephalus pulchellus]
Length = 645
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 129/234 (55%), Gaps = 12/234 (5%)
Query: 425 QNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV 484
+NT+FI NL FD E ++ FG + T R +GT F++F + A +
Sbjct: 281 KNTLFIRNLSFDSQQESLETLMKQFGPCRYCLLCTDMDTGRSRGTAFVRFAQDSSVDACL 340
Query: 485 SASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTP 544
A+ S GI L R+L V++AL + +++ + K + D RNLYLA+EGL+ GT
Sbjct: 341 EAA--ASSPGIMLDCRRLDVVRALSRD-ELEEKQKEKKKQKKDRRNLYLAREGLVRPGTE 397
Query: 545 AAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS 604
AA+GVS DM+KR L +K L + ++ VS TRL ++NLP S+ ++ L+ L ++
Sbjct: 398 AAQGVSPQDMTKRAKLQARKRKLLANLHYFVSPTRLSVHNLPPSVDDRKLRALFLENAPH 457
Query: 605 RASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
A I + + +++LK + S G FV FT+H+ AL ALR LNNNP
Sbjct: 458 GAR-----ITEARVMRNLKSPTAE----SYGYGFVTFTKHEDALAALRELNNNP 502
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQK 277
L+++N+P AK ++++++F+ +G V +I + T KG A+V + DAE+A+++
Sbjct: 10 LLVKNLPPDAKESKLEELFAYIGPVKRCFIVRDKTQQSQCKGVAYVTYATTADAEAAVER 69
Query: 278 FN--GQKFGKRPIAVDWAVPK 296
K+G R +AV A PK
Sbjct: 70 SRQGSLKWGDRILAVKAAAPK 90
Score = 39.7 bits (91), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 2 VTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQ 54
+ KK + RGF +VQF + A +A+ N T V GR I V ++ +A+ +Q
Sbjct: 151 IPKKSDGKMRGFAFVQFDETKSAIKAINGLNATEVLGRPIAVDFSLPKATYQQ 203
>gi|195489764|ref|XP_002092875.1| GE11426 [Drosophila yakuba]
gi|194178976|gb|EDW92587.1| GE11426 [Drosophila yakuba]
Length = 655
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/235 (37%), Positives = 131/235 (55%), Gaps = 15/235 (6%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQ-VTKRPKGTGFLKFKTVEAATAAVS 485
T+FI N+PFD ++ ++++ FG +VS+ + Q V+ KGT F+KFK E+A +
Sbjct: 229 TVFIKNVPFDAEDADLRKACRKFG-LVSYAIINRQAVSGHSKGTAFVKFKAKESADLCLQ 287
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEI-DKSKNETNDHRNLYLAKEGLILEGTP 544
A G L L AL ++ K+ D K++ D RNLYLA+EGLI+ G
Sbjct: 288 A-----GTEFKLMDEVLDPHPALSREEMKSKQSQDNKKDDAKDSRNLYLAREGLIMSGAK 342
Query: 545 AAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS 604
AA+GVS DM+KR L + K L++ N VSR RL I+NLP++ + LK++ +
Sbjct: 343 AADGVSASDMAKRHELEQVKTQVLKNLNRFVSRNRLSIHNLPQNYDNEKLKQMALTYTGF 402
Query: 605 RASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPS 659
R + + V+++ K +GK S+G F+ F HQ AL ALR LNNNP+
Sbjct: 403 RPHECR-VMREHKVTPEHPQGK------SKGFGFLSFDTHQRALAALRKLNNNPN 450
>gi|291223437|ref|XP_002731716.1| PREDICTED: hypothetical protein, partial [Saccoglossus kowalevskii]
Length = 391
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/231 (39%), Positives = 132/231 (57%), Gaps = 10/231 (4%)
Query: 432 NLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTS 491
N+PFD E+V + F G+V V+ T+ +G F+KF++ A + +
Sbjct: 1 NIPFDAQEEDVTELFGKHGKVNYCKLVIDPSTEHSRGCAFVKFRSSTEAEKCLEKNSNED 60
Query: 492 GL-GIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDH-RNLYLAKEGLILEGTPAAEGV 549
G+ G L GR+L + AL K+ A + DK + + RNLYLA+EG+I GT AAEGV
Sbjct: 61 GVNGFMLNGRKLHLSMALSKEEAEKLKKDKKEPKEKKDKRNLYLAREGMIRPGTKAAEGV 120
Query: 550 SDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQ 609
S DM KR + + K KLQ+ N VS TRL ++NLP S+ K L++L A A
Sbjct: 121 SKGDMMKRFKMEKVKRQKLQNLNIFVSPTRLSVHNLPTSVDNKKLRELFWKA----AGDD 176
Query: 610 KPVIKQIKFLQSLKKGKVDTKHY--SRGVAFVEFTEHQHALVALRVLNNNP 658
K I + + ++ + G+V+++ S G AF+EFTEH+HAL ALR +NNNP
Sbjct: 177 KAKIIEARVMRDM--GRVNSRGVPKSLGYAFIEFTEHEHALKALRHVNNNP 225
>gi|224077878|ref|XP_002305448.1| predicted protein [Populus trichocarpa]
gi|222848412|gb|EEE85959.1| predicted protein [Populus trichocarpa]
Length = 179
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/124 (58%), Positives = 87/124 (70%), Gaps = 16/124 (12%)
Query: 538 LILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKL 597
++++GTPAAEG+ DM KR L E+KMTKLQSPNFH V+YNLPKSMTEK LKK+
Sbjct: 70 MVIKGTPAAEGILTSDMVKRNKLQEEKMTKLQSPNFH------VVYNLPKSMTEKQLKKV 123
Query: 598 CIDAVVSRASKQKPVIKQIKFLQSLKKGK-VDTKHYSRGVAFVEFTEHQHALVALRVLNN 656
IDAV SRA++QKPV +Q K+GK D +S GVAFVE T HQH LVA RV NN
Sbjct: 124 FIDAVTSRATEQKPVTQQ------YKEGKGCD---HSWGVAFVELTVHQHVLVAPRVPNN 174
Query: 657 NPSK 660
+K
Sbjct: 175 PATK 178
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/30 (76%), Positives = 26/30 (86%)
Query: 274 AIQKFNGQKFGKRPIAVDWAVPKNIYSSGG 303
AIQKF+G+KFGKRP AVD AVPK IYS+G
Sbjct: 2 AIQKFDGKKFGKRPTAVDRAVPKKIYSTGA 31
>gi|453088735|gb|EMF16775.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 761
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 135/513 (26%), Positives = 228/513 (44%), Gaps = 113/513 (22%)
Query: 215 QKWKLIIRNIPFKAK-VNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAES 273
Q KLI+RN+P+ K +++ +F G + Y+P GL GF FV +++AE
Sbjct: 160 QPSKLIVRNLPWSIKGPKQLEKLFQSYGKIKKAYVPQKG-PGLMAGFGFVIMRGRKNAEK 218
Query: 274 AIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETAS 333
AI+ NG++ R +AVDWAV K+++ + ++D G++ +DAE
Sbjct: 219 AIEGVNGKEINGRTLAVDWAVEKDVFEE-----------NADADEGNE----AEDAEHMG 263
Query: 334 DDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTV 393
+D +++D + E + N GS S+DS ++G+ + D +
Sbjct: 264 EDLTGEDEDDDIEAEGEEGEEEEDAYEEN------GSADDASEDSDTLEGDDDDDGEGDW 317
Query: 394 NESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSA-FGEV 452
N+ +Q E D+ T+FI NLPF +E+++ F FG
Sbjct: 318 ND--------------------RQHENADDKPTTLFIRNLPFTCTDEDLEDHFREHFGST 357
Query: 453 VSFVPVLHQVTKRPKGTGFLKF-----------------------KTVEA----ATAAVS 485
V+ T R KGTGF+ F K+ EA A+ ++
Sbjct: 358 RYARVVMDHGTGRSKGTGFVCFYDKADADGCLRGAPLKPVTTAQEKSKEAKPTQASHSIL 417
Query: 486 ASKTTSGLGIF-LKGRQLTVLKALDK----KLAHDKEIDKSKNETNDHRNLYLAKEGLIL 540
++ G + + GR L + +A+DK +LA + + K + D R LYL EG I
Sbjct: 418 QNEMADATGQYTMDGRVLQISRAVDKSDANRLAEESASQRHKRD-GDKRRLYLLGEGTIA 476
Query: 541 EGTPAAEGVSDDDMSKRQM-LHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCI 599
+ E ++ + + R+ ++K +P+ H+S TRL + N+P+S+T K LK+L
Sbjct: 477 SNSKVWEQLAPSEQAMREASAKQRKQLIENNPSLHLSLTRLSVRNIPRSVTSKDLKELAR 536
Query: 600 DAVV-----------SRASKQ--------------------KPVIKQIKFL-QSLKKGKV 627
AVV +R SK+ K +++Q K + +S KV
Sbjct: 537 QAVVGFATDVKEGRRARLSKEELLRGGEEMQAAEAARKKSGKGIVRQAKVVFESAGGSKV 596
Query: 628 DTKH---YSRGVAFVEFTEHQHALVALRVLNNN 657
+ + SRG F+E+ H++AL+ LR LN +
Sbjct: 597 NEESGAGRSRGYGFIEYYTHRNALMGLRWLNGH 629
Score = 45.4 bits (106), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +R++P +++ ++FS V + + +T L KG+ FV F DA A +F
Sbjct: 54 LFVRSLPASTTNDQLTELFSDAFPVKHATAVIDPETKLCKGYGFVTFADAEDAAQAKAQF 113
Query: 279 NGQKFGKRPIAVDWAVPKN 297
NG + G + + ++ A P++
Sbjct: 114 NGHELGGKKLRIEVAEPRS 132
>gi|302498318|ref|XP_003011157.1| hypothetical protein ARB_02679 [Arthroderma benhamiae CBS 112371]
gi|291174705|gb|EFE30517.1| hypothetical protein ARB_02679 [Arthroderma benhamiae CBS 112371]
Length = 803
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 133/506 (26%), Positives = 219/506 (43%), Gaps = 116/506 (22%)
Query: 218 KLIIRNIPFK-AKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
KLIIRN+P+ + ++ +F G + + +P GF FV +++AE AI+
Sbjct: 209 KLIIRNLPWSITEPQHLELLFRSYGKIKHAVVPKKGSR--VAGFGFVVMRGRKNAERAIE 266
Query: 277 KFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDDS 336
NG++ R +AVDWAV K+ + + AA + DG ++G D E +++
Sbjct: 267 GVNGKEVDGRTLAVDWAVEKDEWENMNKAA---EESDGKQEAG-------DSEEAVAENE 316
Query: 337 NSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTVNES 396
+ +D S+A ++E +D + GN+++D D ++ ++
Sbjct: 317 HLDVVDDGESDAISEDE----------------------EDGGVELGNEDEDEDISMGDA 354
Query: 397 AKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFV 456
+ ++ +TIFI NLPF +E + + FS FG V
Sbjct: 355 EDDEQEEEEEDDRN--------------ASTIFIRNLPFSATDETLHEHFSKFGPVRYAR 400
Query: 457 PVLHQVTKRPKGTGFLKFKTVEAATAAV---------SASK------TTSGLGIFLK--- 498
VL T+RPKGT F+ F E A++ + S SK T L L+
Sbjct: 401 VVLDPATERPKGTAFVCFYKAEDASSCIREAPRDVDPSRSKDPRHKAATRQLHSVLEDES 460
Query: 499 ----------GRQLTVLKALDKKLAHD-KEIDKSKNETNDH--RNLYLAKEGLILEGTPA 545
GR L V +A+ + A +E ++ E DH R L+L EG I +P
Sbjct: 461 NDPTGKYTMDGRVLQVSQAVSRTEAGRLEEEGHTRREARDHDKRRLFLLSEGTIPSNSPL 520
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQS-PNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS 604
+S+ + R+ +++ ++S P HVS TRL + NLP+ + K LK L +AVV
Sbjct: 521 YAKLSETERRMREASAKQRQKLVKSNPMLHVSLTRLSVRNLPRHIDSKALKALAREAVVG 580
Query: 605 -------------------------------RASKQKPVIKQIKFLQSLKKG-KVDTKH- 631
R +++K ++KQ K + K G K+ K
Sbjct: 581 FAKDVKNGLRKPISWEESRRSAALMKEADHLRKAQKKGIVKQAKVVFEGKDGSKMSEKSG 640
Query: 632 --YSRGVAFVEFTEHQHALVALRVLN 655
SRG F+E+ H+++L+ LR LN
Sbjct: 641 AGRSRGYGFIEYATHRNSLMGLRWLN 666
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +R++P A + + FS + + + + T SKG+ FV FT DA+SA ++
Sbjct: 97 LFVRSLPTTATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYGFVTFTDHEDAQSAAREL 156
Query: 279 NGQKFGKRPIAVDWAVPKN 297
N F + I ++ A P++
Sbjct: 157 NNSVFEGKKIKIELAEPRH 175
>gi|195586507|ref|XP_002083015.1| GD24928 [Drosophila simulans]
gi|194195024|gb|EDX08600.1| GD24928 [Drosophila simulans]
Length = 652
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 132/235 (56%), Gaps = 15/235 (6%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQ-VTKRPKGTGFLKFKTVEAATAAVS 485
T+FI N+PFD ++ ++++ FG +VS+ + Q V+ KGT F+KFK E+A +
Sbjct: 226 TVFIKNVPFDAEDADLRKACRKFG-LVSYAIINRQAVSGHSKGTAFVKFKAKESADLCLQ 284
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSK-NETNDHRNLYLAKEGLILEGTP 544
A G L L AL ++ K+ ++K ++ D RNLYLA+EGLI+ G
Sbjct: 285 A-----GTEFKLMDEVLDPHPALSREEMKSKQSQENKKDDAKDSRNLYLAREGLIMAGAK 339
Query: 545 AAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS 604
AA+GVS DM+KR L + K L++ N VSR RL I+NLP++ + LK++ +
Sbjct: 340 AADGVSASDMAKRHELEQVKTQVLKNLNRFVSRNRLSIHNLPQNYDNEKLKQMALTYTGF 399
Query: 605 RASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPS 659
R + + V+++ K +GK S+G F+ F HQ AL ALR LNNNP+
Sbjct: 400 RPHECR-VMREHKVTPEHPQGK------SKGFGFLSFDTHQRALAALRKLNNNPN 447
>gi|24762707|ref|NP_611955.2| CG4806 [Drosophila melanogaster]
gi|21626772|gb|AAF47253.2| CG4806 [Drosophila melanogaster]
gi|73853366|gb|AAZ86754.1| LD27920p [Drosophila melanogaster]
Length = 657
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 132/235 (56%), Gaps = 15/235 (6%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQ-VTKRPKGTGFLKFKTVEAATAAVS 485
T+FI N+PFD ++ ++++ FG +VS+ + Q V+ KGT F+KFK E+A +
Sbjct: 231 TVFIKNVPFDAEDADLRKACRKFG-LVSYAIINRQAVSGHSKGTAFVKFKAKESADLCLQ 289
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSK-NETNDHRNLYLAKEGLILEGTP 544
A G L L AL ++ K+ ++K ++ D RNLYLA+EGLI+ G
Sbjct: 290 A-----GTEFKLMDEVLDPHPALSREEMKSKQSQENKKDDAKDSRNLYLAREGLIMAGAK 344
Query: 545 AAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS 604
AA+GVS DM+KR L + K L++ N VSR RL I+NLP++ + LK++ +
Sbjct: 345 AADGVSASDMAKRHELEQVKTQVLKNLNRFVSRNRLSIHNLPQNYDNEKLKQMALTYTGF 404
Query: 605 RASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPS 659
R + + V+++ K +GK S+G F+ F HQ AL ALR LNNNP+
Sbjct: 405 RPHECR-VMREHKVTPEHPQGK------SKGFGFLSFDTHQRALAALRKLNNNPN 452
>gi|195353236|ref|XP_002043111.1| GM11803 [Drosophila sechellia]
gi|194127199|gb|EDW49242.1| GM11803 [Drosophila sechellia]
Length = 652
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 132/235 (56%), Gaps = 15/235 (6%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQ-VTKRPKGTGFLKFKTVEAATAAVS 485
T+FI N+PFD ++ ++++ FG +VS+ + Q V+ KGT F+KFK E+A +
Sbjct: 226 TVFIKNVPFDAEDADLRKACRKFG-LVSYAIINRQAVSGHSKGTAFVKFKAKESADLCLQ 284
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSK-NETNDHRNLYLAKEGLILEGTP 544
A G L L AL ++ K+ ++K ++ D RNLYLA+EGLI+ G
Sbjct: 285 A-----GTEFKLMDEVLDPHPALSREEMKSKQSQENKKDDAKDSRNLYLAREGLIMAGAK 339
Query: 545 AAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS 604
AA+GVS DM+KR L + K L++ N VSR RL I+NLP++ + LK++ +
Sbjct: 340 AADGVSASDMAKRHELEQVKTQVLKNLNRFVSRNRLSIHNLPQNYDNEKLKQMALTYTGF 399
Query: 605 RASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPS 659
R + + V+++ K +GK S+G F+ F HQ AL ALR LNNNP+
Sbjct: 400 RPHECR-VMREHKVTPEHPQGK------SKGFGFLSFDTHQRALAALRKLNNNPN 447
>gi|202028117|gb|ACH95270.1| FI03862p [Drosophila melanogaster]
Length = 660
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 132/235 (56%), Gaps = 15/235 (6%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQ-VTKRPKGTGFLKFKTVEAATAAVS 485
T+FI N+PFD ++ ++++ FG +VS+ + Q V+ KGT F+KFK E+A +
Sbjct: 234 TVFIKNVPFDAEDADLRKACRKFG-LVSYAIINRQAVSGHSKGTAFVKFKAKESADLCLQ 292
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSK-NETNDHRNLYLAKEGLILEGTP 544
A G L L AL ++ K+ ++K ++ D RNLYLA+EGLI+ G
Sbjct: 293 A-----GTEFKLMDEVLDPHPALSREEMKSKQSQENKKDDAKDSRNLYLAREGLIMAGAK 347
Query: 545 AAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS 604
AA+GVS DM+KR L + K L++ N VSR RL I+NLP++ + LK++ +
Sbjct: 348 AADGVSASDMAKRHELEQVKTQVLKNLNRFVSRNRLSIHNLPQNYDNEKLKQMALTYTGF 407
Query: 605 RASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPS 659
R + + V+++ K +GK S+G F+ F HQ AL ALR LNNNP+
Sbjct: 408 RPHECR-VMREHKVTPEHPQGK------SKGFGFLSFDTHQRALAALRKLNNNPN 455
>gi|196015807|ref|XP_002117759.1| hypothetical protein TRIADDRAFT_61835 [Trichoplax adhaerens]
gi|190579644|gb|EDV19735.1| hypothetical protein TRIADDRAFT_61835 [Trichoplax adhaerens]
Length = 741
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 151/278 (54%), Gaps = 15/278 (5%)
Query: 388 DSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGE--DELQN--TIFICNLPFDLDNEEVK 443
DSD T ++ V+ N++++ + K+ E +++Q T+FI NL FD +E+K
Sbjct: 304 DSDLTDSDCEAVAKTDSANTTENAEEETKRNRHEIKEDVQEGKTLFIRNLSFDCKEDELK 363
Query: 444 QRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIF-LKGRQL 502
+ FS FG++ V+ + +G F+K+ VE +A +G F L R+L
Sbjct: 364 EFFSKFGKIRYCKIVIDRANDYSRGVAFVKY--VEKGSADKCLESYNNGDYDFTLHDRKL 421
Query: 503 TVLKALDKKLAHDKEIDK-SKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLH 561
+ +A+ + A + + K SK++ D RNLYLA EG+I + AA G+S D+ KR M
Sbjct: 422 IICRAVSRTDACNFSVTKPSKDQ--DKRNLYLASEGVITADSAAAGGLSKSDLKKRAMTE 479
Query: 562 EKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPV-IKQIKFLQ 620
K KL++PN+ VS+TRL I N+P +++ LKK+ I +V +++PV IK++ ++
Sbjct: 480 MKNKAKLKNPNYFVSKTRLCIRNIPIQVSDADLKKVIISSV----DEKRPVRIKKVTIMR 535
Query: 621 SLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
+ SRG F+E H AL LR +NNNP
Sbjct: 536 DRNRINSHGIAKSRGFGFMELLNHDDALKILRAINNNP 573
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 147/347 (42%), Gaps = 73/347 (21%)
Query: 1 MVTKKGS-NEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKV 59
+V KG+ +E RGFGYV F + EDA RA +K S+ GR I + A + +R +
Sbjct: 45 LVRDKGTKDECRGFGYVTFTLQEDAERATTLK--KSIRGRHIQILLAQRKFDTNTKRKQN 102
Query: 60 TQEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATL-GIDLADK-EDCSQK 117
E+ E+ +S LE+ K R + L + L + +
Sbjct: 103 HDEI-------------------EEVNSSHLEAPVIKKSRSYSQLDNVQLENTISSIVSR 143
Query: 118 QRVARTVIIGGLLNADMAEE--VHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDAS 175
RT++I L + D++ + RL + + + YPLP +L Q K+D +
Sbjct: 144 ANSGRTILIQNL-SPDISRKRLYKRLRKKVD-IEELKYPLPGSQLN----VQIVSKIDKT 197
Query: 176 AVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKD 235
K K+I+RN+ F + ++K+
Sbjct: 198 Q---------------------------------SKKSLNKAKIIVRNLCFNCRERDLKE 224
Query: 236 MFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVP 295
+FS G V V IP GFAF++F A +AI++ N + R I++DWA+P
Sbjct: 225 IFSQFGNVITVNIPP------KGGFAFIQFENVFHAANAIKELNMTEVMNRRISLDWALP 278
Query: 296 KNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETA--SDDSNSSE 340
K++Y A +++G+ + D DL D D E +D +N++E
Sbjct: 279 KSLYLKNTAENSKEHEGEKVTSDNCDSDLTDSDCEAVAKTDSANTTE 325
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L IRN+ F K +E+K+ FS G + I + S+G AFVK+ K A+ ++ +
Sbjct: 348 LFIRNLSFDCKEDELKEFFSKFGKIRYCKIVIDRANDYSRGVAFVKYVEKGSADKCLESY 407
Query: 279 NG 280
N
Sbjct: 408 NN 409
Score = 38.9 bits (89), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 8/84 (9%)
Query: 425 QNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTK-RPKGTGFLKFKTVEAATAA 483
++TIF+ NLP+D+ + +Q F G + S V + TK +G G++ F E A A
Sbjct: 13 RSTIFVRNLPYDITETQFEQLFDDVGPIRSSFLVRDKGTKDECRGFGYVTFTLQEDAERA 72
Query: 484 VSASKTTSGLGIFLKGRQLTVLKA 507
+ K+ ++GR + +L A
Sbjct: 73 TTLKKS-------IRGRHIQILLA 89
>gi|194886641|ref|XP_001976654.1| GG19902 [Drosophila erecta]
gi|190659841|gb|EDV57054.1| GG19902 [Drosophila erecta]
Length = 655
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 132/235 (56%), Gaps = 15/235 (6%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQ-VTKRPKGTGFLKFKTVEAATAAVS 485
T+FI N+PFD ++ ++++ FG +VS+ + Q V+ KGT F+KFK E+A +
Sbjct: 229 TVFIKNVPFDAEDTDLRKACRKFG-LVSYAIINRQAVSGHSKGTAFVKFKAKESADLCLQ 287
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSK-NETNDHRNLYLAKEGLILEGTP 544
A G L L AL ++ K+ ++K ++ D RNLYLA+EGLI+ G
Sbjct: 288 A-----GTEFKLMDEVLDPHPALSREEMKSKQSQENKKDDAKDSRNLYLAREGLIMSGAK 342
Query: 545 AAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS 604
AA+GVS DM+KR L + K L++ N VSR RL I+NLP++ + LK++ +
Sbjct: 343 AADGVSASDMAKRHELEQVKTQVLKNLNRFVSRNRLSIHNLPQNYDNEKLKQMALTYTGF 402
Query: 605 RASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPS 659
R + + V+++ K +GK S+G F+ F HQ AL ALR LNNNP+
Sbjct: 403 RPHECR-VMREHKVTPEHPQGK------SKGFGFLSFDTHQRALAALRKLNNNPN 450
>gi|167522944|ref|XP_001745809.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775610|gb|EDQ89233.1| predicted protein [Monosiga brevicollis MX1]
Length = 1128
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 131/236 (55%), Gaps = 12/236 (5%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T+FI NL +D+++ +++ FG++ V V + T R +GTGF+KFK A + +
Sbjct: 511 TLFIRNLAYDMEDYQLQASLGVFGDLEYAVLVRDRETGRARGTGFVKFKNKADADSCLQR 570
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETN-DHRNLYLAKEGLILEGTPA 545
+ T+ + GR ++V AL + A + ++ + D RNLYL++EG I T A
Sbjct: 571 MEDTTLPPFEVSGRPISVSLALSRNQATEVSTERREQANKADKRNLYLSREGFIPTDTQA 630
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
+S DD KR+ L + K+++PN VS+TRL ++NLPK + + LK + A
Sbjct: 631 WVDMSSDDQRKRRNLEIENKAKMKNPNMFVSKTRLSVHNLPKMLKDAQLKAIFRGA---- 686
Query: 606 ASKQKPVIKQIKFLQSLKKGKVDTKHYSR--GVAFVEFTEHQHALVALRVLNNNPS 659
+ IKQ+K ++ + +VD + R G FVEF +H+ A+ ALR +NNNP+
Sbjct: 687 ---GEGAIKQVKVVRD--RARVDREGNPRSLGYGFVEFKDHESAVQALRTINNNPT 737
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 25/135 (18%)
Query: 209 GEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCK 268
G+G+KT L +RN+ F +++D+FS + V ++ +++ TG S+GF +V+F
Sbjct: 18 GDGAKT---TLFVRNLAFSVTSQDLEDLFSDIAPVKQCFVVNDSQTGQSRGFGYVRFALH 74
Query: 269 RDAESAIQKFNGQKFGKRPIAVDWA-------VPKNIYSSGGAAAGVQNKGDGNSDSGSD 321
DA A+ KF R + +DWA V + S AAA V
Sbjct: 75 DDAAEALNKFQNSPCQGRNLKLDWAERRQPETVRRPERKSHQAAAPVDE----------- 123
Query: 322 DDLGDDDAETASDDS 336
DDDA+ A++D+
Sbjct: 124 ----DDDAQEAAEDA 134
>gi|170056280|ref|XP_001863959.1| RNA-binding protein 28 [Culex quinquefasciatus]
gi|167876028|gb|EDS39411.1| RNA-binding protein 28 [Culex quinquefasciatus]
Length = 663
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/251 (33%), Positives = 136/251 (54%), Gaps = 14/251 (5%)
Query: 411 KPKSLKQTEGEDELQ--NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKG 468
KP + + + E++ T+F+ N+P+D D +K S FG V + +++ PKG
Sbjct: 221 KPPVVARQKNHTEIEEGRTVFLKNVPYDADESSLKDVMSQFGIVERVLINKERISGHPKG 280
Query: 469 TGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDH 528
T F+ FK ++A + S F++ +++AL KK DKE K++ D
Sbjct: 281 TAFVIFKLKDSADMSRKQSYKLQVNNQFIE-----IVEALKKKDIKDKENQKNERHGKDS 335
Query: 529 RNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKS 588
RNLYL KEGLI+ G+PAA+ VS DM++R L +K L++ + V+R RL I+NLP+
Sbjct: 336 RNLYLLKEGLIMAGSPAAKDVSKTDMAQRLRLEQKCSQMLKNLSRFVARERLTIHNLPEQ 395
Query: 589 MTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHAL 648
T L+K+ V + + Q P ++ + ++ + + SRG F+ F +H+ AL
Sbjct: 396 YTSNDLRKM-----VQKFTNQNP--QECRVMRENRPSFGNPSGKSRGYGFLSFKKHEIAL 448
Query: 649 VALRVLNNNPS 659
LR LNNNPS
Sbjct: 449 EVLRKLNNNPS 459
>gi|194754830|ref|XP_001959697.1| GF11912 [Drosophila ananassae]
gi|190620995|gb|EDV36519.1| GF11912 [Drosophila ananassae]
Length = 664
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 90/239 (37%), Positives = 133/239 (55%), Gaps = 17/239 (7%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQ-VTKRPKGTGFLKFKTVEAATAAVS 485
T+FI N+PFD ++ ++++ FG VVS+ + Q V+ KGT F+KF+ E+A +
Sbjct: 237 TVFIKNVPFDAEDADLRKVCRKFG-VVSYAIINRQAVSGHSKGTAFVKFRAKESADLCLQ 295
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETN--DHRNLYLAKEGLILEGT 543
A G L L AL + K+ ++ K E + D RNLYLA+EGLI+ G+
Sbjct: 296 A-----GTEFKLMDEVLDPHPALSRDEMKTKQSEQEKKEDSGKDSRNLYLAREGLIMSGS 350
Query: 544 PAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVV 603
AA+GVS DM+KR L + K L++ N VSR RL I+NLP++ + LK++
Sbjct: 351 KAADGVSASDMAKRHELEQVKTQVLKNLNRFVSRNRLSIHNLPQNYDNEKLKQMAQTYTG 410
Query: 604 SRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPSKLF 662
R + + V+++ K +GK S+G F+ F HQ AL ALR LNNNP K+F
Sbjct: 411 FRPHECR-VMREQKVTPEHPQGK------SKGFGFLSFDTHQRALAALRKLNNNP-KIF 461
>gi|198455851|ref|XP_001360130.2| GA18446 [Drosophila pseudoobscura pseudoobscura]
gi|198135422|gb|EAL24704.2| GA18446 [Drosophila pseudoobscura pseudoobscura]
Length = 658
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 127/241 (52%), Gaps = 14/241 (5%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T+FI N+PFD D+ ++++ FG V + V+ +GT F+KFK E+A + A
Sbjct: 229 TVFIKNVPFDADDADLRKVCRKFGLVNYAIINREAVSGHSRGTAFVKFKAKESADLCLQA 288
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETN--DHRNLYLAKEGLILEGTP 544
G L L AL + K+ +SK++ D RNLYLA+EGLI+ G+
Sbjct: 289 -----GTEFTLMDEVLDPHPALSRDELKSKQSRESKDDDTGKDSRNLYLAREGLIMSGSK 343
Query: 545 AAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS 604
AA+GV+ DM+KR L + K L++ N VSR RL I+NLP + ++ LK++
Sbjct: 344 AADGVTASDMTKRHELEQMKTQVLKNLNRFVSRNRLSIHNLPYNYDDEKLKQMAQTYTGF 403
Query: 605 RASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPSKLFYH 664
R + + V+++ K GK S+G F+ F HQ AL ALR LNNNP+
Sbjct: 404 RPHECR-VMREHKITPEHPHGK------SKGFGFISFETHQRALAALRKLNNNPNIFGAQ 456
Query: 665 H 665
H
Sbjct: 457 H 457
>gi|195149075|ref|XP_002015483.1| GL11105 [Drosophila persimilis]
gi|194109330|gb|EDW31373.1| GL11105 [Drosophila persimilis]
Length = 658
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 127/241 (52%), Gaps = 14/241 (5%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T+FI N+PFD D+ ++++ FG V + V+ +GT F+KFK E+A + A
Sbjct: 229 TVFIKNVPFDADDADLRKVCRKFGLVNYAIINREAVSGHSRGTAFVKFKAKESADLCLQA 288
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETN--DHRNLYLAKEGLILEGTP 544
G L L AL + K+ +SK++ D RNLYLA+EGLI+ G+
Sbjct: 289 -----GTEFTLMDEVLDPHPALSRDELKSKQSRESKDDDTGKDSRNLYLAREGLIMSGSK 343
Query: 545 AAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS 604
AA+GV+ DM+KR L + K L++ N VSR RL I+NLP + ++ LK++
Sbjct: 344 AADGVTASDMTKRHELEQMKTQVLKNLNRFVSRNRLSIHNLPYNYDDEKLKQMAQTYTGF 403
Query: 605 RASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPSKLFYH 664
R + + V+++ K GK S+G F+ F HQ AL ALR LNNNP+
Sbjct: 404 RPHECR-VMREHKITPEHPHGK------SKGFGFISFETHQRALAALRKLNNNPNIFGAQ 456
Query: 665 H 665
H
Sbjct: 457 H 457
>gi|402585539|gb|EJW79479.1| hypothetical protein WUBG_09612, partial [Wuchereria bancrofti]
Length = 406
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 157/315 (49%), Gaps = 26/315 (8%)
Query: 355 DIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTVNESAKVSDVSKLNSSKSKPKS 414
+I +++ ++ S GS+ S+++ KE D + E +S K + KS
Sbjct: 30 EIKKEIKQEVESNDGSISSITE--------KEGRDDSEIKEEVMSEGLSDEGIYKIEKKS 81
Query: 415 LKQTEGEDELQ------NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKG 468
KQ E + +FI NL ++ ++E+++ S FG + V + ++ PKG
Sbjct: 82 EKQAAQEFKEDKAVLEGRVVFIRNLSYETTDKELREALSKFGNISLAVLCYYAGSEHPKG 141
Query: 469 TGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNET--- 525
T F+ F++ + A +SA GI + GR++ +AL + A +I+K E
Sbjct: 142 TAFVHFESADGAEKCLSA--IDQAPGILIGGRRIFGHQALPRSEA--AKIEKVFREIIKK 197
Query: 526 -NDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYN 584
D RNL+L + G I GT AA G+S+ D KR + KL++ + VS TRLV++N
Sbjct: 198 PKDKRNLFLLRAGFIRPGTTAAAGMSEADAEKRARMAIVARKKLKNLHMFVSPTRLVVHN 257
Query: 585 LPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEH 644
LPKS+T+K + +C A + +K I + + + K + SRG FV F H
Sbjct: 258 LPKSLTDKAFRSMCFIAAGNPDAK----ITECRIWRDRNKLGTSGEAISRGFGFVNFLSH 313
Query: 645 QHALVALRVLNNNPS 659
Q AL A++ LNNNP+
Sbjct: 314 QDALSAMKHLNNNPN 328
>gi|325088692|gb|EGC42002.1| ribosome biogenesis [Ajellomyces capsulatus H88]
Length = 699
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 137/512 (26%), Positives = 220/512 (42%), Gaps = 115/512 (22%)
Query: 212 SKTQKWKLIIRNIPFK-AKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRD 270
++ Q KLIIRN+P+ A+ +++ +F G V + IP GF FV ++
Sbjct: 110 TQVQPPKLIIRNLPWSIAEPDQLSSLFRSFGKVKHAVIPKRGTK--HSGFGFVVLRGWKN 167
Query: 271 AESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAE 330
AE A+ NG++ R +AVDWAV K+++ QN D D + G D+
Sbjct: 168 AEKALNAVNGKEVDGRTLAVDWAVEKSVWDE------FQNHTDDVIDGKGKEKEGPDN-- 219
Query: 331 TASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSD 390
D+ +EKED S D ++ ++ + S+SD ++G+ E+D+
Sbjct: 220 ----DNKLNEKEDESSTDD-----ELNGRLEDDEGEEDEDDISMSD----LEGD-EEDAG 265
Query: 391 KTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQ-NTIFICNLPFDLDNEEVKQRFSAF 449
K ++E E EDE +T+FI NLPF+ ++ + + F F
Sbjct: 266 KKIDE-----------------------EVEDERNASTVFIRNLPFNATDDSLYEHFVQF 302
Query: 450 GEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGL---------------- 493
G + V+ T RP+GT F+ F E A + + S + L
Sbjct: 303 GPLRYARVVVDAETDRPRGTAFVCFWKNEDAISCLRDSPKRTDLLRSEDSKPKMSTIKHS 362
Query: 494 ----------GIF-LKGRQLTVLKALDKKLAHDKEIDKSKNET---NDHRNLYLAKEGLI 539
G + + GR L + A+ K A E + S D R L+L EG I
Sbjct: 363 VLEDENKDPSGKYTMDGRVLQLSLAVSKSQAAKFEAEGSSRRQARDKDKRRLFLLSEGTI 422
Query: 540 LEGTPAAEGVSDDDMSKRQMLHEKKMTKLQS-PNFHVSRTRLVIYNLPKSMTEKGLKKLC 598
+ + +S +++ R+ +++ ++S P H+S TRL + N+P+++ K LK L
Sbjct: 423 PSNSSLYKQLSPSEIAMRETSAKQRQKLIKSNPMLHISLTRLSVRNIPRNIDSKALKALA 482
Query: 599 IDAVVS-------------------------------RASKQKPVIKQIKFLQSLKKG-K 626
+AVV R +K K +IKQ K + K+G K
Sbjct: 483 REAVVGFAKDVKSGLREPLSKEELHRSTEDMKEADRLRKAKGKGIIKQAKVVFEGKEGSK 542
Query: 627 VDTKH---YSRGVAFVEFTEHQHALVALRVLN 655
VD K SRG F+E+ H+ AL+ LR LN
Sbjct: 543 VDEKSGAGRSRGYGFIEYYSHRSALMGLRWLN 574
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 254 TGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKN--IYSSGGAAAGV 308
T SKG+ FV F DA A+++FNG F R + ++ A P++ I +GG + +
Sbjct: 42 TKQSKGYGFVTFADHEDAAKALEEFNGSDFDGRKLKIEVAEPRHREIDENGGKSVSI 98
>gi|195380111|ref|XP_002048814.1| GJ21111 [Drosophila virilis]
gi|194143611|gb|EDW60007.1| GJ21111 [Drosophila virilis]
Length = 670
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/241 (37%), Positives = 128/241 (53%), Gaps = 15/241 (6%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQ-VTKRPKGTGFLKFKTVEAATAAVS 485
T+FI N+PFD ++ ++++ FG VV + + Q V+ KGT F+KFK E+A +
Sbjct: 242 TVFIKNVPFDAEDGDLRKVCRKFG-VVQYAIINRQAVSGHSKGTAFVKFKAKESADLCLQ 300
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETN-DHRNLYLAKEGLILEGTP 544
A G L L AL + K+ SK+ET D R LYLA+EGLI+ +
Sbjct: 301 A-----GTEFKLMDEVLDPHPALSRDEIKTKQTQNSKDETTKDSRYLYLAREGLIMANSK 355
Query: 545 AAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS 604
AA+GVS DM+KR L + K L++ N VSR RL I+NLP + + LK++ +
Sbjct: 356 AADGVSASDMAKRHELEQVKTQVLKNLNRFVSRNRLSIHNLPLNYDNEKLKQMALTYTGF 415
Query: 605 RASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPSKLFYH 664
R + + V++ K +GK S+G F+ F HQ AL ALR LNNNPS
Sbjct: 416 RPHECR-VMRDQKVTPEHPQGK------SKGFGFLSFDTHQRALAALRKLNNNPSIFGTQ 468
Query: 665 H 665
H
Sbjct: 469 H 469
>gi|289741785|gb|ADD19640.1| nucleolar protein fibrillarin NOP77 [Glossina morsitans morsitans]
Length = 627
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 124/241 (51%), Gaps = 15/241 (6%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T+FI NLPFD ++ ++++ G V + H ++ KGT F+KFK+ E+A + A
Sbjct: 205 TVFIKNLPFDAEDADLRKVCRKCGPVSYAIINRHPISGHSKGTAFVKFKSKESADLCLQA 264
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKK--LAHDKEIDKSKNETNDHRNLYLAKEGLILEGTP 544
G + L L AL K+ H E K K + D RNLYL +EGLI+ G+
Sbjct: 265 -----GSELTLMDEILQSYPALSKEQICEHTNENKKGK-QGKDSRNLYLTREGLIMAGSK 318
Query: 545 AAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS 604
AAEGVS DM+KR L + K L+ N VSR RL I+NLP + + L+ + I
Sbjct: 319 AAEGVSASDMNKRHKLEQLKAQVLKKLNRFVSRNRLSIHNLPLNYNDDKLRDM-IAIYTG 377
Query: 605 RASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPSKLFYH 664
+ V++ + KGK S+G F+ F HQ AL+ALR LNNNP+
Sbjct: 378 FKPHECRVMRDNNITRDHPKGK------SKGFGFMSFKTHQEALLALRKLNNNPNIFSQQ 431
Query: 665 H 665
H
Sbjct: 432 H 432
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 210 EGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKR 269
E + ++ +LI+RNI +KA +++ F G + + + D L G AF+++
Sbjct: 34 ERRQKKRARLIVRNINYKAAEQDLRTYFGQWGEIEEINLLKRADGKLV-GCAFIQYATIN 92
Query: 270 DAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSG 302
A AI K N ++ RP+ VDWA+ KN Y +G
Sbjct: 93 QATKAILKGNSKELLGRPVFVDWALGKNEYVAG 125
>gi|290999585|ref|XP_002682360.1| RNA recognition motif-containing protein [Naegleria gruberi]
gi|284095987|gb|EFC49616.1| RNA recognition motif-containing protein [Naegleria gruberi]
Length = 712
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 137/267 (51%), Gaps = 36/267 (13%)
Query: 423 ELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATA 482
+ + T+F+ NLPF +E+K F +V++V ++ + G F+KFK + A
Sbjct: 345 DFKKTVFVQNLPFQAGVDEIKAIFEKHYGLVAYVAIVAKTDGLSSGKAFVKFKRFKDAKK 404
Query: 483 AV---------------SASKTTS---------GLG-IFLKGRQLTVLKALDKKLAHDKE 517
+ AS+ S +G + L GR+L + +A+ K+ + E
Sbjct: 405 CIREAEGNLIEKQPEKKKASEKISKEPEEEEERNVGEVLLDGRKLLIARAISKQSSQ--E 462
Query: 518 IDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSR 577
I+K K + +D RNL LAK G I +P A+ + + + K Q +K TKL +P +H+S
Sbjct: 463 INKKKEKKDDPRNLRLAKIGFIAANSPEAKDMPAEHLKKIQKNWAEKNTKLNNPIYHISP 522
Query: 578 TRLVIYNLPKSMTEKGLKKLCIDAVV---SRASKQKPVIKQIKFLQSLKKGKVDTKHYSR 634
TRL I NLPKS T+K LK L +D + + +KP + Q+K + D+K S+
Sbjct: 523 TRLAIQNLPKSWTDKDLKNLVLDKIKYDEALGKGKKPKLIQVKIAKD-----KDSKQ-SK 576
Query: 635 GVAFVEFTEHQHALVALRVLNNNPSKL 661
G FVEF +H+ AL AL LNNNP L
Sbjct: 577 GFGFVEFEKHEAALCALERLNNNPKIL 603
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 219 LIIRNIPFKAKVNEIKDMFSP-VGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+ ++N+PF+A V+EIK +F GLV V I TD GLS G AFVKF +DA+ I++
Sbjct: 350 VFVQNLPFQAGVDEIKAIFEKHYGLVAYVAIVAKTD-GLSSGKAFVKFKRFKDAKKCIRE 408
Query: 278 FNGQKFGKRP 287
G K+P
Sbjct: 409 AEGNLIEKQP 418
>gi|221129177|ref|XP_002166232.1| PREDICTED: RNA-binding protein 28-like [Hydra magnipapillata]
Length = 926
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/236 (39%), Positives = 136/236 (57%), Gaps = 11/236 (4%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T+FI NL ++ + EE+++ F FGE+ V+ Q T +G+ F+KFK VE+A A V
Sbjct: 478 TVFIRNLSYNTNEEEIEEEFEKFGEIEYCKLVVDQQTGSSRGSAFVKFKEVESAEACVKE 537
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHD--KEIDKSKNETNDHRNLYLAKEGLILEGTP 544
+ + + + GR L V A+ K ++ +E +K ET D RNLYLA EG+I +P
Sbjct: 538 TSGENQNSVSIDGRALVVSLAVTKGKVNEIVREKMDAKKET-DKRNLYLAYEGMITRNSP 596
Query: 545 AAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS 604
AAEG+SD D+ KR+ +K KL++PN+ VSRTRL + NLP +++ LK + AV +
Sbjct: 597 AAEGLSDADLKKREKALIEKKAKLKNPNYFVSRTRLSVRNLPLNISSIELKDAFLKAVKN 656
Query: 605 RASKQKPVIKQIKFLQSLKKGKVDTKHYSR--GVAFVEFTEHQHALVALRVLNNNP 658
K I +K + S K + D+K R G F+E H+HAL LR NNNP
Sbjct: 657 DDIK----INNVKIMTS--KDRKDSKGMPRSLGFGFLEVGVHEHALAILRATNNNP 706
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 118/275 (42%), Gaps = 46/275 (16%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTG-LSKGFAFVKFTCKRDAESAIQK 277
L +RN+PF ++++ FS G + ++ + D +GF +V+F + D + A++
Sbjct: 14 LFVRNLPFDINAQKLEEEFSKFGPIKKAFVVKDKDNASRCRGFGYVQFVLQADTDKALK- 72
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDDSN 337
G R + +A N ++N D+S+
Sbjct: 73 -TKLCIGNRDLKCSYA---NKKPKHEKRKKIEN-----------------------DESD 105
Query: 338 SSEKEDLPS--NADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTVNE 395
+E ++L + N D++ + + NK S+P + ++ VK + ++ + K + E
Sbjct: 106 QTENKNLSNEENIQKDQKASFSSQP-NKNIKFKKSIPIIDENIQNVKSSSDEKT-KCIKE 163
Query: 396 --SAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVV 453
+ +SD + N+ KPKS +LQ T+ I L + + ++ FGE+
Sbjct: 164 KLTKSISDPNLQNTENQKPKS--------DLQRTLVISGLTAKVKRKNIRILCEQFGEIE 215
Query: 454 SFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASK 488
+ V + V+ R + T F++FK ++ AV K
Sbjct: 216 NIV---YPVSDRAEVTAFVRFKDFKSTIRAVQKIK 247
>gi|380470517|emb|CCF47704.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 769
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 140/537 (26%), Positives = 236/537 (43%), Gaps = 95/537 (17%)
Query: 189 VALLHQKEIKGGTVWARQLGGEGSKTQKW-------KLIIRNIPFKAKVN-EIKDMFSPV 240
VA ++ K V A G + +TQ+ KLIIRN+P+ K + ++ +F
Sbjct: 124 VAEARSRDSKESVVGAAAAGQKQKRTQELEEARKPPKLIIRNLPWSIKTSAQLGALFRAY 183
Query: 241 GLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYS 300
G++ +P N G KGF FV +++AE A++ NG++ R IAVDWAV K+ +
Sbjct: 184 GIIKFADLPQNK--GKLKGFGFVTLRGRKNAEKALE-MNGKEIDGRTIAVDWAVDKSEW- 239
Query: 301 SGGAAAGVQNKGDGNSDSGSDDD--------LGDDDAETASDDSNSSEKEDLPSNADFDE 352
++ +G D+ +D+ + + E ++D +S++ P AD D
Sbjct: 240 ---------DQVNGTKDAADEDEKPKSKKQKVATKEEEGPAEDGEASKE---PQGADADL 287
Query: 353 EVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTVNESAKVSDVSKLNSSKSKP 412
E + + + L S + +D + + S+ E A +D K
Sbjct: 288 E-NFMKNHMMNLEDEEDSDENKDEDEEEDEDEDDDLSEDDDEEDASNADNDK-------- 338
Query: 413 KSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFL 472
K +K+T+ + +T+FI NLPF + ++++K+ F FG V V+ + T RP GTGF+
Sbjct: 339 KPVKKTQTSTDNTSTLFIRNLPFTVTDDQLKEHFVKFGPVRYARVVMDRATDRPAGTGFV 398
Query: 473 KFKTVEAATAAVSASKTTSGLGIFLK------------------GRQLTVLKALDKKLAH 514
F A A + + T + K R L V +A+ K A
Sbjct: 399 CFVNEADAKACIKGAPRTQPTTLPTKHSVLQDDSADQDGRYTMDSRLLQVAQAVSKDDAE 458
Query: 515 DKEIDKSKNETN-DHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQS-PN 572
D S + D R L+L EG I + ++ +++ R+ +++ +QS P
Sbjct: 459 RLAADGSASRREKDKRRLFLLNEGQIDTRSTLYHKLTPNEIKMREDSAKQRKKLVQSNPT 518
Query: 573 FHVSRTRLVIYNLPKSMTEKGLKKLCIDAVV----------------------------- 603
H+S TRL I N+P+++ K LK+L A V
Sbjct: 519 LHISLTRLAIRNIPRNLGSKELKELARKACVEFAKDVKEGRRQPLSKEEKVRSAKEAKEG 578
Query: 604 --SRASKQKPVIKQIKF-LQSLKKGKVD--TKHYSRGVAFVEFTEHQHALVALRVLN 655
R K+K +++Q K +S + KV + SRG F+E++ H+ AL+ LR LN
Sbjct: 579 EHERKLKRKGIVRQAKIEFESREGAKVPEVSGGKSRGYGFIEYSSHRWALMGLRFLN 635
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +R++P A + D FS V + + + T S+G+ FV T DA A +K
Sbjct: 51 LFVRSLPATATSESLTDFFSEHFPVKHATVVLDKATKASRGYGFVTLTDAEDAMEAKKKL 110
Query: 279 NGQKFGKRPIAVDWAVPKNIYSS----GGAAAGVQNK 311
N + R I VD A ++ S G AAAG + K
Sbjct: 111 NNMMWEGRRIRVDVAEARSRDSKESVVGAAAAGQKQK 147
>gi|384487651|gb|EIE79831.1| hypothetical protein RO3G_04536 [Rhizopus delemar RA 99-880]
Length = 687
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 150/312 (48%), Gaps = 67/312 (21%)
Query: 411 KPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTG 470
KP+ L T E T+F+ NL F+ E++KQ F +G VV VT+ +GTG
Sbjct: 305 KPRKLGPTPSEG---RTLFVRNLLFESTEEDLKQLFKQWGPVVYAKITRDPVTRLSRGTG 361
Query: 471 FLKFKTVEAATA----------------------------------------AVSASKTT 490
F+ K E A ++ ++T
Sbjct: 362 FVCMKKKEDAAKCLEEAEALRNLSQKDENNDSEAMNQLLSKREKKKKGLMFKSIITPEST 421
Query: 491 SGLG--IFLKGRQLTVLKALDKKLAHD-KEIDKSKNETNDHRNLYLAKEGLILEGTPAAE 547
SG G L GR L V A+D++ A K+ ++S+ + D RNLYL +EG++ GTPAAE
Sbjct: 422 SGDGSKFTLNGRVLDVTLAVDREQAKQIKDNNESQKKKEDKRNLYLMREGVVFPGTPAAE 481
Query: 548 GVSDDDMSKRQM-LHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAV---- 602
++ +++KRQ+ +K +P+ ++S+TRL I NLP + +K LK L I +V
Sbjct: 482 TMTQAELTKRQLSFSSRKKLISNNPSLYISKTRLSIRNLPVKVDDKELKALGISSVQKFK 541
Query: 603 ----------VSRASKQK-----PVIKQIKFLQSLKKGKVDTKHY-SRGVAFVEFTEHQH 646
+++ K++ P IKQ K ++S + V T S+G F+EF+ H H
Sbjct: 542 NEVKANVRTDLTKEEKEEGWQYLPRIKQAKIIRSKDRIDVATNQLRSKGYGFLEFSTHAH 601
Query: 647 ALVALRVLNNNP 658
AL +LR LNNNP
Sbjct: 602 ALASLRYLNNNP 613
>gi|195027862|ref|XP_001986801.1| GH21568 [Drosophila grimshawi]
gi|193902801|gb|EDW01668.1| GH21568 [Drosophila grimshawi]
Length = 665
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/240 (35%), Positives = 125/240 (52%), Gaps = 13/240 (5%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T+FI N+PFD ++ ++++ FG V + V+ KGT F+KFK E+A + A
Sbjct: 235 TVFIKNVPFDAEDADLRKVCRKFGVVNYAIINRESVSGHSKGTAFVKFKAKESADLCLQA 294
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNET-NDHRNLYLAKEGLILEGTPA 545
G L L AL + K+ SK++ D RNLYLA+EGLI+ + A
Sbjct: 295 -----GTEFTLLNDVLDPHPALSRDEIKTKQTKDSKDDAGKDSRNLYLAREGLIMANSKA 349
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
A+GVS DM++R L + K L++ N VSR RL I+NLP + + LK++ R
Sbjct: 350 ADGVSASDMARRHELEQVKTQVLKNLNRFVSRNRLSIHNLPLNYDNEKLKQMATSYTGFR 409
Query: 606 ASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPSKLFYHH 665
+ + V+++ K +GK S+G F+ F HQ AL ALR LNNNP+ H
Sbjct: 410 PHECR-VMREQKVTPEHPQGK------SKGFGFLSFDTHQRALAALRKLNNNPTIFGTQH 462
>gi|149244924|ref|XP_001527005.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449399|gb|EDK43655.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 795
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 139/287 (48%), Gaps = 61/287 (21%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
+IF+ N+P+D D +K+ F +FG V +PV+ + T +G+ F+ FKT +A T +
Sbjct: 361 SIFVRNIPYDADESSLKEHFESFGPVKYALPVIDKETGLARGSAFVAFKTAKAYTECLEN 420
Query: 487 SKTTSGLGIFL-----------KGRQLTVLKALDKK----------LAHDKEIDKSKNET 525
+ + +G L +GR L+++ A+D++ L +E K+ E
Sbjct: 421 APSNTGSTSMLIADDVSPQYVYQGRILSIVSAVDRQSADKLAERNSLKRKEEFGKAPAEK 480
Query: 526 NDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL-QSPNFHVSRTRLVIYN 584
D RNLYL EG I E + A+ +S DM R+ ++ ++ +L ++P H+S TRL I N
Sbjct: 481 -DKRNLYLLNEGRITEHSKLAQFISKTDMELREKSYKLRVQQLNKNPTLHLSLTRLAIRN 539
Query: 585 LPKSMTEKGLKKLCIDAVV------------------------------------SRASK 608
LP++M K LK L AVV S+ SK
Sbjct: 540 LPRAMNAKALKALGRKAVVQFATEVKEGKRQPLSKEEVSRSNKLRKEILEEIEEKSKNSK 599
Query: 609 QKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLN 655
K V+KQ K + + KG D + SRG F+EF +H+ AL LR LN
Sbjct: 600 HKGVVKQAKVIMEV-KGSGD-EGRSRGYGFIEFRDHKAALQGLRWLN 644
>gi|268533114|ref|XP_002631685.1| Hypothetical protein CBG20878 [Caenorhabditis briggsae]
Length = 605
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 123/240 (51%), Gaps = 13/240 (5%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+F+ NL F+ E++K+ S FG++ + ++ + KGT F+ F T + AS
Sbjct: 262 VFLRNLSFETKVEQIKEELSKFGQIDLAIICKYKDSGHSKGTAFVHFST------PLEAS 315
Query: 488 KTTSGL--GIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
G+ G+ + R + A+ +K A D E DK D RNL LA+ GLI +GT A
Sbjct: 316 NCIEGIEDGLIIDNRLVKANLAIPRKEAADMEKDKLTKVPKDKRNLRLARFGLIRDGTAA 375
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
A G+S +D +KR+ + E KL++ N +S RL I+NLP+ + + LK+L + +
Sbjct: 376 AAGMSKEDATKRERIAEAMRKKLENTNMFISPVRLCIHNLPQKVNDVKLKELAQKSTSAG 435
Query: 606 ASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPSKLFYHH 665
A V+ + + K+ D K S G F+ F EH HAL L+ LNNNP H
Sbjct: 436 A-----VVTECRVWLDKKRLTPDGKPKSSGFGFIAFKEHMHALECLKKLNNNPDTFTKDH 490
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Query: 204 ARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNT-DTGLSKGFAF 262
A +L E +KT++W+LIIRN+PFK K +++++ S +G + +P + D S GF F
Sbjct: 70 AVRLKFERAKTKEWRLIIRNLPFKTKKEDLQNICSNIGPFAEIVLPPSKKDPKTSAGFGF 129
Query: 263 VKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGG 303
++F K DAE + FN K R +A DWA+ K+ Y +
Sbjct: 130 IQFVKKEDAEKGREYFNSNKILGRAVAADWALDKDTYETNA 170
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ +RN+ F+ KV +IK+ S G + I D+G SKG AFV F+ +A + I+
Sbjct: 262 VFLRNLSFETKVEQIKEELSKFGQIDLAIICKYKDSGHSKGTAFVHFSTPLEASNCIEGI 321
Query: 279 -NGQKFGKRPIAVDWAVPK 296
+G R + + A+P+
Sbjct: 322 EDGLIIDNRLVKANLAIPR 340
>gi|170572451|ref|XP_001892111.1| RNA binding motif protein [Brugia malayi]
gi|158602842|gb|EDP39064.1| RNA binding motif protein, putative [Brugia malayi]
Length = 492
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 121/227 (53%), Gaps = 6/227 (2%)
Query: 432 NLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTS 491
NL ++ ++E+K+ S FG + V + ++ PKGT F+ F+T + A +SA
Sbjct: 136 NLSYETTDKELKEALSKFGNISLAVLCYYAGSEHPKGTAFVHFETADGAEKCLSA--IDQ 193
Query: 492 GLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSD 551
GI + GR++ +AL + A E +K + D RNL+L + G I G+ AA G+S+
Sbjct: 194 APGILIGGRRIFGHQALPRSEAARIEKEKLSKKPKDKRNLFLLRAGFIRPGSTAAAGMSE 253
Query: 552 DDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKP 611
D KR + KL++ + VS TRLV++NLPK +T+K + +C A + +K
Sbjct: 254 ADAEKRARMAVVARKKLKNLHMFVSPTRLVVHNLPKPLTDKAFRSMCFIAAGNPDAK--- 310
Query: 612 VIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
I + + + K + SRG FV F H+ AL A++ LNNNP
Sbjct: 311 -ITECRIWRDRNKLGTSGEAVSRGFGFVNFLNHEDALSAMKHLNNNP 356
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 212 SKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSK---GFAFVKFTCK 268
S+ + W+LI+RN+PFK +++ +F G + + +P D GFAF++F +
Sbjct: 57 SQYKSWRLIVRNLPFKTTQEDLQTVFGNFGPLSEIVLPKCKDKRFPNSCAGFAFIQFRKR 116
Query: 269 RDAESAIQKFN-GQKFGKRPIAVD 291
++A AI+K N +KF R ++ +
Sbjct: 117 QNAMEAIEKLNMSEKFCFRNLSYE 140
>gi|19112906|ref|NP_596114.1| RNA-binding protein (predicted) [Schizosaccharomyces pombe 972h-]
gi|74676076|sp|O74400.1|YOCE_SCHPO RecName: Full=Uncharacterized RNA-binding protein C4F6.14
gi|3560147|emb|CAA20734.1| RNA-binding protein (predicted) [Schizosaccharomyces pombe]
Length = 674
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 135/494 (27%), Positives = 215/494 (43%), Gaps = 97/494 (19%)
Query: 218 KLIIRNIPFKAK-VNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
+LIIRN+P+ K ++ FS G V + IP G GFAFV ++ AE A+
Sbjct: 108 RLIIRNLPWSIKKPQHLEPHFSKFGKVREIKIP-TKGGGRMCGFAFVWMKDRKAAEEAMN 166
Query: 277 KFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDDS 336
NG + RPIAVDWAV K+ + + D+ S+ +++ E SD+
Sbjct: 167 SLNGTEIDGRPIAVDWAVSKDAFEATTL-----------KDASSE----EENKEFVSDEG 211
Query: 337 NSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTVNES 396
+S ED ++++ +EEVD S+ L ++E E
Sbjct: 212 HSIVTEDASADSESEEEVD-----------------GHSEGKELAGESEE--------EG 246
Query: 397 AKVSDVSKLNSSKSKPKSLKQTEGEDE-LQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF 455
+ V DV S S S+ ++E L++T+F+ NL F+ +E+ F FG +
Sbjct: 247 SNVDDVEDSGDSSSDKNSINHEIRDNEGLEDTVFVRNLLFECTEQELYNHFRQFGPLAYA 306
Query: 456 VPVLHQVTKRPKGTGFLKFK-------TVEAATAAVSASKTTS------------GLG-- 494
V T R G GF+KF+ +E A+ + T + G+
Sbjct: 307 KLVKDPATDRSLGRGFIKFRYEKDCQNCLEMASQLPTQEPTEAEKRFLPSVLVDEGIDTD 366
Query: 495 -----IFLKGRQLTVLKALDKKLAHD---KEIDKSKNETN---DHRNLYLAKEGLILEGT 543
L GR L V A+ +K A D K + + K + D R+L+L EG I
Sbjct: 367 SVSSRFLLHGRLLKVTSAVTRKEASDINQKSLQERKQKMGKGVDRRHLFLLNEGKIAADH 426
Query: 544 PAAEGVSDDDMSKR-QMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAV 602
P +S+ D + R Q + ++K ++P H+S RL I N+ + + K L L A+
Sbjct: 427 PLFNSLSETDKTLRSQSIAQRKKLLEKNPTLHLSLNRLSIRNISRHIDPKILAMLGRQAI 486
Query: 603 ------VSRASKQKPV-----------IKQIKFLQSLKKGKVDTKH----YSRGVAFVEF 641
VS+ + +K+ K LK+ KV+T+ S+G F++F
Sbjct: 487 RGFMDDVSKGLRANITEEEENLDKGHRLKRGKSGGVLKQAKVETEKAGAGRSKGFGFMQF 546
Query: 642 TEHQHALVALRVLN 655
H++AL+ALR LN
Sbjct: 547 ISHKYALMALRWLN 560
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 47/78 (60%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +RN+ F+ K +++ + FS VG + + + N +TG ++G+ FV F+ DA+ A ++
Sbjct: 7 LFVRNLAFQTKQDDLTNFFSDVGPIKHAVVVTNPETGENRGYGFVTFSMLEDAQRAAKEL 66
Query: 279 NGQKFGKRPIAVDWAVPK 296
+K R + +D+A P+
Sbjct: 67 KNKKLHGRILRLDFATPR 84
>gi|225683698|gb|EEH21982.1| nucleolar protein [Paracoccidioides brasiliensis Pb03]
Length = 730
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 140/510 (27%), Positives = 211/510 (41%), Gaps = 127/510 (24%)
Query: 215 QKWKLIIRNIPFK-AKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAES 273
Q KLIIRN+P+ A+ +++ +F G V + IP + GF FV +++AE
Sbjct: 156 QPPKLIIRNLPWSIAEPEQLEVLFRSFGKVKHAVIPKKGNK--HSGFGFVVLRGRKNAEK 213
Query: 274 AIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETAS 333
A++ NG++ R +AVDWA KNI+ +QN DG D
Sbjct: 214 ALEAVNGKEVDGRTLAVDWAAEKNIWDE------LQNHTDGVKD---------------- 251
Query: 334 DDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTV 393
N +EKED S + DEE K QD D +
Sbjct: 252 ---NGTEKEDNKSGEE-DEET------------------------------KNQDDDVAM 277
Query: 394 NESAKVSDVSKLNSSKSKPKSLK-QTEGEDELQ-NTIFICNLPFDLDNEEVKQRFSAFGE 451
E + ++ + E ED+ +T+FI NLPF +E + + F FG
Sbjct: 278 GEVDDEDEGEDVDDDDDDDDDEEVHAEVEDDRNASTVFIRNLPFTATDESLYEHFVQFGP 337
Query: 452 VVSFVPVLHQVTKRPKGTGFLKFKTVEAATA-------------AVSASKTTSGL----- 493
+ V T RP+GT F+ F E A + A A TS +
Sbjct: 338 LRYARVVFDPETDRPRGTAFVCFWDKENANSCLRDAPKRTDLPRAEDAKAKTSTIKYSVL 397
Query: 494 --------GIF-LKGRQLTVLKALDKKLAHDKEID-KSKNETNDH--RNLYLAKEGLILE 541
G + + GR L + A+ K A E + S+ ET D R L+L EG I
Sbjct: 398 EDEKKDPSGRYTMDGRVLQLSPAVSKSQAVKLEAEGSSRRETRDKDKRRLFLLSEGTIPS 457
Query: 542 GTPAAEGVSDDDMSKRQMLHEKKMTKLQS-PNFHVSRTRLVIYNLPKSMTEKGLKKLCID 600
+ + +S +++ R+ +++ ++S P H+S TRL + NLP+++ K LK L +
Sbjct: 458 TSALYKQLSPSEIAMREASAKQRQKLIKSNPVLHLSLTRLSVRNLPRNIDSKALKALARE 517
Query: 601 AVVS-------------------------------RASKQKPVIKQIKFLQSLKKG-KVD 628
AVV R SK K +I+Q K + K+G K+D
Sbjct: 518 AVVGFAKDVKSGLREPLSREELQRSNEDMKEAEKLRKSKGKGIIRQAKVVFEGKEGSKID 577
Query: 629 TKH---YSRGVAFVEFTEHQHALVALRVLN 655
K SRG F+E+ H+ AL+ LR LN
Sbjct: 578 EKSGAGRSRGYGFIEYYSHRSALMGLRWLN 607
Score = 45.4 bits (106), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +R++P A + D FS + + + + T SKG+ FV F D A+++F
Sbjct: 50 LFVRSLPLSATTESLTDYFSQSYPLKHATVVLDPQTKQSKGYGFVTFADSEDVARALEEF 109
Query: 279 NGQKFGKRPIAVDWAVPKN 297
NG F + + ++ A P++
Sbjct: 110 NGSVFDGKKLKIEVAEPRH 128
>gi|157119234|ref|XP_001653314.1| RNA-binding protein, putative [Aedes aegypti]
gi|108875412|gb|EAT39637.1| AAEL008572-PA [Aedes aegypti]
Length = 603
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 127/234 (54%), Gaps = 16/234 (6%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T+FI N+P+D D +K S FG V + +V+ KGT F+ FK +++A +
Sbjct: 183 TVFIKNVPYDADESTIKDVMSQFGTVEKVLINKERVSGHSKGTAFVIFKLMDSAEMSRKQ 242
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNET-NDHRNLYLAKEGLILEGTPA 545
S I + + + +L+AL KK +KE SK++ D RNLYL KEG+I+ G+P+
Sbjct: 243 S-----FKIQINNQFIEILEALKKKQIREKE---SKDKVPKDSRNLYLLKEGVIMAGSPS 294
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
A+ VS DM++R L ++ L+S N VSR RL I+NLP + T L+++ V +
Sbjct: 295 AKEVSKSDMAQRLQLEQRCAQMLKSLNRFVSRERLTIHNLPANYTNNDLRQM-----VQK 349
Query: 606 ASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPS 659
+ + P + + ++ K + SRG F+ F H AL LR LNNNPS
Sbjct: 350 HAGKNP--HECRVMRENKPSFGNPSGQSRGYGFLSFKTHAIALEVLRKLNNNPS 401
>gi|241948723|ref|XP_002417084.1| nucleolar protein Nop4, putative [Candida dubliniensis CD36]
gi|223640422|emb|CAX44674.1| nucleolar protein Nop4, putative [Candida dubliniensis CD36]
Length = 740
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 143/288 (49%), Gaps = 60/288 (20%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
+IFI N+P+D D E +K+ FS FG V +PV+ + T KG+ F+ F +A +
Sbjct: 311 SIFIRNIPYDADAESLKEHFSTFGSVKYALPVVDKETGLSKGSAFVAFAKEDAYLDCLEN 370
Query: 487 SKTTSGLGIFL----------KGRQLTVLKALDK----KLAHDKEIDKSKNE------TN 526
+ T + + + +GR L++ A+D+ KLA D+ + K K
Sbjct: 371 APTVASTSMLIADDVSPAYVYQGRILSIASAVDRDSASKLA-DRNLLKRKEALGKAPGEK 429
Query: 527 DHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL-QSPNFHVSRTRLVIYNL 585
D RNL+L EG I E + A+ +S D+ R+ ++ + +L ++P H+S TRL I NL
Sbjct: 430 DRRNLFLLNEGRITENSKLAQYISKTDLELREKSYKLRTQQLKKNPTLHLSLTRLAIRNL 489
Query: 586 PKSMTEKGLKKLCIDAVVSRAS-----KQKPVIKQ-----IKFLQSLKKGKVD------- 628
P++M K LK L AVV A+ K++P+ K+ +KF QS+ G+V+
Sbjct: 490 PRAMNAKALKALGRKAVVQFATEVKENKRQPLSKEEVNRSVKFKQSINGGEVEEEIAKSK 549
Query: 629 -TKH--------------------YSRGVAFVEFTEHQHALVALRVLN 655
+KH SRG F+EF +H+ AL+ LR LN
Sbjct: 550 NSKHKGVVKQAKVIMEVKGSGETGRSRGYGFIEFRDHKAALMGLRWLN 597
Score = 45.4 bits (106), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L IR+IPF A E+ + FS V + I + + G S+GF FV FT D +A+ +
Sbjct: 35 LFIRSIPFDATSEELSEYFSQFVPVKHAVIVTDNE-GKSRGFGFVSFTLDEDCLTALVES 93
Query: 279 NGQKFGKRPIAVDWA 293
KF R + VD A
Sbjct: 94 RKTKFKDRLLRVDVA 108
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 212 SKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDA 271
++ + + + IRNIP+ A +K+ FS G V + +TGLSKG AFV F K DA
Sbjct: 305 NRQEPFSIFIRNIPYDADAESLKEHFSTFGSVKYALPVVDKETGLSKGSAFVAF-AKEDA 363
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 11/69 (15%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVT-----KRPKGTGFLKFKTVEAAT 481
T+FI ++PFD +EE+ + FS FVPV H V + +G GF+ F E
Sbjct: 34 TLFIRSIPFDATSEELSEYFS------QFVPVKHAVIVTDNEGKSRGFGFVSFTLDEDCL 87
Query: 482 AAVSASKTT 490
A+ S+ T
Sbjct: 88 TALVESRKT 96
>gi|341899005|gb|EGT54940.1| hypothetical protein CAEBREN_32547 [Caenorhabditis brenneri]
Length = 621
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 119/233 (51%), Gaps = 13/233 (5%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+F+ NL F+ E++K+ S FG++ + ++ + KGT F+ F T + AS
Sbjct: 278 VFLRNLSFETKVEQIKEELSKFGQIDLAIICKYKDSGHSKGTAFVHFST------PLEAS 331
Query: 488 KTTSGL--GIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
G+ G + R + A+ +K A D E DK D RNL LA+ GLI +GT A
Sbjct: 332 NCIEGIEEGTIIDNRLVKANLAIPRKEAADMEKDKLTKVPKDRRNLRLARFGLIRDGTTA 391
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
A G+S +D +KR+ + E KL++ N +S RL I+NLP+ + + LK L + +
Sbjct: 392 AAGMSKEDAAKRERIAEAMRKKLENTNMFISPVRLCIHNLPQKINDLKLKDLAQKSTSAG 451
Query: 606 ASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
A I + + K+ D K S G F+ F EH HAL L+ LNNNP
Sbjct: 452 AQ-----ITECRVWMDKKRLTPDGKPKSSGFGFIAFKEHMHALECLKKLNNNP 499
>gi|256074424|ref|XP_002573525.1| ribonucleoprotein-related [Schistosoma mansoni]
gi|350645444|emb|CCD59892.1| ribonucleoprotein-related [Schistosoma mansoni]
Length = 451
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 129/248 (52%), Gaps = 22/248 (8%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
TIFI NL FD++ + + + FS FG + V T+ +GT F+KF VE A+ +
Sbjct: 10 TIFIRNLSFDVEEDALYKFFSQFGPLEFAKVVKDPATQHSRGTAFVKFVNVEDASNVLQQ 69
Query: 487 SKTTSGLGIF-LKGRQLTVLKALDKKLAHDKEIDKSKNETNDH--------------RNL 531
S F L+ R L + A+ + A + + K K+E ND RNL
Sbjct: 70 SDKPENAHQFSLENRTLNITIAVSRTEAQN--LRKRKHEENDSEGFVGPADAMKQKGRNL 127
Query: 532 YLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTE 591
+LA G+I G+ AEG+S +D+++R L +K KL PN+ +S RL + NLP +++
Sbjct: 128 HLASIGIIRPGSSEAEGLSKEDLARRDALLREKKKKLTDPNYFISDVRLCLRNLPLHVSD 187
Query: 592 KGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVAL 651
LK C+ + +Q I + + +++L+ G+ ++ S G FV F H++AL L
Sbjct: 188 DDLKSACMKFLKKGTDRQ---ISECRIMRNLQPGR--QQYRSLGYGFVAFNNHENALNVL 242
Query: 652 RVLNNNPS 659
LNNNP+
Sbjct: 243 HGLNNNPN 250
>gi|308502936|ref|XP_003113652.1| hypothetical protein CRE_26346 [Caenorhabditis remanei]
gi|308263611|gb|EFP07564.1| hypothetical protein CRE_26346 [Caenorhabditis remanei]
Length = 606
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 124/240 (51%), Gaps = 13/240 (5%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+F+ NL F+ E++K+ S +G++ + ++ + KGT F+ F ++ + AS
Sbjct: 263 VFLRNLSFETKVEQIKEELSKYGQIDLAIICKYKDSGHSKGTAFVHF------SSPLEAS 316
Query: 488 KTTSGL--GIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
G+ G+ + R + A+ +K A + E DK D RNL LA+ GLI +GT A
Sbjct: 317 NCIEGIEDGVIIDNRLVKANLAIPRKEAAEMEKDKLTKVPKDKRNLRLARFGLIRDGTAA 376
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
A G+S +D +KR+ + E KL++ N +S RL I+NLP+ + + LK+L +
Sbjct: 377 AAGMSKEDATKRERIAEAMRKKLENTNMFISPVRLCIHNLPQKINDAKLKELA-----QK 431
Query: 606 ASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPSKLFYHH 665
++ +I + + K+ D K S G F+ F EH HAL L+ LNNNP H
Sbjct: 432 STSAGSLITECRVWMDKKRLTPDGKPKSSGFGFIAFKEHMHALECLKKLNNNPDTFTKDH 491
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Query: 210 EGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNT-DTGLSKGFAFVKFTCK 268
E +KT++W+LIIRN+PFK K +++++ S +G + +P + D S GF F++F K
Sbjct: 81 EKAKTKEWRLIIRNLPFKVKKEDLQNICSAIGPFAEIVLPPSKKDPKTSAGFGFIQFVKK 140
Query: 269 RDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGG 303
DAE + FN K R +A DWA+ K+ Y +
Sbjct: 141 EDAEKGREYFNKNKVLGRSVAADWALDKDTYETNA 175
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ +RN+ F+ KV +IK+ S G + I D+G SKG AFV F+ +A + I+
Sbjct: 263 VFLRNLSFETKVEQIKEELSKYGQIDLAIICKYKDSGHSKGTAFVHFSSPLEASNCIEGI 322
Query: 279 -NGQKFGKRPIAVDWAVPK 296
+G R + + A+P+
Sbjct: 323 EDGVIIDNRLVKANLAIPR 341
>gi|367000057|ref|XP_003684764.1| hypothetical protein TPHA_0C01740 [Tetrapisispora phaffii CBS 4417]
gi|357523061|emb|CCE62330.1| hypothetical protein TPHA_0C01740 [Tetrapisispora phaffii CBS 4417]
Length = 697
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 141/284 (49%), Gaps = 55/284 (19%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKF---KTVEAATAA 483
++FI N+P+D E + + F+ FG+V +PV+ + T KGT F+ F K E A
Sbjct: 306 SVFIRNVPYDATEESLAEHFTKFGDVKYALPVIDRNTGLAKGTAFVAFKDQKAYEYCIAN 365
Query: 484 VSASKTTSGL-------GIFLKGRQLTVLKALDKKLAH---DKEIDKSKN------ETND 527
A+ +TS L +GR L+V + + +A+ +K +K K D
Sbjct: 366 APAAGSTSLLIGDDVLPEYVYEGRVLSVTPTVQRDVANRMAEKNAEKRKELLGKAPGERD 425
Query: 528 HRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL-QSPNFHVSRTRLVIYNLP 586
RNLYL EG + EGT A+ +S DM R+ + ++ +L ++P+ H+S TRL I NLP
Sbjct: 426 RRNLYLLNEGRVAEGTKLAQLLSKTDMEIREKSYSLRVEQLKKNPSLHISMTRLAIRNLP 485
Query: 587 KSMTEKGLKKLCIDAVVSRAS-----KQKPVIKQ---------IKFL-----QSLKKG-- 625
++MTEK LK L AVV+ A+ K+ P+ K+ KFL + LKK
Sbjct: 486 RAMTEKSLKYLARRAVVNFATEVNENKRHPLSKEEIVRSTKEKYKFLSDEEIERLKKKDK 545
Query: 626 --------------KVDTKHYSRGVAFVEFTEHQHALVALRVLN 655
K T SRG FVE+ +H+ AL+ LR LN
Sbjct: 546 KQGLVKQSKIIMEVKGTTIGRSRGYGFVEYKDHKSALMGLRWLN 589
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +R+IP + +E D FS + + I +T+ S+GF FV F + D++ A+ K
Sbjct: 24 LFVRSIPLQTTDDEFTDFFSNFAPLKHAVIVKDTNKK-SRGFGFVSFASEEDSQEALTKA 82
Query: 279 NGQKFGKRPIAVDWA 293
K + VD+A
Sbjct: 83 RTSKIQNHLLRVDFA 97
>gi|25146801|ref|NP_497077.2| Protein RBM-28 [Caenorhabditis elegans]
gi|21912363|emb|CAB05579.2| Protein RBM-28 [Caenorhabditis elegans]
Length = 608
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/241 (32%), Positives = 120/241 (49%), Gaps = 13/241 (5%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
+F+ NL +D E +K+ S FG++ + ++ + KGT F+ F T + A
Sbjct: 264 VVFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFST------PIEA 317
Query: 487 SKTTSGL--GIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTP 544
S G+ G+ + R + A+ +K A D E +K D RNL LA+ GLI +GT
Sbjct: 318 SNCIEGVEDGVIIDNRLVKANLAIPRKEAADMEKEKLTKVPKDKRNLRLARFGLIRDGTA 377
Query: 545 AAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS 604
AA G+S DD +KR+ + E KL++ N +S RL I+NLP+ + + LK+L
Sbjct: 378 AAAGMSKDDAAKRERIAEAMRKKLENTNMFISPVRLCIHNLPQKINDVKLKEL-----AQ 432
Query: 605 RASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPSKLFYH 664
+ + +I + + K+ D K S G FV F EH HAL L+ LNNN
Sbjct: 433 KFTSPGALITECRVWMDKKRLTPDGKPKSSGFGFVAFKEHMHALECLKKLNNNAETFHKD 492
Query: 665 H 665
H
Sbjct: 493 H 493
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 210 EGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVG-LVWNVYIPHNTDTGLSKGFAFVKFTCK 268
E +K ++W+LIIRN+PFK K +++++ S +G V V P D GF F++F K
Sbjct: 88 EQAKLKEWRLIIRNLPFKTKKEDLQNLCSNIGKFVEIVLPPSRKDPKTCAGFGFIQFVEK 147
Query: 269 RDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGG 303
DAE + FN K R +A DWA+ K+ Y +
Sbjct: 148 ADAEKGREFFNTNKVLGRSVAADWALDKDTYETNA 182
>gi|50543120|ref|XP_499726.1| YALI0A03509p [Yarrowia lipolytica]
gi|49645591|emb|CAG83649.1| YALI0A03509p [Yarrowia lipolytica CLIB122]
Length = 701
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 137/277 (49%), Gaps = 48/277 (17%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKF-------KTVE 478
+T+F+ N+P+D E +K+ F FG V +PV+ + T +P+GT F+ F K VE
Sbjct: 286 STVFVRNIPYDATAESLKEHFENFGAVRYALPVIDKTTGQPRGTAFVAFESSDDCDKCVE 345
Query: 479 AATAAVSAS----KTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETN-------- 526
A AA + S T +F +GR L V +A+ ++ A+ SK
Sbjct: 346 RAPAAATTSLLVADDTDPRYVF-EGRILAVTQAVQRETANKLSEHNSKKRAEALGKLPKE 404
Query: 527 -DHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQ-SPNFHVSRTRLVIYN 584
D RN++L EG I E T + DM RQ ++++ +L +P+ HVS TRL + N
Sbjct: 405 KDRRNVFLINEGRIGENTALGMTLPKADMELRQKSYDQRKKQLNGNPSLHVSLTRLALRN 464
Query: 585 LPKSMTEKGLKKLCIDAVVSRASKQK-----PVIKQ--IKFLQSLKKGKVDTKH------ 631
LP+++ KGLK L AVV A++ K P+ K+ I+ ++ + +KH
Sbjct: 465 LPRALNAKGLKALGRKAVVQFATEAKEGARQPLSKEEAIRSTKARTEEAAKSKHGVVRQA 524
Query: 632 -------------YSRGVAFVEFTEHQHALVALRVLN 655
SRG F+EF +H+ AL+ALR LN
Sbjct: 525 KVIMEQKESGELGRSRGYGFLEFRDHKAALMALRWLN 561
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%)
Query: 216 KWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAI 275
K L +R+IP + E+ D FS V + + N T SKGF FV FT + DA A+
Sbjct: 13 KTDLFVRSIPLEVTNEELADFFSQDFPVKHAVVVTNAATKESKGFGFVSFTTEEDAAEAL 72
Query: 276 QKFNGQKFGKRPIAVDWAVPK 296
K QK + + +++A P+
Sbjct: 73 LKCRKQKLKGKILQIEFAKPR 93
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Query: 422 DELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAAT 481
D+ + +F+ ++P ++ NEE+ FS V V V + TK KG GF+ F T E A
Sbjct: 10 DKGKTDLFVRSIPLEVTNEELADFFSQDFPVKHAVVVTNAATKESKGFGFVSFTTEEDAA 69
Query: 482 AAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKS 521
A+ + G L Q+ K ++K D+ + S
Sbjct: 70 EALLKCRKQKLKGKIL---QIEFAKPRERKTREDRPFESS 106
>gi|391339315|ref|XP_003743997.1| PREDICTED: RNA-binding protein 28-like [Metaseiulus occidentalis]
Length = 834
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 132/243 (54%), Gaps = 18/243 (7%)
Query: 422 DELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKT---VE 478
++L T+F+ N+ F+ + +++ FG + + ++ R KGT F+KF+ E
Sbjct: 453 EDLNRTVFLSNISFETTQKTLQEHMKKFGPYKFCLLCMDRILNRSKGTAFVKFEERADAE 512
Query: 479 AATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDK---SKNETNDHRNLYLAK 535
A++ A + T L G+ L+ A+ K+ +EI K +K + D+RNLYLA+
Sbjct: 513 KCIASLRAGELT------LDGKVLSASSAM-KRDQLQQEISKKTETKKQPKDNRNLYLAR 565
Query: 536 EGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLK 595
EG I GT A S+ D+ R L K L++ + VS TRL I+NLP + ++ L+
Sbjct: 566 EGFIRGGTAVAADCSEHDIRVRAKLEANKKKSLKNLHNFVSPTRLCIHNLPPTCDDRQLR 625
Query: 596 KLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLN 655
++ A V R++K I + + + ++K+ D K S+G FV F++H+ AL ALR +N
Sbjct: 626 RI-FAAAVDRSAK----ITEARVMLNMKRLGPDGKGTSKGFGFVNFSKHEDALKALRHVN 680
Query: 656 NNP 658
NNP
Sbjct: 681 NNP 683
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 213 KTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAE 272
K QK +LI+RN+ FKA ++ F G + +V IP D G +GFAFV+F A
Sbjct: 95 KKQKSRLIVRNLSFKATEEDLMKSFGKFGEIQSVNIPKKPD-GKMRGFAFVQFNSTPHAM 153
Query: 273 SAIQKFNGQKFGKRPIAVDWAVPKNIY 299
A+++ N + R +AVD+ V K +
Sbjct: 154 KAVKEMNMKDIKGRTVAVDFTVAKGKF 180
>gi|358056455|dbj|GAA97629.1| hypothetical protein E5Q_04307 [Mixia osmundae IAM 14324]
Length = 976
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 181/789 (22%), Positives = 298/789 (37%), Gaps = 210/789 (26%)
Query: 11 RGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVTQEVQAEDIEK 70
RGFGYV+F DA RAV+ +GTS+ +K + + L
Sbjct: 122 RGFGYVKFVERSDAERAVQTLSGTSLSDSSKKIKVTLAKPRLRA---------------- 165
Query: 71 TMDNKDGVISGAEKHSSKLLESGKTVKPRKAATL----GIDLADKEDCSQKQRVA-RTVI 125
++DG ++ K + + + + R A TL +D ++ K +A R+V+
Sbjct: 166 ---DEDGQLTKPGKAAPAWVARKEAIHAR-AQTLIKPEAVDAPSEDGKDHKSEIANRSVL 221
Query: 126 IGGL---------------LNADMAEEVHR-LAGSIGT---------VCSVTYPLPKEEL 160
+ GL + A+ +H+ + S+G+ + V YP+
Sbjct: 222 VQGLSPTAPVPKPSTSEIPRKINWAKALHKHIKKSLGSSAEGQQKAALFDVAYPV----- 276
Query: 161 EQHGLAQEGCKMDASAVLYTTVKSACASVALLHQKEIKGG-----TVW-----ARQLGGE 210
+ +G+ E A+ + +T K A LH K ++ T W RQ
Sbjct: 277 QLYGVTSETS---AAKITVSTPKQARKLALDLHGKILQASYLTAVTQWEYDATTRQGKAA 333
Query: 211 GSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLS--------KGFAF 262
G +L+ RN+ F +++ S G + ++ IP T +GFAF
Sbjct: 334 GGG----RLMFRNLDFGISELDLRTCVSQYGPIHSIDIPQTTAPSYGQAAAQSRGRGFAF 389
Query: 263 VKFTCKRDAESAIQKFNGQK----FGK---------------RPIAVDWAVPKNIYSSGG 303
V F + DA+ A++ NG+K +G+ R +AVDWA+ K + +
Sbjct: 390 VWFIRREDAQKALEGANGRKVWPGYGQEHITSAGQVEEADRGRVMAVDWALGKRDWEAAE 449
Query: 304 AAAGVQNKGDGNSDSGSDDDLGDDDAETASDDSNSSEKEDLPSNADFDEEVDIARKVLNK 363
A G +D + ++ + D E A D SN P A ++ D
Sbjct: 450 A-------GRLQADPKTHEEQ-EQDEEMAEDRSNE------PDEASETDDADEGESESES 495
Query: 364 LTSTTGSLPSLSDDSALVKGNKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDE 423
+ L D + E++ D+ + + +D +
Sbjct: 496 ESEEEIE--DLMD-------SDEKEDDEGPKQRSSSTDAA-------------------- 526
Query: 424 LQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKF--------- 474
T+F+ N+ F+ +E+ Q F FG V V+ + R KGTGF+ F
Sbjct: 527 ---TLFVRNIQFEATEDELYQVFKQFGPVRYARIVMDKKLNRSKGTGFVCFYNEAHARET 583
Query: 475 --------KTVEAATAAVSASK----------TTSGLGIFLKGRQLTVLKALDKKLAHDK 516
T + AT A A T S + L GR L V A+ ++ A
Sbjct: 584 LAESDLIHATSQPATEAKPAQNPFSVLTPDPSTISAKKLSLHGRVLGVSSAVSREQADKL 643
Query: 517 EIDKSKNE-TNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQS-PNFH 574
D+ K D RN YL +EG+++ GTP A+ ++ D+ RQ ++ + L+S P+
Sbjct: 644 REDRDKKSGKGDKRNFYLMREGVVVPGTPQAKLLTAADLEARQDSYDARKALLRSNPSLF 703
Query: 575 VSRTRLVIYNLPKSMTEKGLKKLCIDAV-------------------------------- 602
VSR RL I LP TE LK+L A+
Sbjct: 704 VSRQRLSIRQLPLHTTEGLLKRLAGWALRQWRIEVKQGKRKELLPEEREDEIKDLRPKVK 763
Query: 603 ---VSRASKQKPVIKQIKFL-QSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
+ SK ++Q K L Q+ + + S+G F++ T H AL LR N NP
Sbjct: 764 PGDTEKPSKPASRVQQAKILRQADRVDPLTNVGRSKGYGFLQMTSHADALRVLRWTNANP 823
Query: 659 SKLFYHHCF 667
+ +
Sbjct: 824 EAVLLLRSW 832
>gi|324506134|gb|ADY42627.1| RNA-binding protein 28 [Ascaris suum]
Length = 533
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 129/233 (55%), Gaps = 10/233 (4%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+F+ N+ ++ +E +K+ S FG++ + + + KG+GF+ F++ A + A
Sbjct: 226 VFVRNMTYETTDEMLKEALSKFGQIELAIICRYADSDHSKGSGFVYFESKSDADTCLDA- 284
Query: 488 KTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAE 547
T+ G+ + GR++ +AL + A E + K D RNL+L + G++ GT AA+
Sbjct: 285 -ITTDPGVTIDGRRIFGHRALPRNDAAAIEKENLKKRLKDKRNLHLLRVGIVRAGTAAAK 343
Query: 548 GVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRAS 607
G+S+ D KR L KL++ + VS RLV++NLP S+T+K L+ LC A + +
Sbjct: 344 GMSEMDAKKRAKLALAAKAKLRNLHMFVSPLRLVVHNLPTSLTDKALRSLCFLAAGNPDA 403
Query: 608 KQKPVIKQIKFLQSLKKGKVDTKHY--SRGVAFVEFTEHQHALVALRVLNNNP 658
K I + + + KG++D K SRG FV F+EH AL ALR LNNNP
Sbjct: 404 K----ITECRIWRD--KGRLDEKGTGKSRGFGFVAFSEHSDALAALRNLNNNP 450
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Query: 212 SKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSK---GFAFVKFTCK 268
+K + W+LI+RNI F K +++ + S G + +P D + GFAF++F +
Sbjct: 48 AKRKGWRLIMRNIAFNTKKEDLQVLCSKFGPFTEIVLPSCKDPRYPQSCAGFAFIQFRDR 107
Query: 269 RDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSG 302
+DA++A+Q N + R +AVDWA+ K+ Y S
Sbjct: 108 KDAKNAMQSLNMSEVNGRKVAVDWAIDKDTYESA 141
>gi|255715381|ref|XP_002553972.1| KLTH0E11418p [Lachancea thermotolerans]
gi|238935354|emb|CAR23535.1| KLTH0E11418p [Lachancea thermotolerans CBS 6340]
Length = 693
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 140/289 (48%), Gaps = 61/289 (21%)
Query: 425 QNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV 484
Q ++F+ N+P+D E +++ F FG V +PV + T KG+ F+ FK+ +A V
Sbjct: 298 QLSVFVRNVPYDATQESLEEHFGKFGPVKYALPVQDKETGLAKGSAFVVFKSKDAFDECV 357
Query: 485 S---ASKTTSGL-------GIFLKGRQLTVLKALDKKLA-HDKEIDKSKNE--------T 525
+ AS TTS L +GR L++ ALD++ A E + SK +
Sbjct: 358 NNAPASGTTSLLMSDDVPYRYVYEGRILSIAPALDRETAGRFAERNASKRKEAFGKAPTA 417
Query: 526 NDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL-QSPNFHVSRTRLVIYN 584
D RNLYL EG I EG+ A+ ++ DM R+ ++ ++ +L ++P+ H+S TRL I N
Sbjct: 418 KDKRNLYLLNEGRITEGSKLAQLLTAKDMEIRESSYKLRVEQLKKNPSLHLSLTRLAIRN 477
Query: 585 LPKSMTEKGLKKLCIDAVVSRA-------------------------------------- 606
LP++MT+K LK L A+V A
Sbjct: 478 LPRAMTDKALKALARKAIVEFAKEVNLHMRHPLSKEEIQRSTREKYKFMDEDEIAARKKK 537
Query: 607 SKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLN 655
K++ V++Q K + +K V SRG FVEF +H+ AL+ LR LN
Sbjct: 538 DKKQGVVRQAKVIMEVKGSSVGR---SRGYGFVEFRDHKAALMGLRWLN 583
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +R+IPF+A E+ + FS + + + I + + S+GF FV F + D + A++K
Sbjct: 23 LFVRSIPFEATDEELTNYFSELAPIKHAVIVKDNEKN-SRGFGFVSFAVEDDTKDALEKA 81
Query: 279 NGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSD 321
KF R + VD A + ++KGD S S S+
Sbjct: 82 RKTKFKGRLLRVDIAKRRE-----------RSKGDQRSSSSSE 113
>gi|254583980|ref|XP_002497558.1| ZYRO0F08294p [Zygosaccharomyces rouxii]
gi|238940451|emb|CAR28625.1| ZYRO0F08294p [Zygosaccharomyces rouxii]
Length = 714
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 144/306 (47%), Gaps = 66/306 (21%)
Query: 408 SKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPK 467
+K+ K L +TE + ++F+ N+P+D E + + F FG V +PV+ + T +
Sbjct: 296 AKTPRKPLNRTE-----EYSVFVKNVPYDATEESLAEHFEKFGPVKYALPVIDRETGLAR 350
Query: 468 GTGFLKFKTVEAATAAVSASKTTSGLGIFL----------KGRQLTVLKALDKKLAH--- 514
GT F+ F+ ++ + + + + +GR L++L L ++ A
Sbjct: 351 GTAFIAFRNKQSYDYCLKNAPAAGATSLLIGDDVLPEYVYEGRVLSILPTLKREQADFMA 410
Query: 515 DKEIDKSKNE------TNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL 568
+K +K K D R+LYL EG +LEG+ A +S+ DM R + ++ +L
Sbjct: 411 EKNANKRKEALGKAPGEKDRRSLYLLNEGKVLEGSKLAALLSEKDMEVRNASYNLRVEQL 470
Query: 569 Q-SPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS-------------------RASK 608
+ +P+ H+S TRL I NLP+SM +K LK L AVV R++K
Sbjct: 471 KKNPSLHLSLTRLAIRNLPRSMNDKALKALARKAVVQFAAEVKSGVRHPLSKEEIVRSTK 530
Query: 609 QKP-------------------VIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALV 649
+K V+KQ K + +K +K SRG FVEF +H+HAL+
Sbjct: 531 EKYRHMTDEEIEHQKKKDKKHGVVKQAKVINEVKGS---SKGRSRGYGFVEFKDHKHALM 587
Query: 650 ALRVLN 655
LR +N
Sbjct: 588 GLRWMN 593
>gi|444313635|ref|XP_004177475.1| hypothetical protein TBLA_0A01570 [Tetrapisispora blattae CBS 6284]
gi|387510514|emb|CCH57956.1| hypothetical protein TBLA_0A01570 [Tetrapisispora blattae CBS 6284]
Length = 742
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 142/284 (50%), Gaps = 55/284 (19%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEA----ATA 482
++F+ N+P+D E + + F+ FG V +PV+ + T KGT F+ F+ +A T
Sbjct: 316 SVFVRNVPYDASEESLVEHFTKFGPVKYALPVIDRETGLAKGTAFVAFRNKDAYEKCVTN 375
Query: 483 AVSASKTTSGLG------IFLKGRQLTVLKALDKKLAH---DKEIDKSK------NETND 527
A +A T+ +G +GR L+V LD++ A+ +K +K K D
Sbjct: 376 APAAGSTSLLIGDDVLPEYVYEGRVLSVTPTLDRENANRMAEKNAEKRKVTLGKAPTERD 435
Query: 528 HRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL-QSPNFHVSRTRLVIYNLP 586
RN+YL EG I+EGT A+ +S DM R+ + ++ +L ++P+ H+S TRL I N+P
Sbjct: 436 KRNMYLLNEGKIVEGTKLAQLLSKTDMEVREKSYNLRVEQLKKNPSLHLSMTRLAIRNIP 495
Query: 587 KSMTEKGLKKLCIDAVVSRASK--------------QKPVIKQIKFLQS----------- 621
++MTEK LK L AVV A++ Q+ ++ KF+
Sbjct: 496 RAMTEKSLKALGRRAVVEFATEVKNGVRHQLSKEEIQRSTKEKYKFMTEEQIEQQKKKDK 555
Query: 622 ----LKKGKV------DTKHYSRGVAFVEFTEHQHALVALRVLN 655
+++ K+ T SRG F+E+ +H+ AL+ LR LN
Sbjct: 556 KQGLVRQAKIIMEVKGSTIGRSRGYGFIEYRDHKSALMGLRWLN 599
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +R+IP E+ D FS + + I + D S+GF FV F + D + A+++
Sbjct: 36 LFVRSIPLDTTDGELADYFSNFAPIRHAVIVKD-DQKRSRGFGFVTFAVEEDTKEALKQA 94
Query: 279 NGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSD 317
K I VD A ++ + ++ + N D NS+
Sbjct: 95 RKTKLKNHLIRVDIAKRRDRNKTKASSEQISN--DQNSE 131
>gi|321479432|gb|EFX90388.1| CG4806-PA-like protein [Daphnia pulex]
Length = 517
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 123/238 (51%), Gaps = 43/238 (18%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T+FI NL F + +K FG V + + +V +RPKGTGF+KF+ ++A +
Sbjct: 170 TLFIRNLDFLTTKDSLKNFMEKFGSVQYALLCMDKVMERPKGTGFVKFRDSDSAQKCLEE 229
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
S+ + L GR L V A+ ++ K+ + K E D RNL+LA+EG I GT AA
Sbjct: 230 SRNPY---LQLDGRILDVALAVTREDLDHKKQEAEKKEHKDKRNLFLAREGFIRPGTLAA 286
Query: 547 EGVSDDDMSKRQM--LHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS 604
+GVS DM+KRQ L +K+M + N H+ + R +G K+ D
Sbjct: 287 QGVSPTDMAKRQQNELWKKQMLR----NLHICKNR------------RGAAKIMRD---- 326
Query: 605 RASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPSKLF 662
L+++ +G V H S+G FV FT+H+ AL+ALR +NNNP+ LF
Sbjct: 327 --------------LKAVGEGNV---HPSKGHGFVTFTKHEDALLALRNINNNPT-LF 366
>gi|341892421|gb|EGT48356.1| CBN-RBM-28 protein [Caenorhabditis brenneri]
Length = 621
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 117/232 (50%), Gaps = 11/232 (4%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKT-VEAATAAVSA 486
+F+ NL F+ E++K+ S FG++ + ++ + KGT F+ F T +EA+
Sbjct: 278 VFLRNLSFETKVEQIKEELSKFGQIDLAIICKYKDSGHSKGTAFVHFSTPLEASNCIEGI 337
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
+ +K A+ +K A D E DK D RNL LA+ GLI +GT AA
Sbjct: 338 EEGIIIDNRLVKANL-----AIPRKEAADMEKDKLTKVPKDRRNLRLARFGLIRDGTTAA 392
Query: 547 EGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRA 606
G+S +D +KR+ + E KL++ N +S RL I+NLP+ + + LK L + + A
Sbjct: 393 AGMSKEDAAKRERIAEAMRKKLENTNMFISPVRLCIHNLPQKINDLKLKDLAQKSTSAGA 452
Query: 607 SKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
I + + K+ D K S G F+ F EH HAL L+ LNNNP
Sbjct: 453 Q-----ITECRVWMDKKRLTPDGKPKSSGFGFIAFKEHMHALECLKKLNNNP 499
>gi|358340116|dbj|GAA48077.1| nucleolar protein 4 [Clonorchis sinensis]
Length = 372
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 131/237 (55%), Gaps = 23/237 (9%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKF-KTVEAATAAVS 485
TIF+ NL FD+DN+++ F+ FG + V VT +GTGF+KF + V+AA
Sbjct: 10 TIFVRNLSFDVDNDKLYDFFADFGALEFAKVVKDPVTSHSRGTGFVKFTRAVDAACVLAD 69
Query: 486 ASKTTSGLGIFLKGRQLTV-----------LKALDKKLAHDKEIDKSKNETNDH-----R 529
+ + + L R + + LK+ DK A + ++ DH R
Sbjct: 70 SCEPQNAARFTLDNRTMHLSMAISREEAQQLKSTDKTTAESADSNRPALSQADHLHQTGR 129
Query: 530 NLYLAKEGLILEGTPAAEGVSDDDMSKRQ-MLHEKKMTKLQSPNFHVSRTRLVIYNLPKS 588
NL+LA+ GLI GT AAEG++ D++KR+ +LHEKK KL++P+ +S RL + NLP +
Sbjct: 130 NLHLARVGLIRPGTAAAEGLTAQDLAKREALLHEKK-AKLRNPSIFISDLRLCLRNLPLT 188
Query: 589 MTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQ 645
+ ++ L+++C D + + K++ I + + +++L+ GK + S G AFV + H+
Sbjct: 189 VADEDLRQICADILGDKGKKRR--ITECRVMRNLQPGK--QQFRSLGYAFVSCSTHE 241
>gi|126137878|ref|XP_001385462.1| RNA recognition motif-containing protein [Scheffersomyces stipitis
CBS 6054]
gi|126092740|gb|ABN67433.1| RNA recognition motif-containing protein [Scheffersomyces stipitis
CBS 6054]
Length = 694
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 137/290 (47%), Gaps = 64/290 (22%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
IF+ N+P+D D + +++ FS FG V +PV+ + T +G+ F+ F +A T +S +
Sbjct: 306 IFVRNIPYDADEDSLEEHFSKFGPVKYALPVIDKETGLARGSAFVAFVNEDAYTDCLSNA 365
Query: 488 KTTSGLGIFL----------KGRQLTVLKALDK----KLAH-----DKEIDKSKNETNDH 528
+++ + + +GR L++ A+D+ KLA KE+ D
Sbjct: 366 PSSASTSMLIADDVSPAYVYQGRILSITSAVDRQSASKLAERNSEKRKEVLGKAPGEKDK 425
Query: 529 RNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL-QSPNFHVSRTRLVIYNLPK 587
RNLYL EG I + A+ +S DM R+ ++ ++ +L ++P H+S TRL I NLP+
Sbjct: 426 RNLYLLNEGRITSNSKLAQFISKTDMEMREKSYKLRVQQLNKNPTLHLSLTRLAIRNLPR 485
Query: 588 SMTEKGLKKLCIDAVVS------------------------------------------R 605
+M K LK L AVV +
Sbjct: 486 AMNSKALKALGRKAVVQFATEVKEEKRQPLSKEEVNRSIKHKQELGELEPKGATEEDKKK 545
Query: 606 ASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLN 655
+SK K V+KQ K + + KG DT SRG F+EF +H+ AL+ LR LN
Sbjct: 546 SSKHKGVVKQAKVIMEV-KGSGDTGR-SRGYGFIEFRDHKVALMGLRWLN 593
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +R+IPF+A E+ + FS V + I N + S+GF FV FT D +A+ +
Sbjct: 30 LFVRSIPFEATSEELSEFFSQFVPVKHAVIV-NDENQKSRGFGFVSFTLDDDTLTALVEA 88
Query: 279 NGQKFGKRPIAVDWA 293
KF R + VD A
Sbjct: 89 RKSKFKGRLLRVDIA 103
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 21/100 (21%)
Query: 414 SLKQTEGEDEL---QNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQV-----TKR 465
S+KQ+ DE + T+F+ ++PF+ +EE+ + FS FVPV H V ++
Sbjct: 13 SIKQSSSVDEDGLDRKTLFVRSIPFEATSEELSEFFS------QFVPVKHAVIVNDENQK 66
Query: 466 PKGTGFLKFKT-VEAATAAVSASKTTSGLGIFLKGRQLTV 504
+G GF+ F + TA V A K+ KGR L V
Sbjct: 67 SRGFGFVSFTLDDDTLTALVEARKSK------FKGRLLRV 100
>gi|365757976|gb|EHM99843.1| Nop4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 680
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 138/284 (48%), Gaps = 55/284 (19%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTV----EAATA 482
++F+ N+P+D E + FS FG V +PV+ + T KGT F+ FK E
Sbjct: 286 SVFVRNVPYDATEESLVAHFSKFGSVKYALPVIDRSTGLAKGTAFVAFKDQYTYNECVKN 345
Query: 483 AVSASKTTSGLG------IFLKGRQLTVLKAL---------DKKLAHDKEIDKSKNETND 527
A +A T+ +G +GR L++ L +K A KE+ D
Sbjct: 346 APAAGSTSLLIGDDVMPQYVYEGRVLSITPTLVREDAGRMAEKNAAKRKEVLGKAPSEKD 405
Query: 528 HRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL-QSPNFHVSRTRLVIYNLP 586
RNLYL EG ++EG+ A+ +++ DM R+ ++ ++ +L ++P+ H+S TRL I NLP
Sbjct: 406 RRNLYLLNEGRVVEGSKMADLLTNTDMEIREKSYKLRVEQLKKNPSLHLSMTRLAIRNLP 465
Query: 587 KSMTEKGLKKLCIDAVVSRASKQK-----PVIKQ---------IKFLQS----------- 621
++M +K LK L AVV A++ K P+ K+ KF+
Sbjct: 466 RAMNDKALKALARKAVVGFATEVKNKERHPLSKEEIIRSTKEKYKFMSPDEIETQKKKDK 525
Query: 622 ----LKKGKV------DTKHYSRGVAFVEFTEHQHALVALRVLN 655
+K+ KV T SRG FVEF +H++AL+ LR LN
Sbjct: 526 KSGIVKQAKVIMEVKGSTAGRSRGYGFVEFRDHKNALMGLRWLN 569
>gi|354543761|emb|CCE40483.1| hypothetical protein CPAR2_105190 [Candida parapsilosis]
Length = 748
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 137/287 (47%), Gaps = 61/287 (21%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
+IF+ N+P+D D E +K+ F AFG V +PV+ + T KG+ F+ FK +A +
Sbjct: 326 SIFVRNIPYDADEESLKEHFEAFGPVKYALPVIDKDTGLSKGSAFVAFKKEDAYLDCLDN 385
Query: 487 SKTTSGLGIFL-----------KGRQLTVLKALDKK----------LAHDKEIDKSKNET 525
+ + +G L +GR L++ A+D++ L + + K+ +E
Sbjct: 386 APSNTGSTSMLIADDVSPKYVYQGRILSITSAVDRQSANKLAERNALKRKEALGKAPSE- 444
Query: 526 NDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL-QSPNFHVSRTRLVIYN 584
D RNL+L EG I E + A+ ++ DM R+ ++ ++ +L ++P H+S TRL + N
Sbjct: 445 KDKRNLFLLNEGRITENSKLAQFITKTDMELREKSYKLRVQQLNKNPTLHLSLTRLAVRN 504
Query: 585 LPKSMTEKGLKKLCIDAVV------------------------------------SRASK 608
LP++M K LK L AVV S+ SK
Sbjct: 505 LPRAMNAKALKALGRKAVVQFATEVKQGQRQPLSKEEVSRSNKTKEEIQEEIEAKSKNSK 564
Query: 609 QKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLN 655
K V+KQ K + + KG + SRG F+EF +H+ AL LR LN
Sbjct: 565 HKGVVKQAKVIMEV-KGSGEAGR-SRGYGFIEFRDHKVALQGLRWLN 609
>gi|448517396|ref|XP_003867785.1| Nop4 nucleolar protein [Candida orthopsilosis Co 90-125]
gi|380352124|emb|CCG22348.1| Nop4 nucleolar protein [Candida orthopsilosis]
Length = 752
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 134/286 (46%), Gaps = 59/286 (20%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
+IF+ N+P+D D E +K+ F FG V +PV+ + T KG+ F+ FK +A +
Sbjct: 331 SIFVRNIPYDADEESLKEHFEVFGPVKYALPVVDKETGLSKGSAFVAFKEEDAYLDCLDN 390
Query: 487 SKTTSGLGIFL-----------KGRQLTVLKALDKKLAHD---------KEIDKSKNETN 526
+ + +G L +GR L++ A+D++ A+ KE+
Sbjct: 391 APSNTGSTSILIADDVSPKYVYQGRILSITSAVDRQSANKLAERNALKRKEVLGKAPAEK 450
Query: 527 DHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL-QSPNFHVSRTRLVIYNL 585
D RNL+L EG I E + A+ ++ D+ R+ ++ ++ +L ++P H+S TRL I NL
Sbjct: 451 DKRNLFLLNEGRITENSRLAQFITKTDLELREKSYKLRVQQLNKNPTLHLSLTRLAIRNL 510
Query: 586 PKSMTEKGLKKLCIDAVV------------------------------------SRASKQ 609
P++M K LK L AVV S+ SK
Sbjct: 511 PRAMNSKALKALGRKAVVQFATEVKEGQRQPLSKEEVSRSIKTKKELQEEIEVKSKNSKH 570
Query: 610 KPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLN 655
K V+KQ K + + KG + SRG F+EF +H+ AL LR LN
Sbjct: 571 KGVVKQAKVIMEV-KGSGEAGR-SRGYGFIEFRDHKAALQGLRWLN 614
>gi|68491575|ref|XP_710417.1| hypothetical protein CaO19.12665 [Candida albicans SC5314]
gi|68491598|ref|XP_710406.1| hypothetical protein CaO19.5198 [Candida albicans SC5314]
gi|46431600|gb|EAK91144.1| hypothetical protein CaO19.5198 [Candida albicans SC5314]
gi|46431612|gb|EAK91155.1| hypothetical protein CaO19.12665 [Candida albicans SC5314]
Length = 741
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 135/290 (46%), Gaps = 64/290 (22%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
+IF+ N+P+D D E +K+ FS FG V +PV+ + T KG+ F+ F +A +
Sbjct: 310 SIFVRNIPYDADTESLKEHFSTFGTVKYALPVVDKETGLAKGSAFVAFAKEDAYLDCLDN 369
Query: 487 SKTTSGLGIFL----------KGRQLTVLKALDK----------KLAHDKEIDKSKNETN 526
+ T + + + +GR L++ A+D+ L + + K+ E
Sbjct: 370 APTVASTSMLIADDVSPSYVYQGRILSIASAVDRDSASKLADRNSLKRKEALGKAPGE-K 428
Query: 527 DHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL-QSPNFHVSRTRLVIYNL 585
D RNL+L EG I E + A+ +S D+ R+ ++ + +L ++P H+S TRL I NL
Sbjct: 429 DKRNLFLLNEGRITENSKLAQYISKTDLELREKSYKLRTQQLKKNPTLHLSLTRLAIRNL 488
Query: 586 PKSMTEKGLKKLCIDAVV----------------------------------------SR 605
P++M K LK L AVV S+
Sbjct: 489 PRAMNAKALKALGRKAVVQFATEVKEGKRQPLSKEEVNRSVKFKHSIYGADAEEEIAKSK 548
Query: 606 ASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLN 655
SK K V+KQ K + + KG +T SRG F+EF +H+ AL+ LR LN
Sbjct: 549 NSKHKGVVKQAKVIMEV-KGSGETGR-SRGYGFIEFRDHKAALMGLRWLN 596
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +R+IPF+A E+ + FS V + I + + S+GF FV FT D +A+ +
Sbjct: 35 LFVRSIPFEATSEELSEFFSQFVPVKHAVIVTDNERK-SRGFGFVSFTLDDDCLTALVES 93
Query: 279 NGQKFGKRPIAVDWA 293
KF R + VD A
Sbjct: 94 RKTKFKDRLLRVDVA 108
>gi|342186596|emb|CCC96083.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 438
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 139/297 (46%), Gaps = 63/297 (21%)
Query: 421 EDELQNTIFICNLPFDLDNEEVKQRFSA-FGEVVSFVPVLHQVTKRPKGTGFLKFKTVE- 478
+D L+ +F+ LP D EE+ F+A FGEV + V ++ TK GTGFL TV+
Sbjct: 104 QDPLETQLFLKRLPLDTSEEELLNFFNARFGEVRRVLLVRNKGTKSLVGTGFLHCGTVDM 163
Query: 479 ---------------AATAAVSASKTTSGLG------IFLKGR----------------Q 501
+AT S+ T + + K R +
Sbjct: 164 ANKIFEHAQHNARELSATKRADLSEKTKDMSRCRVKRLLFKNRADVFVSREPFMTIRETR 223
Query: 502 LTVLKALDKKLAHD------KEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMS 555
T+ + L +K +H+ K+ ++K +D R+LYL +EGLIL TPAA G+ +
Sbjct: 224 FTIHRVLSRKDSHEVTAAQKKKEKRTKVAADDPRHLYLLQEGLILPDTPAARGLPPRYIE 283
Query: 556 KRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPV--- 612
Q +E + +KL++ N VS TRL + NLP+SM EK L+ L V S + K
Sbjct: 284 MIQADYENRKSKLRNSNMFVSTTRLSVRNLPRSMGEKDLRTLFSTHVRSFLKENKGFTDK 343
Query: 613 --------IKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPSKL 661
IK +K ++ D+ S+G AF+EF H AL ALR +NNNP+ L
Sbjct: 344 NNWGKYGPIKNVKIVK-------DSAGTSKGYAFIEFANHPVALHALRAINNNPTIL 393
>gi|390595344|gb|EIN04750.1| hypothetical protein PUNSTDRAFT_146379 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 989
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 134/298 (44%), Gaps = 67/298 (22%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T+F+ N+P++ EE++ F AFG + + T R +GTGF F E A A+
Sbjct: 497 TLFVRNVPYEATEEEMRTLFRAFGPLRYARITIDPETGRCRGTGFACFWNKEDADKAIEQ 556
Query: 487 S---KTTSGLG----------------------------IFLKGRQLTVLKALDKKLAHD 515
S K +GLG + L GR L V++A+ + A
Sbjct: 557 SELLKAETGLGSTPAKEKKNPFKLPSMLTPDPSAGLARNLVLHGRTLDVVRAVTRDEAGK 616
Query: 516 -KEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQS-PNF 573
KE + E D RNLYL +EGLIL +PAA G++ ++ KR H+ + L++ P
Sbjct: 617 LKEAGERAREKADKRNLYLLREGLILPNSPAAAGLAPAELEKRAAAHDARKRLLRTNPLL 676
Query: 574 HVSRTRLVIYNLPKSMTEKGLKKLCIDAV--------------VSRASKQKPV------- 612
+VSRTRL + LP +T++ LK++ I AV +S+ +P+
Sbjct: 677 YVSRTRLSVRGLPTFVTDRTLKRMAIHAVRAFEAEVGEGVREPLSKEELFEPIHEDGEQK 736
Query: 613 ------------IKQIK-FLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNN 657
+KQ K LQ+ + + K S+G FVE H AL LR NNN
Sbjct: 737 EGKKSKKGRHTAVKQAKVVLQTDRVDPITGKGRSKGYGFVEMHTHADALRVLRWANNN 794
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+P+ A +++ +FS + V + ++ +G+SKG +V F K DA+ A K
Sbjct: 25 LFVSNLPYTATSTDLQTLFSDIAPVRSAFVVTEHGSGVSKGVGYVSFAIKEDAQGAYDKI 84
Query: 279 --NGQKFGKRPIAVDWA 293
G + R + V WA
Sbjct: 85 AEEGIELDGRKLRVTWA 101
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
+T+F+ NLP+ + +++ FS V S V + KG G++ F E A A
Sbjct: 23 STLFVSNLPYTATSTDLQTLFSDIAPVRSAFVVTEHGSGVSKGVGYVSFAIKEDAQGAYD 82
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETN 526
+ GI L GR+L V A +KK HD+ K KN+ +
Sbjct: 83 ---KIAEEGIELDGRKLRVTWA-EKKGKHDEFPKKRKNDDD 119
>gi|50307217|ref|XP_453587.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642721|emb|CAH00683.1| KLLA0D11792p [Kluyveromyces lactis]
Length = 685
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 136/287 (47%), Gaps = 61/287 (21%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
+IF+ N+P+D E +++ F FG V +PV+ + T KGT F+ F++ +A ++
Sbjct: 297 SIFVRNVPYDATQESLERHFGVFGPVKYALPVIDKETGLAKGTAFVAFRSEDAYNDCLNN 356
Query: 487 SKTTSGLGIFL----------KGRQLTVLKALDKKLA---------HDKEIDKSKNETND 527
+ T + + +GR L + LD++ A KE+ D
Sbjct: 357 APATGSTSLLISDDVSPEYVYEGRVLAISPTLDRESAGRMFERNAEKRKEVLGKAPGEKD 416
Query: 528 HRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL-QSPNFHVSRTRLVIYNLP 586
RNLYL EG I+ G+ ++ ++ DM R+ ++ ++ +L ++P H+S TRL I N+P
Sbjct: 417 RRNLYLLNEGRIVAGSKLSQLLTPADMEVREKSYKLRVEQLKKNPTLHLSMTRLAIRNIP 476
Query: 587 KSMTEKGLKKLCIDAVVS-------------------RASKQKP---------------- 611
++MTEKGLK L AVV R++K+K
Sbjct: 477 RAMTEKGLKALARKAVVEFAKEVNENKRHALNKEEIVRSTKEKYKFMSEEEIEAQKKKDK 536
Query: 612 ---VIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLN 655
+++Q K + +K + SRG FVEF +H+ AL+ LR LN
Sbjct: 537 KQGIVRQSKIIMEIKGS---SGGRSRGYGFVEFRDHKAALMCLRWLN 580
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 8/119 (6%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +R +PF++ E + FS + + I + + G S+GF FV F + D ++A+ +
Sbjct: 17 LFVRGVPFESTDEEFGNFFSQFSPIKHAVIVKDGE-GASRGFGFVSFAVEDDTKTALNQA 75
Query: 279 NGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDDSN 337
KF R + +D A K S G + D S + S D++ D++ DD++
Sbjct: 76 RKTKFMGRLLRIDIA--KRRERSRG-----KKDADEVSSAPSVDNVKDEEESKPEDDND 127
>gi|238879096|gb|EEQ42734.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 741
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 135/290 (46%), Gaps = 64/290 (22%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
+IF+ N+P+D D E +K+ FS FG V +PV+ + T KG+ F+ F +A +
Sbjct: 310 SIFVRNIPYDADAESLKEHFSTFGTVKYALPVVDKETGLAKGSAFVAFAKEDAYLDCLDN 369
Query: 487 SKTTSGLGIFL----------KGRQLTVLKALDK----------KLAHDKEIDKSKNETN 526
+ T + + + +GR L++ A+D+ L + + K+ E
Sbjct: 370 APTVASTSMLIADDVSPSYVYQGRILSIASAVDRDSASKLADRNSLKRKEALGKAPGE-K 428
Query: 527 DHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL-QSPNFHVSRTRLVIYNL 585
D RNL+L EG I E + A+ +S D+ R+ ++ + +L ++P H+S TRL I NL
Sbjct: 429 DKRNLFLLNEGRITENSKLAQYISKTDLELREKSYKLRTQQLKKNPTLHLSLTRLAIRNL 488
Query: 586 PKSMTEKGLKKLCIDAVV----------------------------------------SR 605
P++M K LK L AVV S+
Sbjct: 489 PRAMNAKALKALGRKAVVQFATEVKEGKRQPLSKEEVNRSVKFKHSIYGADAEEEIAKSK 548
Query: 606 ASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLN 655
SK K V+KQ K + + KG +T SRG F+EF +H+ AL+ LR LN
Sbjct: 549 NSKHKGVVKQAKVIMEV-KGSGETGR-SRGYGFIEFRDHKAALMGLRWLN 596
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +R+IPF+A E+ + FS V + I + + S+GF FV FT D +A+ +
Sbjct: 35 LFVRSIPFEATSEELSEFFSQFVPVKHAVIVTDNERK-SRGFGFVSFTLDDDCLTALVES 93
Query: 279 NGQKFGKRPIAVDWA 293
KF R + VD A
Sbjct: 94 RKTKFKDRLLRVDVA 108
>gi|449545564|gb|EMD36535.1| hypothetical protein CERSUDRAFT_106374 [Ceriporiopsis subvermispora
B]
Length = 943
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 141/327 (43%), Gaps = 80/327 (24%)
Query: 413 KSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFL 472
K +K T E T+F+ N+PF+ +++++ F AFG + + T R +GTGF+
Sbjct: 468 KPVKPTLPPPETGTTLFVRNVPFEATDDDLRTLFRAFGPLRYARVAMDPETGRSRGTGFV 527
Query: 473 KFKTVEAATAAVSASKT----TSGLG---------------------------IFLKGRQ 501
F +E A AV S+ T+G G + L GR
Sbjct: 528 CFWNIEHADKAVEQSQILRAETTGGGSVQQPKKNPFKLPSLLTPDPSASIAQSLVLHGRT 587
Query: 502 LTVLKALDKKLAHD-KEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKR-QM 559
L V++A+ + A KE + + E D RNLYL +EG++L TPAAE + ++ KR Q
Sbjct: 588 LDVIRAVTRDEAGKLKEAGERQREKADKRNLYLLREGIVLPNTPAAELLPPAEVEKRTQS 647
Query: 560 LHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS--------------- 604
+ ++ +P+ +VSRTRL I LP TE+ LK+L I AV +
Sbjct: 648 FNARRALLRSNPSLYVSRTRLSIRQLPIHATERMLKRLAIHAVRAFEAEAKHGTRQGLTE 707
Query: 605 -------------------------------RASKQKPVIKQIKFL-QSLKKGKVDTKHY 632
+A + +KQ K + Q + + K
Sbjct: 708 DELAEVPADDAQESVKEEAEPSEQRDKKGKRKAQGRNTGVKQAKIVRQHDRVDPITGKGR 767
Query: 633 SRGVAFVEFTEHQHALVALRVLNNNPS 659
S+G F+E T H AL LR NNNPS
Sbjct: 768 SKGYGFLEMTTHADALRVLRWANNNPS 794
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 132/321 (41%), Gaps = 88/321 (27%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVE--MKNGTSVGGRKIGVKHAMHRASLEQRRSK 58
+VT++GS +G GYV FA+ EDA+ AVE K G + GR + V+ A +
Sbjct: 54 VVTEQGSGVSKGVGYVSFAIREDASSAVEKISKEGIELNGRALRVQWAASKPK------- 106
Query: 59 VTQEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQ 118
+ +EK + V + H S PR +
Sbjct: 107 -----DNDTLEKPKEKPAKVATRRPVHPS---------GPRDPLAI-------------- 138
Query: 119 RVARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASA-V 177
RTV+IGGL ++ ++ + + I V +P+ L++ G + + A V
Sbjct: 139 ---RTVVIGGLPSSIDSKAIWKKVRKIKGAEKVEWPV---------LSEVGSEDQSIAHV 186
Query: 178 LYTTVKSACASVALLHQKEIKGGTVWA---RQLGGEGSKTQKWK---------------- 218
L++T SA +V+ LH KG + A ++L G +K K
Sbjct: 187 LFSTPASANDAVSKLHAHVFKGSLLSATLKKRLDGLAKAPKKLKQATTTQNGLGPAPSRS 246
Query: 219 --LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGL-----------------SKG 259
LI+RN+PF +++ +F P G +++V IP DT +G
Sbjct: 247 SRLIVRNMPFNITEQDLRAIFLPYGPIYSVDIPEKKDTPADGDEEDDAENKQVKRPRRRG 306
Query: 260 FAFVKFTCKRDAESAIQKFNG 280
FAFV K+DAE A++ NG
Sbjct: 307 FAFVWMLSKKDAEKALEGCNG 327
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+P+ A ++K +FS + V ++ +G+SKG +V F + DA SA++K
Sbjct: 25 LFVSNLPYTATSTDLKTLFSDIAPVRTAFVVTEQGSGVSKGVGYVSFAIREDASSAVEKI 84
Query: 279 N--GQKFGKRPIAVDWAVPK 296
+ G + R + V WA K
Sbjct: 85 SKEGIELNGRALRVQWAASK 104
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
+T+F+ NLP+ + ++K FS V + V Q + KG G++ F E A++AV
Sbjct: 23 STLFVSNLPYTATSTDLKTLFSDIAPVRTAFVVTEQGSGVSKGVGYVSFAIREDASSAV- 81
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHD 515
+ S GI L GR L V A K +D
Sbjct: 82 --EKISKEGIELNGRALRVQWAASKPKDND 109
>gi|521090|emb|CAA53824.1| NOP77p [Saccharomyces cerevisiae]
gi|151942750|gb|EDN61096.1| nucleolar protein [Saccharomyces cerevisiae YJM789]
gi|256270510|gb|EEU05694.1| Nop4p [Saccharomyces cerevisiae JAY291]
gi|323335081|gb|EGA76371.1| Nop4p [Saccharomyces cerevisiae Vin13]
Length = 685
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 140/288 (48%), Gaps = 63/288 (21%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTV----EAATA 482
++F+ N+P+D E + FS FG V +PV+ + T KGT F+ FK E
Sbjct: 291 SVFVRNVPYDATEESLAAHFSKFGSVKYALPVIDKSTGLAKGTAFVAFKDQYTYNECIKN 350
Query: 483 AVSASKTTSGLG------IFLKGRQLTVLKAL---------DKKLAHDKE-IDKSKNETN 526
A +A T+ +G +GR L++ L +K A KE + K+ E
Sbjct: 351 APAAGSTSLLIGDDVMPEYVYEGRVLSITPTLVREDAGRMAEKNAAKRKEALGKAPGE-K 409
Query: 527 DHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL-QSPNFHVSRTRLVIYNL 585
D RNLYL EG ++EG+ A+ +++ DM R+ ++ ++ +L ++P+ H+S TRL I NL
Sbjct: 410 DRRNLYLLNEGRVVEGSKMADLLTNTDMEIREKSYKLRVEQLKKNPSLHLSMTRLAIRNL 469
Query: 586 PKSMTEKGLKKLCIDAVVS-------------------RASKQK-----P---------- 611
P++M +K LK L AVV R++K+K P
Sbjct: 470 PRAMNDKALKALARKAVVEFATEVKNKERHPLSKEEIIRSTKEKYKFMGPDEIEAQKKKD 529
Query: 612 ----VIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLN 655
V+KQ K + +K T SRG FVEF +H++AL+ LR LN
Sbjct: 530 KKSGVVKQAKVIMEVKGS---TAGRSRGYGFVEFRDHKNALMGLRWLN 574
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Query: 216 KWKLIIRNIPFKAK-VNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESA 274
K KLIIRN+P+ + ++K +F G V IP D L GFAFV + A
Sbjct: 146 KPKLIIRNMPWSCRDPVKLKKIFGRYGTVVEATIPRKRDGKLC-GFAFVTMKKISNCRIA 204
Query: 275 IQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGN 315
++ K R +AVD+AV KN + A N D N
Sbjct: 205 LENTKDLKIDGRKVAVDFAVQKNRWEDYKKAQPEMNDKDDN 245
>gi|259150114|emb|CAY86917.1| Nop4p [Saccharomyces cerevisiae EC1118]
Length = 685
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 140/288 (48%), Gaps = 63/288 (21%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTV----EAATA 482
++F+ N+P+D E + FS FG V +PV+ + T KGT F+ FK E
Sbjct: 291 SVFVRNVPYDATEESLAAHFSKFGSVKYALPVIDKSTGLAKGTAFVAFKDQYTYNECIKN 350
Query: 483 AVSASKTTSGLG------IFLKGRQLTVLKAL---------DKKLAHDKE-IDKSKNETN 526
A +A T+ +G +GR L++ L +K A KE + K+ E
Sbjct: 351 APAAGSTSLLIGDDVMPEYVYEGRVLSITPTLVREDAGRMAEKNAAKRKEALGKAPGE-K 409
Query: 527 DHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL-QSPNFHVSRTRLVIYNL 585
D RNLYL EG ++EG+ A+ +++ DM R+ ++ ++ +L ++P+ H+S TRL I NL
Sbjct: 410 DRRNLYLLNEGRVVEGSKMADLLTNTDMEIREKSYKLRVEQLKKNPSLHLSMTRLAIRNL 469
Query: 586 PKSMTEKGLKKLCIDAVVS-------------------RASKQK-----P---------- 611
P++M +K LK L AVV R++K+K P
Sbjct: 470 PRAMNDKALKALARKAVVEFATEVKNKERHPLSKEEIIRSTKEKYKFMGPDEIEAQKKKD 529
Query: 612 ----VIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLN 655
V+KQ K + +K T SRG FVEF +H++AL+ LR LN
Sbjct: 530 KKSGVVKQAKVIMEVKGS---TAGRSRGYGFVEFRDHKNALMGLRWLN 574
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Query: 216 KWKLIIRNIPFKAK-VNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESA 274
K KLIIRN+P+ + ++K +F G V IP D L GFAFV + A
Sbjct: 146 KPKLIIRNMPWSCRDPVKLKKIFGRYGTVVEATIPRKRDGKLC-GFAFVTMKKISNCRIA 204
Query: 275 IQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGN 315
++ K R +AVD+AV KN + A N D N
Sbjct: 205 LENTKDLKIDGRKVAVDFAVQKNRWEDYKKAQPEMNDKDDN 245
>gi|50421003|ref|XP_459044.1| DEHA2D13112p [Debaryomyces hansenii CBS767]
gi|49654711|emb|CAG87212.1| DEHA2D13112p [Debaryomyces hansenii CBS767]
Length = 719
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 139/284 (48%), Gaps = 59/284 (20%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+F+ N+P+D E +++ F FG V +PV+ + + KG+ F+ FK +A + +
Sbjct: 292 LFVRNIPYDATPESLEEHFEQFGPVKYALPVIDRESGLAKGSAFVAFKKEDAYLDCLDNA 351
Query: 488 KTTSGLGIFL----------KGRQLTVLKALDKKLAH---DKEIDKSKN------ETNDH 528
+ + + + +GR L++ A+D++ AH ++ ++K K D
Sbjct: 352 PSVASTSLLIADDVSPAYVYQGRILSIASAVDRESAHKLAERNVEKRKEILGKAPSEKDK 411
Query: 529 RNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL-QSPNFHVSRTRLVIYNLPK 587
RNLYL EG I E + A+ +S D+ R+ ++ ++ +L ++P+ H+S TRL I NLP+
Sbjct: 412 RNLYLLNEGRITENSKLAQFISKTDLEMREKSYKLRVQQLNKTPSLHLSLTRLAIRNLPR 471
Query: 588 SMTEKGLKKLCIDAVVSRAS-----KQKP------------------------------V 612
+M K LK L AVV A+ K++P V
Sbjct: 472 AMNSKALKALGRKAVVQFATEVKEEKRQPLSKEELNRSVKHKHDIGEFETDKKKTKKLGV 531
Query: 613 IKQIKFLQSLK-KGKVDTKHYSRGVAFVEFTEHQHALVALRVLN 655
+KQ K + +K G++ SRG F+EF +H+ AL+ LR LN
Sbjct: 532 VKQAKVINEIKGSGEIGR---SRGYGFIEFRDHKTALMGLRWLN 572
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 215 QKWKLIIRNIPFKAK-VNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRD--A 271
++ +LIIRN+P+ K +++K +FS G V++ YIP G GFAFV T K+D A
Sbjct: 127 RRARLIIRNLPWSCKKPDQLKKIFSKYGAVYDAYIPKKK-GGQMCGFAFV--TMKKDSAA 183
Query: 272 ESAIQKFNGQKFGKRPIAVDWAVPKNIY 299
E A++ G K R +AVD A+ K+ +
Sbjct: 184 EKAVKDSVGLKIDDREVAVDLAIEKSKW 211
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +R+IPF+A +E+++ FS V + I N + S+GF FV FT D +A+ +
Sbjct: 26 LFVRSIPFEATSSELEEFFSQFVPVKHAVI-VNDENQKSRGFGFVSFTLDEDTLTALVES 84
Query: 279 NGQKFGKRPIAVDWA 293
KF R + VD A
Sbjct: 85 RKSKFKGRLLRVDIA 99
>gi|349581770|dbj|GAA26927.1| K7_Nop4p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 685
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 140/288 (48%), Gaps = 63/288 (21%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTV----EAATA 482
++F+ N+P+D E + FS FG V +PV+ + T KGT F+ FK E
Sbjct: 291 SVFVRNVPYDATEESLAAHFSKFGSVKYALPVIDKSTGLAKGTAFVAFKDQYTYNECIKN 350
Query: 483 AVSASKTTSGLG------IFLKGRQLTVLKAL---------DKKLAHDKE-IDKSKNETN 526
A +A T+ +G +GR L++ L +K A KE + K+ E
Sbjct: 351 APAAGSTSLLIGDDVMPEYVYEGRVLSITPTLVREDAGRMAEKNAAKRKEALGKAPGE-K 409
Query: 527 DHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL-QSPNFHVSRTRLVIYNL 585
D RNLYL EG ++EG+ A+ +++ DM R+ ++ ++ +L ++P+ H+S TRL I NL
Sbjct: 410 DRRNLYLLNEGRVVEGSKMADLLTNTDMEIREKSYKLRVEQLKKNPSLHLSMTRLAIRNL 469
Query: 586 PKSMTEKGLKKLCIDAVVS-------------------RASKQK-----P---------- 611
P++M +K LK L AVV R++K+K P
Sbjct: 470 PRAMNDKALKALARKAVVEFATEVKNKERHPLSKEEIIRSTKEKYKFMGPDEIEAQKKKD 529
Query: 612 ----VIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLN 655
V+KQ K + +K T SRG FVEF +H++AL+ LR LN
Sbjct: 530 KKSGVVKQAKVIMEVKGS---TAGRSRGYGFVEFRDHKNALMGLRWLN 574
>gi|6325213|ref|NP_015282.1| Nop4p [Saccharomyces cerevisiae S288c]
gi|585573|sp|P37838.1|NOP4_YEAST RecName: Full=Nucleolar protein 4; AltName: Full=Nucleolar protein
NOP77
gi|420394|gb|AAA20590.1| Nop4p [Saccharomyces cerevisiae]
gi|1171415|gb|AAB68177.1| Nop4p: RNA recognition motif-containing protein [Saccharomyces
cerevisiae]
gi|285815494|tpg|DAA11386.1| TPA: Nop4p [Saccharomyces cerevisiae S288c]
gi|392295968|gb|EIW07071.1| Nop4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 685
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 140/288 (48%), Gaps = 63/288 (21%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTV----EAATA 482
++F+ N+P+D E + FS FG V +PV+ + T KGT F+ FK E
Sbjct: 291 SVFVRNVPYDATEESLAPHFSKFGSVKYALPVIDKSTGLAKGTAFVAFKDQYTYNECIKN 350
Query: 483 AVSASKTTSGLG------IFLKGRQLTVLKAL---------DKKLAHDKE-IDKSKNETN 526
A +A T+ +G +GR L++ L +K A KE + K+ E
Sbjct: 351 APAAGSTSLLIGDDVMPEYVYEGRVLSITPTLVREDAGRMAEKNAAKRKEALGKAPGE-K 409
Query: 527 DHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL-QSPNFHVSRTRLVIYNL 585
D RNLYL EG ++EG+ A+ +++ DM R+ ++ ++ +L ++P+ H+S TRL I NL
Sbjct: 410 DRRNLYLLNEGRVVEGSKMADLLTNTDMEIREKSYKLRVEQLKKNPSLHLSMTRLAIRNL 469
Query: 586 PKSMTEKGLKKLCIDAVVS-------------------RASKQK-----P---------- 611
P++M +K LK L AVV R++K+K P
Sbjct: 470 PRAMNDKALKALARKAVVEFATEVKNKERHPLSKEEIIRSTKEKYKFMGPDEIEAQKKKD 529
Query: 612 ----VIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLN 655
V+KQ K + +K T SRG FVEF +H++AL+ LR LN
Sbjct: 530 KKSGVVKQAKVIMEVKGS---TAGRSRGYGFVEFRDHKNALMGLRWLN 574
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Query: 216 KWKLIIRNIPFKAK-VNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESA 274
K KLIIRN+P+ + ++K +F G V IP D L GFAFV + A
Sbjct: 146 KPKLIIRNMPWSCRDPVKLKKIFGRYGTVVEATIPRKRDGKLC-GFAFVTMKKISNCRIA 204
Query: 275 IQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGN 315
++ K R +AVD+AV KN + A N D N
Sbjct: 205 LENTKDLKIDGRKVAVDFAVQKNRWEDYKKAQPEMNDKDDN 245
>gi|401623280|gb|EJS41385.1| nop4p [Saccharomyces arboricola H-6]
Length = 683
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 139/288 (48%), Gaps = 63/288 (21%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTV----EAATA 482
+IF+ N+P+D E + FS FG V +PV+ + T KGT F+ FK E
Sbjct: 289 SIFVRNVPYDATEESLAAHFSKFGSVKYALPVIDKSTGLAKGTAFVAFKDQYTYNECIKN 348
Query: 483 AVSASKTTSGLG------IFLKGRQLTVLKAL---------DKKLAHDKE-IDKSKNETN 526
A A T+ +G +GR L++ L +K A KE + K+ E
Sbjct: 349 APVAGSTSLLIGDDVMPQYVYEGRVLSITPTLVREDAGRMAEKNAAKRKEALGKAPGE-K 407
Query: 527 DHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL-QSPNFHVSRTRLVIYNL 585
D RNLYL EG ++EG+ A+ +++ DM R+ ++ ++ +L ++P+ H+S TRL I NL
Sbjct: 408 DRRNLYLLNEGRVVEGSKMADLLTNTDMEIREKSYKLRVEQLKKNPSLHLSMTRLAIRNL 467
Query: 586 PKSMTEKGLKKLCIDAVVS-------------------RASKQK-----P---------- 611
P++M +K LK L AVV R++K+K P
Sbjct: 468 PRAMNDKALKALARKAVVGFATEVKNKERHPLSKEEIIRSTKEKYKFMGPDEIESQKKKD 527
Query: 612 ----VIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLN 655
++KQ K + +K T SRG FVEF +H++AL+ LR LN
Sbjct: 528 KKSGIVKQAKVIMEVKGS---TAGRSRGYGFVEFRDHKNALMGLRWLN 572
>gi|367009970|ref|XP_003679486.1| hypothetical protein TDEL_0B01460 [Torulaspora delbrueckii]
gi|359747144|emb|CCE90275.1| hypothetical protein TDEL_0B01460 [Torulaspora delbrueckii]
Length = 692
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 137/287 (47%), Gaps = 61/287 (21%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAA----TA 482
++F+ N+P+D E + + F FG V +PV+ + T KGT F+ F + +A
Sbjct: 296 SVFVRNVPYDATEESLVEHFGKFGPVKYALPVIDRETGLAKGTAFVAFSSKQAYDDCLQN 355
Query: 483 AVSASKTTSGLG------IFLKGRQLTVLKALDKKLAHD---------KEIDKSKNETND 527
A +A T+ +G +GR L++ L ++ A + KEI D
Sbjct: 356 APAAGATSLLIGDDVQPQYVYEGRVLSISPTLKREDASNMAERNATKRKEILGKAPGERD 415
Query: 528 HRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQ-SPNFHVSRTRLVIYNLP 586
RNLYL EG + EG+ A ++ DM R+ ++ ++ +L+ +P+ H+S TRL I NLP
Sbjct: 416 RRNLYLLNEGKVAEGSQLASLLTQKDMEIREASYKLRVEQLKKNPSLHLSMTRLAIRNLP 475
Query: 587 KSMTEKGLKKLCIDAVVS-------------------RASKQK-----P----------- 611
++MT+K LK L AVV R++K+K P
Sbjct: 476 RAMTDKALKALARKAVVEFSTQVKNGERHPLSKEELVRSTKEKFKFMSPEEIDREKKKDK 535
Query: 612 ---VIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLN 655
V++Q K + +K V SRG FVEF +H+HAL+ LR +N
Sbjct: 536 KNGVVRQAKVIMEVKGSNV---GRSRGYGFVEFKDHKHALMGLRWMN 579
Score = 42.7 bits (99), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 8/106 (7%)
Query: 399 VSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPV 458
+ DV + S+K + S K +G D T+F+ ++P D+ +EE+ + FS F + V +
Sbjct: 1 MEDVKGIESAKQEVSSTKSNDGLD--MKTLFVRSIPADVTDEEMGEFFSNFAPIKHAV-I 57
Query: 459 LHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV 504
+ K+ +G GF+ F + AA+ ++ T LK R L +
Sbjct: 58 VKDAQKKSRGFGFVSFAVEDDTLAALKEARKTK-----LKDRLLRI 98
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 35/65 (53%)
Query: 212 SKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDA 271
+K + + + +RN+P+ A + + F G V + +TGL+KG AFV F+ K+
Sbjct: 290 NKVEDFSVFVRNVPYDATEESLVEHFGKFGPVKYALPVIDRETGLAKGTAFVAFSSKQAY 349
Query: 272 ESAIQ 276
+ +Q
Sbjct: 350 DDCLQ 354
>gi|50293815|ref|XP_449319.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528632|emb|CAG62293.1| unnamed protein product [Candida glabrata]
Length = 682
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 134/287 (46%), Gaps = 61/287 (21%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+P+D E + FS FG V +PV+ + T KGT F+ FK + V
Sbjct: 291 SVFVRNVPYDATEESLFDHFSKFGPVKYALPVIDKNTGLAKGTAFVAFKDEKTYKYCVDN 350
Query: 487 SKTTSGLGIFL----------KGRQLTVLKALDKKLAH---DKEIDKSKNE------TND 527
S T + + +GR L V L+++ A +K +K K D
Sbjct: 351 SPQTGATSLLIGDDVLPEYVYEGRVLAVTPTLEREHADRIAEKNAEKRKEALGKGTGEKD 410
Query: 528 HRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL-QSPNFHVSRTRLVIYNLP 586
RNLYL EG I EG+ A + DM R+ +++++ ++ ++P+ +S TRL I NLP
Sbjct: 411 KRNLYLLNEGRIAEGSQLASLLPAKDMEIREKSYKQRVEQIKKNPSLFLSMTRLAIRNLP 470
Query: 587 KSMTEKGLKKLCIDAVVS-------------------RASKQK-----P----------- 611
++MT+K LK L AVV R++K+K P
Sbjct: 471 RAMTDKTLKALARKAVVEFAKEVQNGVRHPLSKEEIVRSTKEKYKFMNPEEIEQQKKKDK 530
Query: 612 ---VIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLN 655
V+KQ K + +K V SRG FVE+ +H+HAL+ LR LN
Sbjct: 531 KHGVVKQAKIIMEVKGSTVGR---SRGYGFVEYKDHKHALMGLRWLN 574
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 216 KWKLIIRNIPFKAK-VNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESA 274
K KLIIRN+P+ + ++K +F G+V + IP D L GFAFV + + A
Sbjct: 143 KPKLIIRNMPWSCRDPTKLKKIFGKYGVVVDASIPRKRDGKLC-GFAFVTMNKISNCKKA 201
Query: 275 IQKFNGQKFGKRPIAVDWAVPKNIY 299
++ R +AVD+AV KN +
Sbjct: 202 LEDTKNLTIDGRKVAVDFAVQKNKW 226
>gi|406601496|emb|CCH46876.1| Nucleolar protein 4 [Wickerhamomyces ciferrii]
Length = 717
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 141/286 (49%), Gaps = 56/286 (19%)
Query: 425 QNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV 484
Q +IF+ NLP+D D + +K+ F FG V +PV+ + T KGT F+ F+ +A T +
Sbjct: 294 QFSIFVRNLPYDADEDTLKEHFEQFGPVRYALPVIDKETGLAKGTAFVAFRKEDAYTKCL 353
Query: 485 SASKTTSGLGIFL----------KGRQLTVLKALDKKLAHD-KEIDKSKNETN------- 526
S + S I + +GR L++ + ++ A E + K N
Sbjct: 354 SEAPDASSTSILISDDVSPAYVYQGRILSITPTVSRESASFLTEKNAQKRSENFGKAPGE 413
Query: 527 -DHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL-QSPNFHVSRTRLVIYN 584
D RNLYL EG I + A ++ D+ R+ ++ ++ +L ++P+ H+S TRL I N
Sbjct: 414 KDRRNLYLLNEGRITTSSKLASAITPIDLELREKSYKLRVQQLNKNPSLHLSLTRLAIRN 473
Query: 585 LPKSMTEKGLKKLCIDAVVSRAS-----KQKPVIKQIKFLQSLKK-------GKVDTKH- 631
LP++M K +K L AVV+ A+ K++P+ K+ + +S+K+ G+V++K
Sbjct: 474 LPRAMNAKAMKALGRKAVVAFATEVKDGKRQPLSKE-EIQRSVKEKAKLEEDGEVESKRT 532
Query: 632 ----------------------YSRGVAFVEFTEHQHALVALRVLN 655
SRG F+EF +H+ AL+ LR LN
Sbjct: 533 KKLGVVRQAKVIMEVKGSGDQGRSRGYGFLEFRDHKTALMGLRWLN 578
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +R+IPF A ++ D FS V + I + + S+GF FV F+ D ++A+++
Sbjct: 24 LFVRSIPFDATSEQLSDFFSQFCPVKHAIIVTDNEKN-SRGFGFVSFSLDDDTKTALEQS 82
Query: 279 NGQKFGKRPIAVDWA 293
KF R + VD A
Sbjct: 83 RKNKFQGRLLRVDIA 97
>gi|327301713|ref|XP_003235549.1| Nucleolar protein 4 [Trichophyton rubrum CBS 118892]
gi|326462901|gb|EGD88354.1| Nucleolar protein 4 [Trichophyton rubrum CBS 118892]
Length = 696
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 119/474 (25%), Positives = 200/474 (42%), Gaps = 111/474 (23%)
Query: 218 KLIIRNIPFK-AKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
KLIIRN+P+ + ++ +F G + + +P GF FV +++AE AI+
Sbjct: 161 KLIIRNLPWSITEPQHLELLFRSYGKIKHAVVPKKGSR--VAGFGFVVMRGRKNAERAIE 218
Query: 277 KFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDDS 336
NG++ R +AVDWAV K+ + S AAG + DG ++G D E +++
Sbjct: 219 GVNGKEVDGRTLAVDWAVEKDEWESMNKAAG---ESDGKEEAG-------DCEEAVAENE 268
Query: 337 NSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTVNES 396
+ +D S+A+ ++E D +++N+ ++D D ++ ++
Sbjct: 269 HLDVVDDGESDANSEDEEDGGVELVNE----------------------DEDEDISMGDA 306
Query: 397 AKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFV 456
+ ++ +TIFI NLPF +E + + FS FG V
Sbjct: 307 EDDELEEEEEDDRN--------------ASTIFIRNLPFSATDETLHEHFSKFGPVRYAR 352
Query: 457 PVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDK 516
VL T+RPKGT F+ F E A++ + + R + + L
Sbjct: 353 VVLDPATERPKGTAFVCFYKAEDASSCIREAPRDVDPSRSKDPRHKAATRQMHSVL---- 408
Query: 517 EIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVS 576
++E+ND Y +G +L+ + A RQ L + +P HVS
Sbjct: 409 -----EDESNDPTGKYTM-DGRVLQVSQA-----------RQKLVK------NNPMLHVS 445
Query: 577 RTRLVIYNLPKSMTEKGLKKLCIDAVVS-------------------------------R 605
TRL + NL + + K LK L +AVV R
Sbjct: 446 LTRLSVRNLTRHIDSKALKALAREAVVGFAKDVKNGLRKPISWEESRRSAALMKEADYLR 505
Query: 606 ASKQKPVIKQIKFLQSLKKG-KVDTKH---YSRGVAFVEFTEHQHALVALRVLN 655
+++K ++KQ K + K G K+ K SRG F+E+ H+++L+ LR LN
Sbjct: 506 KAQKKGIVKQAKVVFEGKDGSKMSEKSGAGRSRGYGFIEYATHRNSLMGLRWLN 559
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +R++P A + + FS + + + + T SKG+ FV FT DA+SA ++
Sbjct: 49 LFVRSLPTTATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYGFVTFTDHEDAQSAAREL 108
Query: 279 NGQKFGKRPIAVDWAVPKN 297
N F + I ++ A P++
Sbjct: 109 NNSVFEGKKIKIELAEPRH 127
>gi|260947326|ref|XP_002617960.1| hypothetical protein CLUG_01419 [Clavispora lusitaniae ATCC 42720]
gi|238847832|gb|EEQ37296.1| hypothetical protein CLUG_01419 [Clavispora lusitaniae ATCC 42720]
Length = 716
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 137/293 (46%), Gaps = 66/293 (22%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+P+D D + +K+ FS FG V +P++ ++T +G+ F+ FKT EA +S
Sbjct: 292 SVFVRNIPYDADKDSLKEHFSQFGPVKYALPMVDKMTGVARGSAFVAFKTAEAYNDCLSN 351
Query: 487 SKTTSGLGIFL----------KGRQLTVLKALDK----KLAH-----DKEIDKSKNETND 527
+ S + + +GR L++ +D+ KLA KE+ D
Sbjct: 352 APEVSNTSMLISDDVSPAYVYQGRILSIAATVDRNSASKLAERNTEKRKEVLGKDKGDRD 411
Query: 528 HRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL-QSPNFHVSRTRLVIYNLP 586
RNLYL EG I E + A+ ++ DM R+ ++ ++ +L ++ H+S TRL I NLP
Sbjct: 412 RRNLYLLNEGRITENSKLAQFITKTDMELREKSYKLRVQQLNKNATLHLSLTRLAIRNLP 471
Query: 587 KSMTEKGLKKLCIDAVV-------------------SRASKQKP---------------- 611
++MT K LK L AVV SR+ K K
Sbjct: 472 RAMTGKALKALGRKAVVQFATEVKEGSRQPLSKEEISRSVKSKHEAEGMVGDDKNEKGEK 531
Query: 612 ---------VIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLN 655
V+KQ K + + KG + SRG F+EF +H+ AL+ LR LN
Sbjct: 532 EKKKNKKQGVVKQAKVVMEV-KGNSEIGR-SRGYGFIEFRDHKSALMGLRWLN 582
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Query: 215 QKWKLIIRNIPFKAKV-NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAES 273
+K +LIIRN+P+ K + ++++F G V + YIP GL KGFAFV AE
Sbjct: 123 RKARLIIRNLPWSCKSPDTLRNIFQKYGAVHDAYIPAKKG-GLMKGFAFVTMKKHAAAER 181
Query: 274 AIQKFNGQKFGKRPIAVDWAVPKNIYSS 301
A+++ G K R +AVD AV K+ + S
Sbjct: 182 AVKESVGLKIDGREVAVDLAVEKSKWES 209
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 15/103 (14%)
Query: 415 LKQTEGEDEL-QNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVT-----KRPKG 468
+++ + +D L + T+F+ ++P D NEE+ + FS FVPV H V K+ +G
Sbjct: 8 IEEVKSDDNLDRRTLFVRSIPEDATNEELSEYFS------QFVPVKHAVIVTDEEKKSRG 61
Query: 469 TGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKK 511
GF+ F E A+ +K G FL+ + + K D+K
Sbjct: 62 FGFVSFPMDEDTLTALVEAKKQKFKGRFLR---VDIAKRRDRK 101
>gi|366991657|ref|XP_003675594.1| hypothetical protein NCAS_0C02380 [Naumovozyma castellii CBS 4309]
gi|342301459|emb|CCC69228.1| hypothetical protein NCAS_0C02380 [Naumovozyma castellii CBS 4309]
Length = 702
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 140/298 (46%), Gaps = 64/298 (21%)
Query: 416 KQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFK 475
KQ + ED +IF+ N+P+D E + FS FG+V +PV+ + T KGT F+ F+
Sbjct: 296 KQNKKED---FSIFVRNVPYDATEESLAAHFSKFGQVKYALPVIDRTTGLAKGTAFVAFR 352
Query: 476 ---TVEAATAAVSASKTTSGL-------GIFLKGRQLTVLKALDKKLAH---DKEIDKSK 522
T + A+ +TS L +GR L++ LD++ A+ +K +K K
Sbjct: 353 DHMTYKYCIDNAPAAGSTSLLIGDDVLPEYVYEGRVLSISPTLDRENANRQAEKNAEKRK 412
Query: 523 N------ETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL-QSPNFHV 575
D RNLYL EG ++EG+ A +S DM R ++ ++ +L ++P+ H+
Sbjct: 413 EFLGKAPGERDRRNLYLLNEGKVVEGSKMAALLSTKDMEIRDKSYKLRVEQLKKNPSLHL 472
Query: 576 SRTRLVIYNLPKSMTEKGLKKLCIDAVVSRAS---------------------------- 607
S TRL I NLP++M +K LK L AVV A+
Sbjct: 473 SMTRLAIRNLPRAMNDKALKALGRKAVVEFATQVSAGERHPLSKEEIVRSTKDKYRFMSP 532
Query: 608 ----------KQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLN 655
K+ ++KQ K + +K T SRG F+E+ +H+ AL+ LR +N
Sbjct: 533 DEIEHQKKKDKKNGLVKQAKIIMEIKGA---TAGRSRGYGFIEYKDHKSALMGLRWMN 587
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 216 KWKLIIRNIPFKAK-VNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESA 274
K KLIIRN+P+ + N++K +FS G V IP D L GFAFV + A
Sbjct: 142 KPKLIIRNMPWSCRDPNQLKKIFSRFGTVVEASIPKKRDGKLC-GFAFVTMKKLSNCTIA 200
Query: 275 IQKFNGQKFGKRPIAVDWAVPKNIY 299
++ K R +AVD+AV KN +
Sbjct: 201 LENTKDLKIDGRSVAVDFAVQKNRW 225
Score = 39.7 bits (91), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 15/129 (11%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T+F+ ++P D+ +EE+ FS F V V+ V K+ +G GF+ F + A+
Sbjct: 27 TLFVRSIPMDVTDEELADYFSNFAPTKHAV-VVKDVNKKSRGFGFVSFAVEDDTKEALKQ 85
Query: 487 SKTTSGLGIFLKGRQLTVLKALDK-----------KLAHDKEIDKSKNETNDHRNLYLAK 535
++ G L+ + + K D+ K I + +NE D +L K
Sbjct: 86 ARKAKLKGHLLR---VDIAKRRDRSNKPGEGDKPEKKTRTDTIARDENEEVDEESLLKGK 142
Query: 536 EGLILEGTP 544
LI+ P
Sbjct: 143 PKLIIRNMP 151
>gi|226483629|emb|CAX74115.1| RNA-binding protein 28 [Schistosoma japonicum]
Length = 387
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 21/247 (8%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQ-VTKRPKGTGFLKFKTVEAATAAVS 485
T+FI NL FD+ + + + FS FG ++ F ++ T+ +GT F+KF VE A+ +
Sbjct: 10 TVFIRNLSFDVGEDALHKFFSHFG-LLEFAKIVKDPTTQHSRGTAFVKFVNVEDASNVLK 68
Query: 486 ASKTTSGLGIF-LKGRQLTVLKALDKKLAHDKEIDKSKNETNDH------------RNLY 532
S F L+ R L + A+ + A + K + ++H RNL+
Sbjct: 69 LSAKPENAHQFSLENRTLNITLAVSRTEAQNLRKRKHDEDASEHSAGIADAMKQSGRNLH 128
Query: 533 LAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEK 592
LA G+I G+ A G+S +D++KR L K KL PN+ +S RL + NLP +++
Sbjct: 129 LASVGIIRPGSSEAVGLSKEDLAKRDALLRDKKKKLTDPNYFISDVRLCLRNLPLHVSDD 188
Query: 593 GLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALR 652
LK C + + K I + + +++L+ G+ ++ S G FV F H+ AL L
Sbjct: 189 NLKSACSNYM----KKSTGRILECRIMRNLQPGR--QQYRSLGYGFVAFNNHEDALNVLH 242
Query: 653 VLNNNPS 659
LNNNP+
Sbjct: 243 GLNNNPN 249
>gi|302817340|ref|XP_002990346.1| hypothetical protein SELMODRAFT_428790 [Selaginella moellendorffii]
gi|300141908|gb|EFJ08615.1| hypothetical protein SELMODRAFT_428790 [Selaginella moellendorffii]
Length = 510
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 110/213 (51%), Gaps = 42/213 (19%)
Query: 62 EVQAEDIEKTMDNKDGVISGAEKHSSKL--LESGKTVKPRKAATLGIDLADKEDCSQKQR 119
E++ ED E D + V+ S L LES +T+ +K LGI + K +
Sbjct: 28 EIEEEDNEDQRDKINDVVMQKVGMISCLNILES-QTIS-KKIVDLGIAVVSKVE------ 79
Query: 120 VARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVLY 179
ARTV+IG N++ AE V LA +GTV SV L + + QHG + +GC + A+A+++
Sbjct: 80 PARTVVIG---NSETAEAVLTLAKKLGTVESVEKNLSEAYINQHGFSWDGCNLPAAAIVF 136
Query: 180 TTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSP 239
T+V +A ++A H + + WARQLGGEGSK +KW+LI+RN+P +
Sbjct: 137 TSVTAARQAIATYHLQNLGNEVFWARQLGGEGSKLKKWRLIVRNLPSR------------ 184
Query: 240 VGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAE 272
SKGF F+ +TCK D E
Sbjct: 185 -----------------SKGFEFIGYTCKNDTE 200
>gi|403213408|emb|CCK67910.1| hypothetical protein KNAG_0A02210 [Kazachstania naganishii CBS
8797]
Length = 682
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 138/287 (48%), Gaps = 61/287 (21%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS- 485
+IFI N+P++ +E + + F+ FG V +PV + T KGT F+ FK A V
Sbjct: 291 SIFIRNVPYEATSESLAEHFAKFGPVKYALPVFDKETGLAKGTAFVAFKDETAYKFCVDH 350
Query: 486 --ASKTTSGL-------GIFLKGRQLTVLKALDKKLAH---DKEIDKSKN------ETND 527
A+ TTS L +GR L+V L ++ A+ +K +K K D
Sbjct: 351 APAAGTTSLLIDDDVMPEYVYEGRVLSVTPTLQREEANFRAEKNAEKRKEFLGKAPGERD 410
Query: 528 HRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL-QSPNFHVSRTRLVIYNLP 586
RNL+L EG + EG+ + +S DM R+ ++ ++ +L ++P+ H+S TRL I NLP
Sbjct: 411 RRNLFLLNEGKVTEGSKLGQLLSTKDMEIREQSYKLRVEQLKKNPSLHLSLTRLAIRNLP 470
Query: 587 KSMTEKGLKKLCIDAVVS-------------------RASKQK-----P----------- 611
++M +K LK L AVV R++K+K P
Sbjct: 471 RAMNDKTLKALGRKAVVQFATEVKNGERHPLSQEEIVRSTKEKYKLLSPDEITQLKKKDK 530
Query: 612 ---VIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLN 655
++KQ K + +K V SRG F+E+ +H+HAL+ LR LN
Sbjct: 531 KHGIVKQAKVIMEVKNSTVGR---SRGYGFIEYKDHKHALMGLRWLN 574
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 203 WARQLGGEGSKTQK--WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGF 260
W + +G K + + + IRN+P++A + + F+ G V + +TGL+KG
Sbjct: 274 WEAKKSADGPKNMREDYSIFIRNVPYEATSESLAEHFAKFGPVKYALPVFDKETGLAKGT 333
Query: 261 AFVKF 265
AFV F
Sbjct: 334 AFVAF 338
>gi|226483627|emb|CAX74114.1| RNA-binding protein 28 [Schistosoma japonicum]
Length = 387
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 21/247 (8%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQ-VTKRPKGTGFLKFKTVEAATAAVS 485
T+FI NL FD+ + + + FS FG ++ F ++ T+ +GT F+KF VE A+ +
Sbjct: 10 TVFIRNLSFDVGEDALHKFFSHFG-LLEFAKIVKDPTTQHSRGTAFVKFVNVEDASNVLK 68
Query: 486 ASKTTSGLGIF-LKGRQLTVLKALDKKLAHDKEIDKSKNETNDH------------RNLY 532
S F L+ R L + A+ + A + K + ++H RNL+
Sbjct: 69 LSAKPENAHQFSLENRTLNITLAVSRTEAQNLRKRKHDEDASEHSAGIADAMKQSGRNLH 128
Query: 533 LAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEK 592
LA G+I G+ A G+S +D++KR L K KL PN+ +S RL + NLP +++
Sbjct: 129 LASVGIIRPGSSEAVGLSKEDLAKRDALLRDKKKKLIDPNYFISDVRLCLRNLPLHVSDD 188
Query: 593 GLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALR 652
LK C + + K I + + +++L+ G+ ++ S G FV F H+ AL L
Sbjct: 189 NLKSACSNYM----KKSTGRILECRIMRNLQPGR--QQYRSLGYGFVAFNNHEDALNVLH 242
Query: 653 VLNNNPS 659
LNNNP+
Sbjct: 243 GLNNNPN 249
>gi|156836003|ref|XP_001642245.1| hypothetical protein Kpol_193p1 [Vanderwaltozyma polyspora DSM
70294]
gi|156112721|gb|EDO14387.1| hypothetical protein Kpol_193p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 591
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 139/302 (46%), Gaps = 67/302 (22%)
Query: 418 TEGEDELQN------TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGF 471
T+ +D +Q +IF+ N+P+D E + + FS FG V +PV+ + T KGT F
Sbjct: 141 TQKQDRIQKNRRDDFSIFVRNVPYDATEESLAEHFSKFGPVKYALPVVDKETGLAKGTAF 200
Query: 472 LKFKTVEAATAAVSASKTTSGLGIFL----------KGRQLTVLKALDKKLAHD------ 515
+ FK + T V+ + + + +GR L+V L ++ A+
Sbjct: 201 VAFKDEKTYTFCVNNAPAAGATSLLIDDDVLPEYVYEGRVLSVSPTLQREEANKMAEHNA 260
Query: 516 ---KEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL-QSP 571
KE+ D RNLYL EG ++EG+ A +S DM R+ + ++ +L ++P
Sbjct: 261 SKRKEVFGKAPGERDKRNLYLLNEGKVVEGSKLASLLSTKDMEIREKSYNLRVEQLKKNP 320
Query: 572 NFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVV-------------------SRASKQKP- 611
+ H+S TRL I NLP++M +K LK L +V SR++K+K
Sbjct: 321 SLHLSMTRLAIRNLPRAMNDKSLKALGRKGIVQFATEVKDGERHPLSKEEISRSTKEKYK 380
Query: 612 ------------------VIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRV 653
V++Q K + +K + SRG F+E+ +H+ AL+ LR
Sbjct: 381 FMSEEEIQREKKKDSKRGVVRQAKVIMEVKGSTIGR---SRGYGFIEYRDHKSALMGLRW 437
Query: 654 LN 655
LN
Sbjct: 438 LN 439
>gi|440639411|gb|ELR09330.1| hypothetical protein GMDG_03896 [Geomyces destructans 20631-21]
Length = 839
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 137/298 (45%), Gaps = 66/298 (22%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV- 484
+T+F+ NLPF + E+K+ F FG V V+ + T RPKGTGF+ F VE A V
Sbjct: 365 STLFVRNLPFTARDPELKEHFMQFGAVRYARVVMDRATDRPKGTGFVCFYNVEDADNCVK 424
Query: 485 ----------SASKTTSGLGI----------------FLKGRQLTVLKALDKKLA---HD 515
+A+K T + + GR L V A++++ A +
Sbjct: 425 NAPRYQPTGANATKKTDASNVKHSILENESADSSGSYTIDGRVLQVSHAVEREQAVKLTE 484
Query: 516 KEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQ-SPNFH 574
+ I+ N D R+LYL EG + GT +S +++ R+ +++ +Q +P+ H
Sbjct: 485 QGINSRDNRDKDKRHLYLLSEGTVAAGTTLYNALSPSEITMREDSAKQRKKLIQGNPSLH 544
Query: 575 VSRTRLVIYNLPKSMTEKGLKKLCIDAVVS------------------------------ 604
+S TRL I NLP+S+T K LK L + VV
Sbjct: 545 LSLTRLSIRNLPRSITSKDLKALAREGVVGFAKDVKSGLRAQLSKEEEARGGEPMREAEK 604
Query: 605 -RASKQKPVIKQIKFLQSLKKG-KVDTKH---YSRGVAFVEFTEHQHALVALRVLNNN 657
R +K K ++KQ K + ++G KV + SRG F+E+ H+ AL+ LR LN +
Sbjct: 605 QRKAKGKGIVKQSKIVFEGREGAKVSEESGAGRSRGYGFIEYASHRWALMGLRWLNGH 662
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +R++P + + +FS + + + + +T SKG+ FV F DAE A ++F
Sbjct: 44 LFVRSLPATVTSDALTKLFSESYPLKHATVVLDPETKQSKGYGFVTFADAEDAERAKEEF 103
Query: 279 NGQKFGKRPIAVDWAVPKNIYSSGGAAAG 307
+G+ F R + V+ A P++ G AG
Sbjct: 104 HGKAFQGRKLKVEVAEPRHRDVDSGKGAG 132
>gi|348671204|gb|EGZ11025.1| hypothetical protein PHYSODRAFT_304700 [Phytophthora sojae]
Length = 987
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/284 (32%), Positives = 132/284 (46%), Gaps = 41/284 (14%)
Query: 421 EDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAA 480
E + T+FI NL F + ++ F FG V V + + KG GF++FK+ + A
Sbjct: 508 EAQRDRTLFIRNLSFQTSEDGLRAFFQTFGAVEYARVVYDKGSGLSKGVGFVRFKSADVA 567
Query: 481 TAAVSASK---------------TTSGLG------IFLKGRQLTVLKALDKKLA-HDKEI 518
+ + T S L + L GRQL + +A+ K A H +
Sbjct: 568 AEVLKRGEQPQLDDKKKQKENLFTLSALADGGDDALTLDGRQLILSRAVSKTDAEHLADS 627
Query: 519 DKSKNETNDHRNLYLAKEG-LILEGTPAAE-GVSDDDMSKRQMLHEKKMTKLQSPNFHVS 576
+ + D RN+YLA EG L + AE + D+ KR+ +K KLQ+P + VS
Sbjct: 628 NARERRRLDKRNMYLAYEGTLNVNKMADAELELPKMDIDKRRRAIREKKLKLQNPMYFVS 687
Query: 577 RTRLVIYNLPKSMTEKGLKKLCIDAVVS--RAS-------------KQKPVIK--QIKFL 619
RL + NL ++ ++ LKKL DA + RA K P +K K +
Sbjct: 688 PMRLSVRNLSTALDDRKLKKLFHDAATAGVRAGNVDRTEIKPELLPKGNPTVKVRMAKVV 747
Query: 620 QSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPSKLFY 663
+ ++ K + SRG FVEF+EH HAL ALRVLNNNP Y
Sbjct: 748 RDMESAKAGKEPRSRGYGFVEFSEHLHALAALRVLNNNPKYTSY 791
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 114/262 (43%), Gaps = 63/262 (24%)
Query: 122 RTVIIGGLLNADMAEE-VHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVLYT 180
++V+I GL AD+ ++ V + A +G V E++E+ A+ G + V +
Sbjct: 231 KSVLIFGL-GADVTQKHVLKKAKKVGAV---------EKVERKEEARTGKSY--ALVQFK 278
Query: 181 TVKSACASVALLHQKEIKGGTVWARQLGG-----------------EGSKTQKWKLIIRN 223
T K A +VA L KG + + + ++ + +LI+RN
Sbjct: 279 TTKDAALAVAKLDHHIFKGSVLQVKSAAKAVVADDKASAGKPGHPKQAAEAEGLRLIVRN 338
Query: 224 IPFKAKVNEIKDMFS---PVGLVWNVYIPHNTDT-----------------GLSKGFAFV 263
+ F+ +++ +F P+ V V +P D G S+GF FV
Sbjct: 339 LAFQTTDKDLEKLFEVHGPLFEVRVVRMPVEEDKKKSEEGADGESKAEPVLGRSRGFGFV 398
Query: 264 KFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIY----------SSGGAAAGVQNKGD 313
++ DA +A++K NG K R + VD+A+ KN Y + AA +++ D
Sbjct: 399 QYRDVADARAAVEKLNGTKLKGREMIVDFALSKNKYLEQQKKQEEEAIASAAPEGEDEDD 458
Query: 314 GNSDSGSDDDLGDDDAETASDD 335
++SG +D +D E A+DD
Sbjct: 459 EEANSGDED---EDQLEMATDD 477
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTG------LSKGFAFVKFTCKRDAE 272
+ +RN+PF E++ +FS +G V + + D G L++GFAFVKF + DA
Sbjct: 4 VFVRNLPFGVTQEELEHVFSEIGPVKKIDVI--KDKGKRKSEMLTRGFAFVKFAVESDAA 61
Query: 273 SAIQKFNGQKFGKRPIAVDWAVPK 296
A++K N F R + +D+A+ K
Sbjct: 62 VAVEKLNKTDFQGRKMLIDYAMEK 85
Score = 39.7 bits (91), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 11 RGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHR 49
RGF +V+FAV DA AVE N T GRK+ + +AM +
Sbjct: 47 RGFAFVKFAVESDAAVAVEKLNKTDFQGRKMLIDYAMEK 85
Score = 39.3 bits (90), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 11 RGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVTQEVQA 65
RGFG+VQ+ + DA AVE NGT + GR++ V A+ + +++ K +E A
Sbjct: 393 RGFGFVQYRDVADARAAVEKLNGTKLKGREMIVDFALSKNKYLEQQKKQEEEAIA 447
>gi|322695427|gb|EFY87235.1| RNA recognition motif containing protein [Metarhizium acridum CQMa
102]
Length = 725
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 137/285 (48%), Gaps = 55/285 (19%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKF----------K 475
+T+FI NLPF +E++K FS FG V V+ +VT++P GTGF+ F K
Sbjct: 326 STVFIRNLPFTTTDEQLKGFFSHFGAVRYARVVIDKVTEKPAGTGFVCFVKQSDAKLCIK 385
Query: 476 TVEAATAAVSASKTTSGL-------GIF-LKGRQLTVLKALDK-KLAHDKEIDKSKNETN 526
A+ + SK + L G + L+GR L V +A++K + A+ + +K
Sbjct: 386 EAPRPNASAAGSKPSLLLDENADPSGKYTLEGRLLQVAQAVNKAEAANLADNSLAKRREK 445
Query: 527 DHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQS-PNFHVSRTRLVIYNL 585
D R LYL EG I G+P + +S ++ RQ ++ +QS P+ H+S TRL + N+
Sbjct: 446 DKRRLYLLSEGAIGRGSPLFDVLSPSEIQMRQASAAQRKKLVQSNPSLHLSLTRLALRNI 505
Query: 586 PKSMTEKGLKKLCIDAVV-------------------------------SRASKQKPVIK 614
P+++ K LK+L AVV R K K +++
Sbjct: 506 PRNIGSKELKELARKAVVGFAVDVKEGLRQPLSKEENARDGKDAKEKERQRKLKGKGIVR 565
Query: 615 QIKFL-QSLKKGKVDTKH---YSRGVAFVEFTEHQHALVALRVLN 655
Q K + +S + KVD SRG F+E+T H AL+ LR LN
Sbjct: 566 QAKVVFESNQGSKVDEMSGAGKSRGYGFIEYTSHHWALMGLRYLN 610
>gi|393233178|gb|EJD40752.1| hypothetical protein AURDEDRAFT_127483 [Auricularia delicata
TFB-10046 SS5]
Length = 878
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 136/329 (41%), Gaps = 87/329 (26%)
Query: 412 PKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGF 471
PK Q D + T+F+ N+P+D +++++ F AFG + + + R +GTGF
Sbjct: 389 PKERAQLPQTD-VGTTVFVRNVPYDATDDDLRTLFRAFGPLRYARVTMDHDSGRSRGTGF 447
Query: 472 LKFKTVEAATAAVSASKTTS---GLG-----------------------------IFLKG 499
F E A A V ++ GLG + L G
Sbjct: 448 ACFWNKEDADAVVEHARVLREEIGLGDDAAAPRKNPFAMPTSILTPDPSSSLARSLVLHG 507
Query: 500 RQLTVLKALDKKLAHD-KEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQ 558
R L V +A+ ++ A KE + E D RNLYL +EG+I GTPAA + ++ KRQ
Sbjct: 508 RTLDVTRAVTREQAGKLKESGERAREKQDKRNLYLMREGVIFPGTPAAATLPPAELEKRQ 567
Query: 559 MLHEKKMTKLQS-PNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS------------- 604
+ + L+S P+ +VS+TRL + LP +E+ LK+L + AV +
Sbjct: 568 ASYNARRVLLRSNPSLYVSKTRLSVRQLPPWASERVLKRLALHAVRAFEDDVKAGTREGL 627
Query: 605 ----------------------------------RASKQKPVIKQIKFLQSLKKGKVDTK 630
A Q V++Q + L +L K
Sbjct: 628 AEDELHPPPEAEEDQDVRKELEKKSKGKGKGGRPTAVIQAKVVRQPERLDALS-----GK 682
Query: 631 HYSRGVAFVEFTEHQHALVALRVLNNNPS 659
SRG F++ H HAL LR NNNP+
Sbjct: 683 GRSRGYGFLQMASHAHALRVLRWANNNPA 711
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + N+P+ A +++ +FS VG V + ++ + +T +SKG +V F + DAE A+
Sbjct: 15 VFVSNLPYTATSVDLQTLFSDVGPVRSAFVVQDKETKISKGVGYVSFAIREDAERAMT-- 72
Query: 279 NGQKFGKRPIAVDWAVPKN 297
+ R + V W KN
Sbjct: 73 DTYDMDGRTLRVQWPSQKN 91
>gi|240279975|gb|EER43479.1| RNA recognition domain-containing protein-containing protein
[Ajellomyces capsulatus H143]
Length = 534
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 188/428 (43%), Gaps = 80/428 (18%)
Query: 212 SKTQKWKLIIRNIPFK-AKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRD 270
++ Q KLIIRN+P+ A+ +++ +F G V + IP GF FV ++
Sbjct: 143 TQVQPPKLIIRNLPWSIAEPDQLSSLFRSFGKVKHAVIPKRGTK--HSGFGFVVLRGWKN 200
Query: 271 AESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAE 330
AE A+ NG++ R +AVDWAV K+++ QN D D + G D+
Sbjct: 201 AEKALNAVNGKEVDGRTLAVDWAVEKSVWDE------FQNHTDDVIDGKGKEKEGPDN-- 252
Query: 331 TASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSD 390
D+ +EKED S D ++ ++ + S+SD ++G+ E+D+
Sbjct: 253 ----DNKLNEKEDESSTDD-----ELNGRLEDDEGEEDEDDISMSD----LEGD-EEDAG 298
Query: 391 KTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQ-NTIFICNLPFDLDNEEVKQRFSAF 449
K ++E E EDE +T+FI NLPF+ ++ + + F F
Sbjct: 299 KKIDE-----------------------EVEDERNASTVFIRNLPFNATDDSLYEHFVQF 335
Query: 450 GEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGL---------------- 493
G + V+ T RP+GT F+ F E A + + S + L
Sbjct: 336 GPLRYARVVVDAETDRPRGTAFVCFWKNEDAISCLRDSPKRTDLLRSEDSKPKMSTIKHS 395
Query: 494 ----------GIF-LKGRQLTVLKALDKKLAHDKEIDKSKNET---NDHRNLYLAKEGLI 539
G + + GR L + A+ K A E + S D R L+L EG I
Sbjct: 396 VLEDENKDPSGKYTMDGRVLQLSLAVSKSQAAKFEAEGSSRRQARDKDKRRLFLLSEGTI 455
Query: 540 LEGTPAAEGVSDDDMSKRQMLHEKKMTKLQS-PNFHVSRTRLVIYNLPKSMTEKGLKKLC 598
+ + +S +++ R+ +++ ++S P H+S TRL + N+P+++ K LK L
Sbjct: 456 PSNSSLYKQLSPSEIAMRETSAKQRQKLIKSNPMLHISLTRLSVRNIPRNIDSKALKALA 515
Query: 599 IDAVVSRA 606
+AVV A
Sbjct: 516 REAVVGFA 523
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 239 PVGLVWNVYIPHNT-----DTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWA 293
P L+ + + H T T SKG+ FV F DA A+++FNG F R + ++ A
Sbjct: 55 PAVLLAIIPLEHATVVLDPQTKQSKGYGFVTFADHEDAAKALEEFNGSDFDGRKLKIEVA 114
Query: 294 VPKN--IYSSGGAAAGV 308
P++ I +GG + +
Sbjct: 115 EPRHREIDENGGKSVSI 131
>gi|171686972|ref|XP_001908427.1| hypothetical protein [Podospora anserina S mat+]
gi|170943447|emb|CAP69100.1| unnamed protein product [Podospora anserina S mat+]
Length = 663
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 133/290 (45%), Gaps = 57/290 (19%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKF------------ 474
T+FI NLP+ +E++K F FG V V + T RP GTGF+ F
Sbjct: 348 TVFIRNLPYTATDEQLKAHFETFGAVRYARVVKERGTDRPAGTGFVCFFNHDDYVSCLKG 407
Query: 475 ----KTVEAATAAVSASKTTSGLGIF-LKGRQLTVLKALDK-KLAHDKEIDKSKNETNDH 528
A +V +T G + L GR L V A+DK + A +E+ SK + D
Sbjct: 408 APRRPAPTLAKHSVLQDETLDPEGTYTLDGRILQVAPAVDKSEAARLQEMSASKKD-KDK 466
Query: 529 RNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQS-PNFHVSRTRLVIYNLPK 587
R L+L +EG I +P + +SD ++ R+ +++ ++S P H+S TRL + N+P
Sbjct: 467 RRLFLLQEGQIPASSPVFKTLSDQEIKMREASAKQRKKLIESNPALHISLTRLAVRNIPA 526
Query: 588 SMTEKGLKKLCIDAVVS-------------------------------RASKQKPVIKQI 616
+M K LK L +AVV R K K V+KQ
Sbjct: 527 NMDSKALKALAREAVVGFAKDVKEGKRAPLSKEENLRGGEQDKEAERHRKEKGKGVVKQA 586
Query: 617 KF-LQSLKKGKVDTKHY-----SRGVAFVEFTEHQHALVALRVLNNNPSK 660
K ++++ K+D K SRG F+E+T H+ AL+ LR LN + K
Sbjct: 587 KIVFETVQGSKIDEKKAEGGGKSRGYGFIEYTSHRWALMGLRWLNGHAMK 636
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query: 218 KLIIRNIPFKAKVNE-IKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
KLIIRN+P+ K +E + +F P G + +P N+ LS GF FV +++AE A++
Sbjct: 151 KLIIRNLPWSIKSSEQLAKLFQPFGKIKFADLP-NSKGKLS-GFGFVTLRGRKNAEKALE 208
Query: 277 KFNGQKFGKRPIAVDWAVPKNIY 299
NG++ R +AVDWAV K +
Sbjct: 209 AINGKEIDGRTVAVDWAVDKQTW 231
>gi|301107420|ref|XP_002902792.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262097910|gb|EEY55962.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1005
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 132/290 (45%), Gaps = 47/290 (16%)
Query: 421 EDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAA 480
E + T+FI NL F + +++ F AFG V V + + KG GF++FK+ + A
Sbjct: 521 EAQRDRTLFIRNLSFQTSEDGLREFFQAFGAVEYARVVYEKGSGLSKGVGFVRFKSADVA 580
Query: 481 TAAVSASK---------------------TTSGLG------IFLKGRQLTVLKALDKKLA 513
+ + T S L + L GRQL + +A+ K A
Sbjct: 581 AEVLKRGEQPQGDEKKKHKKDKKKKDKVFTLSALAAGGDDALTLDGRQLLLSRAVSKTDA 640
Query: 514 -HDKEIDKSKNETNDHRNLYLAKEG-LILEGTPAAE-GVSDDDMSKRQMLHEKKMTKLQS 570
H + + + D RNLYLA EG L + AE + D+ KR+ +K KLQ+
Sbjct: 641 EHLADSNARERRRLDKRNLYLAYEGTLNVNKMADAELELPKMDIDKRRRAIREKKLKLQN 700
Query: 571 PNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAV--------VSRAS-------KQKPVIK- 614
P + VS RL + NL ++ ++ LKKL DA V R K P +K
Sbjct: 701 PMYFVSPMRLSVRNLSTALDDRKLKKLFHDAASAGVCAGNVDRTEIKPELLPKGNPPVKV 760
Query: 615 -QIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPSKLFY 663
K ++ ++ K SRG FVEF+EH HAL ALR+LNNNP Y
Sbjct: 761 RMAKVVRDMESAKAGKDPRSRGYGFVEFSEHLHALAALRILNNNPKYTSY 810
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTG------LSKGFAFVKFTCKRDAE 272
+ +RN+PF E++ +FS +G V + + D G L++GFAFVKF + DA
Sbjct: 4 VFVRNLPFGVTQEELEHVFSEIGPVRKIDVIK--DKGKRKSEMLTRGFAFVKFAVESDAA 61
Query: 273 SAIQKFNGQKFGKRPIAV 290
A++K N F R + +
Sbjct: 62 VAVEKLNKTDFQGRKMLI 79
>gi|403417653|emb|CCM04353.1| predicted protein [Fibroporia radiculosa]
Length = 941
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 135/318 (42%), Gaps = 81/318 (25%)
Query: 423 ELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATA 482
E T+F+ N+PF+ +E++ F AFG + + R +GTGF+ F A
Sbjct: 477 ETGTTLFVRNVPFEATEDELRTLFRAFGPLRYARITMDHEIGRSRGTGFVCFWNKADADK 536
Query: 483 AVSASK------------------------------TTSGLGIFLKGRQLTVLKALDKKL 512
A+ S+ + + L+GR L V++A+ +
Sbjct: 537 AIEQSELLRAETVTNKVAVHKKNPFKLPSLLTPDPSASVAQNLVLQGRTLDVIRAVTRDE 596
Query: 513 AHD-KEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQS- 570
A KE + + E D RNLYL +EG+IL +PAAE ++ ++ KR + T L+S
Sbjct: 597 AGKLKEEGERQREKADKRNLYLLREGIILPNSPAAETMNPAEVEKRTQSFNARRTLLRSN 656
Query: 571 PNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAV---------------------------- 602
P+ +VSRTRL I LP +TE+ +K+L I AV
Sbjct: 657 PSLYVSRTRLSIRQLPVFVTERIVKRLAIHAVRKFEKEVKEGIRQRLSEDELLEARVAED 716
Query: 603 --------VSRASKQKPV------------IKQIKFL-QSLKKGKVDTKHYSRGVAFVEF 641
V +KP+ +KQ K + QS + V K S+G F+E
Sbjct: 717 EDTPAKTEVDEGGAKKPLREQHKKGGRPTGVKQAKIVRQSDRVDAVTGKGRSKGYGFLEM 776
Query: 642 TEHQHALVALRVLNNNPS 659
T H AL LR NNNP+
Sbjct: 777 TSHADALRVLRWANNNPA 794
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 124/317 (39%), Gaps = 91/317 (28%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEM--KNGTSVGGRKIGVKHAMHRASLEQRRSK 58
+V + S +G GYV FA+ EDA A+E + G ++ GR + ++ +++
Sbjct: 55 VVLDQASGISKGVGYVSFAIKEDAQMALEKVDREGIALDGRSLRLQWPNNKSK------- 107
Query: 59 VTQEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQ 118
+K+ NK + + + K S + L I
Sbjct: 108 ----------DKSSQNKVKITRPEDLDARKAKPSRPSSSSAPRDPLAI------------ 145
Query: 119 RVARTVIIGGL-LNAD---MAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDA 174
RTV+I GL AD + +++ +L G+ C +D+
Sbjct: 146 ---RTVVITGLPRTADSKTIWKKIRKLEGAEKVDC----------------------VDS 180
Query: 175 SAV--LYTTVKSACASVALLHQKEIKGGTVWA---RQLGGEGSKTQKW------------ 217
SA L+ T +A + LH KG + A ++L G + +K
Sbjct: 181 SAAHALFVTPATAMEAANKLHAHVFKGSLLSATLKKRLDGLANAPKKLQAAKEKGPAPNR 240
Query: 218 --KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIP------------HNTDTGLSKGFAFV 263
+LI+RN+PF +++ +F P G ++++ IP + KGFAFV
Sbjct: 241 ASRLIVRNLPFDITEQDLRAVFLPYGPIYSIDIPSVEAPKPEEEDVRPSAAPRKKGFAFV 300
Query: 264 KFTCKRDAESAIQKFNG 280
+ DAE A+++ NG
Sbjct: 301 WMLSRMDAERAMEQCNG 317
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
L +RN+PF+A +E++ +F G + I + + G S+G FV F K DA+ AI++
Sbjct: 482 LFVRNVPFEATEDELRTLFRAFGPLRYARITMDHEIGRSRGTGFVCFWNKADADKAIEQ 540
Score = 45.4 bits (106), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+P+ A +++ +FS V + ++ + +G+SKG +V F K DA+ A++K
Sbjct: 26 LFVSNLPYSATSVDLQTLFSDFAPVRSAFVVLDQASGISKGVGYVSFAIKEDAQMALEKV 85
Query: 279 N--GQKFGKRPIAVDWAVPKN 297
+ G R + + W P N
Sbjct: 86 DREGIALDGRSLRLQW--PNN 104
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
+T+F+ NLP+ + +++ FS F V S VL Q + KG G++ F E A A+
Sbjct: 24 STLFVSNLPYSATSVDLQTLFSDFAPVRSAFVVLDQASGISKGVGYVSFAIKEDAQMAL- 82
Query: 486 ASKTTSGLGIFLKGRQLTV 504
+ GI L GR L +
Sbjct: 83 --EKVDREGIALDGRSLRL 99
>gi|367050962|ref|XP_003655860.1| hypothetical protein THITE_2120031 [Thielavia terrestris NRRL 8126]
gi|347003124|gb|AEO69524.1| hypothetical protein THITE_2120031 [Thielavia terrestris NRRL 8126]
Length = 795
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 129/286 (45%), Gaps = 55/286 (19%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T+FI NLP+ +E +K FS FG V V+ + T +P GTGF+ F ++ A +
Sbjct: 372 TLFIRNLPYTTTDETLKAHFSRFGRVRYARVVMDRATDKPAGTGFVCFFNLDDCKACLKG 431
Query: 487 SKTTSGLGIF------------------LKGRQLTVLKALDK-KLAHDKEIDKSKNETND 527
+ + L GR L V +A+ K + A E SK + D
Sbjct: 432 APRHRPVATLAKHSVLQDEMADPEGNYTLDGRILQVAQAVSKDEAARLAEEAPSKGKKKD 491
Query: 528 HRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQS-PNFHVSRTRLVIYNLP 586
R L+L EG I + +P ++ ++ R+ +++ +QS P+ H+S TRL I N+P
Sbjct: 492 KRRLFLLSEGAIPKNSPIYAKLTPAEIKMREASAKQRKKLIQSNPSLHLSLTRLAIRNIP 551
Query: 587 KSMTEKGLKKLCIDAVVS-------------------------------RASKQKPVIKQ 615
++T K LK L AVV R K K V++Q
Sbjct: 552 GNLTSKDLKALARQAVVGFAKDVKEGRRQPLSKEEKTRGGEQDKEAERRRKQKGKGVVRQ 611
Query: 616 IKFLQSLKKG-KVDTKH---YSRGVAFVEFTEHQHALVALRVLNNN 657
K + ++G KVD K SRG FVE+T H+ AL+ LR LN +
Sbjct: 612 AKIVFETREGSKVDEKTGAGKSRGYGFVEYTSHRWALMGLRWLNGH 657
>gi|401885432|gb|EJT49550.1| hypothetical protein A1Q1_01355 [Trichosporon asahii var. asahii
CBS 2479]
Length = 959
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 131/298 (43%), Gaps = 68/298 (22%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T+F+ NLPF+ E+ Q F AFG + + + T R +GTGF+ F E A +A+
Sbjct: 460 TVFVRNLPFEATEGELGQLFRAFGPIRYARITMDRATGRSRGTGFVCFWNPEHADSAIKE 519
Query: 487 SKTTS--------GLG-----------------------IFLKGRQLTVLKALDKKLAHD 515
++ + LG + L GR L V +A+ ++ A +
Sbjct: 520 AERVARETGANAMPLGEKKNPFALPSVLQAGPSAQLASKLVLHGRTLAVSRAVTREQASN 579
Query: 516 -KEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQS-PNF 573
KE + E D RN YL +EG++ +PAA + ++ +RQ + L+S P
Sbjct: 580 LKEDAERAREKGDKRNTYLMREGVVFPNSPAAASMPPAEVERRQAAFGARKALLRSNPAL 639
Query: 574 HVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS----------------------------- 604
++S+TRL + +P +T++GLK+L I AV +
Sbjct: 640 YISKTRLSVRQIPLFVTDRGLKRLAIHAVRAFDDEVKAGVREGLARHEEADDTLSAALEG 699
Query: 605 ----RASKQKPVIKQIKFLQSLKKG-KVDTKHYSRGVAFVEFTEHQHALVALRVLNNN 657
R +Q V+ Q K ++S +K V SRG F+E H+ AL LR NNN
Sbjct: 700 RSKKRGERQTAVV-QSKIVRSAEKPDPVTGSGRSRGYGFLELRSHKDALKVLRWANNN 756
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 123/286 (43%), Gaps = 32/286 (11%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + ++P+ A ++ FS +G + + ++ + +TG SKG +V + + DAE A+ +
Sbjct: 39 LFVSSLPYNATSTDLVTHFSFIGPIRHGFVATDKETGKSKGVGYVTYAMREDAERALAEL 98
Query: 279 NGQKFGK--RPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDDS 336
+G FG R I V WA K S GAA G + + + A +DDS
Sbjct: 99 DGGAFGDKGRKIRVSWADKK----SRGAAPGREM---------AAVERPKKTARVTADDS 145
Query: 337 NSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSL------SDDSALVKGNKEQDSD 390
SS+ + + D+ + VL K + L D+A V D+
Sbjct: 146 ASSDPNAIRTLIVTGLPGDLTKAVLWKKIRKVNAKAELEYPIEGEADTANVVFPTHGDAV 205
Query: 391 KTVNE-SAKVSDVSKLNSSKSKPKSLKQTEGEDELQNT--IFICNLPFDLDNEEVKQRFS 447
K V++ V S L++ K ++GE + + + + NL ++ +++ F
Sbjct: 206 KVVSKLHGHVYKGSLLSAVLKKRAEKLSSKGEGAVSHAGRLIVRNLAWETTEADLRATFL 265
Query: 448 AFGEVVSF-VPV----LHQVTKRPKGTGFLKF---KTVEAATAAVS 485
FG +VS +P L R +G F+ F K E A AA++
Sbjct: 266 PFGPIVSIDLPTAPSKLPNAPPRARGFAFVWFMVKKDAERAMAAIN 311
>gi|406695116|gb|EKC98431.1| hypothetical protein A1Q2_07445 [Trichosporon asahii var. asahii
CBS 8904]
Length = 960
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 131/298 (43%), Gaps = 68/298 (22%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T+F+ NLPF+ E+ Q F AFG + + + T R +GTGF+ F E A +A+
Sbjct: 461 TVFVRNLPFEATEGELGQLFRAFGPIRYARITMDRATGRSRGTGFVCFWNPEHADSAIKE 520
Query: 487 SKTTS--------GLG-----------------------IFLKGRQLTVLKALDKKLAHD 515
++ + LG + L GR L V +A+ ++ A +
Sbjct: 521 AERVARETGANAMPLGEKKNPFALPSVLQADPSAQLASKLVLHGRTLAVSRAVTREQASN 580
Query: 516 -KEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQS-PNF 573
KE + E D RN YL +EG++ +PAA + ++ +RQ + L+S P
Sbjct: 581 LKEDAERAREKGDKRNTYLMREGVVFPNSPAAASMPPAEVERRQAAFGARKALLRSNPAL 640
Query: 574 HVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS----------------------------- 604
++S+TRL + +P +T++GLK+L I AV +
Sbjct: 641 YISKTRLSVRQIPLFVTDRGLKRLAIHAVRAFDDEVKAGVREGLARHEEADDTLSAALEG 700
Query: 605 ----RASKQKPVIKQIKFLQSLKKG-KVDTKHYSRGVAFVEFTEHQHALVALRVLNNN 657
R +Q V+ Q K ++S +K V SRG F+E H+ AL LR NNN
Sbjct: 701 RSKKRGERQTAVV-QSKIVRSAEKPDPVTGSGRSRGYGFLELRSHKDALKVLRWANNN 757
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 122/286 (42%), Gaps = 32/286 (11%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + ++P+ A ++ FS +G + + ++ + +TG SKG +V + + DAE A+ +
Sbjct: 39 LFVSSLPYNATSTDLVTHFSFIGPIRHGFVATDKETGKSKGVGYVTYAMREDAERALAEL 98
Query: 279 NGQKFGK--RPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDDS 336
+G FG R I V WA K S GAA G + + + A +DDS
Sbjct: 99 DGGAFGDKGRKIRVSWADKK----SRGAAPGREM---------AAVERPKKTARVTADDS 145
Query: 337 NSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSL------SDDSALVKGNKEQDSD 390
SS+ + + D+ + VL K + L D+A V D+
Sbjct: 146 ASSDPNAIRTLIVTGLPGDLTKAVLWKKIRKVNAKAELEYPIEGEADTANVVFPTHGDAV 205
Query: 391 KTVNE-SAKVSDVSKLNSSKSKPKSLKQTEGEDELQNT--IFICNLPFDLDNEEVKQRFS 447
K V++ V S L++ K ++GE + + + NL ++ +++ F
Sbjct: 206 KAVSKLHGHVYKGSLLSAVLKKRAEKLSSKGEGAFSHAGRLIVRNLAWETTEADLRATFL 265
Query: 448 AFGEVVSF-VPV----LHQVTKRPKGTGFLKF---KTVEAATAAVS 485
FG +VS +P L R +G F+ F K E A AA++
Sbjct: 266 PFGPIVSIDLPTAPSKLPNAPPRARGFAFVWFMVKKDAERAMAAIN 311
>gi|399218801|emb|CCF75688.1| unnamed protein product [Babesia microti strain RI]
Length = 765
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 157/597 (26%), Positives = 245/597 (41%), Gaps = 129/597 (21%)
Query: 120 VARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVLY 179
V + II G + E+V G+V S+ +P L + G K
Sbjct: 205 VKNSFIIKGYPSQTTEEQVR------GSVTSILNGVP------FTLVRVGDKWRFVFENL 252
Query: 180 TTVKSACASVALLHQKEIKGGTVWAR----QLGGEGSKTQKWKLIIRNIPFKAKVNEIKD 235
+T SA ++ + K GGTV ++ + ++ ++N+PF +E+
Sbjct: 253 STCLSAATKLSSVRVKVPNGGTVIIHSVLPKIAINNKSAKVGRIFVKNLPFNITSDELAS 312
Query: 236 MFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVP 295
F+ + V+ HN +T + KGFAFV+FT + A A+ K NG R + + AV
Sbjct: 313 KFTKIDPNCTVHFTHNENTCV-KGFAFVQFTKIKLALKAL-KLNGTTIKGRKVEIHLAVS 370
Query: 296 KNIYSSGGAAAGVQNKGD-------------GNSDSGSDDDLGD--------DDAETASD 334
K ++S N D G D + D +D
Sbjct: 371 KEYFTSDSDKNNANNLSDECGDDIMDIDDSSDIEKHGVDKFVTDSVACNNDTNDYSYHVK 430
Query: 335 DSNSSEKEDLP--SNADFDEEVDIARK----VLNKLTSTTGSLPSLSDDSALVKGNKEQD 388
D+ + EDLP +N + + A+ NK+T T L L SA + K
Sbjct: 431 DAEMEDLEDLPKQNNKNIVNVIKSAKYGDAISKNKITKVT--LKQLKMRSAEITNGKPSS 488
Query: 389 SDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSA 448
S T+N SDV+ EG+ T F+ N+PF+ E+++ F
Sbjct: 489 S--TIN-----SDVN---------------EGK-----TAFVQNVPFEATQEQLESIFRV 521
Query: 449 FGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTT------------------ 490
+GE + + ++ R KGT F+KF T E+ +S+ T
Sbjct: 522 YGE-LEYAKLVKDPAGRNKGTAFVKFMTKESLDNLLSSEANTKFEIGEYLIGDRLDSGER 580
Query: 491 --SGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEG 548
LGI L GR+L +++A+ + A + E S N D R LYL KE L +G
Sbjct: 581 SAENLGIALLGRKLRIVRAVTRDEAKELE---STNVKVDRRRLYLLKESL--------KG 629
Query: 549 VSDDDMSKRQMLHEKKM--TKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRA 606
+S++ +R +L + K ++ +PN VS R+ I NLP +T++ L+
Sbjct: 630 ISEE---QRGLLTKGKNRENRIDNPNTFVSDKRICIRNLPIYLTKQELR----------- 675
Query: 607 SKQKPVIKQIKFLQSL--KKGKV---DTKHYSRG--VAFVEFTEHQHALVALRVLNN 656
K K +K I +Q L KK KV + K RG FVEF A +AL+ LNN
Sbjct: 676 DKLKESVKGIGKIQLLADKKRKVANLNGKRIKRGKRFGFVEFKTRGQAKLALKFLNN 732
>gi|320582907|gb|EFW97124.1| RNA recognition motif-containing protein [Ogataea parapolymorpha
DL-1]
Length = 712
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 134/290 (46%), Gaps = 65/290 (22%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFK----------- 475
+IF+ N+P+D E +++ FS FG + +PV+ + T+ KG+ F+ F+
Sbjct: 292 SIFVRNVPYDATRESLEEHFSKFGPIKYALPVMDKDTQLAKGSAFVAFRREEDYEECLLN 351
Query: 476 TVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDK----------KLAHDKEIDKSKNET 525
E ++ S L ++ +GR L + +D+ LA + + + E
Sbjct: 352 APEVNPNSMLIPDDVSPLYVY-EGRVLQITATVDRDSAARMAERNALARKELLGRVPTE- 409
Query: 526 NDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL-QSPNFHVSRTRLVIYN 584
D RNL+L EG I G+ A +S D+ R+ + ++ +L ++P+ H+S TRL I N
Sbjct: 410 KDKRNLFLLNEGRITSGSRLASLISKTDLDVREKSYNLRVQQLNKNPSLHLSLTRLAIRN 469
Query: 585 LPKSMTEKGLKKLCIDAVVSRAS------------------------------------- 607
LP++M EK LK L A+V A+
Sbjct: 470 LPRAMNEKALKALGRKAIVQFAAEVKEGKRQPLNKEELARSQRHKEFIEEKLGVKPEDKK 529
Query: 608 --KQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLN 655
KQ V+KQ K + +K V + SRG F+EF +H+HAL+ALR LN
Sbjct: 530 RKKQTGVVKQAKIINEVKGSGVLGR--SRGYGFLEFRDHKHALMALRWLN 577
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 218 KLIIRNIPFKAK-VNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
KLI+RN+P+ K NE+ +F G V +IP D +S GF FV AE A++
Sbjct: 125 KLIVRNLPWSVKDPNELVKVFLKFGKVKEAHIPKKKDGKMS-GFGFVTMMKHAAAEKAVK 183
Query: 277 KFNGQKFGKRPIAVDWAVPKNIY 299
+ G K R +AVD+A+ K+ +
Sbjct: 184 ETVGLKLQGREVAVDFAIDKSKW 206
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +++IP +A E+ + FS V + I +T+ G S+GF FV F DA SA+++
Sbjct: 19 LFVQSIPVEATKEELNEFFSQYAPVRHSVIVTDTE-GKSRGFGFVSFVTDEDALSALKET 77
Query: 279 NGQKFGKRPIAVDWA 293
KF + + V A
Sbjct: 78 KKAKFKNKLLRVSIA 92
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 212 SKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDA 271
+K + + + +RN+P+ A +++ FS G + + DT L+KG AFV F + D
Sbjct: 286 NKQENFSIFVRNVPYDATRESLEEHFSKFGPIKYALPVMDKDTQLAKGSAFVAFRREEDY 345
Query: 272 ESAI 275
E +
Sbjct: 346 EECL 349
>gi|407410230|gb|EKF32748.1| RNA-binding protein, putative [Trypanosoma cruzi marinkellei]
Length = 476
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 134/287 (46%), Gaps = 49/287 (17%)
Query: 422 DELQNTIFICNLPFDLDNEEVKQRF-SAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAA 480
D L+ +F+ LP D EE+ + F S FG+V + V ++ TK GTGF+ +VE A
Sbjct: 108 DPLETQLFLKRLPLDTSEEELMKFFESRFGKVRRVLLVRNRATKTLAGTGFVHCGSVELA 167
Query: 481 TAAVS-ASKTTSGLGI-----------------------------------FLKGRQ--L 502
A K L FL R+
Sbjct: 168 DKIFEHAQKNARELAAADREEWREKTTDLSHCQAKRMRFKLRTDACMFRDPFLNIRETRF 227
Query: 503 TVLKALDK------KLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSK 556
TV + L + A K+ ++K +D R+LYL +EGLIL TPAA G+ ++
Sbjct: 228 TVHRVLSRTDSQEASAALQKKQKRTKVAADDPRHLYLLREGLILPDTPAARGLHPQYLAM 287
Query: 557 RQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQI 616
Q +E + +L++ N VS TRL + NLP++M+EK ++ + V S + K + +
Sbjct: 288 IQQDYEARKNQLRNSNLFVSTTRLNVRNLPRTMSEKEVRAIFAAPVRSFLKENKEHMDKD 347
Query: 617 KF--LQSLKKGKV--DTKHYSRGVAFVEFTEHQHALVALRVLNNNPS 659
K+ +K K+ D+ SRG AF+EF H AL ALR +NNNP+
Sbjct: 348 KWGKYGPIKNVKLVKDSAGTSRGYAFIEFVNHPIALHALRTINNNPT 394
>gi|365987071|ref|XP_003670367.1| hypothetical protein NDAI_0E03070 [Naumovozyma dairenensis CBS 421]
gi|343769137|emb|CCD25124.1| hypothetical protein NDAI_0E03070 [Naumovozyma dairenensis CBS 421]
Length = 701
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 129/287 (44%), Gaps = 61/287 (21%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
+IF+ N+P+D E + FS FG V +PV+ + T KGT F+ FK +
Sbjct: 303 SIFVRNVPYDATEESLAAHFSKFGLVKYALPVIDRATGLAKGTAFVAFKDAMTYKYCIDN 362
Query: 487 SKTTSGLGIFL----------KGRQLTVLKAL---------DKKLAHDKEIDKSKNETND 527
+ + + +GR L++ L +K KEI D
Sbjct: 363 APKAGATSLLIGDDVLPEYVYEGRVLSISPTLVREDADRMAEKNAEKRKEILGKAPGERD 422
Query: 528 HRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL-QSPNFHVSRTRLVIYNLP 586
RNLYL EG I+EG+ A +S DM R+ ++ ++ +L + P+ ++S TRL I NLP
Sbjct: 423 KRNLYLLNEGKIVEGSKMASLLSAKDMEIREKSYKLRVEQLKKDPSLYLSMTRLAIRNLP 482
Query: 587 KSMTEKGLKKLCIDAVVS-------------------RASKQK-----P----------- 611
++MT+K LK L AVV R++K+K P
Sbjct: 483 RAMTDKALKALGRKAVVEFATQVRNGERHPLSKEELDRSTKEKYRYMSPDEIERQDKKDK 542
Query: 612 ---VIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLN 655
++KQ K + +K + SRG F+E+ +H+ AL+ LR +N
Sbjct: 543 KSGLVKQAKIIMEVKGS---SAGRSRGYGFIEYKDHRSALMGLRWMN 586
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 63/126 (50%), Gaps = 8/126 (6%)
Query: 216 KWKLIIRNIPFKAKVNE-IKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESA 274
K KLIIRN+P+ + E +K +F G V IP D L GFAFV + A
Sbjct: 148 KPKLIIRNMPWSCRDPEKLKKVFGRFGNVVEATIPRKRDGKLC-GFAFVTMKKLSNCHLA 206
Query: 275 IQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASD 334
++ K RP+AVD+AV KN + G +NK +S + D D+D + +S+
Sbjct: 207 LENTKDLKIDGRPVAVDFAVQKNRWED--YKKGHENK----EESKVNADREDEDMDVSSE 260
Query: 335 DSNSSE 340
+ ++E
Sbjct: 261 EPANNE 266
Score = 39.7 bits (91), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 29/162 (17%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T+F+ ++P D+ +EE+ FS F V V+ V K+ +G GF+ F + A+
Sbjct: 27 TLFVRSIPMDVTDEELTDYFSNFAPTKHAV-VVKDVNKKSRGFGFVSFAVEDDTKEALKK 85
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
++ T LKG L V D + ++ +D +N EG + T A
Sbjct: 86 ARQTK-----LKGHLLRV----------DIAKRRDRSSKSDDKN-----EGKVKTDTIAV 125
Query: 547 EGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKS 588
DD+ + + + E+ + K + +L+I N+P S
Sbjct: 126 GTRGDDNGDEPEEVDEESLLK--------GKPKLIIRNMPWS 159
>gi|254570621|ref|XP_002492420.1| Nucleolar protein [Komagataella pastoris GS115]
gi|238032218|emb|CAY70207.1| Nucleolar protein [Komagataella pastoris GS115]
gi|328353565|emb|CCA39963.1| Nucleolar protein 4 [Komagataella pastoris CBS 7435]
Length = 653
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 142/304 (46%), Gaps = 69/304 (22%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFK-TVEAATAAVSA 486
IFI NLP+D E +++ F FG + +PV+ T + KGTGF+ FK + + ++A
Sbjct: 256 IFIRNLPYDASEETLQEHFEKFGPIRYALPVVDHNTGQAKGTGFVAFKNSQDYEDCLLNA 315
Query: 487 SKTTSGLGIF---------LKGRQLTVLKALDKKLAHD--KEIDKSKNET-----NDHRN 530
K TS + +GR L++ A+D+ A + +K + E D RN
Sbjct: 316 PKPTSNSVLLPDEVSPLYVYQGRVLSIAPAVDRDSAGRLMERNEKKRQEALGKGEKDKRN 375
Query: 531 LYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL-QSPNFHVSRTRLVIYNLPKSM 589
+YL EG I E + A ++ D+ R+ ++ ++ +L ++P H+S TRL I NLP++M
Sbjct: 376 IYLLHEGRISENSVLASLLTPADLKAREESYKLRVQQLNKNPTLHLSLTRLAIRNLPRAM 435
Query: 590 TEKGLKKLCIDAVVS-----RASKQKPVIKQ-------IKF------LQSL--------- 622
TEK LK L A+V R K+ P K+ +F Q L
Sbjct: 436 TEKSLKALGRKAIVEFATELRQGKRNPFSKEELVRSSKHRFEMEGGNFQELLDEATTGHA 495
Query: 623 ---------KKGKV------------DTKHYSRGVAFVEFTEHQHALVALRVLNNN---P 658
KKG V + SRG F+E+ +H+HAL+ LR LN + P
Sbjct: 496 SVTLQKKNKKKGVVLQSKIITEVKGTGEQGRSRGYGFLEYRDHKHALMGLRWLNAHLVTP 555
Query: 659 SKLF 662
++F
Sbjct: 556 EEIF 559
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 213 KTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGL-SKGFAFVKFTCKRDA 271
K K L +R IP A ++ D FS V + I TD SKGF FV FT + D+
Sbjct: 9 KVDKNTLFVRGIPTNASKEQLSDFFSQFAPVKHAIIV--TDKAEDSKGFGFVSFTSEDDS 66
Query: 272 ESAIQKFNGQKFGKRPIAVDWA 293
A+ +KF K + VD A
Sbjct: 67 VLALAGAKAKKFNKVLLKVDIA 88
>gi|395331273|gb|EJF63654.1| RNA-binding domain-containing protein [Dichomitus squalens LYAD-421
SS1]
Length = 980
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 144/339 (42%), Gaps = 91/339 (26%)
Query: 413 KSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFL 472
K K T E+ T+F+ N+PF+ ++E++ F AFG + + T R +GTGF
Sbjct: 476 KPAKPTLPAPEVGTTVFVRNVPFEATDDELRTLFRAFGPLRYARITMDHATGRSRGTGFA 535
Query: 473 KFKTVEAATAAVSAS---------------------KTTSGL----------GIFLKGRQ 501
F E A A+ S K S L + L GR
Sbjct: 536 CFWNKEDADKAIEQSDILRAETVGNEPAVTTKKNPFKLPSLLTPDPSASIARNLVLHGRT 595
Query: 502 LTVLKALDKKLAHD-KEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKR-QM 559
L V +A+ + A KE + + E D RNLYL +EG+IL +PAAE + ++ KR Q
Sbjct: 596 LDVSRAVTRDEASKLKEAGERQREKADKRNLYLLREGIILPNSPAAELLPPAEVEKRTQS 655
Query: 560 LHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCI-------------------- 599
+ ++ +P+ VSRTRL + +P ++E+ LK+L I
Sbjct: 656 FNARRALLRSNPSLFVSRTRLSVRQIPLFVSERMLKRLAIHSIRAFEKEAKEGKRGPLSA 715
Query: 600 DAVVSRA-----------------SKQKPV--------------IKQIKFLQSLKKGKVD 628
D ++ RA S KP +KQ K ++ ++ +VD
Sbjct: 716 DELIERALTEDADDEDVKMEAEDDSSSKPKKGKHDVKGKGRNTGVKQAKIVR--QQDRVD 773
Query: 629 T---KHYSRGVAFVEFTEHQHALVALRVLNNNP--SKLF 662
K SRG F+E T+H AL LR NNNP +LF
Sbjct: 774 AVTGKGRSRGYGFLELTKHADALRVLRWANNNPVVGRLF 812
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+P+ A ++K +FS + V ++ TG+SKG +V F + DA AI K
Sbjct: 26 LFVSNLPYTATSTDLKTLFSDIAPVRTAFVVLEHGTGISKGVGYVSFAIREDATMAIDKI 85
Query: 279 N--GQKFGKRPIAVDWAVPKN 297
+ G R + V WA KN
Sbjct: 86 SKEGITLDGRSLRVQWAGSKN 106
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
+T+F+ NLP+ + ++K FS V + VL T KG G++ F E AT A+
Sbjct: 24 STLFVSNLPYTATSTDLKTLFSDIAPVRTAFVVLEHGTGISKGVGYVSFAIREDATMAID 83
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHDK 516
S GI L GR L V A K H++
Sbjct: 84 ---KISKEGITLDGRSLRVQWAGSKNKDHEQ 111
>gi|407848089|gb|EKG03571.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 487
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 134/287 (46%), Gaps = 49/287 (17%)
Query: 422 DELQNTIFICNLPFDLDNEEVKQRF-SAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAA 480
D L+ +F+ LP D EE+ + F S FG+V + V ++ TK GTGF+ +VE A
Sbjct: 108 DPLETQLFLKRLPLDTSEEEMMKFFESRFGKVRRVLLVRNRATKTLAGTGFVHCGSVELA 167
Query: 481 TAAVS-ASKTTSGLGI-----------------------------------FLKGRQ--L 502
A + T L FL R+
Sbjct: 168 DKIFEHAQQNTRELAAANREEWQEKTTDLSHCQAKRMRFKLRTDACMFRDPFLNIRETRF 227
Query: 503 TVLKALDK------KLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSK 556
TV + L + A K+ ++K +D R+LYL +EGLIL TPAA G+ ++
Sbjct: 228 TVHRVLSRTDSQEASAALQKKKKRTKVAADDPRHLYLVREGLILPDTPAARGLHPQYLTM 287
Query: 557 RQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQI 616
Q +E + +L++ N VS TRL + NLP++M EK ++ + V S + K + +
Sbjct: 288 IQQDYEARKDQLRNSNLFVSTTRLNVRNLPRTMLEKEVRAIFAAPVRSFLKENKEHMDKD 347
Query: 617 KF--LQSLKKGKV--DTKHYSRGVAFVEFTEHQHALVALRVLNNNPS 659
K+ +K K+ D+ SRG AF+EF H AL ALR +NNNP+
Sbjct: 348 KWGKYGPIKNVKLIKDSAGTSRGYAFIEFVNHPIALHALRTINNNPT 394
>gi|408391758|gb|EKJ71126.1| hypothetical protein FPSE_08632 [Fusarium pseudograminearum CS3096]
Length = 770
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 137/284 (48%), Gaps = 54/284 (19%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAA----- 480
+T+F+ NLPF +E++K F FG++ V+ +VT++P GTGF+ F + A
Sbjct: 339 STVFVRNLPFTTTDEQLKGFFGHFGKIRYARVVMDKVTEKPAGTGFVCFIDADEAKSCIK 398
Query: 481 ----TAAVSASKTTSGL--------GIF-LKGRQLTVLKALDKKLAHD-KEIDKSKNETN 526
T A +A+ TS L G + L GR L+V +A++K+ A E +K
Sbjct: 399 GAPRTQAPAATAKTSILQDESADPDGKYTLDGRLLSVTQAVNKQEATSLAENSLAKRNEK 458
Query: 527 DHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQ-SPNFHVSRTRLVIYNL 585
D R L+L EG+I + P +++ + RQ ++ +Q +P+ H+S TRL + N+
Sbjct: 459 DKRKLFLLGEGVIDKNNPLFNLLTEPEHRMRQASAAQRRKLVQGNPSLHLSLTRLALRNI 518
Query: 586 PKSMTEKGLKKLCIDAVV-------------------------------SRASKQKPVIK 614
P++M K LK+L AVV R +K K +I+
Sbjct: 519 PRNMESKDLKELARKAVVGFARDVKAGLRQPLSKEENARDGKDAKEKEHERKAKGKGIIR 578
Query: 615 QIKF-LQSLKKGKVDTKH--YSRGVAFVEFTEHQHALVALRVLN 655
Q K +S + K+ K SRG F+E+T H AL+ LR LN
Sbjct: 579 QAKIVFESGQGQKMQEKDGGKSRGYGFIEYTSHHWALMGLRYLN 622
>gi|71414297|ref|XP_809255.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70873610|gb|EAN87404.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 486
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 134/287 (46%), Gaps = 49/287 (17%)
Query: 422 DELQNTIFICNLPFDLDNEEVKQRF-SAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAA 480
D L+ +F+ LP D EE+ + F S FG+V + V ++ TK GTGF+ +VE A
Sbjct: 108 DPLETQLFLKRLPLDTSEEEMMKFFESRFGKVRRVLLVRNRATKTLAGTGFVHCGSVELA 167
Query: 481 TAAVS-ASKTTSGLGI-----------------------------------FLKGRQ--L 502
A + T L FL R+
Sbjct: 168 DKIFEHAQQNTRELAAANREEWQEKTTDLSHCQAKRMRFKLRTDACMFRDPFLNIRETRF 227
Query: 503 TVLKALDK------KLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSK 556
TV + L + A K+ ++K +D R+LYL +EGLIL TPAA G+ ++
Sbjct: 228 TVHRVLSRTDSQETSAALQKKKKRTKVAADDPRHLYLLREGLILPDTPAARGLHPQYLTM 287
Query: 557 RQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQI 616
Q +E + +L++ N VS TRL + NLP++M EK ++ + V S + K + +
Sbjct: 288 IQQDYEARKEQLRNSNLFVSTTRLNVRNLPRTMLEKEVRAIFAAPVRSFLKENKEHMDKD 347
Query: 617 KF--LQSLKKGKV--DTKHYSRGVAFVEFTEHQHALVALRVLNNNPS 659
K+ +K K+ D+ SRG AF+EF H AL ALR +NNNP+
Sbjct: 348 KWGKYGPIKNVKLVKDSAGTSRGYAFIEFVNHPIALHALRTINNNPT 394
>gi|389602711|ref|XP_001567657.2| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322505567|emb|CAM43100.2| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 446
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 138/296 (46%), Gaps = 67/296 (22%)
Query: 422 DELQNTIFICNLPFDLDNEEVKQRF-SAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAA 480
D L+ +F+ NLP D EE+ F + F V + + ++V+K GTGF+ + E A
Sbjct: 106 DPLETQLFLKNLPLDTSEEELMTYFKTHFSPVKRVLLMRNRVSKTLSGTGFVHCGSAELA 165
Query: 481 ----------TAAVSA------SKTTSGLG----------------------IFLKGRQL 502
VSA T GL ++ +
Sbjct: 166 GKIFDYAQQNAREVSAVGRDEMKAQTEGLSHHQAKRLVHKMHTDSFVVRDPFFMMRDTKF 225
Query: 503 TVLKALDKK------LAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEG-------- 548
TVL+ L + A K+ ++K +D RNLYL +EGL+L + AA+G
Sbjct: 226 TVLRVLSRSDTQEAVSAQQKKKRRTKVAADDPRNLYLLQEGLVLPDSAAAKGLHPRYLQM 285
Query: 549 VSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASK 608
+SDD +++Q +L + NF VS+TRL + NLP++MTE +++L + + K
Sbjct: 286 ISDDYAARKQ--------QLTNSNFFVSKTRLSVRNLPRTMTENDMRRLFAEQARTYLKK 337
Query: 609 QKPVIKQIKF-----LQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPS 659
I++ K+ ++++K K DT SRG F+EF H AL LR+LNNNP+
Sbjct: 338 HPEDIEKGKWGKYGPIRNVKLLK-DTAGVSRGYGFIEFVNHNVALNTLRMLNNNPT 392
>gi|71667510|ref|XP_820703.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70886059|gb|EAN98852.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 488
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 134/287 (46%), Gaps = 49/287 (17%)
Query: 422 DELQNTIFICNLPFDLDNEEVKQRF-SAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAA 480
D L+ +F+ LP D EE+ + F S FG+V + V ++ TK GTGF+ +VE A
Sbjct: 109 DPLETQLFLKRLPLDTSEEEMMKFFESRFGKVRRVLLVRNRATKTLAGTGFVHCGSVELA 168
Query: 481 TAAVS-ASKTTSGLGI-----------------------------------FLKGRQ--L 502
A + T L FL R+
Sbjct: 169 DKIFEHAQQNTRELAAANREEWQEKTTDLSHCQAKRMRFKLRTDACMFRDPFLNIRETRF 228
Query: 503 TVLKALDK------KLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSK 556
TV + L + A K+ ++K +D R+LYL +EGLIL TPAA G+ ++
Sbjct: 229 TVHRVLSRTDSQETSAALQKKKKRTKVAADDPRHLYLLREGLILPDTPAARGLHPQYLTM 288
Query: 557 RQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQI 616
Q +E + +L++ N VS TRL + NLP++M EK ++ + V S + K + +
Sbjct: 289 IQQDYEARKEQLRNSNLFVSTTRLNVRNLPRTMLEKEVRAIFAAPVRSFLKENKEHMDKD 348
Query: 617 KF--LQSLKKGKV--DTKHYSRGVAFVEFTEHQHALVALRVLNNNPS 659
K+ +K K+ D+ SRG AF+EF H AL ALR +NNNP+
Sbjct: 349 KWGKYGPIKNVKLVKDSAGTSRGYAFIEFVNHPIALHALRTINNNPT 395
>gi|70994844|ref|XP_752199.1| ribosome biogenesis (Nop4) [Aspergillus fumigatus Af293]
gi|66849833|gb|EAL90161.1| ribosome biogenesis (Nop4), putative [Aspergillus fumigatus Af293]
gi|159124888|gb|EDP50005.1| ribosome biogenesis (Nop4), putative [Aspergillus fumigatus A1163]
Length = 740
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 137/306 (44%), Gaps = 69/306 (22%)
Query: 419 EGEDELQN-TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTV 477
E EDE TIFI NLPF +E + + F+ FG + V+ T+RP+GTGF+ F V
Sbjct: 317 EKEDERNACTIFIRNLPFSCTDEALYEHFTQFGPLRYARIVVDPETERPRGTGFVCFWKV 376
Query: 478 EAATAAVSAS---------------KTTSGL-------------GIF-LKGRQLTVLKAL 508
E A V + K+++ L G + L GR L V +A+
Sbjct: 377 EDAALCVREAPKQQDTLIAEKDKGKKSSTALKHSILQNENSDPSGRYTLDGRVLQVARAV 436
Query: 509 DKKLA---HDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKM 565
K A ++ + K D R L+L +EG I +P +S ++ R+ +++
Sbjct: 437 SKSQAAKLEEEGVSKRLVRDTDKRRLFLLQEGTISPNSPLYHKLSPSEIKMREDSFKQRQ 496
Query: 566 TKLQ-SPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS-------------------- 604
++ +P H S TRL + N+P+ +T K LK+L AVV
Sbjct: 497 NFIRKNPALHFSLTRLSVRNIPRHVTSKDLKQLARQAVVGFAKDVKEGQRQPLSKEELTR 556
Query: 605 -----------RASKQKPVIKQIKFLQSLKKG-KVDTKH---YSRGVAFVEFTEHQHALV 649
R SK K ++KQ K + ++G K+ K SRG F+E+ H+HAL+
Sbjct: 557 SADAMKEAEEYRRSKGKGIVKQAKIVFETREGSKISEKSGAGRSRGYGFIEYYTHRHALM 616
Query: 650 ALRVLN 655
LR LN
Sbjct: 617 GLRWLN 622
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 72/134 (53%), Gaps = 9/134 (6%)
Query: 205 RQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDM---FSPVGLVWNVYIPHNTDTGLSKGFA 261
+Q + + TQ KLI+RN+P+ + E +D+ F G V V +P D GF
Sbjct: 149 KQREQQKTSTQPPKLIVRNLPWS--IKEPEDLAVHFRSFGKVKYVTLPKKGDK--LAGFG 204
Query: 262 FVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSD 321
FV K++AE A+Q NG++ R +AVDWAV K ++ + + + K D ++GS
Sbjct: 205 FVVLRGKKNAEKALQAVNGKEVDGRTLAVDWAVEKEVWENLKKES--EKKEDTQEEAGSS 262
Query: 322 DDLGDDDAETASDD 335
D DDAET SD+
Sbjct: 263 DVEMADDAETTSDN 276
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +R++P A + + FS ++ + + ++ +T L KG+ FV F DA++A+++F
Sbjct: 50 LFVRSLPTSATTESLTEYFSQSYVIKHAIVVNDPETKLCKGYGFVTFADLEDAQAALKEF 109
Query: 279 NGQKFGKRPIAVDWAVPKN 297
NG F + I VD+A P++
Sbjct: 110 NGSVFEGKTIRVDYAQPRH 128
>gi|189205843|ref|XP_001939256.1| nucleolar protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187975349|gb|EDU41975.1| nucleolar protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 756
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 132/296 (44%), Gaps = 67/296 (22%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVE-------- 478
T+F+ N+PF +D+E +K+ F FG + V+ + T+RPKGTGF+ F T E
Sbjct: 318 TLFVRNVPFTVDDERLKEHFQQFGGIRFARVVVDRETERPKGTGFVSFFTEEDMINCLKG 377
Query: 479 -------------------AATAAVSASKTTSGLGIF-LKGRQLTVLKALDKKLAHDKEI 518
T +V + G + + GR L + +A+DK A
Sbjct: 378 VPRVKLQKKNLDKKDGSTITVTHSVLEDEDADPTGKYTIDGRILQISRAVDKNEATRLTA 437
Query: 519 DKSK---NETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQ-SPNFH 574
+ + N D R LYL EG I +P + +S ++ R+ + ++Q +P+ H
Sbjct: 438 EGAASRFNRDKDKRRLYLLSEGTISSNSPLYQKLSPSEIKMREESATMRRKQIQENPSLH 497
Query: 575 VSRTRLVIYNLPKSMTEKGLKKLCIDAVVS------------------------------ 604
+S TRL + N+P+S+T K LK+L AVV
Sbjct: 498 LSLTRLSVRNIPRSITSKDLKQLARSAVVGFAADVKEGKRQKLNKEEVIRGGQEMLVAEK 557
Query: 605 -RASKQKPVIKQIKFLQSLKKG-KV--DT-KHYSRGVAFVEFTEHQHALVALRVLN 655
R K K ++KQ K + G KV DT SRG F+E+ H++AL+ LR LN
Sbjct: 558 MRKKKGKGIVKQAKVVYETPAGSKVSEDTGAGRSRGYGFIEYYTHRNALMGLRWLN 613
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 90/178 (50%), Gaps = 28/178 (15%)
Query: 177 VLYTTVKSACASVALLHQKEIKGGTV-----WARQLGGEGSK-----------------T 214
V + V+ A + L+ EIKG + ARQ GE +
Sbjct: 87 VTFADVEDAQRAKEELNNTEIKGKKIKVDFAEARQREGEEKRPRAGDRAKAEREQQIKEA 146
Query: 215 QKWKLIIRNIPFKAKVNE-IKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAES 273
Q KLIIRN+P+ K E ++ +F G V V +P + G +GF FV K++AE
Sbjct: 147 QTPKLIIRNLPWTIKTQEDLQKLFRSYGKVNFVNLPKKPN-GELRGFGFVSLRGKKNAER 205
Query: 274 AIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGD-DDAE 330
AIQ+ NG++ +RPIAVDWAV ++ + S + +GD + +G++D+ D DDAE
Sbjct: 206 AIQELNGKEIDERPIAVDWAVDRDTWQS---LQKTEQEGDDEAKAGAEDEDKDMDDAE 260
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASL-EQRRSKV 59
+V K + E + +G+V FA +EDA RA E N T + G+KI V A R E++R +
Sbjct: 72 VVLDKETRESKSYGFVTFADVEDAQRAKEELNNTEIKGKKIKVDFAEARQREGEEKRPRA 131
Query: 60 TQEVQAE 66
+AE
Sbjct: 132 GDRAKAE 138
>gi|330935481|ref|XP_003304989.1| hypothetical protein PTT_17723 [Pyrenophora teres f. teres 0-1]
gi|311318179|gb|EFQ86926.1| hypothetical protein PTT_17723 [Pyrenophora teres f. teres 0-1]
Length = 756
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 132/296 (44%), Gaps = 67/296 (22%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVE-------- 478
T+F+ N+PF +D+E +K+ F FG + V+ + T+RPKGTGF+ F E
Sbjct: 318 TLFVRNVPFTVDDERLKEHFQQFGGIRFARVVVDRETERPKGTGFVSFFAEEDMINCLKG 377
Query: 479 -------------------AATAAVSASKTTSGLGIF-LKGRQLTVLKALDKKLAHDKEI 518
T +V + G + + GR L + +A+DK A
Sbjct: 378 VPRVKLQKKNLDKKDGSTITVTHSVLEDEDADPTGKYTIDGRILQISRAVDKNEATRLTA 437
Query: 519 DKSKNETN---DHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQ-SPNFH 574
+ + + N D R LYL EG I +P + +S ++ R+ + ++Q +P+ H
Sbjct: 438 EGAASRYNRDKDKRRLYLLSEGTISSNSPLYQKLSPSEIKMREESATMRRKQIQENPSLH 497
Query: 575 VSRTRLVIYNLPKSMTEKGLKKLCIDAVVS------------------------------ 604
+S TRL I N+P+S+T K LK+L AVV
Sbjct: 498 LSLTRLSIRNIPRSITSKDLKQLARSAVVGFAADVKEGKRQKLNKEEVIRGGQEMLVAEK 557
Query: 605 -RASKQKPVIKQIKFLQSLKKG-KV--DT-KHYSRGVAFVEFTEHQHALVALRVLN 655
R K K ++KQ K + G KV DT SRG F+E+ H++AL+ LR LN
Sbjct: 558 MRKKKGKGIVKQAKVVYETPAGSKVSEDTGAGRSRGYGFIEYYTHRNALMGLRWLN 613
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV--KHAMHRASLEQR--- 55
+V K + E + +G+V FA +EDA RA E N T + G+KI V A R E+R
Sbjct: 72 VVLDKETRESKSYGFVTFADVEDAQRAKEELNNTEIKGKKIKVDFAEARQREGEEKRPSA 131
Query: 56 --RSKVTQEVQ 64
R+K +E Q
Sbjct: 132 GDRAKAEREQQ 142
>gi|74026186|ref|XP_829659.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70835045|gb|EAN80547.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 433
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 136/301 (45%), Gaps = 64/301 (21%)
Query: 421 EDELQNTIFICNLPFDLDNEEVKQRF-SAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEA 479
+D L+ +F+ LP D EE+ F + FG V + V + TK GTGF+ TVE
Sbjct: 99 QDPLETQLFLKRLPLDTSEEELLNFFQTRFGGVRRVLLVRNSRTKTLAGTGFIHCGTVEM 158
Query: 480 A----------TAAVSAS------KTTSGLG------IFLKGR----------------Q 501
A +SA+ + T L + K R +
Sbjct: 159 ADKIFDHAQQNARELSANDRADWREQTKDLSHCRAKRLLFKNRADAFNSREPFMTLRETR 218
Query: 502 LTVLKALDKKLAHD------KEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMS 555
TV + L +K +HD K+ ++K +D R+LYL +EGLIL TPAA G+ +
Sbjct: 219 FTVHRVLSRKDSHDATAAQQKKKKRTKVAADDPRHLYLLQEGLILPDTPAARGLHPRYIE 278
Query: 556 KRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPV--- 612
+ +E + +L+ N VS TRL + NLP++M EK L+ L V S K K
Sbjct: 279 MIRADYESRKNQLRDSNMFVSTTRLSVRNLPRTMGEKELRLLFSTHVRSFLKKNKNFADK 338
Query: 613 --------IKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPSKLFYH 664
IK +K ++ D+ S+G AFVE H AL ALR LNNNP+ +F
Sbjct: 339 SNWGKYGPIKNVKIVK-------DSAGTSKGYAFVELVNHPVALHALRALNNNPT-IFGD 390
Query: 665 H 665
H
Sbjct: 391 H 391
>gi|261335681|emb|CBH18675.1| DRBD10 [Trypanosoma brucei gambiense DAL972]
Length = 433
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 136/301 (45%), Gaps = 64/301 (21%)
Query: 421 EDELQNTIFICNLPFDLDNEEVKQRF-SAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEA 479
+D L+ +F+ LP D EE+ F + FG V + V + TK GTGF+ TVE
Sbjct: 99 QDPLETQLFLKRLPLDTSEEELLNFFQTRFGGVRRVLLVRNSRTKTLAGTGFIHCGTVEM 158
Query: 480 A----------TAAVSAS------KTTSGLG------IFLKGR----------------Q 501
A +SA+ + T L + K R +
Sbjct: 159 ADKIFDHAQQNARELSANDRADWCEQTKDLSHCRAKRLLFKNRADAFNSREPFMTLRETR 218
Query: 502 LTVLKALDKKLAHD------KEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMS 555
TV + L +K +HD K+ ++K +D R+LYL +EGLIL TPAA G+ +
Sbjct: 219 FTVHRVLSRKDSHDATAAQQKKKKRTKVAADDPRHLYLLQEGLILPDTPAARGLHPRYIE 278
Query: 556 KRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPV--- 612
+ +E + +L+ N VS TRL + NLP++M EK L+ L V S K K
Sbjct: 279 MIRADYESRKNQLRDSNMFVSTTRLSVRNLPRTMGEKELRLLFSTHVRSFLKKNKNFADK 338
Query: 613 --------IKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPSKLFYH 664
IK +K ++ D+ S+G AFVE H AL ALR LNNNP+ +F
Sbjct: 339 SNWGKYGPIKNVKIVK-------DSAGTSKGYAFVELVNHPVALHALRALNNNPT-IFGD 390
Query: 665 H 665
H
Sbjct: 391 H 391
>gi|407923520|gb|EKG16590.1| hypothetical protein MPH_06171 [Macrophomina phaseolina MS6]
Length = 759
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 134/295 (45%), Gaps = 66/295 (22%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKF----------- 474
+T+FI NLPF +E++++ F FG V V+ + T +PKGTGF+ F
Sbjct: 321 STLFIRNLPFTCTDEDLEEHFEQFGGVRYARVVMDRATGKPKGTGFVCFFKEEDALACLK 380
Query: 475 -----------KTVEAATAAVSASKTTSG--LGIF-LKGRQLTVLKALDK----KLAHDK 516
K A AA S + T G + L+GR L + KA+++ KL +
Sbjct: 381 GAPKQHQPQNPKDKSAPIAAHSVLQNTDADPTGQYTLEGRVLNITKAVERNEAEKLTAEG 440
Query: 517 EIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQM-LHEKKMTKLQSPNFHV 575
+ K + ND R LYL EG + +P + +S ++ R+ L ++K +P+ +
Sbjct: 441 VAHRYKRD-NDKRKLYLLSEGTVASNSPLYQLLSPAEIQLREASLRQRKQLIESNPSLSM 499
Query: 576 SRTRLVIYNLPKSMTEKGLKKLCIDAVV-------------------------------S 604
S TRL I N+P+S+T K LK+L A+V
Sbjct: 500 SLTRLSIRNIPRSVTSKDLKQLARQAIVGFAKDLKEGKRSPLSQEELRRGDAEMREADKE 559
Query: 605 RASKQKPVIKQIKFLQSLKKGKVDTKH----YSRGVAFVEFTEHQHALVALRVLN 655
R K K V++Q K + K G ++ SRG FVE+ H+HAL+ LR LN
Sbjct: 560 RKKKGKGVVRQAKIVFENKDGSKVAENSGAGRSRGYGFVEYYNHRHALMGLRWLN 614
>gi|47216059|emb|CAG11390.1| unnamed protein product [Tetraodon nigroviridis]
Length = 720
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 125/248 (50%), Gaps = 62/248 (25%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
TIFI NL FD + EE+++ FGE+ V+ T+ KG F +F++ E+A ++A
Sbjct: 311 TIFIRNLSFDTEEEELEKVLLQFGELNYVKIVIQPETEHSKGCAFAQFRSKESADKCIAA 370
Query: 487 SKTTS-GLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
++ S GI + GR+L ++ A+ K+ A + +K K ET RNLYLA+EGLI GT A
Sbjct: 371 AQVDSESGGIRVDGRKLFIVTAVSKEDAVKLKENKVKVETGT-RNLYLAREGLIRAGTQA 429
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS+ DM KR +R+R V+Y+
Sbjct: 430 AEGVSETDMIKR------------------TRSR-VMYD--------------------- 449
Query: 606 ASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPSKLFYHH 665
+KP+ Q+ QSL G FV+F EH+HAL ALR LNNNP +F +
Sbjct: 450 ---RKPLKGQV-MGQSL------------GYGFVQFKEHEHALSALRYLNNNPD-IFGPN 492
Query: 666 ---CFDAA 670
CF +A
Sbjct: 493 KVKCFSSA 500
>gi|296827786|ref|XP_002851224.1| nucleolar protein 4 [Arthroderma otae CBS 113480]
gi|238838778|gb|EEQ28440.1| nucleolar protein 4 [Arthroderma otae CBS 113480]
Length = 734
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 133/297 (44%), Gaps = 67/297 (22%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
+TIFI NLPF ++ + + FS FG + VL T+RPKGT F+ F VE A A +
Sbjct: 305 STIFIRNLPFSATDDTLYEHFSKFGSLRYARVVLDPATERPKGTAFVCFYRVEDAAACIR 364
Query: 486 AS---------------------------KTTSGLGIF-LKGRQLTVLKALDKKLAHD-K 516
+ + G + + GR L V +A+ + A +
Sbjct: 365 GAPRETDSARSKDPRQKAATRQMHSVLEDENNDPTGRYTMDGRVLQVSQAVSRTEAGRLE 424
Query: 517 EIDKSKNETNDH--RNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQS-PNF 573
E S+ E DH R L+L EG I +PA +S+ + R+ +++ ++S P
Sbjct: 425 EEGSSRREARDHDKRRLFLLSEGTIPSNSPAYAKLSETERKMREASAKQRQKLIKSNPML 484
Query: 574 HVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS----------------------------- 604
HVS TRL + NLP+ + K LK L +AVV
Sbjct: 485 HVSLTRLSVRNLPRHIDSKALKALAREAVVGFAKDVKNGLRKPISWEESRRSAALMKEAD 544
Query: 605 --RASKQKPVIKQIKFLQSLKKG-KVDTKH---YSRGVAFVEFTEHQHALVALRVLN 655
R S++K ++KQ K + K G K++ K SRG F+E+ H+++L+ LR LN
Sbjct: 545 HLRKSQKKGIVKQAKVVFEGKDGSKMNDKAGAGRSRGYGFIEYATHRNSLMGLRWLN 601
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +R++P A + + FS + + + + T SKG+ FV FT DA+SA ++
Sbjct: 32 LFVRSLPSTATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYGFVTFTDHEDAQSAAKEL 91
Query: 279 NGQKFGKRPIAVDWAVPKN 297
N F + I +++A P++
Sbjct: 92 NNSVFEGKKIKIEFAEPRH 110
>gi|406864898|gb|EKD17941.1| RNA recognition domain-containing protein-containing protein
[Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 810
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 138/292 (47%), Gaps = 65/292 (22%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAA------ 480
T+FI NLPF + + E+K+ F FG V V+ + T RP+GTGF+ F + A
Sbjct: 355 TLFIRNLPFTVRDAELKEHFEQFGPVRYARVVMDRATDRPRGTGFVCFYNLHDADMCFRN 414
Query: 481 ------TAAVSASKT-----------TSGLGIFLKGRQLTVLKALDK----KLAHDKEID 519
T A + +K TSG+ L GR + V KA++K KL + E
Sbjct: 415 APKHQPTGANAITKIKHSILENDAADTSGM-YSLDGRLILVSKAVEKETAVKLTENGENM 473
Query: 520 KSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQ-SPNFHVSRT 578
+++ E D R LYL EG + +GTP + ++ +++ R+ +++ +Q +P +S T
Sbjct: 474 RTQAE-KDKRKLYLLSEGTVAKGTPLYDALAPSEVTMREDSAKQRKKLIQNNPMLSLSLT 532
Query: 579 RLVIYNLPKSMTEKGLKKLCIDAVVSRA-------------------------------S 607
RL I NLPK+ T K LK L +AV+ A +
Sbjct: 533 RLSIRNLPKNYTSKDLKTLAREAVIGFAKDVKAGLRQPLSSEEKNRGGKEMREAEKVGKA 592
Query: 608 KQKPVIKQIKFLQSLKKG-KVDTKH---YSRGVAFVEFTEHQHALVALRVLN 655
K K V+ Q K + ++G KV SRG FVE++ H+ AL+ LR +N
Sbjct: 593 KGKGVVHQAKIVFEGREGTKVSEGSGAGKSRGYGFVEYSSHRLALMGLRWMN 644
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 46/79 (58%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +R++P A +++ ++FS + + + + +T SKG+ FV DA+ A+++F
Sbjct: 48 LFVRSLPAIATSDKLTELFSQDYPLKHATVVLDPETKQSKGYGFVTLADAEDAQRALEEF 107
Query: 279 NGQKFGKRPIAVDWAVPKN 297
NG+ F R + ++ A P++
Sbjct: 108 NGKTFMGRKMKIEIAQPRS 126
>gi|116191833|ref|XP_001221729.1| hypothetical protein CHGG_05634 [Chaetomium globosum CBS 148.51]
gi|88181547|gb|EAQ89015.1| hypothetical protein CHGG_05634 [Chaetomium globosum CBS 148.51]
Length = 792
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 130/292 (44%), Gaps = 61/292 (20%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVE-------- 478
T+FI NLP+ +E +K F+ FG V V+ + T RP GTGF+ F E
Sbjct: 354 TLFIRNLPYSTTDETLKAHFATFGPVRYARVVMDRATDRPAGTGFVCFFNEEDFKACLKG 413
Query: 479 ---------AATAAVSASKTTSGLGIF-LKGRQLTVLKALDK----KLAHDKEIDKSKNE 524
A +V +T G + L GR L V A+ K +LA + K +
Sbjct: 414 APRHQPIATLAKHSVLQDETADPEGKYTLDGRILQVAHAVSKDEATRLADE---GAGKRK 470
Query: 525 TNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQS-PNFHVSRTRLVIY 583
D R L+L EG I +P + ++ R+ +++ ++S P+ H+S TR+ I
Sbjct: 471 EKDKRRLFLLSEGSISPNSPLFNQFTPAEIKMREASAKQRKKMIESNPSLHLSLTRMAIR 530
Query: 584 NLPKSMTEKGLKKLCIDAVVS-------------------------------RASKQKPV 612
NLP ++ KGLK L +AVV R K K V
Sbjct: 531 NLPHNLDSKGLKALAREAVVGFAKDVKEGRRLPISKEENSRGGDEDREAERRRKEKGKGV 590
Query: 613 IKQIKFLQSLKKG-KVDTKH---YSRGVAFVEFTEHQHALVALRVLNNNPSK 660
++Q K + +G K+D K SRG F+E++ H+ AL+ LR LN +P K
Sbjct: 591 VRQAKIVFETAQGSKIDEKTGGGKSRGYGFIEYSSHRWALMGLRYLNGHPMK 642
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 218 KLIIRNIPFKAKV-NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
KLIIRN+P+ K +++ +F G V +P+N G GF FV +++AE AI+
Sbjct: 153 KLIIRNLPWSIKTSDQLAKLFQSFGKVKFSDLPNNK--GKLSGFGFVTLRGRKNAEKAIE 210
Query: 277 KFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSD 317
NG++ R +AVDWAV K + Q GD D
Sbjct: 211 AINGKEVDGRTLAVDWAVDKQTWE--------QQNGDAQED 243
>gi|358399192|gb|EHK48535.1| hypothetical protein TRIATDRAFT_236581 [Trichoderma atroviride IMI
206040]
Length = 681
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 129/287 (44%), Gaps = 59/287 (20%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV- 484
+T+F+ NLPF +E++K F FG V V+ + T RP GTGF+ F E A + +
Sbjct: 270 STVFVRNLPFTATDEQLKSFFGHFGTVRYARVVMDKATDRPAGTGFVCFVDNEDAKSCII 329
Query: 485 ----SASKTTSGL-------------GIF-LKGRQLTVLKALDKKLAHD-KEIDKSKNET 525
A T G+ G + + GR L V +A++K A + E ++
Sbjct: 330 NAPRRAPPTAGGVKHSILQDENADPSGKYTMDGRVLQVAQAVNKNEAANLAENSLAQRRQ 389
Query: 526 NDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL--QSPNFHVSRTRLVIY 583
D R+LYL EG I G G+ D + + + ++ KL ++P H+S TRL +
Sbjct: 390 KDKRHLYLLSEGAI--GNSPLRGLLTDAEVRMRTMSAQQRKKLVEKNPMLHISLTRLALR 447
Query: 584 NLPKSMTEKGLKKLCIDAVVS-------------------------------RASKQKPV 612
N+P M K LK+L AVV R K+K +
Sbjct: 448 NIPNDMGAKELKELARKAVVEFAKDVKEGRRQPPSKEENARDGKDAKDKEKDRKQKRKGI 507
Query: 613 IKQIKFLQSLKKG-KVDTKH---YSRGVAFVEFTEHQHALVALRVLN 655
+KQ K + KG KV SRG F+E+T H+HAL+ LR LN
Sbjct: 508 VKQAKIVFEDNKGSKVSESSGAGKSRGYGFIEYTSHRHALMGLRYLN 554
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 208 GGEGSKTQKWKLIIRNIPFKAKVNE-IKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFT 266
G E + KLIIRN+P+ K +E + +F G V +P N G KGF FV
Sbjct: 135 GREAFQRPSTKLIIRNLPWSIKTSEQLSKLFLSYGKVIYSDLPQNK--GKLKGFGFVTIR 192
Query: 267 CKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIY 299
+ +AE A++ NG+ RP+AVDWAV K +
Sbjct: 193 GRPNAEKALEAVNGKIVDGRPLAVDWAVDKATW 225
>gi|300176093|emb|CBK23404.2| unnamed protein product [Blastocystis hominis]
Length = 466
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 135/284 (47%), Gaps = 35/284 (12%)
Query: 407 SSKSKPKSLKQTE----GEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQV 462
+SK P S KQ G+ + T+F+ N+P + + F FG +V + ++
Sbjct: 63 ASKDSPASSKQYTARVLGDADEGRTLFVQNIPLEASQHALFAFFQRFGALVYAKLCVDKL 122
Query: 463 TKRPKGTGFLKFKTVEAATAAVSASKTTSGLG---------IFLKGRQLTV-LKALDKKL 512
T P+GTGF+KF++ A + + S + L GR L + L K+L
Sbjct: 123 TGLPRGTGFVKFESPAVAASLLRRFDPYSRPAGEAPADSELLTLLGRPLQISLAVAPKQL 182
Query: 513 AHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPN 572
+ ++ + D+RNLYL EG I E +++ D KR+ ++K+ KL++P
Sbjct: 183 --KQTLESRELARKDNRNLYLLNEGKIAEDRRG--DMNNRDWEKRERAEKEKLEKLENPL 238
Query: 573 FHVSRTRLVIYNLPKSMTEKGLKKLCIDAV---------------VSRASKQKPVIKQIK 617
F V+ RL++ NL +T L+++CI AV +S + K+I
Sbjct: 239 FFVNPKRLLVKNLGTFVTGNYLRQICIYAVRRALALDLVSVDEMKLSLRPAGNAIPKKIH 298
Query: 618 FLQSLKKGKVD--TKHYSRGVAFVEFTEHQHALVALRVLNNNPS 659
+Q++ +K S+G FVEF EH HAL LR LNNNP+
Sbjct: 299 VVQAVVASDESRGSKKASKGFGFVEFEEHAHALACLRFLNNNPA 342
>gi|401427289|ref|XP_003878128.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494375|emb|CBZ29676.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 448
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 135/302 (44%), Gaps = 79/302 (26%)
Query: 422 DELQNTIFICNLPFDLDNEEVKQRF-SAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAA 480
D L+ +F+ NLP D EE+ F + F V + V ++ +K GTGF+ + E A
Sbjct: 108 DPLETQLFLKNLPLDTSEEELMTYFKTHFSAVKRVLLVRNRASKALSGTGFVHCGSAEVA 167
Query: 481 ----TAAVSASKTTSGLG----------------------------------IFLKGRQL 502
A ++ S +G + ++ +
Sbjct: 168 GKIFDYAQQNARELSAVGREDMKAQTESLSHHQAKRLMHKMRTDSFVVRDPFLTMRDTKF 227
Query: 503 TVLKALDKK------LAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVS------ 550
TVL+ L + A K+ ++K +D RNLYL +EGL+L G+ AA+G+
Sbjct: 228 TVLRVLSRSDTQEAVSAQQKKKKRTKVAADDPRNLYLLQEGLVLPGSAAAKGLHPRYLQM 287
Query: 551 -DDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCI---------- 599
+DD + R+ +L + N+ VS+TRL + NLP++M+E +++L
Sbjct: 288 IEDDYAGRKQ-------QLTNSNYFVSKTRLSVRNLPRTMSENDMRRLFAEQARAYLKKH 340
Query: 600 --DAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNN 657
DA + K P I+ +K L+ DT SRG F+EF H AL LR+LNNN
Sbjct: 341 PEDAEKGKWGKYGP-IRNVKLLK-------DTAGVSRGYGFIEFVNHNVALNTLRMLNNN 392
Query: 658 PS 659
P+
Sbjct: 393 PT 394
>gi|409043823|gb|EKM53305.1| hypothetical protein PHACADRAFT_185997 [Phanerochaete carnosa
HHB-10118-sp]
Length = 959
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 140/320 (43%), Gaps = 81/320 (25%)
Query: 423 ELQNTIFICNLPFDLDNEEVKQRFSAFGEV-VSFVPVLHQVTKRPKGTGFLKFKTVEAAT 481
E+ T+F+ N+PF+ +E++ F AFG + + + V H+ T R +GT F+ F E A
Sbjct: 493 EVGTTVFVRNVPFEATEDELRAVFRAFGPLRYAKIAVDHE-TGRSRGTSFVCFWNKEHAD 551
Query: 482 AAVSAS----KTTSGL----------------------------GIFLKGRQLTVLKALD 509
+ S K T G + L GR + V++A+
Sbjct: 552 KVIEQSEILRKETMGAEAPTVQPKKNPFKLPSLLTPDPSASVAQNLVLHGRTMDVIRAVT 611
Query: 510 KKLAHD-KEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL 568
++ A KE + + E D RNLYL +EG+IL T AAEG+ ++ +R + L
Sbjct: 612 REEAGKLKEAGERQREKADKRNLYLLREGIILPSTSAAEGLPSAEIERRTNSFNARRALL 671
Query: 569 QS-PNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVV------------------------ 603
+S P+ +VSRTRL + LP +TE+ LK+L I A
Sbjct: 672 RSNPSLYVSRTRLSVRQLPLIVTERILKRLGIHAARAFEAEVKAGTRNGLTEDELMEPLV 731
Query: 604 ---------------SRASK---QKPVIKQIKFL-QSLKKGKVDTKHYSRGVAFVEFTEH 644
+RA K + +KQ K + Q + V K SRG F+E ++H
Sbjct: 732 DAEDTEALSAKDKGKARADKKGSRNTGVKQAKIVRQQDRVDPVTGKGRSRGYGFLEMSKH 791
Query: 645 QHALVALRVLNNNPS--KLF 662
AL LR NNNP KLF
Sbjct: 792 ADALRVLRWANNNPEVGKLF 811
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 130/317 (41%), Gaps = 75/317 (23%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKN---GTSVGGRKIGVKHAMHRASLEQRRS 57
+V ++G+ +G GYV FA+ EDA A + N G + GRK+ V+ A
Sbjct: 56 VVLEQGTETSKGVGYVSFAIREDAQLAFDKVNEPEGLMLDGRKLRVQWA----------- 104
Query: 58 KVTQEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVK--PRKAATLGIDLADKEDCS 115
G + H + S VK P+ A I KE
Sbjct: 105 -----------------------GGKPHKDEKQASDSPVKKEPKPAKVPKI----KEPIG 137
Query: 116 QKQRVA-RTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPL----PKEELEQHGL-AQEG 169
+ A RT++I GL ++ + + V YP ++ H L +
Sbjct: 138 LRDPNAIRTIVITGLPQGIDSKALWKKVRKYDGAEKVEYPAKINDEEDSFTAHALFSTPA 197
Query: 170 CKMDASAVLYTTV-KSACASVALLHQKEIKGGTVWARQLG-----------GEGSKTQKW 217
+A + L+ V K A SV L +K ++G R++ G + ++
Sbjct: 198 AAQEAVSKLHAHVFKGALLSVTL--KKRLEGLAKAPRKMATKDPSSSEAPVGIPAPSRAS 255
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTG------------LSKGFAFVKF 265
+LI+RN+PF +++ +F P G +++++IP TG +KG+AFV +
Sbjct: 256 RLIVRNLPFDITEPDLRAVFLPYGPIYSIHIPLAEPTGPKHEETGEASKRRTKGYAFVWY 315
Query: 266 TCKRDAESAIQKFNGQK 282
K+DAE A++ NG K
Sbjct: 316 LSKKDAEKALENANGTK 332
Score = 46.6 bits (109), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
+T+F+ NLP+ + ++K S G V + VL Q T+ KG G++ F E A A
Sbjct: 25 STLFVSNLPYSATSTDLKTLLSDIGPVRTAFVVLEQGTETSKGVGYVSFAIREDAQLAF- 83
Query: 486 ASKTTSGLGIFLKGRQLTVLKA-----LDKKLAHDKEIDK 520
K G+ L GR+L V A D+K A D + K
Sbjct: 84 -DKVNEPEGLMLDGRKLRVQWAGGKPHKDEKQASDSPVKK 122
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 123/343 (35%), Gaps = 98/343 (28%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+P+ A ++K + S +G V ++ T SKG +V F + DA+ A K
Sbjct: 27 LFVSNLPYSATSTDLKTLLSDIGPVRTAFVVLEQGTETSKGVGYVSFAIREDAQLAFDKV 86
Query: 279 N---GQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDD 335
N G R + V WA GG D + ASD
Sbjct: 87 NEPEGLMLDGRKLRVQWA--------GGKP--------------------HKDEKQASD- 117
Query: 336 SNSSEKEDLPSNAD-FDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTVN 394
+ +KE P+ E + + + TG LP D AL K ++ D + V
Sbjct: 118 -SPVKKEPKPAKVPKIKEPIGLRDPNAIRTIVITG-LPQGIDSKALWKKVRKYDGAEKVE 175
Query: 395 ESAKVSD--------------------VSKLNSSKSKPKSL-----KQTEG--------- 420
AK++D VSKL++ K L K+ EG
Sbjct: 176 YPAKINDEEDSFTAHALFSTPAAAQEAVSKLHAHVFKGALLSVTLKKRLEGLAKAPRKMA 235
Query: 421 --------------EDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VPVL------ 459
+ + + NLPFD+ +++ F +G + S +P+
Sbjct: 236 TKDPSSSEAPVGIPAPSRASRLIVRNLPFDITEPDLRAVFLPYGPIYSIHIPLAEPTGPK 295
Query: 460 HQVT-----KRPKGTGFLKF---KTVEAATAAVSASKTTSGLG 494
H+ T +R KG F+ + K E A + +K +G+
Sbjct: 296 HEETGEASKRRTKGYAFVWYLSKKDAEKALENANGTKVYAGMA 338
>gi|409074598|gb|EKM74992.1| hypothetical protein AGABI1DRAFT_47085, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 777
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 136/303 (44%), Gaps = 67/303 (22%)
Query: 423 ELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATA 482
E+ T+F+ N+PF ++E++ F +FG + + T R +GTGF F +E A
Sbjct: 381 EVGTTLFVRNVPFTATDDELRLLFRSFGPLRYARITMDLDTGRSRGTGFACFWNLEDADK 440
Query: 483 AVSAS----KTTSG-----------------------LGIFLKGRQLTVLKALDKKLAHD 515
+ S K T+G + L GR L V++A+ + A
Sbjct: 441 VIEQSDLLRKETTGDAPTKNPFVLPSILTPDPSASLAQSLVLHGRTLDVVRAVTRDQASK 500
Query: 516 -KEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQS-PNF 573
KE + + D RN+YL KEG+IL +P A+ ++ D+ +R H + L+S P+
Sbjct: 501 LKEDGEKARQKADKRNMYLLKEGVILPNSPLAKDLAPADLERRTNSHNARRALLKSNPSL 560
Query: 574 HVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQK----------------------- 610
++SRTRL + +P +TE+ LK+L + AV + S+ K
Sbjct: 561 YISRTRLSVRQIPLFVTERVLKRLALHAVRAFESEVKEGSRVGLTTDELTEPLPTAEDEG 620
Query: 611 --PVIKQIKFL---QSLKKGK----------VDTKHYSRGVAFVEFTEHQHALVALRVLN 655
PV KQ +F ++K+ K + K S+G FVE +H AL LR N
Sbjct: 621 GPPVKKQKRFTGRSTAVKQTKIVRQQDRVDVITGKGRSKGYGFVEMQKHSDALRVLRWAN 680
Query: 656 NNP 658
NP
Sbjct: 681 CNP 683
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 128/332 (38%), Gaps = 84/332 (25%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVE--MKNGTSVGGRKIGVKHAMHRASLEQRRSK 58
+VT+ G+ +G GYV FA+ EDA A + K G S+ GRK+ + A H+
Sbjct: 36 VVTEHGTGVSKGVGYVSFAMKEDAEAAYQKISKEGISLVGRKLRAEWAEHKP-------- 87
Query: 59 VTQEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQ 118
KH K E + KPR ++
Sbjct: 88 -------------------------KHKPKDEEVPAS-KPRP-------ISHTPKAPHDP 114
Query: 119 RVARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEE-LEQHGLAQEGCKMDASAV 177
RT+II GL A+++ + V +P E+ E +A
Sbjct: 115 VAIRTIIISGLPQTLDAKQLWKKIRKYDGAEKVDWPYKSEDGTEDPSIAH---------A 165
Query: 178 LYTTVKSACASVALLHQKEIKGGTV----------------------WARQLGGEGSKTQ 215
L++T +A +V LH KG + + + +
Sbjct: 166 LFSTPSAANNAVTKLHAHVFKGSLLSVALKKRLENLSKAANPAKSKLTDTKTTTTLAPSH 225
Query: 216 KWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGL-SKGFAFVKFTCKRDAESA 274
+LI+RN+PF +++ +F P G + ++IP + +KGFAFV K DAE A
Sbjct: 226 ASRLIVRNLPFDITEQDLRAVFLPYGPIHEIHIPGVEGSKTRTKGFAFVWMLSKPDAERA 285
Query: 275 IQKFNGQKFGK-------RPIAVDWAVPKNIY 299
I+ NG K G+ R I VDWA+ KN +
Sbjct: 286 IEGCNG-KLGQQSKVMSERTIVVDWAMSKNKW 316
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+P+ A +I+ +FS + V + ++ TG+SKG +V F K DAE+A QK
Sbjct: 7 LFVSNLPYTATSVDIQTLFSDIAPVRSAFVVTEHGTGVSKGVGYVSFAMKEDAEAAYQKI 66
Query: 279 N--GQKFGKRPIAVDWA 293
+ G R + +WA
Sbjct: 67 SKEGISLVGRKLRAEWA 83
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Query: 424 LQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAA 483
L+ T+F+ NLP+ + +++ FS V S V T KG G++ F E A AA
Sbjct: 3 LRPTLFVSNLPYTATSVDIQTLFSDIAPVRSAFVVTEHGTGVSKGVGYVSFAMKEDAEAA 62
Query: 484 VSASKTTSGLGIFLKGRQLTVLKALDKKLAH---DKEIDKSKNETNDH 528
+ S GI L GR+L A + K H D+E+ SK H
Sbjct: 63 Y---QKISKEGISLVGRKLRAEWA-EHKPKHKPKDEEVPASKPRPISH 106
>gi|451856277|gb|EMD69568.1| hypothetical protein COCSADRAFT_32266 [Cochliobolus sativus ND90Pr]
Length = 754
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 131/296 (44%), Gaps = 67/296 (22%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVE-------- 478
T+F+ N+PF +D+E +K+ F FG + V+ + T+RPKGT F+ F T E
Sbjct: 316 TVFVRNVPFTVDDERLKEHFQQFGGIRYARVVVDRDTERPKGTAFVAFFTEEDMVNCLKG 375
Query: 479 -------------------AATAAVSASKTTSGLGIF-LKGRQLTVLKALDKKLAHDKEI 518
T +V + G + + GR L + +A+DK A
Sbjct: 376 IPRVKLQKKDLNKSDGSTITVTHSVLEDEDADPTGRYTIDGRILQISRAVDKNEASRLTA 435
Query: 519 DKSKNETN---DHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQ-SPNFH 574
+ + + N D R LYL EG I +P + +S ++ R+ + ++Q +P+ H
Sbjct: 436 EGAASRFNRDKDKRRLYLLSEGTISSNSPLYQKLSPSEIKMREESATMRRKQIQENPSLH 495
Query: 575 VSRTRLVIYNLPKSMTEKGLKKLCIDAVVS------------------------------ 604
+S TRL + N+P+S+T K LK+L AVV
Sbjct: 496 LSLTRLSVRNIPRSITSKDLKQLARSAVVGFAADVKVGKRQKLSKEEVIRGGQEMLVAEK 555
Query: 605 -RASKQKPVIKQIKFLQSLKKG-KVDTKH---YSRGVAFVEFTEHQHALVALRVLN 655
R K K ++KQ K + G KV + SRG F+E+ H++AL+ LR LN
Sbjct: 556 MRKKKGKGIVKQAKVVFETPAGSKVPEEAGAGRSRGYGFIEYYTHRNALMGLRWLN 611
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASL-EQRRSKV 59
+V K + E +G+G+V FA +EDA RA E N T + G+KI V A R E++R +
Sbjct: 74 VVLDKETRESKGYGFVTFADVEDAQRAKEELNNTQIKGKKIKVDFAEARQREGEEKRPRA 133
Query: 60 TQEVQAE 66
++AE
Sbjct: 134 ADRIKAE 140
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 2 VTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHR 49
+ KK + E RGFG+V ++A +A++ NG +GGR I V A+ R
Sbjct: 183 LPKKPNGELRGFGFVSLRGKKNAEKAMQELNGKEIGGRPIAVDWAVDR 230
>gi|348578893|ref|XP_003475216.1| PREDICTED: RNA-binding protein 28-like isoform 2 [Cavia porcellus]
Length = 705
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 108/233 (46%), Gaps = 58/233 (24%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS- 485
T+FI NL FD + EE+ + FG++ VLH T+ KG F +F T EAA ++
Sbjct: 335 TVFIRNLSFDSEEEELGELLQQFGDLKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLTA 394
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
AS T G G+ L GRQL + A+ + A + K K T RNLYLA+EGLI GT A
Sbjct: 395 ASPETEGGGLKLDGRQLKIDLAVTRDEAAKLQTKKVKKPTGT-RNLYLAREGLIRAGTKA 453
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
AEGVS DM+KR+ R R
Sbjct: 454 AEGVSPADMAKRE------------------RCR-------------------------- 469
Query: 606 ASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
V++ +K + KG+ S G AF EF EH HAL ALR +NNNP
Sbjct: 470 ------VMRDLKGVHGNMKGQ------SLGYAFAEFQEHAHALRALRHINNNP 510
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV---KHAMHRASLEQRRS 57
+VT+KGS RGFGYV F+++ED RA K T+ G KI + K + S E+R++
Sbjct: 35 VVTEKGSKACRGFGYVTFSMLEDVQRA--RKEITTFEGCKINITIAKKKLRNKSKEKRKN 92
>gi|154297435|ref|XP_001549144.1| hypothetical protein BC1G_12314 [Botryotinia fuckeliana B05.10]
Length = 794
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 133/296 (44%), Gaps = 68/296 (22%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAA------ 480
T+FI NLPF + +K+ F FG V V+ + T RPKGTGF+ F V+ A
Sbjct: 352 TLFIRNLPFTTLDATLKEHFEQFGPVRYARVVMDKATDRPKGTGFVCFYNVDDAESCFRN 411
Query: 481 ------TAAVSASK--------------TTSGLGIF-LKGRQLTVLKALDKKLAHDKEID 519
T A + K G + ++GR L + KA++K A +
Sbjct: 412 CPKYQPTGANAIKKGDTPQIKHSLLEPENADSTGAYTIEGRLLQISKAVEKDQAVKLTEE 471
Query: 520 KSK---NETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQ--MLHEKKMTKLQSPNFH 574
S N D R LYL +EG + +GTP + + ++ R+ + KK+ + +P H
Sbjct: 472 GSHFRDNRDKDKRKLYLLQEGTVAKGTPLYDILPPSEVKMREDSAMQRKKLIQ-GNPTLH 530
Query: 575 VSRTRLVIYNLPKSMTEKGLKKLCIDAVV------------------------------- 603
+S TRL I N+P+++ K LK L +AVV
Sbjct: 531 LSLTRLAIRNIPRNIDSKALKALAREAVVGFATDVKAGLRQQLSKEEIARGGEEMREAEK 590
Query: 604 SRASKQKPVIKQIKFLQSLKKGKVDTKHY----SRGVAFVEFTEHQHALVALRVLN 655
R +K K +++Q K + ++GK ++ SRG FVE++ H+ AL+ LR LN
Sbjct: 591 QRKAKGKGIVRQAKVVFEGREGKKVSEESGAGKSRGYGFVEYSSHRWALMGLRWLN 646
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +R++P A + ++FS + + + + T SKG+ FV F DA+ A+ +F
Sbjct: 42 LFVRSLPATATTASLTELFSDNYPLKHATVVLDPVTKQSKGYGFVTFADAEDAQRALDEF 101
Query: 279 NGQKFGKRPIAVDWAVPKN 297
NGQ F R + ++ A P++
Sbjct: 102 NGQSFQGRKMKIEIAQPRS 120
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 7 SNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRA 50
+ + +G+G+V FA EDA RA++ NG S GRK+ ++ A R+
Sbjct: 77 TKQSKGYGFVTFADAEDAQRALDEFNGQSFQGRKMKIEIAQPRS 120
>gi|347841454|emb|CCD56026.1| hypothetical protein [Botryotinia fuckeliana]
Length = 794
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 133/296 (44%), Gaps = 68/296 (22%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAA------ 480
T+FI NLPF + +K+ F FG V V+ + T RPKGTGF+ F V+ A
Sbjct: 352 TLFIRNLPFTTLDATLKEHFEQFGPVRYARVVMDKATDRPKGTGFVCFYNVDDAESCFRN 411
Query: 481 ------TAAVSASK--------------TTSGLGIF-LKGRQLTVLKALDKKLAHDKEID 519
T A + K G + ++GR L + KA++K A +
Sbjct: 412 CPKYQPTGANAIKKGDTPQIKHSLLEPENADSTGAYTIEGRLLQISKAVEKDQAVKLTEE 471
Query: 520 KSK---NETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQ--MLHEKKMTKLQSPNFH 574
S N D R LYL +EG + +GTP + + ++ R+ + KK+ + +P H
Sbjct: 472 GSHFRDNRDKDKRKLYLLQEGTVAKGTPLYDILPPSEVKMREDSAMQRKKLIQ-GNPTLH 530
Query: 575 VSRTRLVIYNLPKSMTEKGLKKLCIDAVV------------------------------- 603
+S TRL I N+P+++ K LK L +AVV
Sbjct: 531 LSLTRLAIRNIPRNIDSKALKALAREAVVGFATDVKAGLRQQLSKEEIARGGEEMREAEK 590
Query: 604 SRASKQKPVIKQIKFLQSLKKGKVDTKHY----SRGVAFVEFTEHQHALVALRVLN 655
R +K K +++Q K + ++GK ++ SRG FVE++ H+ AL+ LR LN
Sbjct: 591 QRKAKGKGIVRQAKVVFEGREGKKISEESGAGKSRGYGFVEYSSHRWALMGLRWLN 646
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +R++P A + ++FS + + + + T SKG+ FV F DA+ A+ +F
Sbjct: 42 LFVRSLPATATTASLTELFSDNYPLKHATVVLDPVTKQSKGYGFVTFADAEDAQRALDEF 101
Query: 279 NGQKFGKRPIAVDWAVPKN 297
NGQ F R + ++ A P++
Sbjct: 102 NGQSFQGRKMKIEIAQPRS 120
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 7 SNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRA 50
+ + +G+G+V FA EDA RA++ NG S GRK+ ++ A R+
Sbjct: 77 TKQSKGYGFVTFADAEDAQRALDEFNGQSFQGRKMKIEIAQPRS 120
>gi|156048606|ref|XP_001590270.1| hypothetical protein SS1G_09035 [Sclerotinia sclerotiorum 1980]
gi|154693431|gb|EDN93169.1| hypothetical protein SS1G_09035 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 753
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 132/297 (44%), Gaps = 68/297 (22%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAA----- 480
+T+FI NLPF + +K+ F FG V V+ + T RPKGTGF+ F VE A
Sbjct: 349 STLFIRNLPFTTLDATLKEHFEQFGPVRYARVVMDKATDRPKGTGFVCFYNVEDADSCFR 408
Query: 481 -------TAAVSASK--------------TTSGLGIF-LKGRQLTVLKALDKKLAHDKEI 518
T A + K G + + GR L + KA++K A
Sbjct: 409 NCPKYQPTGANAIKKGDTPQIKHSLLEPENADSTGAYTIDGRLLQISKAVEKDQAVKLTE 468
Query: 519 DKSK---NETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQ--MLHEKKMTKLQSPNF 573
+ S N D R LYL +EG + +GTP + + ++ R+ + KK+ + +P
Sbjct: 469 EGSHFRDNRDKDKRKLYLLQEGTVAKGTPLYDLLPPSEVKMREDSAMQRKKLIQ-GNPTL 527
Query: 574 HVSRTRLVIYNLPKSMTEKGLKKLCIDAVV------------------------------ 603
H+S TRL I N+P+++ K LK L +A V
Sbjct: 528 HLSLTRLAIRNIPRNIDSKALKALAREAAVGFATDVKEGKRQQLSKEELARGGEEMREAE 587
Query: 604 -SRASKQKPVIKQIKFLQSLKKGKVDTKHY----SRGVAFVEFTEHQHALVALRVLN 655
R +K K +++Q K + ++GK ++ SRG FVE++ H+ AL+ LR LN
Sbjct: 588 KQRKAKGKGIVRQAKVVFEGREGKKVSEESGAGKSRGYGFVEYSSHRWALMGLRWLN 644
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 5/119 (4%)
Query: 196 EIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTG 255
E +G T +++L E + + + L +R++P A + + ++FS + + + + T
Sbjct: 21 ETQGHT--SKKLRKETNASARRSLFVRSLPATATTSALTELFSDNYPLKHATVVLDPVTK 78
Query: 256 LSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKN---IYSSGGAAAGVQNK 311
SKG+ FV F DA+ A+ +FNGQ F R + ++ A P++ I SG V+ K
Sbjct: 79 QSKGYGFVTFADAEDAQRALDEFNGQSFQGRKMKIEIAQPRSRETIAKSGEEGLPVKRK 137
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 7 SNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRA 50
+ + +G+G+V FA EDA RA++ NG S GRK+ ++ A R+
Sbjct: 77 TKQSKGYGFVTFADAEDAQRALDEFNGQSFQGRKMKIEIAQPRS 120
>gi|452003351|gb|EMD95808.1| hypothetical protein COCHEDRAFT_1190998 [Cochliobolus
heterostrophus C5]
Length = 756
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 131/296 (44%), Gaps = 67/296 (22%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVE-------- 478
T+F+ N+PF +D+E +K+ F FG + V+ + T+RPKGT F+ F T E
Sbjct: 318 TVFVRNVPFTVDDERLKEHFQQFGGIRYARVVVDRDTERPKGTAFVAFFTEEDMVNCLKG 377
Query: 479 -------------------AATAAVSASKTTSGLGIF-LKGRQLTVLKALDKKLAHDKEI 518
T +V + G + + GR L + +A+DK A
Sbjct: 378 VPRVKLQKKDLNKSDGSTITVTHSVLEDEDADPTGRYTIDGRILQISRAVDKNEASRLTA 437
Query: 519 DKSKNETN---DHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQ-SPNFH 574
+ + + N D R LYL EG I +P + +S ++ R+ + ++Q +P+ H
Sbjct: 438 EGAASRFNRDKDKRRLYLLSEGTISSNSPLYQKLSPSEIKMREESATMRRKQIQENPSLH 497
Query: 575 VSRTRLVIYNLPKSMTEKGLKKLCIDAVVS------------------------------ 604
+S TRL + N+P+S+T K LK+L AVV
Sbjct: 498 LSLTRLSVRNIPRSITSKDLKQLARSAVVGFAADVKAGKRQKLSKEEVIRGGQEMLVAEK 557
Query: 605 -RASKQKPVIKQIKFLQSLKKG-KVDTKH---YSRGVAFVEFTEHQHALVALRVLN 655
R K K ++KQ K + G KV + SRG F+E+ H++AL+ LR LN
Sbjct: 558 MRKKKGKGIVKQAKVVFETPAGSKVPEETGAGRSRGYGFIEYYTHRNALMGLRWLN 613
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 34/179 (18%)
Query: 177 VLYTTVKSACASVALLHQKEIKGGTV-----WARQLGGEGSK-----------------T 214
V + V+ A + L+ +IKG + ARQ GE +
Sbjct: 88 VTFADVEDAQRAKEELNNTQIKGKKIKVDFAEARQREGEEKRPRAADRIKAEREQQVKEA 147
Query: 215 QKWKLIIRNIPFKAKVNE-IKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAES 273
Q K+I+RN+P+ K E ++ +F G V +P + L +GF FV K++AE
Sbjct: 148 QVPKIIVRNLPWTIKTPEDLEKLFRSYGKVNFANLPKKPNGEL-RGFGFVSLRGKKNAEK 206
Query: 274 AIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETA 332
A+Q+ NG++ RPIAVDWAV ++ + + + +GD +D GD+D E A
Sbjct: 207 AMQELNGKEISGRPIAVDWAVDRDTWLN---LQKTEQEGDAKAD-------GDEDMEDA 255
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASL-EQRRSKV 59
+V K + E +G+G+V FA +EDA RA E N T + G+KI V A R E++R +
Sbjct: 73 VVLDKETRESKGYGFVTFADVEDAQRAKEELNNTQIKGKKIKVDFAEARQREGEEKRPRA 132
Query: 60 TQEVQAE 66
++AE
Sbjct: 133 ADRIKAE 139
>gi|119501270|ref|XP_001267392.1| ribosome biogenesis (Nop4), putative [Neosartorya fischeri NRRL
181]
gi|119415557|gb|EAW25495.1| ribosome biogenesis (Nop4), putative [Neosartorya fischeri NRRL
181]
Length = 732
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 137/306 (44%), Gaps = 69/306 (22%)
Query: 419 EGEDELQN-TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTV 477
E EDE TIFI NLPF +E + + F+ FG + V+ T+RP+GTGF+ F V
Sbjct: 309 EKEDERNACTIFIRNLPFTCTDETLYEHFTQFGPLRYARIVVDLETERPRGTGFVCFWKV 368
Query: 478 EAATAAVSAS---------------KTTSGL-------------GIF-LKGRQLTVLKAL 508
E A V + K+++ L G + L GR L V +A+
Sbjct: 369 EDAALCVREAPKQQDTLIAEKDKGKKSSTALKHSILQNENSDPSGRYTLDGRVLQVARAV 428
Query: 509 DKKLAHDKE---IDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKM 565
K A E + K D R L+L +EG I + + +S ++ R+ +++
Sbjct: 429 SKSQAAKLEEEGVSKRLVRDTDKRRLFLLQEGTISPNSSLYQKLSPSEIKMREDSFKQRQ 488
Query: 566 TKLQ-SPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS-------------------- 604
++ +P H S TRL + N+P+ +T K LK+L AVV
Sbjct: 489 NFIRKNPALHFSLTRLSVRNIPRHVTSKDLKQLARQAVVGFAKDVKEGQRQPLSKEELAR 548
Query: 605 -----------RASKQKPVIKQIKFLQSLKKG-KVDTKH---YSRGVAFVEFTEHQHALV 649
R SK K ++KQ K + ++G K++ K SRG F+E+ H+HAL+
Sbjct: 549 SADAMKEAEEYRKSKGKGIVKQAKIVFESREGSKINEKSGAGRSRGYGFIEYYTHRHALM 608
Query: 650 ALRVLN 655
LR LN
Sbjct: 609 GLRWLN 614
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 49/84 (58%)
Query: 214 TQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAES 273
T + L +R++P A + + FS ++ + + ++ +T L KG+ FV F DA++
Sbjct: 39 TPRRTLFVRSLPTSATTESLTEYFSQSYVIKHAIVVNDPETKLCKGYGFVTFADLEDAQA 98
Query: 274 AIQKFNGQKFGKRPIAVDWAVPKN 297
A+++FNG F + I VD+A P++
Sbjct: 99 ALKEFNGSVFEGKTIRVDYAQPRH 122
>gi|367026828|ref|XP_003662698.1| hypothetical protein MYCTH_2303648 [Myceliophthora thermophila ATCC
42464]
gi|347009967|gb|AEO57453.1| hypothetical protein MYCTH_2303648 [Myceliophthora thermophila ATCC
42464]
Length = 802
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 127/288 (44%), Gaps = 54/288 (18%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVE-------- 478
TIFI NLP+ +E +K F+ FG V V+ + T++P GTGF+ F E
Sbjct: 365 TIFIRNLPYSTTDETLKAHFTRFGRVRYARVVMDRTTEKPAGTGFVCFVREEDFKACLKG 424
Query: 479 ---------AATAAVSASKTTSGLGIF-LKGRQLTVLKALDKKLAHDKEIDKSKNETNDH 528
A +V +T G + L GR L V +A+ K A + D
Sbjct: 425 APRHKPAPMLAKHSVLQDETADPEGNYTLDGRVLQVTQAVSKDEAARLAEESKGRRKEDK 484
Query: 529 RNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQS-PNFHVSRTRLVIYNLPK 587
R L+L EG I +P ++ ++ R+ +++ ++S P+ H+S TRL + N+P
Sbjct: 485 RRLFLLSEGAITPKSPLYSKLTPAEIKMREASAKQRKKLIESNPSLHLSLTRLAVRNIPH 544
Query: 588 SMTEKGLKKLCIDAVVSRA-------------------------------SKQKPVIKQI 616
S++ K LK L A+V A K K V++Q
Sbjct: 545 SLSSKDLKALARRAIVEFAKDVKEGRRLPISKEERERGGEADREAERRRREKGKGVVRQA 604
Query: 617 KFLQSLKKG-KVDTKH---YSRGVAFVEFTEHQHALVALRVLNNNPSK 660
K + +G KVD K SRG F+E+ H+ AL+ LR LN +P K
Sbjct: 605 KIVFETAQGSKVDEKTGGGRSRGYGFIEYWSHRRALMGLRYLNGHPLK 652
>gi|156083423|ref|XP_001609195.1| RNA binding protein [Babesia bovis T2Bo]
gi|154796446|gb|EDO05627.1| RNA binding protein, putative [Babesia bovis]
Length = 806
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 123/492 (25%), Positives = 205/492 (41%), Gaps = 112/492 (22%)
Query: 211 GSKTQKW-KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKR 269
G KT + ++ ++N+PF V ++ + V++P KGFAF++FT
Sbjct: 309 GVKTSRAGRVFVQNLPFNTSVKHLEALAHTFDKGATVHMPGGDK---KKGFAFIQFTNAN 365
Query: 270 DAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDA 329
A AI + NG +F R I + A+P IY+ + +GD +DD+ D+
Sbjct: 366 VANKAILRLNGSEFRGRNIRLTMALPTEIYADKPKTS----EGDH-----PEDDIDPDND 416
Query: 330 ETASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDS 389
E D+ SNAD D + T SL++D
Sbjct: 417 EHEGSDT---------SNADLD--------------AATEEGKSLNED------------ 441
Query: 390 DKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAF 449
TVN L+ D+ Q TIF+ NL ++ +++ F+ F
Sbjct: 442 --TVN--------------------LESNSSADQQQRTIFVRNLSYESTESGLREYFNTF 479
Query: 450 GEVVSFVPVLHQVTKRPKGTGFLKFKTVE-------------------AATAAVSASKT- 489
G V S + + +GT F+ FK V+ A +A S S+
Sbjct: 480 GAVES-CKICKDSSGGSRGTAFIMFKNVDDARKVLDLEELALERDAEFARSAETSRSRVK 538
Query: 490 ---TSGLGIFLKGRQLTVLKALDKKLAHD--KEIDKSKNETNDHRNLYLAKEGLILEGTP 544
+GLG L GR+L + A+ ++ A K K E ++ ++ L EG+ILE +P
Sbjct: 539 LSKAAGLGFSLNGRRLKLSSAISREEASTLKKREPAPKEEFSNKKHSELLMEGVILETSP 598
Query: 545 AAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS 604
+ ++ + ++K+ K+++PN V+ RL I NLP ++ L + I +
Sbjct: 599 EFQNLTPAQKKLQLDSWKEKVEKMKNPNMFVNPKRLCIRNLPNNVDVNNL-RTAIASHFR 657
Query: 605 RASKQKPVIKQIKFLQSLKKGKV-----DTKHYSRG---------VAFVEFTEHQHALVA 650
++ K + K + GKV D + + G AF++F + + AL A
Sbjct: 658 KSVDLKKLYGTAKVDATRTIGKVTLLSDDKRKVTSGDTVMRRRKPFAFIDFDKEELALSA 717
Query: 651 LRVLNNNPSKLF 662
LR L+NN S+LF
Sbjct: 718 LRYLSNN-SELF 728
>gi|146096902|ref|XP_001467971.1| putative RNA-binding protein [Leishmania infantum JPCM5]
gi|398021090|ref|XP_003863708.1| RNA-binding protein, putative [Leishmania donovani]
gi|134072337|emb|CAM71043.1| putative RNA-binding protein [Leishmania infantum JPCM5]
gi|322501941|emb|CBZ37024.1| RNA-binding protein, putative [Leishmania donovani]
Length = 448
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 133/302 (44%), Gaps = 79/302 (26%)
Query: 422 DELQNTIFICNLPFDLDNEEVKQRF-SAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAA 480
D L+ +F+ NLP D EE+ F + F V + V ++ +K GTGF+ + E A
Sbjct: 108 DPLETQLFLKNLPLDTSEEELMTYFKTHFSAVKRVLLVRNRASKTLSGTGFVHCGSAELA 167
Query: 481 ----TAAVSASKTTSGLG----------------------------------IFLKGRQL 502
A ++ S +G + ++ +
Sbjct: 168 GKIFDYAQQNARELSAVGREDMKAQTESLSHHQAKRLMHKMRTDSFVVRDPFLTMRDTRF 227
Query: 503 TVLKALDKK------LAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEG-------- 548
TVL+ L + A K+ ++K +D RNLYL +EGL++ G+ AA+G
Sbjct: 228 TVLRVLSRSDTQEAVSAQQKKKKRTKVAADDPRNLYLLQEGLVVPGSAAAKGLHPRYLQM 287
Query: 549 VSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASK 608
+ DD +++Q +L + N+ VS+TRL + NLP++M+E +++L + + K
Sbjct: 288 IEDDYAARKQ--------QLTNSNYFVSKTRLSVRNLPRTMSENDMRRLFAEQARAYLKK 339
Query: 609 QKP-----------VIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNN 657
I+ +K L+ DT SRG F+EF H AL LR+LNNN
Sbjct: 340 HPEDTEKDKWGKYGPIRNVKLLK-------DTAGVSRGYGFIEFVNHNVALNTLRMLNNN 392
Query: 658 PS 659
P+
Sbjct: 393 PT 394
>gi|115398367|ref|XP_001214775.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192966|gb|EAU34666.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 701
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 135/299 (45%), Gaps = 68/299 (22%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T+FI NLPF D+E + + F+ FG + V+ T+RP+GTGF+ F E A A V
Sbjct: 289 TVFIRNLPFTCDDEMLYEHFTQFGNLRYARIVVDHETERPRGTGFVCFWKAEDAAACVRD 348
Query: 487 S---------------KTTSGL-------------GIF-LKGRQLTVLKALDKKLAHDKE 517
S K ++ + G + L+GR L V +A+ K A E
Sbjct: 349 SPKQQDPVVAEKEKSKKASTAMKHSVLQNENADPTGRYTLEGRVLQVSRAVSKSRAAQLE 408
Query: 518 ---IDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL-QSPNF 573
+ + D R L+L EG I +P + +S ++ R+ ++++ + ++P
Sbjct: 409 EEGVSRRLVRDTDKRRLFLLSEGTIPRNSPLYQKLSPSEVKMREDSYKQRQNFIKKNPAL 468
Query: 574 HVSRTRLVIYNLPKSMTEKGLKKLCIDAVV-------------------SRAS---KQKP 611
H+S TRL I N+P+ +T K LK+L AVV RAS K+
Sbjct: 469 HLSLTRLSIRNIPRHVTSKDLKQLARQAVVGFAKDVSAGIREPLSKDELQRASDEMKEAE 528
Query: 612 VIKQIKFLQSLKKGKV-------------DTKHYSRGVAFVEFTEHQHALVALRVLNNN 657
+++ K L +++ K+ SRG F+E+ H+HAL+ LR LN +
Sbjct: 529 RLRKKKGLGVVRQAKIVFEGRDGSKVAEDSGAGRSRGYGFIEYFTHRHALMGLRWLNGH 587
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 215 QKWKLIIRNIPFKAK-VNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAES 273
Q KLI+RN+P+ K +++ +F G V +P G GF FV K++AE
Sbjct: 131 QPPKLIVRNLPWSIKEPDDLAVLFRSFGKVKQATLPKKG--GQLAGFGFVILRGKKNAEK 188
Query: 274 AIQKFNGQKFGKRPIAVDWAVPKNIY 299
A+ NG++ R +AVDWAV K ++
Sbjct: 189 ALAAVNGKEVDGRTLAVDWAVEKKVW 214
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +R++P + + FS ++ + + +T SKG+ FV F DA++A++++
Sbjct: 22 LFVRSLPASTTTESLTEYFSQSYVIKHALAVLDPETKKSKGYGFVTFADVDDAKAALEEY 81
Query: 279 NGQKFGKRPIAVDWAVPKN 297
NG F + I VD+A P++
Sbjct: 82 NGSVFEGKKIKVDYAQPRH 100
>gi|281211929|gb|EFA86091.1| hypothetical protein PPL_01328 [Polysphondylium pallidum PN500]
Length = 923
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 137/274 (50%), Gaps = 47/274 (17%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T+FI N+ FD E+++++FS FG++ VL T++P G F+K+ +A AA+ A
Sbjct: 480 TLFIRNVSFDTTQEDLEKKFSEFGKLKFCRLVLDPTTEKPTGKAFVKYLAENSANAALEA 539
Query: 487 SKTTSGL---------------------------------GIFLKGRQLTVLKALDKKLA 513
+K T+ GI + GR L V A+D
Sbjct: 540 AKVTNLFDPTKDLSDNKNAEKQRAKMEKKQDFSLSTLLQGGIMVHGRNLIVDVAVD---- 595
Query: 514 HDK--EIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQ-S 570
H+K E+ ++ D +N L G +L+ + + ++ D + R + + KL+ +
Sbjct: 596 HEKAGELKDNRVAKVDKKNKALLLVGKVLQQSELGQLFTEKDWNMRSVADREANYKLKVN 655
Query: 571 PNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVDT- 629
PN++VS TRL NLP S+++K LK C A+ ++++K K ++ ++ K +V+
Sbjct: 656 PNYYVSPTRLCFRNLPLSVSDKQLKLACQKALKAKSNKSKIFFAKV----AVDKERVNAN 711
Query: 630 -KHYSRGVAFVEFTEHQHALVALRVLNNNPSKLF 662
K S+G FVEF +HQ AL + LNN+ +K+F
Sbjct: 712 GKAKSKGYGFVEFEDHQAALDVIHSLNNS-TKVF 744
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIP-HNTDTG---LSKGFAFVKFTCKRDAESA 274
L+IRN+ F + ++ + + F G + V +P TD G +SKGFAFV F+ + A++A
Sbjct: 246 LVIRNLNFTSNISHVNESFKKFGQILWVKVPTKQTDAGNQQVSKGFAFVLFSSRDSAQNA 305
Query: 275 IQKFNGQKFGKRPIAVDWAVPKNIYSS 301
+ + NG+ R IA+DWA+P+ Y S
Sbjct: 306 MDQLNGKPLNGRNIAIDWAIPQEAYKS 332
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYI-PHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
++ I N+PF K EI++ FS VG + +I D G AF+ F A+ AI+
Sbjct: 10 QIFISNLPFDTKKEEIEEFFSEVGPIKRSFIVTKKDDKTKCTGNAFLWFALADHAKEAIK 69
Query: 277 KFNGQKFGKRPIAVDWAVPK 296
FN +KF R I V+ A PK
Sbjct: 70 SFNNKKFKNRSIKVEQAKPK 89
>gi|224160392|ref|XP_002338204.1| predicted protein [Populus trichocarpa]
gi|222871276|gb|EEF08407.1| predicted protein [Populus trichocarpa]
Length = 107
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/93 (63%), Positives = 65/93 (69%), Gaps = 16/93 (17%)
Query: 565 MTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKK 624
MTKLQSPNFHV +YNLPKSMTEK LKKL IDAV SRA++QKPV +Q K+
Sbjct: 1 MTKLQSPNFHV------VYNLPKSMTEKQLKKLFIDAVTSRATEQKPVTQQ------YKE 48
Query: 625 GK-VDTKHYSRGVAFVEFTEHQHALVALRVLNN 656
GK D +S GVAFVE T HQH LVA RV NN
Sbjct: 49 GKGCD---HSWGVAFVELTVHQHVLVAPRVPNN 78
>gi|378729309|gb|EHY55768.1| hypothetical protein HMPREF1120_03892 [Exophiala dermatitidis
NIH/UT8656]
Length = 784
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 135/521 (25%), Positives = 212/521 (40%), Gaps = 106/521 (20%)
Query: 212 SKTQKWKLIIRNIPFKAK-VNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRD 270
++ Q +LI+RN+P+ K +++ +F G V + +P + GF V K++
Sbjct: 163 AEVQPPRLIVRNLPWSIKDGDDLAALFRSYGKVKHAVVPKKGPR-VQYGFGIVVLRGKKN 221
Query: 271 AESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDD--- 327
AE AI NG+ R +AVDWAV K + Q G ++ S+ + G+
Sbjct: 222 AEKAIAGVNGKVVDGRTLAVDWAVDKQTWEELQQQQQQQQGGTTDTRQASEAEEGNKVQD 281
Query: 328 ----DAETASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKG 383
D TAS+ ++S E+ D EE I + S GS +SD+ +
Sbjct: 282 NAKADGITASEGADSDEE-------DLQEEEHI-HDDDDTDASDDGSDEDVSDELDAEEE 333
Query: 384 NKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVK 443
N E S+ +E + D +T+FI NLPF D++ +K
Sbjct: 334 NDEDLSEAESDEGDRNRDTRN--------------------DSTVFIRNLPFTADDDILK 373
Query: 444 QRFSA-FGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLG-------- 494
+ FS FG V V +R +GT F+ F E A V + G
Sbjct: 374 EHFSQHFGPVRYARVVYDPEIERSRGTAFVCFFNQEDAKECVKNAPKHESPGDKAADNNS 433
Query: 495 -----------------------IFLKGRQLTVLKALDKKLAHDKEIDKSK---NETNDH 528
L GR L V +AL ++ A+ + + S+ D
Sbjct: 434 KKRKAETLKHSILQNEASDPSGKYTLDGRVLQVSRALSREDANQRASEASEKRDIRDRDK 493
Query: 529 RNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQS-PNFHVSRTRLVIYNLPK 587
R LYL EG I + + E + ++ R+ ++ ++S PN +S TRL + N+P+
Sbjct: 494 RRLYLLSEGSISKSSKLYELLGKAEIDIRETSQRQRQRLIKSNPNLCLSLTRLSVRNIPR 553
Query: 588 SMTEKGLKKLCIDAVVSRA-----------SKQ--------------------KPVIKQI 616
+ K LK L +AVV A SK+ K ++KQ
Sbjct: 554 GIGSKELKALAREAVVGFAKDVKEGLRQPLSKEELKRGGEEMREAERRRKLAGKGIVKQA 613
Query: 617 KFLQSLKKG-KV-DTKHYSRGVAFVEFTEHQHALVALRVLN 655
K + K+G KV + SRG F+E+ H++AL LR LN
Sbjct: 614 KVVFENKEGSKVKEGAGRSRGYGFIEYVTHRNALAGLRWLN 654
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 47/98 (47%)
Query: 212 SKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDA 271
+K + L +R++P + + FS + + + + + T +S+GF FV F D
Sbjct: 42 TKDHRRSLFVRSLPASVTTERLTEFFSELFPIKHATVVLDPQTKVSRGFGFVTFVDAEDT 101
Query: 272 ESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQ 309
++A+ +FN R I V+ A ++ + A AG +
Sbjct: 102 QAALAQFNNAVLDGRKIKVEIAEARHRDTEDAAVAGAE 139
>gi|45200847|ref|NP_986417.1| AGL250Wp [Ashbya gossypii ATCC 10895]
gi|44985545|gb|AAS54241.1| AGL250Wp [Ashbya gossypii ATCC 10895]
Length = 729
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 129/287 (44%), Gaps = 61/287 (21%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+P+D E ++ FS FG V +PV + T PKGT F+ FK V+
Sbjct: 289 SVFVRNVPYDATQETLEAHFSKFGPVKYALPVQDKETGLPKGTAFVAFKDESTFDTCVAN 348
Query: 487 SKTTSGLGIFL----------KGRQLTVLKALDKKLAH---DKEIDKSKN------ETND 527
+ + + +GR L + LD++ A+ +K K K D
Sbjct: 349 APVVDSKSLLISDDVAPEYVYEGRILAITPTLDRETANRISEKNAVKRKEALGIAPSERD 408
Query: 528 HRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL-QSPNFHVSRTRLVIYNLP 586
RNLYL EG I + A+ +S D+ R+ + ++ +L ++P H+S RL + N+P
Sbjct: 409 KRNLYLLNEGRISTNSKLAQLMSKTDLEVREKSYAQRTEQLKKNPELHLSMRRLAVRNIP 468
Query: 587 KSMTEKGLKKLCIDAVV-------------------SRAS-------------------K 608
++M E LK L AVV SR++ K
Sbjct: 469 RAMGEAALKILARKAVVEFAKEVKEGKRHSLSKEEISRSTWDKYRSMTEEEIEAQKKKDK 528
Query: 609 QKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLN 655
++ ++KQ K ++ +K V S+G F+E+ +H+ AL+ LR LN
Sbjct: 529 KRGLVKQAKIIKEVKGSVVGR---SKGYGFIEYRDHKAALMGLRWLN 572
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +RNIPF A E+ D FS + + I + + G S+GF FV F + D ++A+ K
Sbjct: 18 LFVRNIPFDATDAELTDFFSQFAPIKHAVIVKD-NAGSSRGFGFVSFAVESDTQAALDKG 76
Query: 279 NGQKFGKRPIAVDWA 293
+F R + VD A
Sbjct: 77 RKTQFKGRLLRVDVA 91
>gi|374109662|gb|AEY98567.1| FAGL250Wp [Ashbya gossypii FDAG1]
Length = 729
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 129/287 (44%), Gaps = 61/287 (21%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+P+D E ++ FS FG V +PV + T PKGT F+ FK V+
Sbjct: 289 SVFVRNVPYDATQETLEAHFSKFGPVKYALPVQDKETGLPKGTAFVAFKDESTFDTCVAN 348
Query: 487 SKTTSGLGIFL----------KGRQLTVLKALDKKLAH---DKEIDKSKN------ETND 527
+ + + +GR L + LD++ A+ +K K K D
Sbjct: 349 APVVDSKSLLISDDVAPEYVYEGRILAITPTLDRETANRISEKNAVKRKEALGIAPSERD 408
Query: 528 HRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL-QSPNFHVSRTRLVIYNLP 586
RNLYL EG I + A+ +S D+ R+ + ++ +L ++P H+S RL + N+P
Sbjct: 409 KRNLYLLNEGRISTNSKLAQLMSKTDLEVREKSYAQRTEQLKKNPELHLSMRRLAVRNIP 468
Query: 587 KSMTEKGLKKLCIDAVV-------------------SRAS-------------------K 608
++M E LK L AVV SR++ K
Sbjct: 469 RAMGEAALKILARKAVVEFAKEVKEGKRHSLSKEEISRSTWDKYRSMTEEEIEAQKKKDK 528
Query: 609 QKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLN 655
++ ++KQ K ++ +K V S+G F+E+ +H+ AL+ LR LN
Sbjct: 529 KRGLVKQAKIIKEVKGSVVGR---SKGYGFIEYRDHKAALMGLRWLN 572
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +RNIPF A E+ D FS + + I + + G S+GF FV F + D ++A+ K
Sbjct: 18 LFVRNIPFDATDAELTDFFSQFAPIKHAVIVKD-NAGSSRGFGFVSFAVESDTQAALDKG 76
Query: 279 NGQKFGKRPIAVDWA 293
+F R + VD A
Sbjct: 77 RKTQFKGRLLRVDVA 91
>gi|449282696|gb|EMC89507.1| RNA-binding protein 28, partial [Columba livia]
Length = 522
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 104/227 (45%), Gaps = 27/227 (11%)
Query: 432 NLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTS 491
NL F+ + E + + FG++ VLH T+RPKG F +F T EAA V A++
Sbjct: 210 NLSFETEEEALGETLQQFGDLKYVRLVLHPDTERPKGCAFAQFLTQEAAQKCVQAAQEDG 269
Query: 492 GLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSD 551
G L S + + + +I GT AAEGVSD
Sbjct: 270 EAVSVTPGGSLV-----------------SPHPSKPPISPQFPPPAVIRAGTKAAEGVSD 312
Query: 552 DDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKP 611
DM+KR E K KL+ N VS TRL ++NLPK+ +D+V R+ +
Sbjct: 313 ADMAKRARFEELKHQKLRDQNIFVSPTRLCVHNLPKA----------VDSVRLRSLLLRL 362
Query: 612 VIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
+ + + + + + +S G AFV F H+ AL ALR LNNNP
Sbjct: 363 LGRDTRVTECRVMREQRGQGHSLGFAFVGFGAHEQALAALRSLNNNP 409
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAV 290
++++ +FSP G + V IP D G +GFAFV+F +A A++ N + RP+AV
Sbjct: 5 DDLRSLFSPFGTILEVNIPKKPD-GKMRGFAFVQFQKVLEAAKALRGMNMRDIKGRPVAV 63
Query: 291 DWAVPKNIYSS 301
DWAV K+ Y +
Sbjct: 64 DWAVAKDKYQA 74
>gi|392575547|gb|EIW68680.1| hypothetical protein TREMEDRAFT_44501 [Tremella mesenterica DSM
1558]
Length = 938
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 127/308 (41%), Gaps = 76/308 (24%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKF-KTVEAATAAV 484
+T+FI NLPF++ +E+ F +FG + L + T R +GTGF+ F KT A A
Sbjct: 428 STLFIRNLPFEVTEQELNTLFRSFGPLRYAKITLDKTTGRSRGTGFVCFWKTEHADKALE 487
Query: 485 SASKTTSGLG------------------------------IFLKGRQLTVLKALDKKLAH 514
A K G + L GR L + +A+ ++ A
Sbjct: 488 EAEKVAQETGTNAIPLGGDKNPFSLPSVLTADPSSSLASRLVLHGRTLELSRAVTREEAG 547
Query: 515 D-KEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQS-PN 572
KE + D RN YL +EG++ +PAA + ++ KRQ + L+S P+
Sbjct: 548 QIKEDGERARHQGDKRNTYLMREGVLFPNSPAAATLPAAELEKRQASFNARKALLRSNPS 607
Query: 573 FHVSRTRLVIYNLPKSMTEKGLKKLCIDAV---------VSRAS---------------- 607
++S+TRL I LP T++ LK+L I AV SRA
Sbjct: 608 LYISKTRLSIRQLPLFATDRTLKRLAIHAVRTFDTEVASSSRAPLSRTEESDESLSPALA 667
Query: 608 ------------------KQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALV 649
+Q PVI+ Q+ K + K S+G F+E H+ AL
Sbjct: 668 AREANKDKEKAKGKGKGERQTPVIQSKIVRQTDKLDPITEKGRSKGYGFLEMRSHKDALK 727
Query: 650 ALRVLNNN 657
LR NNN
Sbjct: 728 VLRWANNN 735
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 146/362 (40%), Gaps = 89/362 (24%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVG--GRKIGVKHAMHRASLEQRRSK 58
+ T K + + +G GYV +++ EDA AV+ +G+ G GRKI V+ A R ++R +K
Sbjct: 59 IATDKTTGKSKGVGYVTYSLKEDAETAVKELDGSEFGDKGRKIRVEWADKRPPPKERAAK 118
Query: 59 VTQEVQAEDIEKTMDNKDGVISGAEKHSSK-LLESGKTVKPRKAATLGIDLADKEDCSQK 117
ISGA+ +++ ++ES D A
Sbjct: 119 -------------------EISGAKARAARPVIES-------------TDPA-------- 138
Query: 118 QRVARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAV 177
RT+++ GL + + + +P+ EG +D + +
Sbjct: 139 --AIRTLVLTGLPKELEKNVLWKKVRKTDERIQLEHPV------------EGA-VDTAHL 183
Query: 178 LYTTVKSACASVALLHQKEIKGGT---VWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIK 234
++ + A ++ LH KG V ++L G + +LI+RN+ + +++
Sbjct: 184 VFPSHADALKAIPKLHGHTYKGSILSCVLKKRLEKLGKTSHAGRLIVRNLSWDTTEQDLR 243
Query: 235 DMFSPVGLVWNV-------YIPHNTDTG----LSKGFAFVKFTCKRDAESAIQKFNGQKF 283
F P G + ++ +P N D ++GFAFV F K DAE AIQ NG+
Sbjct: 244 ATFLPYGPIQSIDLPTLPSKLPSNPDKAPPPPRARGFAFVWFLSKADAERAIQGVNGKSI 303
Query: 284 GK----------------RPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDD 327
K R +AVDWA+ K + A + K + + GS D D
Sbjct: 304 AKAGSQVKGKINDGEKEARKVAVDWALSKEKWDEAQKTADPE-KAEAEDNQGSASDSSDG 362
Query: 328 DA 329
DA
Sbjct: 363 DA 364
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + ++PF A ++ FS +G V + +I + TG SKG +V ++ K DAE+A+++
Sbjct: 30 IFVSSLPFSATTTDLLTHFSFLGPVRHGFIATDKTTGKSKGVGYVTYSLKEDAETAVKEL 89
Query: 279 NGQKFGK--RPIAVDWA 293
+G +FG R I V+WA
Sbjct: 90 DGSEFGDKGRKIRVEWA 106
>gi|340905324|gb|EGS17692.1| putative nucleolar protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 834
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 130/293 (44%), Gaps = 64/293 (21%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
TIF+ NLP+ +E +K F+ FG V V+ + T +P GTGF+ F+ ++ A +
Sbjct: 396 TIFVRNLPYTTTDETLKAHFTRFGPVRYARVVIDKTTDKPAGTGFVCFRNIQDCKACIRG 455
Query: 487 SKTTSGLGIF-------------------LKGRQLTVLKALDKKLAHDKEIDKSKNETND 527
+ + L+GR L+V +A+ K A +K K + D
Sbjct: 456 APRPQAPVLLKAKHSVLQDELADPTGNYTLEGRILSVAQAVSKDEAQRLAEEKPKKKKED 515
Query: 528 HRNLYLAKEGLILEGTPAAEGVSDDDMSKRQM-LHEKKMTKLQSPNFHVSRTRLVIYNLP 586
R L+L EG+I +P + ++ ++ R+ L ++K +P H+S TRL + N+P
Sbjct: 516 KRRLFLLSEGVITPKSPLYKLLTPAEIKMREASLRQRKKLIESNPALHLSLTRLAVRNIP 575
Query: 587 KSMTEKGLKKLCIDAVVS-------------------------------RASKQKPVIKQ 615
++T K LK L A+V R +K K V+KQ
Sbjct: 576 TNLTSKDLKALARQAIVGFAKDVKEGKRQPLSQEEMTRGGDADREAERRRKAKGKGVVKQ 635
Query: 616 IKFL-QSLKKG-KVDTKHY-----------SRGVAFVEFTEHQHALVALRVLN 655
K + ++ K G KVD K SRG F+E+ H+ AL+ LR LN
Sbjct: 636 AKIVFETAKDGSKVDEKKVAKSTGAAAGIRSRGYGFIEYYSHRRALMGLRWLN 688
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%)
Query: 213 KTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAE 272
+T+ +L +R++P A ++ + FS V + + + T S+GF FV FT DA
Sbjct: 42 RTETRQLFVRSLPPTATSEKLTEFFSQYYPVKHATVVLDPKTKESRGFGFVAFTDPDDAL 101
Query: 273 SAIQKFNGQKFGKRPIAVDWAVPKN 297
A +K F R + +D A P++
Sbjct: 102 EAKEKLQNFYFEGRHLKLDIAHPRH 126
>gi|157874233|ref|XP_001685604.1| putative RNA-binding protein [Leishmania major strain Friedlin]
gi|68128676|emb|CAJ08808.1| putative RNA-binding protein [Leishmania major strain Friedlin]
Length = 447
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 134/301 (44%), Gaps = 78/301 (25%)
Query: 422 DELQNTIFICNLPFDLDNEEVKQRF-SAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAA 480
D L+ +F+ NLP D EE+ F + F V + V ++ +K GTGF+ + E A
Sbjct: 108 DPLETQLFLKNLPLDTSEEELMTYFKTHFSAVKRVLLVRNRASKTLSGTGFVHCGSAELA 167
Query: 481 ----TAAVSASKTTSGLG----------------------------------IFLKGRQL 502
A ++ S +G + ++ +
Sbjct: 168 GKIFDYAQQNARELSAVGREDMKAQTGSLSHHQAKRLMHKMRTHSFVARDPFLTIRDTKF 227
Query: 503 TVLKALDKK-----LAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEG--------V 549
TVL+ L + ++ ++ ++K +D RNLYL +EGL+L G+ AA+G +
Sbjct: 228 TVLRVLSRSDTQEAVSAQQKKKRTKVAADDPRNLYLLQEGLVLPGSAAAKGLHPRYLQMI 287
Query: 550 SDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQ 609
DD +++Q +L + N+ VS+TRL + NLP++M+E +++L + + K
Sbjct: 288 EDDYAARKQ--------QLTNSNYFVSKTRLSVRNLPRTMSENDMRRLFAEQARAYLKKH 339
Query: 610 KP-----------VIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
I+ +K L+ DT SRG F+EF H A+ LR+LNNNP
Sbjct: 340 PEDTEKDKWGKYGPIRNVKLLK-------DTAGVSRGYGFIEFVNHNVAINTLRMLNNNP 392
Query: 659 S 659
+
Sbjct: 393 T 393
>gi|58262520|ref|XP_568670.1| hypothetical protein CNN01920 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134119016|ref|XP_772012.1| hypothetical protein CNBN1890 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254616|gb|EAL17365.1| hypothetical protein CNBN1890 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230844|gb|AAW47153.1| hypothetical protein CNN01920 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 999
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 129/311 (41%), Gaps = 78/311 (25%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFK--------TV 477
+T+FI NLPF+ E+ F +FG + + + T R +GTGF+ F
Sbjct: 420 STLFIRNLPFETTELELNTLFRSFGPLRYAKITIDKATGRSRGTGFVCFWKNEHADEVIE 479
Query: 478 EAATAAVSASKTTSGLG-------------------------IFLKGRQLTVLKALDKKL 512
EA A+ + LG + L GR L + +A+ ++
Sbjct: 480 EAQRVAMETGANSIPLGGAAPKNPFALPSLLTADPSSSLASRLVLHGRTLDITRAVTRET 539
Query: 513 AHDKEIDKSK-NETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQM-LHEKKMTKLQS 570
A + D + D RN YL +EG+I +PAAEG+ + ++ KRQ + +K +
Sbjct: 540 ASQMKEDTERLRNAADKRNTYLMREGVIFPNSPAAEGLPESEIEKRQASFNSRKALLRGN 599
Query: 571 PNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAV--------------VSRA---------- 606
P+ ++S+TRL I LP T++ LK+L I AV ++RA
Sbjct: 600 PSLYISKTRLSIRQLPLFATDRTLKRLAIHAVKAFDKEVADGEREGLARAEEMDGTMSSA 659
Query: 607 -------------------SKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHA 647
++ VI+ Q+ K V + S+G F+E H+ A
Sbjct: 660 IAARGDKSGGKGKGKGGKKERETAVIQSKIVRQTEKLDPVTGQGRSKGYGFLEMRSHKDA 719
Query: 648 LVALRVLNNNP 658
L LR NNNP
Sbjct: 720 LKVLRWANNNP 730
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 140/329 (42%), Gaps = 78/329 (23%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGG--RKIGVKHAMHRASLEQRRSK 58
+ T + S + +G GYV F++ EDA+RA++ +G S GG RKI VK A RASL+ R+++
Sbjct: 55 VATDRESGKSKGVGYVTFSLKEDADRAIQELDGGSFGGSKRKIQVKWADERASLKDRKAE 114
Query: 59 VTQEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQ 118
+ K KP T ++ S
Sbjct: 115 I----------------------------------KVSKPIPGQT--------DNKSTDP 132
Query: 119 RVARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVL 178
+ +T+++ GL + + + + + +P+ +E E E D + ++
Sbjct: 133 KAIQTLVLTGLPSDITKNVLWKKIRKVNDKAELVFPVEAQENE------EEAPKDTAHIV 186
Query: 179 YTTVKSACASVALLHQKEIKGGT---VWARQL-----GGEG-SKTQKWKLIIRNIPFKAK 229
+ + A ++ LH KG V ++L GEG + + +LIIRN+ +
Sbjct: 187 FPSHGDALKALPKLHGHTYKGNILSCVLKKRLEKLSAKGEGKAPSHAGRLIIRNLSWDTT 246
Query: 230 VNEIKDMFSPVGLVWNVYIP-------------HNTDTGLSKGFAFVKFTCKRDAESAIQ 276
+ +++ F P G + ++ +P ++GFAFV F + DAE AI+
Sbjct: 247 IQDLRKAFLPYGPIHSIDLPTLPSKLPPSSDPAKPPPPPRARGFAFVWFLARHDAEKAIE 306
Query: 277 KFNGQKFGKRP------IAVDWAVPKNIY 299
NG+ K P +AVDWA+ K +
Sbjct: 307 GTNGKPIKKGPDGEGRVVAVDWALSKEKW 335
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + ++P+ A ++ FS +G V + ++ + ++G SKG +V F+ K DA+ AIQ+
Sbjct: 26 LFVSSLPYTATTTDLLTHFSYIGPVRHGFVATDRESGKSKGVGYVTFSLKEDADRAIQEL 85
Query: 279 NGQKFG--KRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDD 322
+G FG KR I V WA + A V G +D+ S D
Sbjct: 86 DGGSFGGSKRKIQVKWADERASLKDRKAEIKVSKPIPGQTDNKSTD 131
>gi|169773975|ref|XP_001821456.1| ribosome biogenesis (Nop4) [Aspergillus oryzae RIB40]
gi|83769317|dbj|BAE59454.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391869076|gb|EIT78281.1| nucleolar protein fibrillarin NOP77 [Aspergillus oryzae 3.042]
Length = 726
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 132/297 (44%), Gaps = 68/297 (22%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T+FI NLPF +E + + F+ FG + V+ T+RP+GTGF+ F VE A A V
Sbjct: 314 TVFIRNLPFTCTDETLYEHFTQFGPLRYARIVVDPETERPRGTGFVCFWKVEDAAACVRD 373
Query: 487 S------------KTTSGLGIF-----------------LKGRQLTVLKALDKKLA---H 514
+ K G F L GR L V +A+ K A
Sbjct: 374 APKQQDTIAPEKEKAKKGSIAFKHSVLQNENADPTGRYTLDGRVLQVSRAVSKSRATQLA 433
Query: 515 DKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQ-SPNF 573
++ + + D R LYL EG I +P + +S ++ R+ +++ + ++ +P
Sbjct: 434 EEGVSRRLVRDTDKRRLYLLSEGTIPSDSPLYKKLSPSEIKMREDSFKQRQSFIKKNPTL 493
Query: 574 HVSRTRLVIYNLPKSMTEKGLKKLCIDAVV-------------------SRASKQKP--- 611
H+S TRL + N+P+ +T K LK+L AVV RAS++
Sbjct: 494 HLSLTRLSVRNVPRHVTSKDLKQLARQAVVGFAQDVSAGLRQPLSRDELQRASEEMKEAE 553
Query: 612 ---------VIKQIKFLQSLKKG-KVDTKH---YSRGVAFVEFTEHQHALVALRVLN 655
V++Q K + + G KV+ SRG FVE+ H+HAL+ LR LN
Sbjct: 554 QLRKKKGLGVVRQAKIVFEGRDGSKVEENSGAGRSRGYGFVEYFTHRHALMGLRWLN 610
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 47/79 (59%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +R++P ++ + FS ++ + + ++++T SKG+ FV F DA++A+ +F
Sbjct: 47 LFVRSLPASVTTEKLVEYFSQSYVIKHALVVNDSETKQSKGYGFVTFADVDDAKAALDEF 106
Query: 279 NGQKFGKRPIAVDWAVPKN 297
NG F + I VD+A P++
Sbjct: 107 NGSVFDGKKIKVDYAQPRH 125
>gi|238492008|ref|XP_002377241.1| ribosome biogenesis (Nop4), putative [Aspergillus flavus NRRL3357]
gi|220697654|gb|EED53995.1| ribosome biogenesis (Nop4), putative [Aspergillus flavus NRRL3357]
Length = 729
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 132/297 (44%), Gaps = 68/297 (22%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T+FI NLPF +E + + F+ FG + V+ T+RP+GTGF+ F VE A A V
Sbjct: 317 TVFIRNLPFTCTDETLYEHFTQFGPLRYARIVVDPETERPRGTGFVCFWKVEDAAACVRD 376
Query: 487 S------------KTTSGLGIF-----------------LKGRQLTVLKALDKKLA---H 514
+ K G F L GR L V +A+ K A
Sbjct: 377 APKQQDTIAPEKEKAKKGSIAFKHSVLQNENADPTGRYTLDGRVLQVSRAVSKSRATQLA 436
Query: 515 DKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQ-SPNF 573
++ + + D R LYL EG I +P + +S ++ R+ +++ + ++ +P
Sbjct: 437 EEGVSRRLVRDTDKRRLYLLSEGTIPSDSPLYKKLSPSEIKMREDSFKQRQSFIKKNPTL 496
Query: 574 HVSRTRLVIYNLPKSMTEKGLKKLCIDAVV-------------------SRASKQKP--- 611
H+S TRL + N+P+ +T K LK+L AVV RAS++
Sbjct: 497 HLSLTRLSVRNVPRHVTSKDLKQLARQAVVGFAQDVSAGLRQPLSRDELQRASEEMKEAE 556
Query: 612 ---------VIKQIKFLQSLKKG-KVDTKH---YSRGVAFVEFTEHQHALVALRVLN 655
V++Q K + + G KV+ SRG FVE+ H+HAL+ LR LN
Sbjct: 557 QLRKKKGLGVVRQAKIVFEGRDGSKVEENSGAGRSRGYGFVEYFTHRHALMGLRWLN 613
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 47/79 (59%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +R++P ++ + FS ++ + + ++++T SKG+ FV F DA++A+ +F
Sbjct: 47 LFVRSLPASVTTEKLVEYFSQSYVIKHALVVNDSETKQSKGYGFVTFADVDDAKAALDEF 106
Query: 279 NGQKFGKRPIAVDWAVPKN 297
NG F + I VD+A P++
Sbjct: 107 NGSVFDGKKIKVDYAQPRH 125
>gi|358380041|gb|EHK17720.1| hypothetical protein TRIVIDRAFT_42809 [Trichoderma virens Gv29-8]
Length = 746
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 129/288 (44%), Gaps = 62/288 (21%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV-- 484
T+F+ NLPF +E++ F FG+V V+ + T++P GTGF+ F V+AA A
Sbjct: 335 TVFVRNLPFTTTDEQLSSFFGHFGKVRYARVVIDKATEKPAGTGFVCF--VDAADAKTCI 392
Query: 485 -----SASKTTSGL-------------GIF-LKGRQLTVLKALDKKLAHD-KEIDKSKNE 524
A T G+ G + L GR L V +A+ + A + E ++
Sbjct: 393 IGAPRRAQPTAGGVKHSILQDENADPTGKYTLDGRVLQVAQAVGRNEAANLAENSLAQRR 452
Query: 525 TNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQ--MLHEKKMTKLQSPNFHVSRTRLVI 582
D R LYL EG + G+P ++D ++ RQ KK+ + ++P H+S TRL +
Sbjct: 453 QKDKRRLYLLSEGSLGAGSPLRGLLTDAEVRMRQASATQRKKLVE-KNPMLHISLTRLAL 511
Query: 583 YNLPKSMTEKGLKKLCIDAVVS-------------------------------RASKQKP 611
N+P + K LK+L AVV R K+K
Sbjct: 512 RNIPNDLGAKDLKELARKAVVGFAKDVKEGRRQPLSKEENARDGKDAKDKEKDRKLKRKG 571
Query: 612 VIKQIKFLQSLKKG----KVDTKHYSRGVAFVEFTEHQHALVALRVLN 655
++KQ K + KG + SRG F+E+T H+ AL+ LR LN
Sbjct: 572 IVKQAKIVFEDNKGSKVSEASGAGKSRGYGFIEYTSHRWALMGLRYLN 619
>gi|321265754|ref|XP_003197593.1| hypothetical protein CGB_N3080W [Cryptococcus gattii WM276]
gi|317464073|gb|ADV25806.1| Hypothetical protein CGB_N3080W [Cryptococcus gattii WM276]
Length = 988
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 130/311 (41%), Gaps = 78/311 (25%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFK--------TV 477
+T+FI NLPF+ E+ F +FG + + + T R +GTGF+ F
Sbjct: 424 STLFIRNLPFETTELELNTLFRSFGPLRYAKITIDKATGRSRGTGFVCFWKNEHADEVIE 483
Query: 478 EAATAAVSASKTTSGLG-------------------------IFLKGRQLTVLKALDKKL 512
EA A+ + LG + L GR L + +A+ ++
Sbjct: 484 EAQRVAMETGANSIPLGGAAPKNPFALPSLLTADPSSSLASRLVLHGRTLDITRAVTRET 543
Query: 513 AHDKEIDKSK-NETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQM-LHEKKMTKLQS 570
A + D + D RN YL +EG+I +PAAEG+ + ++ KRQ + +K +
Sbjct: 544 ASQMKEDTERLRNAADKRNTYLMREGVIFPNSPAAEGLPESEIEKRQASFNSRKALLRGN 603
Query: 571 PNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAV--------------VSRA---------- 606
P+ ++S+TRL I LP +T++ LK+L I AV ++RA
Sbjct: 604 PSLYISKTRLSIRQLPLFVTDRTLKRLAIHAVKTFDKEVADGEREGLARAEEMDGTMSAA 663
Query: 607 -------------------SKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHA 647
++ VI+ Q+ K + + S+G F+E H+ A
Sbjct: 664 IAARGDKSGGKGKGKGGKKERETAVIQSKIVRQTEKLDPITGQGRSKGYGFLEMRSHKDA 723
Query: 648 LVALRVLNNNP 658
L LR NNNP
Sbjct: 724 LKVLRWANNNP 734
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 140/331 (42%), Gaps = 83/331 (25%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGG--RKIGVKHAMHRASLEQRRS- 57
+ T + S + +G GYV F++ EDA+RA++ +G S GG RKI VK A RASL+ R++
Sbjct: 55 VATDRESGKSKGVGYVTFSLKEDADRAIQELDGGSFGGGKRKIQVKWADERASLKDRKAE 114
Query: 58 -KVTQEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQ 116
KV++ + + K+ D K
Sbjct: 115 IKVSKPIPGQTDSKSTDPK----------------------------------------- 133
Query: 117 KQRVARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASA 176
+T+++ GL + + + + + +P+ EE E+ D +
Sbjct: 134 ---AIQTLVLTGLPSDITKNVLWKKIRKVNEKAELVFPVEAEEGEE-------APKDTAH 183
Query: 177 VLYTTVKSACASVALLHQKEIKG---GTVWARQL-----GGEG-SKTQKWKLIIRNIPFK 227
+++ T A ++ LH KG V ++L GEG + + +LIIRN+ +
Sbjct: 184 IIFPTHGDALKALPKLHGHTYKGCILSCVLKKRLEKLSAKGEGKAPSHAGRLIIRNLSWD 243
Query: 228 AKVNEIKDMFSPVGLVWNVYIP-------------HNTDTGLSKGFAFVKFTCKRDAESA 274
V +++ F P G + ++ +P ++GFAFV F + DAE A
Sbjct: 244 TTVQDLRKAFLPYGPIHSIDLPTLPSKLPPSSDPTKPPPPPRARGFAFVWFLTRHDAEKA 303
Query: 275 IQKFNGQKFGKRP------IAVDWAVPKNIY 299
I+ NG+ K P +AVDWA+ K +
Sbjct: 304 IEGINGKPIKKGPDGEGRVVAVDWALSKEKW 334
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + ++P+ A ++ FS +G V + ++ + ++G SKG +V F+ K DA+ AIQ+
Sbjct: 26 LFVSSLPYTATTTDLLTHFSYIGPVRHGFVATDRESGKSKGVGYVTFSLKEDADRAIQEL 85
Query: 279 NGQKF--GKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDD 322
+G F GKR I V WA + A V G +DS S D
Sbjct: 86 DGGSFGGGKRKIQVKWADERASLKDRKAEIKVSKPIPGQTDSKSTD 131
>gi|315056867|ref|XP_003177808.1| hypothetical protein MGYG_01871 [Arthroderma gypseum CBS 118893]
gi|311339654|gb|EFQ98856.1| hypothetical protein MGYG_01871 [Arthroderma gypseum CBS 118893]
Length = 748
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 133/297 (44%), Gaps = 67/297 (22%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV- 484
+TIFI N+PF +E + + FS FG V VL T+RP+GT F+ F VE A++ +
Sbjct: 315 STIFIRNIPFSATDESLHEHFSKFGPVRYARVVLDPATERPRGTAFVCFYKVEDASSCIR 374
Query: 485 -----------------SASKTTSGL----------GIFLKGRQLTVLKALDKKLAHD-K 516
+A+K + + GR L V +A+ + A +
Sbjct: 375 EAPRDTDASRNKDPRQKAATKQIHSVLEDESNDVTGNYTMDGRVLQVSQAVSRTEAGRLE 434
Query: 517 EIDKSKNETNDH--RNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQ-SPNF 573
E ++ E DH R L+L EG I +P +S+ + R+ +++ ++ +P
Sbjct: 435 EEGHTRREVRDHDKRRLFLLSEGTIPTNSPIYAKLSETERKMREASAKQRQKLIKNNPML 494
Query: 574 HVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS----------------------------- 604
HVS TRL + NLP+ + K LK L +AVV
Sbjct: 495 HVSLTRLSVRNLPRHIDSKALKALAREAVVGFAKDVKNGLRKPISWEESRRSAALMKEAE 554
Query: 605 --RASKQKPVIKQIKFLQSLKKG-KVDTKH---YSRGVAFVEFTEHQHALVALRVLN 655
R +++K ++KQ K + K G K++ K SRG F+E+ H+ +L+ LR LN
Sbjct: 555 QLRKTQKKGIVKQAKVVFEGKDGSKMNEKAGAGRSRGYGFIEYATHRSSLMGLRWLN 611
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +R++P A + + FS + + + + T KG+ FV FT DA+SA ++
Sbjct: 32 LFVRSLPTTATTESLTEYFSQSYPLKHATVVLDPQTKQPKGYGFVTFTDHEDAQSAAKEL 91
Query: 279 NGQKFGKRPIAVDWAVPKN 297
N F + I ++ A P++
Sbjct: 92 NNSVFEGKKIKIELAEPRH 110
Score = 38.9 bits (89), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 39/178 (21%)
Query: 414 SLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLK 473
S Q ++ T+F+ +LP E + + FS + VL TK+PKG GF+
Sbjct: 18 STDQAAAKERKTRTLFVRSLPTTATTESLTEYFSQSYPLKHATVVLDPQTKQPKGYGFVT 77
Query: 474 FKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYL 533
F E A +A + +G+++ + A + +EID+
Sbjct: 78 FTDHEDAQSAAKELNNS-----VFEGKKIKIELAEPR----HREIDE------------- 115
Query: 534 AKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTE 591
KEG + V SK + L EK+ + P +L+I NLP SMTE
Sbjct: 116 -KEG---------KSVPSSAPSKAKELKEKRRLESLPP-------KLIIRNLPWSMTE 156
>gi|119188303|ref|XP_001244758.1| hypothetical protein CIMG_04199 [Coccidioides immitis RS]
gi|392871470|gb|EAS33387.2| ribosome biogenesis protein [Coccidioides immitis RS]
Length = 751
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 127/297 (42%), Gaps = 67/297 (22%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
+T+FI NLPF +E + + F+ FG V V+ T RP+GTGF+ F + A A +
Sbjct: 328 STVFIRNLPFSATDETLYEHFTRFGAVRYARIVVDPETDRPRGTGFVCFWKEDEAKACIR 387
Query: 486 A------------SKTTSGLGI----------------FLKGRQLTVLKALDKKLAHDKE 517
SK S I + GR L V +A+ +K A E
Sbjct: 388 ESPKRTEEVLSKDSKQKSAFAIKKSVLENEQADPSGKYTIDGRVLQVSQAVSRKEASRLE 447
Query: 518 IDKSKN---ETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQS-PNF 573
+ S D R LYL EG I +P +S ++ R+ +++ ++S P
Sbjct: 448 AEGSSRRDARDKDKRRLYLLSEGTIPTNSPLYSKLSPSEVKMREASAKQRQKLIKSNPML 507
Query: 574 HVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS----------------------------- 604
H+S TRL + N+P+ + K LK+L +AVV
Sbjct: 508 HISLTRLSVRNIPRHVDSKVLKQLAREAVVGFAKDVKSGHRQPLSKEELSRSAELMKEQE 567
Query: 605 --RASKQKPVIKQIKFLQSLKKGK--VDTK--HYSRGVAFVEFTEHQHALVALRVLN 655
R K K ++KQ K + ++G DT SRG F+E+T H+ AL+ LR LN
Sbjct: 568 KLRKIKGKGIVKQAKVIFEGREGSKISDTSGAGRSRGYGFIEYTSHRSALMGLRWLN 624
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 15/133 (11%)
Query: 215 QKWKLIIRNIPFK-AKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAES 273
Q KLI+RN+P+ + ++ +F G V + IP GF FV K++AE
Sbjct: 157 QPPKLIVRNLPWSVGEPEQLAVLFRSYGKVKHAVIPKKGSR--HAGFGFVVMRGKKNAEK 214
Query: 274 AIQKFNGQKFGKRPIAVDWAVPKNIY---------SSGGAAAG---VQNKGDGNSDSGSD 321
A++ NG++ R +AVDWAV K ++ ++G G V+N DG+S +D
Sbjct: 215 ALEGVNGKEVDGRTLAVDWAVDKEVWDTLQQPTDNTAGKLEDGQTAVENGVDGHSGVEND 274
Query: 322 DDLGDDDAETASD 334
DD E +D
Sbjct: 275 SAKSDDAIEPGTD 287
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 40/85 (47%)
Query: 213 KTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAE 272
K + L +R++P A + + FS + + + T KG+ FV F DA+
Sbjct: 42 KAHRRTLFVRSLPPSATTESLTEYFSQSYPIKHATAVADPQTKQCKGYGFVTFADVEDAQ 101
Query: 273 SAIQKFNGQKFGKRPIAVDWAVPKN 297
A+ + NG F R + ++ A P++
Sbjct: 102 RALGELNGSVFDGRKLKIEVAEPRH 126
>gi|58262518|ref|XP_568669.1| hypothetical protein CNN01920 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134119018|ref|XP_772011.1| hypothetical protein CNBN1890 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254615|gb|EAL17364.1| hypothetical protein CNBN1890 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230843|gb|AAW47152.1| hypothetical protein CNN01920 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 942
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 129/311 (41%), Gaps = 78/311 (25%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFK--------TV 477
+T+FI NLPF+ E+ F +FG + + + T R +GTGF+ F
Sbjct: 420 STLFIRNLPFETTELELNTLFRSFGPLRYAKITIDKATGRSRGTGFVCFWKNEHADEVIE 479
Query: 478 EAATAAVSASKTTSGLG-------------------------IFLKGRQLTVLKALDKKL 512
EA A+ + LG + L GR L + +A+ ++
Sbjct: 480 EAQRVAMETGANSIPLGGAAPKNPFALPSLLTADPSSSLASRLVLHGRTLDITRAVTRET 539
Query: 513 AHDKEIDKSK-NETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQM-LHEKKMTKLQS 570
A + D + D RN YL +EG+I +PAAEG+ + ++ KRQ + +K +
Sbjct: 540 ASQMKEDTERLRNAADKRNTYLMREGVIFPNSPAAEGLPESEIEKRQASFNSRKALLRGN 599
Query: 571 PNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAV--------------VSRA---------- 606
P+ ++S+TRL I LP T++ LK+L I AV ++RA
Sbjct: 600 PSLYISKTRLSIRQLPLFATDRTLKRLAIHAVKAFDKEVADGEREGLARAEEMDGTMSSA 659
Query: 607 -------------------SKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHA 647
++ VI+ Q+ K V + S+G F+E H+ A
Sbjct: 660 IAARGDKSGGKGKGKGGKKERETAVIQSKIVRQTEKLDPVTGQGRSKGYGFLEMRSHKDA 719
Query: 648 LVALRVLNNNP 658
L LR NNNP
Sbjct: 720 LKVLRWANNNP 730
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 140/329 (42%), Gaps = 78/329 (23%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGG--RKIGVKHAMHRASLEQRRSK 58
+ T + S + +G GYV F++ EDA+RA++ +G S GG RKI VK A RASL+ R+++
Sbjct: 55 VATDRESGKSKGVGYVTFSLKEDADRAIQELDGGSFGGSKRKIQVKWADERASLKDRKAE 114
Query: 59 VTQEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQ 118
+ K KP T ++ S
Sbjct: 115 I----------------------------------KVSKPIPGQT--------DNKSTDP 132
Query: 119 RVARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVL 178
+ +T+++ GL + + + + + +P+ +E E E D + ++
Sbjct: 133 KAIQTLVLTGLPSDITKNVLWKKIRKVNDKAELVFPVEAQENE------EEAPKDTAHIV 186
Query: 179 YTTVKSACASVALLHQKEIKGGT---VWARQL-----GGEG-SKTQKWKLIIRNIPFKAK 229
+ + A ++ LH KG V ++L GEG + + +LIIRN+ +
Sbjct: 187 FPSHGDALKALPKLHGHTYKGNILSCVLKKRLEKLSAKGEGKAPSHAGRLIIRNLSWDTT 246
Query: 230 VNEIKDMFSPVGLVWNVYIP-------------HNTDTGLSKGFAFVKFTCKRDAESAIQ 276
+ +++ F P G + ++ +P ++GFAFV F + DAE AI+
Sbjct: 247 IQDLRKAFLPYGPIHSIDLPTLPSKLPPSSDPAKPPPPPRARGFAFVWFLARHDAEKAIE 306
Query: 277 KFNGQKFGKRP------IAVDWAVPKNIY 299
NG+ K P +AVDWA+ K +
Sbjct: 307 GTNGKPIKKGPDGEGRVVAVDWALSKEKW 335
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + ++P+ A ++ FS +G V + ++ + ++G SKG +V F+ K DA+ AIQ+
Sbjct: 26 LFVSSLPYTATTTDLLTHFSYIGPVRHGFVATDRESGKSKGVGYVTFSLKEDADRAIQEL 85
Query: 279 NGQKFG--KRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDD 322
+G FG KR I V WA + A V G +D+ S D
Sbjct: 86 DGGSFGGSKRKIQVKWADERASLKDRKAEIKVSKPIPGQTDNKSTD 131
>gi|398410055|ref|XP_003856481.1| hypothetical protein MYCGRDRAFT_31414 [Zymoseptoria tritici IPO323]
gi|339476366|gb|EGP91457.1| hypothetical protein MYCGRDRAFT_31414 [Zymoseptoria tritici IPO323]
Length = 740
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 132/302 (43%), Gaps = 69/302 (22%)
Query: 422 DELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAAT 481
D+ +T+FI NLPF +E+++ F+ FG V+ T+R KGTGF+ F + A
Sbjct: 311 DDRSSTLFIRNLPFTCTDEDLEDHFAQFGNTRYARVVMDYGTERSKGTGFVCFYNKDDAD 370
Query: 482 AAV----------SASKTTSGLGIF------------------LKGRQLTVLKALDK--- 510
A V + K G + L GR L V KA++K
Sbjct: 371 ACVREAPARQLPQAQEKGKDGKPVLNPHSILQNDDADPTGRYTLDGRVLQVTKAVEKSEA 430
Query: 511 -KLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQ 569
+L + + ++K + D R LYL EG I + E +S + + R+ +++ T ++
Sbjct: 431 NRLTEEGTVHRNKRDM-DKRRLYLLSEGTIPSNSKLYEKLSPSEKAMREGSAKQRKTLIE 489
Query: 570 S-PNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVD 628
S P+ H+S TRL + N+P+S+ K LK L DAVV AS K +Q + L +G +
Sbjct: 490 SNPSLHLSLTRLSVRNIPRSIGSKELKALARDAVVGFASDVKAGSRQRLSKEELSRGGEE 549
Query: 629 TKH-----------------------------------YSRGVAFVEFTEHQHALVALRV 653
+ SRG F+E+ H++AL+ LR
Sbjct: 550 MREAELARKKSGKGIVRQAKVVFESAGGTKVSEEAGAGRSRGYGFIEYYTHRNALMGLRW 609
Query: 654 LN 655
LN
Sbjct: 610 LN 611
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 74/129 (57%), Gaps = 7/129 (5%)
Query: 215 QKWKLIIRNIPFKAKV-NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAES 273
Q KLI+RN+P+ K ++++ +F G V YIP GL GF FV K++AE
Sbjct: 162 QPTKLIVRNLPWSIKRGDQLEKLFLSFGKVKKAYIPKKG-PGLMAGFGFVLMRGKKNAEK 220
Query: 274 AIQKFNGQKFGKRPIAVDWAVPKNIYS----SGGAAAGVQNKGDGNSDSGSDDDLGDDDA 329
AI+ NG++ R +AVDWAV K+ Y A V N+ D + D+ +++++ D+D
Sbjct: 221 AIEGVNGKEIDGRTLAVDWAVEKDTYEDLVKGEKAEEEVSNEEDIDIDA-AEEEMIDNDE 279
Query: 330 ETASDDSNS 338
E SDD++S
Sbjct: 280 EIESDDASS 288
>gi|405123946|gb|AFR98709.1| nucleolar protein 4 [Cryptococcus neoformans var. grubii H99]
Length = 994
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 129/311 (41%), Gaps = 78/311 (25%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFK--------TV 477
+T+FI NLPF+ E+ F +FG + + + T R +GTGF+ F
Sbjct: 418 STLFIRNLPFETTELELNALFRSFGPLRYAKITIDKATGRSRGTGFVCFWKNEHADEVIE 477
Query: 478 EAATAAVSASKTTSGLG-------------------------IFLKGRQLTVLKALDKKL 512
EA A+ + LG + L GR L + +A+ ++
Sbjct: 478 EAQRVAMETGANSIPLGGAVPKNPFALPSLLTADPSSSLASRLVLHGRTLDITRAVTRET 537
Query: 513 AHDKEIDKSK-NETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQM-LHEKKMTKLQS 570
A + D + D RN YL +EG+I +PAAEG+ + ++ KRQ + +K +
Sbjct: 538 ASQMKEDTERLRNAADKRNTYLMREGVIFPNSPAAEGLPESEIEKRQASFNSRKALLRGN 597
Query: 571 PNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAV--------------VSRA---------- 606
P+ ++S+TRL I LP T++ LK+L I AV ++RA
Sbjct: 598 PSLYISKTRLSIRQLPLFATDRTLKRLAIHAVKAFDKEVADGEREGLARAEEMDATMSAA 657
Query: 607 -------------------SKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHA 647
++ VI+ Q+ K V + S+G F+E H+ A
Sbjct: 658 IAARGDKSGGKGKGKGGKKERETAVIQSKIVRQTEKLDPVTGQGRSKGYGFLEMRSHKDA 717
Query: 648 LVALRVLNNNP 658
L LR NNNP
Sbjct: 718 LKVLRWANNNP 728
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 141/329 (42%), Gaps = 78/329 (23%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGG--RKIGVKHAMHRASLEQRRSK 58
+ T + S + +G GYV F++ EDA+RA++ +G S GG RKI VK A RASL+ R+++
Sbjct: 55 VATDRESGKSKGVGYVTFSLKEDADRAIQELDGGSFGGGNRKIQVKWADERASLKDRKAE 114
Query: 59 VTQEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQ 118
V K KP T ++ S
Sbjct: 115 V----------------------------------KVSKPIPGQT--------DNKSTDP 132
Query: 119 RVARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVL 178
+ +T+++ GL + + + + + +P +E G +E K D + ++
Sbjct: 133 KAIQTLVLTGLPSDITKNVLWKKIRKVNDKAELLFP-----VEAEGSEEEAPK-DTAHII 186
Query: 179 YTTVKSACASVALLHQKEIKGGT---VWARQL-----GGEG-SKTQKWKLIIRNIPFKAK 229
+ + A ++ LH KG V ++L GEG + + +LIIRN+ +
Sbjct: 187 FPSHSDALKALPKLHGHTYKGSILSCVLKKRLEKLSAKGEGKAPSHAGRLIIRNLSWDTT 246
Query: 230 VNEIKDMFSPVGLVWNVYIP-------------HNTDTGLSKGFAFVKFTCKRDAESAIQ 276
V +++ F P G + ++ +P ++GFAFV F + DAE AI+
Sbjct: 247 VQDLRKAFLPYGPIHSIDLPTLPSKLPPSSDPTKPPPPPRARGFAFVWFLARHDAEKAIE 306
Query: 277 KFNGQKFGK------RPIAVDWAVPKNIY 299
NG+ K R +AVDWA+ K +
Sbjct: 307 GINGKPIKKGLDGEGRVVAVDWALSKEKW 335
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + ++P+ A ++ FS +G V + ++ + ++G SKG +V F+ K DA+ AIQ+
Sbjct: 26 LFVSSLPYTATTTDLLTHFSYIGPVRHGFVATDRESGKSKGVGYVTFSLKEDADRAIQEL 85
Query: 279 NGQKF--GKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDD 322
+G F G R I V WA + A V G +D+ S D
Sbjct: 86 DGGSFGGGNRKIQVKWADERASLKDRKAEVKVSKPIPGQTDNKSTD 131
>gi|400597074|gb|EJP64818.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 769
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 125/285 (43%), Gaps = 57/285 (20%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
TIF+ NLPF ++E +K FS+FG V V+ + T RP GT F+ F E A +
Sbjct: 320 TIFVRNLPFTTNDEHLKSFFSSFGNVRYARVVMDKATDRPAGTAFVCFYQEEDAKTCIKG 379
Query: 487 S-----KTTSGLGIFLK-------------GRQLTVLKALDKKLAHD-KEIDKSKNETND 527
+ SG LK GR L++ +A+++ A + E + D
Sbjct: 380 APRRQQPAASGKKSILKDDNLDPTGKYTLDGRLLSIAQAVNRAEASNLAESSLANRREKD 439
Query: 528 HRNLYLAKEGLILEGTPAAEGVSDDDMSKRQ--MLHEKKMTKLQSPNFHVSRTRLVIYNL 585
R LYL EG I +P +S ++ RQ + KK+ + +P H+S TR+ + N+
Sbjct: 440 KRRLYLLAEGSIGTNSPIYNLLSLPEIRMRQASAVQRKKLVQ-GNPTLHISLTRIALRNI 498
Query: 586 PKSMTEKGLKKLCIDAVV-------------------------------SRASKQKPVIK 614
PK++ K LK+L AVV R K K +++
Sbjct: 499 PKNIGSKELKELARKAVVGFAQDVKEGIREPLSKEENARDGKDAKEKEKQRKLKGKGIVR 558
Query: 615 QIKF-LQSLKKGKVDTKH---YSRGVAFVEFTEHQHALVALRVLN 655
Q K +S + KV + SRG F+E+ H AL+ LR LN
Sbjct: 559 QAKIVFESTQGSKVSEESGAGKSRGYGFIEYVSHHWALMGLRYLN 603
>gi|303316410|ref|XP_003068207.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240107888|gb|EER26062.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320037953|gb|EFW19889.1| ribosome biogenesis protein Nop4 [Coccidioides posadasii str.
Silveira]
Length = 751
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 126/297 (42%), Gaps = 67/297 (22%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
+T+FI NLPF +E + + F+ FG V V+ T RP+GTGF+ F + A A +
Sbjct: 328 STVFIRNLPFSATDETLYEHFTRFGAVRYARIVVDPETDRPRGTGFVCFWKEDEAKACIR 387
Query: 486 A------------SKTTSGLGI----------------FLKGRQLTVLKALDKKLAHDKE 517
SK S I + GR L V +A+ +K A E
Sbjct: 388 ESPKRTEEVLSKDSKQKSAFAIKKSVLENEQADPSGKYTIDGRVLQVSQAVSRKEASRLE 447
Query: 518 IDKSKN---ETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQS-PNF 573
+ S D R LYL EG I +P +S ++ R+ +++ ++S P
Sbjct: 448 AEGSSRRDARDKDKRRLYLLSEGTIPTNSPLYSKLSPSEVKMREASAKQRQKLIKSNPML 507
Query: 574 HVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS----------------------------- 604
H+S TRL + N+P+ + K LK+L +AVV
Sbjct: 508 HISLTRLSVRNIPRHVDSKVLKQLAREAVVGFAKDVKSGHRQPLSKEELSRSAELMKEQE 567
Query: 605 --RASKQKPVIKQIKFLQSLKKG----KVDTKHYSRGVAFVEFTEHQHALVALRVLN 655
R K K ++KQ K + ++G + SRG F+E+T H+ AL+ LR LN
Sbjct: 568 KLRKIKGKGIVKQAKVIFEGREGSKISETSGAGRSRGYGFIEYTSHRSALMGLRWLN 624
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 15/130 (11%)
Query: 218 KLIIRNIPFK-AKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
KLI+RN+P+ + ++ +F G V + IP GF FV K++AE A++
Sbjct: 160 KLIVRNLPWSVGEPEQLAVLFRSYGKVKHAVIPKKGSR--HAGFGFVVMRGKKNAEKALE 217
Query: 277 KFNGQKFGKRPIAVDWAVPKNIY--------SSGG----AAAGVQNKGDGNSDSGSDDDL 324
NG++ R +AVDWAV K ++ ++ G A V+N DG+S +D
Sbjct: 218 GVNGKEVDGRTLAVDWAVDKEVWDTLQQPTDNTAGKLEDGQAAVENGVDGHSRVENDSAK 277
Query: 325 GDDDAETASD 334
DD E +D
Sbjct: 278 SDDAIELGTD 287
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 40/85 (47%)
Query: 213 KTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAE 272
K + L +R++P A + + FS + + + T KG+ FV F DA+
Sbjct: 42 KAHRRTLFVRSLPPSATTESLTEYFSQSYPIKHATAVADPQTKQCKGYGFVTFADVEDAQ 101
Query: 273 SAIQKFNGQKFGKRPIAVDWAVPKN 297
A+ + NG F R + ++ A P++
Sbjct: 102 RALGELNGSVFDGRKLKIEVAEPRH 126
>gi|67528248|ref|XP_661934.1| hypothetical protein AN4330.2 [Aspergillus nidulans FGSC A4]
gi|40741301|gb|EAA60491.1| hypothetical protein AN4330.2 [Aspergillus nidulans FGSC A4]
gi|259482863|tpe|CBF77747.1| TPA: ribosome biogenesis (Nop4), putative (AFU_orthologue;
AFUA_4G06250) [Aspergillus nidulans FGSC A4]
Length = 724
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 131/297 (44%), Gaps = 67/297 (22%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV- 484
+TIFI NLPF D+E + F+ FG + V+ T+RP+GTGF+ F E A A V
Sbjct: 309 STIFIRNLPFTCDDESLYDHFTQFGPLRYARIVVDPETERPRGTGFVCFWKPEHAQACVQ 368
Query: 485 ---------SASKTTSGLGIFLK------------------GRQLTVLKALDKKLA---H 514
+A K G +K GR L + +A+ K A
Sbjct: 369 GAPKQQDPLAAEKEKGKKGTIIKQSVLQNENADPTGRYTLDGRVLQISRAVSKSRATQLR 428
Query: 515 DKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQ-SPNF 573
++ + K D R LYL EG I + + +S ++ R+ +++ ++ +P+
Sbjct: 429 EEGVSKRLVRDTDKRRLYLLNEGTISPNSTLYKSLSPSEIKMREDSFKQRQNFIRKNPSL 488
Query: 574 HVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQ-------------IKFLQ 620
H S TRL I N+P+ +T K LK+L +A+V A K I+Q ++ +
Sbjct: 489 HFSLTRLSIRNIPRHVTSKDLKQLAREAIVGFAKDVKEGIRQPLSREEMDRASEEMREAE 548
Query: 621 SLKK---------------GKVDTK-------HYSRGVAFVEFTEHQHALVALRVLN 655
L+K G+ +K SRG F+E+ H+HAL+ LR LN
Sbjct: 549 KLRKKKGVGVVRQAKIVFEGRDGSKVSEDSGAGRSRGYGFIEYYTHRHALMGLRWLN 605
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 214 TQKWKLIIRNIPFKAKVNE-IKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAE 272
TQ KLI+RN+P+ K E + F G V V +P + L+ GF FV K++AE
Sbjct: 147 TQPPKLIVRNLPWSIKTPEDLAAHFRSFGKVKYVTLPKKG-SQLA-GFGFVVLRGKKNAE 204
Query: 273 SAIQKFNGQKFGKRPIAVDWAVPKNIY 299
A++ NG++ R +AVDWAV K ++
Sbjct: 205 KALEAVNGKEVDGRTLAVDWAVEKEVW 231
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 49/88 (55%)
Query: 210 EGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKR 269
+G+ + +L IR++P A + + FS ++ + + + T SKG+ FV F
Sbjct: 30 DGATQPRRELFIRSLPASATNESLAEHFSQSYVIKHAVVVVDPKTKQSKGYGFVTFADVE 89
Query: 270 DAESAIQKFNGQKFGKRPIAVDWAVPKN 297
DA++A+++ NG F + I V++A P++
Sbjct: 90 DAKAALEELNGSTFEGKKIKVEYAQPRH 117
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 81/196 (41%), Gaps = 39/196 (19%)
Query: 394 NESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVV 453
N K ++ S + S K+ Q +G + + +FI +LP NE + + FS +
Sbjct: 5 NSPEKPTEASGAITESSSSKNNVQEDGATQPRRELFIRSLPASATNESLAEHFSQSYVIK 64
Query: 454 SFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLA 513
V V+ TK+ KG GF+ F VE A AA+ G +G+++ V A +
Sbjct: 65 HAVVVVDPKTKQSKGYGFVTFADVEDAKAALEELN-----GSTFEGKKIKVEYAQPRHRV 119
Query: 514 HDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNF 573
D+ + KS P+AE + +R+ E++ Q P
Sbjct: 120 VDETVGKS---------------------VPSAEAL------ERKKQREQQKADTQPP-- 150
Query: 574 HVSRTRLVIYNLPKSM 589
+L++ NLP S+
Sbjct: 151 -----KLIVRNLPWSI 161
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHR 49
+V + + +G+G+V FA +EDA A+E NG++ G+KI V++A R
Sbjct: 68 VVVDPKTKQSKGYGFVTFADVEDAKAALEELNGSTFEGKKIKVEYAQPR 116
>gi|326484107|gb|EGE08117.1| ribosome biogenesis [Trichophyton equinum CBS 127.97]
Length = 750
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 133/297 (44%), Gaps = 67/297 (22%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV- 484
+TIFI NLPF +E + + FS FG V VL T+RPKGT F+ F E A++ +
Sbjct: 322 STIFIRNLPFSATDEALHEHFSKFGPVRYARVVLDPATERPKGTAFVCFYKAEDASSCIR 381
Query: 485 --------SASK------------------TTSGLGIF-LKGRQLTVLKALDKKLAHD-K 516
S SK + G + + GR L V +A+ + A +
Sbjct: 382 EAPRDVDPSRSKDPRHKAATRQMHSVLEDESNDPTGKYTMDGRVLQVSQAVSRTEAGRLE 441
Query: 517 EIDKSKNETNDH--RNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQ-SPNF 573
E ++ E DH R L+L EG I +P +S+ + R+ +++ ++ +P
Sbjct: 442 EEGHTRREARDHDKRRLFLLSEGTIPSNSPLYAKLSETERRMREASAKQRQKLVKNNPML 501
Query: 574 HVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS----------------------------- 604
HVS TRL + NLP+ + K LK L +AVV
Sbjct: 502 HVSLTRLSVRNLPRHIDSKALKALAREAVVGFAKDVKNGLRKPISWEESRRSAALMKEAD 561
Query: 605 --RASKQKPVIKQIKFLQSLKKG-KVDTKH---YSRGVAFVEFTEHQHALVALRVLN 655
R +++K ++KQ K + K G K+ K SRG F+E+ H+++L+ LR LN
Sbjct: 562 HLRKAQKKGIVKQAKVVFEGKDGSKMSEKSGAGRSRGYGFIEYATHRNSLMGLRWLN 618
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +R++P A + + FS + + + + T SKG+ FV FT DA+SA ++
Sbjct: 49 LFVRSLPTTATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYGFVTFTDHEDAQSAAKEL 108
Query: 279 NGQKFGKRPIAVDWAVPKN 297
N F + I ++ A P++
Sbjct: 109 NNSVFEGKKIKIELAEPRH 127
>gi|326469986|gb|EGD93995.1| ribosome biogenesis protein Nop4 [Trichophyton tonsurans CBS
112818]
Length = 739
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 133/297 (44%), Gaps = 67/297 (22%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV- 484
+TIFI NLPF +E + + FS FG V VL T+RPKGT F+ F E A++ +
Sbjct: 305 STIFIRNLPFSATDEALHEHFSKFGPVRYARVVLDPATERPKGTAFVCFYKAEDASSCIR 364
Query: 485 --------SASK------------------TTSGLGIF-LKGRQLTVLKALDKKLAHD-K 516
S SK + G + + GR L V +A+ + A +
Sbjct: 365 EAPRDVDPSRSKDPRHKAATRQMHSVLEDESNDPTGKYTMDGRVLQVSQAVSRTEAGRLE 424
Query: 517 EIDKSKNETNDH--RNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQ-SPNF 573
E ++ E DH R L+L EG I +P +S+ + R+ +++ ++ +P
Sbjct: 425 EEGHTRREARDHDKRRLFLLSEGTIPSNSPLYAKLSETERRMREASAKQRQKLVKNNPML 484
Query: 574 HVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS----------------------------- 604
HVS TRL + NLP+ + K LK L +AVV
Sbjct: 485 HVSLTRLSVRNLPRHIDSKALKALAREAVVGFAKDVKNGLRKPISWEESRRSAALMKEAD 544
Query: 605 --RASKQKPVIKQIKFLQSLKKG-KVDTKH---YSRGVAFVEFTEHQHALVALRVLN 655
R +++K ++KQ K + K G K+ K SRG F+E+ H+++L+ LR LN
Sbjct: 545 HLRKAQKKGIVKQAKVVFEGKDGSKMSEKSGAGRSRGYGFIEYATHRNSLMGLRWLN 601
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +R++P A + + FS + + + + T SKG+ FV FT DA+SA ++
Sbjct: 32 LFVRSLPTTATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYGFVTFTDHEDAQSAAKEL 91
Query: 279 NGQKFGKRPIAVDWAVPKN 297
N F + I ++ A P++
Sbjct: 92 NNSVFEGKKIKIELAEPRH 110
>gi|302657509|ref|XP_003020475.1| hypothetical protein TRV_05442 [Trichophyton verrucosum HKI 0517]
gi|291184312|gb|EFE39857.1| hypothetical protein TRV_05442 [Trichophyton verrucosum HKI 0517]
Length = 793
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 132/298 (44%), Gaps = 69/298 (23%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV- 484
+TIFI NLPF +E + + FS FG V VL T+RPKGT F+ F E A++ +
Sbjct: 360 STIFIRNLPFSATDETLHEHFSKFGPVRYARVVLDPATERPKGTAFVCFYKAEDASSCIR 419
Query: 485 --------SASK------TTSGLGIFLK-------------GRQLTVLKALDKKLAHD-K 516
S SK T L L+ GR L V +A+ + A +
Sbjct: 420 EAPRDVDPSRSKDPRHKAATRQLHSVLEDESNDPTGKYTMDGRVLQVSQAVSRTEAGRLE 479
Query: 517 EIDKSKNETNDH--RNLYLAKEGLILEGTPAAEGVSDDDMSKRQML--HEKKMTKLQSPN 572
E ++ E DH R L+L EG I +P +S+ + R+ +K+ K +P
Sbjct: 480 EEGHTRREARDHDKRRLFLLSEGTIPSNSPLYAKLSETERRMREASAKQRQKLVKY-NPM 538
Query: 573 FHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS---------------------------- 604
HVS TRL + NLP+ + K LK L +AVV
Sbjct: 539 LHVSLTRLSVRNLPRHIDSKALKALAREAVVGFAKDVKNGLRKPISWEESRRSAALMKEA 598
Query: 605 ---RASKQKPVIKQIKFLQSLKKG-KVDTKH---YSRGVAFVEFTEHQHALVALRVLN 655
R +++K ++KQ K + K G K+ K SRG F+E+ H+++L+ LR LN
Sbjct: 599 DHLRKAQKKGIVKQAKVVFEGKDGSKMSEKSGAGRSRGYGFIEYATHRNSLMGLRWLN 656
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +R++P A + + FS + + + + T SKG+ FV FT DA+SA ++
Sbjct: 87 LFVRSLPTTATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYGFVTFTDHEDAQSAAREL 146
Query: 279 NGQKFGKRPIAVDWAVPKN 297
N F + I ++ A P++
Sbjct: 147 NNSVFEGKKIKIELAEPRH 165
>gi|302795223|ref|XP_002979375.1| hypothetical protein SELMODRAFT_419050 [Selaginella moellendorffii]
gi|300153143|gb|EFJ19783.1| hypothetical protein SELMODRAFT_419050 [Selaginella moellendorffii]
Length = 272
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 84/148 (56%), Gaps = 20/148 (13%)
Query: 115 SQKQRVARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDA 174
S+KQR ARTV+IG N++ AE + V+ + ++ + L+++GCK+ A
Sbjct: 50 SEKQRPARTVVIG---NSETAE------ARSSELSKVSRKISRKHISTR-LSRDGCKLPA 99
Query: 175 SAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGE---------GSKTQKWKLIIRNIP 225
+A+++T+V + +VA H +++ WARQLGGE GSK +KW+LIIRN+P
Sbjct: 100 AAIVFTSVTATRQAVATYHLQKLGNEVFWARQLGGEIDNCLKQLFGSKLKKWRLIIRNLP 159
Query: 226 FKAKVNEIKDMFSPVGLVWNVYIPHNTD 253
FK +K+ FS G VW P N D
Sbjct: 160 FKVTDAMLKEKFSAAGFVWET-TPRNPD 186
>gi|452848059|gb|EME49991.1| hypothetical protein DOTSEDRAFT_164875 [Dothistroma septosporum
NZE10]
Length = 739
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 135/305 (44%), Gaps = 70/305 (22%)
Query: 422 DELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAAT 481
D+ +TIF+ NLPF +E+++ +FS FG V+ T+R KGTGF+ F E A
Sbjct: 303 DDRSSTIFVRNLPFTCTDEDLEDQFSQFGNTRYARVVMDYGTERSKGTGFVCFYKKEDAD 362
Query: 482 AAVSASKTTSG----------------------------LGIF-LKGRQLTVLKALDK-- 510
A + + T S G + L GR L V +A+DK
Sbjct: 363 ACIRNAPTRSSAPSADKSGNDGRPSMPARSILQNEDTDPTGQYTLDGRVLQVSRAVDKSE 422
Query: 511 --KLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL 568
+L + + K +T D R LYL EG I + + + + + R+ +++ +
Sbjct: 423 AGRLTEEGVASRYKRDT-DKRRLYLLSEGSIPSNSKLWQQLPPSEQAMREASAKQRKALI 481
Query: 569 QS-PNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVV------------------------ 603
+S P+ ++S TRL + NLP+S+ K LK+L +AVV
Sbjct: 482 ESNPSLNLSLTRLSVRNLPRSIDSKALKQLAREAVVGFATDVKAGLRQQLSKEEISRGGE 541
Query: 604 -------SRASKQKPVIKQIKFL-QSLKKGKVDTKH---YSRGVAFVEFTEHQHALVALR 652
+R K K ++KQ K + +S KV SRG F+E+ H++AL LR
Sbjct: 542 EMREAELARKKKGKGIVKQAKVVFESAGGSKVSEDSGAGRSRGYGFIEYYTHRNALQGLR 601
Query: 653 VLNNN 657
LN +
Sbjct: 602 WLNGH 606
>gi|302686980|ref|XP_003033170.1| hypothetical protein SCHCODRAFT_67149 [Schizophyllum commune H4-8]
gi|300106864|gb|EFI98267.1| hypothetical protein SCHCODRAFT_67149 [Schizophyllum commune H4-8]
Length = 952
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 142/344 (41%), Gaps = 80/344 (23%)
Query: 394 NESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVV 453
N SA D S + + +K T + ++ T+FI N+P+D +E++ F AFG +
Sbjct: 409 NASASEDDGSDAERDEDEEAPVKPTLPDTDVGTTLFIRNVPYDATEDELRTLFRAFGPLR 468
Query: 454 SFVPVLHQVTKRPKGTGF-------------LKFKTVEAATAAVSAS------------- 487
T R +GTGF L+ T+ A T A+ +
Sbjct: 469 YARITKDPETGRGRGTGFACYWNKEDADKVILQSDTLRAETQALPITLPKPNPFTLPSLL 528
Query: 488 --KTTSGLG--IFLKGRQLTVLKALDKKLAHD-KEIDKSKNETNDHRNLYLAKEGLILEG 542
+S L + L GR L V++A+ + A +E + E D R+ YL +EG+IL
Sbjct: 529 TPDPSSSLAQSLVLHGRTLDVVRAVTRSTADKLREDGLKRREKADKRHAYLLREGVILPS 588
Query: 543 TPAAEGVSDDDMSKRQMLHEKKMTKLQS-PNFHVSRTRLVIYNLPKSMTEKGLKKLCIDA 601
PAA ++ D+ +R + + LQS P+ ++SRTRL + LP TE+ LK+L + A
Sbjct: 589 MPAAASLAPADLERRTNSYNARRKLLQSNPSLYISRTRLSVRQLPLFATERMLKRLAMHA 648
Query: 602 V-----------------------------------VSRASKQKPVIKQIKFL---QSLK 623
V +K P K+ KF Q +K
Sbjct: 649 VRTFEDEVKAGQREALTADELEERDEEADAAALKTSADAHAKDAPPKKRGKFTGRPQRVK 708
Query: 624 KGK----------VDTKHYSRGVAFVEFTEHQHALVALRVLNNN 657
+ K V + S+G F+E + H AL LR NNN
Sbjct: 709 QTKVIRQAERVDAVTGRARSKGYGFIEMSTHADALRVLRWANNN 752
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 129/334 (38%), Gaps = 75/334 (22%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVE--MKNGTSVGGRKIGVKHAMHRASLEQRRSK 58
+VT++G+ +G GYV FA+ EDA A + G + GR + V+ A
Sbjct: 70 VVTQQGTGVSKGVGYVSFAIKEDAQGAYDKIAAEGIKLNGRALRVEWA------------ 117
Query: 59 VTQEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQ 118
D +K D+K + H+ K A + S
Sbjct: 118 --------DTKKKDDSKPATVKPKAPHTPK--------------------APRAPISHDP 149
Query: 119 RVARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVL 178
RT++I GL + + + + SV +P E A+ K A+A
Sbjct: 150 NAIRTIVISGLPSGIDQKTLWKKVRKYDGAESVQWPASVGGAEDKSTAEAIFKTPAAATN 209
Query: 179 YTT------VKSACASVAL------LHQKEIKGGTVWARQLGGEGSKT-----QKWKLII 221
T K A SV L L K +K T + + T +LI+
Sbjct: 210 AVTKLHAHVFKGALLSVTLKKRLESLLSKPVKAKTATSDAKDKPSASTSTAPSHASRLIV 269
Query: 222 RNIPFKAKVNEIKDMFSPVGLVWNVYIPHNT-----------DTGLSKGFAFVKFTCKRD 270
RN+PF +++ +F P G ++++ IP + T KGFAFV K+D
Sbjct: 270 RNLPFDITEQDLRAIFLPYGPIYSITIPSASAPTTGEDADGRRTSGKKGFAFVWMMSKKD 329
Query: 271 AESAIQKFNGQKFG-----KRPIAVDWAVPKNIY 299
AE A+ NG K +R IAVDWA+ K+ +
Sbjct: 330 AERALAGCNGMKSTSLKKRERIIAVDWALSKDRW 363
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+P+ A +++ +FS + V + ++ TG+SKG +V F K DA+ A K
Sbjct: 41 LFVSNLPYAATSTDLQTLFSDIAPVRSAFVVTQQGTGVSKGVGYVSFAIKEDAQGAYDKI 100
Query: 279 --NGQKFGKRPIAVDWA 293
G K R + V+WA
Sbjct: 101 AAEGIKLNGRALRVEWA 117
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Query: 422 DELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAAT 481
D+ +T+F+ NLP+ + +++ FS V S V Q T KG G++ F E A
Sbjct: 35 DKHSSTLFVSNLPYAATSTDLQTLFSDIAPVRSAFVVTQQGTGVSKGVGYVSFAIKEDAQ 94
Query: 482 AAVSASKTTSGLGIFLKGRQLTVLKALDKK 511
A + GI L GR L V A KK
Sbjct: 95 GAYD---KIAAEGIKLNGRALRVEWADTKK 121
>gi|340518594|gb|EGR48835.1| predicted protein [Trichoderma reesei QM6a]
Length = 748
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 130/287 (45%), Gaps = 58/287 (20%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV- 484
+T+F+ NLPF +E+++ F FG+V V+ + T++P GTGF+ F A A +
Sbjct: 337 STVFVRNLPFTTTDEQLQSFFGHFGKVRYARVVIDKATEKPAGTGFVCFVDAADAKACIV 396
Query: 485 ----SASKTTSGL-------------GIF-LKGRQLTVLKALDK-KLAHDKEIDKSKNET 525
A G+ G + L GR L V +A+ + + AH E ++
Sbjct: 397 GAPRRAPPPAGGVKHSILQDENADPTGKYTLDGRVLQVAQAVGRNEAAHLAENSLAQRRQ 456
Query: 526 NDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQ--MLHEKKMTKLQSPNFHVSRTRLVIY 583
D R LYL EG + G+P ++D ++ RQ KK+ + ++P H+S TRL +
Sbjct: 457 KDKRRLYLLSEGSLGAGSPLRGLLTDAEVRMRQASAAQRKKLVE-KNPMLHISLTRLALR 515
Query: 584 NLPKSMTEKGLKKLCIDAVVSRA-----SKQKP--------------------------V 612
N+P + K LK+L AVV A +++P +
Sbjct: 516 NIPSDLGAKDLKELARKAVVGFAKDVKEGRRQPLSKEEIARDGKDAKEKEKERKLKRKGI 575
Query: 613 IKQIKFLQSLKKG----KVDTKHYSRGVAFVEFTEHQHALVALRVLN 655
+KQ K + KG + SRG F+E+T H+ AL+ LR LN
Sbjct: 576 VKQAKIVFEDNKGSKVSEASGAGKSRGYGFIEYTSHRWALMGLRYLN 622
>gi|440793396|gb|ELR14581.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 964
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 144/331 (43%), Gaps = 61/331 (18%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
++TKKG + G GYVQF + DA AV +G G ++ ++ A R E+ + +
Sbjct: 66 VITKKGERKCSGQGYVQFVMESDAAAAVRQYSGKPFKGSRVLIEVAKPRVRDEKEKRQPK 125
Query: 61 QEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGK---------TVKP------------- 98
+ V E++++ + +G + +K E GK KP
Sbjct: 126 KPV--EEVKQEDQDDEGALKDDGYDITKEDEIGKNEPKPVPTPVAKPIAKPVAKPAPPPK 183
Query: 99 ---RKAATLGIDLADKEDCSQKQRVARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPL 155
RK A L +E + ++ + VI+ GL + + + ++ G + S+TYPL
Sbjct: 184 REQRKPAP--APLPKREPPPKVEK--KVVIVSGLPTSVDEKALEKVLRKYGPITSITYPL 239
Query: 156 PKE-------ELEQHGLAQEGCKMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLG 208
KE E + A+ K C +V L G +
Sbjct: 240 GKENTVIAHVEFKDAKFAERASK-------------KCVNVPL-------GDRTISASFK 279
Query: 209 GEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCK 268
E + +LIIRN+PF+A ++ + F+ G + +V IP N +TG +GF FV+F K
Sbjct: 280 PE---KRDGRLIIRNLPFQATEADLSEKFAAHGKLVDVIIPKNKETGNPRGFGFVEFFTK 336
Query: 269 RDAESAIQKFNGQKFGKRPIAVDWAVPKNIY 299
+A +A++K N Q R +AVDW + + Y
Sbjct: 337 EEAANALEKVNAQPIRGRRVAVDWCLARESY 367
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 5 KGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVTQEVQ 64
K + RGFG+V+F E+A A+E N + GR++ V + R S + V
Sbjct: 320 KETGNPRGFGFVEFFTKEEAANALEKVNAQPIRGRRVAVDWCLARESY-------LKHVI 372
Query: 65 AEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPR 99
E+++ D KDG A K E KT KP+
Sbjct: 373 EEEVKAKSDKKDGEKKKAVKKEEVDEEDQKTKKPK 407
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/89 (20%), Positives = 47/89 (52%)
Query: 208 GGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTC 267
G + + ++ K+ +RN+ +++++FS VG + ++ G +V+F
Sbjct: 26 GKKAREPKRTKIFLRNLSEDTTSMDLEELFSDVGPIRRAFVITKKGERKCSGQGYVQFVM 85
Query: 268 KRDAESAIQKFNGQKFGKRPIAVDWAVPK 296
+ DA +A+++++G+ F + ++ A P+
Sbjct: 86 ESDAAAAVRQYSGKPFKGSRVLIEVAKPR 114
>gi|385305083|gb|EIF49077.1| nucleolar protein [Dekkera bruxellensis AWRI1499]
Length = 491
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 132/288 (45%), Gaps = 60/288 (20%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
IFI NLP+D E +++ F G++ +PV+ + T KGT F+ F+ + + +
Sbjct: 33 IFIRNLPYDATQEALEEHFKKLGDIKYALPVMDKETGLAKGTAFVAFENKQPYEECLLNA 92
Query: 488 KTTSGLGIFL----------KGRQLTVLKALDKKLA------HDK---EIDKSKNETNDH 528
+ L +GR + + A+D++ A H K E+ + D
Sbjct: 93 PXIPKDSVLLPDDVSPFYVFEGRVMQIAPAVDRESAXKLTERHAKARAELFGREPHERDK 152
Query: 529 RNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQS-PNFHVSRTRLVIYNLPK 587
R L+L EG I + A+ +S DM R+ ++ ++ +L S P+ H+S TRL I N+P+
Sbjct: 153 RRLFLLNEGRIAPESKLADLLSTTDMEIREQSYKARIQQLNSNPSLHLSMTRLAIRNIPR 212
Query: 588 SMTEKGLKKLCIDAVVSRAS-----KQKPVIKQ--------IKFL--------QSLKKGK 626
+ +K LK L A+V A K+ P+ K+ +++ + K GK
Sbjct: 213 AXNDKALKALGRKAIVEFAKEVKDGKRHPLNKEELDRSKKHAEWIDEKMGITPEDRKSGK 272
Query: 627 VDTKH-------------------YSRGVAFVEFTEHQHALVALRVLN 655
V +KH SRG F+EF +H+ AL+ALR LN
Sbjct: 273 VKSKHGVVVQSKIINEIKGSGEYGRSRGYGFLEFRDHRSALMALRWLN 320
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 212 SKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDA 271
++ +K+ + IRN+P+ A +++ F +G + + +TGL+KG AFV F K+
Sbjct: 26 NRQEKYCIFIRNLPYDATQEALEEHFKKLGDIKYALPVMDKETGLAKGTAFVAFENKQPY 85
Query: 272 ESAI 275
E +
Sbjct: 86 EECL 89
>gi|66826459|ref|XP_646584.1| hypothetical protein DDB_G0270156 [Dictyostelium discoideum AX4]
gi|60474491|gb|EAL72428.1| hypothetical protein DDB_G0270156 [Dictyostelium discoideum AX4]
Length = 900
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 134/277 (48%), Gaps = 43/277 (15%)
Query: 422 DELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAAT 481
DEL+ T+FI NL FD E++ +F +G++V VL ++T++P G F+K+ + A
Sbjct: 400 DELK-TLFIRNLAFDTKEEDLGAKFEEYGKLVFCRLVLDKLTQKPTGKAFVKYHEQDDAR 458
Query: 482 AAVSASKTT-----------------------------SGL---GIFLKGRQLTVLKALD 509
AV A +T S L G+ L GR L V A+D
Sbjct: 459 RAVEACSSTPLYDLSLEDKINKNQKDSKKESKKNSLSVSSLLQGGVMLDGRCLVVCYAVD 518
Query: 510 KKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQ 569
+ A + K E D +N +L G I++ + + + + D + R ++ TKL+
Sbjct: 519 HQQA--TAYKEKKVENVDKKNKHLLNIGKIIQNSAEGKELDEKDWALRNQADKENQTKLK 576
Query: 570 -SPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVD 628
+PN++VS TRL I NLP +T+ LK + + + K K V ++ + +V+
Sbjct: 577 VNPNYYVSPTRLCIRNLPLHVTDTILKNATMKILKTANIKDKVVFAKV----ACDNERVN 632
Query: 629 T--KHYSRGVAFVEFTEHQHALVALRVLNNNPSKLFY 663
K S+G AF+E + HQ AL L NNN SK+F+
Sbjct: 633 AQGKAKSKGFAFIECSTHQGALEILHKTNNN-SKIFF 668
>gi|350631988|gb|EHA20356.1| hypothetical protein ASPNIDRAFT_44327 [Aspergillus niger ATCC 1015]
Length = 722
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 133/298 (44%), Gaps = 68/298 (22%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
+TIFI NLPF D++ + + F+ FG + V+ T+RP+GTGF F + A A V
Sbjct: 309 STIFIRNLPFTCDDDMLYEHFTQFGPLRYARIVVDHETERPRGTGFACFWKPDDAAACVR 368
Query: 486 ---------------ASKTTSGL-------------GIF-LKGRQLTVLKALDKKLAHDK 516
A K ++ G + L+GR L V +A+ K A
Sbjct: 369 DAPKQQDTFVAEKDKAKKASTAYKHSILQNENADPTGRYTLEGRVLQVARAVSKSRASQL 428
Query: 517 E---IDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQ-SPN 572
E + + D R LYL EG I + + + +S ++ R+ ++++ ++ +P
Sbjct: 429 EEEGVSRRLVRDTDKRRLYLLSEGTIPQNSALYKKLSPSEIKMREDSYKQRQNFIKKNPA 488
Query: 573 FHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQ-------------IKFL 619
H+S TRL I N+P+ +T K LK+L A+ A K ++Q ++
Sbjct: 489 LHLSLTRLSIRNIPRHVTTKDLKQLARQAIAGFAEDAKKGLRQPLSKEELNRAADIMREA 548
Query: 620 QSLKKGK-----------VDTKH-----------YSRGVAFVEFTEHQHALVALRVLN 655
+ L+K K +T+ SRG F+E+ H+HAL+ALR LN
Sbjct: 549 EQLRKKKGVGVVRQAKIVFETRDGHKVGEDKAAGRSRGYGFIEYYTHRHALMALRWLN 606
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%)
Query: 211 GSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRD 270
S + +L IR++P + + FS ++ + + +T SKG+ FV F D
Sbjct: 32 ASNQPRRELFIRSLPASTTTESLTEYFSQSYVIKHAVAVTDPETKQSKGYGFVTFADIED 91
Query: 271 AESAIQKFNGQKFGKRPIAVDWAVPKN 297
A++A+++FNG F + I V++A P++
Sbjct: 92 AKAALEEFNGSVFEGKKIKVEYAQPRH 118
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 2 VTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHR 49
VT + + +G+G+V FA +EDA A+E NG+ G+KI V++A R
Sbjct: 70 VTDPETKQSKGYGFVTFADIEDAKAALEEFNGSVFEGKKIKVEYAQPR 117
Score = 39.3 bits (90), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 74/179 (41%), Gaps = 39/179 (21%)
Query: 413 KSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFL 472
K ++T ++ + +FI +LP E + + FS + V V TK+ KG GF+
Sbjct: 25 KPAQETPASNQPRRELFIRSLPASTTTESLTEYFSQSYVIKHAVAVTDPETKQSKGYGFV 84
Query: 473 KFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLY 532
F +E A AA+ G +G+++ V A + D+ + KSK
Sbjct: 85 TFADIEDAKAALEEFN-----GSVFEGKKIKVEYAQPRHRVVDENLGKSK---------- 129
Query: 533 LAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTE 591
P+AE + +++ E++ Q P +L++ NLP S+ E
Sbjct: 130 -----------PSAEAL------EQKKKREEQRAAAQPP-------KLIVRNLPWSIKE 164
>gi|145256511|ref|XP_001401421.1| ribosome biogenesis (Nop4) [Aspergillus niger CBS 513.88]
gi|134058324|emb|CAK38513.1| unnamed protein product [Aspergillus niger]
Length = 722
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 133/298 (44%), Gaps = 68/298 (22%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
+TIFI NLPF D++ + + F+ FG + V+ T+RP+GTGF F + A A V
Sbjct: 309 STIFIRNLPFTCDDDMLYEHFTQFGPLRYARIVVDHETERPRGTGFACFWKPDDAAACVR 368
Query: 486 ---------------ASKTTSGL-------------GIF-LKGRQLTVLKALDKKLAHDK 516
A K ++ G + L+GR L V +A+ K A
Sbjct: 369 DAPKQQDTFVAEKDKAKKASTAYKHSILQNENADPTGRYTLEGRVLQVARAVSKSRASQL 428
Query: 517 E---IDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQ-SPN 572
E + + D R LYL EG I + + + +S ++ R+ ++++ ++ +P
Sbjct: 429 EEEGVSRRLVRDTDKRRLYLLSEGTIPQNSALYKKLSPSEIKMREDSYKQRQNFIKKNPA 488
Query: 573 FHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQ-------------IKFL 619
H+S TRL I N+P+ +T K LK+L A+ A K ++Q ++
Sbjct: 489 LHLSLTRLSIRNIPRHVTTKDLKQLARQAIAGFAEDAKKGLRQPLSKEELNRAADIMREA 548
Query: 620 QSLKKGK-----------VDTKH-----------YSRGVAFVEFTEHQHALVALRVLN 655
+ L+K K +T+ SRG F+E+ H+HAL+ALR LN
Sbjct: 549 EQLRKKKGVGVVRQAKIVFETRDGHKVGEDKAAGRSRGYGFIEYYTHRHALMALRWLN 606
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%)
Query: 211 GSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRD 270
S + +L IR++P + + FS ++ + + +T SKG+ FV F D
Sbjct: 32 ASNQPRRELFIRSLPASTTTESLTEYFSQSYVIKHAVAVTDPETKQSKGYGFVTFADIED 91
Query: 271 AESAIQKFNGQKFGKRPIAVDWAVPKN 297
A++A+++FNG F + I V++A P++
Sbjct: 92 AKAALEEFNGSVFEGKKIKVEYAQPRH 118
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 2 VTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHR 49
VT + + +G+G+V FA +EDA A+E NG+ G+KI V++A R
Sbjct: 70 VTDPETKQSKGYGFVTFADIEDAKAALEEFNGSVFEGKKIKVEYAQPR 117
Score = 39.3 bits (90), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 74/179 (41%), Gaps = 39/179 (21%)
Query: 413 KSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFL 472
K ++T ++ + +FI +LP E + + FS + V V TK+ KG GF+
Sbjct: 25 KPAQETPASNQPRRELFIRSLPASTTTESLTEYFSQSYVIKHAVAVTDPETKQSKGYGFV 84
Query: 473 KFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLY 532
F +E A AA+ G +G+++ V A + D+ + KSK
Sbjct: 85 TFADIEDAKAALEEFN-----GSVFEGKKIKVEYAQPRHRVVDENLGKSK---------- 129
Query: 533 LAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTE 591
P+AE + +++ E++ Q P +L++ NLP S+ E
Sbjct: 130 -----------PSAEAL------EQKKKREEQRAAAQPP-------KLIVRNLPWSIKE 164
>gi|425781538|gb|EKV19498.1| Ribosome biogenesis (Nop4), putative [Penicillium digitatum PHI26]
gi|425782769|gb|EKV20659.1| Ribosome biogenesis (Nop4), putative [Penicillium digitatum Pd1]
Length = 722
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 137/297 (46%), Gaps = 68/297 (22%)
Query: 427 TIFICNLPFDLDNEEVKQRF-SAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
TIFI NLPF ++ + F + FG + VL T+RP+GTGF+ F E A +
Sbjct: 302 TIFIRNLPFSATDQALYDHFKTHFGPLRYARVVLDYETERPRGTGFVCFWKPEDANTCIR 361
Query: 486 AS--------------KTTSGL-------------GIF-LKGRQLTVLKALDKKLAHDKE 517
+ K+ + + G + L+GR L V +A+ K A E
Sbjct: 362 EAPRGAESMAPNKDKPKSNTAMKHSVLQDENSDPSGRYTLEGRVLQVARAVSKGQAAKLE 421
Query: 518 ---IDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL-QSPNF 573
+ + D R LYL EG I +P + ++ ++ R+ ++++ T + ++P
Sbjct: 422 EEGVSRRMVRDTDKRRLYLLNEGTIPSNSPLYKKLAPSEIKMREDSYKQRETFIKKNPAL 481
Query: 574 HVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS-----RASKQKPVIKQ--------IKFLQ 620
H+S TRL I NLP+ + K LK+L ++VV+ +A + P+ K+ +K L+
Sbjct: 482 HLSLTRLAIRNLPRHINSKDLKQLARESVVNFAKDVKAGARHPLSKEEQQRSRDTMKELE 541
Query: 621 SLKKGK-----------VDTKH-----------YSRGVAFVEFTEHQHALVALRVLN 655
L+K K +T+ SRG F+EF H+HAL++LR LN
Sbjct: 542 QLRKQKKMGIVRQAKVVFETREGTKVSEKTGGGRSRGYGFIEFFTHRHALMSLRWLN 598
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 218 KLIIRNIPFKAKVNE-IKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
KLI+RN+P+ K E + +F G V V +P G GF FV +++AE A+Q
Sbjct: 150 KLIVRNLPWSVKEPEDLNVLFRSFGKVKFVTLPKRN--GKLSGFGFVTMRGRKNAEKALQ 207
Query: 277 KFNGQKFGKRPIAVDWAVPKNIYSS 301
NG++ R IAVDWAV K+++ +
Sbjct: 208 MINGKEIDGRQIAVDWAVEKDVWET 232
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 202 VWARQLGGEGSKTQ-KWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGF 260
V A E S Q K L +R++P A + + FS ++ + + + +T +SKGF
Sbjct: 20 VEATTPAAEASAAQNKRTLFVRSLPTSATTESLAEHFSQSYIIKHAVVVSDKETKVSKGF 79
Query: 261 AFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWA 293
FV F DAESA+++FNG KF + I VD+A
Sbjct: 80 GFVTFADVEDAESALKEFNGSKFDGKIIRVDYA 112
>gi|242060348|ref|XP_002451463.1| hypothetical protein SORBIDRAFT_04g002355 [Sorghum bicolor]
gi|241931294|gb|EES04439.1| hypothetical protein SORBIDRAFT_04g002355 [Sorghum bicolor]
Length = 145
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 66/89 (74%)
Query: 122 RTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVLYTT 181
+ V+ GGL N+ +A EV R A IG+V SV YPL ++++E +GL Q+GC+ +A+++L+
Sbjct: 57 QAVVFGGLQNSGVAREVIRQAREIGSVLSVNYPLSEDKMELYGLTQDGCESNAASILFAD 116
Query: 182 VKSACASVALLHQKEIKGGTVWARQLGGE 210
VKSA ++V+ LH KE++G T+WAR LG E
Sbjct: 117 VKSAKSAVSCLHHKEVEGVTIWARPLGAE 145
>gi|121706512|ref|XP_001271518.1| ribosome biogenesis (Nop4), putative [Aspergillus clavatus NRRL 1]
gi|119399666|gb|EAW10092.1| ribosome biogenesis (Nop4), putative [Aspergillus clavatus NRRL 1]
Length = 735
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 130/310 (41%), Gaps = 81/310 (26%)
Query: 421 EDELQ-NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEA 479
EDE +TIFI NLPF +E + + F+ FG + V+ T+RP+GTGF+ F +E
Sbjct: 314 EDERNASTIFIRNLPFTCTDESLYEHFTQFGPLRYARIVVDPETERPRGTGFVCFWKMED 373
Query: 480 ATAAV-----------------SASKTTSGLGIF------------LKGRQLTVLKALDK 510
A + V S TT I L GR L V +A+ K
Sbjct: 374 AASCVRDAPKQQDTLIAEKDKGKKSSTTLKHSILQNENSDPSGRYTLDGRVLQVARAVSK 433
Query: 511 KLA---HDKEIDKSKNETNDHRNLYLAKEGLILEG-------TPAAEGVSDDDMSKRQML 560
A ++ + K D R L+L +EG I +P+ + +D +RQ
Sbjct: 434 SQATRLEEEGVSKRLVRDTDKRRLFLLQEGTISPSASLYKKLSPSEIKMREDSFKQRQNF 493
Query: 561 HEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS---------------- 604
K +P H+S TRL + N+P+ +T K LK+L AVV
Sbjct: 494 IRK------NPALHLSLTRLSVRNIPRHVTSKDLKQLARQAVVGFAKDAKEGLRQPLSKD 547
Query: 605 ---------------RASKQKPVIKQIKFLQSLKKG-KVDTKH---YSRGVAFVEFTEHQ 645
R K K +++Q K + + G K+ + SRG F+E+ H+
Sbjct: 548 ELKRSAEAMKEAEQHRKEKGKGIVRQTKIVYESRDGSKIGEETGAGRSRGYGFIEYYTHR 607
Query: 646 HALVALRVLN 655
HAL+ LR LN
Sbjct: 608 HALMGLRWLN 617
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 62/121 (51%), Gaps = 5/121 (4%)
Query: 214 TQKWKLIIRNIPFKAKVNE-IKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAE 272
TQ KLI+RN+P+ K E + F G V V +P D GF FV K++AE
Sbjct: 153 TQPPKLIVRNLPWSIKTPEDLAVHFRSFGKVKFVTLPKKGDQ--LAGFGFVVLRGKKNAE 210
Query: 273 SAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETA 332
A+Q NG++ R +AVDWAV K + + A + D ++GS+D D AE A
Sbjct: 211 KALQAVNGKEVDGRTLAVDWAVDKETWENLQKDATKEE--DNKEEAGSNDVEMADGAEAA 268
Query: 333 S 333
S
Sbjct: 269 S 269
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
Query: 210 EGSKTQ-KWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCK 268
E + TQ K L +R++P A + + FS ++ + ++ +T KG+ FV F
Sbjct: 35 EKASTQPKRTLFVRSLPASATTESLTEYFSQSYVIKHAIAVNDPETKQCKGYGFVTFADL 94
Query: 269 RDAESAIQKFNGQKFGKRPIAVDWAVPK------NIYSSGGAAAGVQNK 311
DA++A+++ NG F + I VD+A P+ N+ S +AA V+ K
Sbjct: 95 EDAQAAVKELNGSTFEGKKIRVDYAQPRHREIDENLGKSVPSAAAVELK 143
Score = 40.0 bits (92), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 11 RGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHR 49
+G+G+V FA +EDA AV+ NG++ G+KI V +A R
Sbjct: 84 KGYGFVTFADLEDAQAAVKELNGSTFEGKKIRVDYAQPR 122
>gi|258568356|ref|XP_002584922.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237906368|gb|EEP80769.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 745
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 128/299 (42%), Gaps = 67/299 (22%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV- 484
+TIFI NLPF +E + + F+ FG V V+ T RP+GT F+ F + A A +
Sbjct: 322 STIFIRNLPFGATDETLGEHFAQFGAVRYARVVVDPETDRPRGTAFVCFWKEDDAKACIR 381
Query: 485 -----------SASKTTSGLGI----------------FLKGRQLTVLKALDKKLAHDKE 517
SK S + I + GR L V +A+ +K A E
Sbjct: 382 EAPKRTDQGPSQESKHKSAIAIKKSVLEDEQTDPSGKYTMDGRVLQVSQAVSRKEAGRLE 441
Query: 518 IDKSKNETN---DHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQS-PNF 573
+ S D R LYL EG I +P +S ++ R+ +++ ++S P
Sbjct: 442 AEGSSRRDARDMDKRRLYLLSEGTIATNSPLYSKLSPSEVKMREASAKQRQKLIKSNPML 501
Query: 574 HVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS----------------------------- 604
H+S TRL + N+P+ + K LK+L +AVV
Sbjct: 502 HISLTRLSVRNIPRHIDSKALKQLAREAVVGFAKDVKSGLRQPLSREELSRSADLMKEQE 561
Query: 605 --RASKQKPVIKQIKFLQSLKKGKVDTKH----YSRGVAFVEFTEHQHALVALRVLNNN 657
R K K ++KQ K + ++G ++ SRG FVE++ H+ AL+ LR LN +
Sbjct: 562 TLRKIKGKGIVKQAKVIFEGREGSKISETAGAGRSRGYGFVEYSTHRSALMGLRWLNGH 620
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 215 QKWKLIIRNIPFKAKVNE-IKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAES 273
Q KLI+RN+P+ K E + +F G V + IP GF F+ K++AE
Sbjct: 157 QPPKLIVRNLPWSVKEPEQLAVLFRSYGKVKHADIPRKGTR--HSGFGFIVMRGKKNAEK 214
Query: 274 AIQKFNGQKFGKRPIAVDWAVPKNIY 299
AI+ NG++ R +AVDWAV K ++
Sbjct: 215 AIEGVNGKELDGRTLAVDWAVDKEVW 240
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +R++P A + + FS + + + T KG+ FV FT DA+ A+++
Sbjct: 48 LFVRSLPASATTESLTEYFSQSYPIKHATAVADPQTKQCKGYGFVTFTDVEDAQRALEEL 107
Query: 279 NGQKFGKRPIAVDWAVPKN 297
NG F R I ++ A P+
Sbjct: 108 NGSIFDGRKIVIEVAEPRR 126
Score = 38.9 bits (89), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 6/53 (11%)
Query: 11 RGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVTQEV 63
+G+G+V F +EDA RA+E NG+ GRKI ++ A E RR ++ ++V
Sbjct: 87 KGYGFVTFTDVEDAQRALEELNGSIFDGRKIVIEVA------EPRRREIDEKV 133
>gi|239606561|gb|EEQ83548.1| ribosome biogenesis protein Nop4 [Ajellomyces dermatitidis ER-3]
Length = 744
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 129/296 (43%), Gaps = 66/296 (22%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKF----------- 474
+TIFI NLPF +E + + F FG + V+ T RP+GT F+ F
Sbjct: 323 STIFIRNLPFSATDETLYEHFVQFGPLRYARVVVDPETDRPRGTAFVCFWKHEDAISCLR 382
Query: 475 --------KTVEAATAAVSASKTT-------SGLGIF-LKGRQLTVLKALDKKLAHDKEI 518
E + A +S K + LG + + GR L + A+ K A E
Sbjct: 383 DAPKRTDLPRAEESKAKISTIKHSVLEDENKDPLGKYTMDGRVLQLSLAVSKSQAAKLEA 442
Query: 519 DKSKNET---NDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQS-PNFH 574
+ S D R L+L EG I +P + +S +++ R+ +++ ++S P H
Sbjct: 443 EGSSRREARDKDKRRLFLLSEGTIPSNSPLYKQLSPTEIAMREASAKQRQKLIKSNPMLH 502
Query: 575 VSRTRLVIYNLPKSMTEKGLKKLCIDAVVS------------------------------ 604
+S TRL + N+P+++ K LK L +AVV
Sbjct: 503 ISLTRLSVRNIPRNIDSKALKALAREAVVGFAKDVKGGLREPLSKEELHRSTDDMKEEDK 562
Query: 605 -RASKQKPVIKQIKFLQSLKKG-KVDTKH---YSRGVAFVEFTEHQHALVALRVLN 655
R +K K +IKQ K + K+G KVD K SRG F+E+ H+ AL+ LR LN
Sbjct: 563 LRRAKGKGIIKQAKVVFEGKEGSKVDEKSGAGRSRGYGFIEYYSHRSALMGLRWLN 618
>gi|322788850|gb|EFZ14406.1| hypothetical protein SINV_08300 [Solenopsis invicta]
Length = 698
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 76/133 (57%), Gaps = 5/133 (3%)
Query: 527 DHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLP 586
D RNLYL KEG++L + AA VS DM KR L + K L++ N VSR RLVI+NLP
Sbjct: 405 DSRNLYLIKEGVVLAKSSAAAEVSVSDMEKRLKLEQWKSQMLRNLNMFVSRVRLVIHNLP 464
Query: 587 KSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQH 646
+ + L++L S K +IK+ + ++ LK K S+ FV FT H+
Sbjct: 465 PNFDDTKLRQL-----FKNHSGPKAIIKEARVMRDLKNVDATGKGKSKEYGFVAFTTHED 519
Query: 647 ALVALRVLNNNPS 659
AL ALR +NNNP+
Sbjct: 520 ALKALRSINNNPN 532
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Query: 215 QKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESA 274
Q ++I+RN+PFKA ++ + P G + + + D L G F+ F DA A
Sbjct: 39 QNSRIIVRNLPFKATEENVRRFYEPFGEIKEINLLKRPDGNLV-GCGFIHFKHVEDASKA 97
Query: 275 IQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASD 334
I N ++F R I+ DWA+ K+ + + N ++ D+ DA+ +
Sbjct: 98 IFNTNKKEFLGRTISSDWAISKSKFYEKLKEGLAE-----NLETDKDEGQTSQDAQEEDN 152
Query: 335 DSNSSEK 341
D NS +K
Sbjct: 153 DENSRKK 159
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
++IIRN+ F+ + +++ FS G + V I D G G F+++ ++A AI
Sbjct: 186 RIIIRNLDFQVTEDNLREHFSQYGELEEVKILTRPD-GKQTGVGFLQYNIVQNAAKAIHY 244
Query: 278 FNGQKFGKRPIAVDWAVPK 296
N Q RP+ VDWAVPK
Sbjct: 245 ANLQPLLNRPMIVDWAVPK 263
Score = 45.4 bits (106), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 108/279 (38%), Gaps = 68/279 (24%)
Query: 394 NESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVV 453
N KVSD + N S+ I + NLPF E V++ + FGE+
Sbjct: 25 NAEIKVSDTADANGQNSR----------------IIVRNLPFKATEENVRRFYEPFGEIK 68
Query: 454 SFVPVLHQVTKRPKGT----GFLKFKTVEAATAAVSASKTTSGLGIFLKG----RQLTVL 505
+ KRP G GF+ FK VE A+ A+ + LG + +
Sbjct: 69 EI-----NLLKRPDGNLVGCGFIHFKHVEDASKAIFNTNKKEFLGRTISSDWAISKSKFY 123
Query: 506 KALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKM 565
+ L + LA + E DK + +T + A+ +D+ S++++ EK
Sbjct: 124 EKLKEGLAENLETDKDEGQT-----------------SQDAQEEDNDENSRKKIRKEKDN 166
Query: 566 TKLQSPN------FHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFL 619
K Q R R++I NL +TE L++ Q ++++K L
Sbjct: 167 LKRQRKRKFDKMKKQKKRARIIIRNLDFQVTEDNLRE---------HFSQYGELEEVKIL 217
Query: 620 QSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
+ D K GV F+++ Q+A A+ N P
Sbjct: 218 -----TRPDGKQT--GVGFLQYNIVQNAAKAIHYANLQP 249
>gi|212528572|ref|XP_002144443.1| ribosome biogenesis (Nop4), putative [Talaromyces marneffei ATCC
18224]
gi|210073841|gb|EEA27928.1| ribosome biogenesis (Nop4), putative [Talaromyces marneffei ATCC
18224]
Length = 728
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 131/302 (43%), Gaps = 79/302 (26%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKF------------ 474
TIFI NLPF +E + + F FG + V+ T+RP+GTGF+ F
Sbjct: 317 TIFIRNLPFTSTDETLYEHFKQFGPLRYARIVVDHETERPRGTGFVCFWNAEDAIECLRG 376
Query: 475 --KTVEAATAAVSASKTTSGL-------------GIF-LKGRQLTVLKALDKKLAH---D 515
+ V+A ++ K ++ + G + ++ R L V A+ K A+ +
Sbjct: 377 APRQVDAGKEDTNSKKNSTSIKQSVLQNDMLDPTGKYTMEDRVLNVTLAVSKTEANKLTE 436
Query: 516 KEIDKSKNETNDHRNLYLAKEGLILEGT-------PAAEGVSDDDMSKRQMLHEKKMTKL 568
+ + + D R L+L EG I + PA + +D + +RQ L +
Sbjct: 437 EGVSRRSERDMDRRRLFLLNEGTINTASSLYKKLAPAEIKMREDSLKQRQNLIK------ 490
Query: 569 QSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS------------------------ 604
+P H+S TRL I N+P+++T K LK L +A+V
Sbjct: 491 NNPTLHLSLTRLSIRNIPRAVTSKDLKALAREAIVGFAKDAKEGRRQPLSPEELSRDSEE 550
Query: 605 -------RASKQKPVIKQIKFLQSLKKG-KVDTKH---YSRGVAFVEFTEHQHALVALRV 653
R K K ++KQ K + + G K+D K SRG F+E+ H+HAL+ LR
Sbjct: 551 TKGDDKRRREKGKGLVKQAKIVFEGRDGSKIDEKTGGGRSRGYGFIEYFSHRHALMGLRW 610
Query: 654 LN 655
LN
Sbjct: 611 LN 612
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 8/125 (6%)
Query: 210 EGSKTQKWKLIIRNIPFKAK-VNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCK 268
E +T +LI+RN+P+ K +++ +F G V + +P + + GF FV +
Sbjct: 153 EREQTAPPRLIVRNLPWTIKESDQLAALFRSFGKVKHAVVPKKGN--VQAGFGFVVLRGR 210
Query: 269 RDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDD 328
++AE A++ NG++ R +AVDWAV K+++ A K D + D+ D +DD
Sbjct: 211 KNAEKALEAVNGKEVDGRTLAVDWAVEKSVWEEAQQNA---EKKDVDEDAMEVD--AEDD 265
Query: 329 AETAS 333
ET +
Sbjct: 266 KETGA 270
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +R++P A ++ + FS ++ + + + +T SKG+ FV F DA+ A+++F
Sbjct: 49 LFVRSLPASATTEKLTEFFSQSYVLKHATVVIDPETKKSKGYGFVTFADIEDAQRALEEF 108
Query: 279 NGQKFGKRPIAVDWAVP--KNIYSSGG 303
NG F R I V+ A P + I GG
Sbjct: 109 NGADFEGRKIKVEVAQPRKREIDEKGG 135
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%)
Query: 11 RGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHR 49
+G+G+V FA +EDA RA+E NG GRKI V+ A R
Sbjct: 88 KGYGFVTFADIEDAQRALEEFNGADFEGRKIKVEVAQPR 126
>gi|358365933|dbj|GAA82554.1| ribosome biogenesis [Aspergillus kawachii IFO 4308]
Length = 721
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 133/298 (44%), Gaps = 68/298 (22%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKF----------- 474
+TIFI NLPF D++ + + F+ FG + V+ T+RP+GTGF F
Sbjct: 308 STIFIRNLPFTCDDDMLYEHFTQFGPLRYARIVVDHETERPRGTGFACFWKPDDAAACVR 367
Query: 475 --------------KTVEAATA---AVSASKTTSGLGIF-LKGRQLTVLKALDKKLAHDK 516
K+ +A+TA ++ ++ G + L+GR L V +A+ K A
Sbjct: 368 DAPKQQDPLVAEKDKSKKASTAYKHSILQNENADPTGRYTLEGRVLQVARAVSKSRASQL 427
Query: 517 E---IDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQ-SPN 572
E + + D R LYL EG I + + +S ++ R+ ++++ ++ +P
Sbjct: 428 EEEGVSRRLVRDTDKRRLYLLSEGTIPTNSALYKKLSPSEIKMREDSYKQRQNFIKKNPA 487
Query: 573 FHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQ-------------IKFL 619
H+S TRL + N+P+ +T K LK+L A+ A K ++Q ++
Sbjct: 488 LHLSLTRLSVRNIPRHVTTKDLKQLARQAIAGFAEDAKKGLRQPLSKDELNRAADIMREA 547
Query: 620 QSLKK----------------------GKVDTKHYSRGVAFVEFTEHQHALVALRVLN 655
+ L+K G+ SRG F+E+ H+HAL+ALR LN
Sbjct: 548 EQLRKKKGVGVVRQAKIVFETRDGHKVGEEKAAGRSRGYGFIEYYTHRHALMALRWLN 605
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 47/87 (54%)
Query: 211 GSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRD 270
S + +L +R++P + + FS ++ + + +T SKG+ FV F D
Sbjct: 32 ASNQPRRELFVRSLPASTTTESLTEYFSQSYVIKHAVAVTDPETKQSKGYGFVTFADLED 91
Query: 271 AESAIQKFNGQKFGKRPIAVDWAVPKN 297
A++A+++FNG F + I V++A P++
Sbjct: 92 AKAALEEFNGSVFEGKKIKVEYAQPRH 118
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 2 VTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHR 49
VT + + +G+G+V FA +EDA A+E NG+ G+KI V++A R
Sbjct: 70 VTDPETKQSKGYGFVTFADLEDAKAALEEFNGSVFEGKKIKVEYAQPR 117
>gi|443916594|gb|ELU37606.1| ribosomal processing [Rhizoctonia solani AG-1 IA]
Length = 931
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 136/315 (43%), Gaps = 84/315 (26%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAAT----- 481
T+F+ N+PF+ ++++ F AFG + + T R +GTGF+ F + A
Sbjct: 419 TLFVRNVPFEATEDDLRALFRAFGPLRYARITMDHETGRSRGTGFVCFWKKDDADAAIAE 478
Query: 482 ------------AAVSASKTTSGLG---------------IFLKGRQLTVLKALDKKLAH 514
A +SK + + L GR L+V +A+ + A
Sbjct: 479 AEAMAKELGMDKPAAGSSKAHNPFSMSLLTPDPSASLAKRLVLHGRTLSVARAVTRNEAD 538
Query: 515 D-KEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQS-PN 572
+E + E D RNLYL +EG+I + AA G+S+ +++ RQ + + L+S P+
Sbjct: 539 RLREEGERSREKQDKRNLYLMREGVIFPNSSAAAGLSEAELAARQTSFDARKALLRSNPS 598
Query: 573 FHVSRTRLVIYNLPKSMTEKGLKKLCIDAV------VSRASKQKPV-------------- 612
+VSRTR+ + LP +E+ LK+L I A+ VS + +++P+
Sbjct: 599 LYVSRTRISVRRLPLWASERVLKRLAIHAIREFEAEVS-SGEREPLTRDELHRDEPEPDN 657
Query: 613 ----------------------------IKQIKFLQSLKK-GKVDTKHYSRGVAFVEFTE 643
I+Q K +++ + V K SRG F+E +E
Sbjct: 658 NNNNNNNDISTETKSGKKNKGKKGRSTGIQQAKIVRAADRVDAVTGKGRSRGYGFIETSE 717
Query: 644 HQHALVALRVLNNNP 658
H AL LR +NN P
Sbjct: 718 HADALRVLRWVNNRP 732
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + N+P+ A +++ +FS V V + ++ + +T SKG A+V F K DA A++
Sbjct: 13 IFVSNLPYTATSTDVQTLFSDVAPVRSAFVVLDKETKASKGVAYVSFAIKEDASLALESE 72
Query: 279 NGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNS 316
+ R + + WA KN A GV + D +S
Sbjct: 73 KPFELDGRILRLQWADKKN-------AQGVAHNTDKDS 103
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
+TIF+ NLP+ + +V+ FS V S VL + TK KG ++ F E A+ A+
Sbjct: 11 STIFVSNLPYTATSTDVQTLFSDVAPVRSAFVVLDKETKASKGVAYVSFAIKEDASLALE 70
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKK----LAHDKEIDKSK 522
+ K L GR L L+ DKK +AH+ + D K
Sbjct: 71 SEKP-----FELDGRILR-LQWADKKNAQGVAHNTDKDSPK 105
>gi|320587701|gb|EFX00176.1| ribosome biogenesis protein [Grosmannia clavigera kw1407]
Length = 822
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 127/313 (40%), Gaps = 79/313 (25%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV-- 484
T+FI NLPF +E +K FS FG V V+ + T RP GTGF+ F E A V
Sbjct: 376 TLFIRNLPFTTSDEALKTHFSQFGAVRYARIVMDRATDRPAGTGFVCFFDGEVAQDCVRA 435
Query: 485 --------SASKTTSGLG---------------IFLKGRQLTVLKALDKKLAHDKEID-- 519
+A+ + + LG L GR L V +A+ K A +
Sbjct: 436 APRAAPASAAAASAAALGKRSVLQDERVDRDGRYTLDGRVLQVAQAVSKTEATQLATEGP 495
Query: 520 -KSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQS-PNFHVSR 577
+ D R L+L EG I GTP + +++ R+ +++ ++S P+ H+S
Sbjct: 496 GAQRVREKDKRRLFLLSEGTIAAGTPQHALLPPNEVQMREQSAKQRAAMVKSNPSLHLSL 555
Query: 578 TRLVIYNLPKSMTEKGLKKLCIDAVVS-------------------------------RA 606
TRL + N+P+ + KGLK+L AVV R
Sbjct: 556 TRLAVRNIPRHIDSKGLKELARRAVVGFATDVKAGLREPLSREELSRGGQLDREAEQRRR 615
Query: 607 SKQKPVIKQIKFL-------------------QSLKKGKVDTKHYSRGVAFVEFTEHQHA 647
+K V++Q K + K G+ SRG F+E+ H+ A
Sbjct: 616 AKGVGVVRQAKVVFESEQGSKVAESGSKNGKNSKTKDGEAAPVGRSRGYGFIEYWSHRWA 675
Query: 648 LVALRVLNNNPSK 660
L LR LN +P K
Sbjct: 676 LTGLRWLNGHPVK 688
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ +R++P A ++ + FS V + + + T S+G+ FV FT DA++A +K
Sbjct: 48 VFVRSLPSTATSEKLTEFFSEHFPVKHATVVTDPKTKESRGYGFVTFTDAEDAKAAKEKL 107
Query: 279 NGQKFGKRPIAVDWAVPKN 297
+ F R + +D A P++
Sbjct: 108 DNGLFDGRRLRLDIAEPRH 126
>gi|154270523|ref|XP_001536116.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150409920|gb|EDN05308.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 633
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 133/302 (44%), Gaps = 67/302 (22%)
Query: 421 EDELQ-NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKF-KTVE 478
EDE +T+FI NLPF+ ++ + + F FG + V+ T RP+GT F+ F K +
Sbjct: 261 EDERNASTVFIRNLPFNATDDSLYEHFVQFGPLRYARVVVDAETDRPRGTAFVCFWKNED 320
Query: 479 AATAAVSASKTTSGL-------------------------GIF-LKGRQLTVLKALDKKL 512
A + A K T L G + + GR L + A+ K
Sbjct: 321 AISCLRDAPKRTDLLRSEDSKPKMSTIKHSVLEDENKDPSGKYTMDGRVLQLSLAVSKSQ 380
Query: 513 AHDKEIDKSKNET---NDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQ 569
A E + S D R L+L EG I +P + +S +++ R+ +++ ++
Sbjct: 381 AAKFEAEGSSRRQARDKDKRRLFLLSEGTIPSNSPLYKQLSPSEIAMRETSAKQRQKLIK 440
Query: 570 S-PNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS------------------------ 604
S P H+S TRL + N+P+++ K LK L +AVV
Sbjct: 441 SNPMLHISLTRLSVRNIPRNIDSKALKALAREAVVGFAKDVKSGLREPLSKEELHRSTED 500
Query: 605 -------RASKQKPVIKQIKFLQSLKKG-KVDTKH---YSRGVAFVEFTEHQHALVALRV 653
R +K K +IKQ K + K+G KVD K SRG F+E+ H+ AL+ LR
Sbjct: 501 MKEADRLRKAKGKGIIKQAKVVFEGKEGSKVDEKSGAGRSRGYGFIEYYSHRSALMGLRW 560
Query: 654 LN 655
LN
Sbjct: 561 LN 562
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 105/224 (46%), Gaps = 27/224 (12%)
Query: 212 SKTQKWKLIIRNIPFK-AKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRD 270
++ Q KLIIRN+P+ A+ +++ ++F G V + IP GF FV +++
Sbjct: 147 TQAQPPKLIIRNLPWSIAEPDQLSNLFRSFGKVKHAVIPKRGTK--HSGFGFVVLRGRKN 204
Query: 271 AESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAE 330
AE A+ NG++ R +AVDWAV K+++ QN D D G ++D G E
Sbjct: 205 AEKALNAVNGKEVDGRTLAVDWAVEKSVWDE------FQNHTDDVIDEGVEEDAGKKIDE 258
Query: 331 TASDDSNSSEK--EDLPSNADFDE---------EVDIARKVLNKLTSTTGSLPSLSDDSA 379
D+ N+S +LP NA D + AR V++ T +A
Sbjct: 259 DVEDERNASTVFIRNLPFNATDDSLYEHFVQFGPLRYARVVVDAETDRPRG-------TA 311
Query: 380 LVKGNKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDE 423
V K +D+ + ++ K +D+ + SK K ++K + EDE
Sbjct: 312 FVCFWKNEDAISCLRDAPKRTDLLRSEDSKPKMSTIKHSVLEDE 355
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 211 GSKTQKWK----LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFT 266
GS QK K L +R++P A + + FS + + + + T SKG+ FV F
Sbjct: 32 GSSLQKPKSRRTLFVRSLPASATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYGFVTFA 91
Query: 267 CKRDAESAIQKFNGQKFGKRPIAVDWAVPKN 297
DA A+++FNG F R + ++ A P++
Sbjct: 92 DHEDAAKALEEFNGSDFDGRKLKIEVAEPRH 122
>gi|340059805|emb|CCC54201.1| putative RNA-binding protein [Trypanosoma vivax Y486]
Length = 421
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 133/293 (45%), Gaps = 50/293 (17%)
Query: 422 DELQNTIFICNLPFDLDNEEVKQRF-SAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAA 480
D L+ +F+ LP D +E+ + F S FG V + V ++ TK GT F+ +V+ A
Sbjct: 89 DPLETQLFLKGLPLDTSEDELMRFFESRFGRVSRVLLVRNRSTKMLAGTCFVHCGSVDMA 148
Query: 481 ----------TAAVSASKTTSGLG----------------------------IFLKGRQL 502
+S+S T L + L+ +
Sbjct: 149 EKIFEHAQLNARELSSSDRTEFLDKTKDMSHCQAKRLRFKMRADAFMAREPFMTLRETRF 208
Query: 503 TVLKALDKK------LAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSK 556
TV + L +K A K+ ++K +D R +EGLIL TPAA G+ +
Sbjct: 209 TVHRVLSRKDSQETTAALQKKKKRTKVAADDPRPPVFVQEGLILPDTPAARGLHPRYLGM 268
Query: 557 RQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQI 616
Q+ +E + +L+ N VS TRL + NLP+++ E+ L+ L V K K +++
Sbjct: 269 IQLDYEARKNQLRDSNMFVSTTRLSVRNLPRTVDERELRTLFSSHVRVFLKKHKEWVEKD 328
Query: 617 KF--LQSLKKGKV--DTKHYSRGVAFVEFTEHQHALVALRVLNNNPSKLFYHH 665
K+ +K K+ D+ S+G AF+EF H AL ALR +NNNP+ +F H
Sbjct: 329 KWGKFGPIKNVKIVRDSAGTSKGYAFIEFINHPIALHALRAVNNNPT-IFGDH 380
>gi|261193242|ref|XP_002623027.1| ribosome biogenesis protein Nop4 [Ajellomyces dermatitidis
SLH14081]
gi|239589162|gb|EEQ71805.1| ribosome biogenesis protein Nop4 [Ajellomyces dermatitidis
SLH14081]
gi|327356849|gb|EGE85706.1| ribosome biogenesis protein Nop4 [Ajellomyces dermatitidis ATCC
18188]
Length = 744
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 128/296 (43%), Gaps = 66/296 (22%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
+TIFI NLPF +E + + F FG + V+ T RP+GT F+ F E A + +
Sbjct: 323 STIFIRNLPFSATDETLYEHFVQFGPLRYARVVVDPETDRPRGTAFVCFWKHEDAISCLR 382
Query: 486 ASKTTSGL--------------------------GIF-LKGRQLTVLKALDKKLAHDKEI 518
+ + L G + + GR L + A+ K A E
Sbjct: 383 DAPKRTDLPRAEESKAKISTIKHSVLEDENKDPSGKYTMDGRVLQLSLAVSKSQAAKLEA 442
Query: 519 DKSKNET---NDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQS-PNFH 574
+ S D R L+L EG I +P + +S +++ R+ +++ ++S P H
Sbjct: 443 EGSSRREARDKDKRRLFLLSEGTIPSNSPLYKQLSPTEIAMREASAKQRQKLIKSNPMLH 502
Query: 575 VSRTRLVIYNLPKSMTEKGLKKLCIDAVVS------------------------------ 604
+S TRL + N+P+++ K LK L +AVV
Sbjct: 503 ISLTRLSVRNIPRNIDSKALKALAREAVVGFAKDVKGGLREPLSKEELHRSTDDMKEEDK 562
Query: 605 -RASKQKPVIKQIKFLQSLKKG-KVDTKH---YSRGVAFVEFTEHQHALVALRVLN 655
R +K K +IKQ K + K+G KVD K SRG F+E+ H+ AL+ LR LN
Sbjct: 563 LRRAKGKGIIKQAKVVFEGKEGSKVDEKSGAGRSRGYGFIEYYSHRSALMGLRWLN 618
Score = 45.4 bits (106), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +R++P A + + FS + + + + T SKG+ FV F DA A+++F
Sbjct: 51 LFVRSLPASATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYGFVTFADHEDAAKALEEF 110
Query: 279 NGQKFGKRPIAVDWAVPKN--IYSSGGAAAGVQN 310
NG F + + ++ A P++ I GG + N
Sbjct: 111 NGSVFDGKKLKIEVAEPRHREIDEKGGKSVSTSN 144
>gi|389742624|gb|EIM83810.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 973
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 101/213 (47%), Gaps = 31/213 (14%)
Query: 423 ELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATA 482
E T+F+ N+PF+ +E++ F AFG + L + R +GTGF F E A
Sbjct: 501 ETGTTLFVRNVPFEATEDELRTLFRAFGPLRYARITLDPASGRSRGTGFACFWNKEDADK 560
Query: 483 AVSAS-----KTTSGL------------------------GIFLKGRQLTVLKALDKKLA 513
AV S +TT G + L GR L V++A+ + A
Sbjct: 561 AVDQSNILRAETTGGPDVPKKNPFTMPSILTFDPSAASAQSLVLHGRTLDVVRAVTRDEA 620
Query: 514 HD-KEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKR-QMLHEKKMTKLQSP 571
KE + E D RN+YL +EG+IL TPAA + ++ KR + ++ +P
Sbjct: 621 GKLKEAGEKAREKADKRNMYLLREGVILPNTPAAANLPAVEIEKRTNSFNARRQLLRTNP 680
Query: 572 NFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS 604
+ +S+TRL I +P +TE+ LK+L I A+ S
Sbjct: 681 SLFISKTRLSIRQIPIFVTERMLKRLAIHAMRS 713
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 209 GEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCK 268
GE S+ L + N+P+ A +++ +FS + V + ++ TG SKG +V F+ +
Sbjct: 13 GEASEVHGSTLFVSNLPYTATSTDLQTLFSDIAPVRSAFVVLEQGTGTSKGVGYVAFSIR 72
Query: 269 RDAESAIQKF--NGQKFGKRPIAVDWAVPKNIYSSGG 303
DA+ A + +G R + V WA K GG
Sbjct: 73 EDAQLAYDQVEKDGISLAGRGLRVTWASNKPRREKGG 109
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +RN+PF+A +E++ +F G + I + +G S+G F F K DA+ A+ +
Sbjct: 506 LFVRNVPFEATEDELRTLFRAFGPLRYARITLDPASGRSRGTGFACFWNKEDADKAVDQS 565
Query: 279 N 279
N
Sbjct: 566 N 566
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 407 SSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRP 466
S+ K K ++ E + +T+F+ NLP+ + +++ FS V S VL Q T
Sbjct: 2 STLGKRKDREEGEASEVHGSTLFVSNLPYTATSTDLQTLFSDIAPVRSAFVVLEQGTGTS 61
Query: 467 KGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDK 510
KG G++ F E A A + GI L GR L V A +K
Sbjct: 62 KGVGYVAFSIREDAQLAYDQVEKD---GISLAGRGLRVTWASNK 102
>gi|123381672|ref|XP_001298597.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121879212|gb|EAX85667.1| hypothetical protein TVAG_593040 [Trichomonas vaginalis G3]
Length = 313
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 80/138 (57%), Gaps = 5/138 (3%)
Query: 524 ETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIY 583
E D RNL+L EG I G AAEGVSD DM+KR+ L E K KL N+ + TRL +
Sbjct: 110 EKKDKRNLHLMWEGHIKPGDAAAEGVSDADMAKRKRLFETKQKKLADTNYSIVPTRLCVM 169
Query: 584 NLPKSMTEKGLKKLCIDAV--VSRASKQKPVIKQIKFLQS-LKKGKVDTKHYSRGVAFVE 640
N+P + ++K+ A SR K P+ + K ++S ++ +V +G+ FVE
Sbjct: 170 NVPDGINAGRVRKIFAVASQRYSRNHKDDPMCR--KAMKSPVRITEVRKIEDQKGLFFVE 227
Query: 641 FTEHQHALVALRVLNNNP 658
F++H+H L ALR +NNNP
Sbjct: 228 FSQHEHTLCALRQVNNNP 245
>gi|242766029|ref|XP_002341092.1| ribosome biogenesis (Nop4), putative [Talaromyces stipitatus ATCC
10500]
gi|218724288|gb|EED23705.1| ribosome biogenesis (Nop4), putative [Talaromyces stipitatus ATCC
10500]
Length = 715
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 125/297 (42%), Gaps = 75/297 (25%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
+TIFI NLPF +E + + F FG P+ + +RP+GTGF+ F E A +
Sbjct: 311 STIFIRNLPFTTTDESLYEHFKQFG------PLRY--AQRPRGTGFVCFWKAEDAIECLR 362
Query: 486 ASKTTSGLG----------------------------IFLKGRQLTVLKALDKKLAH--- 514
+ G ++ R L V A+ K A+
Sbjct: 363 GAPRQVDAGKEDAHSKKHSTSIKQSVLQNDMLDPSGKYTIEDRVLNVTLAVSKTEANKLT 422
Query: 515 DKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQ-MLHEKKMTKLQSPNF 573
++ + + D R L+L EG I +P + ++ ++ R+ L +++ +P
Sbjct: 423 EEGVSRRSERDKDRRRLFLLNEGTINTSSPLYKKLAPSEIKMREDSLKQRQNLIKNNPTL 482
Query: 574 HVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS----------------------------- 604
H+S TRL I N+P+S+T K LK L +AVV
Sbjct: 483 HLSLTRLSIRNIPRSVTSKDLKALAREAVVGFAKDAKEGRRQPLSTDELSRDSEETKVDD 542
Query: 605 --RASKQKPVIKQIKFLQSLKKG-KVDTKH---YSRGVAFVEFTEHQHALVALRVLN 655
R K K ++KQ K + + G K++ K SRG FVE+ H+HAL+ LR LN
Sbjct: 543 KRRREKGKGIVKQAKIVFEGRDGSKIEEKTGAGRSRGYGFVEYYTHRHALMGLRWLN 599
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 213 KTQKWKLIIRNIPFKAK-VNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDA 271
+TQ KLI+RN+P+ K +++ +F G V + +P + + GF FV +++A
Sbjct: 156 QTQPPKLIVRNLPWTIKDSDQLAALFRSFGKVKHAVVPKKGN--VQAGFGFVVLRGRKNA 213
Query: 272 ESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAA 306
E A++ NG++ R +AVDWAV KN++ A
Sbjct: 214 EKALEAVNGKEIDGRTLAVDWAVEKNVWEEAQQTA 248
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +R++P A ++ FS ++ + + + +T SKG+ FV F DA+ A+++F
Sbjct: 49 LFVRSLPASATTEKLTGFFSQSYVIKHATVVIDPETKQSKGYGFVTFADIEDAQRALEEF 108
Query: 279 NGQKFGKRPIAVDWAVPK 296
NG +F R I V+ A P+
Sbjct: 109 NGVEFEGRKIKVEVAQPR 126
Score = 42.4 bits (98), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 7 SNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHR 49
+ + +G+G+V FA +EDA RA+E NG GRKI V+ A R
Sbjct: 84 TKQSKGYGFVTFADIEDAQRALEEFNGVEFEGRKIKVEVAQPR 126
>gi|169856953|ref|XP_001835130.1| RNA-binding domain-containing protein [Coprinopsis cinerea
okayama7#130]
gi|116503877|gb|EAU86772.1| ribosomal processing [Coprinopsis cinerea okayama7#130]
Length = 987
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 105/207 (50%), Gaps = 31/207 (14%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGF--------------- 471
T+FI N+P++ ++++ F AFG + + T R +GTGF
Sbjct: 502 TLFIRNVPWEATEDDLRTLFRAFGPLRYARITMDPETGRSRGTGFACFWNKEDADKVIEQ 561
Query: 472 ---LKFKTV-EAATA--------AVSASKTTSGLG--IFLKGRQLTVLKALDKKLAHD-K 516
LK +T+ +AAT ++ +S L + L GR L V++A+ + +A K
Sbjct: 562 SDILKAETMGQAATPKKNPFSLPSILTPDPSSSLARTLVLHGRTLDVVRAVTRDVASRLK 621
Query: 517 EIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQS-PNFHV 575
E + E D RN+YL +EG+I +PAA + ++ +R + + + L+S P+ +V
Sbjct: 622 EEGEKLREKQDKRNMYLLREGVIFPNSPAAAHLPPAELERRNLSYNSRKALLKSNPSLYV 681
Query: 576 SRTRLVIYNLPKSMTEKGLKKLCIDAV 602
SRTRL I LP TE+ LK+L I A+
Sbjct: 682 SRTRLSIRQLPIFATERMLKRLAIHAI 708
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 208 GGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTC 267
GG GS L + N+P+ A +++ +FS + V + ++ TG+SKG +V F
Sbjct: 19 GGHGST-----LFVSNLPYTATSVDLQTLFSDIAPVRSAFVVTEQGTGVSKGVGYVSFAL 73
Query: 268 KRDAESAIQKFN--GQKFGKRPIAVDWAVPKN 297
K DAES K + G RPI WA KN
Sbjct: 74 KEDAESCYTKISEEGLTLAGRPIRAQWADKKN 105
>gi|226293059|gb|EEH48479.1| nucleolar protein [Paracoccidioides brasiliensis Pb18]
Length = 691
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 132/302 (43%), Gaps = 68/302 (22%)
Query: 421 EDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKF------ 474
+D +T+FI NLPF +E + + F FG + V T RP+GT F+ F
Sbjct: 268 DDRNASTVFIRNLPFTATDESLYEHFVQFGPLRYARVVFDPETDRPRGTAFVCFWDKKNA 327
Query: 475 ----------------KTVEAATAAVSAS------KTTSGLGIFLKGRQLTVLKALDKKL 512
+ +A T+ + S K SG + GR L + A+ K
Sbjct: 328 NSCLRDAPKRTDLPRAEDAKAKTSTIKYSVLEDEKKDPSGR-YTMDGRVLQLSPAVSKSQ 386
Query: 513 AHDKEID-KSKNETNDH--RNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQ 569
A E + S+ ET D R L+L EG I + + +S +++ R+ +++ ++
Sbjct: 387 AVKLEAEGSSRRETRDKDKRRLFLLSEGTIPSTSALYKQLSPSEIAMREASAKQRQKLIK 446
Query: 570 S-PNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS------------------------ 604
S P H+S TRL + NLP+++ K LK L +AVV
Sbjct: 447 SNPVLHLSLTRLSVRNLPRNIDSKALKALAREAVVGFAKDVKSGLREPLSREELQRSNED 506
Query: 605 -------RASKQKPVIKQIKFLQSLKKG-KVDTKH---YSRGVAFVEFTEHQHALVALRV 653
R SK K +I+Q K + K+G K+D K SRG F+E+ H+ AL+ LR
Sbjct: 507 MKEAEKLRKSKGKGIIRQAKVVFEGKEGSKIDEKSGAGRSRGYGFIEYYSHRSALMGLRW 566
Query: 654 LN 655
LN
Sbjct: 567 LN 568
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 65/126 (51%), Gaps = 9/126 (7%)
Query: 215 QKWKLIIRNIPFK-AKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAES 273
Q KLIIRN+P+ A+ +++ +F G V IP + GF FV +++AE
Sbjct: 156 QPPKLIIRNLPWSIAEPEQLEVLFRSFGKVKYAVIPKKGNK--HSGFGFVVLRGRKNAEK 213
Query: 274 AIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETAS 333
A++ NG++ R +AVDWA KN++ +QN DG D+G++ +
Sbjct: 214 ALEAVNGKEVDGRTLAVDWAAEKNVWDE------LQNHTDGVKDNGTEKEDNKKVHAEVE 267
Query: 334 DDSNSS 339
DD N+S
Sbjct: 268 DDRNAS 273
Score = 45.4 bits (106), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +R++P A + D FS + + + + T SKG+ FV F D A+++F
Sbjct: 50 LFVRSLPLSATTESLTDYFSQSYPLKHATVVLDPQTKQSKGYGFVTFADSEDVARALEEF 109
Query: 279 NGQKFGKRPIAVDWAVPKN 297
NG F + + ++ A P++
Sbjct: 110 NGSVFDGKKLKIEVAEPRH 128
>gi|353245170|emb|CCA76234.1| related to Nucleolar protein NOP4 [Piriformospora indica DSM 11827]
Length = 850
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 32/207 (15%)
Query: 423 ELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATA 482
E T+FI N+P++ +E++Q FG + V+ Q + R KGT F + E A
Sbjct: 373 EAGTTLFIRNVPWEATEDEMRQLLRGFGPLRYVRIVIDQESGRSKGTAFACYWNKEDADK 432
Query: 483 AVSASKT---TSGLG-------------------------IFLKGRQLTVLKALDKKLAH 514
++AS+T SG+ + + GR L V++A+ ++ A
Sbjct: 433 VITASETLNKESGVNASPIKNPFSAPSLLTPDPSSSLARNLVVHGRTLDVVRAVTRETA- 491
Query: 515 DKEIDKS--KNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQS-P 571
DK D E D RNLYL +EG+I +PAA ++ ++ KR ++ T L++ P
Sbjct: 492 DKLRDAGVKMREKADKRNLYLMREGVIFPNSPAASTITPTELEKRVNAFNQRRTLLRTNP 551
Query: 572 NFHVSRTRLVIYNLPKSMTEKGLKKLC 598
+ +VS+TRL I LP ++E+ LK+L
Sbjct: 552 SLYVSKTRLSIRQLPTFVSERSLKRLA 578
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 131/311 (42%), Gaps = 71/311 (22%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
+V +K + +G GYV F++ EDA + VE K + GR + V A +
Sbjct: 57 VVLEKETKVSKGVGYVTFSLREDAEQCVE-KGSVEMNGRMLRVSWAAAKG---------- 105
Query: 61 QEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQRV 120
E G+ +P+ + + +D +
Sbjct: 106 ------------------------------EQGENAQPKGQRPSKVVRSPVKDKAHDATA 135
Query: 121 ARTVIIGGLLNAD----MAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASA 176
RT+II GL + ++V + G+ E LE +G + A
Sbjct: 136 VRTIIITGLPTGIDSKVLWKKVRKQEGA-------------ETLEFPFKNVDGSEDPTKA 182
Query: 177 -VLYTTVKSACASVALLHQKEIKG---GTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNE 232
V++T+ A +V L+ KG G ++L + +++ + LI+RN+P+ ++
Sbjct: 183 NVVFTSPTQALHAVEKLNAHVYKGSLLGVTLKKRLEKKPNRSSR--LIVRNLPWDTTDSD 240
Query: 233 IKDMFSPVGLVWNVYIP-------HNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGK 285
++ +F P G V+++ IP H +KGFAFV + DAE AI+ NG+ +
Sbjct: 241 LRALFLPHGAVYSIEIPTDKVDGQHEGRKPKAKGFAFVWMLSRADAEKAIEGVNGKSLKE 300
Query: 286 RPIAVDWAVPK 296
RP+AVDWA+ K
Sbjct: 301 RPLAVDWALSK 311
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 122/325 (37%), Gaps = 74/325 (22%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ I N+P+ A ++K FS + + N ++ +T +SKG +V F+ + DAE ++K
Sbjct: 28 VFISNLPYTATSTDLKTHFSDIAPIKNAFVVLEKETKVSKGVGYVTFSLREDAEQCVEKG 87
Query: 279 NGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDDSNS 338
+ + G R + V WA AA G Q + N+
Sbjct: 88 SVEMNG-RMLRVSWA----------AAKGEQGE-------------------------NA 111
Query: 339 SEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTVNESAK 398
K PS D A T LP+ D L K ++Q+ +T+ K
Sbjct: 112 QPKGQRPSKVVRSPVKDKAHDATAVRTIIITGLPTGIDSKVLWKKVRKQEGAETLEFPFK 171
Query: 399 VSD---------------------VSKLNSSKSKPKSL-----KQTEGEDELQNTIFICN 432
D V KLN+ K L K+ E + + + + N
Sbjct: 172 NVDGSEDPTKANVVFTSPTQALHAVEKLNAHVYKGSLLGVTLKKRLEKKPNRSSRLIVRN 231
Query: 433 LPFDLDNEEVKQRFSAFGEVVSF-VPV-----LHQVTKRPKGTGFLKFKTVEAATAAVSA 486
LP+D + +++ F G V S +P H+ ++PK GF + A A
Sbjct: 232 LPWDTTDSDLRALFLPHGAVYSIEIPTDKVDGQHE-GRKPKAKGFAFVWMLSRA----DA 286
Query: 487 SKTTSGL-GIFLKGRQLTVLKALDK 510
K G+ G LK R L V AL K
Sbjct: 287 EKAIEGVNGKSLKERPLAVDWALSK 311
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
+T+FI NLP+ + ++K FS + + VL + TK KG G++ F E A V
Sbjct: 26 STVFISNLPYTATSTDLKTHFSDIAPIKNAFVVLEKETKVSKGVGYVTFSLREDAEQCVE 85
Query: 486 ASKTTSGLGIFLKGRQLTV 504
+ + GR L V
Sbjct: 86 KG------SVEMNGRMLRV 98
>gi|209875813|ref|XP_002139349.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209554955|gb|EEA05000.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 408
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 106/210 (50%), Gaps = 32/210 (15%)
Query: 427 TIFICNLPFDLDNEEVKQRFSA-FGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
TIF+ N+PF ++KQ F FG+V+ VL + T PKG F+KF+ +EA +
Sbjct: 26 TIFLRNIPFGTSESDLKQFFEERFGKVIYARIVLSRSTHLPKGVAFVKFRDLEAVKHVLD 85
Query: 486 AS--------KTTS-------------------GLGIFLKGRQLTVLKALDKKLAHD--K 516
A+ KT + +GI + GR++ A+ D
Sbjct: 86 ANDEANQYIVKTKNMNMTNKSSCTYLESLALPPNVGIQINGRRIYAQIAVKPSELADISS 145
Query: 517 EIDKSKNE--TNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFH 574
+ D NE + N +LAK G+IL GT A G+S++D+ +R+ ++ KL++PNF
Sbjct: 146 KKDTCMNEGIIKSNNNGHLAKFGVILRGTNEAVGLSENDLRRREDAWLERKVKLKNPNFI 205
Query: 575 VSRTRLVIYNLPKSMTEKGLKKLCIDAVVS 604
V+ RL I NLPK+++ L+K+ ID + S
Sbjct: 206 VNPFRLCIRNLPKTVSAVELRKIVIDCITS 235
>gi|449305095|gb|EMD01102.1| hypothetical protein BAUCODRAFT_118813 [Baudoinia compniacensis
UAMH 10762]
Length = 809
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 131/300 (43%), Gaps = 69/300 (23%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
+T+F+ NLPF +E+++ F+ FG V V+ T+R KGT F+ F A A +
Sbjct: 368 STLFVRNLPFICTDEDLEDHFTRFGAVRYARVVMDAGTERSKGTAFVCFYNTSDADACLR 427
Query: 486 ----------ASKTTSG-----------------LGIF-LKGRQLTVLKALDK----KLA 513
A K G G + L GR L + +A+DK +L
Sbjct: 428 NAPRRTMPTDAEKAKQGRDPQNAPSILQNTDADPTGQYTLDGRVLQLSRAVDKSEANRLT 487
Query: 514 HDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQS-PN 572
+ + + K + ND R LYL EG I + E +S + + R+ ++ T ++S P+
Sbjct: 488 TEGAVYRGKRD-NDKRRLYLLAEGTISHKSQLWEKLSPSEKTMREASARQRKTLIESNPS 546
Query: 573 FHVSRTRLVIYNLPKSMTEKGLKKLCIDAVV----------------------------- 603
H+S TRL + NLP+S+ K LK L +AVV
Sbjct: 547 LHLSLTRLSLRNLPRSIGSKELKALAREAVVGFATDVKNGVREKLSKEELARGGDEMIAA 606
Query: 604 --SRASKQKPVIKQIKFLQSLKKG-KVDTKH---YSRGVAFVEFTEHQHALVALRVLNNN 657
+R K ++KQ K + G KV + SRG FVE+ H+ AL+ LR LN +
Sbjct: 607 EAARKRAGKGLVKQAKVVFEGSSGSKVQEETGAGRSRGYGFVEYYTHRSALMGLRWLNGH 666
>gi|392586157|gb|EIW75494.1| hypothetical protein CONPUDRAFT_147133 [Coniophora puteana
RWD-64-598 SS2]
Length = 1285
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 36/216 (16%)
Query: 423 ELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATA 482
++ T+F+ N+PF+ +E++ F AFG + + T R +GTGF F E A A
Sbjct: 577 DVGTTLFVRNIPFEATEDELRTLFRAFGPLRYARITVDTATGRSRGTGFACFWNREDADA 636
Query: 483 AVSAS----KTTSGL------------------------------GIFLKGRQLTVLKAL 508
+ + K T G G+ L R L V++A+
Sbjct: 637 VLERADAIRKETEGTDDKQPNPNAKRDHRVLPSILTADPSAPLTRGLVLHSRTLDVVRAV 696
Query: 509 DKKLAHDKEIDKSK-NETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTK 567
++ A D + E D RN+YL +EG+IL PAA ++ ++ KR + +
Sbjct: 697 TRESAAKLAADGVRAREKADKRNMYLLREGVILPNMPAASSLTPAEVDKRTKSFDARRVL 756
Query: 568 LQS-PNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAV 602
L+S P +VSRTRL + +P ++E+GL++L + A+
Sbjct: 757 LRSNPALYVSRTRLSVRQIPLYVSERGLRRLAVHAM 792
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 418 TEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTV 477
TE + E +T+F+ NLP+ + +++ FS V S V Q T KG G++ F
Sbjct: 22 TEPKSEHGSTLFVSNLPYTATSTDLQTLFSDLAPVRSAFVVTEQGTGVSKGVGYVAFSAR 81
Query: 478 EAATAAVSASKTTSGLGIFLKGRQLTVLKALDKK 511
E A A+ + + GI L GR+L V A DKK
Sbjct: 82 EGAQVALD---SVNEEGIVLDGRKLRVTWA-DKK 111
Score = 45.8 bits (107), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
L +RNIPF+A +E++ +F G + I +T TG S+G F F + DA++ +++
Sbjct: 582 LFVRNIPFEATEDELRTLFRAFGPLRYARITVDTATGRSRGTGFACFWNREDADAVLER 640
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+P+ A +++ +FS + V + ++ TG+SKG +V F+ + A+ A+
Sbjct: 32 LFVSNLPYTATSTDLQTLFSDLAPVRSAFVVTEQGTGVSKGVGYVAFSAREGAQVALDSV 91
Query: 279 N--GQKFGKRPIAVDWA 293
N G R + V WA
Sbjct: 92 NEEGIVLDGRKLRVTWA 108
>gi|452822102|gb|EME29125.1| RNA-binding protein [Galdieria sulphuraria]
Length = 639
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 123/272 (45%), Gaps = 33/272 (12%)
Query: 425 QNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV 484
+ TI I NLP + +++ F AFG++ + T + G +++F + +
Sbjct: 354 KRTILIRNLPLGVHESQIESCFEAFGKIEKCWIDKEKNTGQNNGLAYVRFIRQHSVVNCL 413
Query: 485 ----------------------SASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSK 522
S +K S GI L GR+L V AL +KE ++ K
Sbjct: 414 RKANELSEEWEDPILQKKLRNSSLAKEVSAGGIRLDGRRLIVCHALKVNSQENKENEQRK 473
Query: 523 NETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQ-SPNFHVSRTRLV 581
+ + RNL+L KEG I + A+ S+ ++ KR L+E K K++ +PN VS TRL
Sbjct: 474 KDA-ETRNLHLLKEGFIDPKSKLAKMYSETELQKRLALYEWKKQKVERNPNIIVSSTRLC 532
Query: 582 IYNLPKSMTEKGLKKLCIDAVVSR--------ASKQKPVIKQIKFLQSLKKGKVDTKHYS 633
I+ LP+SMTEK L+KL I V S QK ++K L+ K+ D S
Sbjct: 533 IHQLPRSMTEKELRKL-IQIVAKEEMANMNMSLSSQKKIVKNAFILRDSKRKLKDGSFRS 591
Query: 634 RGVAFVEFTEHQHALVALRVLNNNPSKLFYHH 665
FV+F + A L+ LN + L H
Sbjct: 592 TCRGFVQFLDPLVAEKCLQRLNRDSDILETFH 623
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 127/294 (43%), Gaps = 49/294 (16%)
Query: 11 RGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVTQEVQAEDIEK 70
RG+G+V+F EDA + +E G++I V +A+ RR+K + Q E+
Sbjct: 66 RGYGFVKFQRAEDAAKVLECGQRLVFCGQRILVDYAL-------RRTKTDKSDQQEEDTP 118
Query: 71 TMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQRVA-RTVIIGGL 129
+ K SSKLL GK T L D + Q +A RT++I +
Sbjct: 119 WVAPK----------SSKLLGLGK-------GTSAKQLLDSKVSRNSQDIAKRTILIKPV 161
Query: 130 LNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVLYTTVKSACASV 189
L ++ L YPL + L G +++T ++A +
Sbjct: 162 LQVPWLQQFKEL----------LYPL------KGFLICIGPIRGILHCIFSTREAAKEHI 205
Query: 190 ALLHQKEIKGGTVWARQLG---GEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNV 246
+ L Q K W L T++ +++RN+PF E+ + FS G V V
Sbjct: 206 SYLQQSCKK----WQSNLDVTFAHVPITKRCTVVVRNLPFATSEEELMNTFSKSGPVKLV 261
Query: 247 YIPHNTD-TGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIY 299
+P N + G+ FV++ +DAESAI+ NG + R IAVD+A+ K+ Y
Sbjct: 262 RLPKNIKYPNVCLGYGFVEYFLPKDAESAIRNLNGIELNGRMIAVDYALSKDKY 315
>gi|255949670|ref|XP_002565602.1| Pc22g16890 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592619|emb|CAP98977.1| Pc22g16890 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 724
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 135/297 (45%), Gaps = 68/297 (22%)
Query: 427 TIFICNLPFDLDNEEVKQRF-SAFGEVVSFVPVLHQVTKRPKGTGFLKF-KTVEAATAAV 484
TIFI NLPF ++ + F + FG + VL T+RP+GTGF+ F K +A T
Sbjct: 305 TIFIRNLPFTATDQVLYDHFKTHFGPLRYARVVLDYETERPRGTGFVCFWKPDDANTCIR 364
Query: 485 SASKTTSGLG---------------------------IFLKGRQLTVLKALDKKLAHDKE 517
A + + L+GR L V +A+ K A E
Sbjct: 365 EAPRGAEAMAPNKDKPKSNTAMKHSVLQDENSDPSGRYTLEGRVLQVARAVSKGQAAKLE 424
Query: 518 ---IDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL-QSPNF 573
+ + D R LYL EG I +P + +S ++ R+ ++++ T + ++P
Sbjct: 425 EEGVSRRMVRDTDKRRLYLLSEGTIPSNSPLYKKLSPSEVKMREDSYKQRETFIKKNPAL 484
Query: 574 HVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS-----RASKQKPVIKQ--------IKFLQ 620
H+S TRL I NLP+ + K LK+L ++VV+ +A ++P+ K+ +K L+
Sbjct: 485 HLSLTRLAIRNLPRHINSKDLKQLARESVVNFAKDVKAGTRQPLSKEEQQRSRDTMKELE 544
Query: 621 SLKKGK-----------VDTKHYSR-----------GVAFVEFTEHQHALVALRVLN 655
L+K K +T+ ++ G F+EF H+HAL++LR LN
Sbjct: 545 QLRKQKKMGIVRQAKVVFETREGTKVSEKSGGGRSRGYGFIEFFTHRHALMSLRWLN 601
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 208 GGEGSKTQ-KWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFT 266
E S Q K L +R++P A + + FS ++ + + + +T SKGF FV F
Sbjct: 26 AAEASAAQNKRTLFVRSLPTSATTESLAEYFSQSYIIKHAVVVCDKETKASKGFGFVTFA 85
Query: 267 CKRDAESAIQKFNGQKFGKRPIAVDWA 293
DAESA+++ NG KF + I VD+A
Sbjct: 86 DVEDAESALKELNGSKFDGKVIRVDYA 112
>gi|295665859|ref|XP_002793480.1| nucleolar protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226277774|gb|EEH33340.1| nucleolar protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 691
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 132/302 (43%), Gaps = 68/302 (22%)
Query: 421 EDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKF------ 474
+D +TIFI NLPF +E + + F FG + V T RP+GT F+ F
Sbjct: 268 DDRNASTIFIRNLPFTATDESLYEHFVQFGPLRYARVVFDPETDRPRGTAFVCFWDKENA 327
Query: 475 ----------------KTVEAATAAVSAS------KTTSGLGIFLKGRQLTVLKALDKKL 512
+ +A T+A+ S K SG + GR L + A+ K
Sbjct: 328 NSCLRDAPKRTDLPRAEDAKAKTSAIKYSVLEDEKKDPSG-KYTMDGRVLQLSPAVSKSQ 386
Query: 513 AHDKEID-KSKNETN--DHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQ 569
A E + S+ ET D R L+L EG I + ++ +++ R+ +++ ++
Sbjct: 387 AVKLEAEGSSRRETRDKDKRRLFLLSEGTIPSNCALYKQLTSSEIAMREASAKQRQKLIK 446
Query: 570 S-PNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVS------------------------ 604
S P H+S TRL + NLP+++ K LK L +AVV
Sbjct: 447 SNPVLHLSLTRLSVRNLPRNIDSKALKALAREAVVGFAKDVKSGLREPLSREELHRSNED 506
Query: 605 -------RASKQKPVIKQIKFLQSLKKG-KVDTKH---YSRGVAFVEFTEHQHALVALRV 653
R SK K +I+Q K + K+G K++ K SRG F+E+ H+ AL+ LR
Sbjct: 507 MKEAEKLRKSKGKGIIRQAKVVFEGKEGSKINEKSGAGRSRGYGFIEYYSHRSALMGLRW 566
Query: 654 LN 655
LN
Sbjct: 567 LN 568
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 9/126 (7%)
Query: 215 QKWKLIIRNIPFK-AKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAES 273
Q KLIIRN+P+ A+ +++ +F G V + IP + GF FV +++AE
Sbjct: 156 QPPKLIIRNLPWSIAEPEQLEALFRSFGKVKHAVIPKKGNK--HSGFGFVVLRGRKNAEK 213
Query: 274 AIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETAS 333
A++ NG++ R +AVDWA KNI+ +QN DG D G++ + +
Sbjct: 214 ALEAVNGKEVDGRTLAVDWAAEKNIWDE------LQNHTDGVKDDGTEKEDNNKVHAEVE 267
Query: 334 DDSNSS 339
DD N+S
Sbjct: 268 DDRNAS 273
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +R++P A + D FS + + + + T SKG+ FV F D A+++F
Sbjct: 50 LFVRSLPLSATTESLTDYFSQSYPLKHATVVLDPQTKQSKGYGFVTFADCEDVARALEEF 109
Query: 279 NGQKFGKRPIAVDWAVPKN 297
NG F + + ++ A P++
Sbjct: 110 NGSAFDGKKLKIEVAEPRH 128
>gi|207340498|gb|EDZ68830.1| YPL043Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 474
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 98/184 (53%), Gaps = 22/184 (11%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTV----EAATA 482
++F+ N+P+D E + FS FG V +PV+ + T KGT F+ FK E
Sbjct: 291 SVFVRNVPYDATEESLAAHFSKFGSVKYALPVIDKSTGLAKGTAFVAFKDQYTYNECIKN 350
Query: 483 AVSASKTTSGLG------IFLKGRQLTVLKAL---------DKKLAHDKE-IDKSKNETN 526
A +A T+ +G +GR L++ L +K A KE + K+ E
Sbjct: 351 APAAGSTSLLIGDDVMPEYVYEGRVLSITPTLVREDAGRMAEKNAAKRKEALGKAPGE-K 409
Query: 527 DHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKL-QSPNFHVSRTRLVIYNL 585
D RNLYL EG ++EG+ A+ +++ DM R+ ++ ++ +L ++P+ H+S TRL I NL
Sbjct: 410 DRRNLYLLNEGRVVEGSKMADLLTNTDMEIREKSYKLRVEQLKKNPSLHLSMTRLAIRNL 469
Query: 586 PKSM 589
P++M
Sbjct: 470 PRAM 473
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 216 KWKLIIRNIPFKAK-VNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESA 274
K KLIIRN+P+ + ++K +F G V IP D L GFAFV + A
Sbjct: 146 KPKLIIRNMPWSCRDPVKLKKIFGRYGTVVEATIPRKRDGKLC-GFAFVTMKKISNCRIA 204
Query: 275 IQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGS 320
++ K R +AVD+AV KN + A N D +++SG+
Sbjct: 205 LENTKDLKIDGRKVAVDFAVQKNRWEDYKKAQPEMNDKD-DNESGN 249
>gi|331248326|ref|XP_003336787.1| hypothetical protein PGTG_18355 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309315777|gb|EFP92368.1| hypothetical protein PGTG_18355 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1066
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 130/517 (25%), Positives = 216/517 (41%), Gaps = 92/517 (17%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSK----GFAFVKFTCKRDAES 273
+LIIRN+ F +++ +F+P G + ++ IP G K GFAFV + DA
Sbjct: 317 RLIIRNLQFDITEQDLRFLFAPFGPLHSIDIPTTVVEGKPKPRGRGFAFVWMLNEADAGR 376
Query: 274 AIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGS----DDDLGD--- 326
AI+ NG+K IA+D A+ K + +A + KG+ + + G D L
Sbjct: 377 AIEGLNGKKVYT-GIALD-AIQKETDNEKKSAKRKREKGNDSVERGRVIAVDWVLSKQKY 434
Query: 327 DDAETASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKE 386
++AE A D+ S ++E + + DE+ + + D+SAL +
Sbjct: 435 EEAEGAGDEKTSDDQESNDDDDEEDEDEEDEEDDDEDDDESGSENEDGDDESAL---DGS 491
Query: 387 QDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRF 446
DSD + S + D + K K K + T T+F+ NL F+ +E+ F
Sbjct: 492 YDSDAQIGSSEEEEDAT---DGKFKAKKEQGT--------TLFVRNLSFEATEQELHTLF 540
Query: 447 SAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASK------------TTSGLG 494
FG + V+ R +GTGF+ E A + ++ +GL
Sbjct: 541 RPFGPLRYARIVMDPKLGRSRGTGFVCLWNKEDAEKVLDLTRKLESEGFGHGPPAANGLP 600
Query: 495 IFLK--------------GRQLTVLKALDKKLAHDKEIDKSKN-ETNDHRNLYLAKEGLI 539
L+ GR L + +A+ + A ID+ K+ D R LYL +EG+I
Sbjct: 601 SLLQPDPSSSLASRLSLHGRVLGISEAVSRDQAEKLRIDRDKSGACKDKRRLYLMREGVI 660
Query: 540 LEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSP-NFHVSRTRLVIYNLPKSMTEKGLKKLC 598
+ A+ + D++ RQ +++ L+S + ++S TRL I LP ++E+ LK+L
Sbjct: 661 FPNSDEAKNLHPADLAARQQSFDQRKALLRSNLSLYISFTRLSIRQLPLYVSERCLKRLA 720
Query: 599 IDAVVS-----RASKQKPVIK-------------------------------QIKFLQSL 622
A+ +A K+ + + Q+K L++
Sbjct: 721 RHALDQWRKEVKAGKRAELTQEELEREITLEQKIPEKKSESKKKKEIKSKVKQVKILRTT 780
Query: 623 KKGKVDTK-HYSRGVAFVEFTEHQHALVALRVLNNNP 658
+K T S+G F+E H AL LR N NP
Sbjct: 781 EKTDGTTGLGKSKGYGFLEMESHADALRVLRWANANP 817
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 213 KTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAE 272
K Q L +RN+ F+A E+ +F P G + I + G S+G FV K DAE
Sbjct: 516 KEQGTTLFVRNLSFEATEQELHTLFRPFGPLRYARIVMDPKLGRSRGTGFVCLWNKEDAE 575
Query: 273 SAI---QKFNGQKFGKRPIAVD 291
+ +K + FG P A +
Sbjct: 576 KVLDLTRKLESEGFGHGPPAAN 597
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 238 SPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ----KFNGQKFGKRPIAVDWA 293
S +G V + ++ + S+GF +V+F + DAE+A++ +F GQ +P V WA
Sbjct: 68 SSIGPVRDAFVVSDPVKAKSRGFGYVRFVLREDAETALKDGLGEFEGQ---AKPPLVTWA 124
Query: 294 VPK 296
PK
Sbjct: 125 KPK 127
>gi|170595784|ref|XP_001902518.1| RNA-binding protein [Brugia malayi]
gi|158589766|gb|EDP28633.1| RNA-binding protein, putative [Brugia malayi]
Length = 281
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 4/132 (3%)
Query: 527 DHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLP 586
D RNL+L + G I G+ AA G+S+ D KR + KL++ + VS TRLV++NLP
Sbjct: 18 DKRNLFLLRAGFIRPGSTAAAGMSEADAEKRARMAVVARKKLKNLHMFVSPTRLVVHNLP 77
Query: 587 KSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQH 646
K +T+K + +C A + +K I + + + K + SRG FV F H+
Sbjct: 78 KPLTDKAFRSMCFIAAGNPDAK----ITECRIWRDRNKLGTSGEAVSRGFGFVNFLNHED 133
Query: 647 ALVALRVLNNNP 658
AL A++ LNNNP
Sbjct: 134 ALSAMKHLNNNP 145
>gi|67624335|ref|XP_668450.1| 2810480G15Rik protein [Cryptosporidium hominis TU502]
gi|54659657|gb|EAL38224.1| 2810480G15Rik protein [Cryptosporidium hominis]
Length = 383
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 132/305 (43%), Gaps = 72/305 (23%)
Query: 427 TIFICNLPFDLDNEEVKQRFSA-FGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
TIF+ N+PF++ +K+ FGE + V ++T+ PKG F+KFK +E+ +
Sbjct: 18 TIFLRNVPFEMSEFSLKELIEGKFGETLYVKIVFSKLTQLPKGVAFVKFKNIESVEKVLE 77
Query: 486 ASKTT------------------SG----------LGIFLKGRQLTVLKALDKKLAHDKE 517
K SG +GI GR++ AL++
Sbjct: 78 GEKVADRFYNDYIFRYKRKPISDSGNFSAIILPPEIGIQFNGRRIFARLALNR--TEIAN 135
Query: 518 IDKSK-NETNDH--RNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFH 574
I+ SK +E++D +NL L K+GLIL G AEG+S+ D+ R+ ++ K+ +PN+
Sbjct: 136 IENSKLSESSDKFSKNLDLLKKGLILPGMKEAEGISNHDLRLRENSWKEMKIKMNNPNYE 195
Query: 575 VSRTRLVIYNLPKSMTEKGLKKLCID---------------AVVSRASK------QKPVI 613
V++ RL I N+P + L + I +VS K +K ++
Sbjct: 196 VNKYRLCIRNIPTKIKSSELNDILIREISKMRDIEVQNLGHEIVSEFEKSENSNFKKILM 255
Query: 614 KQIKFLQSLKKGKVDTKHY----------------SRGVAFVEFTEHQHALVALRVLNNN 657
+ + S KK K+ K SRG AFV + + L LNNN
Sbjct: 256 ALRRNINSPKKCKLIFKRLINKVNIVRETSSKSSKSRGFAFVNTSSFSLSKSILETLNNN 315
Query: 658 PSKLF 662
P K+F
Sbjct: 316 P-KIF 319
>gi|430813673|emb|CCJ28986.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 1089
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 187/440 (42%), Gaps = 103/440 (23%)
Query: 210 EGSKTQKWK-------LIIRNIPF--KAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGF 260
E +KT+K K LIIRN+P+ + K + F G V NV IP +S GF
Sbjct: 699 EEAKTEKVKKKQLRPFLIIRNLPWSVRKKDHAFFLEFGKYGKVVNVIIPRKKGGKMS-GF 757
Query: 261 AFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGS 320
AFV AE AI+ NG + R +AVDWA+ ++ + ++ + S
Sbjct: 758 AFVHMKQMSAAEEAIKCINGVELEGRHVAVDWALSQSEW---------KDFLEKEEKSAK 808
Query: 321 DDDLGDDDAETASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSAL 380
D D +DDS SS F E DI +S+++ L
Sbjct: 809 DID---------TDDSVSS----------FMETKDI-----------------ISNNTEL 832
Query: 381 VKGNKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNE 440
V NK S+K S + + P +L D + T+F+ NL F +
Sbjct: 833 V--NKSDSSEKG----------SVIKEDQKPPTALY-----DSNERTLFVKNLSFQTTDN 875
Query: 441 EVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFK---TVE---------AATAAVSASK 488
E+ F FG + V+ T R KGT F+ F +E +A+S +K
Sbjct: 876 ELFSHFCQFGRLKYARVVMDAFTGRSKGTAFVCFHHKMDMENCLNVYRDLTQQSALSVNK 935
Query: 489 TTSGLG----------IFLKGRQLTVLKALDKK---LAHDKEIDKSKN--ETN-DHRNLY 532
++ L L G ++V AL+K+ + D + K+ E N D RN++
Sbjct: 936 KSTVLQNQILDDNIEKFTLDGHLVSVFPALNKEDISVIEDNNRKERKHIVEKNLDKRNIF 995
Query: 533 LAKEGLILEGTPAAEGV--SDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMT 590
L EG I + + ++ DM + + KK+ + ++P+ ++S TRL + N+PK ++
Sbjct: 996 LLNEGYIDPKSSLFNLLNETERDMRNQSLTQRKKLLE-KNPSLYISLTRLAVRNIPKDIS 1054
Query: 591 EKGLKKLCIDAVVSRASKQK 610
+K LK L A V A + K
Sbjct: 1055 DKDLKALARKACVDFAKEVK 1074
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 37/79 (46%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ +R IP + F +G V + I + +T SKG+ FV F+ DAE AI +
Sbjct: 613 IFVRRIPLDVSLPSFTSFFEEIGRVKHAMIVTDPETKKSKGYGFVSFSTHSDAEKAICEL 672
Query: 279 NGQKFGKRPIAVDWAVPKN 297
+ + ++A P++
Sbjct: 673 KKRTLSGHFLKAEFAKPRH 691
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 45/105 (42%), Gaps = 1/105 (0%)
Query: 419 EGEDELQNT-IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTV 477
+G + + NT IF+ +P D+ F G V + V TK+ KG GF+ F T
Sbjct: 603 DGNENVHNTSIFVRRIPLDVSLPSFTSFFEEIGRVKHAMIVTDPETKKSKGYGFVSFSTH 662
Query: 478 EAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSK 522
A A+ K + G FLK DKK + + +K K
Sbjct: 663 SDAEKAICELKKRTLSGHFLKAEFAKPRHRSDKKTLEEAKTEKVK 707
>gi|66357780|ref|XP_626068.1| nucleolar protein NOP4; rrm domain containing protein
[Cryptosporidium parvum Iowa II]
gi|46227298|gb|EAK88248.1| nucleolar protein NOP4; rrm domain containing protein
[Cryptosporidium parvum Iowa II]
Length = 390
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 34/208 (16%)
Query: 427 TIFICNLPFDLDNEEVKQRFSA-FGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
TIF+ N+PF++ +K+ FGE + V ++T+ PKG F+KFK +E+ +
Sbjct: 25 TIFLRNIPFEMSEFSLKELIEGKFGETLYVKIVFSKLTQLPKGVAFVKFKNIESVEKVLE 84
Query: 486 ASKTT------------------SG----------LGIFLKGRQLTVLKALDKKLAHDKE 517
K SG +GI GR++ AL++
Sbjct: 85 GEKVADRFYNDHIFRHKRKPISDSGNFSAIILPPEIGIQFNGRRIFARLALNR--TEIAN 142
Query: 518 IDKSK-NETNDH--RNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFH 574
I+ SK +E++D +NL L K+GLIL G AEG+S D+ R+ ++ K+ +PN+
Sbjct: 143 IESSKLSESSDKLSKNLDLLKKGLILPGMKEAEGISSHDLRLRENSWKEMKIKMSNPNYE 202
Query: 575 VSRTRLVIYNLPKSMTEKGLKKLCIDAV 602
V++ RL I N+P + L + I +
Sbjct: 203 VNKYRLCIRNIPTKIKSSELNDILIREI 230
>gi|452987674|gb|EME87429.1| hypothetical protein MYCFIDRAFT_201120 [Pseudocercospora fijiensis
CIRAD86]
Length = 739
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 131/298 (43%), Gaps = 67/298 (22%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV-- 484
T+FI NLPF +E+++ F FG V+ T+R KGTGF+ F E A A +
Sbjct: 300 TLFIRNLPFTCTDEDLEDHFQQFGSTRYARVVMDYGTERSKGTGFVCFYNKEDADACLRN 359
Query: 485 -----SASKTTSGLGI---------------------FLKGRQLTVLKALDKKLAH---D 515
+AS G + L GR L V +A+DK A+ +
Sbjct: 360 APIRPAASLPEKGKDVKPVQAPHSILQNDMADPTGQYTLDGRVLQVTRAVDKSEANRLTE 419
Query: 516 KEIDKSKNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQS-PNFH 574
+ ++ ND R LYL EG I + E + + + R+ +++ ++S P+
Sbjct: 420 EGVNHRYKRDNDKRRLYLLSEGTISSKSKLWEQLPPSERAMREASAKQRKQLIESNPSLS 479
Query: 575 VSRTRLVIYNLPKSMTEKGLKKLCIDAVV-----------SRASKQ-------------- 609
+S TRL + N+P+S+ K LK L AVV SR SK+
Sbjct: 480 LSLTRLSVRNIPRSVDSKQLKDLARAAVVGFATEVKDGQRSRISKEELARGGDEMQAAEK 539
Query: 610 ------KPVIKQIKFL-QSLKKGKVDTKH---YSRGVAFVEFTEHQHALVALRVLNNN 657
K ++KQ K + +S KV + SRG F+E+ H++AL+ LR LN +
Sbjct: 540 ARREAGKGIVKQAKVVFESAGGSKVSEESGAGRSRGYGFIEYHTHRNALMGLRWLNGH 597
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Query: 193 HQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNE-IKDMFSPVGLVWNVYIPHN 251
H+ G +V ++ E +Q KLI+RN+P+ K +E + +F G V Y+P
Sbjct: 112 HRNGENGESVPQKKKEQERQPSQPSKLIVRNLPWSIKGSEQLTRLFQSYGKVKQAYVPKK 171
Query: 252 TDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSS 301
GL GF FV +++AE AI+ NG++ R +AVDW+V K++Y S
Sbjct: 172 G-PGLMAGFGFVVMRGRKNAEKAIEGVNGKEVDGRTLAVDWSVEKDVYES 220
>gi|345561947|gb|EGX45019.1| hypothetical protein AOL_s00173g120 [Arthrobotrys oligospora ATCC
24927]
Length = 732
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 125/288 (43%), Gaps = 65/288 (22%)
Query: 428 IFICNLPFDLDNEEVKQRFSA-FGEVVSFVPVLHQVTKRPKGTGFLKF------------ 474
+FI N+PF D++ + + F FG + VL T RP+GT F+ F
Sbjct: 313 VFIRNIPFTTDDDGLFEHFKENFGPIRYARVVLEHDTGRPRGTAFVSFYNESDFEECVAN 372
Query: 475 ---KTVE--------AATAAVSASKTTSGLGIF-LKGRQLTVLKALDKKLAHD-KEIDKS 521
TV+ A A+V S++ G + L GR L+V KA+ K+ A I
Sbjct: 373 APKNTVQNIPSSGKGGAKASVLQSESLDPTGKYTLDGRVLSVSKAVSKEEAGRLTTIGTE 432
Query: 522 KNET--NDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQ-SPNFHVSRT 578
K E + R LYL EG I + P +S D+ R+ ++++ L+ + H+S
Sbjct: 433 KREKVKAERRRLYLLNEGQISQNNPLYAKLSQADIKMREESYKQRKGFLEKNTTLHLSLV 492
Query: 579 RLVIYNLPKSMTEKGLKKLCIDAVV-------------------------------SRAS 607
RL + N+P+++ EK LK + A+V R +
Sbjct: 493 RLSVRNIPRNIDEKDLKMMARKALVEFAKEAKEGKREGISKEEARRGGQEAKEEEAQRRA 552
Query: 608 KQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLN 655
K K V+KQ K ++ K G S G F+E+ H+ AL+ LR LN
Sbjct: 553 KGKGVVKQAKIVRE-KSG----AGRSMGYGFIEYIGHRWALMGLRWLN 595
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 218 KLIIRNIPFKAKVNE-IKDMFSPVGLVWNVYIPHNTDT--GLSKGFAFVKFTCKRDAESA 274
+LI+RN+P+ K E + F+ G V V IP + G GFAFV + A A
Sbjct: 150 RLIVRNLPWSVKKPEQLTPYFTKFGKVKEVIIPRKDGSKFGPMAGFAFVTLRKEESARKA 209
Query: 275 IQKFNGQKFGKRPIAVDWAVPKNIY 299
I+ NG + R +AVDWAV KN +
Sbjct: 210 IEAINGTEIEGRTVAVDWAVEKNEW 234
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ +R++ + + + FS + + + + + T S+GF FV FT DA A+Q+F
Sbjct: 41 VFVRSLNYSTTTDSLSAHFSFIAPLKHATVVIDPATKASRGFGFVTFTDPADAVKAVQEF 100
Query: 279 NGQKFGKRPIAVDWA 293
NG+ F R I V+ A
Sbjct: 101 NGKVFEGRHIKVEIA 115
>gi|403222576|dbj|BAM40708.1| uncharacterized protein TOT_020001105 [Theileria orientalis strain
Shintoku]
Length = 764
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 137/288 (47%), Gaps = 49/288 (17%)
Query: 422 DELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFK------ 475
++L++TIF+ NL + E+ + FS FGEV S VL++ K+ KGT F++FK
Sbjct: 446 EDLEDTIFVRNLDYGCTEAELSEYFSKFGEVESSKIVLNE-DKKSKGTAFVRFKRKEDVK 504
Query: 476 -TVEAATAAV------SASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNE---- 524
+E+ A+ S+ K T G+G L+GR+L V AL K A K + + ++E
Sbjct: 505 KILESEKLALLRDEQLSSEKPTLGIGFTLRGRRLKVDGALAKGRA--KALKQHRDEEELR 562
Query: 525 -TNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIY 583
N+ +N++L G+ E +P ++ + + E+K+ K++ N +V+ RL I
Sbjct: 563 KYNEGKNMHLLMVGVPSEESPEYAKMTPEQREGLKEYLERKLEKIRQKNTYVNPKRLCIK 622
Query: 584 NLPKSMTEKGLKKLCIDAVVS----------RASKQKPVIKQIKFLQSLKKGKVDTK--- 630
NLP ++ L+++ ++ + + R K + V+ ++K KG TK
Sbjct: 623 NLPGNINSNDLREVILNHLKNVLDSTEYQKIRKMKNRGVV-EVKLF----KGDTYTKDDQ 677
Query: 631 ----HYSRGVAFVEFTEHQHALVALRVLNNNPSKLFYHHCFDAADAQC 674
+ AFVE +H A ++ +NN + + QC
Sbjct: 678 GTKVKKKKPYAFVELVDHNIATKTQQLFSNNST------LYQPKTLQC 719
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 9/122 (7%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
++ +RN+PF +I + F V+ P +KGFAFV F+ A I +
Sbjct: 331 RVFVRNLPFGTPEEDILEYFRRYDKKVKVHRPSK-----AKGFAFVSFSSLERARKVINE 385
Query: 278 FNGQKFGKRPIAVDWAVPKNIY---SSGGAAAGVQNKGDGNS-DSGSDDDLGDDDAETAS 333
NG+ F KR I + ++PK +Y G + GD D GS D+ DD +
Sbjct: 386 LNGRMFNKRKIQLSMSLPKQLYDPKKEGSKEDPAEGMGDEKMIDDGSTDEKMIDDGMASK 445
Query: 334 DD 335
+D
Sbjct: 446 ED 447
>gi|432863511|ref|XP_004070103.1| PREDICTED: RNA-binding protein 28-like [Oryzias latipes]
Length = 687
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 70/129 (54%), Gaps = 6/129 (4%)
Query: 204 ARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFV 263
A+++ G + K +LIIRN+ FK +++K++F G V IP D G +GFAFV
Sbjct: 100 AKKVPGIKKQQLKSRLIIRNLSFKCSEDDLKEVFEKYGTVLEAKIPLKPD-GKMRGFAFV 158
Query: 264 KFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDD 323
F A A++ N ++ RP+AVDWAVPK+ Y+ A Q+ GN ++ D
Sbjct: 159 LFKNVCGAAKALKAMNLKEIKGRPVAVDWAVPKDKYT-----ASTQSSHPGNKNTKQASD 213
Query: 324 LGDDDAETA 332
D+D E +
Sbjct: 214 TCDEDEEQS 222
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Query: 560 LHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQIKFL 619
E K KL+ + VS+TRL I+NLPKS+ K LK LC+ AV + I + + +
Sbjct: 394 FEEMKRAKLRDISVFVSKTRLCIHNLPKSVDNKKLKALCLQAVKGVKGVR---ITECRVM 450
Query: 620 QSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPSKLFYHH 665
K + S G FV+F EH+ AL LR LNNNP +F H
Sbjct: 451 YDKKPERGQVLGQSLGYGFVQFQEHEQALSTLRYLNNNPD-IFSAH 495
>gi|84994122|ref|XP_951783.1| RNA binding protein (nil per os homologue) [Theileria annulata
strain Ankara]
gi|65301944|emb|CAI74051.1| RNA binding protein (nil per os homologue), putative [Theileria
annulata]
Length = 773
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 130/272 (47%), Gaps = 37/272 (13%)
Query: 421 EDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAA 480
+DE++NTIF+ NL ++ +E+ + FS F EV S L++ K KGT F+KFK +
Sbjct: 450 KDEIRNTIFVRNLDYECTEKELFEYFSKFAEVESCNICLNE-DKSSKGTAFVKFKNRDQL 508
Query: 481 TAAVSASKTTS-------------GLGIFLKGRQLTVLKALDK---KLAHDKEIDKSKNE 524
V K ++ GLG L+GR+L + AL K K+ +K+ ++ N
Sbjct: 509 KQLVENEKLSNMRDKELNNKKPVLGLGYTLRGRRLKLDLALPKEEAKILKEKKAEEDSNR 568
Query: 525 TNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHV------SRT 578
+ +NL+L G+I E +P +SDD + KM K++ N V S
Sbjct: 569 LKEQKNLHLLMVGVIKEDSPQFSQLSDDQKETIKQTVASKMEKIKLKNTFVNPKMVNSVI 628
Query: 579 RLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPV-IKQIK----FLQSLKKGKVDTKHYS 633
+ I NLP ++ L+ + + + + S+ + + +K++K +L KG TK
Sbjct: 629 GICIKNLPSNVKSNDLRAVIYNHLKTSLSESEYLNLKKLKNRGIVELTLLKGDSYTKD-D 687
Query: 634 RGV--------AFVEFTEHQHALVALRVLNNN 657
+GV AFV+ +H A+ L +NN
Sbjct: 688 QGVKVKKKKPFAFVQLVDHNIAMKTLEFFSNN 719
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 204 ARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFV 263
A +L G+ ++ ++ +RNIPFK E+ F V+IP SKG+AFV
Sbjct: 318 AMELFGKATRNSS-RVFVRNIPFKTTYEELASFFKEYDKGAKVHIPSK-----SKGYAFV 371
Query: 264 KFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSS 301
F+ ++ I + NG+ F KR I + ++PK +Y S
Sbjct: 372 NFSSLEKSKKLINELNGKMFKKRKIQLSLSLPKQLYLS 409
>gi|71003994|ref|XP_756663.1| hypothetical protein UM00516.1 [Ustilago maydis 521]
gi|46095735|gb|EAK80968.1| hypothetical protein UM00516.1 [Ustilago maydis 521]
Length = 1077
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 130/298 (43%), Gaps = 60/298 (20%)
Query: 356 IARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTVNESAKVSDVSKLNSSK------ 409
A+ L+++ + +++ D AL K + E +D+ ES +D+ N++
Sbjct: 534 FAKAALDRVRANAQPERAVAVDWALSKKDYEAKADEP--ESEDDADIKNDNAASEDNDDG 591
Query: 410 ------SKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVT 463
S+P+ EG T+F+ NLP+ EE++ F +FG + + + T
Sbjct: 592 DDDKLASRPQLPAPEEG-----TTLFVRNLPYQATEEELRNLFRSFGPLRYAKITMDKTT 646
Query: 464 KRPKGTGFLKFKTVEAATAAVSASKT---------------------------------- 489
R KGTGF+ F +A AA++ +K
Sbjct: 647 NRSKGTGFVCFWQASSADAALAQAKIIERESGVSGSSSAASVANQKNPFAMPSVLTADPA 706
Query: 490 ---TSGLGIFLKGRQLTVLKALDKKLAHDKEID-KSKNETNDHRNLYLAKEGLILEGTPA 545
T+ L L GR L V+ A+ + A E + + E D RN +L +EG+ +
Sbjct: 707 APLTASLN--LHGRVLNVIAAVARDEASRLETSGRKEREKGDKRNTWLLREGVPFPNSDF 764
Query: 546 AEGVSDDDMSKR-QMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAV 602
A ++ ++ KR Q +K +P+ VS+TRL I +LP ++++ LK+L I A+
Sbjct: 765 AAKLAPSEVEKRLQSFQVRKAQMGANPSLFVSKTRLSIRSLPLFVSDRMLKRLAIHAI 822
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 114/295 (38%), Gaps = 86/295 (29%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSV--GGRKIGVKHAMHRASLEQRRSK 58
+VT + + + +G GYV FA+ EDA A+E G S+ G RKI + A + +R
Sbjct: 79 VVTDQATKKSKGVGYVTFAIPEDATTALEQLQGKSLDGGSRKIQITFADQKDPTGTKR-- 136
Query: 59 VTQEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKT--VKPRKAATLGIDLADKEDCSQ 116
+ + A+ S L+ +T KP +A K +
Sbjct: 137 -------------------LTTKADPGSPSALKRPRTESTKPPRA---------KGPVQE 168
Query: 117 KQRVA-RTVIIGGLLN---ADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKM 172
K A RT+I+ GL A ++++++ A IG V +V YP
Sbjct: 169 KDADAVRTIILSGLAGCTPAPDSKQIYKRARKIGDVDNVIYPC----------TSSPNPN 218
Query: 173 DASAVLYTTVKSACASVALLHQKEIKGGTVWA---------------------------R 205
D + V++ T A +V LH KG + A R
Sbjct: 219 DVAHVIFRTPNHAMTAVEKLHAHVFKGVQISAILKKRADNASKIAAHMRPETLAKREKMR 278
Query: 206 Q----LGGEGSKT-------QKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIP 249
Q G+GS + +LIIRN+PF +++ +F P G V+ + IP
Sbjct: 279 QDVEKNSGKGSMPVLLSEIDKSSRLIIRNLPFDVNEADLRSIFLPFGPVYEITIP 333
Score = 45.4 bits (106), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + +P+ A +++ MFS +G + ++ + T SKG +V F DA +A+++
Sbjct: 50 LFVSRLPYTATTTDLQTMFSEIGPLKRAFVVTDQATKKSKGVGYVTFAIPEDATTALEQL 109
Query: 279 NGQKF--GKRPIAVDWA 293
G+ G R I + +A
Sbjct: 110 QGKSLDGGSRKIQITFA 126
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV 484
T+F+ LP+ +++ FS G + V Q TK+ KG G++ F E AT A+
Sbjct: 49 TLFVSRLPYTATTTDLQTMFSEIGPLKRAFVVTDQATKKSKGVGYVTFAIPEDATTAL 106
>gi|428182346|gb|EKX51207.1| hypothetical protein GUITHDRAFT_134710 [Guillardia theta CCMP2712]
Length = 534
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/259 (31%), Positives = 116/259 (44%), Gaps = 44/259 (16%)
Query: 421 EDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAA 480
+ EL+ T+F+ N+P + ++EVK+ F FG++ VL + T + KGT F+++ EAA
Sbjct: 121 QQELKRTVFVRNIPLEASDQEVKETFRRFGKIKLCKLVLDKATGKHKGTAFIQYAEEEAA 180
Query: 481 TAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLIL 540
AV A +G + K V K DK KS E L L L +
Sbjct: 181 AKAVEAGGAFTGSEEWEK-----VQKKKDK--LQSVSFIKSTLEREFQETLSLHGRHLFV 233
Query: 541 EGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCID 600
A V +D+ K+ S + +TRL + NL K MTE LK L
Sbjct: 234 -----AFAVDRNDVE-----------KVSSNKEKIDKTRLSVRNLSKDMTEPQLKALFKT 277
Query: 601 AVVSRA---------------SKQKPVIKQIKFLQS---LKKGKVD---TKHYSRGVAFV 639
AV A + K +++ L + K KVD K S+G FV
Sbjct: 278 AVEVSAVCPPPLSSPPFPCQNASGKDDTSKVQVLSAKLVRNKEKVDPVTNKFQSKGYGFV 337
Query: 640 EFTEHQHALVALRVLNNNP 658
EF+EH+HAL+ALR LNN P
Sbjct: 338 EFSEHEHALLALRKLNNCP 356
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 209 GEGSKTQKWK--LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
EGSK Q+ K + +RNIP +A E+K+ F G + + + TG KG AF+++
Sbjct: 116 AEGSKQQELKRTVFVRNIPLEASDQEVKETFRRFGKIKLCKLVLDKATGKHKGTAFIQY 174
>gi|393906773|gb|EFO27553.2| hypothetical protein LOAG_00933 [Loa loa]
Length = 344
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 49/75 (65%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +R + + A+ ++++ +F +G V +VYIP + T S+GFA+VKF RDAE A++K
Sbjct: 16 LYVRQVHYSARPDDLRALFERMGPVRDVYIPLDYYTRESRGFAYVKFEFTRDAEDALRKL 75
Query: 279 NGQKFGKRPIAVDWA 293
NG RPI V+WA
Sbjct: 76 NGASILGRPIEVEWA 90
>gi|17861892|gb|AAL39423.1| GM13274p [Drosophila melanogaster]
Length = 318
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 68/120 (56%), Gaps = 7/120 (5%)
Query: 540 LEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCI 599
+ G AA+GVS DM+KR L + K L++ N VSR RL I+NLP++ + LK++ +
Sbjct: 1 MAGAKAADGVSASDMAKRHELEQVKTQVLKNLNRFVSRNRLSIHNLPQNYDNEKLKQMAL 60
Query: 600 DAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPS 659
R + + V+++ K +GK S+G F+ F HQ AL ALR LNNNP+
Sbjct: 61 TYTGFRPHECR-VMREHKVTPEHPQGK------SKGFGFLSFDTHQRALAALRKLNNNPN 113
>gi|156101369|ref|XP_001616378.1| RNA-binding protein [Plasmodium vivax Sal-1]
gi|148805252|gb|EDL46651.1| RNA-binding protein, putative [Plasmodium vivax]
Length = 513
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 124/298 (41%), Gaps = 45/298 (15%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL I ++P +K+MFSP G V V+I + TGL KG +FVKF K A AI
Sbjct: 188 KLFIGSLPKSITEESVKEMFSPYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAINS 247
Query: 278 FNGQKFGK---RPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASD 334
NG+K + RP+ V +A PK S + + + A+
Sbjct: 248 LNGKKTLEGCARPVEVRFAEPK-------------------SAKQTQIPMTLQPMQNAAH 288
Query: 335 DSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTVN 394
NS P+N +F + + N G+ EQ ++ T
Sbjct: 289 GMNSQPHVTSPNNINFGQNFGVN----NNYPRQVGAWKEYYSGEGRPYYYNEQ-TNTTQW 343
Query: 395 ESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVS 454
E K + + S+ + +L + G +FI ++P + ++ Q FS FGE++S
Sbjct: 344 EMPKEFETLFMGSTPNM-HNLSDSSGPPGA--NLFIFHVPNEWHQTDLIQAFSPFGELLS 400
Query: 455 FVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKL 512
+ T R +G F+ ++++E+A AA+S Q+ AL+KKL
Sbjct: 401 ARIATEKSTGRNRGFAFVSYESIESAAAAIS---------------QMNGFMALNKKL 443
>gi|71031718|ref|XP_765501.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352457|gb|EAN33218.1| hypothetical protein TP02_0933 [Theileria parva]
Length = 675
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 128/263 (48%), Gaps = 29/263 (11%)
Query: 423 ELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKT------ 476
++++TIF+ NL ++ +E+ + FS F EV S L++ K KGT F+KFK
Sbjct: 360 DIKDTIFVRNLDYECTEKELFEYFSKFAEVDSCNICLNE-DKTSKGTAFVKFKNKDQLKQ 418
Query: 477 -VEAATAAV------SASKTTSGLGIFLKGRQLTVLKALDK---KLAHDKEIDKSKNETN 526
+E +V + K GLG L+GR+L + AL K ++ D++ ++ N+
Sbjct: 419 LIENEKLSVIRDKDLNNKKPVLGLGYTLRGRRLKLDLALPKEEARILKDQKAEEENNKLK 478
Query: 527 DHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLP 586
+ +NL+L G+I E +P +S++ + K+ K++ N V+ R+ I NLP
Sbjct: 479 EQKNLHLLMVGVIKEDSPQFGKLSEEQKESIKQSVASKLEKIKLKNTFVNPKRICIKNLP 538
Query: 587 KSMTEKGLKKLCIDAV-VSRASKQKPVIKQIK----FLQSLKKGKVDTK-------HYSR 634
++ L+ + + + S ++ + +K++K +L KG TK +
Sbjct: 539 PNVKSNDLRTVIYNHLKASLSTNEYLELKKLKNRGIVELTLLKGDSYTKDDQGTKVKKKK 598
Query: 635 GVAFVEFTEHQHALVALRVLNNN 657
AFVE H A+ L+ +NN
Sbjct: 599 PFAFVELVNHNIAMKTLKFFSNN 621
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 34/221 (15%)
Query: 211 GSKTQKW-KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKR 269
G T+K ++ +RNIPFK K E+ F V+IP + SKG+AFV F+
Sbjct: 233 GKSTRKSSRVFVRNIPFKTKYEELMSFFKEYDKGAKVHIPSH-----SKGYAFVNFSSLE 287
Query: 270 DAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQN--------KGDGNSDSGSD 321
++ I + NG+ F R I + ++PK +Y S + N G D+ +
Sbjct: 288 KSKKLINELNGKLFKNRRIQLSLSLPKELYLSKSTSEATDNDTINTAETNGTPQGDTTPE 347
Query: 322 DDLGDDDAETASD----------DSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSL 371
D++G+ D D D +EKE + F EVD LN+ ++ G
Sbjct: 348 DNVGNRDEHQKGDIKDTIFVRNLDYECTEKELFEYFSKF-AEVDSCNICLNEDKTSKG-- 404
Query: 372 PSLSDDSALVKGNKEQDSDKTVNESAKVSDVSKLNSSKSKP 412
+A VK K +D K + E+ K+S + + + KP
Sbjct: 405 ------TAFVKF-KNKDQLKQLIENEKLSVIRDKDLNNKKP 438
>gi|242077714|ref|XP_002448793.1| hypothetical protein SORBIDRAFT_06g033290 [Sorghum bicolor]
gi|241939976|gb|EES13121.1| hypothetical protein SORBIDRAFT_06g033290 [Sorghum bicolor]
Length = 1076
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 152/342 (44%), Gaps = 38/342 (11%)
Query: 177 VLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQK----WKLIIRNIPFKAKVNE 232
V Y+ + A ++ ++ + ++G + R G S + K KL + N+P ++
Sbjct: 275 VQYSDPRYAAEAIKHMNGRMVEGRMLEVRLAGAPSSGSTKEMDMSKLYVCNLPLLLHEDK 334
Query: 233 IKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDW 292
+ D+F P G V +V + + TGLSKG+ FV+++ + A AI + NG + + V
Sbjct: 335 LHDLFVPYGQVTSVKVMRDHATGLSKGYGFVRYSDPQHAAHAIFQLNGHLIEGKKMEVRV 394
Query: 293 AVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDDSNSSEKEDLPSNADFDE 352
A SS G+ VQ + S +D L T D ++ ++LP + D+
Sbjct: 395 AA----VSSSGSNTSVQ------AISETDHQL------TKEVDMSNVYVQNLPLLMNTDK 438
Query: 353 EVDIARKVLNKLTSTTGSL---PSLSDDSALVKGNKEQDSDKTV-------NESAKVSDV 402
+++ K+TS ++ +S VK + D+ V E K+
Sbjct: 439 LLNLFLP-YGKVTSAKVAMDYTSGISKGYGFVKFSDPHDAAHAVIELNGCLVEGRKILVR 497
Query: 403 SKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQV 462
+ SS + + +T E ++ N +++CN+P ++ ++ + F FG + + V+ Q
Sbjct: 498 VRPPSSPVESHANNRTLKEIDMSN-LYVCNIPSSMNKAKLVELFLPFGRITHAM-VVEQS 555
Query: 463 TKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV 504
KG GF+KF A AV+ G ++G ++V
Sbjct: 556 NNSSKGYGFVKFADSHCAAEAVAMMN-----GALIEGETISV 592
Score = 42.4 bits (98), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 39/86 (45%)
Query: 208 GGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTC 267
G E + L + +P +++ ++F P G + + + TG+SKGF FV+F
Sbjct: 805 GNEHRQIDMTNLYVGYLPPYVTTDKLIELFLPCGQITQAKVVVDKFTGVSKGFGFVRFAD 864
Query: 268 KRDAESAIQKFNGQKFGKRPIAVDWA 293
A +AI NG +AV A
Sbjct: 865 AYSAATAITHMNGYPLDGHMLAVRTA 890
>gi|323508056|emb|CBQ67927.1| related to Nucleolar protein NOP4 [Sporisorium reilianum SRZ2]
Length = 1039
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 131/337 (38%), Gaps = 90/337 (26%)
Query: 411 KPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTG 470
+PK EG T+F+ NLP+ EE++ F FG + + + T R KGTG
Sbjct: 562 RPKLPAPEEG-----TTLFVRNLPYQATEEELRNLFRTFGPLRYAKITMDKTTNRSKGTG 616
Query: 471 FLKFKTVEAATAAVSASKT--------------------------------------TSG 492
F+ F +A AA++ +K T+
Sbjct: 617 FVCFWQSSSADAALAQAKIIERESGVSGSSTASSSVANQKNPFAMPSVLTADPAAPLTAS 676
Query: 493 LGIFLKGRQLTVLKALDKKLAHDKEID-KSKNETNDHRNLYLAKEGLILEGTPAAEGVSD 551
L L GR L V+ A+ + A E + + E D RN +L +EG+ + ++
Sbjct: 677 LN--LHGRVLNVIPAVARDEASRLETSGRKEREKGDKRNTWLLREGVPFPNSDLGAKLAP 734
Query: 552 DDMSKR-QMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRAS--- 607
++ KR Q +K +P+ VS+TRL + +LP ++++ LK+L I AV + S
Sbjct: 735 SEVEKRLQSFQVRKAQMGANPSLFVSKTRLSVRSLPLFVSDRMLKRLAIHAVKAFGSEVR 794
Query: 608 ------------------------KQKPVIKQIKFLQSLKKGKVDTKH----------YS 633
K+KP + +QS KV +H S
Sbjct: 795 AGARADLDADEKADRTVSTSVENRKRKPGERPTAVVQS----KVVRQHDRVEALTGLGKS 850
Query: 634 RGVAFVEFTEHQHALVALRVLNNNP--SKLFYHHCFD 668
+G F+E AL +R N N SKLF D
Sbjct: 851 KGYGFLEMKSFHDALKVIRWANANKTVSKLFGEWWTD 887
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 112/292 (38%), Gaps = 80/292 (27%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSV--GGRKIGVKHAMHRASLEQRRSK 58
+VT + + + +G GYV FA+ EDAN A+E G S+ G RKI + A + +R+
Sbjct: 76 VVTDQATKKSKGVGYVTFAIPEDANTALEQLQGKSLDGGSRKIQITFADQKDPTGNKRTA 135
Query: 59 VTQEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQ 118
V + + K +SK S ++ + A +
Sbjct: 136 VKSDPDSPSSSKR----------PRTEASKPARSNAPIQEKDADAV-------------- 171
Query: 119 RVARTVIIGGLLNADMA---EEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDAS 175
RTV++ GL A +++++ A IG V +V YP P D +
Sbjct: 172 ---RTVMLSGLAGCSPAPDSKQIYKRARKIGDVENVIYPTP----------SSSNPNDVA 218
Query: 176 AVLYTTVKSACASVALLHQKEIKGGTVWA---------------------------RQ-- 206
V++ T A +V LH KG + A RQ
Sbjct: 219 HVIFHTPNHAMTAVEKLHAHVFKGVQISAILKKRADNAAKIAAHMRPETLAKREKMRQDV 278
Query: 207 --LGGEGSKT-------QKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIP 249
G+GS + +LIIRN+PF +++ +F P G V+ + IP
Sbjct: 279 EKNSGKGSMPVLLSEIDKSSRLIIRNLPFDVNEADLRSIFLPFGPVYEITIP 330
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L I +P+ A +++ FS +G + ++ + T SKG +V F DA +A+++
Sbjct: 47 LFISRLPYTATSTDLQTTFSEIGPLKRAFVVTDQATKKSKGVGYVTFAIPEDANTALEQL 106
Query: 279 NGQKF--GKRPIAVDWA 293
G+ G R I + +A
Sbjct: 107 QGKSLDGGSRKIQITFA 123
Score = 39.3 bits (90), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 424 LQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAA 483
+ T+FI LP+ + +++ FS G + V Q TK+ KG G++ F E A A
Sbjct: 43 INATLFISRLPYTATSTDLQTTFSEIGPLKRAFVVTDQATKKSKGVGYVTFAIPEDANTA 102
Query: 484 V 484
+
Sbjct: 103 L 103
>gi|320165677|gb|EFW42576.1| RNA binding domain-containing protein 28 [Capsaspora owczarzaki
ATCC 30864]
Length = 838
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 72/131 (54%), Gaps = 8/131 (6%)
Query: 177 VLYTTVKSACASVALLHQKEIKGGTVWA------RQLGGEGSKT--QKWKLIIRNIPFKA 228
V+YT K+A A+VA L+ E KG V A R L G+ S +K +LI+RN+PF
Sbjct: 23 VVYTMHKNAEAAVAALNAHEFKGNHVIAVLKTRERFLDGQLSAKALRKCRLIVRNLPFNV 82
Query: 229 KVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPI 288
+I+ F G + + +P D KGFAFV+FT DA +A+ N Q RP+
Sbjct: 83 TRLDIEKAFRKYGPIKEIALPLKPDGVQLKGFAFVQFTNYIDAANAVAGMNNQPINGRPV 142
Query: 289 AVDWAVPKNIY 299
AVD+AV K+ +
Sbjct: 143 AVDFAVAKDKF 153
>gi|83315537|ref|XP_730836.1| ribonucleoprotein [Plasmodium yoelii yoelii 17XNL]
gi|23490683|gb|EAA22401.1| ribonucleoprotein homolog F21B7.26 - Arabidopsis thaliana, putative
[Plasmodium yoelii yoelii]
Length = 440
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 117/298 (39%), Gaps = 45/298 (15%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL I ++P IKDMFS G V V+I + TGL KG +FVKF K A AI
Sbjct: 115 KLFIGSLPKNITEESIKDMFSVYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAISS 174
Query: 278 FNGQKF---GKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASD 334
NG+K RP+ V +A PK S + +G + A
Sbjct: 175 LNGKKTLEGCNRPVEVRFAEPK-------------------SSKQAQSQVGIQPLQNAPH 215
Query: 335 DSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTVN 394
+ P+N ++ + N G EQ ++ T
Sbjct: 216 GISPQAHPGTPNNINYGNNFGVN----NNYPRQVGVWKEYYSGEGRPYYYNEQ-TNTTQW 270
Query: 395 ESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVS 454
E K + +N++ P ++ +FI ++P + ++ Q FS FGE++S
Sbjct: 271 EMPKEFETLFMNNN---PNIHNLSDSSGPPGANLFIFHVPNEWQQTDLIQAFSPFGELLS 327
Query: 455 FVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKL 512
+ T R +G F+ ++ +E+A AA+S Q+ AL+KKL
Sbjct: 328 ARIATEKNTGRNRGFAFVSYENIESAAAAIS---------------QMNGFMALNKKL 370
>gi|67480479|ref|XP_655589.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56472740|gb|EAL50203.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449705815|gb|EMD45786.1| RNA recognition domain containing protein [Entamoeba histolytica
KU27]
Length = 395
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 117/240 (48%), Gaps = 18/240 (7%)
Query: 421 EDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAA 480
ED++ TIFI NL F+ EE+K++ +GEV + + +GTGF+ F+ A
Sbjct: 70 EDQIYRTIFIQNLSFETSEEELKEKMGEYGEVSYCKICMDKEKGISRGTGFVCFRKRGVA 129
Query: 481 TAAVSASKTTSG---LGIFLKGRQLTVLKALDKKLAHDKEIDKSKNE--TNDHRNLYLAK 535
+ + SG I + GR+L + KA++K+ A D+ K K + D+RN+ LA
Sbjct: 130 EKVIEEAYMFSGSKESDIEIDGRRLILQKAINKEQAQDRSNSKKKKKEGIKDNRNVSLAM 189
Query: 536 EGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLK 595
G + G++ + R ++ KL++ NF V++ R+ + N+PK+ K
Sbjct: 190 VGQKTKEEYLQLGLTPSEAKMRLKAQMERNKKLKNVNFCVNKYRVCVRNIPKNTN----K 245
Query: 596 KLCIDAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLN 655
K+ ++ SK K I IK ++ ++GK + G F+ FT + A + +N
Sbjct: 246 KMIMETFGKYCSKGK--ISDIKIIKG-ERGK------AIGYCFLTFTSAEDAYQFVEKVN 296
>gi|167517425|ref|XP_001743053.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778152|gb|EDQ91767.1| predicted protein [Monosiga brevicollis MX1]
Length = 1117
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 19/163 (11%)
Query: 143 GSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVLYTTVKSACASVALLH--------- 193
G I +V P PKE M V Y + + A ++ +LH
Sbjct: 926 GPIRSVRVARKPNPKE-------PSRPLSMGFGFVEYKSRQDAVRAIKMLHGSSLQEHTL 978
Query: 194 ---QKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPH 250
E G + R+ G+ K + KL++RNI F+A E++ +FSP G + +V +P
Sbjct: 979 ELKMSERTGAPLTKRERQGKKMKAKSNKLVVRNIAFEATPKEVQQLFSPHGNIVSVRLPR 1038
Query: 251 NTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWA 293
G +GFAF++F+ K++A A +G R +A+++A
Sbjct: 1039 KQYDGTHRGFAFIEFSTKQEARDAFSALSGTHLYGRRLAMEFA 1081
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 106/246 (43%), Gaps = 26/246 (10%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+F+ NLP+ +E+++ F AFG + + TK+PKG F+ F E A+ A
Sbjct: 541 LFVRNLPYACREDELRELFEAFGPLSELHMPIDGETKKPKGFAFITFVLPEHASQAFQNL 600
Query: 488 KTTSGLGIFLKGRQLTVLKALDKK-LAHDKEIDKSKNETNDHRNLYLAKEG-------LI 539
T IF +GR L VL A K D E+++ N D K G L
Sbjct: 601 DNT----IF-QGRLLHVLPARHKPGTDADFEVEEGSNYKKDKATKQKQKAGDAYNWSTLF 655
Query: 540 LEGTPAAEGVSDD-DMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLC 598
L AE ++D+ +SK +++ + L + + + ++ N + + E G+K
Sbjct: 656 LRQDAVAEAMADEFGVSKGELMDDSGEASL-AVRMALGESNIIAENK-RFLEEHGVKLSA 713
Query: 599 IDAVVSRASKQKPVIKQIKF------LQSLKKGKVDTKHY----SRGVAFVEFTEHQHAL 648
D + + S ++K + F L+ L + D ++ SR +A VE+ E A
Sbjct: 714 FDTRIGKRSTTTLLVKNLPFAAEEKTLRPLFEAHGDLSNFVMPPSRTMALVEYMEPSEAR 773
Query: 649 VALRVL 654
R L
Sbjct: 774 RGFRKL 779
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+P+ + +E++++F G + +++P + +T KGFAF+ F A A Q
Sbjct: 540 RLFVRNLPYACREDELRELFEAFGPLSELHMPIDGETKKPKGFAFITFVLPEHASQAFQN 599
Query: 278 FNGQKFGKRPIAV 290
+ F R + V
Sbjct: 600 LDNTIFQGRLLHV 612
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L+++N+PF A+ ++ +F G + N +P S+ A V++ +A +K
Sbjct: 726 LLVKNLPFAAEEKTLRPLFEAHGDLSNFVMPP------SRTMALVEYMEPSEARRGFRKL 779
Query: 279 NGQKFGKRPIAVDWAVPKNIY 299
+K+ P+ ++WA PK +
Sbjct: 780 AYRKYKDEPLYLEWA-PKQCF 799
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 10 HRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVTQEVQAED 67
HRGF +++F+ ++A A +GT + GR++ ++ A SLE R K + + D
Sbjct: 1045 HRGFAFIEFSTKQEARDAFSALSGTHLYGRRLAMEFAEDDESLETLRQKTQRSMHQSD 1102
>gi|403341233|gb|EJY69916.1| RNA binding domain-containing protein 28 [Oxytricha trifallax]
Length = 732
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
K+I+RNI F K +K F G + V +P + L++GF F++F+ K +A+ AI
Sbjct: 31 KVIVRNIQFDLKEPHLKKEFQKFGTIVAVNVPIKNENNLNRGFGFIEFSTKEEAQKAIDG 90
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSS 301
NGQK+ R +AV+++ P Y S
Sbjct: 91 MNGQKYKGRVLAVEYSTPSRKYES 114
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 137/309 (44%), Gaps = 72/309 (23%)
Query: 411 KPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQV-------- 462
K + ++Q +G+ T+F+ N+ +D ++ K+ FGE+ VL +V
Sbjct: 181 KNRKIQQEQGK-----TLFVRNIGYDTTEQQFKEFMGNFGELQ--YAVLCKVKELRLNNS 233
Query: 463 -----TKRPKGTGFLKFKTVEAATAAVSASKT----------TSGL-------------G 494
+ KGTGF+++K A V S + TS L G
Sbjct: 234 DGSSQQQTHKGTGFVQYKDNNVAEQLVELSSSIELKLDEECKTSRLNARKNNGKKDDNKG 293
Query: 495 IF--------LKGRQLTVLKALDKKLAHDK--EIDKSKNETNDHRNLYLAKEGLILEGT- 543
+ L GR+L + +A+ + A +K E K D RNL KEGL+ E +
Sbjct: 294 VLSVISGELELNGRRLVIKEAMSRNEAVEKQQEDQDKKKMKEDKRNLNYKKEGLLNEDSW 353
Query: 544 -PAAEGVSDDDMSKRQ-MLHEKKMTKLQSPNFHVSRTRLVIYNLP-KSMTEKGLKKL--- 597
V++ D+ +RQ +L EK+ ++ N VS+ R+ I NLP + EK LK+L
Sbjct: 354 IHKVPRVTEKDIEQRQRLLKEKEAALSKNTNLFVSKIRIQIRNLPRRDFFEKELKELMMV 413
Query: 598 -------CIDAVVSRASKQKPVIKQIKFLQSLKKGKVDTK---HYSRGVAFVEFTEHQHA 647
+D + K+K +KQ+K L+ + K DT + G+ F EF + A
Sbjct: 414 VIDEWLKTVDDKKLKEQKKKKFLKQVKILRD--QQKTDTSSGDKLASGLGFAEFDDEDLA 471
Query: 648 LVALRVLNN 656
L ALR LNN
Sbjct: 472 LFALRYLNN 480
Score = 42.0 bits (97), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 17/118 (14%)
Query: 388 DSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFS 447
DS+ + S+V K+ K P Q EG+ + + N+ FDL +K+ F
Sbjct: 2 DSEPNTKTQVENSEVDKVQKEKPIP----QKEGK------VIVRNIQFDLKEPHLKKEFQ 51
Query: 448 AFGEVVSF-VPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV 504
FG +V+ VP+ ++ +G GF++F T E A A+ G KGR L V
Sbjct: 52 KFGTIVAVNVPIKNE-NNLNRGFGFIEFSTKEEAQKAIDGMN-----GQKYKGRVLAV 103
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 4 KKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
K +N +RGFG+++F+ E+A +A++ NG GR + V+++ E SKVT
Sbjct: 64 KNENNLNRGFGFIEFSTKEEAQKAIDGMNGQKYKGRVLAVEYSTPSRKYE---SKVT 117
>gi|335308866|ref|XP_003361402.1| PREDICTED: RNA-binding protein 28-like, partial [Sus scrofa]
Length = 365
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 66/116 (56%), Gaps = 4/116 (3%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+LIIRN+ FK +++K +F+P G V V IP D G +GFAFV+F +A A++
Sbjct: 168 RLIIRNLSFKCSEDDLKTVFAPFGAVLEVNIPRKPD-GKMRGFAFVQFKNLLEAGKALRS 226
Query: 278 FNGQKFGKRPIAVDWAVPKNIY--SSGGAAAGVQNK-GDGNSDSGSDDDLGDDDAE 330
N ++ R +AVDWAV K+ Y + +A G + + G N + G ++ + D E
Sbjct: 227 MNMKEIKGRTVAVDWAVAKDKYKNTQPASAPGEEKRPGSENQELGQENGREEGDME 282
>gi|403257503|ref|XP_003921356.1| PREDICTED: RNA-binding protein 28 [Saimiri boliviensis boliviensis]
Length = 640
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+LIIRN+ FK +++K +F+ G V V IP D G +GFAFV+F +A A++
Sbjct: 115 RLIIRNLSFKCSEDDLKTIFAQFGAVLEVNIPRKPD-GKMRGFAFVQFKNLLEAGKALKG 173
Query: 278 FNGQKFGKRPIAVDWAVPKNIY 299
N ++ R +AVDWAV K+IY
Sbjct: 174 MNMKEIKGRTVAVDWAVAKDIY 195
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%)
Query: 617 KFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
+ ++ LK + K S G AF EF EH+HAL ALR +NNNP
Sbjct: 405 RVMRDLKGALGNMKGQSLGYAFAEFQEHEHALKALRHINNNP 446
Score = 42.0 bits (97), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV 43
+VT+KGS RGFGYV F+++ED RA +K T+ G KI V
Sbjct: 35 VVTEKGSKTCRGFGYVTFSMLEDVQRA--LKEITTFEGCKINV 75
>gi|354470655|ref|XP_003497560.1| PREDICTED: RNA-binding protein 28 isoform 1 [Cricetulus griseus]
Length = 707
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+LIIRN+ FK +++K F+P G V V IP D G +GFAFV+F +A A++
Sbjct: 115 RLIIRNLSFKCSEDDLKTAFTPYGTVLEVNIPRKPD-GKMRGFAFVQFKNLLEAGKALKG 173
Query: 278 FNGQKFGKRPIAVDWAVPKNIY 299
N ++ R +AVDWAV K+ Y
Sbjct: 174 MNMKEIKGRTVAVDWAVAKDKY 195
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 100/233 (42%), Gaps = 58/233 (24%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T+FI NL F+ + E++ + FG++ VLH T+ KG GF +F T EAA ++A
Sbjct: 338 TVFIRNLSFESEEEDLGEVLQQFGDLKYVRIVLHPDTEHSKGCGFAQFMTQEAAQKCLAA 397
Query: 487 -SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPA 545
S G G+ L GR L +ID LA
Sbjct: 398 ASPEAEGGGLKLDGRLL--------------KID-------------LA----------- 419
Query: 546 AEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSR 605
V+ D+ +K Q KK T + N +++R L+ G K +
Sbjct: 420 ---VTRDEAAKLQTKKVKKPTGTR--NLYLAREGLI---------RAGTKAAEGVSAADM 465
Query: 606 ASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNP 658
A +++ + ++ LK TK S G AF EF +H+HAL ALR +NNNP
Sbjct: 466 AKRER-----CRVMRDLKAVHGKTKGQSLGYAFAEFQKHEHALRALRHINNNP 513
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV 43
+VT+KGS RGFGYV F+++ED RA +K T+ G KI V
Sbjct: 35 VVTEKGSKACRGFGYVTFSMLEDVQRA--LKEITTFEGCKINV 75
>gi|402086828|gb|EJT81726.1| nucleolar protein 4 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 749
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 63/118 (53%), Gaps = 3/118 (2%)
Query: 218 KLIIRNIPFKAKVNE-IKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
KLIIRN+P+ K +E + +F G V +P+N G GF F+ +++AE+AI+
Sbjct: 163 KLIIRNLPWSIKSSEQLSALFKGFGKVKFADLPNNK--GKLSGFGFITLRGRKNAETAIE 220
Query: 277 KFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASD 334
K NG+ RPIAVDWAV K+++ A K + S + DD+ + S+
Sbjct: 221 KLNGKTVDGRPIAVDWAVEKSVWEQQQAPEAETPKKKSAAKETSKERKSDDEPKPKSN 278
>gi|301096303|ref|XP_002897249.1| mannitol dehydrogenase, putative [Phytophthora infestans T30-4]
gi|262107334|gb|EEY65386.1| mannitol dehydrogenase, putative [Phytophthora infestans T30-4]
Length = 543
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 217 WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
+ L + N+PF+ +E++D+FS G + +VYIP + S+GFAFV+F KRDAE AI
Sbjct: 357 FTLKVDNVPFQIGSDELRDLFSKFGEIGDVYIPRARGSNESRGFAFVRFIEKRDAEDAID 416
Query: 277 KFNGQKFGKRPIAVDWAV------PKNIYS 300
GQ+F R + V +A P+ YS
Sbjct: 417 GMEGQEFQGRDLRVQFAKQRRPDNPREFYS 446
>gi|170585176|ref|XP_001897362.1| RNA recognition motif domain containing protein [Brugia malayi]
gi|158595237|gb|EDP33806.1| RNA recognition motif domain containing protein [Brugia malayi]
Length = 340
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +R + + A+ ++++ +F +G V +VYIP + T S+GFA+VKF RDAE A+++
Sbjct: 16 LYVRQVHYSARPDDLRALFEQMGPVRDVYIPLDYYTRESRGFAYVKFEFTRDAEDALREL 75
Query: 279 NGQKFGKRPIAVDWA 293
NG R I V+WA
Sbjct: 76 NGTSILGRRIEVEWA 90
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 7 SNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHA 46
+ E RGF YV+F DA A+ NGTS+ GR+I V+ A
Sbjct: 51 TRESRGFAYVKFEFTRDAEDALRELNGTSILGRRIEVEWA 90
>gi|116831499|gb|ABK28702.1| unknown [Arabidopsis thaliana]
Length = 237
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L+IRN+P A+ N+++D F G + ++Y+P N TG +GF FVK+ DA A+++
Sbjct: 49 LLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAMKRM 108
Query: 279 NGQKFGKRPIAVDWA-----VPKNIYSSGGAAA 306
N + G R IA+ +A P+ + ++ G +
Sbjct: 109 NHKVIGGREIAIVFAEENRKTPQEMRTTNGTSG 141
>gi|30687014|ref|NP_197382.3| SC35-like splicing factor 28 [Arabidopsis thaliana]
gi|91806878|gb|ABE66166.1| 28 kDa SC35-like splicing factor [Arabidopsis thaliana]
gi|332005232|gb|AED92615.1| SC35-like splicing factor 28 [Arabidopsis thaliana]
Length = 236
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L+IRN+P A+ N+++D F G + ++Y+P N TG +GF FVK+ DA A+++
Sbjct: 49 LLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAMKRM 108
Query: 279 NGQKFGKRPIAVDWA-----VPKNIYSSGGAAA 306
N + G R IA+ +A P+ + ++ G +
Sbjct: 109 NHKVIGGREIAIVFAEENRKTPQEMRTTNGTSG 141
>gi|384254118|gb|EIE27592.1| translation initiation factor 3, RNA-binding subunit [Coccomyxa
subellipsoidea C-169]
Length = 285
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 94/190 (49%), Gaps = 22/190 (11%)
Query: 109 ADKEDC-SQKQRVARTVIIGGLLNADMAEEVHR-LAGSIGTVCSVTYPLPKEELEQHGLA 166
A+KED S Q ++ ++G L + + R LA + G + + P P E+ E GL
Sbjct: 112 AEKEDLKSALQGSDKSAVVGSLRDMLYRRRMERQLALARGQIAAPERP-PDEDSEAGGLP 170
Query: 167 QEGCKMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPF 226
Q G K + A A++A G ++ R+ E S + + N+
Sbjct: 171 QAGSK---PGGYVPPSRRAGATMA-------DGDSMRRRE---ENS------VRVTNLSE 211
Query: 227 KAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKR 286
+ ++++++FSP G + +YI ++ +TG S+GFAFV F + DA A+QK +G +
Sbjct: 212 DTREDDLRELFSPFGPISRIYIAYDRETGESRGFAFVNFVHREDAARAVQKLDGHGYDNL 271
Query: 287 PIAVDWAVPK 296
+ V++A P+
Sbjct: 272 ILRVEFAAPR 281
>gi|305855162|ref|NP_001182263.1| ELAV-like protein 1 [Sus scrofa]
gi|285818484|gb|ADC38915.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 [Sus
scrofa]
gi|456753432|gb|JAA74168.1| ELAV-like 1 (Hu antigen R) [Sus scrofa]
Length = 326
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 86/189 (45%), Gaps = 14/189 (7%)
Query: 112 EDCSQKQRVARTVIIGGLLNADMA-EEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGC 170
EDC + + RT +I L +M EE+ L SIG + S L ++++ H L
Sbjct: 11 EDC--RDDIGRTNLIVNYLPQNMTQEELRSLFSSIGEIESAK--LIRDKVAGHSLGY--- 63
Query: 171 KMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKV 230
V Y T K A ++ L+ ++ T+ + L I +P
Sbjct: 64 ----GFVNYVTAKDAERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQ 119
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK--FGKRPI 288
+++DMFSP G + N + + TGLS+G AF++F + +AE AI FNG K PI
Sbjct: 120 KDVEDMFSPFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPI 179
Query: 289 AVDWAVPKN 297
V +A N
Sbjct: 180 TVKFAANPN 188
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 111/295 (37%), Gaps = 29/295 (9%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
++ K + G+G+V + +DA RA+ NG + + I V +A R S E +
Sbjct: 51 LIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRLQSKTIKVSYA--RPSSEVIKDA-- 106
Query: 61 QEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQRV 120
+ + +TM KD + +++ S V + G+ + S+ +
Sbjct: 107 -NLYISGLPRTMTQKD--VEDMFSPFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEE- 162
Query: 121 ARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQ---EGCKMDASAV 177
A T G H+ GS + P + L+Q + V
Sbjct: 163 AITSFNG-----------HKPPGSSEPITVKFAANPNQNKNVALLSQLYHSPARRFGGPV 211
Query: 178 LYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMF 237
+ + + + + H + G V G+ + W + I N+ A + MF
Sbjct: 212 HHQAQRFRFSPMGVDHMSGLSGVNV-------PGNASSGWCIFIYNLGQDADEGILWQMF 264
Query: 238 SPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDW 292
P G V NV + + +T KGF FV T +A AI NG + G + + V +
Sbjct: 265 GPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEASMAIASLNGYRLGDKILQVSF 319
>gi|9843655|emb|CAC03601.1| SC35-like splicing factor SCL28, 28 kD [Arabidopsis thaliana]
Length = 236
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 55/93 (59%), Gaps = 5/93 (5%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L+IRN+P A+ N+++D F G + ++Y+P N ++G +GF FVK+ DA A+++
Sbjct: 49 LLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNFNSGEPRGFGFVKYRYAEDAAEAMKRM 108
Query: 279 NGQKFGKRPIAVDWA-----VPKNIYSSGGAAA 306
N + G R IA+ +A P+ + ++ G +
Sbjct: 109 NHKVIGGREIAIVFAEENRKTPQEMRTTNGTSG 141
>gi|26452521|dbj|BAC43345.1| putative Serine/arginine rich protein [Arabidopsis thaliana]
Length = 236
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L+IRN+P A+ N+++D F G + ++Y+P N TG +GF FVK+ DA A+++
Sbjct: 49 LLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAMKRM 108
Query: 279 NGQKFGKRPIAVDWA 293
N + G R IA+ +A
Sbjct: 109 NHKVIGGREIAIVFA 123
>gi|348671618|gb|EGZ11439.1| hypothetical protein PHYSODRAFT_435859 [Phytophthora sojae]
Length = 92
Score = 68.9 bits (167), Expect = 9e-09, Method: Composition-based stats.
Identities = 33/77 (42%), Positives = 50/77 (64%)
Query: 217 WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
+ L + N+PF+ +E++D+FS G + +VYIP + S+GFAFV+F KRDAE AI+
Sbjct: 7 FTLKVDNVPFQIGSDELRDLFSKFGEIGDVYIPRARGSNESRGFAFVRFMEKRDAEDAIE 66
Query: 277 KFNGQKFGKRPIAVDWA 293
GQ+F R + V +A
Sbjct: 67 GMEGQEFQGRDLRVQFA 83
Score = 39.3 bits (90), Expect = 7.6, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 5 KGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHR 49
+GSNE RGF +V+F DA A+E G GR + V+ A R
Sbjct: 42 RGSNESRGFAFVRFMEKRDAEDAIEGMEGQEFQGRDLRVQFAKQR 86
>gi|213406493|ref|XP_002174018.1| nucleolar protein [Schizosaccharomyces japonicus yFS275]
gi|212002065|gb|EEB07725.1| nucleolar protein [Schizosaccharomyces japonicus yFS275]
Length = 690
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 125/290 (43%), Gaps = 59/290 (20%)
Query: 425 QNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFK--------- 475
++TIFI NL F+ + + Q F FG + V T +G GF+KF+
Sbjct: 284 ESTIFIRNLLFETTEQALYQHFRQFGPLEYAKIVKDYATGLSQGRGFVKFRYQNDYEACL 343
Query: 476 -------TVEAATA------AVSASK----TTSGLGIF-LKGRQLTVLKALDKKLAH--D 515
EA A +V AS+ + + F L GR L + A+ + A +
Sbjct: 344 ELAQQLPEPEAKAAEKHHLPSVLASEEFLDPDNNIAKFTLDGRLLLITPAVTQDEASRIN 403
Query: 516 KEIDKSKNETN----DHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQ-MLHEKKMTKLQS 570
+E K + D RNLYL EG I P +S+ D + RQ L +K ++
Sbjct: 404 EEGKKKRQLLQGKGVDKRNLYLINEGRITANHPLYNMLSETDRTLRQESLRTRKKLLERN 463
Query: 571 PNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVVSRASKQKPVIKQI-------------- 616
P HVS TRL I NL + + K L L AV + K ++Q
Sbjct: 464 PTLHVSLTRLSIRNLSRHINVKILGMLGRQAVRGFLEEVKQGVRQPLTQEELERDGMSKL 523
Query: 617 -------KFLQSLKKGKVDTKH----YSRGVAFVEFTEHQHALVALRVLN 655
K +LK+ KV T++ S+G F++++ H++AL+ALR LN
Sbjct: 524 PMPAASRKHGGALKQAKVQTENNGAGRSKGFGFLQYSAHKYALMALRWLN 573
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +RN+ F N++ D FS V + + + +TG SKGF FV F+ DA A+++
Sbjct: 9 LFVRNLTFSTTSNDLTDFFSNAAPVKHAVVVTDKETGQSKGFGFVTFSLHEDAVRALEEL 68
Query: 279 NGQKFGKRPIAVDWAVPK 296
+K R + +++A P+
Sbjct: 69 KNKKLDGRILRMEFAAPR 86
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 218 KLIIRNIPFKAK-VNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
+LI+RN+P+ K ++ F+ G V + +P G GFAFV + A+ A+
Sbjct: 109 RLIVRNLPWSVKKPKHLEPYFAKFGKVREIKVP-TKGGGRMCGFAFVWMKDRASAQKAMD 167
Query: 277 KFNGQKFGKRPIAVDWAVPKNIY 299
N + R +AVDWAV K+ +
Sbjct: 168 TLNATEIDGRVVAVDWAVSKDEF 190
>gi|299115735|emb|CBN74300.1| RNA binding protein [Ectocarpus siliculosus]
Length = 875
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 112/248 (45%), Gaps = 37/248 (14%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+P+ ++++D+F G++ V++P + D KGFAFV+F DA A+++
Sbjct: 334 RLFVRNLPYTCTEDDLRDLFGSFGMLSEVHLPVD-DVKKGKGFAFVQFVIPEDAGKALEQ 392
Query: 278 FNGQKFGKRPIAVDWAVP--KNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDD 335
+ F R + + +P + SSG A+G +GS G E D
Sbjct: 393 LDRHAFHGRLLHI---IPARRQPGSSGAEASGT---------AGSAATAGKSYKEKKEMD 440
Query: 336 SNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSD----------DSALVKGNK 385
+ + + NA F + + ++L + + ++ LVK NK
Sbjct: 441 RRARAGDTVGWNASFVRSDTVVDALADRLGVGKSDILDREEGDMAVRLALGETLLVKENK 500
Query: 386 EQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNT-IFICNLPFDLDNEEVKQ 444
E + V D+S L S+K K +G +E +T I + NLP+ + E+ +
Sbjct: 501 EYFEKEGV-------DLSVLESTKGKGSG----KGAEERSSTVILVKNLPYSAEAAELAK 549
Query: 445 RFSAFGEV 452
RF AFG+V
Sbjct: 550 RFGAFGDV 557
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 210 EGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKR 269
+G ++ K+IIRNIPF+A EI+++ S G + V +P D G +GFAFV F +
Sbjct: 749 QGDSLKRTKIIIRNIPFQATAKEIRELCSSFGQLKRVRLPKKFDGG-HRGFAFVDFLTAQ 807
Query: 270 DAESAIQKFNGQKFGKRPIAVDWA 293
+A A + F R + +WA
Sbjct: 808 EAMGAKKSLESTHFYGRHLVGEWA 831
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 216 KWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAI 275
K +LI++N+P + F+ G V + I D G S+ FAFV FT + DAE A+
Sbjct: 14 KTRLIVKNVPKHVDEKRLWQHFAERGEVSDAKIVRTKD-GKSRQFAFVGFTTESDAEEAL 72
Query: 276 QKFNGQKFGKRPIAVDWAVPKN 297
+ +N I V+ A PK
Sbjct: 73 KYYNQTFLDTSRIQVERAQPKG 94
>gi|407043472|gb|EKE41969.1| RNA recognition motif domain containing protein [Entamoeba nuttalli
P19]
Length = 395
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 90/180 (50%), Gaps = 5/180 (2%)
Query: 421 EDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAA 480
ED++ TIFI NL F+ EE+K++ +GEV + + +GTGF+ F+ A
Sbjct: 70 EDQIYRTIFIQNLSFETSEEELKEKMGEYGEVSYCKICMDKEKGISRGTGFVCFRRRGVA 129
Query: 481 TAAVSASKTTSG---LGIFLKGRQLTVLKALDKKLAHD--KEIDKSKNETNDHRNLYLAK 535
+ + SG I + GR+L + KA+ K+ A D K K D+RN+ LA
Sbjct: 130 EKVIEEAYMFSGSKESDIEIDGRRLILQKAIKKEQAKDTSNSKKKKKEGIKDNRNVSLAM 189
Query: 536 EGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLK 595
G + G++ + R ++ KL++ NF V++ R+ + N+PK+ +K +K
Sbjct: 190 VGQKTKEEYLQLGLTPSEAKMRLKAQMERNKKLKNVNFCVNKYRVCVRNIPKNTNKKMIK 249
>gi|336262061|ref|XP_003345816.1| hypothetical protein SMAC_07100 [Sordaria macrospora k-hell]
gi|380088590|emb|CCC13476.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 772
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query: 218 KLIIRNIPFKAKVNE-IKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
KLIIRN+P+ K +E + ++F P G V +P+ D G GF FV +++AE AI+
Sbjct: 158 KLIIRNLPWSIKKSEQLAELFKPYGKVRFADLPN--DKGKLSGFGFVTLRGRKNAEKAIE 215
Query: 277 KFNGQKFGKRPIAVDWAVPKNIY 299
NG + RP+AVDWAV K +
Sbjct: 216 AINGMEVDGRPLAVDWAVDKQTW 238
>gi|253744836|gb|EET00976.1| RNA binding protein, putative [Giardia intestinalis ATCC 50581]
Length = 1023
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 42/212 (19%)
Query: 490 TSGLGIFLKGRQLTVLKALDKKLAHDKEIDKS-KNETNDHRNLYLAKEGLILEGTP--AA 546
T+GL + + G LT+ A++K+ E +S K +T D RNL LA+ GL++ G A
Sbjct: 706 TNGL-LVINGSPLTLKPAIEKQQLKTIEKHRSEKTDTEDPRNLALARIGLLIPGIDGFAR 764
Query: 547 EGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAV---- 602
V +D+ KR + + + + H+SRTR+VI N+PK E+ + + I +
Sbjct: 765 ADVPPEDVRKRIKYWKTLKGLMTNQSIHISRTRIVIRNIPKEFDERRVSWIVIRSFGRIN 824
Query: 603 ---------VSRASKQKPVI---------KQIKFLQSLK--------------KGKVDTK 630
S A+ + V+ +++F + K +G +D +
Sbjct: 825 ESEARAMFDPSDANYEYKVLMRLLKSVGCTEMRFRRGTKAYNLVKSMDDAYNEEGYMDGQ 884
Query: 631 HYSRGVAFVEFTEHQHALVALRVLNNNPSKLF 662
H G FVEFT H+ AL L LNNNP +
Sbjct: 885 H--SGFCFVEFTSHESALRCLLALNNNPRSFY 914
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 132/340 (38%), Gaps = 60/340 (17%)
Query: 211 GSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTG--LSKGFAFVKFTCK 268
G+ + +I+RN+PF N I ++ V + +P T G L GFAF+
Sbjct: 231 GAYPRMTTVILRNLPFTIYANTIFEVIKNRYPVVELRLPSRTINGKTLGSGFAFLVLATH 290
Query: 269 RDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSS-----GGAAAGVQNKGDGN-------- 315
DA + + I +DW + KN + AA V + +G
Sbjct: 291 SDAVELVASAKLRILHHTSI-LDWGLDKNTFERQQQVIARAAGDVPDDPEGRSLSASKAS 349
Query: 316 --------SDSGSDDDLGDDDAETASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTST 367
+++G D+++ ++D +S+KE PS +++ + + + ++ T
Sbjct: 350 SSDASSSYNETGYSSISVDENSFVSAD---ASDKE--PSFELYEDGKTVIKPFVREVPGT 404
Query: 368 TGSLPSLSDDSALVKGNKEQDSDKTVNESAKVSDVSKLNSSK---SKPKSLKQTEGEDEL 424
PS D V S T N S + D K ++ +PKS + + ++E+
Sbjct: 405 EQDEPSYDPDKEQVYDENPDVSSNTDNLSELLDDEVKQQDAQGGVPEPKSNEVQDKQEEI 464
Query: 425 QNTIFICNLPFDLD----------------------------NEEVKQRFSAFGEVVSFV 456
+ TIF+ NLP + E+++ FSAFG V
Sbjct: 465 ERTIFVTNLPSRVTATRMAEAEKVLLAKNAKCRPQDILVSGLRYELRRLFSAFGMVRDVS 524
Query: 457 PVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIF 496
V++++ R G+ F+ FK AA A+ + F
Sbjct: 525 IVVNKMLDRHTGSAFIIFKKRGAALCAMEYYNSLKNQAFF 564
>gi|340504018|gb|EGR30510.1| metalloprotease m41 ftsh, putative [Ichthyophthirius multifiliis]
Length = 1045
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 94/184 (51%), Gaps = 28/184 (15%)
Query: 491 SGLGIFLKGRQLTVLKALDK----KLAHDKE------IDKSKN-------ETNDHRNLYL 533
+ + I LKGR+L L+A K K+ DK+ +DK K + RNL L
Sbjct: 108 TDIDIELKGRRLVFLEAKKKNDINKVMEDKKERNRITLDKVKTLDQLVKFDRQQKRNLQL 167
Query: 534 AKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLP-KSMTEK 592
A G+ + +S++D KR+ ++K+ KLQ+PN ++S+TR+ + NLP K E+
Sbjct: 168 ATIGIF----EVEKNMSEEDKQKRKQHIQEKLNKLQNPNNYISKTRIALMNLPKKQFEEE 223
Query: 593 GLKKLCIDAVVSRAS-----KQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHA 647
LK+ A + K P IKQ+ L+ +K + SRG+ F+EF H++A
Sbjct: 224 QLKEFTRKAFSQQKGKDFLLKHNP-IKQVLLLRDKQKLDQNGVPKSRGIGFLEFDNHENA 282
Query: 648 LVAL 651
L+ +
Sbjct: 283 LIFM 286
>gi|115473341|ref|NP_001060269.1| Os07g0615400 [Oryza sativa Japonica Group]
gi|23237933|dbj|BAC16506.1| putative oligouridylate binding protein [Oryza sativa Japonica
Group]
gi|113611805|dbj|BAF22183.1| Os07g0615400 [Oryza sativa Japonica Group]
gi|215737207|dbj|BAG96136.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767365|dbj|BAG99593.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637457|gb|EEE67589.1| hypothetical protein OsJ_25126 [Oryza sativa Japonica Group]
Length = 427
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 145 IGTV-CSVTYPLPKEELEQHGLAQEGCKM------DASAVLYTTVKSACASVALLHQKEI 197
+G V VT L +E + GL EGCK+ V Y +SA S+ L+ K+I
Sbjct: 69 VGNVHVQVTEALLREVFQSTGLV-EGCKLIRKEKSSYGFVDYYDRRSAALSILTLNGKQI 127
Query: 198 KGGTV---WARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDT 254
G + WA G T + + + ++ + + + FS + + + T
Sbjct: 128 FGQLIRVNWAYASGQREDTTDHFNIFVGDLSPEVTDSALFAFFSGYSSCSDARVMWDQKT 187
Query: 255 GLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDG 314
G S+G+ FV F ++DA+SAI NGQ G R I +WA + GA+ G Q D
Sbjct: 188 GRSRGYGFVSFRNQQDAQSAINDLNGQWLGSRQIRCNWA-------TKGASNGEQQTSDS 240
Query: 315 NSDSGSDDDLGDDDAETASDDS 336
+ + ++L +D E A++D+
Sbjct: 241 KNVADLTNNLTEDGKEKANEDA 262
>gi|410952831|ref|XP_003983081.1| PREDICTED: RNA-binding protein 28-like, partial [Felis catus]
Length = 302
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 215 QKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESA 274
+K +LIIRN+ FK ++++ +F+ G V V IP D G +GFAFV+F +A A
Sbjct: 112 KKARLIIRNLSFKCSEDDLRTVFAQYGAVLEVSIPRKPD-GKMRGFAFVQFKNLLEAGKA 170
Query: 275 IQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAG 307
++ N ++ R +AVDWAV K+ Y + +A+
Sbjct: 171 LKSMNMKEIKGRTVAVDWAVAKDKYKNTQSASA 203
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHA 46
+VT+KGS RGFGYV F+++ED RA +K T+ G KI V A
Sbjct: 35 VVTEKGSKACRGFGYVTFSMLEDVQRA--LKEITTFEGCKINVTVA 78
>gi|26347149|dbj|BAC37223.1| unnamed protein product [Mus musculus]
Length = 326
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 87/189 (46%), Gaps = 14/189 (7%)
Query: 112 EDCSQKQRVARTVIIGGLLNADMA-EEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGC 170
EDC + + RT +I L+ +M EE+ L SIG V S L ++++ H L
Sbjct: 11 EDC--RDDIGRTNLIVNYLHQNMTQEELRSLFSSIGEVESAK--LIRDKVAGHSLGY--- 63
Query: 171 KMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKV 230
V Y T K A +++ L+ ++ T+ + L I +P
Sbjct: 64 ----GFVNYVTAKDAERAISTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQ 119
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK--FGKRPI 288
+++DMFS G + N + + TGLS+G AF++F + +AE AI FNG K PI
Sbjct: 120 KDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPI 179
Query: 289 AVDWAVPKN 297
V +A N
Sbjct: 180 TVKFAANPN 188
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 111/305 (36%), Gaps = 41/305 (13%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
++ K + G+G+V + +DA RA+ NG + + I V +A R S E +
Sbjct: 51 LIRDKVAGHSLGYGFVNYVTAKDAERAISTLNGLRLQSKTIKVSYA--RPSSEVIKDA-- 106
Query: 61 QEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQRV 120
+ + +TM KD E S+ G+ + R L D Q +
Sbjct: 107 -NLYISGLPRTMTQKD-----VEDMFSRF---GRIINSRV-------LVD-----QTTGL 145
Query: 121 ARTVIIGGLLNADMAEEV------HRLAGSIGTVCSVTYPLPKEELEQHGLAQ---EGCK 171
+R V AEE H+ GS + P + L+Q +
Sbjct: 146 SRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNMALLSQLYHSPAR 205
Query: 172 MDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVN 231
V + + + + + H I G V G+ + W + I N+ A
Sbjct: 206 RFGGPVHHQAQRFRFSPMGVDHMSGISGVNV-------PGNASSGWCIFIYNLGQDADEG 258
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
+ MF P G V NV + + +T KGF FV T +A AI + G + + V
Sbjct: 259 ILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLKRYRLGDKILQVS 318
Query: 292 WAVPK 296
+ K
Sbjct: 319 FKTNK 323
>gi|85109471|ref|XP_962933.1| hypothetical protein NCU06217 [Neurospora crassa OR74A]
gi|28924577|gb|EAA33697.1| hypothetical protein NCU06217 [Neurospora crassa OR74A]
Length = 772
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 218 KLIIRNIPFKAKVNE-IKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
KLIIRN+P+ K E + ++F P G V +P+ D G GF FV +++AE AI+
Sbjct: 157 KLIIRNLPWSIKKPEQLAELFKPYGKVRFADLPN--DKGKLSGFGFVTLRGRKNAEKAIE 214
Query: 277 KFNGQKFGKRPIAVDWAVPKNIYS 300
NG + RP+AVDWAV K ++
Sbjct: 215 AVNGMEVDGRPLAVDWAVDKQTWA 238
>gi|15021899|dbj|BAB62225.1| Hu/elav class neuron-specific RNA binding protein [Branchiostoma
belcheri]
Length = 326
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 127/317 (40%), Gaps = 36/317 (11%)
Query: 209 GEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCK 268
G +K K LI+ +P +EIK +FS +G V + + + TG S G+ FV +
Sbjct: 15 GSSTKDSKTNLIVNYLPQTMTQDEIKSLFSSIGEVESCKLIRDKVTGQSLGYGFVNYVKP 74
Query: 269 RDAESAIQKFNGQKFGKRPIAVDWAVPK-------NIYSSGGAAAGVQNKGDGNSDSGSD 321
+DAE AI NG + + I V +A P N+Y SG Q +G ++
Sbjct: 75 QDAEKAINTLNGLRLQAKTIKVSYARPSSQAIKDANLYVSGLPKTMTQQDLEGLFEAH-- 132
Query: 322 DDLGDDDAETASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALV 381
G D + + + FD+ V+ R + T G +P + D V
Sbjct: 133 ---GRIITSRILFDPVTGQSRGV-GFVRFDQRVEAERAI----TELNGHIPKGATDPITV 184
Query: 382 K--GNKEQDSDKTVNESAKVSDVSK-LNSSKSKPKSLKQTE------GEDELQN-----T 427
K N Q+ K + ++A ++ + L + + + G + N
Sbjct: 185 KFANNPSQNHAKALQQAAYLAPARRYLGPMLHQTARFRYSPMGADPMGVGNIPNGGTGFC 244
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
IF+ NL D ++ + Q F FG V + + T + KG GF+ + A A++
Sbjct: 245 IFVYNLAPDTEDSVLWQLFGPFGAVTNVKVIRDFQTNKCKGFGFVTMAHYDEAVVAIAQL 304
Query: 488 KTTSGLGIFLKGRQLTV 504
G L GR L V
Sbjct: 305 N-----GYCLGGRVLQV 316
>gi|255089439|ref|XP_002506641.1| predicted protein [Micromonas sp. RCC299]
gi|226521914|gb|ACO67899.1| predicted protein [Micromonas sp. RCC299]
Length = 285
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 123/290 (42%), Gaps = 56/290 (19%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L + NIP+ V+E++ +FS G + V IP G S+G+ V+++ +A+ AIQ
Sbjct: 8 RLYVGNIPWSTTVDELRGIFSGCGTITLVDIPTGRQ-GRSRGYGIVEYSNVNEAQVAIQT 66
Query: 278 FNGQKFGKRPIAV--DWAVPKNIYS-SGGAAAGVQNKGDGNSDSGSDDDLGD-------- 326
+G G R I V D A K+ S SGG + + GD + G +G+
Sbjct: 67 LDGHTLGDRNITVREDKAPTKSAPSKSGGNRSTI---GDTPAADGCRCYVGNLAWETNEE 123
Query: 327 ------------DDAETASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSL 374
AE A S+ L DF E D A +N L ++ L
Sbjct: 124 SLIAHCSQVGTVVQAEVAKQPGGRSKGWGL---VDF-ETPDAANSAINTLHNS-----DL 174
Query: 375 SDDSALVKGNKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLP 434
S +V+ + ++K+ +A +P E LQ I + NLP
Sbjct: 175 QGRSIIVRLERAGGANKSGGPNA------------GRP------EASSGLQ--IVVRNLP 214
Query: 435 FDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV 484
+ +E+++Q F G V+ V H T R KG G + F+T E A AA+
Sbjct: 215 WSTTSEDLRQVFQQVGTVIKAEAVCHADTGRSKGWGTVLFETREQAQAAI 264
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 64/126 (50%), Gaps = 12/126 (9%)
Query: 177 VLYTTVKSACASVALLHQKEIKGGTVWAR--------QLGGEGS----KTQKWKLIIRNI 224
V + T +A +++ LH +++G ++ R + GG + + ++++RN+
Sbjct: 154 VDFETPDAANSAINTLHNSDLQGRSIIVRLERAGGANKSGGPNAGRPEASSGLQIVVRNL 213
Query: 225 PFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFG 284
P+ +++ +F VG V + DTG SKG+ V F + A++AIQ FNG +
Sbjct: 214 PWSTTSEDLRQVFQQVGTVIKAEAVCHADTGRSKGWGTVLFETREQAQAAIQGFNGVELE 273
Query: 285 KRPIAV 290
RP+ +
Sbjct: 274 HRPMQI 279
>gi|298707093|emb|CBJ29885.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_a
[Ectocarpus siliculosus]
Length = 289
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 49/75 (65%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+P+ + +++++ +F G + +VY+P + TG +GFAFV+F +RDA+ AI +
Sbjct: 29 LKVDNVPYNSSIDDLRRIFEKYGELGDVYMPRDLRTGEPRGFAFVRFMDQRDADDAIDRM 88
Query: 279 NGQKFGKRPIAVDWA 293
+G+ F R + + +A
Sbjct: 89 DGEFFAGRELRIQYA 103
>gi|260821286|ref|XP_002605964.1| hypothetical protein BRAFLDRAFT_92208 [Branchiostoma floridae]
gi|229291301|gb|EEN61974.1| hypothetical protein BRAFLDRAFT_92208 [Branchiostoma floridae]
Length = 330
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 132/333 (39%), Gaps = 38/333 (11%)
Query: 193 HQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNT 252
H GG+ R G ++ K LI+ +P +EIK +FS +G V + + +
Sbjct: 5 HANNTGGGSPDGRT--GSSTEDSKTNLIVNYLPQTMTQDEIKSLFSSIGEVESCKLIRDK 62
Query: 253 DTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPK-------NIYSSGGAA 305
TG S G+ FV + +DAE AI NG + + I V +A P N+Y SG
Sbjct: 63 VTGQSLGYGFVNYVKPQDAEKAINTLNGLRLQAKTIKVSYARPSSQAIKDANLYVSGLPK 122
Query: 306 AGVQNKGDGNSDSGSDDDLGDDDAETASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLT 365
Q +G ++ G D + + + FD+ V+ R + T
Sbjct: 123 TMTQQDLEGLFEAH-----GRIITSRILFDPVTGQSRGV-GFVRFDQRVEAERAI----T 172
Query: 366 STTGSLPSLSDDSALVK--GNKEQDSDKTVNESAKVSDVSK-LNSSKSKPKSLKQTE--- 419
G +P + D VK N Q+ K + ++A ++ + L + + +
Sbjct: 173 ELNGHIPKGATDPITVKFANNPSQNHAKALQQAAYLAPARRYLGPMLHQTARFRYSPMGA 232
Query: 420 ---GEDELQN-----TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGF 471
G + N IF+ NL D ++ + Q F FG V + + T + KG GF
Sbjct: 233 DPMGVGNIPNGGTGFCIFVYNLAPDTEDSVLWQLFGPFGAVTNVKVIRDFQTNKCKGFGF 292
Query: 472 LKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV 504
+ + A A++ G L GR L V
Sbjct: 293 VTMAHYDEAVVAIAQLN-----GYCLGGRVLQV 320
>gi|336469459|gb|EGO57621.1| hypothetical protein NEUTE1DRAFT_122010 [Neurospora tetrasperma
FGSC 2508]
gi|350290896|gb|EGZ72110.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 771
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 218 KLIIRNIPFKAKVNE-IKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
KLIIRN+P+ K E + ++F P G V +P+ D G GF FV +++AE AI+
Sbjct: 157 KLIIRNLPWSIKKPEQLAELFKPYGKVRFADLPN--DKGKLSGFGFVTLRGRKNAEKAIE 214
Query: 277 KFNGQKFGKRPIAVDWAVPKNIYS 300
NG + RP+AVDWAV K ++
Sbjct: 215 AVNGLEVDGRPLAVDWAVDKQTWA 238
>gi|323449244|gb|EGB05134.1| hypothetical protein AURANDRAFT_1296 [Aureococcus anophagefferens]
Length = 464
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 210 EGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKR 269
+ KT K KL++RN+ F VN++K +F G + V +P D G +GFAFV+FT R
Sbjct: 375 DAKKTSKTKLVVRNLAFAVVVNDVKQLFEAFGALKKVRLPKRFD-GRHRGFAFVEFTNPR 433
Query: 270 DAESAIQKFNGQKFGKRPIAVDWAVP 295
DA +A R + +DWA P
Sbjct: 434 DAAAARSSLKSAHLYGRHLVIDWADP 459
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L + N+P+ A EI FSP G V V+ P + +T GFAFV F AE+A
Sbjct: 15 RLYVANLPYDASEEEILAYFSPHGTVSEVHQPLSKETRAPLGFAFVTFVLPTAAEAATAS 74
Query: 278 FNGQKFGKRPIAV 290
+G F R ++V
Sbjct: 75 LDGASFRGRALSV 87
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 118/291 (40%), Gaps = 35/291 (12%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
++++N+P A E++ MF+P G+V +V + + T A V+F +A +A +K
Sbjct: 194 VLVKNLPADASAAELRKMFAPHGVVHDVLLAPSRTT------AVVEFEEPSEARAAFKKL 247
Query: 279 NGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDDSNS 338
++F P+ + WA K+ + ++ V + + E + +
Sbjct: 248 AYRRFRHVPLYLGWAPEKSDAAPAAPSSTVPDAAAADD------------DEEVHEGATV 295
Query: 339 SEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTVNESAK 398
K N +F R + SLP+ +D +G + D + A
Sbjct: 296 FVK-----NLNFKTTAAALRAHFSAFGVRACSLPA-ADGERNNRGYGFLEFDGADDARAA 349
Query: 399 VSDVSKLNSSK-----SKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVV 453
++ L+ SK K + + + + + + NL F + +VKQ F AFG +
Sbjct: 350 IATTRPLDGHALGLELSKRKIARAPDAKKTSKTKLVVRNLAFAVVVNDVKQLFEAFGALK 409
Query: 454 SFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV 504
V + + R +G F++F A AA S+ K+ L GR L +
Sbjct: 410 K-VRLPKRFDGRHRGFAFVEFTNPRDAAAARSSLKSAH-----LYGRHLVI 454
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+++ NLP+D EE+ FS G V L + T+ P G F+ F AA AA
Sbjct: 16 LYVANLPYDASEEEILAYFSPHGTVSEVHQPLSKETRAPLGFAFVTFVLPTAAEAA---- 71
Query: 488 KTTSGLGIFLKGRQLTVLKA 507
T S G +GR L+V A
Sbjct: 72 -TASLDGASFRGRALSVAAA 90
>gi|339237553|ref|XP_003380331.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316976854|gb|EFV60053.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 645
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
K+I+RNIPF+A V EI +F G V +V +P + G +GF FV+F CK DAE A +
Sbjct: 538 KIIVRNIPFQASVKEITKLFKVFGNVQSVRLPKKSPNGQHRGFGFVEFNCKADAEKAFKH 597
Query: 278 F--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 598 LGVSTHLYGRR-LVLEWA 614
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 15/108 (13%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ +RN+P++ ++K+ G + V ++ TG KGFA VKF +A +
Sbjct: 225 IFLRNLPYQCTEEDLKNWLKTFGPIAEVNFHVDSKTGKPKGFALVKFVFPENALKVFTEC 284
Query: 279 NGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDG-NSDSGSDDDLG 325
+G F R + + AG +N+ + N+ S DDD G
Sbjct: 285 DGSIFQGRVVHI--------------LAGFENEDETKNAKSEEDDDDG 318
>gi|159109081|ref|XP_001704807.1| RNA binding protein, putative [Giardia lamblia ATCC 50803]
gi|157432880|gb|EDO77133.1| RNA binding protein, putative [Giardia lamblia ATCC 50803]
Length = 1025
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 48/215 (22%)
Query: 490 TSGLGIFLKGRQLTVLKALDKKLAHDKEIDKS-KNETNDHRNLYLAKEGLILEGTPAAEG 548
T+GL + + G LT+ A++++ E +S K +T D RNL LA+ GL++ P +G
Sbjct: 708 TNGL-LVINGSPLTLKPAIERQQLKTIEKHRSEKTDTEDPRNLSLARIGLLI---PGIDG 763
Query: 549 VSDDDMSKRQMLHEKKMTK-----LQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCI---- 599
S D+ + K K + + + H+SRTR+VI N+PK E+ + + I
Sbjct: 764 FSKADVPPEDVRKRIKYWKTLKGLMTNQSIHISRTRIVIRNIPKEFDERKISWIVIRSFG 823
Query: 600 -------DAVVSRASKQKPVIKQIKFLQSL-------------------------KKGKV 627
A+ + K ++ L+S+ ++G +
Sbjct: 824 RINESEARAMFDPSDKNYEYKVLMRLLKSVGCTEMRFRRGPKAYNLVKSMDDAYNEEGYM 883
Query: 628 DTKHYSRGVAFVEFTEHQHALVALRVLNNNPSKLF 662
D +H G FVEFT H+ AL L LNNNP +
Sbjct: 884 DGQH--SGFCFVEFTSHESALRCLLALNNNPRSFY 916
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 133/338 (39%), Gaps = 54/338 (15%)
Query: 211 GSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSK--GFAFVKFTCK 268
G+ + +I+RN+PF N I + V + +P T +G ++ GFAF+
Sbjct: 231 GAYPRMTTVILRNLPFTVYANTIFEAVRDKYPVIELRLPSRTISGRTQGSGFAFLVLATH 290
Query: 269 RDAESAIQKFNGQKFGKRPIAVDWAVPKNIY---------SSGGAAAGVQNKGDGNSDSG 319
DA + + + I +DW + KN + ++G +N+ S+SG
Sbjct: 291 SDAVALVSSVKLRILHHTSI-LDWGLDKNTFERQQQVIARAAGDTIDDTENRSRSVSESG 349
Query: 320 SDDDLGDDDAETASDDSNSSEKEDLPSNADFDEE--VDIARKVLNKLTSTTGSLPSLSDD 377
S+ D D AS +++E S D E ++ + +P+ D
Sbjct: 350 SESDGMDYSYSRASSSDSNTEGSSFSSAGASDNEPSFELYEDGKTIIKPFVREVPAKDQD 409
Query: 378 SALVKGNKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTE-----------GEDELQN 426
NKEQ D+ N S+ ++S+L ++K + QTE ++E++
Sbjct: 410 EPSYDPNKEQAYDEDPNVSSNTDNLSELLGDETKQQD-AQTEVPGTKSDGTKDKQEEIER 468
Query: 427 TIFICNLPFDLD----------------------------NEEVKQRFSAFGEVVSFVPV 458
TIF+ NLP + E+++ FSAFG V V
Sbjct: 469 TIFVTNLPSRVTAARMAEAEKVLMAKNAKCRPQDILVSGLRYELRRLFSAFGMVRDVSIV 528
Query: 459 LHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIF 496
++++ R G+ F+ FK AA A+ + F
Sbjct: 529 VNKMLDRHTGSAFIIFKKRGAALCAMEYYNSLKNQAFF 566
>gi|218200015|gb|EEC82442.1| hypothetical protein OsI_26865 [Oryza sativa Indica Group]
Length = 427
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 92/201 (45%), Gaps = 18/201 (8%)
Query: 145 IGTV-CSVTYPLPKEELEQHGLAQEGCKM------DASAVLYTTVKSACASVALLHQKEI 197
+G V VT L +E + GL EGCK+ V Y +SA ++ L+ K+I
Sbjct: 69 VGNVHVQVTEALLREVFQSTGLV-EGCKLIRKEKSSYGFVDYYDRRSAALAILTLNGKQI 127
Query: 198 KGGTV---WARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDT 254
G + WA G T + + + ++ + + + FS + + + T
Sbjct: 128 FGQLIRVNWAYASGQREDTTDHFNIFVGDLSPEVTDSALFAFFSGYSSCSDARVMWDQKT 187
Query: 255 GLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDG 314
G S+G+ FV F ++DA+SAI NGQ G R I +WA + GA+ G Q D
Sbjct: 188 GRSRGYGFVSFRNQQDAQSAINDLNGQWLGSRQIRCNWA-------TKGASNGEQQTSDS 240
Query: 315 NSDSGSDDDLGDDDAETASDD 335
+ + ++L +D E A++D
Sbjct: 241 KNVADLTNNLTEDGKEKANED 261
>gi|74138233|dbj|BAE28602.1| unnamed protein product [Mus musculus]
Length = 326
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 86/189 (45%), Gaps = 14/189 (7%)
Query: 112 EDCSQKQRVARTVIIGGLLNADMA-EEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGC 170
EDC + + RT +I L +M EE+ L SIG V S L ++++ H L
Sbjct: 11 EDC--RDDIGRTNLIVNYLPQNMTQEELRSLFSSIGEVESAK--LIRDKVAGHSLGY--- 63
Query: 171 KMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKV 230
V Y T K A +++ L+ ++ T+ + L I +P
Sbjct: 64 ----GFVNYVTAKDAERAISTLNGLRLQSKTIKVSYAHPSSEVIKDANLYISGLPRTMTQ 119
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK--FGKRPI 288
+++DMFS G + N + + TGLS+G AF++F + +AE AI FNG K PI
Sbjct: 120 KDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPI 179
Query: 289 AVDWAVPKN 297
V +A N
Sbjct: 180 TVKFAANPN 188
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 114/307 (37%), Gaps = 45/307 (14%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
++ K + G+G+V + +DA RA+ NG + + I V +A S+V
Sbjct: 51 LIRDKVAGHSLGYGFVNYVTAKDAERAISTLNGLRLQSKTIKVSYA-------HPSSEVI 103
Query: 61 QE--VQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQ 118
++ + + +TM KD E S+ G+ + R L D Q
Sbjct: 104 KDANLYISGLPRTMTQKD-----VEDMFSRF---GRIINSRV-------LVD-----QTT 143
Query: 119 RVARTVIIGGLLNADMAEEV------HRLAGSIGTVCSVTYPLPKEELEQHGLAQ---EG 169
++R V AEE H+ GS + P + L+Q
Sbjct: 144 GLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNMALLSQLYHSP 203
Query: 170 CKMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAK 229
+ V + + + + + H I G V G+ + W + I N+ A
Sbjct: 204 ARRFGGPVHHQAQRFRFSPMGVDHMSGISGVNV-------PGNASSGWCIFIYNLGQDAD 256
Query: 230 VNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIA 289
+ MF P G V NV + + +T KGF FV T +A AI NG + G + +
Sbjct: 257 EGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQ 316
Query: 290 VDWAVPK 296
V + K
Sbjct: 317 VSFKTNK 323
>gi|261203287|ref|XP_002628857.1| ribonucleoprotein [Ajellomyces dermatitidis SLH14081]
gi|239586642|gb|EEQ69285.1| ribonucleoprotein [Ajellomyces dermatitidis SLH14081]
Length = 510
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L I NI F A N I + FS G + V +P + ++G KGF +V+F+ +A SA Q
Sbjct: 365 LFIGNISFSADENMISEAFSEHGSILGVRLPTDPESGRPKGFGYVQFSSVDEARSAFQTL 424
Query: 279 NGQKFGKRPIAVDWAVPK 296
NG G RP+ +D++ P+
Sbjct: 425 NGADLGGRPMRLDFSTPR 442
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 32/59 (54%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV 484
+T+FI N+ F D + + FS G ++ + RPKG G+++F +V+ A +A
Sbjct: 363 DTLFIGNISFSADENMISEAFSEHGSILGVRLPTDPESGRPKGFGYVQFSSVDEARSAF 421
>gi|31542602|ref|NP_034615.2| ELAV-like protein 1 [Mus musculus]
gi|157818153|ref|NP_001102318.1| ELAV-like protein 1 [Rattus norvegicus]
gi|354488231|ref|XP_003506274.1| PREDICTED: ELAV-like protein 1 [Cricetulus griseus]
gi|341940489|sp|P70372.2|ELAV1_MOUSE RecName: Full=ELAV-like protein 1; AltName: Full=Elav-like generic
protein; AltName: Full=Hu-antigen R; Short=HuR; AltName:
Full=MelG
gi|26348505|dbj|BAC37892.1| unnamed protein product [Mus musculus]
gi|83308037|emb|CAI77902.1| HuR RNA binding protein [Spalax judaei]
gi|148690049|gb|EDL21996.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R), isoform CRA_a [Mus musculus]
gi|148690050|gb|EDL21997.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R), isoform CRA_a [Mus musculus]
gi|149015619|gb|EDL75000.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149015620|gb|EDL75001.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) (predicted), isoform CRA_a [Rattus
norvegicus]
gi|197245826|gb|AAI68972.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [Rattus norvegicus]
gi|208609536|dbj|BAG72208.1| HuR [Rattus norvegicus]
Length = 326
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 86/189 (45%), Gaps = 14/189 (7%)
Query: 112 EDCSQKQRVARTVIIGGLLNADMA-EEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGC 170
EDC + + RT +I L +M EE+ L SIG V S L ++++ H L
Sbjct: 11 EDC--RDDIGRTNLIVNYLPQNMTQEELRSLFSSIGEVESAK--LIRDKVAGHSLGY--- 63
Query: 171 KMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKV 230
V Y T K A +++ L+ ++ T+ + L I +P
Sbjct: 64 ----GFVNYVTAKDAERAISTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQ 119
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK--FGKRPI 288
+++DMFS G + N + + TGLS+G AF++F + +AE AI FNG K PI
Sbjct: 120 KDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPI 179
Query: 289 AVDWAVPKN 297
V +A N
Sbjct: 180 TVKFAANPN 188
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 113/305 (37%), Gaps = 41/305 (13%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
++ K + G+G+V + +DA RA+ NG + + I V +A R S E +
Sbjct: 51 LIRDKVAGHSLGYGFVNYVTAKDAERAISTLNGLRLQSKTIKVSYA--RPSSEVIKDA-- 106
Query: 61 QEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQRV 120
+ + +TM KD E S+ G+ + R L D Q +
Sbjct: 107 -NLYISGLPRTMTQKD-----VEDMFSRF---GRIINSRV-------LVD-----QTTGL 145
Query: 121 ARTVIIGGLLNADMAEEV------HRLAGSIGTVCSVTYPLPKEELEQHGLAQ---EGCK 171
+R V AEE H+ GS + P + L+Q +
Sbjct: 146 SRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNMALLSQLYHSPAR 205
Query: 172 MDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVN 231
V + + + + + H I G V G+ + W + I N+ A
Sbjct: 206 RFGGPVHHQAQRFRFSPMGVDHMSGISGVNV-------PGNASSGWCIFIYNLGQDADEG 258
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
+ MF P G V NV + + +T KGF FV T +A AI NG + G + + V
Sbjct: 259 ILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVS 318
Query: 292 WAVPK 296
+ K
Sbjct: 319 FKTNK 323
>gi|393906774|gb|EJD74392.1| hypothetical protein, variant [Loa loa]
Length = 324
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 44/66 (66%)
Query: 228 AKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRP 287
++ ++++ +F +G V +VYIP + T S+GFA+VKF RDAE A++K NG RP
Sbjct: 5 SRPDDLRALFERMGPVRDVYIPLDYYTRESRGFAYVKFEFTRDAEDALRKLNGASILGRP 64
Query: 288 IAVDWA 293
I V+WA
Sbjct: 65 IEVEWA 70
>gi|239608318|gb|EEQ85305.1| nucleolin protein Nsr1 [Ajellomyces dermatitidis ER-3]
gi|327349518|gb|EGE78375.1| nucleolin protein Nsr1 [Ajellomyces dermatitidis ATCC 18188]
Length = 512
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L I NI F A N I + FS G + V +P + ++G KGF +V+F+ +A SA Q
Sbjct: 367 LFIGNISFSADENMISEAFSEHGSILGVRLPTDPESGRPKGFGYVQFSSVDEARSAFQTL 426
Query: 279 NGQKFGKRPIAVDWAVPK 296
NG G RP+ +D++ P+
Sbjct: 427 NGADLGGRPMRLDFSTPR 444
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 32/59 (54%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV 484
+T+FI N+ F D + + FS G ++ + RPKG G+++F +V+ A +A
Sbjct: 365 DTLFIGNISFSADENMISEAFSEHGSILGVRLPTDPESGRPKGFGYVQFSSVDEARSAF 423
>gi|26330019|dbj|BAC28748.1| unnamed protein product [Mus musculus]
Length = 326
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 86/189 (45%), Gaps = 14/189 (7%)
Query: 112 EDCSQKQRVARTVIIGGLLNADMA-EEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGC 170
EDC + + RT +I L +M EE+ L SIG V S L ++++ H L
Sbjct: 11 EDC--RDDIGRTNLIVNYLPQNMTQEELRSLFSSIGEVESAK--LIRDKVAGHSLGY--- 63
Query: 171 KMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKV 230
V Y T K A +++ L+ ++ T+ + L I +P
Sbjct: 64 ----GFVNYVTAKDAERAISTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQ 119
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK--FGKRPI 288
+++DMFS G + N + + TGLS+G AF++F + +AE AI FNG K PI
Sbjct: 120 KDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPI 179
Query: 289 AVDWAVPKN 297
V +A N
Sbjct: 180 TVKFAANPN 188
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 113/305 (37%), Gaps = 41/305 (13%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
++ K + G+G+V + +DA RA+ NG + + I V +A R S E +
Sbjct: 51 LIRDKVAGHSLGYGFVNYVTAKDAERAISTLNGLRLQSKTIKVSYA--RPSSEVIKDA-- 106
Query: 61 QEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQRV 120
+ + +TM KD E S+ G+ + R L D Q +
Sbjct: 107 -NLYISGLPRTMTQKD-----VEDMFSRF---GRIINSRV-------LVD-----QTTGL 145
Query: 121 ARTVIIGGLLNADMAEEV------HRLAGSIGTVCSVTYPLPKEELEQHGLAQ---EGCK 171
+R V AEE H+ GS + P + L+Q +
Sbjct: 146 SRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNMALLSQLYHSPAR 205
Query: 172 MDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVN 231
V + + + + + H I G V G+ + W + I N+ A
Sbjct: 206 RFGGPVHHQAQRFRFSPMGVDHMSGISGVNV-------PGNASSGWCIFIYNLGQDADEG 258
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
+ MF P G V NV + + +T KGF FV T +A AI NG + G + + V
Sbjct: 259 ILWRMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVS 318
Query: 292 WAVPK 296
+ K
Sbjct: 319 FKTNK 323
>gi|26344670|dbj|BAC35984.1| unnamed protein product [Mus musculus]
Length = 326
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 86/189 (45%), Gaps = 14/189 (7%)
Query: 112 EDCSQKQRVARTVIIGGLLNADMA-EEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGC 170
EDC + + RT +I L +M EE+ L SIG V S L ++++ H L
Sbjct: 11 EDC--RDDIGRTNLIVNYLPQNMTQEELRSLFSSIGEVESAK--LIRDKVAGHSLGY--- 63
Query: 171 KMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKV 230
V Y T K A +++ L+ ++ T+ + L I +P
Sbjct: 64 ----GFVNYVTAKDAERAISTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQ 119
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK--FGKRPI 288
+++DMFS G + N + + TGLS+G AF++F + +AE AI FNG K PI
Sbjct: 120 KDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPI 179
Query: 289 AVDWAVPKN 297
V +A N
Sbjct: 180 TVKFAANPN 188
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 113/305 (37%), Gaps = 41/305 (13%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
++ K + G+G+V + +DA RA+ NG + + I V +A R S E +
Sbjct: 51 LIRDKVAGHSLGYGFVNYVTAKDAERAISTLNGLRLQSKTIKVSYA--RPSSEVIKDA-- 106
Query: 61 QEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQRV 120
+ + +TM KD E S+ G+ + R L D Q +
Sbjct: 107 -NLYISGLPRTMTQKD-----VEDMFSRF---GRIINSRV-------LVD-----QTTGL 145
Query: 121 ARTVIIGGLLNADMAEEV------HRLAGSIGTVCSVTYPLPKEELEQHGLAQ---EGCK 171
+R V AEE H+ GS + P + L+Q +
Sbjct: 146 SRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNMALLSQLYHSPAR 205
Query: 172 MDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVN 231
V + + + + + H I G V G+ + W + I N+ A
Sbjct: 206 RFGGPVHHQAQRFRFSPMGVDHMSGISGVNV-------PGNASSGWCIFIYNLGQDADEG 258
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
+ MF P G V NV + + +T KGF FV T +A AI NG + G + + V
Sbjct: 259 ILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVS 318
Query: 292 WAVPK 296
+ K
Sbjct: 319 FKTNK 323
>gi|392562565|gb|EIW55745.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 985
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 130/331 (39%), Gaps = 98/331 (29%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVE--MKNGTSVGGRKIGVKHAMHRASLEQRRSK 58
+V ++G+ +G GYV FA+ EDA A++ K G ++ GR + V+ A +
Sbjct: 57 VVLEQGTGVSKGVGYVAFAIREDATMAIDKISKEGITLDGRGLRVQWAGSK--------- 107
Query: 59 VTQEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVK-PRKAATLGIDLADKEDCSQK 117
+KDG E G VK P K A L S
Sbjct: 108 -----------NIAQDKDG-------------EEGDEVKKPGKKAAPAPRLPRPAGPSDP 143
Query: 118 QRVARTVIIGGLLNA----DMAEEVHRLAGSIGTVCSVTYPLPKEE-LEQHGLAQEGCKM 172
+ RTV+I GL + ++V +L G+ V +P+ E E G+A
Sbjct: 144 VAI-RTVVIAGLPQGIDSKTLWKKVRKLQGA----EKVDWPVKSESGQEDPGIAH----- 193
Query: 173 DASAVLYTTVKSACASVALLHQKEIKGGTVWA---RQLGGEGSKTQKWK----------- 218
L+ T SA +V+ LH KG + A ++L G K K
Sbjct: 194 ----ALFNTPASANDAVSKLHAHVYKGSLLSATLKKRLDGLARSGMKPKTSAQASAQSKS 249
Query: 219 ---------LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGL------------- 256
LI+RN+PF +++ +F P G + +V+IP +
Sbjct: 250 GPAPNRNSRLIVRNLPFDITEQDLRSIFLPYGPIHSVHIPLDVKKEEAKEEEADEEEEGT 309
Query: 257 -------SKGFAFVKFTCKRDAESAIQKFNG 280
+KGFAF+ F ++DAE A++K NG
Sbjct: 310 SKPRPPRTKGFAFIWFLSRKDAEKAMEKCNG 340
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Query: 417 QTEGEDELQN-TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFK 475
Q EGE++ T+F+ NLP+ + ++K FS V S VL Q T KG G++ F
Sbjct: 16 QDEGEEKTHGATLFVSNLPYTATSTDLKTLFSDLAPVRSAFVVLEQGTGVSKGVGYVAFA 75
Query: 476 TVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDKE 517
E AT A+ S GI L GR L V A K +A DK+
Sbjct: 76 IREDATMAID---KISKEGITLDGRGLRVQWAGSKNIAQDKD 114
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 213 KTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAE 272
KT L + N+P+ A ++K +FS + V + ++ TG+SKG +V F + DA
Sbjct: 22 KTHGATLFVSNLPYTATSTDLKTLFSDLAPVRSAFVVLEQGTGVSKGVGYVAFAIREDAT 81
Query: 273 SAIQKFN--GQKFGKRPIAVDWAVPKNI 298
AI K + G R + V WA KNI
Sbjct: 82 MAIDKISKEGITLDGRGLRVQWAGSKNI 109
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
L +RN+PF+A +E++ +F G + I + TG S+G F F K DA+ AI++
Sbjct: 497 LFVRNVPFEATEDELRTLFRAFGPLRYARITMDGPTGRSRGTGFACFWNKEDADKAIEQ 555
>gi|330845010|ref|XP_003294397.1| hypothetical protein DICPUDRAFT_159387 [Dictyostelium purpureum]
gi|325075149|gb|EGC29077.1| hypothetical protein DICPUDRAFT_159387 [Dictyostelium purpureum]
Length = 823
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Query: 191 LLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPH 250
L QKE G V E + ++IIRN+ F + + D FS G + V +P
Sbjct: 173 LSKQKEYNGKKV---SFSIENDDFKSNEIIIRNLSFNTTIQNLIDKFSSYGELVLVKVPT 229
Query: 251 NTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIY 299
++ +KGFAF+ F+ K + + + NGQK R IA+DW + +N Y
Sbjct: 230 KPNSNTTKGFAFLTFSSKEVSAKVVAECNGQKINNRQIAIDWTLKQNDY 278
>gi|344247291|gb|EGW03395.1| ELAV-like protein 1 [Cricetulus griseus]
Length = 335
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 86/189 (45%), Gaps = 14/189 (7%)
Query: 112 EDCSQKQRVARTVIIGGLLNADMA-EEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGC 170
EDC + + RT +I L +M EE+ L SIG V S L ++++ H L
Sbjct: 3 EDC--RDDIGRTNLIVNYLPQNMTQEELRSLFSSIGEVESAK--LIRDKVAGHSLGY--- 55
Query: 171 KMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKV 230
V Y T K A +++ L+ ++ T+ + L I +P
Sbjct: 56 ----GFVNYVTAKDAERAISTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQ 111
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK--FGKRPI 288
+++DMFS G + N + + TGLS+G AF++F + +AE AI FNG K PI
Sbjct: 112 KDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPI 171
Query: 289 AVDWAVPKN 297
V +A N
Sbjct: 172 TVKFAANPN 180
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%)
Query: 211 GSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRD 270
G+ + W + I N+ A + MF P G V NV + + +T KGF FV T +
Sbjct: 247 GNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEE 306
Query: 271 AESAIQKFNGQKFGKRPIAVDWAVPK 296
A AI NG + G + + V + K
Sbjct: 307 AAMAIASLNGYRLGDKILQVSFKTNK 332
>gi|294951439|ref|XP_002786981.1| eukaryotic translation initiation factor 3 p42 subunit, putative
[Perkinsus marinus ATCC 50983]
gi|239901571|gb|EER18777.1| eukaryotic translation initiation factor 3 p42 subunit, putative
[Perkinsus marinus ATCC 50983]
Length = 287
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+ +++ +FS G V +Y+ N +TGLSKGFAFV + K+DAE A++K
Sbjct: 200 LRVSNLSEDVGDGDLQQLFSTAGRVQRIYLARNPETGLSKGFAFVTYYNKKDAEKALEKL 259
Query: 279 NGQKFGKRPIAVDWAVP 295
NG + + +DWA P
Sbjct: 260 NGHGYDNLILKLDWAKP 276
>gi|85111281|ref|XP_963862.1| hypothetical protein NCU03092 [Neurospora crassa OR74A]
gi|28925605|gb|EAA34626.1| predicted protein [Neurospora crassa OR74A]
Length = 428
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 48/79 (60%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+PF A + + D F+ V V ++ IP + ++G KGFA+V F DA++A ++
Sbjct: 286 LFVGNMPFSADESVVSDFFNSVASVASLRIPTDQESGRPKGFAYVTFNSVEDAKNAFEQL 345
Query: 279 NGQKFGKRPIAVDWAVPKN 297
NG RP+ +D+A P++
Sbjct: 346 NGSDLNGRPVRLDYAKPRD 364
Score = 42.4 bits (98), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 41/98 (41%), Gaps = 20/98 (20%)
Query: 383 GNKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEV 442
GNK QD K N +AK D S +T+F+ N+PF D V
Sbjct: 261 GNKPQD--KAANRAAKHGDTISPES------------------DTLFVGNMPFSADESVV 300
Query: 443 KQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAA 480
F++ V S Q + RPKG ++ F +VE A
Sbjct: 301 SDFFNSVASVASLRIPTDQESGRPKGFAYVTFNSVEDA 338
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRA 50
+VT + S RGFGYV FA E A +A + K+G + GR++ + A A
Sbjct: 211 VVTDRESGRSRGFGYVDFATNEQAQKAYDAKSGALLEGREMRLDFAAKDA 260
>gi|350296577|gb|EGZ77554.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 356
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 48/79 (60%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+PF A + + D F+ V V ++ IP + ++G KGFA+V F DA++A ++
Sbjct: 214 LFVGNMPFSADESVVSDFFNSVASVASLRIPTDQESGRPKGFAYVTFNSVEDAKNAFEQL 273
Query: 279 NGQKFGKRPIAVDWAVPKN 297
NG RP+ +D+A P++
Sbjct: 274 NGSDLNGRPVRLDYAKPRD 292
Score = 42.0 bits (97), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 20/101 (19%)
Query: 383 GNKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEV 442
GNK QD K N +AK D P+S +T+F+ N+PF D V
Sbjct: 189 GNKPQD--KAANRAAKHGDTIS-------PES-----------DTLFVGNMPFSADESVV 228
Query: 443 KQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAA 483
F++ V S Q + RPKG ++ F +VE A A
Sbjct: 229 SDFFNSVASVASLRIPTDQESGRPKGFAYVTFNSVEDAKNA 269
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRA 50
+VT + S RGFGYV FA E A +A + K+G + GR++ + A A
Sbjct: 139 VVTDRESGRSRGFGYVDFATNEQAQKAYDAKSGALLEGREMRLDFAAKDA 188
>gi|336464486|gb|EGO52726.1| hypothetical protein NEUTE1DRAFT_91358 [Neurospora tetrasperma FGSC
2508]
Length = 356
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 48/79 (60%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+PF A + + D F+ V V ++ IP + ++G KGFA+V F DA++A ++
Sbjct: 214 LFVGNMPFSADESVVSDFFNSVASVASLRIPTDQESGRPKGFAYVTFNSVEDAKNAFEQL 273
Query: 279 NGQKFGKRPIAVDWAVPKN 297
NG RP+ +D+A P++
Sbjct: 274 NGSDLNGRPVRLDYAKPRD 292
Score = 42.0 bits (97), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 20/101 (19%)
Query: 383 GNKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEV 442
GNK QD K N +AK D P+S +T+F+ N+PF D V
Sbjct: 189 GNKPQD--KAANRAAKHGDTIS-------PES-----------DTLFVGNMPFSADESVV 228
Query: 443 KQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAA 483
F++ V S Q + RPKG ++ F +VE A A
Sbjct: 229 SDFFNSVASVASLRIPTDQESGRPKGFAYVTFNSVEDAKNA 269
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRA 50
+VT + S RGFGYV FA E A +A + K+G + GR++ + A A
Sbjct: 139 VVTDRESGRSRGFGYVDFATNEQAQKAYDAKSGALLEGREMRLDFAAKDA 188
>gi|294881076|ref|XP_002769232.1| eukaryotic translation initiation factor 3 p42 subunit, putative
[Perkinsus marinus ATCC 50983]
gi|239872510|gb|EER01950.1| eukaryotic translation initiation factor 3 p42 subunit, putative
[Perkinsus marinus ATCC 50983]
Length = 287
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+ +++ +FS G V +Y+ N +TGLSKGFAFV + K+DAE A++K
Sbjct: 200 LRVSNLSEDVGDGDLQQLFSTAGRVQRIYLARNPETGLSKGFAFVTYYNKKDAEKALEKL 259
Query: 279 NGQKFGKRPIAVDWAVP 295
NG + + +DWA P
Sbjct: 260 NGHGYDNLILKLDWAKP 276
>gi|294956223|ref|XP_002788862.1| eukaryotic translation initiation factor 3 p42 subunit, putative
[Perkinsus marinus ATCC 50983]
gi|239904474|gb|EER20658.1| eukaryotic translation initiation factor 3 p42 subunit, putative
[Perkinsus marinus ATCC 50983]
Length = 283
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+ +++ +FS G V +Y+ N +TGLSKGFAFV + K+DAE A++K
Sbjct: 196 LRVSNLSEDVGDGDLQQLFSTAGRVQRIYLARNPETGLSKGFAFVTYYNKKDAEKALEKL 255
Query: 279 NGQKFGKRPIAVDWAVP 295
NG + + +DWA P
Sbjct: 256 NGHGYDNLILKLDWAKP 272
>gi|407850128|gb|EKG04639.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 477
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 52/87 (59%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L I NIP K + E++++F+P G + + + N TG S G AFV++ +A SAI+
Sbjct: 117 LFISNIPHKMEQRELENLFAPYGQILSAAVMRNIHTGKSLGTAFVRYASTEEAMSAIKGM 176
Query: 279 NGQKFGKRPIAVDWAVPKNIYSSGGAA 305
+G++ G R IAV WA ++ Y+ G A
Sbjct: 177 SGKRIGGRAIAVQWAKKQHDYAPVGEA 203
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 406 NSSKSKPKSLKQTEG---EDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQV 462
N + S+ L T G +++ + +FI N+P ++ E++ F+ +G+++S + +
Sbjct: 92 NDNTSRQDKLLLTRGFASDNQSRTNLFISNIPHKMEQRELENLFAPYGQILSAAVMRNIH 151
Query: 463 TKRPKGTGFLKFKTVEAATAAV 484
T + GT F+++ + E A +A+
Sbjct: 152 TGKSLGTAFVRYASTEEAMSAI 173
Score = 38.9 bits (89), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 19/154 (12%)
Query: 169 GCKMDASAVLYTTVKSACASVALLHQKEIKGGTV---WARQLG-----GEGSKTQKWKLI 220
G + + V Y + + A +++ + K I G + WA++ GE K + KL
Sbjct: 153 GKSLGTAFVRYASTEEAMSAIKGMSGKRIGGRAIAVQWAKKQHDYAPVGEARK-KISKLF 211
Query: 221 IRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKG----FAFVKFTCKRDAESAIQ 276
+RNIP ++DMFS G V +V I +T K AF+ F AE A +
Sbjct: 212 VRNIPLDINTVVLEDMFSMYGPVKSVSIHKDTAPDCEKNSERHIAFITFLADGAAERAAE 271
Query: 277 KF-NGQKF---GKRPIAVDWA--VPKNIYSSGGA 304
N + F GK P+ V A P+ I+ G+
Sbjct: 272 AVHNTRPFPSCGKVPLMVKLAEDAPQRIHHGTGS 305
>gi|71652518|ref|XP_814914.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70879928|gb|EAN93063.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 477
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 52/87 (59%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L I NIP K + E++++F+P G + + + N TG S G AFV++ +A SAI+
Sbjct: 117 LFISNIPHKMEQRELENLFAPYGQILSAAVMRNIHTGKSLGTAFVRYASTEEAMSAIKGM 176
Query: 279 NGQKFGKRPIAVDWAVPKNIYSSGGAA 305
+G++ G R IAV WA ++ Y+ G A
Sbjct: 177 SGKRIGGRAIAVQWAKKQHDYAPVGEA 203
Score = 38.9 bits (89), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 406 NSSKSKPKSLKQTEG---EDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQV 462
N + S+ L T G +++ + +FI N+P ++ E++ F+ +G+++S + +
Sbjct: 92 NDNTSRRDKLLLTRGFASDNQSRTNLFISNIPHKMEQRELENLFAPYGQILSAAVMRNIH 151
Query: 463 TKRPKGTGFLKFKTVEAATAAV 484
T + GT F+++ + E A +A+
Sbjct: 152 TGKSLGTAFVRYASTEEAMSAI 173
>gi|308160215|gb|EFO62713.1| RNA binding protein, putative [Giardia lamblia P15]
Length = 1027
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 50/216 (23%)
Query: 490 TSGLGIFLKGRQLTVLKALDKKLAHDKEIDKS-KNETNDHRNLYLAKEGLILEGTPAAEG 548
T+GL + + G LT+ A++++ E +S K + D RNL L++ GL++ P +G
Sbjct: 710 TNGL-LVINGSPLTLKPAIERQQLKTIEKHRSEKTDAEDPRNLSLSRIGLLI---PGIDG 765
Query: 549 VSDDDMSKRQMLHEKKMTK-----LQSPNFHVSRTRLVIYNLPKSMTEKGLKKL------ 597
S D+ + K K + + + H+SRTR+VI N+PK E+ + +
Sbjct: 766 FSKADVPPEDVRKRIKYWKTLKGLMTNQSIHISRTRIVIRNIPKEFDERKISWIVIRSFG 825
Query: 598 -------------------------------CIDAVVSRASKQKPVIKQIKFLQSLKKGK 626
C + R +K ++K + + + ++G
Sbjct: 826 RINESEARAMFNPNDKNYEYKVLMRLLKSVGCTEMRFRRGTKAYNLVKSMDDVYN-EEGY 884
Query: 627 VDTKHYSRGVAFVEFTEHQHALVALRVLNNNPSKLF 662
+D +H G FVEFT H+ AL L LNNNP +
Sbjct: 885 MDNQH--SGFCFVEFTSHESALRCLLALNNNPRSFY 918
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 132/339 (38%), Gaps = 54/339 (15%)
Query: 211 GSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSK--GFAFVKFTCK 268
G+ + +I+RN+PF N I ++ V + +P T +G ++ GFAF+
Sbjct: 231 GASPRMTTVILRNLPFTIYANTIFEVVKDKYPVIELRLPSRTISGRTQGSGFAFLVLATH 290
Query: 269 RDAESAIQKFNGQKFGKRPIAVDWAVPKNIY---------SSGGAAAGVQNKGDGNSDSG 319
DA + + + I +DW + KN + ++G +++ S+SG
Sbjct: 291 SDAVALVSSVKLRVLHHTSI-LDWGLDKNTFERQQQVIARAAGDTVDDTEDRSRSVSESG 349
Query: 320 SDDDLGDDDAETASDDSNSSEKED----LPSNADFDEEVDIARKVLNKLTSTTGSLPSLS 375
S+ + D + + + S+ ED +D + ++ + +P+
Sbjct: 350 SNSESDDTNYSYSGVSHSDSDTEDNAFSSADASDNEPSFELYEDGKTIIKPFVREVPTKE 409
Query: 376 DDSALVKGNKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGE----------DELQ 425
D NKEQ D+ N S+ ++S+L ++ K + + E +E++
Sbjct: 410 QDEPSYDPNKEQAYDEDPNVSSDTDNLSELLDNEIKQRDAQNEAPEIKSDGTKDQQEEIE 469
Query: 426 NTIFICNLPFDLD----------------------------NEEVKQRFSAFGEVVSFVP 457
TIF+ NLP + E+++ FSAFG V
Sbjct: 470 RTIFVTNLPSRVTAARMAEAEKVLMAKNANCRPQDILVSGLRYELRRLFSAFGMVRDVSI 529
Query: 458 VLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIF 496
V+++ R G+ F+ FK AA A+ + F
Sbjct: 530 VVNKTLDRHTGSAFIIFKKRGAALCAMEYYNSLKNQAFF 568
>gi|320168309|gb|EFW45208.1| RNA binding domain-containing protein [Capsaspora owczarzaki ATCC
30864]
Length = 1179
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KLI+RN+PF+A E+ D+FSP G + +V +P G +GFAF++F K +A+ A +
Sbjct: 1064 KLIVRNVPFEATRKELFDVFSPFGQLKSVRLPQKPG-GQHRGFAFIEFLTKEEAKKAFES 1122
Query: 278 FNGQKFGKRPIAVDWAV 294
F R + ++WA
Sbjct: 1123 LKATHFYGRHLVLEWAA 1139
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
++++NIPF A +E++ +F+ G + +P ++ A V+F +A SA +
Sbjct: 820 ILVKNIPFSATEDELRPLFAKHGELKRFALPS------TRALAVVEFAQPSEARSAFRNL 873
Query: 279 NGQKFGKRPIAVDWAVPKNIYSSGGAAAG 307
KF + PI ++WA + S+ AA
Sbjct: 874 AYSKFKQVPIYLEWAPVSTVLSAPTKAAA 902
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%)
Query: 209 GEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCK 268
G S + +L +RN+P+ +++ +FS G + V++P + +T GFAFV F
Sbjct: 599 GSVSIAESGRLFVRNLPYTCTEDDLIALFSKFGQLAEVHMPIDKETKKPTGFAFVLFLMP 658
Query: 269 RDAESAIQKFNGQKFGKR 286
A +A + +G F R
Sbjct: 659 EHAVTAFRALDGSTFQGR 676
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 2 VTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKV 59
+ +K +HRGF +++F E+A +A E T GR + ++ A AS+EQ R K
Sbjct: 1094 LPQKPGGQHRGFAFIEFLTKEEAKKAFESLKATHFYGRHLVLEWAAEDASVEQMREKT 1151
>gi|325179763|emb|CCA14166.1| splicing factor putative [Albugo laibachii Nc14]
Length = 207
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L+IRNI + + +E++ F G V +VYIP + T KGFAFV+F +RDAE A++
Sbjct: 9 LLIRNISRRMRSDELRKTFEEFGDVRDVYIPRDFHTREVKGFAFVEFKNERDAEEALRNL 68
Query: 279 NGQKFGKRPIAVDWAVPK 296
+G + R I V +A K
Sbjct: 69 DGSRLDGREITVVFAQEK 86
>gi|1022961|gb|AAB41913.1| HuR RNA binding protein [Homo sapiens]
Length = 326
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 86/189 (45%), Gaps = 14/189 (7%)
Query: 112 EDCSQKQRVARTVIIGGLLNADMAE-EVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGC 170
EDC + + RT +I L +M + E+ L SIG V S L ++++ H L
Sbjct: 11 EDC--RGDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAK--LIRDKVAGHSLGY--- 63
Query: 171 KMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKV 230
V Y T K A ++ L+ ++ T+ + L I +P
Sbjct: 64 ----GFVNYVTAKDAERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQ 119
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK--FGKRPI 288
+++DMFS G + N + + TGLS+G AF++F + +AE AI FNG K PI
Sbjct: 120 KDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPI 179
Query: 289 AVDWAVPKN 297
AV +A N
Sbjct: 180 AVKFAANPN 188
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 113/305 (37%), Gaps = 41/305 (13%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
++ K + G+G+V + +DA RA+ NG + + I V +A R S E +
Sbjct: 51 LIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRLQSKTIKVSYA--RPSSEVIKDA-- 106
Query: 61 QEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQRV 120
+ + +TM KD E S+ G+ + R L D Q +
Sbjct: 107 -NLYISGLPRTMTQKD-----VEDMFSRF---GRIINSRV-------LVD-----QTTGL 145
Query: 121 ARTVIIGGLLNADMAEEV------HRLAGSIGTVCSVTYPLPKEELEQHGLAQ---EGCK 171
+R V AEE H+ GS + P + L+Q +
Sbjct: 146 SRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPIAVKFAANPNQNKNVALLSQLYHSPAR 205
Query: 172 MDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVN 231
V + + + + + H + G V G+ + W + I N+ A
Sbjct: 206 RFGGPVHHQAQRFRFSPMGVDHMSGLSGVNV-------PGNASSGWCIFIYNLGQDADEG 258
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
+ MF P G V NV + + +T KGF FV T +A AI NG + G + + V
Sbjct: 259 ILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVS 318
Query: 292 WAVPK 296
+ K
Sbjct: 319 FKTNK 323
>gi|297632376|ref|NP_001172077.1| ELAV-like protein 1 [Oryctolagus cuniculus]
gi|296399062|gb|ADH10369.1| embryonic lethal abnormal vision-like 1 protein [Oryctolagus
cuniculus]
Length = 326
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 85/189 (44%), Gaps = 14/189 (7%)
Query: 112 EDCSQKQRVARTVIIGGLLNADMA-EEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGC 170
EDC + + RT +I L +M EE+ L SIG V S L ++++ H L
Sbjct: 11 EDC--RDDIGRTNLIVNYLPQNMTQEELRSLFSSIGEVESAK--LIRDKVAGHSLGY--- 63
Query: 171 KMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKV 230
V Y T K A ++ L+ ++ T+ + L I +P
Sbjct: 64 ----GFVNYVTAKDAEKAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQ 119
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK--FGKRPI 288
+++DMFS G + N + + TGLS+G AF++F + +AE AI FNG K PI
Sbjct: 120 KDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPI 179
Query: 289 AVDWAVPKN 297
V +A N
Sbjct: 180 TVKFAANPN 188
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%)
Query: 211 GSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRD 270
G+ + W + I N+ A + MF P G V NV + + +T KGF FV T +
Sbjct: 238 GNASSGWCIFIYNLGQDAHEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEE 297
Query: 271 AESAIQKFNGQKFGKRPIAVDWAVPK 296
A AI NG + G + + V + K
Sbjct: 298 AAMAIASLNGYRLGDKILQVSFKTNK 323
>gi|12850171|dbj|BAB28620.1| unnamed protein product [Mus musculus]
Length = 233
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+LIIRN+ FK +++K +F+ G V V IP D G +GFAFV+F +A A++
Sbjct: 115 RLIIRNLSFKCSEDDLKAVFTHYGTVLEVNIPKKPD-GKMRGFAFVQFKNLLEAGKALKG 173
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSG--GAAAGVQNKGD 313
N ++ R +AVDWAV K+ Y +A GV+ D
Sbjct: 174 ANMKEIKGRTVAVDWAVAKDKYKDAQHASAPGVKKSSD 211
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV---KHAMHRASLEQRRS 57
+VT+KGS RGFGYV F+++ED RA +K T+ G KI V K + S E R++
Sbjct: 35 VVTEKGSKACRGFGYVTFSMLEDVQRA--LKEITTFEGCKIDVTVAKKKLRNKSKETRKN 92
>gi|255584869|ref|XP_002533150.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223527045|gb|EEF29231.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 265
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L++RNIP + E++ F G+V +VYIP + TG +GFAFV+F DA A +
Sbjct: 45 LLVRNIPLDCRPEELRAPFERFGVVRDVYIPKDYYTGEPRGFAFVQFVDTYDAMEAQHRM 104
Query: 279 NGQKFGKRPIAV 290
NGQ F R I+V
Sbjct: 105 NGQIFAGREISV 116
>gi|330928516|ref|XP_003302299.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
gi|311322459|gb|EFQ89618.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
Length = 403
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 48/78 (61%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+ F+ I+++F+ G + V +P + DTG KGF +V F+ +++A +A++
Sbjct: 321 LFLGNVSFECSNESIQEVFAEYGSITRVSLPTDRDTGALKGFGYVDFSSQQEATAALEAL 380
Query: 279 NGQKFGKRPIAVDWAVPK 296
NGQ G R I +D+A P+
Sbjct: 381 NGQDIGGRAIRIDYATPR 398
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHR 49
+ T + + +GFGYV F+ ++A A+E NG +GGR I + +A R
Sbjct: 350 LPTDRDTGALKGFGYVDFSSQQEATAALEALNGQDIGGRAIRIDYATPR 398
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
NT+F+ N+ F+ NE +++ F+ +G + + T KG G++ F + + ATAA+
Sbjct: 319 NTLFLGNVSFECSNESIQEVFAEYGSITRVSLPTDRDTGALKGFGYVDFSSQQEATAALE 378
Query: 486 A 486
A
Sbjct: 379 A 379
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 413 KSLKQTE--GEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTG 470
K K E E+ ++N +F+ N+ +++D + +++ F FGE+V + + T R KG G
Sbjct: 203 KKSKVEEPAAEEGIKN-LFVGNMSWNIDEDWLRREFEGFGEIVGCRVITDRETGRAKGFG 261
Query: 471 FLKFKTVEAATAAVSASKTTSGLGIF-LKGRQLTV 504
+++F + A A+K + + L GRQL V
Sbjct: 262 YVEF------SNAADAAKAQKEMHEYELDGRQLNV 290
>gi|268531322|ref|XP_002630787.1| Hypothetical protein CBG02484 [Caenorhabditis briggsae]
Length = 403
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 85/185 (45%), Gaps = 26/185 (14%)
Query: 122 RTVIIGGLLNADMAEEVHRLAGSIGTVCSVTY-------PLPKEELEQHGLAQEGCKMDA 174
RT+ +G L + + + L IG+V P E HG A
Sbjct: 42 RTLYVGNLDPSVSEDFIATLFNQIGSVTKTKVIHDGANDPYAFVEFSDHG--------QA 93
Query: 175 SAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSK---TQKWKLIIRNIPFKAKVN 231
S L T K LLH +E+K WA + G + SK T+ + + + ++ +
Sbjct: 94 SQALQTMNKR------LLHDREMK--VNWAVEPGQQPSKIDTTRHFHVFVGDLSSEVDNQ 145
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
++++ F P G V + + +T+T SKG+ FV + + +AE AI++ NGQ G+R I +
Sbjct: 146 KLREAFIPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTN 205
Query: 292 WAVPK 296
WA K
Sbjct: 206 WATRK 210
>gi|417409800|gb|JAA51391.1| Putative rna-binding protein elav/hu rrm superfamily, partial
[Desmodus rotundus]
Length = 336
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 85/189 (44%), Gaps = 14/189 (7%)
Query: 112 EDCSQKQRVARTVIIGGLLNADMAE-EVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGC 170
EDC + + RT +I L +M + E+ L SIG V S L ++++ H L
Sbjct: 21 EDC--RDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAK--LIRDKVAGHSLGY--- 73
Query: 171 KMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKV 230
V Y T K A +V L+ ++ T+ + L I +P
Sbjct: 74 ----GFVNYVTAKDAERAVNTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRNMTQ 129
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK--FGKRPI 288
+++DMFS G + N + + TGLS+G AF++F + +AE AI FNG K PI
Sbjct: 130 KDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPI 189
Query: 289 AVDWAVPKN 297
V +A N
Sbjct: 190 TVKFAANPN 198
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 114/305 (37%), Gaps = 41/305 (13%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRR---- 56
++ K + G+G+V + +DA RAV NG + + I V +A R S E +
Sbjct: 61 LIRDKVAGHSLGYGFVNYVTAKDAERAVNTLNGLRLQSKTIKVSYA--RPSSEVIKDANL 118
Query: 57 --SKVTQEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDC 114
S + + + +D+E +I+ S++L T R A + D
Sbjct: 119 YISGLPRNMTQKDVEDMFSRFGRIIN------SRVLVDQTTGLSRGVAFIRFD------- 165
Query: 115 SQKQRVARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQ---EGCK 171
K+ A I N H+ GS + P + L+Q +
Sbjct: 166 --KRSEAEEAITS--FNG------HKPPGSSEPITVKFAANPNQNKNMALLSQLYHSPAR 215
Query: 172 MDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVN 231
V + + + + + H + G V G+ + W + I N+ A
Sbjct: 216 RFGGPVHHQAQRFRFSPMGVDHMSGLSGVNV-------PGNASSGWCIFIYNLGQDADEG 268
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
+ MF P G V NV + + +T KGF FV T +A AI NG + G + + V
Sbjct: 269 ILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVS 328
Query: 292 WAVPK 296
+ K
Sbjct: 329 FKTNK 333
>gi|46249455|gb|AAH68622.1| LOC414671 protein, partial [Xenopus laevis]
Length = 323
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 215 QKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESA 274
+K +LIIRN+ F+ +++K FS G V V IP D G +GFAFV+ +A A
Sbjct: 112 KKARLIIRNLSFQCSEDDLKKHFSNFGSVLEVNIPKKPD-GKMRGFAFVQLKNMLEASKA 170
Query: 275 IQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAA 306
++ N + R +AVDWAV K+ Y++ AA
Sbjct: 171 LKGTNMKSIKGRTVAVDWAVAKDKYTATQEAA 202
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHA 46
+V +KG+ + RGFGYV F+++EDA RA MK GRKI V+ A
Sbjct: 35 VVREKGAEKCRGFGYVTFSMVEDAQRA--MKEIKEYEGRKIEVQVA 78
>gi|395513446|ref|XP_003760935.1| PREDICTED: ELAV-like protein 1 [Sarcophilus harrisii]
Length = 374
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 14/189 (7%)
Query: 112 EDCSQKQRVARTVIIGGLLNADMAE-EVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGC 170
EDC + + RT +I L +M + E+ L SIG V S L ++++ H L
Sbjct: 59 EDC--RDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAK--LIRDKVAGHSLGY--- 111
Query: 171 KMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKV 230
V Y T K A ++ L+ ++ T+ + L I +P
Sbjct: 112 ----GFVNYVTAKDAERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQ 167
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK--FGKRPI 288
+++DMFS G + N + + TGLS+G AF++F + +AE AI FNG K PI
Sbjct: 168 KDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPI 227
Query: 289 AVDWAVPKN 297
V +A N
Sbjct: 228 TVKFAANPN 236
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%)
Query: 211 GSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRD 270
G+ + W + I N+ A + MF P G V NV + + +T KGF FV T +
Sbjct: 286 GNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEE 345
Query: 271 AESAIQKFNGQKFGKRPIAVDWAVPK 296
A AI NG + G + + V + K
Sbjct: 346 AAMAIASLNGYRLGDKILQVSFKTNK 371
>gi|380091978|emb|CCC10246.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 456
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+PF A + + D F+ V V ++ IP + ++G KGFA+V F DA++A +
Sbjct: 273 LFVGNMPFTADESAVSDFFNSVASVASLRIPTDQESGRPKGFAYVTFNSIEDAKNAFDQL 332
Query: 279 NGQKFGKRPIAVDWAVPKN 297
NG RP+ +D+A P++
Sbjct: 333 NGSDLQGRPVRLDYAKPRD 351
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAA 483
+T+F+ N+PF D V F++ V S Q + RPKG ++ F ++E A A
Sbjct: 271 DTLFVGNMPFTADESAVSDFFNSVASVASLRIPTDQESGRPKGFAYVTFNSIEDAKNA 328
>gi|336267120|ref|XP_003348326.1| hypothetical protein SMAC_02824 [Sordaria macrospora k-hell]
Length = 377
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+PF A + + D F+ V V ++ IP + ++G KGFA+V F DA++A +
Sbjct: 273 LFVGNMPFTADESAVSDFFNSVASVASLRIPTDQESGRPKGFAYVTFNSIEDAKNAFDQL 332
Query: 279 NGQKFGKRPIAVDWAVPKN 297
NG RP+ +D+A P++
Sbjct: 333 NGSDLQGRPVRLDYAKPRD 351
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAA 483
+T+F+ N+PF D V F++ V S Q + RPKG ++ F ++E A A
Sbjct: 271 DTLFVGNMPFTADESAVSDFFNSVASVASLRIPTDQESGRPKGFAYVTFNSIEDAKNA 328
>gi|149716413|ref|XP_001497933.1| PREDICTED: ELAV-like protein 1 [Equus caballus]
Length = 326
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 85/189 (44%), Gaps = 14/189 (7%)
Query: 112 EDCSQKQRVARTVIIGGLLNADMAE-EVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGC 170
EDC + + RT +I L +M + E+ L SIG V S L ++++ H L
Sbjct: 11 EDC--RDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAK--LIRDKVAGHSLGY--- 63
Query: 171 KMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKV 230
V Y T K A +V L+ ++ T+ + L I +P
Sbjct: 64 ----GFVNYVTAKDAERAVNTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQ 119
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK--FGKRPI 288
+++DMFS G + N + + TGLS+G AF++F + +AE AI FNG K PI
Sbjct: 120 KDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPI 179
Query: 289 AVDWAVPKN 297
V +A N
Sbjct: 180 TVKFAANPN 188
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 113/305 (37%), Gaps = 41/305 (13%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
++ K + G+G+V + +DA RAV NG + + I V +A R S E +
Sbjct: 51 LIRDKVAGHSLGYGFVNYVTAKDAERAVNTLNGLRLQSKTIKVSYA--RPSSEVIKDA-- 106
Query: 61 QEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQRV 120
+ + +TM KD E S+ G+ + R L D Q +
Sbjct: 107 -NLYISGLPRTMTQKD-----VEDMFSRF---GRIINSRV-------LVD-----QTTGL 145
Query: 121 ARTVIIGGLLNADMAEEV------HRLAGSIGTVCSVTYPLPKEELEQHGLAQ---EGCK 171
+R V AEE H+ GS + P + L+Q +
Sbjct: 146 SRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNVALLSQLYHSPAR 205
Query: 172 MDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVN 231
V + + + + + H + G V G+ + W + I N+ A
Sbjct: 206 RFGGPVHHQAQRFRFSPMGVDHMSGLSGVNV-------PGNASSGWCIFIYNLGQDADEG 258
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
+ MF P G V NV + + +T KGF FV T +A AI NG + G + + V
Sbjct: 259 ILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVS 318
Query: 292 WAVPK 296
+ K
Sbjct: 319 FKTNK 323
>gi|224112763|ref|XP_002316285.1| predicted protein [Populus trichocarpa]
gi|222865325|gb|EEF02456.1| predicted protein [Populus trichocarpa]
Length = 232
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L++RNIP + +E++ F G+V +VYIP + TG +GFAFV+F +A A +
Sbjct: 8 LLVRNIPLDCRPDELRGPFERFGVVRDVYIPKDYYTGEPRGFAFVQFVDPYEAMEAQHRM 67
Query: 279 NGQKFGKRPIAV 290
NGQ F R I+V
Sbjct: 68 NGQIFAGRQISV 79
>gi|115497832|ref|NP_001069922.1| ELAV-like protein 1 [Bos taurus]
gi|261244966|ref|NP_001159666.1| ELAV-like protein 1 [Ovis aries]
gi|73587279|gb|AAI02496.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [Bos taurus]
gi|256665397|gb|ACV04844.1| ELAV-like protein 1 [Ovis aries]
gi|296485836|tpg|DAA27951.1| TPA: ELAV-like 1 (Hu antigen R) [Bos taurus]
Length = 326
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 14/189 (7%)
Query: 112 EDCSQKQRVARTVIIGGLLNADMAE-EVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGC 170
EDC + + RT +I L +M + E+ L SIG V S L ++++ H L
Sbjct: 11 EDC--RDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAK--LIRDKVAGHSLGY--- 63
Query: 171 KMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKV 230
V Y T K A ++ L+ ++ T+ + L I +P
Sbjct: 64 ----GFVNYVTAKDAERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRNMTQ 119
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK--FGKRPI 288
+++DMFS G + N + + TGLS+G AF++F + +AE AI FNG K PI
Sbjct: 120 KDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPI 179
Query: 289 AVDWAVPKN 297
V +A N
Sbjct: 180 TVKFAANPN 188
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%)
Query: 211 GSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRD 270
G+ + W + I N+ A + MF P G V NV + + +T KGF FV T +
Sbjct: 238 GNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEE 297
Query: 271 AESAIQKFNGQKFGKRPIAVDWAVPK 296
A AI NG + G + + V + K
Sbjct: 298 AAMAIASLNGYRLGDKILQVSFKTNK 323
>gi|74198338|dbj|BAB31653.3| unnamed protein product [Mus musculus]
Length = 243
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+LIIRN+ FK +++K +F+ G V V IP D G +GFAFV+F +A A++
Sbjct: 115 RLIIRNLSFKCSEDDLKAVFTHYGTVLEVNIPKKPD-GKMRGFAFVQFKNLLEAGKALKG 173
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSG--GAAAGVQNKGD 313
N ++ R +AVDWAV K+ Y +A GV+ D
Sbjct: 174 ANMKEIKGRTVAVDWAVAKDKYKDAQHASAPGVKKSSD 211
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV---KHAMHRASLEQRRS 57
+VT+KGS RGFGYV F+++ED RA +K T+ G KI V K + S E R++
Sbjct: 35 VVTEKGSKACRGFGYVTFSMLEDVQRA--LKEITTFEGCKIDVTVAKKKLRNKSKETRKN 92
>gi|410950299|ref|XP_003981845.1| PREDICTED: ELAV-like protein 1 [Felis catus]
Length = 336
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 14/189 (7%)
Query: 112 EDCSQKQRVARTVIIGGLLNADMAE-EVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGC 170
EDC + + RT +I L +M + E+ L SIG V S L ++++ H L
Sbjct: 21 EDC--RDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAK--LIRDKVAGHSLGY--- 73
Query: 171 KMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKV 230
V Y T K A ++ L+ ++ T+ + L I +P
Sbjct: 74 ----GFVNYVTAKDAERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQ 129
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK--FGKRPI 288
+++DMFS G + N + + TGLS+G AF++F + +AE AI FNG K PI
Sbjct: 130 KDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPI 189
Query: 289 AVDWAVPKN 297
V +A N
Sbjct: 190 TVKFAANPN 198
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 112/305 (36%), Gaps = 41/305 (13%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
++ K + G+G+V + +DA RA+ NG + + I V +A R S E +
Sbjct: 61 LIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRLQSKTIKVSYA--RPSSEVIKDA-- 116
Query: 61 QEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQRV 120
+ + +TM KD E S+ G+ + R L D Q +
Sbjct: 117 -NLYISGLPRTMTQKD-----VEDMFSRF---GRIINSRV-------LVD-----QTTGL 155
Query: 121 ARTVIIGGLLNADMAEEV------HRLAGSIGTVCSVTYPLPKEELEQHGLAQ---EGCK 171
+R V AEE H+ GS + P + L+Q +
Sbjct: 156 SRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNMALLSQLYHSPAR 215
Query: 172 MDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVN 231
V + + + + + H + G V + G W + I N+ A
Sbjct: 216 RFGGPVHHQAQRFRFSPMGVDHMSGLSGVNVPSNASSG-------WCIFIYNLGQDADEG 268
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
+ MF P G V NV + + +T KGF FV T +A AI NG + G + + V
Sbjct: 269 ILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVS 328
Query: 292 WAVPK 296
+ K
Sbjct: 329 FKTNK 333
>gi|351701320|gb|EHB04239.1| ELAV-like protein 1, partial [Heterocephalus glaber]
Length = 329
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 14/189 (7%)
Query: 112 EDCSQKQRVARTVIIGGLLNADMAE-EVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGC 170
EDC + + RT +I L +M + E+ L SIG V S L ++++ H L
Sbjct: 14 EDC--RDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAK--LIRDKVAGHSLGY--- 66
Query: 171 KMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKV 230
V Y T K A ++ L+ ++ T+ + L I +P
Sbjct: 67 ----GFVNYVTAKDAERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQ 122
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK--FGKRPI 288
+++DMFS G + N + + TGLS+G AF++F + +AE AI FNG K PI
Sbjct: 123 KDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPI 182
Query: 289 AVDWAVPKN 297
V +A N
Sbjct: 183 TVKFAANPN 191
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 113/305 (37%), Gaps = 41/305 (13%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
++ K + G+G+V + +DA RA+ NG + + I V +A R S E +
Sbjct: 54 LIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRLQSKTIKVSYA--RPSSEVIKDA-- 109
Query: 61 QEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQRV 120
+ + +TM KD E S+ G+ + R L D Q +
Sbjct: 110 -NLYISGLPRTMTQKD-----VEDMFSRF---GRIINSRV-------LVD-----QTTGL 148
Query: 121 ARTVIIGGLLNADMAEEV------HRLAGSIGTVCSVTYPLPKEELEQHGLAQ---EGCK 171
+R V AEE H+ GS + P + L+Q +
Sbjct: 149 SRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNVALLSQLYHSPAR 208
Query: 172 MDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVN 231
V + + + + + H + G V G+ + W + I N+ A
Sbjct: 209 RFGGPVHHQAQRFRFSPMGVDHMSGLSGVNV-------PGNASSGWCIFIYNLGQDADEG 261
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
+ MF P G V NV + + +T KGF FV T +A AI NG + G + + V
Sbjct: 262 ILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVS 321
Query: 292 WAVPK 296
+ K
Sbjct: 322 FKTNK 326
>gi|224087249|ref|XP_002190976.1| PREDICTED: ELAV-like protein 1-like [Taeniopygia guttata]
gi|449266784|gb|EMC77794.1| ELAV-like protein 1 [Columba livia]
Length = 326
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 14/189 (7%)
Query: 112 EDCSQKQRVARTVIIGGLLNADMAE-EVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGC 170
EDC + + RT +I L +M + E+ L SIG V S L ++++ H L
Sbjct: 11 EDC--RDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAK--LIRDKVAGHSLGY--- 63
Query: 171 KMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKV 230
V Y T K A ++ L+ ++ T+ + L I +P
Sbjct: 64 ----GFVNYVTAKDAERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRSMTQ 119
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK--FGKRPI 288
+++DMFS G + N + + TGLS+G AF++F + +AE AI FNG K PI
Sbjct: 120 KDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITNFNGHKPPGSSEPI 179
Query: 289 AVDWAVPKN 297
V +A N
Sbjct: 180 TVKFAANPN 188
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 117/306 (38%), Gaps = 43/306 (14%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRR---- 56
++ K + G+G+V + +DA RA+ NG + + I V +A R S E +
Sbjct: 51 LIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRLQSKTIKVSYA--RPSSEVIKDANL 108
Query: 57 --SKVTQEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDC 114
S + + + +D+E +I+ S++L T R A + D
Sbjct: 109 YISGLPRSMTQKDVEDMFSRFGRIIN------SRVLVDQTTGLSRGVAFIRFD------- 155
Query: 115 SQKQRVARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDA 174
K+ A I N H+ GS + +V + + + L + C A
Sbjct: 156 --KRSEAEEAITN--FNG------HKPPGSSEPI-TVKFAANPNQNKNVALLSQLCHSPA 204
Query: 175 ----SAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKV 230
V + + + + + H + G V G+ + W + I N+ A
Sbjct: 205 RRFGGPVHHQAQRFRFSPMGVDHMSGLSGVNV-------PGNASSGWCIFIYNLGQDADE 257
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAV 290
+ MF P G V NV + + +T KGF FV T +A AI NG + G + + V
Sbjct: 258 GILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQV 317
Query: 291 DWAVPK 296
+ K
Sbjct: 318 SFKTNK 323
>gi|328850075|gb|EGF99245.1| hypothetical protein MELLADRAFT_79511 [Melampsora larici-populina
98AG31]
Length = 834
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 117/271 (43%), Gaps = 58/271 (21%)
Query: 440 EEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFL-------KFKTVEAA------------ 480
+E+ F +FG + V+ T+R +GTGF+ FK +E +
Sbjct: 409 DELYNIFRSFGPLNYARIVMDSKTQRSRGTGFVCMKNQVDGFKVLEISKGLEHQGLGQGP 468
Query: 481 -----TAAVSASKTTSGLG--IFLKGRQLTVLKALDKKLAHDKEIDK-SKNETNDHRNLY 532
++ +SGL + L GR L V +A+ K A I++ K D RNLY
Sbjct: 469 LAANGLPSLLQPDPSSGLATQLSLHGRVLGVSEAVTKNEAERLRIERDQKGVGKDKRNLY 528
Query: 533 LAKEGLILEGTPAAEGVSDD-DMSKRQMLHEKKMTKLQSP-NFHVSRTRLVIYNLPKSMT 590
L KEGL+L T + D D+ RQ +++ + L++ + ++S+TRL I +P ++
Sbjct: 529 LMKEGLVLPSTTSQSDQFDPMDLKARQASFDERKSLLRTNLSLYISKTRLSIRQIPTYVS 588
Query: 591 EKGLKKLCIDAV------------------------VSRASKQKPVIKQIKFLQSLKKGK 626
+ LK+L A+ + + ++ IKQ+K +
Sbjct: 589 NRSLKRLARYALNEWRTEVKMKRREELSGEELEPKSLEKKDEKASKIKQVKVIID----- 643
Query: 627 VDTKHYSRGVAFVEFTEHQHALVALRVLNNN 657
D K S+G F+E H AL +R +N N
Sbjct: 644 PDNKGKSKGYGFIEVFSHSDALRIVRYVNEN 674
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 127/325 (39%), Gaps = 59/325 (18%)
Query: 7 SNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT------ 60
S +H+ GY+++ + DA A+++ G K + A R S+++RR +
Sbjct: 60 SKDHQ-IGYIRYVLRSDAENAIKL--GFDSSSFKPSITWAKPRPSMKERRQNLIINEDSN 116
Query: 61 -----------QEVQAEDIEKTMDNKDGVISGA--EKHSSKLLESGKTVKPRKAATLGID 107
Q+ E +K +N+ S +K ++ +T ++ ID
Sbjct: 117 PDQLESNETPIQDTLTETFKKPQENQIQQTSTEPFKKPKENQIQQTETRHDPSHSSNPID 176
Query: 108 L---ADKEDCSQKQR-------VARTVIIGGL-------------LNADMAEEVHRLAGS 144
L ++ + Q Q RTV++ GL M + +++ A
Sbjct: 177 LNLPSNPKPNHQPQTSYKRDPTANRTVVLQGLPLPPTNSPKETQAYEQSMIKALYKRARK 236
Query: 145 IGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVLY--TTVKSACASVALLHQKEIKGGTV 202
+G SV YP P L +Q A Y T C LH KG +
Sbjct: 237 LGQPESVIYPAP---LPFTKTSQIPSTAYAHLTFYDPTMASRVCQR---LHLHLFKGSLI 290
Query: 203 W----ARQLGGE--GSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGL 256
+R + G K +LIIRN+ F+ ++++ F G + ++ +P +
Sbjct: 291 TTCLKSRFMSNSRLGPKHSGGRLIIRNLSFEITEDDLRYTFGKFGQIQSIELPKDPIHQK 350
Query: 257 SKGFAFVKFTCKRDAESAIQKFNGQ 281
+KGF FV DAE+A++ NGQ
Sbjct: 351 TKGFGFVWMVNYIDAENAMKALNGQ 375
>gi|449524006|ref|XP_004169014.1| PREDICTED: uncharacterized protein LOC101227075 [Cucumis sativus]
Length = 305
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L++RNIP + E++ F GLV +VYIP + TG +GFAFV+F +A A
Sbjct: 55 LLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHM 114
Query: 279 NGQKFGKRPIAV 290
NG+KF R I V
Sbjct: 115 NGKKFAGREITV 126
>gi|73986922|ref|XP_854218.1| PREDICTED: ELAV-like protein 1 isoform 1 [Canis lupus familiaris]
gi|301773126|ref|XP_002921957.1| PREDICTED: ELAV-like protein 1-like isoform 1 [Ailuropoda
melanoleuca]
gi|344299314|ref|XP_003421331.1| PREDICTED: ELAV-like protein 1 [Loxodonta africana]
gi|281349989|gb|EFB25573.1| hypothetical protein PANDA_010904 [Ailuropoda melanoleuca]
Length = 326
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 14/189 (7%)
Query: 112 EDCSQKQRVARTVIIGGLLNADMAE-EVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGC 170
EDC + + RT +I L +M + E+ L SIG V S L ++++ H L
Sbjct: 11 EDC--RDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAK--LIRDKVAGHSLGY--- 63
Query: 171 KMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKV 230
V Y T K A ++ L+ ++ T+ + L I +P
Sbjct: 64 ----GFVNYVTAKDAERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQ 119
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK--FGKRPI 288
+++DMFS G + N + + TGLS+G AF++F + +AE AI FNG K PI
Sbjct: 120 KDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPI 179
Query: 289 AVDWAVPKN 297
V +A N
Sbjct: 180 TVKFAANPN 188
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 113/305 (37%), Gaps = 41/305 (13%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
++ K + G+G+V + +DA RA+ NG + + I V +A R S E +
Sbjct: 51 LIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRLQSKTIKVSYA--RPSSEVIKDA-- 106
Query: 61 QEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQRV 120
+ + +TM KD E S+ G+ + R L D Q +
Sbjct: 107 -NLYISGLPRTMTQKD-----VEDMFSRF---GRIINSRV-------LVD-----QTTGL 145
Query: 121 ARTVIIGGLLNADMAEEV------HRLAGSIGTVCSVTYPLPKEELEQHGLAQ---EGCK 171
+R V AEE H+ GS + P + L+Q +
Sbjct: 146 SRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNVALLSQLYHSPAR 205
Query: 172 MDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVN 231
V + + + + + H + G V G+ + W + I N+ A
Sbjct: 206 RFGGPVHHQAQRFRFSPMGVDHMSGLSGVNV-------PGNASSGWCIFIYNLGQDADEG 258
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
+ MF P G V NV + + +T KGF FV T +A AI NG + G + + V
Sbjct: 259 ILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVS 318
Query: 292 WAVPK 296
+ K
Sbjct: 319 FKTNK 323
>gi|189203851|ref|XP_001938261.1| nuclear localization sequence-binding protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187985360|gb|EDU50848.1| nuclear localization sequence-binding protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 475
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 48/78 (61%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+ F+ I+++F+ G + V +P + DTG KGF +V F+ +++A +A++
Sbjct: 325 LFLGNVSFECSNESIQEVFAEYGSITRVSLPTDRDTGALKGFGYVDFSSQQEATAALEAL 384
Query: 279 NGQKFGKRPIAVDWAVPK 296
NGQ G R I +D+A P+
Sbjct: 385 NGQDIGGRAIRIDYATPR 402
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHR 49
+ T + + +GFGYV F+ ++A A+E NG +GGR I + +A R
Sbjct: 354 LPTDRDTGALKGFGYVDFSSQQEATAALEALNGQDIGGRAIRIDYATPR 402
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
NT+F+ N+ F+ NE +++ F+ +G + + T KG G++ F + + ATAA+
Sbjct: 323 NTLFLGNVSFECSNESIQEVFAEYGSITRVSLPTDRDTGALKGFGYVDFSSQQEATAALE 382
Query: 486 A 486
A
Sbjct: 383 A 383
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 415 LKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKF 474
+++ E+ ++N +F+ N+ +++D + +++ F FGE+V + + T R KG G+++F
Sbjct: 211 VEEPAAEEGVKN-LFVGNMSWNIDEDWLRREFEGFGEIVGCRVITDRETGRAKGFGYVEF 269
>gi|355685803|gb|AER97853.1| ELAV-like protein 1 [Mustela putorius furo]
Length = 343
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 14/189 (7%)
Query: 112 EDCSQKQRVARTVIIGGLLNADMAE-EVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGC 170
EDC + + RT +I L +M + E+ L SIG V S L ++++ H L
Sbjct: 29 EDC--RDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAK--LIRDKVAGHSLGY--- 81
Query: 171 KMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKV 230
V Y T K A ++ L+ ++ T+ + L I +P
Sbjct: 82 ----GFVNYVTAKDAERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQ 137
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK--FGKRPI 288
+++DMFS G + N + + TGLS+G AF++F + +AE AI FNG K PI
Sbjct: 138 KDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPI 197
Query: 289 AVDWAVPKN 297
V +A N
Sbjct: 198 TVKFAANPN 206
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 112/301 (37%), Gaps = 41/301 (13%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
++ K + G+G+V + +DA RA+ NG + + I V +A R S E +
Sbjct: 69 LIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRLQSKTIKVSYA--RPSSEVIKDA-- 124
Query: 61 QEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQRV 120
+ + +TM KD E S+ G+ + R L D Q +
Sbjct: 125 -NLYISGLPRTMTQKD-----VEDMFSRF---GRIINSRV-------LVD-----QTTGL 163
Query: 121 ARTVIIGGLLNADMAEEV------HRLAGSIGTVCSVTYPLPKEELEQHGLAQ---EGCK 171
+R V AEE H+ GS + P + L+Q +
Sbjct: 164 SRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNVALLSQLYHSPAR 223
Query: 172 MDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVN 231
V + + + + + H + G V G+ + W + I N+ A
Sbjct: 224 RFGGPVHHQAQRFRFSPMGVDHMSGLSGVNV-------PGNASSGWCIFIYNLGQDADEG 276
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
+ MF P G V NV + + +T KGF FV T +A AI NG + G + + V
Sbjct: 277 ILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVS 336
Query: 292 W 292
+
Sbjct: 337 F 337
>gi|126323791|ref|XP_001366151.1| PREDICTED: ELAV-like protein 1 [Monodelphis domestica]
Length = 326
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 14/189 (7%)
Query: 112 EDCSQKQRVARTVIIGGLLNADMAE-EVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGC 170
EDC + + RT +I L +M + E+ L SIG V S L ++++ H L
Sbjct: 11 EDC--RDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAK--LIRDKVAGHSLGY--- 63
Query: 171 KMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKV 230
V Y T K A ++ L+ ++ T+ + L I +P
Sbjct: 64 ----GFVNYVTAKDAERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQ 119
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK--FGKRPI 288
+++DMFS G + N + + TGLS+G AF++F + +AE AI FNG K PI
Sbjct: 120 KDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPI 179
Query: 289 AVDWAVPKN 297
V +A N
Sbjct: 180 TVKFAANPN 188
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 112/299 (37%), Gaps = 29/299 (9%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
++ K + G+G+V + +DA RA+ NG + + I V +A R S E +
Sbjct: 51 LIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRLQSKTIKVSYA--RPSSEVIKDA-- 106
Query: 61 QEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQRV 120
+ + +TM KD + +++ S V + G+ + S+ +
Sbjct: 107 -NLYISGLPRTMTQKD--VEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEE- 162
Query: 121 ARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQ---EGCKMDASAV 177
A T G H+ GS + P + L+Q + V
Sbjct: 163 AITSFNG-----------HKPPGSSEPITVKFAANPNQNKNVALLSQLYHSPARRFGGPV 211
Query: 178 LYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMF 237
+ + + + + H + G V G+ + W + I N+ A + MF
Sbjct: 212 HHQAQRFRFSPMGVDHMTGLSGVNV-------PGNASSGWCIFIYNLGQDADEGILWQMF 264
Query: 238 SPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPK 296
P G V NV + + +T KGF FV T +A AI NG + G + + V + K
Sbjct: 265 GPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSFKTNK 323
>gi|301773128|ref|XP_002921958.1| PREDICTED: ELAV-like protein 1-like isoform 2 [Ailuropoda
melanoleuca]
Length = 325
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 14/189 (7%)
Query: 112 EDCSQKQRVARTVIIGGLLNADMAE-EVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGC 170
EDC + + RT +I L +M + E+ L SIG V S L ++++ H L
Sbjct: 11 EDC--RDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAK--LIRDKVAGHSLGY--- 63
Query: 171 KMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKV 230
V Y T K A ++ L+ ++ T+ + L I +P
Sbjct: 64 ----GFVNYVTAKDAERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQ 119
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK--FGKRPI 288
+++DMFS G + N + + TGLS+G AF++F + +AE AI FNG K PI
Sbjct: 120 KDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPI 179
Query: 289 AVDWAVPKN 297
V +A N
Sbjct: 180 TVKFAANPN 188
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%)
Query: 211 GSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRD 270
G+ + W + I N+ A + MF P G V NV + + +T KGF FV T +
Sbjct: 237 GNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEE 296
Query: 271 AESAIQKFNGQKFGKRPIAVDW 292
A AI NG + G + + V +
Sbjct: 297 AAMAIASLNGYRLGDKILQVSF 318
>gi|299115545|emb|CBN75749.1| serine/arginine rich splicing factor, putative [Ectocarpus
siliculosus]
Length = 308
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + NI F E++++F G + +VYIP + TG +GFAFV++ KRDA+ A+ +
Sbjct: 4 LKVDNIAFTCSPEELREVFEGCGKLGDVYIPRDMRTGEPRGFAFVRYLDKRDADYAVDRL 63
Query: 279 NGQKFGKRPIAVDWA 293
+G +F R + + +A
Sbjct: 64 DGTRFNGRELRIQYA 78
>gi|449459926|ref|XP_004147697.1| PREDICTED: uncharacterized protein LOC101221788 [Cucumis sativus]
Length = 286
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L++RNIP + E++ F GLV +VYIP + TG +GFAFV+F +A A
Sbjct: 53 LLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHM 112
Query: 279 NGQKFGKRPIAV 290
NG+KF R I V
Sbjct: 113 NGKKFAGREITV 124
>gi|325185984|emb|CCA20488.1| RNAbinding protein putative [Albugo laibachii Nc14]
Length = 754
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 116/244 (47%), Gaps = 26/244 (10%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+PF A +++ +F G V V+IP + +T KGF FV F DA+ A+Q
Sbjct: 244 RLFVRNLPFSAVEEDLRTIFEAFGKVAEVHIPLD-ETKRRKGFGFVSFDTVSDAQKALQN 302
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAAAGV--QNKGDGNSDSGSDDDLGDDDAETASDD 335
+G F R + V +A K ++ + + K + ++ +G + + SD
Sbjct: 303 VDGIAFQGRVLYVTFAEAKPEITADPLDKNLSYREKKTLEKQANANQPIGWNASHIRSDA 362
Query: 336 SNSSEKEDLPSNADFDEEVDIARK-VLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTVN 394
+ + + IAR VL++ +L ++ LVK NK+ S+ V+
Sbjct: 363 AVGT----------LANRMGIARSDVLSQEHGNMAVRLALC-ETMLVKENKDFFSNHGVD 411
Query: 395 ESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNT--IFICNLPFDLDNEEVKQRFSAFGEV 452
SA + L+ SKS KS D +++T I I NLP + +E+ Q+F FG++
Sbjct: 412 LSAIQGAL--LSDSKSNAKS-------DIMRSTTVILIKNLPHTTEEDELCQKFGTFGQI 462
Query: 453 VSFV 456
+ F+
Sbjct: 463 LKFL 466
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 143/349 (40%), Gaps = 54/349 (15%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+P ++ F G V + + S+ F FV + A A
Sbjct: 9 RLYVRNLPTYVDNARLRAHFESQGEVTDAAVVLTKADKKSRRFGFVGYKTSDQARRACAY 68
Query: 278 FNGQKFGKRPIAVDWAVPK-----------NIYSSGGAA-AGVQNKGDGN--------SD 317
F+ F + V +AVPK + YSSG + A + N + +
Sbjct: 69 FHQTYFDSCKLNVSFAVPKAEESVCGIRPWSKYSSGSSQFAALHNTNEKKRKLVKGQVAG 128
Query: 318 SGSDDDLGDDDAETASDDSNS-----SEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLP 372
+ S +D ++ AET S + + ++ +N +E+ A + N TS P
Sbjct: 129 TNSTNDF-EEFAETMKARSKARFWANDDVQNFDTNQKSEEDRIKAAETSNSDTSEDTMHP 187
Query: 373 SLSDDSALVKGNKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEG------EDELQN 426
LSD L + D+ + SD K S+ S+P++ Q +G D N
Sbjct: 188 -LSDMEYLRSKAAKCDNKAPTLRVKEASD--KSISTTSEPEA-TQVDGITAQNKADYACN 243
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
+F+ NLPF E+++ F AFG+V V + TKR KG GF+ F TV A A+
Sbjct: 244 RLFVRNLPFSAVEEDLRTIFEAFGKVAE-VHIPLDETKRRKGFGFVSFDTVSDAQKALQN 302
Query: 487 SKTTSGLGIFLKGRQLTVLKA----------LDKKLAH--DKEIDKSKN 523
GI +GR L V A LDK L++ K ++K N
Sbjct: 303 VD-----GIAFQGRVLYVTFAEAKPEITADPLDKNLSYREKKTLEKQAN 346
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
K+IIRN+ F+A V++I+ + G + V +P D G +GFAFV+F +++A+ A
Sbjct: 644 KIIIRNVAFEATVHDIRSLCGAFGQLKRVRMPKKFD-GRHRGFAFVEFMTEQEAKDAFNS 702
Query: 278 FNGQKFGKRPIAVDWA 293
R + ++WA
Sbjct: 703 LCKSHLYGRHLVLEWA 718
>gi|407410696|gb|EKF33036.1| RNA-binding protein, putative [Trypanosoma cruzi marinkellei]
Length = 477
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 209 GEGSKTQ-KWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTC 267
G S Q + L I NIP K + E++++F+P G + + + N TG S G AFV++
Sbjct: 106 GSASDNQSRTNLFISNIPHKMEQRELENLFAPYGQILSAAVMRNIHTGNSLGTAFVRYAT 165
Query: 268 KRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAA 305
+A AI+ +G++ G R IAV WA ++ Y+ G A
Sbjct: 166 TEEAMRAIEGMSGKRIGGRAIAVQWAKKQHDYAPVGEA 203
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 19/154 (12%)
Query: 169 GCKMDASAVLYTTVKSACASVALLHQKEIKGGTV---WARQLG-----GEGSKTQKWKLI 220
G + + V Y T + A ++ + K I G + WA++ GE K KL
Sbjct: 153 GNSLGTAFVRYATTEEAMRAIEGMSGKRIGGRAIAVQWAKKQHDYAPVGEARKKIS-KLF 211
Query: 221 IRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNT----DTGLSKGFAFVKFTCKRDAESAIQ 276
+RNIP +++MFS G V +V I +T D + AF+ + AE A +
Sbjct: 212 VRNIPLDINTVVLEEMFSMYGPVKSVSIHKDTAPDCDKNSERHIAFITYLVDGAAERAAE 271
Query: 277 KF-NGQKF---GKRPIAVDWA--VPKNIYSSGGA 304
N + F GK P+ V A +P+ IY G+
Sbjct: 272 AVHNTRPFPSCGKVPLMVKLAEDIPQRIYHGTGS 305
>gi|402593936|gb|EJW87863.1| hypothetical protein WUBG_01225 [Wuchereria bancrofti]
Length = 103
Score = 63.9 bits (154), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 48/75 (64%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +R + + A+ ++++ +F +G V +VYIP + T S+GFA+VKF RDAE A+++
Sbjct: 16 LYVRQVHYSARPDDLRALFEQMGPVRDVYIPLDYYTRESRGFAYVKFEFTRDAEDALREL 75
Query: 279 NGQKFGKRPIAVDWA 293
NG R I V+WA
Sbjct: 76 NGTSILGRRIEVEWA 90
>gi|255081268|ref|XP_002507856.1| predicted protein [Micromonas sp. RCC299]
gi|226523132|gb|ACO69114.1| predicted protein [Micromonas sp. RCC299]
Length = 292
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%)
Query: 221 IRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNG 280
+ N+ + +++++F P G V +Y+ N +TG S+GFAFV F K DA+ AI K +G
Sbjct: 213 VSNLSEDTREQDLQELFRPFGPVTRIYVAFNRETGESRGFAFVNFVNKDDAQRAINKLDG 272
Query: 281 QKFGKRPIAVDWAVPK 296
+ + V+WA P+
Sbjct: 273 YGYDNLILRVEWAAPR 288
>gi|67968717|dbj|BAE00717.1| unnamed protein product [Macaca fascicularis]
Length = 326
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 14/189 (7%)
Query: 112 EDCSQKQRVARTVIIGGLLNADMAE-EVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGC 170
EDC + + RT +I L +M + E+ L SIG V S L ++++ H L
Sbjct: 11 EDC--RGDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAK--LIRDKVAGHSLGY--- 63
Query: 171 KMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKV 230
V Y T K A ++ L+ ++ T+ + L I +P
Sbjct: 64 ----GFVNYVTAKDAERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQ 119
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK--FGKRPI 288
+++DMFS G + N + + TGLS+G AF++F + +AE AI FNG K PI
Sbjct: 120 KDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPI 179
Query: 289 AVDWAVPKN 297
V +A N
Sbjct: 180 TVKFAANPN 188
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 111/299 (37%), Gaps = 41/299 (13%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
++ K + G+G+V + +DA RA+ NG + + I V +A R S E +
Sbjct: 51 LIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRLQSKTIKVSYA--RPSSEVIKDA-- 106
Query: 61 QEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQRV 120
+ + +TM KD E S+ G+ + R L D Q +
Sbjct: 107 -NLYISGLPRTMTQKD-----VEDMFSRF---GRIINSRV-------LVD-----QTTGL 145
Query: 121 ARTVIIGGLLNADMAEEV------HRLAGSIGTVCSVTYPLPKEELEQHGLAQ---EGCK 171
+R V AEE H+ GS + P + L+Q +
Sbjct: 146 SRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNVALLSQLYHSPAR 205
Query: 172 MDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVN 231
V + + + + + H + G V G+ + W + I N+ A
Sbjct: 206 RFGGPVHHQAQRFRFSPMGVDHMSGLSGVNV-------PGNASSGWCIFIYNLGQDADEG 258
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAV 290
+ MF P G V NV + + +T KGF FV T +A AI NG + G + + V
Sbjct: 259 ILWQMFEPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQV 317
>gi|38201714|ref|NP_001410.2| ELAV-like protein 1 [Homo sapiens]
gi|114675067|ref|XP_001156643.1| PREDICTED: ELAV-like protein 1 isoform 2 [Pan troglodytes]
gi|395750352|ref|XP_002828622.2| PREDICTED: ELAV-like protein 1 [Pongo abelii]
gi|395841768|ref|XP_003793705.1| PREDICTED: ELAV-like protein 1 [Otolemur garnettii]
gi|402914021|ref|XP_003919435.1| PREDICTED: ELAV-like protein 1 [Papio anubis]
gi|403296075|ref|XP_003938946.1| PREDICTED: ELAV-like protein 1 [Saimiri boliviensis boliviensis]
gi|426386981|ref|XP_004059957.1| PREDICTED: ELAV-like protein 1 isoform 1 [Gorilla gorilla gorilla]
gi|20981691|sp|Q15717.2|ELAV1_HUMAN RecName: Full=ELAV-like protein 1; AltName: Full=Hu-antigen R;
Short=HuR
gi|13097228|gb|AAH03376.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [Homo sapiens]
gi|32879929|gb|AAP88795.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [Homo sapiens]
gi|60654991|gb|AAX32059.1| ELAV-like 1 [synthetic construct]
gi|60654993|gb|AAX32060.1| ELAV-like 1 [synthetic construct]
gi|60654995|gb|AAX32061.1| ELAV-like 1 [synthetic construct]
gi|60654997|gb|AAX32062.1| ELAV-like 1 [synthetic construct]
gi|119589355|gb|EAW68949.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R), isoform CRA_a [Homo sapiens]
gi|157928080|gb|ABW03336.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [synthetic construct]
gi|157928791|gb|ABW03681.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [synthetic construct]
gi|208966198|dbj|BAG73113.1| ELAV-like 1protein [synthetic construct]
gi|355703066|gb|EHH29557.1| hypothetical protein EGK_10021 [Macaca mulatta]
gi|355755385|gb|EHH59132.1| hypothetical protein EGM_09177 [Macaca fascicularis]
gi|380784245|gb|AFE63998.1| ELAV-like protein 1 [Macaca mulatta]
gi|383416395|gb|AFH31411.1| ELAV-like protein 1 [Macaca mulatta]
gi|384945706|gb|AFI36458.1| ELAV-like protein 1 [Macaca mulatta]
gi|410212674|gb|JAA03556.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) [Pan
troglodytes]
gi|410265350|gb|JAA20641.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) [Pan
troglodytes]
gi|410305890|gb|JAA31545.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) [Pan
troglodytes]
gi|410342973|gb|JAA40433.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) [Pan
troglodytes]
Length = 326
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 14/189 (7%)
Query: 112 EDCSQKQRVARTVIIGGLLNADMAE-EVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGC 170
EDC + + RT +I L +M + E+ L SIG V S L ++++ H L
Sbjct: 11 EDC--RGDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAK--LIRDKVAGHSLGY--- 63
Query: 171 KMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKV 230
V Y T K A ++ L+ ++ T+ + L I +P
Sbjct: 64 ----GFVNYVTAKDAERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQ 119
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK--FGKRPI 288
+++DMFS G + N + + TGLS+G AF++F + +AE AI FNG K PI
Sbjct: 120 KDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPI 179
Query: 289 AVDWAVPKN 297
V +A N
Sbjct: 180 TVKFAANPN 188
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 113/305 (37%), Gaps = 41/305 (13%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
++ K + G+G+V + +DA RA+ NG + + I V +A R S E +
Sbjct: 51 LIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRLQSKTIKVSYA--RPSSEVIKDA-- 106
Query: 61 QEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQRV 120
+ + +TM KD E S+ G+ + R L D Q +
Sbjct: 107 -NLYISGLPRTMTQKD-----VEDMFSRF---GRIINSRV-------LVD-----QTTGL 145
Query: 121 ARTVIIGGLLNADMAEEV------HRLAGSIGTVCSVTYPLPKEELEQHGLAQ---EGCK 171
+R V AEE H+ GS + P + L+Q +
Sbjct: 146 SRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNVALLSQLYHSPAR 205
Query: 172 MDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVN 231
V + + + + + H + G V G+ + W + I N+ A
Sbjct: 206 RFGGPVHHQAQRFRFSPMGVDHMSGLSGVNV-------PGNASSGWCIFIYNLGQDADEG 258
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
+ MF P G V NV + + +T KGF FV T +A AI NG + G + + V
Sbjct: 259 ILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVS 318
Query: 292 WAVPK 296
+ K
Sbjct: 319 FKTNK 323
>gi|223938363|ref|ZP_03630257.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
gi|223892932|gb|EEF59399.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
Length = 127
Score = 63.5 bits (153), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 48/79 (60%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL + N+PF A NE++DMF+ G V +V + + +G +GF FV + A++A+Q
Sbjct: 4 KLYVGNLPFTATENELQDMFAQHGPVTSVDLIMDKFSGRPRGFGFVTMETQEGAQAAVQA 63
Query: 278 FNGQKFGKRPIAVDWAVPK 296
NG FG RP+ V+ A P+
Sbjct: 64 LNGTDFGGRPLTVNEARPR 82
Score = 48.1 bits (113), Expect = 0.014, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 424 LQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAA 483
+ +++ NLPF E++ F+ G V S ++ + + RP+G GF+ +T E A AA
Sbjct: 1 MSTKLYVGNLPFTATENELQDMFAQHGPVTSVDLIMDKFSGRPRGFGFVTMETQEGAQAA 60
Query: 484 VSASKTTSGLGIFLKGRQLTVLKA 507
V A T GR LTV +A
Sbjct: 61 VQALNGTD-----FGGRPLTVNEA 79
Score = 38.9 bits (89), Expect = 8.7, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHR 49
++ K S RGFG+V E A AV+ NGT GGR + V A R
Sbjct: 34 LIMDKFSGRPRGFGFVTMETQEGAQAAVQALNGTDFGGRPLTVNEARPR 82
>gi|343959022|dbj|BAK63366.1| ELAV-like protein 1 [Pan troglodytes]
Length = 305
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 14/189 (7%)
Query: 112 EDCSQKQRVARTVIIGGLLNADMAE-EVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGC 170
EDC + + RT +I L +M + E+ L SIG V S L ++++ H L
Sbjct: 11 EDC--RGDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAK--LIRDKVAGHSLGY--- 63
Query: 171 KMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKV 230
V Y T K A ++ L+ ++ T+ + L I +P
Sbjct: 64 ----GFVNYVTAKDAERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQ 119
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK--FGKRPI 288
+++DMFS G + N + + TGLS+G AF++F + +AE AI FNG K PI
Sbjct: 120 KDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPI 179
Query: 289 AVDWAVPKN 297
V +A N
Sbjct: 180 TVKFAANPN 188
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%)
Query: 211 GSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRD 270
G+ + W + I N+ A + MF P G V NV + + +T KGF FV T +
Sbjct: 217 GNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEE 276
Query: 271 AESAIQKFNGQKFGKRPIAVDWAVPK 296
A AI NG + G + + V + K
Sbjct: 277 AAMAIASLNGYRLGDKILQVSFKTNK 302
>gi|224098431|ref|XP_002311171.1| predicted protein [Populus trichocarpa]
gi|222850991|gb|EEE88538.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L++RNIP + E++ MF G+V +VYIP + TG +GF FV+F DA A
Sbjct: 46 LLVRNIPRDCRPEELRGMFERFGVVRDVYIPKDYHTGEPRGFGFVQFVEPSDAMEAQHHM 105
Query: 279 NGQKFGKRPIAV 290
NGQ F R + V
Sbjct: 106 NGQVFAGRQMFV 117
>gi|301773130|ref|XP_002921959.1| PREDICTED: ELAV-like protein 1-like isoform 3 [Ailuropoda
melanoleuca]
Length = 339
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 14/189 (7%)
Query: 112 EDCSQKQRVARTVIIGGLLNADMAE-EVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGC 170
EDC + + RT +I L +M + E+ L SIG V S L ++++ H L
Sbjct: 11 EDC--RDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAK--LIRDKVAGHSLGY--- 63
Query: 171 KMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKV 230
V Y T K A ++ L+ ++ T+ + L I +P
Sbjct: 64 ----GFVNYVTAKDAERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQ 119
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK--FGKRPI 288
+++DMFS G + N + + TGLS+G AF++F + +AE AI FNG K PI
Sbjct: 120 KDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPI 179
Query: 289 AVDWAVPKN 297
V +A N
Sbjct: 180 TVKFAANPN 188
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%)
Query: 211 GSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRD 270
G+ + W + I N+ A + MF P G V NV + + +T KGF FV T +
Sbjct: 251 GNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEE 310
Query: 271 AESAIQKFNGQKFGKRPIAVDWAVPK 296
A AI NG + G + + V + K
Sbjct: 311 AAMAIASLNGYRLGDKILQVSFKTNK 336
>gi|167382576|ref|XP_001736171.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165901525|gb|EDR27604.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 697
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 130/302 (43%), Gaps = 54/302 (17%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
++II+N+P +A +K F G + + + T G+S+ F F+ F + A++AI K
Sbjct: 3 RIIIKNLPERADEKILKQQFEKFGGITDCKV-MRTPQGVSRKFGFIGFENEDQAQTAITK 61
Query: 278 FNGQKFGKRPIAVDWA---------VPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDD 328
NG + V A P + YS G
Sbjct: 62 MNGAYIQSSKLQVSLAKAIGDQTIERPWSKYSVG-------------------------- 95
Query: 329 AETASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDS--ALVKGNKE 386
+S SN +++ +P+ E I +K K++S+ L ++++ L G K+
Sbjct: 96 ---SSSFSNDKKRKIIPTK---HETPTIKKK---KVSSSLDELKKIANERRPKLDDGKKK 146
Query: 387 Q-DSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQR 445
+ DS+ N D +N + + KS+ + + +D + I+I NLPF+ +++++
Sbjct: 147 KTDSEDDQNNQQMEEDEEMINEQEHQ-KSMDEIDVKDWEEGRIYITNLPFNCTEDDIRKE 205
Query: 446 FSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVL 505
F FG + + ++TK+ KG GF+ F + A A + F+KGR + V
Sbjct: 206 FDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKACNEMDNK-----FIKGRIVHVT 260
Query: 506 KA 507
A
Sbjct: 261 YA 262
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL+++N+PF+ + E++++F G + V +P D G +KGFAFV++ K++A +A+
Sbjct: 617 KLLVKNVPFETNIKEVRELFRTYGTLRGVRLPKKVD-GQNKGFAFVEYATKQEAANAMAA 675
Query: 278 FNGQKFGKRPIAVDWA 293
F R + +++A
Sbjct: 676 LKNSHFYGRHLIIEYA 691
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 83/395 (21%), Positives = 150/395 (37%), Gaps = 68/395 (17%)
Query: 172 MDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLG--------GEGSKTQKWKLIIRN 223
M +L +S VAL I W + G G K +I++N
Sbjct: 316 MKKEEILDVNAESMAVRVALAENYVINQTKKWLEENGVNCAVLENGMKEKRSNNIIIVKN 375
Query: 224 IPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKF 283
I A E+K +F G + +P SK A V+F DA++A ++ ++
Sbjct: 376 IAASAIDLEVKSLFEKFGTLKQFLMPK------SKALALVEFEIANDAKTAFKRLVYSRY 429
Query: 284 GKRPIAVDWAVPKNIY------------------SSGGAAAGVQNKGDGNSDSGSDDDLG 325
P+ ++WA P+ ++ S K + +D
Sbjct: 430 RGIPLYLEWA-PEKVFDEEKLNKKMEEEKLTQEQQSKTKQKEDDQKKKEDKTKQKEDKKK 488
Query: 326 DDDAETASDDSNSSEKEDLPS------------NADFDEEVDIARKVLNKLTSTTGSLPS 373
++ +T ++ + K D P N F + D+ RKV K S
Sbjct: 489 QEEGKTKQEEDKAITKTDQPELVEEGSKTLYIKNLSFKTKEDVIRKVFEKCGRVLAVTLS 548
Query: 374 LSDDSALVKGN--------KEQDSDKTVNE-SAKVSDVSKLNSSKSKP-------KSLKQ 417
+ D + K + + +D+ + KV D + S+P K K+
Sbjct: 549 KTKDKKVEKNSGFGFVEYARHEDAINAIKTLQGKVIDGHAVQIEISQPKVKDEDHKERKE 608
Query: 418 TEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTV 477
E E ++ N + + N+PF+ + +EV++ F +G + V + +V + KG F+++ T
Sbjct: 609 IE-EHKVSNKLLVKNVPFETNIKEVRELFRTYG-TLRGVRLPKKVDGQNKGFAFVEYATK 666
Query: 478 EAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKL 512
+ A A++A K + GR L + A D +L
Sbjct: 667 QEAANAMAALKNSH-----FYGRHLIIEYAKDTEL 696
>gi|159483435|ref|XP_001699766.1| predicted protein [Chlamydomonas reinhardtii]
gi|158281708|gb|EDP07462.1| predicted protein [Chlamydomonas reinhardtii]
Length = 940
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
+V KG +HRGFG+VQ+A+ EDA RAV +GT++ GRK+ V+ A+ RA LE+R+ K
Sbjct: 45 LVRVKGQPKHRGFGFVQYALPEDAERAVGELDGTALKGRKLQVELAIKRAPLEERKKKRK 104
Query: 61 QEVQ 64
E +
Sbjct: 105 GEAE 108
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ IR + F A +++ FS VG V ++ +GF FV++ DAE A+ +
Sbjct: 16 VFIRGVSFDAVEKDLEAAFSEVGPVKQCFLVRVKGQPKHRGFGFVQYALPEDAERAVGEL 75
Query: 279 NGQKFGKRPIAVDWAV 294
+G R + V+ A+
Sbjct: 76 DGTALKGRKLQVELAI 91
>gi|297275993|ref|XP_001092907.2| PREDICTED: ELAV-like protein 1 isoform 4 [Macaca mulatta]
Length = 387
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 14/189 (7%)
Query: 112 EDCSQKQRVARTVIIGGLLNADMAE-EVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGC 170
EDC + + RT +I L +M + E+ L SIG V S L ++++ H L
Sbjct: 11 EDC--RGDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAK--LIRDKVAGHSLGY--- 63
Query: 171 KMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKV 230
V Y T K A ++ L+ ++ T+ + L I +P
Sbjct: 64 ----GFVNYVTAKDAERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQ 119
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK--FGKRPI 288
+++DMFS G + N + + TGLS+G AF++F + +AE AI FNG K PI
Sbjct: 120 KDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPI 179
Query: 289 AVDWAVPKN 297
V +A N
Sbjct: 180 TVKFAANPN 188
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%)
Query: 211 GSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRD 270
G+ + W + I N+ A + MF P G V NV + + +T KGF FV T +
Sbjct: 299 GNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEE 358
Query: 271 AESAIQKFNGQKFGKRPIAVDWAVPK 296
A AI NG + G + + V + K
Sbjct: 359 AAMAIASLNGYRLGDKILQVSFKTNK 384
>gi|45382283|ref|NP_990164.1| ELAV-like protein 1 [Gallus gallus]
gi|5738249|gb|AAD50313.1|AF176673_1 RNA-binding protein HuA [Gallus gallus]
Length = 326
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)
Query: 112 EDCSQKQRVARTVIIGGLLNADMAE-EVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGC 170
EDC + + RT +I L +M + E+ L SIG V S L ++++ H L
Sbjct: 11 EDC--RDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAK--LIRDKVAGHSLGY--- 63
Query: 171 KMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKV 230
V Y T K A ++ L+ ++ T+ + L I +P
Sbjct: 64 ----GFVNYVTAKDAERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRSMTQ 119
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK--FGKRPI 288
++ DMFS G + N + + TGLS+G AF++F + +AE AI FNG K PI
Sbjct: 120 KDVVDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITNFNGHKPPGSSEPI 179
Query: 289 AVDWAVPKN 297
V +A N
Sbjct: 180 TVKFAANPN 188
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 114/306 (37%), Gaps = 43/306 (14%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
++ K + G+G+V + +DA RA+ NG + + I V +A R S E +
Sbjct: 51 LIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRLQSKTIKVSYA--RPSSEVIKDA-- 106
Query: 61 QEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQRV 120
+ + ++M KD V G+ + R L D Q +
Sbjct: 107 -NLYISGLPRSMTQKDVV--------DMFSRFGRIINSRV-------LVD-----QTTGL 145
Query: 121 ARTVIIGGLLNADMAEEV------HRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDA 174
+R V AEE H+ GS + +V + + + L + C A
Sbjct: 146 SRGVAFIRFDKRSEAEEAITNFNGHKPPGSSEPI-TVKFAANPNQNKNVALLSQLCHSPA 204
Query: 175 ----SAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKV 230
V + + + + + H + G V G+ + W + I N+ A
Sbjct: 205 RRFGGPVHHQAQRFRFSPMGVDHMSGLSGVNV-------PGNASSGWCIFIYNLGQDADE 257
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAV 290
+ MF P G V NV + + +T KGF FV T +A AI NG + G + + V
Sbjct: 258 GILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQV 317
Query: 291 DWAVPK 296
+ K
Sbjct: 318 SFKTNK 323
>gi|190337757|gb|AAI63877.1| RNA binding motif protein 19 [Danio rerio]
Length = 926
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Query: 192 LHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN 251
+ ++E+K G A++ K K+++RNIPF+A V E++++F G + V +P
Sbjct: 779 ISEREVKSGVAQAKRKKQTARKQTTSKILVRNIPFQATVKELRELFCTFGELKTVRLPKK 838
Query: 252 TDTGLSKGFAFVKFTCKRDAESAIQKF--NGQKFGKRPIAVDWA 293
G +GF F+ F K+DA+ A + +G+R + ++WA
Sbjct: 839 GIGGSHRGFGFIDFLTKQDAKKAFSALCHSTHLYGRR-LVLEWA 881
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L IRN+P+ ++K++FS G + V P ++ T KGFAFV + +A SA+ +
Sbjct: 399 RLFIRNMPYTCTEEDLKEVFSKHGPLSEVLFPIDSLTKKPKGFAFVTYMIPENAVSALAQ 458
Query: 278 FNGQKFGKRPIAV 290
+G F R + V
Sbjct: 459 LDGHTFQGRVLHV 471
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 134/307 (43%), Gaps = 44/307 (14%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q GE SK ++++N+P +V +++ +FSP G + V +P +GL+ A V+F
Sbjct: 576 QASGERSKCV---ILVKNLPSGVQVADLEALFSPHGSLGRVLLP---PSGLT---AIVEF 626
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLG 325
+A+ A K KF P+ ++WA P ++++ A + ++
Sbjct: 627 LEPTEAKRAFMKLAYTKFQHVPLYLEWA-PVAVFTTPSAPRPEPQTKEKSAVKNDSVQNE 685
Query: 326 DDDAETASDDSNSSEKEDLPSNADFDEEVDI--ARKVLNKLTSTTGSLPS---------- 373
+++ E DD + LP + F + ++ + + L K S G + S
Sbjct: 686 EEEEEEEEDD------QILPGSTLFIKNLNFITSEETLQKTFSKCGVVKSCTISKKRDKA 739
Query: 374 ---LSDDSALVKGNKEQDSDK--------TVNE---SAKVSDVSKLNSSKSKPKSLKQTE 419
LS V+ + + K TV+E K+S+ ++ S ++ K KQT
Sbjct: 740 GKLLSMGYGFVQYKTPEAAQKAMRQLQHCTVDEHQLEVKISE-REVKSGVAQAKRKKQT- 797
Query: 420 GEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEA 479
+ + I + N+PF +E+++ F FGE+ + + +G GF+ F T +
Sbjct: 798 ARKQTTSKILVRNIPFQATVKELRELFCTFGELKTVRLPKKGIGGSHRGFGFIDFLTKQD 857
Query: 480 ATAAVSA 486
A A SA
Sbjct: 858 AKKAFSA 864
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+FI N+P+ E++K+ FS G + + + +TK+PKG F+ + E A +A++
Sbjct: 400 LFIRNMPYTCTEEDLKEVFSKHGPLSEVLFPIDSLTKKPKGFAFVTYMIPENAVSALAQL 459
Query: 488 KTTSGLGIFLKGRQLTVLKALDKKLAHDKEID 519
G +GR L V+ + KK D+ D
Sbjct: 460 D-----GHTFQGRVLHVMASRLKKEKADQGPD 486
>gi|326431687|gb|EGD77257.1| hypothetical protein PTSG_08350 [Salpingoeca sp. ATCC 50818]
Length = 397
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 211 GSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRD 270
+ T W + NIP++A E+ FS VG V N ++ + +TG SKGF F F
Sbjct: 2 AAPTSVW---VGNIPYEATEEELIKFFSAVGDVKNFHLITDQNTGRSKGFGFCYFLDAAA 58
Query: 271 AESAIQKFNGQKFGKRPIAVDWAVPKN 297
AESA++ +GQ RP+ VD A P++
Sbjct: 59 AESAVRNLSGQPLRDRPLRVDLATPRS 85
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
++++ N+P++ EE+ + FSA G+V +F + Q T R KG GF F A AA S
Sbjct: 5 TSVWVGNIPYEATEEELIKFFSAVGDVKNFHLITDQNTGRSKGFGFCYFLD---AAAAES 61
Query: 486 ASKTTSGLGIFLKGRQLTV 504
A + SG L+ R L V
Sbjct: 62 AVRNLSGQP--LRDRPLRV 78
>gi|255551589|ref|XP_002516840.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223543928|gb|EEF45454.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 257
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L++RN+P A+ +++ F G V +VY+P N TG +GF FVK+ DA A Q+
Sbjct: 54 LLVRNLPLDARPEDLRGPFEKYGPVKDVYLPKNYYTGEPRGFGFVKYRYAEDAAEAKQRM 113
Query: 279 NGQKFGKRPIAVDWA 293
N + G R I + +A
Sbjct: 114 NHKIIGGREIRIVYA 128
>gi|449682653|ref|XP_002170706.2| PREDICTED: RNA-binding protein 8A-like [Hydra magnipapillata]
Length = 164
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 5/109 (4%)
Query: 204 ARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFV 263
A + G + W L + N+ +A+ +++ +MF G + N+++ + TG KG+A V
Sbjct: 58 APHIEGPQKSVEGWILFVTNVHEEAQEDDVHNMFREYGAIRNMHLNLDRRTGFLKGYALV 117
Query: 264 KFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKG 312
++ ++A+SA++ NG+ + I VDWA K GGA G + +G
Sbjct: 118 EYESFKEAQSALEALNGEDLLGQKINVDWAFVK-----GGATKGNKKRG 161
>gi|167385597|ref|XP_001737409.1| RNA-binding protein [Entamoeba dispar SAW760]
gi|165899796|gb|EDR26312.1| RNA-binding protein, putative [Entamoeba dispar SAW760]
Length = 386
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 134/285 (47%), Gaps = 35/285 (12%)
Query: 382 KGNKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEE 441
KG K++++++ + K D L S+ + + L + ED++ TIFI NL F EE
Sbjct: 27 KGKKQRNTERKEEKQEKRFDRKGL--SREEKEELHK---EDQIYRTIFIQNLSFRTTEEE 81
Query: 442 VKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSG---LGIFLK 498
+K++ +G+V + + +GTGF+ F+ A + + SG I +
Sbjct: 82 LKEKMGEYGDVSYCKICMDKEKGISRGTGFVCFRKRGVADKIIEEAYMFSGNKESDIEID 141
Query: 499 GRQLTVLKALDKKLAHDKEIDKSKNE----TNDHRNLYLAKEGLILEGTPAAEGVSDDDM 554
GR+L + KA+ K+ A KE SK + D+RN+ LA G + G++ ++
Sbjct: 142 GRRLILQKAIKKEQA--KETSDSKKKKKEGIKDNRNVSLAMVGQKTKEEYLQLGLTPNEA 199
Query: 555 SKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKS----MTEKGLKKLCIDAVVSRASKQK 610
R ++ KL++ NF V++ R+ + N+PK+ M + K C+ +S
Sbjct: 200 KIRLKAQMERNKKLKNVNFCVNKYRVCVRNIPKNSNKKMIMETFGKYCMKGKIS------ 253
Query: 611 PVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLN 655
IK ++ ++GK + G F+ FTE + A + +N
Sbjct: 254 ----DIKIIKG-ERGK------AIGYCFLTFTEAEDAYQFVEKVN 287
>gi|449666027|ref|XP_002162990.2| PREDICTED: probable RNA-binding protein 19-like [Hydra
magnipapillata]
Length = 914
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 95/189 (50%), Gaps = 23/189 (12%)
Query: 121 ARTVIIGGLLNADMAEEVHR-LAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVLY 179
A+ V+ LN + EE + S G + +VT + K++ ++ A M + Y
Sbjct: 687 AQAVLFVKNLNFNTVEERFKEFFSSCGEIKTVT--IAKKQDPKNPSAM--LSMGYGFIEY 742
Query: 180 TTVKSACASVALLHQKEIKGGTV-------------WARQLGGEGSKTQKWKLIIRNIPF 226
++S ++ LL E+ G + +R+ E ++ K+++RNIPF
Sbjct: 743 KKIESVEKALKLLQHCELDGHKLELKKSHRESILPKVSRKRANEKNQVSS-KMVVRNIPF 801
Query: 227 KAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF--NGQKFG 284
+A V E++++FS G + ++ +P TG +GFAF+ FT K+DA+ A + + +G
Sbjct: 802 EATVKELQELFSTFGHIKSLRLPKKI-TGTHRGFAFIDFTTKQDAKRAFKALCQSTHLYG 860
Query: 285 KRPIAVDWA 293
+R + ++WA
Sbjct: 861 RR-LVLEWA 868
Score = 45.8 bits (107), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 138/309 (44%), Gaps = 32/309 (10%)
Query: 207 LGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFT 266
G S K ++++N+P + +E++++FS G + + +P G++ A V+F
Sbjct: 578 FGQANSLRSKTVILVKNLPPQTLTSELREIFSKYGDLGRLLMP---PFGIT---AIVEFI 631
Query: 267 CKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGD 326
+DA++A KF P+ ++WA P ++ S + D S+D++ D
Sbjct: 632 QSKDAKNAFNNLAYSKFKHTPLYLEWA-PLDVLSGEVKKVVEKKV----EDVESEDEIND 686
Query: 327 DDAETASDDSNSSEKED----LPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVK 382
A + N + E+ S+ + V IA+K K S LS ++
Sbjct: 687 AQAVLFVKNLNFNTVEERFKEFFSSCGEIKTVTIAKKQDPKNPSAM-----LSMGYGFIE 741
Query: 383 GNKEQDSDKTVNESAKVS-DVSKLNSSKSKPKSL------KQTEGEDELQNTIFICNLPF 435
K + +K + D KL KS +S+ K+ ++++ + + + N+PF
Sbjct: 742 YKKIESVEKALKLLQHCELDGHKLELKKSHRESILPKVSRKRANEKNQVSSKMVVRNIPF 801
Query: 436 DLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGI 495
+ +E+++ FS FG + S + + ++T +G F+ F T + A A A ++ L
Sbjct: 802 EATVKELQELFSTFGHIKS-LRLPKKITGTHRGFAFIDFTTKQDAKRAFKALCQSTHLY- 859
Query: 496 FLKGRQLTV 504
GR+L +
Sbjct: 860 ---GRRLVL 865
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 221 IRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNG 280
+R IPFK E+ + F P+ ++ ++ P N D G S G+AFV F D +SA++K +
Sbjct: 309 MRGIPFKCSEKEVIEFFKPL-IIDDIRFPKNKD-GKSSGYAFVDFKTIEDVKSALKK-DK 365
Query: 281 QKFGKRPIAV 290
QK R I +
Sbjct: 366 QKIQGRYIEL 375
>gi|49619013|gb|AAT68091.1| KIAA0682-like [Danio rerio]
Length = 927
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Query: 192 LHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN 251
+ ++E+K G A++ K K+++RNIPF+A V E++++F G + V +P
Sbjct: 780 ISEREVKSGVAQAKRKKQTARKQTTSKILVRNIPFQATVKELRELFCTFGELKTVRLPKK 839
Query: 252 TDTGLSKGFAFVKFTCKRDAESAIQKF--NGQKFGKRPIAVDWA 293
G +GF F+ F K+DA+ A + +G+R + ++WA
Sbjct: 840 GIGGSHRGFGFIDFLTKQDAKKAFSALCHSTHLYGRR-LVLEWA 882
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L IRN+P+ ++K++FS G + V P ++ T KGFAFV + +A SA+ +
Sbjct: 400 RLFIRNMPYTCTEEDLKELFSKHGPLSEVLFPIDSLTKKPKGFAFVTYMIPENAVSALAQ 459
Query: 278 FNGQKFGKRPIAV 290
+G F R + V
Sbjct: 460 LDGHTFQGRVLHV 472
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 134/307 (43%), Gaps = 44/307 (14%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q GE SK ++++N+P +V +++ +FSP G + V +P +GL+ A V+F
Sbjct: 577 QASGERSKCV---ILVKNLPSGVQVADLEALFSPHGSLGRVLLP---PSGLT---AIVEF 627
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLG 325
+A+ A K KF P+ ++WA P ++++ A + ++
Sbjct: 628 LEPTEAKRAFMKLAYTKFQHVPLYLEWA-PVAVFTTPSAPRPEPQTKEKSAVKNDSVQNE 686
Query: 326 DDDAETASDDSNSSEKEDLPSNADFDEEVDI--ARKVLNKLTSTTGSLPS---------- 373
+++ E DD + LP + F + ++ + + L K S G + S
Sbjct: 687 EEEEEEEEDD------QILPGSTLFIKNLNFITSEETLQKTFSKCGVVKSCTISKKRDKA 740
Query: 374 ---LSDDSALVKGNKEQDSDK--------TVNE---SAKVSDVSKLNSSKSKPKSLKQTE 419
LS V+ + + K TV+E K+S+ ++ S ++ K KQT
Sbjct: 741 GKLLSMGYGFVQYKTPEAAQKAMRQLQHCTVDEHQLEVKISE-REVKSGVAQAKRKKQT- 798
Query: 420 GEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEA 479
+ + I + N+PF +E+++ F FGE+ + + +G GF+ F T +
Sbjct: 799 ARKQTTSKILVRNIPFQATVKELRELFCTFGELKTVRLPKKGIGGSHRGFGFIDFLTKQD 858
Query: 480 ATAAVSA 486
A A SA
Sbjct: 859 AKKAFSA 865
Score = 42.4 bits (98), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+FI N+P+ E++K+ FS G + + + +TK+PKG F+ + E A +A++
Sbjct: 401 LFIRNMPYTCTEEDLKELFSKHGPLSEVLFPIDSLTKKPKGFAFVTYMIPENAVSALAQL 460
Query: 488 KTTSGLGIFLKGRQLTVLKALDKKLAHDKEID 519
G +GR L V+ + KK D+ D
Sbjct: 461 D-----GHTFQGRVLHVMASRLKKEKADQGPD 487
Score = 39.3 bits (90), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+LI++N+P K + + MF+ G + + + D G + F FV F + DA+ A++
Sbjct: 3 RLIVKNLPNGMKEDRFRKMFADFGTLTDCALKFTKD-GKFRKFGFVGFKTEEDAQKALKH 61
Query: 278 FN 279
FN
Sbjct: 62 FN 63
>gi|326476993|gb|EGE01003.1| nucleolin protein Nsr1 [Trichophyton equinum CBS 127.97]
Length = 479
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L I NI F A N ++++FS G + + +P + D+G KGF +V+F+ +A +A++
Sbjct: 346 LFIGNISFSADENMVQELFSKYGTIQGIRLPTDPDSGRPKGFGYVQFSSVDEARAALEAE 405
Query: 279 NGQKFGKRPIAVDWAVPK 296
NG G R I +D++ PK
Sbjct: 406 NGADLGGRSIRLDFSTPK 423
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKI 41
+ T S +GFGYVQF+ +++A A+E +NG +GGR I
Sbjct: 375 LPTDPDSGRPKGFGYVQFSSVDEARAALEAENGADLGGRSI 415
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+F+ NL +++D E ++ F FGE+ V + + R +G G+++F VE A A A
Sbjct: 240 LFVGNLSWNVDEEWLRSEFEEFGELSGTRIVTDRESGRSRGFGYVEFVNVEDAVKAHGAK 299
Query: 488 KTTSGLGIFLKGRQLTV 504
K L GR++ +
Sbjct: 300 KDAE-----LDGRKMNL 311
>gi|119589356|gb|EAW68950.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R), isoform CRA_b [Homo sapiens]
Length = 445
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 14/189 (7%)
Query: 112 EDCSQKQRVARTVIIGGLLNADMAE-EVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGC 170
EDC + + RT +I L +M + E+ L SIG V S L ++++ H L
Sbjct: 130 EDC--RGDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAK--LIRDKVAGHSLGY--- 182
Query: 171 KMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKV 230
V Y T K A ++ L+ ++ T+ + L I +P
Sbjct: 183 ----GFVNYVTAKDAERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQ 238
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK--FGKRPI 288
+++DMFS G + N + + TGLS+G AF++F + +AE AI FNG K PI
Sbjct: 239 KDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPI 298
Query: 289 AVDWAVPKN 297
V +A N
Sbjct: 299 TVKFAANPN 307
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 112/301 (37%), Gaps = 41/301 (13%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
++ K + G+G+V + +DA RA+ NG + + I V +A R S E +
Sbjct: 170 LIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRLQSKTIKVSYA--RPSSEVIKDA-- 225
Query: 61 QEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQRV 120
+ + +TM KD E S+ G+ + R L D Q +
Sbjct: 226 -NLYISGLPRTMTQKD-----VEDMFSRF---GRIINSRV-------LVD-----QTTGL 264
Query: 121 ARTVIIGGLLNADMAEEV------HRLAGSIGTVCSVTYPLPKEELEQHGLAQ---EGCK 171
+R V AEE H+ GS + P + L+Q +
Sbjct: 265 SRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNVALLSQLYHSPAR 324
Query: 172 MDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVN 231
V + + + + + H + G V G+ + W + I N+ A
Sbjct: 325 RFGGPVHHQAQRFRFSPMGVDHMSGLSGVNV-------PGNASSGWCIFIYNLGQDADEG 377
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
+ MF P G V NV + + +T KGF FV T +A AI NG + G + + V
Sbjct: 378 ILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVS 437
Query: 292 W 292
+
Sbjct: 438 F 438
>gi|357162700|ref|XP_003579494.1| PREDICTED: uncharacterized protein LOC100845138 [Brachypodium
distachyon]
Length = 929
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 134/311 (43%), Gaps = 21/311 (6%)
Query: 201 TVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGF 260
T+ Q GG+ + L + N+P +++ ++F P G + + TGLSKG+
Sbjct: 188 TLPLSQEGGKLKEVDNTNLYVGNLPASVGSHKLIELFLPFGRIVRSKVADECFTGLSKGY 247
Query: 261 AFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWA-VPKNIYSSGGAAAGVQNKGDGNSDSG 319
FVK+ A +AI + NG+ + + V A VP + G+ +Q+ + S
Sbjct: 248 GFVKYDDPHSATAAINRMNGRLVDGKILEVRVAGVPPS-----GSNPSIQSVSETYSQPS 302
Query: 320 SDDDLGDDDAETASDDSNSSE--KEDLPSNADFDEEV--DIARKVLNKLTSTTGSLPSLS 375
+ D+ S E + LP D +V D A LNK S
Sbjct: 303 EEIDMSSLYVRNLSLSMTKEELLQHFLPFGKIIDAKVPRDYATG-LNKGYGFVRYSNSHE 361
Query: 376 DDSALVKGNKEQDSDKTVNESAKVSDVSK-LNSSKSKPKSLKQTEGEDELQNTIFICNLP 434
+A++ N K + +VS VS L++S + + + E ++ N +++CN+P
Sbjct: 362 AANAIIHLNGHLVEGKKME--VRVSGVSPALSNSAVESHTDARLIKEIDMAN-LYVCNIP 418
Query: 435 FDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKG-TGFLKFKTVEAATAAVSASKTTSGL 493
+D +++ + F FG++ HQ T KG GF+KF + A A++
Sbjct: 419 TSIDTKKLIEIFLPFGKITHARVAAHQGTYSGKGRYGFVKFADSQCAAEAITLMD----- 473
Query: 494 GIFLKGRQLTV 504
G ++G L V
Sbjct: 474 GALVEGETLVV 484
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%)
Query: 208 GGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTC 267
G EG + L + ++P ++ ++F P G + + + TG+SKGF FV+F
Sbjct: 696 GNEGRQIDMANLYVCHLPLYITTEKLIEIFLPCGQITQARVVTDRYTGISKGFGFVRFAD 755
Query: 268 KRDAESAIQKFNG 280
A A+ NG
Sbjct: 756 TYSAAVALTHMNG 768
>gi|308504932|ref|XP_003114649.1| hypothetical protein CRE_28335 [Caenorhabditis remanei]
gi|308258831|gb|EFP02784.1| hypothetical protein CRE_28335 [Caenorhabditis remanei]
Length = 150
Score = 62.8 bits (151), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 52/80 (65%)
Query: 214 TQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAES 273
+Q + + + N+P++ EI + FS VG+V NV I ++ +TG +GFAFV+++ + A+
Sbjct: 69 SQGFSVYVGNVPYQGTEEEIGNYFSTVGIVNNVRIVYDRETGRPRGFAFVEYSEEAGAQR 128
Query: 274 AIQKFNGQKFGKRPIAVDWA 293
A+++ NG F R + V++A
Sbjct: 129 AVEELNGAAFNGRNLRVNYA 148
>gi|302810024|ref|XP_002986704.1| hypothetical protein SELMODRAFT_182522 [Selaginella moellendorffii]
gi|300145592|gb|EFJ12267.1| hypothetical protein SELMODRAFT_182522 [Selaginella moellendorffii]
Length = 730
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KLI+RN+ F+A ++K +FSP G V V +P D G +GFAFV+F K++A++A +
Sbjct: 627 KLIVRNVAFEATRKDLKQLFSPFGQVKKVKLPKKFD-GNHRGFAFVEFVTKQEAQNAFEA 685
Query: 278 FNGQKFGKRPIAVDWA 293
R + ++WA
Sbjct: 686 LGSSHLYGRHLVLEWA 701
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 160/384 (41%), Gaps = 66/384 (17%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
++ ++N+P +++++ F G V + + D G S+ F FV F + +AESA+
Sbjct: 6 RVCVKNLPTYVTDDKLREHFGAKGQVTDAKVMRTRD-GKSRRFGFVGFYSQEEAESAVAY 64
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDDSN 337
FN + + A S G AA ++ S + ++ A+ +
Sbjct: 65 FNRSFLDTSRLVCEVA-----RSVGDAAVRPWSRHSKGSSAYEKTHAPEEKAQLKPKKTV 119
Query: 338 SSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTVNESA 397
S ++ D + DE L+ + T + +DD+ L +Q S K +++
Sbjct: 120 SVDR-DQEQDPGLDE-------FLSVMQPRTKTKVWANDDAKLTT---QQPSSKASDDAG 168
Query: 398 KVSDVSKLNSSKSKPKS-----LKQTEG----------------EDELQNT-------IF 429
VSD+ L S + S K+TEG E+ Q+ +F
Sbjct: 169 PVSDLYYLKSKVRQQWSDDSDDEKETEGGAKPQQQADTGDRPGNEEAAQDVAETDTGRLF 228
Query: 430 ICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKT 489
+ NL + EE+ F +GEVV + + T R KG G++ F E AT A++
Sbjct: 229 VRNLAYTTSEEELASLFGQYGEVVQVHLICDKETNRSKGYGYVGFTLPEEATRAMTELDN 288
Query: 490 TSGLGIFLKGRQLTVLKA----------LDK--KLAHDKEIDKSKNETNDHRNLYLAKEG 537
+ IF +GR L VL A LD+ L ++E+++ K E++ + +
Sbjct: 289 S----IF-QGRLLHVLPAKQQTSQVKQKLDRPMNLKQEREVERKKKESSGNTQAW---NP 340
Query: 538 LILEGTPAAEGVSDD-DMSKRQML 560
L + AE V+ +S+R+ L
Sbjct: 341 LYMRPDTVAENVARQYGISRREFL 364
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 112/517 (21%), Positives = 207/517 (40%), Gaps = 87/517 (16%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
++ K +N +G+GYV F + E+A RA+ + + GR + V A + S Q + K+
Sbjct: 256 LICDKETNRSKGYGYVGFTLPEEATRAMTELDNSIFQGRLLHVLPAKQQTS--QVKQKLD 313
Query: 61 QEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQRV 120
+ + + E+ ++ K SG + + L TV A GI S+++
Sbjct: 314 RPMNLKQ-EREVERKKKESSGNTQAWNPLYMRPDTVAENVARQYGI--------SRRE-- 362
Query: 121 ARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVLYT 180
L+ + + RLA V S T + LAQ+G ++ +
Sbjct: 363 --------FLDPEAEDVAVRLALGETHVLSET---------KRSLAQQGVNVELLEKI-- 403
Query: 181 TVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPV 240
SA + + + ++++N+PF ++ +F P
Sbjct: 404 ---SASKTSGVTRSSRV---------------------ILVKNLPFSTTEVDLFGVFCPY 439
Query: 241 GLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYS 300
G + + +P +K A V+F +A A + +KF P+ ++WA P+++ S
Sbjct: 440 GSLGRLVLPP------TKTVAIVEFLESSEARKAFESLAYRKFKHVPLYLEWA-PQDLLS 492
Query: 301 SGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDDSNSSEKEDL---PSNADFDEEVDIA 357
V K +G S D L +D AS S++ ++L ++A + +
Sbjct: 493 EKKDGGVVPAKLEGTS---MKDQLVANDEGAASTRSSTVFVKNLNFKTTDASLRKHFEGR 549
Query: 358 RKVLNKLTSTTGSLPSLSDDS-ALVKGNKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLK 416
K + T+T PS + S ++ G E DS T K S L+ + +
Sbjct: 550 VKAGSLRTATVKRKPSKTGASLSMGFGFVEFDSADTAERVCKEMQGSVLDGHALVLQPSR 609
Query: 417 QTEGEDELQNTI---------FICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPK 467
G+DE + + + N+ F+ +++KQ FS FG+V V + + +
Sbjct: 610 A--GDDEKPSKVDAKGSSSKLIVRNVAFEATRKDLKQLFSPFGQVKK-VKLPKKFDGNHR 666
Query: 468 GTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV 504
G F++F T + A A A ++ L GR L +
Sbjct: 667 GFAFVEFVTKQEAQNAFEALGSSH-----LYGRHLVL 698
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%)
Query: 212 SKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDA 271
++T +L +RN+ + E+ +F G V V++ + +T SKG+ +V FT +A
Sbjct: 220 AETDTGRLFVRNLAYTTSEEELASLFGQYGEVVQVHLICDKETNRSKGYGYVGFTLPEEA 279
Query: 272 ESAIQKFNGQKFGKRPIAV 290
A+ + + F R + V
Sbjct: 280 TRAMTELDNSIFQGRLLHV 298
>gi|341882512|gb|EGT38447.1| hypothetical protein CAEBREN_12601 [Caenorhabditis brenneri]
Length = 84
Score = 62.8 bits (151), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 215 QKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESA 274
Q + + + N+P++ +I + FS VG+V NV I ++ +TG +GFAFV++T + A+ A
Sbjct: 4 QGFSVYVGNVPYQGTEEDIGNYFSTVGVVNNVRIVYDRETGRPRGFAFVEYTDESGAQRA 63
Query: 275 IQKFNGQKFGKRPIAVDWA 293
+Q+ NG F R + V++A
Sbjct: 64 VQELNGTSFNGRNLRVNFA 82
>gi|426193181|gb|EKV43115.1| hypothetical protein AGABI2DRAFT_188163, partial [Agaricus bisporus
var. bisporus H97]
Length = 882
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 120/307 (39%), Gaps = 76/307 (24%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVE--MKNGTSVGGRKIGVKHAMHRASLEQRRSK 58
+VT+ G+ +G GYV FA+ EDA A + K G S+ GRK+ + A H K
Sbjct: 49 VVTEHGTGVSKGVGYVSFAMKEDAEAAYQKISKEGISLVGRKLRAEWAEH---------K 99
Query: 59 VTQEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQ 118
Q+ + E+I + KPR ++
Sbjct: 100 PKQKPKDEEIPAS-------------------------KPRP-------VSHAPKAPHDP 127
Query: 119 RVARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEE-LEQHGLAQEGCKMDASAV 177
RT+II GL A+++ + V +P E+ E +A
Sbjct: 128 VAIRTIIISGLPQTLDAKQLWKKIRKYDGAEKVDWPYKSEDGTEDPSIAH---------A 178
Query: 178 LYTTVKSACASVALLHQKEIKGGTV----------WARQLGGEGSK------------TQ 215
L++T +A +V LH KG + ++ SK +
Sbjct: 179 LFSTPSAANNAVTKLHAHVFKGSLLSVALKKRLENLSKAANPAKSKPTDTKTTTTLAPSH 238
Query: 216 KWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGL-SKGFAFVKFTCKRDAESA 274
+LI+RN+PF +++ +F P G + ++IP + +KGFAFV K DAE A
Sbjct: 239 ASRLIVRNLPFDITEQDLRAVFLPYGPIHEIHIPGVEGSKTRTKGFAFVWMLSKPDAERA 298
Query: 275 IQKFNGQ 281
I+ NG+
Sbjct: 299 IEGCNGK 305
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 116/275 (42%), Gaps = 28/275 (10%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+P+ A +I+ +FS + V + ++ TG+SKG +V F K DAE+A QK
Sbjct: 20 LFVSNLPYTATSVDIQTLFSDIAPVRSAFVVTEHGTGVSKGVGYVSFAMKEDAEAAYQKI 79
Query: 279 N--GQKFGKRPIAVDWAV------PKNIYSSGGAAAGVQNKGDGNSD---------SGSD 321
+ G R + +WA PK+ V + D SG
Sbjct: 80 SKEGISLVGRKLRAEWAEHKPKQKPKDEEIPASKPRPVSHAPKAPHDPVAIRTIIISGLP 139
Query: 322 DDLGDDDAETASDDSNSSEKEDLPSNA-DFDEEVDIARKVLNKLTSTTGSLPSLSDDSAL 380
L + +EK D P + D E+ IA + + ++ ++ L + +
Sbjct: 140 QTLDAKQLWKKIRKYDGAEKVDWPYKSEDGTEDPSIAHALFSTPSAANNAVTKLH--AHV 197
Query: 381 VKGNKEQDSDKTVNESAKVSDVSK-LNSSKSKPKSLKQTEG-EDELQNTIFICNLPFDLD 438
KG S +V ++ ++SK N +KSKP K T + + + NLPFD+
Sbjct: 198 FKG-----SLLSVALKKRLENLSKAANPAKSKPTDTKTTTTLAPSHASRLIVRNLPFDIT 252
Query: 439 NEEVKQRFSAFGEVVSF-VPVLHQVTKRPKGTGFL 472
++++ F +G + +P + R KG F+
Sbjct: 253 EQDLRAVFLPYGPIHEIHIPGVEGSKTRTKGFAFV 287
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 47/104 (45%), Gaps = 5/104 (4%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T+F+ NLP+ + +++ FS V S V T KG G++ F E A AA
Sbjct: 19 TLFVSNLPYTATSVDIQTLFSDIAPVRSAFVVTEHGTGVSKGVGYVSFAMKEDAEAAY-- 76
Query: 487 SKTTSGLGIFLKGRQLTVLKA--LDKKLAHDKEIDKSKNETNDH 528
+ S GI L GR+L A K+ D+EI SK H
Sbjct: 77 -QKISKEGISLVGRKLRAEWAEHKPKQKPKDEEIPASKPRPVSH 119
>gi|332852452|ref|XP_001156587.2| PREDICTED: ELAV-like protein 1 isoform 1 [Pan troglodytes]
gi|397477357|ref|XP_003810039.1| PREDICTED: ELAV-like protein 1 [Pan paniscus]
gi|426386983|ref|XP_004059958.1| PREDICTED: ELAV-like protein 1 isoform 2 [Gorilla gorilla gorilla]
gi|194375035|dbj|BAG62630.1| unnamed protein product [Homo sapiens]
Length = 353
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 14/189 (7%)
Query: 112 EDCSQKQRVARTVIIGGLLNADMAE-EVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGC 170
EDC + + RT +I L +M + E+ L SIG V S L ++++ H L
Sbjct: 38 EDC--RGDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAK--LIRDKVAGHSLGY--- 90
Query: 171 KMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKV 230
V Y T K A ++ L+ ++ T+ + L I +P
Sbjct: 91 ----GFVNYVTAKDAERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQ 146
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK--FGKRPI 288
+++DMFS G + N + + TGLS+G AF++F + +AE AI FNG K PI
Sbjct: 147 KDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPI 206
Query: 289 AVDWAVPKN 297
V +A N
Sbjct: 207 TVKFAANPN 215
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 113/305 (37%), Gaps = 41/305 (13%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
++ K + G+G+V + +DA RA+ NG + + I V +A R S E +
Sbjct: 78 LIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRLQSKTIKVSYA--RPSSEVIKDA-- 133
Query: 61 QEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQRV 120
+ + +TM KD E S+ G+ + R L D Q +
Sbjct: 134 -NLYISGLPRTMTQKD-----VEDMFSRF---GRIINSRV-------LVD-----QTTGL 172
Query: 121 ARTVIIGGLLNADMAEEV------HRLAGSIGTVCSVTYPLPKEELEQHGLAQ---EGCK 171
+R V AEE H+ GS + P + L+Q +
Sbjct: 173 SRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNVALLSQLYHSPAR 232
Query: 172 MDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVN 231
V + + + + + H + G V G+ + W + I N+ A
Sbjct: 233 RFGGPVHHQAQRFRFSPMGVDHMSGLSGVNV-------PGNASSGWCIFIYNLGQDADEG 285
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
+ MF P G V NV + + +T KGF FV T +A AI NG + G + + V
Sbjct: 286 ILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVS 345
Query: 292 WAVPK 296
+ K
Sbjct: 346 FKTNK 350
>gi|440640661|gb|ELR10580.1| hypothetical protein GMDG_04852 [Geomyces destructans 20631-21]
Length = 447
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q G+ + L + NI F+A + + + F G V NV +P + D+G KGF ++ F
Sbjct: 285 QTYGDAKNPESDTLFVGNISFEANEDMLGEAFGAHGTVVNVRLPTDMDSGNPKGFGYITF 344
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPK 296
+ DA++A++ G G RP+ +D+A P+
Sbjct: 345 SSVEDAKNAMENMMGADVGGRPVRLDYATPR 375
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%)
Query: 417 QTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKF 474
+TE ED +F+ NL +++D+E + + F FGE+ + + + R KG G+++F
Sbjct: 183 KTEVEDTGSKNLFVGNLSWNIDDEWLYREFEEFGEITGARVISDRESGRSKGFGYVEF 240
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHR 49
+ T S +GFGY+ F+ +EDA A+E G VGGR + + +A R
Sbjct: 327 LPTDMDSGNPKGFGYITFSSVEDAKNAMENMMGADVGGRPVRLDYATPR 375
>gi|449541007|gb|EMD31994.1| hypothetical protein CERSUDRAFT_119299 [Ceriporiopsis subvermispora
B]
Length = 291
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 51/86 (59%)
Query: 211 GSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRD 270
GS+ L + NI + N+++++FS G V VY+ + +TG KGFAFV F K D
Sbjct: 203 GSRDDMPTLRVTNISEDTQENDLRELFSRFGRVARVYVGRDRETGAGKGFAFVSFESKGD 262
Query: 271 AESAIQKFNGQKFGKRPIAVDWAVPK 296
A+ A++K +G+ + ++V W+ P+
Sbjct: 263 AQLAMEKMHGRGYDNLILSVQWSQPR 288
>gi|268569444|ref|XP_002640524.1| Hypothetical protein CBG18686 [Caenorhabditis briggsae]
Length = 84
Score = 62.4 bits (150), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 49/79 (62%)
Query: 215 QKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESA 274
Q + + + N+P++ EI FS VG+V NV I + +TG +GFAFV+FT + A+ A
Sbjct: 4 QGFSVYVGNVPYQVSEEEIGQWFSSVGVVNNVRIVFDRETGRPRGFAFVEFTDEAGAQRA 63
Query: 275 IQKFNGQKFGKRPIAVDWA 293
+++ NG F R + V++A
Sbjct: 64 VEQLNGASFNGRNLRVNYA 82
Score = 41.2 bits (95), Expect = 1.8, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++++ N+P+ + EE+ Q FS+ G V + V + T RP+G F++F A AV
Sbjct: 7 SVYVGNVPYQVSEEEIGQWFSSVGVVNNVRIVFDRETGRPRGFAFVEFTDEAGAQRAVEQ 66
Query: 487 SKTTSGLGIFLKGRQLTV 504
S GR L V
Sbjct: 67 LNGAS-----FNGRNLRV 79
>gi|302812317|ref|XP_002987846.1| hypothetical protein SELMODRAFT_269321 [Selaginella moellendorffii]
gi|302824248|ref|XP_002993769.1| hypothetical protein SELMODRAFT_272337 [Selaginella moellendorffii]
gi|300138419|gb|EFJ05188.1| hypothetical protein SELMODRAFT_272337 [Selaginella moellendorffii]
gi|300144465|gb|EFJ11149.1| hypothetical protein SELMODRAFT_269321 [Selaginella moellendorffii]
Length = 287
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 51/87 (58%)
Query: 211 GSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRD 270
GS+ + + N+ + +++++F P G + +Y+ + +TGLS+GFAF+ F + D
Sbjct: 200 GSRDDSNSIRVTNLSEDTREQDLQELFRPFGNISRIYVAFDRETGLSRGFAFINFVNRDD 259
Query: 271 AESAIQKFNGQKFGKRPIAVDWAVPKN 297
A AI+K +G + + V+WA PK+
Sbjct: 260 AVRAIKKLDGYGYDNLILRVEWATPKD 286
>gi|449477354|ref|XP_002196178.2| PREDICTED: probable RNA-binding protein 19 [Taeniopygia guttata]
Length = 944
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A V EI+++FS G + V +P TG +GF FV F K+DA+ A Q
Sbjct: 819 KILVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFVTKQDAKKAFQ 878
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 879 ALCHSTHLYGRR-LVLEWA 896
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 152/359 (42%), Gaps = 54/359 (15%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q GE SKT ++++N+P E++ +F G + V +P T A V+F
Sbjct: 580 QAAGERSKTV---ILVKNLPAGTSALELEQLFGHHGGLGRVLLPEGGIT------AIVEF 630
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAA---AGVQNKGD--GNSDSGS 320
+A+ A + KF P+ ++WA P ++ S AGV K D G +
Sbjct: 631 LEPTEAKQAFTRLAYSKFHSVPLYLEWA-PMGVFLSPAPQKKKAGVPGKEDEAGLVPGEA 689
Query: 321 DDDLGDDDAETASDDSNSSEKEDLPSNADFDEEVDIA--RKVLNKLTSTTGSLPS----- 373
D + A+ ++ E+E++P F + ++ A L + S G+L S
Sbjct: 690 TKDSEEAAAQEEEEEEEEEEEENIPGCTLFIKNLNFATTEDTLKETFSKVGALKSCTISK 749
Query: 374 --------LSDDSALVKGNKEQDSDKTVNESAKVS-DVSKLN---SSKSKPKSLKQTE-- 419
LS V+ K + + K + + + D KL S ++ ++K T
Sbjct: 750 KKDKAGTLLSMGFGFVEYKKPESAQKALRQLQGCTVDGHKLEVKLSERAVRPAVKSTRKK 809
Query: 420 --GEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VPVLHQVTKRPKGTGFLKFKT 476
+ + + I + N+PF E+++ FS FGE+ + +P T +G GF+ F T
Sbjct: 810 QIAKKQKTSKILVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFVT 869
Query: 477 VEAATAAVSASKTTSGLGIFLKGRQLTV--------LKALDKKLA---HDKEIDKSKNE 524
+ A A A ++ L GR+L + L+AL +K A HD K ++E
Sbjct: 870 KQDAKKAFQALCHST----HLYGRRLVLEWADTEETLEALRRKTAQHFHDSPKKKKRSE 924
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+PF + +++ +FS G + ++ P + T KGFAF+ + A A+ +
Sbjct: 404 RLFVRNLPFTSTEEDLEKIFSKYGPLSEIHFPIDKLTKKPKGFAFITYMIPEHAVKALAE 463
Query: 278 FNGQKFGKR 286
+GQ F R
Sbjct: 464 LDGQVFQGR 472
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+F+ NLPF E++++ FS +G + + ++TK+PKG F+ + E A A++
Sbjct: 405 LFVRNLPFTSTEEDLEKIFSKYGPLSEIHFPIDKLTKKPKGFAFITYMIPEHAVKALAEL 464
Query: 488 KTTSGLGIFLKGRQLTVLKALDKK 511
G +GR + +L + +K
Sbjct: 465 D-----GQVFQGRMMHLLPSTIRK 483
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 6 GSNEHRGFGYVQFAVMEDANRAVE-MKNGTSVGGRKIGVKHAMHRASLEQRRSKVTQ 61
G+ HRGFG+V F +DA +A + + + T + GR++ ++ A +LE R K Q
Sbjct: 855 GTGSHRGFGFVDFVTKQDAKKAFQALCHSTHLYGRRLVLEWADTEETLEALRRKTAQ 911
>gi|303285796|ref|XP_003062188.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456599|gb|EEH53900.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 292
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 221 IRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNG 280
+ N+ + +++++F P G V +Y+ N +TG S+GFAFV F K DA AI K +G
Sbjct: 213 VSNLSEDTREQDLQELFRPFGPVTRIYVAFNRETGESRGFAFVNFVNKDDANRAISKLDG 272
Query: 281 QKFGKRPIAVDWAVPK 296
+ + V+WA P+
Sbjct: 273 YGYDNLILRVEWAAPR 288
>gi|17531965|ref|NP_495121.1| Protein TIAR-1, isoform a [Caenorhabditis elegans]
gi|373219010|emb|CCD65015.1| Protein TIAR-1, isoform a [Caenorhabditis elegans]
Length = 408
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 26/185 (14%)
Query: 122 RTVIIGGLLNADMAEEVHRLAGSIGTVCSVTY-------PLPKEELEQHGLAQEGCKMDA 174
RT+ +G L + + + L IG+V P E HG A
Sbjct: 46 RTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGSNDPYAFVEFSDHG--------QA 97
Query: 175 SAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSK---TQKWKLIIRNIPFKAKVN 231
S L T K LL +E+K WA + G + SK T+ + + + ++ +
Sbjct: 98 SQALQTMNKR------LLLDREMK--VNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQ 149
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
++++ F P G V + + +T+T SKG+ FV + + +AE AI++ NGQ G+R I +
Sbjct: 150 KLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTN 209
Query: 292 WAVPK 296
WA K
Sbjct: 210 WATRK 214
>gi|242212568|ref|XP_002472117.1| predicted protein [Postia placenta Mad-698-R]
gi|220728847|gb|EED82733.1| predicted protein [Postia placenta Mad-698-R]
Length = 632
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 126/316 (39%), Gaps = 78/316 (24%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKN--GTSVGGRKIGVKHAMHRASLEQRRSK 58
+V + S +G GYV FA+ EDA A E N G + R + V+ A + Q + K
Sbjct: 54 VVLDQASGVSKGVGYVSFAIREDAQLAYEQINQDGLILDSRNLRVQWAESKLVTTQYKEK 113
Query: 59 VTQEVQA--EDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQ 116
+E A E + K PR A T + +
Sbjct: 114 TQKEPMAKSEPMPKP--------------------------PRPAQT---------NAPR 138
Query: 117 KQRVARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASA 176
RTV I GL ++ ++++ + + V +P+ + G + ++A
Sbjct: 139 DPLAIRTVAISGLPSSVDSKQLWKKIRKLDGAEKVDWPI---------TSANGDEDRSTA 189
Query: 177 -VLYTTVKSACASVALLHQKEIKGGTVWA---RQLGG-------------EGSKTQKW-K 218
L+TT +A +V LH KG + A ++L G +G + +
Sbjct: 190 HALFTTPAAAADAVNKLHAHVFKGSLLSATLKKRLDGLAKAPKTAKAANPKGPAPNRASR 249
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTG------------LSKGFAFVKFT 266
LI+RN+PF +++ +F P G + +V IP D KGFAFV
Sbjct: 250 LIVRNLPFNISEQDLRALFLPYGPIHSVDIPSAVDDAKEEDGEATLQAKRGKGFAFVWML 309
Query: 267 CKRDAESAIQKFNGQK 282
++DAE A+++ NG K
Sbjct: 310 SRKDAERAMEECNGMK 325
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+P+ A ++ +FS + V + ++ + +G+SKG +V F + DA+ A ++
Sbjct: 25 LFVSNLPYTATSIDLNTLFSDIAPVRSAFVVLDQASGVSKGVGYVSFAIREDAQLAYEQI 84
Query: 279 N--GQKFGKRPIAVDWA 293
N G R + V WA
Sbjct: 85 NQDGLILDSRNLRVQWA 101
>gi|38707995|ref|NP_944597.1| probable RNA-binding protein 19 [Danio rerio]
gi|32450902|gb|AAP82506.1| nil per os [Danio rerio]
Length = 926
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Query: 192 LHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN 251
+ ++E+K G A++ K K+++RNIPF+A V E++++F G + V +P
Sbjct: 779 ISEREVKLGVAQAKRKKQTARKQTTSKILVRNIPFQATVKELRELFCTFGELKTVRLPKK 838
Query: 252 TDTGLSKGFAFVKFTCKRDAESAIQKF--NGQKFGKRPIAVDWA 293
G +GF F+ F K+DA+ A + +G+R + ++WA
Sbjct: 839 GIGGSHRGFGFIDFLTKQDAKKAFSALCHSTHLYGRR-LVLEWA 881
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L IRN+P+ ++K++FS G + V P ++ T KGFAFV + +A SA+ +
Sbjct: 399 RLFIRNMPYTCTEEDLKEVFSKHGPLSEVLFPIDSLTKKPKGFAFVTYMIPENAVSALAQ 458
Query: 278 FNGQKFGKRPIAV 290
+GQ F R + V
Sbjct: 459 LDGQTFQGRVLHV 471
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q GE SK ++++N+P +V +++ +FSP G + V +P +GL+ A V+F
Sbjct: 576 QASGERSKCV---ILVKNLPSGVQVADLEALFSPHGSLGRVLLP---PSGLT---AIVEF 626
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLG 325
+A+ A K KF P+ ++WA P ++++ A + ++
Sbjct: 627 LEPTEAKRAFMKLAYTKFQHVPLYLEWA-PVAVFTTPSAPRPEPQTKEKSAVKNDSVQNE 685
Query: 326 DDDAETASDDSNSSEKEDLPSNADFDEEVDI--ARKVLNKLTSTTGSLPS---------- 373
+++ E DD + LP + F + ++ + + L K S G + S
Sbjct: 686 EEEEEEEEDD------QILPGSTLFIKNLNFITSEETLQKTFSKCGVVKSCTISKKRDKA 739
Query: 374 ---LSDDSALVKGNKEQDSDK--------TVNE---SAKVSDVS-KLNSSKSKPKSLKQT 418
LS V+ + + K TV+E K+S+ KL +++K K KQT
Sbjct: 740 GKLLSMGYGFVQYKTPEAAQKAMRQLQHCTVDEHQLEVKISEREVKLGVAQAKRK--KQT 797
Query: 419 EGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVE 478
+ + I + N+PF +E+++ F FGE+ + + +G GF+ F T +
Sbjct: 798 -ARKQTTSKILVRNIPFQATVKELRELFCTFGELKTVRLPKKGIGGSHRGFGFIDFLTKQ 856
Query: 479 AATAAVSA 486
A A SA
Sbjct: 857 DAKKAFSA 864
Score = 42.4 bits (98), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+FI N+P+ E++K+ FS G + + + +TK+PKG F+ + E A +A++
Sbjct: 400 LFIRNMPYTCTEEDLKEVFSKHGPLSEVLFPIDSLTKKPKGFAFVTYMIPENAVSALAQL 459
Query: 488 KTTSGLGIFLKGRQLTVLKALDKKLAHDKEID 519
G +GR L V+ + KK D+ D
Sbjct: 460 D-----GQTFQGRVLHVMASRLKKEKADQGPD 486
>gi|332264173|ref|XP_003281121.1| PREDICTED: ELAV-like protein 1 [Nomascus leucogenys]
Length = 326
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 85/189 (44%), Gaps = 14/189 (7%)
Query: 112 EDCSQKQRVARTVIIGGLLNADMAE-EVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGC 170
+DC + + RT +I L +M + E+ L SIG V S L ++++ H L
Sbjct: 11 DDC--RGDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAK--LIRDKVAGHSLGY--- 63
Query: 171 KMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKV 230
V Y T K A ++ L+ ++ T+ + L I +P
Sbjct: 64 ----GFVNYVTAKDAERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQ 119
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK--FGKRPI 288
+++DMFS G + N + + TGLS+G AF++F + +AE AI FNG K PI
Sbjct: 120 KDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPI 179
Query: 289 AVDWAVPKN 297
V +A N
Sbjct: 180 TVKFAANPN 188
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 113/305 (37%), Gaps = 41/305 (13%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
++ K + G+G+V + +DA RA+ NG + + I V +A R S E +
Sbjct: 51 LIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRLQSKTIKVSYA--RPSSEVIKDA-- 106
Query: 61 QEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQRV 120
+ + +TM KD E S+ G+ + R L D Q +
Sbjct: 107 -NLYISGLPRTMTQKD-----VEDMFSRF---GRIINSRV-------LVD-----QTTGL 145
Query: 121 ARTVIIGGLLNADMAEEV------HRLAGSIGTVCSVTYPLPKEELEQHGLAQ---EGCK 171
+R V AEE H+ GS + P + L+Q +
Sbjct: 146 SRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNVALLSQLYHSPAR 205
Query: 172 MDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVN 231
V + + + + + H + G V G+ + W + I N+ A
Sbjct: 206 RFGGPVHHQAQRFRFSPMGVDHMSGLSGINV-------PGNASSGWCIFIYNLGQDADEG 258
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
+ MF P G V NV + + +T KGF FV T +A AI NG + G + + V
Sbjct: 259 ILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVS 318
Query: 292 WAVPK 296
+ K
Sbjct: 319 FKTNK 323
>gi|168034678|ref|XP_001769839.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678948|gb|EDQ65401.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 133
Score = 62.0 bits (149), Expect = 9e-07, Method: Composition-based stats.
Identities = 34/88 (38%), Positives = 48/88 (54%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL I + + N ++D FS G V V I + DTG S+GF FV FT +AE A+Q+
Sbjct: 46 KLFIGGLAWATDENTLRDAFSSFGTVTEVKIILDRDTGRSRGFGFVNFTSPEEAEVALQE 105
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAA 305
+G++ R I VD+A K + GG
Sbjct: 106 MDGRELAGRQIRVDYATDKARETRGGGG 133
Score = 41.6 bits (96), Expect = 1.6, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+FI L + D ++ FS+FG V +L + T R +G GF+ F + E A A+
Sbjct: 47 LFIGGLAWATDENTLRDAFSSFGTVTEVKIILDRDTGRSRGFGFVNFTSPEEAEVALQEM 106
Query: 488 KTTSGLGIFLKGRQLTVLKALDK 510
G L GRQ+ V A DK
Sbjct: 107 D-----GRELAGRQIRVDYATDK 124
>gi|72383177|ref|YP_292532.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. NATL2A]
gi|72003027|gb|AAZ58829.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. NATL2A]
Length = 250
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + N+PF+A+ ++ ++FSP G V N +P DTG +GFAFV+ + SAI+
Sbjct: 3 IFVGNLPFRAEQEDVMELFSPFGEVSNCSLPLERDTGRKRGFAFVEMADEAVEASAIESL 62
Query: 279 NGQKFGKRPIAVDWAVPK 296
G + RP+ ++ A P+
Sbjct: 63 QGAELMGRPLRINKAEPR 80
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
+IF+ NLPF + E+V + FS FGEV + L + T R +G F VE A AV A
Sbjct: 2 SIFVGNLPFRAEQEDVMELFSPFGEVSNCSLPLERDTGRKRG-----FAFVEMADEAVEA 56
Query: 487 SKTTSGLGIFLKGRQLTVLKA 507
S S G L GR L + KA
Sbjct: 57 SAIESLQGAELMGRPLRINKA 77
>gi|124024725|ref|YP_001013841.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. NATL1A]
gi|123959793|gb|ABM74576.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. NATL1A]
Length = 250
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + N+PF+A+ ++ ++FSP G V N +P DTG +GFAFV+ + SAI+
Sbjct: 3 IFVGNLPFRAEQEDVMELFSPFGEVSNCSLPLERDTGRKRGFAFVEMADEAVEASAIESL 62
Query: 279 NGQKFGKRPIAVDWAVPK 296
G + RP+ ++ A P+
Sbjct: 63 QGAELMGRPLRINKAEPR 80
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
+IF+ NLPF + E+V + FS FGEV + L + T R +G F VE A AV A
Sbjct: 2 SIFVGNLPFRAEQEDVMELFSPFGEVSNCSLPLERDTGRKRG-----FAFVEMADEAVEA 56
Query: 487 SKTTSGLGIFLKGRQLTVLKA 507
S S G L GR L + KA
Sbjct: 57 SAIESLQGAELMGRPLRINKA 77
>gi|1655901|gb|AAB17967.1| elav G homolog [Mus musculus]
Length = 326
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 14/189 (7%)
Query: 112 EDCSQKQRVARTVIIGGLLNADMA-EEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGC 170
EDC + + RT +I L +M EE+ L SIG V S L ++++ H L
Sbjct: 11 EDC--RGDIGRTNLIVNYLPQNMTQEELRSLFSSIGEVESAK--LIRDKVAGHSLGY--- 63
Query: 171 KMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKV 230
V Y T K A +++ L+ ++ T+ + L I +P
Sbjct: 64 ----GFVNYVTAKDAERAISTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQ 119
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK--FGKRPI 288
+++DMFS G + N + + TGLS+G AF++F + +AE AI F G K PI
Sbjct: 120 KDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFIGHKPPGSSEPI 179
Query: 289 AVDWAVPKN 297
V +A N
Sbjct: 180 TVKFAANPN 188
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 114/300 (38%), Gaps = 29/300 (9%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
++ K + G+G+V + +DA RA+ NG + + I V +A R S E +
Sbjct: 51 LIRDKVAGHSLGYGFVNYVTAKDAERAISTLNGLRLQSKTIKVSYA--RPSSEVIKDA-- 106
Query: 61 QEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQRV 120
+ + +TM KD + +++ S V + G+ + S+ +
Sbjct: 107 -NLYISGLPRTMTQKD--VEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEE- 162
Query: 121 ARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQ---EGCKMDASAV 177
A T IG H+ GS + P + L+Q + V
Sbjct: 163 AITSFIG-----------HKPPGSSEPITVKFAANPNQNKNMALLSQLYHSPARRFGGPV 211
Query: 178 LYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMF 237
+ + + + + H I G V G+ + W + I N+ A + MF
Sbjct: 212 HHQAQRFRFSPMGVDHMSGISGVNV-------PGNASSGWCIFIYNLGQDADEGILWQMF 264
Query: 238 SPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKN 297
P G V NV + + +T KGF FV T ++ AI NG + G + + V + K+
Sbjct: 265 GPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEESAMAIASLNGYRLGDKILQVSFKTNKS 324
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
LI+ +P E++ +FS +G V + + + G S G+ FV + +DAE AI
Sbjct: 22 LIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTL 81
Query: 279 NGQKFGKRPIAVDWAVPK-------NIYSSG 302
NG + + I V +A P N+Y SG
Sbjct: 82 NGLRLQSKTIKVSYARPSSEVIKDANLYISG 112
>gi|167387943|ref|XP_001738374.1| RNA-binding protein [Entamoeba dispar SAW760]
gi|165898469|gb|EDR25317.1| RNA-binding protein, putative [Entamoeba dispar SAW760]
Length = 417
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 134/285 (47%), Gaps = 35/285 (12%)
Query: 382 KGNKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEE 441
KG K++++++ + K D L S+ + + L + ED++ TIFI NL F EE
Sbjct: 58 KGKKQRNTERKEEKQEKRFDRKGL--SREEKEELHK---EDQIYRTIFIQNLSFRTTEEE 112
Query: 442 VKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSG---LGIFLK 498
+K++ +G+V + + +GTGF+ F+ A + + SG I +
Sbjct: 113 LKEKMGEYGDVSYCKICMDKEKGISRGTGFVCFRKRGVADKIIEEAYMFSGNKESDIEID 172
Query: 499 GRQLTVLKALDKKLAHDKEIDKSKNE----TNDHRNLYLAKEGLILEGTPAAEGVSDDDM 554
GR+L + KA+ K+ A KE SK + D+RN+ LA G + G++ ++
Sbjct: 173 GRRLILQKAIKKEQA--KETSDSKKKKKEGIKDNRNVSLAMVGQKTKEEYLQLGLTPNEA 230
Query: 555 SKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKS----MTEKGLKKLCIDAVVSRASKQK 610
R ++ KL++ NF V++ R+ + N+PK+ M + K C+ +S
Sbjct: 231 KIRLKAQMERNKKLKNVNFCVNKYRVCVRNIPKNSNKKMIMETFGKYCMKGKIS------ 284
Query: 611 PVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLN 655
IK ++ ++GK + G F+ FTE + A + +N
Sbjct: 285 ----DIKIIKG-ERGK------AIGYCFLTFTEAEDAYQFVEKVN 318
>gi|299531903|ref|ZP_07045303.1| RNA-binding protein RNP-3 [Comamonas testosteroni S44]
gi|298720078|gb|EFI61035.1| RNA-binding protein RNP-3 [Comamonas testosteroni S44]
Length = 162
Score = 62.0 bits (149), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL + N+P+ + N+++ FS G V + + DTG SKGF FV+ + +A++AIQ
Sbjct: 4 KLYVGNLPYGVRDNDLEQAFSQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAAIQG 63
Query: 278 FNGQKFGKRPIAVDWAVPKNIY--SSGGAAAGVQNK 311
NGQ G R + V+ A P SGG G +++
Sbjct: 64 MNGQPLGGRSLVVNEARPMEPRPPRSGGYGGGFRSE 99
Score = 45.4 bits (106), Expect = 0.11, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 424 LQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAA 483
+ N +++ NLP+ + + +++Q FS FG V S ++ + T R KG GF++ + A AA
Sbjct: 1 MGNKLYVGNLPYGVRDNDLEQAFSQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAA 60
Query: 484 VSASKTTSGLGIFLKGRQLTVLKA 507
+ G L GR L V +A
Sbjct: 61 IQGMN-----GQPLGGRSLVVNEA 79
>gi|264680852|ref|YP_003280762.1| RNA-binding protein RNP-3 [Comamonas testosteroni CNB-2]
gi|262211368|gb|ACY35466.1| RNA-binding protein RNP-3 [Comamonas testosteroni CNB-2]
Length = 164
Score = 62.0 bits (149), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL + N+P+ + N+++ FS G V + + DTG SKGF FV+ + +A++AIQ
Sbjct: 4 KLYVGNLPYGVRDNDLEQAFSQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAAIQG 63
Query: 278 FNGQKFGKRPIAVDWAVPKNIY--SSGGAAAGVQNK 311
NGQ G R + V+ A P SGG G +++
Sbjct: 64 MNGQPLGGRSLVVNEARPMEPRPPRSGGYGGGFRSE 99
Score = 45.4 bits (106), Expect = 0.11, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 424 LQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAA 483
+ N +++ NLP+ + + +++Q FS FG V S ++ + T R KG GF++ + A AA
Sbjct: 1 MGNKLYVGNLPYGVRDNDLEQAFSQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAA 60
Query: 484 VSASKTTSGLGIFLKGRQLTVLKA 507
+ G L GR L V +A
Sbjct: 61 IQGMN-----GQPLGGRSLVVNEA 79
>gi|301779826|ref|XP_002925333.1| PREDICTED: probable RNA-binding protein 19-like [Ailuropoda
melanoleuca]
Length = 963
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A EI+++FS G + V +P T TG +GF FV F K+DA+ A Q
Sbjct: 814 KILVRNIPFQADSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFQ 873
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 874 ALCHSTHLYGRR-LVLEWA 891
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 131/313 (41%), Gaps = 51/313 (16%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q E SKT ++++N+P E+++ F G + V +P T A V+F
Sbjct: 581 QAAAERSKTV---ILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGVT------AIVEF 631
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGG----------AAAGVQNKGDGN 315
+A A + KF P+ ++WA P ++SS A +++ +
Sbjct: 632 VEPLEARKAFRHLAYSKFHHAPLYLEWA-PVGVFSSSAPQTKEPKDPPAGPAGEDRAEPE 690
Query: 316 SDSGSDDDLGDDDAETASDDSNS------SEKEDLPSNADFDEEVDI--ARKVLNKLTST 367
+ + G+ AE +++ + E+E LP A F + ++ + L ++ S
Sbjct: 691 TLPDHETPEGEKPAEGGAENCPAKVEEEEEEEESLPGCALFIKNLNFNTTEETLKEVFSK 750
Query: 368 TGSLPS-------------LSDDSALVKGNKEQDSDKTVNESAKVSDVSKLNSSKSKPKS 414
G++ S LS V+ K + + K + + + L S++ K
Sbjct: 751 VGTVRSCSISKKKNKAGAMLSMGFGFVEYRKPEQAQKALKQ---LQVRPALTSARKKQVL 807
Query: 415 LKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VPVLHQVTKRPKGTGFLK 473
KQT + I + N+PF D+ E+++ FS FGE+ + +P T +G GF+
Sbjct: 808 RKQT------TSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVD 861
Query: 474 FKTVEAATAAVSA 486
F T + A A A
Sbjct: 862 FLTKQDAKRAFQA 874
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 413 KSLKQTEGEDELQNT--IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTG 470
++L + E E++L ++ +FI NLP+ E+++Q FS FG + + +TK+PKG
Sbjct: 389 RTLGENEEEEDLADSGRLFIRNLPYTSTEEDLEQLFSKFGPLSELHYPIDSLTKKPKGFA 448
Query: 471 FLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHD 515
F+ F E A A + G +GR L VL + KK A +
Sbjct: 449 FVTFMFPEHAVRAYAEVD-----GQVFQGRMLHVLPSTIKKEASE 488
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L IRN+P+ + +++ +FS G + ++ P ++ T KGFAFV F A A +
Sbjct: 405 RLFIRNLPYTSTEEDLEQLFSKFGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVRAYAE 464
Query: 278 FNGQKFGKRPIAV 290
+GQ F R + V
Sbjct: 465 VDGQVFQGRMLHV 477
Score = 39.3 bits (90), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 6 GSNEHRGFGYVQFAVMEDANRAVE-MKNGTSVGGRKIGVKHAMHRASLEQRRSKVTQ 61
G+ HRGFG+V F +DA RA + + + T + GR++ ++ A SL+ R K +
Sbjct: 850 GTGTHRGFGFVDFLTKQDAKRAFQALCHSTHLYGRRLVLEWADSEVSLQTLRRKTAE 906
>gi|281343470|gb|EFB19054.1| hypothetical protein PANDA_014807 [Ailuropoda melanoleuca]
Length = 947
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A EI+++FS G + V +P T TG +GF FV F K+DA+ A Q
Sbjct: 820 KILVRNIPFQADSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFQ 879
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 880 ALCHSTHLYGRR-LVLEWA 897
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 136/322 (42%), Gaps = 51/322 (15%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q E SKT ++++N+P E+++ F G + V +P T A V+F
Sbjct: 569 QAAAERSKTV---ILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGVT------AIVEF 619
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGG----------AAAGVQNKGDGN 315
+A A + KF P+ ++WA P ++SS A +++ +
Sbjct: 620 VEPLEARKAFRHLAYSKFHHAPLYLEWA-PVGVFSSSAPQTKEPKDPPAGPAGEDRAEPE 678
Query: 316 SDSGSDDDLGDDDAETASDDSNS------SEKEDLPSNADFDEEVDI--ARKVLNKLTST 367
+ + G+ AE +++ + E+E LP A F + ++ + L ++ S
Sbjct: 679 TLPDHETPEGEKPAEGGAENCPAKVEEEEEEEESLPGCALFIKNLNFNTTEETLKEVFSK 738
Query: 368 TGSLPS-------------LSDDSALVKGNKEQDSDKTVNE----SAKVSDVSKLNS--S 408
G++ S LS V+ K + + K + + +A ++ LNS
Sbjct: 739 VGTVRSCSISKKKNKAGAMLSMGFGFVEYRKPEQAQKALKQLQVRAAVAYTLNNLNSFLQ 798
Query: 409 KSKP---KSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VPVLHQVTK 464
S+P + K+ + + I + N+PF D+ E+++ FS FGE+ + +P T
Sbjct: 799 PSRPALTSARKKQVLRKQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKMTGTG 858
Query: 465 RPKGTGFLKFKTVEAATAAVSA 486
+G GF+ F T + A A A
Sbjct: 859 THRGFGFVDFLTKQDAKRAFQA 880
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 413 KSLKQTEGEDELQNT--IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTG 470
++L + E E++L ++ +FI NLP+ E+++Q FS FG + + +TK+PKG
Sbjct: 377 RTLGENEEEEDLADSGRLFIRNLPYTSTEEDLEQLFSKFGPLSELHYPIDSLTKKPKGFA 436
Query: 471 FLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHD 515
F+ F E A A + G +GR L VL + KK A +
Sbjct: 437 FVTFMFPEHAVRAYAEVD-----GQVFQGRMLHVLPSTIKKEASE 476
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L IRN+P+ + +++ +FS G + ++ P ++ T KGFAFV F A A +
Sbjct: 393 RLFIRNLPYTSTEEDLEQLFSKFGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVRAYAE 452
Query: 278 FNGQKFGKRPIAV 290
+GQ F R + V
Sbjct: 453 VDGQVFQGRMLHV 465
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 6 GSNEHRGFGYVQFAVMEDANRAVE-MKNGTSVGGRKIGVKHAMHRASLEQRRSKVTQ 61
G+ HRGFG+V F +DA RA + + + T + GR++ ++ A SL+ R K +
Sbjct: 856 GTGTHRGFGFVDFLTKQDAKRAFQALCHSTHLYGRRLVLEWADSEVSLQTLRRKTAE 912
>gi|124513886|ref|XP_001350299.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23615716|emb|CAD52708.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 509
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL I ++P + IK+MFSP G V V+I + TGL KG +FVKF+ K A AI+
Sbjct: 185 KLFIGSLPKNITEDNIKEMFSPYGTVEEVFIMKDNSTGLGKGCSFVKFSYKEQALYAIKS 244
Query: 278 FNGQKFGK---RPIAVDWAVPK 296
NG+K + RP+ V +A PK
Sbjct: 245 LNGKKTLEGCTRPVEVRFAEPK 266
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 15/86 (17%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
+FI ++P + ++ Q FS FGE++S + T R +G F+ + ++E+A AA+S
Sbjct: 370 NLFIFHVPNEWQQTDLIQAFSPFGELLSARIATEKNTGRNRGFAFVSYDSLESAAAAIS- 428
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKL 512
Q+ AL+KKL
Sbjct: 429 --------------QMNGFMALNKKL 440
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L I ++P + + ++ FSP G + + I +TG ++GFAFV + A +AI +
Sbjct: 371 LFIFHVPNEWQQTDLIQAFSPFGELLSARIATEKNTGRNRGFAFVSYDSLESAAAAISQM 430
Query: 279 NG 280
NG
Sbjct: 431 NG 432
>gi|440910206|gb|ELR60031.1| ELAV-like protein 1, partial [Bos grunniens mutus]
Length = 330
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 12/181 (6%)
Query: 120 VARTVIIGGLLNADMAE-EVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVL 178
+ RT +I L +M + E+ L SIG V S L ++++ H L V
Sbjct: 2 IGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAK--LIRDKVAGHSLGY-------GFVN 52
Query: 179 YTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFS 238
Y T K A ++ L+ ++ T+ + L I +P +++DMFS
Sbjct: 53 YVTAKDAERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRNMTQKDVEDMFS 112
Query: 239 PVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK--FGKRPIAVDWAVPK 296
G + N + + TGLS+G AF++F + +AE AI FNG K PI V +A
Sbjct: 113 RFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANP 172
Query: 297 N 297
N
Sbjct: 173 N 173
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%)
Query: 211 GSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRD 270
G+ + W + I N+ A + MF P G V NV + + +T KGF FV T +
Sbjct: 242 GNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEE 301
Query: 271 AESAIQKFNGQKFGKRPIAVDWAVPK 296
A AI NG + G + + V + K
Sbjct: 302 AAMAIASLNGYRLGDKILQVSFKTNK 327
>gi|389746476|gb|EIM87656.1| translation initiation factor 3 RNA-binding subunit [Stereum
hirsutum FP-91666 SS1]
Length = 298
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%)
Query: 208 GGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTC 267
GG G++ L + NI + N+++D+F G V VY+ + +TG+ KGFAFV F
Sbjct: 207 GGAGNRDDLPTLRVTNISEDTQENDLRDLFGTFGRVARVYVGRDRETGIGKGFAFVSFED 266
Query: 268 KRDAESAIQKFNGQKFGKRPIAVDWAVPK 296
K A+ A+ K +G+ + + V W+ P+
Sbjct: 267 KSTAQKAMDKMHGRGYDSLILNVQWSQPR 295
>gi|326516784|dbj|BAJ96384.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 283
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 66/125 (52%), Gaps = 8/125 (6%)
Query: 177 VLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQK--------WKLIIRNIPFKA 228
V +T++ A ++ ++ +I G + + GS+ ++ ++ + N+P++A
Sbjct: 151 VTMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRRFASSFRAYVGNLPWQA 210
Query: 229 KVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPI 288
+ + + MFS G V N I ++ +TG S+GF FV K D +SAI +GQ+ RP+
Sbjct: 211 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 270
Query: 289 AVDWA 293
V+ A
Sbjct: 271 RVNVA 275
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQR 55
++ + S + RGFG+V + +E+A++A+E N + GR + V A R S +R
Sbjct: 136 VIYNRESGQSRGFGFVTMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVER 190
>gi|225449547|ref|XP_002283722.1| PREDICTED: uncharacterized protein LOC100258210 [Vitis vinifera]
Length = 276
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L++RNIP + +++ F GLV +VY+P + TG +GFAFV+F +A A
Sbjct: 42 LLVRNIPLNCRPEDLRVPFERFGLVRDVYLPKDYYTGEPRGFAFVQFVDPYEASEAQYHM 101
Query: 279 NGQKFGKRPIAV 290
NGQ F R I+V
Sbjct: 102 NGQIFAGREISV 113
>gi|326527719|dbj|BAK08134.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 283
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 66/125 (52%), Gaps = 8/125 (6%)
Query: 177 VLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQK--------WKLIIRNIPFKA 228
V +T++ A ++ ++ +I G + + GS+ ++ ++ + N+P++A
Sbjct: 151 VTMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQA 210
Query: 229 KVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPI 288
+ + + MFS G V N I ++ +TG S+GF FV K D +SAI +GQ+ RP+
Sbjct: 211 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 270
Query: 289 AVDWA 293
V+ A
Sbjct: 271 RVNVA 275
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQR 55
++ + S + RGFG+V + +E+A++A+E N + GR + V A R S +R
Sbjct: 136 VIYNRESGQSRGFGFVTMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVER 190
>gi|256075727|ref|XP_002574168.1| elav (embryonic lethal abnormal vision drosophila)-like protein
[Schistosoma mansoni]
Length = 517
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 115/276 (41%), Gaps = 37/276 (13%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L I +P K NE++ +FS G + I ++ TG+S+G AF++F + +AE AIQ+
Sbjct: 78 LYISGLPKTMKQNELEQLFSQYGRIITARILYDNKTGISRGVAFIRFNHRYEAELAIQQL 137
Query: 279 NGQKFG--------KRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAE 330
NG + RPI V +A P N S D +
Sbjct: 138 NGYQLPFEYSNDILNRPITVKFANPPN--------------------SIKLDYFSLLLLK 177
Query: 331 TASDDSNSSEKEDLPS-NADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDS 389
A+ ++ PS NA IA ++LN L + ++S+ +K + S
Sbjct: 178 QAAQLKAVAKSAATPSPNAT---SAVIAAELLNPLQQQQQRIATISNR---LKYSMTSSS 231
Query: 390 DKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAF 449
+ + + + +N+S P + T G IF+ NL +++ + F F
Sbjct: 232 STETDLLSTMVNTIGINNSILAPTIIASTGGLTPNGWCIFVYNLSPEVEESNLWHLFGPF 291
Query: 450 GEVVSFVPVLHQVT-KRPKGTGFLKFKTVEAATAAV 484
G V S + +++ +T + KG F+ E A A+
Sbjct: 292 GAVQS-IKIIYDITNNKCKGFAFVTMSNYEEAVLAI 326
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
E++ +FS G + + + + TG S G+AFVK++ +A+ AI K NG + I V
Sbjct: 5 EVRVLFSTCGQIESCKLIRDKLTGESLGYAFVKYSHSNEAQQAIHKLNGLSLQNKTIKVS 64
Query: 292 WAVPK-------NIYSSGGAAAGVQNK 311
A P N+Y SG QN+
Sbjct: 65 LARPNCESIKGANLYISGLPKTMKQNE 91
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 38/81 (46%)
Query: 217 WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
W + + N+ + + + + +F P G V ++ I ++ KGFAFV + +A AI
Sbjct: 268 WCIFVYNLSPEVEESNLWHLFGPFGAVQSIKIIYDITNNKCKGFAFVTMSNYEEAVLAIH 327
Query: 277 KFNGQKFGKRPIAVDWAVPKN 297
NG R + V + + N
Sbjct: 328 SLNGYVLDNRILQVSFKITNN 348
>gi|418528344|ref|ZP_13094294.1| RNA-binding protein RNP-3 [Comamonas testosteroni ATCC 11996]
gi|371454720|gb|EHN67722.1| RNA-binding protein RNP-3 [Comamonas testosteroni ATCC 11996]
Length = 163
Score = 61.6 bits (148), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 46/78 (58%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL + N+P+ + N+++ FS G V + + DTG SKGF FV+ + +A++AIQ
Sbjct: 4 KLYVGNLPYGVRDNDLEQAFSQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAAIQG 63
Query: 278 FNGQKFGKRPIAVDWAVP 295
NGQ G R + V+ A P
Sbjct: 64 MNGQPLGGRSLVVNEARP 81
Score = 45.4 bits (106), Expect = 0.098, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 424 LQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAA 483
+ N +++ NLP+ + + +++Q FS FG V S ++ + T R KG GF++ + A AA
Sbjct: 1 MGNKLYVGNLPYGVRDNDLEQAFSQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAA 60
Query: 484 VSASKTTSGLGIFLKGRQLTVLKA 507
+ G L GR L V +A
Sbjct: 61 IQGMN-----GQPLGGRSLVVNEA 79
>gi|326427558|gb|EGD73128.1| hypothetical protein PTSG_04841 [Salpingoeca sp. ATCC 50818]
Length = 285
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%)
Query: 217 WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
+KL + N+ + KV+++++ F G V +V++P + TG +GF FV F + +AE A +
Sbjct: 80 YKLFVGNLNYDTKVSDMEEAFGKFGKVKDVFLPMHRVTGTCRGFGFVTFADRTEAEDAEK 139
Query: 277 KFNGQKFGKRPIAVDWAVPK 296
NG F R +AV++A P+
Sbjct: 140 GMNGTTFLGREVAVNFARPR 159
>gi|126324467|ref|XP_001378428.1| PREDICTED: probable RNA-binding protein 19 [Monodelphis domestica]
Length = 969
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A V EI+++FS G + V +P T TG +GF FV F K+DA+ A
Sbjct: 816 KILVRNIPFQANVREIRELFSTFGELKTVRLPKKMTGTGPHRGFGFVDFLTKQDAKRAFN 875
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 876 ALCHSTHLYGRR-LVLEWA 893
Score = 45.4 bits (106), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 80/377 (21%), Positives = 153/377 (40%), Gaps = 82/377 (21%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q GE S++ ++++N+P + +E++++F G + V +P T A V++
Sbjct: 565 QAAGERSRSV---ILVKNLPSGTRPSELQELFGRFGSLGRVLLPEGGIT------AIVEY 615
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDG-----NSDSGS 320
+A KF P+ ++WA P ++SS + Q G S++G
Sbjct: 616 LEPLEARRGFTSLAYSKFHDVPLYLEWA-PIGVFSSHPSPKKEQGDEPGGKEATQSEAGP 674
Query: 321 DDDLGDDDAETASDDSNSSEKE-DLPS--------------------NADFDEEVDIARK 359
D G+ E + + EK+ D PS N +F + ++
Sbjct: 675 D---GETTEEAEKRAAVAPEKKLDAPSEEDDDDDDEEGLPGCTLFIKNLNFSTTEETLKE 731
Query: 360 VLNKLTSTTG---------SLPSLSDDSALVKGNKEQDSDKTVNE-----------SAKV 399
+K+ + SLS V+ K + + K + + ++
Sbjct: 732 AFSKVGKVKNCSISKKKNKAGVSLSMGFGFVEYQKPEQAQKALKQLQGCMVDDHKLEVRI 791
Query: 400 SDVS---KLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF- 455
S+ + L S++ K + KQ + I + N+PF + E+++ FS FGE+ +
Sbjct: 792 SERAVKPALTSARQKQVARKQR------TSKILVRNIPFQANVREIRELFSTFGELKTVR 845
Query: 456 VPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV--------LKA 507
+P T +G GF+ F T + A A +A ++ L GR+L + ++A
Sbjct: 846 LPKKMTGTGPHRGFGFVDFLTKQDAKRAFNALCHST----HLYGRRLVLEWADTEETVQA 901
Query: 508 LDKKLA-HDKEIDKSKN 523
L +K A H E+ + +
Sbjct: 902 LRRKTAQHFHEVPRKRQ 918
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+P+ + +++ +F+ G + V+ P + T KGFAF+ F A A +
Sbjct: 390 RLFVRNLPYTSTEEDLEKLFAKYGPLSEVHYPIDGLTKKPKGFAFITFMFPEHAVKAYAE 449
Query: 278 FNGQKFGKR 286
+GQ F R
Sbjct: 450 VDGQIFQGR 458
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+F+ NLP+ E++++ F+ +G + + +TK+PKG F+ F E A A +
Sbjct: 391 LFVRNLPYTSTEEDLEKLFAKYGPLSEVHYPIDGLTKKPKGFAFITFMFPEHAVKAYAEV 450
Query: 488 KTTSGLGIFLKGRQLTVLKALDKK 511
G +GR L +L + KK
Sbjct: 451 D-----GQIFQGRMLHLLPSTIKK 469
>gi|209880680|ref|XP_002141779.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209557385|gb|EEA07430.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 313
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 6/82 (7%)
Query: 217 WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAES--- 273
+ I+ N+ F A +E++++ S VG V ++ I ++ DTGLS+GF+F ++ RD E+
Sbjct: 2 YIFIVGNVAFDATEDELREVMSAVGPVLSIRIVYDKDTGLSRGFSFCEY---RDIETCIM 58
Query: 274 AIQKFNGQKFGKRPIAVDWAVP 295
AI+ NG + R I VDW P
Sbjct: 59 AIKNLNGYELRGRAIRVDWTSP 80
>gi|297797433|ref|XP_002866601.1| hypothetical protein ARALYDRAFT_496619 [Arabidopsis lyrata subsp.
lyrata]
gi|297312436|gb|EFH42860.1| hypothetical protein ARALYDRAFT_496619 [Arabidopsis lyrata subsp.
lyrata]
Length = 305
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 48/77 (62%)
Query: 217 WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
+ L++ NI F+ +++ +F+ G V +V+IP + TG S+GFAFV++ K +A A++
Sbjct: 16 YSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVE 75
Query: 277 KFNGQKFGKRPIAVDWA 293
+ +G+ R I V +A
Sbjct: 76 RLDGRVVDGREITVQFA 92
>gi|168056189|ref|XP_001780104.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668507|gb|EDQ55113.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 288
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 46/76 (60%)
Query: 221 IRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNG 280
+ N+ + +++++FSP G + +Y+ + +TGLS+GFAF+ F + DA AI K +G
Sbjct: 209 VTNLSEDTREQDLQELFSPFGSISRIYVAFDRETGLSRGFAFINFVNRDDAIRAINKLDG 268
Query: 281 QKFGKRPIAVDWAVPK 296
+ + V+WA P+
Sbjct: 269 YGYDNLILRVEWATPR 284
>gi|388326834|pdb|4ED5|A Chain A, Crystal Structure Of The Two N-Terminal Rrm Domains Of Hur
Complexed With Rna
gi|388326835|pdb|4ED5|B Chain B, Crystal Structure Of The Two N-Terminal Rrm Domains Of Hur
Complexed With Rna
Length = 177
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 79/175 (45%), Gaps = 12/175 (6%)
Query: 122 RTVIIGGLLNADMAE-EVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVLYT 180
RT +I L +M + E+ L SIG V S L ++++ H L V Y
Sbjct: 2 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAK--LIRDKVAGHSLGY-------GFVNYV 52
Query: 181 TVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPV 240
T K A ++ L+ ++ T+ + L I +P +++DMFS
Sbjct: 53 TAKDAERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRF 112
Query: 241 GLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK--FGKRPIAVDWA 293
G + N + + TGLS+G AF++F + +AE AI FNG K PI V +A
Sbjct: 113 GRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 167
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 216 KWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAI 275
+ LI+ +P +E++ +FS +G V + + + G S G+ FV + +DAE AI
Sbjct: 2 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAI 61
Query: 276 QKFNGQKFGKRPIAVDWAVPK-------NIYSSG 302
NG + + I V +A P N+Y SG
Sbjct: 62 NTLNGLRLQSKTIKVSYARPSSEVIKDANLYISG 95
>gi|298708065|emb|CBJ30418.1| RNA-binding protein, putative [Ectocarpus siliculosus]
Length = 192
Score = 61.6 bits (148), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 5/100 (5%)
Query: 208 GGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTC 267
GG + W L +RN+ +A+ ++I D FS G V N+++ + TG KG+ V+F
Sbjct: 92 GGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDRRTGFVKGYCLVEFEK 151
Query: 268 KRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAG 307
K +A+SAI + +G + ++ I+V WA + GG AG
Sbjct: 152 KEEAQSAIDEMDGSQLLEQDISVSWA-----FMRGGKGAG 186
>gi|302818104|ref|XP_002990726.1| hypothetical protein SELMODRAFT_185536 [Selaginella moellendorffii]
gi|300141464|gb|EFJ08175.1| hypothetical protein SELMODRAFT_185536 [Selaginella moellendorffii]
Length = 738
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KLI+RN+ F+A ++K +FSP G V V +P D G +GFAFV+F K++A++A +
Sbjct: 635 KLIVRNVAFEATRKDLKLLFSPFGQVKKVKLPKKFD-GNHRGFAFVEFVTKQEAQNAFEA 693
Query: 278 FNGQKFGKRPIAVDWA 293
R + ++WA
Sbjct: 694 LGSSHLYGRHLVLEWA 709
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 158/384 (41%), Gaps = 66/384 (17%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
++ ++N+P +++K+ F G V + + T G S+ F FV F + +AESA+
Sbjct: 6 RVCVKNLPAYVTDDKLKEHFGAKGQVTDAKV-MRTREGKSRRFGFVGFYSQEEAESAVAY 64
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDDSN 337
FN + + A S G AA ++ S + ++ A+ +
Sbjct: 65 FNRSFLDTSRLVCEVA-----RSVGDAAVRPWSRHSKGSSAYEKTHAPEEKAQLKPKKTV 119
Query: 338 SSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTVNESA 397
S ++ D + DE L+ + T + +DD+ L + S K +++
Sbjct: 120 SVDR-DQEQDPGLDE-------FLSVMQPRTKTKVWANDDAKL---TTQHPSSKASDDTG 168
Query: 398 KVSDVSKLNSSKSKPKS-----LKQTEGEDELQNT-----------------------IF 429
VSD+ L S + S K+TEGE + Q +F
Sbjct: 169 PVSDLHYLKSKVRQQWSDDSDDEKETEGEAKPQQQADTGDRPGNEEAAQDVAETDTGRLF 228
Query: 430 ICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKT 489
+ NL + EE+ F +GEVV + + T R KG G++ F E AT A++
Sbjct: 229 VRNLAYTTSEEELVSLFGQYGEVVQVHVICDKETNRSKGYGYVGFMLPEEATRAMTELDN 288
Query: 490 TSGLGIFLKGRQLTVLKA----------LDK--KLAHDKEIDKSKNETNDHRNLYLAKEG 537
+ IF +GR L VL A LD+ L ++E+++ K E++ + +
Sbjct: 289 S----IF-QGRLLHVLPAKQQTSQVKHKLDRPMNLKQEREVERKKKESSGNTQAW---NP 340
Query: 538 LILEGTPAAEGVSDD-DMSKRQML 560
L + AE V+ +S+R+ L
Sbjct: 341 LYMRPDTVAENVARQYGISRREFL 364
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 128/316 (40%), Gaps = 63/316 (19%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
++ K +N +G+GYV F + E+A RA+ + + GR + V A + S Q + K+
Sbjct: 256 VICDKETNRSKGYGYVGFMLPEEATRAMTELDNSIFQGRLLHVLPAKQQTS--QVKHKLD 313
Query: 61 QEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQRV 120
+ + + E+ ++ K SG + + L TV A GI S+++
Sbjct: 314 RPMNLKQ-EREVERKKKESSGNTQAWNPLYMRPDTVAENVARQYGI--------SRRE-- 362
Query: 121 ARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVLYT 180
L+ + + RLA V S T + LAQ+G ++ L
Sbjct: 363 --------FLDPEAEDVAVRLALGETHVLSET---------KRSLAQQGVNVE----LLE 401
Query: 181 TVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPV 240
+ ++ S G T +R + +++N+PF ++ +F P
Sbjct: 402 KISASKTS----------GVTRSSRVI------------LVKNLPFSTTEADLFGVFCPY 439
Query: 241 GLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYS 300
G + + +P +K A V+F +A A + +KF P+ ++WA P+++ S
Sbjct: 440 GSLGRLVLPP------TKTVAIVEFLESSEARKAFESLAYRKFKHVPLYLEWA-PQDLLS 492
Query: 301 SGGAAAGVQNKGDGNS 316
V K +G S
Sbjct: 493 EKKDGGVVPAKLEGTS 508
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 39/79 (49%)
Query: 212 SKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDA 271
++T +L +RN+ + E+ +F G V V++ + +T SKG+ +V F +A
Sbjct: 220 AETDTGRLFVRNLAYTTSEEELVSLFGQYGEVVQVHVICDKETNRSKGYGYVGFMLPEEA 279
Query: 272 ESAIQKFNGQKFGKRPIAV 290
A+ + + F R + V
Sbjct: 280 TRAMTELDNSIFQGRLLHV 298
>gi|119492702|ref|XP_001263670.1| ribonucleoprotein, chloroplast [Neosartorya fischeri NRRL 181]
gi|119411830|gb|EAW21773.1| ribonucleoprotein, chloroplast [Neosartorya fischeri NRRL 181]
Length = 533
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 204 ARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFV 263
AR G + S L + NIPF A + + ++F G + + +P + ++G KGF +V
Sbjct: 383 ARNFGDQASPESD-TLFVGNIPFSANEDSVSELFGQSGTIVGIRLPTDPESGRPKGFGYV 441
Query: 264 KFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPK 296
+F+ +A A NG + RP+ +D++ P+
Sbjct: 442 QFSSVDEARQAFNDLNGAELNGRPVRLDFSTPR 474
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAA 483
+T+F+ N+PF + + V + F G +V + RPKG G+++F +V+ A A
Sbjct: 395 DTLFVGNIPFSANEDSVSELFGQSGTIVGIRLPTDPESGRPKGFGYVQFSSVDEARQA 452
>gi|66362022|ref|XP_627975.1| cleavage stimulation factor subunit 2 that has a CSF1 like RRM
domain [Cryptosporidium parvum Iowa II]
gi|46227640|gb|EAK88575.1| cleavage stimulation factor subunit 2 that has a CSF1 like RRM
domain [Cryptosporidium parvum Iowa II]
Length = 304
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 6/77 (7%)
Query: 220 IIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAES---AIQ 276
++ N+PF A +E++++ + G V ++ I H+ DTGLS+GF+F ++ RD E+ AI+
Sbjct: 5 LVGNVPFDATEDELREVMNSAGPVLSMRIVHDKDTGLSRGFSFCEY---RDIETCIMAIK 61
Query: 277 KFNGQKFGKRPIAVDWA 293
NG + R I VDWA
Sbjct: 62 SLNGYELRGRSIRVDWA 78
>gi|406867984|gb|EKD21021.1| hypothetical protein MBM_00134 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 544
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+ F A N + + F G V NV +P + +TG KGF +V F+ DA++A +
Sbjct: 402 LFLGNLSFDADENTVGEAFGEHGTVVNVRLPTDQETGNPKGFGYVTFSSIDDAKTAFEAM 461
Query: 279 NGQKFGKRPIAVDWAVPK 296
G + RP+ +D+A PK
Sbjct: 462 TGAEIAGRPVRLDYATPK 479
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
+T+F+ NL FD D V + F G VV+ Q T PKG G++ F +++ A A
Sbjct: 400 DTLFLGNLSFDADENTVGEAFGEHGTVVNVRLPTDQETGNPKGFGYVTFSSIDDAKTAFE 459
Query: 486 A 486
A
Sbjct: 460 A 460
>gi|121705054|ref|XP_001270790.1| ribonucleoprotein, chloroplast [Aspergillus clavatus NRRL 1]
gi|119398936|gb|EAW09364.1| ribonucleoprotein, chloroplast [Aspergillus clavatus NRRL 1]
Length = 514
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 48/88 (54%)
Query: 209 GEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCK 268
G+ S + L + N+PF A + ++++F G + + +P + D+G KGF +V+F
Sbjct: 361 GDQSSPESDTLFVGNLPFSANEDSVQELFGEKGSIVGIRLPTDPDSGRPKGFGYVQFASV 420
Query: 269 RDAESAIQKFNGQKFGKRPIAVDWAVPK 296
+A A NG + RP+ +D++ P+
Sbjct: 421 DEAREAFNSLNGAELDGRPVRLDFSTPR 448
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
+T+F+ NLPF + + V++ F G +V + RPKG G+++F +V+ A A +
Sbjct: 369 DTLFVGNLPFSANEDSVQELFGEKGSIVGIRLPTDPDSGRPKGFGYVQFASVDEAREAFN 428
Query: 486 A 486
+
Sbjct: 429 S 429
>gi|428672185|gb|EKX73099.1| conserved hypothetical protein [Babesia equi]
Length = 700
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 67/133 (50%), Gaps = 15/133 (11%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
++ +RN+PF A E++ F V ++IP G KGFAFV+F+ ++ I K
Sbjct: 224 RVFVRNLPFDATQAELEKFFVSVDPKAKIHIP----KGSKKGFAFVQFSSLASSQKVIDK 279
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDD--------- 328
NG F R I + ++P++IYS+ + ++K ++ SD ++ DD
Sbjct: 280 LNGTMFNNRRIQLTLSLPRDIYSTKPKNSADEDKT-LSAQEPSDAEVNDDGEEEEGEEEE 338
Query: 329 -AETASDDSNSSE 340
E +DS+SS+
Sbjct: 339 KVEYIDEDSDSSQ 351
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 129/274 (47%), Gaps = 41/274 (14%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
TIF+ NL ++ EE+++ FS +G + S + +GT F+ F + + A ++
Sbjct: 366 TIFVRNLSYEATEEELQEYFSKYGSIES-CKICKDDKGANRGTAFILFSSKKDADEVLNM 424
Query: 487 S---------------------KTTSGLGIFLKGRQLTVLKALDKK----LAHDKEIDKS 521
K +GLG L+GR+L + A+ + + +++ DK
Sbjct: 425 EELALERDNEFSVETKDKKVKHKLVAGLGFSLRGRRLRLSLAVSRDEASLIVKNRKEDK- 483
Query: 522 KNETNDHRNLYLAKEGLILEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLV 581
+N+ N+ +N +L G++ E + + ++D + + ++K+ K+++PN ++ RL
Sbjct: 484 ENKANEKKNKHLLMMGVLDEHSGEFKQLNDKEQKLHRSCLKEKLEKMKNPNMFINPKRLC 543
Query: 582 IYNLPKSMTEKGLKKLCI---------DAVVSRASKQ--KPVIKQIKFLQSLKKGKV-DT 629
I NLP ++T L+ D + +A K + ++K +K KV D
Sbjct: 544 IRNLPPTVTANELRTAIASHFKKTKSEDEDIEKAKKHPNRGILKITLLSDESRKVKVGDM 603
Query: 630 KHYSRG-VAFVEFTEHQHALVALRVLNNNPSKLF 662
K R AFVEF H+ A+ AL+ L NN S LF
Sbjct: 604 KMKRRKPFAFVEFINHELAMEALKFLANN-STLF 636
>gi|388604324|pdb|4EGL|A Chain A, Crystal Structure Of Two Tandem Rna Recognition Motifs Of
Human Antigen R
Length = 177
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 79/175 (45%), Gaps = 12/175 (6%)
Query: 122 RTVIIGGLLNADMAE-EVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVLYT 180
RT +I L +M + E+ L SIG V S L ++++ H L V Y
Sbjct: 2 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAK--LIRDKVAGHSLGY-------GFVNYV 52
Query: 181 TVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPV 240
T K A ++ L+ ++ T+ + L I +P +++DMFS
Sbjct: 53 TAKDAERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRF 112
Query: 241 GLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK--FGKRPIAVDWA 293
G + N + + TGLS+G AF++F + +AE AI FNG K PI V +A
Sbjct: 113 GRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVXFA 167
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 216 KWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAI 275
+ LI+ +P +E++ +FS +G V + + + G S G+ FV + +DAE AI
Sbjct: 2 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAI 61
Query: 276 QKFNGQKFGKRPIAVDWAVPK-------NIYSSG 302
NG + + I V +A P N+Y SG
Sbjct: 62 NTLNGLRLQSKTIKVSYARPSSEVIKDANLYISG 95
>gi|301120270|ref|XP_002907862.1| eukaryotic translation initiation factor 3 subunit G, putative
[Phytophthora infestans T30-4]
gi|262102893|gb|EEY60945.1| eukaryotic translation initiation factor 3 subunit G, putative
[Phytophthora infestans T30-4]
Length = 325
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 14/184 (7%)
Query: 125 IIGGLLNADMAEEVHRLAGSIGTVCSVTYPL---PKEELEQHGLAQEGCKMDASAVLYTT 181
I G+ N+ + V R G +G ++ P PKEELEQ +A+ +A+A +
Sbjct: 113 IFAGVKNSSIV--VCRHCGMVGDHWTLKCPYKDTPKEELEQD-MAKRAESGEAAAPAAAS 169
Query: 182 VKSACASVAL--------LHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEI 233
+ A AL ++G GG+ S+ L + N+ + +++
Sbjct: 170 AEPAARGSALDGAFGSSKYVPPSLRGRASAGGDAGGDNSRDDSATLRVTNVSPDTREDDL 229
Query: 234 KDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWA 293
K++F G V VY+ + +T S+GFAFV F + DAE A+ K G + + ++WA
Sbjct: 230 KELFRAFGPVARVYLAKDRETFQSRGFAFVSFMYREDAEKALNKLQGYGYDHLILKLEWA 289
Query: 294 VPKN 297
P N
Sbjct: 290 KPSN 293
>gi|238479733|ref|NP_001154607.1| translation initiation factor eIF-3 subunit 4 [Arabidopsis
thaliana]
gi|332641521|gb|AEE75042.1| translation initiation factor eIF-3 subunit 4 [Arabidopsis
thaliana]
Length = 321
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 221 IRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNG 280
+ N+ + ++ ++F P G V VY+ + TG+S+GF FV F + DA+ AI K NG
Sbjct: 244 VTNLSEDTREPDLMELFHPFGAVTRVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNG 303
Query: 281 QKFGKRPIAVDWAVPK 296
+ + V+WA P+
Sbjct: 304 YGYDNLILRVEWATPR 319
>gi|367020140|ref|XP_003659355.1| hypothetical protein MYCTH_2296269 [Myceliophthora thermophila ATCC
42464]
gi|347006622|gb|AEO54110.1| hypothetical protein MYCTH_2296269 [Myceliophthora thermophila ATCC
42464]
Length = 534
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+PF A + + F+ V ++ IP + ++G KGFA+V F+ DA+ A +
Sbjct: 403 LFVGNLPFSADEDSVSKFFNKAAKVQSLRIPTDQESGRPKGFAYVTFSSVEDAKKAFETL 462
Query: 279 NGQKFGKRPIAVDWAVPKN 297
NG RP+ +D+A P++
Sbjct: 463 NGSDLDGRPVRLDYAKPRD 481
Score = 42.4 bits (98), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAA 483
+T+F+ NLPF D + V + F+ +V S Q + RPKG ++ F +VE A A
Sbjct: 401 DTLFVGNLPFSADEDSVSKFFNKAAKVQSLRIPTDQESGRPKGFAYVTFSSVEDAKKA 458
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRAS 51
+ T + S +GF YV F+ +EDA +A E NG+ + GR + + +A R S
Sbjct: 432 IPTDQESGRPKGFAYVTFSSVEDAKKAFETLNGSDLDGRPVRLDYAKPRDS 482
>gi|301103392|ref|XP_002900782.1| RNA-binding protein, putative [Phytophthora infestans T30-4]
gi|262101537|gb|EEY59589.1| RNA-binding protein, putative [Phytophthora infestans T30-4]
Length = 758
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
Query: 204 ARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFV 263
A ++ GEG K+ K+I+RN+ F+A NEI+++F G + V +P D G +GFAFV
Sbjct: 631 AGEVDGEGRKS---KIIVRNVAFEATSNEIRELFGAFGQLKRVRMPKKFD-GRHRGFAFV 686
Query: 264 KFTCKRDAESAIQKFNGQKFGKRPIAVDWA 293
+F +++A +A R + ++WA
Sbjct: 687 EFLTEQEARNAFSALASSHLYGRHLVLEWA 716
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 130/321 (40%), Gaps = 47/321 (14%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L ++N+P +++ F+ G V + + D S+ F FV F AE A +
Sbjct: 20 RLYVQNLPAYVDSARLREHFAAQGEVTDACVIRTKDGSKSRRFGFVGFKSSTQAEQARKF 79
Query: 278 FNGQKFGKRPIAV---------DWAVPKNIYSSG-----------GAAAG-VQNKGDGNS 316
F+ F I V D P + YS+G G +G Q +
Sbjct: 80 FHQSFFDTCKINVRVALARESDDMERPWSKYSAGSGRYQKLHSESGVTSGEFQEFMETMQ 139
Query: 317 DSGSDDDLGDDDAETASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSD 376
+DD + +D +++ D+ D D+E L ++
Sbjct: 140 ARSKTKFWANDDVQGPTDGKTATKGVDIADAEDSDDEYQ--------------ELDTMKP 185
Query: 377 DSALVKGNKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFD 436
D E+DS + V + K +S ++ +SK + +D+ +F+ NLPF
Sbjct: 186 D------EDEEDSTEKVKKGKKSEAMSDMDFLRSKMSKSEAGTEDDKPTARLFVRNLPFT 239
Query: 437 LDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIF 496
E+++ S +G V V + T+R KG GF+ F+T A AA+ T+ G+
Sbjct: 240 AVEEDLEALCSTYGPVEE-VHMPLDDTRRRKGYGFVLFRTTVDAQAAL-----TTLNGMA 293
Query: 497 LKGRQLTVLKALDKKLAHDKE 517
+GR+L V+ A K + D E
Sbjct: 294 FQGRRLHVIFARSKPVKLDPE 314
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 104/240 (43%), Gaps = 15/240 (6%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+PF A +++ + S G V V++P + DT KG+ FV F DA++A+
Sbjct: 230 RLFVRNLPFTAVEEDLEALCSTYGPVEEVHMPLD-DTRRRKGYGFVLFRTTVDAQAALTT 288
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDDSN 337
NG F R + V +A K + AA D N +L N
Sbjct: 289 LNGMAFQGRRLHVIFARSKPVKLDPEAAL-----ADPNLSYKQRKELERQIQAQKKTGWN 343
Query: 338 SSEKEDLPSNADFDEEVDIAR-KVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTVNES 396
+S + E + + R ++++K ++ ++ LVK NK+ + + V
Sbjct: 344 ASYIRGDATVGSLAERMGVKRGEIMDKEQGNMAVRLAIG-ETMLVKENKDFFAREGV--- 399
Query: 397 AKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFV 456
D++ + + K + +Q + + I I NLP D EE+ Q F GE+ F+
Sbjct: 400 ----DLNAIEGALVKKPTQQQAKKIERSTTVILIKNLPHTTDEEELAQLFRKHGEIGRFL 455
>gi|340914665|gb|EGS18006.1| hypothetical protein CTHT_0060190 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 539
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+ F A + + F+ V V ++ IP + ++G KGFA+V F DA++A +
Sbjct: 412 LFVGNLSFNATEESVSEFFNSVAAVQSLRIPTDQESGRPKGFAYVTFNSVEDAKTAFNQL 471
Query: 279 NGQKFGKRPIAVDWAVPKN 297
NG RP+ +D+A P++
Sbjct: 472 NGSNLDGRPVRLDFAKPRD 490
>gi|397642327|gb|EJK75167.1| hypothetical protein THAOC_03118, partial [Thalassiosira oceanica]
Length = 452
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 34/205 (16%)
Query: 124 VIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVLYTTVK 183
+ IG L + ++ + G+ G V V P+ + G V +T +
Sbjct: 21 LYIGNLDYSTDEPQLRSVFGAFGAVTDVFLPMERGTSRPRGFG---------FVTLSTRQ 71
Query: 184 SACASVALLHQKEIKGGTV------------WARQ-------LGGEGSKTQKW----KLI 220
+A ++A + Q ++ G T+ AR+ GG G+ + KL
Sbjct: 72 AAEDAIAKMDQSQLDGRTIRVNESRPRGEGPGARRSNEPGTGPGGYGAFNPQGREDVKLY 131
Query: 221 IRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNG 280
+ N+ F ++ MF G V + ++P + DTG +GFAFV K +AE+A K NG
Sbjct: 132 VGNLSFDTNEEAVRSMFEQYGTVSDCFLPSDRDTGRPRGFAFVTMPAK-EAETACNKVNG 190
Query: 281 QKFGKRPIAVDWAVPKNIYSSGGAA 305
+ R + V+ A PK + SSGG
Sbjct: 191 MELDGRTVRVNEAQPK-VSSSGGGG 214
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL I N+ + +++ +F G V +V++P T +GF FV + ++ AE AI K
Sbjct: 20 KLYIGNLDYSTDEPQLRSVFGAFGAVTDVFLPMERGTSRPRGFGFVTLSTRQAAEDAIAK 79
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDD 328
+ + R I V+ + P+ G A G G G+ + G +D
Sbjct: 80 MDQSQLDGRTIRVNESRPRG---EGPGARRSNEPGTGPGGYGAFNPQGRED 127
Score = 42.4 bits (98), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
++I NL + D +++ F AFG V + + T RP+G GF+ T +AA A++
Sbjct: 21 LYIGNLDYSTDEPQLRSVFGAFGAVTDVFLPMERGTSRPRGFGFVTLSTRQAAEDAIA 78
>gi|388854650|emb|CCF51807.1| probable RNA-binding protein [Ustilago hordei]
Length = 874
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 57/101 (56%), Gaps = 12/101 (11%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
K++++N+PF+A +I+D+FS GLV +V +P D ++GFAFV++T R+A++A++
Sbjct: 738 KILVKNLPFEATKKDIRDLFSSQGLVKSVRLPKKFDNS-TRGFAFVEYTTVREAQAAMEA 796
Query: 278 FNGQKFGKRPIAVDWA-----------VPKNIYSSGGAAAG 307
R + + W+ + +N SG AAG
Sbjct: 797 LKHTHLLGRHLVLQWSKTATTAEEEVEMQRNKTKSGYVAAG 837
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+PF A +E++ F G V V+IP + T SKG AF+ FT A +A +
Sbjct: 330 RLFVRNLPFAASEDEVQSFFESFGSVKQVHIPLDKQTKASKGLAFISFTDPAHALAAFRA 389
Query: 278 FNGQKFGKRPIAVDWAVPK 296
+G F R + + AV K
Sbjct: 390 KDGSTFQGRLLHLLPAVNK 408
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+F+ NLPF +EV+ F +FG V L + TK KG F+ F A AA A
Sbjct: 331 LFVRNLPFAASEDEVQSFFESFGSVKQVHIPLDKQTKASKGLAFISFTDPAHALAAFRAK 390
Query: 488 KTTSGLGIFLKGRQLTVLKALDKK 511
G +GR L +L A++K+
Sbjct: 391 D-----GSTFQGRLLHLLPAVNKE 409
>gi|351694750|gb|EHA97668.1| Putative RNA-binding protein 19 [Heterocephalus glaber]
Length = 955
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 49/79 (62%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A + EI+++FS G + V +P T TG +GF FV F K+DA+ A
Sbjct: 828 KILVRNIPFQASLREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFLTKQDAKRAFN 887
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 888 ALCHSTHLYGRR-LVLEWA 905
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Query: 202 VWARQLGGEGSKTQKW----KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLS 257
W ++ GE + + +L +RN+P+ + +++ +FS G + ++ P ++ T
Sbjct: 378 AWQGRMLGENEEEEDLADSGRLFVRNLPYTSTEEDLEKLFSTYGPLSELHFPIDSLTKKP 437
Query: 258 KGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGV 308
KGFAFV F A A +GQ F R + V +P I AG
Sbjct: 438 KGFAFVTFLFPEHAVKAYSAVDGQVFQGRMLHV---LPSTIRKEASEEAGA 485
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 7/106 (6%)
Query: 413 KSLKQTEGEDELQNT--IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTG 470
+ L + E E++L ++ +F+ NLP+ E++++ FS +G + + +TK+PKG
Sbjct: 382 RMLGENEEEEDLADSGRLFVRNLPYTSTEEDLEKLFSTYGPLSELHFPIDSLTKKPKGFA 441
Query: 471 FLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDK 516
F+ F E A A SA G +GR L VL + +K A ++
Sbjct: 442 FVTFLFPEHAVKAYSAVD-----GQVFQGRMLHVLPSTIRKEASEE 482
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 130/335 (38%), Gaps = 73/335 (21%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q E SKT ++ +N+P E+++ F G + V +P T A V+F
Sbjct: 573 QAAAERSKTV---ILAKNLPAGTLAAELQETFGRFGSLGRVLLPEGGVT------AIVEF 623
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLG 325
+A A + KF P+ ++WA P +I+SS Q K N + + G
Sbjct: 624 LEPLEARKAFRHLAYSKFHHVPLYLEWA-PISIFSS----TAPQEKAPQNPPA---EPAG 675
Query: 326 DD--------DAETASDDSNSSEK--------------------EDLPS------NADFD 351
D D+ET + E+ E LP N +FD
Sbjct: 676 KDRAEPEAVADSETPGTGKPAEERAAASTTKMEEEEEQEEEEENESLPGCTLFIKNLNFD 735
Query: 352 EEVDIARKVLNKLTSTT-----------GSLPSLSDDSALVKGNKEQDSDKTVNE-SAKV 399
+ ++V +K + G+L LS V+ K + + K + + V
Sbjct: 736 TTEETLKEVFSKAGAVRSCSVSKKKNKEGAL--LSMGFGFVEYRKPEHAQKALRQLQGHV 793
Query: 400 SDVSKL----NSSKSKP---KSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEV 452
D KL + ++P S K+ + + I + N+PF E+++ FS FGE+
Sbjct: 794 VDGHKLELRISERATRPALTSSRKKQVPRKQTTSKILVRNIPFQASLREIRELFSTFGEL 853
Query: 453 VSF-VPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
+ +P T +G GF+ F T + A A +A
Sbjct: 854 KTVRLPKKMTGTGAHRGFGFVDFLTKQDAKRAFNA 888
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 6 GSNEHRGFGYVQFAVMEDANRAVE-MKNGTSVGGRKIGVKHAMHRASLEQRRSKVTQEVQ 64
G+ HRGFG+V F +DA RA + + T + GR++ ++ A +L+ R K +
Sbjct: 864 GTGAHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEVTLQTLRRKTAEHFH 923
Query: 65 AEDIEKTMDNKDGVISGAEKHSS 87
+K DG++ E S
Sbjct: 924 EPPKKKQSAVLDGILGQLEDSES 946
>gi|15229743|ref|NP_187747.1| translation initiation factor eIF-3 subunit 4 [Arabidopsis
thaliana]
gi|12322907|gb|AAG51445.1|AC008153_18 putative eukaryotic translation initiation factor 3 subunit;
21071-22901 [Arabidopsis thaliana]
gi|16226341|gb|AAL16140.1|AF428308_1 AT3g11400/F24K9_7 [Arabidopsis thaliana]
gi|9755847|emb|CAC01929.1| translation initiation factor 3, subunit g (eIF3g) [Arabidopsis
thaliana]
gi|18377870|gb|AAL67121.1| AT3g11400/F24K9_7 [Arabidopsis thaliana]
gi|22137220|gb|AAM91455.1| AT3g11400/F24K9_7 [Arabidopsis thaliana]
gi|332641520|gb|AEE75041.1| translation initiation factor eIF-3 subunit 4 [Arabidopsis
thaliana]
Length = 294
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 221 IRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNG 280
+ N+ + ++ ++F P G V VY+ + TG+S+GF FV F + DA+ AI K NG
Sbjct: 217 VTNLSEDTREPDLMELFHPFGAVTRVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNG 276
Query: 281 QKFGKRPIAVDWAVPK 296
+ + V+WA P+
Sbjct: 277 YGYDNLILRVEWATPR 292
>gi|168705058|ref|ZP_02737335.1| RNA-binding protein [Gemmata obscuriglobus UQM 2246]
Length = 100
Score = 60.8 bits (146), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/79 (40%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL + N+PF A +E+++MFS G V + I + DTG S+GFAFV+ A+ A+Q
Sbjct: 3 KLYVGNLPFNATADELREMFSAFGRVLSATICTDRDTGNSRGFAFVELA--EGADEAVQG 60
Query: 278 FNGQKFGKRPIAVDWAVPK 296
N +FG R + V+ A P+
Sbjct: 61 LNQAQFGGRSLTVNEAKPR 79
>gi|296805886|ref|XP_002843767.1| ribonucleoprotein [Arthroderma otae CBS 113480]
gi|238845069|gb|EEQ34731.1| ribonucleoprotein [Arthroderma otae CBS 113480]
Length = 471
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+PF A N ++++FS G + + +P + D+G KGF +V+F+ +A +A++
Sbjct: 341 LFLGNLPFSADENAVQELFSKHGSILGIRLPTDPDSGRPKGFGYVQFSSVDEARAALEAE 400
Query: 279 NGQKFGKRPIAVDWAVPK 296
G G R I +D++ P+
Sbjct: 401 YGADLGGRAIRIDFSTPR 418
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
+T+F+ NLPF D V++ FS G ++ + RPKG G+++F +V+ A AA+
Sbjct: 339 DTLFLGNLPFSADENAVQELFSKHGSILGIRLPTDPDSGRPKGFGYVQFSSVDEARAALE 398
Query: 486 ASKTTSGLGIFLKGRQLTV 504
A G L GR + +
Sbjct: 399 AE-----YGADLGGRAIRI 412
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+F NL +++D E ++ F FGE+V V + + R +G G+++F VE A A +A
Sbjct: 235 LFAGNLSWNVDEEWLRSEFEEFGELVGARIVTDRESGRSRGFGYVEFANVEDAVKAHAAK 294
Query: 488 KTTSGLGIFLKGRQLTV 504
K L GR+L +
Sbjct: 295 KDAE-----LDGRKLNL 306
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHR 49
+VT + S RGFGYV+FA +EDA +A K + GRK+ + A R
Sbjct: 264 IVTDRESGRSRGFGYVEFANVEDAVKAHAAKKDAELDGRKLNLDFANAR 312
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHR 49
+ T S +GFGYVQF+ +++A A+E + G +GGR I + + R
Sbjct: 370 LPTDPDSGRPKGFGYVQFSSVDEARAALEAEYGADLGGRAIRIDFSTPR 418
>gi|302892801|ref|XP_003045282.1| hypothetical protein NECHADRAFT_43518 [Nectria haematococca mpVI
77-13-4]
gi|256726207|gb|EEU39569.1| hypothetical protein NECHADRAFT_43518 [Nectria haematococca mpVI
77-13-4]
Length = 718
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 218 KLIIRNIPFKAKVNE-IKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
KLIIRN+P+ K +E + ++F G + +P + G KGF F+ K++AE A++
Sbjct: 146 KLIIRNLPWSIKTSEQLSNLFRSFGKIKFADLPQSQ--GKLKGFGFITIRGKKNAEKALE 203
Query: 277 KFNGQKFGKRPIAVDWAVPKNIYS 300
NG++ R +AVDWAV K ++
Sbjct: 204 AINGKEIDGRTLAVDWAVDKETWA 227
>gi|348686579|gb|EGZ26394.1| hypothetical protein PHYSODRAFT_484800 [Phytophthora sojae]
Length = 768
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
++ GEG K+ K+I+RN+ F+A NEI+++F G + V +P D G +GFAFV+F
Sbjct: 643 EVDGEGRKS---KIIVRNVAFEATSNEIRELFGAFGQLKRVRMPKKFD-GRHRGFAFVEF 698
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWA 293
+++A +A R + ++WA
Sbjct: 699 LTEQEARNAFSALASSHLYGRHLVLEWA 726
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 105/240 (43%), Gaps = 14/240 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+PF A +++ + S G V V++P + +T KG+ FV F DA++A+
Sbjct: 236 RLFLRNLPFTAVEEDLEALCSTYGPVEEVHMPLD-ETRRRKGYGFVLFRTTVDAQTALTA 294
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDDSN 337
NG F R + V +A K + AA D N +L N
Sbjct: 295 LNGMAFQGRRLHVIFARSKRVKLDPEAALA-----DPNLTYKQRKELERQIQAQKKTGWN 349
Query: 338 SSEKEDLPSNADFDEEVDIAR-KVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTVNES 396
+S + E + + R ++++K ++ + + LVK NK+ + + V+ +
Sbjct: 350 ASYIRGDATVGSLAERMGVKRGEIMDKEQGNMAVRLAIGE-TMLVKENKDFFAREGVDLN 408
Query: 397 AKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFV 456
A + K KP +Q++ + I I NLP + EE+ Q F GE+ F+
Sbjct: 409 AIEGALVK------KPSQQQQSKKIERSTTVILIKNLPHTTEEEELAQLFRKHGEIGRFL 462
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 136/314 (43%), Gaps = 42/314 (13%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
++I+N+P + E+ +F G + +P SK A V+F +A A +
Sbjct: 434 ILIKNLPHTTEEEELAQLFRKHGEIGRFLLPP------SKTLAVVEFLEPSEARKAFRSL 487
Query: 279 NGQKFGKRPIAVDWAVPKNIY------SSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETA 332
+K+ P+ ++WA P ++ SS A + KG ++ + D DD+ +TA
Sbjct: 488 AYKKYQHVPLYLEWA-PVKVFDRPATASSSAKAPTSEQKGIKSTSAVVPD--VDDEGDTA 544
Query: 333 SDDSNSSEKEDLPSNADFDEEVDIARKV------LNKLTSTTGSLPS---LSDDSALVKG 383
D++ + N +F + K+ L K+T P LS V+
Sbjct: 545 VGDASHT---ICVKNLNFTTKEAALEKIFERCGKLRKVTVARRKDPKRGMLSMGFGFVEY 601
Query: 384 NKEQDSDKTVNE-SAKVSDVSKLN-------SSKSKPKSLKQTEGEDELQNTIFICNLPF 435
+ +++ + V D LN +S + +++ + +GE ++ I + N+ F
Sbjct: 602 VDAKHTERALQTLQNTVVDGHALNLKLSQKKASAAPKRAVGEVDGEGR-KSKIIVRNVAF 660
Query: 436 DLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGI 495
+ + E+++ F AFG++ V + + R +G F++F T + A A SA ++
Sbjct: 661 EATSNEIRELFGAFGQLKR-VRMPKKFDGRHRGFAFVEFLTEQEARNAFSALASSH---- 715
Query: 496 FLKGRQLTVLKALD 509
L GR L + A D
Sbjct: 716 -LYGRHLVLEWAED 728
>gi|116180414|ref|XP_001220056.1| hypothetical protein CHGG_00835 [Chaetomium globosum CBS 148.51]
gi|88185132|gb|EAQ92600.1| hypothetical protein CHGG_00835 [Chaetomium globosum CBS 148.51]
Length = 475
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+PF A + + + F+ V V ++ IP + ++G KGFA+V F+ DA+ +
Sbjct: 328 LFVGNLPFSADESSVSNYFNEVAQVQSLRIPTDQESGRPKGFAYVTFSSIDDAKKVFEAL 387
Query: 279 NGQKFGKRPIAVDWAVPKN 297
NG RP+ +D+A P++
Sbjct: 388 NGGDLDGRPVRLDYAKPRD 406
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 417 QTEGED-ELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFK 475
+++GED E T+++ NL + +D+ + + F + +VS V + T R +G G++ F
Sbjct: 211 KSDGEDSEKSATLWVGNLGWGVDDNALYEEFQSIEGIVSARVVSDKETGRSRGFGYVDFD 270
Query: 476 TVEAATAAVSASKTTSGLGIFLKGRQLTV 504
+ EAA A G FL+GR L +
Sbjct: 271 SAEAAQKAYDEKS-----GAFLQGRDLRL 294
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAA 480
+T+F+ NLPF D V F+ +V S Q + RPKG ++ F +++ A
Sbjct: 326 DTLFVGNLPFSADESSVSNYFNEVAQVQSLRIPTDQESGRPKGFAYVTFSSIDDA 380
>gi|148228969|ref|NP_001088073.1| RNA binding motif protein 19 [Xenopus laevis]
gi|52354760|gb|AAH82875.1| LOC494769 protein [Xenopus laevis]
Length = 920
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 5/105 (4%)
Query: 192 LHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN 251
L ++ I+ T R+ K Q K+++RN+PF+A V EI+++FS G + V +P
Sbjct: 773 LSERAIRAATSMERK-KQISKKQQSSKILVRNVPFQATVREIRELFSTFGELKTVRLPKK 831
Query: 252 -TDTGLSKGFAFVKFTCKRDAESAIQKF--NGQKFGKRPIAVDWA 293
TG +GF FV F K+DA+ A + +G+R + ++WA
Sbjct: 832 MAGTGSHRGFGFVDFVTKQDAKRAFSALCHSTHLYGRR-LVLEWA 875
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+P+ +++ +FS G + ++ P ++ T KGFAFV F A A +
Sbjct: 387 RLFVRNLPYSCTEDDLDKLFSKYGPISEIHFPIDSLTKKPKGFAFVTFLITEHAVKAYAE 446
Query: 278 FNGQKFGKRPIAV--DWAVPKNIYSSGGAAAGVQNK 311
+GQ F R + V A + + S G A+G + +
Sbjct: 447 VDGQIFQGRLLHVLPSAAKKEEVNESEGDASGYKKQ 482
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+F+ NLP+ +++ + FS +G + + +TK+PKG F+ F E A A +
Sbjct: 388 LFVRNLPYSCTEDDLDKLFSKYGPISEIHFPIDSLTKKPKGFAFVTFLITEHAVKAYAEV 447
Query: 488 KTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHR 529
G +GR L VL + KK +E+++S+ + + ++
Sbjct: 448 D-----GQIFQGRLLHVLPSAAKK----EEVNESEGDASGYK 480
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 6 GSNEHRGFGYVQFAVMEDANRAVE-MKNGTSVGGRKIGVKHAMHRASLEQRRSKVTQ 61
G+ HRGFG+V F +DA RA + + T + GR++ ++ A S+E R K +
Sbjct: 834 GTGSHRGFGFVDFVTKQDAKRAFSALCHSTHLYGRRLVLEWAETEDSVETLRRKTAE 890
>gi|389743141|gb|EIM84326.1| hypothetical protein STEHIDRAFT_170049 [Stereum hirsutum FP-91666
SS1]
Length = 779
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 133/342 (38%), Gaps = 70/342 (20%)
Query: 218 KLIIRNIPFKAKVNEIKDMFS----PVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAES 273
+LI++ +P + +K+ FS P G + +V + H D G S+ F FV + +A
Sbjct: 3 RLIVKGLPTYITPDRLKEYFSQSKGPGGTITDVKVAHKQD-GTSRRFGFVGYKTDAEAAK 61
Query: 274 AIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNK----GDGNSDSGSDDDLGD--- 326
A + F+ + VD + + A A NK G S++ S+ LG
Sbjct: 62 AKEWFDKTFLDTARVRVDV-----VDGAKDAPAPRPNKRPRLGPSPSEAASEAALGPKTN 116
Query: 327 ------------------------------DDAETASDDSNSSEKEDLPSNADFDEEVDI 356
D E D + S+K D + +D ++ +
Sbjct: 117 AKKSSKSKDSQLDEFLQVMQPRSRKGPSWADAPEAPEDTATQSKKSDRQAKSDVEKSQPV 176
Query: 357 ARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTVNESA-KVSDVSKLNSSKSKPKSL 415
+ P D ++ QD + V E A + SD ++++ ++
Sbjct: 177 EEEP-----------PEGMSDMEWLRARMRQDVETAVPEKAFEQSDDEEMDTGEALVPEQ 225
Query: 416 KQTEGEDELQNTI------FICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGT 469
K+ E D + TI F+ NL F +E+++ F FGE+ + TK+PKG
Sbjct: 226 KEEERSDPTKETILQTARLFVRNLAFACTEDELRELFRPFGEISQIHIPIDPKTKQPKGL 285
Query: 470 GFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKK 511
++ F AA AA S +GR L +L A+D+K
Sbjct: 286 AYVSFVQPTAALAAYETLDRKS-----FQGRLLHILGAVDRK 322
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
K++++N+PF+A EI+++F G + +V +P D ++GFAF++F +++AE+A
Sbjct: 659 KMLVKNVPFEATKKEIRELFGSHGQLKSVRVPKRFDH-RTRGFAFLEFVTRQEAENAYNA 717
Query: 278 FNGQKFGKRPIAVDWA 293
R + ++WA
Sbjct: 718 LKHTHLLGRHLVLEWA 733
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%)
Query: 215 QKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESA 274
Q +L +RN+ F +E++++F P G + ++IP + T KG A+V F A +A
Sbjct: 240 QTARLFVRNLAFACTEDELRELFRPFGEISQIHIPIDPKTKQPKGLAYVSFVQPTAALAA 299
Query: 275 IQKFNGQKFGKRPIAVDWAV 294
+ + + F R + + AV
Sbjct: 300 YETLDRKSFQGRLLHILGAV 319
>gi|9843653|emb|CAC03600.1| splicing factor SC35 [Arabidopsis thaliana]
Length = 303
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 48/77 (62%)
Query: 217 WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
+ L++ NI F+ +++ +F+ G V +V+IP + TG S+GFAFV++ K +A A++
Sbjct: 16 YSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVE 75
Query: 277 KFNGQKFGKRPIAVDWA 293
+ +G+ R I V +A
Sbjct: 76 RLDGRVVDGREITVQFA 92
>gi|15237641|ref|NP_201225.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|30697964|ref|NP_851261.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|9759396|dbj|BAB09851.1| unnamed protein product [Arabidopsis thaliana]
gi|17380868|gb|AAL36246.1| unknown protein [Arabidopsis thaliana]
gi|21689657|gb|AAM67450.1| unknown protein [Arabidopsis thaliana]
gi|22022546|gb|AAM83231.1| AT5g64200/MSJ1_4 [Arabidopsis thaliana]
gi|23505861|gb|AAN28790.1| At5g64200/MSJ1_4 [Arabidopsis thaliana]
gi|332010470|gb|AED97853.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|332010471|gb|AED97854.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
Length = 303
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 48/77 (62%)
Query: 217 WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
+ L++ NI F+ +++ +F+ G V +V+IP + TG S+GFAFV++ K +A A++
Sbjct: 16 YSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVE 75
Query: 277 KFNGQKFGKRPIAVDWA 293
+ +G+ R I V +A
Sbjct: 76 RLDGRVVDGREITVQFA 92
>gi|345790896|ref|XP_543410.3| PREDICTED: probable RNA-binding protein 19 [Canis lupus familiaris]
Length = 970
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A EI+++FS G + V +P T TG +GF FV F K+DA+ A Q
Sbjct: 835 KILVRNIPFQADKREIQELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFQ 894
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 895 ALCHSTHLYGRR-LVLEWA 912
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 152/370 (41%), Gaps = 67/370 (18%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q E SKT ++++N+P V E+++ F G + V +P T A V+F
Sbjct: 581 QAAAERSKTV---ILVKNLPAGTLVAELQETFGRFGSLGRVLLPEGGIT------AIVEF 631
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGA--------AAGVQNKGDGNSD 317
+A A + KF P+ ++WA P ++SS AG + +
Sbjct: 632 LEPLEARKAFRHLAYSKFHHTPLYLEWA-PVGVFSSSAPQTKEPQDPPAGPAEEDRAEPE 690
Query: 318 SGSDDDL--GDDDAETASDDSNS----------SEKEDLPSNADFDEEVDIA--RKVLNK 363
+ D++ G+ AE ++D + E+E LP F + ++ + + L
Sbjct: 691 TVPDNETPEGEKPAEGRAEDCPAKVEEEEEEEEEEEESLPGCTLFIKNLNFSTTEETLKG 750
Query: 364 LTSTTGSLPS-------------LSDDSALVKGNKEQDSDKTVNE-SAKVSDVSKLN--- 406
+ S G + S LS V+ K + + K + + V D KL
Sbjct: 751 VFSKAGMVKSCSISKKKNKAGELLSMGFGFVEYRKPEQAQKALKQLQGHVVDSHKLEVRI 810
Query: 407 SSKSKPKSLKQTEGED----ELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VPVLHQ 461
S ++ +L T + + + I + N+PF D E+++ FS FGE+ + +P
Sbjct: 811 SERATKPALTSTRKKQVPRKQTTSKILVRNIPFQADKREIQELFSTFGELKTVRLPKKMT 870
Query: 462 VTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV--------LKALDKKLA 513
T +G GF+ F T + A A A ++ L GR+L + L+AL +K A
Sbjct: 871 GTGTHRGFGFVDFLTKQDAKRAFQALCHST----HLYGRRLVLEWADSEVSLQALRRKTA 926
Query: 514 -HDKEIDKSK 522
H E K K
Sbjct: 927 EHFHEPPKKK 936
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 413 KSLKQTEGEDELQNT--IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTG 470
++L + E E++L ++ +FI NLP+ E++++ FS FG + + +TK+PKG
Sbjct: 390 RTLGENEEEEDLADSGRLFIRNLPYTSTEEDLQRLFSKFGPLSELHYPIDSLTKKPKGFA 449
Query: 471 FLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHD 515
F+ F E A A + G +GR L VL + KK A +
Sbjct: 450 FVTFIFPEHAVRAYAEVD-----GQVFQGRMLHVLPSTIKKEASE 489
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L IRN+P+ + +++ +FS G + ++ P ++ T KGFAFV F A A +
Sbjct: 406 RLFIRNLPYTSTEEDLQRLFSKFGPLSELHYPIDSLTKKPKGFAFVTFIFPEHAVRAYAE 465
Query: 278 FNGQKFGKRPIAV 290
+GQ F R + V
Sbjct: 466 VDGQVFQGRMLHV 478
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 6 GSNEHRGFGYVQFAVMEDANRAVE-MKNGTSVGGRKIGVKHAMHRASLEQRRSKVTQ 61
G+ HRGFG+V F +DA RA + + + T + GR++ ++ A SL+ R K +
Sbjct: 871 GTGTHRGFGFVDFLTKQDAKRAFQALCHSTHLYGRRLVLEWADSEVSLQALRRKTAE 927
>gi|260948938|ref|XP_002618766.1| hypothetical protein CLUG_02225 [Clavispora lusitaniae ATCC 42720]
gi|238848638|gb|EEQ38102.1| hypothetical protein CLUG_02225 [Clavispora lusitaniae ATCC 42720]
Length = 633
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 112/220 (50%), Gaps = 27/220 (12%)
Query: 91 ESGKTVKPRKAATLGIDLADKEDCSQKQRVAR-----TVIIGGL----LNADMAEEVHRL 141
+S KT KP +A D+ + + S+++++A +V + L +A + E L
Sbjct: 373 QSEKTEKPVEAKLTARDVMEDANESEEEQMAEVGPTVSVFVKNLNFSTTSASLRELFSEL 432
Query: 142 AGSIGTVCSV-TYPLPKEELEQHGLAQEGCKMDASAVLYTTVKSACASVALLHQKEIKGG 200
G + V +V T P PK+E G+ G V + T + A A+++ L ++G
Sbjct: 433 PGFV--VATVKTKPDPKKE---GGVLSMGFGF----VEFKTKEQAEAAISALDGHVLEGH 483
Query: 201 TVWA----RQLGG--EGSKTQKW-KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTD 253
+ R+ G +G+K+ K K+II+N+PF+A ++ ++F G V +V +P D
Sbjct: 484 RIQLKISHRKSGSKPQGAKSSKSNKIIIKNLPFEATRKDVLELFGAYGSVKSVRVPKKFD 543
Query: 254 TGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWA 293
++GFAFV++T ++AE+A+ + G R + + +A
Sbjct: 544 KS-ARGFAFVEYTMLKEAENAMNQLEGVHLLGRRLVMQYA 582
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%)
Query: 215 QKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESA 274
Q +L +RNI + +K ++ +++FS G + V+I +T TG SKG+ +V+F DA SA
Sbjct: 101 QTGRLFVRNILYDSKEDDFRELFSQYGPLKEVHIAVDTRTGKSKGYVYVQFNNNEDAVSA 160
Query: 275 IQKFNGQKFGKR 286
+ Q F R
Sbjct: 161 FTALDKQIFQGR 172
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 143/338 (42%), Gaps = 66/338 (19%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
++++N P+ EI+D+F+ G + V +P + A V+F A SA K
Sbjct: 288 ILVKNFPYGTSQEEIRDLFAEYGPLKRVLMPP------AGTIAIVEFRDSPSARSAFTKL 341
Query: 279 NGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAE-TASD--- 334
+ F K + ++ PK+++ V+ + S S+ +A+ TA D
Sbjct: 342 AYRMFKKAILYLEKG-PKDLF--------VREPTSDETVSQSEKTEKPVEAKLTARDVME 392
Query: 335 DSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDD-----SALVKG------ 383
D+N SE+E + A+ V + K LN ++T+ SL L + A VK
Sbjct: 393 DANESEEEQM---AEVGPTVSVFVKNLN-FSTTSASLRELFSELPGFVVATVKTKPDPKK 448
Query: 384 ---------------NKEQDS------DKTVNESAKVSDVSKLNSSKSKPKSLKQTEGED 422
KEQ D V E ++ S SKP+ K ++
Sbjct: 449 EGGVLSMGFGFVEFKTKEQAEAAISALDGHVLEGHRIQLKISHRKSGSKPQGAKSSKS-- 506
Query: 423 ELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATA 482
N I I NLPF+ ++V + F A+G V S V V + K +G F+++ ++ A
Sbjct: 507 ---NKIIIKNLPFEATRKDVLELFGAYGSVKS-VRVPKKFDKSARGFAFVEYTMLKEAEN 562
Query: 483 AVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDK 520
A++ + G+ L GR+L + A + + EI+K
Sbjct: 563 AMNQLE-----GVHLLGRRLVMQYAEKESDNAEDEIEK 595
>gi|342884659|gb|EGU84864.1| hypothetical protein FOXB_04645 [Fusarium oxysporum Fo5176]
Length = 736
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 218 KLIIRNIPFKAKVNE-IKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
KLI+RN+P+ K +E + +F G V +P D G KGF FV + +AE A++
Sbjct: 146 KLIVRNLPWSIKTSEQLSHLFRSFGKVKFADLPQ--DKGKLKGFGFVTLRGRPNAERALE 203
Query: 277 KFNGQKFGKRPIAVDWAVPKNIY 299
NG++ R +AVDWAV K+ +
Sbjct: 204 AINGKEIDGRTLAVDWAVDKDTW 226
>gi|3550483|emb|CAA11893.1| cp31BHv [Hordeum vulgare subsp. vulgare]
Length = 283
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 65/125 (52%), Gaps = 8/125 (6%)
Query: 177 VLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQK--------WKLIIRNIPFKA 228
V +T++ A ++ ++ I G + + GS+ ++ ++ + N+P++A
Sbjct: 151 VTMSTIEEADKAIETFNRYNISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQA 210
Query: 229 KVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPI 288
+ + + MFS G V N I ++ +TG S+GF FV K D +SAI +GQ+ RP+
Sbjct: 211 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 270
Query: 289 AVDWA 293
V+ A
Sbjct: 271 RVNVA 275
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQR 55
++ K S + RGFG+V + +E+A++A+E N ++ GR + V A R S +R
Sbjct: 136 VIYNKESGQSRGFGFVTMSTIEEADKAIETFNRYNISGRLLNVNRAAQRGSRVER 190
>gi|71031464|ref|XP_765374.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352330|gb|EAN33091.1| hypothetical protein TP02_0807 [Theileria parva]
Length = 582
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 69/144 (47%), Gaps = 7/144 (4%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
++ IRN+ F + ++++FS G V Y+P D+G G AF+ FT A+ A++
Sbjct: 439 EICIRNLNFNSSEEGLRELFSECGQVTRCYMPKFHDSGKPMGTAFISFTTVEAAKRAVE- 497
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAA------AGVQNKGDGNSDSGSDDDLGDDDAET 331
++ R +++ +A+P++ SS G A GV G G DD
Sbjct: 498 YDNTDIDGRTVSIQYALPRDPRSSRGRATKGRFTTGVNKSGTFARSFGQKKSTNDDSNHV 557
Query: 332 ASDDSNSSEKEDLPSNADFDEEVD 355
+ SSE+E+ P + FD+E D
Sbjct: 558 NGALNESSEQENKPKSIIFDDEDD 581
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 423 ELQNTIFICNLPFDLDNEEVKQRFSAFGEVVS-FVPVLHQVTKRPKGTGFLKFKTVEAAT 481
E N I I NL F+ E +++ FS G+V ++P H K P GT F+ F TVEAA
Sbjct: 435 EATNEICIRNLNFNSSEEGLRELFSECGQVTRCYMPKFHDSGK-PMGTAFISFTTVEAAK 493
Query: 482 AAVSASKTTSGLGIFLKGRQLTVLKAL 508
AV T + GR +++ AL
Sbjct: 494 RAVEYDNTD------IDGRTVSIQYAL 514
>gi|443708578|gb|ELU03655.1| hypothetical protein CAPTEDRAFT_219142 [Capitella teleta]
Length = 774
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLS--KGFAFVKFTCKRDAESAI 275
++I+RN+ FK + +++ F G + V IP D + KGFAFV+F +A++A+
Sbjct: 150 RIIVRNLSFKCTEDILREKFQKFGKILEVKIPLKGDKAKNTMKGFAFVQFETVEEAQAAL 209
Query: 276 QKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGD 313
+ N Q+ RP+AVDW + K + A+ + K D
Sbjct: 210 E-MNAQQILNRPVAVDWCIGKTKFVQANVASVKEAKED 246
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 38/61 (62%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +RN+ F+++ ++ ++FS +G V I N +TG S+G FV+++ K DA+ ++
Sbjct: 377 LFVRNLSFESEEEDMYELFSELGDVVYCRITMNKETGKSRGTGFVQYSSKEDADKCLEVA 436
Query: 279 N 279
N
Sbjct: 437 N 437
>gi|378464494|gb|AFC01196.1| eukaryotic translation initiation factor, partial [Ammopiptanthus
mongolicus]
Length = 147
Score = 60.8 bits (146), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 43/76 (56%)
Query: 221 IRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNG 280
+ N+ + ++ D+F P G V VY+ + TG+S+GF FV F K DA+ AI K NG
Sbjct: 70 VTNLSEDTREPDLHDLFRPFGAVSRVYVAIDQKTGISRGFGFVNFVNKDDAQRAIDKLNG 129
Query: 281 QKFGKRPIAVDWAVPK 296
+ + V+WA P+
Sbjct: 130 YGYDNLILRVEWATPR 145
>gi|326472146|gb|EGD96155.1| nucleolin protein Nsr1 [Trichophyton tonsurans CBS 112818]
Length = 479
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L I NI F A N ++++FS G + + +P + D+G KGF +V+F+ +A +A++
Sbjct: 346 LFIGNISFSADENMVQELFSKYGTIQGIRLPTDPDSGRPKGFGYVQFSSVDEARAALEAE 405
Query: 279 NGQKFGKRPIAVDWAVPK 296
+G G R I +D++ PK
Sbjct: 406 HGADLGGRSIRLDFSTPK 423
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKI 41
+ T S +GFGYVQF+ +++A A+E ++G +GGR I
Sbjct: 375 LPTDPDSGRPKGFGYVQFSSVDEARAALEAEHGADLGGRSI 415
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+F+ NL +++D E ++ F FGE+ V + + R +G G+++F VE A A A
Sbjct: 240 LFVGNLSWNVDEEWLRSEFEEFGELSGTRIVTDRESGRSRGFGYVEFVNVEDAVKAHGAK 299
Query: 488 KTTSGLGIFLKGRQLTV 504
K L GR++ +
Sbjct: 300 KDAE-----LDGRKMNL 311
>gi|82621116|gb|ABB86246.1| DNA-binding protein-like [Solanum tuberosum]
Length = 423
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 123/283 (43%), Gaps = 73/283 (25%)
Query: 237 FSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKF--GKRPIAVDWAV 294
F+ G V +V + N TG S+ + F++F AE +Q +NG ++P ++W+
Sbjct: 99 FAQAGEVISVKVIRNKQTGQSERYGFIEFNTHEAAEKVLQSYNGTMMPNAEQPFRLNWSA 158
Query: 295 PKNIYSSG------GAAAGVQNKGDGNSDSGSD-----DDLGDDDAETASDDSNSSEKED 343
+S+G GAAAG SGSD DL D +T D+ SS
Sbjct: 159 ----FSTGEKRADVGAAAG----------SGSDLSIFVGDLASDVTDTMLRDTFSSR--- 201
Query: 344 LPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTVNESAKVSDVS 403
PS V A+ V++ S TG S V+ + E + + + E + S
Sbjct: 202 YPS-------VKGAKVVID---SNTGR----SKGYGFVRFDDESERSRAMTEMNGIYCSS 247
Query: 404 KLN----SSKSKPKSLKQ----------------TEGEDELQN-TIFICNLPFDLDNEEV 442
+ ++ KP +++Q ++ + +L N T+F+ L D+ +EE+
Sbjct: 248 RAMRIGVATPKKPSAMQQYSSQGGHASNGAATQTSQTDSDLSNTTVFVGGLDSDVTDEEL 307
Query: 443 KQRFSAFGEVVSF-VPVLHQVTKRPKGTGFLKFKTVEAATAAV 484
+Q FS FG VVS +P KG GF++F AA A+
Sbjct: 308 RQSFSQFGNVVSVKIPA-------GKGCGFVQFSERSAAEDAI 343
Score = 39.3 bits (90), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
E++ FS G V +V IP KG FV+F+ + AE AI+K NG G + + +
Sbjct: 306 ELRQSFSQFGNVVSVKIP------AGKGCGFVQFSERSAAEDAIEKLNGTVIGTQTVRLS 359
Query: 292 WA 293
W
Sbjct: 360 WG 361
>gi|297829692|ref|XP_002882728.1| initiation factor 3g [Arabidopsis lyrata subsp. lyrata]
gi|297328568|gb|EFH58987.1| initiation factor 3g [Arabidopsis lyrata subsp. lyrata]
Length = 295
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 221 IRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNG 280
+ N+ + ++ ++F P G V VY+ + TG+S+GF FV F + DA+ AI K NG
Sbjct: 218 VTNLSEDTREPDLMELFHPFGAVTRVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNG 277
Query: 281 QKFGKRPIAVDWAVPK 296
+ + V+WA P+
Sbjct: 278 YGYDNLILRVEWATPR 293
>gi|297820282|ref|XP_002878024.1| initiation factor 3g [Arabidopsis lyrata subsp. lyrata]
gi|297323862|gb|EFH54283.1| initiation factor 3g [Arabidopsis lyrata subsp. lyrata]
Length = 294
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 221 IRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNG 280
+ N+ + ++ ++F P G V VY+ + TG+S+GF FV F + DA+ AI K NG
Sbjct: 217 VTNLSEDTREPDLMELFHPFGAVTRVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNG 276
Query: 281 QKFGKRPIAVDWAVPK 296
+ + V+WA P+
Sbjct: 277 YGYDNLILRVEWATPR 292
>gi|225560173|gb|EEH08455.1| ribonucleoprotein [Ajellomyces capsulatus G186AR]
Length = 470
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L I NI F A N I + F+ G + V +P + ++G KGF +V+F+ +A SA Q
Sbjct: 335 LFIGNIAFSANENMISEAFAEHGSILGVRLPTDPESGRPKGFGYVQFSSVDEARSAFQAL 394
Query: 279 NGQKFGKRPIAVDWAVPK 296
NG G R + +D++ P+
Sbjct: 395 NGADLGGRSMRLDFSSPR 412
>gi|154288132|ref|XP_001544861.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150408502|gb|EDN04043.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 500
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L I NI F A N I + F+ G + V +P + ++G KGF +V+F+ +A SA Q
Sbjct: 365 LFIGNIAFSANENMISEAFAEHGSILGVRLPTDPESGRPKGFGYVQFSSVDEARSAFQAL 424
Query: 279 NGQKFGKRPIAVDWAVPK 296
NG G R + +D++ P+
Sbjct: 425 NGADLGGRSMRLDFSSPR 442
>gi|62319313|dbj|BAD94565.1| eukaryotic translation initiation factor 3 subunit like protein
[Arabidopsis thaliana]
Length = 89
Score = 60.5 bits (145), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 221 IRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNG 280
+ N+ + ++ ++F P G V VY+ + TG+S+GF FV F + DA+ AI K NG
Sbjct: 12 VTNLSEDTREPDLMELFHPFGAVTRVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNG 71
Query: 281 QKFGKRPIAVDWAVPK 296
+ + V+WA P+
Sbjct: 72 YGYDNLILRVEWATPR 87
>gi|12407751|gb|AAG53636.1|AF291712_1 initiation factor 3g [Arabidopsis thaliana]
gi|21593472|gb|AAM65439.1| putative eukaryotic translation initiation factor 3 subunit
[Arabidopsis thaliana]
Length = 294
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 221 IRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNG 280
+ N+ + ++ ++F P G V VY+ + TG+S+GF FV F + DA+ AI K NG
Sbjct: 217 VTNLSEDTREPDLMELFHPFGAVTRVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNG 276
Query: 281 QKFGKRPIAVDWAVPK 296
+ + V+WA P+
Sbjct: 277 YGYDNLILRVEWATPR 292
>gi|168064593|ref|XP_001784245.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664211|gb|EDQ50939.1| predicted protein [Physcomitrella patens subsp. patens]
gi|448878415|gb|AGE46170.1| arginine/serine-rich splicing factor SC37 transcript I
[Physcomitrella patens subsp. patens]
gi|448878417|gb|AGE46171.1| arginine/serine-rich splicing factor SC37 transcript II
[Physcomitrella patens subsp. patens]
Length = 319
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 48/77 (62%)
Query: 217 WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
+ L++ NI F+ +++ +F G V +++IP + TG S+GFAFV++ +A+ AI+
Sbjct: 16 YSLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRYKYADEAQKAIE 75
Query: 277 KFNGQKFGKRPIAVDWA 293
+ +G++ R I V +A
Sbjct: 76 RLDGREVDGRHIVVQFA 92
>gi|296086246|emb|CBI31687.3| unnamed protein product [Vitis vinifera]
Length = 353
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L++RNIP + +++ F GLV +VY+P + TG +GFAFV+F +A A
Sbjct: 119 LLVRNIPLNCRPEDLRVPFERFGLVRDVYLPKDYYTGEPRGFAFVQFVDPYEASEAQYHM 178
Query: 279 NGQKFGKRPIAV 290
NGQ F R I+V
Sbjct: 179 NGQIFAGREISV 190
>gi|159902554|ref|YP_001549898.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. MIT 9211]
gi|159887730|gb|ABX07944.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. MIT 9211]
Length = 245
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + N+PF+A+ ++ +F+P G V N +P DTG +GFAF++ + SAI+
Sbjct: 3 IFVGNLPFRAEQEDVIQLFAPFGEVANCSLPLERDTGRKRGFAFIEMADEAAESSAIEAL 62
Query: 279 NGQKFGKRPIAVDWAVPK 296
G + RP+ ++ A P+
Sbjct: 63 QGAELMGRPLRINKAEPR 80
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
+IF+ NLPF + E+V Q F+ FGEV + L + T R +G F++ A ++A+ A
Sbjct: 2 SIFVGNLPFRAEQEDVIQLFAPFGEVANCSLPLERDTGRKRGFAFIEMADEAAESSAIEA 61
Query: 487 SKTTSGLGIFLKGRQLTVLKA 507
+ G L GR L + KA
Sbjct: 62 LQ-----GAELMGRPLRINKA 77
>gi|53749734|ref|NP_001005461.1| ELAV-like protein 1 [Xenopus (Silurana) tropicalis]
gi|82236379|sp|Q6GLB5.1|ELAV1_XENTR RecName: Full=ELAV-like protein 1; AltName: Full=Protein ElrA
gi|49250885|gb|AAH74585.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R)
[Xenopus (Silurana) tropicalis]
Length = 326
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 83/192 (43%), Gaps = 12/192 (6%)
Query: 109 ADKEDCSQKQRVARTVIIGGLLNADMAE-EVHRLAGSIGTVCSVTYPLPKEELEQHGLAQ 167
D D + + RT +I L +M + E+ L SIG V S L ++++ H L
Sbjct: 6 GDHMDDVCRDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAK--LIRDKVAGHSLGY 63
Query: 168 EGCKMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFK 227
V Y K A ++ L+ ++ T+ + L I +P
Sbjct: 64 -------GFVNYLNAKDAERAINTLNGLRLQSKTIKVSVARPSSESIKDANLYISGLPRT 116
Query: 228 AKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK--FGK 285
+++DMF P G + N + + TGLS+G AF++F + +AE AI FNG K
Sbjct: 117 MTQKDVEDMFLPFGRIINSRVLVDQATGLSRGVAFIRFDKRSEAEEAIASFNGHKPPGSS 176
Query: 286 RPIAVDWAVPKN 297
PI V +A N
Sbjct: 177 EPITVKFAANPN 188
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 112/306 (36%), Gaps = 43/306 (14%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
++ K + G+G+V + +DA RA+ NG + + I V A R S E +
Sbjct: 51 LIRDKVAGHSLGYGFVNYLNAKDAERAINTLNGLRLQSKTIKVSVA--RPSSESIKDA-- 106
Query: 61 QEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQRV 120
+ + +TM KD L G+ + R L D Q +
Sbjct: 107 -NLYISGLPRTMTQKD--------VEDMFLPFGRIINSRV-------LVD-----QATGL 145
Query: 121 ARTVIIGGLLNADMAEEV------HRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDA 174
+R V AEE H+ GS + +V + + + L + C A
Sbjct: 146 SRGVAFIRFDKRSEAEEAIASFNGHKPPGSSEPI-TVKFAANPNQNKNMALLSQLCHSPA 204
Query: 175 ----SAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKV 230
V + + + + + H I G V S + W + I N+ A
Sbjct: 205 RRFGGPVHHQAQRFRFSPMGVDHMSSISGVNV-------ASSASSGWCIFIYNLGQDADE 257
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAV 290
+ MF P G V NV + + +T KGF FV T +A AI NG + G + + V
Sbjct: 258 GILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKTLQV 317
Query: 291 DWAVPK 296
+ K
Sbjct: 318 FFKTSK 323
>gi|159127852|gb|EDP52967.1| nucleolin protein Nsr1, putative [Aspergillus fumigatus A1163]
Length = 546
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + NIPF A + + ++F G + + +P + ++G KGF +V+F+ +A A
Sbjct: 410 LFVGNIPFSANEDSVSELFGQSGTIVGIRLPTDPESGRPKGFGYVQFSSVDEARQAFNDL 469
Query: 279 NGQKFGKRPIAVDWAVPK 296
NG + RP+ +D++ P+
Sbjct: 470 NGAELNGRPVRLDFSTPR 487
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
+T+F+ N+PF + + V + F G +V + RPKG G+++F +V+ A A +
Sbjct: 408 DTLFVGNIPFSANEDSVSELFGQSGTIVGIRLPTDPESGRPKGFGYVQFSSVDEARQAFN 467
>gi|17508567|ref|NP_493029.1| Protein R06C1.4 [Caenorhabditis elegans]
gi|3878851|emb|CAB03222.1| Protein R06C1.4 [Caenorhabditis elegans]
Length = 84
Score = 60.5 bits (145), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 214 TQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAES 273
+Q + + + N+P++ EI + F+ VG V NV I ++ +TG +GFAFV+F+ + A+
Sbjct: 3 SQGFSVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQR 62
Query: 274 AIQKFNGQKFGKRPIAVDWA 293
A+++ NG F R + V++A
Sbjct: 63 AVEQLNGVAFNGRNLRVNYA 82
>gi|71000291|ref|XP_754840.1| nucleolin protein Nsr1 [Aspergillus fumigatus Af293]
gi|66852477|gb|EAL92802.1| nucleolin protein Nsr1, putative [Aspergillus fumigatus Af293]
Length = 546
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + NIPF A + + ++F G + + +P + ++G KGF +V+F+ +A A
Sbjct: 410 LFVGNIPFSANEDSVSELFGQSGTIVGIRLPTDPESGRPKGFGYVQFSSVDEARQAFNDL 469
Query: 279 NGQKFGKRPIAVDWAVPK 296
NG + RP+ +D++ P+
Sbjct: 470 NGAELNGRPVRLDFSTPR 487
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
+T+F+ N+PF + + V + F G +V + RPKG G+++F +V+ A A +
Sbjct: 408 DTLFVGNIPFSANEDSVSELFGQSGTIVGIRLPTDPESGRPKGFGYVQFSSVDEARQAFN 467
>gi|608537|gb|AAA96942.1| ribonucleoprotein [Xenopus laevis]
Length = 326
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 83/191 (43%), Gaps = 12/191 (6%)
Query: 110 DKEDCSQKQRVARTVIIGGLLNADMAE-EVHRLAGSIGTVCSVTYPLPKEELEQHGLAQE 168
D D + + RT +I L +M + E+ L SIG V S L ++++ H L
Sbjct: 7 DHMDDVCRDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAK--LIRDKVAGHSLGY- 63
Query: 169 GCKMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKA 228
V Y K A ++ L+ ++ T+ + L I +P
Sbjct: 64 ------GFVNYLNAKDAERAINTLNGLRLQSKTIKVSFARPSSESIKDANLYISGLPRTM 117
Query: 229 KVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK--FGKR 286
+++DMF P G + N + + TGLS+G AF++F + +AE AI FNG K
Sbjct: 118 TQKDVEDMFLPFGHIINSRVLVDQATGLSRGVAFIRFDKRSEAEEAIASFNGHKPPGSSE 177
Query: 287 PIAVDWAVPKN 297
PI V +A N
Sbjct: 178 PITVKFAANPN 188
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%)
Query: 212 SKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDA 271
S T W + + N+ A + MF P G V NV + + +T KGF FV T +A
Sbjct: 239 SATSGWCIFVYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEA 298
Query: 272 ESAIQKFNGQKFGKRPIAVDWAVPK 296
AI NG + G + + V + K
Sbjct: 299 AMAIASLNGYRLGDKTLQVSFKTSK 323
>gi|357521657|ref|XP_003631117.1| Eukaryotic translation initiation factor 3 subunit [Medicago
truncatula]
gi|355525139|gb|AET05593.1| Eukaryotic translation initiation factor 3 subunit [Medicago
truncatula]
Length = 292
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
++ ++F P G V VY+ + TG+S+GF FV F + DA+ AI K NG + + V+
Sbjct: 226 DLLELFRPFGAVSRVYVAIDQKTGMSRGFGFVNFVSREDAQRAINKLNGYGYDNLILRVE 285
Query: 292 WAVPK 296
WA P+
Sbjct: 286 WATPR 290
>gi|390599914|gb|EIN09310.1| translation initiation factor eIF3g [Punctularia strigosozonata
HHB-11173 SS5]
Length = 296
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%)
Query: 209 GEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCK 268
G G++ L + NI + N+++D+F G V V++ + +TG KGFAFV F K
Sbjct: 206 GSGNRDDLPTLRVTNISEDTQENDLRDLFGRFGRVARVFVGRDRETGAGKGFAFVSFEEK 265
Query: 269 RDAESAIQKFNGQKFGKRPIAVDWAVPK 296
AE A+QK NG + ++V W+ P+
Sbjct: 266 AVAERAMQKMNGFGYDNLILSVQWSQPR 293
>gi|171687819|ref|XP_001908850.1| hypothetical protein [Podospora anserina S mat+]
gi|170943871|emb|CAP69523.1| unnamed protein product [Podospora anserina S mat+]
Length = 459
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+PF A + + F+ V V ++ IP + ++G KGFA+V F DA++A ++
Sbjct: 319 LFVGNLPFSADEDGVSAFFNEVAKVQSLRIPTDMESGRPKGFAYVSFYSIDDAKNAFEQL 378
Query: 279 NGQKFGKRPIAVDWAVPKN 297
NG RP+ +D+A P++
Sbjct: 379 NGADIDGRPVRLDFAKPRD 397
>gi|328773827|gb|EGF83864.1| hypothetical protein BATDEDRAFT_8977, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 873
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL++RN+PF+A +IK++FS V +V IP D G +GFAFV F K++A++A
Sbjct: 762 KLVVRNVPFEASKKDIKELFSSFAQVKSVRIPTKYD-GQHRGFAFVDFLTKQEAKTAYDT 820
Query: 278 FNGQKFGKRPIAVDWA 293
R + ++WA
Sbjct: 821 LGATHLYGRHLVLEWA 836
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 137/329 (41%), Gaps = 51/329 (15%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
++++NIP+ + ++ + F G + + +P +K A V+FT + +A++A +K
Sbjct: 523 ILVKNIPYTTEEEDLIETFGKFGTLGRIILPP------AKTIALVEFTERNEAKAAFRKL 576
Query: 279 NGQKFGKRPIAVDWAVPKNIYSSGGAA---AGVQNKGDGNSDSGSDDDLGDDDAETASDD 335
KF P+ + WA + I++ A A + + + ++A+ +
Sbjct: 577 AYSKFKNIPLYLQWA-SQGIFTQEFDAEKEAARREARSAAKEISTGYQFNAAGFDSATQN 635
Query: 336 SNSSEK-----EDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGN-KEQDS 389
N S K EDL ++ I K LN T+ G + S L N K +D
Sbjct: 636 PNVSSKVEHRLEDLEDDSSAPPVASIYIKNLNFQTTEEGLRQAFGGLSGLRSVNIKMKDD 695
Query: 390 DKTVNES---------AKVSDVSK--------------LNSSKSKP-----KSLKQTEGE 421
KT + A D +K L SKP ++L+ + +
Sbjct: 696 PKTGGKQSLGFGFLGFASTEDATKCLKAMQNFKLDNHVLQLKYSKPVAPQKRTLEMDDED 755
Query: 422 DELQNT-IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAA 480
D ++ T + + N+PF+ +++K+ FS+F +V S V + + + +G F+ F T + A
Sbjct: 756 DTIKGTKLVVRNVPFEASKKDIKELFSSFAQVKS-VRIPTKYDGQHRGFAFVDFLTKQEA 814
Query: 481 TAAVSASKTTSGLGIFLKGRQLTVLKALD 509
A T L GR L + A D
Sbjct: 815 KTAYDTLGATH-----LYGRHLVLEWAQD 838
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 41/73 (56%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
++++RN+ + +I+++F P G + V+IP + +T SKG+AF+ + +A +A
Sbjct: 340 RIMVRNLTYLCSPEDIEELFKPFGPISEVHIPIDRETKKSKGYAFIMYLMPENAVNAYTT 399
Query: 278 FNGQKFGKRPIAV 290
+ F R + +
Sbjct: 400 LDNTIFQGRIMQI 412
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+LI++N+P+ +K+ FS G V +V + D G+ + F FV F + AESA+
Sbjct: 2 RLIVKNLPYNITPERLKNHFSKKGQVTDVKLATTKD-GVFRCFGFVGFKTQEQAESALAY 60
Query: 278 FNGQKFGKRPIAVDWA 293
FN I V+ A
Sbjct: 61 FNKSYIDTSRIEVEVA 76
>gi|449528821|ref|XP_004171401.1| PREDICTED: uncharacterized LOC101216322 [Cucumis sativus]
Length = 251
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%)
Query: 217 WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
+ L++ NI F+ +++ +F G V +V+IP + TG S+GFAFV++ +A+ AI
Sbjct: 16 YSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAID 75
Query: 277 KFNGQKFGKRPIAVDWA 293
K +G+ R I V +A
Sbjct: 76 KLDGRMLDGREIMVQFA 92
>gi|213511062|ref|NP_001133976.1| probable RNA-binding protein 19 [Salmo salar]
gi|209156026|gb|ACI34245.1| Probable RNA-binding protein 19 [Salmo salar]
Length = 912
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 20/140 (14%)
Query: 172 MDASAVLYTTVKSACASVALL-------HQKEIK------GGTVWARQLGGEGSKTQKWK 218
M V Y T K+A ++ L HQ E+K + +R+ E +T K
Sbjct: 730 MGYGFVTYRTQKAAEKAIRQLQHCSVDDHQLELKVSERATKSAIVSRKKQAERKQTSS-K 788
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIP---HNTDTGLSKGFAFVKFTCKRDAESAI 275
+++RN+PF+A V EI+++F G + V +P T TG +GF FV F K+DA+ A
Sbjct: 789 ILVRNVPFQATVREIRELFCTFGELKTVRLPKKASGTGTGPHRGFGFVDFLTKQDAKKAF 848
Query: 276 QKF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 849 SALCHSTHLYGRR-LVLEWA 867
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L IRN+P+ E++D+FS G + V P + T KG+AFV + +A +A+ +
Sbjct: 389 RLFIRNLPYTCTEEELQDLFSKHGPLAEVVFPIDNLTKKPKGYAFVSYMIPENAVTALAQ 448
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDDSN 337
+G F R + + +P + +A + G G+S D + + T+S + N
Sbjct: 449 LDGHIFQGRMLHL---LPSTLKKEKADSA---HSGPGSSSYKRQKDAKNKASSTSSHNWN 502
Query: 338 S 338
+
Sbjct: 503 T 503
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+FI NLP+ EE++ FS G + V + +TK+PKG F+ + E A A++
Sbjct: 390 LFIRNLPYTCTEEELQDLFSKHGPLAEVVFPIDNLTKKPKGYAFVSYMIPENAVTALAQL 449
Query: 488 KTTSGLGIFLKGRQLTVLKALDKK 511
G +GR L +L + KK
Sbjct: 450 D-----GHIFQGRMLHLLPSTLKK 468
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 59/289 (20%), Positives = 124/289 (42%), Gaps = 35/289 (12%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+++N+P V ++++FSP G + V +P GL+ A +++ +A+ A +
Sbjct: 576 FLVKNLPAGVTVENLEELFSPHGTLGRVLLP---PAGLT---AIIEYLEPTEAKQAFTRL 629
Query: 279 NGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDDSN- 337
KF P+ ++WA P ++S+ + + + + + + ++ +++ E + S
Sbjct: 630 AYSKFQHVPLYLEWA-PTGVFSAAMPSKTLTPDPEPTTKTSAQEEEEEEEEEEEALGSTL 688
Query: 338 -----SSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKT 392
+ + F + + ++K TG L LS V ++ ++K
Sbjct: 689 FIKNLNFTTTEETLRETFSKCGTLKTCTISKKKDKTGQL--LSMGYGFVTYRTQKAAEKA 746
Query: 393 VNESAKVS-DVSKL------NSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQR 445
+ + S D +L ++KS S K+ + + I + N+PF E+++
Sbjct: 747 IRQLQHCSVDDHQLELKVSERATKSAIVSRKKQAERKQTSSKILVRNVPFQATVREIREL 806
Query: 446 FSAFGEVVSFVPVLHQVTKRPKGT--------GFLKFKTVEAATAAVSA 486
F FGE+ + ++ K+ GT GF+ F T + A A SA
Sbjct: 807 FCTFGELKTV-----RLPKKASGTGTGPHRGFGFVDFLTKQDAKKAFSA 850
>gi|240278920|gb|EER42426.1| ribonucleoprotein [Ajellomyces capsulatus H143]
gi|325090181|gb|EGC43491.1| ribonucleoprotein [Ajellomyces capsulatus H88]
Length = 472
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L I NI F A N I + F+ G + V +P + ++G KGF +V+F+ +A SA Q
Sbjct: 337 LFIGNIAFSANENMISEAFAEHGSILGVRLPTDPESGRPKGFGYVQFSSVDEARSAFQAL 396
Query: 279 NGQKFGKRPIAVDWAVPK 296
NG G R + +D++ P+
Sbjct: 397 NGADLGGRSMRLDFSSPR 414
>gi|116747535|ref|YP_844222.1| RNP-1 like RNA-binding protein [Syntrophobacter fumaroxidans MPOB]
gi|116696599|gb|ABK15787.1| RNP-1 like RNA-binding protein [Syntrophobacter fumaroxidans MPOB]
Length = 122
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 47/76 (61%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL + N+ F+ +++++FS VG V + + + ++G S+GF FV+ + K + + AI +
Sbjct: 4 KLYVGNLSFQTSSEQLRELFSQVGTVESATVVEDRESGRSRGFGFVEMSTKEEGQKAIAE 63
Query: 278 FNGQKFGKRPIAVDWA 293
NG+ F RP+ V+ A
Sbjct: 64 LNGKDFNGRPLTVNEA 79
>gi|308505322|ref|XP_003114844.1| hypothetical protein CRE_28621 [Caenorhabditis remanei]
gi|308259026|gb|EFP02979.1| hypothetical protein CRE_28621 [Caenorhabditis remanei]
Length = 85
Score = 60.1 bits (144), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 48/79 (60%)
Query: 215 QKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESA 274
Q + + + N PF+ EI + FS VG V NV I ++ +TG +GFAFV+F + A+ A
Sbjct: 4 QGFSVYVGNAPFQTSEEEIGNFFSNVGNVTNVRIVYDRETGRPRGFAFVEFADEAGAQKA 63
Query: 275 IQKFNGQKFGKRPIAVDWA 293
+Q+ NG +F R + V+ A
Sbjct: 64 VQELNGAEFNGRQLRVNLA 82
Score = 40.0 bits (92), Expect = 4.4, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++++ N PF EE+ FS G V + V + T RP+G F++F A AV
Sbjct: 7 SVYVGNAPFQTSEEEIGNFFSNVGNVTNVRIVYDRETGRPRGFAFVEFADEAGAQKAVQE 66
Query: 487 SKTTSGLGIFLKGRQLTVLKALDK 510
G GRQL V A +K
Sbjct: 67 LN-----GAEFNGRQLRVNLANNK 85
>gi|453084886|gb|EMF12930.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 490
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 221 IRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNG 280
++N+P+ ++ ++F +G V I + + G S+G V+F+ DA+++I+KF G
Sbjct: 397 VKNLPWSTSNEDLVELFQTIGTVERAEIQYEPN-GRSRGSGVVQFSNTSDAQTSIEKFQG 455
Query: 281 QKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGD 313
++G RP+ +D+A Y GGA G ++ GD
Sbjct: 456 YQYGGRPLGLDYAK----YPEGGAMEGQESTGD 484
Score = 45.8 bits (107), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
++ + N+P++ ++KD+F G V + H G KG V F DA++AI
Sbjct: 219 QIFVSNLPYQVGWQDLKDLFRQAGNVIRADV-HLGQDGNPKGSGVVAFETPDDAQNAINT 277
Query: 278 FNGQKFGKRPIAV 290
FNG + RP+ V
Sbjct: 278 FNGYDWQGRPLEV 290
>gi|119618468|gb|EAW98062.1| RNA binding motif protein 19, isoform CRA_a [Homo sapiens]
gi|119618469|gb|EAW98063.1| RNA binding motif protein 19, isoform CRA_a [Homo sapiens]
Length = 777
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A EI+++FS G + V +P T TG +GF FV F K+DA+ A
Sbjct: 650 KILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFN 709
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 710 ALCHSTHLYGRR-LVLEWA 727
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 149/370 (40%), Gaps = 67/370 (18%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q E SKT ++++N+P E+++ F G + V +P T A V+F
Sbjct: 396 QAAAERSKTV---ILVKNLPAGTLAAELQETFGHFGSLGRVLLPEGGIT------AIVEF 446
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGA--------AAGVQNKGDGNSD 317
+A A + KF P+ ++WA P ++SS + K +
Sbjct: 447 LEPLEARKAFRHLAYSKFHHVPLYLEWA-PVGVFSSTAPQKKKLQDTPSEPMEKDPAEPE 505
Query: 318 SGSDDDLGDDDAETASDDSNSSEK------------EDLPS------NADFDEEVDIARK 359
+ D + +D+ T NSS K E LP N +FD + ++
Sbjct: 506 TVPDGETPEDENPTEEGADNSSAKMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKE 565
Query: 360 VLNKLTSTTGSLPS---------LSDDSALVKGNKEQDSDKTVNE-SAKVSDVSKL---- 405
V +K+ + S LS V+ K + + K + + V D KL
Sbjct: 566 VFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEVRI 625
Query: 406 NSSKSKPK---SLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VPVLHQ 461
+ +KP + K+ + + I + N+PF + E+++ FS FGE+ + +P
Sbjct: 626 SERATKPAVTLARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMT 685
Query: 462 VTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV--------LKALDKKL- 512
T +G GF+ F T + A A +A ++ L GR+L + L+AL +K
Sbjct: 686 GTGTHRGFGFVDFLTKQDAKRAFNALCHST----HLYGRRLVLEWADSEVTLQALRRKTA 741
Query: 513 AHDKEIDKSK 522
AH E K K
Sbjct: 742 AHFHEPPKKK 751
>gi|402078039|gb|EJT73388.1| nuclear localization sequence binding protein [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 499
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+PF A + + + F V + ++ +P + ++G KGF +V F DA+SA +
Sbjct: 356 LFVGNLPFDADEDVVSEFFGSVAEIKSLRLPTDQESGRRKGFGYVSFNSVEDAKSAFTQL 415
Query: 279 NGQKFGKRPIAVDWAVPK 296
+GQ RP +D++ PK
Sbjct: 416 SGQSINGRPCRLDYSTPK 433
Score = 45.8 bits (107), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
+T+F+ NLPFD D + V + F + E+ S Q + R KG G++ F +VE A +A +
Sbjct: 354 DTLFVGNLPFDADEDVVSEFFGSVAEIKSLRLPTDQESGRRKGFGYVSFNSVEDAKSAFT 413
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Query: 404 KLNSSKSKPKSLKQTEG-EDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQV 462
K + K P +T+ E + T+F+ +L +++D++ +K+ F GEVVS + +
Sbjct: 230 KADEPKEAPTKKSKTDAAESDKPATLFVGSLSWNVDDDMLKEEFKFCGEVVSARVITDRE 289
Query: 463 TKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV 504
T R KG G++ F A+ A + G F+ GRQ+ V
Sbjct: 290 TGRSKGFGYVDF-----ASPADAEKAHAEKQGAFIDGRQIKV 326
>gi|116781904|gb|ABK22291.1| unknown [Picea sitchensis]
Length = 306
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%)
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
+++++F P G + VY+ + TG+S+GF FV F + DA+ AI K NG + + V+
Sbjct: 240 DLQELFKPFGHITRVYVAVDQRTGMSRGFGFVNFANREDAQRAINKLNGYGYDNLILRVE 299
Query: 292 WAVPK 296
WA P+
Sbjct: 300 WATPR 304
>gi|354466972|ref|XP_003495945.1| PREDICTED: probable RNA-binding protein 19 [Cricetulus griseus]
gi|344237019|gb|EGV93122.1| putative RNA-binding protein 19 [Cricetulus griseus]
Length = 954
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A EI+++FS G + V +P T TG +GF FV F K+DA+ A
Sbjct: 826 KILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFVTKQDAKKAFN 885
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 886 ALCHSTHLYGRR-LVLEWA 903
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 413 KSLKQTEGEDELQNT--IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTG 470
++L + E E++L ++ +F+ NL + E++++ FSA+G + + +TK+PKG
Sbjct: 385 RTLGEHEEEEDLADSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFA 444
Query: 471 FLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLA 513
F+ F E A A + G +GR L VL + KK A
Sbjct: 445 FITFMFPEHAVKAYAEVD-----GQVFQGRMLHVLPSTIKKEA 482
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 152/366 (41%), Gaps = 63/366 (17%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q E SKT ++ +N+P E++++F G + V +P T A V+F
Sbjct: 576 QAAAERSKTV---ILAKNLPAGTLAAELQEIFGRFGSLGRVLLPEGGIT------AIVEF 626
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWA-------VPKNIYSSGGAAAG---------VQ 309
+A A + KF P+ ++WA VP+ S A +
Sbjct: 627 LEPLEARKAFRHLAYSKFHHVPLYLEWAPIGVFGTVPQKKDSQPAQTAEKAKAEPEMVLD 686
Query: 310 NKGDGNSDSGSDDDLGDDDAETASDDSNSSEKEDLPSNADFDEEVDIA--RKVLNKLTST 367
+G+ S G++ G + E ++ + E+ +P F + ++ + + L ++ S
Sbjct: 687 PEGEKTSGEGAEAPTGKVEEEEEEEEEDEEEE-SVPGCTLFIKNLNFSTTEETLKEVFSK 745
Query: 368 TGSLPS-------------LSDDSALVKGNKEQDSDKTVNE-SAKVSDVSKLN---SSKS 410
G++ S LS V+ K + + K + + V D KL S ++
Sbjct: 746 VGAVKSCTVSKKKSKAGVLLSMGFGFVEYKKPEKAQKALKQLQGHVVDGHKLEVRISERA 805
Query: 411 KPKSLKQTE----GEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VPVLHQVTKR 465
SL T + + + I + N+PF + E+++ FS FGE+ + +P T
Sbjct: 806 TKPSLTPTRKKQVSKKQTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGA 865
Query: 466 PKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV--------LKALDKKLA-HDK 516
+G GF+ F T + A A +A ++ L GR+L + L+AL +K A H +
Sbjct: 866 HRGFGFVDFVTKQDAKKAFNALCHST----HLYGRRLVLEWADSEVTLQALRRKTARHFQ 921
Query: 517 EIDKSK 522
E K K
Sbjct: 922 EPPKKK 927
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+ + + +++ +FS G + ++ P ++ T KGFAF+ F A A +
Sbjct: 401 RLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYAE 460
Query: 278 FNGQKFGKRPIAV 290
+GQ F R + V
Sbjct: 461 VDGQVFQGRMLHV 473
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 6 GSNEHRGFGYVQFAVMEDANRAVE-MKNGTSVGGRKIGVKHAMHRASLEQRRSKVTQEVQ 64
G+ HRGFG+V F +DA +A + + T + GR++ ++ A +L+ R K + Q
Sbjct: 862 GTGAHRGFGFVDFVTKQDAKKAFNALCHSTHLYGRRLVLEWADSEVTLQALRRKTARHFQ 921
Query: 65 AEDIEKTMDNKDGVISGAE 83
+K DG++ E
Sbjct: 922 EPPKKKRSAVLDGILEQLE 940
>gi|238505292|ref|XP_002383875.1| nucleolin protein Nsr1, putative [Aspergillus flavus NRRL3357]
gi|317151540|ref|XP_001824733.2| nucleolin protein Nsr1 [Aspergillus oryzae RIB40]
gi|220689989|gb|EED46339.1| nucleolin protein Nsr1, putative [Aspergillus flavus NRRL3357]
gi|391872083|gb|EIT81226.1| nuclear localization sequence binding protein [Aspergillus oryzae
3.042]
Length = 525
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 204 ARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFV 263
AR G + S + L + NIPF A + + ++F G + + +P + ++G KGF +V
Sbjct: 376 ARSFGDQAS-PESDTLFVGNIPFSANEDSLHEVFGQKGSILGIRLPTDPESGRPKGFGYV 434
Query: 264 KFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPK 296
+F+ +A A + NG + RP+ +D++ P+
Sbjct: 435 QFSSVEEAREAFNELNGAEIDGRPVRLDFSTPR 467
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHR-ASLEQ 54
++T++ + RGFGYV++ DA +A E K T + GRKI + +A R A+ EQ
Sbjct: 311 IMTERDTGRSRGFGYVEYTNAVDAAKAFEAKRDTEIDGRKINLDYATGRPANREQ 365
>gi|67623683|ref|XP_668124.1| RNA-binding domain protein [Cryptosporidium hominis TU502]
gi|54659302|gb|EAL37885.1| RNA-binding domain protein [Cryptosporidium hominis]
Length = 800
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 203 WARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAF 262
+ +QL G K KL+I+N+PF+A ++I +F+ VG V ++ IP +D G +KG+ F
Sbjct: 695 YGKQLTDIGVKNVSNKLLIKNLPFQATKSDIMSLFNSVGTVTSIRIPKKSD-GTNKGYCF 753
Query: 263 VKFTCKRDAESAIQKFNGQKFGKRPIAVDWA 293
++F K +A SA+++F R + ++ A
Sbjct: 754 IEFLGKLEAISALEQFQHTHLYGRHLIIEVA 784
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 152/367 (41%), Gaps = 69/367 (18%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGL-VWNVYI-----PHNTDTGLSKGFAFVKFTCKRDA 271
++II+N+P +KD S +G + +V I N + S+ F FV F + DA
Sbjct: 18 RIIIKNLPSYLSEKRLKDHISSIGCNITDVKIVKKRSEKNPEVESSRKFGFVGFYSEEDA 77
Query: 272 ESAIQKFNGQKFGKRPIAVDWAVPK---------NIYSSGGAAAGVQNKGDGNSDS---- 318
+ ++ FNG I V +A P + YS G + +N N++
Sbjct: 78 KKVLEYFNGTFIDTCRINVQYAFPPGSDLLPRPWSKYSVGSSQYNKRNNIKENTEVDEKE 137
Query: 319 ----GSDDDLGDDDAETASDDSNSS----EKEDLPSNADF-----DEEVDIARKVLNKLT 365
+DDL ++ + NS+ + DL N + D V I+ +++
Sbjct: 138 PITLSKEDDLKKENFKKWISQKNSNKSWLDSADLIDNNEINSFKNDSSVKISSEIVKPTK 197
Query: 366 STTGSLP-----SLSDDSALVKGNKEQDSD---KTVNESAKVSDVSKLNSSKSKPKSLKQ 417
+ S+ S S+ + +QD + +T NES D S N S+S S
Sbjct: 198 AGVSSVRKHIQFSESESDPDPDSDSDQDLELKHETFNES---DDNSSTNVSESDLSSESN 254
Query: 418 TEGED--ELQNTI----------------FICNLPFDLDNEEVKQRFSAFGEVVSFVPVL 459
T+ ED EL+ + + N+ + E++ + FS +GEV S +
Sbjct: 255 TDSEDNQELEEAVDIGEQMVTSPTETSRLMVVNISYSTTEEDLNKFFSKWGEVKSVNIIR 314
Query: 460 HQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEID 519
+ KG GF++++ VE A +A+S + + L GR L V A +K K I
Sbjct: 315 SPESGVSKGYGFVQYEFVEHAVSALSQAHLS-----LLHGRVLRVSPAFNKPT---KTIT 366
Query: 520 KSKNETN 526
S NE+N
Sbjct: 367 DSFNESN 373
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 59/110 (53%), Gaps = 11/110 (10%)
Query: 196 EIKGGTVWARQLGGEGS---KTQKWKLIIRNIPF-KAKVNEIKDMFSPVGLVWNVYIPHN 251
E++G ++ +L EG + K +II+++P + +++++ + SP G + + +
Sbjct: 461 EVEGSDIFTAKLKFEGVGNVERSKDTIIIKHLPSDQVTLSDLQKICSPFGRINRLCL--- 517
Query: 252 TDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSS 301
SK A V+F + AESA ++ ++F P+ ++WA P N++ S
Sbjct: 518 ---SPSKTIAIVQFLDESSAESAFKRLAFKRFKSVPLYIEWA-PVNLFVS 563
>gi|430811829|emb|CCJ30685.1| unnamed protein product [Pneumocystis jirovecii]
Length = 339
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 78/154 (50%), Gaps = 33/154 (21%)
Query: 527 DHRNLYLAKEGLILEGTPAAEGV--SDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYN 584
D RN++L EG I + + ++ DM + + KK+ + ++P+ ++S TRL + N
Sbjct: 97 DKRNIFLLNEGYIDPKSSLFNLLNETERDMRNQSLTQRKKLLE-KNPSLYISLTRLAVRN 155
Query: 585 LPKSMTEKGLKKL----CID----------AVVSRASK---------QKPVIKQIKFLQS 621
+PK +++K LK L C+D A ++R +K +++Q K LQ
Sbjct: 156 IPKDISDKDLKALARKACVDFAKEVKEKKRAPLTREENLRDGNPKKGKKGIVRQAKILQE 215
Query: 622 LKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLN 655
K G+ +RG F+E+ H+ AL+ LR LN
Sbjct: 216 -KNGQ------ARGCGFIEYVGHRWALMGLRWLN 242
>gi|341900388|gb|EGT56323.1| CBN-TIAR-1 protein [Caenorhabditis brenneri]
Length = 399
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 12/178 (6%)
Query: 122 RTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVLYTT 181
RT+ +G L + V L IG+V + + + AS L T
Sbjct: 42 RTLYVGNLDPTVSEDFVATLFNQIGSVTKTKVIFDGAN-DPYAFVEFSDHAQASQALQTM 100
Query: 182 VKSACASVALLHQKEIKGGTVWARQLGGEGSK---TQKWKLIIRNIPFKAKVNEIKDMFS 238
K LL +E+K WA + G + SK T+ + + + ++ + ++++ F
Sbjct: 101 NKR------LLLDREMK--VNWAVEPGQQPSKIDTTRHFHVFVGDLSSEVDNQKLREAFQ 152
Query: 239 PVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPK 296
P G V + + +T+T SKG+ FV + + +AE AI++ NGQ G+R I +WA K
Sbjct: 153 PFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 210
>gi|148907319|gb|ABR16796.1| unknown [Picea sitchensis]
Length = 387
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 128/296 (43%), Gaps = 47/296 (15%)
Query: 215 QKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESA 274
++ KL + N+P + ++ +F G V +V + N +TG+S+GFAFV + ++A+SA
Sbjct: 92 RRTKLYVGNLPRSCDIAQLTQLFQEFGTVESVEVVRNEETGISRGFAFVTMSTVKEAKSA 151
Query: 275 IQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAET-AS 333
I+K G G R + V++ P + S +DD + +
Sbjct: 152 IEKLQGSDLGGRDMIVNF--PAKVLS---------------KKKETDDSYIETPYQLFVG 194
Query: 334 DDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLP------SLSDDSAL------V 381
+ + S +KE L S V A+ + S G +P LS S + +
Sbjct: 195 NLAWSVKKEILKSLFSQHGNVSAAKVIY----SGKGGVPRAFGFVCLSSQSEMEDAIVSL 250
Query: 382 KGNKEQDSDKTVNESAKVSD---VSKLNSSKSKPKSLKQTEGEDELQNT-------IFIC 431
G + + V ++ S VS + + +KP ++ + + ++ T +++
Sbjct: 251 HGKEFHGRNLKVRQARPTSKDMVVSDVEENIAKPSTMVEDSMTETVKATFVGSAYGVYVS 310
Query: 432 NLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKT---VEAATAAV 484
NL + N+ + + FS G V+ + + R + GF+ F + VEAA AA+
Sbjct: 311 NLSLSVKNKALSELFSQHGNVLDARVLYARKAGRSRPYGFVNFSSQAEVEAAIAAL 366
>gi|221069836|ref|ZP_03545941.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
gi|220714859|gb|EED70227.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
Length = 158
Score = 60.1 bits (144), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL + N+P+ + N+++ F G V + + DTG SKGF FV+ + +A++AIQ
Sbjct: 4 KLYVGNLPYGVRDNDLEQAFGQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAAIQG 63
Query: 278 FNGQKFGKRPIAVDWAVP 295
NGQ G R + V+ A P
Sbjct: 64 MNGQPLGGRSLVVNEARP 81
Score = 43.9 bits (102), Expect = 0.29, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 424 LQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAA 483
+ N +++ NLP+ + + +++Q F FG V S ++ + T R KG GF++ + A AA
Sbjct: 1 MGNKLYVGNLPYGVRDNDLEQAFGQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAA 60
Query: 484 VSASKTTSGLGIFLKGRQLTVLKA 507
+ G L GR L V +A
Sbjct: 61 IQGMN-----GQPLGGRSLVVNEA 79
>gi|449450504|ref|XP_004143002.1| PREDICTED: uncharacterized protein LOC101216322 [Cucumis sativus]
Length = 257
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%)
Query: 217 WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
+ L++ NI F+ +++ +F G V +V+IP + TG S+GFAFV++ +A+ AI
Sbjct: 16 YSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAID 75
Query: 277 KFNGQKFGKRPIAVDWA 293
K +G+ R I V +A
Sbjct: 76 KLDGRMLDGREIMVQFA 92
>gi|148232140|ref|NP_001088628.1| ELAV-like protein 1-B [Xenopus laevis]
gi|82232943|sp|Q5U259.1|ELV1B_XENLA RecName: Full=ELAV-like protein 1-B; AltName: Full=Protein ElrA-B;
Short=ElrA
gi|55250533|gb|AAH86269.1| LOC495680 protein [Xenopus laevis]
Length = 326
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 83/191 (43%), Gaps = 12/191 (6%)
Query: 110 DKEDCSQKQRVARTVIIGGLLNADMAE-EVHRLAGSIGTVCSVTYPLPKEELEQHGLAQE 168
D D + + RT +I L +M + E+ L SIG V S L ++++ H L
Sbjct: 7 DHMDDVCRDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAK--LIRDKVAGHSLGY- 63
Query: 169 GCKMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKA 228
V Y K A ++ L+ ++ T+ + L I +P
Sbjct: 64 ------GFVNYLNAKDAERAINTLNGLRLQSKTIKVSFARPSSETIKDANLYISGLPRTM 117
Query: 229 KVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK--FGKR 286
+++DMF P G + N + + TGLS+G AF++F + +AE AI FNG K
Sbjct: 118 TQKDVEDMFLPFGHIINSRVLVDQATGLSRGVAFIRFDKRSEAEEAIASFNGHKPPGSSE 177
Query: 287 PIAVDWAVPKN 297
PI V +A N
Sbjct: 178 PITVKFAANPN 188
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 37/80 (46%)
Query: 217 WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
W + I N+ A + MF P G V NV + + +T KGF FV T +A AI
Sbjct: 244 WCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIA 303
Query: 277 KFNGQKFGKRPIAVDWAVPK 296
NG + G + + V + K
Sbjct: 304 SLNGYRLGDKTLQVSFKTSK 323
>gi|7076789|emb|CAB75904.1| putative RNA binding protein [Arabidopsis thaliana]
Length = 309
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L++RNIP + E+++ F G V +VYIP + +G +GFAFV+F DA A +
Sbjct: 49 LLVRNIPLDCRPEELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSM 108
Query: 279 NGQKFGKRPIAV 290
N + F R I V
Sbjct: 109 NRRSFAGREITV 120
>gi|392332679|ref|XP_003752658.1| PREDICTED: probable RNA-binding protein 19 [Rattus norvegicus]
Length = 846
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A EI+++FS G + V +P T TG +GF FV F K+DA+ A
Sbjct: 719 KILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFN 778
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 779 ALCHSTHLYGRR-LVLEWA 796
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 148/366 (40%), Gaps = 63/366 (17%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q E SKT ++ +N+P E++++FS G + V +P T A V+F
Sbjct: 469 QAAAERSKTV---ILAKNLPAGTLAAELQEIFSRFGSLGRVLLPEGGIT------AIVEF 519
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLG 325
+A A + KF P+ ++WA P ++ + Q + + +
Sbjct: 520 LEPLEARKAFRHLAYSKFHHVPLYLEWA-PIGVFGAAPQKKDSQPEQPAQKAEAEQETVL 578
Query: 326 DDDAETA----------------SDDSNSSEKEDLPSNADFDEEVDI--ARKVLNKLTST 367
+ + E A ++ E+E +P F + ++ + L ++ S
Sbjct: 579 NPEGEKALVEGAEASMGKMEEEEEEEEEEEEEESIPGCTLFIKNLNFNTTEETLKEVFSR 638
Query: 368 TGSLPS-------------LSDDSALVKGNKEQDSDKTVNE-SAKVSDVSKL----NSSK 409
G++ S LS V+ K + + K + + D KL +
Sbjct: 639 VGAVKSCTISKKKSKAGVLLSMGFGFVEYKKPEQAQKALKRLQGHIVDGHKLEVRISERA 698
Query: 410 SKP---KSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VPVLHQVTKR 465
+KP + K+ + + + I + N+PF + E+++ FS FGE+ + +P T
Sbjct: 699 TKPALTSTRKKQVPKKQTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGA 758
Query: 466 PKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV--------LKALDKKLA-HDK 516
+G GF+ F T + A A +A ++ L GR+L + ++AL +K A H +
Sbjct: 759 HRGFGFVDFITKQDAKKAFNALCHST----HLYGRRLVLEWADSEVTVQALRRKTAKHFQ 814
Query: 517 EIDKSK 522
E K K
Sbjct: 815 EPPKKK 820
>gi|12835985|dbj|BAB23448.1| unnamed protein product [Mus musculus]
Length = 590
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A EI+++FS G + V +P T TG +GF FV F K+DA+ A
Sbjct: 463 KILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFN 522
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 523 ALCHSTHLYGRR-LVLEWA 540
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 129/326 (39%), Gaps = 61/326 (18%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q E SKT ++ +N+P EI++ FS G + V +P T A V+F
Sbjct: 214 QAAAERSKTV---ILAKNLPAGTLAAEIQETFSRFGSLGRVLLPEGGIT------AIVEF 264
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLG 325
+A A + KF P+ ++WA P ++ + Q++ + +
Sbjct: 265 LEPLEARKAFRHLAYSKFHHVPLYLEWA-PIGVFGAAPQKKDSQHEQPAEKAEVEQETVL 323
Query: 326 DDDAETASDDSNSSE---------------KEDLPSNADFDEEVDIA--RKVLNKLTSTT 368
D + E AS + + +E +P F + ++ + + L + S
Sbjct: 324 DPEGEKASVEGAEASTGKMEEEEEEEEEEEEESIPGCTLFIKNLNFSTTEETLKGVFSKV 383
Query: 369 GSLPS-------------LSDDSALVKGNKEQDSDKTVNE-----------SAKVSDVSK 404
G++ S LS V+ K + + K + + ++S+ +
Sbjct: 384 GAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISERAT 443
Query: 405 ---LNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VPVLH 460
L S++ K KQT + I + N+PF + E+++ FS FGE+ + +P
Sbjct: 444 KPALTSTRKKQVPKKQT------TSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKM 497
Query: 461 QVTKRPKGTGFLKFKTVEAATAAVSA 486
T +G GF+ F T + A A +A
Sbjct: 498 TGTGAHRGFGFVDFITKQDAKKAFNA 523
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 413 KSLKQTEGEDELQNT--IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTG 470
++L + E E++L ++ +F+ NL + E++++ FSA+G + + +TK+PKG
Sbjct: 23 RTLGENEEEEDLADSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFA 82
Query: 471 FLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLA 513
F+ F E A A + G +GR L VL + KK A
Sbjct: 83 FVTFMFPEHAVKAYAEVD-----GQVFQGRMLHVLPSTIKKEA 120
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 198 KGGTVWARQLGGEGSKTQKW----KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTD 253
K T W + GE + + +L +RN+ + + +++ +FS G + ++ P ++
Sbjct: 15 KSTTPWQGRTLGENEEEEDLADSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSL 74
Query: 254 TGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAV 290
T KGFAFV F A A + +GQ F R + V
Sbjct: 75 TKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHV 111
>gi|384245230|gb|EIE18725.1| hypothetical protein COCSUDRAFT_20380 [Coccomyxa subellipsoidea
C-169]
Length = 876
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 213 KTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAE 272
K + KL++RN+ F+A ++ +F+P G + + +P D G +GFAFV F K++A+
Sbjct: 756 KAKGTKLVVRNVAFEATRKDVAALFAPFGQIKSCRLPKKFD-GSHRGFAFVDFLTKQEAK 814
Query: 273 SAIQKFNGQKFGKRPIAVDWA 293
SA + G R + V+WA
Sbjct: 815 SAAEAVAGTHLYGRRLVVEWA 835
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 132/316 (41%), Gaps = 44/316 (13%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L+++N+P+ A E+++ F +G + + +P ++ A V+F DA A +
Sbjct: 531 LLVKNLPYTASEAELEETFGKLGAIARLVLPP------TRTLALVQFAEAADARRAFKAL 584
Query: 279 NGQKFGKRPIAVDWAVPKNIYSSGG--------AAAGVQNKGDGNSDSG---SDDDLGDD 327
++F P+ ++WA P +++S A + ++D +D GDD
Sbjct: 585 AYKRFQSVPLYLEWA-PADVFSPDAPLQPRLQAQAVVAKKAKKVDTDEPVEVADLPAGDD 643
Query: 328 DAETASD--DSNSSEKEDLPSNADFDEEVDIARKVLN-------------KLTSTTGSLP 372
+AE+ + + + D A FD V A + L+S G +
Sbjct: 644 EAESTTIYVKNLAFATTDATLRAHFDAVVSAAGGSIRAASVAKRKGPDGKPLSSGFGFIE 703
Query: 373 SLSDDSALVKGNKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQ---NTIF 429
S+D A + K+Q S ++ A + K+ +KP + + D + +
Sbjct: 704 CSSEDVAKIAIKKQQGSILDGHKLALQLSLRKVGGKAAKPSAKETAAAADTGKAKGTKLV 763
Query: 430 ICNLPFDLDNEEVKQRFSAFGEVVSF-VPVLHQVTKRPKGTGFLKFKTVEAATAAVSASK 488
+ N+ F+ ++V F+ FG++ S +P + R G F+ F T + A +A A
Sbjct: 764 VRNVAFEATRKDVAALFAPFGQIKSCRLPKKFDGSHR--GFAFVDFLTKQEAKSAAEAVA 821
Query: 489 TTSGLGIFLKGRQLTV 504
G L GR+L V
Sbjct: 822 -----GTHLYGRRLVV 832
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 13/97 (13%)
Query: 207 LGGEGSKTQK-------------WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTD 253
+GGEGS ++ +L +RN+P+ A ++ + F G + V+I +
Sbjct: 304 IGGEGSAAEEVRAQTKEARIEETGRLFVRNLPYSATEADLAEAFGQHGQLSEVHIVVDKA 363
Query: 254 TGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAV 290
T SKGFA +++ DA +A ++ + F R + V
Sbjct: 364 TRKSKGFALIQYEEVADAITAKEELDESIFQGRLLHV 400
>gi|443899731|dbj|GAC77060.1| nuclear localization sequence binding protein, partial [Pseudozyma
antarctica T-34]
Length = 400
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L I N+ F +++ + FS G V V +P + D+G KGF +V+F + A++AI
Sbjct: 304 LFIGNLSFDISEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAAIDAM 363
Query: 279 NGQKFGKRPIAVDWAVPKN 297
GQ+ RP+ +D++ P++
Sbjct: 364 TGQELAGRPLRLDFSTPRD 382
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 46/101 (45%), Gaps = 17/101 (16%)
Query: 404 KLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVT 463
K N +S P S T+FI NL FD+ ++V FS GEV +
Sbjct: 292 KFNDQRSAPSS------------TLFIGNLSFDISEDDVWNAFSEHGEVSGVRLPKDPDS 339
Query: 464 KRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV 504
RPKG G+++F E+A AA+ A G L GR L +
Sbjct: 340 GRPKGFGYVEFAAQESAQAAIDAM-----TGQELAGRPLRL 375
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKF 474
N I++ L +++DNE +K AFGEV S L + T + +G G++ F
Sbjct: 203 NQIWVGQLSWNVDNEWLKSEMEAFGEVTSARVQLDRTTGKSRGFGYVDF 251
>gi|327282634|ref|XP_003226047.1| PREDICTED: probable RNA-binding protein 19-like isoform 1 [Anolis
carolinensis]
Length = 945
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A V EI+++FS G + V +P TG +GF FV F K+DA+ A
Sbjct: 820 KILVRNIPFQATVKEIRELFSTFGELKTVRLPKKMVGTGTHRGFGFVDFLTKQDAKQAFN 879
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 880 TLCHSTHLYGRR-LVLEWA 897
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 153/368 (41%), Gaps = 71/368 (19%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q E SKT ++++N+P + ++++F G + V +P T A V+F
Sbjct: 576 QAASERSKTV---ILVKNLPAGTEATALEEVFGAYGSLGRVLLPEGGVT------AIVEF 626
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAA----AGVQNKGDGNSDSGSD 321
+A+ A K KF P+ ++WA P ++S G GV+ + +G +++G
Sbjct: 627 LEPTEAKRAFTKLAYSKFRHIPLYLEWA-PMGVFSGPGKRKPENPGVKKESEGPAETGGS 685
Query: 322 DDLGDDDAET-------ASDDSNSSEKEDLPS------NADFDEEVDIARKVLNKLTSTT 368
+ + ET D+ + ++E LP N +F+ + ++V K +
Sbjct: 686 K-VDEVQMETEKGQIEEEDDEDDDDDEESLPGCTLFVKNLNFNTTEETLKEVFTKAGAVK 744
Query: 369 GSLPSLSDDSA---------LVKGNKEQDSDKTVNE-----------SAKVSD--VSKLN 406
S D A V+ K + + K + + K+S+ +
Sbjct: 745 SCTVSRKRDKAGTLLSMGFGFVEYRKPEHAQKALKQLQGCSVDGHQLEVKISERAIKSPV 804
Query: 407 SSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VPVLHQVTKR 465
+S K + LK+ + + I + N+PF +E+++ FS FGE+ + +P T
Sbjct: 805 TSTRKTQRLKKQK-----SSKILVRNIPFQATVKEIRELFSTFGELKTVRLPKKMVGTGT 859
Query: 466 PKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV--------LKALDKKLA---H 514
+G GF+ F T + A A + T L GR+L + ++AL +K A H
Sbjct: 860 HRGFGFVDFLTKQDAKQAFN----TLCHSTHLYGRRLVLEWADTEETVEALRRKTAEHFH 915
Query: 515 DKEIDKSK 522
D K K
Sbjct: 916 DSAPKKKK 923
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+P+ + +++ +FS G + ++ P + T KGFAFV + A A +
Sbjct: 400 RLFVRNLPYTSTEEDLEKLFSKYGPLSEIHFPIDGLTKKPKGFAFVTYMFPEHAVKAFAE 459
Query: 278 FNGQKFGKRPIAV 290
+GQ F R + V
Sbjct: 460 VDGQVFQGRMLHV 472
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 61/119 (51%), Gaps = 7/119 (5%)
Query: 395 ESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNT--IFICNLPFDLDNEEVKQRFSAFGEV 452
E +K + S + +++ ++ K E +++L ++ +F+ NLP+ E++++ FS +G +
Sbjct: 366 EHSKKTKPSSKDPARTWQRTKKVDEEDEDLSDSGRLFVRNLPYTSTEEDLEKLFSKYGPL 425
Query: 453 VSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKK 511
+ +TK+PKG F+ + E A A + G +GR L VL + KK
Sbjct: 426 SEIHFPIDGLTKKPKGFAFVTYMFPEHAVKAFAEVD-----GQVFQGRMLHVLPSTIKK 479
>gi|449432785|ref|XP_004134179.1| PREDICTED: uncharacterized protein LOC101216537 [Cucumis sativus]
gi|449495419|ref|XP_004159835.1| PREDICTED: uncharacterized LOC101216537 [Cucumis sativus]
Length = 248
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L++RN+P A+ +++ F G V +VY+P N TG +GF FVKF DA A Q+
Sbjct: 52 LLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQL 111
Query: 279 NGQKFGKRPIAVDWA 293
N G R I + +A
Sbjct: 112 NHTVIGGREIRIVFA 126
>gi|328850756|gb|EGF99917.1| hypothetical protein MELLADRAFT_118186 [Melampsora larici-populina
98AG31]
Length = 667
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 6/94 (6%)
Query: 411 KPKSLKQTEGEDELQ---NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPK 467
+P K++ G++EL T+FI NLPF + V + FS +G++ S T+R K
Sbjct: 483 RPPQEKRSFGQEELSAPTTTLFIGNLPFSATQDSVYEAFSEYGDINSVRLPTDPETERIK 542
Query: 468 GTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQ 501
G G+++F T EAATAAV+ + G GI++ RQ
Sbjct: 543 GFGYVEFATQEAATAAVNVGR---GDGIYIDQRQ 573
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRA--SLEQRRSK 58
++T++G+ +GFGYV FA EDA +AVE GT + GR I V + + +++RS
Sbjct: 432 VITERGTERSKGFGYVDFASPEDARKAVEAMAGTEIDGRTINVDFSAPKPERPPQEKRSF 491
Query: 59 VTQEVQA 65
+E+ A
Sbjct: 492 GQEELSA 498
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 205 RQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVK 264
R G E L I N+PF A + + + FS G + +V +P + +T KGF +V+
Sbjct: 489 RSFGQEELSAPTTTLFIGNLPFSATQDSVYEAFSEYGDINSVRLPTDPETERIKGFGYVE 548
Query: 265 FTCKRDAESAIQ--KFNGQKFGKRPIAVDWAVPK 296
F + A +A+ + +G +R +D++ P+
Sbjct: 549 FATQEAATAAVNVGRGDGIYIDQRQARLDYSQPR 582
>gi|71024221|ref|XP_762340.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
gi|46101864|gb|EAK87097.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
Length = 475
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L I N+ F +++ + FS G V V +P + D+G KGF +V+F + A++AI
Sbjct: 314 LFIGNLSFDVSEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAAIDAM 373
Query: 279 NGQKFGKRPIAVDWAVPKN 297
GQ+ RP+ +D++ P++
Sbjct: 374 TGQELAGRPLRLDFSTPRD 392
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 45/99 (45%), Gaps = 17/99 (17%)
Query: 404 KLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVT 463
K N +S P S T+FI NL FD+ ++V FS GEV +
Sbjct: 302 KFNDQRSAPSS------------TLFIGNLSFDVSEDDVWNAFSEHGEVSGVRLPKDPDS 349
Query: 464 KRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQL 502
RPKG G+++F E+A AA+ A G L GR L
Sbjct: 350 GRPKGFGYVEFAAQESAQAAIDAM-----TGQELAGRPL 383
>gi|327282636|ref|XP_003226048.1| PREDICTED: probable RNA-binding protein 19-like isoform 2 [Anolis
carolinensis]
Length = 938
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A V EI+++FS G + V +P TG +GF FV F K+DA+ A
Sbjct: 813 KILVRNIPFQATVKEIRELFSTFGELKTVRLPKKMVGTGTHRGFGFVDFLTKQDAKQAFN 872
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 873 TLCHSTHLYGRR-LVLEWA 890
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+P+ + +++ +FS G + ++ P + T KGFAFV + A A +
Sbjct: 400 RLFVRNLPYTSTEEDLEKLFSKYGPLSEIHFPIDGLTKKPKGFAFVTYMFPEHAVKAFAE 459
Query: 278 FNGQKFGKRPIAV 290
+GQ F R + V
Sbjct: 460 VDGQVFQGRMLHV 472
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 150/361 (41%), Gaps = 64/361 (17%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q E SKT ++++N+P + ++++F G + V +P T A V+F
Sbjct: 576 QAASERSKTV---ILVKNLPAGTEATALEEVFGAYGSLGRVLLPEGGVT------AIVEF 626
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAA----AGVQNKGDGNSDSGSD 321
+A+ A K KF P+ ++WA P ++S G GV+ + +G +++
Sbjct: 627 LEPTEAKRAFTKLAYSKFRHIPLYLEWA-PMGVFSGPGKRKPENPGVKKESEGPAET-VQ 684
Query: 322 DDLGDDDAETASDDSNSSEKEDLPS------NADFDEEVDIARKVLNKLTSTTGSLPSLS 375
+ E D+ + ++E LP N +F+ + ++V K + S
Sbjct: 685 METEKGQIEEEDDEDDDDDEESLPGCTLFVKNLNFNTTEETLKEVFTKAGAVKSCTVSRK 744
Query: 376 DDSA---------LVKGNKEQDSDKTVNE-----------SAKVSD--VSKLNSSKSKPK 413
D A V+ K + + K + + K+S+ + +S K +
Sbjct: 745 RDKAGTLLSMGFGFVEYRKPEHAQKALKQLQGCSVDGHQLEVKISERAIKSPVTSTRKTQ 804
Query: 414 SLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VPVLHQVTKRPKGTGFL 472
LK+ + + I + N+PF +E+++ FS FGE+ + +P T +G GF+
Sbjct: 805 RLKKQK-----SSKILVRNIPFQATVKEIRELFSTFGELKTVRLPKKMVGTGTHRGFGFV 859
Query: 473 KFKTVEAATAAVSASKTTSGLGIFLKGRQLTV--------LKALDKKLA---HDKEIDKS 521
F T + A A + T L GR+L + ++AL +K A HD K
Sbjct: 860 DFLTKQDAKQAFN----TLCHSTHLYGRRLVLEWADTEETVEALRRKTAEHFHDSAPKKK 915
Query: 522 K 522
K
Sbjct: 916 K 916
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 61/119 (51%), Gaps = 7/119 (5%)
Query: 395 ESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNT--IFICNLPFDLDNEEVKQRFSAFGEV 452
E +K + S + +++ ++ K E +++L ++ +F+ NLP+ E++++ FS +G +
Sbjct: 366 EHSKKTKPSSKDPARTWQRTKKVDEEDEDLSDSGRLFVRNLPYTSTEEDLEKLFSKYGPL 425
Query: 453 VSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKK 511
+ +TK+PKG F+ + E A A + G +GR L VL + KK
Sbjct: 426 SEIHFPIDGLTKKPKGFAFVTYMFPEHAVKAFAEVD-----GQVFQGRMLHVLPSTIKK 479
>gi|18410283|ref|NP_567021.1| SC35-like splicing factor 30 [Arabidopsis thaliana]
gi|20466366|gb|AAM20500.1| putative RNA binding protein [Arabidopsis thaliana]
gi|21554261|gb|AAM63336.1| putative RNA binding protein [Arabidopsis thaliana]
gi|22136316|gb|AAM91236.1| putative RNA binding protein [Arabidopsis thaliana]
gi|332645866|gb|AEE79387.1| SC35-like splicing factor 30 [Arabidopsis thaliana]
Length = 262
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L++RNIP + E+++ F G V +VYIP + +G +GFAFV+F DA A +
Sbjct: 49 LLVRNIPLDCRPEELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSM 108
Query: 279 NGQKFGKRPIAV 290
N + F R I V
Sbjct: 109 NRRSFAGREITV 120
>gi|449439229|ref|XP_004137389.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
G-like [Cucumis sativus]
gi|449507153|ref|XP_004162947.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
G-like [Cucumis sativus]
Length = 289
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
++ ++F P G V VY+ + TG+S+GF FV F + DA+ AI K NG + + V+
Sbjct: 223 DLLELFRPFGAVSRVYVAVDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVE 282
Query: 292 WAVPK 296
WA P+
Sbjct: 283 WATPR 287
>gi|129562659|gb|ABO31095.1| tsunagi [Schistosoma japonicum]
Length = 176
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 48/83 (57%)
Query: 214 TQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAES 273
+ W L +RN+ +A +I+D F G + N+++ + TG KG+A V++ ++A +
Sbjct: 67 VEGWILFVRNVQEEATEEDIRDKFCEYGDIKNIHLNLDRRTGYLKGYALVEYENFKEAHT 126
Query: 274 AIQKFNGQKFGKRPIAVDWAVPK 296
A+++ NG + + I VDWA K
Sbjct: 127 AMEQLNGSELNGQRIHVDWAFTK 149
>gi|226497574|ref|NP_057280.2| probable RNA-binding protein 19 [Homo sapiens]
gi|226497654|ref|NP_001140170.1| probable RNA-binding protein 19 [Homo sapiens]
gi|226497734|ref|NP_001140171.1| probable RNA-binding protein 19 [Homo sapiens]
gi|308153566|sp|Q9Y4C8.3|RBM19_HUMAN RecName: Full=Probable RNA-binding protein 19; AltName:
Full=RNA-binding motif protein 19
Length = 960
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A EI+++FS G + V +P T TG +GF FV F K+DA+ A
Sbjct: 833 KILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFN 892
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 893 ALCHSTHLYGRR-LVLEWA 910
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 149/370 (40%), Gaps = 67/370 (18%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q E SKT ++++N+P ++++ F G + V +P T A V+F
Sbjct: 579 QAAAERSKTV---ILVKNLPAGTLAAQLQETFGHFGSLGRVLLPEGGIT------AIVEF 629
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGG--------AAAGVQNKGDGNSD 317
+A A + KF P+ ++WA P ++SS + K +
Sbjct: 630 LEPLEARKAFRHLAYSKFHHVPLYLEWA-PVGVFSSTAPQKKKLQDTPSEPMEKDPAEPE 688
Query: 318 SGSDDDLGDDDAETASDDSNSSEK------------EDLPS------NADFDEEVDIARK 359
+ D + +D+ T NSS K E LP N +FD + ++
Sbjct: 689 TVPDGETPEDENPTEEGADNSSAKMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKE 748
Query: 360 VLNKLTSTTGSLPS---------LSDDSALVKGNKEQDSDKTVNE-SAKVSDVSKL---- 405
V +K+ + S LS V+ K + + K + + V D KL
Sbjct: 749 VFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEVRI 808
Query: 406 NSSKSKPK---SLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VPVLHQ 461
+ +KP + K+ + + I + N+PF + E+++ FS FGE+ + +P
Sbjct: 809 SERATKPAVTLARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMT 868
Query: 462 VTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV--------LKALDKKL- 512
T +G GF+ F T + A A +A ++ L GR+L + L+AL +K
Sbjct: 869 GTGTHRGFGFVDFLTKQDAKRAFNALCHST----HLYGRRLVLEWADSEVTLQALRRKTA 924
Query: 513 AHDKEIDKSK 522
AH E K K
Sbjct: 925 AHFHEPPKKK 934
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+P+ + +++ +FS G + ++ P ++ T KGFAF+ F A A +
Sbjct: 403 RLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSE 462
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAAAG 307
+GQ F R + V + K S +A G
Sbjct: 463 VDGQVFQGRMLHVLPSTIKKEASEDASALG 492
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+F+ NLP+ E++++ FS +G + + +TK+PKG F+ F E A A S
Sbjct: 404 LFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEV 463
Query: 488 KTTSGLGIFLKGRQLTVLKALDKKLAHD 515
G +GR L VL + KK A +
Sbjct: 464 D-----GQVFQGRMLHVLPSTIKKEASE 486
>gi|158256324|dbj|BAF84133.1| unnamed protein product [Homo sapiens]
gi|189054403|dbj|BAG37176.1| unnamed protein product [Homo sapiens]
Length = 960
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A EI+++FS G + V +P T TG +GF FV F K+DA+ A
Sbjct: 833 KILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFN 892
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 893 ALCHSTHLYGRR-LVLEWA 910
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 149/370 (40%), Gaps = 67/370 (18%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q E SKT ++++N+P E+++ F G + V +P T A V+F
Sbjct: 579 QAAAERSKTV---ILVKNLPAGTLAAELQETFGHFGSLGRVLLPEGGIT------AIVEF 629
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGG--------AAAGVQNKGDGNSD 317
+A A + KF P+ ++WA P ++SS + K +
Sbjct: 630 LEPLEARKAFRHLAYSKFHHVPLYLEWA-PVGVFSSTAPQKKKLQDTPSEPMEKDPAEPE 688
Query: 318 SGSDDDLGDDDAETASDDSNSSEK------------EDLPS------NADFDEEVDIARK 359
+ D + +D+ T NSS K E LP N +FD + ++
Sbjct: 689 TVPDGETPEDENPTEEGADNSSAKMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKE 748
Query: 360 VLNKLTSTTGSLPS---------LSDDSALVKGNKEQDSDKTVNE-SAKVSDVSKL---- 405
V +K+ + S LS V+ K + + K + + V D KL
Sbjct: 749 VFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEVRI 808
Query: 406 NSSKSKPK---SLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VPVLHQ 461
+ +KP + K+ + + I + N+PF + E+++ FS FGE+ + +P
Sbjct: 809 SERATKPAVTLARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMT 868
Query: 462 VTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV--------LKALDKKL- 512
T +G GF+ F T + A A +A ++ L GR+L + L+AL +K
Sbjct: 869 GTGTHRGFGFVDFLTKQDAKRAFNALCHST----HLYGRRLVLEWADSEVTLQALRRKTA 924
Query: 513 AHDKEIDKSK 522
AH E K K
Sbjct: 925 AHFHEPPKKK 934
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+P+ + +++ +FS G + ++ P ++ T KGFAF+ F A A +
Sbjct: 403 RLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSE 462
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAAAG 307
+GQ F R + V + K S +A G
Sbjct: 463 VDGQVFQGRMLHVLPSTIKKEASEDASALG 492
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+F+ NLP+ E++++ FS +G + + +TK+PKG F+ F E A A S
Sbjct: 404 LFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEV 463
Query: 488 KTTSGLGIFLKGRQLTVLKALDKKLAHD 515
G +GR L VL + KK A +
Sbjct: 464 D-----GQVFQGRMLHVLPSTIKKEASE 486
>gi|9843657|emb|CAC03602.1| SC35-like splicing factor SCL30, 30 kD [Arabidopsis thaliana]
Length = 262
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L++RNIP + E+++ F G V +VYIP + +G +GFAFV+F DA A +
Sbjct: 49 LLVRNIPLDCRPEELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSM 108
Query: 279 NGQKFGKRPIAV 290
N + F R I V
Sbjct: 109 NRRSFSGREITV 120
>gi|40788328|dbj|BAA31657.2| KIAA0682 protein [Homo sapiens]
Length = 973
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A EI+++FS G + V +P T TG +GF FV F K+DA+ A
Sbjct: 846 KILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFN 905
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 906 ALCHSTHLYGRR-LVLEWA 923
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 149/370 (40%), Gaps = 67/370 (18%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q E SKT ++++N+P E+++ F G + V +P T A V+F
Sbjct: 592 QAAAERSKTV---ILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGTT------AIVEF 642
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGA--------AAGVQNKGDGNSD 317
+A A + KF P+ ++WA P ++SS + K +
Sbjct: 643 LEPLEARKAFRHLAYSKFHHVPLYLEWA-PVGVFSSAAPQKKKLQDTPSEPMEKDPAEPE 701
Query: 318 SGSDDDLGDDDAETASDDSNSSEK------------EDLPS------NADFDEEVDIARK 359
+ D + +D+ T NSS K E LP N +FD + ++
Sbjct: 702 TVPDGETPEDENPTEEGADNSSAKMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKE 761
Query: 360 VLNKLTSTTGSLPS---------LSDDSALVKGNKEQDSDKTVNE-SAKVSDVSKL---- 405
V +K+ + S LS V+ K + + K + + V D KL
Sbjct: 762 VFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEVRI 821
Query: 406 NSSKSKPK---SLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VPVLHQ 461
+ +KP + K+ + + I + N+PF + E+++ FS FGE+ + +P
Sbjct: 822 SERATKPAVTLARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMT 881
Query: 462 VTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV--------LKALDKKL- 512
T +G GF+ F T + A A +A ++ L GR+L + L+AL +K
Sbjct: 882 GTGTHRGFGFVDFLTKQDAKRAFNALCHST----HLYGRRLVLEWADSEVTLQALRRKTA 937
Query: 513 AHDKEIDKSK 522
AH E K K
Sbjct: 938 AHFHEPPKKK 947
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+P+ + +++ +FS G + ++ P ++ T KGFAF+ F A A +
Sbjct: 416 RLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSE 475
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAAAG 307
+GQ F R + V + K S +A G
Sbjct: 476 VDGQVFQGRMLHVLPSTIKKEASEDASALG 505
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+F+ NLP+ E++++ FS +G + + +TK+PKG F+ F E A A S
Sbjct: 417 LFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEV 476
Query: 488 KTTSGLGIFLKGRQLTVLKALDKKLAHD 515
G +GR L VL + KK A +
Sbjct: 477 D-----GQVFQGRMLHVLPSTIKKEASE 499
>gi|109098882|ref|XP_001106082.1| PREDICTED: probable RNA-binding protein 19 [Macaca mulatta]
Length = 998
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A EI+++FS G + V +P T TG +GF FV F K+DA+ A
Sbjct: 871 KILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFN 930
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 931 ALCHSTHLYGRR-LVLEWA 948
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 154/374 (41%), Gaps = 75/374 (20%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q E SKT ++++N+P E+++ FS G + V +P T A V+F
Sbjct: 617 QAAAERSKTV---ILVKNLPAGTLAAELQETFSRFGSLGRVLLPEGGIT------AIVEF 667
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLG 325
+A A + KF P+ ++WA P ++SS AA + D + D+
Sbjct: 668 LEPLEARRAFRHLAYSKFHHVPLYLEWA-PVGVFSS--AAPQKKKLQDTPLEPAEKDEAE 724
Query: 326 DD---DAETASDDSNSSEKED-------------------LPS------NADFDEEVDIA 357
+ D E+ D++ + E D LP N +FD +
Sbjct: 725 PETVPDGESPEDENPTEEGVDNSSANMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKL 784
Query: 358 RKVLNKLTST-----------TGSLPSLSDDSALVKGNKEQDSDKTVNE-SAKVSDVSKL 405
+ V +K+ + TG+L LS V+ K + + K + + + D KL
Sbjct: 785 KGVFSKVGTVKSCSISKKKNKTGAL--LSMGVGFVEYRKPEQAQKALKQLQGHIVDGHKL 842
Query: 406 ----NSSKSKP---KSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VP 457
+ +KP + K+ + + I + N+PF + E+++ FS FGE+ + +P
Sbjct: 843 EVRISERATKPAVTSARKKQVPRTQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLP 902
Query: 458 VLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV--------LKALD 509
T +G GF+ F T + A A +A ++ L GR+L + L+AL
Sbjct: 903 KKMTGTGTHRGFGFVDFLTKQDAKRAFNALCHST----HLYGRRLVLEWADSEVTLQALR 958
Query: 510 KKL-AHDKEIDKSK 522
+K AH E K K
Sbjct: 959 RKTAAHFHEPPKKK 972
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+P+ + +++ +FS G + ++ P ++ T KGFAFV F A A +
Sbjct: 441 RLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYSE 500
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAAAG 307
+GQ F R + V + K S +A G
Sbjct: 501 VDGQVFQGRMLHVLPSTIKKEASEDASALG 530
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+F+ NLP+ E++++ FS +G + + +TK+PKG F+ F E A A S
Sbjct: 442 LFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYSEV 501
Query: 488 KTTSGLGIFLKGRQLTVLKALDKKLAHD 515
G +GR L VL + KK A +
Sbjct: 502 D-----GQVFQGRMLHVLPSTIKKEASE 524
>gi|5912081|emb|CAB55987.1| hypothetical protein [Homo sapiens]
Length = 960
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A EI+++FS G + V +P T TG +GF FV F K+DA+ A
Sbjct: 833 KILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFN 892
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 893 ALCHSTHLYGRR-LVLEWA 910
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 149/370 (40%), Gaps = 67/370 (18%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q E SKT ++++N+P E+++ F G + V +P T A V+F
Sbjct: 579 QAAAERSKTV---ILVKNLPAGTLAAELQETFGHFGSLGRVLLPEGGIT------AIVEF 629
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGG--------AAAGVQNKGDGNSD 317
+A A + KF P+ ++WA P ++SS + K +
Sbjct: 630 LEPLEARKAFRHLAYSKFHHVPLYLEWA-PVGVFSSTAPQKKKLQDTPSEPMEKDPAEPE 688
Query: 318 SGSDDDLGDDDAETASDDSNSSEK------------EDLPS------NADFDEEVDIARK 359
+ D + +D+ T NSS K E LP N +FD + ++
Sbjct: 689 TVPDGETPEDENPTEEGADNSSAKMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKE 748
Query: 360 VLNKLTSTTGSLPS---------LSDDSALVKGNKEQDSDKTVNE-SAKVSDVSKL---- 405
V +K+ + S LS V+ K + + K + + V D KL
Sbjct: 749 VFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEVRI 808
Query: 406 NSSKSKPK---SLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VPVLHQ 461
+ +KP + K+ + + I + N+PF + E+++ FS FGE+ + +P
Sbjct: 809 SERATKPAVTLARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMT 868
Query: 462 VTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV--------LKALDKKL- 512
T +G GF+ F T + A A +A ++ L GR+L + L+AL +K
Sbjct: 869 GTGTHRGFGFVDFLTKQDAKRAFNALCHST----HLYGRRLVLEWADSEVTLQALRQKTA 924
Query: 513 AHDKEIDKSK 522
AH E K K
Sbjct: 925 AHFHEPPKKK 934
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+P+ + +++ +FS G + ++ P ++ T KGFAF+ F A A +
Sbjct: 403 RLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSE 462
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAAAG 307
+GQ F R + V + K S +A G
Sbjct: 463 VDGQVFQGRMLHVLPSTIKKEASEDASALG 492
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+F+ NLP+ E++++ FS +G + + +TK+PKG F+ F E A A S
Sbjct: 404 LFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEV 463
Query: 488 KTTSGLGIFLKGRQLTVLKALDKKLAHD 515
G +GR L VL + KK A +
Sbjct: 464 D-----GQVFQGRMLHVLPSTIKKEASE 486
>gi|735966|emb|CAA56649.1| surface antigen [Entamoeba histolytica]
Length = 294
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 128/302 (42%), Gaps = 54/302 (17%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
++II+N+P +A +K F G + + + T G+S+ F F+ F + A++AI K
Sbjct: 3 RIIIKNLPERADEKILKQQFEKFGGITDCKV-MRTPQGVSRKFGFIGFENEDQAQTAITK 61
Query: 278 FNGQKFGKRPIAVDWA---------VPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDD 328
NG + V A P + YS G ++
Sbjct: 62 MNGAYIQSSKLQVSLAKAIGDQTIERPWSKYSVGSSSF---------------------- 99
Query: 329 AETASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDD--SALVKGNKE 386
SN +++ +P+ E I +K K++S+ L ++++ L G K+
Sbjct: 100 -------SNDKKRKIIPTKH---ETPTIKKK---KVSSSLDELKKIANERRPKLDDGKKK 146
Query: 387 Q-DSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQR 445
+ DS+ N D +N + + KS+ + + +D + I+I NLPF+ +E ++
Sbjct: 147 KTDSEDDQNNQQMEEDEEMINEQEHQ-KSMDEIDVKDWEEGRIYITNLPFNCTEDEFRKE 205
Query: 446 FSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVL 505
F FG + + ++TK+ KG G + F + A A + F+KGR + V
Sbjct: 206 FDRFGNIAEIHLPIDKITKKSKGFGKVLFVVPQDAVKACNEMDNK-----FIKGRIVHVT 260
Query: 506 KA 507
A
Sbjct: 261 YA 262
>gi|397525018|ref|XP_003832476.1| PREDICTED: probable RNA-binding protein 19 [Pan paniscus]
Length = 961
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A EI+++FS G + V +P T TG +GF FV F K+DA+ A
Sbjct: 834 KILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFN 893
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 894 ALCHSTHLYGRR-LVLEWA 911
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 151/373 (40%), Gaps = 72/373 (19%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q E SKT ++++N+P E+++ F G + V +P T A V+F
Sbjct: 579 QAAAERSKTV---ILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGIT------AIVEF 629
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGA--------AAGVQNKGDGNSD 317
+A A + KF P+ ++WA P ++SS + K +
Sbjct: 630 LEPLEARKAFRHLAYSKFHHVPLYLEWA-PVGVFSSAAPQKKKLQDTPSEPMEKDPAEPE 688
Query: 318 SGSDDDLGDDDAETASDDSNSSEK-------------EDLPS------NADFDEEVDIAR 358
+ D + +D+ T NSS K E LP N +FD + +
Sbjct: 689 TVPDGETPEDENPTEEGADNSSAKMEEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLK 748
Query: 359 KVLNKLTST-----------TGSLPSLSDDSALVKGNKEQDSDKTVNE-SAKVSDVSKL- 405
+V +K+ + G+L LS V+ K + + K + + V D KL
Sbjct: 749 EVFSKVGTVKSCSISKKKNKAGAL--LSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLE 806
Query: 406 ---NSSKSKP---KSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VPV 458
+ +KP + K+ + + I + N+PF + E+++ FS FGE+ + +P
Sbjct: 807 VRISERATKPAVTSARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPK 866
Query: 459 LHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV--------LKALDK 510
T +G GF+ F T + A A +A ++ L GR+L + L+AL +
Sbjct: 867 KMTGTGTHRGFGFVDFLTKQDAKRAFNALCHST----HLYGRRLVLEWADSEVTLQALRR 922
Query: 511 KL-AHDKEIDKSK 522
K AH E K K
Sbjct: 923 KTAAHFHEPPKKK 935
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+P+ + +++ +FS G + ++ P ++ T KGFAF+ F A A +
Sbjct: 403 RLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSE 462
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAAAG 307
+GQ F R + V + K S +A G
Sbjct: 463 VDGQVFQGRMLHVLPSTIKKEASEDASALG 492
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+F+ NLP+ E++++ FS +G + + +TK+PKG F+ F E A A S
Sbjct: 404 LFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEV 463
Query: 488 KTTSGLGIFLKGRQLTVLKALDKKLAHD 515
G +GR L VL + KK A +
Sbjct: 464 D-----GQVFQGRMLHVLPSTIKKEASE 486
>gi|158292144|ref|XP_313699.3| AGAP004414-PA [Anopheles gambiae str. PEST]
gi|157017295|gb|EAA09129.3| AGAP004414-PA [Anopheles gambiae str. PEST]
Length = 390
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP+ A +K++F VGLV ++ + ++ +TG KG+ F ++ K A SA++
Sbjct: 18 VFVGNIPYDATEEALKEIFCEVGLVLSMKLVYDRETGKPKGYGFCEYKDKETALSAMRNL 77
Query: 279 NGQKFGKRPIAVDWA 293
NG FG RP+ VD A
Sbjct: 78 NGYVFGGRPLRVDNA 92
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Query: 422 DELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAAT 481
D+ ++F+ N+P+D E +K+ F G V+S V + T +PKG GF ++K E A
Sbjct: 12 DKSMRSVFVGNIPYDATEEALKEIFCEVGLVLSMKLVYDRETGKPKGYGFCEYKDKETAL 71
Query: 482 AAVSASKTTSGLGIFLKGRQLTVLKALDKK 511
+A+ G GR L V A +K
Sbjct: 72 SAMRNLN-----GYVFGGRPLRVDNACTEK 96
>gi|74179923|dbj|BAE36520.1| unnamed protein product [Mus musculus]
Length = 308
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 81/179 (45%), Gaps = 12/179 (6%)
Query: 122 RTVIIGGLLNADMA-EEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVLYT 180
RT +I L +M EE+ + SIG V S L ++++ H L V Y
Sbjct: 1 RTNLIENYLPQNMTQEELQGVLSSIGEVESAK--LIRDKVAGHSLGY-------GFVNYV 51
Query: 181 TVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPV 240
T K A +++ L+ ++ T+ + L I +P +++DMFS
Sbjct: 52 TAKDAERAISTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRF 111
Query: 241 GLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK--FGKRPIAVDWAVPKN 297
G + N + + TGLS+G AF++F + +AE AI FNG K PI V +A N
Sbjct: 112 GRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPN 170
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 112/301 (37%), Gaps = 41/301 (13%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
++ K + G+G+V + +DA RA+ NG + + I V +A R S E +
Sbjct: 33 LIRDKVAGHSLGYGFVNYVTAKDAERAISTLNGLRLQSKTIKVSYA--RPSSEVIKDA-- 88
Query: 61 QEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQRV 120
+ + +TM KD E S+ G+ + R L D Q +
Sbjct: 89 -NLYISGLPRTMTQKD-----VEDMFSRF---GRIINSRV-------LVD-----QTTGL 127
Query: 121 ARTVIIGGLLNADMAEEV------HRLAGSIGTVCSVTYPLPKEELEQHGLAQ---EGCK 171
+R V AEE H+ GS + P + L+Q +
Sbjct: 128 SRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNMALLSQLYHSPAR 187
Query: 172 MDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVN 231
V + + + + + H I G V G+ + W + I N+ A
Sbjct: 188 RFGGPVHHQAQRFRFSPMGVDHMSGISGVNV-------PGNASSGWCIFIYNLGQDADEG 240
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
+ MF P G V NV + + +T KGF FV T +A AI NG + G + + V
Sbjct: 241 ILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVS 300
Query: 292 W 292
+
Sbjct: 301 F 301
>gi|145347723|ref|XP_001418311.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578540|gb|ABO96604.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 264
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%)
Query: 221 IRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNG 280
+ N+ + +++++F P G V +Y+ N +TG ++GFAFV K D E AI K +G
Sbjct: 189 VSNLSEDTREQDLQELFRPFGPVTRIYVAINRETGEARGFAFVNMVSKEDGERAIAKLDG 248
Query: 281 QKFGKRPIAVDWAVPK 296
+ + V+WA P+
Sbjct: 249 YGYDNLILRVEWAAPR 264
>gi|426374260|ref|XP_004053996.1| PREDICTED: probable RNA-binding protein 19 [Gorilla gorilla
gorilla]
Length = 960
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A EI+++FS G + V +P T TG +GF FV F K+DA+ A
Sbjct: 833 KILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFN 892
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 893 ALCHSTHLYGRR-LVLEWA 910
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 151/372 (40%), Gaps = 71/372 (19%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q E SKT ++++N+P V E+++ F G + V +P T A V+F
Sbjct: 579 QAAAERSKTV---ILVKNLPAGTLVAELQETFGHFGSLGRVLLPEGGIT------AIVEF 629
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGA--------AAGVQNKGDGNSD 317
+A A + KF P+ ++WA P ++SS + K +
Sbjct: 630 LEPLEARKAFRHLAYSKFHHVPLYLEWA-PVGVFSSAAPQKKKLQDTPSEPMEKDPAEPE 688
Query: 318 SGSDDDLGDDDAETASDDSNSSEK------------EDLPS------NADFDEEVDIARK 359
+ D + +D T NSS K E LP N +FD + ++
Sbjct: 689 TVPDGETPEDKNPTEEGADNSSAKMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKE 748
Query: 360 VLNKLTST-----------TGSLPSLSDDSALVKGNKEQDSDKTVNE-SAKVSDVSKL-- 405
V +K+ + G+L LS V+ K + + K + + V D KL
Sbjct: 749 VFSKVGTVKSCSISKKKNKAGAL--LSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEV 806
Query: 406 --NSSKSKP---KSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VPVL 459
+ +KP + K+ + + I + N+PF + E+++ FS FGE+ + +P
Sbjct: 807 RISERATKPAMTSARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKK 866
Query: 460 HQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV--------LKALDKK 511
T +G GF+ F T + A A +A ++ L GR+L + L+AL +K
Sbjct: 867 MTGTGTHRGFGFVDFLTKQDAKRAFNALCHST----HLYGRRLVLEWADSEVTLQALRRK 922
Query: 512 L-AHDKEIDKSK 522
AH E K K
Sbjct: 923 TAAHFHEPPKKK 934
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+P+ + +++ +FS G + ++ P ++ T KGFAF+ F A A +
Sbjct: 403 RLFVRNLPYTSSEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSE 462
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAAAG 307
+GQ F R + V + K S +A G
Sbjct: 463 VDGQVFQGRMLHVLPSTIKKEASEDASALG 492
Score = 45.8 bits (107), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+F+ NLP+ E++++ FS +G + + +TK+PKG F+ F E A A S
Sbjct: 404 LFVRNLPYTSSEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEV 463
Query: 488 KTTSGLGIFLKGRQLTVLKALDKKLAHD 515
G +GR L VL + KK A +
Sbjct: 464 D-----GQVFQGRMLHVLPSTIKKEASE 486
>gi|403281594|ref|XP_003932266.1| PREDICTED: probable RNA-binding protein 19 [Saimiri boliviensis
boliviensis]
Length = 960
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A EI+++FS G + V +P T TG +GF FV F K+DA+ A
Sbjct: 833 KILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFN 892
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 893 ALCHSTHLYGRR-LVLEWA 910
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+P+ + +++ +FS G + ++ P ++ T KGFAFV F A A +
Sbjct: 403 RLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYSE 462
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAAAG 307
+GQ F R + V + K S +A G
Sbjct: 463 VDGQVFQGRMLHVLPSTIKKETSEDASALG 492
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 147/379 (38%), Gaps = 85/379 (22%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q E SKT ++++N+P E+++ F G + V +P T A V+F
Sbjct: 579 QAAAERSKTV---ILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGIT------AIVEF 629
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLG 325
+A A + KF P+ ++WA P ++S GAA + D + D
Sbjct: 630 LEPLEARKAFRHLAYSKFHHVPLYLEWA-PVGVFS--GAAPQKKEPQDAPPEPTEKDQAE 686
Query: 326 D---DDAETASDDSNSSEKED-------------------LPS------NADFDEEVDIA 357
ET D++ + E D LP N +FD +
Sbjct: 687 PGTVSSGETPEDENPTEEAADSSSAKMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKL 746
Query: 358 RKVLNKLTSTTG--------------SLPS----------LSDDSALVKGNKEQDSDKTV 393
++V +K+ + +P+ L ++G+ D V
Sbjct: 747 KEVFSKVGTVKSCSISKKKNKAGIPHEIPAGRSGFPKTLQLQTRVLRLQGHIVDDHKLEV 806
Query: 394 NESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVV 453
S + + + + S++ K KQT + I + N+PF + E+++ FS FGE+
Sbjct: 807 RISERATKPA-MTSARKKQVPRKQT------TSKILVRNIPFQAHSREIRELFSTFGELK 859
Query: 454 SF-VPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV-------- 504
+ +P T +G GF+ F T + A A +A ++ L GR+L +
Sbjct: 860 TVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFNALCHST----HLYGRRLVLEWADTEVT 915
Query: 505 LKALDKKL-AHDKEIDKSK 522
L+AL +K AH E K K
Sbjct: 916 LQALRRKTAAHFHEPPKKK 934
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+F+ NLP+ E++++ FS +G + + +TK+PKG F+ F E A A S
Sbjct: 404 LFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYSEV 463
Query: 488 KTTSGLGIFLKGRQLTVLKALDKK 511
G +GR L VL + KK
Sbjct: 464 D-----GQVFQGRMLHVLPSTIKK 482
>gi|355564713|gb|EHH21213.1| hypothetical protein EGK_04225 [Macaca mulatta]
Length = 960
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A EI+++FS G + V +P T TG +GF FV F K+DA+ A
Sbjct: 833 KILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFN 892
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 893 ALCHSTHLYGRR-LVLEWA 910
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 153/374 (40%), Gaps = 75/374 (20%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q E SKT ++++N+P E+++ F G + V +P T A V+F
Sbjct: 579 QAAAERSKTV---ILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGIT------AIVEF 629
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLG 325
+A A + KF P+ ++WA P ++SS AA + D + D+
Sbjct: 630 LEPLEARRAFRHLAYSKFHHVPLYLEWA-PVGVFSS--AAPQKKKLQDTPLEPAEKDEAE 686
Query: 326 DD---DAETASDDSNSSEKED-------------------LPS------NADFDEEVDIA 357
+ D E+ D++ + E D LP N +FD +
Sbjct: 687 PEAVPDGESPEDENPTEEGVDNSSANMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKL 746
Query: 358 RKVLNKLTST-----------TGSLPSLSDDSALVKGNKEQDSDKTVNE-SAKVSDVSKL 405
+ V +K+ + TG+L LS V+ K + + K + + + D KL
Sbjct: 747 KGVFSKVGTVKSCSISKKKNKTGAL--LSMGFGFVEYRKPEQAQKALKQLQGHIVDGHKL 804
Query: 406 ----NSSKSKP---KSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VP 457
+ +KP + K+ + + I + N+PF + E+++ FS FGE+ + +P
Sbjct: 805 EVRISERATKPAVTSARKKQVPRTQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLP 864
Query: 458 VLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV--------LKALD 509
T +G GF+ F T + A A +A ++ L GR+L + L+AL
Sbjct: 865 KKMTGTGTHRGFGFVDFLTKQDAKRAFNALCHST----HLYGRRLVLEWADSEVTLQALR 920
Query: 510 KKL-AHDKEIDKSK 522
+K AH E K K
Sbjct: 921 RKTAAHFHEPPKKK 934
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+P+ + +++ +FS G + ++ P ++ T KGFAFV F A A +
Sbjct: 403 RLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYSE 462
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAAAG 307
+GQ F R + V + K S +A G
Sbjct: 463 VDGQVFQGRMLHVLPSTIKKEASEDASALG 492
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+F+ NLP+ E++++ FS +G + + +TK+PKG F+ F E A A S
Sbjct: 404 LFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYSEV 463
Query: 488 KTTSGLGIFLKGRQLTVLKALDKKLAHD 515
G +GR L VL + KK A +
Sbjct: 464 D-----GQVFQGRMLHVLPSTIKKEASE 486
>gi|388495782|gb|AFK35957.1| unknown [Medicago truncatula]
Length = 292
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%)
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
++ ++F P G V VY+ TG+S+GF FV F + DA+ AI K NG + + V+
Sbjct: 226 DLLELFRPFGAVSRVYVAIGQKTGMSRGFGFVNFVSREDAQRAINKLNGYGYDNLILRVE 285
Query: 292 WAVPK 296
WA P+
Sbjct: 286 WATPR 290
>gi|380818506|gb|AFE81126.1| putative RNA-binding protein 19 [Macaca mulatta]
gi|383412169|gb|AFH29298.1| putative RNA-binding protein 19 [Macaca mulatta]
Length = 960
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A EI+++FS G + V +P T TG +GF FV F K+DA+ A
Sbjct: 833 KILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFN 892
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 893 ALCHSTHLYGRR-LVLEWA 910
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 153/374 (40%), Gaps = 75/374 (20%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q E SKT ++++N+P E+++ F G + V +P T A V+F
Sbjct: 579 QAAAERSKTV---ILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGIT------AIVEF 629
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLG 325
+A A + KF P+ ++WA P ++SS AA + D + D+
Sbjct: 630 LEPLEARRAFRHLAYSKFHHVPLYLEWA-PVGVFSS--AAPQKKKLQDTPLEPAEKDEAE 686
Query: 326 DD---DAETASDDSNSSEKED-------------------LPS------NADFDEEVDIA 357
+ D E+ D++ + E D LP N +FD +
Sbjct: 687 PETVPDGESPEDENPTEEGVDNSSANMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKL 746
Query: 358 RKVLNKLTST-----------TGSLPSLSDDSALVKGNKEQDSDKTVNE-SAKVSDVSKL 405
+ V +K+ + TG+L LS V+ K + + K + + + D KL
Sbjct: 747 KGVFSKVGTVKSCSISKKKNKTGAL--LSMGFGFVEYRKPEQAQKALKQLQGHIVDGHKL 804
Query: 406 ----NSSKSKP---KSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VP 457
+ +KP + K+ + + I + N+PF + E+++ FS FGE+ + +P
Sbjct: 805 EVRISERATKPAVTSARKKQVPRTQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLP 864
Query: 458 VLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV--------LKALD 509
T +G GF+ F T + A A +A ++ L GR+L + L+AL
Sbjct: 865 KKMTGTGTHRGFGFVDFLTKQDAKRAFNALCHST----HLYGRRLVLEWADSEVTLQALR 920
Query: 510 KKL-AHDKEIDKSK 522
+K AH E K K
Sbjct: 921 RKTAAHFHEPPKKK 934
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+P+ + +++ +FS G + ++ P ++ T KGFAFV F A A +
Sbjct: 403 RLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYSE 462
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAAAG 307
+GQ F R + V + K S +A G
Sbjct: 463 VDGQVFQGRMLHVLPSTIKKEASEDASALG 492
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+F+ NLP+ E++++ FS +G + + +TK+PKG F+ F E A A S
Sbjct: 404 LFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYSEV 463
Query: 488 KTTSGLGIFLKGRQLTVLKALDKKLAHD 515
G +GR L VL + KK A +
Sbjct: 464 D-----GQVFQGRMLHVLPSTIKKEASE 486
>gi|355786561|gb|EHH66744.1| hypothetical protein EGM_03792 [Macaca fascicularis]
Length = 960
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A EI+++FS G + V +P T TG +GF FV F K+DA+ A
Sbjct: 833 KILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFN 892
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 893 ALCHSTHLYGRR-LVLEWA 910
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 153/374 (40%), Gaps = 75/374 (20%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q E SKT ++++N+P E+++ F G + V +P T A V+F
Sbjct: 579 QAAAERSKTV---ILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGIT------AIVEF 629
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLG 325
+A A + KF P+ ++WA P ++SS AA + D + D+
Sbjct: 630 LEPLEARRAFRHLAYSKFHHVPLYLEWA-PVGVFSS--AAPQKKKLQDTPLEPAEKDEAE 686
Query: 326 DD---DAETASDDSNSSEKED-------------------LPS------NADFDEEVDIA 357
+ D E+ D++ + E D LP N +FD +
Sbjct: 687 PETVPDGESPEDENPTEEGVDNSSANMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKL 746
Query: 358 RKVLNKLTST-----------TGSLPSLSDDSALVKGNKEQDSDKTVNE-SAKVSDVSKL 405
+ V +K+ + TG+L LS V+ K + + K + + + D KL
Sbjct: 747 KGVFSKVGTVKSCSISKKKNKTGAL--LSMGFGFVEYRKPEQAQKALKQLQGHIVDGHKL 804
Query: 406 ----NSSKSKP---KSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VP 457
+ +KP + K+ + + I + N+PF + E+++ FS FGE+ + +P
Sbjct: 805 EVRISERATKPAVTSARKKQVPRTQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLP 864
Query: 458 VLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV--------LKALD 509
T +G GF+ F T + A A +A ++ L GR+L + L+AL
Sbjct: 865 KKMTGTGTHRGFGFVDFLTKQDAKRAFNALCHST----HLYGRRLVLEWADSEVTLQALR 920
Query: 510 KKL-AHDKEIDKSK 522
+K AH E K K
Sbjct: 921 RKTAAHFHEPPKKK 934
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+P+ + +++ +FS G + ++ P ++ T KGFAFV F A A +
Sbjct: 403 RLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYSE 462
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAAAG 307
+GQ F R + V + K S +A G
Sbjct: 463 VDGQVFQGRMLHVLPSTIKKEASEDASALG 492
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+F+ NLP+ E++++ FS +G + + +TK+PKG F+ F E A A S
Sbjct: 404 LFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYSEV 463
Query: 488 KTTSGLGIFLKGRQLTVLKALDKKLAHD 515
G +GR L VL + KK A +
Sbjct: 464 D-----GQVFQGRMLHVLPSTIKKEASE 486
>gi|346322022|gb|EGX91621.1| ribosome biogenesis protein Nop4 [Cordyceps militaris CM01]
Length = 818
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query: 218 KLIIRNIPFKAKVNE-IKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
KLI+RN+P+ + +E + +F G + +P D G KGF FV K++AE+A++
Sbjct: 146 KLIVRNLPWSIRNSEQLGHLFRSYGRIKFADLPK--DKGKLKGFGFVTLRGKKNAENALE 203
Query: 277 KFNGQKFGKRPIAVDWAVPKNIY 299
NG++ R +AVDWAV K+ +
Sbjct: 204 GVNGKEIDGRTLAVDWAVDKSTW 226
>gi|332250675|ref|XP_003274476.1| PREDICTED: probable RNA-binding protein 19 [Nomascus leucogenys]
Length = 997
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A EI+++FS G + V +P T TG +GF FV F K+DA+ A
Sbjct: 870 KILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFN 929
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 930 ALCHSTHLYGRR-LVLEWA 947
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 151/372 (40%), Gaps = 71/372 (19%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q E SKT ++++N+P E+++ F G + V +P T A V+F
Sbjct: 616 QAAAERSKTV---ILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGIT------AIVEF 666
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGG--------AAAGVQNKGDGNSD 317
+A A + KF P+ ++WA P ++SS A + K +
Sbjct: 667 LEPLEARKAFRHLAYSKFHHVPLYLEWA-PVGVFSSAAPQKKKLQDAPSEPMEKDPAEPE 725
Query: 318 SGSDDDLGDDDAETASDDSNSSEK------------EDLPS------NADFDEEVDIARK 359
+ D +D+ T NSS K E LP N +FD + ++
Sbjct: 726 TVPDGKTPEDENPTEEGADNSSAKMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKE 785
Query: 360 VLNKLTST-----------TGSLPSLSDDSALVKGNKEQDSDKTVNE-SAKVSDVSKL-- 405
V +K+ + G+L LS V+ K + + K + + + D KL
Sbjct: 786 VFSKVGTVKSCSISKKKNKAGAL--LSMGFGFVEYRKPEQTQKALKQLQGHIVDGHKLEV 843
Query: 406 --NSSKSKP---KSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VPVL 459
+ +KP + K+ + + I + N+PF + E+++ FS FGE+ + +P
Sbjct: 844 RISERATKPAVTSARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKK 903
Query: 460 HQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV--------LKALDKK 511
T +G GF+ F T + A A +A ++ L GR+L + L+AL +K
Sbjct: 904 MTGTGTHRGFGFVDFLTKQDAKRAFNALCHST----HLYGRRLVLEWADSEVTLQALRRK 959
Query: 512 L-AHDKEIDKSK 522
AH E K K
Sbjct: 960 TAAHFHEPPKKK 971
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+F+ NLP+ E++++ FS +G + + +TK+PKG GF+ F E A A S
Sbjct: 441 LFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFGFVTFMFPEHAVKAYSEV 500
Query: 488 KTTSGLGIFLKGRQLTVLKALDKKLAHD 515
G +GR L VL + KK A +
Sbjct: 501 D-----GQVFQGRMLHVLPSTIKKEASE 523
Score = 45.8 bits (107), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+P+ + +++ +FS G + ++ P ++ T KGF FV F A A +
Sbjct: 440 RLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFGFVTFMFPEHAVKAYSE 499
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAAAG 307
+GQ F R + V + K S +A G
Sbjct: 500 VDGQVFQGRMLHVLPSTIKKEASEDASALG 529
>gi|297693058|ref|XP_002823848.1| PREDICTED: probable RNA-binding protein 19 [Pongo abelii]
Length = 999
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A EI+++FS G + V +P T TG +GF FV F K+DA+ A
Sbjct: 872 KILVRNIPFQAHSREIRELFSTFGELKTVRLPKKVTGTGTHRGFGFVDFLTKQDAKRAFN 931
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 932 ALCHSTHLYGRR-LVLEWA 949
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 151/372 (40%), Gaps = 71/372 (19%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q E SKT ++++N+P E+++ F G + V +P T A V+F
Sbjct: 618 QAAAERSKTV---ILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGIT------AIVEF 668
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGG--------AAAGVQNKGDGNSD 317
+A A + KF P+ ++WA P ++SS A + K +
Sbjct: 669 LEPLEARKAFRHLAYSKFHHVPLYLEWA-PIGVFSSTAPQKKKLQDAPSEPMEKDPAEPE 727
Query: 318 SGSDDDLGDDDAETASDDSNSSEK------------EDLPS------NADFDEEVDIARK 359
+ D +D+ T NSS K E LP N +FD + ++
Sbjct: 728 TVPDGKTPEDENPTEEGADNSSAKMEEEEEEEEEEEERLPGCTLFIKNLNFDTTEEKLKE 787
Query: 360 VLNKLTST-----------TGSLPSLSDDSALVKGNKEQDSDKTVNE-SAKVSDVSKL-- 405
V +K+ + G+L LS V+ K + + K + + + D KL
Sbjct: 788 VFSKVGTVKSCSISKKKNKAGAL--LSMGFGFVEYRKPEQAQKALKQLQGHIVDGHKLEV 845
Query: 406 --NSSKSKP---KSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VPVL 459
+ +KP + K+ + + I + N+PF + E+++ FS FGE+ + +P
Sbjct: 846 RISERATKPAVTSARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKK 905
Query: 460 HQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV--------LKALDKK 511
T +G GF+ F T + A A +A ++ L GR+L + L+AL +K
Sbjct: 906 VTGTGTHRGFGFVDFLTKQDAKRAFNALCHST----HLYGRRLVLEWADSEVTLQALRRK 961
Query: 512 L-AHDKEIDKSK 522
AH E K K
Sbjct: 962 TAAHFHEPPKKK 973
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+P+ + +++ +FS G + ++ P ++ T KGFAF+ F A A +
Sbjct: 442 RLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSE 501
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAAAG 307
+GQ F R + V + K S +A G
Sbjct: 502 VDGQVFQGRMLHVLPSTIKKEASEDASALG 531
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+F+ NLP+ E++++ FS +G + + +TK+PKG F+ F E A A S
Sbjct: 443 LFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEV 502
Query: 488 KTTSGLGIFLKGRQLTVLKALDKKLAHD 515
G +GR L VL + KK A +
Sbjct: 503 D-----GQVFQGRMLHVLPSTIKKEASE 525
>gi|170592088|ref|XP_001900801.1| RNA recognition motif. [Brugia malayi]
gi|158591668|gb|EDP30272.1| RNA recognition motif [Brugia malayi]
Length = 421
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 107/250 (42%), Gaps = 31/250 (12%)
Query: 113 DCSQKQRVARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTY-------PLPKEELEQHGL 165
D + RTV +G L + + + L G IG V P E H
Sbjct: 65 DTGSEDHQPRTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGTNDPYAFVEFADH-- 122
Query: 166 AQEGCKMDASAVLYTTVKSACA-SVALLHQKEIKGGTVWARQLGGEG--SKTQKWKLIIR 222
YT ++ A + +L +KE+K WA + G + ++ + + +
Sbjct: 123 -------------YTAAQALQAMNKRVLLEKEMK--VNWATEPGSQAKVDTSKHFHVFVG 167
Query: 223 NIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK 282
++ + +KD F+P G V + + + T SKG+ FV + + +AE AI++ NGQ
Sbjct: 168 DLSPEVDNKALKDAFAPFGEVSDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQMNGQW 227
Query: 283 FGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDDSNSSEKE 342
G+R I +WA K + GA G + + N D + D+ + + ++S+ E
Sbjct: 228 LGRRTIRTNWATRKP--TGTGAGDGQYGRSELNYDDVYNQTGPDNTSVYVGNVNSSANDE 285
Query: 343 DLPSNADFDE 352
DL A FD+
Sbjct: 286 DL--RAAFDK 293
>gi|114647138|ref|XP_522578.2| PREDICTED: probable RNA-binding protein 19 [Pan troglodytes]
gi|410216396|gb|JAA05417.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410216398|gb|JAA05418.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410263956|gb|JAA19944.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410263958|gb|JAA19945.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410292596|gb|JAA24898.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410292598|gb|JAA24899.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410339181|gb|JAA38537.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410339183|gb|JAA38538.1| RNA binding motif protein 19 [Pan troglodytes]
Length = 961
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A EI+++FS G + V +P T TG +GF FV F K+DA+ A
Sbjct: 834 KILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFN 893
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 894 ALCHSTHLYGRR-LVLEWA 911
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 151/373 (40%), Gaps = 72/373 (19%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q E SKT ++++N+P E+++ F G + V +P T A V+F
Sbjct: 579 QAAAERSKTV---ILVKNLPAGTVAAELQETFGRFGSLGRVLLPEGGIT------AIVEF 629
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGA--------AAGVQNKGDGNSD 317
+A A + KF P+ ++WA P ++SS + K +
Sbjct: 630 LEPLEARKAFRHLAYSKFHHVPLYLEWA-PVGVFSSAAPQKKKLQDTPSEPMEKDPAEPE 688
Query: 318 SGSDDDLGDDDAETASDDSNSSEK-------------EDLPS------NADFDEEVDIAR 358
+ D + +D+ T NSS K E LP N +FD + +
Sbjct: 689 TVPDGETPEDENPTEEGADNSSAKMGEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLK 748
Query: 359 KVLNKLTST-----------TGSLPSLSDDSALVKGNKEQDSDKTVNE-SAKVSDVSKL- 405
+V +K+ + G+L LS V+ K + + K + + V D KL
Sbjct: 749 EVFSKVGTVKSCSISKKKNKAGAL--LSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLE 806
Query: 406 ---NSSKSKP---KSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VPV 458
+ +KP + K+ + + I + N+PF + E+++ FS FGE+ + +P
Sbjct: 807 VRISERATKPAVTSARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPK 866
Query: 459 LHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV--------LKALDK 510
T +G GF+ F T + A A +A ++ L GR+L + L+AL +
Sbjct: 867 KMTGTGTHRGFGFVDFLTKQDAKRAFNALCHST----HLYGRRLVLEWADSEVTLQALRR 922
Query: 511 KL-AHDKEIDKSK 522
K AH E K K
Sbjct: 923 KTAAHFHEPPKKK 935
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+P+ + +++ +FS G + ++ P ++ T KGFAF+ F A A +
Sbjct: 403 RLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSE 462
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAAAG 307
+GQ F R + V + K S +A G
Sbjct: 463 VDGQVFQGRMLHVLPSTIKKEASEDASALG 492
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+F+ NLP+ E++++ FS +G + + +TK+PKG F+ F E A A S
Sbjct: 404 LFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEV 463
Query: 488 KTTSGLGIFLKGRQLTVLKALDKKLAHD 515
G +GR L VL + KK A +
Sbjct: 464 D-----GQVFQGRMLHVLPSTIKKEASE 486
>gi|13279134|gb|AAH04289.1| RBM19 protein [Homo sapiens]
gi|13544005|gb|AAH06137.1| RBM19 protein [Homo sapiens]
gi|190689379|gb|ACE86464.1| RNA binding motif protein 19 protein [synthetic construct]
gi|190690741|gb|ACE87145.1| RNA binding motif protein 19 protein [synthetic construct]
Length = 960
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A EI+++FS G + V +P T TG +GF FV F K+DA+ A
Sbjct: 833 KILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFN 892
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 893 ALCHSTHLYGRR-LVLEWA 910
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 149/370 (40%), Gaps = 67/370 (18%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q E SKT ++++N+P E+++ F G + V +P T A V+F
Sbjct: 579 QAAAERSKTV---ILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGTT------AIVEF 629
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGA--------AAGVQNKGDGNSD 317
+A A + KF P+ ++WA P ++SS + K +
Sbjct: 630 LEPLEARKAFRHLAYSKFHHVPLYLEWA-PVGVFSSAAPQKKKLQDTPSEPMEKDPAEPE 688
Query: 318 SGSDDDLGDDDAETASDDSNSSEK------------EDLPS------NADFDEEVDIARK 359
+ D + +D+ T NSS K E LP N +FD + ++
Sbjct: 689 TVPDGETPEDENPTEEGADNSSAKMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKE 748
Query: 360 VLNKLTSTTGSLPS---------LSDDSALVKGNKEQDSDKTVNE-SAKVSDVSKL---- 405
V +K+ + S LS V+ K + + K + + V D KL
Sbjct: 749 VFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEVRI 808
Query: 406 NSSKSKPK---SLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VPVLHQ 461
+ +KP + K+ + + I + N+PF + E+++ FS FGE+ + +P
Sbjct: 809 SERATKPAVTLARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMT 868
Query: 462 VTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV--------LKALDKKL- 512
T +G GF+ F T + A A +A ++ L GR+L + L+AL +K
Sbjct: 869 GTGTHRGFGFVDFLTKQDAKRAFNALCHST----HLYGRRLVLEWADSEVTLQALRRKTA 924
Query: 513 AHDKEIDKSK 522
AH E K K
Sbjct: 925 AHFHEPPKKK 934
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+P+ + +++ +FS G + ++ P ++ T KGFAF+ F A A +
Sbjct: 403 RLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSE 462
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAAAG 307
+GQ F R + V + K S +A G
Sbjct: 463 VDGQVFQGRMLHVLPSTIKKEASEDASALG 492
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+F+ NLP+ E++++ FS +G + + +TK+PKG F+ F E A A S
Sbjct: 404 LFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEV 463
Query: 488 KTTSGLGIFLKGRQLTVLKALDKKLAHD 515
G +GR L VL + KK A +
Sbjct: 464 D-----GQVFQGRMLHVLPSTIKKEASE 486
>gi|448878332|gb|AGE46129.1| arginine/serine-rich splicing factor SCL31 [Sorghum bicolor]
Length = 270
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L++RNIP + + E++ F G V +VY+P + TG +GF FV+F DA A
Sbjct: 42 LLVRNIPLRCRPEELRVPFERFGPVRDVYLPRDYHTGEPRGFGFVEFVDAYDASEAQYHM 101
Query: 279 NGQKFGKRPIAV 290
N Q F R I V
Sbjct: 102 NRQMFAGREITV 113
>gi|83773473|dbj|BAE63600.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 440
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 204 ARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFV 263
AR G + S L + NIPF A + + ++F G + + +P + ++G KGF +V
Sbjct: 291 ARSFGDQASPESD-TLFVGNIPFSANEDSLHEVFGQKGSILGIRLPTDPESGRPKGFGYV 349
Query: 264 KFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPK 296
+F+ +A A + NG + RP+ +D++ P+
Sbjct: 350 QFSSVEEAREAFNELNGAEIDGRPVRLDFSTPR 382
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHR-ASLEQ 54
++T++ + RGFGYV++ DA +A E K T + GRKI + +A R A+ EQ
Sbjct: 226 IMTERDTGRSRGFGYVEYTNAVDAAKAFEAKRDTEIDGRKINLDYATGRPANREQ 280
>gi|308805466|ref|XP_003080045.1| initiation factor 3g (ISS) [Ostreococcus tauri]
gi|116058504|emb|CAL53693.1| initiation factor 3g (ISS) [Ostreococcus tauri]
Length = 311
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%)
Query: 221 IRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNG 280
+ N+ + +++++F P G V +Y+ N DTG ++GFAFV + D + AI K +G
Sbjct: 232 VSNLSEDTREQDLQELFRPFGPVTRIYVAINRDTGEARGFAFVNMVNREDGQRAIDKLDG 291
Query: 281 QKFGKRPIAVDWAVPK 296
+ + V+WA P+
Sbjct: 292 YGYDNLILRVEWAAPR 307
>gi|168278697|dbj|BAG11228.1| RNA binding motif protein 19 [synthetic construct]
Length = 960
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A EI+++FS G + V +P T TG +GF FV F K+DA+ A
Sbjct: 833 KILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFN 892
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 893 ALCHSTHLYGRR-LVLEWA 910
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 149/370 (40%), Gaps = 67/370 (18%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q E SKT ++++N+P E+++ F G + V +P T A V+F
Sbjct: 579 QAAAERSKTV---ILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGTT------AIVEF 629
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGA--------AAGVQNKGDGNSD 317
+A A + KF P+ ++WA P ++SS + K +
Sbjct: 630 LEPLEARKAFRHLAYSKFHHVPLYLEWA-PVGVFSSAAPQKKKLQDTPSEPMEKDPAEPE 688
Query: 318 SGSDDDLGDDDAETASDDSNSSEK------------EDLPS------NADFDEEVDIARK 359
+ D + +D+ T NSS K E LP N +FD + ++
Sbjct: 689 TVPDGETPEDENPTEEGADNSSAKMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKE 748
Query: 360 VLNKLTSTTGSLPS---------LSDDSALVKGNKEQDSDKTVNE-SAKVSDVSKL---- 405
V +K+ + S LS V+ K + + K + + V D KL
Sbjct: 749 VFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEVRI 808
Query: 406 NSSKSKPK---SLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VPVLHQ 461
+ +KP + K+ + + I + N+PF + E+++ FS FGE+ + +P
Sbjct: 809 SERATKPAVTLARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMT 868
Query: 462 VTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV--------LKALDKKL- 512
T +G GF+ F T + A A +A ++ L GR+L + L+AL +K
Sbjct: 869 GTGTHRGFGFVDFLTKQDAKRAFNALCHST----HLYGRRLVLEWADSEVTLQALRRKTA 924
Query: 513 AHDKEIDKSK 522
AH E K K
Sbjct: 925 AHFHEPPKKK 934
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+P+ + +++ +FS G + ++ P ++ T KGFAF+ F A A +
Sbjct: 403 RLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSE 462
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAAAG 307
+GQ F R + V + K S +A G
Sbjct: 463 VDGQVFQGRMLHVLPSTIKKEASEDASALG 492
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+F+ NLP+ E++++ FS +G + + +TK+PKG F+ F E A A S
Sbjct: 404 LFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEV 463
Query: 488 KTTSGLGIFLKGRQLTVLKALDKKLAHD 515
G +GR L VL + KK A +
Sbjct: 464 D-----GQVFQGRMLHVLPSTIKKEASE 486
>gi|60098573|emb|CAH65117.1| hypothetical protein RCJMB04_3n1 [Gallus gallus]
Length = 621
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A V EI+++FS G + V +P TG +GF FV F K+DA+ A
Sbjct: 496 KILVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFLTKQDAKKAFN 555
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 556 ALCHSTHLYGRR-LVLEWA 573
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 147/361 (40%), Gaps = 64/361 (17%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q GE SKT ++++N+P E++ +F G + V +P T A V+F
Sbjct: 255 QAAGERSKTV---ILVKNLPATTSTAELEAVFGKHGSLGRVLLPTGGIT------AIVEF 305
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKG-DGNSDSGSDDDL 324
+A+ A K KF P+ ++WA P ++SS +Q K + G + +
Sbjct: 306 LEPIEAKQAFTKLAYSKFHSVPLYLEWA-PMGVFSS----PALQKKNVEALEKEGEERLV 360
Query: 325 GDDDAETASDDSNSSEKE----------DLPSNADFDEEVDIARK--VLNKLTSTTGSLP 372
D D + S++ E +P F + ++ L + S G++
Sbjct: 361 PDGDTTVKGSEETSAQDEEEDEEEDEEESIPGCTLFIKNLNFTTTEGTLKETFSKVGAVK 420
Query: 373 S-------------LSDDSALVKGNKEQDSDKTVNE-----------SAKVSDVSKLNSS 408
S LS V+ K + + K + K+S+ + +
Sbjct: 421 SCTISKKKDKAGTLLSMGFGFVEYKKPESAQKALRRLQGCIVDGHKLEVKISERAVRPAV 480
Query: 409 KSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VPVLHQVTKRPK 467
KS S K+ + + + I + N+PF E+++ FS FGE+ + +P T +
Sbjct: 481 KS---SRKKQMVKKQKTSKILVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHR 537
Query: 468 GTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETND 527
G GF+ F T + A A +A ++ L GR+L VL+ D ++ ++ + T D
Sbjct: 538 GFGFVDFLTKQDAKKAFNALCHST----HLYGRRL-VLEWADT----EETVEALRRRTAD 588
Query: 528 H 528
H
Sbjct: 589 H 589
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+PF + +++ +FS G + ++ P + T KGFAF+ + A A +
Sbjct: 79 RLFVRNLPFTSTEEDLEKIFSKYGPLSEIHFPIDRLTKKPKGFAFITYMIPEHAVKAYAE 138
Query: 278 FNGQKFGKR 286
+GQ F R
Sbjct: 139 MDGQVFQGR 147
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+F+ NLPF E++++ FS +G + + ++TK+PKG F+ + E A A +
Sbjct: 80 LFVRNLPFTSTEEDLEKIFSKYGPLSEIHFPIDRLTKKPKGFAFITYMIPEHAVKAYAEM 139
Query: 488 KTTSGLGIFLKGRQLTVLKALDKKL 512
G +GR + +L + KKL
Sbjct: 140 D-----GQVFQGRMMHLLPSTIKKL 159
>gi|392352553|ref|XP_003751242.1| PREDICTED: probable RNA-binding protein 19 [Rattus norvegicus]
Length = 955
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A EI+++FS G + V +P T TG +GF FV F K+DA+ A
Sbjct: 828 KILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFN 887
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 888 ALCHSTHLYGRR-LVLEWA 905
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 60/113 (53%), Gaps = 7/113 (6%)
Query: 404 KLNSSKSKPKSLKQTEGEDELQNT--IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQ 461
K +S+ + ++L + E E++L ++ +F+ NL + E++++ FSA+G + +
Sbjct: 378 KSSSAPWQGRTLGEHEEEEDLADSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDS 437
Query: 462 VTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAH 514
+TK+PKG F+ F E A A + G +GR L VL + KK A+
Sbjct: 438 LTKKPKGFAFVTFMFPEHAVKAYAEVD-----GQVFQGRMLHVLPSTIKKEAN 485
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+ + + +++ +FS G + ++ P ++ T KGFAFV F A A +
Sbjct: 403 RLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAE 462
Query: 278 FNGQKFGKRPIAV 290
+GQ F R + V
Sbjct: 463 VDGQVFQGRMLHV 475
>gi|30794154|ref|NP_083038.1| probable RNA-binding protein 19 [Mus musculus]
gi|73621449|sp|Q8R3C6.1|RBM19_MOUSE RecName: Full=Probable RNA-binding protein 19; AltName:
Full=RNA-binding motif protein 19
gi|19343654|gb|AAH25619.1| RNA binding motif protein 19 [Mus musculus]
gi|21707580|gb|AAH34010.1| RNA binding motif protein 19 [Mus musculus]
gi|148687830|gb|EDL19777.1| RNA binding motif protein 19 [Mus musculus]
Length = 952
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A EI+++FS G + V +P T TG +GF FV F K+DA+ A
Sbjct: 825 KILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFN 884
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 885 ALCHSTHLYGRR-LVLEWA 902
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 413 KSLKQTEGEDELQNT--IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTG 470
++L + E E++L ++ +F+ NL + E++++ FSA+G + + +TK+PKG
Sbjct: 385 RTLGENEEEEDLADSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFA 444
Query: 471 FLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLA 513
F+ F E A A + G +GR L VL + KK A
Sbjct: 445 FVTFMFPEHAVKAYAEVD-----GQVFQGRMLHVLPSTIKKEA 482
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 129/326 (39%), Gaps = 61/326 (18%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q E SKT ++ +N+P EI++ FS G + V +P T A V+F
Sbjct: 576 QAAAERSKTV---ILAKNLPAGTLAAEIQETFSRFGSLGRVLLPEGGIT------AIVEF 626
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLG 325
+A A + KF P+ ++WA P ++ + Q++ + +
Sbjct: 627 LEPLEARKAFRHLAYSKFHHVPLYLEWA-PIGVFGAAPQKKDSQHEQPAEKAEVEQETVL 685
Query: 326 DDDAETASDDSNSSE---------------KEDLPSNADFDEEVDIA--RKVLNKLTSTT 368
D + E AS + + +E +P F + ++ + + L + S
Sbjct: 686 DPEGEKASVEGAEASTGKMEEEEEEEEEEEEESIPGCTLFIKNLNFSTTEETLKGVFSKV 745
Query: 369 GSLPS-------------LSDDSALVKGNKEQDSDKTVNE-----------SAKVSDVSK 404
G++ S LS V+ K + + K + + ++S+ +
Sbjct: 746 GAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISERAT 805
Query: 405 ---LNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VPVLH 460
L S++ K KQT + I + N+PF + E+++ FS FGE+ + +P
Sbjct: 806 KPALTSTRKKQVPKKQT------TSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKM 859
Query: 461 QVTKRPKGTGFLKFKTVEAATAAVSA 486
T +G GF+ F T + A A +A
Sbjct: 860 TGTGAHRGFGFVDFITKQDAKKAFNA 885
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 198 KGGTVWARQLGGEGSKTQKW----KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTD 253
K T W + GE + + +L +RN+ + + +++ +FS G + ++ P ++
Sbjct: 377 KSTTPWQGRTLGENEEEEDLADSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSL 436
Query: 254 TGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAV 290
T KGFAFV F A A + +GQ F R + V
Sbjct: 437 TKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHV 473
>gi|291407017|ref|XP_002719829.1| PREDICTED: RBD (RNA binding domain) protein family member
(rbd-1)-like [Oryctolagus cuniculus]
Length = 1025
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A EI+++FS G + V +P T TG +GF FV F K+DA+ A
Sbjct: 807 KILVRNIPFQADSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFN 866
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 867 ALCHSTHLYGRR-LVLEWA 884
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 150/372 (40%), Gaps = 90/372 (24%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q GE SKT ++ +N+P E+++ F G + V +P T A V+F
Sbjct: 553 QAAGERSKTV---ILAKNLPAGTLAAELQETFGRFGSLGRVLLPEGGVT------AIVEF 603
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKG------------- 312
+A A + KF P+ ++WA P ++S GAA Q KG
Sbjct: 604 LEPLEARKAFRHLAYSKFHHVPLYLEWA-PVGVFS--GAAP--QKKGRRDAPAEPAAEDA 658
Query: 313 -------DGNSDSGSDDDLGDDDAETASDDSNSSEKE----DLPS------NADFDEEVD 355
D S G G D +A + E+E LP N +F +
Sbjct: 659 VEPEAVPDSESPEGEQPSEGGADGPSAEMEEEEEEEEEEEESLPGCTVFIKNLNFSTTEE 718
Query: 356 IARKVLNKL-----------TSTTGSLPSLSDDSALVKGNKEQDSDKTVNE--------- 395
++V +K+ S TG L LS V+ K + +D+ + +
Sbjct: 719 TLKEVFSKVGMVKSCSISRKKSKTGEL--LSMGFGFVEYRKPEQADRALKQLQGHVVDGH 776
Query: 396 --SAKVSDVSK---LNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFG 450
++S+ + L S++ K KQT + I + N+PF D+ E+++ FS FG
Sbjct: 777 KLEVRISERATRPALTSARKKQVPRKQT------TSKILVRNIPFQADSREIRELFSTFG 830
Query: 451 EVVSF-VPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV----- 504
E+ + +P T +G GF+ F T + A A +A ++ L GR+L +
Sbjct: 831 ELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFNALCHST----HLYGRRLVLEWADS 886
Query: 505 ---LKALDKKLA 513
L+AL +K A
Sbjct: 887 EVTLQALRRKTA 898
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 7/106 (6%)
Query: 413 KSLKQTEGEDELQNT--IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTG 470
++L + E E++L ++ +F+ NLP+ E++++ FS +G + + +TK+PKG
Sbjct: 361 RTLGENEEEEDLADSGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFA 420
Query: 471 FLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDK 516
F+ F E A A + G +GR L VL + KK A ++
Sbjct: 421 FVTFMMPEHAVKAYAGVD-----GQVFQGRMLHVLPSTIKKEASEE 461
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+P+ + +++ +FS G + ++ P ++ T KGFAFV F A A
Sbjct: 377 RLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFVTFMMPEHAVKAYAG 436
Query: 278 FNGQKFGKRPIAV 290
+GQ F R + V
Sbjct: 437 VDGQVFQGRMLHV 449
>gi|156402343|ref|XP_001639550.1| predicted protein [Nematostella vectensis]
gi|156226679|gb|EDO47487.1| predicted protein [Nematostella vectensis]
Length = 862
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 141/340 (41%), Gaps = 40/340 (11%)
Query: 207 LGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFT 266
G + K ++ +N+P+ E++ +FS G + V +P +G++ A ++
Sbjct: 538 FGQAAASRSKTVIVAKNLPYGTNAEELRTLFSAFGQLGRVILPP---SGIT---ALIEIP 591
Query: 267 CKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGD 326
A A QK KF P+ ++WA P +++ G K D ++D + + G
Sbjct: 592 EPSLARKAFQKLAYSKFKNSPLYLEWA-PLDVFVEGQLKKDSLEKTDKDADQSEEQNAGS 650
Query: 327 DDAET------ASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSAL 380
D+ +T + S S +E L V A K GSL S+
Sbjct: 651 DEEDTEGVTLFVKNLSFESTEEALKQKFAAVGPVKSATIAKKKDPKKPGSLLSMG----- 705
Query: 381 VKGNKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNT-----------IF 429
G E + + E+ K S+L+ + K + G++E + I
Sbjct: 706 -YGFVEFCNKASAQEALKSLQHSQLDGHALELKQSHRKSGKEESKRKKSAKQKQKSSKIL 764
Query: 430 ICNLPFDLDNEEVKQRFSAFGEVVSF-VPVLHQVTKRPKGTGFLKFKTVEAATAAVSASK 488
+ N+PF+ +E+++ FS FGE+ + +P T +G F+ F T + A A A
Sbjct: 765 VRNVPFEATTKEIRELFSTFGEIKTLRLPKKMTGTGPHRGFAFVDFLTKQDAKRAFEALC 824
Query: 489 TTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDH 528
T++ L GR+L + A D + ++D + T DH
Sbjct: 825 TST----HLYGRRLVLEWAED-----EDDVDTLRKRTADH 855
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 214 TQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAES 273
T W +R +PFKAK I + FSP+ V ++ + G G AFV F+ K D E
Sbjct: 250 TTPWTCKMRGLPFKAKDKHILEFFSPLKPVAIRFVMNK--KGQPSGCAFVDFSSKSDLEK 307
Query: 274 AIQK 277
A+++
Sbjct: 308 ALKR 311
>gi|226533389|ref|NP_001034357.2| RNA binding motif protein 19 [Gallus gallus]
Length = 957
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A V EI+++FS G + V +P TG +GF FV F K+DA+ A
Sbjct: 832 KILVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFLTKQDAKKAFN 891
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 892 ALCHSTHLYGRR-LVLEWA 909
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+PF + +++ +FS G + ++ P + T KGFAF+ + A A +
Sbjct: 415 RLFVRNLPFTSTEEDLEKIFSKYGPLSEIHFPIDRLTKKPKGFAFITYMIPEHAVKAYAE 474
Query: 278 FNGQKFGKR 286
+GQ F R
Sbjct: 475 MDGQVFQGR 483
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+F+ NLPF E++++ FS +G + + ++TK+PKG F+ + E A A +
Sbjct: 416 LFVRNLPFTSTEEDLEKIFSKYGPLSEIHFPIDRLTKKPKGFAFITYMIPEHAVKAYAEM 475
Query: 488 KTTSGLGIFLKGRQLTVLKALDKKL 512
G +GR + +L + KKL
Sbjct: 476 D-----GQVFQGRMMHLLPSTIKKL 495
>gi|451846216|gb|EMD59526.1| hypothetical protein COCSADRAFT_100727 [Cochliobolus sativus
ND90Pr]
Length = 828
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 211 GSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRD 270
+K K+II+N+PF+A E++ +F+P G + +V +P D S+GF F +FT KRD
Sbjct: 699 ANKAASTKIIIKNLPFEASKKEVRALFAPYGQLRSVRVPKKFDAS-SRGFGFAEFTTKRD 757
Query: 271 AESAIQKF-NGQKFGKR 286
A +A+ N G+R
Sbjct: 758 AVNAMNALKNTHLLGRR 774
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 128/302 (42%), Gaps = 41/302 (13%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
++++NIP +E++ +F G V +P TG++ A V+F A+SA
Sbjct: 486 ILVKNIPHGVTADELRKLFEEHGTVNKFLMP---PTGMT---AIVEFANVAQAKSAFMSL 539
Query: 279 NGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSG-------SDDDLGDDDAET 331
+ +K + ++ A PK+++ G A VQ + + S DL D E
Sbjct: 540 SYRKMKDSILYLEKA-PKDLFKEGVATNFVQTTPSASVPTSTQPGTKLSATDLLVDIPEP 598
Query: 332 ASDDSNSSEKEDLPSNADFDEEVDIAR--------KVLNKLTSTTGSLPSLSDDSALVKG 383
+ ++ + +L + + ++ + KV K+ G L ++ G
Sbjct: 599 EATNTATLYVRNLNFSTSTERLIEAFKPLSGFRSAKVKTKVDPKRGVL-------SMGFG 651
Query: 384 NKEQDSDKTVNESAKVSDVSKLNSSKSKPK-SLKQTEGEDELQNT----------IFICN 432
E +S +T + + D L K + K S + + +E +N I I N
Sbjct: 652 FVEFNSPETATAALRAMDGYDLEGHKLQIKASHRGADAAEERRNEDAANKAASTKIIIKN 711
Query: 433 LPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSG 492
LPF+ +EV+ F+ +G++ S V V + +G GF +F T A A++A K T
Sbjct: 712 LPFEASKKEVRALFAPYGQLRS-VRVPKKFDASSRGFGFAEFTTKRDAVNAMNALKNTHL 770
Query: 493 LG 494
LG
Sbjct: 771 LG 772
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESA 274
+L +RN+ ++ +EI++ FS G + V++P KGFAFV+F DA A
Sbjct: 302 RLYLRNLHYEVTEDEIREQFSKHGALEEVHVPLKKADSKGKGFAFVQFQNPNDAVEA 358
>gi|118381772|ref|XP_001024046.1| RNA binding motif protein [Tetrahymena thermophila]
gi|89305813|gb|EAS03801.1| RNA binding motif protein [Tetrahymena thermophila SB210]
Length = 708
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 212 SKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDA 271
++ +K ++IIRN+ F +K + G + + IP N T SKGFAFV+F K A
Sbjct: 23 AQQKKGRVIIRNLIFDISEKHLKGLLGKYGEIIEINIPVNPSTNKSKGFAFVQFANKNCA 82
Query: 272 ESAIQKFNGQKFGKRPIAVDWAVPK 296
AI + NG ++ R I +D AV K
Sbjct: 83 LKAINELNGTQWKGRNIVLDLAVSK 107
>gi|390468249|ref|XP_002753088.2| PREDICTED: probable RNA-binding protein 19 [Callithrix jacchus]
Length = 1066
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A EI+++FS G + V +P T TG +GF FV F K+DA+ A
Sbjct: 939 KILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFN 998
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 999 ALCHSTHLYGRR-LVLEWA 1016
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 149/372 (40%), Gaps = 71/372 (19%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q E SKT ++++N+P E+++ F G + V +P T A V+F
Sbjct: 685 QAAAERSKTV---ILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGIT------AIVEF 735
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGG--------AAAGVQNKGDGNSD 317
+A A + KF P+ ++WA P ++SS A K +
Sbjct: 736 LEPLEARKAFRHLAYSKFHHVPLYLEWA-PVGVFSSAAPQKKEPQDAPPEPTEKDQAEPE 794
Query: 318 SGSDDDLGDDDAETASDDSNSSEKED------------------LPSNADFDEEVDIARK 359
+ S+ + +D+ T N S K + N +FD + ++
Sbjct: 795 TASNGETPEDENPTEEGADNCSAKMEEEEEEEEEEEESLSGCTLFIKNLNFDTTEEKLKE 854
Query: 360 VLNKLTST-----------TGSLPSLSDDSALVKGNKEQDSDKTVNE-SAKVSDVSKL-- 405
V +K+ + G+L LS V+ K + + K + + + D KL
Sbjct: 855 VFSKVGTVKSCSISKKKNKAGAL--LSMGFGFVEYRKPEQAQKALKQLQGHIVDGHKLEV 912
Query: 406 --NSSKSKP---KSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VPVL 459
+ +KP + K+ + + I + N+PF + E+++ FS FGE+ + +P
Sbjct: 913 RISERATKPAVTSARKKQIPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKK 972
Query: 460 HQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV--------LKALDKK 511
T +G GF+ F T + A A +A ++ L GR+L + L+AL +K
Sbjct: 973 MTGTGTHRGFGFVDFLTKQDAKRAFNALCHST----HLYGRRLVLEWADSEVTLQALRRK 1028
Query: 512 L-AHDKEIDKSK 522
AH E K K
Sbjct: 1029 TAAHFHEPPKKK 1040
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+P+ + +++ +FS G + ++ P ++ T KGFAFV F A A +
Sbjct: 509 RLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYSE 568
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAAAG 307
+GQ F R + V + K S +A G
Sbjct: 569 VDGQVFQGRMLHVLPSTIKKETSEDASALG 598
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+F+ NLP+ E++++ FS +G + + +TK+PKG F+ F E A A S
Sbjct: 510 LFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYSEV 569
Query: 488 KTTSGLGIFLKGRQLTVLKALDKK 511
G +GR L VL + KK
Sbjct: 570 D-----GQVFQGRMLHVLPSTIKK 588
>gi|402887773|ref|XP_003907256.1| PREDICTED: probable RNA-binding protein 19 [Papio anubis]
Length = 998
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A EI+++FS G + V +P T TG +GF FV F K+DA+ A
Sbjct: 871 KILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFN 930
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 931 ALCHSTHLYGRR-LVLEWA 948
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 155/372 (41%), Gaps = 71/372 (19%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q E SKT ++++N+P E+++ F G + V +P T A V+F
Sbjct: 617 QAAAERSKTV---ILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGIT------AIVEF 667
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAA----------AGVQNKGDGN 315
+A A + KF P+ ++WA P ++SS +++ +
Sbjct: 668 LEPLEARRAFRHLAYSKFHHVPLYLEWA-PVGVFSSAAPQKKKLQDTPLEPAEKDEAEPE 726
Query: 316 SDSGSDDDLGDDDAETASDDSNSS----------EKEDLPS------NADFDEEVDIARK 359
+ + G++ E D+S+++ E+E LP N +FD + +
Sbjct: 727 TVPDGESPEGENPTEEGVDNSSANMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKG 786
Query: 360 VLNKLTST-----------TGSLPSLSDDSALVKGNKEQDSDKTVNE-SAKVSDVSKL-- 405
V +K+ + TG+L LS V+ K + + K + + + D KL
Sbjct: 787 VFSKVGTVKSCSISKKKNKTGAL--LSMGFGFVEYRKPEQAQKALKQLQGHIVDGHKLEV 844
Query: 406 --NSSKSKP---KSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VPVL 459
+ +KP + K+ + + I + N+PF + E+++ FS FGE+ + +P
Sbjct: 845 RISERATKPAVTSARKKQVPRTQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKK 904
Query: 460 HQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV--------LKALDKK 511
T +G GF+ F T + A A +A ++ L GR+L + L+AL +K
Sbjct: 905 MTGTGTHRGFGFVDFLTKQDAKRAFNALCHST----HLYGRRLVLEWADSEVTLQALRRK 960
Query: 512 L-AHDKEIDKSK 522
AH E K K
Sbjct: 961 TAAHFHEPPKKK 972
Score = 45.4 bits (106), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+P+ + +++ +FS G + ++ P ++ T KGFAFV F A +
Sbjct: 441 RLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHGVKAYSE 500
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAAAG 307
+GQ F R + V + K S +A G
Sbjct: 501 VDGQVFQGRMLHVLPSTIKKEASEDASALG 530
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+F+ NLP+ E++++ FS +G + + +TK+PKG F+ F E A S
Sbjct: 442 LFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHGVKAYSEV 501
Query: 488 KTTSGLGIFLKGRQLTVLKALDKKLAHD 515
G +GR L VL + KK A +
Sbjct: 502 D-----GQVFQGRMLHVLPSTIKKEASE 524
>gi|432094975|gb|ELK26383.1| Putative RNA-binding protein 19 [Myotis davidii]
Length = 966
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A EI+++FS G + V +P T TG +GF FV F K+DA+ A
Sbjct: 839 KILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFLTKQDAKRAFN 898
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 899 ALCHSTHLYGRR-LVLEWA 916
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 151/372 (40%), Gaps = 69/372 (18%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q E SKT ++++N+P E+++ F G + V +P T A V+F
Sbjct: 585 QPAAERSKTV---ILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGVT------AIVEF 635
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQN------KGDGNSDSG 319
+A A + KF P+ ++WA +SS + Q+ + DG
Sbjct: 636 LEPLEARKAFRHLAYSKFHHVPLYLEWAPMGVFFSSAPQSEEPQDTPAEPAEKDGAEPEP 695
Query: 320 SDDDL---GDDDAETASDDSN---------SSEKEDLPS------NADFDEEVDIARKVL 361
D G++ E + DS+ E+E LP N +FD + + V
Sbjct: 696 VPDSETREGEEPTEGGAADSSLKMEEEEEEEEEEESLPGCTLFIKNLNFDTTEETLKGVF 755
Query: 362 NKLTST-----------TGSLPSLSDDSALVKGNKEQDSDKTVNE--SAKVSDVSKL--- 405
+K+ + G+L LS V+ K + + K + + V D KL
Sbjct: 756 SKMGAVRSCSISRKKNKAGAL--LSMGFGFVEYRKPEQAQKALKQLXXGHVVDDHKLEVR 813
Query: 406 -NSSKSKP---KSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VPVLH 460
+ +KP + K+ + + I + N+PF + E+++ FS FGE+ + +P
Sbjct: 814 ISERATKPALTSARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKM 873
Query: 461 QVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV--------LKALDKKL 512
T +G GF+ F T + A A +A ++ L GR+L + L+AL +K
Sbjct: 874 TGTGAHRGFGFVDFLTKQDAKRAFNALCHST----HLYGRRLVLEWADSEVTLQALRRKT 929
Query: 513 A-HDKEIDKSKN 523
A H E K K
Sbjct: 930 AEHFHEPPKKKQ 941
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+P+ + +++ +FS G + ++ P ++ T KGFAFV F A A +
Sbjct: 409 RLFVRNLPYTSTEEDLEKIFSKYGPLSELHYPIDSLTKKPKGFAFVSFMFPEHAVKAYAE 468
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAAAG 307
+GQ F R + V + K S +A G
Sbjct: 469 VDGQVFQGRMLHVLPSTIKKEASEDASAPG 498
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+F+ NLP+ E++++ FS +G + + +TK+PKG F+ F E A A +
Sbjct: 410 LFVRNLPYTSTEEDLEKIFSKYGPLSELHYPIDSLTKKPKGFAFVSFMFPEHAVKAYAEV 469
Query: 488 KTTSGLGIFLKGRQLTVLKALDKKLAHD 515
G +GR L VL + KK A +
Sbjct: 470 D-----GQVFQGRMLHVLPSTIKKEASE 492
>gi|218885158|ref|YP_002434479.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218756112|gb|ACL07011.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 88
Score = 59.7 bits (143), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+PF A +EI+D+FS G V +V + + +TG +GF FV+ DA SA++
Sbjct: 5 LYVGNLPFSASEDEIRDLFSQHGQVLSVKLISDRETGRPRGFGFVEMEAA-DANSAVEAL 63
Query: 279 NGQKFGKRPIAVDWAVPK 296
NG FG R + V+ A P+
Sbjct: 64 NGYSFGGRALKVNEAQPR 81
Score = 44.3 bits (103), Expect = 0.21, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 424 LQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAA 483
+ ++++ NLPF +E++ FS G+V+S + + T RP+G GF++ + +A +A
Sbjct: 1 MSKSLYVGNLPFSASEDEIRDLFSQHGQVLSVKLISDRETGRPRGFGFVEMEAADANSAV 60
Query: 484 VSASKTTSGLGIFLKGRQLTVLKA 507
+ + + G GR L V +A
Sbjct: 61 EALNGYSFG------GRALKVNEA 78
Score = 40.4 bits (93), Expect = 3.2, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQR 55
+++ + + RGFG+V+ DAN AVE NG S GGR + V A RA R
Sbjct: 34 LISDRETGRPRGFGFVEMEA-ADANSAVEALNGYSFGGRALKVNEAQPRAPRPPR 87
>gi|347734520|ref|ZP_08867565.1| ss-DNA binding protein 12RNP2 [Desulfovibrio sp. A2]
gi|347516846|gb|EGY24046.1| ss-DNA binding protein 12RNP2 [Desulfovibrio sp. A2]
Length = 88
Score = 59.7 bits (143), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+PF A +EI+D+FS G V +V + + +TG +GF FV+ DA SA++
Sbjct: 5 LYVGNLPFSASEDEIRDLFSQHGQVLSVKLISDRETGRPRGFGFVEMEAA-DASSAVEAL 63
Query: 279 NGQKFGKRPIAVDWAVPK 296
NG FG R + V+ A P+
Sbjct: 64 NGYSFGGRALKVNEAQPR 81
Score = 45.4 bits (106), Expect = 0.11, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 424 LQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAA 483
+ ++++ NLPF +E++ FS G+V+S + + T RP+G GF++ + +A++A
Sbjct: 1 MSKSLYVGNLPFSASEDEIRDLFSQHGQVLSVKLISDRETGRPRGFGFVEMEAADASSAV 60
Query: 484 VSASKTTSGLGIFLKGRQLTVLKA 507
+ + + G GR L V +A
Sbjct: 61 EALNGYSFG------GRALKVNEA 78
>gi|326930082|ref|XP_003211181.1| PREDICTED: probable RNA-binding protein 19-like [Meleagris
gallopavo]
Length = 746
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A V EI+++FS G + V +P TG +GF FV F K+DA+ A
Sbjct: 621 KILVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFLTKQDAKKAFN 680
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 681 ALCHSTHLYGRR-LVLEWA 698
>gi|148237069|ref|NP_001084078.1| ELAV-like protein 1-A [Xenopus laevis]
gi|123909821|sp|Q1JQ73.1|ELV1A_XENLA RecName: Full=ELAV-like protein 1-A; AltName: Full=36 kDa
embryonic-type cytoplasmic polyadenylation
element-binding protein; Short=36 kDa eCPE-binding
protein; Short=36 kDa eCPEB; Short=p36; AltName:
Full=Protein ElrA-A; Short=ElrA
gi|94574290|gb|AAI16460.1| ElrA protein [Xenopus laevis]
Length = 337
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 84/194 (43%), Gaps = 7/194 (3%)
Query: 110 DKEDCSQKQRVARTVIIGGLLNADMAE-EVHRLAGSIGTVCSVTYPLPKE---ELEQHGL 165
D D + + RT +I L +M + E+ L SIG V S K E+ L
Sbjct: 7 DHMDDVCRDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGFEMRSSSL 66
Query: 166 AQEGCKMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIP 225
++ G + V Y K A ++ L+ ++ T+ + L I +P
Sbjct: 67 SK-GHSLGYGFVNYLNAKDAERAINTLNGLRLQSKTIKVSFARPSSESIKDANLYISGLP 125
Query: 226 FKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK--F 283
+++DMF P G + N + + TGLS+G AF++F + +AE AI FNG K
Sbjct: 126 RTMTQKDVEDMFLPFGHIINSRVLVDQATGLSRGVAFIRFDKRSEAEEAIASFNGHKPPG 185
Query: 284 GKRPIAVDWAVPKN 297
PI V +A N
Sbjct: 186 SSEPITVKFAANPN 199
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%)
Query: 212 SKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDA 271
S T W + + N+ A + MF P G V NV + + +T KGF FV T +A
Sbjct: 250 SATSGWCIFVYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEA 309
Query: 272 ESAIQKFNGQKFGKRPIAVDWAVPK 296
AI NG + G + + V + K
Sbjct: 310 AMAIASLNGYRLGDKTLQVSFKTSK 334
>gi|17531963|ref|NP_495120.1| Protein TIAR-1, isoform b [Caenorhabditis elegans]
gi|373219011|emb|CCD65016.1| Protein TIAR-1, isoform b [Caenorhabditis elegans]
Length = 376
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 66/127 (51%), Gaps = 7/127 (5%)
Query: 173 DASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSK---TQKWKLIIRNIPFKAK 229
D A L+ + S + + + ++ WA + G + SK T+ + + + ++ +
Sbjct: 60 DFIATLFNQIGSVTKTKVIFDEMKVN----WAVEPGQQQSKIDTTRHFHVFVGDLSSEVD 115
Query: 230 VNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIA 289
++++ F P G V + + +T+T SKG+ FV + + +AE AI++ NGQ G+R I
Sbjct: 116 NQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIR 175
Query: 290 VDWAVPK 296
+WA K
Sbjct: 176 TNWATRK 182
>gi|336374814|gb|EGO03150.1| hypothetical protein SERLA73DRAFT_174588 [Serpula lacrymans var.
lacrymans S7.3]
gi|336387791|gb|EGO28935.1| hypothetical protein SERLADRAFT_456184 [Serpula lacrymans var.
lacrymans S7.9]
Length = 291
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 52/91 (57%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
+ GG GS+ L + NI + N+++++F G V VY+ + +TG KGFAFV F
Sbjct: 197 RAGGTGSRDDLPTLRVTNISEDTQENDLRELFGGFGRVARVYVGRDRETGAGKGFAFVSF 256
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPK 296
+ A+ A++K +G+ + ++V W+ P+
Sbjct: 257 EDRAVAQKAMEKVHGKGYDNLILSVQWSQPR 287
>gi|298710156|emb|CBJ31866.1| trinucleotide repeat containing 4, isoform CRA_d [Ectocarpus
siliculosus]
Length = 494
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Query: 167 QEGCKMDASAVLYTTVKSACASVALLH-QKEIKGGTVWARQLGGEGSKTQKWKLIIRNIP 225
GC + Y SA A++A LH Q+ + G + EG Q+ KL + P
Sbjct: 84 HRGCAF----LTYCARVSADAAIAALHGQRRLDRGQNPLQVRPAEGQAEQENKLFVGMAP 139
Query: 226 FKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQ---K 282
A +EI+ +F+P G + +++ N D G +KG AFVK+T ++ A AI+ + Q +
Sbjct: 140 KSANEDEIRAVFAPYGTLREIHVIRNQD-GTNKGCAFVKYTTRQSALDAIEALHEQYTMQ 198
Query: 283 FGKRPIAVDWA 293
G RP+ V +A
Sbjct: 199 GGPRPLVVKFA 209
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWN--VYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
L I ++P ++ F+P G V + VYI + +G SKGF FV ++ AE+AI
Sbjct: 372 LFIYHLPQDLSDADLATAFAPFGHVLSAKVYI--DRASGESKGFGFVSYSLPSHAEAAIA 429
Query: 277 KFNGQKFGKRPIAV 290
+ NG + G + + V
Sbjct: 430 QMNGFQIGSKRLKV 443
>gi|223940412|ref|ZP_03632265.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
gi|223890907|gb|EEF57415.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
Length = 118
Score = 59.7 bits (143), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 50/79 (63%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL + N+PF N+++D FS G V V I + TG S+GFAF++ + +A++A+ +
Sbjct: 4 KLFVGNLPFSTTENDLQDHFSGAGTVIAVNIMQDRATGRSRGFAFIEMGSQAEADAAVAQ 63
Query: 278 FNGQKFGKRPIAVDWAVPK 296
++G++F R + V+ A P+
Sbjct: 64 YHGKEFQGRALTVNEARPR 82
>gi|353232427|emb|CCD79782.1| elav (embryonic lethal, abnormal vision,drosophila)-like protein
[Schistosoma mansoni]
Length = 535
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L I +P K NE++ +FS G + I ++ TG+S+G AF++F + +AE AIQ+
Sbjct: 78 LYISGLPKTMKQNELEQLFSQYGRIITARILYDNKTGISRGVAFIRFNHRYEAELAIQQL 137
Query: 279 NGQKFG--------KRPIAVDWAVPKN 297
NG + RPI V +A P N
Sbjct: 138 NGYQLPFEYSNDILNRPITVKFANPPN 164
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
E++ +FS G + + + + TG S G+AFVK++ +A+ AI K NG + I V
Sbjct: 5 EVRVLFSTCGQIESCKLIRDKLTGESLGYAFVKYSHSNEAQQAIHKLNGLSLQNKTIKVS 64
Query: 292 WAVPK-------NIYSSGGAAAGVQNK 311
A P N+Y SG QN+
Sbjct: 65 LARPNCESIKGANLYISGLPKTMKQNE 91
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 38/81 (46%)
Query: 217 WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
W + + N+ + + + + +F P G V ++ I ++ KGFAFV + +A AI
Sbjct: 267 WCIFVYNLSPEVEESNLWHLFGPFGAVQSIKIIYDITNNKCKGFAFVTMSNYEEAVLAIH 326
Query: 277 KFNGQKFGKRPIAVDWAVPKN 297
NG R + V + + N
Sbjct: 327 SLNGYVLDNRILQVSFKITNN 347
>gi|388515207|gb|AFK45665.1| unknown [Lotus japonicus]
Length = 101
Score = 59.3 bits (142), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 221 IRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNG 280
+ N+ + ++ ++F P G V VY+ + TG+S+GF FV F + DA+ AI K NG
Sbjct: 24 VTNLSEDTREPDLLELFRPFGAVSRVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNG 83
Query: 281 QKFGKRPIAVDWAVPK 296
+ + V+WA P+
Sbjct: 84 HGYDNLILRVEWATPR 99
>gi|196002047|ref|XP_002110891.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190586842|gb|EDV26895.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 170
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 50/86 (58%)
Query: 217 WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
W + + NI +A+ +++ + F+ G V N+++ + TG KG+A V+F K++A++AI
Sbjct: 74 WIVFVANIHEEAQEDDVYEKFAEYGDVKNLHLNLDRRTGFIKGYALVEFETKKEAQAAID 133
Query: 277 KFNGQKFGKRPIAVDWAVPKNIYSSG 302
NG ++ I VDW K +SG
Sbjct: 134 NLNGTNLLEQTIKVDWCFVKGPQTSG 159
>gi|344295376|ref|XP_003419388.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-binding protein
19-like [Loxodonta africana]
Length = 1089
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A EI+++FS G + V +P T TG +GF FV F K+DA+ A
Sbjct: 826 KILVRNIPFQAHSREIRELFSTFGELKTVRLPKKVTGTGAHRGFGFVDFLTKQDAKRAFN 885
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 886 ALCHSTHLYGRR-LVLEWA 903
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 151/366 (41%), Gaps = 64/366 (17%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q E SKT ++++N+P E+++ F G + V +P T A V+F
Sbjct: 579 QAAAERSKTV---MLVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGIT------AIVEF 629
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSD-------S 318
+A A + KF P+ ++WA P ++SS ++D
Sbjct: 630 LEPLEARKAFRHLAYSKFHHVPLYLEWA-PMGVFSSSSPQKREPRDTPEDTDKVEPETVP 688
Query: 319 GSDDDLGDDDAETASDDSNS------SEKEDLPS------NADFDEEVDIARKVLNKL-- 364
G++ G+ E DDS++ E+E LP N +FD ++V +K+
Sbjct: 689 GNETPEGEKPVERGEDDSSAKMEEEEEEEESLPGCTLFIKNLNFDTTEATLKEVFSKVGM 748
Query: 365 ---------TSTTGSLPSLSDDSALVKGNKEQDSDKTVNE-SAKVSDVSKLNSSKS---- 410
+ G+L LS V+ K + + K + + V D KL S
Sbjct: 749 VKSCSISRKKNKAGAL--LSMGFGFVEYRKPEHAQKALRQLQGHVVDGHKLELRISERAI 806
Query: 411 KPKSL---KQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VPVLHQVTKRP 466
KP + K+ + + I + N+PF + E+++ FS FGE+ + +P T
Sbjct: 807 KPATTSTRKKQVARKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKVTGTGAH 866
Query: 467 KGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV--------LKALDKKLA-HDKE 517
+G GF+ F T + A A +A ++ L GR+L + ++AL +K A H E
Sbjct: 867 RGFGFVDFLTKQDAKRAFNALCHST----HLYGRRLVLEWADSEVTVQALRRKTAEHFHE 922
Query: 518 IDKSKN 523
K K
Sbjct: 923 PPKKKQ 928
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 413 KSLKQTEGEDELQNT--IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTG 470
++L + E E++L ++ +F+ NLP+ EE+++ FS +G + + +TK+PKG
Sbjct: 387 RTLGENEEEEDLADSGRLFVRNLPYTSTEEELEKLFSKYGPLSELHYPIDSLTKKPKGFA 446
Query: 471 FLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHD 515
F+ F E A A + G +GR L VL + KK A +
Sbjct: 447 FITFMFPEHAVKAYAEVD-----GQVFQGRMLHVLPSTIKKEASE 486
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+P+ + E++ +FS G + ++ P ++ T KGFAF+ F A A +
Sbjct: 403 RLFVRNLPYTSTEEELEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYAE 462
Query: 278 FNGQKFGKRPIAV 290
+GQ F R + V
Sbjct: 463 VDGQVFQGRMLHV 475
>gi|337278094|ref|YP_004617565.1| RNA-binding protein [Ramlibacter tataouinensis TTB310]
gi|334729170|gb|AEG91546.1| Candidate RNA-binding protein [Ramlibacter tataouinensis TTB310]
Length = 95
Score = 59.3 bits (142), Expect = 6e-06, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 50/89 (56%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL + N+P+ +E++ FS G V + + + DTG SKGF FV+ +A+SAIQ
Sbjct: 4 KLYVGNLPYSFGDSEMQQAFSQFGTVGSAKVVMDRDTGRSKGFGFVEMGSAAEAQSAIQG 63
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAAA 306
+GQ+ G R + V+ A P + G AA
Sbjct: 64 MHGQQHGGRDLVVNEARPMEPRTGGSGAA 92
Score = 43.5 bits (101), Expect = 0.37, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 424 LQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAA 483
+ N +++ NLP+ + E++Q FS FG V S V+ + T R KG GF++ + A +A
Sbjct: 1 MGNKLYVGNLPYSFGDSEMQQAFSQFGTVGSAKVVMDRDTGRSKGFGFVEMGSAAEAQSA 60
Query: 484 VSA 486
+
Sbjct: 61 IQG 63
>gi|221057576|ref|XP_002261296.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|194247301|emb|CAQ40701.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 512
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL I ++P +K+MFSP G V V+I + TGL KG +FVKF K A AI
Sbjct: 187 KLFIGSLPKSISEESVKEMFSPYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAINS 246
Query: 278 FNGQKFGK---RPIAVDWAVPK 296
NG+K + RP+ V +A PK
Sbjct: 247 LNGKKTLEGCARPVEVRFAEPK 268
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 15/86 (17%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
+FI ++P + ++ Q FS FGE++S + T R +G F+ ++ +E+A AA+S
Sbjct: 372 NLFIFHVPNEWHQTDLIQAFSPFGELLSARIATEKSTGRNRGFAFVSYENIESAAAAIS- 430
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKL 512
Q+ AL+KKL
Sbjct: 431 --------------QMNGFMALNKKL 442
>gi|426247328|ref|XP_004017438.1| PREDICTED: probable RNA-binding protein 19 [Ovis aries]
Length = 916
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 49/79 (62%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A +EI+++FS G + V +P T TG +GF FV F K+DA+ A
Sbjct: 789 KILVRNIPFQADSHEIRELFSTFGELKTVRLPKKVTGTGTHRGFGFVDFLTKQDAKRAFN 848
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 849 ALCHSTHLYGRR-LVLEWA 866
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 155/369 (42%), Gaps = 67/369 (18%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q E SKT ++++N+P E+++ FS G + V +P T A V+F
Sbjct: 537 QAAAERSKTV---ILVKNLPAGTLAAELQETFSRFGSLGRVLLPEGGIT------AIVEF 587
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLG 325
+A A + KF P+ ++WA P ++SS Q + +G+D
Sbjct: 588 LEPLEARKAFRHLAYSKFHHVPLYLEWA-PMGVFSSP-TPQKEQPQDAPVEPAGTDRMEP 645
Query: 326 DDDAET---------ASDDSNS----------SEKEDLPS------NADFDEEVDIARKV 360
+ DAET A+ D+++ E+E LP N +FD + + V
Sbjct: 646 ETDAETPECEQPMDRAAHDASAKMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEETLKGV 705
Query: 361 LNKLTSTTGSLPS---------LSDDSALVKGNKEQDSDKTVNE-SAKVSDVSKL----N 406
+K+ + S LS V+ K + + K + + V D KL +
Sbjct: 706 FSKVGAVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEVRIS 765
Query: 407 SSKSKPK---SLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VPVLHQV 462
+KP + K+ + + I + N+PF D+ E+++ FS FGE+ + +P
Sbjct: 766 ERATKPALTAARKKQAPRKQTTSKILVRNIPFQADSHEIRELFSTFGELKTVRLPKKVTG 825
Query: 463 TKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV--------LKALDKKLA- 513
T +G GF+ F T + A A +A ++ L GR+L + L+AL +K A
Sbjct: 826 TGTHRGFGFVDFLTKQDAKRAFNALCHST----HLYGRRLVLEWADSEVSLQALRRKTAE 881
Query: 514 HDKEIDKSK 522
H E K K
Sbjct: 882 HFHEPPKKK 890
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 199 GGTVWARQLGGEGSKTQKW----KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDT 254
G W + GE + + +L +RN+P+ + +++ +FS G + ++ P ++ T
Sbjct: 338 GAKPWQGRTLGEHEEEEDLADSGRLFVRNLPYTSSEEDLEKLFSRYGPLSELHYPIDSLT 397
Query: 255 GLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAV 290
KGFAFV F A A + +GQ F R + V
Sbjct: 398 KKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHV 433
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 413 KSLKQTEGEDELQNT--IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTG 470
++L + E E++L ++ +F+ NLP+ E++++ FS +G + + +TK+PKG
Sbjct: 345 RTLGEHEEEEDLADSGRLFVRNLPYTSSEEDLEKLFSRYGPLSELHYPIDSLTKKPKGFA 404
Query: 471 FLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHD 515
F+ F E A A + G +GR L VL + KK A +
Sbjct: 405 FVTFMFPEHAVKAYAEVD-----GQVFQGRMLHVLPSTVKKEASE 444
>gi|333917516|ref|YP_004491248.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
gi|333747716|gb|AEF92893.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
Length = 179
Score = 59.3 bits (142), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL + N+P+ + N+++ FS G V + + DTG SKGF FV+ +A++A+Q
Sbjct: 4 KLYVGNLPYGVRDNDLEQAFSQFGAVTSARVMMERDTGRSKGFGFVEMGSDAEAQAAVQG 63
Query: 278 FNGQKFGKRPIAVDWAVP 295
NGQ G R + V+ A P
Sbjct: 64 MNGQPLGGRSLVVNEARP 81
Score = 45.1 bits (105), Expect = 0.13, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 424 LQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAA 483
+ N +++ NLP+ + + +++Q FS FG V S ++ + T R KG GF++ + A AA
Sbjct: 1 MGNKLYVGNLPYGVRDNDLEQAFSQFGAVTSARVMMERDTGRSKGFGFVEMGSDAEAQAA 60
Query: 484 VSASKTTSGLGIFLKGRQLTVLKA 507
V G L GR L V +A
Sbjct: 61 VQGMN-----GQPLGGRSLVVNEA 79
>gi|160901478|ref|YP_001567060.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
gi|160367062|gb|ABX38675.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
Length = 176
Score = 59.3 bits (142), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL + N+P+ + N+++ FS G V + + DTG SKGF FV+ +A++A+Q
Sbjct: 4 KLYVGNLPYGVRDNDLEQAFSQFGAVTSARVMMERDTGRSKGFGFVEMGSDAEAQAAVQG 63
Query: 278 FNGQKFGKRPIAVDWAVP 295
NGQ G R + V+ A P
Sbjct: 64 MNGQPLGGRSLVVNEARP 81
Score = 45.1 bits (105), Expect = 0.13, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 424 LQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAA 483
+ N +++ NLP+ + + +++Q FS FG V S ++ + T R KG GF++ + A AA
Sbjct: 1 MGNKLYVGNLPYGVRDNDLEQAFSQFGAVTSARVMMERDTGRSKGFGFVEMGSDAEAQAA 60
Query: 484 VSASKTTSGLGIFLKGRQLTVLKA 507
V G L GR L V +A
Sbjct: 61 VQGMN-----GQPLGGRSLVVNEA 79
>gi|356562301|ref|XP_003549410.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 401
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 113/266 (42%), Gaps = 41/266 (15%)
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNG--QKFGKRPI 288
N + F+ G + ++ + N TGLS+G+ FV+F AE +Q + G ++P
Sbjct: 87 NYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNAEQPF 146
Query: 289 AVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDD--DLGDDDAETASDDSNSSEKEDLPS 346
++WA +S+G D GSD+ DL + A+D ++S E
Sbjct: 147 RLNWAT----FSTG--------------DKGSDNVPDLSIFVGDLAADVTDSLLHETF-- 186
Query: 347 NADFDEEVDIARKVLNKLT--STTGSLPSLSDDSALVKGNKEQDSDKTVNESAKVSDVSK 404
A V A+ V + T S DD+ + + + + ++ +
Sbjct: 187 -ASVYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERTQAMTQMNGVYCSSRPMRIGAATP 245
Query: 405 LNSSKSKPKSL-----KQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VPV 458
SS + L Q+E D TIF+ L ++ +E+++Q FS +GE+VS +PV
Sbjct: 246 RKSSGHQQGGLSNGTANQSEA-DSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPV 304
Query: 459 LHQVTKRPKGTGFLKFKTVEAATAAV 484
KG GF++F A A+
Sbjct: 305 G-------KGCGFVQFANRNNAEEAL 323
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
+++ FS G + +V IP + KG FV+F + +AE A+QK NG GK+ + +
Sbjct: 286 DLRQPFSQYGEIVSVKIP------VGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLS 339
Query: 292 WA 293
W
Sbjct: 340 WG 341
>gi|341896316|gb|EGT52251.1| CBN-RNP-4 protein [Caenorhabditis brenneri]
Length = 143
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%)
Query: 208 GGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTC 267
GG + W + + NI +A +++ D FS G + N+++ + TG KG+A V++
Sbjct: 46 GGPQRSVEGWIVFVTNIHEEATEDDVHDKFSEFGKIKNIHLNLDRRTGFLKGYALVEYET 105
Query: 268 KRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGG 303
+++A AI+K N + + VDW K SSGG
Sbjct: 106 QKEANEAIEKSNDTDLLGQNVKVDWCFIKGKKSSGG 141
>gi|397570464|gb|EJK47313.1| hypothetical protein THAOC_33975 [Thalassiosira oceanica]
Length = 384
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + NI +A +++D+FSP G + VY+ + +T S+GFAFV F + DA A+ K
Sbjct: 267 LRVTNISEEASEADLQDLFSPFGRISRVYLAKDKETMQSRGFAFVSFVHREDAARAMDKL 326
Query: 279 NGQKFGKRPIAVDWA---VPKNIYSSG 302
G + + ++WA PK+ SSG
Sbjct: 327 QGHGYDHLILKLEWARPSAPKDPGSSG 353
>gi|123504802|ref|XP_001328836.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121911784|gb|EAY16613.1| hypothetical protein TVAG_434500 [Trichomonas vaginalis G3]
Length = 280
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%)
Query: 210 EGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKR 269
+ K++K L I N+P +A ++++F P G + +I + T S+G AFV+F
Sbjct: 5 DSDKSEKKTLFIANLPIEALEKHVREVFEPYGTILTAFIVNTRGTVRSRGIAFVEFEKHE 64
Query: 270 DAESAIQKFNGQKFGKRPIAVDWAVP 295
AE+A+ NG KF + I V WA P
Sbjct: 65 QAEAAMAATNGMKFWENQIRVQWAKP 90
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T+FI NLP + + V++ F +G +++ V + T R +G F++F+ E A AA++A
Sbjct: 13 TLFIANLPIEALEKHVREVFEPYGTILTAFIVNTRGTVRSRGIAFVEFEKHEQAEAAMAA 72
Query: 487 SKTTSGLGIF 496
T+G+ +
Sbjct: 73 ---TNGMKFW 79
>gi|14488165|emb|CAC42098.1| RBD protein [Chironomus tentans]
Length = 849
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 80/181 (44%), Gaps = 22/181 (12%)
Query: 130 LNADMAEE-VHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVLYTTVKSACAS 188
LN D EE + + +IGT+ S+ K ++ L G + + +A +
Sbjct: 623 LNKDTVEETIREIFKNIGTIRSIQIAKKKSTDDEKKLIPLGYGF----IQFKQASAADKA 678
Query: 189 VALLHQKEIKGGTVWA----RQLGGEGSKTQK----------WKLIIRNIPFKAKVNEIK 234
+ + KEI G + R L ++K K+++RNIPF+A NEI+
Sbjct: 679 LKTMQHKEIDGIKIELKRSDRTLNTPAHVSRKKTDNKKQEGSTKIMVRNIPFQANANEIR 738
Query: 235 DMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK--FGKRPIAVDW 292
+F G + V +P +GF F+ F K DA+SA + +G+R + ++W
Sbjct: 739 QLFQVFGELKAVRLPKKPGIDQHRGFGFIDFVTKSDAKSAFDALHHSTHLYGRR-LVLEW 797
Query: 293 A 293
A
Sbjct: 798 A 798
Score = 45.8 bits (107), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 9/105 (8%)
Query: 191 LLHQKE---IKGGTV---WARQ---LGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVG 241
HQKE +K + W Q L GE + KL RN+P+ ++++ +F G
Sbjct: 282 FTHQKEESEVKSSKINSRWQEQEEKLKGEEDICESGKLFFRNLPYTVTEDDVQTVFEKYG 341
Query: 242 LVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKR 286
V V +P + T KGF V F +A A + NG F R
Sbjct: 342 NVVEVNVPIDPTTRKIKGFGTVTFLMPENAVQAYNELNGTMFHGR 386
>gi|67537390|ref|XP_662469.1| hypothetical protein AN4865.2 [Aspergillus nidulans FGSC A4]
gi|40741753|gb|EAA60943.1| hypothetical protein AN4865.2 [Aspergillus nidulans FGSC A4]
gi|259482272|tpe|CBF76595.1| TPA: nucleolin protein Nsr1, putative (AFU_orthologue;
AFUA_3G07710) [Aspergillus nidulans FGSC A4]
Length = 524
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 45/78 (57%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+PF A + + ++F P G V + +P + ++G KGF +V+++ +A A +
Sbjct: 386 LFVGNLPFSANEDSVHEVFGPQGNVLGIRLPTDMESGRPKGFGYVQYSSVDEARKAYNEL 445
Query: 279 NGQKFGKRPIAVDWAVPK 296
G + RPI +D++ P+
Sbjct: 446 QGAEIDGRPIRLDFSTPR 463
>gi|452822795|gb|EME29811.1| splicing factor, arginine/serine-rich 2 [Galdieria sulphuraria]
Length = 211
Score = 59.3 bits (142), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 46/77 (59%)
Query: 217 WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
+ L++ NI F+ N++ +F G V + YIP N G S+GFAFV+F + DA A++
Sbjct: 27 YSLLVLNISFRTTPNDLTPLFDKYGEVVDCYIPRNRRNGHSRGFAFVRFRKEEDARKAME 86
Query: 277 KFNGQKFGKRPIAVDWA 293
+ +G++ R I V +A
Sbjct: 87 EMDGREVDGRSITVQFA 103
>gi|303275063|ref|XP_003056831.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461183|gb|EEH58476.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 96
Score = 59.3 bits (142), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 48/77 (62%)
Query: 217 WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
+ L + NI ++ V +++MF+ G + +VY+P + TG S+GFAFV+F K +AE AI+
Sbjct: 11 YSLKVDNIAYRVDVGRVREMFAAHGEIGDVYMPRDRTTGNSRGFAFVRFIDKNEAEDAIK 70
Query: 277 KFNGQKFGKRPIAVDWA 293
N ++ R I V +A
Sbjct: 71 AMNEKEIEGRAIRVAFA 87
>gi|242005811|ref|XP_002423754.1| serine/arginine rich splicing factor, putative [Pediculus humanus
corporis]
gi|212506956|gb|EEB11016.1| serine/arginine rich splicing factor, putative [Pediculus humanus
corporis]
Length = 246
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+ F+ ++++ +F G V ++YIP + + S+GFAFV+F KRDAE A+
Sbjct: 63 LKVDNLTFRTTPDDLRRVFERCGEVGDIYIPRDRFSRESRGFAFVRFYDKRDAEDALDAM 122
Query: 279 NGQKFGKRPIAVD---WAVPKNIYSSGGAAAGVQNKG 312
+G+ R + V + P + Y S G G ++G
Sbjct: 123 DGRILDGRELRVQMARYGRPSSPYRSRGRRRGDHDQG 159
>gi|406983427|gb|EKE04629.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 96
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL I N+ FK ++ ++ G V ++ I + DTG SKGF FV+ K AES ++
Sbjct: 2 KLFIGNLNFKTSEEDLMELLKEYGEVKSLQIIKDRDTGRSKGFGFVEMATKEQAESVMEN 61
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGG 303
NG +F + + VD+A K GG
Sbjct: 62 LNGAEFDGKVLKVDYAKEKEESGRGG 87
>gi|71405353|ref|XP_805302.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70868658|gb|EAN83451.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 358
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%)
Query: 223 NIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK 282
NIP K + E++ +F+P G + + + N TG S G AFV++ +A SAI+ +G++
Sbjct: 2 NIPHKMEQRELEKLFAPYGQILSAAVMRNIHTGNSLGTAFVRYASTEEAMSAIKGMSGKR 61
Query: 283 FGKRPIAVDWAVPKNIYSSGGAA 305
G R IAV WA ++ Y+ G A
Sbjct: 62 IGGRAIAVQWAKKQHDYAPVGEA 84
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 68/154 (44%), Gaps = 19/154 (12%)
Query: 169 GCKMDASAVLYTTVKSACASVALLHQKEIKGGTV---WARQLG-----GEGSKTQKWKLI 220
G + + V Y + + A +++ + K I G + WA++ GE K KL
Sbjct: 34 GNSLGTAFVRYASTEEAMSAIKGMSGKRIGGRAIAVQWAKKQHDYAPVGEARKKIS-KLF 92
Query: 221 IRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGF----AFVKFTCKRDAESAIQ 276
+RNIP ++DMFS G V +V I +T K F AF+ F AE A +
Sbjct: 93 VRNIPLDINTVVLEDMFSMYGPVKSVSIHKDTAPDCDKNFERHIAFITFLADGAAERAAE 152
Query: 277 KF-NGQKF---GKRPIAVDWA--VPKNIYSSGGA 304
N + F GK P+ V A P+ I+ G+
Sbjct: 153 AVHNTRPFPSCGKVPLMVKLAEDAPQRIHHGTGS 186
>gi|451993063|gb|EMD85538.1| hypothetical protein COCHEDRAFT_1187995 [Cochliobolus
heterostrophus C5]
Length = 828
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
K+II+N+PF+A E++ +F+P G + +V +P D S+GF F +FT KRDA +A+
Sbjct: 706 KIIIKNLPFEASKKEVRALFAPYGQLRSVRVPKKFDAS-SRGFGFAEFTTKRDAVNAMNA 764
Query: 278 F-NGQKFGKR 286
N G+R
Sbjct: 765 LKNTHLLGRR 774
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESA 274
+L +RN+ ++ +EI++ FS G + V++P G KGFAFV+F DA A
Sbjct: 302 RLYLRNLHYEVTEDEIREQFSKHGALEEVHVPLKKADGKGKGFAFVQFQNPNDAVEA 358
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 130/310 (41%), Gaps = 57/310 (18%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
++++NIP +E++ +F G V +P TG++ A V+F A++A
Sbjct: 486 ILVKNIPHGVTADELRKLFEEHGTVNKFLMP---PTGMT---AIVEFANVAQAKAAFMSL 539
Query: 279 NGQKFGKRPIAVDWAVPKNIYSSGGA--------AAGVQNKGDGNSDSGSDDDLGDDDAE 330
+ +K + ++ A PK+++ G A +A V + + D L D
Sbjct: 540 SYRKMKDSILYLEKA-PKDLFKEGVATNFVQTTPSASVSTSTQPGTKLSATDLLVDIPEP 598
Query: 331 TASDDSN--------SSEKEDLPS---------NADFDEEVDIARKVL---------NKL 364
A++ + S+ E L +A +VD R VL N
Sbjct: 599 EATNTATLYVRNLNFSTSTERLTEAFKPLSGFRSAKVKTKVDPKRGVLSMGFGFVEFNSP 658
Query: 365 TSTTGSLPSLSDDSALVKGNKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDEL 424
+ T +L ++ D ++G+K Q + S + +D ++ ++ K T+
Sbjct: 659 ETATAALRAM--DGYDLEGHKLQ-----IKASHRGADAAEERRNEDAAKKAASTK----- 706
Query: 425 QNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV 484
I I NLPF+ +EV+ F+ +G++ S V V + +G GF +F T A A+
Sbjct: 707 ---IIIKNLPFEASKKEVRALFAPYGQLRS-VRVPKKFDASSRGFGFAEFTTKRDAVNAM 762
Query: 485 SASKTTSGLG 494
+A K T LG
Sbjct: 763 NALKNTHLLG 772
>gi|426193530|gb|EKV43463.1| hypothetical protein AGABI2DRAFT_227175 [Agaricus bisporus var.
bisporus H97]
Length = 755
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 204 ARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFV 263
A+ G SK++ K+I++N+PF+A +I+D+FS G + +V +P D+ ++GFAF+
Sbjct: 619 AKNKDGVNSKSRTTKVIVKNVPFEATKKDIRDLFSAHGHLKSVRLPKKFDS-RTRGFAFL 677
Query: 264 KFTCKRDAESAIQKFNGQKFGKRPIAVDWA 293
+F + +AE+A R + ++WA
Sbjct: 678 EFVSRHEAENAFNALRHTHLLGRHLVLEWA 707
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 126/335 (37%), Gaps = 69/335 (20%)
Query: 218 KLIIRNIPFKAKVNEIKDMFS----PVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAES 273
+L+I+N+P ++ F P G++ +V + + +D G S+ F FV + +A +
Sbjct: 3 RLMIKNLPSYVTPVRLRQHFEQQGCPAGILTDVKVAYKSD-GTSRRFGFVGYKTDEEAFA 61
Query: 274 AIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAET-- 331
A F+ I V I S A A NK LG ET
Sbjct: 62 ARNWFDKTFIDSTRIHVTL-----IDGSKDAPAPRPNK---------RPRLGPSPIETNP 107
Query: 332 ----ASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQ 387
S S KE LPS A+ EV R + + + LV
Sbjct: 108 LPIRESKSDKSMVKEKLPSQAEEFLEVMKPRTKKGPIWANEAQPKDIRPQEQLV------ 161
Query: 388 DSDKTVNESAKVSDVSKL-----NSSKSKPKSLKQTEGEDELQNT--------------- 427
DK +A +SD + N+ ++ K+ +Q++ E E N
Sbjct: 162 --DKAPVNTATLSDAEWMKQRMSNNVDNEGKAFEQSDEESENPNPKPSLPDPMDVSSPQD 219
Query: 428 -----------IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKT 476
+F+ NL F ++ + F + G++ L ++K+PKG ++ F T
Sbjct: 220 VARETILRTHRLFLRNLAFSCTETDLLELFRSHGDISQVHIPLDSISKQPKGLAYVTFAT 279
Query: 477 VEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKK 511
AT+A A S +GR L +L A D++
Sbjct: 280 GADATSAYEALDKKS-----FQGRLLHILPAQDQQ 309
>gi|115473447|ref|NP_001060322.1| Os07g0623300 [Oryza sativa Japonica Group]
gi|33146621|dbj|BAC79909.1| putative splicing factor, arginine/serine-rich 2 (Splicing factor
SC35) [Oryza sativa Japonica Group]
gi|113611858|dbj|BAF22236.1| Os07g0623300 [Oryza sativa Japonica Group]
gi|215687327|dbj|BAG91873.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637485|gb|EEE67617.1| hypothetical protein OsJ_25178 [Oryza sativa Japonica Group]
Length = 275
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 47/77 (61%)
Query: 217 WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
+ L++ NI F+ +++ +F G V ++YIP + TG S+GFAFV++ + +A+ A+
Sbjct: 16 YSLLVLNITFRTTADDLSPLFEKYGEVVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVD 75
Query: 277 KFNGQKFGKRPIAVDWA 293
+ +G+ R I V +A
Sbjct: 76 RLDGRVVDGREIMVQFA 92
>gi|312371125|gb|EFR19385.1| hypothetical protein AND_22609 [Anopheles darlingi]
Length = 377
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP+ A +K++F VGLV ++ + ++ +TG KG+ F ++ K A SA++
Sbjct: 18 VFVGNIPYDATEEALKEIFCEVGLVMSMKLVYDRETGKPKGYGFCEYKDKETALSAMRNL 77
Query: 279 NGQKFGKRPIAVDWAV 294
NG FG RP+ VD A
Sbjct: 78 NGYVFGGRPLRVDNAC 93
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+P+D E +K+ F G V+S V + T +PKG GF ++K E A +A+
Sbjct: 17 SVFVGNIPYDATEEALKEIFCEVGLVMSMKLVYDRETGKPKGYGFCEYKDKETALSAMRN 76
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKK 511
G GR L V A +K
Sbjct: 77 LN-----GYVFGGRPLRVDNACTEK 96
>gi|168026218|ref|XP_001765629.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683055|gb|EDQ69468.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 288
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%)
Query: 221 IRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNG 280
+ N+ + +++++F P G + +Y+ + +TGLS+GFAF+ F + DA AI K +G
Sbjct: 209 VTNLSEDTREQDLQELFRPFGNISRIYVAFDRETGLSRGFAFINFVNRDDAIRAINKLDG 268
Query: 281 QKFGKRPIAVDWAVPK 296
+ + V+WA P+
Sbjct: 269 YGYDNLILRVEWATPR 284
>gi|389584459|dbj|GAB67191.1| RNA-binding protein [Plasmodium cynomolgi strain B]
Length = 567
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL I ++P +K+MFSP G V V+I + TGL KG +FVKF K A AI
Sbjct: 188 KLFIGSLPKSITEESVKEMFSPYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAINS 247
Query: 278 FNGQKFGK---RPIAVDWAVPK 296
NG+K + RP+ V +A PK
Sbjct: 248 LNGKKTLEGCARPVEVRFAEPK 269
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 15/85 (17%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+FI ++P + ++ Q FS FGE++S + T R +G F+ ++++E+A AA+S
Sbjct: 428 LFIFHVPNEWHQTDLIQAFSPFGELLSARIATEKSTGRNRGFAFVSYESIESAAAAIS-- 485
Query: 488 KTTSGLGIFLKGRQLTVLKALDKKL 512
Q+ AL+KKL
Sbjct: 486 -------------QMNGFMALNKKL 497
>gi|356567603|ref|XP_003552007.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
G-like [Glycine max]
Length = 290
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
++ ++F P G V VY+ + TG+S+GF FV F + DA+ AI K NG + + V+
Sbjct: 224 DLLELFRPFGPVSRVYVAIDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVE 283
Query: 292 WAVPK 296
WA P+
Sbjct: 284 WATPR 288
>gi|320581887|gb|EFW96106.1| multiple RNA-binding domain-containing protein 1 [Ogataea
parapolymorpha DL-1]
Length = 824
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
K+I++N+ F++ N+I ++FSP G + +V +P D ++GFAFV+F+ ++AESA+ +
Sbjct: 702 KIIVKNLAFESTRNDIFELFSPFGNLKSVRVPKKFDKS-ARGFAFVEFSTLKEAESAMDQ 760
Query: 278 FNGQKFGKRPIAVDWA 293
G R + +D+A
Sbjct: 761 LQGVHLLGRRLVMDFA 776
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 118/275 (42%), Gaps = 38/275 (13%)
Query: 214 TQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAES 273
+Q +L +RNI + A ++ +++F G + V+I +T TG SKGFA+VKFT DA
Sbjct: 299 SQTGRLFLRNILYSATEDDFRELFGTYGSLDEVHIAVDTRTGNSKGFAYVKFTSADDAVK 358
Query: 274 AIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETAS 333
A + + Q F R + + A K ++ +D DL + +
Sbjct: 359 AYLELDKQIFQGRLLHILPAEAKKDHTL------------------TDFDLANLPLKKQR 400
Query: 334 DDSNSSE--KEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDK 391
+ E K N+ + + V +K+ + G L ++ S+ VK +
Sbjct: 401 ELKKKYEASKAQFSWNSLYMNNDAVLESVASKMGISKGELIDPTNSSSAVK--------Q 452
Query: 392 TVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGE 451
+ E+ + DV K K + T+ D+ I + N EE+ + FSA+G+
Sbjct: 453 ALAEAHVIGDVRKYFEDKGVDLTSFNTKERDD--KVILVKNFQHGTTKEEIGELFSAYGQ 510
Query: 452 VVSFVPVLHQVTKRPKGT-GFLKFKTVEAATAAVS 485
L+++ P GT ++F+ AA AA S
Sbjct: 511 -------LNRLLMPPAGTIAIVEFRDAPAARAAFS 538
>gi|254585491|ref|XP_002498313.1| ZYRO0G07326p [Zygosaccharomyces rouxii]
gi|238941207|emb|CAR29380.1| ZYRO0G07326p [Zygosaccharomyces rouxii]
Length = 468
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+ F A ++I ++FSP G V +V IP + +T KGF +V++ A+ A++
Sbjct: 339 LFLGNLSFNADRDQIYELFSPHGEVISVRIPTHPETEQPKGFGYVQYASVDSAQKALETL 398
Query: 279 NGQKFGKRPIAVDWAVPK 296
G+ RP+ +D++ PK
Sbjct: 399 QGEYIDNRPVRLDFSTPK 416
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 41/62 (66%)
Query: 423 ELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATA 482
E +T+F+ NL F+ D +++ + FS GEV+S H T++PKG G++++ +V++A
Sbjct: 334 EPSDTLFLGNLSFNADRDQIYELFSPHGEVISVRIPTHPETEQPKGFGYVQYASVDSAQK 393
Query: 483 AV 484
A+
Sbjct: 394 AL 395
>gi|226510663|gb|ACO59906.1| eukaryotic translation initiation factor 3 subunit G [Penaeus
monodon]
Length = 292
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%)
Query: 221 IRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNG 280
+ N+ + +++D+F P G + +++ + +TG SKGFAF+ F + DA AIQ NG
Sbjct: 214 VTNLSENTREQDLQDLFRPFGDISRIFLAKDKNTGQSKGFAFINFKRREDAAKAIQVLNG 273
Query: 281 QKFGKRPIAVDWAVP 295
+ ++V+WA P
Sbjct: 274 YGYDHLILSVEWAKP 288
>gi|224091455|ref|XP_002309257.1| predicted protein [Populus trichocarpa]
gi|222855233|gb|EEE92780.1| predicted protein [Populus trichocarpa]
Length = 321
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 214 TQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAES 273
T++ KL + N+P+ +E+ ++F G V++ + ++ T S+GF FV +A+
Sbjct: 110 TEEGKLYVGNLPYSMTSSELTEVFEEAGRVFSAEVIYDRVTDRSRGFGFVTMGSVEEAKK 169
Query: 274 AIQKFNGQKFGKRPIAVDWA-VPK 296
AIQ FNG +FG R + V++ VP+
Sbjct: 170 AIQMFNGTQFGGRSVRVNFPEVPR 193
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 28/43 (65%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV 43
++ + ++ RGFG+V +E+A +A++M NGT GGR + V
Sbjct: 144 VIYDRVTDRSRGFGFVTMGSVEEAKKAIQMFNGTQFGGRSVRV 186
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 413 KSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFL 472
+++K TE + +++ NLP+ + + E+ + F G V S + +VT R +G GF+
Sbjct: 105 EAIKATE-----EGKLYVGNLPYSMTSSELTEVFEEAGRVFSAEVIYDRVTDRSRGFGFV 159
Query: 473 KFKTVEAATAAV 484
+VE A A+
Sbjct: 160 TMGSVEEAKKAI 171
>gi|395833986|ref|XP_003789998.1| PREDICTED: probable RNA-binding protein 19 [Otolemur garnettii]
Length = 959
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A EI+++FS G + V +P T TG +GF FV F K+DA+ A
Sbjct: 832 KILVRNIPFQADSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFN 891
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 892 ALCHSTHLYGRR-LVLEWA 909
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 136/335 (40%), Gaps = 74/335 (22%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q E SKT ++++N+P E+++ F G + V +P T A V+F
Sbjct: 578 QAAAERSKTV---ILVKNLPAGTLAAELQETFGHFGSLGRVLLPEGGIT------AIVEF 628
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLG 325
+A A + KF P+ ++WA P ++SS AA + D S+ D +
Sbjct: 629 LEPLEARKAFRNLAYSKFHHVPLYLEWA-PVCVFSS--AAPQKKESEDATSEPAEKDKIE 685
Query: 326 D---DDAETASDDS-------NSSEK------------EDLPS------NADFDEEVDIA 357
D+ET NSS K E LP N +FD +
Sbjct: 686 PKPVPDSETPESGKPTEGGLDNSSAKMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEETL 745
Query: 358 RKVLNKL-----------TSTTGSLPSLSDDSALVKGNKEQDSDKTVNES---------- 396
+ V +K+ + G+L LS V+ K + + K + +
Sbjct: 746 KNVFSKVGMVKSCSISKKKNKAGAL--LSMGFGFVEYRKPEQAQKALKQPQGLVVDNHKL 803
Query: 397 -AKVSDVSK---LNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEV 452
++S+ + L S++ K S KQT + I + N+PF D+ E+++ FS FGE+
Sbjct: 804 EVRISERATKPALTSARKKQVSKKQT------TSKILVRNIPFQADSREIRELFSTFGEL 857
Query: 453 VSF-VPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
+ +P T +G GF+ F T + A A +A
Sbjct: 858 KTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFNA 892
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 4/114 (3%)
Query: 198 KGGTVW-ARQLGG---EGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTD 253
+G T W R LG E +L +RN+P+ + +++ +FS G + ++ P ++
Sbjct: 379 RGTTPWQGRTLGDNEEEEDLADSGRLFVRNLPYTSTEEDLEKLFSKFGPLSEIHYPIDSL 438
Query: 254 TGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAG 307
KGFAFV F A A + +GQ F R + V + K S +A G
Sbjct: 439 IKKPKGFAFVTFMFPEHAVKAYTEVDGQVFQGRMLHVLPSTIKKEASEDASAPG 492
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 413 KSLKQTEGEDELQNT--IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTG 470
++L E E++L ++ +F+ NLP+ E++++ FS FG + + + K+PKG
Sbjct: 387 RTLGDNEEEEDLADSGRLFVRNLPYTSTEEDLEKLFSKFGPLSEIHYPIDSLIKKPKGFA 446
Query: 471 FLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHD 515
F+ F E A A T G +GR L VL + KK A +
Sbjct: 447 FVTFMFPEHAVKAY-----TEVDGQVFQGRMLHVLPSTIKKEASE 486
>gi|193624932|ref|XP_001949363.1| PREDICTED: probable RNA-binding protein 19-like [Acyrthosiphon
pisum]
Length = 831
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 138/313 (44%), Gaps = 57/313 (18%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
++++N+P E+KD+FS GLV V +P + TGL ++F +A++A ++
Sbjct: 504 ILVKNLPADTTELELKDIFSKYGLVNRVVLPPSGVTGL------IEFVQNSEAKTAFRQL 557
Query: 279 NGQKFGKRPIAVDWA-------VPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAET 331
KF P+ ++WA VP+NI+ + N D+ D D + D
Sbjct: 558 AYSKFKHLPLYLEWAPDKVLTDVPQNIHEETFPSYT-------NKDTEDDIDEPESDTTL 610
Query: 332 ASDDSNSSEKEDLPSNADFDE-----EVDIARKVLNKLTSTTGSLPS--LSDDSALVKGN 384
+ N + E+ + F+ V +ARK +LP LS ++
Sbjct: 611 FIKNINFNTTEEHITK-HFEPCGKIANVTVARK-------KDPNLPGKFLSMGYGFIQFY 662
Query: 385 KEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQT----------EGEDELQNT-IFICNL 433
++ K+VNE+ K +S L++ + K +T +G+ ++T I + N+
Sbjct: 663 RQ----KSVNEALKTKQLSMLDNHSIELKRSNRTLQSATVAERKQGKSYEESTKILVRNI 718
Query: 434 PFDLDNEEVKQRFSAFGEVVSF-VPVLHQVTKRPKGTGFLKFKT-VEAATAAVSASKTTS 491
PF +EV + F FGE+ +P T +G F+++ + EA A S ++T
Sbjct: 719 PFQASIQEVIELFKTFGELKGLRMPKKMVGTGTHRGFAFVEYNSKTEAKAAMESMCQSTH 778
Query: 492 GLGIFLKGRQLTV 504
L GR+L +
Sbjct: 779 -----LYGRRLVL 786
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 60/102 (58%), Gaps = 6/102 (5%)
Query: 195 KEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TD 253
+ ++ TV R+ G S + K+++RNIPF+A + E+ ++F G + + +P
Sbjct: 691 RTLQSATVAERKQGK--SYEESTKILVRNIPFQASIQEVIELFKTFGELKGLRMPKKMVG 748
Query: 254 TGLSKGFAFVKFTCKRDAESAIQKF--NGQKFGKRPIAVDWA 293
TG +GFAFV++ K +A++A++ + +G+R + ++WA
Sbjct: 749 TGTHRGFAFVEYNSKTEAKAAMESMCQSTHLYGRR-LVLEWA 789
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Query: 394 NESAKVSDVSKLNSSKSKPKSLKQTEG---EDELQNT--IFICNLPFDLDNEEVKQRFSA 448
NE+ + + + LN K P KQT+ E+ + + IF+ NLPF EE++ F
Sbjct: 286 NEADDLEENNNLN--KRNPDWQKQTDSLIHEESIAESGRIFVRNLPFITTEEELQTVFEK 343
Query: 449 FGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVL 505
+G V + + +++++ KG G + + E A A T G GR + +L
Sbjct: 344 YGPVTEVIIPIDKISRQVKGYGLITYLMPEHAVKAY-----TELDGTIFHGRMMHLL 395
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 181 TVKSACASVALLHQKEIKGGT-VWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSP 239
T K A A+++ +IK G A L G KT+ +++R +P+K K +K+ F P
Sbjct: 178 TNKIANANISDFEYLKIKSGKKSEADILDNPGIKTEYHTIVVRGLPYKVKKAMLKEFFKP 237
Query: 240 VGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK----FNGQKFGKRPI 288
+ L ++ +P KG A++ F K DAE + K NG++ P+
Sbjct: 238 LKLD-SIRLPPKI-----KGVAYIGFKNKCDAEQCLIKNKSFLNGKRVLLYPM 284
>gi|298708752|emb|CBJ30714.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 270
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%)
Query: 216 KWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAI 275
K L++RN+ F+ +V+++K +F+ G V +VY+P + T +GFAFV+F DA A
Sbjct: 32 KVSLLVRNLTFRTRVDDVKRIFTDFGDVRDVYLPLDFGTQKPRGFAFVEFYDPGDAAHAR 91
Query: 276 QKFNGQKFGKRPIAVDWA 293
+ +G R I+V +A
Sbjct: 92 DRLDGYNLDGRNISVLYA 109
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++ + NL F ++VK+ F+ FG+V L T++P+G F++F + AA +
Sbjct: 34 SLLVRNLTFRTRVDDVKRIFTDFGDVRDVYLPLDFGTQKPRGFAFVEF--YDPGDAAHAR 91
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNE 524
+ G L GR ++VL A +K+ D+ + K + E
Sbjct: 92 DRLD---GYNLDGRNISVLYAQEKRKRPDEMVHKERVE 126
>gi|393909208|gb|EFO19127.2| hypothetical protein LOAG_09365 [Loa loa]
Length = 421
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 107/250 (42%), Gaps = 31/250 (12%)
Query: 113 DCSQKQRVARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTY-------PLPKEELEQHGL 165
D + RTV +G L + + + L G IG V P E H
Sbjct: 65 DTGSEDHQPRTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGTNDPYAFVEFADH-- 122
Query: 166 AQEGCKMDASAVLYTTVKSACA-SVALLHQKEIKGGTVWARQLGGEG--SKTQKWKLIIR 222
YT ++ A + +L +KE+K WA + G + ++ + + +
Sbjct: 123 -------------YTAAQALQAMNKRVLLEKEMK--VNWATEPGSQAKVDTSKHFHVFVG 167
Query: 223 NIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK 282
++ + +KD F+P G V + + + T SKG+ FV + + +AE AI++ NGQ
Sbjct: 168 DLSPEVDNKALKDAFAPFGEVSDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQMNGQW 227
Query: 283 FGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDDSNSSEKE 342
G+R I +WA K + GA G + + N D + D+ + + ++S+ E
Sbjct: 228 LGRRTIRTNWATRKP--TGTGAGDGQYGRTELNYDDVYNQTGPDNTSVYVGNVNSSANDE 285
Query: 343 DLPSNADFDE 352
DL A FD+
Sbjct: 286 DL--RAAFDK 293
>gi|312371659|gb|EFR19788.1| hypothetical protein AND_21810 [Anopheles darlingi]
Length = 440
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 87/187 (46%), Gaps = 21/187 (11%)
Query: 117 KQRVARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASA 176
++ +T+ +G L + E + L +GTV S + +E +
Sbjct: 3 EESYPKTLYVGNLDTSVTEELLCTLFSQMGTVKSCK------------IIREASNDPYAF 50
Query: 177 VLYTTVKSACASVALLHQ-----KEIKGGTVWARQLGGEGSK--TQKWKLIIRNIPFKAK 229
+ Y + SA ++A +++ KEIK WA G + +Q + + + ++ + +
Sbjct: 51 IEYASHTSAQTALAAMNKRFFLKKEIK--VNWATSPGNQPKTDTSQHYHIFVGDLSPEIE 108
Query: 230 VNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIA 289
+++ F+P G + N I + T S+G+AFV F K +AE+AIQ NGQ G R I
Sbjct: 109 TETLREAFAPFGEISNCRIVRDPQTLKSRGYAFVSFVKKAEAENAIQMMNGQWLGSRSIR 168
Query: 290 VDWAVPK 296
+W+ K
Sbjct: 169 TNWSTRK 175
>gi|449268059|gb|EMC78930.1| putative RNA-binding protein 19, partial [Columba livia]
Length = 922
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A V EI+++FS G + V +P TG +GF FV F K+DA+ A
Sbjct: 827 KILVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFLTKQDAKKAFN 886
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 887 ALCHSTHLYGRR-LVLEWA 904
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+PF + +++ +FS G + +++ P + T KGFAFV + A A +
Sbjct: 407 RLFVRNLPFTSTEEDLEKIFSKYGPLSDIHFPIDRLTKKPKGFAFVTYMIPEHAVKAYAE 466
Query: 278 FNGQKFGKR 286
+GQ F R
Sbjct: 467 LDGQVFQGR 475
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 145/359 (40%), Gaps = 57/359 (15%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q E SKT ++++N+P V E++D+F G + V +P T A V+F
Sbjct: 583 QAAAERSKTV---ILVKNLPAGTTVAELEDVFGKHGSLGRVLLPEGGVT------AIVEF 633
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAV---------PKNIYSSGGAAAGVQNKGDGNS 316
+A+ A + +F P+ ++WA PK + + D ++
Sbjct: 634 LELTEAKQAFMRLAYSRFHSVPLYLEWAPMGVFVNPTPPKKSPEAPEKEGKAKPVPDPDT 693
Query: 317 DSGSDDDLGDDDAETASDDSNSSEKEDLPS------NADFDEEVDIARKVLNKLTSTTGS 370
DS E ++ E+E +P N +F D R+ +K+ +
Sbjct: 694 DSAVKGSEEMAAQEEEKEEEEEEEEESIPGCTLFIKNLNFATTEDTLRETFSKVGAVKSC 753
Query: 371 LPSLSDDSA---------LVKGNKEQDSDKTVNE-----------SAKVSDVSKLNSSKS 410
S D A V+ K + + K + K+S+ + + KS
Sbjct: 754 TISKKKDKAGALLSMGFGFVEYKKPEGAQKALRRLQGCTVDGHKLEVKISERALRPTVKS 813
Query: 411 KPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VPVLHQVTKRPKGT 469
S K+ + + + I + N+PF E+++ FS FGE+ + +P T +G
Sbjct: 814 ---SRKKQTVKKQTTSKILVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGF 870
Query: 470 GFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDH 528
GF+ F T + A A +A ++ L GR+L VL+ D ++ ++ + +T DH
Sbjct: 871 GFVDFLTKQDAKKAFNALCHST----HLYGRRL-VLEWADT----EETVEALRRKTADH 920
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+F+ NLPF E++++ FS +G + + ++TK+PKG F+ + E A A +
Sbjct: 408 LFVRNLPFTSTEEDLEKIFSKYGPLSDIHFPIDRLTKKPKGFAFVTYMIPEHAVKAYAEL 467
Query: 488 KTTSGLGIFLKGRQLTVLKALDKK 511
G +GR + +L + +K
Sbjct: 468 D-----GQVFQGRMMHLLPSTIRK 486
>gi|156084456|ref|XP_001609711.1| RNA recognition motif containing protein [Babesia bovis]
gi|154796963|gb|EDO06143.1| RNA recognition motif containing protein [Babesia bovis]
Length = 253
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 45/74 (60%)
Query: 210 EGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKR 269
E KTQ + ++IRN+ + + +E+++ F G + +VY+P + +G+ +GF FV+F +
Sbjct: 2 EKEKTQGYSVLIRNLKYSTRASEVREAFECFGKIRDVYLPQDYSSGMPRGFGFVEFVEEA 61
Query: 270 DAESAIQKFNGQKF 283
A AI+K + F
Sbjct: 62 AALDAIRKMDNTTF 75
>gi|395513917|ref|XP_003761168.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-binding protein 19
[Sarcophilus harrisii]
Length = 954
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 5/105 (4%)
Query: 192 LHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN 251
+ ++ IK ARQ K + K+++RNIPF+A EI+++FS G + V +P
Sbjct: 795 ISERAIKPVVTSARQRQ-TAHKQKTSKILVRNIPFQANKQEIRELFSTFGELKTVRLPKK 853
Query: 252 -TDTGLSKGFAFVKFTCKRDAESAIQKF--NGQKFGKRPIAVDWA 293
T TG +GF FV F K+DA+ A + +G+R + ++WA
Sbjct: 854 MTGTGPHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRR-LVLEWA 897
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 157/373 (42%), Gaps = 63/373 (16%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
++++N+P + +E++D+FS G + V +P T A V++ +A A
Sbjct: 577 ILVKNLPAGTQASELRDIFSRHGSLGRVLLPEGGVT------AIVEYLEPLEARRAFTSL 630
Query: 279 NGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGN------SDSGSDDDLGDDDAETA 332
KF P+ ++WA P ++SS Q++ G ++S + + D E A
Sbjct: 631 AYSKFHDAPLYLEWA-PMGVFSSPAPLKKEQDQSGGQEAAQVEAESVTCPEAQRPDGEAA 689
Query: 333 SDDSNSSEKE-------------DLPS------NADFDEEVDIARKVLNKLTSTTGSLPS 373
+ + E+ LP N +F ++ ++V +K+ + S
Sbjct: 690 ENTPATPEEPNAPAEEEEEEEEESLPGCTLFIKNLNFSTTEEMLKEVFSKVGTVKSCTVS 749
Query: 374 ---------LSDDSALVKGNKEQDSDKTVNE-SAKVSDVSKLNSSKS----KP--KSLKQ 417
LS V+ K + + K + + V D KL S KP S +Q
Sbjct: 750 KKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGSVVDGHKLEVKISERAIKPVVTSARQ 809
Query: 418 TEGEDELQNT-IFICNLPFDLDNEEVKQRFSAFGEVVSF-VPVLHQVTKRPKGTGFLKFK 475
+ + + + I + N+PF + +E+++ FS FGE+ + +P T +G GF+ F
Sbjct: 810 RQTAHKQKTSKILVRNIPFQANKQEIRELFSTFGELKTVRLPKKMTGTGPHRGFGFVDFL 869
Query: 476 TVEAATAAVSASKTTSGLGIFLKGRQLTV--------LKALDKKLA-HDKEIDKSKNETN 526
T + A A +A ++ L GR+L + ++AL +K A H + + K N
Sbjct: 870 TKQDAKRAFNALCHST----HLYGRRLVLEWADTEETVQALRRKTAQHFHDPGQKKQSXN 925
Query: 527 DHRNLYLAKEGLI 539
+L + GLI
Sbjct: 926 LIDDLTVKSSGLI 938
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+P+ + +++ +F+ G + ++ P + T KGFAFV + A A +
Sbjct: 392 RLFVRNLPYTSTEEDLEKIFAKYGPLSEIHYPIDGLTKKPKGFAFVTYMFPEHAVKAFAE 451
Query: 278 FNGQKFGKRPIAV 290
+GQ F R + V
Sbjct: 452 VDGQVFQGRMLHV 464
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+F+ NLP+ E++++ F+ +G + + +TK+PKG F+ + E A A +
Sbjct: 393 LFVRNLPYTSTEEDLEKIFAKYGPLSEIHYPIDGLTKKPKGFAFVTYMFPEHAVKAFAEV 452
Query: 488 KTTSGLGIFLKGRQLTVLKALDKK 511
G +GR L VL + KK
Sbjct: 453 D-----GQVFQGRMLHVLPSTIKK 471
>gi|384253185|gb|EIE26660.1| hypothetical protein COCSUDRAFT_12101, partial [Coccomyxa
subellipsoidea C-169]
Length = 93
Score = 58.9 bits (141), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 46/82 (56%)
Query: 215 QKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESA 274
+ W + I + +A ++ D F+ G V N+Y+ + TG KG+A V++ K++A+ A
Sbjct: 3 EGWVIFIGGVHEEASEEDLHDTFAEFGEVKNIYLNLDRRTGYVKGYAMVEYVTKKEAQDA 62
Query: 275 IQKFNGQKFGKRPIAVDWAVPK 296
I NGQ+F +P+ V W K
Sbjct: 63 IDNMNGQEFMTQPLLVTWCFVK 84
>gi|388512737|gb|AFK44430.1| unknown [Medicago truncatula]
Length = 291
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL + N PF ++ +F G V + +N T LS+GF FV +AESA++K
Sbjct: 110 KLFVGNFPFDVDSEKLAMLFGQAGTVEIAEVIYNRQTDLSRGFGFVTMNTVEEAESAVEK 169
Query: 278 FNGQKFGKRPIAVDWAVPK 296
FNG + R + V+ A PK
Sbjct: 170 FNGYDYNGRSLVVNKASPK 188
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 5/109 (4%)
Query: 402 VSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQ 461
V+K + S+P+ ++ E I++ NL +++DN ++Q FS G++VS V +
Sbjct: 182 VNKASPKGSRPERTERAPRTFEPVLRIYVANLAWEVDNSRLEQVFSEHGKIVSARVVYDR 241
Query: 462 VTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDK 510
T R +G GF+ A++A S L+GR + V A D+
Sbjct: 242 ETGRSRGFGFVTMSDETEMNDAIAALDGQS-----LEGRTIRVSVAEDR 285
>gi|312086091|ref|XP_003144941.1| hypothetical protein LOAG_09365 [Loa loa]
Length = 394
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 107/250 (42%), Gaps = 31/250 (12%)
Query: 113 DCSQKQRVARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTY-------PLPKEELEQHGL 165
D + RTV +G L + + + L G IG V P E H
Sbjct: 38 DTGSEDHQPRTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGTNDPYAFVEFADH-- 95
Query: 166 AQEGCKMDASAVLYTTVKSACA-SVALLHQKEIKGGTVWARQLGGEG--SKTQKWKLIIR 222
YT ++ A + +L +KE+K WA + G + ++ + + +
Sbjct: 96 -------------YTAAQALQAMNKRVLLEKEMK--VNWATEPGSQAKVDTSKHFHVFVG 140
Query: 223 NIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK 282
++ + +KD F+P G V + + + T SKG+ FV + + +AE AI++ NGQ
Sbjct: 141 DLSPEVDNKALKDAFAPFGEVSDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQMNGQW 200
Query: 283 FGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDDSNSSEKE 342
G+R I +WA K + GA G + + N D + D+ + + ++S+ E
Sbjct: 201 LGRRTIRTNWATRKP--TGTGAGDGQYGRTELNYDDVYNQTGPDNTSVYVGNVNSSANDE 258
Query: 343 DLPSNADFDE 352
DL A FD+
Sbjct: 259 DL--RAAFDK 266
>gi|225459316|ref|XP_002285794.1| PREDICTED: uncharacterized protein LOC100243776 [Vitis vinifera]
gi|302141951|emb|CBI19154.3| unnamed protein product [Vitis vinifera]
Length = 257
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 217 WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
+ L++ NI F+ +++ +F G V +V+IP + TG S+GFAFV++ +A+ A++
Sbjct: 16 YSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVE 75
Query: 277 KFNGQKFGKRPIAVDWA 293
K +G+ R I V +A
Sbjct: 76 KLDGRNVDGREIMVQFA 92
>gi|409076284|gb|EKM76657.1| hypothetical protein AGABI1DRAFT_122567 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 755
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 204 ARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFV 263
A+ G SK++ K+I++N+PF+A +I+D+FS G + +V +P D+ ++GFAF+
Sbjct: 619 AKNKDGVNSKSRTTKVIVKNVPFEATKKDIRDLFSAHGHLKSVRLPKKFDS-RTRGFAFL 677
Query: 264 KFTCKRDAESAIQKFNGQKFGKRPIAVDWA 293
+F + +AE+A R + ++WA
Sbjct: 678 EFVSRHEAENAFNALRHTHLLGRHLVLEWA 707
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 126/335 (37%), Gaps = 69/335 (20%)
Query: 218 KLIIRNIPFKAKVNEIKDMFS----PVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAES 273
+L+I+N+P ++ F P G++ +V + + +D G S+ F FV + +A +
Sbjct: 3 RLMIKNLPSYVTPVRLRQHFEQQGCPAGILTDVKVAYKSD-GTSRRFGFVGYKTDEEAFA 61
Query: 274 AIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAET-- 331
A F+ I V I S A A NK LG ET
Sbjct: 62 ARNWFDKTFIDSTRIHVTL-----IDGSKDAPAPRPNK---------RPRLGPSPIETNP 107
Query: 332 ----ASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQ 387
S S KE LPS A+ EV R + + + LV
Sbjct: 108 LPIRESKSDKSMMKEKLPSQAEEFLEVMKPRTKKGPIWANEAQPKDIRPQEQLV------ 161
Query: 388 DSDKTVNESAKVSDVSKL-----NSSKSKPKSLKQTEGEDE------------------- 423
DK +A +SD + N+ ++ K+ +Q++ E E
Sbjct: 162 --DKAPVNTATLSDAEWMKQRMSNNVDNEGKAFEQSDEESENPDPKPSLPDPMDVGSPQD 219
Query: 424 -------LQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKT 476
+ +F+ NL F ++ + F + G++ L ++K+PKG F+ F T
Sbjct: 220 VARETILRTHRLFLRNLAFSCTETDLLELFRSHGDISQVHIPLDSLSKQPKGLAFVTFAT 279
Query: 477 VEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKK 511
AT+A A S +GR L +L A D++
Sbjct: 280 GADATSAYEALDKKS-----FQGRLLHILPAQDQQ 309
>gi|168034546|ref|XP_001769773.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678882|gb|EDQ65335.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 134
Score = 58.9 bits (141), Expect = 8e-06, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAV 290
N ++D FS G V V I + DTG S+GF FV FT +AE A+Q+ +G++ R I V
Sbjct: 60 NTLRDAFSSFGTVTEVKIILDRDTGRSRGFGFVNFTSPEEAEVALQEMDGRELAGRQIRV 119
Query: 291 DWAVPKNIYSSGGAA 305
D+A K + GG
Sbjct: 120 DYATDKARETRGGGG 134
>gi|392562711|gb|EIW55891.1| translation initiation factor 3 RNA-binding subunit [Trametes
versicolor FP-101664 SS1]
Length = 292
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + NI + N+++D+F G V VY+ + +TG KGFAFV F K A+ A++K
Sbjct: 212 LRVTNISEDTQENDLRDLFGVFGRVARVYVGRDRETGAGKGFAFVSFEEKSSAQKAMEKM 271
Query: 279 NGQKFGKRPIAVDWAVPK 296
+G+ + ++V W+ P+
Sbjct: 272 HGRGYDNLILSVQWSQPR 289
>gi|168038795|ref|XP_001771885.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676836|gb|EDQ63314.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 157
Score = 58.9 bits (141), Expect = 8e-06, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 47/80 (58%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL I + + N ++D F G V +V I + DTG S+GF FV FT ++AE A+Q+
Sbjct: 46 KLFIGGLAWATDENTLRDAFGSFGTVTDVKIILDRDTGRSRGFGFVNFTSPQEAEVALQE 105
Query: 278 FNGQKFGKRPIAVDWAVPKN 297
+G++ R I VD+A K+
Sbjct: 106 MDGRELAGRQIRVDYATDKS 125
>gi|448878226|gb|AGE46076.1| arginine/serine-rich splicing factor SCL30 transcript II [Zea mays]
Length = 259
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%)
Query: 211 GSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRD 270
G K L++RNIP + +++ F G V +VYIP + +G +GFAFV+F D
Sbjct: 32 GRKEGSGSLLVRNIPLSVRAEDLRVPFERFGPVRDVYIPKDYYSGEPRGFAFVEFVDPYD 91
Query: 271 AESAIQKFNGQKFGKRPIAV 290
A A N Q F R IAV
Sbjct: 92 ASEAQYHMNRQVFFGREIAV 111
>gi|194214277|ref|XP_001492007.2| PREDICTED: probable RNA-binding protein 19 [Equus caballus]
Length = 962
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A EI+++FS G + V +P T TG +GF FV F K+DA+ A
Sbjct: 835 KILVRNIPFQADSREIRELFSTFGELKTVRLPKKLTGTGSHRGFGFVDFLTKQDAKRAFN 894
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 895 ALCHSTHLYGRR-LVLEWA 912
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 152/372 (40%), Gaps = 71/372 (19%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q E SKT ++++N+P E+++ F G + V +P T A V+F
Sbjct: 581 QAAAERSKTV---ILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGVT------AIVEF 631
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGG----------------AAAGVQ 309
+A A + KF P+ ++WA P ++SS A A +
Sbjct: 632 LEPLEARKAFRHLAYSKFHHIPLYLEWA-PVGVFSSSAPQKKEPQDAPVDPAEKARAVPE 690
Query: 310 NKGDGNSDSGSDDDLGDDDAETA----SDDSNSSEKEDLPS------NADFDEEVDIARK 359
DG + G G D +A ++ E+E LP N +FD + +
Sbjct: 691 TVPDGKTPEGEKPTEGGADDSSAKMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEETLKG 750
Query: 360 VLNKLTST-----------TGSLPSLSDDSALVKGNKEQDSDKTVNE-SAKVSDVSKL-- 405
V +K+ + G+L LS V+ K + + K + + V D KL
Sbjct: 751 VFSKVGTVKSCSISRKKNKAGAL--LSMGFGFVEYRKPEQAQKALKQLQGHVVDSHKLEV 808
Query: 406 --NSSKSKP---KSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VPVL 459
+ +KP + K+ + + I + N+PF D+ E+++ FS FGE+ + +P
Sbjct: 809 RISERATKPALTSARKKQVPRKQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKK 868
Query: 460 HQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV--------LKALDKK 511
T +G GF+ F T + A A +A ++ L GR+L + L+AL +K
Sbjct: 869 LTGTGSHRGFGFVDFLTKQDAKRAFNALCHST----HLYGRRLVLEWADSEVTLQALRRK 924
Query: 512 LA-HDKEIDKSK 522
A H E K K
Sbjct: 925 TAEHFHEPPKKK 936
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 413 KSLKQTEGEDELQNT--IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTG 470
++L + E E++L ++ +F+ NLP+ EE++Q FS +G + + +TK+PKG
Sbjct: 389 RTLGENEEEEDLADSGRLFVRNLPYTSTEEELEQLFSRYGPLSELHYPIDGLTKKPKGFA 448
Query: 471 FLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHD 515
F+ F E A A + G +GR L VL + KK A +
Sbjct: 449 FVTFMFPEHAVRAYAEVD-----GQVFQGRMLHVLPSTIKKEASE 488
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+P+ + E++ +FS G + ++ P + T KGFAFV F A A +
Sbjct: 405 RLFVRNLPYTSTEEELEQLFSRYGPLSELHYPIDGLTKKPKGFAFVTFMFPEHAVRAYAE 464
Query: 278 FNGQKFGKRPIAV 290
+GQ F R + V
Sbjct: 465 VDGQVFQGRMLHV 477
>gi|17533393|ref|NP_495778.1| Protein EIF-3.G, isoform b [Caenorhabditis elegans]
gi|3024026|sp|Q19706.1|EIF3G_CAEEL RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Eukaryotic
translation initiation factor 3 subunit 4
gi|3876226|emb|CAA90354.1| Protein EIF-3.G, isoform b [Caenorhabditis elegans]
Length = 256
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 221 IRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNG 280
+ N+P + +E++D+F +G V ++I + TGL KGFAFV F + DA AI + N
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELND 239
Query: 281 QKFGKRPIAVDWAVPKN 297
+ + V+W P N
Sbjct: 240 IRMYHMVLKVEWTRPSN 256
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 34/61 (55%)
Query: 425 QNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV 484
+NT + NLP +++ +E++ F G V+ +VT PKG F+ F++ + A A+
Sbjct: 175 ENTCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAI 234
Query: 485 S 485
+
Sbjct: 235 A 235
>gi|396480635|ref|XP_003841040.1| similar to multiple RNA-binding domain containing protein 1
[Leptosphaeria maculans JN3]
gi|312217614|emb|CBX97561.1| similar to multiple RNA-binding domain containing protein 1
[Leptosphaeria maculans JN3]
Length = 831
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
K++I+N+PF+A E++ +F+P G + +V +P D+ S+GF F +FT KRDA +A+
Sbjct: 708 KILIKNLPFEASKKEVRALFTPYGQLRSVRVPKKFDSS-SRGFGFAEFTTKRDALNAMNA 766
Query: 278 F-NGQKFGKR 286
N G+R
Sbjct: 767 LKNTHLLGRR 776
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 148/340 (43%), Gaps = 56/340 (16%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
++++NIP +E++ +F G V +P TG+S A ++++ +A++A
Sbjct: 494 ILVKNIPHGVTSDELRKLFEEYGTVIRFLMP---PTGMS---AIIEYSNAAEAKTAFASL 547
Query: 279 NGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSG-SDDDLGDDDAETASDDSN 337
+ ++ I ++ A PK+++ G Q G + + S DL +D E + D+
Sbjct: 548 SYRRLKNSIIYLEKA-PKDLFKEGVVPNVPQPVSVGKAGTKLSATDLLEDAPEPETSDTA 606
Query: 338 S---------SEKEDLPS---------NADFDEEVDIARKVLN---------KLTSTTGS 370
+ + E L +A ++D R VL+ + T +
Sbjct: 607 TLFVRNLNFTTTSERLTEAFKPLSGFRSAKVKTKIDPKRGVLSMGFGFVEFTNAETATAA 666
Query: 371 LPSLSDDSALVKGNKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFI 430
L ++ D ++G+K Q + S K +D ++ + + +LK+ I I
Sbjct: 667 LRTM--DGHDLEGHKLQ-----IKASHKGADAAE---ERRREDALKKAAS-----TKILI 711
Query: 431 CNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTT 490
NLPF+ +EV+ F+ +G++ S V V + +G GF +F T A A++A K T
Sbjct: 712 KNLPFEASKKEVRALFTPYGQLRS-VRVPKKFDSSSRGFGFAEFTTKRDALNAMNALKNT 770
Query: 491 SGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRN 530
L GR+L + A + +KE++K + + N
Sbjct: 771 H-----LLGRRLVLAFAETESDDPEKELEKMQQKVGAQAN 805
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
+L +RN+ ++ +E+++ F+ G + V++P N G KGFAFV+F
Sbjct: 310 RLFLRNLHYEVTEDELREQFAKHGPLQEVHVPLNKADGKGKGFAFVQF 357
>gi|66475966|ref|XP_627799.1| 5x RRM. Mrd1p like, splicing related [Cryptosporidium parvum Iowa
II]
gi|32399047|emb|CAD98287.1| RNA-binding domain protein [Cryptosporidium parvum]
gi|46229208|gb|EAK90057.1| 5x RRM. Mrd1p like, splicing related [Cryptosporidium parvum Iowa
II]
Length = 806
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 203 WARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAF 262
+ QL G K KL+I+N+PF+A ++I +F+ VG V ++ IP +D G +KG+ F
Sbjct: 701 YGSQLTDIGVKNVSNKLLIKNLPFQATKSDIMSLFNSVGTVTSIRIPKKSD-GTNKGYCF 759
Query: 263 VKFTCKRDAESAIQKFNGQKFGKRPIAVDWA 293
++F K +A SA+++F R + ++ A
Sbjct: 760 IEFLGKLEAISALEQFQHTHLYGRHLIIEVA 790
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 157/383 (40%), Gaps = 75/383 (19%)
Query: 208 GGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGL-VWNVYI-----PHNTDTGLSKGFA 261
GG + ++II+N+P +KD S +G + +V I N + S+ F
Sbjct: 8 GGTKGEATSSRIIIKNLPSYLSEKRLKDHISSIGCNITDVKIVKKRSEKNPEVESSRKFG 67
Query: 262 FVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPK---------NIYSSGGAAAGVQNKG 312
FV F + DA+ ++ FNG I V +A P + YS G + +N
Sbjct: 68 FVGFYSEEDAKKVLEYFNGTFIDTCRINVQYAFPPGSDLLPRPWSKYSIGSSQYNRRNNI 127
Query: 313 DGNSDSGSDDDLG---DDDAE-------TASDDSNSS--EKEDLPSNADF-----DEEVD 355
N++ + + +DD++ + +SN S + DL N + D V
Sbjct: 128 KENTEVDEKEPITLSKEDDSKKENFKKWISQKNSNKSWLDSADLIDNNEINSVKNDSSVK 187
Query: 356 IARKVLNKLTSTTGSL-----------PSLSDDSALVKGNKEQDSD---KTVNESAKVSD 401
I+ +++ + ++ SD N +QDS+ +T NE+ D
Sbjct: 188 ISSEIVKPTKAGVSNVRKHIQFSESESEPESDSDPDPDQNSDQDSELKHETFNEN---DD 244
Query: 402 VSKLNSSKSKPKSLKQTEGED--ELQNTI----------------FICNLPFDLDNEEVK 443
S N S+S S T+ +D EL+ + + N+ + E++
Sbjct: 245 NSSTNVSESDLSSESNTDSDDNQELEEVVDIGEQIVTSPMETSRLMVVNISYSTTEEDLN 304
Query: 444 QRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLT 503
+ FS +GEV S + + KG GF++++ VE A +A+S + + L GR L
Sbjct: 305 KFFSKWGEVKSVNIIRSPESGVSKGYGFVQYEFVEHAVSALSQAHLS-----LLHGRVLR 359
Query: 504 VLKALDKKLAHDKEIDKSKNETN 526
V A +K K I S NE+N
Sbjct: 360 VSPAFNKPT---KTITDSFNESN 379
Score = 42.7 bits (99), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 59/110 (53%), Gaps = 11/110 (10%)
Query: 196 EIKGGTVWARQLGGEGSKT---QKWKLIIRNIPF-KAKVNEIKDMFSPVGLVWNVYIPHN 251
E++G ++ +L EG K K +II+++P + +++++ + SP G + + +
Sbjct: 467 EVEGSDIFTAKLKFEGVKNVERSKDTIIIKHLPSDQVTLSDLQKICSPFGRINRLCL--- 523
Query: 252 TDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSS 301
SK A V+F + AESA ++ ++F P+ ++WA P N++ S
Sbjct: 524 ---SPSKTIAIVQFLEESSAESAFKRLAFKRFKSVPLYIEWA-PVNLFVS 569
>gi|453231816|ref|NP_001263666.1| Protein EIF-3.G, isoform a [Caenorhabditis elegans]
gi|413001245|emb|CCO25605.1| Protein EIF-3.G, isoform a [Caenorhabditis elegans]
Length = 262
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 221 IRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNG 280
+ N+P + +E++D+F +G V ++I + TGL KGFAFV F + DA AI + N
Sbjct: 186 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELND 245
Query: 281 QKFGKRPIAVDWAVPKN 297
+ + V+W P N
Sbjct: 246 IRMYHMVLKVEWTRPSN 262
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 34/61 (55%)
Query: 425 QNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV 484
+NT + NLP +++ +E++ F G V+ +VT PKG F+ F++ + A A+
Sbjct: 181 ENTCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAI 240
Query: 485 S 485
+
Sbjct: 241 A 241
>gi|118487402|gb|ABK95529.1| unknown [Populus trichocarpa]
Length = 194
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 221 IRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNG 280
+ N+ + ++ ++F G V VY+ + TG+S+GF FV F K DAE AI K NG
Sbjct: 117 VTNLSEDTREPDLLELFRTFGQVSRVYVAIDQKTGVSRGFGFVNFVSKEDAERAINKLNG 176
Query: 281 QKFGKRPIAVDWAVPK 296
+ + V+WA P+
Sbjct: 177 YGYDNLILRVEWATPR 192
>gi|114051910|ref|NP_001039420.1| probable RNA-binding protein 19 [Bos taurus]
gi|88954099|gb|AAI14030.1| RNA binding motif protein 19 [Bos taurus]
Length = 920
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A EI+++FS G + V +P T TG +GF FV F K+DA+ A
Sbjct: 793 KILVRNIPFQADSREIRELFSTFGELKTVRLPKKLTGTGTHRGFGFVDFLTKQDAKRAFN 852
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 853 ALCHSTHLYGRR-LVLEWA 870
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 155/371 (41%), Gaps = 70/371 (18%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q E SKT ++++N+P E+++ FS G + V +P T A V+F
Sbjct: 540 QAAAERSKTV---ILVKNLPAGTLAAELQETFSRFGSLGRVLLPEGGIT------AIVEF 590
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAA------AGVQNKGDGNSDSG 319
+A A + KF P+ ++WA P ++SS A + G +
Sbjct: 591 LEPLEARKAFRHLAYSKFHHVPLYLEWA-PMGVFSSPIPQKEEPQDAPAEPAGTDRMEPE 649
Query: 320 SDDDL--GDDDAETASDDSNS-----------SEKEDLPS------NADFDEEVDIARKV 360
+D + G+ + A+ D+++ E+E LP N +FD + + V
Sbjct: 650 TDGETPEGEQPTDRAAHDASAKMEEEEEEEEEEEEESLPGCTLFIKNLNFDTTEETLKGV 709
Query: 361 LNKLTST-----------TGSLPSLSDDSALVKGNKEQDSDKTVNE-SAKVSDVSKL--- 405
+K+ + G+L LS V+ K + + K + + V D KL
Sbjct: 710 FSKVGAVKSCSISKKKNKAGAL--LSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEVR 767
Query: 406 -NSSKSKP---KSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VPVLH 460
+ +KP + K+ + + I + N+PF D+ E+++ FS FGE+ + +P
Sbjct: 768 ISERATKPALTSARKKQAPRKQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKL 827
Query: 461 QVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV--------LKALDKKL 512
T +G GF+ F T + A A +A ++ L GR+L + L AL +K
Sbjct: 828 TGTGTHRGFGFVDFLTKQDAKRAFNALCHST----HLYGRRLVLEWADSEVSLPALRRKT 883
Query: 513 A-HDKEIDKSK 522
A H E K K
Sbjct: 884 AEHFHEPPKKK 894
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 199 GGTVWARQLGGEGSKTQKW----KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDT 254
G W + GE + + +L +RN+P+ + +++ +FS G V ++ P ++ T
Sbjct: 341 GAKPWQGRTLGEHEEEEDLADSGRLFVRNLPYTSSEEDLEKLFSRYGPVSELHYPIDSLT 400
Query: 255 GLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAV 290
KGFAFV F A A + +GQ F R + V
Sbjct: 401 KKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHV 436
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 413 KSLKQTEGEDELQNT--IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTG 470
++L + E E++L ++ +F+ NLP+ E++++ FS +G V + +TK+PKG
Sbjct: 348 RTLGEHEEEEDLADSGRLFVRNLPYTSSEEDLEKLFSRYGPVSELHYPIDSLTKKPKGFA 407
Query: 471 FLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHD 515
F+ F E A A + G +GR L VL + KK A +
Sbjct: 408 FVTFMFPEHAVKAYAEVD-----GQVFQGRMLHVLPSTIKKEASE 447
>gi|440906208|gb|ELR56498.1| Putative RNA-binding protein 19 [Bos grunniens mutus]
Length = 947
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A EI+++FS G + V +P T TG +GF FV F K+DA+ A
Sbjct: 820 KILVRNIPFQADSREIRELFSTFGELKTVRLPKKLTGTGTHRGFGFVDFLTKQDAKRAFN 879
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 880 ALCHSTHLYGRR-LVLEWA 897
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 153/358 (42%), Gaps = 59/358 (16%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q E SKT ++++N+P E+++ FS G + V +P T A V+F
Sbjct: 582 QAAAERSKTV---ILVKNLPAGTLAAELQETFSRFGSLGRVLLPEGGIT------AIVEF 632
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSD-SGSDDDL 324
+A A + KF P+ ++WA P ++SS + D ++ +G+D
Sbjct: 633 LEPLEARKAFRHLAYSKFHHVPLYLEWA-PMGVFSS--PIPQKEEPQDAPAEPAGTDRME 689
Query: 325 GDDDAETASDDSNSSEKE-----DLPS------NADFDEEVDIARKVLNKLTST------ 367
+ D ET + + E+E LP N +FD + + V +K+ +
Sbjct: 690 PETDGETPEGEQPTEEEEEEEEESLPGCTLFIKNLNFDTTEETLKGVFSKVGAVKSCSIS 749
Query: 368 -----TGSLPSLSDDSALVKGNKEQDSDKTVNE-SAKVSDVSKL----NSSKSKP---KS 414
G+L LS V+ K + + K + + V D KL + +KP +
Sbjct: 750 KKKNKAGAL--LSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEVRISERATKPALTSA 807
Query: 415 LKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VPVLHQVTKRPKGTGFLK 473
K+ + + I + N+PF D+ E+++ FS FGE+ + +P T +G GF+
Sbjct: 808 RKKQAPRKQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKLTGTGTHRGFGFVD 867
Query: 474 FKTVEAATAAVSASKTTSGLGIFLKGRQLTV--------LKALDKKLA-HDKEIDKSK 522
F T + A A +A ++ L GR+L + L AL +K A H E K K
Sbjct: 868 FLTKQDAKRAFNALCHST----HLYGRRLVLEWADSEVSLPALRRKTAEHFHEPPKKK 921
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+P+ + +++ +FS G V ++ P ++ T KGFAFV F A A +
Sbjct: 406 RLFVRNLPYTSSEEDLEKLFSRYGPVSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAE 465
Query: 278 FNGQKFGKRPIAV 290
+GQ F R + V
Sbjct: 466 VDGQVFQGRMLHV 478
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 414 SLKQTEGEDELQNT--IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGF 471
+L + E E++L ++ +F+ NLP+ E++++ FS +G V + +TK+PKG F
Sbjct: 391 TLGEHEEEEDLADSGRLFVRNLPYTSSEEDLEKLFSRYGPVSELHYPIDSLTKKPKGFAF 450
Query: 472 LKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHD 515
+ F E A A + G +GR L VL + KK A +
Sbjct: 451 VTFMFPEHAVKAYAEVD-----GQVFQGRMLHVLPSTIKKEASE 489
>gi|224488073|sp|A8WLV5.2|EIF3G_CAEBR RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Eukaryotic
translation initiation factor 3 subunit 4
Length = 261
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 221 IRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNG 280
+ N+P + +E++D+F +G V ++I + TGL KGFAFV F + DA AI + N
Sbjct: 185 VTNLPQEMNEDELRDVFGRIGRVIRIFIARDKITGLPKGFAFVTFESRDDAARAIAELND 244
Query: 281 QKFGKRPIAVDWAVPKN 297
+ + V+W P N
Sbjct: 245 IRMYHMVLKVEWTRPSN 261
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%)
Query: 416 KQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFK 475
+Q E +NT + NLP +++ +E++ F G V+ ++T PKG F+ F+
Sbjct: 171 RQMERNRSDENTCRVTNLPQEMNEDELRDVFGRIGRVIRIFIARDKITGLPKGFAFVTFE 230
Query: 476 TVEAATAAVS 485
+ + A A++
Sbjct: 231 SRDDAARAIA 240
>gi|259648115|dbj|BAI40365.1| TIA-1 homologue [Bombyx mori]
Length = 402
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 16/143 (11%)
Query: 168 EGCKM------DASAVL-YTTVKSACASVALLHQ-----KEIKGGTVWARQLGGEG--SK 213
+GCK+ D A L +T +A ++A +++ KE+K WA G +
Sbjct: 35 KGCKIIREPGNDPYAFLEFTCHTAAVTALAAMNKRVVLDKEMK--VNWATSPGNQPKTDT 92
Query: 214 TQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAES 273
+ + + ++ + + N +++ F+P G + N I + T SKG+AFV F K DAE+
Sbjct: 93 SNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEA 152
Query: 274 AIQKFNGQKFGKRPIAVDWAVPK 296
AIQ NGQ G R I +W+ K
Sbjct: 153 AIQAMNGQWLGSRSIRTNWSTRK 175
>gi|307111065|gb|EFN59300.1| hypothetical protein CHLNCDRAFT_7238, partial [Chlorella
variabilis]
Length = 556
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 208 GGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTC 267
GG K+++RN+ F+A +I +F+P G V + +P D G +GFAFV F
Sbjct: 459 GGAAVLPDTCKVVVRNVAFEATRKDIMGLFTPFGHVNSCRLPRKFD-GTHRGFAFVDFAT 517
Query: 268 KRDAESAIQKFNGQKFGKRPIAVDWA 293
K++A +A++ G R + ++WA
Sbjct: 518 KQEARNAMEAVQGAHLYGRRLVLEWA 543
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 47/83 (56%), Gaps = 7/83 (8%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L+++N+PF A + E++ +F +G + + +P ++ A V++ +DA A +
Sbjct: 217 LVVKNLPFTASLEELEALFGTIGALGRLVLPP------TRTLALVEYLEAQDARRAFKAL 270
Query: 279 NGQKFGKRPIAVDWAVPKNIYSS 301
+++ P+ ++WA P+ I+S+
Sbjct: 271 AYKRYQHVPLYLEWA-PRTIFST 292
Score = 42.7 bits (99), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+P+ A E++ +F G V V++ + + SKGFA V+F +DA A +
Sbjct: 19 RLFVRNLPYSATEAELQALFEGYGDVSEVHLVLDRASKKSKGFALVQFADPQDAVKAHAE 78
Query: 278 FNGQKFGKRPIAV 290
+ F R I +
Sbjct: 79 LDASIFQGRLIHI 91
>gi|224109462|ref|XP_002315204.1| predicted protein [Populus trichocarpa]
gi|222864244|gb|EEF01375.1| predicted protein [Populus trichocarpa]
Length = 294
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 221 IRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNG 280
+ N+ + ++ ++F G V VY+ + TG+S+GF FV F K DAE AI K NG
Sbjct: 217 VTNLSEDTREPDLLELFRTFGQVSRVYVAIDQKTGVSRGFGFVNFVSKEDAERAINKLNG 276
Query: 281 QKFGKRPIAVDWAVPK 296
+ + V+WA P+
Sbjct: 277 YGYDNLILRVEWATPR 292
>gi|225434808|ref|XP_002282278.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G-B
[Vitis vinifera]
Length = 296
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 221 IRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNG 280
+ N+ + ++ ++F G V VY+ + TG+S+GF FV F K DAE AI K NG
Sbjct: 219 VTNLSEDTREPDLHELFRTFGPVSRVYVAVDQKTGMSRGFGFVNFVNKEDAERAINKLNG 278
Query: 281 QKFGKRPIAVDWAVPKN 297
+ + V+WA P++
Sbjct: 279 YGYDNLILRVEWATPRS 295
>gi|442749963|gb|JAA67141.1| Putative rna-binding protein rrm superfamily [Ixodes ricinus]
Length = 863
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 49/79 (62%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A E++++FS G + ++ +P TG +GFAFV F K DA+ A Q
Sbjct: 738 KILVRNIPFEATKKELQELFSVFGTLRDIRLPKKMAGTGRHRGFAFVDFLTKNDAKRAFQ 797
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 798 ALCQSTHLYGRR-LVLEWA 815
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
++++N+P K +EI+D F+ G + V +P G+ A V+F +A +A ++
Sbjct: 509 ILVKNLPAKTHPDEIRDAFAKFGTLSRVVLP---PWGVC---ALVEFQEPSEARTAFRRL 562
Query: 279 NGQKFGKRPIAVDWA 293
KF P+ ++WA
Sbjct: 563 AYSKFKHVPLYLEWA 577
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
IF+ NL + + ++++ F FG + + ++T++PKG F+ F E A A S
Sbjct: 326 IFVRNLSYTVTEDDIEALFKKFGPISEVHLSIDKITRKPKGFAFVSFMFPEHAIKAFSEL 385
Query: 488 KTTSGLGIFLKGRQLTVLKA 507
G L+GR L ++ A
Sbjct: 386 D-----GKLLQGRLLHLIPA 400
>gi|357148860|ref|XP_003574918.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 286
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 66/125 (52%), Gaps = 8/125 (6%)
Query: 177 VLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQK--------WKLIIRNIPFKA 228
V +T++ A ++ + ++ +I G + + GS+ ++ ++ + N+P++A
Sbjct: 154 VTMSTIEEADKAIEMFNRYDISGRLLNVNRAAQRGSRVERPPRQFASAFRAYVGNLPWQA 213
Query: 229 KVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPI 288
+ + + +FS G V N + ++ +TG S+GF FV K + + AI +GQ+ RP+
Sbjct: 214 EDSRLVQLFSEHGEVLNATVVYDRETGRSRGFGFVTMASKEELDDAISALDGQELDGRPL 273
Query: 289 AVDWA 293
V+ A
Sbjct: 274 RVNVA 278
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSK 58
++ + S + RGFG+V + +E+A++A+EM N + GR + V A R S +R +
Sbjct: 139 VIYNRESGQSRGFGFVTMSTIEEADKAIEMFNRYDISGRLLNVNRAAQRGSRVERPPR 196
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
K+ + N+P+ + +F G+V + +N ++G S+GF FV + +A+ AI+
Sbjct: 109 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIEM 168
Query: 278 FNGQKFGKRPIAVDWA 293
FN R + V+ A
Sbjct: 169 FNRYDISGRLLNVNRA 184
>gi|118488717|gb|ABK96169.1| unknown [Populus trichocarpa]
Length = 241
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
K+ I I F+ N +K+ F G V I + DTG S+GF FV +T +A SAIQ
Sbjct: 41 KIFIGGISFQTDDNGLKEAFDKYGNVVEARIIMDRDTGRSRGFGFVTYTSSEEASSAIQA 100
Query: 278 FNGQKFGKRPIAVDWAVPK 296
+GQ R + V++A +
Sbjct: 101 MDGQDLHGRRVRVNYATER 119
>gi|159163840|pdb|2CPH|A Chain A, Solution Structure Of The C-Terminal Rna Recognition Motif
Of Hypothetical Rna-Binding Protein Rbm19
Length = 107
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A EI+++FS G + V +P T TG +GF FV F K+DA+ A
Sbjct: 17 KILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFN 76
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 77 ALCHSTHLYGRR-LVLEWA 94
>gi|324515203|gb|ADY46121.1| Eukaryotic translation initiation factor 3 subunit G [Ascaris suum]
Length = 285
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 221 IRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNG 280
+ N+P + E++ +F+ +G V V+I + T KGFAFV + + AE AIQK NG
Sbjct: 209 VTNLPEECDEMELRGLFTQIGQVSRVFIAKDKHTNKPKGFAFVTYEHREHAEMAIQKLNG 268
Query: 281 QKFGKRPIAVDWAVPKN 297
K + V+W P N
Sbjct: 269 YKLDHLVLKVEWTRPNN 285
>gi|268530192|ref|XP_002630222.1| C. briggsae CBR-EIF-3.G.1 protein [Caenorhabditis briggsae]
gi|268570827|ref|XP_002648625.1| C. briggsae CBR-EIF-3.G.2 protein [Caenorhabditis briggsae]
Length = 255
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 221 IRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNG 280
+ N+P + +E++D+F +G V ++I + TGL KGFAFV F + DA AI + N
Sbjct: 179 VTNLPQEMNEDELRDVFGRIGRVIRIFIARDKITGLPKGFAFVTFESRDDAARAIAELND 238
Query: 281 QKFGKRPIAVDWAVPKN 297
+ + V+W P N
Sbjct: 239 IRMYHMVLKVEWTRPSN 255
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%)
Query: 416 KQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFK 475
+Q E +NT + NLP +++ +E++ F G V+ ++T PKG F+ F+
Sbjct: 165 RQMERNRSDENTCRVTNLPQEMNEDELRDVFGRIGRVIRIFIARDKITGLPKGFAFVTFE 224
Query: 476 TVEAATAAVS 485
+ + A A++
Sbjct: 225 SRDDAARAIA 234
>gi|414887732|tpg|DAA63746.1| TPA: hypothetical protein ZEAMMB73_977373 [Zea mays]
Length = 267
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 200 GTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKG 259
GT A Q GE S + KL + N+PF ++ +F G V V + ++ TG S+G
Sbjct: 62 GTEGAEQQDGEFS--EDLKLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRG 119
Query: 260 FAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVP 295
F FV + +A +A+++FNG F RP+ V+ P
Sbjct: 120 FGFVTMSSAEEAGAAVEQFNGYTFQGRPLRVNCGPP 155
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 407 SSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRP 466
SS+ + +Q +GE +F+ NLPF +D+ ++ F G V V ++T R
Sbjct: 58 SSEYGTEGAEQQDGEFSEDLKLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRS 117
Query: 467 KGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV 504
+G GF+ + E A AAV G +GR L V
Sbjct: 118 RGFGFVTMSSAEEAGAAVEQFN-----GYTFQGRPLRV 150
>gi|406700097|gb|EKD03282.1| hypothetical protein A1Q2_02392 [Trichosporon asahii var. asahii
CBS 8904]
Length = 387
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 81/194 (41%), Gaps = 25/194 (12%)
Query: 117 KQRVARTVIIGGL-LNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDAS 175
+Q TV +GGL N D A S G V S L ++ G
Sbjct: 199 EQEATNTVFVGGLSWNIDNDWLASEFA-SCGEVVSARIVLDRDTQRSRGFGY-------- 249
Query: 176 AVLYTTVKSACASVALLHQKEIKGGTV---WARQLGGEGSKTQKW----------KLIIR 222
V + V SA ++ KE+ G V +A + K K L I
Sbjct: 250 -VEFADVDSAIKAIEF-EGKELDGRAVRVNFANARKPDADKRAKVFNDKRSPPADTLWIG 307
Query: 223 NIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK 282
++PF + I + F G V +V +P + +TG +KGF +V F A +A++ NG +
Sbjct: 308 SLPFDTTEDHIYETFGEYGDVQSVRLPTDRETGAAKGFGYVTFGDVAQATAALEALNGSE 367
Query: 283 FGKRPIAVDWAVPK 296
FG R I +D+A PK
Sbjct: 368 FGSRRIRIDFAPPK 381
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 6/99 (6%)
Query: 418 TEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTV 477
+EGE E NT+F+ L +++DN+ + F++ GEVVS VL + T+R +G G+++F V
Sbjct: 196 SEGEQEATNTVFVGGLSWNIDNDWLASEFASCGEVVSARIVLDRDTQRSRGFGYVEFADV 255
Query: 478 EAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDK 516
++A A+ G L GR + V A +K DK
Sbjct: 256 DSAIKAIEFE------GKELDGRAVRVNFANARKPDADK 288
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
+T++I +LPFD + + + F +G+V S + T KG G++ F V ATAA+
Sbjct: 302 DTLWIGSLPFDTTEDHIYETFGEYGDVQSVRLPTDRETGAAKGFGYVTFGDVAQATAALE 361
Query: 486 A 486
A
Sbjct: 362 A 362
>gi|47217530|emb|CAG02457.1| unnamed protein product [Tetraodon nigroviridis]
Length = 418
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 77/168 (45%), Gaps = 18/168 (10%)
Query: 151 VTYPLPKEELEQHGLAQEGCKM--------DASAVLYTTVKSACASVALLHQKEIKGGTV 202
VT PL + Q G + CKM V + + A AS+A ++ ++I G V
Sbjct: 23 VTEPLILQVFTQIGPCKS-CKMIVDTAGNDPYCFVEFYEHRHAAASLAAMNGRKIMGKEV 81
Query: 203 ---WARQLGGEGSKTQK-WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSK 258
WA + T + + + ++ + +++K F P G + + + + TG SK
Sbjct: 82 KVNWATTPTSQKKDTSNHFHVFVGDLSPEITTDDVKAAFGPFGRISDARVVKDMATGKSK 141
Query: 259 GFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAV-----PKNIYSS 301
G+ FV F K DAE+AIQ+ GQ G R I +WA PK Y S
Sbjct: 142 GYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKTTYES 189
>gi|410922589|ref|XP_003974765.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Takifugu rubripes]
Length = 386
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 79/168 (47%), Gaps = 18/168 (10%)
Query: 151 VTYPLPKEELEQHGLAQEGCKM--DASA------VLYTTVKSACASVALLHQKEIKGGTV 202
VT PL + Q G + CKM D + V + + A AS+A ++ ++I G V
Sbjct: 18 VTEPLILQVFTQIGPCKS-CKMIVDTAGNDPYCFVEFYEHRHAAASLAAMNGRKIMGKEV 76
Query: 203 ---WARQLGGEGSKTQK-WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSK 258
WA + T + + + ++ + +++K F P G + + + + TG SK
Sbjct: 77 KVNWATTPTSQKKDTSNHFHVFVGDLSPEITTDDVKAAFGPFGRISDARVVKDMATGKSK 136
Query: 259 GFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAV-----PKNIYSS 301
G+ FV F K DAE+AIQ+ GQ G R I +WA PK Y S
Sbjct: 137 GYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKTTYES 184
>gi|168041276|ref|XP_001773118.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675665|gb|EDQ62158.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 203
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 75/138 (54%), Gaps = 13/138 (9%)
Query: 167 QEGCKMDASAVLYTTVKSACASVALLH-QKEIKGGT--VWARQLGGEGSK--TQKWKLII 221
Q+GC V Y+TV+ A ++ LH QK + GG V R GE + + KL +
Sbjct: 56 QQGC----CFVKYSTVEEAERAIRALHNQKTLPGGVSPVQVRYADGERERLGAVEHKLFV 111
Query: 222 RNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQ 281
++ +A EI+++F P G V +VYI + + S+G AF+K++ + A++AI NG
Sbjct: 112 GSLNKQASEKEIEELFIPYGRVDDVYIMRD-EQKQSRGCAFIKYSQRDHAQAAINALNGV 170
Query: 282 KFGK---RPIAVDWAVPK 296
+ +P+AV +A PK
Sbjct: 171 HIMQGCDQPLAVRFADPK 188
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL + ++P +E++ MF+ G V V I + TG +G FVK++ +AE AI+
Sbjct: 17 KLFVGSVPRTITEDEVRPMFAEHGNVLEVAIIKDKRTGNQQGCCFVKYSTVEEAERAIRA 76
Query: 278 FNGQKF---GKRPIAVDWA 293
+ QK G P+ V +A
Sbjct: 77 LHNQKTLPGGVSPVQVRYA 95
>gi|402219166|gb|EJT99240.1| eukaryotic translation initiation factor 3 [Dacryopinax sp. DJM-731
SS1]
Length = 297
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 11/148 (7%)
Query: 157 KEELEQHGLAQEGCK--MDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGE---- 210
KE LE GL G + MD + T A+ K + GGE
Sbjct: 147 KETLEPMGLGAPGAETPMDGAD---TPQNEPAAAAPTTGGKYVPPSMRAGASRGGESMYK 203
Query: 211 --GSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCK 268
GS+ L + N+ A+ ++++D+F G V V+I + +TG+ KG+AFV F +
Sbjct: 204 AGGSREDMPTLRVTNLSEDAEEDDLRDLFQRFGRVARVFIGRDRETGVGKGYAFVSFEDR 263
Query: 269 RDAESAIQKFNGQKFGKRPIAVDWAVPK 296
A+ A+ + +G + ++V W+VP+
Sbjct: 264 DSAQRALDRVHGMGYANLILSVQWSVPR 291
>gi|340382975|ref|XP_003389993.1| PREDICTED: probable RNA-binding protein 19-like [Amphimedon
queenslandica]
Length = 866
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 135/307 (43%), Gaps = 50/307 (16%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
++++N+PF E+ ++F+P G + V +P G+S A V+++ +A+ A +K
Sbjct: 546 ILVKNLPFGTSTKELTELFAPFGSLSRVILP---PAGIS---ALVEYSSSSNAKVAFKKL 599
Query: 279 NGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDDSNS 338
+ +F P+ ++WA P + SG + V++ G S + + +DD S
Sbjct: 600 SYCEFKHLPLYLEWA-PFGVM-SGEPSQPVKDTGKAEESSSI---FVKNLNFSTTDDGLS 654
Query: 339 SEKEDLPSNADFDEEVD--IARKVLNKLTSTTGSLPSL---------SDDSALVKGNKEQ 387
S F E V ++ KV K T G SL S +A +K KE
Sbjct: 655 SH---------FKERVGGVVSAKVSKKYTPKAGGGASLSMGFGFVTFSSKTAALKALKEL 705
Query: 388 DSD---------KTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLD 438
S + + + VSD + S K KSL +G +N I I N+PF+
Sbjct: 706 QSSLLDGHKLELQLSHSAPSVSDAASATSHKVT-KSL-MPKGP---KNKILIRNVPFEAS 760
Query: 439 NEEVKQRFSAFGEVVSF-VPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFL 497
+E+ Q S FG++ + +P +G F+++ T E A +A + ++ L
Sbjct: 761 RKELSQLLSTFGKIKNLRLPKKQNEPNSHRGFCFVEYSTTEDARSAFESLADST----HL 816
Query: 498 KGRQLTV 504
GR+L +
Sbjct: 817 YGRRLVL 823
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 213 KTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLS-KGFAFVKFTCKRDA 271
K K K++IRN+PF+A E+ + S G + N+ +P + S +GF FV+++ DA
Sbjct: 744 KGPKNKILIRNVPFEASRKELSQLLSTFGKIKNLRLPKKQNEPNSHRGFCFVEYSTTEDA 803
Query: 272 ESAIQKF--NGQKFGKRPIAVDWA 293
SA + + +G+R + ++WA
Sbjct: 804 RSAFESLADSTHLYGRR-LVLEWA 826
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 10/103 (9%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
++I++N+P KA E+K+ FS G + +V + + T +G + FAFV ++ A+ +I+
Sbjct: 4 RVIVKNLPSKATSKELKEHFSKCGQITDVKLMY-TRSGTFRRFAFVGYSDSFSAQESIKY 62
Query: 278 FNGQKFGKRPIAV-------DWAVPK--NIYSSGGAAAGVQNK 311
FN G I V D ++P+ + YS+G + + K
Sbjct: 63 FNNTYIGTSKIQVIEAKSFGDSSIPRPWSRYSTGSSTNQIYEK 105
>gi|47225344|emb|CAG09844.1| unnamed protein product [Tetraodon nigroviridis]
Length = 570
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 48/75 (64%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VGLV + + ++ +TG KG+ F ++ + A SA++
Sbjct: 28 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 87
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 88 NGREFSGRALRVDNA 102
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV 484
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 27 SVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 84
>gi|329669018|gb|AEB96397.1| cleavage stimulation factor subunit 2 [Angiostrongylus cantonensis]
Length = 97
Score = 58.5 bits (140), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 46/78 (58%)
Query: 216 KWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAI 275
++ + + NIP++ + I + FS G V NV I ++ +TG KGF F +F+ + A++A+
Sbjct: 17 RYSVYVGNIPYQTTEDAIGNHFSQAGRVTNVRIVYDRETGRPKGFGFCEFSDEAGAQNAV 76
Query: 276 QKFNGQKFGKRPIAVDWA 293
NG F R + V+WA
Sbjct: 77 NTLNGTDFNGRSLRVNWA 94
>gi|26354232|dbj|BAC40744.1| unnamed protein product [Mus musculus]
Length = 305
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 74/164 (45%), Gaps = 11/164 (6%)
Query: 136 EEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVLYTTVKSACASVALLHQK 195
EE+ L SIG V S L ++++ H L V Y T K A +++ L+
Sbjct: 13 EELRSLFSSIGEVESAK--LIRDKVAGHSLGY-------GFVNYVTAKDAERAISTLNGL 63
Query: 196 EIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTG 255
++ T+ + L I +P +++DMFS G + N + + TG
Sbjct: 64 RLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 123
Query: 256 LSKGFAFVKFTCKRDAESAIQKFNGQK--FGKRPIAVDWAVPKN 297
LS+G AF++F + +AE AI FNG K PI V +A N
Sbjct: 124 LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPN 167
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 112/301 (37%), Gaps = 41/301 (13%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
++ K + G+G+V + +DA RA+ NG + + I V +A R S E +
Sbjct: 30 LIRDKVAGHSLGYGFVNYVTAKDAERAISTLNGLRLQSKTIKVSYA--RPSSEVIKDA-- 85
Query: 61 QEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQRV 120
+ + +TM KD E S+ G+ + R L D Q +
Sbjct: 86 -NLYISGLPRTMTQKD-----VEDMFSRF---GRIINSRV-------LVD-----QTTGL 124
Query: 121 ARTVIIGGLLNADMAEEV------HRLAGSIGTVCSVTYPLPKEELEQHGLAQ---EGCK 171
+R V AEE H+ GS + P + L+Q +
Sbjct: 125 SRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNMALLSQLYHSPAR 184
Query: 172 MDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVN 231
V + + + + + H I G V G+ + W + I N+ A
Sbjct: 185 RFGGPVHHQAQRFRFSPMGVDHMSGISGVNV-------PGNASSGWCIFIYNLGQDADEG 237
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
+ MF P G V NV + + +T KGF FV T +A AI NG + G + + V
Sbjct: 238 ILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVS 297
Query: 292 W 292
+
Sbjct: 298 F 298
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
LI+ +P E++ +FS +G V + + + G S G+ FV + +DAE AI
Sbjct: 1 LIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTL 60
Query: 279 NGQKFGKRPIAVDWAVPK-------NIYSSG 302
NG + + I V +A P N+Y SG
Sbjct: 61 NGLRLQSKTIKVSYARPSSEVIKDANLYISG 91
>gi|59802519|gb|AAX07503.1| unknown [Gemmata sp. Wa1-1]
Length = 122
Score = 58.5 bits (140), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 49/81 (60%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL + N+ + ++++DMF+P G V + + + DTG SKGF FV+ ++A++AI
Sbjct: 41 KLYVGNLSWGVTDSQLQDMFTPYGSVVSAQVIMDRDTGRSKGFGFVEMGTDQEAQAAITG 100
Query: 278 FNGQKFGKRPIAVDWAVPKNI 298
+GQ RP+ V+ A PK +
Sbjct: 101 MHGQVIEGRPLTVNEARPKKL 121
Score = 46.6 bits (109), Expect = 0.044, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 417 QTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKT 476
+ GE + +++ NL + + + +++ F+ +G VVS ++ + T R KG GF++ T
Sbjct: 31 RAAGEFVVGKKLYVGNLSWGVTDSQLQDMFTPYGSVVSAQVIMDRDTGRSKGFGFVEMGT 90
Query: 477 VEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKL 512
+ A AA++ G ++GR LTV +A KKL
Sbjct: 91 DQEAQAAITGMH-----GQVIEGRPLTVNEARPKKL 121
>gi|402587661|gb|EJW81596.1| nucleolysin TIAR [Wuchereria bancrofti]
Length = 440
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 105/241 (43%), Gaps = 31/241 (12%)
Query: 122 RTVIIGGLLNADMAEEVHRLAGSIGTVCSVTY-------PLPKEELEQHGLAQEGCKMDA 174
RTV +G L + + + L G IG V P E H
Sbjct: 93 RTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGTNDPYAFVEFADH----------- 141
Query: 175 SAVLYTTVKSACA-SVALLHQKEIKGGTVWARQLGGEG--SKTQKWKLIIRNIPFKAKVN 231
YT ++ A + +L +KE+K WA + G + ++ + + + ++ +
Sbjct: 142 ----YTAAQALQAMNKRVLLEKEMK--VNWATEPGSQAKVDTSKHFHVFVGDLSPEVDNK 195
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
+KD F+P G V + + + T SKG+ FV + + +AE AI++ NGQ G+R I +
Sbjct: 196 ALKDAFAPFGEVSDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTN 255
Query: 292 WAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDDSNSSEKEDLPSNADFD 351
WA K + GA G + + N D + D+ + + ++++ EDL A FD
Sbjct: 256 WATRKP--TGTGAGDGQYGRSELNYDDVYNQTGPDNTSVYVGNVNSNANDEDL--RAAFD 311
Query: 352 E 352
+
Sbjct: 312 K 312
>gi|449478880|ref|XP_004155443.1| PREDICTED: uncharacterized protein LOC101223695 [Cucumis sativus]
Length = 283
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%)
Query: 214 TQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAES 273
T + L++ NI F+ +++ +F G V +++IP + TG S+GFAFV++ +A+
Sbjct: 13 TDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
Query: 274 AIQKFNGQKFGKRPIAVDWA 293
A+++ +G R I V +A
Sbjct: 73 AVERLDGTMVDGREITVQFA 92
>gi|410080926|ref|XP_003958043.1| hypothetical protein KAFR_0F03120 [Kazachstania africana CBS 2517]
gi|372464630|emb|CCF58908.1| hypothetical protein KAFR_0F03120 [Kazachstania africana CBS 2517]
Length = 412
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 14/126 (11%)
Query: 185 ACASVALLHQKEIKGGTV-----WARQLGGEGSKTQKW---------KLIIRNIPFKAKV 230
A +V +H KEI G + ++ G + +K+ L + N+ F A
Sbjct: 219 AEKAVKEMHGKEIDGREINCDMSTSKPAAGNNDRAKKFGDVPSEPSETLFLGNLSFNADR 278
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAV 290
+ I +MFS G + +V IP + +T KGF +V++T DA+ A+ G+ RP+ +
Sbjct: 279 DNISEMFSKFGEIVSVRIPTHPETEQPKGFGYVQYTNVEDAKKALDALQGEYIDNRPVRL 338
Query: 291 DWAVPK 296
D++ P+
Sbjct: 339 DFSTPR 344
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%)
Query: 423 ELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATA 482
E T+F+ NL F+ D + + + FS FGE+VS H T++PKG G++++ VE A
Sbjct: 262 EPSETLFLGNLSFNADRDNISEMFSKFGEIVSVRIPTHPETEQPKGFGYVQYTNVEDAKK 321
Query: 483 AVSA 486
A+ A
Sbjct: 322 ALDA 325
>gi|38141765|dbj|BAD00701.1| TIA-1 homologue [Bombyx mori]
Length = 388
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 16/143 (11%)
Query: 168 EGCKM------DASAVL-YTTVKSACASVALLHQ-----KEIKGGTVWARQLGGEG--SK 213
+GCK+ D A L +T +A ++A +++ KE+K WA G +
Sbjct: 35 KGCKIIREPGNDPYAFLEFTCHTAAVTALAAMNKRVVLDKEMK--VNWATSPGNQPKTDT 92
Query: 214 TQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAES 273
+ + + ++ + + N +++ F+P G + N I + T SKG+AFV F K DAE+
Sbjct: 93 SNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEA 152
Query: 274 AIQKFNGQKFGKRPIAVDWAVPK 296
AIQ NGQ G R I +W+ K
Sbjct: 153 AIQAMNGQWLGSRSIRTNWSTRK 175
>gi|226496531|ref|NP_001152123.1| splicing factor, arginine/serine-rich 2 [Zea mays]
gi|195652939|gb|ACG45937.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 161
Score = 58.5 bits (140), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 49/85 (57%)
Query: 209 GEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCK 268
G+ + + L++ N+ F+ +++ +F G V ++YIP + TG +GFAFV++ +
Sbjct: 8 GQPENRESFSLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNYE 67
Query: 269 RDAESAIQKFNGQKFGKRPIAVDWA 293
+A+ AI +G +F R + V +A
Sbjct: 68 DEAQDAIDGLDGMRFDGRALMVQFA 92
>gi|255084425|ref|XP_002508787.1| predicted protein [Micromonas sp. RCC299]
gi|226524064|gb|ACO70045.1| predicted protein [Micromonas sp. RCC299]
Length = 248
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 48/77 (62%)
Query: 217 WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
+ L + N+ + + ++K++F G + +VY+P + T S+GFAFV+F + AE AI+
Sbjct: 31 YSLKLDNLDYSVTLEQLKELFGKHGEIGDVYMPRDYYTKRSRGFAFVRFKDRTAAEDAIK 90
Query: 277 KFNGQKFGKRPIAVDWA 293
+F+ ++ RPIA +A
Sbjct: 91 EFDQKELNGRPIACRFA 107
>gi|452848411|gb|EME50343.1| hypothetical protein DOTSEDRAFT_69017 [Dothistroma septosporum
NZE10]
Length = 516
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + NI F A + + ++F G + V +P + +TG KGF +V+F+ +A+SA++
Sbjct: 363 LFVGNISFDATQDMVTEVFQEYGSINAVRLPTDRETGAPKGFGYVEFSSIEEAKSAMENL 422
Query: 279 NGQKFGKRPIAVDWAVPK 296
G RPI +D++ PK
Sbjct: 423 TGVDIAGRPIRLDYSTPK 440
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 67/132 (50%), Gaps = 9/132 (6%)
Query: 403 SKLNSSKSKPK-SLKQTEGEDELQN-TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLH 460
SK ++++P+ + K+T+ ED +F+ NL +++D E + + F FG + + +
Sbjct: 228 SKKRKAEAEPEETSKKTKTEDPAATGNLFVGNLSWNVDEEWLTREFEEFGAIKAVRVITD 287
Query: 461 QVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDK 520
+ + R KG G+++F++ + A A+ A G L R+L V + +D + +
Sbjct: 288 RDSGRSKGYGYVEFESADDAAKALEARH-----GYTLDNRELRVDLGTPRAQRNDGQTPQ 342
Query: 521 SKNETNDHRNLY 532
+ +ND + Y
Sbjct: 343 QR--SNDRQKQY 352
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
++T + S +G+GYV+F +DA +A+E ++G ++ R++ V RA QR T
Sbjct: 284 VITDRDSGRSKGYGYVEFESADDAAKALEARHGYTLDNRELRVDLGTPRA---QRNDGQT 340
Query: 61 QEVQAEDIEK 70
+ ++ D +K
Sbjct: 341 PQQRSNDRQK 350
>gi|384493509|gb|EIE84000.1| hypothetical protein RO3G_08705 [Rhizopus delemar RA 99-880]
Length = 624
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 156/388 (40%), Gaps = 65/388 (16%)
Query: 213 KTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAE 272
KT + I+N+ + D FS G + + I + ++G SKG+ FV + + A+
Sbjct: 128 KTGSGNVFIKNLDPSIDNKALHDTFSAFGNILSCKIALD-ESGNSKGYGFVHYETEEAAD 186
Query: 273 SAIQKFNGQKFGKRPIAVDWAVPK---------------NIYSSGGAAAGVQNKGDGNSD 317
+AI+ NG + + V VPK N+Y V+N + D
Sbjct: 187 NAIKHVNGMLLNDKKVYVGRHVPKKERQAKIEQFRAKFTNVY--------VKNLDESVKD 238
Query: 318 SGSDDDLGD----DDAETASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPS 373
++ L A +DD S+ +F+ D A+K ++ L T
Sbjct: 239 EEFNEMLAKFGPITSALVQTDDEGKSKGFGF---VNFENHED-AQKAVDALNETEHKGKI 294
Query: 374 LSDDSALVKGNKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNL 433
L A K +E++ K E AK+ ++K ++I NL
Sbjct: 295 LYVARAQKKTEREEELRKQY-EQAKLEKLAKYQGV------------------NLYIKNL 335
Query: 434 PFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGL 493
D+D+E+++Q FS +G V++ V+ KG GF+ F + + AT AV+
Sbjct: 336 DDDIDDEKLRQEFSVYG-VITSAKVMCDEKDTSKGFGFVCFSSPDEATKAVTE------- 387
Query: 494 GIFLKGRQLTVLKALDKKLAHDKEIDKSKNETN-DHRNLYLAKEGLILEGTPA-AEGVSD 551
+ GR + K + LA KEI +S+ E RN ++G+ + G P G
Sbjct: 388 ---MNGRMIGS-KPIYVALAQRKEIRRSQLEAQMAQRNQMRMQQGMPMPGAPGYMPGAPM 443
Query: 552 DDMSKRQMLHEKKMTKLQSPNFHVSRTR 579
Q + + + + +PN + R R
Sbjct: 444 FYAPPGQFMPQGQRPAVFAPNGMMPRPR 471
Score = 38.9 bits (89), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 212 SKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDA 271
+K Q L I+N+ +++ FS G++ + + + SKGF FV F+ +A
Sbjct: 323 AKYQGVNLYIKNLDDDIDDEKLRQEFSVYGVITSAKV-MCDEKDTSKGFGFVCFSSPDEA 381
Query: 272 ESAIQKFNGQKFGKRPIAVDWAVPKNIYSS 301
A+ + NG+ G +PI V A K I S
Sbjct: 382 TKAVTEMNGRMIGSKPIYVALAQRKEIRRS 411
>gi|356526850|ref|XP_003532029.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
G-A-like isoform 1 [Glycine max]
gi|356526852|ref|XP_003532030.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
G-A-like isoform 2 [Glycine max]
Length = 290
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
++ ++F P G V VY+ + TG+S+GF FV F + DA+ AI K NG + + V+
Sbjct: 224 DLLELFRPFGPVSRVYVAIDQKTGMSRGFGFVNFVNREDAQRAIGKLNGYGYDNLILRVE 283
Query: 292 WAVPK 296
WA P+
Sbjct: 284 WATPR 288
>gi|308493359|ref|XP_003108869.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
gi|308247426|gb|EFO91378.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
Length = 404
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 61/109 (55%), Gaps = 5/109 (4%)
Query: 191 LLHQKEIKGGTVWARQLGGEGSK---TQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVY 247
LL +E+K WA + G + SK T+ + + + ++ + ++++ F P G V +
Sbjct: 106 LLLDREMK--VNWAVEPGQQPSKVDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAK 163
Query: 248 IPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPK 296
+ +T+T SKG+ FV + + +AE AI++ NGQ G+R I +WA K
Sbjct: 164 VIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 212
>gi|226288243|gb|EEH43755.1| 28 kDa ribonucleoprotein [Paracoccidioides brasiliensis Pb18]
Length = 492
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L I NI F A N I + F+ G + V +P + ++G KGF +V+F+ +A SA +
Sbjct: 353 LFIGNIAFSADENMISETFAEYGSILGVRLPTDPESGRPKGFGYVQFSSIDEARSAFESL 412
Query: 279 NGQKFGKRPIAVDWAVPK 296
NG + R + +D++ P+
Sbjct: 413 NGSELAGRAMRLDFSTPR 430
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 416 KQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFK 475
K+T+ E +FI NL +++D E ++ F FGE+ V + T R KG G+++F
Sbjct: 237 KKTKVEPTEGGNLFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDTGRSKGFGYVEFT 296
Query: 476 TVEAATAAVSASKTTSGLGIFLKGRQLTV 504
E A A +A K T L GR+L V
Sbjct: 297 NAEDAVKAHAAKKDTE-----LDGRKLNV 320
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQR 55
+VT + + +GFGYV+F EDA +A K T + GRK+ V A R++ R
Sbjct: 278 IVTDRDTGRSKGFGYVEFTNAEDAVKAHAAKKDTELDGRKLNVDFANARSNAAPR 332
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 33/58 (56%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAA 483
+T+FI N+ F D + + F+ +G ++ + RPKG G+++F +++ A +A
Sbjct: 351 DTLFIGNIAFSADENMISETFAEYGSILGVRLPTDPESGRPKGFGYVQFSSIDEARSA 408
>gi|241147227|ref|XP_002405304.1| RNA binding motif protein, putative [Ixodes scapularis]
gi|215493703|gb|EEC03344.1| RNA binding motif protein, putative [Ixodes scapularis]
Length = 597
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 49/79 (62%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A E++++FS G + ++ +P TG +GFAFV F K DA+ A Q
Sbjct: 498 KILVRNIPFEATKKELQELFSVFGTLRDIRLPKKMAGTGRHRGFAFVDFLTKNDAKRAFQ 557
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 558 ALCQSTHLYGRR-LVLEWA 575
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
++++N+P K +EI+D F+ G + V +P G+ A V+F +A +A ++
Sbjct: 269 ILVKNLPAKTHPDEIRDAFAKFGTLSRVVLP---PWGIC---ALVEFQEPSEARTAFRRL 322
Query: 279 NGQKFGKRPIAVDWAVPKNIY 299
KF P+ ++WA P ++
Sbjct: 323 AYSKFKHVPLYLEWA-PVGVF 342
>gi|297740319|emb|CBI30501.3| unnamed protein product [Vitis vinifera]
Length = 194
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%)
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
+++++FS G + VY+ + TGLS+GF +V F + DAE AI K NG + + V+
Sbjct: 128 DLRELFSRFGQLTRVYVAIDHKTGLSRGFGYVNFVNREDAERAISKLNGYGYDSLILQVE 187
Query: 292 WAVPK 296
W+ P+
Sbjct: 188 WSTPR 192
>gi|225683278|gb|EEH21562.1| nuclear localization sequence-binding protein [Paracoccidioides
brasiliensis Pb03]
Length = 492
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L I NI F A N I + F+ G + V +P + ++G KGF +V+F+ +A SA +
Sbjct: 353 LFIGNIAFSADENMISETFAEYGSILGVRLPTDPESGRPKGFGYVQFSSIDEARSAFESL 412
Query: 279 NGQKFGKRPIAVDWAVPK 296
NG + R + +D++ P+
Sbjct: 413 NGSELAGRAMRLDFSTPR 430
Score = 46.2 bits (108), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 416 KQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFK 475
K+T+ E +FI NL +++D E ++ F FGE+ V + + R KG G+++F
Sbjct: 237 KKTKVEPTEGGNLFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSKGFGYVEFT 296
Query: 476 TVEAATAAVSASKTTSGLGIFLKGRQLTV 504
E A A +A K T L GR+L V
Sbjct: 297 NAEDAVKAHAAKKDTE-----LDGRKLNV 320
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQR 55
+VT + S +GFGYV+F EDA +A K T + GRK+ V A R++ R
Sbjct: 278 IVTDRDSGRSKGFGYVEFTNAEDAVKAHAAKKDTELDGRKLNVDFANARSNAAPR 332
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 33/58 (56%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAA 483
+T+FI N+ F D + + F+ +G ++ + RPKG G+++F +++ A +A
Sbjct: 351 DTLFIGNIAFSADENMISETFAEYGSILGVRLPTDPESGRPKGFGYVQFSSIDEARSA 408
>gi|396471523|ref|XP_003838892.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
gi|312215461|emb|CBX95413.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
Length = 490
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 17/137 (12%)
Query: 177 VLYTTVKSACASVALLHQKEIKGGTV-----WARQ---LGGEGSKTQKW---------KL 219
V + T A + A +HQ E+ G + RQ G + K+ L
Sbjct: 280 VEFATSADAAKAQAEMHQYELDGRPLNVDFSTPRQKPDAGKTNDRANKYGDKRSAPSNTL 339
Query: 220 IIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFN 279
+ N+ F + I+++F+ G + V +P + DTG KGF +V F + +A +A+ N
Sbjct: 340 FLGNLSFDCTNDSIQEIFAEYGNITRVSLPTDRDTGSIKGFGYVDFGSQEEATAALDALN 399
Query: 280 GQKFGKRPIAVDWAVPK 296
GQ R I +D+A P+
Sbjct: 400 GQDIAGRNIRIDYAAPR 416
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 411 KPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTG 470
K K++++ G + ++N +F+ NL +++D + +++ F FGE+V + + T R KG G
Sbjct: 220 KTKTVEEPAGAEGIKN-LFVGNLSWNIDEDWLRREFEGFGEIVGCRIITDRETGRGKGFG 278
Query: 471 FLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV 504
+++F AT+A +A L GR L V
Sbjct: 279 YVEF-----ATSADAAKAQAEMHQYELDGRPLNV 307
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
NT+F+ NL FD N+ +++ F+ +G + + T KG G++ F + E ATAA+
Sbjct: 337 NTLFLGNLSFDCTNDSIQEIFAEYGNITRVSLPTDRDTGSIKGFGYVDFGSQEEATAALD 396
Query: 486 A 486
A
Sbjct: 397 A 397
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Query: 208 GGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTC 267
G EG K L + N+ + + ++ F G + I + +TG KGF +V+F
Sbjct: 229 GAEGIKN----LFVGNLSWNIDEDWLRREFEGFGEIVGCRIITDRETGRGKGFGYVEFAT 284
Query: 268 KRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSG 302
DA A + + + RP+ VD++ P+ +G
Sbjct: 285 SADAAKAQAEMHQYELDGRPLNVDFSTPRQKPDAG 319
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHR 49
+ T + + +GFGYV F E+A A++ NG + GR I + +A R
Sbjct: 368 LPTDRDTGSIKGFGYVDFGSQEEATAALDALNGQDIAGRNIRIDYAAPR 416
>gi|302792100|ref|XP_002977816.1| ATP-binding cassette transporter, subfamily C, member 19, SmABCC19
[Selaginella moellendorffii]
gi|300154519|gb|EFJ21154.1| ATP-binding cassette transporter, subfamily C, member 19, SmABCC19
[Selaginella moellendorffii]
Length = 1494
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 55/95 (57%), Gaps = 6/95 (6%)
Query: 208 GGEGSK-TQKWK-----LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFA 261
GG GSK T +++ L + N+ + +++++F G + +++ + +TGL +GFA
Sbjct: 1388 GGAGSKETMRYRDDGNSLRVTNLSEDTREADLQELFGRFGSISRIFVASDRETGLGRGFA 1447
Query: 262 FVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPK 296
F+ F + DAE A++K +G + + V+WA P+
Sbjct: 1448 FITFVRREDAERAMKKLDGYGYDSLILHVEWAAPR 1482
>gi|451850002|gb|EMD63305.1| hypothetical protein COCSADRAFT_161812 [Cochliobolus sativus
ND90Pr]
Length = 489
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L I N+ F I+++F+ G V V +P + D+G KGF +V F + +A +A++
Sbjct: 337 LFIGNLSFDCTNETIQEVFAEYGNVTRVSLPTDRDSGALKGFGYVDFGSQEEATAALEAL 396
Query: 279 NGQKFGKRPIAVDWAVPKN 297
+GQ RP+ VD+A P++
Sbjct: 397 HGQDVAGRPLRVDFAAPRD 415
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
NT+FI NL FD NE +++ F+ +G V + + KG G++ F + E ATAA+
Sbjct: 335 NTLFIGNLSFDCTNETIQEVFAEYGNVTRVSLPTDRDSGALKGFGYVDFGSQEEATAALE 394
Query: 486 A 486
A
Sbjct: 395 A 395
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 421 EDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKF 474
ED ++N +F+ NL +++D + +++ F +FGE+V + + T R KG G+++F
Sbjct: 231 EDGVKN-LFVGNLSWNIDEDWLRREFESFGEIVGCRVITDRETGRAKGFGYVEF 283
>gi|449438193|ref|XP_004136874.1| PREDICTED: uncharacterized protein LOC101219227 [Cucumis sativus]
Length = 283
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%)
Query: 214 TQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAES 273
T + L++ NI F+ +++ +F G V +++IP + TG S+GFAFV++ +A+
Sbjct: 13 TDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
Query: 274 AIQKFNGQKFGKRPIAVDWA 293
A+++ +G R I V +A
Sbjct: 73 AVERLDGTMVDGREITVQFA 92
>gi|412993042|emb|CCO16575.1| predicted protein [Bathycoccus prasinos]
Length = 296
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 44/76 (57%)
Query: 221 IRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNG 280
+ N+ + +++++F P G V +Y+ N +TG S+GFAFV F + D + AI + +G
Sbjct: 217 VSNLSEDTREQDLQELFRPFGPVTRIYVAFNRETGESRGFAFVNFVNRDDGQRAIDRLDG 276
Query: 281 QKFGKRPIAVDWAVPK 296
+ + V+W+ P+
Sbjct: 277 FGYDNLILRVEWSAPR 292
>gi|365982081|ref|XP_003667874.1| hypothetical protein NDAI_0A04750 [Naumovozyma dairenensis CBS 421]
gi|343766640|emb|CCD22631.1| hypothetical protein NDAI_0A04750 [Naumovozyma dairenensis CBS 421]
Length = 843
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 71/134 (52%), Gaps = 11/134 (8%)
Query: 164 GLAQEGCKMDASAVLY----TTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKL 219
G A+ K A+AV+ T + + L H++ KG ++ +KT+ K+
Sbjct: 692 GFAEFRTKEQANAVIAAMDGTVIDGHKIQLKLSHRQGTKGNNTSSK------NKTKSAKI 745
Query: 220 IIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFN 279
I++N+PF+A ++ ++F+ G + +V +P D ++GFAF++F ++AE+A+ +
Sbjct: 746 IVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKS-ARGFAFIEFLLPKEAENAMDQLQ 804
Query: 280 GQKFGKRPIAVDWA 293
G R + + +A
Sbjct: 805 GVHLLGRRLVMQYA 818
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RNI + + + + +FSP G + V+I +T TG SKGFA++ F +DA A +
Sbjct: 330 RLFLRNILYSSTEEDFRKLFSPFGELEEVHIALDTRTGQSKGFAYILFKDPKDALQAYIE 389
Query: 278 FNGQKFGKRPIAV 290
+ Q F R + +
Sbjct: 390 LDKQIFQGRLLHI 402
>gi|356526854|ref|XP_003532031.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
G-A-like isoform 3 [Glycine max]
Length = 314
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
++ ++F P G V VY+ + TG+S+GF FV F + DA+ AI K NG + + V+
Sbjct: 248 DLLELFRPFGPVSRVYVAIDQKTGMSRGFGFVNFVNREDAQRAIGKLNGYGYDNLILRVE 307
Query: 292 WAVPK 296
WA P+
Sbjct: 308 WATPR 312
>gi|326524289|dbj|BAK00528.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 429
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 102/244 (41%), Gaps = 46/244 (18%)
Query: 151 VTYPLPKEELEQHGLAQEGCKM------DASAVLYTTVKSACASVALLHQKEIKGGTV-- 202
VT L +E + G + +GCK+ V Y SA ++ L+ K+I G +
Sbjct: 72 VTEALLREVFQSAG-SVDGCKLIRKEKSSYGFVDYYERGSAALAILTLNGKQIFGQPIRV 130
Query: 203 -WARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTD-------- 253
WA G T + + + ++ + + + FS Y P+ +D
Sbjct: 131 NWAYASGQREDTTDHFHIFVGDLSPEVTDSALFAFFS-------AYSPNCSDARVMWDQK 183
Query: 254 TGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGD 313
TG S+G+ FV F ++DA+SAI NGQ G R I +WA + GA +G
Sbjct: 184 TGRSRGYGFVSFRNQQDAQSAINDLNGQWLGNRQIRCNWA-------TKGANSGEDQLA- 235
Query: 314 GNSDSGSDDDLGDDDAETASDDSNSSEKEDLPSNADFDEEV-------DIARKVLNKLTS 366
SDS S D+ ++ E A SN ED P N V ++ + VL++
Sbjct: 236 --SDSKSIVDVNNNFTENAKQKSN----EDAPENNPLYRTVYVGNLAHEVTQDVLHRFFH 289
Query: 367 TTGS 370
G+
Sbjct: 290 ALGA 293
>gi|410927616|ref|XP_003977237.1| PREDICTED: cleavage stimulation factor subunit 2-like [Takifugu
rubripes]
Length = 497
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 48/75 (64%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VGLV + + ++ +TG KG+ F ++ + A SA++
Sbjct: 31 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 90
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 91 NGREFSGRALRVDNA 105
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV 484
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 30 SVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 87
>gi|383158051|gb|AFG61373.1| Pinus taeda anonymous locus 2_5255_01 genomic sequence
gi|383158053|gb|AFG61374.1| Pinus taeda anonymous locus 2_5255_01 genomic sequence
Length = 96
Score = 58.5 bits (140), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 44/76 (57%)
Query: 221 IRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNG 280
+ N+ + +++++F P G + VY+ + TG+S+GF F+ F + DA+ AI K NG
Sbjct: 19 VTNLSEDTREADLQELFKPFGHITRVYVAVDQRTGMSRGFGFINFANREDAQRAINKLNG 78
Query: 281 QKFGKRPIAVDWAVPK 296
+ + V+WA P+
Sbjct: 79 YGYDNLILRVEWATPR 94
>gi|389633057|ref|XP_003714181.1| nuclear localization sequence binding protein [Magnaporthe oryzae
70-15]
gi|351646514|gb|EHA54374.1| nuclear localization sequence binding protein [Magnaporthe oryzae
70-15]
gi|440473688|gb|ELQ42470.1| 28 kDa ribonucleoprotein [Magnaporthe oryzae Y34]
gi|440486239|gb|ELQ66126.1| 28 kDa ribonucleoprotein [Magnaporthe oryzae P131]
Length = 486
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+PF A + + FS V V ++ +P ++G KGF +V F DA+SA ++
Sbjct: 344 LFVGNLPFDADEDSVGAFFSEVAEVKSLRLPTEQESGRRKGFGYVTFNSVEDAKSAFEQL 403
Query: 279 NGQKFGKRPIAVDWAVPK 296
NGQ R +D++ P+
Sbjct: 404 NGQSINGRNCRLDYSTPR 421
Score = 46.2 bits (108), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAA 483
+T+F+ NLPFD D + V FS EV S Q + R KG G++ F +VE A +A
Sbjct: 342 DTLFVGNLPFDADEDSVGAFFSEVAEVKSLRLPTEQESGRRKGFGYVTFNSVEDAKSA 399
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLE 53
+ T++ S +GFGYV F +EDA A E NG S+ GR + ++ R E
Sbjct: 373 LPTEQESGRRKGFGYVTFNSVEDAKSAFEQLNGQSINGRNCRLDYSTPRPPRE 425
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRAS 51
++T + S +GFGYV FA E+A +A K G + GR+I V + +A+
Sbjct: 270 VITDRESGRSKGFGYVDFATPEEAEKAHGEKQGAFIDGREIKVDFSTGKAT 320
>gi|7446337|pir||T15542 hypothetical protein C18A3.5 - Caenorhabditis elegans
Length = 448
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 61/109 (55%), Gaps = 5/109 (4%)
Query: 191 LLHQKEIKGGTVWARQLGGEGSK---TQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVY 247
LL +E+K WA + G + SK T+ + + + ++ + ++++ F P G V +
Sbjct: 148 LLLDREMK--VNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAK 205
Query: 248 IPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPK 296
+ +T+T SKG+ FV + + +AE AI++ NGQ G+R I +WA K
Sbjct: 206 VIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 254
>gi|448878334|gb|AGE46130.1| arginine/serine-rich splicing factor SCL28 transcript I [Sorghum
bicolor]
Length = 241
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L+IRNI A+ +I+ F G + +VY+P N T +GF FVKF DA A Q+
Sbjct: 59 LLIRNISLTARPEDIRVPFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQEM 118
Query: 279 NGQKFGKRPIAVDWA 293
N Q G R I++ +A
Sbjct: 119 NHQVIGGREISIVYA 133
>gi|255581357|ref|XP_002531488.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223528897|gb|EEF30895.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 257
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 48/80 (60%)
Query: 214 TQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAES 273
T + L++ NI F+ +++ +F G V +++IP + TG S+GFAFV++ +A+
Sbjct: 13 TDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQK 72
Query: 274 AIQKFNGQKFGKRPIAVDWA 293
A+++ +G+ R I V +A
Sbjct: 73 AVERLDGRVVDGREITVQFA 92
>gi|46111259|ref|XP_382687.1| hypothetical protein FG02511.1 [Gibberella zeae PH-1]
Length = 767
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 218 KLIIRNIPFK-AKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
KLIIRN+P+ K +++ +F G V +P G KGF FV + +AE A++
Sbjct: 145 KLIIRNLPWSIKKAEQLEHLFRSYGKVKFADLPQTK--GKLKGFGFVTLRGRPNAERALE 202
Query: 277 KFNGQKFGKRPIAVDWAVPKNIY 299
NG++ R +AVDWAV K+ +
Sbjct: 203 AINGKEIDGRTLAVDWAVDKDTW 225
>gi|366987527|ref|XP_003673530.1| hypothetical protein NCAS_0A05890 [Naumovozyma castellii CBS 4309]
gi|342299393|emb|CCC67147.1| hypothetical protein NCAS_0A05890 [Naumovozyma castellii CBS 4309]
Length = 415
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+ F A + I ++FS G + +V IP + +T KGF +V++T DA+ A++
Sbjct: 264 LFLGNLSFNADRDAISELFSKYGEIISVRIPTHPETEQPKGFGYVQYTNVEDAKKALEGL 323
Query: 279 NGQKFGKRPIAVDWAVPK 296
G+ RP+ +D++ P+
Sbjct: 324 QGEYIDNRPVRLDYSTPR 341
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%)
Query: 423 ELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATA 482
E T+F+ NL F+ D + + + FS +GE++S H T++PKG G++++ VE A
Sbjct: 259 EPSETLFLGNLSFNADRDAISELFSKYGEIISVRIPTHPETEQPKGFGYVQYTNVEDAKK 318
Query: 483 AV 484
A+
Sbjct: 319 AL 320
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 416 KQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFK 475
++TEGE TIF+ L + +D+E +K+ F G VVS ++ + T R +G G++ F+
Sbjct: 155 QKTEGE---PATIFVGRLSWSIDDEWLKKEFEHIGGVVSARVIMERGTDRSRGYGYVDFE 211
Query: 476 TVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLA 513
A A+ + G + GR++ V + K A
Sbjct: 212 DKSYAEKAIKEMQ-----GKEIDGREINVDMSTSKPAA 244
>gi|393905993|gb|EJD74133.1| eukaryotic translation initiation factor 3 subunit G [Loa loa]
Length = 288
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%)
Query: 221 IRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNG 280
+ N+P + E++ +F VG V V+I + T KGFAFV F + E+AIQK NG
Sbjct: 212 VTNLPEECDDEELRALFGTVGTVNRVFIAKDKHTNKPKGFAFVTFEHRSQTEAAIQKLNG 271
Query: 281 QKFGKRPIAVDWAVPKN 297
K + V+W P N
Sbjct: 272 YKLDHLVLKVEWTRPNN 288
>gi|391337692|ref|XP_003743199.1| PREDICTED: uncharacterized protein LOC100907227 [Metaseiulus
occidentalis]
Length = 256
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+ ++ V ++K +F G V +VYIP N S+GFAFV+F +RDAE A+
Sbjct: 76 LKVDNLTYRTTVEDLKRVFRKHGDVGDVYIPRNPRNNESRGFAFVRFFDRRDAEEAMDAL 135
Query: 279 NGQKFGKRPIAVDWAVPKNIYSSGGAAAG 307
+G + R + + A Y+ G +G
Sbjct: 136 DGYRLDGRELRIAMAK----YARPGGRSG 160
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
L + N+ ++ V ++K +F G V +VYIP N S+GFAFV+F
Sbjct: 17 LKVDNLTYRTTVEDLKRVFRKHGDVGDVYIPRNPRNNESRGFAFVRF 63
>gi|324532508|gb|ADY49239.1| Cleavage stimulation factor subunit 2 [Ascaris suum]
Length = 115
Score = 58.2 bits (139), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 42/78 (53%)
Query: 216 KWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAI 275
K+ + + NIP+ ++ + FS G V NV + ++ DTG KGF F F + A+ AI
Sbjct: 36 KFSVYVGNIPYNCSEMDVGNFFSQAGPVVNVRLVYDRDTGRPKGFGFCDFADEISAQGAI 95
Query: 276 QKFNGQKFGKRPIAVDWA 293
NG F R + V+WA
Sbjct: 96 NTLNGADFNGRALRVNWA 113
>gi|224069480|ref|XP_002326357.1| predicted protein [Populus trichocarpa]
gi|222833550|gb|EEE72027.1| predicted protein [Populus trichocarpa]
Length = 286
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%)
Query: 208 GGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTC 267
G E S + +L + N+PF ++ D+F G V V + ++ TG S+GF FV +
Sbjct: 82 GDEPSFSPDLQLFVGNLPFNVNSAQLADLFKSAGNVEMVEVKYDKVTGRSRGFGFVTMST 141
Query: 268 KRDAESAIQKFNGQKFGKRPIAVDWAVP 295
+ E+A Q+FNG + RP+ V+ P
Sbjct: 142 IEEVEAASQQFNGYELDGRPLRVNSGPP 169
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 6/108 (5%)
Query: 188 SVALLHQKEIKGGTVWARQLGGEGSKT--QKWKLIIRNIPFKAKVNEIKDMFSPVGLVWN 245
S + L Q+E ++R G G +T ++ + N+ + + ++ +F G V +
Sbjct: 175 SFSRLPQRE----NSFSRGPGARGGETFDSSNRVYVGNLSWNVDDSALESLFREKGKVMD 230
Query: 246 VYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWA 293
+ ++ D+G SKGF FV ++ + E A+ NG + R I V A
Sbjct: 231 AKVVYDRDSGRSKGFGFVTYSSAEEVEDAVDSLNGAELDGRAIRVSVA 278
>gi|268569436|ref|XP_002640522.1| Hypothetical protein CBG18684 [Caenorhabditis briggsae]
Length = 84
Score = 58.2 bits (139), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 46/77 (59%)
Query: 217 WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
+ + + N P++ E+ D FS VG V NV I + +TG +GFAFV+F+ ++ AE A+
Sbjct: 6 FSIYVGNAPYQTTEQEMGDFFSSVGTVTNVRIVLDRETGRPRGFAFVEFSEQQSAERAVN 65
Query: 277 KFNGQKFGKRPIAVDWA 293
+ NG F R + V+ A
Sbjct: 66 ELNGADFNGRQLRVNIA 82
Score = 41.2 bits (95), Expect = 1.6, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
+I++ N P+ +E+ FS+ G V + VL + T RP+G F++F ++A AV+
Sbjct: 7 SIYVGNAPYQTTEQEMGDFFSSVGTVTNVRIVLDRETGRPRGFAFVEFSEQQSAERAVNE 66
Query: 487 SKTTSGLGIFLKGRQLTV 504
G GRQL V
Sbjct: 67 LN-----GADFNGRQLRV 79
>gi|358331785|dbj|GAA50546.1| serine/arginine-rich splicing factor 2 [Clonorchis sinensis]
Length = 340
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 12/118 (10%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+ ++ + +++ +FS G V +VYIP + T S+GFAFV++ R+A+SAI++
Sbjct: 17 LKVDNLAYRTTIEDLRRVFSRYGEVGDVYIPRDPYTFESRGFAFVRYPTDREADSAIREM 76
Query: 279 NGQKFGKRPIAVD---WAVPKNIYSSGGAAAGV---------QNKGDGNSDSGSDDDL 324
+G++ R I V + P + A + + DGNSD S+D L
Sbjct: 77 DGRRIDGREIRVQRAKYGRPNSRRMRYFACYSLKVAYKVWLPEVTTDGNSDEYSEDLL 134
>gi|367043706|ref|XP_003652233.1| hypothetical protein THITE_2113488 [Thielavia terrestris NRRL 8126]
gi|346999495|gb|AEO65897.1| hypothetical protein THITE_2113488 [Thielavia terrestris NRRL 8126]
Length = 533
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+ F A + F+ V V ++ IP + ++G KGFA+V F+ DA++A +
Sbjct: 395 LFVGNLSFSANEESVSAFFNKVAKVQSLRIPTDQESGRPKGFAYVTFSSVDDAKAAFEAL 454
Query: 279 NGQKFGKRPIAVDWAVPKN 297
NG RP+ +D+A P++
Sbjct: 455 NGSDLDGRPVRLDFAKPRD 473
>gi|218200049|gb|EEC82476.1| hypothetical protein OsI_26921 [Oryza sativa Indica Group]
Length = 271
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 47/77 (61%)
Query: 217 WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
+ L++ NI F+ +++ +F G V ++YIP + TG S+GFAFV++ + +A+ A+
Sbjct: 16 YSLLVLNITFRTTADDLSPLFEKYGEVVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVD 75
Query: 277 KFNGQKFGKRPIAVDWA 293
+ +G+ R I V +A
Sbjct: 76 RLDGRVVDGREIMVQFA 92
>gi|225449382|ref|XP_002282439.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G-B
[Vitis vinifera]
Length = 301
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%)
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
++ ++F G V VY+ + TG+S+GF FV F K DAE AI K NG + + V+
Sbjct: 235 DLHELFRTFGPVSRVYVAIDQKTGMSRGFGFVNFVNKEDAERAINKLNGYGYDNLILRVE 294
Query: 292 WAVPK 296
WA P+
Sbjct: 295 WATPR 299
>gi|346323732|gb|EGX93330.1| eukaryotic translation initiation factor 3, subunit 4 [Cordyceps
militaris CM01]
Length = 296
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 197 IKGGTVWARQLGGE--GSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDT 254
++GG V A + G G + L + N+ A+ NE++DMF G V V++ + +T
Sbjct: 194 MRGGAVSASAMAGSKYGERDDLATLRVTNVSEMAEENELRDMFERFGRVTRVFLAKDRET 253
Query: 255 GLSKGFAFVKFTCKRDAESAIQKFNGQKF 283
G++KGFAF+ F + DA A K +G F
Sbjct: 254 GMAKGFAFISFADRGDAVKAASKMDGYGF 282
>gi|302507033|ref|XP_003015473.1| hypothetical protein ARB_06599 [Arthroderma benhamiae CBS 112371]
gi|291179045|gb|EFE34833.1| hypothetical protein ARB_06599 [Arthroderma benhamiae CBS 112371]
Length = 479
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L I NI F A N ++++FS G + + +P + ++G KGF +V+F+ +A +A++
Sbjct: 346 LFIGNISFSADENMVQELFSKYGAIQGIRLPTDPESGRPKGFGYVQFSSVDEARAALEAE 405
Query: 279 NGQKFGKRPIAVDWAVPK 296
+G G R I +D++ P+
Sbjct: 406 HGADLGGRSIRLDFSTPR 423
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+F+ NL +++D E ++ F FGE+ V + + R +G G+++F VE A A +A
Sbjct: 240 LFVGNLSWNVDEEWLRSEFEEFGELAGTRIVTDRESGRSRGFGYVEFVNVEDAVKAHTAK 299
Query: 488 KTTSGLGIFLKGRQLTV 504
K L GR++ +
Sbjct: 300 KDAE-----LDGRKMNL 311
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHR 49
+VT + S RGFGYV+F +EDA +A K + GRK+ + +A R
Sbjct: 269 IVTDRESGRSRGFGYVEFVNVEDAVKAHTAKKDAELDGRKMNLDYANAR 317
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHR 49
+ T S +GFGYVQF+ +++A A+E ++G +GGR I + + R
Sbjct: 375 LPTDPESGRPKGFGYVQFSSVDEARAALEAEHGADLGGRSIRLDFSTPR 423
>gi|62955567|ref|NP_001017797.1| cold inducible RNA binding protein [Danio rerio]
gi|62202782|gb|AAH93299.1| Zgc:112425 [Danio rerio]
gi|63100518|gb|AAH95030.1| Zgc:112425 [Danio rerio]
gi|182889498|gb|AAI65256.1| Zgc:112425 protein [Danio rerio]
Length = 185
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%)
Query: 214 TQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAES 273
+ + KL I + F ++D FS G++ NV++ N +T S+GF FV F DA+
Sbjct: 2 SDEGKLFIGGLSFDTTEQSLEDAFSKYGVITNVHVARNRETNRSRGFGFVTFENPDDAKD 61
Query: 274 AIQKFNGQKFGKRPIAVDWA 293
A++ NG+ R I VD A
Sbjct: 62 ALEGMNGKSVDGRTIRVDEA 81
>gi|348515337|ref|XP_003445196.1| PREDICTED: cleavage stimulation factor subunit 2-like [Oreochromis
niloticus]
Length = 478
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 48/75 (64%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VGLV + + ++ +TG KG+ F ++ + A SA++
Sbjct: 31 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 90
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 91 NGREFSGRALRVDNA 105
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV 484
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 30 SVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 87
>gi|328869180|gb|EGG17558.1| hypothetical protein DFA_08554 [Dictyostelium fasciculatum]
Length = 926
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN---TDTGLSKGFAFVKFTCKRDAESAI 275
+I+RN+ + ++++FS G + + +P T T ++KGFAF+ ++ K AE A+
Sbjct: 262 IILRNLSESVTMQRLEELFSVHGEILLIKMPTKLSATGTQVNKGFAFILYSSKSSAEKAL 321
Query: 276 QKFNGQKFGKRPIAVDWAVPKNIY 299
+ N RP A+DWA+P++ Y
Sbjct: 322 KDVNSTDIQGRPCAIDWALPQSEY 345
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 216 KWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSK-GFAFVKFTCKRDAESA 274
K ++ ++N+PF +E+ FS VG + ++ + S G AF+ F AE A
Sbjct: 7 KKQIFVKNLPFAFSKDELDTYFSDVGPIKRSFLINRPGQNSSTTGEAFLWFALDGHAEKA 66
Query: 275 IQKFNGQKFGKRPIAVDWAVPK 296
+ + NG G R I V A PK
Sbjct: 67 VTEKNGTMLGGRKIIVQIAKPK 88
>gi|299739685|ref|XP_002910225.1| translation initiation factor eIF3g [Coprinopsis cinerea
okayama7#130]
gi|298403892|gb|EFI26731.1| translation initiation factor eIF3g [Coprinopsis cinerea
okayama7#130]
Length = 293
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 208 GGE---GSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVK 264
GGE GS+ L + NI N+++++F G V VY+ + +TG KGFAFV
Sbjct: 198 GGERMGGSREDLPTLRVTNISEDTAENDLRELFGVFGRVARVYVGRDRETGAGKGFAFVS 257
Query: 265 FTCKRDAESAIQKFNGQKFGKRPIAVDWAVPK 296
F + A+ A++K NG+ + ++V W+ P+
Sbjct: 258 FEDRAVAQRAMEKVNGRGYDNLILSVQWSQPR 289
>gi|290993156|ref|XP_002679199.1| RNA binding domain-containing protein [Naegleria gruberi]
gi|284092815|gb|EFC46455.1| RNA binding domain-containing protein [Naegleria gruberi]
Length = 763
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 131/303 (43%), Gaps = 28/303 (9%)
Query: 211 GSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRD 270
G + + ++I++ +P ++ K +F G V + I T TG S+ F ++ + +
Sbjct: 29 GKELKLTRIIVKGLPSHVTNSQFKKLFEEFGQVTDAKIMQ-TKTGKSRCFGYIGYKKHEE 87
Query: 271 AESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAE 330
A AI + + G I V++A+P N + N S SG
Sbjct: 88 AVHAINERHQTFIGMAKIIVEFALPYNDSRLDAPRSKHSNVKAATSASGVK--------- 138
Query: 331 TASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSD 390
S++ EK+D+ N + D+ +++ +K + L DD +K +K +
Sbjct: 139 -----SSTFEKKDV--NEEVDQFLNVGKKKASAPKFWENDLEDEFDDQ--LKKDKIINEK 189
Query: 391 KTVNESA---KVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFS 447
NESA K + SK+ ++ K L E +DE +F+ NL F +E+K+ F
Sbjct: 190 DDNNESATKKKREEDSKIEPAE-KEDVLYFDENDDEDTGRLFVYNLHFTTTEDELKELFE 248
Query: 448 AFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKA 507
FGE+ + TK +G F+ F E A A A + IF +GR + + KA
Sbjct: 249 PFGEISELHIPIDNETKISRGVAFVHFLIPENADKAKKALHNS----IF-QGRMIHIAKA 303
Query: 508 LDK 510
+K
Sbjct: 304 KEK 306
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 103/241 (42%), Gaps = 43/241 (17%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L + N+ F +E+K++F P G + ++IP + +T +S+G AFV F +A+ A +
Sbjct: 228 RLFVYNLHFTTTEDELKELFEPFGEISELHIPIDNETKISRGVAFVHFLIPENADKAKKA 287
Query: 278 FNGQKFGKRPIAV-------DWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLG----- 325
+ F R I + ++ V K G + + +GS +
Sbjct: 288 LHNSIFQGRMIHIAKAKEKPNFNVEKENMFLGKSKFKREQLKKLREQAGSSHNWNATHMA 347
Query: 326 -DDDAETASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGN 384
+ E+ S S+ E L +N DF VD V L T L+K
Sbjct: 348 TNTVMESMSRQLGVSKSELLMNNKDFS-NVDDNAAVRMALAET-----------ELIKQT 395
Query: 385 KEQDSDKTVNESAKVSDVSKLNSSKSKPKS-LKQTEGEDELQNTIFICNLPFDLDNEEVK 443
KE+ D +N + LN KP + +KQ+ + TI + N+PF+ + E++K
Sbjct: 396 KEELQDHGIN-------LDLLN----KPANQVKQS------RTTILVKNIPFNENTEKLK 438
Query: 444 Q 444
Q
Sbjct: 439 Q 439
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL++RN+ F+A ++ +FS G V V +P + +GFAF++F ++ +A Q
Sbjct: 648 KLVVRNVAFEATRQDLLQLFSAYGQVKTVRLPKKVGSNSHRGFAFIEFVSPKECHAAYQA 707
Query: 278 FNGQKFGKRPIAVDWA 293
R + ++++
Sbjct: 708 LKHSHLYGRTLKIEFS 723
>gi|432875366|ref|XP_004072806.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oryzias latipes]
Length = 386
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 78/168 (46%), Gaps = 18/168 (10%)
Query: 151 VTYPLPKEELEQHGLAQEGCKM--DASA------VLYTTVKSACASVALLHQKEIKGGTV 202
VT PL + Q G + CKM D + V + + A AS+A ++ ++I G V
Sbjct: 18 VTEPLILQVFTQIGPCKS-CKMIVDTAGNDPYCFVEFYDHRHAAASLAAMNGRKIMGKEV 76
Query: 203 ---WARQLGGEGSKTQK-WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSK 258
WA + T + + + ++ + ++K F+P G + + + + TG SK
Sbjct: 77 KVNWATTPTSQKKDTSNHFHVFVGDLSPEITTEDVKAAFAPFGRISDARVVKDMATGKSK 136
Query: 259 GFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAV-----PKNIYSS 301
G+ FV F K DAE+AIQ GQ G R I +WA PK Y S
Sbjct: 137 GYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNWATRKPPAPKTTYES 184
>gi|195574479|ref|XP_002105216.1| GD21365 [Drosophila simulans]
gi|194201143|gb|EDX14719.1| GD21365 [Drosophila simulans]
Length = 363
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%)
Query: 207 LGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFT 266
L G SK +++ + + ++ + + ++KD F+P G + + + + T SKG+ FV F
Sbjct: 87 LVGNNSKPEQFHIFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFV 146
Query: 267 CKRDAESAIQKFNGQKFGKRPIAVDWAVPK 296
K +AE+AI NGQ G R I +WA K
Sbjct: 147 KKSEAETAITAMNGQWLGSRSIRTNWATRK 176
>gi|47086779|ref|NP_997793.1| cytotoxic granule-associated RNA binding protein 1 [Danio rerio]
gi|28279551|gb|AAH45368.1| Cytotoxic granule-associated RNA binding protein 1 [Danio rerio]
Length = 386
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 9/128 (7%)
Query: 183 KSACASVALLHQKEIKGGTV---WARQLGGEGSKTQK-WKLIIRNIPFKAKVNEIKDMFS 238
+ A AS+A ++ ++I G V WA + T + + + ++ + ++I+ F+
Sbjct: 58 RHAAASLAAMNGRKIMGKEVKVNWATSPSSQKKDTSNHFHVFVGDLSPEITTDDIRAAFA 117
Query: 239 PVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAV---- 294
P G + + + + TG SKG+ FV F K DAE+AIQ+ GQ G R I +WA
Sbjct: 118 PFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPP 177
Query: 295 -PKNIYSS 301
PK Y +
Sbjct: 178 APKATYET 185
>gi|253683353|dbj|BAH84828.1| TIA-1-related RNA binding protein [Spodoptera frugiperda]
Length = 283
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 38/64 (59%)
Query: 233 IKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDW 292
++D F+P G + N I + T SKG+AFV F K DAE+AIQ NGQ G R I +W
Sbjct: 112 LRDAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNW 171
Query: 293 AVPK 296
+ K
Sbjct: 172 STRK 175
>gi|432877328|ref|XP_004073146.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
isoform 1 [Oryzias latipes]
Length = 494
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 48/75 (64%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VGLV + + ++ +TG KG+ F ++ + A SA++
Sbjct: 31 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 90
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 91 NGREFSGRALRVDNA 105
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV 484
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 30 SVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 87
>gi|452001822|gb|EMD94281.1| hypothetical protein COCHEDRAFT_1094167 [Cochliobolus
heterostrophus C5]
Length = 501
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L I N+ F I+++F+ G V V +P + D+G KGF +V F + +A +A++
Sbjct: 350 LFIGNLSFDCTNETIQEVFAEYGNVTRVSLPTDRDSGALKGFGYVDFGSQEEATAALEAL 409
Query: 279 NGQKFGKRPIAVDWAVPKN 297
GQ RP+ VD+A P++
Sbjct: 410 QGQDVAGRPLRVDFAAPRD 428
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
NT+FI NL FD NE +++ F+ +G V + + KG G++ F + E ATAA+
Sbjct: 348 NTLFIGNLSFDCTNETIQEVFAEYGNVTRVSLPTDRDSGALKGFGYVDFGSQEEATAALE 407
Query: 486 ASKTTSGLGIFLKGRQLTV 504
A + G + GR L V
Sbjct: 408 ALQ-----GQDVAGRPLRV 421
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 421 EDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKF 474
ED ++N +F+ NL +++D + +++ F +FGE+V + + T R KG G+++F
Sbjct: 244 EDGVKN-LFVGNLSWNIDEDWLRREFESFGEIVGCRVITDRETGRAKGFGYVEF 296
>gi|356499101|ref|XP_003518382.1| PREDICTED: uncharacterized protein LOC100804294 [Glycine max]
Length = 276
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L++RNIP + E++ F G V +VYIP + +G +GFAFV+F DA A
Sbjct: 49 LLVRNIPLDCRPEELRVPFERFGPVRDVYIPKDYYSGEPRGFAFVQFVDPYDASEAQYHM 108
Query: 279 NGQKFGKRPIAV 290
N Q F R I+V
Sbjct: 109 NRQIFAGREISV 120
>gi|356553842|ref|XP_003545260.1| PREDICTED: uncharacterized protein LOC100792397 [Glycine max]
Length = 271
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L++RNIP + E++ F G V +VYIP + +G +GFAFV+F DA A
Sbjct: 42 LLVRNIPLDCRPEELRVPFERFGPVRDVYIPKDYYSGEPRGFAFVQFVDPYDASEAQYHM 101
Query: 279 NGQKFGKRPIAV 290
N Q F R I+V
Sbjct: 102 NRQIFAGREISV 113
>gi|341882516|gb|EGT38451.1| hypothetical protein CAEBREN_23840 [Caenorhabditis brenneri]
Length = 84
Score = 58.2 bits (139), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 47/80 (58%)
Query: 214 TQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAES 273
+Q + + + N PF+ +I FS VG V NV I ++ +TG +GFAFV+F + A+
Sbjct: 2 SQGFSVYVGNAPFQTTEEQIGQFFSNVGQVNNVRIVYDRETGRPRGFAFVEFADEAAAQR 61
Query: 274 AIQKFNGQKFGKRPIAVDWA 293
A+Q+ NG F R + V+ A
Sbjct: 62 AVQELNGADFNGRQLRVNLA 81
Score = 41.6 bits (96), Expect = 1.3, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++++ N PF E++ Q FS G+V + V + T RP+G F++F AA AV
Sbjct: 6 SVYVGNAPFQTTEEQIGQFFSNVGQVNNVRIVYDRETGRPRGFAFVEFADEAAAQRAVQE 65
Query: 487 SKTTSGLGIFLKGRQLTVLKALDK 510
G GRQL V A +K
Sbjct: 66 LN-----GADFNGRQLRVNLANNK 84
>gi|116071793|ref|ZP_01469061.1| RNA-binding region RNP-1 [Synechococcus sp. BL107]
gi|116065416|gb|EAU71174.1| RNA-binding region RNP-1 [Synechococcus sp. BL107]
Length = 229
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%)
Query: 214 TQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAES 273
TQ + + N+PF+A+ ++ ++F+ G V N +P DTG +GFAFV+ + E+
Sbjct: 28 TQNVSIFVGNLPFRAEQEDVTELFAQFGEVVNCALPLERDTGRKRGFAFVEMSDDAAEEA 87
Query: 274 AIQKFNGQKFGKRPIAVDWAVPK 296
AI+ G + RP+ ++ A P+
Sbjct: 88 AIEGLQGAELMGRPLRINKAEPR 110
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
+IF+ NLPF + E+V + F+ FGEVV+ L + T R +G F++ A AA+
Sbjct: 32 SIFVGNLPFRAEQEDVTELFAQFGEVVNCALPLERDTGRKRGFAFVEMSDDAAEEAAIEG 91
Query: 487 SKTTSGLGIFLKGRQLTVLKA 507
+ G L GR L + KA
Sbjct: 92 LQ-----GAELMGRPLRINKA 107
>gi|255730993|ref|XP_002550421.1| hypothetical protein CTRG_04719 [Candida tropicalis MYA-3404]
gi|240132378|gb|EER31936.1| hypothetical protein CTRG_04719 [Candida tropicalis MYA-3404]
Length = 755
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 215 QKWKLIIRNIPFKAK-VNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAES 273
++ +LIIRN+P+ K +++K +F+ G V++ YIP G GFAFV K AE
Sbjct: 138 RRARLIIRNLPWSCKKPDQLKKIFNKYGAVFDAYIPKKK-GGQMCGFAFVIMKKKSAAEK 196
Query: 274 AIQKFNGQKFGKRPIAVDWAVPKNIY 299
A+++ G K R +AVD+AV K+ +
Sbjct: 197 AVKECQGLKIDGREVAVDFAVEKSKW 222
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 18/123 (14%)
Query: 412 PKSLKQTEGEDEL-QNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVT-----KR 465
P S K T ED L T+F+ ++PF+ +EE+ + FS FVPV H V K+
Sbjct: 19 PVSTKSTPSEDGLDHKTLFVRSIPFEATSEELSEFFS------QFVPVKHAVIVTDNEKK 72
Query: 466 PKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNET 525
+G GF+ F + A+ S+ T G L+ + V K D+K D+ + +N++
Sbjct: 73 SRGFGFVSFTLDDDCLTALVESRKTKFKGRLLR---VDVAKRRDRK---DQSTQEGRNKS 126
Query: 526 NDH 528
ND+
Sbjct: 127 NDN 129
Score = 43.1 bits (100), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 212 SKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
+K + + + +RNIP+ A +K+ FS G V + +TGLSKG AFV F
Sbjct: 316 NKQEAYSVFVRNIPYDADAESLKEHFSTFGPVKYALPVVDKETGLSKGSAFVAF 369
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L +R+IPF+A E+ + FS V + I + + S+GF FV FT D +A+ +
Sbjct: 36 LFVRSIPFEATSEELSEFFSQFVPVKHAVIVTDNEKK-SRGFGFVSFTLDDDCLTALVES 94
Query: 279 NGQKFGKRPIAVDWA 293
KF R + VD A
Sbjct: 95 RKTKFKGRLLRVDVA 109
>gi|217072826|gb|ACJ84773.1| unknown [Medicago truncatula]
Length = 232
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL + N PF ++ +F G V + +N T LS+GF FV +AESA++K
Sbjct: 110 KLFVGNFPFDVDSEKLAMLFGQAGTVEIAEVIYNRQTDLSRGFGFVTMNTVEEAESAVEK 169
Query: 278 FNGQKFGKRPIAVDWAVPK 296
FNG + R + V+ A PK
Sbjct: 170 FNGYDYNGRSLVVNKASPK 188
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+F+ N PFD+D+E++ F G V + ++ T +G GF+ TVE A +AV
Sbjct: 111 LFVGNFPFDVDSEKLAMLFGQAGTVEIAEVIYNRQTDLSRGFGFVTMNTVEEAESAVEKF 170
Query: 488 KTTSGLGIFLKGRQLTVLKALDK 510
G GR L V KA K
Sbjct: 171 N-----GYDYNGRSLVVNKASPK 188
>gi|224101041|ref|XP_002312117.1| predicted protein [Populus trichocarpa]
gi|118480981|gb|ABK92444.1| unknown [Populus trichocarpa]
gi|222851937|gb|EEE89484.1| predicted protein [Populus trichocarpa]
Length = 293
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
++ ++F G V VY+ + TG+S+GF FV F K DAE AI K NG + + V+
Sbjct: 227 DLLELFRTFGHVSRVYVAIDQKTGVSRGFGFVNFVSKEDAERAINKLNGYGYDNLILRVE 286
Query: 292 WAVPKN 297
WA P++
Sbjct: 287 WATPRS 292
>gi|78191396|gb|ABB29919.1| unknown [Solanum tuberosum]
Length = 258
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 48/77 (62%)
Query: 217 WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
+ L++ N+ F+ +++ +F G V +V+IP + TG S+GFAFV++ + +A+ A++
Sbjct: 16 YSLLVLNVTFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKYQDEAQKAVE 75
Query: 277 KFNGQKFGKRPIAVDWA 293
K +G+ R I V +A
Sbjct: 76 KLDGRVVDGREIMVRFA 92
>gi|406606952|emb|CCH41674.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Wickerhamomyces ciferrii]
Length = 267
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L IR +PF K EIKD F P+G V + I + GFAFV++ DA+ A+++
Sbjct: 10 RLFIRPLPFDIKEEEIKDFFGPIGEVKEIVI--------NNGFAFVEYNIADDAKRAVEE 61
Query: 278 FNGQKFGKRPIAVDWA 293
NG++F PI + ++
Sbjct: 62 LNGKQFIDAPIEIQFS 77
>gi|289722610|gb|ADD18239.1| U1 small nuclear ribonucleoprotein [Glossina morsitans morsitans]
gi|289743645|gb|ADD20570.1| U1 small nuclear ribonucleoprotein [Glossina morsitans morsitans]
Length = 166
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 217 WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
W L + NI +A+ +EI++ F G + N+++ + TG SKG+A V++ + A +A
Sbjct: 73 WILFVTNIHEEAQEDEIQEKFCDYGDIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKD 132
Query: 277 KFNGQKFGKRPIAVDWAV---PKNIYSS 301
NG + +PI VDW PK + S
Sbjct: 133 NLNGTEIMGQPIQVDWCFVKGPKRVKKS 160
>gi|448878220|gb|AGE46073.1| arginine/serine-rich splicing factor SC26 transcript II [Zea mays]
Length = 129
Score = 58.2 bits (139), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 49/85 (57%)
Query: 209 GEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCK 268
G+ + + L++ N+ F+ +++ +F G V ++YIP + TG +GFAFV++ +
Sbjct: 10 GQPENRESFSLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNYE 69
Query: 269 RDAESAIQKFNGQKFGKRPIAVDWA 293
+A+ AI +G +F R + V +A
Sbjct: 70 DEAQDAIDGLDGMRFDGRALMVQFA 94
>gi|149244172|ref|XP_001526629.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449023|gb|EDK43279.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 510
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 204 ARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFV 263
ARQ G S L I N+ F A + + ++F G V + +P + DT KGF +V
Sbjct: 351 ARQFGDSQSPPSD-TLFIGNLSFNANRDSLFEIFGEYGTVISCRVPTHPDTQQPKGFGYV 409
Query: 264 KFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKN 297
+F+ +A++A++ NG+ RP +D++ P++
Sbjct: 410 QFSSVDEAKAALEALNGEYIENRPCRLDFSTPRD 443
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 9/91 (9%)
Query: 405 LNSSKSKPKSLKQTEGEDELQ---------NTIFICNLPFDLDNEEVKQRFSAFGEVVSF 455
L+ S KP + K G+ Q +T+FI NL F+ + + + + F +G V+S
Sbjct: 333 LDMSTGKPHASKANAGDRARQFGDSQSPPSDTLFIGNLSFNANRDSLFEIFGEYGTVISC 392
Query: 456 VPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
H T++PKG G+++F +V+ A AA+ A
Sbjct: 393 RVPTHPDTQQPKGFGYVQFSSVDEAKAALEA 423
>gi|256070788|ref|XP_002571724.1| serine/arginine rich splicing factor [Schistosoma mansoni]
gi|360043150|emb|CCD78562.1| putative serine/arginine rich splicing factor [Schistosoma mansoni]
Length = 177
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 214 TQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAES 273
+ W L +RN+ +A +I+D F G + N+++ + TG KG+A V++ ++A +
Sbjct: 68 VEGWILFVRNVQEEATEEDIRDKFCEYGDIKNIHLNLDRRTGYLKGYALVEYENFKEAFT 127
Query: 274 AIQKFNGQKFGKRPIAVDWAVPK 296
A++ NG + + I VDWA K
Sbjct: 128 AMEHLNGSELNGQRILVDWAFTK 150
>gi|17508585|ref|NP_493022.1| Protein R09B3.2 [Caenorhabditis elegans]
gi|3879015|emb|CAB03236.1| Protein R09B3.2 [Caenorhabditis elegans]
Length = 83
Score = 57.8 bits (138), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 217 WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
+ + + N PF+ E+ + FS +G + NV I + +TG +GFAF++F + A+ A++
Sbjct: 5 FSVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVE 64
Query: 277 KFNGQKFGKRPIAVDWA 293
+ NG +F RP+ V+ A
Sbjct: 65 QMNGAEFNGRPLRVNLA 81
>gi|67605110|ref|XP_666661.1| cutinase negative acting protein [Cryptosporidium hominis TU502]
gi|54657695|gb|EAL36429.1| cutinase negative acting protein [Cryptosporidium hominis]
Length = 475
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 76/180 (42%), Gaps = 23/180 (12%)
Query: 121 ARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVLYT 180
+R V G L + EE+ L G++ V+ L+ +GC A +
Sbjct: 270 SREVYCGNLPYSCTEEEIRGLFEECGSIERVSV-----------LSDKGC-----AFITF 313
Query: 181 TVKSACASVALLHQKEIKGGTVWAR------QLGGEGSKTQKWKLIIRNIPFKAKVNEIK 234
+ S +Q E KG + Q G S +I+RNIPF + IK
Sbjct: 314 EQEEGAKSAIQWNQTEYKGRMLRINMSADKPQPGSLSSGGYGPSVIVRNIPFSSDDESIK 373
Query: 235 DMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAV 294
F+ G+V V IP +DTG +GFA V+F ++A+ K +G R + ++ A+
Sbjct: 374 SFFNGCGVVKRVSIPRYSDTGKMRGFAMVEFENDEQIQNAL-KLSGTSMNGREVTIEIAL 432
>gi|363752183|ref|XP_003646308.1| hypothetical protein Ecym_4446 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889943|gb|AET39491.1| hypothetical protein Ecym_4446 [Eremothecium cymbalariae
DBVPG#7215]
Length = 855
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 101/230 (43%), Gaps = 24/230 (10%)
Query: 78 VISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQRVARTVIIGGLLN-----A 132
V G + K E+ TV AA L + +D + T I LN
Sbjct: 585 VEDGTTEPEEKFKEAKATVDDVMAANRNETLNEHDDLDTQVHGPTTSIFVKNLNFSTKTE 644
Query: 133 DMAEEVHRLAGSIGTVCSV-TYPLPKEELEQHGLAQEGCKMDASAVLYTTVKSACASVAL 191
D+ ++ AG I V + T P PK + G Q M V + T + A A ++
Sbjct: 645 DLTDKFKSFAGFI--VAQIKTKPDPK----RKGKTQ---SMGFGFVEFRTKEQANAVISA 695
Query: 192 LHQKEIKGGTVWA----RQLGGEGSKTQK----WKLIIRNIPFKAKVNEIKDMFSPVGLV 243
L I G + RQ +KT K K+I++N+PF+A +I ++FS G +
Sbjct: 696 LEGTVIDGHKIQLKLSHRQGTASTAKTSKKNINGKIIVKNLPFEATRKDIFELFSSFGQL 755
Query: 244 WNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWA 293
+V +P D ++GFAFV+F ++AE+A+ + G R + + +A
Sbjct: 756 KSVRVPKKFDKS-ARGFAFVEFLLPKEAENAMDQLEGVHLLGRRLVMQYA 804
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RNI + AK ++ + +F+P G + ++I +T TG SKGFA+V F DA +A +
Sbjct: 314 RLFLRNILYTAKEDDFQQLFAPYGEIEEIHIAVDTRTGQSKGFAYVLFKNPDDAVNAYIE 373
Query: 278 FNGQKFGKRPIAVDWAVPK 296
+ Q F R + + A PK
Sbjct: 374 LDKQIFQGRLLHILPADPK 392
>gi|326436064|gb|EGD81634.1| eukaryotic translation initiation factor 3 subunit G [Salpingoeca
sp. ATCC 50818]
Length = 241
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 49/79 (62%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L I N+P ++++D+ + + V V++ + TG +KGFA+V F ++DA +A++K
Sbjct: 162 LQITNLPPWTTDDDLRDLCNAIAPVRRVFLAKDKRTGDAKGFAYVDFNMRQDAATALEKL 221
Query: 279 NGQKFGKRPIAVDWAVPKN 297
+G ++G ++ +WA P+
Sbjct: 222 DGHRYGPSVLSCEWAKPRR 240
>gi|59802584|gb|AAX07527.1| unknown [Prosthecobacter dejongeii]
Length = 111
Score = 57.8 bits (138), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 45/79 (56%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
K+ + N+PF A +E++ +F+ G V ++++P + TG +GFAFV AI
Sbjct: 6 KMYVGNLPFTAMESELRALFNDYGTVTDMHLPMDHATGRPRGFAFVTMDSAMAMNEAITA 65
Query: 278 FNGQKFGKRPIAVDWAVPK 296
NG+ FG R + ++ A PK
Sbjct: 66 LNGKDFGGRSLTINEARPK 84
>gi|407039238|gb|EKE39532.1| RNA recognition motif domain containing protein [Entamoeba nuttalli
P19]
Length = 697
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL+++N+PF+ + E++++F G + V +P D G +KGFAFV++ K++A +A+
Sbjct: 617 KLLVKNVPFETNIKEVRELFRTYGTLRGVRLPKKVD-GQNKGFAFVEYATKQEAANAMAA 675
Query: 278 FNGQKFGKRPIAVDWA 293
F R + +++A
Sbjct: 676 LKNSHFYGRHLIIEYA 691
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 143/331 (43%), Gaps = 53/331 (16%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
++II+N+P +A +K F G + + + T G S+ F F+ F + A++AI K
Sbjct: 3 RIIIKNLPERADEKILKQQFEKFGGITDCKVMR-TPQGNSRKFGFIGFENEDQAQTAITK 61
Query: 278 FNGQKFGKRPIAVDWA---------VPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDD 328
NG + V A P + YS G
Sbjct: 62 MNGAYIQSSKLQVSLAKAIGDQTIERPWSKYSVG-------------------------- 95
Query: 329 AETASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDS--ALVKGNKE 386
+S SN +++ +P+ E I +K K +S+ L ++++ L G K+
Sbjct: 96 ---SSSFSNDKKRKVIPTK---HETQTIKKK---KDSSSLDELKKMANERRPKLDNGKKK 146
Query: 387 QDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRF 446
+ + +++ + + ++ + + KS+ + + +D + I+I NLPF+ +++++ F
Sbjct: 147 KFDSEEDDQNNQHMEEEEIINEQEHQKSMDEIDVKDWEEGRIYITNLPFNCTEDDIRKEF 206
Query: 447 SAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLK 506
FG + + ++TK+ KG GF+ F + A A + F+KGR + V
Sbjct: 207 DRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKACNEMDNK-----FIKGRIVHVTY 261
Query: 507 ALDKKLAHDKEIDKSKNETNDHRNLYLAKEG 537
A + ++++ +SKN +N AK G
Sbjct: 262 AKADPYS-NQQVGESKNYKEKKQNELKAKAG 291
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 55/136 (40%), Gaps = 15/136 (11%)
Query: 172 MDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLG--------GEGSKTQKWKLIIRN 223
M +L +S VAL I W + G G K +I++N
Sbjct: 316 MKKEEILDVNAESMAVRVALAENYVINQTKKWLEENGVNCTVLENGMKEKRSNNIIIVKN 375
Query: 224 IPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKF 283
I A E+K +F G + +P SK A V+F DA++A ++ ++
Sbjct: 376 IAASAIDLEVKSLFEKFGTLKQFLMPK------SKALALVEFEVANDAKTAFKRLVYSRY 429
Query: 284 GKRPIAVDWAVPKNIY 299
P+ ++WA P+ ++
Sbjct: 430 RGIPLYLEWA-PEKVF 444
>gi|125551738|gb|EAY97447.1| hypothetical protein OsI_19377 [Oryza sativa Indica Group]
Length = 254
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%)
Query: 221 IRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNG 280
+ N+P ++ ++F G +W Y+P G KGF V F R AE A++ N
Sbjct: 177 VNNLPELCPPEQLVELFGRFGPLWMWYVPTRGSGGTCKGFGCVVFQRHRHAEEAVEALNC 236
Query: 281 QKFGKRPIAVDWAVP 295
+FG R + VDWA P
Sbjct: 237 WEFGGRKLRVDWAYP 251
>gi|448878326|gb|AGE46126.1| arginine/serine-rich splicing factor SC31 transcript IV [Sorghum
bicolor]
Length = 273
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%)
Query: 217 WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
+ L++ NI F+ +++ +F G V +V+IP + TG S+GFAFV++ +A+ AI
Sbjct: 16 FSLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAID 75
Query: 277 KFNGQKFGKRPIAVDWA 293
+ +G+ R I V +A
Sbjct: 76 RLDGRNVDGRNIMVQFA 92
>gi|432877330|ref|XP_004073147.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
isoform 2 [Oryzias latipes]
Length = 479
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 48/75 (64%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VGLV + + ++ +TG KG+ F ++ + A SA++
Sbjct: 31 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 90
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 91 NGREFSGRALRVDNA 105
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV 484
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 30 SVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 87
>gi|32564504|ref|NP_495123.2| Protein TIAR-1, isoform e [Caenorhabditis elegans]
gi|373219013|emb|CCD65018.1| Protein TIAR-1, isoform e [Caenorhabditis elegans]
Length = 305
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 61/109 (55%), Gaps = 5/109 (4%)
Query: 191 LLHQKEIKGGTVWARQLGGEGSK---TQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVY 247
LL +E+K WA + G + SK T+ + + + ++ + ++++ F P G V +
Sbjct: 5 LLLDREMK--VNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAK 62
Query: 248 IPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPK 296
+ +T+T SKG+ FV + + +AE AI++ NGQ G+R I +WA K
Sbjct: 63 VIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 111
>gi|373854326|ref|ZP_09597124.1| RNP-1 like RNA-binding protein [Opitutaceae bacterium TAV5]
gi|391231688|ref|ZP_10267894.1| RRM domain-containing RNA-binding protein [Opitutaceae bacterium
TAV1]
gi|372472193|gb|EHP32205.1| RNP-1 like RNA-binding protein [Opitutaceae bacterium TAV5]
gi|391221349|gb|EIP99769.1| RRM domain-containing RNA-binding protein [Opitutaceae bacterium
TAV1]
Length = 122
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL + N+ FK +E++ F G V +VY+ + TG +GFAFV + +A+ A +K
Sbjct: 5 KLYVGNMSFKTSEDELRSAFGQFGNVTDVYVAMDKMTGRPRGFAFVTMSTPEEAKIAAEK 64
Query: 278 FNGQKFGKRPIAVDWAVPK 296
NG G R + V+ A PK
Sbjct: 65 LNGVDLGGRALTVNEARPK 83
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+++ N+ F +E++ F FG V + ++T RP+G F+ T E A ++A
Sbjct: 6 LYVGNMSFKTSEDELRSAFGQFGNVTDVYVAMDKMTGRPRGFAFVTMSTPEEAK--IAAE 63
Query: 488 KTTSGLGIFLKGRQLTVLKALDKK 511
K G+ L GR LTV +A K+
Sbjct: 64 KLN---GVDLGGRALTVNEARPKE 84
>gi|319765042|ref|YP_004128979.1| rnp-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
gi|330827234|ref|YP_004390537.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans K601]
gi|317119603|gb|ADV02092.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
gi|329312606|gb|AEB87021.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans K601]
Length = 144
Score = 57.8 bits (138), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 43/78 (55%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL + N+P+ + +++ F G+V + + DTG SKGF FV+ DA++AI
Sbjct: 4 KLYVGNLPYSVRDQDLEQAFGQFGVVTSAKVMMERDTGRSKGFGFVEMGSDADAQAAING 63
Query: 278 FNGQKFGKRPIAVDWAVP 295
NGQ G R I V+ A P
Sbjct: 64 MNGQSLGGRSIVVNEARP 81
Score = 43.1 bits (100), Expect = 0.49, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 424 LQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAA 483
+ N +++ NLP+ + +++++Q F FG V S ++ + T R KG GF++ + A AA
Sbjct: 1 MGNKLYVGNLPYSVRDQDLEQAFGQFGVVTSAKVMMERDTGRSKGFGFVEMGSDADAQAA 60
Query: 484 VSASKTTSGLGIFLKGRQLTVLKA 507
++ S L GR + V +A
Sbjct: 61 INGMNGQS-----LGGRSIVVNEA 79
>gi|242033301|ref|XP_002464045.1| hypothetical protein SORBIDRAFT_01g011240 [Sorghum bicolor]
gi|241917899|gb|EER91043.1| hypothetical protein SORBIDRAFT_01g011240 [Sorghum bicolor]
Length = 102
Score = 57.8 bits (138), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 216 KWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAI 275
+++ + N+P+ +KD FS G + N + ++ DTG S+GF FV+F K+ ++AI
Sbjct: 17 EYRAFVSNLPYSTNDGSLKDAFSSYGPL-NADVAYDRDTGRSRGFGFVQFDDKKSMDNAI 75
Query: 276 QKFNGQKFGKRPIAVDWA 293
Q NGQ+ G R ++V A
Sbjct: 76 QGMNGQQVGGRTVSVSQA 93
>gi|410976696|ref|XP_003994750.1| PREDICTED: probable RNA-binding protein 19 [Felis catus]
Length = 994
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A EI+++FS G + V +P + TG +GF FV F K+DA+ A
Sbjct: 825 KILVRNIPFQADSREIRELFSTFGELKTVRLPKKMSGTGSHRGFGFVDFLTKQDAKRAFH 884
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 885 ALCHSTHLYGRR-LVLEWA 902
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 406 NSSKSKP-KSLKQTEGEDELQNT--IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQV 462
NS+K P ++L + E E++L ++ +F+ NLP+ E+++Q FS FG + + +
Sbjct: 372 NSAKPWPGRTLGENEEEEDLADSGRLFVRNLPYSSTEEDLEQLFSRFGPLSELHYPIDSL 431
Query: 463 TKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHD 515
TK+PKG F+ F E A A + G +GR L VL + KK A +
Sbjct: 432 TKKPKGFAFVTFMFPEHAVKAYAEVD-----GQVFQGRMLHVLPSTIKKEASE 479
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 149/367 (40%), Gaps = 81/367 (22%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q E SKT ++++N+P E+++ F G + V +P T A V+F
Sbjct: 572 QAAAERSKTV---ILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGVT------AIVEF 622
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGA--------AAGVQNKGDGNSD 317
+A A + K P+ ++WA P ++SS AG +G +
Sbjct: 623 LEPLEARRAFRHLAYSKCRHVPLYLEWA-PVGVFSSSAPQKKEPRDPPAGPAEEGAAEPE 681
Query: 318 SGSDDDL--GDDDAETASDDSNSSEKED---------------LPSNADFDEEVDIARKV 360
+ D++ G+ E ++D+ + E+E+ N +F + ++V
Sbjct: 682 TLPDNETPEGEKPTERGAEDAPAKEEEEEEEEEEEESPPGCTLFIKNLNFTTTEETLKEV 741
Query: 361 LNKL-----------TSTTGSLPSLSDDSALVKGNKEQDSDKTVNE-----------SAK 398
+++ + TG L LS V+ K + + K + + +
Sbjct: 742 FSRVGMVKSCSVSKKKNKTGEL--LSMGFGFVEYRKPEQAQKALKQLQGHIVDGHKLEVR 799
Query: 399 VSDVSK---LNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF 455
+S+ + L S++ K KQT + I + N+PF D+ E+++ FS FGE+ +
Sbjct: 800 ISERATKPALTSARKKQVPRKQT------TSKILVRNIPFQADSREIRELFSTFGELKTV 853
Query: 456 -VPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV--------LK 506
+P T +G GF+ F T + A A A ++ L GR+L + L
Sbjct: 854 RLPKKMSGTGSHRGFGFVDFLTKQDAKRAFHALCHST----HLYGRRLVLEWADSEVSLP 909
Query: 507 ALDKKLA 513
AL +K A
Sbjct: 910 ALRRKTA 916
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+P+ + +++ +FS G + ++ P ++ T KGFAFV F A A +
Sbjct: 396 RLFVRNLPYSSTEEDLEQLFSRFGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAE 455
Query: 278 FNGQKFGKRPIAV 290
+GQ F R + V
Sbjct: 456 VDGQVFQGRMLHV 468
>gi|448878320|gb|AGE46123.1| arginine/serine-rich splicing factor SC31 transcript I [Sorghum
bicolor]
Length = 268
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%)
Query: 217 WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
+ L++ NI F+ +++ +F G V +V+IP + TG S+GFAFV++ +A+ AI
Sbjct: 16 FSLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAID 75
Query: 277 KFNGQKFGKRPIAVDWA 293
+ +G+ R I V +A
Sbjct: 76 RLDGRNVDGRNIMVQFA 92
>gi|449707231|gb|EMD46930.1| RNA recognition domain containing protein [Entamoeba histolytica
KU27]
Length = 685
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL+++N+PF+ + E++++F G + V +P D G +KGFAFV++ K++A +A+
Sbjct: 605 KLLVKNVPFETNIKEVRELFRTYGTLRGVRLPKKVD-GQNKGFAFVEYATKQEAANAMAA 663
Query: 278 FNGQKFGKRPIAVDWA 293
F R + +++A
Sbjct: 664 LKNSHFYGRHLIIEYA 679
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 144/332 (43%), Gaps = 54/332 (16%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
++II+N+P +A +K F G + + + T G S+ F F+ F + A++AI K
Sbjct: 3 RIIIKNLPERADEKILKQQFEKFGGITDCKVMR-TPQGNSRKFGFIGFENEDQAQTAITK 61
Query: 278 FNGQKFGKRPIAVDWA---------VPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDD 328
NG + V A P + YS G
Sbjct: 62 MNGAYIQSSKLQVSLAKAIGDQTIERPWSKYSVG-------------------------- 95
Query: 329 AETASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDS--ALVKGNKE 386
+S SN +++ +P+ E I +K K +S+ L ++++ L G K+
Sbjct: 96 ---SSSFSNDKKRKVIPTK---HETQTIKKK---KDSSSLDELKKIANERKPKLDNGKKK 146
Query: 387 Q-DSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQR 445
+ DS++ + + + ++ + + KS+ + + +D + I+I NLPF+ +++++
Sbjct: 147 KFDSEEDDQNNQHMEEEEEIINEQEHQKSMDEIDVKDWEEGRIYITNLPFNCTEDDIRKE 206
Query: 446 FSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVL 505
F FG + + ++TK+ KG GF+ F + A A + F+KGR + V
Sbjct: 207 FDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKACNEMDNK-----FIKGRIVHVT 261
Query: 506 KALDKKLAHDKEIDKSKNETNDHRNLYLAKEG 537
A + ++++ +SKN +N AK G
Sbjct: 262 YAKADPYS-NQQVGESKNYKEKKQNELKAKAG 292
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 149/382 (39%), Gaps = 55/382 (14%)
Query: 172 MDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLG--------GEGSKTQKWKLIIRN 223
M +L +S VAL I W + G G K +I++N
Sbjct: 317 MKKEEILDVNAESMAVRVALAENYVINQTKKWLEENGVNCTVLENGMKEKRSNNIIIVKN 376
Query: 224 IPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKF 283
I A E+K +F G + +P SK A V+F DA++A ++ ++
Sbjct: 377 IAASAIELEVKSLFEKFGTLKQFLMPK------SKALALVEFEVANDAKTAFKRLVYSRY 430
Query: 284 GKRPIAVDWAVPKNIYSSGGAAAGVQNK-----------GDGNSDSGSDDDLGDDDAETA 332
P+ ++WA P+ ++ ++ + ++D + +
Sbjct: 431 RGIPLYLEWA-PEKVFDEEKVNKKMEEEKLTQEKQSKTIQKEEDTKKKEEDKKKQEEDKI 489
Query: 333 SDDSNSSE------KEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGN-- 384
+ SN +E K N F + D+ RKV K S + D + K +
Sbjct: 490 TTKSNQTELVEEGSKTLYVKNISFKTKEDVIRKVFEKCGRVLAITLSKTKDKKVEKNSGF 549
Query: 385 ------KEQDSDKTVNE-SAKVSDVSKLNSSKSKP-------KSLKQTEGEDELQNTIFI 430
K +D+ + KV D + S+P K K+ E E ++ N + +
Sbjct: 550 GFVEYAKHEDAINAIKTLQGKVIDGHAVQIEISQPKVKDEDHKERKEIE-EHKVSNKLLV 608
Query: 431 CNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTT 490
N+PF+ + +EV++ F +G + V + +V + KG F+++ T + A A++A K +
Sbjct: 609 KNVPFETNIKEVRELFRTYG-TLRGVRLPKKVDGQNKGFAFVEYATKQEAANAMAALKNS 667
Query: 491 SGLGIFLKGRQLTVLKALDKKL 512
GR L + A D +L
Sbjct: 668 H-----FYGRHLIIEYAKDTEL 684
>gi|448878314|gb|AGE46120.1| arginine/serine-rich splicing factor SC30 transcript I [Sorghum
bicolor]
Length = 250
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 47/77 (61%)
Query: 217 WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
+ L++ NI F+ +++ +F G + ++YIP + TG S+GFAFV++ + +A+ A+
Sbjct: 16 YSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVD 75
Query: 277 KFNGQKFGKRPIAVDWA 293
+ +G+ R I V +A
Sbjct: 76 RLDGRLVDGREIMVQFA 92
>gi|320583460|gb|EFW97673.1| nuclear localization sequence binding protein [Ogataea
parapolymorpha DL-1]
Length = 500
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+ F+A + +K+ F G V + IP + ++ KGF +V+F +A++A++
Sbjct: 367 LFVGNLSFQADRDTLKEFFEQHGTVLGIRIPTHPESEQPKGFGYVQFGSVDEAKAALEAL 426
Query: 279 NGQKFGKRPIAVDWAVPKNIYSSGGAAAGV 308
NG+ RP+ +D++ P++ +GG+ G
Sbjct: 427 NGEYIAGRPVRLDFSAPRD--PNGGSRNGT 454
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 11/93 (11%)
Query: 405 LNSSKSKPKSLKQTE---------GEDELQ--NTIFICNLPFDLDNEEVKQRFSAFGEVV 453
L+ S SKP++ Q + G+ Q +T+F+ NL F D + +K+ F G V+
Sbjct: 333 LDMSTSKPQTPSQNQKFQDRAKKYGDTPSQPSDTLFVGNLSFQADRDTLKEFFEQHGTVL 392
Query: 454 SFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
H +++PKG G+++F +V+ A AA+ A
Sbjct: 393 GIRIPTHPESEQPKGFGYVQFGSVDEAKAALEA 425
Score = 39.7 bits (91), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 28/44 (63%)
Query: 253 DTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPK 296
+TG S+G+ +V F K A+ A+++F G++ RPI +D + K
Sbjct: 296 ETGRSRGYGYVDFESKEQAQKALEQFQGREIEGRPINLDMSTSK 339
>gi|226528044|dbj|BAH56564.1| TIA-1-related RNA binding protein [Spodoptera litura]
Length = 388
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 38/64 (59%)
Query: 233 IKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDW 292
++D F+P G + N I + T SKG+AFV F K DAE+AIQ NGQ G R I +W
Sbjct: 112 LRDAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNW 171
Query: 293 AVPK 296
+ K
Sbjct: 172 STRK 175
>gi|120613408|ref|YP_973086.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
gi|120591872|gb|ABM35312.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
Length = 176
Score = 57.8 bits (138), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 43/78 (55%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL + N+P+ + N+++ F G V + + DTG SKGF FV+ +A++AI
Sbjct: 4 KLYVGNLPYSVRDNDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAING 63
Query: 278 FNGQKFGKRPIAVDWAVP 295
NGQ G R I V+ A P
Sbjct: 64 MNGQALGGRSIVVNEARP 81
Score = 43.1 bits (100), Expect = 0.43, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 424 LQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAA 483
+ N +++ NLP+ + + +++Q F FG V S ++ + T R KG GF++ + A AA
Sbjct: 1 MGNKLYVGNLPYSVRDNDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAA 60
Query: 484 VSASKTTSGLGIFLKGRQLTVLKA 507
++ G L GR + V +A
Sbjct: 61 INGMN-----GQALGGRSIVVNEA 79
>gi|225440472|ref|XP_002272361.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G
isoform 1 [Vitis vinifera]
Length = 293
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%)
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
+++++FS G + VY+ + TGLS+GF +V F + DAE AI K NG + + V+
Sbjct: 227 DLRELFSRFGQLTRVYVAIDHKTGLSRGFGYVNFVNREDAERAISKLNGYGYDSLILQVE 286
Query: 292 WAVPK 296
W+ P+
Sbjct: 287 WSTPR 291
>gi|115453135|ref|NP_001050168.1| Os03g0363800 [Oryza sativa Japonica Group]
gi|108708312|gb|ABF96107.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548639|dbj|BAF12082.1| Os03g0363800 [Oryza sativa Japonica Group]
gi|215737124|dbj|BAG96053.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 243
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L++RNI A+ +I+ F G V +VY+P N T +GF FVKF DA A Q+
Sbjct: 63 LLVRNISLTARPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQEL 122
Query: 279 NGQKFGKRPIAVDWA 293
N Q G R I++ +A
Sbjct: 123 NHQVIGGREISIVFA 137
>gi|281354415|gb|EFB29999.1| hypothetical protein PANDA_019778 [Ailuropoda melanoleuca]
Length = 568
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 47/74 (63%)
Query: 220 IIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFN 279
I+ NIP++A ++KD+FS VG V + + ++ +TG KG+ F ++ + A SA++ N
Sbjct: 5 IVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLN 64
Query: 280 GQKFGKRPIAVDWA 293
G++F R + VD A
Sbjct: 65 GREFSGRALRVDNA 78
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 20/125 (16%)
Query: 429 FICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASK 488
+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 5 IVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR--- 61
Query: 489 TTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAAEG 548
L GR+ + +AL +D + +E N L ++E +P E
Sbjct: 62 -------NLNGREFSG-RAL--------RVDNAASEKNKEELKSLGTGAPVIE-SPYGET 104
Query: 549 VSDDD 553
+S +D
Sbjct: 105 ISPED 109
>gi|224121390|ref|XP_002318570.1| predicted protein [Populus trichocarpa]
gi|222859243|gb|EEE96790.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL + I F+ N +K+ F G V I + +TG S+GF FV +T +A SAIQ
Sbjct: 41 KLFVGGISFQTDDNSLKEAFDKYGNVVEARIIMDRETGRSRGFGFVTYTSSEEASSAIQA 100
Query: 278 FNGQKFGKRPIAVDWAVPK 296
+GQ R + V++A +
Sbjct: 101 LDGQDLHGRRVRVNYATER 119
>gi|156085914|ref|XP_001610366.1| translation initiation factor 3 subunit [Babesia bovis T2Bo]
gi|154797619|gb|EDO06798.1| translation initiation factor 3 subunit, putative [Babesia bovis]
Length = 268
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 52/94 (55%)
Query: 204 ARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFV 263
+R+ GG+ + + + N+ + ++ ++FS VG + Y+ + +T SKGFAF+
Sbjct: 170 SRKEGGDRRNFDENTVRVTNLSEDVREKDLVELFSRVGRIHRAYLAKHKETQYSKGFAFI 229
Query: 264 KFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKN 297
+ ++DA +AI K N Q + + V+WA P N
Sbjct: 230 TYATRQDALNAINKLNRQGYDNLLLNVEWAKPPN 263
>gi|147775526|emb|CAN64942.1| hypothetical protein VITISV_043976 [Vitis vinifera]
Length = 311
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%)
Query: 221 IRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNG 280
+RN+ +++++FS G + VY+ + GLS+GF +V F K DAE AI K NG
Sbjct: 220 VRNLSEDTHEADLRELFSRFGPLTRVYVAIDHKFGLSRGFGYVYFVNKEDAERAINKLNG 279
Query: 281 QKFGKRPIAVDWAVPKNIY 299
+ + V+W+ P++++
Sbjct: 280 FGYDSLILQVEWSPPRSLF 298
>gi|326319545|ref|YP_004237217.1| RNP-1 like RNA-binding protein [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323376381|gb|ADX48650.1| RNP-1 like RNA-binding protein [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 172
Score = 57.8 bits (138), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 43/78 (55%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL + N+P+ + N+++ F G V + + DTG SKGF FV+ +A++AI
Sbjct: 4 KLYVGNLPYSVRDNDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAING 63
Query: 278 FNGQKFGKRPIAVDWAVP 295
NGQ G R I V+ A P
Sbjct: 64 MNGQALGGRSIVVNEARP 81
Score = 43.1 bits (100), Expect = 0.44, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 424 LQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAA 483
+ N +++ NLP+ + + +++Q F FG V S ++ + T R KG GF++ + A AA
Sbjct: 1 MGNKLYVGNLPYSVRDNDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAA 60
Query: 484 VSASKTTSGLGIFLKGRQLTVLKA 507
++ G L GR + V +A
Sbjct: 61 INGMN-----GQALGGRSIVVNEA 79
>gi|118918389|ref|NP_001036895.2| TIA1 cytotoxic granule-associated RNA binding protein [Bombyx mori]
gi|111608113|gb|ABH10800.1| nucleolysin TIAR protein [Bombyx mori]
Length = 402
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + ++ + + N +++ F+P G + N I + T SKG+AFV F K DAE+AIQ
Sbjct: 98 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 157
Query: 279 NGQKFGKRPIAVDWAVPK 296
NGQ G R I +W+ K
Sbjct: 158 NGQWLGSRSIRTNWSTRK 175
>gi|428181978|gb|EKX50840.1| hypothetical protein GUITHDRAFT_85230, partial [Guillardia theta
CCMP2712]
Length = 243
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Query: 208 GGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNV-YIPHNTDTGLSKGFAFVKFT 266
G GS+ + + + NIP+ A +++D+F VG V + ++ N+DTG KGF F +F
Sbjct: 3 GSRGSQASR-SVFVGNIPYNATEEQLEDIFRAVGHVVSFRWLVKNSDTGQPKGFGFCEFR 61
Query: 267 CKRDAESAIQKFNGQKFGKRPIAVDWA 293
+ AESAI+ N +F R + +D+A
Sbjct: 62 DAQTAESAIRNLNNTEFNGRLLRIDYA 88
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQV-TKRPKGTGFLKFKTVEAATAAV 484
++F+ N+P++ E+++ F A G VVSF ++ T +PKG GF +F+ + A +A+
Sbjct: 12 SVFVGNIPYNATEEQLEDIFRAVGHVVSFRWLVKNSDTGQPKGFGFCEFRDAQTAESAI 70
>gi|321476727|gb|EFX87687.1| hypothetical protein DAPPUDRAFT_306569 [Daphnia pulex]
Length = 845
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLS-KGFAFVKFTCKRDAESAIQ 276
KL++RNIPF+A E+ ++F P G + V +P S +GFAF+ F K+DA+ A +
Sbjct: 729 KLLVRNIPFEATTKEVTELFKPFGELKAVRLPKKMAGNQSHRGFAFIDFITKQDAKRAFE 788
Query: 277 KFNGQK--FGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 789 SLSASTHLYGRR-LVLEWA 806
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 141/327 (43%), Gaps = 66/327 (20%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
++++N+ ++ V+E++D+FSP G + V +P T A V+F +A++A +K
Sbjct: 502 MLVKNLDAQSNVDELRDLFSPFGELGRVLLPPRGVT------AIVEFLEPTEAKAAFRKL 555
Query: 279 NGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGN----SDSGSDDDLGDDDAETASD 334
KF P+ ++WA P +++ + AA V++K N D+ + L +++ SD
Sbjct: 556 AYSKFRHMPLYLEWA-PMDVFRT--AAQRVESKPSENKTKVKDASAVATLEENNP-ILSD 611
Query: 335 DSNSSEKED---LPSNADF---DEEV-------------DIARKVLNK-----LTSTTGS 370
++D N +F D+ + +ARK K L+ G
Sbjct: 612 KVEEQPEQDTTIFVKNVNFATTDQSMRKHFESCGPIFSATVARKKDPKNPGQFLSMGYGF 671
Query: 371 LPSLSDDSALVKGNKEQDS------------DKTVNESAKVSDVSKLNSSKSKPKSLKQT 418
+ LS + + + Q+S ++T N+ + K S+ +P S K
Sbjct: 672 VQFLSKKATVTALKELQNSTLDGHTIELKRSNRTENKEETIITARKTLSTSKEPISSK-- 729
Query: 419 EGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VPVLHQVTKRPKGTGFLKFKTV 477
+ + N+PF+ +EV + F FGE+ + +P + +G F+ F T
Sbjct: 730 ---------LLVRNIPFEATTKEVTELFKPFGELKAVRLPKKMAGNQSHRGFAFIDFITK 780
Query: 478 EAATAAVSASKTTSGLGIFLKGRQLTV 504
+ A A + ++ L GR+L +
Sbjct: 781 QDAKRAFESLSAST----HLYGRRLVL 803
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Query: 203 WARQ---LGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKG 259
W RQ + E + + ++ IRN+ + A +I+ +FS G + ++P + + KG
Sbjct: 296 WERQENDMKKEETVAESGRIFIRNLAYTATEEDIEALFSRYGPLAETHLPIDKHSRKIKG 355
Query: 260 FAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPK 296
FAFV + A A +G F R + + PK
Sbjct: 356 FAFVTYVIPEHAVRAYTALDGTAFQGRMLHLIAGKPK 392
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
++I++N+P ++K+ FS G V +V + ++ D G + F FV F +A+SA+
Sbjct: 3 RIIVKNLPPSVSAQKLKETFSQKGQVTDVQLKYDKD-GKFRHFGFVGFKNDDEADSALSY 61
Query: 278 FNGQKFGKRPIAVDWAV 294
FN G I V+ V
Sbjct: 62 FNNTFVGSCKIQVERCV 78
>gi|76253771|ref|NP_956408.2| cleavage stimulation factor subunit 2 [Danio rerio]
gi|41107668|gb|AAH65442.1| Cleavage stimulation factor, 3' pre-RNA, subunit 2 [Danio rerio]
Length = 488
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 48/75 (64%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VGLV + + ++ +TG KG+ F ++ + A SA++
Sbjct: 26 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 85
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 86 NGREFSGRALRVDNA 100
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV 484
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 25 SVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 82
>gi|449494063|ref|XP_004159436.1| PREDICTED: polyadenylate-binding protein 3-like [Cucumis sativus]
Length = 652
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 124/282 (43%), Gaps = 34/282 (12%)
Query: 213 KTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAE 272
K+ + I+N+ ++D F+ G V + + +++ G SKG+ FV+F + AE
Sbjct: 119 KSGYANVFIKNLDLSIDNKALRDTFAAFGTVLSCKVAVDSN-GQSKGYGFVQFESEESAE 177
Query: 273 SAIQKFNGQKFGKRPIAVDWAV--PKNIYSSGGAAAGVQNKGDGNSDSGSDDDL------ 324
+I+K NG + + V + + I ++G V K ++ +DDDL
Sbjct: 178 ISIEKLNGMLLNDKQVYVGHFIRHQERIRANGSQFTNVYVK--NLPETTTDDDLKNLFAP 235
Query: 325 -GDDDAETASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKG 383
G + DSN K +F + D A + KL T L DD L G
Sbjct: 236 HGTITSAIVMTDSNGKSK--CFGFVNF-QNTDSAAAAVEKLDGTV-----LGDDKTLYVG 287
Query: 384 NKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVK 443
++ +++ AK K ++ +G + ++I NL +D+E++K
Sbjct: 288 RAQRKAEREAELRAKFEQERK--------SRFEKLQGAN-----LYIKNLDDHIDDEKLK 334
Query: 444 QRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
+ FS +G + S +L Q KG+GF+ F + + AT A++
Sbjct: 335 ELFSEYGTITSCKVMLDQ-HGLSKGSGFVAFSSPDEATKALN 375
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 191 LLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPH 250
LL+ K++ G Q + +Q + ++N+P +++K++F+P G + + +
Sbjct: 187 LLNDKQVYVGHFIRHQERIRANGSQFTNVYVKNLPETTTDDDLKNLFAPHGTITSAIVMT 246
Query: 251 NTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFG 284
+++ G SK F FV F A +A++K +G G
Sbjct: 247 DSN-GKSKCFGFVNFQNTDSAAAAVEKLDGTVLG 279
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 213 KTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAE 272
K Q L I+N+ ++K++FS G + + + + GLSKG FV F+ +A
Sbjct: 313 KLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQH-GLSKGSGFVAFSSPDEAT 371
Query: 273 SAIQKFNGQKFGKRPIAVDWA 293
A+ + NG+ G++P+ V A
Sbjct: 372 KALNEMNGKMKGRKPLYVAVA 392
>gi|297620951|ref|YP_003709088.1| RNA-binding protein [Waddlia chondrophila WSU 86-1044]
gi|297376252|gb|ADI38082.1| RNA-binding protein [Waddlia chondrophila WSU 86-1044]
gi|337293226|emb|CCB91217.1| putative RNA-binding protein rbpA [Waddlia chondrophila 2032/99]
Length = 92
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL + N+ ++ ++ KD F+ G V + I + TG SKGF FV+F K AE AI++
Sbjct: 2 KLYVGNLSYRVSEDQFKDYFASFGEVLSAKIITDRFTGQSKGFGFVEFADKEAAEEAIKE 61
Query: 278 FNGQKFGKRPIAVDWAVP 295
NG F R I V+ A P
Sbjct: 62 LNGSNFEGRSIVVNEAKP 79
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+++ NL + + ++ K F++FGEV+S + + T + KG GF++F EAA A+
Sbjct: 3 LYVGNLSYRVSEDQFKDYFASFGEVLSAKIITDRFTGQSKGFGFVEFADKEAAEEAIKEL 62
Query: 488 KTTSGLGIFLKGRQLTVLKA 507
++ +GR + V +A
Sbjct: 63 NGSN-----FEGRSIVVNEA 77
Score = 39.7 bits (91), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSK 58
++T + + + +GFG+V+FA E A A++ NG++ GR I V A RRSK
Sbjct: 32 IITDRFTGQSKGFGFVEFADKEAAEEAIKELNGSNFEGRSIVVNEAKPMEDRPPRRSK 89
>gi|374586124|ref|ZP_09659216.1| RNP-1 like RNA-binding protein [Leptonema illini DSM 21528]
gi|373874985|gb|EHQ06979.1| RNP-1 like RNA-binding protein [Leptonema illini DSM 21528]
Length = 102
Score = 57.8 bits (138), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 47/77 (61%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + N+PF+A +E++++F+ G V V IP + +TG S+GFAFV+ +A AI
Sbjct: 3 IYVGNLPFRASSDELQNIFAAHGTVARVTIPVDRETGRSRGFAFVEMPNDAEASEAINSL 62
Query: 279 NGQKFGKRPIAVDWAVP 295
NG +F R + V+ A P
Sbjct: 63 NGFEFMGRMLKVNEARP 79
>gi|225156280|ref|ZP_03724758.1| RNP-1 like RNA-binding protein [Diplosphaera colitermitum TAV2]
gi|224803012|gb|EEG21257.1| RNP-1 like RNA-binding protein [Diplosphaera colitermitum TAV2]
Length = 106
Score = 57.8 bits (138), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 47/87 (54%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL + N+ F +++ FS G + +V++ + +TG +GFAFV F +++ A +K
Sbjct: 4 KLYVGNLSFNTSEADLRTAFSTCGTLTDVFLATDRETGRPRGFAFVTFDTAEESQLATEK 63
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGA 304
NG G R I V+ A PK GG+
Sbjct: 64 LNGTDLGGRAITVNEARPKEATGGGGS 90
>gi|67479353|ref|XP_655058.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56472162|gb|EAL49670.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
Length = 685
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL+++N+PF+ + E++++F G + V +P D G +KGFAFV++ K++A +A+
Sbjct: 605 KLLVKNVPFETNIKEVRELFRTYGTLRGVRLPKKVD-GQNKGFAFVEYATKQEAANAMAA 663
Query: 278 FNGQKFGKRPIAVDWA 293
F R + +++A
Sbjct: 664 LKNSHFYGRHLIIEYA 679
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 144/332 (43%), Gaps = 54/332 (16%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
++II+N+P +A +K F G + + + T G S+ F F+ F + A++AI K
Sbjct: 3 RIIIKNLPERADEKILKQQFEKFGGITDCKVMR-TPQGNSRKFGFIGFENEDQAQTAITK 61
Query: 278 FNGQKFGKRPIAVDWA---------VPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDD 328
NG + V A P + YS G
Sbjct: 62 MNGAYIQSSKLQVSLAKAIGDQTIERPWSKYSVG-------------------------- 95
Query: 329 AETASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDS--ALVKGNKE 386
+S SN +++ +P+ E I +K K +S+ L ++++ L G K+
Sbjct: 96 ---SSSFSNDKKRKVIPTK---HETQTIKKK---KDSSSLDELKKIANERKPKLDNGKKK 146
Query: 387 Q-DSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQR 445
+ DS++ + + + ++ + + KS+ + + +D + I+I NLPF+ +++++
Sbjct: 147 KFDSEEDDQNNQHMEEEEEIINEQEHQKSMDEIDVKDWEEGRIYITNLPFNCTEDDIRKE 206
Query: 446 FSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVL 505
F FG + + ++TK+ KG GF+ F + A A + F+KGR + V
Sbjct: 207 FDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKACNEMDNK-----FIKGRIVHVT 261
Query: 506 KALDKKLAHDKEIDKSKNETNDHRNLYLAKEG 537
A + ++++ +SKN +N AK G
Sbjct: 262 YAKADPYS-NQQVGESKNYKEKKQNELKAKAG 292
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 148/382 (38%), Gaps = 55/382 (14%)
Query: 172 MDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLG--------GEGSKTQKWKLIIRN 223
M +L +S VAL I W + G G K +I++N
Sbjct: 317 MKKEEILDVNAESMAVRVALAENYVINQTKKWLEENGVNCTVLENGMKEKCSNNIIIVKN 376
Query: 224 IPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKF 283
I A E+K +F G + +P SK A V+F DA++A ++ ++
Sbjct: 377 IAASAIELEVKSLFEKFGTLKQFLMPK------SKALALVEFEVANDAKTAFKRLVYSRY 430
Query: 284 GKRPIAVDWAVPKNIYSSGGAAAGVQNK-----------GDGNSDSGSDDDLGDDDAETA 332
P+ ++WA P+ ++ ++ + ++D + +
Sbjct: 431 RGIPLYLEWA-PEKVFDEEKVNKKMEEEKLTQEKQSKTIQKEEDTKKKEEDKKKQEEDKI 489
Query: 333 SDDSNSSE------KEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDS-------- 378
+ SN +E K N F + D+ RKV K S + D
Sbjct: 490 TTKSNQTELVEEGSKTLYVKNISFKTKEDVIRKVFEKCGRVLAITLSKTKDKKVEKNSGF 549
Query: 379 ALVKGNKEQDSDKTVNE-SAKVSDVSKLNSSKSKP-------KSLKQTEGEDELQNTIFI 430
V+ K +D+ + KV D + S+P K K+ E E ++ N + +
Sbjct: 550 GFVEYAKHEDAINAIKTLQGKVIDGHAVQIEISQPKVKDEDHKERKEIE-EHKVSNKLLV 608
Query: 431 CNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTT 490
N+PF+ + +EV++ F +G + V + +V + KG F+++ T + A A++A K +
Sbjct: 609 KNVPFETNIKEVRELFRTYG-TLRGVRLPKKVDGQNKGFAFVEYATKQEAANAMAALKNS 667
Query: 491 SGLGIFLKGRQLTVLKALDKKL 512
GR L + A D +L
Sbjct: 668 H-----FYGRHLIIEYAKDTEL 684
>gi|409047364|gb|EKM56843.1| hypothetical protein PHACADRAFT_254184 [Phanerochaete carnosa
HHB-10118-sp]
Length = 287
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 49/86 (56%)
Query: 211 GSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRD 270
GS+ L + NI + N+++D+F G V VY+ + +TG KGFAFV F K
Sbjct: 199 GSRDDLPTLRVTNISEDTQENDLRDLFGAFGRVARVYVGRDRETGAGKGFAFVSFEDKAV 258
Query: 271 AESAIQKFNGQKFGKRPIAVDWAVPK 296
A+ A++K +G+ + ++V W+ P+
Sbjct: 259 AQRAMEKTHGRGYDNLILSVQWSQPR 284
>gi|448878419|gb|AGE46172.1| arginine/serine-rich splicing factor SC37 transcript III
[Physcomitrella patens subsp. patens]
Length = 257
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 48/77 (62%)
Query: 217 WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
+ L++ NI F+ +++ +F G V +++IP + TG S+GFAFV++ +A+ AI+
Sbjct: 16 YSLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRYKYADEAQKAIE 75
Query: 277 KFNGQKFGKRPIAVDWA 293
+ +G++ R I V +A
Sbjct: 76 RLDGREVDGRHIVVQFA 92
>gi|359481742|ref|XP_003632667.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G
isoform 2 [Vitis vinifera]
Length = 286
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%)
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
+++++FS G + VY+ + TGLS+GF +V F + DAE AI K NG + + V+
Sbjct: 220 DLRELFSRFGQLTRVYVAIDHKTGLSRGFGYVNFVNREDAERAISKLNGYGYDSLILQVE 279
Query: 292 WAVPK 296
W+ P+
Sbjct: 280 WSTPR 284
>gi|356511826|ref|XP_003524623.1| PREDICTED: uncharacterized protein LOC100782808 [Glycine max]
Length = 274
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%)
Query: 212 SKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDA 271
S KL I + + +++ FS G V + I + +TG S+GF F+ +T +A
Sbjct: 37 SSAPSTKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEA 96
Query: 272 ESAIQKFNGQKFGKRPIAVDWA 293
SAIQ +GQ RPI V++A
Sbjct: 97 SSAIQALDGQDLHGRPIRVNYA 118
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 37/59 (62%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
+FI + + D + +++ FS +GEVV ++ + T R +G GF+ + +VE A++A+ A
Sbjct: 44 LFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQA 102
>gi|347756146|ref|YP_004863709.1| RNA-binding proteins (RRM domain) [Candidatus Chloracidobacterium
thermophilum B]
gi|347588663|gb|AEP13192.1| RNA-binding proteins (RRM domain) [Candidatus Chloracidobacterium
thermophilum B]
Length = 112
Score = 57.8 bits (138), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 45/79 (56%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL + N+ F+ +++D FS G V + + + DT S+GF FV+FT D AI+
Sbjct: 2 KLYVGNLSFQTTSEDLRDHFSKAGTVESAQVVEDRDTNRSRGFGFVEFTSTEDGNRAIEM 61
Query: 278 FNGQKFGKRPIAVDWAVPK 296
F+G +F R + V+ A P+
Sbjct: 62 FHGTEFNGRTLTVNEARPR 80
Score = 47.8 bits (112), Expect = 0.022, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHR 49
+V + +N RGFG+V+F ED NRA+EM +GT GR + V A R
Sbjct: 32 VVEDRDTNRSRGFGFVEFTSTEDGNRAIEMFHGTEFNGRTLTVNEARPR 80
>gi|270009354|gb|EFA05802.1| hypothetical protein TcasGA2_TC030646 [Tribolium castaneum]
Length = 212
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%)
Query: 208 GGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTC 267
G+ + K KLI+ IP A ++ +F+P+G V ++ I + +TG S GF FVK+
Sbjct: 18 AGDQVECDKSKLIVNYIPQFATEEDLALIFTPIGRVESIKIMRDYNTGYSFGFGFVKYFN 77
Query: 268 KRDAESAIQKFNGQKFGKRPIAVDWAVP 295
+ DA AIQ NG + + + V ++ P
Sbjct: 78 EEDAAKAIQVINGMNYKNKRLKVSYSRP 105
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 391 KTVNESAKVSDVSKLNSSKSKPKSLK----QTEGEDELQNTIFICNLPFDLDNEEVKQRF 446
K NE + +N K K LK + G D + ++I NLP D+ ++V + F
Sbjct: 74 KYFNEEDAAKAIQVINGMNYKNKRLKVSYSRPPGADMKASNLYITNLPKDVTEDDVHRLF 133
Query: 447 SAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
S +GE++ + ++T P+G F++F E A AA++
Sbjct: 134 SNYGEIIQKSVLKDKITGMPRGVAFVRFSRGEEAKAAIA 172
>gi|397629333|gb|EJK69314.1| hypothetical protein THAOC_09441 [Thalassiosira oceanica]
Length = 407
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 69/151 (45%), Gaps = 20/151 (13%)
Query: 179 YTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKW--KLIIRNIPFKAKVNEIKDM 236
Y TVK A A A GT LGG+ + K + IRN+PF A ++I ++
Sbjct: 262 YVTVKEANAPRA---------GTTAGASLGGKARQQPKGCKTVYIRNLPFDATEDQILEV 312
Query: 237 FSPVGLV--WNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFG----KRPIAV 290
F G V + I N TG SKGF + +F + A SA+Q+ + FG KRP+ V
Sbjct: 313 FRTCGKVVEGGIRIARNHVTGQSKGFCYCEFKNEEAAYSAVQRA-AKPFGVTVLKRPVFV 371
Query: 291 DW--AVPKNIYSSGGAAAGVQNKGDGNSDSG 319
D+ K Y SG + GD +G
Sbjct: 372 DYDEGAMKGSYRSGDGKLWSKEYGDRQQQAG 402
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVV--SFVPVLHQVTKRPKGTGFLKFKTVEAATAAV 484
T++I NLPFD +++ + F G+VV + VT + KG + +FK EAA +AV
Sbjct: 294 TVYIRNLPFDATEDQILEVFRTCGKVVEGGIRIARNHVTGQSKGFCYCEFKNEEAAYSAV 353
Query: 485 SASKTTSGLGIF 496
+ G+ +
Sbjct: 354 QRAAKPFGVTVL 365
>gi|326673799|ref|XP_003199996.1| PREDICTED: cleavage stimulation factor subunit 2-like [Danio rerio]
Length = 488
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 48/75 (64%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VGLV + + ++ +TG KG+ F ++ + A SA++
Sbjct: 26 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 85
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 86 NGREFSGRALRVDNA 100
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV 484
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 25 SVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 82
>gi|302795484|ref|XP_002979505.1| hypothetical protein SELMODRAFT_233382 [Selaginella moellendorffii]
gi|300152753|gb|EFJ19394.1| hypothetical protein SELMODRAFT_233382 [Selaginella moellendorffii]
Length = 287
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 55/98 (56%), Gaps = 6/98 (6%)
Query: 205 RQLGGEGSK-TQKWK-----LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSK 258
R GG GSK T +++ L + N+ + +++++F G + +++ + TGL +
Sbjct: 179 RPGGGAGSKETTRYRDDGNSLRVTNLSEDTREADLQELFGRFGSISRIFVASDRGTGLGR 238
Query: 259 GFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPK 296
GFAF+ F + DAE A++K +G + + V+WA P+
Sbjct: 239 GFAFITFVRREDAERAMKKLDGYGYDSLILHVEWAAPR 276
>gi|195612902|gb|ACG28281.1| splicing factor, arginine/serine-rich 2 [Zea mays]
gi|414869216|tpg|DAA47773.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
gi|448878194|gb|AGE46060.1| arginine/serine-rich splicing factor SC32 transcript II [Zea mays]
Length = 248
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%)
Query: 217 WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
+ L++ NI F+ +++ +F G V +V+IP + TG S+GFAFV++ +A+ AI
Sbjct: 16 FSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAID 75
Query: 277 KFNGQKFGKRPIAVDWA 293
+ +G+ R I V +A
Sbjct: 76 RLDGRNVDGRNIMVQFA 92
>gi|449446375|ref|XP_004140947.1| PREDICTED: polyadenylate-binding protein 3-like [Cucumis sativus]
Length = 652
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 124/282 (43%), Gaps = 34/282 (12%)
Query: 213 KTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAE 272
K+ + I+N+ ++D F+ G V + + +++ G SKG+ FV+F + AE
Sbjct: 119 KSGYANVFIKNLDLSIDNKALRDTFAAFGTVLSCKVAVDSN-GQSKGYGFVQFESEESAE 177
Query: 273 SAIQKFNGQKFGKRPIAVDWAV--PKNIYSSGGAAAGVQNKGDGNSDSGSDDDL------ 324
+I+K NG + + V + + I ++G V K ++ +DDDL
Sbjct: 178 ISIEKLNGMLLNDKQVYVGHFIRHQERIRANGSQFTNVYVKNL--PETTTDDDLKNLFAP 235
Query: 325 -GDDDAETASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKG 383
G + DSN K +F + D A + KL T L DD L G
Sbjct: 236 HGTITSAIVMTDSNGKSK--CFGFVNF-QNTDSAAAAVEKLDGTV-----LGDDKTLYVG 287
Query: 384 NKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVK 443
++ +++ AK K ++ +G + ++I NL +D+E++K
Sbjct: 288 RAQRKAEREAELKAKFEQERK--------SRFEKLQGAN-----LYIKNLDDHIDDEKLK 334
Query: 444 QRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
+ FS +G + S +L Q KG+GF+ F + + AT A++
Sbjct: 335 ELFSEYGTITSCKVMLDQ-HGLSKGSGFVAFSSPDEATKALN 375
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 191 LLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPH 250
LL+ K++ G Q + +Q + ++N+P +++K++F+P G + + +
Sbjct: 187 LLNDKQVYVGHFIRHQERIRANGSQFTNVYVKNLPETTTDDDLKNLFAPHGTITSAIVMT 246
Query: 251 NTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFG 284
+++ G SK F FV F A +A++K +G G
Sbjct: 247 DSN-GKSKCFGFVNFQNTDSAAAAVEKLDGTVLG 279
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 213 KTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAE 272
K Q L I+N+ ++K++FS G + + + + GLSKG FV F+ +A
Sbjct: 313 KLQGANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQH-GLSKGSGFVAFSSPDEAT 371
Query: 273 SAIQKFNGQKFGKRPIAVDWA 293
A+ + NG+ G++P+ V A
Sbjct: 372 KALNEMNGKMKGRKPLYVAVA 392
>gi|159164088|pdb|2DGO|A Chain A, Solution Structure Of The Rna Binding Domain In Cytotoxic
Granule-Associated Rna Binding Protein 1
gi|211938969|pdb|2RNE|A Chain A, Solution Structure Of The Second Rna Recognition Motif
(Rrm) Of Tia-1
Length = 115
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
+IK F+P G + + + + TG SKG+ FV F K DAE+AIQ+ GQ G R I +
Sbjct: 31 DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN 90
Query: 292 WAV-----PKNIYSS 301
WA PK+ Y S
Sbjct: 91 WATRKPPAPKSTYES 105
>gi|443917389|gb|ELU38114.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 131
Score = 57.8 bits (138), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 47/78 (60%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+ + ++++D+FS G V VY+ + +TG KG+AFV F K +AE A+QK
Sbjct: 49 LRVTNVSEDTQEDDLRDLFSKFGRVARVYVGRDRETGAGKGYAFVSFEEKANAERAMQKV 108
Query: 279 NGQKFGKRPIAVDWAVPK 296
+G + ++V W+ P+
Sbjct: 109 HGMGYDNLILSVQWSQPR 126
>gi|406926747|gb|EKD62896.1| RNA-binding protein [uncultured bacterium]
Length = 134
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL + N+ + +E++ +F+ G V + + DTG SKGF FV+ + A++AI+K
Sbjct: 4 KLYVGNLSYTVTSDELRKLFAEAGTVVDAVVISFKDTGRSKGFGFVEMETEEAAKAAIEK 63
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAAA 306
FNG G R I V A + SG A A
Sbjct: 64 FNGSDMGGRKIIVSEARAQESSVSGVAPA 92
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 38/61 (62%)
Query: 424 LQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAA 483
+ +++ NL + + ++E+++ F+ G VV V + + T R KG GF++ +T EAA AA
Sbjct: 1 MNKKLYVGNLSYTVTSDELRKLFAEAGTVVDAVVISFKDTGRSKGFGFVEMETEEAAKAA 60
Query: 484 V 484
+
Sbjct: 61 I 61
>gi|156841314|ref|XP_001644031.1| hypothetical protein Kpol_1026p21 [Vanderwaltozyma polyspora DSM
70294]
gi|156114664|gb|EDO16173.1| hypothetical protein Kpol_1026p21 [Vanderwaltozyma polyspora DSM
70294]
Length = 437
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 70/135 (51%), Gaps = 15/135 (11%)
Query: 177 VLYTTVKSACASVALLHQKEIKGGTV-----WARQLGGEGS-KTQKW---------KLII 221
V +++ +A +V +H K+I G + ++ GG G + +K+ L +
Sbjct: 224 VDFSSKSAAERAVKEMHGKQIDGREINCDMSTSKPAGGNGGDRAKKFGDVPSQPSDTLFL 283
Query: 222 RNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQ 281
N+ F A ++I ++FS G + +V +P + +T KGF +V++ DA+SA+ G+
Sbjct: 284 GNLSFNADRDQIYELFSKHGEIISVRLPTHPETEQPKGFGYVQYGNVNDAQSALDALQGE 343
Query: 282 KFGKRPIAVDWAVPK 296
RP+ +D++ PK
Sbjct: 344 YIDNRPVRLDFSTPK 358
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 39/61 (63%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
+T+F+ NL F+ D +++ + FS GE++S H T++PKG G++++ V A +A+
Sbjct: 279 DTLFLGNLSFNADRDQIYELFSKHGEIISVRLPTHPETEQPKGFGYVQYGNVNDAQSALD 338
Query: 486 A 486
A
Sbjct: 339 A 339
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV 484
TIF+ L + +D+E +K F G+V+ + + T R +G G++ F + AA AV
Sbjct: 179 TIFVGRLSWSVDDEWLKNEFEHIGDVIGARVIYERGTDRSRGYGYVDFSSKSAAERAV 236
>gi|302658783|ref|XP_003021091.1| hypothetical protein TRV_04804 [Trichophyton verrucosum HKI 0517]
gi|291184970|gb|EFE40473.1| hypothetical protein TRV_04804 [Trichophyton verrucosum HKI 0517]
Length = 479
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L I NI F A N ++++FS G + + +P + ++G KGF +V+F+ +A +A++
Sbjct: 346 LFIGNISFSADENMVQELFSKYGAIQGIRLPTDPESGRPKGFGYVQFSSVDEARAALEAE 405
Query: 279 NGQKFGKRPIAVDWAVPK 296
+G G R I +D++ P+
Sbjct: 406 HGADLGGRSIRLDFSTPR 423
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHR 49
+ T S +GFGYVQF+ +++A A+E ++G +GGR I + + R
Sbjct: 375 LPTDPESGRPKGFGYVQFSSVDEARAALEAEHGADLGGRSIRLDFSTPR 423
>gi|259648117|dbj|BAI40366.1| TIA-1 homologue [Bombyx mori]
Length = 402
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%)
Query: 229 KVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPI 288
+ N +++ F+P G + N I + T SKG+AFV F K DAE+AIQ NGQ G R I
Sbjct: 108 ETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSI 167
Query: 289 AVDWAVPK 296
+W+ K
Sbjct: 168 RTNWSTRK 175
>gi|391335607|ref|XP_003742181.1| PREDICTED: probable RNA-binding protein 19-like [Metaseiulus
occidentalis]
Length = 836
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 22/144 (15%)
Query: 163 HGLAQEGCKMDASAVLYTTVKSACASVAL---LHQKEIKGGTVWARQLGGEGSKTQKW-- 217
+G Q K DA L S S L + ++E+K G KTQK
Sbjct: 661 YGFVQFKSKQDAMMALKKLQHSTLDSHTLGLKVSRREVKAA--------GVERKTQKLGK 712
Query: 218 ---KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNT---DTGLSKGFAFVKFTCKRDA 271
K+++RN+PF+A EI ++F+ G + V +P D+G +GFAFV+F K DA
Sbjct: 713 ASTKILVRNVPFQANRKEIFELFAVFGELKTVRLPKKMFGGDSGSHRGFAFVEFITKSDA 772
Query: 272 ESAIQKF--NGQKFGKRPIAVDWA 293
+ A + +G+R + ++WA
Sbjct: 773 KRAFDSLCQSTHLYGRR-LVLEWA 795
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 117/262 (44%), Gaps = 35/262 (13%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVG-LVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
L+++N+P K + D+F P +V V +P + T L V+F +DA SA ++
Sbjct: 487 LLVKNLPANTKEITLWDLFDPKKKVVRRVVLPPSGVTAL------VEFAEPQDARSAFKR 540
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDG-NSDSGSDDDLGDDDAETAS--- 333
F +P+ ++WA P N++S A D ++ + D D G ++A+T S
Sbjct: 541 LAYTMFMDQPLYLEWA-PVNVFSRDATADEATRPSDELDTGTAGDGDDGRNEAQTQSVVD 599
Query: 334 --DDSNSSEKED----LPSNADFDEEVDIARKVLNKL------TSTTGSLP-----SLSD 376
+ S E E+ N +F D+ ++ +K T T S P +LS
Sbjct: 600 EVGGAGSEEPEEGSVLFVKNLNFSTTNDVLQRHFSKCATVVQATVATKSDPRQPGKTLSM 659
Query: 377 DSALVKGNKEQDSD---KTVNESAKVSDVSKLNSSKSKPKSL---KQTEGEDELQNTIFI 430
V+ +QD+ K + S S L S+ + K+ ++T+ + I +
Sbjct: 660 GYGFVQFKSKQDAMMALKKLQHSTLDSHTLGLKVSRREVKAAGVERKTQKLGKASTKILV 719
Query: 431 CNLPFDLDNEEVKQRFSAFGEV 452
N+PF + +E+ + F+ FGE+
Sbjct: 720 RNVPFQANRKEIFELFAVFGEL 741
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L IRN+P+ NE++D+F P G + +++ ++ T KGFAFV + A A Q
Sbjct: 301 RLFIRNLPYTTTENELEDLFKPFGPIAELHLSIDSITKKPKGFAFVAYVFPEHAMKAHQA 360
Query: 278 FNGQKFGKRPIAV 290
+ F R + +
Sbjct: 361 LDYTTFHGRLLHI 373
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+FI NLP+ E++ F FG + + +TK+PKG F+ + E A A A
Sbjct: 302 LFIRNLPYTTTENELEDLFKPFGPIAELHLSIDSITKKPKGFAFVAYVFPEHAMKAHQAL 361
Query: 488 KTTSGLGIFLKGRQLTVLKALDKK 511
T+ GR L ++ L K+
Sbjct: 362 DYTT-----FHGRLLHIIPGLAKQ 380
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L ++N P +A N+I+D FS G V +V + T G + F F+ F +AE A +
Sbjct: 4 RLFVKNFPKEATENKIRDFFSSKGTVTDVALKF-TPEGKFRRFGFIGFASSNEAEEAQKY 62
Query: 278 FNGQKFGKRPIAVDWA-------VPKNIYSSGGAA 305
F+ G + V+ + P + YS G A
Sbjct: 63 FDKTFMGTSRLHVEISKELAEKPRPWSKYSEGSTA 97
>gi|293334639|ref|NP_001169755.1| uncharacterized protein LOC100383636 [Zea mays]
gi|224031469|gb|ACN34810.1| unknown [Zea mays]
gi|414887660|tpg|DAA63674.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
gi|414887661|tpg|DAA63675.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
Length = 246
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 48/77 (62%)
Query: 217 WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
+ L++ NI F+ +++ +F G + ++YIP + TG S+GFAFV++ + +A+ A++
Sbjct: 17 YSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVE 76
Query: 277 KFNGQKFGKRPIAVDWA 293
+ +G+ R I V +A
Sbjct: 77 RLDGRLVDGREIMVQFA 93
>gi|242035597|ref|XP_002465193.1| hypothetical protein SORBIDRAFT_01g033710 [Sorghum bicolor]
gi|241919047|gb|EER92191.1| hypothetical protein SORBIDRAFT_01g033710 [Sorghum bicolor]
Length = 216
Score = 57.4 bits (137), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 49/85 (57%)
Query: 209 GEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCK 268
G + L++ N+ F+ +++ +F G V +++IP + TG S+GFAFV++ +
Sbjct: 8 GHPENRDTFSLLVLNVSFRTTADDLFPLFDRYGEVVDIHIPRDRRTGESRGFAFVRYNYE 67
Query: 269 RDAESAIQKFNGQKFGKRPIAVDWA 293
+A+ AI +G +FG R + V +A
Sbjct: 68 DEAQDAIDGLDGMRFGGRALMVQFA 92
>gi|414867083|tpg|DAA45640.1| TPA: hypothetical protein ZEAMMB73_077445 [Zea mays]
gi|448878222|gb|AGE46074.1| arginine/serine-rich splicing factor SC26 transcript III [Zea mays]
Length = 198
Score = 57.4 bits (137), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 49/85 (57%)
Query: 209 GEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCK 268
G+ + + L++ N+ F+ +++ +F G V ++YIP + TG +GFAFV++ +
Sbjct: 8 GQPENRESFSLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNYE 67
Query: 269 RDAESAIQKFNGQKFGKRPIAVDWA 293
+A+ AI +G +F R + V +A
Sbjct: 68 DEAQDAIDGLDGMRFDGRALMVQFA 92
>gi|388579351|gb|EIM19676.1| translation initiation factor 3, RNA-binding subunit [Wallemia sebi
CBS 633.66]
Length = 288
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 50/89 (56%)
Query: 209 GEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCK 268
G S+ + L + N+ ++++++F G V V+I + +T SKGFAFV F +
Sbjct: 199 GGPSRDEYPTLRVTNVSEDTHEDDLRELFRRFGRVQRVFIGRDRETRASKGFAFVSFELR 258
Query: 269 RDAESAIQKFNGQKFGKRPIAVDWAVPKN 297
DAE A++K NG + ++V W+ P++
Sbjct: 259 SDAEKALEKVNGMGYDNLILSVQWSQPRD 287
>gi|37681959|gb|AAQ97857.1| TIA1 cytotoxic granule-associated RNA binding protein [Danio rerio]
gi|160773363|gb|AAI55270.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
Length = 342
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%)
Query: 230 VNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIA 289
++++ F+P G + + + + TG SKG+ F+ F K DAESAIQ+ NGQ G R I
Sbjct: 110 TDDVRAAFAPFGKISDARVVRDLATGKSKGYGFISFINKWDAESAIQQMNGQWLGGRQIR 169
Query: 290 VDWAVPK 296
+WA K
Sbjct: 170 TNWATRK 176
>gi|386766659|ref|NP_001163756.2| CG34354, isoform E [Drosophila melanogaster]
gi|386766661|ref|NP_001163755.2| CG34354, isoform D [Drosophila melanogaster]
gi|383292995|gb|ACZ95050.2| CG34354, isoform E [Drosophila melanogaster]
gi|383292996|gb|ACZ95049.2| CG34354, isoform D [Drosophila melanogaster]
Length = 431
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%)
Query: 207 LGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFT 266
L G SK +++ + + ++ + + ++KD F+P G + + + + T SKG+ FV F
Sbjct: 86 LVGNNSKPEQFHIFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFV 145
Query: 267 CKRDAESAIQKFNGQKFGKRPIAVDWA 293
K +AE+AI NGQ G R I +WA
Sbjct: 146 KKSEAETAITAMNGQWLGSRSIRTNWA 172
>gi|225543108|ref|NP_001139415.1| sex lethal [Tribolium castaneum]
Length = 218
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%)
Query: 209 GEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCK 268
G+ + K KLI+ IP A ++ +F+P+G V ++ I + +TG S GF FVK+ +
Sbjct: 19 GDQVECDKSKLIVNYIPQFATEEDLALIFTPIGRVESIKIMRDYNTGYSFGFGFVKYFNE 78
Query: 269 RDAESAIQKFNGQKFGKRPIAVDWAVP 295
DA AIQ NG + + + V ++ P
Sbjct: 79 EDAAKAIQVINGMNYKNKRLKVSYSRP 105
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 391 KTVNESAKVSDVSKLNSSKSKPKSLK----QTEGEDELQNTIFICNLPFDLDNEEVKQRF 446
K NE + +N K K LK + G D + ++I NLP D+ ++V + F
Sbjct: 74 KYFNEEDAAKAIQVINGMNYKNKRLKVSYSRPPGADMKASNLYITNLPKDVTEDDVHRLF 133
Query: 447 SAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
S +GE++ + ++T P+G F++F E A AA++
Sbjct: 134 SNYGEIIQKSVLKDKITGMPRGVAFVRFSRGEEAKAAIA 172
>gi|146422677|ref|XP_001487274.1| hypothetical protein PGUG_00651 [Meyerozyma guilliermondii ATCC
6260]
Length = 876
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 19/149 (12%)
Query: 193 HQKEIKGGTVWARQLGGEGSKTQKW-KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN 251
H+ ++K Q G SKT K K+II+N+PF+A ++ ++F G + +V +P
Sbjct: 727 HKLQLKLSHRQGGQSKGGASKTNKTNKIIIKNLPFEATRKDVLELFGAFGQLKSVRVPKK 786
Query: 252 TDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWA-----------------V 294
D ++GFAFV+F ++AE+A+ + G R + + +A V
Sbjct: 787 FDKS-ARGFAFVEFVLLKEAENAMDQLEGVHLLGRRLVMQYAEKDAEDAEAEIAKMTKKV 845
Query: 295 PKNIYSSGGAAAGVQNKGDGNSDSGSDDD 323
+ + AAA + KG N D DD+
Sbjct: 846 KNQVATQELAAARLAGKGKRNIDLDEDDE 874
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RNI + + E + +F G + V+I +T TG SKGF +V+F +DA A +
Sbjct: 350 RLFVRNILYTSTEEEFRTLFQKYGSLEEVHIAVDTRTGKSKGFVYVQFKQPKDAVEAYKS 409
Query: 278 FNGQKFGKRPIAV 290
+ Q F R + +
Sbjct: 410 LDKQIFQGRLLHI 422
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
N I I NLPF+ ++V + F AFG++ S V V + K +G F++F ++ A A+
Sbjct: 752 NKIIIKNLPFEATRKDVLELFGAFGQLKS-VRVPKKFDKSARGFAFVEFVLLKEAENAMD 810
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSK 522
+ G+ L GR+L + A +K A D E + +K
Sbjct: 811 QLE-----GVHLLGRRLVMQYA--EKDAEDAEAEIAK 840
>gi|383847362|ref|XP_003699323.1| PREDICTED: probable RNA-binding protein 19-like [Megachile
rotundata]
Length = 886
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 137/328 (41%), Gaps = 50/328 (15%)
Query: 212 SKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDA 271
SK K L+++N+P V EI+ +F+P G + V +P + T L V+F +A
Sbjct: 530 SKRSKTVLLVKNLPAATTVREIRQLFAPHGELGRVVMPPSGVTAL------VEFLEPSEA 583
Query: 272 ESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAET 331
A K KF P+ ++WA P N +++ A+ V+ + + ++ AE
Sbjct: 584 RKAFSKLAYTKFKHLPLYLEWA-PDNSFTAPAKASDVKPEQKTEKKIEQKNLKVEESAEN 642
Query: 332 ASD-----DSNSSEKEDLPSNADFDEEVDIA--RKVLNKLTSTTGSLP------------ 372
D + + E+E P F + ++ A + L+ S G L
Sbjct: 643 VKDENKEKEESEEEEESEPDTTLFVKNINFATTEEQLHSYFSKCGPLSYASIATKKDVKN 702
Query: 373 ---SLSDDSALVKGNKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGED------- 422
LS V+ ++ D+D+ + KV ++ L+ + K ++T D
Sbjct: 703 PGGKLSMGYGFVRYKRKADADRAL----KVLQMTVLDGKTLELKRSERTLTTDVTNAKKT 758
Query: 423 -----ELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VPVLHQVTKRPKGTGFLKFKT 476
+ I I N+PF + E+ + F AFGE+ + +P ++ +G GF+++ T
Sbjct: 759 SKVTEQTGTKILIRNVPFQANVHEITELFKAFGELKAVRLPRKLVGVEKHRGFGFVEYYT 818
Query: 477 VEAATAAVSASKTTSGLGIFLKGRQLTV 504
A A A G L GR+L +
Sbjct: 819 KGEAKKAFKA----LGQSTHLYGRRLVL 842
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 49/81 (60%), Gaps = 8/81 (9%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSK--GFAFVKFTCKRDAESAI 275
K++IRN+PF+A V+EI ++F G + V +P G+ K GF FV++ K +A+ A
Sbjct: 768 KILIRNVPFQANVHEITELFKAFGELKAVRLPRKL-VGVEKHRGFGFVEYYTKGEAKKAF 826
Query: 276 QKFNGQK---FGKRPIAVDWA 293
+ GQ +G+R + ++WA
Sbjct: 827 KAL-GQSTHLYGRR-LVLEWA 845
>gi|193648018|ref|XP_001950341.1| PREDICTED: nucleolysin TIAR-like [Acyrthosiphon pisum]
Length = 388
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 4/108 (3%)
Query: 191 LLHQKEIKGGTVWARQLGGEG--SKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYI 248
L KE+K WA G + + + + + ++ + + + +K+ F+P G + N I
Sbjct: 70 LFLDKEMK--VNWATTPGNQPKLDTSNHYHIFVGDLSPEIETHTLKEAFAPFGEISNCRI 127
Query: 249 PHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPK 296
+ T SKG+AFV F K DAE+AI NGQ G R I +W+ K
Sbjct: 128 VRDPQTLKSKGYAFVSFVKKSDAENAINSMNGQWLGSRSIRTNWSTRK 175
>gi|340709557|ref|XP_003393372.1| PREDICTED: RNA-binding protein 8A-like [Bombus terrestris]
gi|350401131|ref|XP_003486057.1| PREDICTED: RNA-binding protein 8A-like [Bombus impatiens]
gi|383852814|ref|XP_003701920.1| PREDICTED: RNA-binding protein 8A-like [Megachile rotundata]
Length = 166
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 217 WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
W L I ++ +A+ ++I+D FS G + N+++ + TG KG+A V++ ++A++A
Sbjct: 74 WILFINSVHEEAQEDDIQDKFSEFGQIKNLHLNLDRRTGFLKGYALVEYETFKEAQAAKD 133
Query: 277 KFNGQKFGKRPIAVDWAV---PKNI 298
NG + +PI+VDW PK I
Sbjct: 134 ALNGTEILGQPISVDWCFVKGPKKI 158
>gi|357440093|ref|XP_003590324.1| 33 kDa ribonucleoprotein [Medicago truncatula]
gi|355479372|gb|AES60575.1| 33 kDa ribonucleoprotein [Medicago truncatula]
Length = 311
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 201 TVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGF 260
T+ L E TQ +L + N+PF +++ +F G V +V I ++ T S+GF
Sbjct: 92 TLLNSDLNQEAESTQSRRLFVGNLPFSLSSSQLAQLFGEAGNVVSVEILYDDITNRSRGF 151
Query: 261 AFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWA-VP 295
AFV DAE AI+ F+G G R I V++ VP
Sbjct: 152 AFVTMGNVEDAEEAIRMFDGTTVGGRAIKVNFPEVP 187
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%)
Query: 419 EGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVE 478
E E +F+ NLPF L + ++ Q F G VVS + +T R +G F+ VE
Sbjct: 101 EAESTQSRRLFVGNLPFSLSSSQLAQLFGEAGNVVSVEILYDDITNRSRGFAFVTMGNVE 160
Query: 479 AATAAV 484
A A+
Sbjct: 161 DAEEAI 166
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 7 SNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV 43
+N RGF +V +EDA A+ M +GT+VGGR I V
Sbjct: 145 TNRSRGFAFVTMGNVEDAEEAIRMFDGTTVGGRAIKV 181
>gi|340377347|ref|XP_003387191.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
G-like [Amphimedon queenslandica]
Length = 288
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%)
Query: 221 IRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNG 280
+ N+ A+ ++++++F G + V++ + T SKGFAF+ F+ K DA+SAI NG
Sbjct: 210 VTNLSEDARESDLRELFGRFGPIQRVFLAKDRKTQQSKGFAFIHFSSKEDAQSAITNLNG 269
Query: 281 QKFGKRPIAVDWAVPKN 297
+ + V+WA P N
Sbjct: 270 FGYDHLILKVEWAKPSN 286
>gi|300120416|emb|CBK19970.2| unnamed protein product [Blastocystis hominis]
Length = 639
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 78/171 (45%), Gaps = 22/171 (12%)
Query: 138 VHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVLYTTVKSACASVALLHQKEI 197
V +L S+ + S+T P K + E M +Y T A ++ L K +
Sbjct: 462 VRKLFNSVPGLKSITLPKKKTP------SGESLPMGFGFAVYETRAQALRALNQLSGKAL 515
Query: 198 KGG-------------TVWARQLGGEGSK--TQKWKLIIRNIPFKAKVNEIKDMFSPVGL 242
G T R+L + ++ KL++RN+PF+A +E++++F G
Sbjct: 516 DGHVLDLSFSARSEIVTTKKRKLTARAEEDGEKRTKLLVRNVPFEASRSELRELFGSFGQ 575
Query: 243 VWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWA 293
+ ++ P D G S+GFAFV++ DA++AI+ R + V++A
Sbjct: 576 LKSLRQPKKFD-GTSRGFAFVEYVSSDDAKTAIKALASTHLLGRKLVVEYA 625
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L ++NIP+ K E+++ S G + +V+IP N+ SKG+AFV F A +AI+K
Sbjct: 108 RLFLQNIPYSCKEEELREFISQYGEIVDVFIPLNSKRE-SKGYAFVTFMFPEQAIAAIEK 166
Query: 278 FNGQKFGKRPIAVDWA 293
+G F R + V+ A
Sbjct: 167 LDGSVFQGRVLRVNVA 182
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 61/124 (49%), Gaps = 12/124 (9%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
++++N+P+ A +E+ +FS G V + +P S A V F+ +A+ A +
Sbjct: 294 ILVKNLPYTADRDELLSLFSQYGEVQQLVLPE------SHVMALVTFSVPSEAKRAFNRL 347
Query: 279 NGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDDSNS 338
+ +K+ P+ +++ +P I + A +K D S S + + ++DD+N
Sbjct: 348 SYRKYQHTPLYLEY-LPIAIGQQRRSQAAADSKNDNASKS-----MAAPSKQPSADDNNG 401
Query: 339 SEKE 342
++KE
Sbjct: 402 NDKE 405
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVS-FVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
+F+ N+P+ EE+++ S +GE+V F+P+ + KG F+ F E A AA+
Sbjct: 109 LFLQNIPYSCKEEELREFISQYGEIVDVFIPL--NSKRESKGYAFVTFMFPEQAIAAIEK 166
Query: 487 SKTTSGLGIFLKGRQLTV 504
G +GR L V
Sbjct: 167 LD-----GSVFQGRVLRV 179
>gi|10801574|dbj|BAB16700.1| TIA-1 like protein [Bombyx mori]
Length = 285
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%)
Query: 229 KVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPI 288
+ N +++ F+P G + N I + T SKG+AFV F K DAE+AIQ NGQ G R I
Sbjct: 108 ETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSI 167
Query: 289 AVDWAVPK 296
+W+ K
Sbjct: 168 RTNWSTRK 175
>gi|449018258|dbj|BAM81660.1| similar to nucleolar RNA-binding protein [Cyanidioschyzon merolae
strain 10D]
Length = 406
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 32/198 (16%)
Query: 120 VARTVIIGGL-LNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVL 178
V R +++ G L D +VH Y P++ EQ + DA+A
Sbjct: 115 VERALLLNGTPLETDDGSQVH-------MRVDRCYLAPQKMREQRTTRADTGTGDAAAPS 167
Query: 179 YTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFS 238
YT+ + A +A H+ I I N+PF A EI+ +FS
Sbjct: 168 YTSPDALSAKIAWDHRHSI----------------------FIGNVPFTANEEEIRSVFS 205
Query: 239 PVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPK-- 296
G + NV I + TG+ KGFA+V F + + + A+ + + R + V+ +V +
Sbjct: 206 DCGAILNVRIVRDAQTGMGKGFAYVTFAPEANMDLALSRHETVQLHGRLLRVERSVERLA 265
Query: 297 NIYSSGGAAAGVQNKGDG 314
N + G N G+G
Sbjct: 266 NRRAQHGKTDSRSNAGNG 283
>gi|168016725|ref|XP_001760899.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687908|gb|EDQ74288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 155
Score = 57.4 bits (137), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL + + + + IK+ FS G V V I + DTG S+GF FV F +DAE+A+Q
Sbjct: 43 KLFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFATDQDAEAALQA 102
Query: 278 FNGQKFGKRPIAVDWAV---PKNIYSSGG 303
+G+ R I V++A P++ S GG
Sbjct: 103 LDGRDLAGRTIRVNYATKQSPQDRQSGGG 131
Score = 41.6 bits (96), Expect = 1.5, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
+F+ L + ++ +K+ FSAFGEV + + T R +G GF+ F T + A AA+ A
Sbjct: 44 LFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFATDQDAEAALQA 102
>gi|431914230|gb|ELK15488.1| Putative RNA-binding protein 19 [Pteropus alecto]
Length = 949
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A EI+++FS G + V +P TG +GF FV F K+DA+ A
Sbjct: 835 KILVRNIPFQADRREIRELFSTFGELKTVRLPKKMAGTGTHRGFGFVDFLSKQDAKRAFN 894
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 895 ALCHSTHLYGRR-LVLEWA 912
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 150/358 (41%), Gaps = 64/358 (17%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q E SKT ++++N+P E++++F G + V +P T A V+F
Sbjct: 583 QAAAERSKTV---MLVKNLPAGTLAAELQEIFGQFGSLGRVLLPEGGVT------AIVEF 633
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAA--------AGVQNKGDGNSD 317
+A A + KF P+ ++WA P ++SS A A V+ +
Sbjct: 634 LEPLEARKAFRHLAYSKFHHVPLYLEWA-PMGVFSSSAPAPQKEEPQYALVEAAEKVEPE 692
Query: 318 SGSDDDL--GDDDAETASDDSNS--------SEKEDLPS------NADFDEEVDIARKVL 361
+ D + G+ E A++DS++ E+E LP N +FD + + V
Sbjct: 693 TVLDGETPEGEKPTEGAAEDSSAKMEEEEEDEEEEGLPGCTLFIKNLNFDTTEETLKGVF 752
Query: 362 NKLTSTTGSLPS---------LSDDSALVKGNKEQDSDKTVNE-SAKVSDVSKL----NS 407
+K+ S LS V+ K + + K + + V D KL +
Sbjct: 753 SKVGVVKSCSISRKKNKAGVMLSMGFGFVEYRKPEQAQKALKQLQGHVVDSHKLEVRISE 812
Query: 408 SKSKP---KSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VPVLHQVT 463
+KP + K+ + + I + N+PF D E+++ FS FGE+ + +P T
Sbjct: 813 RATKPALTSTRKKQVARKQTTSKILVRNIPFQADRREIRELFSTFGELKTVRLPKKMAGT 872
Query: 464 KRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV--------LKALDKKLA 513
+G GF+ F + + A A +A ++ L GR+L + L+AL +K A
Sbjct: 873 GTHRGFGFVDFLSKQDAKRAFNALCHST----HLYGRRLVLEWADSEVSLQALRRKTA 926
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 61/113 (53%), Gaps = 8/113 (7%)
Query: 406 NSSKS-KPKSLKQTEGEDELQNT--IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQV 462
NS+K+ + ++L + E E++L ++ +F+ NLP+ E++++ FS +G + + +
Sbjct: 383 NSTKAWQGRTLGENEEEEDLADSGRLFVRNLPYTSSEEDLEKIFSRYGPLSELHYPIDSL 442
Query: 463 TKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHD 515
TK+PKG F+ F E A A + G +GR L VL + KK A +
Sbjct: 443 TKKPKGFAFVTFMFPEHAVKAYAEVD-----GQVFQGRMLHVLPSTIKKGASE 490
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+P+ + +++ +FS G + ++ P ++ T KGFAFV F A A +
Sbjct: 407 RLFVRNLPYTSSEEDLEKIFSRYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAE 466
Query: 278 FNGQKFGKRPIAV 290
+GQ F R + V
Sbjct: 467 VDGQVFQGRMLHV 479
>gi|427792715|gb|JAA61809.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 841
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 9/90 (10%)
Query: 207 LGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDT-GLSKGFAFVKF 265
+G EG+K +++RNIPF+A E++D+FS G + + +P G +GF FV+F
Sbjct: 707 IGKEGTK-----ILVRNIPFQANQKEVQDLFSVFGTLRGIRLPRKMAAGGRHRGFGFVEF 761
Query: 266 TCKRDAESAIQKF--NGQKFGKRPIAVDWA 293
K DA+ A + + +G+R + ++WA
Sbjct: 762 LTKNDAKRAFEALCQSTHLYGRR-LVLEWA 790
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 19/128 (14%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSF-VPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
I + N+PF + +EV+ FS FG + +P R +G GF++F T A A A
Sbjct: 714 ILVRNIPFQANQKEVQDLFSVFGTLRGIRLPRKMAAGGRHRGFGFVEFLTKNDAKRAFEA 773
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
++ L GR+L L+ D+E+D + +T DH L G P++
Sbjct: 774 LCQST----HLYGRRLV----LEWASTDDQEVDTLRKKTADH----------FLRGGPSS 815
Query: 547 EGVSDDDM 554
+ + D+
Sbjct: 816 KRLKKSDL 823
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 66/152 (43%), Gaps = 16/152 (10%)
Query: 371 LPSLSDDSALVKGNKEQDSDKTVNE-----SAKVSDVSKLNSSKSKPKSLKQTEGEDELQ 425
LP A + KEQD + +N+ + DV+K K +Q E Q
Sbjct: 233 LPPKVRGIAYLGFKKEQDMKQALNKHHSFMAGHRLDVTKYAKQVVPEKKWRQFEDLGNPQ 292
Query: 426 NT------IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEA 479
T IFI NL + + EE+++ F +G + + +VT++PKG F+ F E
Sbjct: 293 ETLADTGRIFIRNLSYTITEEELEELFKKYGPLEEVHLSIDRVTRKPKGFAFVSFLFPEH 352
Query: 480 ATAAVSASKTTSGLGIFLKGRQLTVLKALDKK 511
A A T G L+GR L +L A KK
Sbjct: 353 AIRAF-----TELDGQMLQGRLLHLLPAKAKK 379
>gi|318042980|ref|ZP_07974936.1| RNA recognition motif-containing protein [Synechococcus sp. CB0101]
Length = 176
Score = 57.4 bits (137), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 44/77 (57%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + N+PF+A+ ++ ++F+P G V N ++P DTG +GFAFV+ + AI
Sbjct: 3 IFVGNLPFRAEQEDVAELFAPFGEVTNCFLPLERDTGRKRGFAFVELADEDSESRAIDAL 62
Query: 279 NGQKFGKRPIAVDWAVP 295
G + RP+ ++ A P
Sbjct: 63 QGAELMGRPLRINKAEP 79
Score = 44.3 bits (103), Expect = 0.24, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
+IF+ NLPF + E+V + F+ FGEV + L + T R +G F++ ++ + A+ A
Sbjct: 2 SIFVGNLPFRAEQEDVAELFAPFGEVTNCFLPLERDTGRKRGFAFVELADEDSESRAIDA 61
Query: 487 SKTTSGLGIFLKGRQLTVLKA 507
+ G L GR L + KA
Sbjct: 62 LQ-----GAELMGRPLRINKA 77
>gi|226288637|gb|EEH44149.1| eukaryotic translation initiation factor 3 subunit G
[Paracoccidioides brasiliensis Pb18]
Length = 288
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 198 KGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLS 257
KGG ++GG+ + L + N+ A+ EI+DMF G V V++ + +T ++
Sbjct: 189 KGGAAAGERMGGKYERDDLATLRVTNVSELAEEQEIRDMFERFGRVTRVFLAKDRETNMA 248
Query: 258 KGFAFVKFTCKRDAESAIQKFNGQKFGKR 286
KGFAF+ F + DA A +K +G FG R
Sbjct: 249 KGFAFISFQDRSDAARACEKMDG--FGYR 275
>gi|414867082|tpg|DAA45639.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 216
Score = 57.4 bits (137), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 49/85 (57%)
Query: 209 GEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCK 268
G+ + + L++ N+ F+ +++ +F G V ++YIP + TG +GFAFV++ +
Sbjct: 8 GQPENRESFSLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNYE 67
Query: 269 RDAESAIQKFNGQKFGKRPIAVDWA 293
+A+ AI +G +F R + V +A
Sbjct: 68 DEAQDAIDGLDGMRFDGRALMVQFA 92
>gi|47226530|emb|CAG08546.1| unnamed protein product [Tetraodon nigroviridis]
Length = 944
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
KL++RNIPF+A V E++++F G + V +P TG +GF F+ F K+DA+ A
Sbjct: 848 KLLVRNIPFQASVRELRELFCTFGELKTVRLPKKAAGTGNHRGFGFIDFVTKQDAKKAFD 907
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 908 ALCHSTHLYGRR-LVLEWA 925
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 41/69 (59%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+P+ E+K++F+ G + ++ P ++ T SKGFAF+ + +A +A+ +
Sbjct: 416 RLFVRNLPYTCTEEELKELFTKHGPLSEMHFPIDSLTKKSKGFAFITYMIPENAVAALAQ 475
Query: 278 FNGQKFGKR 286
+G F R
Sbjct: 476 LDGHIFQGR 484
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+F+ NLP+ EE+K+ F+ G + + +TK+ KG F+ + E A AA++
Sbjct: 417 LFVRNLPYTCTEEELKELFTKHGPLSEMHFPIDSLTKKSKGFAFITYMIPENAVAALAQL 476
Query: 488 KTTSGLGIFLKGRQLTVLKALDKK 511
G +GR L +L + KK
Sbjct: 477 D-----GHIFQGRMLHLLPSTIKK 495
>gi|388566786|ref|ZP_10153228.1| RNA recognition motif-containing protein [Hydrogenophaga sp. PBC]
gi|388265964|gb|EIK91512.1| RNA recognition motif-containing protein [Hydrogenophaga sp. PBC]
Length = 133
Score = 57.4 bits (137), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 44/78 (56%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL + N+P+ + +++ FS G V + + +TG SKGF FV+ +A+SAIQ
Sbjct: 4 KLYVGNLPYTVRDEDLQQAFSAFGAVNSAKVMMERETGRSKGFGFVEMGSDSEAQSAIQG 63
Query: 278 FNGQKFGKRPIAVDWAVP 295
NGQ G R + V+ A P
Sbjct: 64 MNGQSLGGRSLVVNEARP 81
Score = 47.8 bits (112), Expect = 0.020, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
Query: 424 LQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAA 483
+ N +++ NLP+ + +E+++Q FSAFG V S ++ + T R KG GF++ + A +A
Sbjct: 1 MGNKLYVGNLPYTVRDEDLQQAFSAFGAVNSAKVMMERETGRSKGFGFVEMGSDSEAQSA 60
Query: 484 VSASKTTSGLGIFLKGRQLTVLKA 507
+ S L GR L V +A
Sbjct: 61 IQGMNGQS-----LGGRSLVVNEA 79
>gi|190344798|gb|EDK36553.2| hypothetical protein PGUG_00651 [Meyerozyma guilliermondii ATCC
6260]
Length = 876
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 19/149 (12%)
Query: 193 HQKEIKGGTVWARQLGGEGSKTQKW-KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN 251
H+ ++K Q G SKT K K+II+N+PF+A ++ ++F G + +V +P
Sbjct: 727 HKLQLKLSHRQGGQSKGGASKTNKTNKIIIKNLPFEATRKDVLELFGAFGQLKSVRVPKK 786
Query: 252 TDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWA-----------------V 294
D ++GFAFV+F ++AE+A+ + G R + + +A V
Sbjct: 787 FDKS-ARGFAFVEFVLLKEAENAMDQLEGVHLLGRRLVMQYAEKDAEDAEAEIAKMTKKV 845
Query: 295 PKNIYSSGGAAAGVQNKGDGNSDSGSDDD 323
+ + AAA + KG N D DD+
Sbjct: 846 KNQVATQELAAARLAGKGKRNIDLDEDDE 874
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RNI + + E + +F G + V+I +T TG SKGF +V+F +DA A +
Sbjct: 350 RLFVRNILYTSTEEEFRTLFQKYGSLEEVHIAVDTRTGKSKGFVYVQFKQPKDAVEAYKS 409
Query: 278 FNGQKFGKRPIAV 290
+ Q F R + +
Sbjct: 410 LDKQIFQGRLLHI 422
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
N I I NLPF+ ++V + F AFG++ S V V + K +G F++F ++ A A+
Sbjct: 752 NKIIIKNLPFEATRKDVLELFGAFGQLKS-VRVPKKFDKSARGFAFVEFVLLKEAENAMD 810
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSK 522
+ G+ L GR+L + A +K A D E + +K
Sbjct: 811 QLE-----GVHLLGRRLVMQYA--EKDAEDAEAEIAK 840
>gi|21388662|dbj|BAC00787.1| glycine-rich RNA-binding protein [Physcomitrella patens]
Length = 155
Score = 57.4 bits (137), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL + + + + IK+ FS G V V I + DTG S+GF FV F +DAE+A+Q
Sbjct: 43 KLFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFATDQDAEAALQA 102
Query: 278 FNGQKFGKRPIAVDWAV---PKNIYSSGG 303
+G+ R I V++A P++ S GG
Sbjct: 103 LDGRDLAGRTIRVNYATKQSPQDRQSGGG 131
Score = 41.6 bits (96), Expect = 1.6, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
+F+ L + ++ +K+ FSAFGEV + + T R +G GF+ F T + A AA+ A
Sbjct: 44 LFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFATDQDAEAALQA 102
>gi|320585738|gb|EFW98417.1| eukaryotic translation initiation factor 3 subunit [Grosmannia
clavigera kw1407]
Length = 311
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+ A+ E++DMF G V V++ + DTGL+KGFAFV F + DAE A +K
Sbjct: 233 LRVTNVSELAEEQELRDMFERFGRVTRVFLAKDRDTGLAKGFAFVSFADRTDAEKACEKM 292
Query: 279 NGQKFGKRPIAVDWA 293
G F + V++A
Sbjct: 293 EGFGFKHLILRVEFA 307
>gi|237841019|ref|XP_002369807.1| RNA recognition motif-containing protein [Toxoplasma gondii ME49]
gi|211967471|gb|EEB02667.1| RNA recognition motif-containing protein [Toxoplasma gondii ME49]
Length = 997
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 213 KTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAE 272
+ Q K+++RN+ F+A ++++ +FS G V V IP + G S+GF FV F K++A+
Sbjct: 907 QAQSNKVLVRNLAFQASASDLRGLFSAYGNVTRVCIPRQHE-GRSRGFGFVDFATKQEAQ 965
Query: 273 SAIQKFNGQK-FGKRPI 288
+A++ G +G+R +
Sbjct: 966 NAVEALTGSHLYGRRLV 982
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L+I+N+PF V+E++ + G V ++ + +T +GF FV F A +++ +
Sbjct: 325 RLLIQNLPFATTVDELRALCEEYGEVAETHLVVDEETQRPRGFGFVSFVFPEHAVASLPR 384
Query: 278 FNGQKFGKRPIAVDWAVP 295
NG F R + A P
Sbjct: 385 LNGSIFQGRILRAFPARP 402
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV 484
+ I NLPF +E++ +GEV V+ + T+RP+G GF+ F E A A++
Sbjct: 326 LLIQNLPFATTVDELRALCEEYGEVAETHLVVDEETQRPRGFGFVSFVFPEHAVASL 382
>gi|291228918|ref|XP_002734426.1| PREDICTED: cleavage stimulation factor subunit 2-like [Saccoglossus
kowalevskii]
Length = 220
Score = 57.4 bits (137), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 414 SLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLK 473
++ Q+ D ++F+ N+P++ E++K FS G VVSF V + T +PKG GF +
Sbjct: 3 AVGQSAATDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCE 62
Query: 474 FKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKK 511
+K E A+SA + SG L GRQL V A +K
Sbjct: 63 YKDQE---TALSAMRNLSGYE--LNGRQLRVDNAASEK 95
Score = 48.5 bits (114), Expect = 0.013, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 45/75 (60%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VG V + + ++ +TG KG+ F ++ + A SA++
Sbjct: 17 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYKDQETALSAMRNL 76
Query: 279 NGQKFGKRPIAVDWA 293
+G + R + VD A
Sbjct: 77 SGYELNGRQLRVDNA 91
>gi|161078704|ref|NP_001097953.1| CG34354, isoform A [Drosophila melanogaster]
gi|158030423|gb|ABW08789.1| CG34354, isoform A [Drosophila melanogaster]
Length = 525
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%)
Query: 207 LGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFT 266
L G SK +++ + + ++ + + ++KD F+P G + + + + T SKG+ FV F
Sbjct: 86 LVGNNSKPEQFHIFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFV 145
Query: 267 CKRDAESAIQKFNGQKFGKRPIAVDWA 293
K +AE+AI NGQ G R I +WA
Sbjct: 146 KKSEAETAITAMNGQWLGSRSIRTNWA 172
>gi|443897539|dbj|GAC74879.1| translation initiation factor 3, subunit g [Pseudozyma antarctica
T-34]
Length = 308
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 206 QLGGEG--SKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFV 263
++GG G S+ L + N+ A ++++++F G V VY+ + +TG+ KG+AFV
Sbjct: 212 KMGGLGGVSRDDLPTLRVTNLSEDADDDDLRELFGRFGRVVRVYVGRDRETGICKGYAFV 271
Query: 264 KFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPK 296
F + DA+ A QK +G+ + ++ W++P+
Sbjct: 272 SFETREDADRARQKVDGRGYDNLILSCQWSLPR 304
>gi|255726770|ref|XP_002548311.1| hypothetical protein CTRG_02608 [Candida tropicalis MYA-3404]
gi|240134235|gb|EER33790.1| hypothetical protein CTRG_02608 [Candida tropicalis MYA-3404]
Length = 265
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGL-VWNVYIPHNTDTGLSK------GFAFVKFTCKRD 270
++ + N+ FKA E+K++F GL V +V IP +T K GFAFV+F K D
Sbjct: 16 RIYVGNVDFKATEEEVKELFK--GLNVTDVEIPFKENTRGDKTYKRHLGFAFVQFGSKED 73
Query: 271 AESAIQKFNGQKFGKRPIAVDWAVP 295
A+ AI FNGQKF +R I + AVP
Sbjct: 74 ADKAIVDFNGQKFQRRNIFIRKAVP 98
>gi|221483682|gb|EEE21994.1| RNA recognition motif-containing protein, putative [Toxoplasma
gondii GT1]
Length = 997
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 213 KTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAE 272
+ Q K+++RN+ F+A ++++ +FS G V V IP + G S+GF FV F K++A+
Sbjct: 907 QAQSNKVLVRNLAFQASASDLRGLFSAYGNVTRVCIPRQHE-GRSRGFGFVDFATKQEAQ 965
Query: 273 SAIQKFNGQK-FGKRPI 288
+A++ G +G+R +
Sbjct: 966 NAVEALTGSHLYGRRLV 982
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L+I+N+PF V+E++ + G V ++ + +T +GF FV F A +++ +
Sbjct: 325 RLLIQNLPFATTVDELRALCEEYGEVAETHLVVDEETQRPRGFGFVSFVFPEHAVASLPR 384
Query: 278 FNGQKFGKRPIAVDWAVP 295
NG F R + A P
Sbjct: 385 LNGSIFQGRILRAFPARP 402
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV 484
+ I NLPF +E++ +GEV V+ + T+RP+G GF+ F E A A++
Sbjct: 326 LLIQNLPFATTVDELRALCEEYGEVAETHLVVDEETQRPRGFGFVSFVFPEHAVASL 382
>gi|395324282|gb|EJF56725.1| translation initiation factor 3, RNA-binding subunit [Dichomitus
squalens LYAD-421 SS1]
Length = 290
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 48/86 (55%)
Query: 211 GSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRD 270
GS+ L + NI + N+++D+F G V VY+ + +TG KGFAFV F K
Sbjct: 202 GSRDDLPTLRVTNISEDTQENDLRDLFGGFGRVARVYVGRDRETGAGKGFAFVSFEEKAV 261
Query: 271 AESAIQKFNGQKFGKRPIAVDWAVPK 296
A+ A++K +G+ + + + W+ P+
Sbjct: 262 AQKAMEKMHGRGYDNLILNIQWSQPR 287
>gi|449462067|ref|XP_004148763.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like [Cucumis
sativus]
Length = 282
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 215 QKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESA 274
QK KL I N+P+ V +IK++F G V +V I + G S+GFAFV +A++A
Sbjct: 86 QKRKLYIFNLPWSLSVVDIKELFGQCGTVSDVEIIKQKN-GRSRGFAFVTMASPDEAQAA 144
Query: 275 IQKFNGQKFGKRPIAVDWA 293
IQKF+ Q+ R I V++A
Sbjct: 145 IQKFDSQEISGRVIKVEFA 163
>gi|66558056|ref|XP_395245.2| PREDICTED: RNA-binding protein 8A [Apis mellifera]
gi|380027468|ref|XP_003697445.1| PREDICTED: RNA-binding protein 8A-like [Apis florea]
Length = 166
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 209 GEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCK 268
G + W L I ++ +A+ ++I+D FS G + N+++ + TG KG+A V++
Sbjct: 66 GPQRSVEGWILFINSVHEEAQEDDIQDKFSEFGQIKNLHLNLDRRTGFLKGYALVEYETF 125
Query: 269 RDAESAIQKFNGQKFGKRPIAVDWAV---PKNI 298
++A++A NG + +PI+VDW PK I
Sbjct: 126 KEAQAAKDALNGTEILGQPISVDWCFVKGPKKI 158
>gi|414869214|tpg|DAA47771.1| TPA: hypothetical protein ZEAMMB73_478975 [Zea mays]
Length = 254
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%)
Query: 217 WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
+ L++ NI F+ +++ +F G V +V+IP + TG S+GFAFV++ +A+ AI
Sbjct: 16 FSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAID 75
Query: 277 KFNGQKFGKRPIAVDWA 293
+ +G+ R I V +A
Sbjct: 76 RLDGRNVDGRNIMVQFA 92
>gi|296086175|emb|CBI31616.3| unnamed protein product [Vitis vinifera]
Length = 193
Score = 57.0 bits (136), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 221 IRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNG 280
+ N+ + ++ ++F G V VY+ + TG+S+GF FV F K DAE AI K NG
Sbjct: 116 VTNLSEDTREPDLHELFRTFGPVSRVYVAIDQKTGMSRGFGFVNFVNKEDAERAINKLNG 175
Query: 281 QKFGKRPIAVDWAVPK 296
+ + V+WA P+
Sbjct: 176 YGYDNLILRVEWATPR 191
>gi|297746000|emb|CBI16056.3| unnamed protein product [Vitis vinifera]
Length = 193
Score = 57.0 bits (136), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 221 IRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNG 280
+ N+ + ++ ++F G V VY+ + TG+S+GF FV F K DAE AI K NG
Sbjct: 116 VTNLSEDTREPDLHELFRTFGPVSRVYVAVDQKTGMSRGFGFVNFVNKEDAERAINKLNG 175
Query: 281 QKFGKRPIAVDWAVPKN 297
+ + V+WA P++
Sbjct: 176 YGYDNLILRVEWATPRS 192
>gi|449515273|ref|XP_004164674.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 288
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 215 QKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESA 274
QK KL I N+P+ V +IK++F G V +V I + G S+GFAFV +A++A
Sbjct: 92 QKRKLYIFNLPWSLSVVDIKELFGQCGTVSDVEIIKQKN-GRSRGFAFVTMASPDEAQAA 150
Query: 275 IQKFNGQKFGKRPIAVDWA 293
IQKF+ Q+ R I V++A
Sbjct: 151 IQKFDSQEISGRVIKVEFA 169
>gi|317419577|emb|CBN81614.1| Splicing factor, arginine/serine-rich 2 [Dicentrarchus labrax]
Length = 228
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+ ++ ++ +F G V +VYIP + T S+GFAFV+F KRDAE A+
Sbjct: 16 LKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFLDKRDAEDAMDAM 75
Query: 279 NGQKFGKRPIAVDWA----VPKNIYSSGGAA 305
+G R + V A P ++YS GA
Sbjct: 76 DGALLDGRELRVQMARYGRPPDSMYSRRGAP 106
>gi|359806697|ref|NP_001241034.1| uncharacterized protein LOC100799124 [Glycine max]
gi|255645259|gb|ACU23127.1| unknown [Glycine max]
Length = 275
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%)
Query: 212 SKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDA 271
S KL I + + +++ FS G V + I + +TG S+GF F+ +T +A
Sbjct: 37 SSAPSTKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEA 96
Query: 272 ESAIQKFNGQKFGKRPIAVDWA 293
SAIQ +GQ RPI V++A
Sbjct: 97 SSAIQALDGQDLHGRPIRVNYA 118
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 37/59 (62%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
+FI + + D + +++ FS +GEVV ++ + T R +G GF+ + +VE A++A+ A
Sbjct: 44 LFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQA 102
>gi|170055835|ref|XP_001863758.1| nucleolysin tia-1 [Culex quinquefasciatus]
gi|167875726|gb|EDS39109.1| nucleolysin tia-1 [Culex quinquefasciatus]
Length = 456
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 9/127 (7%)
Query: 177 VLYTTVKSACASVA-----LLHQKEIKGGTVWARQLGGEGSK--TQKWKLIIRNIPFKAK 229
+ Y + +SA ++A L +KEIK WA G + +Q + + ++ + +
Sbjct: 51 IEYASHQSAQTALAAMNKRLFLKKEIK--VNWATSPGNQPKTDTSQHHHIFVGDLSPEIE 108
Query: 230 VNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIA 289
+++ F+P G + N I + T SKG+AFV F K +AE+AIQ NGQ G R I
Sbjct: 109 TETLREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIQMMNGQWLGSRSIR 168
Query: 290 VDWAVPK 296
+W+ K
Sbjct: 169 TNWSTRK 175
>gi|82541152|ref|XP_724838.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23479626|gb|EAA16403.1| FCA gamma-related [Plasmodium yoelii yoelii]
Length = 387
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL I ++P IKDMFS G V V+I + TGL KG +FVKF K A AI
Sbjct: 186 KLFIGSLPKNITEESIKDMFSVYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAISS 245
Query: 278 FNGQKF---GKRPIAVDWAVPK 296
NG+K RP+ V +A PK
Sbjct: 246 LNGKKTLEGCNRPVEVRFAEPK 267
>gi|390354769|ref|XP_003728404.1| PREDICTED: probable RNA-binding protein 19-like [Strongylocentrotus
purpuratus]
Length = 384
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN-TDTGLSKGFAFVKFTCKRDAESAIQ 276
K+++RNIPF+A EI+++F G V V +P + TG +GF FV F K+DA+ A
Sbjct: 265 KILVRNIPFEASSREIRELFITFGEVKTVRLPKKMSGTGSHRGFGFVDFLSKQDAKRAFD 324
Query: 277 KF--NGQKFGKRPIAVDWA 293
+ +G+R + ++WA
Sbjct: 325 SLCHSSHLYGRR-LVLEWA 342
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 144/341 (42%), Gaps = 51/341 (14%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+++N+P E++++FS G++ V +P T + V+F +A +A +
Sbjct: 38 FLVKNLPASTTPEELREVFSQHGMLGRVLMPPAGVTSI------VEFLEPTEARAAFYQL 91
Query: 279 NGQKFGKRPIAVDWAVPKNIYSSG----GAAAGVQNKGDGNSDSGSDDDLGDDDAETASD 334
KF P+ ++WA P +++ + V+ + + + + E+ SD
Sbjct: 92 AYTKFKHVPLYLEWA-PMDVFGTSIKSLEKTPAVEETKEEKKEELEEVRKEEPQEESESD 150
Query: 335 DSNSSEKED--LPSNADFDEEVDIARKVLNKL-------------TSTTGSLPSLSDDSA 379
D + ++ N +F + I +K K T G L LS
Sbjct: 151 DEHQVQEGSVLFVKNLNFSTDESILKKAFKKCGSIRNVTIARKKDTKNQGEL--LSMGYG 208
Query: 380 LVKGNKEQDSDKTVNE-----------SAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTI 428
++ K + + K + E K+S+ S + + +S S K+ + + ++ I
Sbjct: 209 FIEFEKPEWAQKALKEYQHVEVEGHNVELKISNRSTVQTQQSS--SRKKQKAKKQMSTKI 266
Query: 429 FICNLPFDLDNEEVKQRFSAFGEVVSF-VPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+ N+PF+ + E+++ F FGEV + +P T +G GF+ F + + A A +
Sbjct: 267 LVRNIPFEASSREIRELFITFGEVKTVRLPKKMSGTGSHRGFGFVDFLSKQDAKRAFDSL 326
Query: 488 KTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDH 528
+S L GR+L + A ++ +++ + +T DH
Sbjct: 327 CHSSH----LYGRRLVLEWA-----ESEQSVEQLRKKTADH 358
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 6 GSNEHRGFGYVQFAVMEDANRAVE-MKNGTSVGGRKIGVKHAMHRASLEQRRSK 58
G+ HRGFG+V F +DA RA + + + + + GR++ ++ A S+EQ R K
Sbjct: 301 GTGSHRGFGFVDFLSKQDAKRAFDSLCHSSHLYGRRLVLEWAESEQSVEQLRKK 354
>gi|308322103|gb|ADO28189.1| eukaryotic translation initiation factor 3 subunit g [Ictalurus
furcatus]
Length = 294
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + N+P + +++++F P G + +Y+ + +TG SKGFAF+ F + DA AI
Sbjct: 215 IRVTNLPEDTRETDLQELFRPFGSISRIYLAKDKNTGQSKGFAFISFHRREDAARAIAGV 274
Query: 279 NGQKFGKRPIAVDWAVPKN 297
+G + + V+WA P N
Sbjct: 275 SGFGYDHLILNVEWAKPSN 293
>gi|226533870|gb|ACO71288.1| cp31BHv [Triticum aestivum]
Length = 170
Score = 57.0 bits (136), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 64/122 (52%), Gaps = 8/122 (6%)
Query: 177 VLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQK--------WKLIIRNIPFKA 228
V +T++ A ++ ++ +I G + + GS+ ++ ++ + N+P++A
Sbjct: 49 VTMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQA 108
Query: 229 KVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPI 288
+ + + +FS G V N + ++ +TG S+GF FV K D +SAI +GQ+ RP+
Sbjct: 109 EDSRLVQLFSEHGEVVNATVVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 168
Query: 289 AV 290
V
Sbjct: 169 RV 170
Score = 42.7 bits (99), Expect = 0.62, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 42/82 (51%)
Query: 215 QKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESA 274
++ K+ + N+P+ + +F G+V + +N ++G S+GF FV + +A+ A
Sbjct: 1 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 60
Query: 275 IQKFNGQKFGKRPIAVDWAVPK 296
I+ FN R + V+ A +
Sbjct: 61 IETFNRYDISGRLLNVNRAAQR 82
Score = 41.2 bits (95), Expect = 2.0, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQR 55
++ + S + RGFG+V + +E+A++A+E N + GR + V A R S +R
Sbjct: 34 VIYNRESGQSRGFGFVTMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVER 88
>gi|47228429|emb|CAG05249.1| unnamed protein product [Tetraodon nigroviridis]
Length = 411
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 4/118 (3%)
Query: 183 KSACASVALLHQKEIKGGTV---WARQLGGEGSKTQ-KWKLIIRNIPFKAKVNEIKDMFS 238
+ A A++A ++ ++I G V WA + T + + + ++ + ++IK F
Sbjct: 48 RHATATIAAMNGRKILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFG 107
Query: 239 PVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPK 296
P G + + + + TG SKG+ FV F K DAE+AIQ+ GQ G R I +WA K
Sbjct: 108 PFGKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRK 165
>gi|119620231|gb|EAW99825.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_c [Homo sapiens]
Length = 144
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
+IK F+P G + + + + TG SKG+ FV F K DAE+AIQ+ GQ G R I +
Sbjct: 45 DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN 104
Query: 292 WAV-----PKNIYSS 301
WA PK+ Y S
Sbjct: 105 WATRKPPAPKSTYES 119
>gi|115476996|ref|NP_001062094.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|42408182|dbj|BAD09319.1| putative splicing factor, arginine/serine-rich [Oryza sativa
Japonica Group]
gi|113624063|dbj|BAF24008.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|215693774|dbj|BAG88973.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737273|dbj|BAG96202.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 289
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%)
Query: 217 WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
+ L++ NI F+ +++ +F G V +V+IP + TG S+GFAFV++ +A+ AI
Sbjct: 16 FSLLVLNISFRTTADDLFPLFDRYGKVVDVFIPRDRRTGDSRGFAFVRYKYAEEAQKAID 75
Query: 277 KFNGQKFGKRPIAVDWA 293
+ +G+ R I V +A
Sbjct: 76 RLDGRNVDGRNIMVQFA 92
Score = 38.9 bits (89), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 7 SNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQ-RRSKVTQEVQ 64
+ + RGF +V++ E+A +A++ +G +V GR I V+ A + + E R+ ++ +EV+
Sbjct: 53 TGDSRGFAFVRYKYAEEAQKAIDRLDGRNVDGRNIMVQFAKYGPNAEPIRKGRIIEEVE 111
>gi|41055734|ref|NP_956476.1| TIA1 cytotoxic granule-associated RNA binding protein 1 [Danio
rerio]
gi|28277744|gb|AAH45485.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
gi|44890544|gb|AAH66734.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
Length = 342
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%)
Query: 230 VNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIA 289
++++ F+P G + + + + TG SKG+ F+ F K DAESAIQ+ NGQ G R I
Sbjct: 110 TDDVRAAFAPFGKISDARVVKDLATGKSKGYGFISFINKWDAESAIQQMNGQWLGGRQIR 169
Query: 290 VDWAVPK 296
+WA K
Sbjct: 170 TNWATRK 176
>gi|402587151|gb|EJW81087.1| hypothetical protein WUBG_08006 [Wuchereria bancrofti]
Length = 334
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NI ++ ++K +FS VG V ++ + H+ DTG KG+ F ++ + AESAI+
Sbjct: 28 VFVGNISYEVGEEQLKQVFSQVGAVVHLRLVHDRDTGKPKGYGFCEYNDAQTAESAIRNL 87
Query: 279 NGQKFGKRPIAVDWA 293
NG + RP+ VD A
Sbjct: 88 NGFELNGRPLRVDSA 102
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 422 DELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAAT 481
D ++F+ N+ +++ E++KQ FS G VV V + T +PKG GF ++ + A
Sbjct: 22 DRSARSVFVGNISYEVGEEQLKQVFSQVGAVVHLRLVHDRDTGKPKGYGFCEYNDAQTAE 81
Query: 482 AAVSASKTTSGLGIFLKGRQLTV 504
+A+ G L GR L V
Sbjct: 82 SAIRNLN-----GFELNGRPLRV 99
>gi|195621804|gb|ACG32732.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 260
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%)
Query: 217 WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
+ L++ NI F+ +++ +F G V +V+IP + TG S+GFAFV++ +A+ AI
Sbjct: 16 FSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAID 75
Query: 277 KFNGQKFGKRPIAVDWA 293
+ +G+ R I V +A
Sbjct: 76 RLDGRNVDGRNIMVQFA 92
>gi|212274649|ref|NP_001130287.1| uncharacterized protein LOC100191381 [Zea mays]
gi|194688754|gb|ACF78461.1| unknown [Zea mays]
gi|414870130|tpg|DAA48687.1| TPA: ribonucleoprotein [Zea mays]
Length = 289
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 65/125 (52%), Gaps = 8/125 (6%)
Query: 177 VLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQK--------WKLIIRNIPFKA 228
V +T++ A ++ + ++ +I G + + G++ ++ ++ + N+P++A
Sbjct: 157 VTMSTIEEADKAIEMFNRYDISGRLLNVNRASPRGTRMERPPRQFAPAFRAYVGNLPWQA 216
Query: 229 KVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPI 288
+ + +FS G V N + ++ +TG S+GF FV K + + AI +GQ+ RP+
Sbjct: 217 DDSRLVQLFSEYGEVVNAAVVYDRETGRSRGFGFVTMVSKEELDDAISALDGQELDGRPL 276
Query: 289 AVDWA 293
V+ A
Sbjct: 277 RVNVA 281
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
K+ + N+P+ + + +F G+V + +N +TG S+GF FV + +A+ AI+
Sbjct: 112 KVYVGNLPYDIESEGLAQLFDQAGVVEVAEVIYNKETGQSRGFGFVTMSTIEEADKAIEM 171
Query: 278 FNGQKFGKRPIAVDWAVPK 296
FN R + V+ A P+
Sbjct: 172 FNRYDISGRLLNVNRASPR 190
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 17/155 (10%)
Query: 354 VDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTVNESAKVSDVSK--LNSSKSK 411
V++A + NK T + V + +++DK + E D+S LN +++
Sbjct: 137 VEVAEVIYNKETGQSRGF-------GFVTMSTIEEADKAI-EMFNRYDISGRLLNVNRAS 188
Query: 412 PKSLKQTEGEDELQNTI--FICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGT 469
P+ + + ++ NLP+ D+ + Q FS +GEVV+ V + T R +G
Sbjct: 189 PRGTRMERPPRQFAPAFRAYVGNLPWQADDSRLVQLFSEYGEVVNAAVVYDRETGRSRGF 248
Query: 470 GFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV 504
GF+ + E A+SA G L GR L V
Sbjct: 249 GFVTMVSKEELDDAISALD-----GQELDGRPLRV 278
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSK 58
++ K + + RGFG+V + +E+A++A+EM N + GR + V A R + +R +
Sbjct: 142 VIYNKETGQSRGFGFVTMSTIEEADKAIEMFNRYDISGRLLNVNRASPRGTRMERPPR 199
>gi|126275158|ref|XP_001386803.1| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|126212672|gb|EAZ62780.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 838
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 69/125 (55%), Gaps = 9/125 (7%)
Query: 177 VLYTTVKSACASVALLHQKEIKGGTV---WARQLGGE--GSKTQKW---KLIIRNIPFKA 228
V + T + A A+++ L ++G + + + GG GSKT K K+II+N+PF+A
Sbjct: 665 VEFRTKEQANAAISALDGHVLEGHKLQLKLSHRQGGSSAGSKTSKSGSNKIIIKNLPFEA 724
Query: 229 KVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPI 288
+I ++F G + +V +P D ++GFAFV+F ++AE+A+ + G R +
Sbjct: 725 TRKDILELFGAFGQLKSVRVPKKFDKS-ARGFAFVEFNLLKEAENAMNQLEGVHLLGRRL 783
Query: 289 AVDWA 293
+ +A
Sbjct: 784 VMQYA 788
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L IRNI + + E +D+F G + V+I +T TG SKGF +V+F DA A +
Sbjct: 309 RLFIRNILYTSTEAEFRDLFEQYGPLQEVHIAVDTRTGKSKGFVYVQFENSSDAVQAYEA 368
Query: 278 FNGQKFGKRPIAV 290
+ Q F R + +
Sbjct: 369 LDKQIFQGRLLHI 381
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 6/95 (6%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
N I I NLPF+ +++ + F AFG++ S V V + K +G F++F ++ A A++
Sbjct: 713 NKIIIKNLPFEATRKDILELFGAFGQLKS-VRVPKKFDKSARGFAFVEFNLLKEAENAMN 771
Query: 486 ASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDK 520
+ G+ L GR+L + A + + EI+K
Sbjct: 772 QLE-----GVHLLGRRLVMQYAEQDSESAEAEIEK 801
>gi|294896462|ref|XP_002775569.1| RNA recognition motif containing protein, putative [Perkinsus
marinus ATCC 50983]
gi|239881792|gb|EER07385.1| RNA recognition motif containing protein, putative [Perkinsus
marinus ATCC 50983]
Length = 361
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV 484
++F+ N+P+D+D E++K FS G VVSF + +VT RPKG GF ++ E A AA+
Sbjct: 10 SVFVGNVPYDVDEEQLKSIFSTVGPVVSFRLMHDKVTGRPKGYGFCEYADQETAYAAM 67
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + N+P+ ++K +FS VG V + + H+ TG KG+ F ++ + A +A++
Sbjct: 11 VFVGNVPYDVDEEQLKSIFSTVGPVVSFRLMHDKVTGRPKGYGFCEYADQETAYAAMRNL 70
Query: 279 NGQKFGKRPIAVDWA 293
N + G RP+ VDWA
Sbjct: 71 NNVECGGRPLRVDWA 85
>gi|295671551|ref|XP_002796322.1| eukaryotic translation initiation factor 3 RNA-binding subunit
[Paracoccidioides sp. 'lutzii' Pb01]
gi|226283302|gb|EEH38868.1| eukaryotic translation initiation factor 3 RNA-binding subunit
[Paracoccidioides sp. 'lutzii' Pb01]
Length = 288
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 198 KGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLS 257
KGG ++GG+ + L + N+ A+ EI+DMF G V V++ + +T ++
Sbjct: 189 KGGAAAGERMGGKYERDDLATLRVTNVSELAEEQEIRDMFERFGRVTRVFLAKDRETNMA 248
Query: 258 KGFAFVKFTCKRDAESAIQKFNGQKFGKR 286
KGFAF+ F + DA A +K +G FG R
Sbjct: 249 KGFAFISFQDRSDAARACEKMDG--FGYR 275
>gi|225681498|gb|EEH19782.1| eukaryotic translation initiation factor 3 subunit p42/p44
[Paracoccidioides brasiliensis Pb03]
Length = 323
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 198 KGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLS 257
KGG ++GG+ + L + N+ A+ EI+DMF G V V++ + +T ++
Sbjct: 224 KGGAAAGERMGGKYERDDLATLRVTNVSELAEEQEIRDMFERFGRVTRVFLAKDRETNMA 283
Query: 258 KGFAFVKFTCKRDAESAIQKFNGQKFGKR 286
KGFAF+ F + DA A +K +G FG R
Sbjct: 284 KGFAFISFQDRSDAARACEKMDG--FGYR 310
>gi|285808363|gb|ADC35892.1| RNP-1 like RNA-binding protein [uncultured bacterium 246]
Length = 104
Score = 57.0 bits (136), Expect = 3e-05, Method: Composition-based stats.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + N+ F+ E++ F G + + I + DTG ++GFAFV+ T DA AI
Sbjct: 4 VFVGNMSFQTTEGELRAAFETYGEIARIQIMTDRDTGQARGFAFVEMTNDEDAAKAIAGL 63
Query: 279 NGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGS 320
NG + R + V+ A PK GG A G ++G + D GS
Sbjct: 64 NGTQLDGRALNVNEAKPK---PQGGGARGGNDRGGYSRDRGS 102
>gi|212275520|ref|NP_001130064.1| uncharacterized protein LOC100191156 [Zea mays]
gi|194688202|gb|ACF78185.1| unknown [Zea mays]
gi|414869215|tpg|DAA47772.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
gi|448878192|gb|AGE46059.1| arginine/serine-rich splicing factor SC32 transcript I [Zea mays]
Length = 256
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%)
Query: 217 WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
+ L++ NI F+ +++ +F G V +V+IP + TG S+GFAFV++ +A+ AI
Sbjct: 16 FSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAID 75
Query: 277 KFNGQKFGKRPIAVDWA 293
+ +G+ R I V +A
Sbjct: 76 RLDGRNVDGRNIMVQFA 92
>gi|126304035|ref|XP_001381740.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Monodelphis domestica]
Length = 409
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
+IK F+P G + + + + TG SKG+ FV F K DAE+AIQ+ GQ G R I +
Sbjct: 135 DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN 194
Query: 292 WAV-----PKNIYSS 301
WA PK+ Y S
Sbjct: 195 WATRKPPAPKSTYES 209
>gi|156350360|ref|XP_001622249.1| predicted protein [Nematostella vectensis]
gi|156208737|gb|EDO30149.1| predicted protein [Nematostella vectensis]
Length = 88
Score = 57.0 bits (136), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 50/79 (63%)
Query: 215 QKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESA 274
+ W L + NI +A+ ++I ++FS G + N+++ + TG KG+A V++ ++A+SA
Sbjct: 3 EGWILFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYETFKEAQSA 62
Query: 275 IQKFNGQKFGKRPIAVDWA 293
++ NG + + I+VDWA
Sbjct: 63 LEALNGAEMLGQNISVDWA 81
>gi|406602740|emb|CCH45698.1| Nuclear localization sequence-binding protein [Wickerhamomyces
ciferrii]
Length = 467
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 48/79 (60%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+ F A + + ++FS G + +V IP + DT KGF +V++ +A++A++
Sbjct: 340 LFLGNLSFNANRDNLSEVFSEYGSIVSVRIPTHPDTEQPKGFGYVQYGSVDEAKAALEAL 399
Query: 279 NGQKFGKRPIAVDWAVPKN 297
NG+ RP+ +D++ P++
Sbjct: 400 NGEYIEGRPVRLDFSAPRD 418
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 48/79 (60%), Gaps = 5/79 (6%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
+T+F+ NL F+ + + + + FS +G +VS H T++PKG G++++ +V+ A AA+
Sbjct: 338 DTLFLGNLSFNANRDNLSEVFSEYGSIVSVRIPTHPDTEQPKGFGYVQYGSVDEAKAALE 397
Query: 486 ASKTTSGLGIFLKGRQLTV 504
A G +++GR + +
Sbjct: 398 ALN-----GEYIEGRPVRL 411
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 233 IKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDW 292
+K F P+G V + + TG S+G+ +V F K AE A++++ G++ RPI +D
Sbjct: 251 LKREFEPLGGVISARVIFERATGKSRGYGYVDFDSKSAAEKALKEYQGREIDGRPINLDM 310
Query: 293 AVPK 296
+ K
Sbjct: 311 STGK 314
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%)
Query: 422 DELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAAT 481
DE T+F+ L + +D+E +K+ F G V+S + + T + +G G++ F + AA
Sbjct: 231 DEEPATLFVGRLSWSIDDEWLKREFEPLGGVISARVIFERATGKSRGYGYVDFDSKSAAE 290
Query: 482 AAV 484
A+
Sbjct: 291 KAL 293
>gi|268569468|ref|XP_002640530.1| Hypothetical protein CBG18692 [Caenorhabditis briggsae]
Length = 85
Score = 57.0 bits (136), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 47/77 (61%)
Query: 217 WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
+ + + N PF++ EI D FS G V NV I ++ +TG +GFAFV+++ ++ A+ A+
Sbjct: 5 YSVYVGNAPFQSTEQEIGDFFSQKGNVTNVRIVYDRETGRPRGFAFVEYSDEQSAQRAVN 64
Query: 277 KFNGQKFGKRPIAVDWA 293
+ NG F R + V+ A
Sbjct: 65 ELNGADFNGRQLRVNLA 81
>gi|170574206|ref|XP_001892710.1| cleavage stimulation factor [Brugia malayi]
gi|158601568|gb|EDP38456.1| cleavage stimulation factor, putative [Brugia malayi]
Length = 334
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NI ++ ++K +FS VG V ++ + H+ DTG KG+ F ++ + AESAI+
Sbjct: 28 VFVGNISYEVGEEQLKQVFSQVGAVVHLRLVHDRDTGKPKGYGFCEYNDSQTAESAIRNL 87
Query: 279 NGQKFGKRPIAVDWA 293
NG + RP+ VD A
Sbjct: 88 NGFELNGRPLRVDSA 102
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 422 DELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAAT 481
D ++F+ N+ +++ E++KQ FS G VV V + T +PKG GF ++ + A
Sbjct: 22 DRSARSVFVGNISYEVGEEQLKQVFSQVGAVVHLRLVHDRDTGKPKGYGFCEYNDSQTAE 81
Query: 482 AAVSASKTTSGLGIFLKGRQLTV 504
+A+ G L GR L V
Sbjct: 82 SAIRNLN-----GFELNGRPLRV 99
>gi|448520030|ref|XP_003868205.1| hypothetical protein CORT_0B10690 [Candida orthopsilosis Co 90-125]
gi|380352544|emb|CCG22770.1| hypothetical protein CORT_0B10690 [Candida orthopsilosis]
Length = 498
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 204 ARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFV 263
ARQ G + S L I N+ F A +++ ++F G V + +P + DT KGF +V
Sbjct: 345 ARQFGDQQSPPSD-TLFIGNLSFNANRDKLFEVFGEYGNVISCRLPTHPDTQQPKGFGYV 403
Query: 264 KFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKN 297
+F+ +A++A++ NG+ RP +D++ P++
Sbjct: 404 QFSSVDEAKAALEALNGEYLEGRPCRLDFSAPRD 437
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 5/75 (6%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
+T+FI NL F+ + +++ + F +G V+S H T++PKG G+++F +V+ A AA+
Sbjct: 357 DTLFIGNLSFNANRDKLFEVFGEYGNVISCRLPTHPDTQQPKGFGYVQFSSVDEAKAALE 416
Query: 486 ASKTTSGLGIFLKGR 500
A G +L+GR
Sbjct: 417 ALN-----GEYLEGR 426
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 398 KVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVP 457
K+ + +N+ ++K K+ ++ DE TIF L +++D++ +K+ F V+S
Sbjct: 228 KIEEAESINTPENK-KAKSESFTTDEEPATIFAGRLSWNIDDDWLKREFEHLEGVISARV 286
Query: 458 VLHQVTKRPKGTGFLKFKTVEAATAAVS 485
++ + T + +G G++ F + AA A++
Sbjct: 287 IMERATGKSRGYGYVDFSSKSAAENAIA 314
>gi|302843752|ref|XP_002953417.1| hypothetical protein VOLCADRAFT_75761 [Volvox carteri f.
nagariensis]
gi|300261176|gb|EFJ45390.1| hypothetical protein VOLCADRAFT_75761 [Volvox carteri f.
nagariensis]
Length = 140
Score = 57.0 bits (136), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 52/88 (59%)
Query: 209 GEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCK 268
G + + W + I + +A+ +I + F+ G V N+Y+ + TG KG+A V++ +
Sbjct: 48 GPTASVEGWVVFITGVNEEAQEEDIHEAFAEFGDVKNIYLNLDRQTGFVKGYALVEYKTQ 107
Query: 269 RDAESAIQKFNGQKFGKRPIAVDWAVPK 296
++A++AI + NG+K ++ + VDWA K
Sbjct: 108 KEAQAAINEMNGKKLLEQTLQVDWAFRK 135
>gi|155964979|gb|ABU40522.1| Y14-like protein [Marsilea vestita]
Length = 203
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 58/97 (59%), Gaps = 7/97 (7%)
Query: 208 GGEGSK--TQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
GG G + + W +++ + +A+ +++ ++F G + N+++ N TG KG+A +++
Sbjct: 86 GGPGPQRSIEGWIILVTGVHEEAQEDDLHELFGEFGEIKNLHLNLNRRTGFVKGYALIEY 145
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSG 302
K++A++AI + NG + + IAVDWA +SSG
Sbjct: 146 EKKQEAQAAINQLNGAQLLTQTIAVDWA-----FSSG 177
>gi|380748929|ref|NP_001244132.1| nucleolysin TIAR isoform 2 [Gallus gallus]
gi|28883273|gb|AAO49720.1| TIA-1 [Gallus gallus]
Length = 372
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 9/128 (7%)
Query: 183 KSACASVALLHQKEIKGGTV---WARQLGGEGSKTQK-WKLIIRNIPFKAKVNEIKDMFS 238
+ A +++A ++ ++I G V WA + T + + + ++ + +IK F+
Sbjct: 57 RHAASALAAMNGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFA 116
Query: 239 PVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAV---- 294
P G + + + + TG SKG+ FV F K DAE+AIQ+ GQ G R I +WA
Sbjct: 117 PFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPP 176
Query: 295 -PKNIYSS 301
PK+ Y S
Sbjct: 177 APKSTYES 184
>gi|345328415|ref|XP_001513073.2| PREDICTED: cleavage stimulation factor subunit 2-like
[Ornithorhynchus anatinus]
Length = 1036
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 65/128 (50%), Gaps = 9/128 (7%)
Query: 165 LAQEGCKMDASAV-LYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRN 223
L Q C +D V + V V + ++++ + + GG G+ + N
Sbjct: 407 LQQATCGLDLRHVTIIELVGRPPQEVGRIREQQLSADVIEELRSGGHGA--------LGN 458
Query: 224 IPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKF 283
IP++A ++KD+FS VG V + + ++ +TG KG+ F ++ + A SA++ NG++F
Sbjct: 459 IPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREF 518
Query: 284 GKRPIAVD 291
R + VD
Sbjct: 519 SGRALRVD 526
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 432 NLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV 484
N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 458 NIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 510
>gi|315046452|ref|XP_003172601.1| hypothetical protein MGYG_05193 [Arthroderma gypseum CBS 118893]
gi|311342987|gb|EFR02190.1| hypothetical protein MGYG_05193 [Arthroderma gypseum CBS 118893]
Length = 481
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L I NI F A + ++++FS G + + +P + ++G KGF +V+F+ +A +A++
Sbjct: 346 LFIGNISFSADESMVQELFSKYGSIQGIRLPTDPESGRPKGFGYVQFSSVDEARAAMEAE 405
Query: 279 NGQKFGKRPIAVDWAVPK 296
+G G R I +D++ PK
Sbjct: 406 HGADLGGRSIRLDYSTPK 423
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
+F NL +++D E ++ F FGE+V V + + R +G G+++F VE A A +A
Sbjct: 240 LFAGNLSWNVDEEWLRSEFEEFGELVGTRIVTDRESGRSRGFGYVEFANVEDAVKAHAAK 299
Query: 488 KTTSGLGIFLKGRQLTV 504
K + L GR+L +
Sbjct: 300 KD-----VELDGRKLNL 311
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHR 49
+ T S +GFGYVQF+ +++A A+E ++G +GGR I + ++ +
Sbjct: 375 LPTDPESGRPKGFGYVQFSSVDEARAAMEAEHGADLGGRSIRLDYSTPK 423
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGV 43
+VT + S RGFGYV+FA +EDA +A K + GRK+ +
Sbjct: 269 IVTDRESGRSRGFGYVEFANVEDAVKAHAAKKDVELDGRKLNL 311
>gi|134106861|ref|XP_777972.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260672|gb|EAL23325.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 444
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L I ++ F +++ + F G V +V +P + DTG KGF +V+F+ DA +A++
Sbjct: 298 LWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDASAALKAM 357
Query: 279 NGQKFGKRPIAVDWAVPK 296
NG + R I VD+A PK
Sbjct: 358 NGAEIAGRAIRVDFAPPK 375
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLE--QRRSK 58
+V + S + RGFGYV+FA +E + +A+E K+G+ + GR I V +A R E ++R++
Sbjct: 227 VVFDRDSQKSRGFGYVEFADLESSAKAIE-KDGSEIDGRAIRVNYATQRKPNEAAEKRAR 285
Query: 59 VTQEVQAEDIE 69
V + Q+ E
Sbjct: 286 VFNDKQSPPAE 296
Score = 46.2 bits (108), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 420 GEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEA 479
G++E +F+ L +++DN+ +K F + GEVVS V + +++ +G G+++F +E+
Sbjct: 190 GDEEATTNVFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLES 249
Query: 480 ATAAVSASKTTSGLGIFLKGRQLTVLKALDKK 511
+ A+ G + GR + V A +K
Sbjct: 250 SAKAIEKD------GSEIDGRAIRVNYATQRK 275
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHA 46
+ T + + +GFGYVQF+ ++DA+ A++ NG + GR I V A
Sbjct: 327 LPTDRDTGAPKGFGYVQFSSVDDASAALKAMNGAEIAGRAIRVDFA 372
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T++I +L F + ++V + F G+V S + T PKG G+++F +V+ A+AA+ A
Sbjct: 297 TLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDASAALKA 356
Query: 487 SKTTSGLGIFLKGRQLTV 504
G + GR + V
Sbjct: 357 MN-----GAEIAGRAIRV 369
>gi|350635107|gb|EHA23469.1| hypothetical protein ASPNIDRAFT_173997 [Aspergillus niger ATCC
1015]
Length = 235
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 204 ARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFV 263
AR G + S L + N+PF A + + ++F G + + +P + D+G KGF +V
Sbjct: 98 ARSFGDQASPESD-TLFVGNLPFDANEDSVGELFGEKGSILGIRLPTDPDSGRPKGFGYV 156
Query: 264 KFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPK 296
+++ +A +A + G RP+ +D++ P+
Sbjct: 157 QYSSVDEARAAFNELQGADLLGRPVRLDFSTPR 189
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
+T+F+ NLPFD + + V + F G ++ + RPKG G++++ +V+ A AA +
Sbjct: 110 DTLFVGNLPFDANEDSVGELFGEKGSILGIRLPTDPDSGRPKGFGYVQYSSVDEARAAFN 169
Query: 486 ASKTTSGLG 494
+ LG
Sbjct: 170 ELQGADLLG 178
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRAS 51
++T++ + RGFGYV++ DA +A E K G + GR I + +A R +
Sbjct: 32 IMTERDTGRSRGFGYVEYTNAVDAAKAFEAKKGAEIDGRVINLDYATGRPA 82
>gi|344296752|ref|XP_003420068.1| PREDICTED: cleavage stimulation factor subunit 2-like [Loxodonta
africana]
Length = 582
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VG V + + ++ +TG KG+ F ++ + A SA++
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 78 NGREFSGRALRVDNA 92
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 20/127 (15%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR- 75
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
L GR+ + +AL +D + +E N L ++E +P
Sbjct: 76 ---------NLNGREFSG-RAL--------RVDNAASEKNKEELKSLGTGAPVIE-SPYG 116
Query: 547 EGVSDDD 553
E +S +D
Sbjct: 117 ETISPED 123
>gi|401399856|ref|XP_003880652.1| probable RNA-binding protein 19, related [Neospora caninum Liverpool]
gi|325115063|emb|CBZ50619.1| probable RNA-binding protein 19, related [Neospora caninum Liverpool]
Length = 1099
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 213 KTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAE 272
+ Q K++++N+ F+A ++++ +FS G V V IP + G S+GFAFV F K++A+
Sbjct: 1009 QAQSNKVLVKNLAFQASASDLRGLFSAYGNVTRVCIPRQHE-GRSRGFAFVDFATKQEAQ 1067
Query: 273 SAIQKFNGQK-FGKRPI 288
+A+ +G +G+R +
Sbjct: 1068 NAVDALSGSHLYGRRLV 1084
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L+I+N+PF V+E++ + G V ++ + +T +GF FV F A +A+ +
Sbjct: 495 RLLIQNLPFATAVDELRALCEEYGEVAEAHLVVDEETRKPRGFGFVTFVFPEHAVAALPR 554
Query: 278 FNGQKFGKRPIAVDWAVP 295
NG F R + A P
Sbjct: 555 LNGSIFQGRLLGAFPARP 572
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV 484
+ I NLPF +E++ +GEV V+ + T++P+G GF+ F E A AA+
Sbjct: 496 LLIQNLPFATAVDELRALCEEYGEVAEAHLVVDEETRKPRGFGFVTFVFPEHAVAAL 552
>gi|295672357|ref|XP_002796725.1| 28 kDa ribonucleoprotein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283705|gb|EEH39271.1| 28 kDa ribonucleoprotein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 474
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L I NI F A + I + F+ G + V +P + ++G KGF +V+F+ +A SA +
Sbjct: 337 LFIGNIAFSADESMISETFAEYGSILGVRLPTDPESGRPKGFGYVQFSSIDEARSAFESL 396
Query: 279 NGQKFGKRPIAVDWAVPK 296
NG + R + +D++ P+
Sbjct: 397 NGSELAGRAMRLDFSTPR 414
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 416 KQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFK 475
K+T E +FI NL +++D E ++ F FGE+ V + + R KG G+++F
Sbjct: 221 KKTRVEPTEGGNLFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSKGFGYVEFT 280
Query: 476 TVEAATAAVSASKTTSGLGIFLKGRQLTV 504
E A A +A K T L GR+L V
Sbjct: 281 NAEDAVKAHAAKKDTE-----LDGRKLNV 304
Score = 42.4 bits (98), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQR 55
+VT + S +GFGYV+F EDA +A K T + GRK+ V A R++ R
Sbjct: 262 IVTDRDSGRSKGFGYVEFTNAEDAVKAHAAKKDTELDGRKLNVDFANARSNAAPR 316
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 33/58 (56%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAA 483
+T+FI N+ F D + + F+ +G ++ + RPKG G+++F +++ A +A
Sbjct: 335 DTLFIGNIAFSADESMISETFAEYGSILGVRLPTDPESGRPKGFGYVQFSSIDEARSA 392
>gi|356552180|ref|XP_003544447.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 425
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 112/272 (41%), Gaps = 39/272 (14%)
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNG--QKFGKRPI 288
N + F+ G + ++ + N TGLS+G+ FV+F AE +Q + G ++P
Sbjct: 111 NYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNTEQPF 170
Query: 289 AVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDD--DLGDDDAETASDDSNSSEKEDLPS 346
++WA +S+G D GSD+ DL + A+D ++S E
Sbjct: 171 RLNWAT----FSTG--------------DKGSDNVPDLSIFVGDLAADVTDSLLHETF-- 210
Query: 347 NADFDEEVDIARKVLNKLT--STTGSLPSLSDDS----ALVKGNKEQDSDKTVNESAKVS 400
A V A+ V + T S DD+ A+ + N S + + A
Sbjct: 211 -ASVYPSVKAAKVVFDANTGRSKGYGFVRFGDDNQRTQAMTQMNGVYCSSRPMRIGAATP 269
Query: 401 DVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VPVL 459
S + + D TIF+ L ++ +E+++Q FS +GE+VS +PV
Sbjct: 270 RKSSGHQQGGQSNGTANQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVG 329
Query: 460 HQVTKRPKGTGFLKFKTVEAATAAVSASKTTS 491
KG GF++F A A+ TS
Sbjct: 330 -------KGCGFVQFANRNNAEEALQKLNGTS 354
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
+++ FS G + +V IP + KG FV+F + +AE A+QK NG GK+ + +
Sbjct: 310 DLRQPFSQYGEIVSVKIP------VGKGCGFVQFANRNNAEEALQKLNGTSIGKQTVRLS 363
Query: 292 WA 293
W
Sbjct: 364 WG 365
>gi|213515090|ref|NP_001135023.1| cytotoxic granule-associated RNA binding protein 1 [Salmo salar]
gi|209738084|gb|ACI69911.1| Nucleolysin TIA-1 [Salmo salar]
Length = 409
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 65/125 (52%), Gaps = 7/125 (5%)
Query: 177 VLYTTVKSACASVALLHQKEIKGGTV---WARQLGGEGSKTQ----KWKLIIRNIPFKAK 229
+ + V +A +++++L+ +E+ G + WA G+ ++Q + + ++P +
Sbjct: 68 MTFADVNTATSALSILNGREVMGKKLKVSWASGGAGQFKQSQISGTTHSIYVGDLPHECD 127
Query: 230 VNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIA 289
N + F P G V + + + ++GLSKGF F+ + + +AE AIQK +G + +
Sbjct: 128 DNMLAQAFRPFGEVLSSRVVRDPESGLSKGFGFIVYRHQYEAEEAIQKMHGGTISSKSVK 187
Query: 290 VDWAV 294
V WA
Sbjct: 188 VSWAT 192
>gi|254572962|ref|XP_002493590.1| Nucleolar protein that binds nuclear localization sequences
[Komagataella pastoris GS115]
gi|238033389|emb|CAY71411.1| Nucleolar protein that binds nuclear localization sequences
[Komagataella pastoris GS115]
gi|328354581|emb|CCA40978.1| Nuclear localization sequence-binding protein [Komagataella
pastoris CBS 7435]
Length = 362
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 48/79 (60%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+ F+A + + ++FS G V +V IP + +T KGF +V+F+ +A A++
Sbjct: 231 LFLGNLSFQADRDTLFELFSKHGNVTSVRIPTHPETEQPKGFGYVQFSSVDEATGALEAL 290
Query: 279 NGQKFGKRPIAVDWAVPKN 297
NG+ RPI +D++ P++
Sbjct: 291 NGEYVDNRPIRLDYSTPRD 309
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
+T+F+ NL F D + + + FS G V S H T++PKG G+++F +V+ AT A+
Sbjct: 229 DTLFLGNLSFQADRDTLFELFSKHGNVTSVRIPTHPETEQPKGFGYVQFSSVDEATGALE 288
Query: 486 A 486
A
Sbjct: 289 A 289
>gi|356508060|ref|XP_003522779.1| PREDICTED: 30 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 297
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 14/146 (9%)
Query: 213 KTQKWKLIIRNIPFKAKVNEIKDMF-SPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDA 271
K + L + N+ ++A ++K+ F S G V + + + + G+ FV + K++A
Sbjct: 160 KVVTFNLFVANLSYEASAKDLKEFFDSGTGKVVSAEVVYRDNPRRPSGYGFVSYKSKKEA 219
Query: 272 ESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDS-GSDDDLGDDDAE 330
E+A+ +F G+ F RPI VD VQ GDG++ S + DL + AE
Sbjct: 220 EAALAEFQGKIFMGRPIRVDR-----------GRRFVQQPGDGSAKSEDTPSDLSVNGAE 268
Query: 331 TASDDSNSSEKEDLPSNADFD-EEVD 355
S++ ED PS + EE D
Sbjct: 269 AQQPAEGSAKSEDTPSELSVNGEEAD 294
>gi|58258845|ref|XP_566835.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222972|gb|AAW41016.1| single-stranded DNA binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 441
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L I ++ F +++ + F G V +V +P + DTG KGF +V+F+ DA +A++
Sbjct: 295 LWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDASAALKAM 354
Query: 279 NGQKFGKRPIAVDWAVPK 296
NG + R I VD+A PK
Sbjct: 355 NGAEIAGRAIRVDFAPPK 372
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLE--QRRSK 58
+V + S + RGFGYV+FA +E + +A+E K+G+ + GR I V +A R E ++R++
Sbjct: 224 VVFDRDSQKSRGFGYVEFADLESSAKAIE-KDGSEIDGRAIRVNYATQRKPNEAAEKRAR 282
Query: 59 VTQEVQAEDIE 69
V + Q+ E
Sbjct: 283 VFNDKQSPPAE 293
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 420 GEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEA 479
G++E +F+ L +++DN+ +K F + GEVVS V + +++ +G G+++F +E+
Sbjct: 187 GDEEATTNVFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLES 246
Query: 480 ATAAVSASKTTSGLGIFLKGRQLTVLKALDKK 511
+ A+ G + GR + V A +K
Sbjct: 247 SAKAIEKD------GSEIDGRAIRVNYATQRK 272
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHA 46
+ T + + +GFGYVQF+ ++DA+ A++ NG + GR I V A
Sbjct: 324 LPTDRDTGAPKGFGYVQFSSVDDASAALKAMNGAEIAGRAIRVDFA 369
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
T++I +L F + ++V + F G+V S + T PKG G+++F +V+ A+AA+ A
Sbjct: 294 TLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDASAALKA 353
Query: 487 SKTTSGLGIFLKGRQLTV 504
G + GR + V
Sbjct: 354 MN-----GAEIAGRAIRV 366
>gi|395850633|ref|XP_003797884.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 2
[Otolemur garnettii]
Length = 596
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VG V + + ++ +TG KG+ F ++ + A SA++
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 78 NGREFSGRALRVDNA 92
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 20/127 (15%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR- 75
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
L GR+ + +AL +D + +E N L ++E +P
Sbjct: 76 ---------NLNGREFSG-RAL--------RVDNAASEKNKEELKSLGTGAPVIE-SPYG 116
Query: 547 EGVSDDD 553
E +S +D
Sbjct: 117 ETISPED 123
>gi|358421036|ref|XP_001254105.2| PREDICTED: cleavage stimulation factor subunit 2-like [Bos taurus]
Length = 331
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VG V + + ++ +TG KG+ F ++ + A SA++
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 78 NGREFSGRALRVDNA 92
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 68/153 (44%), Gaps = 31/153 (20%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
L GR+ + +AL +D + +E N L ++E +P
Sbjct: 77 ----------LNGREFSG-RAL--------RVDNAASEKNKEELKSLGTGAPVIE-SPYG 116
Query: 547 EGVSDDD-----------MSKRQMLHEKKMTKL 568
E +S +D + QM K KL
Sbjct: 117 ETISPEDAPESISKAVASLPPEQMFELMKQMKL 149
>gi|115462709|ref|NP_001054954.1| Os05g0223200 [Oryza sativa Japonica Group]
gi|55733832|gb|AAV59339.1| unknown protein [Oryza sativa Japonica Group]
gi|113578505|dbj|BAF16868.1| Os05g0223200 [Oryza sativa Japonica Group]
gi|215741183|dbj|BAG97678.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 104
Score = 56.6 bits (135), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 209 GEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCK 268
G SK Q+ ++ + N+P++A +KD FS G V + I + +TG S+GF FV F
Sbjct: 15 GSDSKGQESRVYVGNLPYRADERSLKDSFSNYGAV-SSEIAVDRETGRSRGFGFVSFQDS 73
Query: 269 RDAESAIQKFNGQKFGKRPIAVDWAVPKN 297
+ A AI+ NGQ G R + V A P++
Sbjct: 74 KSASDAIKGMNGQDIGGRNVIVQEAQPRS 102
>gi|444518829|gb|ELV12414.1| Cleavage stimulation factor subunit 2 [Tupaia chinensis]
Length = 409
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VG V + + ++ +TG KG+ F ++ + A SA++
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 78 NGREFSGRALRVDNA 92
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 20/127 (15%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
L GR+ + +AL +D + +E N L ++E +P
Sbjct: 77 ----------LNGREFSG-RAL--------RVDNAASEKNKEELKSLGTGAPVIE-SPYG 116
Query: 547 EGVSDDD 553
E +S +D
Sbjct: 117 ETISPED 123
>gi|147765735|emb|CAN73378.1| hypothetical protein VITISV_037535 [Vitis vinifera]
Length = 306
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%)
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
+++++FS G + VY+ + TGLS+GF +V F + DAE AI K NG + + V+
Sbjct: 240 DLRELFSRFGQLTRVYVAIDHKTGLSRGFGYVNFVNREDAERAISKLNGYGYDSLILQVE 299
Query: 292 WAVPK 296
W+ P+
Sbjct: 300 WSTPR 304
>gi|73965401|ref|XP_537585.2| PREDICTED: ELAV-like protein 1-like [Canis lupus familiaris]
Length = 326
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 83/189 (43%), Gaps = 14/189 (7%)
Query: 112 EDCSQKQRVARTVIIGGLLNADMAE-EVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGC 170
EDC + + RT +I L +M + E+ L SIG V S L ++++ H L
Sbjct: 11 EDC--RDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAK--LIRDKVAGHSLGY--- 63
Query: 171 KMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKV 230
+ Y T K A ++ L+ ++ T+ + L I +P
Sbjct: 64 ----GFLNYVTAKDAERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQ 119
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQK--FGKRPI 288
+++D FS + N + + TGLS+G AF++F + +AE AI FNG K PI
Sbjct: 120 KDVEDTFSRFWRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPI 179
Query: 289 AVDWAVPKN 297
V +A N
Sbjct: 180 TVKFAANPN 188
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%)
Query: 211 GSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRD 270
G+ + W + I N+ A + MF P G V NV + + +T KGF FV T +
Sbjct: 238 GNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEE 297
Query: 271 AESAIQKFNGQKFGKRPIAVDWAVPK 296
A AI NG + G + + V + K
Sbjct: 298 AAMAIASLNGYRLGDKILQVSFKTNK 323
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
LI+ +P +E++ +FS +G V + + + G S G+ F+ + +DAE AI
Sbjct: 22 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFLNYVTAKDAERAINTL 81
Query: 279 NGQKFGKRPIAVDWAVPK-------NIYSSG 302
NG + + I V +A P N+Y SG
Sbjct: 82 NGLRLQSKTIKVSYARPSSEVIKDANLYISG 112
>gi|291287189|ref|YP_003504005.1| RNP-1 like RNA-binding protein [Denitrovibrio acetiphilus DSM
12809]
gi|290884349|gb|ADD68049.1| RNP-1 like RNA-binding protein [Denitrovibrio acetiphilus DSM
12809]
Length = 94
Score = 56.6 bits (135), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 51/86 (59%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + N+ + + +E+ ++F +G V + I + DTG SKGF FV+ A++AI++
Sbjct: 3 IYVGNLSYTSSEDELFELFENMGQVDSARIITDRDTGRSKGFGFVEMADAEQAKAAIEQL 62
Query: 279 NGQKFGKRPIAVDWAVPKNIYSSGGA 304
NG +FG R + V+ A P+N SGG
Sbjct: 63 NGTEFGGRNLTVNEAKPRNNDRSGGG 88
Score = 40.8 bits (94), Expect = 2.5, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHR 49
++T + + +GFG+V+ A E A A+E NGT GGR + V A R
Sbjct: 32 IITDRDTGRSKGFGFVEMADAEQAKAAIEQLNGTEFGGRNLTVNEAKPR 80
>gi|348542282|ref|XP_003458614.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oreochromis
niloticus]
Length = 386
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 62/118 (52%), Gaps = 4/118 (3%)
Query: 183 KSACASVALLHQKEIKGGTV---WARQLGGEGSKTQK-WKLIIRNIPFKAKVNEIKDMFS 238
+ A A++A ++ ++I G V WA + T + + + ++ + ++IK F+
Sbjct: 57 RHATATIAAMNGRKILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFA 116
Query: 239 PVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPK 296
P G + + + + TG SKG+ FV F K DAE+AIQ+ GQ G R I +WA K
Sbjct: 117 PFGKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRK 174
>gi|345565557|gb|EGX48506.1| hypothetical protein AOL_s00080g135 [Arthrobotrys oligospora ATCC
24927]
Length = 147
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
Query: 198 KGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLS 257
+G V +R + G W +++ N+ +A ++ D+F+ G V N+++ + TG
Sbjct: 18 QGAPVPSRSIEG-------WIVLVTNVHEEAGEEDLNDLFAEHGEVQNLHLNLDRRTGYV 70
Query: 258 KGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWA 293
KG+A V+++ K +A+SAI +G K + ++ DWA
Sbjct: 71 KGYALVEYSTKEEAQSAIDSIDGSKLLDQTVSADWA 106
>gi|395850631|ref|XP_003797883.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 1
[Otolemur garnettii]
Length = 576
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VG V + + ++ +TG KG+ F ++ + A SA++
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 78 NGREFSGRALRVDNA 92
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 20/127 (15%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR- 75
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
L GR+ + +AL +D + +E N L ++E +P
Sbjct: 76 ---------NLNGREFSG-RAL--------RVDNAASEKNKEELKSLGTGAPVIE-SPYG 116
Query: 547 EGVSDDD 553
E +S +D
Sbjct: 117 ETISPED 123
>gi|353238423|emb|CCA70370.1| probable RNA-binding protein [Piriformospora indica DSM 11827]
Length = 799
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 209 GEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCK 268
G+ SK++ KLI++N+ F+ E+ ++FS G V +V +P+ D S+GFAFV F +
Sbjct: 673 GKHSKSKGTKLIVKNLAFEVSKKELWELFSAHGQVKSVRLPNRADR-RSRGFAFVDFATR 731
Query: 269 RDAESAIQKFNGQKFGKRPIAVDWA 293
+AE+A+ + R + ++WA
Sbjct: 732 NEAENAMGQLRHSHLLGRHLVLEWA 756
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 20/101 (19%)
Query: 423 ELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-------------VPVLHQVTKRPKGT 469
E +F+ NL F +E+ FS FG + +PV PKG
Sbjct: 269 ETNGRLFVRNLVFSCTQDELTAHFSPFGPIEQLQFTSAELTHSQVHIPV--DAESNPKGF 326
Query: 470 GFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDK 510
+++FK A AA A TS +GR L +L A+D+
Sbjct: 327 AYVRFKDASHAVAAYEALDKTS-----FQGRLLHILPAIDR 362
>gi|343427935|emb|CBQ71460.1| related to NSR1-nuclear localization sequence binding protein
[Sporisorium reilianum SRZ2]
Length = 459
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L I N+ F +++ + FS G V V +P + D+G KGF +V+F + A++A+
Sbjct: 308 LFIGNLSFDISEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAALDAM 367
Query: 279 NGQKFGKRPIAVDWAVP 295
GQ+ RP+ +D++ P
Sbjct: 368 TGQELAGRPLRLDFSTP 384
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 46/101 (45%), Gaps = 17/101 (16%)
Query: 404 KLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVT 463
K N +S P S T+FI NL FD+ ++V FS GEV +
Sbjct: 296 KFNDQRSAPSS------------TLFIGNLSFDISEDDVWNAFSEHGEVSGVRLPKDPDS 343
Query: 464 KRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV 504
RPKG G+++F E+A AA+ A G L GR L +
Sbjct: 344 GRPKGFGYVEFAAQESAQAALDAM-----TGQELAGRPLRL 379
>gi|317968520|ref|ZP_07969910.1| RNA recognition motif-containing protein [Synechococcus sp. CB0205]
Length = 157
Score = 56.6 bits (135), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + N+PF+A+ ++ ++F+P G V N +P DTG +GFAFV+ + AI
Sbjct: 3 IFVGNLPFRAEQEDVAELFAPFGEVANCSLPLERDTGRKRGFAFVELVDPESEDRAIDAL 62
Query: 279 NGQKFGKRPIAVDWAVPK 296
G + RP+ ++ A P+
Sbjct: 63 QGAELMGRPLRINKAEPR 80
Score = 43.5 bits (101), Expect = 0.41, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
+IF+ NLPF + E+V + F+ FGEV + L + T R +G F++ E+ A+ A
Sbjct: 2 SIFVGNLPFRAEQEDVAELFAPFGEVANCSLPLERDTGRKRGFAFVELVDPESEDRAIDA 61
Query: 487 SKTTSGLGIFLKGRQLTVLKA 507
+ G L GR L + KA
Sbjct: 62 LQ-----GAELMGRPLRINKA 77
>gi|222613180|gb|EEE51312.1| hypothetical protein OsJ_32272 [Oryza sativa Japonica Group]
Length = 167
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 59/112 (52%), Gaps = 10/112 (8%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVG------LVWNVYIPHNTDTGLSKG 259
Q G +G +++ +L + N+ F+ ++I MFSP G +W+ P G +G
Sbjct: 3 QKGFDGDRSES-RLYVGNLDFRVSESDIIKMFSPFGKIIAEDFLWHTRGPKR---GEPRG 58
Query: 260 FAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNK 311
+AFV++T K +A+ A +K NG+ RP+ V A K SG + +++K
Sbjct: 59 YAFVQYTTKEEAQLAKEKMNGRLVCGRPVVVHLASEKCFVDSGNSHRAMKDK 110
>gi|344230193|gb|EGV62078.1| hypothetical protein CANTEDRAFT_115527 [Candida tenuis ATCC 10573]
Length = 309
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 210 EGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGL-VWNVYIPHNTDTGLSK------GFAF 262
E T + ++ I N+ FKA+ +++K F GL V V IP +K GFAF
Sbjct: 6 ESKPTIEGRIYIGNVDFKAEEDDLKQFFE--GLTVEEVSIPSKIRKYGTKTVEKHLGFAF 63
Query: 263 VKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPK 296
V+F DAE AI+K+NGQ+F R I V AVP+
Sbjct: 64 VQFKTDADAEQAIEKYNGQEFKNRKIYVKKAVPE 97
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 10 HRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSK 58
H GF +VQF DA +A+E NG RKI VK A+ + E+++ K
Sbjct: 58 HLGFAFVQFKTDADAEQAIEKYNGQEFKNRKIYVKKAVPEPTEEEKQKK 106
>gi|340372565|ref|XP_003384814.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Amphimedon
queenslandica]
Length = 169
Score = 56.6 bits (135), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+ F+ +EIK +F G V ++YIP + T S+GFAFV+F KRDAE A+++
Sbjct: 4 LKVDNLSFRMTPDEIKPIFEKYGEVGDIYIPRDPYTKESRGFAFVRFYEKRDAEDAMERL 63
Query: 279 NGQKFGKRPIAVDWA 293
+G R + V A
Sbjct: 64 DGYVIDGREMRVQLA 78
>gi|148666753|gb|EDK99169.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_c
[Mus musculus]
Length = 293
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
+IK F+P G + + + + TG SKG+ FV F K DAE+AIQ+ GQ G R I +
Sbjct: 118 DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN 177
Query: 292 WAV-----PKNIYSS 301
WA PK+ Y S
Sbjct: 178 WATRKPPAPKSTYES 192
>gi|449455799|ref|XP_004145638.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
G-like [Cucumis sativus]
gi|449530442|ref|XP_004172204.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
G-like [Cucumis sativus]
Length = 288
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%)
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
++ ++F P G V VY+ + G+S+GF FV F + DA+ +I K NG + + V+
Sbjct: 222 DLLELFRPFGAVSRVYVAVDQKNGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVE 281
Query: 292 WAVPK 296
WA P+
Sbjct: 282 WATPR 286
>gi|317027210|ref|XP_003188595.1| nucleolin protein Nsr1 [Aspergillus niger CBS 513.88]
Length = 536
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 204 ARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFV 263
AR G + S + L + N+PF A + + ++F G + + +P + D+G KGF +V
Sbjct: 382 ARSFGDQAS-PESDTLFVGNLPFDANEDSVGELFGEKGSILGIRLPTDPDSGRPKGFGYV 440
Query: 264 KFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPK 296
+++ +A +A + G RP+ +D++ P+
Sbjct: 441 QYSSVDEARAAFNELQGADLLGRPVRLDFSTPR 473
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAA 483
+T+F+ NLPFD + + V + F G ++ + RPKG G++++ +V+ A AA
Sbjct: 394 DTLFVGNLPFDANEDSVGELFGEKGSILGIRLPTDPDSGRPKGFGYVQYSSVDEARAA 451
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRAS 51
++T++ + RGFGYV++ DA +A E K G + GR I + +A R +
Sbjct: 316 IMTERDTGRSRGFGYVEYTNAVDAAKAFEAKKGAEIDGRVINLDYATGRPA 366
>gi|317027208|ref|XP_001400395.2| nucleolin protein Nsr1 [Aspergillus niger CBS 513.88]
Length = 539
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 204 ARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFV 263
AR G + S + L + N+PF A + + ++F G + + +P + D+G KGF +V
Sbjct: 385 ARSFGDQAS-PESDTLFVGNLPFDANEDSVGELFGEKGSILGIRLPTDPDSGRPKGFGYV 443
Query: 264 KFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPK 296
+++ +A +A + G RP+ +D++ P+
Sbjct: 444 QYSSVDEARAAFNELQGADLLGRPVRLDFSTPR 476
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAA 483
+T+F+ NLPFD + + V + F G ++ + RPKG G++++ +V+ A AA
Sbjct: 397 DTLFVGNLPFDANEDSVGELFGEKGSILGIRLPTDPDSGRPKGFGYVQYSSVDEARAA 454
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRAS 51
++T++ + RGFGYV++ DA +A E K G + GR I + +A R +
Sbjct: 319 IMTERDTGRSRGFGYVEYTNAVDAAKAFEAKKGAEIDGRVINLDYATGRPA 369
>gi|449303128|gb|EMC99136.1| hypothetical protein BAUCODRAFT_120428 [Baudoinia compniacensis
UAMH 10762]
Length = 822
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 211 GSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRD 270
G+KT K+II+N+PF+A +++ +F G + +V +P D ++GFAF FT ++
Sbjct: 698 GTKT---KIIIKNLPFEATKKDVRALFGAFGQLRSVRVPKKMDRA-ARGFAFADFTTPKE 753
Query: 271 AESAIQKFNGQKFGKRPIAVDWA 293
AESA++ R + +D+A
Sbjct: 754 AESAMEALRNTHLLGRRLVLDFA 776
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 43/69 (62%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+P+ A +++ F P G + V++ + TG +KGFAF++++ AE A+++
Sbjct: 301 RLFVRNLPYSATKEDLEAEFEPFGNLAAVHVSMSKKTGSAKGFAFIQYSDADAAERALRE 360
Query: 278 FNGQKFGKR 286
+GQ F R
Sbjct: 361 KDGQTFQGR 369
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 428 IFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSAS 487
I I NLPF+ ++V+ F AFG++ S V V ++ + +G F F T + A +A+ A
Sbjct: 703 IIIKNLPFEATKKDVRALFGAFGQLRS-VRVPKKMDRAARGFAFADFTTPKEAESAMEAL 761
Query: 488 KTTSGLG 494
+ T LG
Sbjct: 762 RNTHLLG 768
>gi|387017378|gb|AFJ50807.1| Nucleolysin TIA-1 isoform p40 [Crotalus adamanteus]
Length = 392
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
+IK F+P G + + + + TG SKG+ FV F K DAE+AIQ+ GQ G R I +
Sbjct: 121 DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN 180
Query: 292 WAV-----PKNIYSS 301
WA PK+ Y S
Sbjct: 181 WATRKPPAPKSTYES 195
>gi|395005502|ref|ZP_10389379.1| RRM domain-containing RNA-binding protein [Acidovorax sp. CF316]
gi|394316555|gb|EJE53276.1| RRM domain-containing RNA-binding protein [Acidovorax sp. CF316]
Length = 130
Score = 56.6 bits (135), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL + N+P+ + +++ FS G V + + DTG SKGF FV+ +A++AIQ
Sbjct: 4 KLYVGNLPYSFRDEDLQQTFSQYGSVGSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQG 63
Query: 278 FNGQKFGKRPIAVDWAVP 295
+GQ FG R + V+ A P
Sbjct: 64 VHGQNFGGRDLVVNEARP 81
Score = 43.1 bits (100), Expect = 0.46, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 424 LQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAA 483
+ N +++ NLP+ +E+++Q FS +G V S ++ + T R KG GF++ + A AA
Sbjct: 1 MGNKLYVGNLPYSFRDEDLQQTFSQYGSVGSAKVMMERDTGRSKGFGFVEMGSDAEAQAA 60
Query: 484 VSASKTTSGLGIFLKGRQLTVLKA 507
+ G GR L V +A
Sbjct: 61 IQGVH-----GQNFGGRDLVVNEA 79
>gi|326936530|ref|XP_003214306.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Meleagris gallopavo]
Length = 423
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
+IK F+P G + + + + TG SKG+ FV F K DAE+AIQ+ GQ G R I +
Sbjct: 161 DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN 220
Query: 292 WAV-----PKNIYSS 301
WA PK+ Y S
Sbjct: 221 WATRKPPAPKSTYES 235
>gi|120613407|ref|YP_973085.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
gi|120591871|gb|ABM35311.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
Length = 123
Score = 56.6 bits (135), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 46/78 (58%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL + N+P+ + ++++ FS G V + + DTG SKGF FV+ +A++AIQ
Sbjct: 4 KLYVGNLPYSFRDDDLQQTFSQYGSVASAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQG 63
Query: 278 FNGQKFGKRPIAVDWAVP 295
+GQ FG R + V+ A P
Sbjct: 64 AHGQNFGGRDLVVNEARP 81
Score = 43.9 bits (102), Expect = 0.25, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 424 LQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAA 483
+ N +++ NLP+ +++++Q FS +G V S ++ + T R KG GF++ + A AA
Sbjct: 1 MGNKLYVGNLPYSFRDDDLQQTFSQYGSVASAKVMMERDTGRSKGFGFVEMGSDAEAQAA 60
Query: 484 VSASKTTSGLGIFLKGRQLTVLKA 507
+ + G GR L V +A
Sbjct: 61 IQGAH-----GQNFGGRDLVVNEA 79
>gi|255760011|ref|NP_001157551.1| nucleolysin TIA-1 isoform 3 [Mus musculus]
gi|23271442|gb|AAH23813.1| Tia1 protein [Mus musculus]
Length = 285
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
+IK F+P G + + + + TG SKG+ FV F K DAE+AIQ+ GQ G R I +
Sbjct: 110 DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN 169
Query: 292 WAV-----PKNIYSS 301
WA PK+ Y S
Sbjct: 170 WATRKPPAPKSTYES 184
>gi|218184933|gb|EEC67360.1| hypothetical protein OsI_34460 [Oryza sativa Indica Group]
Length = 167
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 59/112 (52%), Gaps = 10/112 (8%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVG------LVWNVYIPHNTDTGLSKG 259
Q G +G +++ +L + N+ F+ ++I MFSP G +W+ P G +G
Sbjct: 3 QKGFDGDRSES-RLYVGNLDFRVSESDIIKMFSPFGKIIAEDFLWHTRGPKR---GEPRG 58
Query: 260 FAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNK 311
+AFV++T K +A+ A +K NG+ RP+ V A K SG + +++K
Sbjct: 59 YAFVQYTTKEEAQLAKEKMNGRLVCGRPVVVHLASEKCFVDSGNSHRAMKDK 110
>gi|348570430|ref|XP_003471000.1| PREDICTED: cleavage stimulation factor subunit 2-like [Cavia
porcellus]
Length = 577
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VG V + + ++ +TG KG+ F ++ + A SA++
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 78 NGREFSGRALRVDNA 92
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 20/127 (15%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR- 75
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
L GR+ + +AL +D + +E N L ++E +P
Sbjct: 76 ---------NLNGREFSG-RAL--------RVDNAASEKNKEELKSLGTGAPVIE-SPYG 116
Query: 547 EGVSDDD 553
E +S +D
Sbjct: 117 ETISPED 123
>gi|403298762|ref|XP_003940176.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403298764|ref|XP_003940177.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 577
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VG V + + ++ +TG KG+ F ++ + A SA++
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 78 NGREFSGRALRVDNA 92
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 20/127 (15%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR- 75
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
L GR+ + +AL +D + +E N L ++E +P
Sbjct: 76 ---------NLNGREFSG-RAL--------RVDNAASEKNKEELKSLGTGAPVIE-SPYG 116
Query: 547 EGVSDDD 553
E +S +D
Sbjct: 117 ETISPED 123
>gi|348551182|ref|XP_003461409.1| PREDICTED: probable RNA-binding protein 19-like [Cavia porcellus]
Length = 961
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 147/374 (39%), Gaps = 73/374 (19%)
Query: 206 QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265
Q E SKT ++ +N+P E+++ FS G + V +P T A V+F
Sbjct: 578 QAAAERSKTV---ILAKNLPAGTLAAELQETFSRFGSLGRVLLPEGGIT------AIVEF 628
Query: 266 TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLG 325
+A A + KF P+ ++WA P I+SS V K +++
Sbjct: 629 LEPLEARKAFRHLAYSKFHHVPLYLEWA-PIGIFSSTAPQEKVPQKAATQPTGEDEEEPE 687
Query: 326 DDDAETASDDSNSSEKEDLPS----------------------------NADFDEEVDIA 357
D ET + + E P+ N +FD +
Sbjct: 688 AADMETPETEKPAEEGTAAPTTRTEGGGEEEEEEEEEEESLPGCTLFIKNLNFDTTEETL 747
Query: 358 RKVLNK-----------LTSTTGSLPSLSDDSALVKGNKEQDSDKTVNE-SAKVSDVSK- 404
+KV +K S G+L LS V+ K + + K + + V D K
Sbjct: 748 KKVFSKAGALRSCSISKKKSKAGAL--LSMGFGFVEYKKPEHAQKALRQLQGHVVDGHKV 805
Query: 405 ---LNSSKSKP---KSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-VP 457
++ +KP S K+ + + I + N+PF D E+++ FS FGE+ + +P
Sbjct: 806 EVRISERATKPAMTSSWKKQVPRKQTTSKILVRNIPFQADLREIRELFSTFGELKTVRLP 865
Query: 458 VLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV--------LKALD 509
T R +G GF+ F T + A A +A ++ L GR+L + L+AL
Sbjct: 866 KKMAGTGRHRGFGFVDFFTKQDAKRAFNALCHST----HLYGRRLVLEWADSEVTLQALR 921
Query: 510 KKLA-HDKEIDKSK 522
+K A H E K K
Sbjct: 922 RKTAEHFHEPPKKK 935
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+P+ + +++ +FS G + ++ P +T T KGFAFV F A A +
Sbjct: 403 RLFVRNLPYTSTEEDLEKLFSAYGPLSELHYPIDTLTKKPKGFAFVTFLFPEHAVKAYAE 462
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAAAGV 308
+GQ F R + V +P I G AG
Sbjct: 463 VDGQVFQGRMLHV---LPSTIKKEAGEEAGA 490
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 64/120 (53%), Gaps = 8/120 (6%)
Query: 397 AKVSDVSKLNSSKS-KPKSLKQTEGEDELQNT--IFICNLPFDLDNEEVKQRFSAFGEVV 453
A V+ NSSK+ + ++L + E E++L ++ +F+ NLP+ E++++ FSA+G +
Sbjct: 370 APVAKAPPKNSSKAWQGRTLGENEEEEDLADSGRLFVRNLPYTSTEEDLEKLFSAYGPLS 429
Query: 454 SFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLA 513
+ +TK+PKG F+ F E A A + G +GR L VL + KK A
Sbjct: 430 ELHYPIDTLTKKPKGFAFVTFLFPEHAVKAYAEVD-----GQVFQGRMLHVLPSTIKKEA 484
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 6 GSNEHRGFGYVQFAVMEDANRAVE-MKNGTSVGGRKIGVKHAMHRASLEQRRSKVTQEVQ 64
G+ HRGFG+V F +DA RA + + T + GR++ ++ A +L+ R K +
Sbjct: 870 GTGRHRGFGFVDFFTKQDAKRAFNALCHSTHLYGRRLVLEWADSEVTLQALRRKTAEHFH 929
Query: 65 AEDIEKTMDNKDGVISGAEKHSS 87
+K DG++ E S
Sbjct: 930 EPPKKKRSAVLDGILQQLEDSES 952
>gi|335306285|ref|XP_003360436.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 2
[Sus scrofa]
Length = 592
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VG V + + ++ +TG KG+ F ++ + A SA++
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 78 NGREFSGRALRVDNA 92
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 20/127 (15%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR- 75
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
L GR+ + +AL +D + +E N L ++E +P
Sbjct: 76 ---------NLNGREFSG-RAL--------RVDNAASEKNKEELKSLGTGAPVIE-SPYG 116
Query: 547 EGVSDDD 553
E +S +D
Sbjct: 117 ETISPED 123
>gi|50286801|ref|XP_445830.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525136|emb|CAG58749.1| unnamed protein product [Candida glabrata]
Length = 425
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+ F A + I ++F G + +V IP + +T KGF +V++T DA+ A++
Sbjct: 279 LFLGNLSFNADRDNIYEIFGKFGEIISVRIPTHPETEQPKGFGYVQYTSIDDAKKALEAL 338
Query: 279 NGQKFGKRPIAVDWAVPK 296
G+ RP+ +D++ PK
Sbjct: 339 QGEYIDNRPVRLDYSTPK 356
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 40/64 (62%)
Query: 423 ELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATA 482
E +T+F+ NL F+ D + + + F FGE++S H T++PKG G++++ +++ A
Sbjct: 274 EPSDTLFLGNLSFNADRDNIYEIFGKFGEIISVRIPTHPETEQPKGFGYVQYTSIDDAKK 333
Query: 483 AVSA 486
A+ A
Sbjct: 334 ALEA 337
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 409 KSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKG 468
+S PK K T+GE T+F+ L + +D+E +KQ F G VV+ + + T R +G
Sbjct: 163 ESSPKKAK-TDGE---PATVFVGRLSWSIDDEWLKQEFEHIGGVVAARVMYERGTDRSRG 218
Query: 469 TGFLKFKTVEAATAAV 484
G++ F+ A AV
Sbjct: 219 YGYVDFEDKSYAEKAV 234
>gi|403298766|ref|XP_003940178.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 597
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VG V + + ++ +TG KG+ F ++ + A SA++
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 78 NGREFSGRALRVDNA 92
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 20/127 (15%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR- 75
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
L GR+ + +AL +D + +E N L ++E +P
Sbjct: 76 ---------NLNGREFSG-RAL--------RVDNAASEKNKEELKSLGTGAPVIE-SPYG 116
Query: 547 EGVSDDD 553
E +S +D
Sbjct: 117 ETISPED 123
>gi|302678229|ref|XP_003028797.1| hypothetical protein SCHCODRAFT_44661 [Schizophyllum commune H4-8]
gi|300102486|gb|EFI93894.1| hypothetical protein SCHCODRAFT_44661 [Schizophyllum commune H4-8]
Length = 252
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%)
Query: 199 GGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSK 258
GG + G G + L + NI + N+++++F G V VY+ + +TG K
Sbjct: 154 GGRAAGESMRGAGGRDDLPTLRVTNISEDTQENDLRELFGVFGRVARVYVGRDRETGQGK 213
Query: 259 GFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWA 293
GFAFV F + A+ A++K NG+ + ++V W+
Sbjct: 214 GFAFVSFEDRAIAQRAMEKVNGKGYDNLILSVQWS 248
>gi|426257829|ref|XP_004022524.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Ovis
aries]
Length = 572
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VG V + + ++ +TG KG+ F ++ + A SA++
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 78 NGREFSGRALRVDNA 92
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 20/127 (15%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR- 75
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
L GR+ + +AL +D + +E N L ++E +P
Sbjct: 76 ---------NLNGREFSG-RAL--------RVDNAASEKNKEELKSLGTGAPVIE-SPYG 116
Query: 547 EGVSDDD 553
E +S +D
Sbjct: 117 ETISPED 123
>gi|311276614|ref|XP_003135279.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 1
[Sus scrofa]
Length = 572
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VG V + + ++ +TG KG+ F ++ + A SA++
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 78 NGREFSGRALRVDNA 92
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 20/127 (15%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR- 75
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
L GR+ + +AL +D + +E N L ++E +P
Sbjct: 76 ---------NLNGREFSG-RAL--------RVDNAASEKNKEELKSLGTGAPVIE-SPYG 116
Query: 547 EGVSDDD 553
E +S +D
Sbjct: 117 ETISPED 123
>gi|169623995|ref|XP_001805404.1| hypothetical protein SNOG_15247 [Phaeosphaeria nodorum SN15]
gi|111056352|gb|EAT77472.1| hypothetical protein SNOG_15247 [Phaeosphaeria nodorum SN15]
Length = 451
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+ F I+++F G + V +P + DTG KGF +V F +A +A++
Sbjct: 300 LFLGNLSFDCSNEGIQEIFQEYGNITRVSLPTDRDTGSLKGFGYVDFGTVEEATAALEAL 359
Query: 279 NGQKFGKRPIAVDWAVPK 296
NGQ+ R I +D+A P+
Sbjct: 360 NGQEVEGRAIRIDYAAPR 377
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
NT+F+ NL FD NE +++ F +G + + T KG G++ F TVE ATAA+
Sbjct: 298 NTLFLGNLSFDCSNEGIQEIFQEYGNITRVSLPTDRDTGSLKGFGYVDFGTVEEATAALE 357
Query: 486 A 486
A
Sbjct: 358 A 358
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRA 50
+ T + + +GFGYV F +E+A A+E NG V GR I + +A RA
Sbjct: 329 LPTDRDTGSLKGFGYVDFGTVEEATAALEALNGQEVEGRAIRIDYAAPRA 378
>gi|68465417|ref|XP_723070.1| potential single-stranded nucleic acid binding protein [Candida
albicans SC5314]
gi|68465712|ref|XP_722924.1| potential single-stranded nucleic acid binding protein [Candida
albicans SC5314]
gi|46444932|gb|EAL04203.1| potential single-stranded nucleic acid binding protein [Candida
albicans SC5314]
gi|46445087|gb|EAL04357.1| potential single-stranded nucleic acid binding protein [Candida
albicans SC5314]
Length = 282
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSK------GFAFVKFTCKRDA 271
++ + N+ FKA +E+K++F + V V IP +T K GFAFV+F K DA
Sbjct: 17 RIYVGNVDFKATEDELKELFQDLK-VTEVEIPFKENTRGDKVFKRHLGFAFVQFENKDDA 75
Query: 272 ESAIQKFNGQKFGKRPIAVDWAVP 295
+ AI +NGQKF +R I + AVP
Sbjct: 76 DKAIATYNGQKFQRRNIFIKKAVP 99
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 11/114 (9%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVW----NVYIPHNTD-------TGLSKGFAFVKFTC 267
+ I N+ +K V + +F + W + +P+N +KG AFVKF+
Sbjct: 169 IFITNLDYKVNVKTLNSLFKELKPKWIHVPSRRVPYNRRGRGGKFRKPFNKGIAFVKFSN 228
Query: 268 KRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSD 321
+ + A+ +FNG++ R I VD A+ I G V ++ + ++S +
Sbjct: 229 EETQKQAVAEFNGKEVNGREIIVDIAIDSRIPKEGSTEEDVDDEENAEANSNGN 282
>gi|390480015|ref|XP_003735829.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2
[Callithrix jacchus]
Length = 577
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VG V + + ++ +TG KG+ F ++ + A SA++
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 78 NGREFSGRALRVDNA 92
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 20/127 (15%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR- 75
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
L GR+ + +AL +D + +E N L ++E +P
Sbjct: 76 ---------NLNGREFSG-RAL--------RVDNAASEKNKEELKSLGTGAPVIE-SPYG 116
Query: 547 EGVSDDD 553
E +S +D
Sbjct: 117 ETISPED 123
>gi|192764314|gb|ACF05701.1| alphaCstF-64 variant 4 [Mus musculus]
Length = 554
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VG V + + ++ +TG KG+ F ++ + A SA++
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 78 NGREFSGRALRVDNA 92
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 20/127 (15%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR- 75
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
L GR+ + +AL +D + +E N L ++E +P
Sbjct: 76 ---------NLNGREFSG-RAL--------RVDNAASEKNKEELKSLGTGAPVIE-SPYG 116
Query: 547 EGVSDDD 553
E +S +D
Sbjct: 117 ESISPED 123
>gi|119224067|gb|AAI26544.1| CSTF2 protein [Bos taurus]
Length = 592
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VG V + + ++ +TG KG+ F ++ + A SA++
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 78 NGREFSGRALRVDNA 92
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 20/127 (15%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR- 75
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
L GR+ + +AL +D + +E N L ++E +P
Sbjct: 76 ---------NLNGREFSG-RAL--------RVDNAASEKNKEELKSLGTGAPVIE-SPYG 116
Query: 547 EGVSDDD 553
E +S +D
Sbjct: 117 ETISPED 123
>gi|432119731|gb|ELK38615.1| ELAV-like protein 1 [Myotis davidii]
Length = 296
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 136 EEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVLYTTVKSACASVALLHQK 195
+E+ L SIG V S L ++++ H L V Y T K A ++ L+
Sbjct: 4 DELRSLFSSIGEVESAK--LIRDKVAGHSLGY-------GFVNYVTAKDAEKAINTLNGL 54
Query: 196 EIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTG 255
++ T+ + L I +P +++DMFS G + N + + TG
Sbjct: 55 RLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 114
Query: 256 LSKGFAFVKFTCKRDAESAIQKFNGQK--FGKRPIAVDWAVPKN 297
LS+G AF++F + +AE AI FNG K PI V +A N
Sbjct: 115 LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPN 158
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%)
Query: 211 GSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRD 270
G+ + W + I N+ A + MF P G V NV + + +T KGF FV T +
Sbjct: 208 GNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEE 267
Query: 271 AESAIQKFNGQKFGKRPIAVDW 292
A AI NG + G + + V +
Sbjct: 268 AAMAIASLNGYRLGDKILQVSF 289
>gi|21619877|gb|AAH33135.1| Similar to cleavage stimulation factor, 3' pre-RNA, subunit 2,
64kD, partial [Homo sapiens]
Length = 559
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VG V + + ++ +TG KG+ F ++ + A SA++
Sbjct: 17 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 76
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 77 NGREFSGRALRVDNA 91
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 20/127 (15%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 16 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR- 74
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
L GR+ + +AL +D + +E N L ++E +P
Sbjct: 75 ---------NLNGREFSG-RAL--------RVDNAASEKNKEELKSLGTGAPVIE-SPYG 115
Query: 547 EGVSDDD 553
E +S +D
Sbjct: 116 ETISPED 122
>gi|397643662|gb|EJK76002.1| hypothetical protein THAOC_02254 [Thalassiosira oceanica]
Length = 869
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 192 LHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHN 251
L K + GG A ++ KT K+++RN+PF+A +E+ +F G + V +P
Sbjct: 732 LSTKSLSGGNSRAPEVDKSARKT---KIMVRNVPFEATRSELLQLFGSFGQLKKVRLPKK 788
Query: 252 TDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWA 293
D G +GFAF +F ++A +A+ + R + ++WA
Sbjct: 789 FD-GTHRGFAFCEFVTSKEARNAMTSLSQTHLYGRRLVLEWA 829
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 208 GGEGS-KTQKW-----KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFA 261
GGE S +TQ +L +RN+PF E+ + FS G + +V+IP + D +KG+A
Sbjct: 308 GGEASDQTQPLLQLADRLFVRNLPFTTTEEELHETFSHFGQINSVHIPVD-DAKRNKGYA 366
Query: 262 FVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVP 295
FV+F K+DA+ A++ +G+ F R I + A P
Sbjct: 367 FVEFESKKDAKIAMESMDGEDFQGRLIHIMPAKP 400
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 16/155 (10%)
Query: 386 EQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQR 445
E S N S + + + SS+ ++ QT+ +L + +F+ NLPF EE+ +
Sbjct: 283 EVKSSTVANRSGQPVEANGNESSRGGGEASDQTQPLLQLADRLFVRNLPFTTTEEELHET 342
Query: 446 FSAFGEVVSF-VPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQLTV 504
FS FG++ S +PV KR KG F++F++ + A A+ + G +GR + +
Sbjct: 343 FSHFGQINSVHIPV--DDAKRNKGYAFVEFESKKDAKIAMESMD-----GEDFQGRLIHI 395
Query: 505 LKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLI 539
+ A K ++ +D+ ND Y K+ +I
Sbjct: 396 MPA---KPTKERALDE-----NDPNLSYKEKQAII 422
>gi|27807239|ref|NP_777110.1| cleavage stimulation factor subunit 2 [Bos taurus]
gi|71153228|sp|Q8HXM1.1|CSTF2_BOVIN RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|24416593|gb|AAN05427.1| CstF-64 [Bos taurus]
gi|296470997|tpg|DAA13112.1| TPA: cleavage stimulation factor 64 kDa subunit [Bos taurus]
Length = 572
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VG V + + ++ +TG KG+ F ++ + A SA++
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 78 NGREFSGRALRVDNA 92
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 20/127 (15%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR- 75
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
L GR+ + +AL +D + +E N L ++E +P
Sbjct: 76 ---------NLNGREFSG-RAL--------RVDNAASEKNKEELKSLGTGAPVIE-SPYG 116
Query: 547 EGVSDDD 553
E +S +D
Sbjct: 117 ETISPED 123
>gi|426257831|ref|XP_004022525.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Ovis
aries]
Length = 592
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VG V + + ++ +TG KG+ F ++ + A SA++
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 78 NGREFSGRALRVDNA 92
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 20/127 (15%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR- 75
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
L GR+ + +AL +D + +E N L ++E +P
Sbjct: 76 ---------NLNGREFSG-RAL--------RVDNAASEKNKEELKSLGTGAPVIE-SPYG 116
Query: 547 EGVSDDD 553
E +S +D
Sbjct: 117 ETISPED 123
>gi|291408103|ref|XP_002720432.1| PREDICTED: cleavage stimulation factor subunit 2 [Oryctolagus
cuniculus]
Length = 576
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VG V + + ++ +TG KG+ F ++ + A SA++
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 78 NGREFSGRALRVDNA 92
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 20/127 (15%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR- 75
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
L GR+ + +AL +D + +E N L ++E +P
Sbjct: 76 ---------NLNGREFSG-RAL--------RVDNAASEKNKEELKSLGTGAPVIE-SPYG 116
Query: 547 EGVSDDD 553
E +S +D
Sbjct: 117 ETISPED 123
>gi|242018247|ref|XP_002429590.1| A-kinase anchor protein, putative [Pediculus humanus corporis]
gi|212514557|gb|EEB16852.1| A-kinase anchor protein, putative [Pediculus humanus corporis]
Length = 408
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+PFDL E++K+ FS G V+SF V + +PKG GF ++K +E A SA
Sbjct: 15 SVFVGNIPFDLTEEKLKEIFSEVGPVLSFKLVYDRENGKPKGYGFCEYKDIETAN---SA 71
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKK 511
+ +G I GR L V A ++K
Sbjct: 72 MRNLNGFEI--GGRVLKVDNAANEK 94
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIPF ++K++FS VG V + + ++ + G KG+ F ++ A SA++
Sbjct: 16 VFVGNIPFDLTEEKLKEIFSEVGPVLSFKLVYDRENGKPKGYGFCEYKDIETANSAMRNL 75
Query: 279 NGQKFGKRPIAVDWA 293
NG + G R + VD A
Sbjct: 76 NGFEIGGRVLKVDNA 90
>gi|194373969|dbj|BAG62297.1| unnamed protein product [Homo sapiens]
Length = 553
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VG V + + ++ +TG KG+ F ++ + A SA++
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 78 NGREFSGRALRVDNA 92
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 20/127 (15%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR- 75
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
L GR+ + +AL +D + +E N L ++E +P
Sbjct: 76 ---------NLNGREFSG-RAL--------RVDNAASEKNKEELKSLGTGAPVIE-SPYG 116
Query: 547 EGVSDDD 553
E +S +D
Sbjct: 117 ETISPED 123
>gi|337281471|ref|YP_004620943.1| glycine-rich RNA binding protein [Ramlibacter tataouinensis TTB310]
gi|334732548|gb|AEG94924.1| Candidate glycine-rich RNA binding protein [Ramlibacter
tataouinensis TTB310]
Length = 128
Score = 56.6 bits (135), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 47/78 (60%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
KL + N+P+ + ++++ FS G V + + DTG SKGF FV+ + +A++AI+
Sbjct: 4 KLYVGNLPYSYRDSDMEQAFSQFGTVSSAKVMMERDTGRSKGFGFVEMSSPAEAQAAIEG 63
Query: 278 FNGQKFGKRPIAVDWAVP 295
NGQ+ G R + V+ A P
Sbjct: 64 MNGQQIGGRGLVVNEARP 81
Score = 42.0 bits (97), Expect = 0.97, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 424 LQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAA 483
+ N +++ NLP+ + +++Q FS FG V S ++ + T R KG GF++ + A AA
Sbjct: 1 MGNKLYVGNLPYSYRDSDMEQAFSQFGTVSSAKVMMERDTGRSKGFGFVEMSSPAEAQAA 60
Query: 484 VSASKTTSGLGIFLKGRQLTVLKA 507
+ G + GR L V +A
Sbjct: 61 IEGMN-----GQQIGGRGLVVNEA 79
>gi|226499886|ref|NP_001151590.1| heterogeneous nuclear ribonucleoprotein 27C [Zea mays]
gi|195647980|gb|ACG43458.1| heterogeneous nuclear ribonucleoprotein 27C [Zea mays]
Length = 462
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 127/307 (41%), Gaps = 31/307 (10%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVT 60
++ ++ S RGFGYV FA +DA ++ ++ +G R + VK A + ++ + +K
Sbjct: 136 VMEERSSGRSRGFGYVTFASADDAKNVLDCEH--VLGSRTLEVKIATPKEEMKSQGTKKA 193
Query: 61 QEVQAEDIEKTMDNKDGVISGAEKHSSKLLESGKTVKPRKAATLGIDLADKEDCSQKQRV 120
+ I +++D S +H E P KE S+ R
Sbjct: 194 TRIFVARIPQSVDE-----SMFRRHFEAFGEILDLYMP------------KEHGSKGHRG 236
Query: 121 ARTVIIGGLLNAD-MAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQ--EGCKMDASAV 177
+ + D + +E H L G+ V T PKEE ++ ++ +G +A
Sbjct: 237 IGFITFQSAESVDSIMQESHELDGTTVVVDRAT---PKEEDVRYPPSRPSQGGYGAYNAY 293
Query: 178 LYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMF 237
+ + A L+ G+ + R G K K+ + +P +A ++++ F
Sbjct: 294 ISAATRYATLGAPTLYDHP---GSAYGRGYYGSSQAVGK-KIFVGRLPQEANTDDLRHYF 349
Query: 238 SPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKN 297
G + + YIP + +GF FV F + AE + + + + G +A+D A P
Sbjct: 350 GRFGRIVDAYIPKDPKRSGHRGFGFVTFADEGVAER-VSRRSHEILGHE-VAIDTAAPLE 407
Query: 298 IYSSGGA 304
S+GG
Sbjct: 408 NDSAGGG 414
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Query: 388 DSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFS 447
D K V + V L + PK +++G + IF+ +P +D ++ F
Sbjct: 157 DDAKNVLDCEHVLGSRTLEVKIATPKEEMKSQGTKK-ATRIFVARIPQSVDESMFRRHFE 215
Query: 448 AFGEVVS-FVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSG 492
AFGE++ ++P H +K +G GF+ F++ E+ + + S G
Sbjct: 216 AFGEILDLYMPKEHG-SKGHRGIGFITFQSAESVDSIMQESHELDG 260
>gi|196009954|ref|XP_002114842.1| hypothetical protein TRIADDRAFT_64128 [Trichoplax adhaerens]
gi|190582904|gb|EDV22976.1| hypothetical protein TRIADDRAFT_64128 [Trichoplax adhaerens]
Length = 620
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 3/110 (2%)
Query: 181 TVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPV 240
+V+S A + Q+++ V A+Q + + ++ + +I F + + IK FSP
Sbjct: 133 SVQSLLTKQATVQQQQVSALQVAAQQ---QRALALMCRIYVGSISFDLREDHIKQTFSPF 189
Query: 241 GLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAV 290
G + N+ + +T T KGFAF++F A+ A+++ NGQ G R I V
Sbjct: 190 GPIKNINLSWDTVTMKHKGFAFIEFETPEAAQLALEQMNGQLMGGRNIKV 239
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 20/171 (11%)
Query: 371 LPSLSD--DSALVKGNK---EQDSDKTVNESAKVSD--VSKLNSSKSKPKSLKQTEGEDE 423
LP+L+D + AL K + EQ + + A V VS L + + ++L
Sbjct: 111 LPTLNDVQEEALRKAKRYAVEQSVQSLLTKQATVQQQQVSALQVAAQQQRALA------- 163
Query: 424 LQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAA 483
L I++ ++ FDL + +KQ FS FG + + VT + KG F++F+T EAA A
Sbjct: 164 LMCRIYVGSISFDLREDHIKQTFSPFGPIKNINLSWDTVTMKHKGFAFIEFETPEAAQLA 223
Query: 484 VSASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLA 534
+ G + GR + V + A I + + E ++ +Y+A
Sbjct: 224 LEQMN-----GQLMGGRNIKVGRPTQMPQAGPL-IQQIEEEAKNYARIYVA 268
>gi|453086802|gb|EMF14844.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 169
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 217 WKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQ 276
W +I+ N+ +A +I+DMF G + N+++ + TG KG+ +++ +A++AIQ
Sbjct: 55 WIIIVTNVHEEASEEDIQDMFGEYGDIKNLHMNLDRRTGYVKGYVLIEYPTLDEAKAAIQ 114
Query: 277 KFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKG 312
+G++ ++ I VD+A + S G G Q KG
Sbjct: 115 DADGKELLEQTIGVDYAFVRPPPSKGAPPKG-QRKG 149
>gi|268574300|ref|XP_002642127.1| C. briggsae CBR-RNP-4 protein [Caenorhabditis briggsae]
Length = 142
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%)
Query: 208 GGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTC 267
GG + W + + NI +A +++ D FS G + N+++ + TG KG+A V++
Sbjct: 46 GGPQRSVEGWIVFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYET 105
Query: 268 KRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSG 302
+++A AI+K N + + VDW K +SG
Sbjct: 106 QKEASEAIEKSNDTDLLGQNVKVDWCFIKGKKTSG 140
>gi|395731713|ref|XP_002811971.2| PREDICTED: LOW QUALITY PROTEIN: nucleolysin TIA-1 isoform p40
[Pongo abelii]
Length = 386
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
+IK F+P G + + + + TG SKG+ FV F K DAE+AIQ+ GQ G R I +
Sbjct: 121 DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN 180
Query: 292 WAV-----PKNIYSS 301
WA PK+ Y S
Sbjct: 181 WATRKPPAPKSTYES 195
>gi|312373610|gb|EFR21320.1| hypothetical protein AND_17210 [Anopheles darlingi]
Length = 170
Score = 56.2 bits (134), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L + N+ ++ ++++ +F G V ++YIP + T S+GFAFV+F KRDAE A+
Sbjct: 17 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFAFVRFYDKRDAEDALDAM 76
Query: 279 NGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSG 319
+G+ R + V A G Q +G GN +G
Sbjct: 77 DGRMLDGRELRVQMA-------RYGRPTSPQRRGGGNRHNG 110
>gi|302834547|ref|XP_002948836.1| hypothetical protein VOLCADRAFT_120666 [Volvox carteri f.
nagariensis]
gi|300266027|gb|EFJ50216.1| hypothetical protein VOLCADRAFT_120666 [Volvox carteri f.
nagariensis]
Length = 262
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%)
Query: 212 SKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDA 271
S+ + L++RN+P + +++ F G + +VYIP + T +GF FV+F RDA
Sbjct: 12 SRAPRVSLVVRNLPLDIRAEDLRSKFEKYGELKDVYIPRDYYTQRPRGFGFVEFKDTRDA 71
Query: 272 ESAIQKFNGQKFGKRPIAVDWA 293
E A+ + R I+V ++
Sbjct: 72 EDAMYSLDRSTINGREISVTFS 93
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 49/80 (61%), Gaps = 9/80 (11%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVS-FVPVLHQVTKRPKGTGFLKFK-TVEAATAAV 484
++ + NLP D+ E+++ +F +GE+ ++P + T+RP+G GF++FK T +A A
Sbjct: 18 SLVVRNLPLDIRAEDLRSKFEKYGELKDVYIPRDY-YTQRPRGFGFVEFKDTRDAEDAMY 76
Query: 485 SASKTTSGLGIFLKGRQLTV 504
S ++T + GR+++V
Sbjct: 77 SLDRST------INGREISV 90
>gi|260943806|ref|XP_002616201.1| hypothetical protein CLUG_03443 [Clavispora lusitaniae ATCC 42720]
gi|238849850|gb|EEQ39314.1| hypothetical protein CLUG_03443 [Clavispora lusitaniae ATCC 42720]
Length = 419
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L I N+ F + N++ ++F G V + +P + DT KGF +V+F+ +A++A+
Sbjct: 284 LFIGNLSFNTERNKLFEIFGEYGTVVSCRLPTHPDTQQPKGFGYVQFSSVEEAQNALNSL 343
Query: 279 NGQKFGKRPIAVDWAVPKN 297
NG+ RP +D++ P++
Sbjct: 344 NGEYLDGRPCRLDFSTPRD 362
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVS 485
+T+FI NL F+ + ++ + F +G VVS H T++PKG G+++F +VE A A++
Sbjct: 282 DTLFIGNLSFNTERNKLFEIFGEYGTVVSCRLPTHPDTQQPKGFGYVQFSSVEEAQNALN 341
Query: 486 ASKTTSGLGIFLKGR 500
+ G +L GR
Sbjct: 342 SLN-----GEYLDGR 351
>gi|164657762|ref|XP_001730007.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
gi|159103901|gb|EDP42793.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
Length = 638
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L I + + ++I + F+ G V V +P D+G KGF +V+F + +A A++
Sbjct: 497 LFIGGLAWALTEDDIWNAFAEFGEVTGVRLPKEIDSGRPKGFGYVEFVSQDNAAKALETM 556
Query: 279 NGQKFGKRPIAVDWA 293
NGQ G RPI +D+A
Sbjct: 557 NGQALGGRPIRIDFA 571
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 7 SNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHR 49
S +GFGYV+F ++A +A+E NG ++GGR I + A R
Sbjct: 532 SGRPKGFGYVEFVSQDNAAKALETMNGQALGGRPIRIDFAGKR 574
>gi|224137382|ref|XP_002327112.1| predicted protein [Populus trichocarpa]
gi|222835427|gb|EEE73862.1| predicted protein [Populus trichocarpa]
Length = 429
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 112/268 (41%), Gaps = 40/268 (14%)
Query: 231 NEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNG--QKFGKRPI 288
N + F G + ++ + N TGLS+G+ FV+F AE +Q + G ++P
Sbjct: 107 NYLHSCFVSTGEIASIKVIRNKQTGLSEGYGFVEFLTHATAEKVLQNYGGILMPNTEQPF 166
Query: 289 AVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDDSNSSEKEDLPSNA 348
++WA +S+ GD SD+ D + D A+D ++S +E S
Sbjct: 167 RLNWAT----FST----------GDKRSDNAPDLSIFVGD--LAADVTDSLLQETFVSKY 210
Query: 349 DFDEEVDIARKVLNKLT--STTGSLPSLSDDSALVKGNKEQDSDKTVNESAKVSDVSKLN 406
V A+ V + T S DDS + E + + ++ +
Sbjct: 211 ---PSVKAAKVVFDANTGRSKGYGFVRFGDDSERTQAMTEMNGVYCSSRPMRIGAATPRK 267
Query: 407 SSKSKPKSLKQTEGE---------DELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF-V 456
SS + + + G D TIF+ L ++ +E++KQ FS +GE+VS +
Sbjct: 268 SSGYQQQGGYGSNGASAQGFQSDGDSNNTTIFVGGLDPNVTDEDLKQPFSQYGEIVSVKI 327
Query: 457 PVLHQVTKRPKGTGFLKFKTVEAATAAV 484
PV KG GF++F + A A+
Sbjct: 328 PV-------GKGCGFVQFANRDNAEEAL 348
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
++K FS G + +V IP + KG FV+F + +AE A+QK NG GK+ + +
Sbjct: 311 DLKQPFSQYGEIVSVKIP------VGKGCGFVQFANRDNAEEALQKLNGTVIGKQTVRLS 364
Query: 292 WA 293
W
Sbjct: 365 WG 366
>gi|221129841|ref|XP_002156950.1| PREDICTED: APOBEC1 complementation factor-like [Hydra
magnipapillata]
Length = 598
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 63/124 (50%), Gaps = 9/124 (7%)
Query: 177 VLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDM 236
V+Y + + A +V L+ EI+ +L G +L I IP K K +EI +
Sbjct: 133 VIYLSSRDAQRAVRTLNNYEIRKS-----RLIGVCHSVDNCRLFIGGIPKKVKKDEILEE 187
Query: 237 FSPV--GLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF-NGQ-KFGKRPIAVDW 292
S V +V + P TD ++GFAFV++ C R A A +K NG+ + PIAVDW
Sbjct: 188 ISKVTDSVVNVIVYPSATDKSKNRGFAFVEYNCHRSAAMARRKLMNGKIQLWGHPIAVDW 247
Query: 293 AVPK 296
A P+
Sbjct: 248 AEPE 251
>gi|145354241|ref|XP_001421399.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581636|gb|ABO99692.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 288
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 124/269 (46%), Gaps = 13/269 (4%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L + NIP+ + +++++F+ G V V IP G S+G+ V+F + +A++A+ +
Sbjct: 10 RLYVGNIPWSTTIEDLRELFAECGGVTRVDIPTGRQ-GRSRGYGLVEFNSEAEAQAAVTR 68
Query: 278 FNGQKFGKRPIAV--DWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDDDAETASDD 335
+G G R I V D A K + A+A V D G G+ ET S++
Sbjct: 69 MDGTPLGDRTITVREDKAPTKAAGGAKKASASVLGDAPAGGD-GCRCYFGNLAWET-SEE 126
Query: 336 SNSSEKEDLPSNADFDEEVDIARKVLNKLTSTTGSLPSLSDDSALVKGNKEQDSDKTVNE 395
+ +S N + ++AR+ + S +L + + EQ + +
Sbjct: 127 TLTSHCASFGVNV---VQCEVARQSGGR--SKGWALVDFATPEE-AQNAIEQMHNSEIQG 180
Query: 396 SAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSF 455
+ + V + + + + + E LQ I + NLP+ +E+++Q F G VV+
Sbjct: 181 RSIIVRVERPGAGQKSARVETRPENSSGLQ--IVVRNLPWTTTSEDLRQVFQQVGNVVNA 238
Query: 456 VPVLHQVTKRPKGTGFLKFKTVEAATAAV 484
V V H T R KG G + F+T E A AA+
Sbjct: 239 VAVCHTDTGRSKGWGTVLFETREQAQAAI 267
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 66/125 (52%), Gaps = 11/125 (8%)
Query: 177 VLYTTVKSACASVALLHQKEIKGGTVWAR-QLGGEGSKTQK----------WKLIIRNIP 225
V + T + A ++ +H EI+G ++ R + G G K+ + ++++RN+P
Sbjct: 158 VDFATPEEAQNAIEQMHNSEIQGRSIIVRVERPGAGQKSARVETRPENSSGLQIVVRNLP 217
Query: 226 FKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGK 285
+ +++ +F VG V N +TDTG SKG+ V F + A++AIQ FNG +
Sbjct: 218 WTTTSEDLRQVFQQVGNVVNAVAVCHTDTGRSKGWGTVLFETREQAQAAIQGFNGVELEH 277
Query: 286 RPIAV 290
RP+ +
Sbjct: 278 RPMQI 282
>gi|406676693|ref|ZP_11083878.1| hypothetical protein HMPREF1170_02086 [Aeromonas veronii AMC35]
gi|423201900|ref|ZP_17188479.1| hypothetical protein HMPREF1167_02062 [Aeromonas veronii AER39]
gi|423207067|ref|ZP_17193623.1| hypothetical protein HMPREF1168_03258 [Aeromonas veronii AMC34]
gi|423209269|ref|ZP_17195823.1| hypothetical protein HMPREF1169_01341 [Aeromonas veronii AER397]
gi|404615847|gb|EKB12806.1| hypothetical protein HMPREF1167_02062 [Aeromonas veronii AER39]
gi|404617127|gb|EKB14063.1| hypothetical protein HMPREF1169_01341 [Aeromonas veronii AER397]
gi|404621360|gb|EKB18249.1| hypothetical protein HMPREF1168_03258 [Aeromonas veronii AMC34]
gi|404625007|gb|EKB21824.1| hypothetical protein HMPREF1170_02086 [Aeromonas veronii AMC35]
Length = 93
Score = 56.2 bits (134), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 45/79 (56%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
K+ + N+ ++ +E+K +FS G V V I + DTG SKGF F++ DAE AI
Sbjct: 2 KIYVGNLSYRMTADELKTLFSQFGQVDKVDIIIDRDTGQSKGFGFIEMPVNGDAEKAIAG 61
Query: 278 FNGQKFGKRPIAVDWAVPK 296
+G + G R I V+ A PK
Sbjct: 62 LHGTEVGGRTITVNQAKPK 80
>gi|380798899|gb|AFE71325.1| cleavage stimulation factor subunit 2, partial [Macaca mulatta]
Length = 575
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VG V + + ++ +TG KG+ F ++ + A SA++
Sbjct: 16 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 75
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 76 NGREFSGRALRVDNA 90
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 20/127 (15%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 15 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR- 73
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
L GR+ + +AL +D + +E N L ++E +P
Sbjct: 74 ---------NLNGREFSG-RAL--------RVDNAASEKNKEELKSLGTGAPVIE-SPYG 114
Query: 547 EGVSDDD 553
E +S +D
Sbjct: 115 ETISPED 121
>gi|296235968|ref|XP_002763125.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1
[Callithrix jacchus]
Length = 597
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VG V + + ++ +TG KG+ F ++ + A SA++
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 78 NGREFSGRALRVDNA 92
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 20/127 (15%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR- 75
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
L GR+ + +AL +D + +E N L ++E +P
Sbjct: 76 ---------NLNGREFSG-RAL--------RVDNAASEKNKEELKSLGTGAPVIE-SPYG 116
Query: 547 EGVSDDD 553
E +S +D
Sbjct: 117 ETISPED 123
>gi|134057335|emb|CAK44534.1| unnamed protein product [Aspergillus niger]
Length = 538
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 204 ARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFV 263
AR G + S + L + N+PF A + + ++F G + + +P + D+G KGF +V
Sbjct: 384 ARSFGDQAS-PESDTLFVGNLPFDANEDSVGELFGEKGSILGIRLPTDPDSGRPKGFGYV 442
Query: 264 KFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPK 296
+++ +A +A + G RP+ +D++ P+
Sbjct: 443 QYSSVDEARAAFNELQGADLLGRPVRLDFSTPR 475
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%)
Query: 426 NTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAA 483
+T+F+ NLPFD + + V + F G ++ + RPKG G++++ +V+ A AA
Sbjct: 396 DTLFVGNLPFDANEDSVGELFGEKGSILGIRLPTDPDSGRPKGFGYVQYSSVDEARAA 453
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 1 MVTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRAS 51
++T++ + RGFGYV++ DA +A E K G + GR I + +A R +
Sbjct: 318 IMTERDTGRSRGFGYVEYTNAVDAAKAFEAKKGAEIDGRVINLDYATGRPA 368
>gi|432884715|ref|XP_004074554.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oryzias latipes]
Length = 386
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 62/118 (52%), Gaps = 4/118 (3%)
Query: 183 KSACASVALLHQKEIKGGTV---WARQLGGEGSKTQK-WKLIIRNIPFKAKVNEIKDMFS 238
+ A A++A ++ ++I G V WA + T + + + ++ + ++IK F+
Sbjct: 57 RHATATIAAMNGRKILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFA 116
Query: 239 PVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPK 296
P G + + + + TG SKG+ FV F K DAE+AIQ+ GQ G R I +WA K
Sbjct: 117 PFGKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRK 174
>gi|197100099|ref|NP_001125111.1| cleavage stimulation factor subunit 2 [Pongo abelii]
gi|71153230|sp|Q5RDA3.1|CSTF2_PONAB RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|55726993|emb|CAH90254.1| hypothetical protein [Pongo abelii]
Length = 577
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VG V + + ++ +TG KG+ F ++ + A SA++
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 78 NGREFSGRALRVDNA 92
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 20/127 (15%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR- 75
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
L GR+ + +AL +D + +E N L ++E +P
Sbjct: 76 ---------NLNGREFSG-RAL--------RVDNAASEKNKEELKSLGTGAPVIE-SPYG 116
Query: 547 EGVSDDD 553
E +S +D
Sbjct: 117 ETISPED 123
>gi|351714346|gb|EHB17265.1| Nucleolysin TIA-1 isoform p40 [Heterocephalus glaber]
Length = 386
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
+IK F+P G + + + + TG SKG+ FV F K DAE+AIQ+ GQ G R I +
Sbjct: 121 DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN 180
Query: 292 WAV-----PKNIYSS 301
WA PK+ Y S
Sbjct: 181 WATRKPPAPKSTYES 195
>gi|402910773|ref|XP_003918026.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Papio
anubis]
gi|402910775|ref|XP_003918027.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Papio
anubis]
Length = 577
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VG V + + ++ +TG KG+ F ++ + A SA++
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 78 NGREFSGRALRVDNA 92
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 20/127 (15%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR- 75
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
L GR+ + +AL +D + +E N L ++E +P
Sbjct: 76 ---------NLNGREFSG-RAL--------RVDNAASEKNKEELKSLGTGAPVIE-SPYG 116
Query: 547 EGVSDDD 553
E +S +D
Sbjct: 117 ETISPED 123
>gi|156403590|ref|XP_001639991.1| predicted protein [Nematostella vectensis]
gi|156227123|gb|EDO47928.1| predicted protein [Nematostella vectensis]
Length = 91
Score = 56.2 bits (134), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 50/79 (63%)
Query: 215 QKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESA 274
+ W L + NI +A+ ++I ++FS G + N+++ + TG KG+A V++ ++A+SA
Sbjct: 3 EGWILFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYETFKEAQSA 62
Query: 275 IQKFNGQKFGKRPIAVDWA 293
++ NG + + I+VDWA
Sbjct: 63 LEALNGAEMLGQNISVDWA 81
>gi|188219591|ref|NP_071505.2| nucleolysin TIA-1 isoform p40 isoform 2 [Homo sapiens]
gi|114577930|ref|XP_001141557.1| PREDICTED: uncharacterized protein LOC459303 isoform 2 [Pan
troglodytes]
gi|397521824|ref|XP_003830986.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Pan paniscus]
gi|206729905|sp|P31483.3|TIA1_HUMAN RecName: Full=Nucleolysin TIA-1 isoform p40; AltName:
Full=RNA-binding protein TIA-1; AltName:
Full=T-cell-restricted intracellular antigen-1;
Short=TIA-1; AltName: Full=p40-TIA-1
gi|62702267|gb|AAX93193.1| unknown [Homo sapiens]
gi|119620230|gb|EAW99824.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_b [Homo sapiens]
gi|261861076|dbj|BAI47060.1| TIA1 cytotoxic granule-associated RNA binding protein [synthetic
construct]
gi|410226260|gb|JAA10349.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410254978|gb|JAA15456.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410298556|gb|JAA27878.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410353839|gb|JAA43523.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 386
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
+IK F+P G + + + + TG SKG+ FV F K DAE+AIQ+ GQ G R I +
Sbjct: 121 DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN 180
Query: 292 WAV-----PKNIYSS 301
WA PK+ Y S
Sbjct: 181 WATRKPPAPKSTYES 195
>gi|387762942|ref|NP_001248687.1| TIA1 cytotoxic granule-associated RNA binding protein [Macaca
mulatta]
gi|84579193|dbj|BAE73030.1| hypothetical protein [Macaca fascicularis]
gi|355565763|gb|EHH22192.1| hypothetical protein EGK_05415 [Macaca mulatta]
gi|355751389|gb|EHH55644.1| hypothetical protein EGM_04890 [Macaca fascicularis]
gi|380816026|gb|AFE79887.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
gi|383421173|gb|AFH33800.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
gi|384949108|gb|AFI38159.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
Length = 386
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
+IK F+P G + + + + TG SKG+ FV F K DAE+AIQ+ GQ G R I +
Sbjct: 121 DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN 180
Query: 292 WAV-----PKNIYSS 301
WA PK+ Y S
Sbjct: 181 WATRKPPAPKSTYES 195
>gi|410298560|gb|JAA27880.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 388
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
+IK F+P G + + + + TG SKG+ FV F K DAE+AIQ+ GQ G R I +
Sbjct: 123 DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN 182
Query: 292 WAV-----PKNIYSS 301
WA PK+ Y S
Sbjct: 183 WATRKPPAPKSTYES 197
>gi|332861156|ref|XP_529072.3| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Pan
troglodytes]
gi|397478198|ref|XP_003810440.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Pan
paniscus]
gi|426396655|ref|XP_004064547.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Gorilla
gorilla gorilla]
Length = 597
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VG V + + ++ +TG KG+ F ++ + A SA++
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 78 NGREFSGRALRVDNA 92
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 20/127 (15%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR- 75
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
L GR+ + +AL +D + +E N L ++E +P
Sbjct: 76 ---------NLNGREFSG-RAL--------RVDNAASEKNKEELKSLGTGAPVIE-SPYG 116
Query: 547 EGVSDDD 553
E +S +D
Sbjct: 117 ETISPED 123
>gi|332254742|ref|XP_003276491.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1
[Nomascus leucogenys]
Length = 577
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VG V + + ++ +TG KG+ F ++ + A SA++
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 78 NGREFSGRALRVDNA 92
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 20/127 (15%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR- 75
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
L GR+ + +AL +D + +E N L ++E +P
Sbjct: 76 ---------NLNGREFSG-RAL--------RVDNAASEKNKEELKSLGTGAPVIE-SPYG 116
Query: 547 EGVSDDD 553
E +S +D
Sbjct: 117 ETISPED 123
>gi|390474361|ref|XP_003734771.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Callithrix jacchus]
gi|403260486|ref|XP_003922702.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 386
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
+IK F+P G + + + + TG SKG+ FV F K DAE+AIQ+ GQ G R I +
Sbjct: 121 DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN 180
Query: 292 WAV-----PKNIYSS 301
WA PK+ Y S
Sbjct: 181 WATRKPPAPKSTYES 195
>gi|156397171|ref|XP_001637765.1| predicted protein [Nematostella vectensis]
gi|156224880|gb|EDO45702.1| predicted protein [Nematostella vectensis]
Length = 124
Score = 56.2 bits (134), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 50/79 (63%)
Query: 215 QKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESA 274
+ W L + NI +A+ ++I ++FS G + N+++ + TG KG+A V++ ++A+SA
Sbjct: 36 EGWILFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYETFKEAQSA 95
Query: 275 IQKFNGQKFGKRPIAVDWA 293
++ NG + + I+VDWA
Sbjct: 96 LEALNGAEMLGQNISVDWA 114
>gi|26328597|dbj|BAC28037.1| unnamed protein product [Mus musculus]
Length = 580
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VG V + + ++ +TG KG+ F ++ + A SA++
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 78 NGREFSGRALRVDNA 92
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 20/127 (15%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR- 75
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
L GR+ + +AL +D + +E N L ++E +P
Sbjct: 76 ---------NLNGREFSG-RAL--------RVDNAASEKNKEELKSLGTGAPVIE-SPYG 116
Query: 547 EGVSDDD 553
E +S +D
Sbjct: 117 ESISPED 123
>gi|341896374|gb|EGT52309.1| CBN-EIF-3.G protein [Caenorhabditis brenneri]
Length = 262
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 221 IRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNG 280
+ N+P + +E++D+F +G V ++I + T L KGFAFV F + DA AI + N
Sbjct: 186 VTNLPQEMNEDELRDVFGKIGRVIRIFIARDKITALPKGFAFVTFESRDDAARAIAELND 245
Query: 281 QKFGKRPIAVDWAVPKN 297
+ + V+W P N
Sbjct: 246 IRMYHMVLKVEWTRPSN 262
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 34/61 (55%)
Query: 425 QNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV 484
+NT + NLP +++ +E++ F G V+ ++T PKG F+ F++ + A A+
Sbjct: 181 ENTCRVTNLPQEMNEDELRDVFGKIGRVIRIFIARDKITALPKGFAFVTFESRDDAARAI 240
Query: 485 S 485
+
Sbjct: 241 A 241
>gi|297304342|ref|XP_001089558.2| PREDICTED: cleavage stimulation factor subunit 2-like [Macaca
mulatta]
gi|402910777|ref|XP_003918028.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 3 [Papio
anubis]
gi|355704983|gb|EHH30908.1| hypothetical protein EGK_20728 [Macaca mulatta]
gi|355757534|gb|EHH61059.1| hypothetical protein EGM_18986 [Macaca fascicularis]
Length = 597
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VG V + + ++ +TG KG+ F ++ + A SA++
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 78 NGREFSGRALRVDNA 92
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 20/127 (15%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR- 75
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
L GR+ + +AL +D + +E N L ++E +P
Sbjct: 76 ---------NLNGREFSG-RAL--------RVDNAASEKNKEELKSLGTGAPVIE-SPYG 116
Query: 547 EGVSDDD 553
E +S +D
Sbjct: 117 ETISPED 123
>gi|307208358|gb|EFN85761.1| RNA-binding protein 28 [Harpegnathos saltator]
Length = 242
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 57/113 (50%), Gaps = 5/113 (4%)
Query: 544 PAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCIDAVV 603
P+ + DM+K L + K L++ N VSR R V++NLP + + L +L D
Sbjct: 82 PSCNRCINSDMAKHMKLEQWKSQILRNLNMFVSRVRFVVHNLPLDLDDAQLIQLFKD--- 138
Query: 604 SRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNN 656
S K +IK+ + + KK + S+ FV FT H+ AL ALR +NN
Sbjct: 139 --LSGFKAIIKEARVMHDSKKVDTAGRGKSKEYGFVTFTTHEDALKALRSINN 189
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 64/158 (40%), Gaps = 11/158 (6%)
Query: 256 LSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGN 315
+ G AFV+F + A AI N Q F R I VDWAV KN + V K
Sbjct: 1 MVNGCAFVQFDHVQSAVKAIHYANMQLFLNRTIVVDWAVLKNKFLKNITENNV--KPQIK 58
Query: 316 SDSGSDDDLGDDDAETASDD-----SNSSEKEDLPSNADFDEEVDIARKVLNKLTS---- 366
+S DD D +A+ D N D+ + ++ + LN S
Sbjct: 59 IESVDKDDADDWNAKIDRCDCRKPSCNRCINSDMAKHMKLEQWKSQILRNLNMFVSRVRF 118
Query: 367 TTGSLPSLSDDSALVKGNKEQDSDKTVNESAKVSDVSK 404
+LP DD+ L++ K+ K + + A+V SK
Sbjct: 119 VVHNLPLDLDDAQLIQLFKDLSGFKAIIKEARVMHDSK 156
>gi|18875338|ref|NP_573459.1| cleavage stimulation factor subunit 2 [Mus musculus]
gi|71153229|sp|Q8BIQ5.2|CSTF2_MOUSE RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|11139720|gb|AAG31814.1|AF317552_1 polyadenylation protein CSTF64 [Mus musculus]
gi|26353226|dbj|BAC40243.1| unnamed protein product [Mus musculus]
Length = 580
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VG V + + ++ +TG KG+ F ++ + A SA++
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 78 NGREFSGRALRVDNA 92
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 20/127 (15%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR- 75
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
L GR+ + +AL +D + +E N L ++E +P
Sbjct: 76 ---------NLNGREFSG-RAL--------RVDNAASEKNKEELKSLGTGAPVIE-SPYG 116
Query: 547 EGVSDDD 553
E +S +D
Sbjct: 117 ESISPED 123
>gi|406994417|gb|EKE13409.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 155
Score = 56.2 bits (134), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L + +PF + +E++D+F+ VG V + I + +TG SKGF FV+ +A +AI K
Sbjct: 25 RLFVAGLPFSSTQDELRDLFASVGNVVSTSIITDRETGRSKGFGFVEMETSEEASNAIAK 84
Query: 278 FNGQKFGKRPIAVDWAVP 295
N FG R + V A P
Sbjct: 85 LNDTDFGGRKLIVAEAKP 102
Score = 46.2 bits (108), Expect = 0.052, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 422 DELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAAT 481
D + +F+ LPF +E++ F++ G VVS + + T R KG GF++ +T E A+
Sbjct: 20 DNMNKRLFVAGLPFSSTQDELRDLFASVGNVVSTSIITDRETGRSKGFGFVEMETSEEAS 79
Query: 482 AAVSASKTTSGLGIFLKGRQLTVLKA 507
A++ T GR+L V +A
Sbjct: 80 NAIAKLNDTD-----FGGRKLIVAEA 100
>gi|302843097|ref|XP_002953091.1| hypothetical protein VOLCADRAFT_63158 [Volvox carteri f.
nagariensis]
gi|300261802|gb|EFJ46013.1| hypothetical protein VOLCADRAFT_63158 [Volvox carteri f.
nagariensis]
Length = 762
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 65/124 (52%), Gaps = 5/124 (4%)
Query: 170 CKMDASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAK 229
++D+ AV +K SV H+ ++ G GS KL++RN+ F+A
Sbjct: 609 VEVDSEAVAAAVIKKLQGSVLDGHKLVLQISRGRKSAAAGAGST----KLVVRNLAFEAT 664
Query: 230 VNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIA 289
+I+ +F+P G + + +P D G +GFAFV+F K++A++A++ G R +
Sbjct: 665 KKDIQGLFNPFGHLKSCRLPKKFD-GSHRGFAFVEFVTKQEAKNALEGLAGTHLYGRRLV 723
Query: 290 VDWA 293
V++A
Sbjct: 724 VEYA 727
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
L+++N+P+ A +E+ ++F G V + +P ++ A V+F +DA +A +
Sbjct: 434 LLVKNLPYSANDDELVELFGRHGPVSRLVLPP------ARALALVEFAEPQDARAAFKSL 487
Query: 279 NGQKFGKRPIAVDWAVPKNIY 299
+K+ P+ ++WA P +++
Sbjct: 488 AYKKYHHVPLYLEWA-PADVF 507
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 2 VTKKGSNEHRGFGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSK 58
+ KK HRGF +V+F ++A A+E GT + GR++ V++A +L+ R+K
Sbjct: 683 LPKKFDGSHRGFAFVEFVTKQEAKNALEGLAGTHLYGRRLVVEYAREDDTLDDIRNK 739
Score = 38.9 bits (89), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 35/62 (56%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+ + A ++ D+F G + V++ + +T SKG A+V++ DA A ++
Sbjct: 254 RLFVRNLAYTATEADLSDLFGSFGDLQAVHLVVDRETKRSKGLAYVQYQIPEDAVRAAKQ 313
Query: 278 FN 279
+
Sbjct: 314 LD 315
>gi|192764310|gb|ACF05699.1| betaCstF-64 variant 2 [Homo sapiens]
Length = 597
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VG V + + ++ +TG KG+ F ++ + A SA++
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 78 NGREFSGRALRVDNA 92
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 20/127 (15%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR- 75
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
L GR+ + +AL +D + +E N L ++E +P
Sbjct: 76 ---------NLNGREFSG-RAL--------RVDNAASEKNKEELKSLGTGAPVIE-SPYG 116
Query: 547 EGVSDDD 553
E +S +D
Sbjct: 117 ETISPED 123
>gi|431895723|gb|ELK05144.1| Cleavage stimulation factor 64 kDa subunit [Pteropus alecto]
Length = 577
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VG V + + ++ +TG KG+ F ++ + A SA++
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 78 NGREFSGRALRVDNA 92
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 20/127 (15%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR- 75
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
L GR+ + +AL +D + +E N L ++E +P
Sbjct: 76 ---------NLNGREFSG-RAL--------RVDNAASEKNKEELKSLGTGAPVIE-SPYG 116
Query: 547 EGVSDDD 553
E +S +D
Sbjct: 117 ETISPED 123
>gi|4557493|ref|NP_001316.1| cleavage stimulation factor subunit 2 [Homo sapiens]
gi|332861154|ref|XP_003317595.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Pan
troglodytes]
gi|397478196|ref|XP_003810439.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Pan
paniscus]
gi|426396653|ref|XP_004064546.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Gorilla
gorilla gorilla]
gi|461847|sp|P33240.1|CSTF2_HUMAN RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|181139|gb|AAA35724.1| cleavage stimulation factor [Homo sapiens]
gi|17389334|gb|AAH17712.1| Cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Homo
sapiens]
gi|32879899|gb|AAP88780.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Homo
sapiens]
gi|61359609|gb|AAX41742.1| cleavage stimulation factor 3' pre-RNA subunit 2 [synthetic
construct]
gi|61359616|gb|AAX41743.1| cleavage stimulation factor 3' pre-RNA subunit 2 [synthetic
construct]
gi|119623223|gb|EAX02818.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, isoform
CRA_a [Homo sapiens]
gi|123981258|gb|ABM82458.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
[synthetic construct]
gi|123996091|gb|ABM85647.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
[synthetic construct]
gi|261860120|dbj|BAI46582.1| Cleavage stimulation factor 64 kDa subunit [synthetic construct]
gi|410256936|gb|JAA16435.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Pan
troglodytes]
gi|410289934|gb|JAA23567.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Pan
troglodytes]
Length = 577
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VG V + + ++ +TG KG+ F ++ + A SA++
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 78 NGREFSGRALRVDNA 92
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 20/127 (15%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR- 75
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
L GR+ + +AL +D + +E N L ++E +P
Sbjct: 76 ---------NLNGREFSG-RAL--------RVDNAASEKNKEELKSLGTGAPVIE-SPYG 116
Query: 547 EGVSDDD 553
E +S +D
Sbjct: 117 ETISPED 123
>gi|449544221|gb|EMD35195.1| hypothetical protein CERSUDRAFT_116663 [Ceriporiopsis subvermispora
B]
Length = 788
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 13/129 (10%)
Query: 389 SDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTI------FICNLPFDLDNEEV 442
+DK N+S +D + S + TE D L+ TI F+ NL + +EE+
Sbjct: 217 ADKVFNQSDDEADAATEGSHADDTDKVAVTE--DPLKVTILETGRLFLRNLSYTCTDEEL 274
Query: 443 KQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSASKTTSGLGIFLKGRQL 502
KQ FS +GE+ + +TK+PKG ++ F +A AA A S +GR L
Sbjct: 275 KQLFSPYGEIAQVHIPVDPLTKQPKGLAYVTFAQPSSAVAAFEALDKAS-----FQGRLL 329
Query: 503 TVLKALDKK 511
VL A+D++
Sbjct: 330 HVLPAVDRR 338
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 109/258 (42%), Gaps = 39/258 (15%)
Query: 218 KLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQK 277
+L +RN+ + E+K +FSP G + V+IP + T KG A+V F A +A +
Sbjct: 259 RLFLRNLSYTCTDEELKQLFSPYGEIAQVHIPVDPLTKQPKGLAYVTFAQPSSAVAAFEA 318
Query: 278 FNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKGDGNSDSGSDDDLGDD-DAETASDDS 336
+ F R + V AV + G + +G+G D+G L ++ DA+ +
Sbjct: 319 LDKASFQGRLLHVLPAVDRR---------GKEKEGEGAGDAGRKKTLKEERDAKRKASAG 369
Query: 337 NSSEKEDLPSNADFDEEVDIARKVLNKL-TSTTGSLPSLSDDS----ALVKGNKEQDSDK 391
L N+D + V ++L S + L SD++ AL + + Q++
Sbjct: 370 REFNWAMLYMNSD-----AVVSSVADRLHISKSEILDPTSDNAAVKLALAETHIIQETKT 424
Query: 392 TVNESAKVSDVSKLNSSKSKPKSLKQTEGEDELQNTIFICNLPFDLDNEEVKQRFSAFGE 451
+ E+ V SS S + +K+++ I + N+P+ E ++ F G
Sbjct: 425 FLEENGVVM------SSLSPGQPIKRSD------TIILVKNIPYGTSAEALRSLFEPHG- 471
Query: 452 VVSFVPVLHQVTKRPKGT 469
L +V P GT
Sbjct: 472 ------TLRRVLIPPAGT 483
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 213 KTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAE 272
K + K+I++N+PF+A +I+++FS + +V +P D ++GFAF++FT +A
Sbjct: 669 KAKGTKMIVKNVPFEATKKDIRELFSAHAQLKSVRLPRKFDH-RARGFAFLEFTTHAEAA 727
Query: 273 SAIQKFNGQKFGKRPIAVDWA 293
A R + ++WA
Sbjct: 728 RAYATLRHTHLLGRHLVLEWA 748
>gi|426335862|ref|XP_004029425.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Gorilla gorilla gorilla]
Length = 353
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
+IK F+P G + + + + TG SKG+ FV F K DAE+AIQ+ GQ G R I +
Sbjct: 88 DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN 147
Query: 292 WAV-----PKNIYSS 301
WA PK+ Y S
Sbjct: 148 WATRKPPAPKSTYES 162
>gi|84579137|dbj|BAE73002.1| hypothetical protein [Macaca fascicularis]
Length = 385
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 232 EIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVD 291
+IK F+P G + + + + TG SKG+ FV F K DAE+AIQ+ GQ G R I +
Sbjct: 121 DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN 180
Query: 292 WAV-----PKNIYSS 301
WA PK+ Y S
Sbjct: 181 WATRKPPAPKSTYES 195
>gi|410988989|ref|XP_004000752.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
2 [Felis catus]
Length = 577
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VG V + + ++ +TG KG+ F ++ + A SA++
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 78 NGREFSGRALRVDNA 92
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 20/127 (15%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR- 75
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
L GR+ + +AL +D + +E N L ++E +P
Sbjct: 76 ---------NLNGREFSG-RAL--------RVDNAASEKNKEELKSLGTGAPVIE-SPYG 116
Query: 547 EGVSDDD 553
E +S +D
Sbjct: 117 ETISPED 123
>gi|355681345|gb|AER96778.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Mustela
putorius furo]
Length = 582
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VG V + + ++ +TG KG+ F ++ + A SA++
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 78 NGREFSGRALRVDNA 92
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 20/127 (15%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR- 75
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
L GR+ + +AL +D + +E N L ++E +P
Sbjct: 76 ---------NLNGREFSG-RAL--------RVDNAASEKNKEELKSLGTGAPVIE-SPYG 116
Query: 547 EGVSDDD 553
E +S +D
Sbjct: 117 ETISPED 123
>gi|332254744|ref|XP_003276492.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2
[Nomascus leucogenys]
Length = 597
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VG V + + ++ +TG KG+ F ++ + A SA++
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 78 NGREFSGRALRVDNA 92
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 20/127 (15%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR- 75
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
L GR+ + +AL +D + +E N L ++E +P
Sbjct: 76 ---------NLNGREFSG-RAL--------RVDNAASEKNKEELKSLGTGAPVIE-SPYG 116
Query: 547 EGVSDDD 553
E +S +D
Sbjct: 117 ETISPED 123
>gi|301788318|ref|XP_002929575.1| PREDICTED: cleavage stimulation factor subunit 2-like [Ailuropoda
melanoleuca]
Length = 582
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VG V + + ++ +TG KG+ F ++ + A SA++
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 78 NGREFSGRALRVDNA 92
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 20/127 (15%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR- 75
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
L GR+ + +AL +D + +E N L ++E +P
Sbjct: 76 ---------NLNGREFSG-RAL--------RVDNAASEKNKEELKSLGTGAPVIE-SPYG 116
Query: 547 EGVSDDD 553
E +S +D
Sbjct: 117 ETISPED 123
>gi|124021728|ref|YP_001016035.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. MIT 9303]
gi|123962014|gb|ABM76770.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. MIT 9303]
Length = 202
Score = 56.2 bits (134), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + N+PF+A+ ++ ++F+P G V N +P DTG +GFAFV+ + +AI+
Sbjct: 3 IFVGNLPFRAEQEDVIELFAPFGEVANCALPLERDTGRKRGFAFVEMADESAEPAAIEAL 62
Query: 279 NGQKFGKRPIAVDWAVPK 296
G + RP+ ++ A P+
Sbjct: 63 QGAEMMGRPLRINKAEPR 80
Score = 44.3 bits (103), Expect = 0.19, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
+IF+ NLPF + E+V + F+ FGEV + L + T R +G F++ A AA+ A
Sbjct: 2 SIFVGNLPFRAEQEDVIELFAPFGEVANCALPLERDTGRKRGFAFVEMADESAEPAAIEA 61
Query: 487 SKTTSGLGIFLKGRQLTVLKA 507
+ G + GR L + KA
Sbjct: 62 LQ-----GAEMMGRPLRINKA 77
>gi|426223062|ref|XP_004005698.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Ovis aries]
Length = 607
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VG V + + ++ +TG KG+ F ++ + A SA++
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 78 NGREFSGRALRVDNA 92
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAV 484
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74
>gi|74007936|ref|XP_549135.2| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Canis
lupus familiaris]
Length = 597
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 219 LIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKF 278
+ + NIP++A ++KD+FS VG V + + ++ +TG KG+ F ++ + A SA++
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 279 NGQKFGKRPIAVDWA 293
NG++F R + VD A
Sbjct: 78 NGREFSGRALRVDNA 92
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 20/127 (15%)
Query: 427 TIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEAATAAVSA 486
++F+ N+P++ E++K FS G VVSF V + T +PKG GF +++ E A +A+
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR- 75
Query: 487 SKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLILEGTPAA 546
L GR+ + +AL +D + +E N L ++E +P
Sbjct: 76 ---------NLNGREFSG-RAL--------RVDNAASEKNKEELKSLGTGAPVIE-SPYG 116
Query: 547 EGVSDDD 553
E +S +D
Sbjct: 117 ETISPED 123
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.129 0.360
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,280,359,686
Number of Sequences: 23463169
Number of extensions: 439563971
Number of successful extensions: 1855431
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 11790
Number of HSP's successfully gapped in prelim test: 8431
Number of HSP's that attempted gapping in prelim test: 1643508
Number of HSP's gapped (non-prelim): 150985
length of query: 676
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 526
effective length of database: 8,839,720,017
effective search space: 4649692728942
effective search space used: 4649692728942
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 81 (35.8 bits)