Your job contains 1 sequence.
>005815
MSPAVSLSISHLPICKSQDVAKDTHIPKSTFRESPFHKTPTDVKLSKRKLLNSTALGLLG
GLSLAQPAKSTEPESPIEYTSNRMTYSRFLQYLDEGSVKKVDLFENGNVAIAEIFNQALD
KIQRVKVQLPGLPQELLRKMKEKNVDFAARPMEMNWGVSLLDFLANFGFPLLLLGSLFLR
SSSVNSPGGPNLPFGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFA
AVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFN
KAKANSPCLVFIDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFTGNSGVIVIAATN
RPEILDSALHRPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSG
ADLANLMNEAAILAGRRGKANITLKEIDDSIDRIVAGMEGTKMTDGKNKILVAYHEIGHA
VCATLTPGHDPVQKVTLIPRGQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVI
FGEAEITTGAAGDLQQITQIARQMVTRYGMSEIGPWTLIDPSVQSSDVVMRMLARNSMSE
KLADDIDKTVRNIIESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVLSEFTDV
SADQVDRTPIRELISA
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005815
(676 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2009235 - symbol:FTSH8 "FTSH protease 8" speci... 2163 4.6e-224 1
TAIR|locus:2052806 - symbol:VAR2 "VARIEGATED 2" species:3... 2163 4.6e-224 1
UNIPROTKB|Q55700 - symbol:ftsH2 "ATP-dependent zinc metal... 1755 7.8e-181 1
TAIR|locus:2157637 - symbol:VAR1 "VARIEGATED 1" species:3... 1362 3.5e-139 1
TAIR|locus:2011952 - symbol:FTSH1 "FTSH protease 1" speci... 1348 1.1e-137 1
TIGR_CMR|GSU_1809 - symbol:GSU_1809 "cell division protei... 1277 3.5e-130 1
UNIPROTKB|Q3AFJ8 - symbol:ftsH "ATP-dependent zinc metall... 1265 6.6e-129 1
TIGR_CMR|CHY_0214 - symbol:CHY_0214 "cell division protei... 1265 6.6e-129 1
TIGR_CMR|BA_0064 - symbol:BA_0064 "cell division protein ... 1255 7.6e-128 1
UNIPROTKB|P37476 - symbol:ftsH "ATP-dependent zinc metall... 1248 4.2e-127 1
UNIPROTKB|Q9KU86 - symbol:ftsH "ATP-dependent zinc metall... 1234 1.3e-125 1
TIGR_CMR|VC_0637 - symbol:VC_0637 "cell division protein ... 1234 1.3e-125 1
UNIPROTKB|P0AAI3 - symbol:ftsH species:83333 "Escherichia... 1223 1.9e-124 1
TIGR_CMR|CBU_1352 - symbol:CBU_1352 "ATP-dependent metall... 1223 1.9e-124 1
TIGR_CMR|CPS_3452 - symbol:CPS_3452 "ATP-dependent metall... 1223 1.9e-124 1
TIGR_CMR|SO_1197 - symbol:SO_1197 "ATP-dependent metallop... 1221 3.0e-124 1
TIGR_CMR|NSE_0423 - symbol:NSE_0423 "ATP-dependent metall... 1194 2.2e-121 1
UNIPROTKB|Q5LNU8 - symbol:ftsH "ATP-dependent zinc metall... 1190 5.8e-121 1
TIGR_CMR|SPO_3105 - symbol:SPO_3105 "ATP-dependent metall... 1190 5.8e-121 1
TIGR_CMR|DET_0391 - symbol:DET_0391 "ATP-dependent metall... 1177 1.4e-119 1
UNIPROTKB|Q2GFA1 - symbol:ftsH "ATP-dependent zinc metall... 1167 1.6e-118 1
TIGR_CMR|ECH_1098 - symbol:ECH_1098 "ATP-dependent metall... 1167 1.6e-118 1
UNIPROTKB|Q2GIT4 - symbol:ftsH "ATP-dependent zinc metall... 1143 5.6e-116 1
TIGR_CMR|APH_1179 - symbol:APH_1179 "ATP-dependent metall... 1143 5.6e-116 1
UNIPROTKB|P0C5C0 - symbol:ftsH "ATP-dependent zinc metall... 1131 1.0e-114 1
TIGR_CMR|CJE_1259 - symbol:CJE_1259 "cell division protei... 1130 1.3e-114 1
TIGR_CMR|GSU_1180 - symbol:GSU_1180 "cell division protei... 1120 1.5e-113 1
DICTYBASE|DDB_G0284249 - symbol:DDB_G0284249 "peptidase M... 1053 3.1e-108 2
ASPGD|ASPL0000029469 - symbol:AN5588 species:162425 "Emer... 1031 4.5e-107 2
TAIR|locus:2057386 - symbol:ftsh4 "FTSH protease 4" speci... 1040 4.6e-105 1
CGD|CAL0000075 - symbol:AFG3 species:5476 "Candida albica... 678 5.8e-105 2
UNIPROTKB|Q5AJC2 - symbol:AFG3 "Putative uncharacterized ... 678 5.8e-105 2
TAIR|locus:2075581 - symbol:ftsh7 "FTSH protease 7" speci... 1010 7.3e-105 2
FB|FBgn0036702 - symbol:CG6512 species:7227 "Drosophila m... 1037 9.5e-105 1
ASPGD|ASPL0000072959 - symbol:AN4557 species:162425 "Emer... 1035 1.6e-104 1
CGD|CAL0004443 - symbol:orf19.2057 species:5476 "Candida ... 1035 1.6e-104 1
POMBASE|SPBC543.09 - symbol:yta12 "mitochondrial m-AAA pr... 1035 1.6e-104 1
TAIR|locus:2066128 - symbol:ftsh3 "FTSH protease 3" speci... 1006 2.8e-103 2
MGI|MGI:1351651 - symbol:Yme1l1 "YME1-like 1 (S. cerevisi... 1021 4.7e-103 1
UNIPROTKB|G3V886 - symbol:Yme1l1 "YME1-like 1 (S. cerevis... 1021 4.7e-103 1
UNIPROTKB|F1NTK8 - symbol:YME1L1 "Uncharacterized protein... 1019 7.7e-103 1
UNIPROTKB|F1P519 - symbol:YME1L1 "Uncharacterized protein... 1019 7.7e-103 1
DICTYBASE|DDB_G0272120 - symbol:rcaA "peptidase M41, FtsH... 1018 9.8e-103 1
UNIPROTKB|F1PRV6 - symbol:YME1L1 "Uncharacterized protein... 1017 1.3e-102 1
UNIPROTKB|F1RVK1 - symbol:YME1L1 "Uncharacterized protein... 1017 1.3e-102 1
UNIPROTKB|Q96TA2 - symbol:YME1L1 "ATP-dependent zinc meta... 1016 1.6e-102 1
SGD|S000000819 - symbol:AFG3 "Component, with Yta12p, of ... 1016 1.6e-102 1
WB|WBGene00004978 - symbol:spg-7 species:6239 "Caenorhabd... 1016 1.6e-102 1
SGD|S000004695 - symbol:YTA12 "Component of the mitochond... 1010 6.9e-102 1
RGD|620764 - symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" ... 1008 1.1e-101 1
GENEDB_PFALCIPARUM|PF14_0616 - symbol:PF14_0616 "i-AAA pr... 987 1.4e-101 2
UNIPROTKB|Q8IKI9 - symbol:PF14_0616 "ATP-dependent protea... 987 1.4e-101 2
UNIPROTKB|A6QR12 - symbol:YME1L1 "Uncharacterized protein... 1007 1.4e-101 1
UNIPROTKB|J9NRR9 - symbol:YME1L1 "Uncharacterized protein... 1006 1.8e-101 1
TAIR|locus:2154568 - symbol:ftsh9 "FTSH protease 9" speci... 999 1.0e-100 1
UNIPROTKB|E1BFQ0 - symbol:E1BFQ0 "Uncharacterized protein... 995 2.7e-100 1
TAIR|locus:2025052 - symbol:ftsh10 "FTSH protease 10" spe... 994 3.4e-100 1
ZFIN|ZDB-GENE-070410-25 - symbol:yme1l1b "YME1-like 1b" s... 994 3.4e-100 1
UNIPROTKB|Q9Y4W6 - symbol:AFG3L2 "AFG3-like protein 2" sp... 993 4.4e-100 1
UNIPROTKB|F1LN92 - symbol:Afg3l2 "Protein Afg3l2" species... 993 4.4e-100 1
MGI|MGI:1916847 - symbol:Afg3l2 "AFG3(ATPase family gene ... 992 5.6e-100 1
ZFIN|ZDB-GENE-070912-46 - symbol:afg3l2 "AFG3 ATPase fami... 992 5.6e-100 1
UNIPROTKB|E1BZ74 - symbol:AFG3L2 "Uncharacterized protein... 990 9.1e-100 1
UNIPROTKB|F1N9N5 - symbol:AFG3L2 "Uncharacterized protein... 990 9.1e-100 1
UNIPROTKB|E2QYF3 - symbol:AFG3L2 "Uncharacterized protein... 990 9.1e-100 1
MGI|MGI:1928277 - symbol:Afg3l1 "AFG3(ATPase family gene ... 989 1.2e-99 1
UNIPROTKB|Q2KJI7 - symbol:AFG3L2 "AFG3-like protein 2" sp... 986 2.4e-99 1
RGD|1309722 - symbol:Afg3l1 "AFG3(ATPase family gene 3)-l... 984 3.9e-99 1
ZFIN|ZDB-GENE-091113-41 - symbol:yme1l1a "YME1-like 1a" s... 983 5.0e-99 1
TAIR|locus:2163736 - symbol:FTSH11 "FTSH protease 11" spe... 976 2.8e-98 1
FB|FBgn0034792 - symbol:CG3499 species:7227 "Drosophila m... 968 2.0e-97 1
WB|WBGene00010842 - symbol:ymel-1 species:6239 "Caenorhab... 968 2.0e-97 1
CGD|CAL0002950 - symbol:YME1 species:5476 "Candida albica... 960 1.4e-96 1
SGD|S000006228 - symbol:YME1 "Catalytic subunit of the mi... 943 8.7e-95 1
FB|FBgn0024992 - symbol:CG2658 species:7227 "Drosophila m... 941 1.4e-94 1
GENEDB_PFALCIPARUM|PFL1925w - symbol:PFL1925w "cell divis... 930 2.1e-93 1
UNIPROTKB|Q8I526 - symbol:PFL1925w "Cell division protein... 930 2.1e-93 1
POMBASE|SPCC965.04c - symbol:SPCC965.04c "mitochondrial i... 929 2.7e-93 1
UNIPROTKB|I3LLQ8 - symbol:AFG3L2 "Uncharacterized protein... 917 5.0e-92 1
UNIPROTKB|A7E2Z6 - symbol:SPG7 "SPG7 protein" species:991... 902 1.9e-90 1
DICTYBASE|DDB_G0293388 - symbol:DDB_G0293388 "ATP-depende... 889 4.6e-89 1
MGI|MGI:2385906 - symbol:Spg7 "spastic paraplegia 7 homol... 887 7.5e-89 1
DICTYBASE|DDB_G0267492 - symbol:DDB_G0267492 "peptidase M... 886 9.6e-89 1
UNIPROTKB|Q9UQ90 - symbol:SPG7 "Paraplegin" species:9606 ... 885 1.2e-88 1
UNIPROTKB|E2R4F3 - symbol:SPG7 "Uncharacterized protein" ... 884 1.6e-88 1
ZFIN|ZDB-GENE-030131-5391 - symbol:spg7 "spastic parapleg... 882 2.5e-88 1
UNIPROTKB|F1NXP0 - symbol:SPG7 "Uncharacterized protein" ... 874 1.8e-87 1
WB|WBGene00021425 - symbol:ppgn-1 species:6239 "Caenorhab... 837 1.5e-83 1
RGD|727940 - symbol:Spg7 "spastic paraplegia 7 homolog (h... 561 9.5e-80 2
UNIPROTKB|Q7TT47 - symbol:Spg7 "Paraplegin" species:10116... 561 9.5e-80 2
TAIR|locus:2138146 - symbol:FtsHi1 "FTSH inactive proteas... 760 2.1e-75 1
TAIR|locus:2076929 - symbol:AT3G02450 species:3702 "Arabi... 730 8.5e-75 2
TAIR|locus:2094892 - symbol:EMB2083 "embryo defective 208... 701 1.2e-71 2
TIGR_CMR|CJE_1085 - symbol:CJE_1085 "cell division protei... 688 6.8e-71 2
TAIR|locus:2174819 - symbol:EMB3144 "EMBRYO DEFECTIVE 314... 690 5.6e-68 1
TIGR_CMR|CPS_1798 - symbol:CPS_1798 "ATP-dependent peptid... 608 3.8e-58 1
TIGR_CMR|CPS_1795 - symbol:CPS_1795 "ATP-dependent peptid... 594 1.2e-56 1
TAIR|locus:2206380 - symbol:FTSH12 "FTSH protease 12" spe... 556 2.7e-54 2
UNIPROTKB|Q58576 - symbol:pan "Proteasome-activating nucl... 555 1.1e-53 1
WB|WBGene00008053 - symbol:cdc-48.2 species:6239 "Caenorh... 513 1.0e-51 2
WARNING: Descriptions of 629 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2009235 [details] [associations]
symbol:FTSH8 "FTSH protease 8" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=TAS] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AC007592
eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798 GO:GO:0010304
ProtClustDB:CLSN2679937 EMBL:AF419565 EMBL:BT002649 EMBL:BT003813
EMBL:AY045951 IPI:IPI00539195 RefSeq:NP_563766.3 UniGene:At.17054
ProteinModelPortal:Q8W585 SMR:Q8W585 STRING:Q8W585 MEROPS:M41.025
PaxDb:Q8W585 PRIDE:Q8W585 ProMEX:Q8W585 EnsemblPlants:AT1G06430.1
GeneID:837154 KEGG:ath:AT1G06430 GeneFarm:2474 TAIR:At1g06430
InParanoid:Q8W585 OMA:NANADEQ PhylomeDB:Q8W585
Genevestigator:Q8W585 Uniprot:Q8W585
Length = 685
Score = 2163 (766.5 bits), Expect = 4.6e-224, P = 4.6e-224
Identities = 418/586 (71%), Positives = 491/586 (83%)
Query: 80 TSNRMTYSRFLQYLDEGSVKKVDLFENGNVAIAEIFNQAL-DKIQRVKVQLPGLPQELLR 138
+S+RM+YSRFL+YLD+G V+KVDL+ENG +AI E + L ++IQRV+VQLPGL QELL+
Sbjct: 81 SSSRMSYSRFLEYLDKGRVEKVDLYENGTIAIVEAVSPELGNRIQRVRVQLPGLSQELLQ 140
Query: 139 KMKEKNVDFAARPMEMNWGVSLLDFLANFGFPXXXXXX----XXXXXXXVNSPGGPNLPF 194
K++ KN+DFAA + + G +L+ + N FP + PGGP P
Sbjct: 141 KLRAKNIDFAAHNAQEDQGSPILNLIGNLAFPVILIGGLFLLSRRSSGGMGGPGGPGFPL 200
Query: 195 GLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVG 254
+G+SKAKF+MEPNTGVTFDDVAGVDEAKQDF E+V+FL+ PE+F AVGA+IPKGVLLVG
Sbjct: 201 QIGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVG 260
Query: 255 PPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDE 314
PPGTGKTLLAKAIAGEAGVPFFS+SGSEF+EMFVGVGASRVRDLF KAK N+PC+VF+DE
Sbjct: 261 PPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDE 320
Query: 315 IDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGR 374
IDAV NDEREQTLNQLLTEMDGF GN+GVIV+AATNR +ILDSAL RPGR
Sbjct: 321 IDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGR 380
Query: 375 FDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILA 434
FDRQVSV +PD++GR ILKVHS NKK + VSL VIA RTPGFSGADLANL+NEAAILA
Sbjct: 381 FDRQVSVDVPDVKGRTDILKVHSGNKKFESGVSLEVIAMRTPGFSGADLANLLNEAAILA 440
Query: 435 GRRGKANITLKEIDDSIDRIVAGMEGTKMTDGKNKILVAYHEIGHAVCATLTPGHDPVQK 494
GRRGK I+ KEIDDSIDRIVAGMEGT MTDGK+K LVAYHE+GHA+C TLTPGHD VQK
Sbjct: 441 GRRGKTAISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEVGHAICGTLTPGHDAVQK 500
Query: 495 VTLIPRGQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDL 554
VTLIPRGQARGLTWF+P +DP LISKQQLFARIVGGLGGRAAEEVIFGE+E+TTGA DL
Sbjct: 501 VTLIPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGESEVTTGAVSDL 560
Query: 555 QQITQIARQMVTRYGMSEIGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNII 614
QQIT +A+QMVT +GMSEIGPW+L+D S QS DV+MRM+ARNSMSEKLA+DID V+ +
Sbjct: 561 QQITGLAKQMVTTFGMSEIGPWSLMDSSEQS-DVIMRMMARNSMSEKLANDIDTAVKTLS 619
Query: 615 ESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVLSEFTDV 660
+ AYE+A + IRNNREA+DK+V++L+EKET+SGDEFRA+LSEFT++
Sbjct: 620 DKAYEIALSQIRNNREAMDKIVEILLEKETMSGDEFRAILSEFTEI 665
>TAIR|locus:2052806 [details] [associations]
symbol:VAR2 "VARIEGATED 2" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010027
"thylakoid membrane organization" evidence=RCA;IMP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0010205 "photoinhibition"
evidence=IMP] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA;TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0030163 "protein catabolic
process" evidence=IDA] [GO:0072593 "reactive oxygen species
metabolic process" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0010206
"photosystem II repair" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0008237 GO:GO:0004222 EMBL:AC004669
GO:GO:0010027 GO:GO:0072593 GO:GO:0010205 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0031977
GO:GO:0004176 GO:GO:0010206 HOGENOM:HOG000217276 KO:K03798
GO:GO:0010304 EMBL:AF135189 EMBL:AY045599 EMBL:AY093791
EMBL:AK221155 IPI:IPI00546467 PIR:F84714 RefSeq:NP_850156.1
UniGene:At.22024 UniGene:At.71129 UniGene:At.75189
ProteinModelPortal:O80860 SMR:O80860 IntAct:O80860 STRING:O80860
MEROPS:M41.005 World-2DPAGE:0003:O80860 PaxDb:O80860 PRIDE:O80860
ProMEX:O80860 EnsemblPlants:AT2G30950.1 GeneID:817646
KEGG:ath:AT2G30950 GeneFarm:2504 TAIR:At2g30950 InParanoid:O80860
OMA:LEIIAMR PhylomeDB:O80860 ProtClustDB:CLSN2679937
Genevestigator:O80860 Uniprot:O80860
Length = 695
Score = 2163 (766.5 bits), Expect = 4.6e-224, P = 4.6e-224
Identities = 417/595 (70%), Positives = 494/595 (83%)
Query: 80 TSNRMTYSRFLQYLDEGSVKKVDLFENGNVAIAEIFNQAL-DKIQRVKVQLPGLPQELLR 138
+S+RM+YSRFL+YLD+ V KVDL+ENG +AI E + L ++++RV+VQLPGL QELL+
Sbjct: 88 SSSRMSYSRFLEYLDKDRVNKVDLYENGTIAIVEAVSPELGNRVERVRVQLPGLSQELLQ 147
Query: 139 KMKEKNVDFAARPMEMNWGVSLLDFLANFGFPXXXXXX----XXXXXXXVNSPGGPNLPF 194
K++ KN+DFAA + + G L + + N FP + PGGP P
Sbjct: 148 KLRAKNIDFAAHNAQEDQGSVLFNLIGNLAFPALLIGGLFLLSRRSGGGMGGPGGPGNPL 207
Query: 195 GLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVG 254
G+SKAKF+MEPNTGVTFDDVAGVDEAKQDF E+V+FL+ PE+F AVGAKIPKGVLL+G
Sbjct: 208 QFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGAKIPKGVLLIG 267
Query: 255 PPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDE 314
PPGTGKTLLAKAIAGEAGVPFFS+SGSEF+EMFVGVGASRVRDLF KAK N+PC+VF+DE
Sbjct: 268 PPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDE 327
Query: 315 IDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGR 374
IDAV NDEREQTLNQLLTEMDGF GN+GVIV+AATNR +ILDSAL RPGR
Sbjct: 328 IDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGR 387
Query: 375 FDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILA 434
FDRQVSV +PD++GR ILKVH+ NKK D DVSL +IA RTPGFSGADLANL+NEAAILA
Sbjct: 388 FDRQVSVDVPDVKGRTDILKVHAGNKKFDNDVSLEIIAMRTPGFSGADLANLLNEAAILA 447
Query: 435 GRRGKANITLKEIDDSIDRIVAGMEGTKMTDGKNKILVAYHEIGHAVCATLTPGHDPVQK 494
GRR + +I+ KEIDDSIDRIVAGMEGT MTDGK+K LVAYHE+GHAVC TLTPGHD VQK
Sbjct: 448 GRRARTSISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEVGHAVCGTLTPGHDAVQK 507
Query: 495 VTLIPRGQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDL 554
VTLIPRGQARGLTWF+P +DP LISKQQLFARIVGGLGGRAAEE+IFG++E+TTGA GDL
Sbjct: 508 VTLIPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEIIFGDSEVTTGAVGDL 567
Query: 555 QQITQIARQMVTRYGMSEIGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNII 614
QQIT +ARQMVT +GMS+IGPW+L+D S QS DV+MRM+ARNSMSEKLA+DID V+ +
Sbjct: 568 QQITGLARQMVTTFGMSDIGPWSLMDSSAQS-DVIMRMMARNSMSEKLAEDIDSAVKKLS 626
Query: 615 ESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVLSEFTDVSADQVDRTP 669
+SAYE+A +HI+NNREA+DKLV+VL+EKET+ GDEFRA+LSEFT++ + +R P
Sbjct: 627 DSAYEIALSHIKNNREAMDKLVEVLLEKETIGGDEFRAILSEFTEIPPE--NRVP 679
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 1755 (622.8 bits), Expect = 7.8e-181, P = 7.8e-181
Identities = 341/583 (58%), Positives = 436/583 (74%)
Query: 80 TSN-RMTYSRFLQYLDEGSVKKVDLFENGNVAIAEIFNQALDKIQRVKVQLPGLPQELLR 138
T+N RMTY RFL+Y+D G + VDL+ENG AI ++ + +D+ R +V LP EL+
Sbjct: 38 TANTRMTYGRFLEYVDAGRITSVDLYENGRTAIVQVSDPEVDRTLRSRVDLPTNAPELIA 97
Query: 139 KMKEKNVDFAARPMEMNWGVSLLDFLANFGFPXXXXXXXXXXXX-XVNSPGGPNLPFGLG 197
++++ N+ + P+ N G+ + F+ N FP N PGGP G
Sbjct: 98 RLRDSNIRLDSHPVRNN-GM-VWGFVGNLIFPVLLIASLFFLFRRSSNMPGGPGQAMNFG 155
Query: 198 RSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPG 257
+SKA+F+M+ TGV FDDVAG+DEAK++ QE+V FL+ PE+F AVGAKIPKGVLLVGPPG
Sbjct: 156 KSKARFQMDAKTGVMFDDVAGIDEAKEELQEVVTFLKQPERFTAVGAKIPKGVLLVGPPG 215
Query: 258 TGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDA 317
TGKTLLAKAIAGEAGVPFFS+SGSEF+EMFVGVGASRVRDLF KAK N+PCL+FIDEIDA
Sbjct: 216 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDA 275
Query: 318 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDR 377
V NDEREQTLNQLLTEMDGF GN+G+I+IAATNRP++LDSAL RPGRFDR
Sbjct: 276 VGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDR 335
Query: 378 QVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRR 437
QV V PD GR++IL+VH+ NKKL +VS+ IA RTPGFSGADLANL+NEAAIL RR
Sbjct: 336 QVMVDAPDYSGRKEILEVHARNKKLAPEVSIDSIARRTPGFSGADLANLLNEAAILTARR 395
Query: 438 GKANITLKEIDDSIDRIVAGMEGTKMTDGKNKILVAYHEIGHAVCATLTPGHDPVQKVTL 497
K+ ITL EIDD++DR+VAGMEGT + D K+K L+AYHE+GHA+ TL HDPVQKVTL
Sbjct: 396 RKSAITLLEIDDAVDRVVAGMEGTPLVDSKSKRLIAYHEVGHAIVGTLLKDHDPVQKVTL 455
Query: 498 IPRGQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQI 557
IPRGQA+GLTWF P E+ L +K QL ARI G +GGRAAEE +FG+ E+TTGA GDLQQ+
Sbjct: 456 IPRGQAQGLTWFTPNEEQGLTTKAQLMARIAGAMGGRAAEEEVFGDDEVTTGAGGDLQQV 515
Query: 558 TQIARQMVTRYGMSEIGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIESA 617
T++ARQMVTR+GMS +GP +L + S + ++ R+ SE++A ID VR + E
Sbjct: 516 TEMARQMVTRFGMSNLGPISL-ESSGGEVFLGGGLMNRSEYSEEVATRIDAQVRQLAEQG 574
Query: 618 YEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVLSEFTDV 660
+++A+ ++ RE +D+LVD+L+EKET+ G+EFR +++E+ +V
Sbjct: 575 HQMARKIVQEQREVVDRLVDLLIEKETIDGEEFRQIVAEYAEV 617
>TAIR|locus:2157637 [details] [associations]
symbol:VAR1 "VARIEGATED 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA;IDA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=RCA;TAS] [GO:0009579 "thylakoid" evidence=IDA] [GO:0010205
"photoinhibition" evidence=IMP] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009773 "photosynthetic electron transport in photosystem I"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0007275 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0006508 GO:GO:0009941
GO:GO:0004222 GO:GO:0016887 EMBL:AB023032 GO:GO:0010205
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0009535
HOGENOM:HOG000217276 KO:K03798 ProtClustDB:CLSN2688633
GO:GO:0010304 EMBL:AY126987 IPI:IPI00517420 RefSeq:NP_568604.1
UniGene:At.21670 UniGene:At.66720 ProteinModelPortal:Q9FH02
SMR:Q9FH02 STRING:Q9FH02 MEROPS:M41.024 PaxDb:Q9FH02 PRIDE:Q9FH02
EnsemblPlants:AT5G42270.1 GeneID:834232 KEGG:ath:AT5G42270
GeneFarm:4746 TAIR:At5g42270 InParanoid:Q9FH02 OMA:RARASMP
PhylomeDB:Q9FH02 Genevestigator:Q9FH02 GermOnline:AT5G42270
Uniprot:Q9FH02
Length = 704
Score = 1362 (484.5 bits), Expect = 3.5e-139, P = 3.5e-139
Identities = 296/587 (50%), Positives = 383/587 (65%)
Query: 86 YSRFLQYLDEGSVKKVDLFENGNVAIAEIFNQALDKIQRVKVQLPGLPQELLRKMKEKNV 145
YS FL + +G V++V ++G+V ++ A+D +R V +P P +L+ + V
Sbjct: 126 YSEFLNAVKKGKVERVKFSKDGSVL--QL--TAVDN-RRATVIVPNDP-DLIDILAMNGV 179
Query: 146 DFAARPMEMNWGVSLLDFLANFGFPXXXXXXXXXXXXX----VNSPGGPNLPFGLGRSKA 201
D + E G L DF+ N FP PGG P GRSK+
Sbjct: 180 DISVS--EGEGGNGLFDFIGNLLFPLLAFGGLFYLFRGGQGGAGGPGGLGGPMDFGRSKS 237
Query: 202 KFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKT 261
KF+ P TGVTF DVAG D+AK + QE+V FL+ P+K+ A+GAKIPKG LLVGPPGTGKT
Sbjct: 238 KFQEVPETGVTFGDVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKT 297
Query: 262 LLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXX 321
LLA+A+AGEAGVPFFS + SEF+E+FVGVGASRVRDLF KAK+ +PC+VFIDEIDAV
Sbjct: 298 LLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQ 357
Query: 322 XXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSV 381
NDEREQT+NQLLTEMDGF+GNSGVIV+AATNRP++LDSAL RPGRFDRQV+V
Sbjct: 358 RGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTV 417
Query: 382 GLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKAN 441
PD+ GR QILKVHS K + KDV +A RTPGF+GADL NLMNEAAILA RR
Sbjct: 418 DRPDVAGRVQILKVHSRGKAIGKDVDYEKVARRTPGFTGADLQNLMNEAAILAARRELKE 477
Query: 442 ITLKEIDDSIDRIVAGMEGTK-MTDGKNKILVAYHEIGHAVCATLTPGHDPVQKVTLIPR 500
I+ EI D+++RI+AG E + + K LVAYHE GHA+ L P +DPV K+++IPR
Sbjct: 478 ISKDEISDALERIIAGPEKKNAVVSEEKKRLVAYHEAGHALVGALMPEYDPVAKISIIPR 537
Query: 501 GQARGLTWFLPEED---PALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQI 557
GQA GLT+F P E+ L S+ L ++ LGGR AEEVIFG+ +TTGA+ D Q+
Sbjct: 538 GQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQV 597
Query: 558 TQIARQMVTRYGMSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIES 616
+++ARQMV R+G S+ IG + + + + M ++ S AD +D VR ++E
Sbjct: 598 SRVARQMVERFGFSKKIGQ-VAVGGAGGNPFLGQSMSSQKDYSMATADVVDAEVRELVEK 656
Query: 617 AYEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVLSEFTDVSAD 663
AY AK I + + KL +L+EKET+ G+EF +S F D A+
Sbjct: 657 AYVRAKEIITTQIDILHKLAQLLIEKETVDGEEF---MSLFIDGQAE 700
>TAIR|locus:2011952 [details] [associations]
symbol:FTSH1 "FTSH protease 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0031977
"thylakoid lumen" evidence=IDA] [GO:0010206 "photosystem II repair"
evidence=TAS] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0007275
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 eggNOG:COG0465
TIGRFAMs:TIGR01241 GO:GO:0009535 GO:GO:0031977 GO:GO:0004176
GO:GO:0010206 EMBL:AC007980 EMBL:X99808 EMBL:AY091095 EMBL:AY123034
EMBL:Y12780 IPI:IPI00518805 PIR:G96538 RefSeq:NP_564563.1
UniGene:At.21777 ProteinModelPortal:Q39102 SMR:Q39102 STRING:Q39102
MEROPS:M41.020 PaxDb:Q39102 PRIDE:Q39102 EnsemblPlants:AT1G50250.1
GeneID:841447 KEGG:ath:AT1G50250 GeneFarm:2667 TAIR:At1g50250
HOGENOM:HOG000217276 InParanoid:Q39102 KO:K03798 OMA:GGNPAMN
PhylomeDB:Q39102 ProtClustDB:CLSN2688633 Genevestigator:Q39102
GermOnline:AT1G50250 GO:GO:0010304 Uniprot:Q39102
Length = 716
Score = 1348 (479.6 bits), Expect = 1.1e-137, P = 1.1e-137
Identities = 294/605 (48%), Positives = 391/605 (64%)
Query: 69 KSTEPESPIEYTSNRMTYSRFLQYLDEGSVKKVDLFENGNVAIAEIFNQALDKIQRVKVQ 128
K+ P+S ++ YS FL + +G V++V ++G+V ++ A+D +R V
Sbjct: 119 KAPSPKSSDLPEGSQWRYSEFLNAVKKGKVERVRFSKDGSVV--QL--TAVDN-RRASVI 173
Query: 129 LPGLPQELLRKMKEKNVDFAARPMEMNWGVSLLDFLANFGFPXXXXXXXXXXXXXVNS-- 186
+P P +L+ + VD + E + G L + N FP
Sbjct: 174 VPNDP-DLIDILAMNGVDISVSEGESS-GNDLFTVIGNLIFPLLAFGGLFLLFRRAQGGP 231
Query: 187 ---PGGPNLPFGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVG 243
PGG P GRSK+KF+ P TGV+F DVAG D+AK + QE+V FL+ P+K+ A+G
Sbjct: 232 GGGPGGLGGPMDFGRSKSKFQEVPETGVSFADVAGADQAKLELQEVVDFLKNPDKYTALG 291
Query: 244 AKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAK 303
AKIPKG LLVGPPGTGKTLLA+A+AGEAGVPFFS + SEF+E+FVGVGASRVRDLF KAK
Sbjct: 292 AKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAK 351
Query: 304 ANSPCLVFIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPE 363
+ +PC+VFIDEIDAV NDEREQT+NQLLTEMDGF+GNSGVIV+AATNRP+
Sbjct: 352 SKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPD 411
Query: 364 ILDSALHRPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADL 423
+LDSAL RPGRFDRQV+V PD+ GR +IL+VHS K L KDV +A RTPGF+GADL
Sbjct: 412 VLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALGKDVDFDKVARRTPGFTGADL 471
Query: 424 ANLMNEAAILAGRRGKANITLKEIDDSIDRIVAGMEGTK-MTDGKNKILVAYHEIGHAVC 482
NLMNEAAILA RR I+ EI D+++RI+AG E + + K LVAYHE GHA+
Sbjct: 472 QNLMNEAAILAARRELKEISKDEISDALERIIAGPEKKNAVVSEEKKRLVAYHEAGHALV 531
Query: 483 ATLTPGHDPVQKVTLIPRGQARGLTWFLPEED---PALISKQQLFARIVGGLGGRAAEEV 539
L P +DPV K+++IPRGQA GLT+F P E+ L S+ L ++ LGGR AEEV
Sbjct: 532 GALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 591
Query: 540 IFGEAEITTGAAGDLQQITQIARQMVTRYGMSE-IGPWTLIDPSVQSSDVVMRMLARNSM 598
IFG+ +TTGA+ D Q++++ARQM+ R+G S+ IG + P + + +M ++
Sbjct: 592 IFGDENVTTGASNDFMQVSRVARQMIERFGFSKKIGQVAVGGPG-GNPFMGQQMSSQKDY 650
Query: 599 SEKLADDIDKTVRNIIESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVLSEFT 658
S AD +D VR ++E AY+ A I + + + KL +L+EKET+ G+EF +S F
Sbjct: 651 SMATADIVDAEVRELVEKAYKRATEIITTHIDILHKLAQLLIEKETVDGEEF---MSLFI 707
Query: 659 DVSAD 663
D A+
Sbjct: 708 DGQAE 712
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 1277 (454.6 bits), Expect = 3.5e-130, P = 3.5e-130
Identities = 282/593 (47%), Positives = 372/593 (62%)
Query: 80 TSNRMTYSRFLQYLDEGSVKKVDLFENGNVAIAEIFNQALDKIQRVKVQLPGLPQELLRK 139
T R+ YS F+ +D G V V + GN EI + D + + P L K
Sbjct: 31 TQERLGYSDFIAAVDAGKVSTVTV--QGN----EIIGKYSDG-KEFRSYKP-TDAMLSEK 82
Query: 140 MKEKNVDFAARPMEMNWGVSLLDFLANFGFPXXXXXXXXXXXXXVNSPGGPNLPFGLGRS 199
+ EK ++ +A+P E VS ++ FP GG G+S
Sbjct: 83 LLEKKINVSAKPEEEK--VSWFSIFISW-FPLLFLVGVWIFFMR-QMQGGGGKAMAFGKS 138
Query: 200 KAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTG 259
+AK E VTF+DVAGVDEAK++ +EI+QFL+ P+KF +G +IPKGVLLVGPPGTG
Sbjct: 139 RAKLLTEAQGRVTFEDVAGVDEAKEELEEIIQFLKDPKKFTKLGGRIPKGVLLVGPPGTG 198
Query: 260 KTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVX 319
KTLLA+A+AGEAGVPFFS+SGS+F+EMFVGVGASRVRDLF + K N+PC++FIDEIDAV
Sbjct: 199 KTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFVQGKKNAPCIIFIDEIDAVG 258
Query: 320 XXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQV 379
+DEREQTLNQLL EMDGF N GVI+IAATNRP++LD AL RPGRFDRQV
Sbjct: 259 RHRGAGLGGGHDEREQTLNQLLVEMDGFESNEGVILIAATNRPDVLDPALLRPGRFDRQV 318
Query: 380 SVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGK 439
V PD++GRE ILKVH+ L DV L VIA TPGFSGADL+N++NEAA+LA R+ K
Sbjct: 319 VVPQPDVKGREMILKVHTKKTPLASDVDLGVIARGTPGFSGADLSNVVNEAALLAARKDK 378
Query: 440 ANITLKEIDDSIDRIVAGMEGTKMT-DGKNKILVAYHEIGHAVCATLTPGHDPVQKVTLI 498
+ + +K+ DD+ D+++ G+E M + K AYHE GH + A L PG DPV KV++I
Sbjct: 379 SFVEMKDFDDAKDKVLMGVERRSMVISEEEKKNTAYHEAGHTLVAKLIPGTDPVHKVSII 438
Query: 499 PRGQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQIT 558
PRG+A G+T LP ED +K+ L RI +GGRAAEE+IF E +TTGA D+++ T
Sbjct: 439 PRGRALGVTMQLPIEDKHSYNKESLLNRIAVLMGGRAAEEIIFNE--LTTGAGNDIERAT 496
Query: 559 QIARQMVTRYGMSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIESA 617
+IAR+MV +GMSE +GP T +S + M + SE A +ID+ +R II+ +
Sbjct: 497 EIARKMVCEWGMSEKMGPVTF-GKKEESIFLGRDMSMHKNYSEATAVEIDEEIRKIIDGS 555
Query: 618 YEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVLSEFTDVSADQVDRTPI 670
Y K + N + L L+EKE L+GDE ++ + S V+ P+
Sbjct: 556 YSRVKQLLNENLSVLHCLATQLIEKENLTGDEVDRIIKDDCAASRAAVEEAPV 608
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 1265 (450.4 bits), Expect = 6.6e-129, P = 6.6e-129
Identities = 284/584 (48%), Positives = 372/584 (63%)
Query: 80 TSNR-MTYSRFLQYLDEGSVKKVDLFENGNVAIAEIFNQALDKIQRVKVQLPGLPQELLR 138
TS R + Y F L++G V V + + I EI D R K + P EL +
Sbjct: 30 TSIRDLKYDEFYSLLEKGQVASVAI--QTDRTINEISGVLRDGT-RFKTRGPLEDAELYK 86
Query: 139 KMKEKNVDFAARP-MEMNWGVSLLDFLANFGFPXXXXXXXXXXXXXVNSPGGPNLPFGLG 197
+K+ NV P E + +LL L P + GG N G
Sbjct: 87 DLKKMNVTVEIMPPKEPAFWANLLSSL----LPVLLMVGLFFFFMQ-QAQGGGNRVMSFG 141
Query: 198 RSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPG 257
+S+AK + VTF DVAG+DE K++ EIV+FL+ P K+ +GA+IPKGVLL G PG
Sbjct: 142 KSRAKLHTDEKKRVTFADVAGIDEVKEELAEIVEFLKNPRKYNELGARIPKGVLLFGQPG 201
Query: 258 TGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDA 317
TGKTLLA+AIAGEAGVPFFS+SGS+F+EMFVGVGASRVRDLF +AK N+PC+VFIDEIDA
Sbjct: 202 TGKTLLARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDA 261
Query: 318 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDR 377
V +DEREQTLNQLL EMDGF N G+I+IAATNRP+ILD AL RPGRFDR
Sbjct: 262 VGRQRGAGLGGGHDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFDR 321
Query: 378 QVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRR 437
+ V PDI GR++ILKVH K L DV L V+A RTPGF+GADLAN++NEAA+LA RR
Sbjct: 322 HIVVDTPDINGRKEILKVHVKGKPLGDDVDLDVLARRTPGFTGADLANMVNEAALLAARR 381
Query: 438 GKANITLKEIDDSIDRIVAGMEG-TKMTDGKNKILVAYHEIGHAVCATLTPGHDPVQKVT 496
K I ++E++++I+R++AG E +K+ + K LVAYHE GHA+ L P DPV K++
Sbjct: 382 NKKVINMEEMEEAIERVIAGPEKKSKVISEREKRLVAYHEAGHAMVGYLLPHTDPVHKIS 441
Query: 497 LIPRGQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQ 556
+IPRG+A G T LPEED + ++K QL I LGGR AE ++ +I+TGA DL++
Sbjct: 442 IIPRGRAGGYTLLLPEEDRSYMTKSQLLDEITMLLGGRVAEALVL--EDISTGARNDLER 499
Query: 557 ITQIARQMVTRYGMSE-IGPWTLIDPSVQSSDVVM--RMLARN-SMSEKLADDIDKTVRN 612
T+ AR+MV YGMSE +GP T + ++ V R LAR+ + SE++A IDK VR
Sbjct: 500 ATETARRMVMEYGMSEELGPLTF----GKGTEAVFLGRDLARDRNYSEEIAYTIDKEVRK 555
Query: 613 IIESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVLSE 656
II+S Y A+ ++ N + + LME ET+ G+EF ++ E
Sbjct: 556 IIDSCYSRAEEILKKNINVLHLVATKLMEVETMEGEEFEKLMKE 599
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 1265 (450.4 bits), Expect = 6.6e-129, P = 6.6e-129
Identities = 284/584 (48%), Positives = 372/584 (63%)
Query: 80 TSNR-MTYSRFLQYLDEGSVKKVDLFENGNVAIAEIFNQALDKIQRVKVQLPGLPQELLR 138
TS R + Y F L++G V V + + I EI D R K + P EL +
Sbjct: 30 TSIRDLKYDEFYSLLEKGQVASVAI--QTDRTINEISGVLRDGT-RFKTRGPLEDAELYK 86
Query: 139 KMKEKNVDFAARP-MEMNWGVSLLDFLANFGFPXXXXXXXXXXXXXVNSPGGPNLPFGLG 197
+K+ NV P E + +LL L P + GG N G
Sbjct: 87 DLKKMNVTVEIMPPKEPAFWANLLSSL----LPVLLMVGLFFFFMQ-QAQGGGNRVMSFG 141
Query: 198 RSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPG 257
+S+AK + VTF DVAG+DE K++ EIV+FL+ P K+ +GA+IPKGVLL G PG
Sbjct: 142 KSRAKLHTDEKKRVTFADVAGIDEVKEELAEIVEFLKNPRKYNELGARIPKGVLLFGQPG 201
Query: 258 TGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDA 317
TGKTLLA+AIAGEAGVPFFS+SGS+F+EMFVGVGASRVRDLF +AK N+PC+VFIDEIDA
Sbjct: 202 TGKTLLARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDA 261
Query: 318 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDR 377
V +DEREQTLNQLL EMDGF N G+I+IAATNRP+ILD AL RPGRFDR
Sbjct: 262 VGRQRGAGLGGGHDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFDR 321
Query: 378 QVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRR 437
+ V PDI GR++ILKVH K L DV L V+A RTPGF+GADLAN++NEAA+LA RR
Sbjct: 322 HIVVDTPDINGRKEILKVHVKGKPLGDDVDLDVLARRTPGFTGADLANMVNEAALLAARR 381
Query: 438 GKANITLKEIDDSIDRIVAGMEG-TKMTDGKNKILVAYHEIGHAVCATLTPGHDPVQKVT 496
K I ++E++++I+R++AG E +K+ + K LVAYHE GHA+ L P DPV K++
Sbjct: 382 NKKVINMEEMEEAIERVIAGPEKKSKVISEREKRLVAYHEAGHAMVGYLLPHTDPVHKIS 441
Query: 497 LIPRGQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQ 556
+IPRG+A G T LPEED + ++K QL I LGGR AE ++ +I+TGA DL++
Sbjct: 442 IIPRGRAGGYTLLLPEEDRSYMTKSQLLDEITMLLGGRVAEALVL--EDISTGARNDLER 499
Query: 557 ITQIARQMVTRYGMSE-IGPWTLIDPSVQSSDVVM--RMLARN-SMSEKLADDIDKTVRN 612
T+ AR+MV YGMSE +GP T + ++ V R LAR+ + SE++A IDK VR
Sbjct: 500 ATETARRMVMEYGMSEELGPLTF----GKGTEAVFLGRDLARDRNYSEEIAYTIDKEVRK 555
Query: 613 IIESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVLSE 656
II+S Y A+ ++ N + + LME ET+ G+EF ++ E
Sbjct: 556 IIDSCYSRAEEILKKNINVLHLVATKLMEVETMEGEEFEKLMKE 599
>TIGR_CMR|BA_0064 [details] [associations]
symbol:BA_0064 "cell division protein FtsH" species:198094
"Bacillus anthracis str. Ames" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0051301 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0030163 HOGENOM:HOG000217277 TIGRFAMs:TIGR01241 KO:K03798
ProtClustDB:CLSK886567 HSSP:Q9LCZ4 OMA:QINMEEV RefSeq:NP_842633.1
RefSeq:YP_016667.1 RefSeq:YP_026351.1 ProteinModelPortal:Q81VX5
SMR:Q81VX5 IntAct:Q81VX5 DNASU:1086600
EnsemblBacteria:EBBACT00000009752 EnsemblBacteria:EBBACT00000016661
EnsemblBacteria:EBBACT00000022411 GeneID:1086600 GeneID:2819677
GeneID:2851579 KEGG:ban:BA_0064 KEGG:bar:GBAA_0064 KEGG:bat:BAS0064
BioCyc:BANT260799:GJAJ-73-MONOMER BioCyc:BANT261594:GJ7F-75-MONOMER
Uniprot:Q81VX5
Length = 633
Score = 1255 (446.8 bits), Expect = 7.6e-128, P = 7.6e-128
Identities = 268/573 (46%), Positives = 369/573 (64%)
Query: 84 MTYSRFLQYLDEGSVKKVDLF-ENGNVAIAEIFNQALDKIQRVKVQLPGLPQELLRKMKE 142
++Y +F+ L++G V+ V L +NG + FN + Q V P +EL +K+ +
Sbjct: 35 VSYDKFITKLEKGEVRNVQLQPKNGVFEVKGQFNNSSQGEQFV-TYAPNT-EELQKKIND 92
Query: 143 K--NVDFAARPMEMNWGVSLLDFLANFGFPXXXXXXXXXXXXXVNSPGGPNLPFGLGRSK 200
K + +P E + + F + P + GG + G+SK
Sbjct: 93 KAQGAEVKYQPAEET--SAWVTFFTSI-IPFVIIFILFFFLLN-QAQGGGSRVMNFGKSK 148
Query: 201 AKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGK 260
AK + V F DVAG DE KQ+ E+V+FL+ P KFA VGA+IPKGVLLVGPPGTGK
Sbjct: 149 AKLYNDEKKKVRFRDVAGADEEKQELVEVVEFLKDPRKFAEVGARIPKGVLLVGPPGTGK 208
Query: 261 TLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXX 320
TLLA+A+AGEAGVPFFS+SGS+F+EMFVGVGASRVRDLF AK N+PC++FIDEIDAV
Sbjct: 209 TLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGR 268
Query: 321 XXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVS 380
+DEREQTLNQLL EMDGF N G+I+IAATNRP+ILD AL RPGRFDRQ++
Sbjct: 269 QRGAGLGGGHDEREQTLNQLLVEMDGFGANEGIIIIAATNRPDILDPALLRPGRFDRQIT 328
Query: 381 VGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKA 440
V PD+ GRE +LKVH+ NK LD++++L IATRTPGFSGADL NL+NEAA++A R+ K
Sbjct: 329 VDRPDVNGREAVLKVHARNKPLDENINLRAIATRTPGFSGADLENLLNEAALVAARQDKK 388
Query: 441 NITLKEIDDSIDRIVAG-MEGTKMTDGKNKILVAYHEIGHAVCATLTPGHDPVQKVTLIP 499
I + +ID++ DR++AG + +++ K + +VA+HE GH V + D V KVT++P
Sbjct: 389 KIDMSDIDEATDRVIAGPAKKSRVISEKERNIVAFHEAGHTVIGVVLDEADVVHKVTIVP 448
Query: 500 RGQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQITQ 559
RGQA G LP+ED ++K +L +I G LGGR AEE++FGE ++TGA D Q+ T
Sbjct: 449 RGQAGGYAVMLPKEDRYFMTKPELLDKITGLLGGRVAEEIVFGE--VSTGAHNDFQRATG 506
Query: 560 IARQMVTRYGMSE-IGPWTLIDPSVQSSDVVMR--MLARNSMSEKLADDIDKTVRNIIES 616
IAR+MVT +GMS+ +GP S Q V + + + S+ +A +ID ++ I++
Sbjct: 507 IARRMVTEFGMSDKLGPMQF--GSSQGGQVFLGRDFHSEQNYSDAIAHEIDMEMQTIMKE 564
Query: 617 AYEVAKNHIRNNREAIDKLVDVLMEKETLSGDE 649
Y AK + +NR+ +D + L+E ETL ++
Sbjct: 565 CYARAKQILTDNRDKLDLIAKTLLEVETLDAEQ 597
>UNIPROTKB|P37476 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0008233 "peptidase activity" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IDA] [GO:0030428 "cell septum"
evidence=IDA] [GO:0043934 "sporulation" evidence=IMP]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0006950 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0007049
GO:GO:0030163 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0043934
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0008233
GO:GO:0030428 EMBL:D26185 HOGENOM:HOG000217276 KO:K03798 PIR:E69627
RefSeq:NP_387950.1 ProteinModelPortal:P37476 SMR:P37476
IntAct:P37476 MEROPS:M41.009 EnsemblBacteria:EBBACT00000001428
GeneID:938094 KEGG:bsu:BSU00690 PATRIC:18971613 GenoList:BSU00690
OMA:ENMSYST ProtClustDB:CLSK886567 BioCyc:BSUB:BSU00690-MONOMER
Uniprot:P37476
Length = 637
Score = 1248 (444.4 bits), Expect = 4.2e-127, P = 4.2e-127
Identities = 276/585 (47%), Positives = 366/585 (62%)
Query: 80 TSNRMTYSRFLQYLDEGSVKKVDLFENGNVAIAEIFNQALDKIQRVKVQLP-GL-PQELL 137
T N M+YS F++ LD+G V V + V + + DK Q +P G ++
Sbjct: 32 TEN-MSYSTFIKNLDDGKVDSVSVQPVRGVYEVKGQLKNYDKDQYFLTHVPEGKGADQIF 90
Query: 138 RKMKEKNVDFAARPMEMNWGVSLLDFLANFGFPXXXXXXXXXXXXXVNSPGGPNLPFGLG 197
+K+ +V W + FL P + GG + G
Sbjct: 91 NALKKTDVKVEPAQETSGW----VTFLTTI-IPFVIIFILFFFLLN-QAQGGGSRVMNFG 144
Query: 198 RSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPG 257
+SKAK E V F DVAG DE KQ+ E+V+FL+ P KFA +GA+IPKGVLLVGPPG
Sbjct: 145 KSKAKLYTEEKKRVKFKDVAGADEEKQELVEVVEFLKDPRKFAELGARIPKGVLLVGPPG 204
Query: 258 TGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDA 317
TGKTLLAKA AGEAGVPFFS+SGS+F+EMFVGVGASRVRDLF AK N+PCL+FIDEIDA
Sbjct: 205 TGKTLLAKACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCLIFIDEIDA 264
Query: 318 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDR 377
V +DEREQTLNQLL EMDGF+ N G+I+IAATNR +ILD AL RPGRFDR
Sbjct: 265 VGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDR 324
Query: 378 QVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRR 437
Q++V PD+ GRE +LKVH+ NK LD+ V+L IA RTPGFSGADL NL+NEAA++A R+
Sbjct: 325 QITVDRPDVIGREAVLKVHARNKPLDETVNLKSIAMRTPGFSGADLENLLNEAALVAARQ 384
Query: 438 GKANITLKEIDDSIDRIVAG-MEGTKMTDGKNKILVAYHEIGHAVCATLTPGHDPVQKVT 496
K I ++ID++ DR++AG + +++ K + +VAYHE GH V + D V KVT
Sbjct: 385 NKKKIDARDIDEATDRVIAGPAKKSRVISKKERNIVAYHEGGHTVIGLVLDEADMVHKVT 444
Query: 497 LIPRGQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQ 556
++PRGQA G LP ED +K +L +IVG LGGR AEE+IFGE ++TGA D Q+
Sbjct: 445 IVPRGQAGGYAVMLPREDRYFQTKPELLDKIVGLLGGRVAEEIIFGE--VSTGAHNDFQR 502
Query: 557 ITQIARQMVTRYGMSE-IGPWTLIDPSVQSSDVVMRMLARNSM--SEKLADDIDKTVRNI 613
T IAR+MVT +GMSE +GP L Q V + N S+++A +ID+ ++ I
Sbjct: 503 ATNIARRMVTEFGMSEKLGP--LQFGQSQGGQVFLGRDFNNEQNYSDQIAYEIDQEIQRI 560
Query: 614 IESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVLSEFT 658
I+ YE AK + NR+ ++ + L++ ETL ++ + ++ T
Sbjct: 561 IKECYERAKQILTENRDKLELIAQTLLKVETLDAEQIKHLIDHGT 605
>UNIPROTKB|Q9KU86 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241 HSSP:P28691
KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299 RefSeq:NP_230286.1
ProteinModelPortal:Q9KU86 SMR:Q9KU86 DNASU:2615425 GeneID:2615425
KEGG:vch:VC0637 PATRIC:20080383 ProtClustDB:CLSK874054
Uniprot:Q9KU86
Length = 651
Score = 1234 (439.4 bits), Expect = 1.3e-125, P = 1.3e-125
Identities = 270/578 (46%), Positives = 360/578 (62%)
Query: 76 PIEYTSNRMTYSRFLQYLDEGSVKKVDLFENGNVAIAEIFNQALDKIQRVKVQLPGLPQE 135
P E + Y+ F++ + +G +++ F NG + + R +P Q+
Sbjct: 27 PGENNGRAVDYTTFVKEVGQGQIQEAQ-FNNGEITFMRRGGGS-----RYVTYMPVYDQK 80
Query: 136 LLRKMKEKNVDFAARPMEMNWGVSLLDFLANFGFPXXXXXXXXXXXXXVNSPGGPNLPFG 195
LL + ++V P E SLL + FP GG
Sbjct: 81 LLDDLINQDVKVQGTPPEEQ---SLLGTIFISWFPMILLIGVWIFFMRQMQGGGGKGAMS 137
Query: 196 LGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGP 255
G+SKA+ E TF DVAG DEAK+D +E+V +L+ P +F +G KIP GVL+VGP
Sbjct: 138 FGKSKARMMSEDQIKTTFSDVAGCDEAKEDVKELVDYLRDPSRFQKLGGKIPTGVLMVGP 197
Query: 256 PGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEI 315
PGTGKTLLAKAIAGEA VPFF++SGS+F+EMFVGVGASRVRD+F +AK SPC++FIDEI
Sbjct: 198 PGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEI 257
Query: 316 DAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRF 375
DAV +DEREQTLNQ+L EMDGF GN G+IVIAATNRP++LD AL RPGRF
Sbjct: 258 DAVGRQRGAGVGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRF 317
Query: 376 DRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAG 435
DRQV VGLPD+RGREQILKVH L DV S+IA TPGFSGADLANL+NEAA+ A
Sbjct: 318 DRQVVVGLPDVRGREQILKVHMRKVPLANDVEPSLIARGTPGFSGADLANLVNEAALFAA 377
Query: 436 RRGKANITLKEIDDSIDRIVAGMEGTKMTDGKN-KILVAYHEIGHAVCATLTPGHDPVQK 494
R K N+++ E + + D+I+ G E M + K AYHE GHAV L P HDPV K
Sbjct: 378 RGNKRNVSMVEFELAKDKIMMGAERRSMVMSEEIKESTAYHEAGHAVVGRLVPEHDPVYK 437
Query: 495 VTLIPRGQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDL 554
V++IPRG+A G+T +LPE+D +SKQ L + I GGR AEE+I+G+ +++TGA+ D+
Sbjct: 438 VSIIPRGRALGVTMYLPEQDRVSMSKQHLESMISSLYGGRLAEELIYGKEKVSTGASNDI 497
Query: 555 QQITQIARQMVTRYGMSE-IGPWTLIDPSVQSSDVVM-RMLARNS-MSEKLADDIDKTVR 611
++ T+IAR+MVT++G SE +GP + +V + R + + MS+ A ID VR
Sbjct: 498 ERATEIARKMVTQWGFSEKLGPMLYAE---DEGEVFLGRSVTQTKHMSDDTAKLIDDEVR 554
Query: 612 NIIESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDE 649
II+ YE A+ I +N + + + D LM+ ET+ +
Sbjct: 555 QIIDRNYERARQIIMDNMDIMHAMKDALMKYETIDAGQ 592
>TIGR_CMR|VC_0637 [details] [associations]
symbol:VC_0637 "cell division protein FtsH" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000910 "cytokinesis"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299
RefSeq:NP_230286.1 ProteinModelPortal:Q9KU86 SMR:Q9KU86
DNASU:2615425 GeneID:2615425 KEGG:vch:VC0637 PATRIC:20080383
ProtClustDB:CLSK874054 Uniprot:Q9KU86
Length = 651
Score = 1234 (439.4 bits), Expect = 1.3e-125, P = 1.3e-125
Identities = 270/578 (46%), Positives = 360/578 (62%)
Query: 76 PIEYTSNRMTYSRFLQYLDEGSVKKVDLFENGNVAIAEIFNQALDKIQRVKVQLPGLPQE 135
P E + Y+ F++ + +G +++ F NG + + R +P Q+
Sbjct: 27 PGENNGRAVDYTTFVKEVGQGQIQEAQ-FNNGEITFMRRGGGS-----RYVTYMPVYDQK 80
Query: 136 LLRKMKEKNVDFAARPMEMNWGVSLLDFLANFGFPXXXXXXXXXXXXXVNSPGGPNLPFG 195
LL + ++V P E SLL + FP GG
Sbjct: 81 LLDDLINQDVKVQGTPPEEQ---SLLGTIFISWFPMILLIGVWIFFMRQMQGGGGKGAMS 137
Query: 196 LGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGP 255
G+SKA+ E TF DVAG DEAK+D +E+V +L+ P +F +G KIP GVL+VGP
Sbjct: 138 FGKSKARMMSEDQIKTTFSDVAGCDEAKEDVKELVDYLRDPSRFQKLGGKIPTGVLMVGP 197
Query: 256 PGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEI 315
PGTGKTLLAKAIAGEA VPFF++SGS+F+EMFVGVGASRVRD+F +AK SPC++FIDEI
Sbjct: 198 PGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEI 257
Query: 316 DAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRF 375
DAV +DEREQTLNQ+L EMDGF GN G+IVIAATNRP++LD AL RPGRF
Sbjct: 258 DAVGRQRGAGVGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRF 317
Query: 376 DRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAG 435
DRQV VGLPD+RGREQILKVH L DV S+IA TPGFSGADLANL+NEAA+ A
Sbjct: 318 DRQVVVGLPDVRGREQILKVHMRKVPLANDVEPSLIARGTPGFSGADLANLVNEAALFAA 377
Query: 436 RRGKANITLKEIDDSIDRIVAGMEGTKMTDGKN-KILVAYHEIGHAVCATLTPGHDPVQK 494
R K N+++ E + + D+I+ G E M + K AYHE GHAV L P HDPV K
Sbjct: 378 RGNKRNVSMVEFELAKDKIMMGAERRSMVMSEEIKESTAYHEAGHAVVGRLVPEHDPVYK 437
Query: 495 VTLIPRGQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDL 554
V++IPRG+A G+T +LPE+D +SKQ L + I GGR AEE+I+G+ +++TGA+ D+
Sbjct: 438 VSIIPRGRALGVTMYLPEQDRVSMSKQHLESMISSLYGGRLAEELIYGKEKVSTGASNDI 497
Query: 555 QQITQIARQMVTRYGMSE-IGPWTLIDPSVQSSDVVM-RMLARNS-MSEKLADDIDKTVR 611
++ T+IAR+MVT++G SE +GP + +V + R + + MS+ A ID VR
Sbjct: 498 ERATEIARKMVTQWGFSEKLGPMLYAE---DEGEVFLGRSVTQTKHMSDDTAKLIDDEVR 554
Query: 612 NIIESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDE 649
II+ YE A+ I +N + + + D LM+ ET+ +
Sbjct: 555 QIIDRNYERARQIIMDNMDIMHAMKDALMKYETIDAGQ 592
>UNIPROTKB|P0AAI3 [details] [associations]
symbol:ftsH species:83333 "Escherichia coli K-12"
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006508
"proteolysis" evidence=IEA;IDA] [GO:0043273 "CTPase activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA;IDA]
[GO:0030145 "manganese ion binding" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA;IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0008270 GO:GO:0006508 EMBL:U18997
GO:GO:0004222 GO:GO:0016887 GO:GO:0030145 GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0043273 EMBL:U01376
HOGENOM:HOG000217276 KO:K03798 EMBL:M83138 PIR:S35109
RefSeq:NP_417645.1 RefSeq:YP_491363.1 PDB:1LV7 PDBsum:1LV7
ProteinModelPortal:P0AAI3 SMR:P0AAI3 DIP:DIP-35828N IntAct:P0AAI3
MINT:MINT-1226643 MEROPS:M41.001 PaxDb:P0AAI3 PRIDE:P0AAI3
EnsemblBacteria:EBESCT00000000369 EnsemblBacteria:EBESCT00000000370
EnsemblBacteria:EBESCT00000017485 GeneID:12933986 GeneID:947690
KEGG:ecj:Y75_p3098 KEGG:eco:b3178 PATRIC:32121774 EchoBASE:EB1469
EcoGene:EG11506 OMA:RSIIDQC ProtClustDB:PRK10733
BioCyc:EcoCyc:EG11506-MONOMER BioCyc:ECOL316407:JW3145-MONOMER
BioCyc:MetaCyc:EG11506-MONOMER SABIO-RK:P0AAI3
EvolutionaryTrace:P0AAI3 Genevestigator:P0AAI3 Uniprot:P0AAI3
Length = 644
Score = 1223 (435.6 bits), Expect = 1.9e-124, P = 1.9e-124
Identities = 270/578 (46%), Positives = 360/578 (62%)
Query: 76 PIEYTSNRMTYSRFLQYLDEGSVKKVDLFENGNVAIAEIFNQALDKIQRVKVQLPGLPQE 135
P E ++ YS FLQ ++ V++ + NG EI N R +P +
Sbjct: 24 PSESNGRKVDYSTFLQEVNNDQVREARI--NGR----EI-NVTKKDSNRYTTYIPVQDPK 76
Query: 136 LLRKMKEKNVDFAARPMEMNWGVSLLDFLANFGFPXXXXXXXXXXXXXVNSPGGPNLPFG 195
LL + KNV P E SLL + FP GG
Sbjct: 77 LLDNLLTKNVKVVGEPPEEP---SLLASIFISWFPMLLLIGVWIFFMRQMQGGGGKGAMS 133
Query: 196 LGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGP 255
G+SKA+ E TF DVAG DEAK++ E+V++L+ P +F +G KIPKGVL+VGP
Sbjct: 134 FGKSKARMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGP 193
Query: 256 PGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEI 315
PGTGKTLLAKAIAGEA VPFF++SGS+F+EMFVGVGASRVRD+F +AK +PC++FIDEI
Sbjct: 194 PGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEI 253
Query: 316 DAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRF 375
DAV +DEREQTLNQ+L EMDGF GN G+IVIAATNRP++LD AL RPGRF
Sbjct: 254 DAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRF 313
Query: 376 DRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAG 435
DRQV VGLPD+RGREQILKVH L D+ ++IA TPGFSGADLANL+NEAA+ A
Sbjct: 314 DRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAA 373
Query: 436 RRGKANITLKEIDDSIDRIVAGMEGTKM--TDGKNKILVAYHEIGHAVCATLTPGHDPVQ 493
R K +++ E + + D+I+ G E M T+ + K AYHE GHA+ L P HDPV
Sbjct: 374 RGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQ-KESTAYHEAGHAIIGRLVPEHDPVH 432
Query: 494 KVTLIPRGQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGD 553
KVT+IPRG+A G+T+FLPE D S+Q+L ++I GGR AEE+I+G ++TGA+ D
Sbjct: 433 KVTIIPRGRALGVTFFLPEGDAISASRQKLESQISTLYGGRLAEEIIYGPEHVSTGASND 492
Query: 554 LQQITQIARQMVTRYGMSE-IGPWTLIDPSVQSSDVVMRMLAR-NSMSEKLADDIDKTVR 611
++ T +AR MVT++G SE +GP L+ + + R +A+ MS++ A ID+ V+
Sbjct: 493 IKVATNLARNMVTQWGFSEKLGP--LLYAEEEGEVFLGRSVAKAKHMSDETARIIDQEVK 550
Query: 612 NIIESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDE 649
+IE Y A+ + +N + + + D LM+ ET+ +
Sbjct: 551 ALIERNYNRARQLLTDNMDILHAMKDALMKYETIDAPQ 588
>TIGR_CMR|CBU_1352 [details] [associations]
symbol:CBU_1352 "ATP-dependent metalloprotease FtsH"
species:227377 "Coxiella burnetii RSA 493" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HSSP:P28691 HOGENOM:HOG000217276 KO:K03798
MEROPS:M41.001 OMA:RSIIDQC RefSeq:NP_820341.1
ProteinModelPortal:Q83BY5 SMR:Q83BY5 PRIDE:Q83BY5 GeneID:1209258
KEGG:cbu:CBU_1352 PATRIC:17931447 ProtClustDB:CLSK914722
BioCyc:CBUR227377:GJ7S-1342-MONOMER Uniprot:Q83BY5
Length = 647
Score = 1223 (435.6 bits), Expect = 1.9e-124, P = 1.9e-124
Identities = 268/577 (46%), Positives = 365/577 (63%)
Query: 85 TYSRFLQYLDEGSVKKVDLFENGNVAIAEIFNQALDKIQRVKVQLPGLPQELLRKMKEKN 144
+YS+F+Q ++ V V + G+ EI D + LP Q LL ++ K
Sbjct: 36 SYSQFVQAVNNDKVSSVVI--QGH----EIKGVTKDN-KHFTTYLPMEDQALLNQLMAKG 88
Query: 145 VDFAARPMEMNWGVSLLDFLANFGFPXXXXXXXXXXXXXVNSPGGPNL-PFGLGRSKAKF 203
V P + L L ++ P GG P GRSKA+
Sbjct: 89 VSVKGEPPKQQ--SMFLHILISW-LPFLILIFVWILFMRQMQGGGRGGGPMSFGRSKARL 145
Query: 204 EMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTLL 263
+ VTFDDVAGVDEAK++ +E+V+FL+ P KF +G K+P GVLLVGPPGTGKTLL
Sbjct: 146 LSQDQVKVTFDDVAGVDEAKEEVKELVEFLRDPGKFQRLGGKMPCGVLLVGPPGTGKTLL 205
Query: 264 AKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXX 323
AKA+AGEA VPFF++SGS+F+EMFVGVGASRVRD+F++AK +PC++FIDEIDAV
Sbjct: 206 AKAVAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFDQAKKQAPCIIFIDEIDAVGRHRG 265
Query: 324 XXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGL 383
+DEREQTLNQLL EMDGF G G+IV+AATNRP++LD AL RPGRFDRQV V L
Sbjct: 266 AGLGGGHDEREQTLNQLLVEMDGFEGKEGIIVMAATNRPDVLDPALLRPGRFDRQVVVPL 325
Query: 384 PDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANIT 443
PDI+GRE ILKVH N L KDV SVIA TPGFSGADLAN++NEAA+ A R K +++
Sbjct: 326 PDIKGREYILKVHMNKLPLAKDVKASVIARGTPGFSGADLANIVNEAALFAARENKKDVS 385
Query: 444 LKEIDDSIDRIVAGMEGTKM--TDGKNKILVAYHEIGHAVCATLTPGHDPVQKVTLIPRG 501
+ E + + D+I+ G E M +D + K L AYHE GHA+ HDPV KVT+IPRG
Sbjct: 386 MSEFERAKDKIMMGAERRSMVMSDDEKK-LTAYHEAGHAIVGLHMLEHDPVYKVTIIPRG 444
Query: 502 QARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQITQIA 561
+A G+T FLPE D ++K++L ++ G GGR AEE+IFG +TTGA+ D+++ T+IA
Sbjct: 445 RALGVTMFLPEHDRYSMTKRRLECQLAGLFGGRIAEEIIFGPDLVTTGASNDIEKATEIA 504
Query: 562 RQMVTRYGMSE-IGPWTLIDPSVQSSDVVM--RMLARNSMSEKLADDIDKTVRNIIESAY 618
R MVT++G+S+ +GP T + + +V + + R +S+ +ID VR I+++AY
Sbjct: 505 RNMVTKWGLSQKLGPLTYRE---EEGEVFLGRSVTQRKDISDATNKEIDSEVRRIVDTAY 561
Query: 619 EVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVLS 655
AK + + E + + L++ ET+ + + +L+
Sbjct: 562 TTAKQTLEEHIEQLHLMAKALIKYETIGEAQIKEILA 598
>TIGR_CMR|CPS_3452 [details] [associations]
symbol:CPS_3452 "ATP-dependent metalloprotease FtsH"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 OMA:RSIIDQC
RefSeq:YP_270126.1 ProteinModelPortal:Q47YJ4 SMR:Q47YJ4
STRING:Q47YJ4 GeneID:3519317 KEGG:cps:CPS_3452 PATRIC:21469851
BioCyc:CPSY167879:GI48-3480-MONOMER Uniprot:Q47YJ4
Length = 660
Score = 1223 (435.6 bits), Expect = 1.9e-124, P = 1.9e-124
Identities = 265/577 (45%), Positives = 370/577 (64%)
Query: 75 SPIEYTSNRMTYSRFLQYLDEGSVKKVDLFENGNVAIAEIFNQALDKIQRVKVQLPG-LP 133
SP +M Y+RF+Q + +G ++ + NG + + +A K +PG
Sbjct: 23 SPNTTEDQQMDYTRFIQDVRQGQIRDASVDRNGVITGEKRSGEAY------KTVIPGGYD 76
Query: 134 QELLRKMKEKNVDFAAR-PMEMNWGVSLLDFLANFGFPXXXXXXXXXXXXXVNSPGGPNL 192
++L+ + ++ V + P E ++ ++ F++ FP GG
Sbjct: 77 RDLINDLVKQGVRAEGKLPEETSFLTTI--FVS--WFPMILLIGVWIFFMRQMQGGGGKG 132
Query: 193 PFGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLL 252
G+SKA+ E TF DVAG DEAK+D E+V +L+ P +F +G +IP G+LL
Sbjct: 133 AMSFGKSKARQLSEEQIKTTFADVAGCDEAKEDVAELVDYLREPSRFQKLGGRIPSGILL 192
Query: 253 VGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFI 312
VG PGTGKTLLAKAIAGEA VPFF++SGS+F+EMFVGVGASRVRD+F +AK +PC++FI
Sbjct: 193 VGQPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFI 252
Query: 313 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRP 372
DEIDAV +DEREQTLNQ+L EMDGF GN GVIVIAATNRP++LD AL RP
Sbjct: 253 DEIDAVGRQRGAGMGGGHDEREQTLNQMLVEMDGFEGNEGVIVIAATNRPDVLDPALLRP 312
Query: 373 GRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAI 432
GRFDRQV+VGLPDIRGREQILKVH L DV VIA TPGFSGADLANL+NEAA+
Sbjct: 313 GRFDRQVTVGLPDIRGREQILKVHMRKVPLGDDVKAEVIARGTPGFSGADLANLVNEAAL 372
Query: 433 LAGRRGKANITLKEIDDSIDRIVAGMEGTKMTDGKN-KILVAYHEIGHAVCATLTPGHDP 491
A R + +++KE D + D+I+ G E M ++ + + AYHE GHA+ L P HDP
Sbjct: 373 CAARTARRVVSMKEFDAAKDKIMMGSERKSMVMSESEREMTAYHEAGHAIIGRLVPDHDP 432
Query: 492 VQKVTLIPRGQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAA 551
V KV++IPRG+A G+T +LPE+D SKQ L + I GGR AEEVI+G +++TGA+
Sbjct: 433 VYKVSIIPRGRALGVTMYLPEQDRFSHSKQHLESNISSLYGGRVAEEVIYGSDKVSTGAS 492
Query: 552 GDLQQITQIARQMVTRYGMSE-IGPWTLIDPSVQSSDVVM-RMLARN-SMSEKLADDIDK 608
D+++ T IAR+MVT++G+SE +GP + + +V + R A++ MS++ A ID+
Sbjct: 493 NDIERATNIARKMVTQWGLSEKMGPMLFAE---EEGEVFLGRTSAKSLHMSDETAKTIDE 549
Query: 609 TVRNIIESAYEVAKNHIRNNREAIDKLVDVLMEKETL 645
++++I Y+ A++ I+ N + + + D LM+ ET+
Sbjct: 550 EIKSVISRNYQRAEDLIKANMDVLHAMKDCLMKYETI 586
>TIGR_CMR|SO_1197 [details] [associations]
symbol:SO_1197 "ATP-dependent metalloprotease FtsH"
species:211586 "Shewanella oneidensis MR-1" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051301 "cell division" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006200
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
OMA:RSIIDQC RefSeq:NP_716822.2 ProteinModelPortal:Q8EHM2 SMR:Q8EHM2
GeneID:1169025 KEGG:son:SO_1197 PATRIC:23522048
ProtClustDB:CLSK906146 Uniprot:Q8EHM2
Length = 652
Score = 1221 (434.9 bits), Expect = 3.0e-124, P = 3.0e-124
Identities = 263/574 (45%), Positives = 365/574 (63%)
Query: 75 SPIEYTSNRMTYSRFLQYLDEGSVKKVDLFENGNVAIAEIFNQALDKIQRVKVQLPGLPQ 134
SP +S +M YS FL + +G V V++ + E + +K + +P Q
Sbjct: 26 SPSSSSSQKMDYSTFLDNVRDGQVATVEV--KSDQRTIEGSKRTGEKFTTI---MPLYDQ 80
Query: 135 ELLRKMKEKNVDFAARPMEMNWGVSLLDFLANFGFPXXXXXXXXXXXXXVNSPGGPNLPF 194
+L+ + K + + E + ++ + F++ FP GG
Sbjct: 81 DLINDLDRKGITMKGQEAEESGFLTQI-FIS--WFPMLLLIGVWIFFMRQMQGGGGKGAM 137
Query: 195 GLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVG 254
G+SKAK E TF DVAG DEAK++ +E+V +L+ P KF +G +IP GVL+VG
Sbjct: 138 SFGKSKAKLMSEDQIKTTFADVAGCDEAKEEVKELVDYLRDPTKFQKLGGRIPTGVLMVG 197
Query: 255 PPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDE 314
PPGTGKTLLAKAIAGE+ VPFF++SGS+F+EMFVGVGASRVRD+F +AK ++PC++FIDE
Sbjct: 198 PPGTGKTLLAKAIAGESKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKSAPCIIFIDE 257
Query: 315 IDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGR 374
IDAV +DEREQTLNQ+L EMDGF GN G+IVIAATNRP++LDSAL RPGR
Sbjct: 258 IDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDSALLRPGR 317
Query: 375 FDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILA 434
FDRQV VGLPD+RGREQILKVH L +DV SVIA TPGFSGADLANL+NEAA+ A
Sbjct: 318 FDRQVVVGLPDVRGREQILKVHMRKVPLSEDVKASVIARGTPGFSGADLANLVNEAALFA 377
Query: 435 GRRGKANITLKEIDDSIDRIVAGMEGTKMTDGK-NKILVAYHEIGHAVCATLTPGHDPVQ 493
R + + ++E + + D+I+ G E M + K + AYHE GHA+ L P HDPV
Sbjct: 378 ARGNRRVVGMEEFERAKDKIMMGAERRSMVMSEAEKEMTAYHEAGHAIVGCLVPEHDPVH 437
Query: 494 KVTLIPRGQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGD 553
KVT+IPRG+A G+T+FLPE D S+++L ++I GGR AEE+I+G +++TGA+ D
Sbjct: 438 KVTIIPRGRALGVTFFLPEADAISQSRRKLESQISVAYGGRLAEELIYGTEKVSTGASQD 497
Query: 554 LQQITQIARQMVTRYGMSE-IGPWTLIDPSVQSSDVVMRMLAR-NSMSEKLADDIDKTVR 611
++ T IAR MVT++G S+ +GP L+ + + R + + +MS++ A ID V+
Sbjct: 498 IKYATSIARNMVTQWGFSDKLGP--LLYAEEEGEVFLGRSMGKAKAMSDETATLIDTEVK 555
Query: 612 NIIESAYEVAKNHIRNNREAIDKLVDVLMEKETL 645
I+ Y AK +++N + + + D LM+ ET+
Sbjct: 556 AFIDKNYSRAKQILQDNVDILHSMKDALMKYETI 589
>TIGR_CMR|NSE_0423 [details] [associations]
symbol:NSE_0423 "ATP-dependent metalloprotease FtsH"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 EMBL:CP000237 GenomeReviews:CP000237_GR
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001 RefSeq:YP_506309.1
ProteinModelPortal:Q2GDY7 SMR:Q2GDY7 STRING:Q2GDY7 GeneID:3931660
KEGG:nse:NSE_0423 PATRIC:22680905 OMA:ENIESLH
ProtClustDB:CLSK749654 BioCyc:NSEN222891:GHFU-445-MONOMER
Uniprot:Q2GDY7
Length = 636
Score = 1194 (425.4 bits), Expect = 2.2e-121, P = 2.2e-121
Identities = 257/577 (44%), Positives = 369/577 (63%)
Query: 81 SNRMTYSRFLQYLDEGSVKKVDLFENGNVA-IAEIFNQALDKIQRVKVQLPGLPQELLRK 139
+ ++ +S FL +++G V+K+ + E +++ + + K + +P LLRK
Sbjct: 35 NEKIQFSEFLDLVEKGEVQKI-VIEGYDISGVLKSGTHFYTKATQYTELIP-----LLRK 88
Query: 140 MKEKNVDFAARPMEMNWGVSLLDFLANFGFPXXXXXXXXXXXXXVNSPGGPNLPFGLGRS 199
NVDF + G+ L + L ++ FP GG N G+S
Sbjct: 89 ---NNVDFQVASGDSFLGL-LFNILISW-FPMLLLIGVWIFFMKQMQAGG-NKTMTFGKS 142
Query: 200 KAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTG 259
KA+ + + VTF DVAG+DEAK++ EIV+FL+ P+KF +G KIPKG LL+GPPGTG
Sbjct: 143 KARLLSDRSNKVTFHDVAGIDEAKEELAEIVEFLREPKKFQKLGGKIPKGCLLIGPPGTG 202
Query: 260 KTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVX 319
KTLLAKAIAGEA VPFFS+SGS+F+EMFVGVGASRVRD+F + K N+PCL+FIDEIDAV
Sbjct: 203 KTLLAKAIAGEAKVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCLIFIDEIDAVG 262
Query: 320 XXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQV 379
NDEREQTLNQLL EMDGF N GVI+IAATNRP++LD AL RPGRFDRQ+
Sbjct: 263 RHRGVGFGGGNDEREQTLNQLLVEMDGFEANEGVIIIAATNRPDVLDPALLRPGRFDRQI 322
Query: 380 SVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGK 439
++ +PDI GR++IL+VH +V +S+IA TPGFSGADLANL+NE+A++A RR K
Sbjct: 323 TISIPDIAGRQKILEVHLKKIPTAPNVEVSIIARGTPGFSGADLANLVNESALIAARRNK 382
Query: 440 ANITLKEIDDSIDRIVAGMEGTKMT-DGKNKILVAYHEIGHAVCATLTPGHDPVQKVTLI 498
+T ++ + + D+I+ GME + + K+L AYHE GHA+ + DP+ K T+I
Sbjct: 383 KVVTNEDFEYARDKILMGMERKSLVMREEEKLLTAYHEAGHAITSLKLEASDPIHKATII 442
Query: 499 PRGQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQIT 558
PRG+A GL LPE D ++ ++ A ++ +GGRAAE+VIFG+ + T+GAA D++Q T
Sbjct: 443 PRGRALGLVMRLPEHDRVSFTRAKMHADLIVAMGGRAAEQVIFGDDKTTSGAASDIKQAT 502
Query: 559 QIARQMVTRYGMSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIESA 617
+AR MVT++GMSE +GP + + ++ + +S ++++ ID V+ ++ A
Sbjct: 503 HLARSMVTKWGMSEKVGPLLYGEQNDPNNHI---------LSIEMSNLIDSEVKQLVTDA 553
Query: 618 YEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVL 654
+ A + N E++ ++ L+E ETL+G E +L
Sbjct: 554 LKEATKILNENIESLHRVAKALLEYETLTGQELSDLL 590
>UNIPROTKB|Q5LNU8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 1190 (424.0 bits), Expect = 5.8e-121, P = 5.8e-121
Identities = 270/591 (45%), Positives = 366/591 (61%)
Query: 81 SNRMTYSRFLQYLDEGSVKKVDLFENGNVAIAEIFNQALDKIQRVKVQLPGLPQELLRKM 140
S TYS F+ +DEG+V KV L +G +I + D V ++ PG E+ +
Sbjct: 35 SQEKTYSEFVSAVDEGNVTKVIL--DGE----QIRYRTSDGRDFVTIK-PG-DAEVTTLL 86
Query: 141 KEKNVDFAARPMEMNWGVSLLDFLANFGFPXXXXXXXXXXXXXVNSPGGPNLPFGLGRSK 200
+KN+ A + + S + L P GG G G+SK
Sbjct: 87 IDKNIPVRAEKQQQSGFQSFIITL----LPFLLLIGVWVYFMNRMQGGGRGGAMGFGKSK 142
Query: 201 AKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGK 260
AK E + VTFDDVAG+DEAK++ +EIV+FL+ P+KF+ +G KIPKG LLVGPPGTGK
Sbjct: 143 AKMLTEKHGRVTFDDVAGIDEAKEELEEIVEFLRNPQKFSRLGGKIPKGALLVGPPGTGK 202
Query: 261 TLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXX 320
TLLA+AIAGEAGVPFF++SGS+F+EMFVGVGASRVRD+F +AK N+PC+VFIDEIDAV
Sbjct: 203 TLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGR 262
Query: 321 XXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVS 380
NDEREQTLNQLL EMDGF N GVI++AATNR ++LD AL RPGRFDR V+
Sbjct: 263 HRGAGYGGGNDEREQTLNQLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFDRNVT 322
Query: 381 VGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKA 440
VG PDI+GRE+IL VH+ L DV L +IA TPGFSGADLANL+NEAA++A R G+
Sbjct: 323 VGNPDIKGREKILGVHARKTPLGPDVDLRIIARGTPGFSGADLANLVNEAALMAARVGRR 382
Query: 441 NITLKEIDDSIDRIVAGMEGTKMT---DGKNKILVAYHEIGHAVCATLTPGHDPVQKVTL 497
+T+++ +++ D+++ G E M D K K AYHE GHAV P DPV K T+
Sbjct: 383 FVTMEDFENAKDKVMMGAERRSMVLTQDQKEK--TAYHEAGHAVVGLALPMCDPVYKATI 440
Query: 498 IPRGQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQI 557
IPRG A G+ LPE D + + ++ + G+AAE + +GE ++ G AGD+QQ
Sbjct: 441 IPRGGALGMVVSLPEMDRLNWHRDECQQKLAMTMAGKAAEILKYGEDHVSNGPAGDIQQA 500
Query: 558 TQIARQMVTRYGMSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIES 616
+Q+AR MV R+GMS+ +G ID + ++ + A S+S + I++ V+ I+
Sbjct: 501 SQLARAMVMRWGMSDKVGN---IDYA-EAHEGYSGNTAGFSVSAHTKELIEEEVKRFIQQ 556
Query: 617 AYEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVLSEFTDVSADQVDR 667
Y+ A + RE D+L L+E ETL+G+E + V+ + D D+
Sbjct: 557 GYDQAHAILTERREDWDRLAQGLLEYETLTGEEIKRVMKGEPPHAGDDEDQ 607
>TIGR_CMR|SPO_3105 [details] [associations]
symbol:SPO_3105 "ATP-dependent metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 1190 (424.0 bits), Expect = 5.8e-121, P = 5.8e-121
Identities = 270/591 (45%), Positives = 366/591 (61%)
Query: 81 SNRMTYSRFLQYLDEGSVKKVDLFENGNVAIAEIFNQALDKIQRVKVQLPGLPQELLRKM 140
S TYS F+ +DEG+V KV L +G +I + D V ++ PG E+ +
Sbjct: 35 SQEKTYSEFVSAVDEGNVTKVIL--DGE----QIRYRTSDGRDFVTIK-PG-DAEVTTLL 86
Query: 141 KEKNVDFAARPMEMNWGVSLLDFLANFGFPXXXXXXXXXXXXXVNSPGGPNLPFGLGRSK 200
+KN+ A + + S + L P GG G G+SK
Sbjct: 87 IDKNIPVRAEKQQQSGFQSFIITL----LPFLLLIGVWVYFMNRMQGGGRGGAMGFGKSK 142
Query: 201 AKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGK 260
AK E + VTFDDVAG+DEAK++ +EIV+FL+ P+KF+ +G KIPKG LLVGPPGTGK
Sbjct: 143 AKMLTEKHGRVTFDDVAGIDEAKEELEEIVEFLRNPQKFSRLGGKIPKGALLVGPPGTGK 202
Query: 261 TLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXX 320
TLLA+AIAGEAGVPFF++SGS+F+EMFVGVGASRVRD+F +AK N+PC+VFIDEIDAV
Sbjct: 203 TLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGR 262
Query: 321 XXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVS 380
NDEREQTLNQLL EMDGF N GVI++AATNR ++LD AL RPGRFDR V+
Sbjct: 263 HRGAGYGGGNDEREQTLNQLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFDRNVT 322
Query: 381 VGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKA 440
VG PDI+GRE+IL VH+ L DV L +IA TPGFSGADLANL+NEAA++A R G+
Sbjct: 323 VGNPDIKGREKILGVHARKTPLGPDVDLRIIARGTPGFSGADLANLVNEAALMAARVGRR 382
Query: 441 NITLKEIDDSIDRIVAGMEGTKMT---DGKNKILVAYHEIGHAVCATLTPGHDPVQKVTL 497
+T+++ +++ D+++ G E M D K K AYHE GHAV P DPV K T+
Sbjct: 383 FVTMEDFENAKDKVMMGAERRSMVLTQDQKEK--TAYHEAGHAVVGLALPMCDPVYKATI 440
Query: 498 IPRGQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQI 557
IPRG A G+ LPE D + + ++ + G+AAE + +GE ++ G AGD+QQ
Sbjct: 441 IPRGGALGMVVSLPEMDRLNWHRDECQQKLAMTMAGKAAEILKYGEDHVSNGPAGDIQQA 500
Query: 558 TQIARQMVTRYGMSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIES 616
+Q+AR MV R+GMS+ +G ID + ++ + A S+S + I++ V+ I+
Sbjct: 501 SQLARAMVMRWGMSDKVGN---IDYA-EAHEGYSGNTAGFSVSAHTKELIEEEVKRFIQQ 556
Query: 617 AYEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVLSEFTDVSADQVDR 667
Y+ A + RE D+L L+E ETL+G+E + V+ + D D+
Sbjct: 557 GYDQAHAILTERREDWDRLAQGLLEYETLTGEEIKRVMKGEPPHAGDDEDQ 607
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 1177 (419.4 bits), Expect = 1.4e-119, P = 1.4e-119
Identities = 253/508 (49%), Positives = 339/508 (66%)
Query: 154 MNWGVSLLDFLANFGFPXXXXXXXXXXXXXVNSPGGPNLPFGLGRSKAK-FEMEPNTGVT 212
++WG +L +L F + G N GRSKAK F M+ T +T
Sbjct: 105 LDWGTMILTYLPFLIF------GGLLIFIFTQARGANNQAVSFGRSKAKLFNMDKPT-IT 157
Query: 213 FDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAG 272
F +VAGVDEAKQ+ E+V+FL++ EKF A+GA+IPKG+LL+GPPGTGKTLLAKAIAGEAG
Sbjct: 158 FANVAGVDEAKQEVGEVVEFLKSREKFQALGARIPKGILLIGPPGTGKTLLAKAIAGEAG 217
Query: 273 VPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXNDE 332
VPFFS+SGSEF+EMFVGVGASRVRDLF++AK N+PC++FIDEIDAV +DE
Sbjct: 218 VPFFSISGSEFVEMFVGVGASRVRDLFDQAKKNAPCIIFIDEIDAVGRQRGAGLGGGHDE 277
Query: 333 REQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGREQI 392
REQTLNQ+L EMDGF ++ VIVIAATNRP+ILD AL RPGRFDR+V + PDI GRE I
Sbjct: 278 REQTLNQILVEMDGFDTDTSVIVIAATNRPDILDPALLRPGRFDRRVVLDKPDITGREAI 337
Query: 393 LKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDSID 452
LK+H+ K L V+L +A +T GFSGADLANL+NEAAILA R+ + + +++++SID
Sbjct: 338 LKIHAKGKPLADTVNLENLAKQTVGFSGADLANLLNEAAILAARKNRKVVETEDLEESID 397
Query: 453 RIVAGMEG-TKMTDGKNKILVAYHEIGHAVCATLTPGHDPVQKVTLIPRGQARGLTWFLP 511
R++AG E ++ + K + AYHE GH + L G DPV K++++ RG G T LP
Sbjct: 398 RVIAGPERKSRRISTQEKEVTAYHETGHGLVLRLVQGADPVHKISIVARGMTLGHTRQLP 457
Query: 512 EEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQITQIARQMVTRYGMS 571
ED L+++ Q A + G L G AEE+ F E++TGA+ DL++ T IA +MVT YGMS
Sbjct: 458 NEDRYLMTRSQFKAMMAGLLAGYVAEELTF--KELSTGASDDLRRATDIAHKMVTSYGMS 515
Query: 572 E-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIESAYEVAKNHIRNNRE 630
+ +GP T + + + + + EK+AD ID+ VR +IE A++ AK + N+
Sbjct: 516 DKLGPRTFGNKE-EMVFLGREISEQKDYGEKVADMIDEEVRGLIEEAHQKAKTILTENKN 574
Query: 631 AIDKLVDVLMEKETLSGDEFRAV-LSEF 657
+ + + L EKETL G E + + EF
Sbjct: 575 RLKFIAEKLFEKETLEGAELENLFVGEF 602
>UNIPROTKB|Q2GFA1 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST
MEROPS:M41.001 ProtClustDB:CLSK749654 RefSeq:YP_507882.1
ProteinModelPortal:Q2GFA1 SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708
KEGG:ech:ECH_1098 PATRIC:20577534
BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 1167 (415.9 bits), Expect = 1.6e-118, P = 1.6e-118
Identities = 255/589 (43%), Positives = 372/589 (63%)
Query: 83 RMTYSRFLQYLDEGSVKKVDLFENGNVAIAEIFNQALDKIQRVKVQLPGLPQELLRKMKE 142
++ +S FL +D V+ +++ E+ N+ ++ + + K Q + + L++ +
Sbjct: 36 KLPFSEFLNKIDNNEVESINIGEH-NIT-GKLKDGS--KFQTTAI----VYDSLIKTLHN 87
Query: 143 KNVDFAARPMEMNWGVSLLDFLANFGFPXXXXXXXXXXXXXVNSPGGPNLPFGLGRSKAK 202
+ V F P + +GV L + L ++ FP GG N +S+AK
Sbjct: 88 QQVTFTFLPEDTFFGV-LSNILVSW-FPMLLLVIIWFIFLKRMQIGG-NRTINFSKSRAK 144
Query: 203 FEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTL 262
E VTF+DVAG+DEAK++ EIV FL+ ++F +G KIPKG LL+G PGTGKTL
Sbjct: 145 LMTENRNKVTFNDVAGIDEAKEELIEIVDFLKHRQRFQKLGGKIPKGCLLIGSPGTGKTL 204
Query: 263 LAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXX 322
LA+AIAGEA VPFFS+SGS+F+EMFVGVGASRVRD+F + K N+PC++FIDEIDAV
Sbjct: 205 LARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFIDEIDAVGRHR 264
Query: 323 XXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVG 382
NDEREQTLNQLL EMDGF N GVI+IAATNRP++LDSAL RPGRFDRQV++
Sbjct: 265 GIGLGGGNDEREQTLNQLLVEMDGFESNEGVIIIAATNRPDVLDSALLRPGRFDRQVTIS 324
Query: 383 LPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANI 442
+PDI GRE+I+ VH DV++ IA TPGFSGADLANL+NEAA++A R K +
Sbjct: 325 IPDINGREKIINVHIKKVPTAPDVNIRTIARGTPGFSGADLANLVNEAALIAARLNKKIV 384
Query: 443 TLKEIDDSIDRIVAGME--GTKMTDGKNKILVAYHEIGHAVCATLTPGHDPVQKVTLIPR 500
T+ + + + D+++ G E MT+ + + L AYHE GHA+ A T DP+ K T+IPR
Sbjct: 385 TMSDFEYARDKVMMGAERKSLMMTEEERR-LTAYHEAGHAIIAFFTEASDPIHKATIIPR 443
Query: 501 GQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQITQI 560
G++ GL LPE D +++++ A + +GGRAAEE+IFG ++T+GA+ D++Q T +
Sbjct: 444 GRSLGLVMRLPESDRVSHTREKMIADLTVAMGGRAAEELIFGYHKVTSGASSDIKQATDL 503
Query: 561 ARQMVTRYGMSEIGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIESAYEV 620
A+ MV ++GMS+ + P + D +++S LA+ ID+ V+ I+ SA E
Sbjct: 504 AKAMVMKWGMSD-----KVGPLYHNDD------KNDTISNNLANLIDEEVKLIVTSALER 552
Query: 621 AKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVLS--EFT--DVSADQV 665
AK+ + + E++ + L+E ETL+G++ + +++ E T D+ QV
Sbjct: 553 AKSLLNEHLESLHIVAKNLLEFETLTGEDIKNIINGKELTKDDIEESQV 601
>TIGR_CMR|ECH_1098 [details] [associations]
symbol:ECH_1098 "ATP-dependent metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 GO:GO:0000910
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_507882.1 ProteinModelPortal:Q2GFA1
SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708 KEGG:ech:ECH_1098
PATRIC:20577534 BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 1167 (415.9 bits), Expect = 1.6e-118, P = 1.6e-118
Identities = 255/589 (43%), Positives = 372/589 (63%)
Query: 83 RMTYSRFLQYLDEGSVKKVDLFENGNVAIAEIFNQALDKIQRVKVQLPGLPQELLRKMKE 142
++ +S FL +D V+ +++ E+ N+ ++ + + K Q + + L++ +
Sbjct: 36 KLPFSEFLNKIDNNEVESINIGEH-NIT-GKLKDGS--KFQTTAI----VYDSLIKTLHN 87
Query: 143 KNVDFAARPMEMNWGVSLLDFLANFGFPXXXXXXXXXXXXXVNSPGGPNLPFGLGRSKAK 202
+ V F P + +GV L + L ++ FP GG N +S+AK
Sbjct: 88 QQVTFTFLPEDTFFGV-LSNILVSW-FPMLLLVIIWFIFLKRMQIGG-NRTINFSKSRAK 144
Query: 203 FEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTL 262
E VTF+DVAG+DEAK++ EIV FL+ ++F +G KIPKG LL+G PGTGKTL
Sbjct: 145 LMTENRNKVTFNDVAGIDEAKEELIEIVDFLKHRQRFQKLGGKIPKGCLLIGSPGTGKTL 204
Query: 263 LAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXX 322
LA+AIAGEA VPFFS+SGS+F+EMFVGVGASRVRD+F + K N+PC++FIDEIDAV
Sbjct: 205 LARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFIDEIDAVGRHR 264
Query: 323 XXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVG 382
NDEREQTLNQLL EMDGF N GVI+IAATNRP++LDSAL RPGRFDRQV++
Sbjct: 265 GIGLGGGNDEREQTLNQLLVEMDGFESNEGVIIIAATNRPDVLDSALLRPGRFDRQVTIS 324
Query: 383 LPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANI 442
+PDI GRE+I+ VH DV++ IA TPGFSGADLANL+NEAA++A R K +
Sbjct: 325 IPDINGREKIINVHIKKVPTAPDVNIRTIARGTPGFSGADLANLVNEAALIAARLNKKIV 384
Query: 443 TLKEIDDSIDRIVAGME--GTKMTDGKNKILVAYHEIGHAVCATLTPGHDPVQKVTLIPR 500
T+ + + + D+++ G E MT+ + + L AYHE GHA+ A T DP+ K T+IPR
Sbjct: 385 TMSDFEYARDKVMMGAERKSLMMTEEERR-LTAYHEAGHAIIAFFTEASDPIHKATIIPR 443
Query: 501 GQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQITQI 560
G++ GL LPE D +++++ A + +GGRAAEE+IFG ++T+GA+ D++Q T +
Sbjct: 444 GRSLGLVMRLPESDRVSHTREKMIADLTVAMGGRAAEELIFGYHKVTSGASSDIKQATDL 503
Query: 561 ARQMVTRYGMSEIGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIESAYEV 620
A+ MV ++GMS+ + P + D +++S LA+ ID+ V+ I+ SA E
Sbjct: 504 AKAMVMKWGMSD-----KVGPLYHNDD------KNDTISNNLANLIDEEVKLIVTSALER 552
Query: 621 AKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVLS--EFT--DVSADQV 665
AK+ + + E++ + L+E ETL+G++ + +++ E T D+ QV
Sbjct: 553 AKSLLNEHLESLHIVAKNLLEFETLTGEDIKNIINGKELTKDDIEESQV 601
>UNIPROTKB|Q2GIT4 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 1143 (407.4 bits), Expect = 5.6e-116, P = 5.6e-116
Identities = 254/573 (44%), Positives = 361/573 (63%)
Query: 86 YSRFLQYLDEGSVKKVDLFENGNVAIAEIFNQALDKIQRVKVQLPGLPQE-LLRKMKEKN 144
+S FL L++GSV+ V + E+ I+ F+ VK + G+ + L++ M +
Sbjct: 41 FSEFLVRLEDGSVESVSITEH---EISGKFHNG------VKFRTHGVVYDGLIKTMHAQK 91
Query: 145 VDFAARPMEMNWGVSLLDFLANFGFPXXXXXXXXXXXXXVNSPGGPNLPFGLGRSKAKFE 204
V F E+ +S++ L P GG N G +S+A+
Sbjct: 92 VMFEF-VSEVTL-LSVIGSLFVSCLPMLSLVVIWCLFLKQMQLGG-NRTMGFSKSRARLM 148
Query: 205 MEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLA 264
+ VTFDDVAG++EAK++ EIV FL+ +KF +G KIPKG LL+G PGTGKTLLA
Sbjct: 149 TDSRGKVTFDDVAGIEEAKEELIEIVDFLKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLA 208
Query: 265 KAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXX 324
+AIAGEA VPFFS+SGS+F+EMFVGVGASRVRD+F + K ++PC++F+DEIDAV
Sbjct: 209 RAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVGRHRGI 268
Query: 325 XXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLP 384
NDEREQTLNQLL EMDGF N GV++IAATNRP++LD AL RPGRFDRQV++ +P
Sbjct: 269 GLGGGNDEREQTLNQLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFDRQVTISIP 328
Query: 385 DIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITL 444
DI GRE+I+ VH+ L DV L VIA TPGFSGADLANL+NEAA++A R K +T+
Sbjct: 329 DINGREKIIAVHAKKVPLAPDVDLRVIARGTPGFSGADLANLVNEAALIAARLDKKIVTM 388
Query: 445 KEIDDSIDRIVAGMEGTKMT-DGKNKILVAYHEIGHAVCATLTPGHDPVQKVTLIPRGQA 503
+ + + D+++ G E M + + L AYHE GHAV A P DP+ K T+IPRG++
Sbjct: 389 CDFEYARDKVMMGAERKSMVMREEERRLTAYHEAGHAVVAFHNPASDPIHKATIIPRGRS 448
Query: 504 RGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQITQIARQ 563
GL LPE D +++++ A + +GGRAAEE+IFG ++T+GA+ D++Q T +A+
Sbjct: 449 LGLVMRLPETDRVSHTREKMLADLTVAMGGRAAEELIFGYNKVTSGASSDIKQATDLAKS 508
Query: 564 MVTRYGMSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIESAYEVAK 622
MV ++GMS+ +GP + SD A +S LA+ ID V++I+ +A AK
Sbjct: 509 MVMKWGMSDSVGP-------LYHSDE-----AHERISTNLANLIDDEVKSIVSTALAEAK 556
Query: 623 NHIRNNREAIDKLVDVLMEKETLSGDEFRAVLS 655
+ + + +A+ + L+E ETL+GD+ +++
Sbjct: 557 DVLTKHSDALHAIAANLLEFETLTGDDIADIIA 589
>TIGR_CMR|APH_1179 [details] [associations]
symbol:APH_1179 "ATP-dependent metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0000910 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 1143 (407.4 bits), Expect = 5.6e-116, P = 5.6e-116
Identities = 254/573 (44%), Positives = 361/573 (63%)
Query: 86 YSRFLQYLDEGSVKKVDLFENGNVAIAEIFNQALDKIQRVKVQLPGLPQE-LLRKMKEKN 144
+S FL L++GSV+ V + E+ I+ F+ VK + G+ + L++ M +
Sbjct: 41 FSEFLVRLEDGSVESVSITEH---EISGKFHNG------VKFRTHGVVYDGLIKTMHAQK 91
Query: 145 VDFAARPMEMNWGVSLLDFLANFGFPXXXXXXXXXXXXXVNSPGGPNLPFGLGRSKAKFE 204
V F E+ +S++ L P GG N G +S+A+
Sbjct: 92 VMFEF-VSEVTL-LSVIGSLFVSCLPMLSLVVIWCLFLKQMQLGG-NRTMGFSKSRARLM 148
Query: 205 MEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLA 264
+ VTFDDVAG++EAK++ EIV FL+ +KF +G KIPKG LL+G PGTGKTLLA
Sbjct: 149 TDSRGKVTFDDVAGIEEAKEELIEIVDFLKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLA 208
Query: 265 KAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXX 324
+AIAGEA VPFFS+SGS+F+EMFVGVGASRVRD+F + K ++PC++F+DEIDAV
Sbjct: 209 RAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVGRHRGI 268
Query: 325 XXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLP 384
NDEREQTLNQLL EMDGF N GV++IAATNRP++LD AL RPGRFDRQV++ +P
Sbjct: 269 GLGGGNDEREQTLNQLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFDRQVTISIP 328
Query: 385 DIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITL 444
DI GRE+I+ VH+ L DV L VIA TPGFSGADLANL+NEAA++A R K +T+
Sbjct: 329 DINGREKIIAVHAKKVPLAPDVDLRVIARGTPGFSGADLANLVNEAALIAARLDKKIVTM 388
Query: 445 KEIDDSIDRIVAGMEGTKMT-DGKNKILVAYHEIGHAVCATLTPGHDPVQKVTLIPRGQA 503
+ + + D+++ G E M + + L AYHE GHAV A P DP+ K T+IPRG++
Sbjct: 389 CDFEYARDKVMMGAERKSMVMREEERRLTAYHEAGHAVVAFHNPASDPIHKATIIPRGRS 448
Query: 504 RGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQITQIARQ 563
GL LPE D +++++ A + +GGRAAEE+IFG ++T+GA+ D++Q T +A+
Sbjct: 449 LGLVMRLPETDRVSHTREKMLADLTVAMGGRAAEELIFGYNKVTSGASSDIKQATDLAKS 508
Query: 564 MVTRYGMSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIESAYEVAK 622
MV ++GMS+ +GP + SD A +S LA+ ID V++I+ +A AK
Sbjct: 509 MVMKWGMSDSVGP-------LYHSDE-----AHERISTNLANLIDDEVKSIVSTALAEAK 556
Query: 623 NHIRNNREAIDKLVDVLMEKETLSGDEFRAVLS 655
+ + + +A+ + L+E ETL+GD+ +++
Sbjct: 557 DVLTKHSDALHAIAANLLEFETLTGDDIADIIA 589
>UNIPROTKB|P0C5C0 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP;IDA] [GO:0006979 "response
to oxidative stress" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0040007
"growth" evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0040007 GO:GO:0006979 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
EMBL:BX842583 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0010468
HOGENOM:HOG000217276 KO:K03798 PIR:C70956 RefSeq:NP_218127.1
RefSeq:NP_338259.1 RefSeq:YP_006517099.1 ProteinModelPortal:P0C5C0
SMR:P0C5C0 PRIDE:P0C5C0 EnsemblBacteria:EBMYCT00000001212
EnsemblBacteria:EBMYCT00000069111 GeneID:13317218 GeneID:885732
GeneID:926520 KEGG:mtc:MT3714 KEGG:mtu:Rv3610c KEGG:mtv:RVBD_3610c
PATRIC:18129921 TubercuList:Rv3610c OMA:RSEMIAR
ProtClustDB:CLSK792593 Uniprot:P0C5C0
Length = 760
Score = 1131 (403.2 bits), Expect = 1.0e-114, P = 1.0e-114
Identities = 247/547 (45%), Positives = 343/547 (62%)
Query: 116 NQALDKIQRVKVQLP-GLPQELLRKMKEKNVDFAARPMEMNWGVSLLDFLANFGFPXXXX 174
N D ++V + P G +L + KN + +N G S+L L + P
Sbjct: 70 NNETDGSEKVITKYPTGYAVDLFNALSAKNAKVST---VVNQG-SILGELLVYVLPLLLL 125
Query: 175 XXXXXXXXXVNSPGGPNLPFGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQ 234
+ GG + FG G+S+AK + TF DVAGVDEA ++ EI FLQ
Sbjct: 126 VGLFVMFSRMQ--GGARMGFGFGKSRAKQLSKDMPKTTFADVAGVDEAVEELYEIKDFLQ 183
Query: 235 TPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASR 294
P ++ A+GAKIPKGVLL GPPGTGKTLLA+A+AGEAGVPFF++SGS+F+EMFVGVGASR
Sbjct: 184 NPSRYQALGAKIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASR 243
Query: 295 VRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVI 354
VRDLF +AK NSPC++F+DEIDAV +DEREQTLNQLL EMDGF +GVI
Sbjct: 244 VRDLFEQAKQNSPCIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVI 303
Query: 355 VIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATR 414
+IAATNRP+ILD AL RPGRFDRQ+ V PD+ GR +L+VHS K + D L +A R
Sbjct: 304 LIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKR 363
Query: 415 TPGFSGADLANLMNEAAILAGRRGKANITLKEIDDSIDRIVAG--MEGTKMTDGKNKILV 472
T G +GADLAN++NEAA+L R IT +++++DR++ G +G +++ + KI
Sbjct: 364 TVGMTGADLANVINEAALLTARENGTVITGPALEEAVDRVIGGPRRKGRIISEQEKKI-T 422
Query: 473 AYHEIGHAVCATLTPGHDPVQKVTLIPRGQARGLTWFLPEEDPALISKQQLFARIVGGLG 532
AYHE GH + A P +P+ KVT++ RG+ G +PEED L ++ ++ A++V +G
Sbjct: 423 AYHEGGHTLAAWAMPDIEPIYKVTILARGRTGGHAVAVPEEDKGLRTRSEMIAQLVFAMG 482
Query: 533 GRAAEEVIFGEAEITTGAAGDLQQITQIARQMVTRYGMS-EIGPWTLIDPSVQSSDVVM- 590
GRAAEE++F E TTGA D++Q T+IAR MVT +GMS ++G + + D +
Sbjct: 483 GRAAEELVFREP--TTGAVSDIEQATKIARSMVTEFGMSSKLGA---VKYGSEHGDPFLG 537
Query: 591 -RMLARNSMSEKLADDIDKTVRNIIESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDE 649
M + S ++A +ID+ VR +IE+A+ A + R+ +D L L+EKETL E
Sbjct: 538 RTMGTQPDYSHEVAREIDEEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPE 597
Query: 650 FRAVLSE 656
++ ++
Sbjct: 598 LESIFAD 604
>TIGR_CMR|CJE_1259 [details] [associations]
symbol:CJE_1259 "cell division protein FtsH"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
OMA:RARASMP RefSeq:YP_179247.1 ProteinModelPortal:Q5HTY8 SMR:Q5HTY8
STRING:Q5HTY8 GeneID:3231766 KEGG:cjr:CJE1259 PATRIC:20044314
ProtClustDB:CLSK872348 BioCyc:CJEJ195099:GJC0-1285-MONOMER
Uniprot:Q5HTY8
Length = 645
Score = 1130 (402.8 bits), Expect = 1.3e-114, P = 1.3e-114
Identities = 260/584 (44%), Positives = 356/584 (60%)
Query: 81 SNRMTYSRFLQYLDEGSVKKVDLFENGNVAIAEIFNQALDKIQRVKVQLPGLPQELLRKM 140
+ + YS + ++ G + +V + + AI+ N KV P EL+ +
Sbjct: 57 NKNVPYSELKKLIESGQINQVSIGQTTIKAISSSHNTVYTA---KKVNDP----ELVSLL 109
Query: 141 KEKNVDFAARPMEMNWGVSLLDFLANFGFPXXXXXXX-XXXXXXVNSPGGPNLPFGLGRS 199
KN+ + A E NW D L ++ P + G ++ G+G S
Sbjct: 110 DSKNIAYGAYS-ETNW---FTDILFSWVLPVFIFFGIWMFLASRMQKNMGSSI-LGIGSS 164
Query: 200 KAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTG 259
K E V F DVAGV+EAK++ +EIV FL+ PE++ +GAKIPKG+LLVGPPGTG
Sbjct: 165 KKLVNSE-KPKVKFSDVAGVEEAKEEVKEIVDFLKYPERYIKLGAKIPKGLLLVGPPGTG 223
Query: 260 KTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVX 319
KTLLAKA+AGEA VPFFS+SGS FIEMFVGVGASRVRDLF AK +P +VFIDEIDA+
Sbjct: 224 KTLLAKAVAGEADVPFFSVSGSSFIEMFVGVGASRVRDLFENAKKEAPAIVFIDEIDAIG 283
Query: 320 XXXXXXXXXX-NDEREQTLNQLLTEMDGF-TGNSGVIVIAATNRPEILDSALHRPGRFDR 377
NDEREQTLNQLL EMDGF T +S VIV+AATNRPE+LD+AL RPGRFDR
Sbjct: 284 KSRAASGMMGGNDEREQTLNQLLAEMDGFGTESSPVIVLAATNRPEVLDAALLRPGRFDR 343
Query: 378 QVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRR 437
QV V PD +GR ILKVH + K+ V + IA T G +GADLAN++NEAA+LAGR
Sbjct: 344 QVLVDKPDFKGRCDILKVHMKDVKISPKVKVEDIARLTAGLAGADLANIINEAALLAGRD 403
Query: 438 GKANITLKEIDDSIDRIVAGMEG-TKMTDGKNKILVAYHEIGHAVCATLTPGHDPVQKVT 496
K + ++ ++++R +AG+E ++ + K K +V YHE GHA+ A T G V KV+
Sbjct: 404 SKKYVEQNDLVEAVERAIAGLEKKSRRINEKEKKIVTYHECGHALIAETTKGAKRVSKVS 463
Query: 497 LIPRGQAR-GLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQ 555
+IPRG A G T PEE+ L+ K +L A + LGGRAAEEV GE I+TGA+ DL+
Sbjct: 464 VIPRGLAALGYTLNTPEENKFLMQKHELIAEVDVLLGGRAAEEVFIGE--ISTGASNDLE 521
Query: 556 QITQIARQMVTRYGMSEIGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIE 615
+ T I + M++ YGMSEI +++ Q + + SEK+A+ +D V+ ++
Sbjct: 522 RATDIIKAMISMYGMSEIAGLMVLEK--QRNTFLSGGQTIKDYSEKMAESLDDYVKKTLD 579
Query: 616 SAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVLSEFTD 659
Y+ K+ + + AI+ +V L E+ET+ G++ R ++ EF D
Sbjct: 580 ERYKDVKDTLNTYKGAIETMVAALYEEETIEGNKVREIIKEFED 623
>TIGR_CMR|GSU_1180 [details] [associations]
symbol:GSU_1180 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952233.1 ProteinModelPortal:Q74DY5 SMR:Q74DY5
GeneID:2686793 KEGG:gsu:GSU1180 PATRIC:22025134 OMA:VCQWGMS
ProtClustDB:CLSK828230 BioCyc:GSUL243231:GH27-1166-MONOMER
Uniprot:Q74DY5
Length = 617
Score = 1120 (399.3 bits), Expect = 1.5e-113, P = 1.5e-113
Identities = 263/588 (44%), Positives = 353/588 (60%)
Query: 84 MTYSRFLQYLDEGSVKKVDLFENGNVAIAEIFNQ------ALDK-IQRVKVQL----PGL 132
++YSRF L G++K++ + G + N+ A DK + R + P +
Sbjct: 37 VSYSRFRAELAAGNIKRITI--KGTTIAGDFRNKITVDQPAGDKTVARETAKFSTVKPAI 94
Query: 133 PQ-ELLRKMKEKNVDFAARPMEMNWGVSLLDFLANFGFPXXXXXXXXXXXXXVNSPGGPN 191
L+ ++ KNV+ A E + VS L ++ P GP
Sbjct: 95 DDPSLMADLQAKNVEVTAVTTETSPIVSGLLYV----LPWILIIGVWWLAMRGMRGQGPT 150
Query: 192 LPFG-LGRSKAK-FEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKG 249
G +S AK + VTFDDVAG++ K + +EIV +L+ P+KF +G K+PKG
Sbjct: 151 SVMGNFSKSGAKMYTPSAKVKVTFDDVAGMENPKMELKEIVDYLRDPKKFQRIGGKVPKG 210
Query: 250 VLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCL 309
VLLVGPPGTGKTLLA+A+AGEA V F S+S S+FIEMFVGVGA RVRDLF AK ++P +
Sbjct: 211 VLLVGPPGTGKTLLARAVAGEADVTFLSISASQFIEMFVGVGAGRVRDLFATAKKSAPSI 270
Query: 310 VFIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSAL 369
+FIDE+DAV +DEREQTLNQLL+EMDGF + VIV+AATNRP++LD AL
Sbjct: 271 IFIDELDAVGRSRGAGLGGGHDEREQTLNQLLSEMDGFDSHDEVIVMAATNRPDVLDPAL 330
Query: 370 HRPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNE 429
RPGRFDR V + PD R RE+IL VH+ LDKDV L+VIA TPG +GADL NL+NE
Sbjct: 331 LRPGRFDRHVVIDRPDWRDREKILHVHTRKIPLDKDVDLAVIARGTPGMAGADLENLVNE 390
Query: 430 AAILAGRRGKANITLKEIDDSIDRIVAGMEGTKMTDGKNKILVAYHEIGHAVCATLTPGH 489
AAILA R A +T++ ++ + D+++ G E + K + AYHE GH + A L PG
Sbjct: 391 AAILAARENAATVTMEHMERAKDKVLMGGERKMFITEQEKRITAYHEAGHTIVAKLLPGT 450
Query: 490 DPVQKVTLIPRGQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTG 549
DPV KVT+IPRGQA G+T LPE+D K L R+ LGGR AE +FG+ ++TG
Sbjct: 451 DPVHKVTIIPRGQALGVTQQLPEDDRYHYPKSYLMNRLSVALGGRQAERAVFGD--LSTG 508
Query: 550 AAGDLQQITQIARQMVTRYGMSE-IGPWTLIDPSVQSSDVVMRMLARN-SMSEKLADDID 607
A DL+ + +A +MV ++GMS+ IG T + + R LA + SE++A ID
Sbjct: 509 AQNDLKMVNDLAEKMVCQWGMSDKIGAMTF--SRGEEHPFLGRKLAEEKTFSEQMAWLID 566
Query: 608 KTVRNIIESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVLS 655
+ + II+ A + A N I NNR +D LVD LME+ETL G VL+
Sbjct: 567 QEIAAIIKEAEQKADNVIANNRGKLDALVDALMEEETLDGKRIDEVLA 614
>DICTYBASE|DDB_G0284249 [details] [associations]
symbol:DDB_G0284249 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006461 "protein complex assembly" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0044351 "macropinocytosis" evidence=RCA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284249 GO:GO:0016021 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0006461 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:AAFI02000064 RefSeq:XP_638674.1 ProteinModelPortal:Q54PX1
SMR:Q54PX1 MEROPS:M41.A17 EnsemblProtists:DDB0229917 GeneID:8624503
KEGG:ddi:DDB_G0284249 InParanoid:Q54PX1 OMA:VSIYGMN
ProtClustDB:CLSZ2846729 Uniprot:Q54PX1
Length = 764
Score = 1053 (375.7 bits), Expect = 3.1e-108, Sum P(2) = 3.1e-108
Identities = 228/470 (48%), Positives = 312/470 (66%)
Query: 191 NLPFGLGRSKA-KFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKG 249
N F G+S A KFE +T V F DVAG+ EAK + +E V FL+ P+KF +GAKIP+G
Sbjct: 279 NKMFSQGKSTANKFEKSTST-VKFSDVAGLGEAKVEIEEFVNFLKNPKKFHDIGAKIPRG 337
Query: 250 VLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCL 309
+LVGPPGTGKTL+AKA AGEA VPF+S SGS+F+EMFVGVG SRVRDLF +A+ N+PC+
Sbjct: 338 AILVGPPGTGKTLIAKATAGEANVPFYSTSGSDFVEMFVGVGPSRVRDLFEQARKNAPCI 397
Query: 310 VFIDEIDAVXXXXXXXXXX-XNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSA 368
VFIDEIDAV NDERE TLNQLL EMDGF V+V+AATNRP+ILD A
Sbjct: 398 VFIDEIDAVGRARGKGGFSGSNDERENTLNQLLVEMDGFKPLKNVVVLAATNRPDILDKA 457
Query: 369 LHRPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSV-IATRTPGFSGADLANLM 427
L RPGRFDRQ+++ PD++ RE+I +VH LDK ++ + ++ TPGFSGAD+AN+
Sbjct: 458 LLRPGRFDRQITIDNPDLKSREEIFRVHLAALLLDKSINYAERLSKLTPGFSGADIANVC 517
Query: 428 NEAAILAGRRGKANITLKEIDDSIDRIVAGMEG-TKMTDGKNKILVAYHEIGHAVCATLT 486
NEAA++A RR ITL+ D ++DR++ G+E K+ K VAYHE GHAV +
Sbjct: 518 NEAALIAARRHAEIITLEHFDAAVDRVIGGLEKKNKVLSPTEKRTVAYHEAGHAVVSWFL 577
Query: 487 PGHDPVQKVTLIPRGQAR-GLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAE 545
P+ KV+++PRG A G +LP+E L +++Q+F + LGGR AE++ FG
Sbjct: 578 KHCHPLLKVSIVPRGVAALGYAQYLPKEQ-FLQNQEQIFDMMCMALGGRVAEQLTFGT-- 634
Query: 546 ITTGAAGDLQQITQIARQMVTRYGMSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLAD 604
ITTGA DL++IT++A V+ YGM+E IGP + SD+ SE+ A+
Sbjct: 635 ITTGAQDDLEKITKMAYSQVSIYGMNEKIGPLSY-QKGQDGSDLT------KPYSEETAE 687
Query: 605 DIDKTVRNIIESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVL 654
+D+ VR +++SAY+ ++ +RE + + ++L+EKE + +E AVL
Sbjct: 688 VMDEEVRKLLKSAYDRTTQVLQEHREGLISVANLLLEKEVIHFEEVEAVL 737
Score = 37 (18.1 bits), Expect = 3.1e-108, Sum P(2) = 3.1e-108
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 18 QDVAKDTHIPKSTFRESPFHK 38
+ V D IPKS F +H+
Sbjct: 228 EKVQSDLGIPKSQFIPISYHE 248
>ASPGD|ASPL0000029469 [details] [associations]
symbol:AN5588 species:162425 "Emericella nidulans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006457 "protein
folding" evidence=IEA] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0031942 "i-AAA
complex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:SEFDEVY EnsemblFungi:CADANIAT00003489
Uniprot:C8VG17
Length = 784
Score = 1031 (368.0 bits), Expect = 4.5e-107, Sum P(2) = 4.5e-107
Identities = 225/481 (46%), Positives = 317/481 (65%)
Query: 204 EMEP-NTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTL 262
E +P + V F DV G DEAK + QE+V+FL PE+F+++G K+PKGVLLVGPPGTGKTL
Sbjct: 304 EAQPEHQTVRFSDVHGCDEAKDELQELVEFLLNPERFSSLGGKLPKGVLLVGPPGTGKTL 363
Query: 263 LAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXX 322
LA+A+AGEAGVPFF +SGSEF E++VGVGA RVR+LFN+A++ SP ++FIDE+DA+
Sbjct: 364 LARAVAGEAGVPFFYMSGSEFDEVYVGVGAKRVRELFNQARSKSPAIIFIDELDAIGAKR 423
Query: 323 XXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVG 382
+QTLNQLLTE+DGF+ ++GVI++AATN PE+LD AL RPGRFDR+V V
Sbjct: 424 NERDAAYV---KQTLNQLLTELDGFSQSTGVIILAATNYPELLDKALTRPGRFDRKVVVD 480
Query: 383 LPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANI 442
LPD+RGR ILK H N ++ DV ++VIA T GFSGADL NL+N+AAI A R ++ +
Sbjct: 481 LPDVRGRMDILKHHMKNVQISTDVDVAVIARGTSGFSGADLENLVNQAAIFASRNKQSKV 540
Query: 443 TLKEIDDSIDRIVAGMEG-TKMTDGKNKILVAYHEIGHAVCATLTPGHDPVQKVTLIPRG 501
T K+ D + D+I+ G E +++ K+K+L AYHE GHA+ A +P P+ K+T++PRG
Sbjct: 541 TPKDFDYAKDKIIMGAEARSRIIQDKDKLLTAYHEAGHALVAYFSPSSMPLYKITIMPRG 600
Query: 502 QARGLTWFLPEEDPALISKQ--QLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQITQ 559
+ G T FLPE D ++SK Q + I +GG+ AEE+I+GE ++T+G + DL T+
Sbjct: 601 MSLGSTHFLPEMD--MVSKNYVQYLSDIDVSMGGKVAEELIYGEDKVTSGISADLASATR 658
Query: 560 IARQMVTRYGMSEIGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIESAYE 619
A +VTR+G S+ + + D+ +S+S + +I+ VR ++E A +
Sbjct: 659 TAFTLVTRFGYSK---------KLGNVDLYANY---DSLSSETKQEIEAEVRRLVEEARQ 706
Query: 620 VAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVL-SEFTD---VSADQVDRTPIRELIS 675
A N + R ++ L L++ ETL+ +E VL E D V AD + P E IS
Sbjct: 707 RATNILTERRHELELLTKALIKYETLTKEEMEKVLRGESLDRLVVPADAPMKLP--EPIS 764
Query: 676 A 676
A
Sbjct: 765 A 765
Score = 48 (22.0 bits), Expect = 4.5e-107, Sum P(2) = 4.5e-107
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 10 SHLPICKSQDVAKDTHIPKSTFRESPFHKT 39
S LPI K A + S F +SP H+T
Sbjct: 3 SQLPILKPNVSASGSWPSMSKFLKSPLHRT 32
>TAIR|locus:2057386 [details] [associations]
symbol:ftsh4 "FTSH protease 4" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA;ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=ISS] [GO:0016020
"membrane" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0009536 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
GO:GO:0005743 GO:GO:0046872 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
EMBL:AC004747 GO:GO:0004176 HOGENOM:HOG000217276 EMBL:AK220842
IPI:IPI00534293 PIR:T02610 RefSeq:NP_565616.1 UniGene:At.23415
ProteinModelPortal:O80983 SMR:O80983 STRING:O80983 MEROPS:M41.004
PaxDb:O80983 PRIDE:O80983 EnsemblPlants:AT2G26140.1 GeneID:817154
KEGG:ath:AT2G26140 GeneFarm:2508 TAIR:At2g26140 InParanoid:O80983
OMA:HTEGALP PhylomeDB:O80983 ProtClustDB:CLSN2688437
Genevestigator:O80983 Uniprot:O80983
Length = 717
Score = 1040 (371.2 bits), Expect = 4.6e-105, P = 4.6e-105
Identities = 222/467 (47%), Positives = 310/467 (66%)
Query: 195 GLGRSKAKFE-MEPN--TGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVL 251
G+G+ E ++P+ + F DV GVDEAK + +EIV +L+ P++F +G K+PKGVL
Sbjct: 205 GIGKGLGLHEEVQPSMDSSTKFSDVKGVDEAKAELEEIVHYLRDPKRFTRLGGKLPKGVL 264
Query: 252 LVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVF 311
LVGPPGTGKT+LA+AIAGEAGVPFFS SGSEF EMFVGVGA RVRDLF+ AK SPC++F
Sbjct: 265 LVGPPGTGKTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKCSPCIIF 324
Query: 312 IDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHR 371
IDEIDA+ + TLNQ+L E+DGF N G+IV+AATN PE LD AL R
Sbjct: 325 IDEIDAIGGSRNPKD---QQYMKMTLNQMLVELDGFKQNEGIIVVAATNFPESLDKALVR 381
Query: 372 PGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAA 431
PGRFDR + V PD+ GR QIL+ H + +DV L +IA TPGFSGADLANL+N AA
Sbjct: 382 PGRFDRHIVVPNPDVEGRRQILESHMSKVLKAEDVDLMIIARGTPGFSGADLANLVNVAA 441
Query: 432 ILAGRRGKANITLKEIDDSIDRIVAGMEG-TKMTDGKNKILVAYHEIGHAVCATLTPGHD 490
+ A G ++T+ +++ + DRI+ G E + + +++ L A+HE GHA+ A T G
Sbjct: 442 LKAAMDGSKDVTMSDLEFAKDRIMMGSERKSAVISDESRKLTAFHEGGHALVAIHTEGAL 501
Query: 491 PVQKVTLIPRGQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGA 550
PV K T++PRG A G+ LP++D IS++Q+ AR+ +GGR AEE+IFGE+E+T+GA
Sbjct: 502 PVHKATIVPRGMALGMVSQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGESEVTSGA 561
Query: 551 AGDLQQITQIARQMVTRYGMS-EIGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKT 609
+ DL+Q T++AR MVT++GMS E+G L+ + + SMS + I+
Sbjct: 562 SSDLEQATKLARAMVTKFGMSKEVG---LVAHNYDDNG--------KSMSTETRLLIESE 610
Query: 610 VRNIIESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVLSE 656
V+ ++E AY AK + + + L + L++ ETLSG + + +L++
Sbjct: 611 VKQLLEKAYNNAKTILTVYNKELHALANALLQHETLSGKQIKELLTD 657
>CGD|CAL0000075 [details] [associations]
symbol:AFG3 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005745 "m-AAA complex"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 678 (243.7 bits), Expect = 5.8e-105, Sum P(2) = 5.8e-105
Identities = 140/251 (55%), Positives = 170/251 (67%)
Query: 188 GGPNLPFGLGRSKAK-FEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKI 246
GGP F +G+SKAK F E + F DVAG DE+K++ E V+FLQ P K+ +GAKI
Sbjct: 260 GGPGGIFKIGKSKAKLFNQENEVKIKFKDVAGCDESKEEIMEFVKFLQDPHKYEKLGAKI 319
Query: 247 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANS 306
P+G +L GPPGTGKTLLAKA AGEAGVPF S+SGSEF+EMFVGVGASRVRDLF A+ +
Sbjct: 320 PRGAILSGPPGTGKTLLAKATAGEAGVPFLSVSGSEFVEMFVGVGASRVRDLFKTAREMA 379
Query: 307 PCLVFIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILD 366
P ++F+DEIDA+ NDERE TLNQLL EMDGF V+V+A TNRP+ILD
Sbjct: 380 PAIIFVDEIDAIGKERGNGRMGGNDERENTLNQLLVEMDGFDTTDHVVVLAGTNRPDILD 439
Query: 367 SALHRPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANL 426
AL RPGRFDR +S+ +PD+ GR+QI KVH N KL S+ I + + L
Sbjct: 440 KALLRPGRFDRHISIDVPDVEGRKQIFKVHLNKLKLK---SVQDIDAKQKDVDFSKYQQL 496
Query: 427 MNEAAI-LAGR 436
NE LAGR
Sbjct: 497 KNEEIEKLAGR 507
Score = 381 (139.2 bits), Expect = 5.8e-105, Sum P(2) = 5.8e-105
Identities = 87/241 (36%), Positives = 141/241 (58%)
Query: 411 IATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDSIDRIVAGMEG-TKMTDGKNK 469
+A TPGF+GAD+AN NE A++A R + + +I+R++AG+E +++ + K
Sbjct: 508 LAALTPGFAGADIANCCNEGALIAAREDAPAVDTYHFEQAIERVIAGLEKKSRILSPEEK 567
Query: 470 ILVAYHEIGHAVCATLTPGHDPVQKVTLIPRGQ-ARGLTWFLPEEDPALISKQQLFARIV 528
VAYHE GHA+C DP+ KV++IPRGQ A G +LP+ D L S++Q R++
Sbjct: 568 KTVAYHEAGHAICGWFLQYADPLVKVSIIPRGQGALGYAQYLPK-DQYLTSQEQFKHRMI 626
Query: 529 GGLGGRAAEEVIFGEAEITTGAAGDLQQITQIARQMVTRYGMSEIGPWTLIDPSVQSSDV 588
LGGR +EE+ F +T+GA+ D ++ITQ+A+QM+ + GMS+ D S SD
Sbjct: 627 MTLGGRVSEELHFDT--VTSGASDDFKKITQMAQQMILKLGMSDKLGQICYDTS---SDN 681
Query: 589 VMRMLARNSMSEKLADDIDKTVRNIIESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGD 648
++ SE A ID+ V+ +I+ +YE + + +DK+ + L +KE L+ +
Sbjct: 682 GNGFKVHHNYSETTARIIDEEVKRLIDESYEACHKLLTEKLDLVDKVAEELFKKEVLTRE 741
Query: 649 E 649
+
Sbjct: 742 D 742
>UNIPROTKB|Q5AJC2 [details] [associations]
symbol:AFG3 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 678 (243.7 bits), Expect = 5.8e-105, Sum P(2) = 5.8e-105
Identities = 140/251 (55%), Positives = 170/251 (67%)
Query: 188 GGPNLPFGLGRSKAK-FEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKI 246
GGP F +G+SKAK F E + F DVAG DE+K++ E V+FLQ P K+ +GAKI
Sbjct: 260 GGPGGIFKIGKSKAKLFNQENEVKIKFKDVAGCDESKEEIMEFVKFLQDPHKYEKLGAKI 319
Query: 247 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANS 306
P+G +L GPPGTGKTLLAKA AGEAGVPF S+SGSEF+EMFVGVGASRVRDLF A+ +
Sbjct: 320 PRGAILSGPPGTGKTLLAKATAGEAGVPFLSVSGSEFVEMFVGVGASRVRDLFKTAREMA 379
Query: 307 PCLVFIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILD 366
P ++F+DEIDA+ NDERE TLNQLL EMDGF V+V+A TNRP+ILD
Sbjct: 380 PAIIFVDEIDAIGKERGNGRMGGNDERENTLNQLLVEMDGFDTTDHVVVLAGTNRPDILD 439
Query: 367 SALHRPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANL 426
AL RPGRFDR +S+ +PD+ GR+QI KVH N KL S+ I + + L
Sbjct: 440 KALLRPGRFDRHISIDVPDVEGRKQIFKVHLNKLKLK---SVQDIDAKQKDVDFSKYQQL 496
Query: 427 MNEAAI-LAGR 436
NE LAGR
Sbjct: 497 KNEEIEKLAGR 507
Score = 381 (139.2 bits), Expect = 5.8e-105, Sum P(2) = 5.8e-105
Identities = 87/241 (36%), Positives = 141/241 (58%)
Query: 411 IATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDSIDRIVAGMEG-TKMTDGKNK 469
+A TPGF+GAD+AN NE A++A R + + +I+R++AG+E +++ + K
Sbjct: 508 LAALTPGFAGADIANCCNEGALIAAREDAPAVDTYHFEQAIERVIAGLEKKSRILSPEEK 567
Query: 470 ILVAYHEIGHAVCATLTPGHDPVQKVTLIPRGQ-ARGLTWFLPEEDPALISKQQLFARIV 528
VAYHE GHA+C DP+ KV++IPRGQ A G +LP+ D L S++Q R++
Sbjct: 568 KTVAYHEAGHAICGWFLQYADPLVKVSIIPRGQGALGYAQYLPK-DQYLTSQEQFKHRMI 626
Query: 529 GGLGGRAAEEVIFGEAEITTGAAGDLQQITQIARQMVTRYGMSEIGPWTLIDPSVQSSDV 588
LGGR +EE+ F +T+GA+ D ++ITQ+A+QM+ + GMS+ D S SD
Sbjct: 627 MTLGGRVSEELHFDT--VTSGASDDFKKITQMAQQMILKLGMSDKLGQICYDTS---SDN 681
Query: 589 VMRMLARNSMSEKLADDIDKTVRNIIESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGD 648
++ SE A ID+ V+ +I+ +YE + + +DK+ + L +KE L+ +
Sbjct: 682 GNGFKVHHNYSETTARIIDEEVKRLIDESYEACHKLLTEKLDLVDKVAEELFKKEVLTRE 741
Query: 649 E 649
+
Sbjct: 742 D 742
>TAIR|locus:2075581 [details] [associations]
symbol:ftsh7 "FTSH protease 7" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
GO:GO:0009535 EMBL:AL133292 GO:GO:0004176 HOGENOM:HOG000217276
KO:K03798 EMBL:AY099737 EMBL:BT000368 IPI:IPI00522102 PIR:T45642
RefSeq:NP_566889.1 UniGene:At.43767 ProteinModelPortal:Q9SD67
SMR:Q9SD67 MEROPS:M41.A04 PaxDb:Q9SD67 PRIDE:Q9SD67
EnsemblPlants:AT3G47060.1 GeneID:823859 KEGG:ath:AT3G47060
GeneFarm:2514 TAIR:At3g47060 InParanoid:Q9SD67 OMA:SNQVQKV
PhylomeDB:Q9SD67 ProtClustDB:CLSN2689036 Genevestigator:Q9SD67
Uniprot:Q9SD67
Length = 802
Score = 1010 (360.6 bits), Expect = 7.3e-105, Sum P(2) = 7.3e-105
Identities = 243/538 (45%), Positives = 327/538 (60%)
Query: 130 PGLPQELLRKMKEKNVDFAARPMEMNWGVSLLDFLANFGFPXXXXXXXXXXXXXVNSPGG 189
PG + KM NV+F + P + + G +A F +S G
Sbjct: 243 PGDIKTPYEKMLGNNVEFGS-PEKRSGGFFNSALIALFYIAVLAGLIRFPVSFSTSSTGQ 301
Query: 190 PNLPFGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKG 249
G K T +TF DVAGVDEAK++ +EIV+FL+ PEK+ +GA+ P+G
Sbjct: 302 LRTRKAGGPDGGKVSGGGET-ITFADVAGVDEAKEELEEIVEFLRNPEKYVRLGARPPRG 360
Query: 250 VLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCL 309
VLLVG PGTGKTLLAKA+AGEA VPF S S SEF+E++VG+GASRVRDLF +AK +P +
Sbjct: 361 VLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSI 420
Query: 310 VFIDEIDAVXXXXXXXXXX-XNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSA 368
+FIDEIDAV NDEREQTLNQLLTEMDGF NS VIV+ ATNR ++LD A
Sbjct: 421 IFIDEIDAVAKSRDGKFRMGSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRADVLDPA 480
Query: 369 LHRPGRFDRQVSVGLPDIRGREQILKVHSNNKKLD--KDVSLSVIATRTPGFSGADLANL 426
L RPGRFDR V+V PD GRE IL+VH + K+L DV+L IA+ T GF+GADLANL
Sbjct: 481 LRRPGRFDRVVTVETPDKIGRESILRVHVSKKELPLGDDVNLGSIASMTTGFTGADLANL 540
Query: 427 MNEAAILAGRRGKANITLKEIDDSIDRIVAGMEG-TKMTDGKNKILVAYHEIGHAVCAT- 484
+NEAA+LAGR+ K N+ + +++R +AG+E + G K +VA HE GHAV T
Sbjct: 541 VNEAALLAGRKNKTNVEKIDFIQAVERSIAGIEKKSARLKGNEKAVVARHEAGHAVVGTA 600
Query: 485 ---LTPGHDPVQKVTLIPR-GQARGLTWFLP-EEDPALISKQQLFARIVGGLGGRAAEEV 539
L G V+K++++PR G A G T+ P ED L+ +L R+V LGGRAAEEV
Sbjct: 601 VANLLTGQPRVEKLSILPRTGGALGFTYIPPTSEDRYLLFIDELLGRLVTLLGGRAAEEV 660
Query: 540 IFGEAEITTGAAGDLQQITQIARQMVTRYGMSE-IGPWTLIDPSVQS-SDVVMRMLARNS 597
++ I+TGA D+++ T +A + V YG+++ IGP ++ S D R+
Sbjct: 661 VYS-GRISTGAFDDIRRATDMAYKAVAEYGLNQKIGPVSVATLSGGGIDDSGGSPWGRDQ 719
Query: 598 MSEKLADDIDKTVRNIIESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVLS 655
KL D + K V +++SA +VA + +R N + ++ L L EKE + G+E + LS
Sbjct: 720 --GKLVDLVQKEVTILLQSALDVALSVVRANPDVLEGLGAQLEEKEKVEGEELQKWLS 775
Score = 48 (22.0 bits), Expect = 7.3e-105, Sum P(2) = 7.3e-105
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 67 PAKSTEPESPIEYTSNRMTYSRFLQYLDEGSVKKVDL 103
P +EP I+ T + YS FL ++ V+KV++
Sbjct: 162 PLPGSEPR--IQTTFVSVPYSEFLSKVNSNQVQKVEV 196
>FB|FBgn0036702 [details] [associations]
symbol:CG6512 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0046331
"lateral inhibition" evidence=IMP] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AE014296
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0030163 GO:GO:0046331
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OMA:YSEDTAM HSSP:Q9LCZ4 UniGene:Dm.986 GeneID:39922
KEGG:dme:Dmel_CG6512 FlyBase:FBgn0036702 GenomeRNAi:39922
NextBio:816090 EMBL:AY084199 RefSeq:NP_730248.2 SMR:Q8T4G5
IntAct:Q8T4G5 MINT:MINT-1004758 STRING:Q8T4G5
EnsemblMetazoa:FBtr0075251 UCSC:CG6512-RA InParanoid:Q8T4G5
Uniprot:Q8T4G5
Length = 826
Score = 1037 (370.1 bits), Expect = 9.5e-105, P = 9.5e-105
Identities = 228/469 (48%), Positives = 300/469 (63%)
Query: 189 GPNLPFGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPK 248
G L G+ +S AK GV F DVAG +EAK + E V FL+ P+++ +GAKIPK
Sbjct: 303 GGGLFGGVMQSTAKLTNPNEIGVGFKDVAGCEEAKIEIMEFVNFLKNPQQYIDLGAKIPK 362
Query: 249 GVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPC 308
G +L GPPGTGKTLLAKA AGEA VPF ++SGSEF+EMFVGVG SRVRD+F A+ ++PC
Sbjct: 363 GAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFAMARKHAPC 422
Query: 309 LVFIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSA 368
++FIDEIDAV + E+E TLNQLL EMDGF + V+V+AATNR +ILD A
Sbjct: 423 ILFIDEIDAVGRKRGGKTFGGHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDILDKA 482
Query: 369 LHRPGRFDRQVSVGLPDIRGREQILKVHSNNKK--LDKDVSLSVIATRTPGFSGADLANL 426
L RPGRFDRQ+ V PDI+GR I KVH N K LDK+ +A TPGF+GAD+AN+
Sbjct: 483 LMRPGRFDRQIYVPAPDIKGRASIFKVHLGNLKTSLDKNELSRKMAALTPGFTGADIANV 542
Query: 427 MNEAAILAGRRGKANITLKEIDDSIDRIVAGMEG-TKMTDGKNKILVAYHEIGHAVCATL 485
NEAA++A R K +I LK + +I+R++AGME T + + K VA+HE GHAV
Sbjct: 543 CNEAALIAARDSKDSIVLKHFEQAIERVIAGMEKKTNVLAPEEKRTVAHHEAGHAVAGWF 602
Query: 486 TPGHDPVQKVTLIPRGQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAE 545
DP+ KV++IPRG+ G +LP+ D L+SK+QLF R+ LGGR AEE+ F
Sbjct: 603 LEHADPLLKVSIIPRGKGLGYAQYLPK-DHYLLSKEQLFDRMCMTLGGRVAEELFFNR-- 659
Query: 546 ITTGAAGDLQQITQIARQMVTRYGMSEIGPWTLIDPSVQSSDVVMRMLARNSMSEKLADD 605
ITTGA DL++IT IA V R+GM+E D Q+ D V SE A
Sbjct: 660 ITTGAQDDLKKITDIAYSQVVRFGMNEKVGQVSFDVG-QAGDPVFS----KPYSEDTAQL 714
Query: 606 IDKTVRNIIESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVL 654
ID VR+II+ A+E + + ++E + K+ + L++ E LS D+ +L
Sbjct: 715 IDNEVRSIIKCAHEATTSLLTKHKENVQKVAERLLQNEVLSRDDMIELL 763
>ASPGD|ASPL0000072959 [details] [associations]
symbol:AN4557 species:162425 "Emericella nidulans"
[GO:0097002 "mitochondrial inner boundary membrane" evidence=IEA]
[GO:0005745 "m-AAA complex" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006461 "protein
complex assembly" evidence=IEA] [GO:0006465 "signal peptide
processing" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:LYRFVTT MEROPS:M41.002 OrthoDB:EOG4J14HG
EMBL:BN001303 EMBL:AACD01000078 RefSeq:XP_662161.1
ProteinModelPortal:Q5B4H3 SMR:Q5B4H3 STRING:Q5B4H3
EnsemblFungi:CADANIAT00005881 GeneID:2872358 KEGG:ani:AN4557.2
Uniprot:Q5B4H3
Length = 883
Score = 1035 (369.4 bits), Expect = 1.6e-104, P = 1.6e-104
Identities = 219/479 (45%), Positives = 306/479 (63%)
Query: 185 NSPGGPNLPFGLGRSKAK-FEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVG 243
++ G N FG+G+S+A+ F E + + F DVAG+DEAK + E V FL++PE+F +G
Sbjct: 372 SASAGRNGIFGIGKSRARRFNHETDVKIKFSDVAGMDEAKVEIMEFVSFLKSPERFQKLG 431
Query: 244 AKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAK 303
AKIP+G +L GPPGTGKTLLAKA AGE+GVPFFS+SGSEF+EMFVGVG SRVRDLF A+
Sbjct: 432 AKIPRGAILSGPPGTGKTLLAKATAGESGVPFFSVSGSEFVEMFVGVGPSRVRDLFANAR 491
Query: 304 ANSPCLVFIDEIDAVXXXXXXXXXXX-NDEREQTLNQLLTEMDGFTGNSGVIVIAATNRP 362
N+PC++FIDEIDA+ NDERE TLNQ+LTEMDGF + V+V+A TNRP
Sbjct: 492 KNTPCIIFIDEIDAIGKSRSAKNFSGGNDERESTLNQILTEMDGFNTSDQVVVLAGTNRP 551
Query: 363 EILDSALHRPGRFDRQVSVGLPDIRGREQILKVHSNN--KKLDKDVSLSVIATRTPGFSG 420
++LD AL RPGRFDR +S+ P + GR+QI +VH K D D ++ TPGF+G
Sbjct: 552 DVLDKALMRPGRFDRHISIDRPTMDGRKQIFRVHLKKIVTKEDMDYLTGRLSALTPGFAG 611
Query: 421 ADLANLMNEAAILAGRRGKANITLKEIDDSIDRIVAGMEGTKMT-DGKNKILVAYHEIGH 479
AD+AN +NEAA++A R ++T+K + +I+R+V G+E + + K VAYHE GH
Sbjct: 612 ADIANCVNEAALVAARENAESVTMKHFERAIERVVGGLEKKSLVLSPEEKRTVAYHEAGH 671
Query: 480 AVCATLTPGHDPVQKVTLIPRGQ-ARGLTWFLPEE-DPALISKQQLFARIVGGLGGRAAE 537
A+C DP+ KV++IPRGQ A G +LP D L++ Q+ R+ LGGR +E
Sbjct: 672 AICGWYFRWADPLLKVSIIPRGQGALGYAQYLPANGDTYLMTANQMMDRMAMTLGGRVSE 731
Query: 538 EVIFGEAEITTGAAGDLQQITQIARQMVTRYGMSEIGPWTLI--DPSVQSSDVVMRMLAR 595
E+ F +T+GA+ D ++T++A MVT++GMS + DPS Q
Sbjct: 732 ELHFDT--VTSGASDDFNKVTRLATAMVTKFGMSPKLKYIYYEEDPSSQ---------LH 780
Query: 596 NSMSEKLADDIDKTVRNIIESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVL 654
SE+ A DID VR I+ AY+ ++ + ++ + + + L+ KE LS D+ +L
Sbjct: 781 KPFSEETAKDIDIEVRRIVNEAYKQCRDLLTAKKKEVGLVAEELLAKEVLSRDDMVRLL 839
>CGD|CAL0004443 [details] [associations]
symbol:orf19.2057 species:5476 "Candida albicans" [GO:0005745
"m-AAA complex" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 CGD:CAL0004443 GO:GO:0016021
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 EMBL:AACQ01000031 EMBL:AACQ01000030
MEROPS:M41.003 RefSeq:XP_719505.1 RefSeq:XP_719629.1
ProteinModelPortal:Q5AD10 SMR:Q5AD10 GeneID:3638753 GeneID:3638884
KEGG:cal:CaO19.2057 KEGG:cal:CaO19.9604 Uniprot:Q5AD10
Length = 846
Score = 1035 (369.4 bits), Expect = 1.6e-104, P = 1.6e-104
Identities = 241/590 (40%), Positives = 348/590 (58%)
Query: 84 MTYSRFL-QYLDEGSVKKVDLFENGNVAIAEIFNQALDKIQRVKVQLP-GLPQELLRKMK 141
+ + F+ YL + VKKV + N V + N A Q+ ++ G + R ++
Sbjct: 235 INFQSFVTDYLTKNLVKKVTVINNSVVEVELNENGASQHNQQKRLYFTIGSVESFERNLR 294
Query: 142 EKN--VDFAAR---PMEMNWGVSLLDFLANFGFPXXXXXXXXX--XXXXVNSPGGPNLPF 194
E D + P+ ++ FL NF P +S GG P
Sbjct: 295 EAQDKYDIPPQLRVPIHYTTKGNMARFLINF-LPTLLFLGAIYWMTKKAASSMGGMG-PM 352
Query: 195 GLGRSKAK-FEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLV 253
G G+S AK F E + + F DVAG+ EAKQ+ E V+FLQ PEK+ +GAKIP+G +L
Sbjct: 353 GFGKSTAKKFNQETDVKIKFKDVAGMAEAKQEVMEFVKFLQNPEKYEKLGAKIPRGAILS 412
Query: 254 GPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFID 313
GPPGTGKTLLAKA AGEAGVPF+S+SGSEF+EMFVGVGASRVRDLF A+ N+P +VF+D
Sbjct: 413 GPPGTGKTLLAKATAGEAGVPFYSVSGSEFVEMFVGVGASRVRDLFKTARENAPSIVFVD 472
Query: 314 EIDAVXXXXXXXXXX-XNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRP 372
EIDA+ NDERE TLNQLL EMDGF + V+V+A TNRP+ILD AL RP
Sbjct: 473 EIDAIGKQRSKGNATGANDERETTLNQLLVEMDGFDTSDHVVVLAGTNRPDILDRALMRP 532
Query: 373 GRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSV---IATRTPGFSGADLANLMNE 429
GRFDR V + P++ GR++I VH L KD+ + +A TPGFSGAD+AN+ NE
Sbjct: 533 GRFDRHVHIDNPELLGRKEIFDVHLQKITLQKDIDPDLSGRLAALTPGFSGADIANVCNE 592
Query: 430 AAILAGRRGKANITLKEIDDSIDRIVAGMEG-TKMTDGKNKILVAYHEIGHAVCATLTPG 488
AA++A R +TL+ + +I+R++ G+E +K+ + + + +VAYHE GHA+C
Sbjct: 593 AALIAARYNAEFVTLRHFELAIERVIGGVEKKSKLLNPEEQKIVAYHEAGHAICGWYLKY 652
Query: 489 HDPVQKVTLIPRGQ-ARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEIT 547
P+ KV++IPRGQ A G +LP D L+S QL+ R++ LGGR +EE+ F A +T
Sbjct: 653 AHPLLKVSIIPRGQGALGYAQYLPP-DQYLMSTLQLYDRMIMTLGGRVSEELHF--ASVT 709
Query: 548 TGAAGDLQQITQIARQMVTRYGMSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDI 606
+GA D +++T IA+ MV R+GMS+ +G D +S D + + S++ + I
Sbjct: 710 SGAHDDFKKVTGIAQSMVLRFGMSKTVGMVNYYD--TRSQDDLTK-----PFSDETSRII 762
Query: 607 DKTVRNIIESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVLSE 656
D V+ I+ Y+ K + + ++ + L++KE ++ ++ +L +
Sbjct: 763 DSEVQRIVSDCYQKCKQLLTEKSKEVELVAQELLKKEFITREDMIRLLGK 812
>POMBASE|SPBC543.09 [details] [associations]
symbol:yta12 "mitochondrial m-AAA protease Yta12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005745 "m-AAA complex" evidence=ISO] [GO:0006091 "generation
of precursor metabolites and energy" evidence=NAS] [GO:0006465
"signal peptide processing" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0008237 "metallopeptidase activity" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0033108 "mitochondrial respiratory chain complex
assembly" evidence=ISO] [GO:0045041 "protein import into
mitochondrial intermembrane space" evidence=ISO] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC543.09
GO:GO:0005524 GO:GO:0046872 EMBL:CU329671 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0004222 GO:GO:0006091
GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
KO:K08956 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 OMA:LYRFVTT
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0045041 GO:GO:0006465
GO:GO:0033108 RefSeq:NP_596797.1 ProteinModelPortal:Q9HGM3
SMR:Q9HGM3 STRING:Q9HGM3 MEROPS:M41.A14 EnsemblFungi:SPBC543.09.1
GeneID:2541079 KEGG:spo:SPBC543.09 NextBio:20802192 Uniprot:Q9HGM3
Length = 773
Score = 1035 (369.4 bits), Expect = 1.6e-104, P = 1.6e-104
Identities = 214/473 (45%), Positives = 309/473 (65%)
Query: 188 GGPNLPFGLGRSKAK-FEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKI 246
GG FG+G+S+AK F E + + F DVAGVDEAK++ E V+FL+ P+ + +GAKI
Sbjct: 269 GGQGGIFGIGKSRAKMFNHETDIKIKFADVAGVDEAKEEIMEFVKFLKNPKFYERLGAKI 328
Query: 247 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANS 306
P+G +L GPPGTGKTLLAKA AGEA VPF S+SGSEF+EMFVGVG SRVRDLF A+ N+
Sbjct: 329 PRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFLEMFVGVGPSRVRDLFATARKNA 388
Query: 307 PCLVFIDEIDAVXXXXXXXXXX-XNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEIL 365
PC++FIDEIDA+ NDERE TLNQLL EMDGFT + ++V A TNRP++L
Sbjct: 389 PCIIFIDEIDAIGKARGRGGQFGSNDERESTLNQLLVEMDGFTSSEHIVVFAGTNRPDVL 448
Query: 366 DSALHRPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSV--IATRTPGFSGADL 423
D AL RPGRFDRQ+++ PDI GREQI KVH + K ++ L +A T GF+GAD+
Sbjct: 449 DPALLRPGRFDRQITIDRPDIGGREQIFKVHLKHIKAADNIDLIAKRLAVLTSGFTGADI 508
Query: 424 ANLMNEAAILAGRRGKANITLKEIDDSIDRIVAGMEG-TKMTDGKNKILVAYHEIGHAVC 482
N+ NE A++A R + + + +I+R+ AG+E +++ + K VA+HE GHAV
Sbjct: 509 MNVCNEGALIAARSNSNEVQMVHFEQAIERVTAGLEKKSRVLSPEEKNTVAHHEAGHAVA 568
Query: 483 ATLTPGHDPVQKVTLIPRGQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFG 542
DP+ KV++IPR QA G +LP+ D L+S+ Q+ ++ L GR +EE+ FG
Sbjct: 569 GWFMEYVDPLLKVSIIPRAQALGYASYLPK-DQYLMSRGQILDQMGMALAGRVSEEIFFG 627
Query: 543 EAEITTGAAGDLQQITQIARQMVTRYGMSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEK 601
+IT+GA+ D Q++T++A+ VT+YGMS +G T+ P + + + V + SE
Sbjct: 628 PEKITSGASDDFQKVTRMAQAYVTQYGMSPTVG--TIAYP-IDTRETVQK-----PFSEA 679
Query: 602 LADDIDKTVRNIIESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVL 654
A ID+ +R +++ AYE K + +++ ++ + L++KE ++ +E +L
Sbjct: 680 TAQMIDEEIRKLVKHAYERTKKLLLEHKQGLENIAQRLLQKEVITYNEVETIL 732
>TAIR|locus:2066128 [details] [associations]
symbol:ftsh3 "FTSH protease 3" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 EMBL:AC005315 GO:GO:0030163 eggNOG:COG0465
HOGENOM:HOG000217277 KO:K08956 OMA:WDEKDFR TIGRFAMs:TIGR01241
HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0004176 EMBL:BT002743 EMBL:AY063914
EMBL:AK226271 IPI:IPI00525466 PIR:T02738 RefSeq:NP_850129.1
UniGene:At.24335 ProteinModelPortal:Q84WU8 SMR:Q84WU8
MEROPS:M41.022 PaxDb:Q84WU8 PRIDE:Q84WU8 EnsemblPlants:AT2G29080.1
GeneID:817456 KEGG:ath:AT2G29080 GeneFarm:2506 TAIR:At2g29080
InParanoid:Q84WU8 PhylomeDB:Q84WU8 ProtClustDB:CLSN2692039
Genevestigator:Q84WU8 Uniprot:Q84WU8
Length = 809
Score = 1006 (359.2 bits), Expect = 2.8e-103, Sum P(2) = 2.8e-103
Identities = 219/493 (44%), Positives = 300/493 (60%)
Query: 184 VNSPGGPNLP--FGLGRSK-AKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFA 240
V GG N F +G++ + + + F DVAG DEAKQ+ E V FL+ P+K+
Sbjct: 289 VGGTGGKNGRGIFNIGKATITRADKHSKNKIYFKDVAGCDEAKQEIMEFVHFLKNPKKYE 348
Query: 241 AVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFN 300
+GAKIPKG LLVGPPGTGKTLLAKA AGE+GVPF S+SGS+F+EMFVGVG SRVR LF
Sbjct: 349 DLGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRHLFQ 408
Query: 301 KAKANSPCLVFIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATN 360
+A+ +P ++FIDEIDA+ NDERE TLNQLL EMDGF +GV+V+A TN
Sbjct: 409 EARQAAPSIIFIDEIDAIGRARGRGGLGGNDERESTLNQLLVEMDGFGTTAGVVVLAGTN 468
Query: 361 RPEILDSALHRPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSL--SVIATRTPGF 418
RP+ILD AL RPGRFDRQ+++ PDI+GR+QI K++ KLD + S +A TPGF
Sbjct: 469 RPDILDKALLRPGRFDRQITIDKPDIKGRDQIFKIYLKKIKLDHEPSYYSQRLAALTPGF 528
Query: 419 SGADLANLMNEAAILAGRRGKANITLKEIDDSIDRIVAGMEGTKMTDGK-NKILVAYHEI 477
+GAD+AN+ NEAA++A R A +T+ + +IDR++ G+E K + VAYHE
Sbjct: 529 AGADIANVCNEAALIAARHEGATVTMAHFESAIDRVIGGLEKKNRVISKLERRTVAYHES 588
Query: 478 GHAVCATLTPGHDPVQKVTLIPRGQAR-GLTWFLPEEDPALISKQQLFARIVGGLGGRAA 536
GHAV +P+ KVT++PRG A G ++P E+ L++K+QLF LGGRAA
Sbjct: 589 GHAVVGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN-LLMTKEQLFDMTCMTLGGRAA 647
Query: 537 EEVIFGEAEITTGAAGDLQQITQIARQMVTRYGMSEIGPWTLIDPSVQSSDVVMRMLARN 596
E+V+ G+ I+TGA DL+++T++ V YG S+ P D
Sbjct: 648 EQVLIGK--ISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPPRDDGYDF------SK 699
Query: 597 SMSEKLADDIDKTVRNIIESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVLSE 656
S K ID+ VR+ + AYE + ++ + ++ ++L+EKE L D+ +L E
Sbjct: 700 PYSNKTGAIIDEEVRDWVAKAYERTVELVEEHKVKVAEIAELLLEKEVLHQDDLLKILGE 759
Query: 657 --FTDVSADQVDR 667
F DR
Sbjct: 760 RPFKSAEVTNYDR 772
Score = 37 (18.1 bits), Expect = 2.8e-103, Sum P(2) = 2.8e-103
Identities = 5/17 (29%), Positives = 10/17 (58%)
Query: 76 PIEYTSNRMTYSRFLQY 92
P+ Y S + Y F+++
Sbjct: 250 PVTYVSEMVWYQEFMRF 266
>MGI|MGI:1351651 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006515
"misfolded or incompletely synthesized protein catabolic process"
evidence=ISO] [GO:0007005 "mitochondrion organization"
evidence=ISO] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008283
"cell proliferation" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
MGI:MGI:1351651 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0004222 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
HOGENOM:HOG000217276 GeneTree:ENSGT00550000074836 KO:K08955
CTD:10730 HOVERGEN:HBG057127 OMA:HTSHVSA EMBL:AF090430
EMBL:AY136286 EMBL:AY136287 EMBL:AK079175 EMBL:BC007128
IPI:IPI00136555 RefSeq:NP_038799.1 UniGene:Mm.23335
ProteinModelPortal:O88967 SMR:O88967 STRING:O88967
PhosphoSite:O88967 PaxDb:O88967 PRIDE:O88967
Ensembl:ENSMUST00000028117 GeneID:27377 KEGG:mmu:27377
InParanoid:O88967 OrthoDB:EOG4KH2TK NextBio:305300 Bgee:O88967
CleanEx:MM_YME1L1 Genevestigator:O88967
GermOnline:ENSMUSG00000026775 Uniprot:O88967
Length = 715
Score = 1021 (364.5 bits), Expect = 4.7e-103, P = 4.7e-103
Identities = 216/446 (48%), Positives = 292/446 (65%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGE 270
VTF+ V GV+EAKQ+ QE+V+FL+ P+KF +G K+PKG+LLVGPPGTGKTLLA+A+AGE
Sbjct: 278 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 337
Query: 271 AGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXN 330
A VPF+ SGSEF EMFVGVGASR+R+LF +AKAN+PC++FIDE+D+V +
Sbjct: 338 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPM--H 395
Query: 331 DEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGRE 390
QT+NQLL EMDGF N GVI+I ATN PE LD+AL RPGRFD QV+V PD++GR
Sbjct: 396 PYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRT 455
Query: 391 QILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDS 450
+ILK + N K DK V +IA T GFSGA+L NL+N+AA+ A GK +T+KE++ S
Sbjct: 456 EILKWYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFS 515
Query: 451 IDRIVAGMEGTKMT-DGKNKILVAYHEIGHAVCATLTPGHDPVQKVTLIPRGQARGLTWF 509
D+I+ G E + D KNK + AYHE GHA+ A T P+ K T++PRG G
Sbjct: 516 KDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSL 575
Query: 510 LPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQITQIARQMVTRYG 569
LPE D ++ QL A++ +GGR AEE+IFG ITTGA+ D T+IA++MVT++G
Sbjct: 576 LPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFG 635
Query: 570 MSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIESAYEVAKNHIRNN 628
MSE +G T D +S + I++ +R ++ +YE AK+ ++ +
Sbjct: 636 MSEKLGVMTYSDTG--------------KLSPETQSAIEQEIRILLRESYERAKHILKTH 681
Query: 629 REAIDKLVDVLMEKETLSGDEFRAVL 654
+ L + L+ ETL E + VL
Sbjct: 682 AKEHKNLAEALLTYETLDAKEIQIVL 707
>UNIPROTKB|G3V886 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382 RGD:620764
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 KO:K08955 MEROPS:M41.A20 OMA:HTSHVSA
UniGene:Rn.8153 EMBL:CH474100 RefSeq:XP_003751780.1
Ensembl:ENSRNOT00000023395 GeneID:100910779 KEGG:rno:100910779
Uniprot:G3V886
Length = 715
Score = 1021 (364.5 bits), Expect = 4.7e-103, P = 4.7e-103
Identities = 216/446 (48%), Positives = 292/446 (65%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGE 270
VTF+ V GV+EAKQ+ QE+V+FL+ P+KF +G K+PKG+LLVGPPGTGKTLLA+A+AGE
Sbjct: 278 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 337
Query: 271 AGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXN 330
A VPF+ SGSEF EMFVGVGASR+R+LF +AKAN+PC++FIDE+D+V +
Sbjct: 338 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPM--H 395
Query: 331 DEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGRE 390
QT+NQLL EMDGF N GVI+I ATN PE LD+AL RPGRFD QV+V PD++GR
Sbjct: 396 PYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRT 455
Query: 391 QILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDS 450
+ILK + N K DK V +IA T GFSGA+L NL+N+AA+ A GK +T+KE++ S
Sbjct: 456 EILKWYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFS 515
Query: 451 IDRIVAGMEGTKMT-DGKNKILVAYHEIGHAVCATLTPGHDPVQKVTLIPRGQARGLTWF 509
D+I+ G E + D KNK + AYHE GHA+ A T P+ K T++PRG G
Sbjct: 516 KDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSL 575
Query: 510 LPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQITQIARQMVTRYG 569
LPE D ++ QL A++ +GGR AEE+IFG ITTGA+ D T+IA++MVT++G
Sbjct: 576 LPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFG 635
Query: 570 MSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIESAYEVAKNHIRNN 628
MSE +G T D +S + I++ +R ++ +YE AK+ ++ +
Sbjct: 636 MSEKLGVMTYSDTG--------------KLSPETQSAIEQEIRILLRESYERAKHILKTH 681
Query: 629 REAIDKLVDVLMEKETLSGDEFRAVL 654
+ L + L+ ETL E + VL
Sbjct: 682 AKEHKNLAEALLTYETLDAKEIQIVL 707
>UNIPROTKB|F1NTK8 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 EMBL:AADN02000548 IPI:IPI00601077
Ensembl:ENSGALT00000012112 Uniprot:F1NTK8
Length = 712
Score = 1019 (363.8 bits), Expect = 7.7e-103, P = 7.7e-103
Identities = 218/446 (48%), Positives = 290/446 (65%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGE 270
VTF+ V GV+EAKQ+ QE+V+FL+ P KF +G K+PKG+LLVGPPGTGKTLLA+A+AGE
Sbjct: 275 VTFEHVKGVEEAKQELQEVVEFLKNPHKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 334
Query: 271 AGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXN 330
A VPF+ SGSEF EMFVGVGASR+R LF +AKAN+PC++FIDE+D+V +
Sbjct: 335 ADVPFYYASGSEFDEMFVGVGASRIRSLFREAKANAPCVIFIDELDSVGGKRIESPM--H 392
Query: 331 DEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGRE 390
QT+NQLL EMDGF N GV++I ATN PE LD+AL RPGRFD QV+V PD+RGR
Sbjct: 393 PYSRQTINQLLAEMDGFKPNEGVVIIGATNFPEALDNALIRPGRFDMQVTVPKPDVRGRT 452
Query: 391 QILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDS 450
+ILK + N K D+ V +IA T GFSGA+L NL+N+AA+ A GK +T+KE++ S
Sbjct: 453 EILKWYLNKIKYDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKDMVTMKELEFS 512
Query: 451 IDRIVAGMEGTKMT-DGKNKILVAYHEIGHAVCATLTPGHDPVQKVTLIPRGQARGLTWF 509
D+I+ G E + D KNK + AYHE GHA+ A T P+ K T++ RG G
Sbjct: 513 KDKILMGPERRSVEIDEKNKTITAYHESGHAIIAYYTKDAMPINKATIMTRGTTLGHVSL 572
Query: 510 LPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQITQIARQMVTRYG 569
LPE D ++ QL A++ +GGRAAEE+IFG ITTGA+ D T+IA+ MVTR+G
Sbjct: 573 LPENDRWSETRSQLLAQMDVCMGGRAAEELIFGSDHITTGASSDFDNATKIAKLMVTRFG 632
Query: 570 MSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIESAYEVAKNHIRNN 628
MSE +G T D +S + I++ VR ++ +YE AKN ++ +
Sbjct: 633 MSEKLGVMTYTDTG--------------KVSPETQSAIEQEVRTLLRDSYERAKNILKTH 678
Query: 629 REAIDKLVDVLMEKETLSGDEFRAVL 654
+ L + L++ ETL E + VL
Sbjct: 679 AKEHKNLAEALLKYETLDAKEIQIVL 704
>UNIPROTKB|F1P519 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005743 GO:GO:0008283 GO:GO:0004222
GO:GO:0006515 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
GeneTree:ENSGT00550000074836 OMA:HTSHVSA EMBL:AADN02000548
IPI:IPI00822340 Ensembl:ENSGALT00000038444 Uniprot:F1P519
Length = 717
Score = 1019 (363.8 bits), Expect = 7.7e-103, P = 7.7e-103
Identities = 218/446 (48%), Positives = 290/446 (65%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGE 270
VTF+ V GV+EAKQ+ QE+V+FL+ P KF +G K+PKG+LLVGPPGTGKTLLA+A+AGE
Sbjct: 280 VTFEHVKGVEEAKQELQEVVEFLKNPHKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 339
Query: 271 AGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXN 330
A VPF+ SGSEF EMFVGVGASR+R LF +AKAN+PC++FIDE+D+V +
Sbjct: 340 ADVPFYYASGSEFDEMFVGVGASRIRSLFREAKANAPCVIFIDELDSVGGKRIESPM--H 397
Query: 331 DEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGRE 390
QT+NQLL EMDGF N GV++I ATN PE LD+AL RPGRFD QV+V PD+RGR
Sbjct: 398 PYSRQTINQLLAEMDGFKPNEGVVIIGATNFPEALDNALIRPGRFDMQVTVPKPDVRGRT 457
Query: 391 QILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDS 450
+ILK + N K D+ V +IA T GFSGA+L NL+N+AA+ A GK +T+KE++ S
Sbjct: 458 EILKWYLNKIKYDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKDMVTMKELEFS 517
Query: 451 IDRIVAGMEGTKMT-DGKNKILVAYHEIGHAVCATLTPGHDPVQKVTLIPRGQARGLTWF 509
D+I+ G E + D KNK + AYHE GHA+ A T P+ K T++ RG G
Sbjct: 518 KDKILMGPERRSVEIDEKNKTITAYHESGHAIIAYYTKDAMPINKATIMTRGTTLGHVSL 577
Query: 510 LPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQITQIARQMVTRYG 569
LPE D ++ QL A++ +GGRAAEE+IFG ITTGA+ D T+IA+ MVTR+G
Sbjct: 578 LPENDRWSETRSQLLAQMDVCMGGRAAEELIFGSDHITTGASSDFDNATKIAKLMVTRFG 637
Query: 570 MSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIESAYEVAKNHIRNN 628
MSE +G T D +S + I++ VR ++ +YE AKN ++ +
Sbjct: 638 MSEKLGVMTYTDTG--------------KVSPETQSAIEQEVRTLLRDSYERAKNILKTH 683
Query: 629 REAIDKLVDVLMEKETLSGDEFRAVL 654
+ L + L++ ETL E + VL
Sbjct: 684 AKEHKNLAEALLKYETLDAKEIQIVL 709
>DICTYBASE|DDB_G0272120 [details] [associations]
symbol:rcaA "peptidase M41, FtsH domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0272120 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GenomeReviews:CM000151_GR GO:GO:0004222
EMBL:AAFI02000008 GO:GO:0030163 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 ProtClustDB:CLSZ2846729 RefSeq:XP_645267.1
ProteinModelPortal:Q75JS8 SMR:Q75JS8 STRING:Q75JS8
EnsemblProtists:DDB0185211 GeneID:8618433 KEGG:ddi:DDB_G0272120
InParanoid:Q75JS8 OMA:ERTIVAH Uniprot:Q75JS8
Length = 844
Score = 1018 (363.4 bits), Expect = 9.8e-103, P = 9.8e-103
Identities = 215/464 (46%), Positives = 298/464 (64%)
Query: 196 LGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGP 255
L +SK+K +T TF DVAG+DEAK++ E V FL+ P ++ +GA+IPKG +L GP
Sbjct: 337 LFKSKSKAVKATST-TTFKDVAGMDEAKEEIMEFVSFLKDPSRYKKLGARIPKGAILSGP 395
Query: 256 PGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEI 315
PGTGKTLLAKA AGEAGV F+++SGS+FIEMFVGVG SRVRDLF +A+AN+PC+VFIDEI
Sbjct: 396 PGTGKTLLAKATAGEAGVNFYTISGSDFIEMFVGVGPSRVRDLFKEARANTPCIVFIDEI 455
Query: 316 DAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRF 375
DAV NDERE TLNQLL EMDGF+ SGV+V A TNR ++LD AL RPGRF
Sbjct: 456 DAVGRARSRGGFH-NDERENTLNQLLVEMDGFSSTSGVVVFAGTNRSDVLDPALLRPGRF 514
Query: 376 DRQVSVGLPDIRGREQILKVHSNNKKLDKDVS--LSVIATRTPGFSGADLANLMNEAAIL 433
DRQ+ VG PDI+GR+ I VH N KLD ++ +AT TPGFSGAD+AN+ NE A++
Sbjct: 515 DRQIYVGKPDIKGRKDIFMVHLKNIKLDGEMEEIAKKLATLTPGFSGADIANVCNEGALV 574
Query: 434 AGRRGKANITLKEIDDSIDRIVAGMEG-TKMTDGKNKILVAYHEIGHAVCATLTPGHDPV 492
A R+ + +++I+R++ G++ ++ + + +VA+HE GHAV DP+
Sbjct: 575 AARKDATSANFDHFEEAIERVLVGLKRENRVLSPEERTIVAHHEAGHAVVGWFLEHTDPL 634
Query: 493 QKVTLIPRGQAR-GLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAA 551
KV+++PRG G + P+ D L +++QLF RI LGGR AE +IF I+TGA
Sbjct: 635 LKVSIVPRGSGTLGFAQYQPK-DQYLYTREQLFDRICVSLGGRIAESIIFDR--ISTGAM 691
Query: 552 GDLQQITQIARQMVTRYGMSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTV 610
DL ++T++A V YGMSE +G + + D+ + S+ A ID+ +
Sbjct: 692 DDLDKVTKMASASVVNYGMSEKVGVASF---RKEGDDITVV----KPYSQATARMIDEEI 744
Query: 611 RNIIESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVL 654
R ++ AY + +E + KL +L+EKE + D+ R +L
Sbjct: 745 RRMVNDAYSKTTQLLHEKKELLIKLATILLEKEVIQRDDLRTIL 788
>UNIPROTKB|F1PRV6 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 OMA:HTSHVSA EMBL:AAEX03001169
Ensembl:ENSCAFT00000007090 Uniprot:F1PRV6
Length = 748
Score = 1017 (363.1 bits), Expect = 1.3e-102, P = 1.3e-102
Identities = 215/446 (48%), Positives = 292/446 (65%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGE 270
VTF+ V GV+EAKQ+ QE+V+FL+ P+KF +G K+PKG+LLVGPPGTGKTLLA+A+AGE
Sbjct: 312 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 371
Query: 271 AGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXN 330
A VPF+ SGSEF EMFVGVGASR+R+LF +AKAN+PC++FIDE+D+V +
Sbjct: 372 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPM--H 429
Query: 331 DEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGRE 390
QT+NQLL EMDGF N GVI+I ATN PE LD+AL RPGRFD QV+V PD++GR
Sbjct: 430 PYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRT 489
Query: 391 QILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDS 450
+ILK + N K D+ V +IA T GFSGA+L NL+N+AA+ A GK +T+KE++ S
Sbjct: 490 EILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFS 549
Query: 451 IDRIVAGMEGTKMT-DGKNKILVAYHEIGHAVCATLTPGHDPVQKVTLIPRGQARGLTWF 509
D+I+ G E + D KNK + AYHE GHA+ A T P+ K T++PRG G
Sbjct: 550 KDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSL 609
Query: 510 LPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQITQIARQMVTRYG 569
LPE D ++ QL A++ +GGR AEE+IFG ITTGA+ D T+IA++MVT++G
Sbjct: 610 LPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFG 669
Query: 570 MSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIESAYEVAKNHIRNN 628
MSE +G T D +S + I++ +R ++ +YE AK+ ++ +
Sbjct: 670 MSEKLGVMTYSDTG--------------KLSPETQSAIEQEIRILLRDSYERAKHILKTH 715
Query: 629 REAIDKLVDVLMEKETLSGDEFRAVL 654
+ L + L+ ETL E + VL
Sbjct: 716 AKEHKNLAEALLTYETLDAKEIQIVL 741
>UNIPROTKB|F1RVK1 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008283 "cell proliferation" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005743
GO:GO:0008283 GO:GO:0004222 GO:GO:0006515 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 GeneTree:ENSGT00550000074836
OMA:HTSHVSA EMBL:FP016148 Ensembl:ENSSSCT00000012110 Uniprot:F1RVK1
Length = 768
Score = 1017 (363.1 bits), Expect = 1.3e-102, P = 1.3e-102
Identities = 215/446 (48%), Positives = 292/446 (65%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGE 270
VTF+ V GV+EAKQ+ QE+V+FL+ P+KF +G K+PKG+LLVGPPGTGKTLLA+A+AGE
Sbjct: 331 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 390
Query: 271 AGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXN 330
A VPF+ SGSEF EMFVGVGASR+R+LF +AKAN+PC++FIDE+D+V +
Sbjct: 391 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPM--H 448
Query: 331 DEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGRE 390
QT+NQLL EMDGF N GVI+I ATN PE LD+AL RPGRFD QV+V PD++GR
Sbjct: 449 PYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRT 508
Query: 391 QILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDS 450
+ILK + N K D+ V +IA T GFSGA+L NL+N+AA+ A GK +T+KE++ S
Sbjct: 509 EILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFS 568
Query: 451 IDRIVAGMEGTKMT-DGKNKILVAYHEIGHAVCATLTPGHDPVQKVTLIPRGQARGLTWF 509
D+I+ G E + D KNK + AYHE GHA+ A T P+ K T++PRG G
Sbjct: 569 KDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSL 628
Query: 510 LPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQITQIARQMVTRYG 569
LPE D ++ QL A++ +GGR AEE+IFG ITTGA+ D T+IA++MVT++G
Sbjct: 629 LPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFG 688
Query: 570 MSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIESAYEVAKNHIRNN 628
MSE +G T D +S + I++ +R ++ +YE AK+ ++ +
Sbjct: 689 MSEKLGVMTYSDTG--------------KLSPETQSAIEQEIRILLRDSYERAKHILKTH 734
Query: 629 REAIDKLVDVLMEKETLSGDEFRAVL 654
+ L + L+ ETL E + VL
Sbjct: 735 AKEHKNLAEALLTYETLDAKEIQIVL 760
>UNIPROTKB|Q96TA2 [details] [associations]
symbol:YME1L1 "ATP-dependent zinc metalloprotease YME1L1"
species:9606 "Homo sapiens" [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0007005 "mitochondrion organization"
evidence=IMP] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IMP] [GO:0008283 "cell
proliferation" evidence=IMP] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005524 GO:GO:0016020 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0006508 GO:GO:0004222
EMBL:CH471072 EMBL:AL160291 GO:GO:0030163 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
EMBL:AL162272 HOGENOM:HOG000217276 UniGene:Hs.74647 KO:K08955
EMBL:AF151782 EMBL:AJ132637 EMBL:AY358484 EMBL:AK297973
EMBL:BC023507 EMBL:BC024032 IPI:IPI00045946 IPI:IPI00099529
RefSeq:NP_001240795.1 RefSeq:NP_055078.1 RefSeq:NP_647473.1
UniGene:Hs.499145 ProteinModelPortal:Q96TA2 SMR:Q96TA2
IntAct:Q96TA2 STRING:Q96TA2 MEROPS:M41.A20 PhosphoSite:Q96TA2
DMDM:46397258 PaxDb:Q96TA2 PRIDE:Q96TA2 Ensembl:ENST00000326799
Ensembl:ENST00000375972 Ensembl:ENST00000376016 GeneID:10730
KEGG:hsa:10730 UCSC:uc001iti.3 UCSC:uc001itj.3 CTD:10730
GeneCards:GC10M027439 H-InvDB:HIX0127242 HGNC:HGNC:12843 MIM:607472
neXtProt:NX_Q96TA2 PharmGKB:PA37434 HOVERGEN:HBG057127
InParanoid:Q96TA2 OMA:HTSHVSA PhylomeDB:Q96TA2 ChiTaRS:YME1L1
GenomeRNAi:10730 NextBio:40734 ArrayExpress:Q96TA2 Bgee:Q96TA2
CleanEx:HS_YME1L1 Genevestigator:Q96TA2 GermOnline:ENSG00000136758
Uniprot:Q96TA2
Length = 773
Score = 1016 (362.7 bits), Expect = 1.6e-102, P = 1.6e-102
Identities = 215/446 (48%), Positives = 292/446 (65%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGE 270
VTF+ V GV+EAKQ+ QE+V+FL+ P+KF +G K+PKG+LLVGPPGTGKTLLA+A+AGE
Sbjct: 336 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGE 395
Query: 271 AGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXN 330
A VPF+ SGSEF EMFVGVGASR+R+LF +AKAN+PC++FIDE+D+V +
Sbjct: 396 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPM--H 453
Query: 331 DEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGRE 390
QT+NQLL EMDGF N GVI+I ATN PE LD+AL RPGRFD QV+V PD++GR
Sbjct: 454 PYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRT 513
Query: 391 QILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDS 450
+ILK + N K D+ V +IA T GFSGA+L NL+N+AA+ A GK +T+KE++ S
Sbjct: 514 EILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFS 573
Query: 451 IDRIVAGMEGTKMT-DGKNKILVAYHEIGHAVCATLTPGHDPVQKVTLIPRGQARGLTWF 509
D+I+ G E + D KNK + AYHE GHA+ A T P+ K T++PRG G
Sbjct: 574 KDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSL 633
Query: 510 LPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQITQIARQMVTRYG 569
LPE D ++ QL A++ +GGR AEE+IFG ITTGA+ D T+IA++MVT++G
Sbjct: 634 LPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFG 693
Query: 570 MSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIESAYEVAKNHIRNN 628
MSE +G T D +S + I++ +R ++ +YE AK+ ++ +
Sbjct: 694 MSEKLGVMTYSDTG--------------KLSPETQSAIEQEIRILLRDSYERAKHILKTH 739
Query: 629 REAIDKLVDVLMEKETLSGDEFRAVL 654
+ L + L+ ETL E + VL
Sbjct: 740 AKEHKNLAEALLTYETLDAKEIQIVL 765
>SGD|S000000819 [details] [associations]
symbol:AFG3 "Component, with Yta12p, of the mitochondrial
inner membrane m-AAA pro" species:4932 "Saccharomyces cerevisiae"
[GO:0016887 "ATPase activity" evidence=ISS;IMP;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0031966 "mitochondrial
membrane" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA;IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA;IMP]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IDA] [GO:0001302 "replicative cell
aging" evidence=IMP] [GO:0002181 "cytoplasmic translation"
evidence=IMP] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006461 "protein complex assembly"
evidence=IMP] [GO:0006465 "signal peptide processing" evidence=IMP]
[GO:0005745 "m-AAA complex" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 SGD:S000000819
GO:GO:0005524 GO:GO:0006461 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0001302 GO:GO:0004222
GO:GO:0016887 EMBL:BK006939 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
TIGRFAMs:TIGR01241 OMA:LYRFVTT EMBL:X81066 EMBL:X76643 EMBL:U18778
PIR:S46611 RefSeq:NP_010933.1 ProteinModelPortal:P39925 SMR:P39925
DIP:DIP-802N IntAct:P39925 MINT:MINT-563722 STRING:P39925
MEROPS:M41.002 PaxDb:P39925 PeptideAtlas:P39925
EnsemblFungi:YER017C GeneID:856737 KEGG:sce:YER017C CYGD:YER017c
OrthoDB:EOG4J14HG NextBio:982861 Genevestigator:P39925
GermOnline:YER017C GO:GO:0005745 GO:GO:0097002 GO:GO:0002181
GO:GO:0045041 GO:GO:0006465 Uniprot:P39925
Length = 761
Score = 1016 (362.7 bits), Expect = 1.6e-102, P = 1.6e-102
Identities = 241/582 (41%), Positives = 345/582 (59%)
Query: 87 SRFLQYLDEGSVKKVDLFENGNVAIAEIFNQALDKIQRVKVQLPGLPQELLRKMKEKNVD 146
++FL + + K+V F G+V +IF + +D+IQ + + +P P++ + +
Sbjct: 170 NKFLVEAELVNTKQVVSFTIGSV---DIFEEQMDQIQDL-LNIP--PRDRIP------IK 217
Query: 147 FAARPMEMNWGVSLLDFLANFGFPXXXXXXXXXXXXXVNSPGGPNLP--FGLGRSKAK-F 203
+ R + L + G N GG L F +G+S+AK F
Sbjct: 218 YIERSSPFTFLFPFLPTIILLGGLYFITRKINSSPPNANGGGGGGLGGMFNVGKSRAKLF 277
Query: 204 EMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTLL 263
E + ++F +VAG DEAKQ+ E V FL+ P K+ +GAKIP+G +L GPPGTGKTLL
Sbjct: 278 NKETDIKISFKNVAGCDEAKQEIMEFVHFLKNPGKYTKLGAKIPRGAILSGPPGTGKTLL 337
Query: 264 AKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXX 323
AKA AGEA VPF S+SGSEF+EMFVGVGASRVRDLF +A++ +P ++FIDEIDA+
Sbjct: 338 AKATAGEANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMAPSIIFIDEIDAIGKERG 397
Query: 324 XXXXX--XNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSV 381
NDERE TLNQLL EMDGFT + V+V+A TNRP++LD+AL RPGRFDR + +
Sbjct: 398 KGGALGGANDEREATLNQLLVEMDGFTTSDQVVVLAGTNRPDVLDNALMRPGRFDRHIQI 457
Query: 382 GLPDIRGREQILKVHSNNKKLDK----DVS-LS-VIATRTPGFSGADLANLMNEAAILAG 435
PD+ GR+QI VH LD D++ LS +AT TPGF+GAD+AN NEAA++A
Sbjct: 458 DSPDVNGRQQIYLVHLKRLNLDPLLTDDMNNLSGKLATLTPGFTGADIANACNEAALIAA 517
Query: 436 RRGKANITLKEIDDSIDRIVAGMEG-TKMTDGKNKILVAYHEIGHAVCATLTPGHDPVQK 494
R IT+ + +I+R++AG+E T++ + K VAYHE GHAVC DP+ K
Sbjct: 518 RHNDPYITIHHFEQAIERVIAGLEKKTRVLSKEEKRSVAYHEAGHAVCGWFLKYADPLLK 577
Query: 495 VTLIPRGQ-ARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGD 553
V++IPRGQ A G +LP D LIS++Q R++ LGGR +EE+ F +T+GA D
Sbjct: 578 VSIIPRGQGALGYAQYLPP-DQYLISEEQFRHRMIMALGGRVSEELHF--PSVTSGAHDD 634
Query: 554 LQQITQIARQMVTRYGMS-EIGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRN 612
+++TQ+A MVT GMS +IG S +D ++ S K A ID V++
Sbjct: 635 FKKVTQMANAMVTSLGMSPKIGYL-----SFDQNDGNFKV--NKPFSNKTARTIDLEVKS 687
Query: 613 IIESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVL 654
I++ A+ + N + +D + L+ KE ++ ++ +L
Sbjct: 688 IVDDAHRACTELLTKNLDKVDLVAKELLRKEAITREDMIRLL 729
>WB|WBGene00004978 [details] [associations]
symbol:spg-7 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008340 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0008270 GO:GO:0006508
GO:GO:0000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0030968
EMBL:FO081580 HSSP:Q9LCZ4 RefSeq:NP_491165.2
ProteinModelPortal:Q9N3T5 SMR:Q9N3T5 STRING:Q9N3T5 MEROPS:M41.A10
PaxDb:Q9N3T5 EnsemblMetazoa:Y47G6A.10 GeneID:171915
KEGG:cel:CELE_Y47G6A.10 UCSC:Y47G6A.10 CTD:171915
WormBase:Y47G6A.10 InParanoid:Q9N3T5 NextBio:873225 Uniprot:Q9N3T5
Length = 782
Score = 1016 (362.7 bits), Expect = 1.6e-102, P = 1.6e-102
Identities = 224/461 (48%), Positives = 298/461 (64%)
Query: 195 GLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVG 254
G G+S A+ + V F DVAG +EAK + E V FL+ P+++ +GAKIPKG +L G
Sbjct: 274 GFGQSTARVINREDIKVKFADVAGCEEAKIEIMEFVNFLKNPQQYKDLGAKIPKGAILTG 333
Query: 255 PPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDE 314
PPGTGKTLLAKA AGEA VPF ++SGSEF+EMFVGVG +RVRD+F+ A+ NSPC++FIDE
Sbjct: 334 PPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDMFSMARKNSPCILFIDE 393
Query: 315 IDAVXXXXXXXXXXX-NDEREQTLNQLLTEMDGFTGN-SGVIVIAATNRPEILDSALHRP 372
IDAV + E+E TLNQLL EMDGFT + S VIVIAATNR +ILDSAL RP
Sbjct: 394 IDAVGRKRGGKGGMGGHSEQENTLNQLLVEMDGFTTDESSVIVIAATNRVDILDSALLRP 453
Query: 373 GRFDRQVSVGLPDIRGREQILKVHSN--NKKLDKDVSLSVIATRTPGFSGADLANLMNEA 430
GRFDRQ+ V +PDI+GR I +VH LDK V +A TPGFSGAD++N+ NEA
Sbjct: 454 GRFDRQIYVPVPDIKGRASIFRVHLGPLRTSLDKTVLSRKLAAHTPGFSGADISNVCNEA 513
Query: 431 AILAGRRGKANITLKEIDDSIDRIVAGMEG-TKMTDGKNKILVAYHEIGHAVCATLTPGH 489
A++A R I+ K + +I+R+VAGME T++ + K VAYHE GHA+
Sbjct: 514 ALIAARDANHEISNKHFEQAIERVVAGMEKKTQVLQKEEKKTVAYHEAGHAIAGWFLQHA 573
Query: 490 DPVQKVTLIPRGQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTG 549
DP+ KV++IPRG+ G +LP+E L SK QL R+ LGGR AEE+ FG ITTG
Sbjct: 574 DPLLKVSIIPRGKGLGYAQYLPKEQ-YLYSKDQLLDRMCMTLGGRVAEEIFFGR--ITTG 630
Query: 550 AAGDLQQITQIARQMVTRYGMSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDK 608
A DLQ++TQ+A V ++GMSE +GP + P+ M SE A ID+
Sbjct: 631 AQDDLQKVTQMAYSQVVKFGMSEKVGPLSFETPAPGE------MAFDKPYSEATAQLIDQ 684
Query: 609 TVRNIIESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDE 649
VR+++ +A ++ + R I+++ L+EKE L+ ++
Sbjct: 685 EVRDLVMNALRRTRDLLLEKRSDIERVALRLLEKEILNRED 725
>SGD|S000004695 [details] [associations]
symbol:YTA12 "Component of the mitochondrial inner membrane
m-AAA protease" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS;IDA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0006508 "proteolysis" evidence=IEA;IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;IDA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA;IMP] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006461 "protein complex assembly" evidence=IMP]
[GO:0006465 "signal peptide processing" evidence=IMP] [GO:0005745
"m-AAA complex" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 SGD:S000004695 EMBL:U09358 GO:GO:0005524
GO:GO:0006461 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0008237 GO:GO:0004222 GO:GO:0016887 EMBL:BK006946
GO:GO:0030163 EMBL:Z49259 eggNOG:COG0465
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0097002 GO:GO:0045041
GO:GO:0006465 EMBL:X81068 EMBL:AY693099 PIR:S54465
RefSeq:NP_013807.1 ProteinModelPortal:P40341 SMR:P40341
DIP:DIP-889N IntAct:P40341 MINT:MINT-596896 STRING:P40341
MEROPS:M41.003 PaxDb:P40341 PeptideAtlas:P40341
EnsemblFungi:YMR089C GeneID:855114 KEGG:sce:YMR089C CYGD:YMR089c
OMA:NFSGAND NextBio:978455 Genevestigator:P40341 GermOnline:YMR089C
Uniprot:P40341
Length = 825
Score = 1010 (360.6 bits), Expect = 6.9e-102, P = 6.9e-102
Identities = 217/470 (46%), Positives = 304/470 (64%)
Query: 194 FGLGRSKAK-FEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLL 252
FGL RSKAK F E + + F DVAG DEAK++ E V FL+ P ++ +GAKIP+G +L
Sbjct: 327 FGLSRSKAKKFNTETDVKIKFKDVAGCDEAKEEIMEFVSFLKEPSRYEKMGAKIPRGAIL 386
Query: 253 VGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFI 312
GPPGTGKTLLAKA AGEAGVPF+ +SGSEF+EMFVGVGA+RVRDLF A+ N+P +VFI
Sbjct: 387 SGPPGTGKTLLAKATAGEAGVPFYFVSGSEFVEMFVGVGAARVRDLFKTARENAPSIVFI 446
Query: 313 DEIDAVXXXXXXXXXX-XNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHR 371
DEIDA+ NDERE TLNQ+L EMDGFT V+V+A TNRP+ILD AL R
Sbjct: 447 DEIDAIGKARQKGNFSGANDERENTLNQMLVEMDGFTPADHVVVLAGTNRPDILDKALLR 506
Query: 372 PGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDV-SL-SVIATRTPGFSGADLANLMNE 429
PGRFDR +++ P++ GR+ I VH ++ KL ++ L + +A TPGFSGAD+AN+ NE
Sbjct: 507 PGRFDRHINIDKPELEGRKAIFAVHLHHLKLAGEIFDLKNRLAALTPGFSGADIANVCNE 566
Query: 430 AAILAGRRGKANITLKEIDDSIDRIVAGMEG-TKMTDGKNKILVAYHEIGHAVCATLTPG 488
AA++A R + + L + +I+R++ G+E +K+ + K +VAYHE GHAVC
Sbjct: 567 AALIAARSDEDAVKLNHFEQAIERVIGGVERKSKLLSPEEKKVVAYHEAGHAVCGWYLKY 626
Query: 489 HDPVQKVTLIPRGQ-ARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEIT 547
DP+ KV++IPRGQ A G +LP D L+++QQL R+ LGGR +EE+ F +T
Sbjct: 627 ADPLLKVSIIPRGQGALGYAQYLPG-DIFLLTEQQLKDRMTMSLGGRVSEELHF--PSVT 683
Query: 548 TGAAGDLQQITQIARQMVTRYGMSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDI 606
+GA+ D +++T +A MVT GMS+ IG W SD+ S++ D I
Sbjct: 684 SGASDDFKKVTSMATAMVTELGMSDKIG-WVNYQKR-DDSDLT------KPFSDETGDII 735
Query: 607 DKTVRNIIESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVLSE 656
D V I++ ++ ++ E ++K+ VL++KE L+ ++ +L +
Sbjct: 736 DSEVYRIVQECHDRCTKLLKEKAEDVEKIAQVLLKKEVLTREDMIDLLGK 785
>RGD|620764 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO;ISS] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO;ISS]
[GO:0007005 "mitochondrion organization" evidence=ISO;ISS]
[GO:0008283 "cell proliferation" evidence=ISO;ISS] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 RGD:620764 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0004222 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
HOGENOM:HOG000217276 MEROPS:M41.A20 HOVERGEN:HBG057127
OrthoDB:EOG4KH2TK EMBL:AF151784 IPI:IPI00206065 UniGene:Rn.8153
ProteinModelPortal:Q925S8 SMR:Q925S8 MINT:MINT-4611841
STRING:Q925S8 PRIDE:Q925S8 UCSC:RGD:620764 InParanoid:Q925S8
Genevestigator:Q925S8 GermOnline:ENSRNOG00000017100 Uniprot:Q925S8
Length = 715
Score = 1008 (359.9 bits), Expect = 1.1e-101, P = 1.1e-101
Identities = 215/446 (48%), Positives = 290/446 (65%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGE 270
VTF+ V GV+EAKQ+ QE+V+FL+ P+KF +G K+PKG+LLVGPPGTGKTLLA+A+AGE
Sbjct: 278 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 337
Query: 271 AGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXN 330
A VPF+ SGSEF EMFVGVGASR+R+LF +AKAN+PC++FIDE+D+V +
Sbjct: 338 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIEFPM--H 395
Query: 331 DEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGRE 390
QT+ QLL EMDGF N GVI+I ATN PE LD+AL RPGRFD QV+V PD++GR
Sbjct: 396 PYSRQTIIQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRT 455
Query: 391 QILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDS 450
+ILK + N K DK V +IA T GFSGA+L NL+N+AA+ A GK +T+KE++ S
Sbjct: 456 EILKWYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFS 515
Query: 451 IDRIVAGMEGTKMT-DGKNKILVAYHEIGHAVCATLTPGHDPVQKVTLIPRGQARGLTWF 509
D+I+ G E + D KNK + AYHE GHA+ A T P+ K T++PRG G
Sbjct: 516 KDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSL 575
Query: 510 LPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQITQIARQMVTRYG 569
LPE D + QL A++ +GGR AEE+IFG ITTGA+ D T+IA++MVT++G
Sbjct: 576 LPENDRWNEIRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFG 635
Query: 570 MSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIESAYEVAKNHIRNN 628
MSE +G T D +S + I++ +R ++ +YE AK+ ++ +
Sbjct: 636 MSEKLGVMTYSDTG--------------KLSPETQSAIEQEIRILLRESYERAKHILKTH 681
Query: 629 REAIDKLVDVLMEKETLSGDEFRAVL 654
+ L + L+ ETL E + VL
Sbjct: 682 AKEHKNLAEALLTYETLDAKEIQIVL 707
>GENEDB_PFALCIPARUM|PF14_0616 [details] [associations]
symbol:PF14_0616 "i-AAA protease, putative"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
EMBL:AE014187 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 HSSP:Q9LCZ4 RefSeq:XP_001348790.1
ProteinModelPortal:Q8IKI9 SMR:Q8IKI9 PRIDE:Q8IKI9
EnsemblProtists:PF14_0616:mRNA GeneID:812198 KEGG:pfa:PF14_0616
EuPathDB:PlasmoDB:PF3D7_1464900 OMA:HMENVET ProtClustDB:CLSZ2434669
Uniprot:Q8IKI9
Length = 706
Score = 987 (352.5 bits), Expect = 1.4e-101, Sum P(2) = 1.4e-101
Identities = 203/464 (43%), Positives = 290/464 (62%)
Query: 191 NLPFGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGV 250
N+ G+G S K N VTF DV G DE KQ+ +EI+ +L+ +KF +GAK+PKG+
Sbjct: 231 NVQKGIGVSNKKIIPVENVKVTFADVKGCDEVKQELEEIIDYLKNSDKFTKIGAKLPKGI 290
Query: 251 LLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLV 310
LL G PGTGKTL+A+AIAGEA VPF SGSEF EMFVGVGA R+R+LF AK ++PC+V
Sbjct: 291 LLSGEPGTGKTLIARAIAGEANVPFLQASGSEFEEMFVGVGARRIRELFQAAKKHAPCIV 350
Query: 311 FIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALH 370
FIDEIDAV N TLNQLL E+DGF N G++VI ATN P+ LD AL
Sbjct: 351 FIDEIDAVGSKRSSRD---NSAVRMTLNQLLVELDGFEQNEGIVVICATNFPQSLDKALV 407
Query: 371 RPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEA 430
RPGR D+ + V LPDI+GR +ILK++SN L KDV L V++ RT G +GADL N++N A
Sbjct: 408 RPGRLDKTIVVPLPDIKGRYEILKMYSNKIVLSKDVDLHVLSRRTVGMTGADLNNILNIA 467
Query: 431 AILAGRRGKANITLKEIDDSIDRIVAGMEGTKMTDGKNKILVAYHEIGHAVCATLTPGHD 490
AI GK ++ + I+ + DR+V G++ + + K + AYHE GH + T G D
Sbjct: 468 AIKCSVEGKKSVDMNSIEQAFDRVVVGLQRKSPLNEEEKNITAYHEGGHTLVNFYTKGSD 527
Query: 491 PVQKVTLIPRGQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGA 550
PV K T++PRG + G+TW +P D + + + I +GG +EE+IFG+ +TTG
Sbjct: 528 PVHKATIMPRGMSLGVTWKIPISDKYSQKIKDVQSEIDILMGGLVSEEIIFGKNNVTTGC 587
Query: 551 AGDLQQITQIARQMVTRYGMSEIGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTV 610
+ DLQ+ T IA+ +V YG +G + ++ M + + ++SE++ IDK++
Sbjct: 588 SSDLQKATHIAQSLVMNYG---VG--------INEDNISMFLHDKQNISEEMKIKIDKSI 636
Query: 611 RNIIESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVL 654
+ I+ +Y AKN + + + + ++ L+E ETL+ DE + +
Sbjct: 637 QRILLDSYNRAKNVLNQHIDELHRIASALVEYETLTSDEIKLAM 680
Score = 40 (19.1 bits), Expect = 1.4e-101, Sum P(2) = 1.4e-101
Identities = 13/53 (24%), Positives = 25/53 (47%)
Query: 93 LDEGSVKKVDLFENGNVAIAEIFNQALDKIQRVKVQLPGLPQELLRKMKEKNV 145
L+ ++ K+ N + + N+ LD+++R P +L+ KE NV
Sbjct: 19 LNINNLPKIACILNTRKGFSVLKNERLDRLKREVRNKPNDNFLILQFYKEANV 71
>UNIPROTKB|Q8IKI9 [details] [associations]
symbol:PF14_0616 "ATP-dependent protease la, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
EMBL:AE014187 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 HSSP:Q9LCZ4 RefSeq:XP_001348790.1
ProteinModelPortal:Q8IKI9 SMR:Q8IKI9 PRIDE:Q8IKI9
EnsemblProtists:PF14_0616:mRNA GeneID:812198 KEGG:pfa:PF14_0616
EuPathDB:PlasmoDB:PF3D7_1464900 OMA:HMENVET ProtClustDB:CLSZ2434669
Uniprot:Q8IKI9
Length = 706
Score = 987 (352.5 bits), Expect = 1.4e-101, Sum P(2) = 1.4e-101
Identities = 203/464 (43%), Positives = 290/464 (62%)
Query: 191 NLPFGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGV 250
N+ G+G S K N VTF DV G DE KQ+ +EI+ +L+ +KF +GAK+PKG+
Sbjct: 231 NVQKGIGVSNKKIIPVENVKVTFADVKGCDEVKQELEEIIDYLKNSDKFTKIGAKLPKGI 290
Query: 251 LLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLV 310
LL G PGTGKTL+A+AIAGEA VPF SGSEF EMFVGVGA R+R+LF AK ++PC+V
Sbjct: 291 LLSGEPGTGKTLIARAIAGEANVPFLQASGSEFEEMFVGVGARRIRELFQAAKKHAPCIV 350
Query: 311 FIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALH 370
FIDEIDAV N TLNQLL E+DGF N G++VI ATN P+ LD AL
Sbjct: 351 FIDEIDAVGSKRSSRD---NSAVRMTLNQLLVELDGFEQNEGIVVICATNFPQSLDKALV 407
Query: 371 RPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEA 430
RPGR D+ + V LPDI+GR +ILK++SN L KDV L V++ RT G +GADL N++N A
Sbjct: 408 RPGRLDKTIVVPLPDIKGRYEILKMYSNKIVLSKDVDLHVLSRRTVGMTGADLNNILNIA 467
Query: 431 AILAGRRGKANITLKEIDDSIDRIVAGMEGTKMTDGKNKILVAYHEIGHAVCATLTPGHD 490
AI GK ++ + I+ + DR+V G++ + + K + AYHE GH + T G D
Sbjct: 468 AIKCSVEGKKSVDMNSIEQAFDRVVVGLQRKSPLNEEEKNITAYHEGGHTLVNFYTKGSD 527
Query: 491 PVQKVTLIPRGQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGA 550
PV K T++PRG + G+TW +P D + + + I +GG +EE+IFG+ +TTG
Sbjct: 528 PVHKATIMPRGMSLGVTWKIPISDKYSQKIKDVQSEIDILMGGLVSEEIIFGKNNVTTGC 587
Query: 551 AGDLQQITQIARQMVTRYGMSEIGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTV 610
+ DLQ+ T IA+ +V YG +G + ++ M + + ++SE++ IDK++
Sbjct: 588 SSDLQKATHIAQSLVMNYG---VG--------INEDNISMFLHDKQNISEEMKIKIDKSI 636
Query: 611 RNIIESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVL 654
+ I+ +Y AKN + + + + ++ L+E ETL+ DE + +
Sbjct: 637 QRILLDSYNRAKNVLNQHIDELHRIASALVEYETLTSDEIKLAM 680
Score = 40 (19.1 bits), Expect = 1.4e-101, Sum P(2) = 1.4e-101
Identities = 13/53 (24%), Positives = 25/53 (47%)
Query: 93 LDEGSVKKVDLFENGNVAIAEIFNQALDKIQRVKVQLPGLPQELLRKMKEKNV 145
L+ ++ K+ N + + N+ LD+++R P +L+ KE NV
Sbjct: 19 LNINNLPKIACILNTRKGFSVLKNERLDRLKREVRNKPNDNFLILQFYKEANV 71
>UNIPROTKB|A6QR12 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008283 "cell proliferation" evidence=ISS] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005743
GO:GO:0008283 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005 HOGENOM:HOG000217276
GeneTree:ENSGT00550000074836 KO:K08955 MEROPS:M41.A20 CTD:10730
HOVERGEN:HBG057127 OMA:HTSHVSA OrthoDB:EOG4KH2TK EMBL:DAAA02035354
EMBL:BC150071 IPI:IPI00866889 RefSeq:NP_001095320.1 UniGene:Bt.1786
SMR:A6QR12 STRING:A6QR12 Ensembl:ENSBTAT00000021868 GeneID:505118
KEGG:bta:505118 InParanoid:A6QR12 NextBio:20866987 Uniprot:A6QR12
Length = 717
Score = 1007 (359.5 bits), Expect = 1.4e-101, P = 1.4e-101
Identities = 215/448 (47%), Positives = 292/448 (65%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGE 270
VTF+ V GV+EAKQ+ QE+V+FL+ P+KF +G K+PKG+LLVGPPGTGKTLLA+A+AGE
Sbjct: 278 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 337
Query: 271 AGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXN 330
A VPF+ SGSEF EMFVGVGASR+R+LF +AKAN+PC++FIDE+D+V +
Sbjct: 338 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPM--H 395
Query: 331 DEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGRE 390
QT+NQLL EMDGF N GVI+I ATN PE LD+AL RPGRFD QV+V PD++GR
Sbjct: 396 PYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRT 455
Query: 391 QILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDS 450
+ILK + N K D+ V +IA T GFSGA+L NL+N+AA+ A GK +T+KE++ S
Sbjct: 456 EILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFS 515
Query: 451 IDRIVAGMEGTKMT-DGKNKILVAYHEIGHAVCATLTPGHDPVQKVTLIPRGQARGLTWF 509
D+I+ G E + D KNK + AYHE GHA+ A T P+ K T++PRG G
Sbjct: 516 KDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSL 575
Query: 510 LPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTG--AAGDLQQITQIARQMVTR 567
LPE D ++ QL A++ +GGR AEE+IFG ITTG A+ D T+IA++MVT+
Sbjct: 576 LPENDRWNETRAQLLAQMDVSMGGRVAEELIFGSDHITTGYCASSDFDNATKIAKRMVTK 635
Query: 568 YGMSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIESAYEVAKNHIR 626
+GMSE +G T D +S + I++ +R ++ +YE AK+ ++
Sbjct: 636 FGMSEKLGVMTYSDTG--------------KLSPETQSAIEQEIRILLRDSYERAKHILK 681
Query: 627 NNREAIDKLVDVLMEKETLSGDEFRAVL 654
+ + L + L+ ETL E + VL
Sbjct: 682 THAKEHKNLAEALLTYETLDAKEIQIVL 709
>UNIPROTKB|J9NRR9 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0016020
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 GeneTree:ENSGT00550000074836 EMBL:AAEX03001169
Ensembl:ENSCAFT00000045217 Uniprot:J9NRR9
Length = 694
Score = 1006 (359.2 bits), Expect = 1.8e-101, P = 1.8e-101
Identities = 210/400 (52%), Positives = 275/400 (68%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGE 270
VTF+ V GV+EAKQ+ QE+V+FL+ P+KF +G K+PKG+LLVGPPGTGKTLLA+A+AGE
Sbjct: 278 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 337
Query: 271 AGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXN 330
A VPF+ SGSEF EMFVGVGASR+R+LF +AKAN+PC++FIDE+D+V +
Sbjct: 338 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPM--H 395
Query: 331 DEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGRE 390
QT+NQLL EMDGF N GVI+I ATN PE LD+AL RPGRFD QV+V PD++GR
Sbjct: 396 PYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRT 455
Query: 391 QILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDS 450
+ILK + N K D+ V +IA T GFSGA+L NL+N+AA+ A GK +T+KE++ S
Sbjct: 456 EILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFS 515
Query: 451 IDRIVAGMEGTKMT-DGKNKILVAYHEIGHAVCATLTPGHDPVQKVTLIPRGQARGLTWF 509
D+I+ G E + D KNK + AYHE GHA+ A T P+ K T++PRG G
Sbjct: 516 KDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSL 575
Query: 510 LPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQITQIARQMVTRYG 569
LPE D ++ QL A++ +GGR AEE+IFG ITTGA+ D T+IA++MVT++G
Sbjct: 576 LPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFG 635
Query: 570 MSE-IGPWTLID-----PSVQSS-DVVMRMLARNSMSEKL 602
MSE +G T D P QS+ + +R+L RN EKL
Sbjct: 636 MSEKLGVMTYSDTGKLSPETQSAIEQEIRILLRNDKMEKL 675
>TAIR|locus:2154568 [details] [associations]
symbol:ftsh9 "FTSH protease 9" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0009941 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 EMBL:AB016885
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798
ProtClustDB:CLSN2689036 EMBL:AY059856 IPI:IPI00541670
RefSeq:NP_568892.1 UniGene:At.7754 ProteinModelPortal:Q9FIM2
SMR:Q9FIM2 STRING:Q9FIM2 MEROPS:M41.A03 PaxDb:Q9FIM2 PRIDE:Q9FIM2
EnsemblPlants:AT5G58870.1 GeneID:836004 KEGG:ath:AT5G58870
GeneFarm:2516 TAIR:At5g58870 InParanoid:Q9FIM2 OMA:SSKRGEN
PhylomeDB:Q9FIM2 Genevestigator:Q9FIM2 Uniprot:Q9FIM2
Length = 806
Score = 999 (356.7 bits), Expect = 1.0e-100, P = 1.0e-100
Identities = 246/587 (41%), Positives = 349/587 (59%)
Query: 94 DEGSVKKVDLFENGNVAIAEIFNQALDKIQRVK--VQLPGLPQEL---LRKMKEKNVDFA 148
D+G++++ + + ++ ++E L + K V P+++ KM E NV+F
Sbjct: 206 DDGNLQESET-SSSSIKLSESSETMLRSVAPTKRVVYSTTRPRDIKTPYEKMLENNVEFG 264
Query: 149 ARPME----MNWGVSLLDFLANFG-----FPXXXXXXXXXXXXXVNSPGGPNLPFGLGRS 199
+ N G+ +L ++A FP S GGP G
Sbjct: 265 SPDKRSGGFFNSGLIVLFYIAVLAGLLHRFPVNFSQSTTGQLRTRKS-GGP------GGG 317
Query: 200 KAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTG 259
K + E +TF DVAGVDEAK++ +EIV+FL+ P+++ +GA+ P+GVLLVG PGTG
Sbjct: 318 KVSGDGET---ITFADVAGVDEAKEELEEIVEFLKNPDRYVRLGARPPRGVLLVGLPGTG 374
Query: 260 KTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVX 319
KTLLAKA+AGE+ VPF S S SEF+E++VG+GASRVRDLF +AK +P ++FIDEIDAV
Sbjct: 375 KTLLAKAVAGESDVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVA 434
Query: 320 XXXXXXXXX-XNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQ 378
NDEREQTLNQLLTEMDGF +S VIV+ ATNR ++LD AL RPGRFDR
Sbjct: 435 KSRDGKFRMVSNDEREQTLNQLLTEMDGFDSSSAVIVLGATNRADVLDPALRRPGRFDRV 494
Query: 379 VSVGLPDIRGREQILKVHSNNKKLD--KDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
V+V PD GRE ILKVH + K+L DV+L+ IA+ T GF+GADLANL+NEAA+LAGR
Sbjct: 495 VTVESPDKVGRESILKVHVSKKELPLGDDVNLASIASMTTGFTGADLANLVNEAALLAGR 554
Query: 437 RGKANITLKEIDDSIDRIVAGMEG-TKMTDGKNKILVAYHEIGHAVCAT----LTPGHDP 491
+ K + + +++R +AG+E T G K +VA HE GHAV T L G
Sbjct: 555 KSKMTVDKIDFIHAVERSIAGIEKKTARLKGSEKAVVARHEAGHAVVGTAVASLLSGQSR 614
Query: 492 VQKVTLIPR-GQARGLTWFLP-EEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTG 549
V+K++++PR G A G T+ P ED L+ +L R+V LGGRAAEEV++ I+TG
Sbjct: 615 VEKLSILPRSGGALGFTYIPPTHEDRYLLFIDELHGRLVTLLGGRAAEEVVYS-GRISTG 673
Query: 550 AAGDLQQITQIARQMVTRYGMSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDK 608
A D+++ T +A + V YG++E IGP ++ S D L D + +
Sbjct: 674 ALDDIRRATDMAYKAVAEYGLNEKIGPVSVATLSAGGIDDSGGSPWGRDQGH-LVDLVQR 732
Query: 609 TVRNIIESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVLS 655
V N+++SA +VA +R N + ++ L L ++E + G+E + L+
Sbjct: 733 EVTNLLQSALDVALTVVRANPDVLEGLGAQLEDEEKVEGEELQKWLN 779
>UNIPROTKB|E1BFQ0 [details] [associations]
symbol:E1BFQ0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042407 "cristae formation" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 OMA:WDEKDFR GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:DAAA02046282 IPI:IPI00707325 Ensembl:ENSBTAT00000056979
Uniprot:E1BFQ0
Length = 802
Score = 995 (355.3 bits), Expect = 2.7e-100, P = 2.7e-100
Identities = 212/460 (46%), Positives = 295/460 (64%)
Query: 194 FGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLV 253
FG+G + AK ++ + GV F DVAG +EAK + E V FL+ P+++ +GAKIPKG LL
Sbjct: 284 FGIGETIAKI-IKDDIGVRFADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGALLT 342
Query: 254 GPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFID 313
GPPGTGKTLLAKA AGEAGVPF +++GSEF+EMFVGVG +RVRD+F A+ N+PC++F+D
Sbjct: 343 GPPGTGKTLLAKATAGEAGVPFITVNGSEFLEMFVGVGPARVRDMFALARKNAPCILFVD 402
Query: 314 EIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPG 373
EIDA+ E+E TLNQLL EMDGF + V+V+A TNRP++LD AL RPG
Sbjct: 403 EIDAIGRKRGRGHFGGQSEQENTLNQLLVEMDGFNSTTNVVVLAGTNRPDVLDPALMRPG 462
Query: 374 RFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATR----TPGF--SGADLANLM 427
RFDRQ+ +G PDI+GR I +VH KLD+ +S +A + TPGF SGAD++N+
Sbjct: 463 RFDRQIYIGPPDIKGRSSIFRVHLRPLKLDESLSKDALARKLAALTPGFTGSGADISNVC 522
Query: 428 NEAAILAGRRGKANITLKEIDDSIDRIVAGMEG-TKMTDGKNKILVAYHEIGHAVCATLT 486
NEAA++A R ++ K + +I+R++ G+E T++ K+ VAYHE GHAV
Sbjct: 523 NEAALIAARHLNPSVGEKHFEQAIERVIGGLEKKTQVLQPGEKMTVAYHEAGHAVVGWFL 582
Query: 487 PGHDPVQKVTLIPRGQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEI 546
DP+ KV+++PRG+ G LP E L +++QLF R+ LGGR AE++ FG +
Sbjct: 583 EHADPLLKVSIVPRGKGLGYAQCLPREQ-YLYTREQLFDRMCAMLGGRVAEQLFFGR--V 639
Query: 547 TTGAAGDLQQITQIARQMVTRYGMSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADD 605
TTGA DL+++TQ A + ++GMSE +G + P + L SE A
Sbjct: 640 TTGAQDDLRKVTQSAYAQIVQFGMSEKLGQVSFDLPRPGEA------LVEKPFSEATAQL 693
Query: 606 IDKTVRNIIESAYEVAKNHIRNNREAIDKLVDVLMEKETL 645
ID+ VR +I SA+ + + RE +DK+ L+EKE L
Sbjct: 694 IDEEVRRLIGSAHARTLDLLTRCREQVDKVGRRLLEKEVL 733
>TAIR|locus:2025052 [details] [associations]
symbol:ftsh10 "FTSH protease 10" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009536
"plastid" evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
EMBL:AC022464 ProtClustDB:CLSN2692039 EMBL:AY064138 EMBL:AY124808
EMBL:AK230173 IPI:IPI00520253 PIR:H86209 RefSeq:NP_172231.2
UniGene:At.23339 ProteinModelPortal:Q8VZI8 SMR:Q8VZI8 STRING:Q8VZI8
MEROPS:M41.023 PaxDb:Q8VZI8 PRIDE:Q8VZI8 EnsemblPlants:AT1G07510.1
GeneID:837265 KEGG:ath:AT1G07510 GeneFarm:2535 GeneFarm:2675
TAIR:At1g07510 InParanoid:Q8VZI8 OMA:YSEDTAM PhylomeDB:Q8VZI8
Genevestigator:Q8VZI8 Uniprot:Q8VZI8
Length = 813
Score = 994 (355.0 bits), Expect = 3.4e-100, P = 3.4e-100
Identities = 219/482 (45%), Positives = 302/482 (62%)
Query: 184 VNSPGGP--NLPFGLGRSK-AKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFA 240
+ PGG F +G+++ + + + F DVAG +EAKQ+ E V FLQ P+K+
Sbjct: 294 LGGPGGKAGRGIFNIGKAQITRADKNSKNKIYFKDVAGCEEAKQEIMEFVHFLQNPKKYE 353
Query: 241 AVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFN 300
+GAKIPKG LLVGPPGTGKTLLAKA AGE+ VPF S+SGS+F+EMFVGVG SRVR+LF
Sbjct: 354 DLGAKIPKGALLVGPPGTGKTLLAKATAGESAVPFLSISGSDFMEMFVGVGPSRVRNLFQ 413
Query: 301 KAKANSPCLVFIDEIDAVXXXXXXXXXXX-NDEREQTLNQLLTEMDGFTGNSGVIVIAAT 359
+A+ +P ++FIDEIDA+ NDERE TLNQLL EMDGF +GV+V+A T
Sbjct: 414 EARQCAPSIIFIDEIDAIGRARGRGGFSGGNDERESTLNQLLVEMDGFGTTAGVVVLAGT 473
Query: 360 NRPEILDSALHRPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSL--SVIATRTPG 417
NRP+ILD AL RPGRFDRQ+++ PDI+GR+QI +++ KLD + S +A TPG
Sbjct: 474 NRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKIKLDHEPSYYSQRLAALTPG 533
Query: 418 FSGADLANLMNEAAILAGRRGKANITLKEIDDSIDRIVAGMEGTKMTDGK-NKILVAYHE 476
F+GAD+AN+ NEAA++A R A +T+ D +IDR++ G+E K + VAYHE
Sbjct: 534 FAGADIANVCNEAALIAARHEGATVTMAHFDSAIDRVIGGLEKKNRVISKLERRTVAYHE 593
Query: 477 IGHAVCATLTPGHDPVQKVTLIPRGQAR-GLTWFLPEEDPALISKQQLFARIVGGLGGRA 535
GHAV +P+ KVT++PRG A G ++P E+ L++K+QLF LGGRA
Sbjct: 594 SGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN-LLMTKEQLFDMTCMTLGGRA 652
Query: 536 AEEVIFGEAEITTGAAGDLQQITQIARQMVTRYGMSE-IGPWTLIDPSVQSSDVVMRMLA 594
AE+V+ G I+TGA DL+++T++ V YG S+ IG L P Q D +
Sbjct: 653 AEQVLIGR--ISTGAQNDLEKVTKMTYAQVAVYGFSDKIG--LLSFP--QREDEFSK--- 703
Query: 595 RNSMSEKLADDIDKTVRNIIESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVL 654
S + ID+ VR + AY+ I ++E + ++ ++L+EKE L D+ VL
Sbjct: 704 --PYSNRTGAMIDEEVREWVGKAYKRTVELIEEHKEQVAQIAELLLEKEVLHQDDLTKVL 761
Query: 655 SE 656
E
Sbjct: 762 GE 763
>ZFIN|ZDB-GENE-070410-25 [details] [associations]
symbol:yme1l1b "YME1-like 1b" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-070410-25 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 KO:K08955
MEROPS:M41.A20 HOVERGEN:HBG057127 EMBL:BC139529 IPI:IPI00614293
RefSeq:NP_001082983.1 UniGene:Dr.148676 ProteinModelPortal:A4QNU8
SMR:A4QNU8 STRING:A4QNU8 GeneID:557907 KEGG:dre:557907 CTD:557907
InParanoid:A4QNU8 NextBio:20882221 Uniprot:A4QNU8
Length = 722
Score = 994 (355.0 bits), Expect = 3.4e-100, P = 3.4e-100
Identities = 215/446 (48%), Positives = 287/446 (64%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGE 270
VTF+ V GV+EAK + QE+V+FL+ P+KF +G K+PKG+LLVGPPGTGKTLLA+A+AGE
Sbjct: 285 VTFEHVKGVEEAKNELQEVVEFLRNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 344
Query: 271 AGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXN 330
A VPF+ SGSEF EMFVGVGASR+R+LF +AK N+PC++FIDE+D+V +
Sbjct: 345 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKGNAPCVIFIDELDSVGGKRIESPM--H 402
Query: 331 DEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGRE 390
QT+NQLL EMDGF N GVI+I ATN PE LD+AL RPGRFD QV+V PD++GR
Sbjct: 403 PYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRT 462
Query: 391 QILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDS 450
+ILK + K+D V VIA T GFSGA+L NL+N+AA+ A GK +T+KE++ +
Sbjct: 463 EILKWYLKKIKVDSAVEAEVIARGTVGFSGAELENLVNQAALKAAVDGKDMVTMKELEFA 522
Query: 451 IDRIVAGMEGTKMT-DGKNKILVAYHEIGHAVCATLTPGHDPVQKVTLIPRGQARGLTWF 509
D+I+ G E D +NK + AYHE GHA+ A T P+ K T++PRG G
Sbjct: 523 KDKILMGPERRSAEIDKRNKEITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSM 582
Query: 510 LPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQITQIARQMVTRYG 569
LPE D ++ QL A++ +GGR AEE+IFG ITTGA+ D T+IA+ MVTR+G
Sbjct: 583 LPENDRWSETRAQLLAQMDVSMGGRVAEELIFGNENITTGASSDFDSATKIAKMMVTRFG 642
Query: 570 MSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIESAYEVAKNHIRNN 628
MSE +G T D L + S + A I+ VR ++ +YE AK +++
Sbjct: 643 MSEKLGVMTYSD------------LTKQSPETQAA--IEHEVRILLRDSYERAKALLKSR 688
Query: 629 REAIDKLVDVLMEKETLSGDEFRAVL 654
+ L + L+ ETL E + VL
Sbjct: 689 AKEHRNLAEALLRYETLDAKEIQLVL 714
>UNIPROTKB|Q9Y4W6 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9606 "Homo
sapiens" [GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0021675 "nerve
development" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0051082 "unfolded protein binding" evidence=TAS]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0008219 DrugBank:DB00171 GO:GO:0007528 GO:GO:0051082
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 eggNOG:COG0465
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 GO:GO:0021675 GO:GO:0060013 EMBL:Y18314 EMBL:BC065016
IPI:IPI00001091 RefSeq:NP_006787.2 UniGene:Hs.726355 PDB:2LNA
PDBsum:2LNA ProteinModelPortal:Q9Y4W6 SMR:Q9Y4W6 IntAct:Q9Y4W6
MINT:MINT-1161944 STRING:Q9Y4W6 MEROPS:M41.007 PhosphoSite:Q9Y4W6
DMDM:126302516 PaxDb:Q9Y4W6 PeptideAtlas:Q9Y4W6 PRIDE:Q9Y4W6
Ensembl:ENST00000269143 GeneID:10939 KEGG:hsa:10939 UCSC:uc002kqz.2
GeneCards:GC18M012328 H-InvDB:HIX0027367 HGNC:HGNC:315
HPA:HPA004479 HPA:HPA004480 MIM:604581 MIM:610246 MIM:614487
neXtProt:NX_Q9Y4W6 Orphanet:101109 PharmGKB:PA24612
InParanoid:Q9Y4W6 PhylomeDB:Q9Y4W6 GenomeRNAi:10939 NextBio:41551
ArrayExpress:Q9Y4W6 Bgee:Q9Y4W6 CleanEx:HS_AFG3L2
Genevestigator:Q9Y4W6 GermOnline:ENSG00000141385 Uniprot:Q9Y4W6
Length = 797
Score = 993 (354.6 bits), Expect = 4.4e-100, P = 4.4e-100
Identities = 216/467 (46%), Positives = 296/467 (63%)
Query: 194 FGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLV 253
F +G + AK ++ V F DVAG +EAK + E V FL+ P+++ +GAKIPKG +L
Sbjct: 289 FSVGETTAKV-LKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILT 347
Query: 254 GPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFID 313
GPPGTGKTLLAKA AGEA VPF ++SGSEF+EMFVGVG +RVRDLF A+ N+PC++FID
Sbjct: 348 GPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFID 407
Query: 314 EIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPG 373
EIDAV E+E TLNQLL EMDGF + V+++A TNRP+ILD AL RPG
Sbjct: 408 EIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPG 467
Query: 374 RFDRQVSVGLPDIRGREQILKVHSNNKKLD----KDVSLSVIATRTPGFSGADLANLMNE 429
RFDRQ+ +G PDI+GR I KVH KLD KD +A+ TPGFSGAD+AN+ NE
Sbjct: 468 RFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNE 527
Query: 430 AAILAGRRGKANITLKEIDDSIDRIVAGMEG-TKMTDGKNKILVAYHEIGHAVCATLTPG 488
AA++A R +I K + +I+R++ G+E T++ + K VAYHE GHAV
Sbjct: 528 AALIAARHLSDSINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEH 587
Query: 489 HDPVQKVTLIPRGQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITT 548
DP+ KV++IPRG+ G +LP+E L +K+QL R+ LGGR +EE+ FG ITT
Sbjct: 588 ADPLLKVSIIPRGKGLGYAQYLPKEQ-YLYTKEQLLDRMCMTLGGRVSEEIFFGR--ITT 644
Query: 549 GAAGDLQQITQIARQMVTRYGMSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDID 607
GA DL+++TQ A + ++GM+E +G + P + D+V+ SE A ID
Sbjct: 645 GAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLP--RQGDMVLE----KPYSEATARLID 698
Query: 608 KTVRNIIESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVL 654
VR +I AY+ + + ++K+ +L+EKE L ++ +L
Sbjct: 699 DEVRILINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKNDMVELL 745
>UNIPROTKB|F1LN92 [details] [associations]
symbol:Afg3l2 "Protein Afg3l2" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016265 "death" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0021675 "nerve development" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1305259
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
IPI:IPI00192903 RefSeq:NP_001128336.1 UniGene:Rn.8386
ProteinModelPortal:F1LN92 PRIDE:F1LN92 Ensembl:ENSRNOT00000024632
GeneID:307350 KEGG:rno:307350 NextBio:657254 ArrayExpress:F1LN92
Uniprot:F1LN92
Length = 802
Score = 993 (354.6 bits), Expect = 4.4e-100, P = 4.4e-100
Identities = 219/476 (46%), Positives = 299/476 (62%)
Query: 194 FGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLV 253
F +G + AK ++ V F DVAG +EAK + E V FL+ P+++ +GAKIPKG +L
Sbjct: 288 FSVGETTAKV-LKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILT 346
Query: 254 GPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFID 313
GPPGTGKTLLAKA AGEA VPF ++SGSEF+EMFVGVG +RVRDLF A+ N+PC++FID
Sbjct: 347 GPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFID 406
Query: 314 EIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPG 373
EIDAV E+E TLNQLL EMDGF + V+++A TNRP+ILD AL RPG
Sbjct: 407 EIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPG 466
Query: 374 RFDRQVSVGLPDIRGREQILKVHSNNKKLD----KDVSLSVIATRTPGFSGADLANLMNE 429
RFDRQ+ +G PDI+GR I KVH KLD KD +A+ TPGFSGAD+AN+ NE
Sbjct: 467 RFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNE 526
Query: 430 AAILAGRRGKANITLKEIDDSIDRIVAGMEG-TKMTDGKNKILVAYHEIGHAVCATLTPG 488
AA++A R I K + +I+R++ G+E T++ + K VAYHE GHAV
Sbjct: 527 AALIAARHLSDAINEKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEH 586
Query: 489 HDPVQKVTLIPRGQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITT 548
DP+ KV++IPRG+ G +LP+E L +K+QL R+ LGGR +EE+ FG ITT
Sbjct: 587 ADPLLKVSIIPRGKGLGYAQYLPKEQ-YLYTKEQLLDRMCMTLGGRVSEEIFFGR--ITT 643
Query: 549 GAAGDLQQITQIARQMVTRYGMSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDID 607
GA DL+++TQ A + ++GM+E +G + P + D+V+ SE A ID
Sbjct: 644 GAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLP--RQGDMVLE----KPYSEATARMID 697
Query: 608 KTVRNIIESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVLSE--FTDVS 661
VR +I AY+ + + ++K+ +L+EKE L ++ +L FT+ S
Sbjct: 698 DEVRILISEAYKRTVALLTEKKADVEKVALLLLEKEVLDKNDMVELLGPRPFTEKS 753
>MGI|MGI:1916847 [details] [associations]
symbol:Afg3l2 "AFG3(ATPase family gene 3)-like 2 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IGI] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0008053 "mitochondrial fusion"
evidence=IGI] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016265 "death" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0021675 "nerve development" evidence=IMP]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IGI] [GO:0040014
"regulation of multicellular organism growth" evidence=IMP]
[GO:0042407 "cristae formation" evidence=IGI] [GO:0042552
"myelination" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048747 "muscle fiber development" evidence=IMP]
[GO:0060013 "righting reflex" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1916847
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
MEROPS:M41.007 EMBL:BC036999 EMBL:BC043056 IPI:IPI00170357
RefSeq:NP_081406.1 UniGene:Mm.426052 ProteinModelPortal:Q8JZQ2
SMR:Q8JZQ2 IntAct:Q8JZQ2 STRING:Q8JZQ2 PhosphoSite:Q8JZQ2
PaxDb:Q8JZQ2 PRIDE:Q8JZQ2 Ensembl:ENSMUST00000025408 GeneID:69597
KEGG:mmu:69597 UCSC:uc008fmf.1 InParanoid:Q8JZQ2 NextBio:329880
Bgee:Q8JZQ2 CleanEx:MM_AFG3L2 Genevestigator:Q8JZQ2
GermOnline:ENSMUSG00000024527 Uniprot:Q8JZQ2
Length = 802
Score = 992 (354.3 bits), Expect = 5.6e-100, P = 5.6e-100
Identities = 219/476 (46%), Positives = 298/476 (62%)
Query: 194 FGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLV 253
F +G + AK ++ V F DVAG +EAK + E V FL+ P+++ +GAKIPKG +L
Sbjct: 288 FSVGETTAKV-LKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILT 346
Query: 254 GPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFID 313
GPPGTGKTLLAKA AGEA VPF ++SGSEF+EMFVGVG +RVRDLF A+ N+PC++FID
Sbjct: 347 GPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFID 406
Query: 314 EIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPG 373
EIDAV E+E TLNQLL EMDGF + V+++A TNRP+ILD AL RPG
Sbjct: 407 EIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPG 466
Query: 374 RFDRQVSVGLPDIRGREQILKVHSNNKKLD----KDVSLSVIATRTPGFSGADLANLMNE 429
RFDRQ+ +G PDI+GR I KVH KLD KD +A+ TPGFSGAD+AN+ NE
Sbjct: 467 RFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNE 526
Query: 430 AAILAGRRGKANITLKEIDDSIDRIVAGMEG-TKMTDGKNKILVAYHEIGHAVCATLTPG 488
AA++A R I K + +I+R++ G+E T++ + K VAYHE GHAV
Sbjct: 527 AALIAARHLSDAINEKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEH 586
Query: 489 HDPVQKVTLIPRGQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITT 548
DP+ KV++IPRG+ G +LP+E L +K+QL R+ LGGR +EE+ FG ITT
Sbjct: 587 ADPLLKVSIIPRGKGLGYAQYLPKEQ-YLYTKEQLLDRMCMTLGGRVSEEIFFGR--ITT 643
Query: 549 GAAGDLQQITQIARQMVTRYGMSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDID 607
GA DL+++TQ A + ++GM+E +G + P + D+V+ SE A ID
Sbjct: 644 GAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLP--RQGDMVLE----KPYSEATARMID 697
Query: 608 KTVRNIIESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVLSE--FTDVS 661
VR +I AY + + ++K+ +L+EKE L ++ +L FT+ S
Sbjct: 698 DEVRILISDAYRRTVALLTEKKADVEKVALLLLEKEVLDKNDMVQLLGPRPFTEKS 753
>ZFIN|ZDB-GENE-070912-46 [details] [associations]
symbol:afg3l2 "AFG3 ATPase family gene 3-like 2 (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070912-46 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:10939 MEROPS:M41.007 EMBL:BX000484 EMBL:BC155655
IPI:IPI00513225 RefSeq:NP_001104667.1 UniGene:Dr.82691 SMR:A9JRG9
STRING:A9JRG9 Ensembl:ENSDART00000089834 GeneID:569168
KEGG:dre:569168 NextBio:20889547 Uniprot:A9JRG9
Length = 800
Score = 992 (354.3 bits), Expect = 5.6e-100, P = 5.6e-100
Identities = 218/477 (45%), Positives = 299/477 (62%)
Query: 187 PG-GPNLPFGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAK 245
PG G F + + AK + V F DVAG +EAK + E V FL+ P+++ +GAK
Sbjct: 276 PGRGMGGLFSVSETTAKV-LRDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAK 334
Query: 246 IPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKAN 305
IPKG +L GPPGTGKTLLAKA AGEA VPF +++GSEF+EMFVGVG +RVRDLF A+ N
Sbjct: 335 IPKGAILTGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFVLARKN 394
Query: 306 SPCLVFIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEIL 365
+PC++FIDEIDAV E+E TLNQLL EMDGF + V+V+A TNRP+IL
Sbjct: 395 APCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTATNVVVLAGTNRPDIL 454
Query: 366 DSALHRPGRFDRQVSVGLPDIRGREQILKVHSNNKKL----DKDVSLSVIATRTPGFSGA 421
D AL RPGRFDRQ+ +G PDI+GR I KVH KL DK+ +A TPGFSGA
Sbjct: 455 DPALMRPGRFDRQIYIGPPDIKGRASIFKVHLRPLKLEAELDKEALARKMAALTPGFSGA 514
Query: 422 DLANLMNEAAILAGRRGKANITLKEIDDSIDRIVAGMEG-TKMTDGKNKILVAYHEIGHA 480
D+AN+ NEAA++A R I K + +I+R++ G+E T++ + K VAYHE GHA
Sbjct: 515 DIANVCNEAALIAARHLSDAINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHA 574
Query: 481 VCATLTPGHDPVQKVTLIPRGQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVI 540
V DP+ KV++IPRG+ G +LP+E L +K+QL R+ LGGR +EE+
Sbjct: 575 VAGWFLEHADPLLKVSIIPRGKGLGYAQYLPKEQ-YLYTKEQLLDRMCMTLGGRVSEEIF 633
Query: 541 FGEAEITTGAAGDLQQITQIARQMVTRYGMSE-IGPWTLIDPSVQSSDVVMRMLARNSMS 599
FG ITTGA DL+++TQ A + ++GM+E +G + P + ++V+ S
Sbjct: 634 FGR--ITTGAQDDLKKVTQSAYAQIVQFGMNEKVGQVSFDLP--RQGELVLE----KPYS 685
Query: 600 EKLADDIDKTVRNIIESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVLSE 656
E A ID VRN+I +AYE + + + + ++K+ L+EKE L ++ +L +
Sbjct: 686 EATARLIDTEVRNLISTAYERTQQLLSDKKPEVEKVALRLLEKEVLDKNDMVELLGK 742
>UNIPROTKB|E1BZ74 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0016265 "death" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0042407 "cristae formation" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0060013 "righting
reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0008270 GO:GO:0006508
GO:GO:0040014 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 GO:GO:0016265
GO:GO:0060013 EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00603273 Ensembl:ENSGALT00000022474 ArrayExpress:E1BZ74
Uniprot:E1BZ74
Length = 805
Score = 990 (353.6 bits), Expect = 9.1e-100, P = 9.1e-100
Identities = 213/458 (46%), Positives = 293/458 (63%)
Query: 194 FGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLV 253
F +G + AK ++ V F DVAG +EAK + E V FL+ P+++ +GAKIPKG +L
Sbjct: 289 FSVGETTAKV-LKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYEDLGAKIPKGAILT 347
Query: 254 GPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFID 313
GPPGTGKTLLAKA AGEA VPF +++GSEF+EMFVGVG +RVRDLF A+ N+PC++FID
Sbjct: 348 GPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFALARKNAPCILFID 407
Query: 314 EIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPG 373
EIDAV E+E TLNQLL EMDGF + V+++A TNRP+ILD AL RPG
Sbjct: 408 EIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPG 467
Query: 374 RFDRQVSVGLPDIRGREQILKVHSNNKKLD----KDVSLSVIATRTPGFSGADLANLMNE 429
RFDRQ+ +G PDI+GR I KVH KLD KD +A+ TPGFSGAD+AN+ NE
Sbjct: 468 RFDRQIYIGPPDIKGRASIFKVHLRPLKLDTVLDKDNLARKLASLTPGFSGADIANVCNE 527
Query: 430 AAILAGRRGKANITLKEIDDSIDRIVAGMEG-TKMTDGKNKILVAYHEIGHAVCATLTPG 488
AA++A R I K + +I+R++ G+E T++ + K VAYHE GHAV
Sbjct: 528 AALIAARHLSDAINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWFLEH 587
Query: 489 HDPVQKVTLIPRGQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITT 548
DP+ KV++IPRG+ G +LP+E L +K+QL R+ LGGR +E++ FG ITT
Sbjct: 588 ADPLLKVSIIPRGKGLGYAQYLPKEQ-YLYTKEQLLDRMCMTLGGRVSEQIFFGR--ITT 644
Query: 549 GAAGDLQQITQIARQMVTRYGMSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDID 607
GA DL+++TQ A + ++GM+E +G + P + D+V+ SE A ID
Sbjct: 645 GAQDDLKKVTQSAYAQIVQFGMNEKVGQISFDLP--RQGDMVLE----KPYSEATARMID 698
Query: 608 KTVRNIIESAYEVAKNHIRNNREAIDKLVDVLMEKETL 645
+ VR++I AY+ + + + ++K+ L+EKE L
Sbjct: 699 EEVRSLINIAYDRTLSLLTEKKAEVEKVALRLLEKEVL 736
>UNIPROTKB|F1N9N5 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
OMA:LYRFVTT EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00683486 Ensembl:ENSGALT00000016639 ArrayExpress:F1N9N5
Uniprot:F1N9N5
Length = 635
Score = 990 (353.6 bits), Expect = 9.1e-100, P = 9.1e-100
Identities = 213/458 (46%), Positives = 293/458 (63%)
Query: 194 FGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLV 253
F +G + AK ++ V F DVAG +EAK + E V FL+ P+++ +GAKIPKG +L
Sbjct: 133 FSVGETTAKV-LKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYEDLGAKIPKGAILT 191
Query: 254 GPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFID 313
GPPGTGKTLLAKA AGEA VPF +++GSEF+EMFVGVG +RVRDLF A+ N+PC++FID
Sbjct: 192 GPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFALARKNAPCILFID 251
Query: 314 EIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPG 373
EIDAV E+E TLNQLL EMDGF + V+++A TNRP+ILD AL RPG
Sbjct: 252 EIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPG 311
Query: 374 RFDRQVSVGLPDIRGREQILKVHSNNKKLD----KDVSLSVIATRTPGFSGADLANLMNE 429
RFDRQ+ +G PDI+GR I KVH KLD KD +A+ TPGFSGAD+AN+ NE
Sbjct: 312 RFDRQIYIGPPDIKGRASIFKVHLRPLKLDTVLDKDNLARKLASLTPGFSGADIANVCNE 371
Query: 430 AAILAGRRGKANITLKEIDDSIDRIVAGMEG-TKMTDGKNKILVAYHEIGHAVCATLTPG 488
AA++A R I K + +I+R++ G+E T++ + K VAYHE GHAV
Sbjct: 372 AALIAARHLSDAINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWFLEH 431
Query: 489 HDPVQKVTLIPRGQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITT 548
DP+ KV++IPRG+ G +LP+E L +K+QL R+ LGGR +E++ FG ITT
Sbjct: 432 ADPLLKVSIIPRGKGLGYAQYLPKEQ-YLYTKEQLLDRMCMTLGGRVSEQIFFGR--ITT 488
Query: 549 GAAGDLQQITQIARQMVTRYGMSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDID 607
GA DL+++TQ A + ++GM+E +G + P + D+V+ SE A ID
Sbjct: 489 GAQDDLKKVTQSAYAQIVQFGMNEKVGQISFDLP--RQGDMVLE----KPYSEATARMID 542
Query: 608 KTVRNIIESAYEVAKNHIRNNREAIDKLVDVLMEKETL 645
+ VR++I AY+ + + + ++K+ L+EKE L
Sbjct: 543 EEVRSLINIAYDRTLSLLTEKKAEVEKVALRLLEKEVL 580
>UNIPROTKB|E2QYF3 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060013 "righting reflex" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0042407 "cristae
formation" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
EMBL:AAEX03005521 RefSeq:XP_547682.2 ProteinModelPortal:E2QYF3
Ensembl:ENSCAFT00000029872 GeneID:490560 KEGG:cfa:490560
Uniprot:E2QYF3
Length = 806
Score = 990 (353.6 bits), Expect = 9.1e-100, P = 9.1e-100
Identities = 215/467 (46%), Positives = 296/467 (63%)
Query: 194 FGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLV 253
F +G + AK ++ V F DVAG +EAK + E V FL+ P+++ +GAKIPKG +L
Sbjct: 290 FSVGETTAKV-LKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILT 348
Query: 254 GPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFID 313
GPPGTGKTLLAKA AGEA VPF ++SGSEF+EMFVGVG +RVRDLF A+ N+PC++FID
Sbjct: 349 GPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFID 408
Query: 314 EIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPG 373
EIDAV E+E TLNQLL EMDGF + V+++A TNRP+ILD AL RPG
Sbjct: 409 EIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPG 468
Query: 374 RFDRQVSVGLPDIRGREQILKVHSNNKKLD----KDVSLSVIATRTPGFSGADLANLMNE 429
RFDRQ+ +G PDI+GR I KVH KLD K+ +A+ TPGFSGAD+AN+ NE
Sbjct: 469 RFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKEKLARKLASLTPGFSGADVANVCNE 528
Query: 430 AAILAGRRGKANITLKEIDDSIDRIVAGMEG-TKMTDGKNKILVAYHEIGHAVCATLTPG 488
AA++A R +I K + +I+R++ G+E T++ + K VAYHE GHAV
Sbjct: 529 AALIAARHLSDSINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEH 588
Query: 489 HDPVQKVTLIPRGQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITT 548
DP+ KV++IPRG+ G +LP+E L +K+QL R+ LGGR +EE+ FG ITT
Sbjct: 589 ADPLLKVSIIPRGKGLGYAQYLPKEQ-YLYTKEQLLDRMCMTLGGRVSEEIFFGR--ITT 645
Query: 549 GAAGDLQQITQIARQMVTRYGMSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDID 607
GA DL+++TQ A + ++GM+E +G + P + D+V+ SE A ID
Sbjct: 646 GAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLP--RQGDMVLE----KPYSEATARLID 699
Query: 608 KTVRNIIESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVL 654
VR +I AY+ + + ++K+ +L+EKE L ++ +L
Sbjct: 700 DEVRILINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKNDMVELL 746
>MGI|MGI:1928277 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=ISA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IGI] [GO:0008053 "mitochondrial fusion" evidence=IGI]
[GO:0008152 "metabolic process" evidence=ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IGI] [GO:0042407 "cristae formation" evidence=IGI]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1928277
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0031966
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 EMBL:AK012394 EMBL:AK159647 EMBL:AK167964
EMBL:AK168244 EMBL:BC056978 EMBL:AF329695 IPI:IPI00468514
IPI:IPI00652659 RefSeq:NP_473411.2 UniGene:Mm.287475
ProteinModelPortal:Q920A7 SMR:Q920A7 IntAct:Q920A7 STRING:Q920A7
MEROPS:M41.016 PhosphoSite:Q920A7 PaxDb:Q920A7 PRIDE:Q920A7
Ensembl:ENSMUST00000001520 Ensembl:ENSMUST00000098320 GeneID:114896
KEGG:mmu:114896 UCSC:uc009nwd.2 CTD:114896 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 InParanoid:Q920A7 KO:K08956 OMA:WDEKDFR
OrthoDB:EOG4SBDXC NextBio:368917 Bgee:Q920A7 CleanEx:MM_AFG3L1
Genevestigator:Q920A7 GermOnline:ENSMUSG00000031967 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
Uniprot:Q920A7
Length = 789
Score = 989 (353.2 bits), Expect = 1.2e-99, P = 1.2e-99
Identities = 211/458 (46%), Positives = 293/458 (63%)
Query: 194 FGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLV 253
F +G + AK ++ N V F DVAG +EAK + E V FL+ P+++ +GAKIPKG +L
Sbjct: 281 FSVGETTAKI-LKNNIDVRFADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAMLT 339
Query: 254 GPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFID 313
GPPGTGKTLLAKA AGEA VPF +++GSEF+EMFVGVG +RVRD+F A+ ++PC++FID
Sbjct: 340 GPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFID 399
Query: 314 EIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPG 373
EIDA+ E+E TLNQ+L EMDGF ++ V+V+A TNRP+ILD AL RPG
Sbjct: 400 EIDAIGRKRGRGHLGGQSEQENTLNQMLVEMDGFNSSTNVVVLAGTNRPDILDPALTRPG 459
Query: 374 RFDRQVSVGLPDIRGREQILKVHSNNKKLD----KDVSLSVIATRTPGFSGADLANLMNE 429
RFDRQ+ +G PDI+GR I KVH KLD KD +A TPGF+GAD++N+ NE
Sbjct: 460 RFDRQIYIGPPDIKGRSSIFKVHLRPLKLDGSLSKDALSRKLAALTPGFTGADISNVCNE 519
Query: 430 AAILAGRRGKANITLKEIDDSIDRIVAGMEG-TKMTDGKNKILVAYHEIGHAVCATLTPG 488
AA++A R ++ + + +I+R++ G+E T++ K VAYHE GHAV
Sbjct: 520 AALIAARHLSPSVQERHFEQAIERVIGGLEKKTQVLQPSEKTTVAYHEAGHAVVGWFLEH 579
Query: 489 HDPVQKVTLIPRGQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITT 548
DP+ KV++IPRG+ G +LP E L +++QLF R+ LGGR AE++ FG+ ITT
Sbjct: 580 ADPLLKVSIIPRGKGLGYAQYLPREQ-FLYTREQLFDRMCMMLGGRVAEQLFFGQ--ITT 636
Query: 549 GAAGDLQQITQIARQMVTRYGMSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDID 607
GA DL+++TQ A + ++GMSE +G + P Q +V + SE A ID
Sbjct: 637 GAQDDLRKVTQSAYAQIVQFGMSEKLGQVSFDFPR-QGETMVEK-----PYSEATAQLID 690
Query: 608 KTVRNIIESAYEVAKNHIRNNREAIDKLVDVLMEKETL 645
+ VR ++ SAY + RE ++K+ L+EKE L
Sbjct: 691 EEVRCLVRSAYNRTLELLTQCREQVEKVGRRLLEKEVL 728
>UNIPROTKB|Q2KJI7 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9913 "Bos
taurus" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0046872 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 MEROPS:M41.016
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:BC105322 IPI:IPI00686580 RefSeq:NP_001039676.1 UniGene:Bt.1657
HSSP:Q9WZ49 ProteinModelPortal:Q2KJI7 SMR:Q2KJI7 STRING:Q2KJI7
PRIDE:Q2KJI7 Ensembl:ENSBTAT00000031029 GeneID:515757
KEGG:bta:515757 CTD:10939 InParanoid:Q2KJI7 OMA:LYRFVTT
NextBio:20871990 GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
Uniprot:Q2KJI7
Length = 805
Score = 986 (352.1 bits), Expect = 2.4e-99, P = 2.4e-99
Identities = 214/467 (45%), Positives = 295/467 (63%)
Query: 194 FGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLV 253
F +G + AK ++ V F DVAG +EAK + E V FL+ P+++ +GAKIPKG +L
Sbjct: 290 FSVGETTAKV-LKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILT 348
Query: 254 GPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFID 313
GPPGTGKTLLAKA AGEA VPF ++SGSEF+EMFVGVG +RVRDLF A+ N+PC++FID
Sbjct: 349 GPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFID 408
Query: 314 EIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPG 373
EIDAV E+E TLNQLL EMDGF + V+++A TNRP+ILD AL RPG
Sbjct: 409 EIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPG 468
Query: 374 RFDRQVSVGLPDIRGREQILKVHSNNKKLD----KDVSLSVIATRTPGFSGADLANLMNE 429
RFDRQ+ +G PDI+GR I KVH KLD K+ +A+ TPGFSGAD+AN+ NE
Sbjct: 469 RFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVANVCNE 528
Query: 430 AAILAGRRGKANITLKEIDDSIDRIVAGMEG-TKMTDGKNKILVAYHEIGHAVCATLTPG 488
AA++A R +I K + +I+R++ G+E T++ + K VAYHE GHAV
Sbjct: 529 AALIAARHLSDSINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEH 588
Query: 489 HDPVQKVTLIPRGQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITT 548
DP+ KV++IPRG+ G +LP E L +++QL R+ LGGR +EE+ FG ITT
Sbjct: 589 ADPLLKVSIIPRGKGLGYAQYLPREQ-YLYTREQLLDRMCMTLGGRVSEEIFFGR--ITT 645
Query: 549 GAAGDLQQITQIARQMVTRYGMSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDID 607
GA DL+++TQ A + ++GM+E +G + P + D+V+ SE A ID
Sbjct: 646 GAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLP--RQGDMVLE----KPYSEATARLID 699
Query: 608 KTVRNIIESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVL 654
VR +I AY+ + + ++K+ +L+EKE L ++ +L
Sbjct: 700 DEVRILINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKNDMVELL 746
>RGD|1309722 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=ISO] [GO:0008053 "mitochondrial fusion"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=ISO] [GO:0042407
"cristae formation" evidence=ISO] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1309722
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
IPI:IPI00365343 Ensembl:ENSRNOT00000065957 UCSC:RGD:1309722
ArrayExpress:F1LS61 Uniprot:F1LS61
Length = 761
Score = 984 (351.4 bits), Expect = 3.9e-99, P = 3.9e-99
Identities = 211/458 (46%), Positives = 295/458 (64%)
Query: 194 FGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLV 253
F +G + AK ++ N V F DVAG +EAK + E V FL+ P+++ +GAKIPKG +L
Sbjct: 253 FSVGETTAKI-LKNNIDVRFADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAMLT 311
Query: 254 GPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFID 313
GPPGTGKTLLAKA AGEA VPF +++GSEF+EMFVGVG +RVRD+F A+ ++PC++FID
Sbjct: 312 GPPGTGKTLLAKATAGEAKVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFID 371
Query: 314 EIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPG 373
EIDA+ E+E TLNQ+L EMDGF + V+V+A TNRP+ILD AL RPG
Sbjct: 372 EIDAIGRKRGRGHLGGQSEQENTLNQMLVEMDGFNSTTNVVVLAGTNRPDILDPALTRPG 431
Query: 374 RFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVS---LS-VIATRTPGFSGADLANLMNE 429
RFDRQ+ +G PDI+GR I KVH KLD+ ++ LS +A TPGF+GAD++N+ NE
Sbjct: 432 RFDRQIYIGPPDIKGRSSIFKVHLRPLKLDESLTRDALSRKLAALTPGFTGADISNVCNE 491
Query: 430 AAILAGRRGKANITLKEIDDSIDRIVAGMEG-TKMTDGKNKILVAYHEIGHAVCATLTPG 488
AA++A R ++ + + +I+R++ G+E T++ K VAYHE GHAV
Sbjct: 492 AALIAARHLSPSVQERHFEQAIERVIGGLEKKTQVLQPSEKTTVAYHEAGHAVVGWFLEH 551
Query: 489 HDPVQKVTLIPRGQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITT 548
DP+ KV++IPRG+ G +LP E L +++QLF R+ LGGR AE++ FG+ ITT
Sbjct: 552 ADPLLKVSIIPRGKGLGYAQYLPREQ-YLYTREQLFDRMCMMLGGRVAEQLFFGQ--ITT 608
Query: 549 GAAGDLQQITQIARQMVTRYGMSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDID 607
GA DL+++TQ A + ++GMSE +G + P Q +V + SE A ID
Sbjct: 609 GAQDDLRKVTQSAYAQIVQFGMSEKLGQVSFDFPR-QGETMVEK-----PYSEATAQLID 662
Query: 608 KTVRNIIESAYEVAKNHIRNNREAIDKLVDVLMEKETL 645
+ VR ++ SAY + RE ++K+ L+EKE L
Sbjct: 663 EEVRCLVRSAYNRTLELLTQCREQVEKVGRRLLEKEVL 700
>ZFIN|ZDB-GENE-091113-41 [details] [associations]
symbol:yme1l1a "YME1-like 1a" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-091113-41 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 EMBL:CU138525 IPI:IPI00962165
Ensembl:ENSDART00000110185 Uniprot:E7EZJ5
Length = 729
Score = 983 (351.1 bits), Expect = 5.0e-99, P = 5.0e-99
Identities = 210/462 (45%), Positives = 300/462 (64%)
Query: 195 GLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVG 254
GL S +M+ +TF+ V GV+EAK + Q++V+FL+ P+KF +G K+PKG+LLVG
Sbjct: 279 GLDSSVDPVQMK---NITFEHVKGVEEAKNELQDVVEFLRNPQKFTVLGGKLPKGILLVG 335
Query: 255 PPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDE 314
PPGTGKTLLA+A+AGEA VPF+ SGSEF EMFVGVGASR+R+LF +AKA++PC++FIDE
Sbjct: 336 PPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFKEAKASAPCVIFIDE 395
Query: 315 IDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGR 374
+D+V + QT+NQLL EMDGF N GVIVI ATN E LD+AL RPGR
Sbjct: 396 LDSVGGKRIESPM--HPYSRQTINQLLAEMDGFKPNEGVIVIGATNFAEALDNALVRPGR 453
Query: 375 FDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILA 434
FD QV+V +PD++GR +IL+ + K+D + +IA T GFSGA+L NL+N+AA+ A
Sbjct: 454 FDMQVTVPIPDVKGRTEILEWYLKKIKVDSAIDAEIIARGTVGFSGAELENLVNQAALKA 513
Query: 435 GRRGKANITLKEIDDSIDRIVAGMEGTKMT-DGKNKILVAYHEIGHAVCATLTPGHDPVQ 493
GK +T+KE+ + D+I+ G E + D +NK + AYHE GHA+ A T P+
Sbjct: 514 AADGKDLVTMKELKFAKDKILMGPERRSVEIDKRNKTITAYHESGHAIVAYYTKDAMPIN 573
Query: 494 KVTLIPRGQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGD 553
K T++PRG + G LPE D ++ QL A++ +GGR AEE++FG +IT+GA+ D
Sbjct: 574 KATIMPRGPSLGHVSLLPENDRWSETRAQLLAQMDVSMGGRVAEELVFGNDQITSGASSD 633
Query: 554 LQQITQIARQMVTRYGMSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRN 612
T+IA+ MVTR+GMS+ +G T D L ++S + A +++ +R
Sbjct: 634 FDGATKIAQMMVTRFGMSDKLGVMTYSD------------LTKHSPETRAA--VEQEIRV 679
Query: 613 IIESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVL 654
+++S+YE AK ++ + L D L+ ETL+ E + +L
Sbjct: 680 LLQSSYERAKKILKTYSKEHKLLADALLTYETLNAKEIQMIL 721
>TAIR|locus:2163736 [details] [associations]
symbol:FTSH11 "FTSH protease 11" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=TAS] [GO:0009408 "response to heat" evidence=IMP]
[GO:0009644 "response to high light intensity" evidence=IMP]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0019761
"glucosinolate biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0009536
"plastid" evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005743 GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0004222 GO:GO:0009408 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0004176
EMBL:AB025622 HOGENOM:HOG000217276 GO:GO:0010304 EMBL:AY091086
EMBL:AY123027 IPI:IPI00537766 RefSeq:NP_568787.1 UniGene:At.7145
ProteinModelPortal:Q9FGM0 SMR:Q9FGM0 MEROPS:M41.018 PaxDb:Q9FGM0
PRIDE:Q9FGM0 EnsemblPlants:AT5G53170.1 GeneID:835398
KEGG:ath:AT5G53170 GeneFarm:4747 TAIR:At5g53170 InParanoid:Q9FGM0
OMA:DIMPEKN PhylomeDB:Q9FGM0 ProtClustDB:CLSN2690002
Genevestigator:Q9FGM0 Uniprot:Q9FGM0
Length = 806
Score = 976 (348.6 bits), Expect = 2.8e-98, P = 2.8e-98
Identities = 202/375 (53%), Positives = 257/375 (68%)
Query: 204 EMEPNTGV-TFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTL 262
E+ P V TF DV G D+AKQ+ +E+V++L+ P KF +G K+PKG+LL G PGTGKTL
Sbjct: 351 EITPEKNVKTFKDVKGCDDAKQELEEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTL 410
Query: 263 LAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXX 322
LAKAIAGEAGVPFF +GSEF EMFVGVGA RVR LF AK +PC++FIDEIDAV
Sbjct: 411 LAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTR 470
Query: 323 XXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVG 382
++TL+QLL EMDGF N G+IV+AATN P+ILD AL RPGRFDR + V
Sbjct: 471 KQW----EGHTKKTLHQLLVEMDGFEQNEGIIVMAATNLPDILDPALTRPGRFDRHIVVP 526
Query: 383 LPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANI 442
PD+RGRE+IL+++ K + +DV + IA TPGF+GADLANL+N AAI A G +
Sbjct: 527 SPDVRGREEILELYLQGKPMSEDVDVKAIARGTPGFNGADLANLVNIAAIKAAVEGAEKL 586
Query: 443 TLKEIDDSIDRIVAGMEG-TKMTDGKNKILVAYHEIGHAVCATLTPGHDPVQKVTLIPRG 501
+ ++++ + DRIV G E T +K L AYHE GHA+ A T G P+ K T++PRG
Sbjct: 587 SSEQLEFAKDRIVMGTERKTMFVSEDSKKLTAYHESGHAIVALNTKGAHPIHKATIMPRG 646
Query: 502 QARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQITQIA 561
A G+ LP D +SK+QL AR+ +GGR AEE+IFG ITTGA+ DL Q T++A
Sbjct: 647 SALGMVTQLPSNDETSVSKRQLLARLDVCMGGRVAEELIFGLDHITTGASSDLSQATELA 706
Query: 562 RQMVTRYGMSE-IGP 575
+ MV+ GMSE IGP
Sbjct: 707 QYMVSSCGMSEAIGP 721
Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
Identities = 144/323 (44%), Positives = 202/323 (62%)
Query: 334 EQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGREQIL 393
++TL+QLL EMDGF N G+IV+AATN P+ILD AL RPGRFDR + V PD+RGRE+IL
Sbjct: 478 KKTLHQLLVEMDGFEQNEGIIVMAATNLPDILDPALTRPGRFDRHIVVPSPDVRGREEIL 537
Query: 394 KVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDSIDR 453
+++ K + +DV + IA TPGF+GADLANL+N AAI A G ++ ++++ + DR
Sbjct: 538 ELYLQGKPMSEDVDVKAIARGTPGFNGADLANLVNIAAIKAAVEGAEKLSSEQLEFAKDR 597
Query: 454 IVAGMEG-TKMTDGKNKILVAYHEIGHAVCATLTPGHDPVQKVTLIPRGQARGLTWFLPE 512
IV G E T +K L AYHE GHA+ A T G P+ K T++PRG A G+ LP
Sbjct: 598 IVMGTERKTMFVSEDSKKLTAYHESGHAIVALNTKGAHPIHKATIMPRGSALGMVTQLPS 657
Query: 513 EDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQITQIARQMVTRYGMSE 572
D +SK+QL AR+ +GGR AEE+IFG ITTGA+ DL Q T++A+ MV+ GMSE
Sbjct: 658 NDETSVSKRQLLARLDVCMGGRVAEELIFGLDHITTGASSDLSQATELAQYMVSSCGMSE 717
Query: 573 -IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIESAYEVAKNHIRNNREA 631
IGP + + SSD+ R ID V ++ AYE K+ ++ + +
Sbjct: 718 AIGPVHIKERP--SSDMQSR--------------IDAEVVKLLREAYERVKSLLKRHEKQ 761
Query: 632 IDKLVDVLMEKETLSGDEFRAVL 654
+ L + L+E ETL+ ++ + +L
Sbjct: 762 LHTLANALLEYETLTAEDIKRIL 784
>FB|FBgn0034792 [details] [associations]
symbol:CG3499 species:7227 "Drosophila melanogaster"
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
EMBL:AE013599 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111
TIGRFAMs:TIGR01241 HSSP:Q9LCZ4 GeneTree:ENSGT00550000074836
KO:K08955 EMBL:AY051480 RefSeq:NP_726263.1 UniGene:Dm.4589
SMR:Q9W1Y0 IntAct:Q9W1Y0 MINT:MINT-924656
EnsemblMetazoa:FBtr0071906 GeneID:37636 KEGG:dme:Dmel_CG3499
UCSC:CG3499-RB FlyBase:FBgn0034792 InParanoid:Q9W1Y0
OrthoDB:EOG4Z613M GenomeRNAi:37636 NextBio:804672 Uniprot:Q9W1Y0
Length = 736
Score = 968 (345.8 bits), Expect = 2.0e-97, P = 2.0e-97
Identities = 205/457 (44%), Positives = 300/457 (65%)
Query: 204 EMEPNT-GVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTL 262
E++P VTF+DV G DEAKQ+ +E+V+FL++PEKF+ +G K+PKGVLLVGPPGTGKTL
Sbjct: 289 EVDPEEINVTFEDVKGCDEAKQELKEVVEFLKSPEKFSNLGGKLPKGVLLVGPPGTGKTL 348
Query: 263 LAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXX 322
LA+A+AGEA VPFF +G EF E+ VG GA RVRDLF AKA +PC++FIDEID+V
Sbjct: 349 LARAVAGEAKVPFFHAAGPEFDEVLVGQGARRVRDLFKAAKARAPCVIFIDEIDSVGAKR 408
Query: 323 XXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVG 382
+ QT+NQLL+EMDGF N+GVIV+ ATNR + LD AL RPGRFD +V V
Sbjct: 409 TNSVL--HPYANQTINQLLSEMDGFHQNAGVIVLGATNRRDDLDQALLRPGRFDVEVMVS 466
Query: 383 LPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANI 442
PD GR++IL ++ K L ++ L ++A T GF+GADL N++N+AA+ A G +
Sbjct: 467 TPDFTGRKEILSLYLT-KILHDEIDLDMLARGTSGFTGADLENMINQAALRAAIDGAETV 525
Query: 443 TLKEIDDSIDRIVAGMEG-TKMTDGKNKILVAYHEIGHAVCATLTPGHDPVQKVTLIPRG 501
++K ++ + D+++ G E ++ D + + AYHE GHA+ A T P+ KVT++PRG
Sbjct: 526 SMKHLETARDKVLMGPERKARLPDEEANTITAYHEGGHAIVAFYTKESHPLHKVTIMPRG 585
Query: 502 QARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQITQIA 561
+ G T ++PE++ ++K QL A + +GGRAAEE++FG +IT+GA+ DL+Q T IA
Sbjct: 586 PSLGHTAYIPEKERYHVTKAQLLAMMDTMMGGRAAEELVFGTDKITSGASSDLKQATSIA 645
Query: 562 RQMVTRYGMSE-IGPWTL-IDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIESAYE 619
MV +GMS+ +G T+ + + D L N++ + +D ++ I+ +YE
Sbjct: 646 THMVRDWGMSDKVGLRTIEASKGLGTGDT----LGPNTI-----EAVDAEIKRILSDSYE 696
Query: 620 VAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVLSE 656
AK +R + L + L++ ETL D+ +A+L+E
Sbjct: 697 RAKAILRKHTREHKALAEALLKYETLDADDIKAILNE 733
>WB|WBGene00010842 [details] [associations]
symbol:ymel-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:Z49128 PIR:T23690
RefSeq:NP_499298.2 ProteinModelPortal:P54813 SMR:P54813
MEROPS:M41.A11 PaxDb:P54813 EnsemblMetazoa:M03C11.5.1
EnsemblMetazoa:M03C11.5.2 GeneID:176460 KEGG:cel:CELE_M03C11.5
UCSC:M03C11.5.1 CTD:176460 WormBase:M03C11.5
GeneTree:ENSGT00550000074836 InParanoid:P54813 OMA:KWNQYES
NextBio:892672 Uniprot:P54813
Length = 723
Score = 968 (345.8 bits), Expect = 2.0e-97, P = 2.0e-97
Identities = 206/456 (45%), Positives = 298/456 (65%)
Query: 204 EMEP-NTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTL 262
E+ P + VTFDDV G+DEAK + +EIV +L+ PEK++ +G ++PKGVLLVGPPGTGKTL
Sbjct: 237 EVNPEDVQVTFDDVRGMDEAKLEVEEIVDYLKDPEKYSRLGGRLPKGVLLVGPPGTGKTL 296
Query: 263 LAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXX 322
LA+AIAGEA VPFF +GSEF E+ VG GA RVRDLF+KAKA +PC++FIDEID+V
Sbjct: 297 LARAIAGEAQVPFFHTAGSEFDEVLVGQGARRVRDLFDKAKARAPCIIFIDEIDSVGSKR 356
Query: 323 XXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVG 382
+ QT+NQLL+EMDGFT N G+IVIAATNR + LD AL RPGRFD +V+V
Sbjct: 357 VSNSI--HPYANQTINQLLSEMDGFTRNEGIIVIAATNRVDDLDKALLRPGRFDVRVTVP 414
Query: 383 LPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANI 442
PD+ GR I + + + V+A + GF+GAD+ N++N+AA+ A +
Sbjct: 415 KPDLAGRVDIFNFYLSKIVHSGGIDPKVLAKGSTGFTGADIENMVNQAALKAATDNAVEV 474
Query: 443 TLKEIDDSIDRIVAG--MEGTKMTDGKNKILVAYHEIGHAVCATLTPGHDPVQKVTLIPR 500
T+ +D++ DR++ G G ++ D + AYHE GH + + T P+ KVT+IPR
Sbjct: 475 TMAYLDEARDRVLMGPARTGGRIPDEEANRNTAYHEAGHTLVSLYTKDATPLHKVTIIPR 534
Query: 501 GQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQITQI 560
GQ+ G T LPE+D ++K Q+ A + +GGR AEE+IFG+ ++TTGAA DL + TQ+
Sbjct: 535 GQSLGHTAMLPEKDSYQLTKAQMLATLDVMMGGRVAEELIFGDDKVTTGAADDLSKATQL 594
Query: 561 ARQMVTRYGMSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIESAYE 619
A QMV +GMS+ +G L D + Q ++ + ++ ++ + A+ ID + +++ +Y+
Sbjct: 595 AVQMVKVFGMSDKVG---LRDFTAQDNESALVKVS--DLAPQTAELIDAEINRVLQESYK 649
Query: 620 VAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVLS 655
AK + ++ L + L+E ETLS DE + V+S
Sbjct: 650 RAKVILETKKKEHQLLAEALLEYETLSADEVKRVIS 685
>CGD|CAL0002950 [details] [associations]
symbol:YME1 species:5476 "Candida albicans" [GO:0031942
"i-AAA complex" evidence=IEA] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process" evidence=IEA]
[GO:0001300 "chronological cell aging" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 CGD:CAL0002950 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.004
EMBL:AACQ01000068 EMBL:AACQ01000067 KO:K08955 RefSeq:XP_716504.1
RefSeq:XP_716560.1 ProteinModelPortal:Q5A458 SMR:Q5A458
STRING:Q5A458 GeneID:3641816 GeneID:3641839 KEGG:cal:CaO19.1252
KEGG:cal:CaO19.8836 Uniprot:Q5A458
Length = 687
Score = 960 (343.0 bits), Expect = 1.4e-96, P = 1.4e-96
Identities = 210/464 (45%), Positives = 292/464 (62%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGE 270
V F DV G DEA+ + +EIV FL+ P KF +G K+PKGVLL GPPGTGKTLLA+A AGE
Sbjct: 222 VRFKDVQGCDEARAELEEIVDFLKDPSKFTGLGGKLPKGVLLTGPPGTGKTLLARATAGE 281
Query: 271 AGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXN 330
AGVPFF +SGSEF E++VGVGA R+R+LF++A+ +P ++FIDE+DA+
Sbjct: 282 AGVPFFFMSGSEFDELYVGVGAKRIRELFSQARDKAPAIIFIDELDAIGGKRNPKDQAY- 340
Query: 331 DEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGRE 390
+QTLNQLL E+DGF+ G+I+I ATN PE LD AL RPGRFD++V V LPD+RGR
Sbjct: 341 --AKQTLNQLLVELDGFSQTEGIIIIGATNFPESLDKALTRPGRFDKEVIVDLPDVRGRI 398
Query: 391 QILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDS 450
ILK H N + DV S+IA TPG SGA+L NL+N+AA+ A + + + + +
Sbjct: 399 DILKHHMQNVETADDVDPSIIARGTPGLSGAELMNLVNQAAVHASQLSAPAVDMNHFEWA 458
Query: 451 IDRIVAGMEGTKMT-DGKNKILVAYHEIGHAVCATLTPGHDPVQKVTLIPRGQARGLTWF 509
D+I+ G KM +++I AYHE GHA+ A + G P+ K T++PRG+A G+T+
Sbjct: 459 KDKILMGAAKKKMVITEESRINTAYHEAGHAIMAMFSKGATPLYKATILPRGRALGITFQ 518
Query: 510 LPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQITQIARQMVTRYG 569
LPE D +SKQ+ FAR+ +GG+ AEE+I G+ +T+G A DL T +AR MVT YG
Sbjct: 519 LPEMDKVDMSKQECFARLDVCMGGKIAEEMINGKENVTSGCASDLSNATSVARAMVTSYG 578
Query: 570 MSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIESAYEVAKNHIRNN 628
MS+ IGP L D +S +R +A N + + L D +K R ++ Y+
Sbjct: 579 MSDKIGPVRLSD-DWESWSPQIRNMADNEVRDYLLDS-EKRTRKLL---YD--------K 625
Query: 629 REAIDKLVDVLMEKETLSGDEFRAVLSEFTDVSADQVDRTPIRE 672
R + +L + L+E ETL+ +E V+ A + T I++
Sbjct: 626 RLELKRLAEGLLEYETLTKEEMEKVVKGEPINKAKTMSNTVIKK 669
>SGD|S000006228 [details] [associations]
symbol:YME1 "Catalytic subunit of the mitochondrial inner
membrane i-AAA protease" species:4932 "Saccharomyces cerevisiae"
[GO:0006457 "protein folding" evidence=IMP] [GO:0005743
"mitochondrial inner membrane" evidence=IEA;IDA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IGI;IMP]
[GO:0006515 "misfolded or incompletely synthesized protein
catabolic process" evidence=IMP] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0031942 "i-AAA complex"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
SGD:S000006228 GO:GO:0005524 GO:GO:0006457 GO:GO:0046872
GO:GO:0004222 EMBL:Z71255 EMBL:BK006949 GO:GO:0006515
eggNOG:COG0465 TIGRFAMs:TIGR01241 EMBL:Z49274 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942
GeneTree:ENSGT00550000074836 KO:K08955 OrthoDB:EOG4FR40W
EMBL:L14616 EMBL:X81067 EMBL:D16332 PIR:S54498 RefSeq:NP_015349.1
ProteinModelPortal:P32795 SMR:P32795 IntAct:P32795 STRING:P32795
PaxDb:P32795 PeptideAtlas:P32795 EnsemblFungi:YPR024W GeneID:856135
KEGG:sce:YPR024W CYGD:YPR024w OMA:SEFDEVY NextBio:981236
Genevestigator:P32795 GermOnline:YPR024W Uniprot:P32795
Length = 747
Score = 943 (337.0 bits), Expect = 8.7e-95, P = 8.7e-95
Identities = 204/448 (45%), Positives = 281/448 (62%)
Query: 209 TGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIA 268
T V FDDV G DEA+ + +EIV FL+ P K+ ++G K+PKGVLL GPPGTGKTLLA+A A
Sbjct: 276 TNVKFDDVCGCDEARAELEEIVDFLKDPTKYESLGGKLPKGVLLTGPPGTGKTLLARATA 335
Query: 269 GEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXX 328
GEAGV FF +SGSEF E++VGVGA R+RDLF +A++ +P ++FIDE+DA+
Sbjct: 336 GEAGVDFFFMSGSEFDEVYVGVGAKRIRDLFAQARSRAPAIIFIDELDAIGGKRNPKDQA 395
Query: 329 XNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRG 388
+QTLNQLL E+DGF+ SG+I+I ATN PE LD AL RPGRFD+ V+V LPD+RG
Sbjct: 396 Y---AKQTLNQLLVELDGFSQTSGIIIIGATNFPEALDKALTRPGRFDKVVNVDLPDVRG 452
Query: 389 REQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEID 448
R ILK H L +V ++IA TPG SGA+LANL+N+AA+ A ++ ++ + +
Sbjct: 453 RADILKHHMKKITLADNVDPTIIARGTPGLSGAELANLVNQAAVYACQKNAVSVDMSHFE 512
Query: 449 DSIDRIVAGMEGTKM--TDGKNKILVAYHEIGHAVCATLTPGHDPVQKVTLIPRGQARGL 506
+ D+I+ G E M TD K A+HE GHA+ A T G P+ K T++PRG+A G+
Sbjct: 513 WAKDKILMGAERKTMVLTDAARKA-TAFHEAGHAIMAKYTNGATPLYKATILPRGRALGI 571
Query: 507 TWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQITQIARQMVT 566
T+ LPE D I+K++ AR+ +GG+ AEE+I+G+ T+G DLQ T AR MVT
Sbjct: 572 TFQLPEMDKVDITKRECQARLDVCMGGKIAEELIYGKDNTTSGCGSDLQSATGTARAMVT 631
Query: 567 RYGMSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIESAYEVAKNHI 625
+YGMS+ +GP L + S S K+ D D V +++ + E A+ +
Sbjct: 632 QYGMSDDVGPVNLSENW-------------ESWSNKIRDIADNEVIELLKDSEERARRLL 678
Query: 626 RNNREAIDKLVDVLMEKETLSGDEFRAV 653
+ +L L+E ETL E V
Sbjct: 679 TKKNVELHRLAQGLIEYETLDAHEIEQV 706
>FB|FBgn0024992 [details] [associations]
symbol:CG2658 species:7227 "Drosophila melanogaster"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9LCZ4
HOGENOM:HOG000226301 MEROPS:M41.A12 EMBL:AL023874
ProteinModelPortal:O76867 SMR:O76867 PaxDb:O76867 PRIDE:O76867
FlyBase:FBgn0024992 InParanoid:O76867 OrthoDB:EOG4V6WXK
ArrayExpress:O76867 Bgee:O76867 Uniprot:O76867
Length = 819
Score = 941 (336.3 bits), Expect = 1.4e-94, P = 1.4e-94
Identities = 198/463 (42%), Positives = 295/463 (63%)
Query: 200 KAKFEM-EP---NTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGP 255
+AKF + +P GV F DVAG+ EAKQ+ +E V +L++PEK+ +GAK+P+G LL+GP
Sbjct: 323 RAKFTLVDPFDGGRGVLFRDVAGLSEAKQEVKEFVDYLKSPEKYQRLGAKVPRGALLLGP 382
Query: 256 PGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEI 315
PG GKTLLAKA+A EA VPF S++GSEFIEM G+GA+RVRDLF + K +PC+++IDEI
Sbjct: 383 PGCGKTLLAKAVATEAQVPFLSMNGSEFIEMIGGLGAARVRDLFKEGKKRAPCIIYIDEI 442
Query: 316 DAVXXXXXXXXXX---XNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRP 372
DA+ + E EQTLNQLL EMDG GV+++A+TNR +ILD AL RP
Sbjct: 443 DAIGRQRSGTESMGQGSSGESEQTLNQLLVEMDGMATKEGVLMLASTNRADILDKALLRP 502
Query: 373 GRFDRQVSVGLPDIRGREQILKVHSNNKKLDKD-VSLSV-IATRTPGFSGADLANLMNEA 430
GRFDR + + LP + R++I + H ++ KL+ + S +A TPGFSGAD+AN+ NEA
Sbjct: 503 GRFDRHILIDLPTLAERKEIFEKHLSSVKLESPPTTFSQRLARLTPGFSGADIANVCNEA 562
Query: 431 AILAGRRGKANITLKEIDDSIDRIVAGMEGTK--MTDGKNKILVAYHEIGHAVCATLTPG 488
A+ A R + ++ K ++ +++R+V G E ++ + K+ +AYHE GHA+ + P
Sbjct: 563 ALHAARNTQMEVSSKNLEYAVERLVGGTEKRSHALSLAERKV-IAYHESGHALVGWMLPN 621
Query: 489 HDPVQKVTLIPRGQ-ARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEIT 547
D + KVT++PR A G + P E L SK++LF ++ LGGRAAE ++F IT
Sbjct: 622 SDILLKVTIVPRTSLALGFAQYTPSEQH-LYSKEELFDKMCMALGGRAAENLVFNR--IT 678
Query: 548 TGAAGDLQQITQIARQMVTRYGMSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDI 606
TGA DL+++T+IA + ++GM++ +GP + D M + S + I
Sbjct: 679 TGAQNDLEKVTKIAYSQIKKFGMNDTLGPIYVRDADETEGGGAMGSGGKKPFSRAMESMI 738
Query: 607 DKTVRNIIESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDE 649
D R+++ SAY+ + + +R+ ++KL + L+EKETL D+
Sbjct: 739 DNEARHVVASAYQTTEGILTTHRDKLEKLAEALLEKETLDYDQ 781
>GENEDB_PFALCIPARUM|PFL1925w [details] [associations]
symbol:PFL1925w "cell division protein FtsH,
putative" species:5833 "Plasmodium falciparum" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 930 (332.4 bits), Expect = 2.1e-93, P = 2.1e-93
Identities = 196/451 (43%), Positives = 295/451 (65%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGE 270
+ F+++AG+DE+K + E+V F++ EK+ +GA++PKGVLLVGPPG+GKT+LA+A+A E
Sbjct: 146 IRFEEIAGIDESKLELLEVVDFIKNREKYHEMGARMPKGVLLVGPPGSGKTMLARAVATE 205
Query: 271 AGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXN 330
A VP+ SG EFIE++VG GA R+R LF A++ +P +VFIDEIDA+
Sbjct: 206 ANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEIDAIGGKRSSGSVNGA 265
Query: 331 DERE--QTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRG 388
+RE QTLNQLL EMDGF+ ++VI ATNR + LDSAL RPGRFDR V V LPDI G
Sbjct: 266 GQREHDQTLNQLLVEMDGFSNTVHIMVIGATNRIDTLDSALLRPGRFDRIVYVPLPDING 325
Query: 389 REQILKVHSNNKKLD-KDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEI 447
R++IL+++ K D K + IA TPGFSGADL N++NEA ILA R K+ +T+ E+
Sbjct: 326 RKKILEIYIKKIKSDLKLEDIEKIARLTPGFSGADLENVVNEATILATRNNKSLVTINEL 385
Query: 448 DDSIDRIVAGME--GTKMTDGKNKILVAYHEIGHAVCAT-LTPGHDPVQKVTLIPRGQAR 504
++ D++ G E + +D + +I AYHE GHA+ A L P DP+ K T+I RG A
Sbjct: 386 YEARDKVSMGPERKSLRQSDHQRRI-TAYHEAGHAIVAYFLQPKTDPIHKATIISRGNAL 444
Query: 505 GLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQITQIARQM 564
G +P +D K Q+ A++ +GGR AEE++FG++E ++GA+ D+ + T+IA +M
Sbjct: 445 GYVEQIPVDDRHNYFKSQMEAKLAVCMGGRTAEEIVFGKSETSSGASSDISRATEIAYKM 504
Query: 565 VTRYGMSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIESAYEVAKN 623
VT +GMS+ +GP ++ + D + N +S + I+ V++++E +++
Sbjct: 505 VTEWGMSDKLGP---LNYKKRMGDGY----SSNRLSAQTVSSIEVEVKSLVEKGKSLSEE 557
Query: 624 HIRNNREAIDKLVDVLMEKETLSGDEFRAVL 654
+R +R+ +D L L++KETLSG+E + ++
Sbjct: 558 ILRRHRKELDNLAFALLDKETLSGEEIKNII 588
>UNIPROTKB|Q8I526 [details] [associations]
symbol:PFL1925w "Cell division protein FtsH, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 930 (332.4 bits), Expect = 2.1e-93, P = 2.1e-93
Identities = 196/451 (43%), Positives = 295/451 (65%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGE 270
+ F+++AG+DE+K + E+V F++ EK+ +GA++PKGVLLVGPPG+GKT+LA+A+A E
Sbjct: 146 IRFEEIAGIDESKLELLEVVDFIKNREKYHEMGARMPKGVLLVGPPGSGKTMLARAVATE 205
Query: 271 AGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXN 330
A VP+ SG EFIE++VG GA R+R LF A++ +P +VFIDEIDA+
Sbjct: 206 ANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEIDAIGGKRSSGSVNGA 265
Query: 331 DERE--QTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRG 388
+RE QTLNQLL EMDGF+ ++VI ATNR + LDSAL RPGRFDR V V LPDI G
Sbjct: 266 GQREHDQTLNQLLVEMDGFSNTVHIMVIGATNRIDTLDSALLRPGRFDRIVYVPLPDING 325
Query: 389 REQILKVHSNNKKLD-KDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEI 447
R++IL+++ K D K + IA TPGFSGADL N++NEA ILA R K+ +T+ E+
Sbjct: 326 RKKILEIYIKKIKSDLKLEDIEKIARLTPGFSGADLENVVNEATILATRNNKSLVTINEL 385
Query: 448 DDSIDRIVAGME--GTKMTDGKNKILVAYHEIGHAVCAT-LTPGHDPVQKVTLIPRGQAR 504
++ D++ G E + +D + +I AYHE GHA+ A L P DP+ K T+I RG A
Sbjct: 386 YEARDKVSMGPERKSLRQSDHQRRI-TAYHEAGHAIVAYFLQPKTDPIHKATIISRGNAL 444
Query: 505 GLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQITQIARQM 564
G +P +D K Q+ A++ +GGR AEE++FG++E ++GA+ D+ + T+IA +M
Sbjct: 445 GYVEQIPVDDRHNYFKSQMEAKLAVCMGGRTAEEIVFGKSETSSGASSDISRATEIAYKM 504
Query: 565 VTRYGMSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIESAYEVAKN 623
VT +GMS+ +GP ++ + D + N +S + I+ V++++E +++
Sbjct: 505 VTEWGMSDKLGP---LNYKKRMGDGY----SSNRLSAQTVSSIEVEVKSLVEKGKSLSEE 557
Query: 624 HIRNNREAIDKLVDVLMEKETLSGDEFRAVL 654
+R +R+ +D L L++KETLSG+E + ++
Sbjct: 558 ILRRHRKELDNLAFALLDKETLSGEEIKNII 588
>POMBASE|SPCC965.04c [details] [associations]
symbol:SPCC965.04c "mitochondrial inner membrane i-AAA
protease complex subunit Yme1 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0004176 "ATP-dependent peptidase
activity" evidence=ISO] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0031942 "i-AAA complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC965.04c GO:GO:0016021 GO:GO:0005524 EMBL:CU329672
GO:GO:0046872 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942 PIR:T41657
RefSeq:NP_588514.1 ProteinModelPortal:O59824 SMR:O59824
STRING:O59824 EnsemblFungi:SPCC965.04c.1 GeneID:2538746
KEGG:spo:SPCC965.04c KO:K08955 OMA:LANANMS OrthoDB:EOG4FR40W
NextBio:20799930 Uniprot:O59824
Length = 709
Score = 929 (332.1 bits), Expect = 2.7e-93, P = 2.7e-93
Identities = 196/456 (42%), Positives = 294/456 (64%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGE 270
V F DV GVDEAK++ +EIV FL+ P F +G K+P+GVLL GPPGTGKT+LA+A+AGE
Sbjct: 264 VRFSDVQGVDEAKEELEEIVDFLRDPTHFTRLGGKLPRGVLLTGPPGTGKTMLARAVAGE 323
Query: 271 AGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXN 330
A VPFF +SGS+F EM+VGVGA RVR+LF A+ +P ++FIDE+DA+
Sbjct: 324 ANVPFFFMSGSQFDEMYVGVGAKRVRELFAAARKQAPSIIFIDELDAIGQKRNARDAA-- 381
Query: 331 DEREQTLNQLLTEMDGFTGNSG----VIVIAATNRPEILDSALHRPGRFDRQVSVGLPDI 386
QTLNQLL ++DGF+ N V+ I ATN PE LD AL RPGRFDR + V LPD+
Sbjct: 382 -HMRQTLNQLLVDLDGFSKNEDLAHPVVFIGATNFPESLDPALTRPGRFDRHIHVPLPDV 440
Query: 387 RGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKE 446
RGR IL H+ + L KDV LS+IA T GF+GADLANL+N+AA+ A + +++++
Sbjct: 441 RGRLAILLQHTRHVPLGKDVDLSIIARGTSGFAGADLANLINQAAVYASKNLSTAVSMRD 500
Query: 447 IDDSIDRIVAGMEG-TKMTDGKNKILVAYHEIGHAVCATLTPGHDPVQKVTLIPRGQARG 505
++ S DRI+ G E + +NK++ AYHE GHA+ A T K T++PRG + G
Sbjct: 501 LEWSKDRILMGAERKSAFITPENKLMTAYHEGGHALVALFTKNAMRPYKATIMPRGSSLG 560
Query: 506 LTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQITQIARQMV 565
+T LP+ D ++++ A + +GGRAAEE+++G+ +IT+GA D+ + TQ+AR+MV
Sbjct: 561 MTISLPDMDKDSWTREEYLAMLDVTMGGRAAEELLYGKDKITSGAHNDIDKATQVARRMV 620
Query: 566 TRYGMSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIESAYEVAKNH 624
T +GMS+ IGP +L + + + R L ++ +++++E++YE + +
Sbjct: 621 TEFGMSDRIGPVSL-EAEMDNLSPATRAL------------VESEIKSLLEASYERSLSL 667
Query: 625 IRNNREAIDKLVDVLMEKETLSGDEFRAVLSEFTDV 660
++++++ +D L L++ E L+ +E V+ D+
Sbjct: 668 LKSHKKELDALATALVDYEFLTAEEMNRVVKGDRDL 703
>UNIPROTKB|I3LLQ8 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0006508 GO:GO:0040014 GO:GO:0004222 GO:GO:0042552
GO:GO:0007409 GO:GO:0030163 GeneTree:ENSGT00530000063070
GO:GO:0017111 GO:GO:0042407 GO:GO:0008053 GO:GO:0034982
TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675
GO:GO:0060013 EMBL:FP565334 Ensembl:ENSSSCT00000025900
Uniprot:I3LLQ8
Length = 597
Score = 917 (327.9 bits), Expect = 5.0e-92, P = 5.0e-92
Identities = 208/460 (45%), Positives = 285/460 (61%)
Query: 194 FGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPK-GVLL 252
F +G + AK ++ V F DVAG +EAK + E V FL+ P+++ +GAKIPK G +L
Sbjct: 80 FSVGETTAKV-LKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKKGAIL 138
Query: 253 VGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFI 312
GPPGTGKTLLAKA AGEA VPF ++SGSEF+EMFVGVG +RVRDLF A+ N+PC++FI
Sbjct: 139 TGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFI 198
Query: 313 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRP 372
DEIDAV E+E TLNQLL EMDGF + V+++A TNRP+ILD AL RP
Sbjct: 199 DEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRP 258
Query: 373 GRFDRQVSVGLPDIRGREQILKVHSNNKKLD----KDVSLSVIATRTPGFSGADLANLMN 428
GRFDRQ+ +G PDI+GR I KVH KLD K+ +A+ TPGFSGAD+AN+ N
Sbjct: 259 GRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVANVCN 318
Query: 429 EAAILAGRRGKANITLKEIDDSIDRIVAGMEG-TKMTDGKNKILVAYHEIGHAVCATLTP 487
EAA++A R +I K + +I+R++ G+E T++ + K VAYHE GHAV
Sbjct: 319 EAALIAARHLSDSINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLE 378
Query: 488 GHDPVQKVTLIPRGQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAA-EEVIFGEAEI 546
DP+ KV++IPRG+ G +LP+E L +K+QL R+ G + FG I
Sbjct: 379 HADPLLKVSIIPRGKGLGYAQYLPKEQ-YLYTKEQLLDRMCMTPGWPCGPRKSSFGR--I 435
Query: 547 TTGAAGDLQQITQIARQMVTRYGMSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADD 605
TTGA D +++TQ A + ++GM+E +G + P + D+V+ SE A
Sbjct: 436 TTGAQDD-RKVTQSAYAQIVQFGMNEKVGQISFDLP--RQGDMVLE----KPYSEATARL 488
Query: 606 IDKTVRNIIESAYEVAKNHIRNNREAIDKLVDVLMEKETL 645
ID VR +I AY+ + + ++K+ +L+EKE L
Sbjct: 489 IDDEVRILINDAYKRTVALLTEKKADVEKVALLLLEKEVL 528
>UNIPROTKB|A7E2Z6 [details] [associations]
symbol:SPG7 "SPG7 protein" species:9913 "Bos taurus"
[GO:0008089 "anterograde axon cargo transport" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
MEROPS:M41.006 CTD:6687 KO:K09552 OMA:MMDHEAK OrthoDB:EOG4PG60F
EMBL:DAAA02046269 EMBL:BC151632 IPI:IPI00866907
RefSeq:NP_001095492.1 UniGene:Bt.11239 SMR:A7E2Z6 STRING:A7E2Z6
Ensembl:ENSBTAT00000032500 GeneID:515269 KEGG:bta:515269
InParanoid:A7E2Z6 NextBio:20871741 Uniprot:A7E2Z6
Length = 779
Score = 902 (322.6 bits), Expect = 1.9e-90, P = 1.9e-90
Identities = 195/451 (43%), Positives = 285/451 (63%)
Query: 210 GVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
GV+F DVAG+ EAK + +E V +L++PE+F +GAK+PKG LL+GPPG GKTLLAKA+A
Sbjct: 305 GVSFKDVAGMHEAKLEVKEFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVAT 364
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXX- 328
EA VPF +++G EF+E+ G+GA+RVR LF +A+A +PC+V+IDEIDAV
Sbjct: 365 EAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTAVSGF 424
Query: 329 XNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRG 388
N E EQTLNQLL EMDG VIV+AATNR +ILD+AL RPGR DR V + LP ++
Sbjct: 425 SNTEEEQTLNQLLVEMDGMGTTDHVIVLAATNRADILDNALLRPGRLDRHVFIDLPTLQE 484
Query: 389 REQILKVHSNNKKLDKDVSL--SVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKE 446
R++I + H + KL + S +A TPGFSGAD+AN+ NEAA+ A R G +
Sbjct: 485 RKEIFEQHLKSLKLTRASSFYSQRLAELTPGFSGADIANICNEAALHAAREGHTAVHTSN 544
Query: 447 IDDSIDRIVAGM-EGTKMTDGKNKILVAYHEIGHAVCATLTPGHDPVQKVTLIPRGQAR- 504
+D +++R+VAG + +K+ + + +VA+HE GHA+ L + V KV++ PR A
Sbjct: 545 LDYAVERVVAGTAKKSKVLSKEEQKVVAFHESGHALVGWLLEHTEAVMKVSITPRTNAAL 604
Query: 505 GLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQITQIARQM 564
G LP D L +++QLF R+ LGGRA+E + F +T+GA DL+++T+IA M
Sbjct: 605 GFAQMLPR-DQHLFTREQLFERMCMALGGRASESISFNR--VTSGAQDDLRKVTRIAYSM 661
Query: 565 VTRYGMS-EIGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIESAYEVAKN 623
V ++GM+ IGP + P Q + + R S+ L ID R ++ +AY +
Sbjct: 662 VKQFGMAPSIGPVSF--PEAQEG---VTGIGRRPFSQGLQQMIDHEARLLVATAYRHTEQ 716
Query: 624 HIRNNREAIDKLVDVLMEKETLSGDEFRAVL 654
+R+N + + L L+EKE ++ ++ A++
Sbjct: 717 VLRDNLDKLHALASALLEKEVINYEDIEALI 747
>DICTYBASE|DDB_G0293388 [details] [associations]
symbol:DDB_G0293388 "ATP-dependent metalloprotease"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0293388 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:AAFI02000204
RefSeq:XP_629167.2 ProteinModelPortal:Q54BW7 STRING:Q54BW7
MEROPS:M41.A16 EnsemblProtists:DDB0304811 GeneID:8629188
KEGG:ddi:DDB_G0293388 InParanoid:Q54BW7 OMA:ICLAGRA Uniprot:Q54BW7
Length = 767
Score = 889 (318.0 bits), Expect = 4.6e-89, P = 4.6e-89
Identities = 198/429 (46%), Positives = 271/429 (63%)
Query: 201 AKFEMEPN-TGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTG 259
AK E N T +FDDV G+ E K++ +EIV +L P K+ ++GAK+PKGVLL G PGTG
Sbjct: 286 AKEYDETNQTPTSFDDVKGIQEVKEELEEIVDYLLHPTKYNSIGAKLPKGVLLSGEPGTG 345
Query: 260 KTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVX 319
KTLLA+AIAGEAGV F +GS F E +VGVG+ RVR+LFN A+ PC++FIDEIDAV
Sbjct: 346 KTLLARAIAGEAGVSFLYTTGSSFDEKYVGVGSRRVRELFNAAREKQPCIIFIDEIDAVG 405
Query: 320 XXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQV 379
+TL QLLTEMDGF GNS +++I ATN P LD AL RPGRFDR +
Sbjct: 406 KSRNTA------HHNETLLQLLTEMDGFEGNSQIMIIGATNAPNSLDPALLRPGRFDRHI 459
Query: 380 SVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGK 439
SV +PD++GR +I+ + K +V IA TPGF+GADL+NL+N AAI A + GK
Sbjct: 460 SVPIPDMKGRSEIIDHYLKKVKHTVEVKADTIARATPGFTGADLSNLINTAAIKAVQNGK 519
Query: 440 ANITLKEIDDSIDRIVAGME--GTKMTDGKNKILVAYHEIGHAVCATLTPGHDPVQKVTL 497
I++K+IDD+ D I+ G M++ + AYHE GHA+ A +T DP+ K T+
Sbjct: 520 ETISIKQIDDARDDILMGRARLNAVMSEEARRN-TAYHEAGHALVAAMTEAADPIHKATI 578
Query: 498 IPRGQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQI 557
+ RGQA G+ LPE D +++Q+ AR+ L GRAAEE+ FG +T+GA+ D QQ
Sbjct: 579 VQRGQALGMVSQLPEMDHVQYTRKQMMARLAICLAGRAAEEIFFGVDGVTSGASSDFQQA 638
Query: 558 TQIARQMVTRYGMSE-IGPWTLID---PSVQS--SDVVMRMLARN-SMSEKLA----DDI 606
+ +A M+T++GMS+ +G D P VQ D V +L + S++L D++
Sbjct: 639 SSLAFSMITKWGMSDKVGFIYHKDKTSPEVQKIIEDEVKDLLDKQYQYSKELIIKNRDNM 698
Query: 607 DKTVRNIIE 615
+K V ++E
Sbjct: 699 EKLVGQLLE 707
Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
Identities = 135/323 (41%), Positives = 200/323 (61%)
Query: 335 QTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGREQILK 394
+TL QLLTEMDGF GNS +++I ATN P LD AL RPGRFDR +SV +PD++GR +I+
Sbjct: 415 ETLLQLLTEMDGFEGNSQIMIIGATNAPNSLDPALLRPGRFDRHISVPIPDMKGRSEIID 474
Query: 395 VHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDSIDRI 454
+ K +V IA TPGF+GADL+NL+N AAI A + GK I++K+IDD+ D I
Sbjct: 475 HYLKKVKHTVEVKADTIARATPGFTGADLSNLINTAAIKAVQNGKETISIKQIDDARDDI 534
Query: 455 VAGME--GTKMTDGKNKILVAYHEIGHAVCATLTPGHDPVQKVTLIPRGQARGLTWFLPE 512
+ G M++ + AYHE GHA+ A +T DP+ K T++ RGQA G+ LPE
Sbjct: 535 LMGRARLNAVMSEEARRN-TAYHEAGHALVAAMTEAADPIHKATIVQRGQALGMVSQLPE 593
Query: 513 EDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQITQIARQMVTRYGMSE 572
D +++Q+ AR+ L GRAAEE+ FG +T+GA+ D QQ + +A M+T++GMS
Sbjct: 594 MDHVQYTRKQMMARLAICLAGRAAEEIFFGVDGVTSGASSDFQQASSLAFSMITKWGMS- 652
Query: 573 IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIESAYEVAKNHIRNNREAI 632
D V + ++ S ++ I+ V+++++ Y+ +K I NR+ +
Sbjct: 653 --------------DKVGFIYHKDKTSPEVQKIIEDEVKDLLDKQYQYSKELIIKNRDNM 698
Query: 633 DKLVDVLMEKETLSGDEFRAVLS 655
+KLV L+EKETL+G+E +L+
Sbjct: 699 EKLVGQLLEKETLTGEEILKILN 721
>MGI|MGI:2385906 [details] [associations]
symbol:Spg7 "spastic paraplegia 7 homolog (human)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IMP] [GO:0007155 "cell adhesion" evidence=TAS] [GO:0008089
"anterograde axon cargo transport" evidence=IMP] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=TAS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 MGI:MGI:2385906 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0030155 GO:GO:0031966 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0007155 GO:GO:0004222
GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOVERGEN:HBG050184 GO:GO:0017111
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 MEROPS:M41.006
CTD:6687 KO:K09552 ChiTaRS:SPG7 EMBL:AF512565 EMBL:AF547215
EMBL:AK145540 EMBL:BC024466 EMBL:BC024986 EMBL:BC051051
EMBL:BC096690 IPI:IPI00170128 RefSeq:NP_694816.3 UniGene:Mm.292075
ProteinModelPortal:Q3ULF4 SMR:Q3ULF4 STRING:Q3ULF4
PhosphoSite:Q3ULF4 PaxDb:Q3ULF4 PRIDE:Q3ULF4
Ensembl:ENSMUST00000108868 GeneID:234847 KEGG:mmu:234847
UCSC:uc009nud.1 InParanoid:Q3ULF4 NextBio:382391 Bgee:Q3ULF4
CleanEx:MM_SPG7 Genevestigator:Q3ULF4 Uniprot:Q3ULF4
Length = 781
Score = 887 (317.3 bits), Expect = 7.5e-89, P = 7.5e-89
Identities = 190/451 (42%), Positives = 284/451 (62%)
Query: 210 GVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
GV+F DVAG+ EAK + +E V +L++PE+F +GAK+PKG LL+GPPG GKTLLAKA+A
Sbjct: 305 GVSFQDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVAT 364
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXX- 328
EA VPF +++G EF+E+ G+GA+RVR LF +A+A +PC+V+IDEIDAV
Sbjct: 365 EAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTSMSGF 424
Query: 329 XNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRG 388
N E EQTLNQLL EMDG VIV+A+TNR ++LD+AL RPGR DR V + LP ++
Sbjct: 425 SNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTLQE 484
Query: 389 REQILKVHSNNKKLDKDVSL--SVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKE 446
R +I + H KL + S +A TPGFSGAD+AN+ NEAA+ A R G ++
Sbjct: 485 RREIFEQHLKGLKLTQPSSFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTFN 544
Query: 447 IDDSIDRIVAGM-EGTKMTDGKNKILVAYHEIGHAVCATLTPGHDPVQKVTLIPRGQAR- 504
+ +++R++AG + +K+ + + +VA+HE GHA+ L + V KV++ PR A
Sbjct: 545 FEYAVERVIAGTAKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAAL 604
Query: 505 GLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQITQIARQM 564
G + LP D L +K+QLF R+ LGGRAAE + F + +T+GA DL+++T+IA M
Sbjct: 605 GFSQMLPR-DQYLFTKEQLFERMCMALGGRAAEAISF--SRVTSGAQDDLRKVTRIAYSM 661
Query: 565 VTRYGMS-EIGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIESAYEVAKN 623
V ++GM+ IGP + P Q + + R S+ L +D + ++ AY +
Sbjct: 662 VKQFGMAPSIGPVSF--PEAQEG---LMGIGRRPFSQGLQQMMDHEAKLLVAKAYRHTEK 716
Query: 624 HIRNNREAIDKLVDVLMEKETLSGDEFRAVL 654
+ +N + + L + L+EKE ++ ++ A++
Sbjct: 717 VLLDNLDKLQALANALLEKEVINYEDIEALI 747
>DICTYBASE|DDB_G0267492 [details] [associations]
symbol:DDB_G0267492 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0267492 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
EMBL:AAFI02000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 RefSeq:XP_647076.1
ProteinModelPortal:Q55GV8 SMR:Q55GV8 MEROPS:M41.A18
EnsemblProtists:DDB0189322 GeneID:8615880 KEGG:ddi:DDB_G0267492
OMA:RINENNQ Uniprot:Q55GV8
Length = 720
Score = 886 (316.9 bits), Expect = 9.6e-89, P = 9.6e-89
Identities = 198/452 (43%), Positives = 287/452 (63%)
Query: 207 PNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKA 266
PNT TF DV G +EAK + Q++V FL+ PEK+ +PKG+LLVGPPGTGKTLLAK+
Sbjct: 159 PNT--TFADVMGAEEAKGELQDLVDFLRNPEKYYRRNIVMPKGILLVGPPGTGKTLLAKS 216
Query: 267 IAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXX 326
+AGEA V F +++GSEF E FVGVGA RVR+LF A+ NSPC+VFIDEID+V
Sbjct: 217 LAGEARVSFITINGSEFEEAFVGVGAKRVRELFEAARKNSPCIVFIDEIDSVGGSRTKRV 276
Query: 327 XXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDI 386
N + LNQLL E+DGF G GV+V+AATN + LD+AL R GRFDR + V LPD
Sbjct: 277 ---NYHPSEALNQLLVELDGFDGREGVMVMAATNYQDSLDTALIRSGRFDRIIQVPLPDG 333
Query: 387 RGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKE 446
+ R+ I+ + +K + V+ + IA TPGFSGADL NL+N AA+ + IT+++
Sbjct: 334 KARKSIIDHYLKDKPIASHVNTTTIAQSTPGFSGADLFNLVNWAALETTKHNLPEITMEQ 393
Query: 447 IDDSIDRIVAGME--GTKMTDGKNKILVAYHEIGHAVCATLTPGHDPVQKVTLIPRGQAR 504
++++ + ++ G E M+D KI A+HE GHA+ A +TPG V K T++PRG A
Sbjct: 394 LENAKENLMMGKERHSLLMSDEARKIC-AFHEAGHALVAIMTPGARTVHKATIMPRGDAL 452
Query: 505 GLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQITQIARQM 564
GL L +E+ ++K+QL A++ +GGRAAEE+I G+ I+ GA+ D+Q+ T IA+ M
Sbjct: 453 GLVSMLEKEE-TFVTKKQLIAQMDVAMGGRAAEELILGKENISQGASSDIQKATSIAKAM 511
Query: 565 VTRYGMSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIESAYEVAKN 623
V+ YGMSE +G +QS + +S +L +D V+++++S+Y A
Sbjct: 512 VSNYGMSEKVG-----QIYIQSEKKL------SSAQREL---VDSEVKSLLDSSYIRATQ 557
Query: 624 HIRNNREAIDKLVDVLMEKETLSGDEFRAVLS 655
++ + + + L+E ETLS DE + +++
Sbjct: 558 LLKKYSKEHHLIANALLEYETLSLDEIKDIIA 589
>UNIPROTKB|Q9UQ90 [details] [associations]
symbol:SPG7 "Paraplegin" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0031966 "mitochondrial membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004222
"metalloendopeptidase activity" evidence=IDA] [GO:0005739
"mitochondrion" evidence=TAS] [GO:0051082 "unfolded protein
binding" evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0008233 "peptidase activity" evidence=TAS]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0007399 GO:GO:0031966 GO:GO:0046872
GO:GO:0008219 GO:GO:0051082 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
HOGENOM:HOG000217277 HOVERGEN:HBG050184 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 EMBL:Y16610 EMBL:AF080525
EMBL:AF080511 EMBL:AF080512 EMBL:AF080513 EMBL:AF080514
EMBL:AF080515 EMBL:AF080516 EMBL:AF080517 EMBL:AF080518
EMBL:AF080519 EMBL:AF080520 EMBL:AF080521 EMBL:AF080522
EMBL:AF080523 EMBL:AF080524 EMBL:BC007692 EMBL:BC035929
EMBL:BC036104 EMBL:BC110530 EMBL:BC110531 IPI:IPI00299010
IPI:IPI00398508 RefSeq:NP_003110.1 RefSeq:NP_955399.1
UniGene:Hs.185597 PDB:2QZ4 PDBsum:2QZ4 ProteinModelPortal:Q9UQ90
SMR:Q9UQ90 IntAct:Q9UQ90 STRING:Q9UQ90 MEROPS:M41.006
PhosphoSite:Q9UQ90 DMDM:116242796 PaxDb:Q9UQ90 PRIDE:Q9UQ90
DNASU:6687 Ensembl:ENST00000268704 Ensembl:ENST00000341316
GeneID:6687 KEGG:hsa:6687 UCSC:uc002fni.3 UCSC:uc002fnj.3 CTD:6687
GeneCards:GC16P089574 HGNC:HGNC:11237 MIM:602783 MIM:607259
neXtProt:NX_Q9UQ90 Orphanet:99013 PharmGKB:PA36067
InParanoid:Q9UQ90 KO:K09552 OMA:MMDHEAK OrthoDB:EOG4PG60F
PhylomeDB:Q9UQ90 ChiTaRS:SPG7 EvolutionaryTrace:Q9UQ90
GenomeRNAi:6687 NextBio:26057 ArrayExpress:Q9UQ90 Bgee:Q9UQ90
CleanEx:HS_SPG7 Genevestigator:Q9UQ90 GermOnline:ENSG00000197912
Uniprot:Q9UQ90
Length = 795
Score = 885 (316.6 bits), Expect = 1.2e-88, P = 1.2e-88
Identities = 190/451 (42%), Positives = 284/451 (62%)
Query: 210 GVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
GV+F DVAG+ EAK + +E V +L++PE+F +GAK+PKG LL+GPPG GKTLLAKA+A
Sbjct: 305 GVSFKDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVAT 364
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXX- 328
EA VPF +++G EF+E+ G+GA+RVR LF +A+A +PC+V+IDEIDAV
Sbjct: 365 EAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTTMSGF 424
Query: 329 XNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRG 388
N E EQTLNQLL EMDG VIV+A+TNR +ILD AL RPGR DR V + LP ++
Sbjct: 425 SNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDGALMRPGRLDRHVFIDLPTLQE 484
Query: 389 REQILKVHSNNKKLDKDVSL--SVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKE 446
R +I + H + KL + + +A TPGFSGAD+AN+ NEAA+ A R G ++
Sbjct: 485 RREIFEQHLKSLKLTQSSTFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTLN 544
Query: 447 IDDSIDRIVAGM-EGTKMTDGKNKILVAYHEIGHAVCATLTPGHDPVQKVTLIPRGQAR- 504
+ +++R++AG + +K+ + + +VA+HE GHA+ + + V KV++ PR A
Sbjct: 545 FEYAVERVLAGTAKKSKILSKEEQKVVAFHESGHALVGWMLEHTEAVMKVSITPRTNAAL 604
Query: 505 GLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQITQIARQM 564
G LP D L +K+QLF R+ LGGRA+E + F E +T+GA DL+++T+IA M
Sbjct: 605 GFAQMLPR-DQHLFTKEQLFERMCMALGGRASEALSFNE--VTSGAQDDLRKVTRIAYSM 661
Query: 565 VTRYGMSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIESAYEVAKN 623
V ++GM+ IGP + P Q + + R S+ L +D R ++ AY +
Sbjct: 662 VKQFGMAPGIGPISF--PEAQEG---LMGIGRRPFSQGLQQMMDHEARLLVAKAYRHTEK 716
Query: 624 HIRNNREAIDKLVDVLMEKETLSGDEFRAVL 654
+++N + + L + L+EKE ++ ++ A++
Sbjct: 717 VLQDNLDKLQALANALLEKEVINYEDIEALI 747
>UNIPROTKB|E2R4F3 [details] [associations]
symbol:SPG7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0008089
GO:GO:0030163 GeneTree:ENSGT00530000063070 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 CTD:6687 KO:K09552 OMA:MMDHEAK
EMBL:AAEX03003953 EMBL:AAEX03003954 RefSeq:XP_546777.3
Ensembl:ENSCAFT00000031561 GeneID:489657 KEGG:cfa:489657
NextBio:20862809 Uniprot:E2R4F3
Length = 793
Score = 884 (316.2 bits), Expect = 1.6e-88, P = 1.6e-88
Identities = 190/451 (42%), Positives = 285/451 (63%)
Query: 210 GVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
GV+F DVAG+ EAK + +E V +L++PE+F +GAK+PKG LL+GPPG GKTLLAKA+A
Sbjct: 305 GVSFKDVAGMHEAKLEVKEFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVAT 364
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXX- 328
EA VPF +++G EF+E+ G+GA+RVR LF +A+A +PC+V+IDEIDAV
Sbjct: 365 EAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTTMSGF 424
Query: 329 XNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRG 388
N E EQTLNQLL EMDG VIV+A+TNR +ILD+AL RPGR DR V + LP ++
Sbjct: 425 SNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDNALLRPGRLDRHVFIDLPTLQE 484
Query: 389 REQILKVHSNNKKLDKDVSL--SVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKE 446
R +I + H + KL + S +A TPGFSGAD+AN+ NEAA+ A R G ++
Sbjct: 485 RREIFEHHLKSLKLTQASSFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTFN 544
Query: 447 IDDSIDRIVAGM-EGTKMTDGKNKILVAYHEIGHAVCATLTPGHDPVQKVTLIPRGQAR- 504
+ +++R++AG + +K+ + + +VA+HE GHA+ L + V KV++ PR A
Sbjct: 545 FEYAVERVIAGTAKKSKILSKEEQKVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAAL 604
Query: 505 GLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQITQIARQM 564
G LP D L +K+QLF R+ LGGR +E + F + +T+GA DL+++T+IA M
Sbjct: 605 GFAQMLPR-DQHLFTKEQLFERMCMALGGRVSETISFNK--VTSGAQDDLRKVTRIAYSM 661
Query: 565 VTRYGMS-EIGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIESAYEVAKN 623
V ++GM+ IGP + P VQ + + R S+ L +D + ++ AY +
Sbjct: 662 VKQFGMAPSIGPISF--PEVQEG---LTGIGRRPFSQGLQQMMDHEAKLLVAKAYRHTEK 716
Query: 624 HIRNNREAIDKLVDVLMEKETLSGDEFRAVL 654
+++N + + L + L+EKE ++ ++ A++
Sbjct: 717 VLQDNLDKLQALANALLEKEVINYEDIEALI 747
>ZFIN|ZDB-GENE-030131-5391 [details] [associations]
symbol:spg7 "spastic paraplegia 7" species:7955
"Danio rerio" [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 SMART:SM00382
ZFIN:ZDB-GENE-030131-5391 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:6687 KO:K09552 OMA:MMDHEAK EMBL:AL954648 EMBL:BX470191
IPI:IPI00483001 RefSeq:XP_001923118.1 UniGene:Dr.105782
Ensembl:ENSDART00000098438 GeneID:794740 KEGG:dre:794740
NextBio:20931970 Uniprot:E7F2S4
Length = 788
Score = 882 (315.5 bits), Expect = 2.5e-88, P = 2.5e-88
Identities = 194/463 (41%), Positives = 291/463 (62%)
Query: 201 AKFEM---EPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPG 257
AKF + + GV+F DVAG+ EAK + +E V +L+ P+++ +GAK+PKG LL+GPPG
Sbjct: 284 AKFTIVDGKSGKGVSFKDVAGMREAKMEVKEFVDYLKNPDRYLQLGAKVPKGSLLLGPPG 343
Query: 258 TGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDA 317
GKTLLAKA+A EA VPF +++GSEF+E+ G+GA+RVR LF +A+A +PC+V+IDEIDA
Sbjct: 344 CGKTLLAKAVATEAQVPFLAMAGSEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDA 403
Query: 318 VXXXXXXXXXX-XNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFD 376
V N E EQTLNQLL EMDG VIV+A+TNR +ILD+AL RPGR D
Sbjct: 404 VGKKRSTNMSGFSNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDNALMRPGRLD 463
Query: 377 RQVSVGLPDIRGREQILKVHSNNKKLDKDVSL-SV-IATRTPGFSGADLANLMNEAAILA 434
R + + LP ++ R++I + H KL + S+ +A TPGFSGAD+AN+ NEAA+ A
Sbjct: 464 RHIFIDLPTLQERKEIFEQHLKILKLTQPADFYSLRLAELTPGFSGADIANICNEAALHA 523
Query: 435 GRRGKANITLKEIDDSIDRIVAG-MEGTKMTDGKNKILVAYHEIGHAVCATLTPGHDPVQ 493
R G +I + +++R++AG ++ +K+ + + +VA+HE GHA+ L + V
Sbjct: 524 AREGFKSIDTFSFEYAVERVIAGSVKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVM 583
Query: 494 KVTLIPRGQAR-GLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAG 552
KV++ PR A G LP D L +K+QLF R+ LGGRA+E + F + +TTGA
Sbjct: 584 KVSIAPRTNAALGFAQILPR-DQFLFTKEQLFERMCMALGGRASEAITFNK--VTTGAQD 640
Query: 553 DLQQITQIARQMVTRYGMSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVR 611
DL+++T++A MV +YGM + +G + D QS + R S+ L +D +
Sbjct: 641 DLRKVTRVAYSMVKQYGMVDSVGQVSFPDSENQSG------IGRRPFSQGLQQQMDLEAK 694
Query: 612 NIIESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVL 654
+I AY + + +NR+ + L + L+E+E ++ ++ A+L
Sbjct: 695 MLIAKAYRHTEKLLLDNRDKLILLANALLEREVVNYNDIEALL 737
>UNIPROTKB|F1NXP0 [details] [associations]
symbol:SPG7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=IEA] [GO:0008089 "anterograde axon cargo
transport" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0008089
GO:GO:0030163 GeneTree:ENSGT00530000063070 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 OMA:MMDHEAK EMBL:AADN02054132
IPI:IPI00601320 Ensembl:ENSGALT00000010016 Uniprot:F1NXP0
Length = 768
Score = 874 (312.7 bits), Expect = 1.8e-87, P = 1.8e-87
Identities = 189/451 (41%), Positives = 280/451 (62%)
Query: 210 GVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
G+ F DVAG+ EAK + +E V +L+ P+++ +GAK+PKG LL+GPPG GKTLLAKA+A
Sbjct: 278 GIGFKDVAGMHEAKMEVKEFVDYLKNPDRYLQLGAKVPKGALLLGPPGCGKTLLAKAVAT 337
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXX- 328
EA VPF +++GSEF+E+ G+GA+RVR LF +A+A +PC+V+IDEIDAV
Sbjct: 338 EAQVPFLAMAGSEFVEVIGGLGAARVRSLFREAQARAPCIVYIDEIDAVGKKRSTNVSGF 397
Query: 329 XNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRG 388
N E EQTLNQLL EMDG VIV+A+TNR ++LD+AL RPGR DR + + LP ++
Sbjct: 398 ANAEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADVLDNALMRPGRLDRHIFIDLPTLQE 457
Query: 389 REQILKVHSNNKKLDKDVSL--SVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKE 446
R +I + H KL +D S +A TPGFSGAD+AN+ NEAA+ A R G +I
Sbjct: 458 RREIFEQHLKGLKLIQDASFYSQHLAELTPGFSGADIANICNEAALHAAREGHKSIDTFN 517
Query: 447 IDDSIDRIVAGM-EGTKMTDGKNKILVAYHEIGHAVCATLTPGHDPVQKVTLIPRGQAR- 504
+ +++R++AG + K+ + + +VA+HE GHA+ L + V KV++ PR A
Sbjct: 518 FEYAVERVIAGTAKRNKILSPEERKVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAAL 577
Query: 505 GLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQITQIARQM 564
G LP E L +K+QL R+ LGGR +E + F + +TTGA DL+++T+IA M
Sbjct: 578 GFAQILPREQ-YLFTKEQLLERMCMALGGRVSEAITFNK--VTTGAQDDLKRVTKIAYSM 634
Query: 565 VTRYGM-SEIGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIESAYEVAKN 623
V +YGM IG + P +S+ + R S+ L +D + ++ AY +
Sbjct: 635 VKQYGMVPSIGQISF--PDGESTVGI----GRRPFSQGLQQMMDHEAKVLVAQAYRRTEK 688
Query: 624 HIRNNREAIDKLVDVLMEKETLSGDEFRAVL 654
+ +NR+ + L + L+EKE ++ D+ A++
Sbjct: 689 LLLDNRDKLQTLSNALLEKEVINYDDIEALI 719
>WB|WBGene00021425 [details] [associations]
symbol:ppgn-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
KO:K09552 EMBL:FO080872 EMBL:AB257343 RefSeq:NP_500191.3
UniGene:Cel.12073 ProteinModelPortal:G5EDB6 SMR:G5EDB6
MEROPS:M41.A12 EnsemblMetazoa:Y38F2AR.7.1
EnsemblMetazoa:Y38F2AR.7.2 GeneID:177021 KEGG:cel:CELE_Y38F2AR.7
CTD:177021 WormBase:Y38F2AR.7 OMA:DKISWSE NextBio:895012
Uniprot:G5EDB6
Length = 747
Score = 837 (299.7 bits), Expect = 1.5e-83, P = 1.5e-83
Identities = 189/477 (39%), Positives = 286/477 (59%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGE 270
+ F DVAG EAK + +E V +L+ P +F +GAK+P+G LL GPPG GKTLLAKA+A E
Sbjct: 282 IKFKDVAGCSEAKVEIREFVDYLKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAAE 341
Query: 271 AGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX- 329
+ VPF S++GSEF+E+ G+GASR+R LF +A++ +PC+++IDEIDA+
Sbjct: 342 STVPFISMNGSEFVEVIGGLGASRIRGLFKEARSRAPCIIYIDEIDAIGRKRSEGAGAGG 401
Query: 330 -----NDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLP 384
+ E EQTLNQLL EMDG +GV+V+A+TNR ++LD AL RPGRFDR +S+ LP
Sbjct: 402 GFGGGSGEEEQTLNQLLVEMDGMGSGNGVVVLASTNRADVLDKALLRPGRFDRHISIDLP 461
Query: 385 DIRGREQILKVHSNNKKLD---KDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKAN 441
+ R+ + +++ KLD ++ S +A TPGF+GAD+ N+ NE+AI A
Sbjct: 462 TVLERKDMFELYMRKIKLDHAPQEYSQR-LAALTPGFTGADIMNVCNESAIRAASNKCHV 520
Query: 442 ITLKEIDDSIDRIVAGMEG-TKMTDGKNKILVAYHEIGHAVCATLTPGHDPVQKVTLIPR 500
+T K+++ ++DR++AG E ++ + + +VAYHE GHA+ + D + KVT+IPR
Sbjct: 521 VTHKDMEYALDRVLAGSEKRSRSLVEEEREVVAYHEAGHALVGWMLEHTDALLKVTIIPR 580
Query: 501 GQAR-GLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQITQ 559
A G + P D L SK +LF R+ LGGR AE + FG A T+GA DLQ++T+
Sbjct: 581 TSAALGFAQYSPR-DKHLFSKDELFDRMCMMLGGRCAENLKFGRA--TSGAQDDLQKVTK 637
Query: 560 IARQMVTRYGMSEI-GPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIESAY 618
A V YGMS I GP + P+ + + S+K A D+ I+ A
Sbjct: 638 SAYAQVKLYGMSSIVGPLSF--PNTEGFQI-------KPYSKKFASTFDQEATLIVAKAN 688
Query: 619 EVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVLS--EFTDVSA-DQVDRTPIRE 672
E + I+NN + ++ + L+++E L+ ++ + ++ +F D D V+ +E
Sbjct: 689 EATTDLIKNNMDKLETIAQALLKREVLNYEDVKKLIGTPKFGDKHVIDMVENVLPKE 745
>RGD|727940 [details] [associations]
symbol:Spg7 "spastic paraplegia 7 homolog (human)" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA;ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA;ISO] [GO:0008089
"anterograde axon cargo transport" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0031966
"mitochondrial membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 SMART:SM00382 RGD:727940
GO:GO:0016021 GO:GO:0005524 GO:GO:0031966 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 GO:GO:0017111 HSSP:Q9WZ49 MEROPS:M41.006
CTD:6687 KO:K09552 EMBL:AY278739 IPI:IPI00327108 RefSeq:NP_852053.1
UniGene:Rn.16437 ProteinModelPortal:Q7TT47 SMR:Q7TT47 STRING:Q7TT47
PRIDE:Q7TT47 Ensembl:ENSRNOT00000047754 GeneID:353231
KEGG:rno:353231 UCSC:RGD:727940 NextBio:672619 ArrayExpress:Q7TT47
Genevestigator:Q7TT47 Uniprot:Q7TT47
Length = 744
Score = 561 (202.5 bits), Expect = 9.5e-80, Sum P(2) = 9.5e-80
Identities = 113/214 (52%), Positives = 149/214 (69%)
Query: 210 GVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
GV+F DVAG+ EAK + +E V +L++PE+F +GAK+PKG LL+GPPG GKTLLAKA+A
Sbjct: 305 GVSFQDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVAT 364
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXX- 328
EA VPF +++G EF+E+ G+GA+RVR LF +A+A +PC+V+IDEIDAV
Sbjct: 365 EAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTSMSGF 424
Query: 329 XNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRG 388
N E EQTLNQLL EMDG VIV+A+TNR ++LD+AL RPGR DR V + LP ++
Sbjct: 425 SNTEEEQTLNQLLVEMDGMGTADHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTLQE 484
Query: 389 REQILKVHSNNKKLDKDVSL--SVIATRTPGFSG 420
R +I + H KL + S +A TPGFSG
Sbjct: 485 RREIFEQHLKGLKLTQPSSFYSQRLAELTPGFSG 518
Score = 259 (96.2 bits), Expect = 9.5e-80, Sum P(2) = 9.5e-80
Identities = 68/207 (32%), Positives = 112/207 (54%)
Query: 454 IVAGMEGT----KMTDGKNKILVAYHEIGHAVCATLTPGHDPVQKVTLIPRGQAR-GLTW 508
+ G GT K+ + + +VA+HE GHA+ L + V KV++ PR A G +
Sbjct: 512 LTPGFSGTAKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQ 571
Query: 509 FLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQITQIARQMVTRY 568
LP D L +K+QLF R+ LGGRAAE + F + +T+GA DL+++T+IA MV ++
Sbjct: 572 MLPR-DQYLFTKEQLFERMCMALGGRAAEAISF--SRVTSGAQDDLRKVTRIAYSMVKQF 628
Query: 569 GMS-EIGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIESAYEVAKNHIRN 627
GM+ IGP + P Q V + R S+ L +D R ++ AY + + +
Sbjct: 629 GMAPSIGPVSF--PEAQEGLVG---IGRRPFSQGLQQMMDHEARLLVARAYRHTEKVLLD 683
Query: 628 NREAIDKLVDVLMEKETLSGDEFRAVL 654
N + + L + L+EKE ++ ++ A++
Sbjct: 684 NLDKLQALANALLEKEVINYEDIEALI 710
>UNIPROTKB|Q7TT47 [details] [associations]
symbol:Spg7 "Paraplegin" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 RGD:727940 GO:GO:0016021 GO:GO:0005524
GO:GO:0031966 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 eggNOG:COG0465 GeneTree:ENSGT00530000063070
HOGENOM:HOG000217277 HOVERGEN:HBG050184 GO:GO:0017111 HSSP:Q9WZ49
MEROPS:M41.006 CTD:6687 KO:K09552 EMBL:AY278739 IPI:IPI00327108
RefSeq:NP_852053.1 UniGene:Rn.16437 ProteinModelPortal:Q7TT47
SMR:Q7TT47 STRING:Q7TT47 PRIDE:Q7TT47 Ensembl:ENSRNOT00000047754
GeneID:353231 KEGG:rno:353231 UCSC:RGD:727940 NextBio:672619
ArrayExpress:Q7TT47 Genevestigator:Q7TT47 Uniprot:Q7TT47
Length = 744
Score = 561 (202.5 bits), Expect = 9.5e-80, Sum P(2) = 9.5e-80
Identities = 113/214 (52%), Positives = 149/214 (69%)
Query: 210 GVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
GV+F DVAG+ EAK + +E V +L++PE+F +GAK+PKG LL+GPPG GKTLLAKA+A
Sbjct: 305 GVSFQDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVAT 364
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXX- 328
EA VPF +++G EF+E+ G+GA+RVR LF +A+A +PC+V+IDEIDAV
Sbjct: 365 EAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTSMSGF 424
Query: 329 XNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRG 388
N E EQTLNQLL EMDG VIV+A+TNR ++LD+AL RPGR DR V + LP ++
Sbjct: 425 SNTEEEQTLNQLLVEMDGMGTADHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTLQE 484
Query: 389 REQILKVHSNNKKLDKDVSL--SVIATRTPGFSG 420
R +I + H KL + S +A TPGFSG
Sbjct: 485 RREIFEQHLKGLKLTQPSSFYSQRLAELTPGFSG 518
Score = 259 (96.2 bits), Expect = 9.5e-80, Sum P(2) = 9.5e-80
Identities = 68/207 (32%), Positives = 112/207 (54%)
Query: 454 IVAGMEGT----KMTDGKNKILVAYHEIGHAVCATLTPGHDPVQKVTLIPRGQAR-GLTW 508
+ G GT K+ + + +VA+HE GHA+ L + V KV++ PR A G +
Sbjct: 512 LTPGFSGTAKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQ 571
Query: 509 FLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQITQIARQMVTRY 568
LP D L +K+QLF R+ LGGRAAE + F + +T+GA DL+++T+IA MV ++
Sbjct: 572 MLPR-DQYLFTKEQLFERMCMALGGRAAEAISF--SRVTSGAQDDLRKVTRIAYSMVKQF 628
Query: 569 GMS-EIGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIESAYEVAKNHIRN 627
GM+ IGP + P Q V + R S+ L +D R ++ AY + + +
Sbjct: 629 GMAPSIGPVSF--PEAQEGLVG---IGRRPFSQGLQQMMDHEARLLVARAYRHTEKVLLD 683
Query: 628 NREAIDKLVDVLMEKETLSGDEFRAVL 654
N + + L + L+EKE ++ ++ A++
Sbjct: 684 NLDKLQALANALLEKEVINYEDIEALI 710
>TAIR|locus:2138146 [details] [associations]
symbol:FtsHi1 "FTSH inactive protease 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008237 "metallopeptidase
activity" evidence=ISS] [GO:0009658 "chloroplast organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0007020 "microtubule nucleation"
evidence=RCA] [GO:0010020 "chloroplast fission" evidence=IMP]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0051301 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
eggNOG:COG0465 GO:GO:0017111 GO:GO:0010020 EMBL:AC002343
EMBL:AL078468 EMBL:AL161560 HSSP:Q9LCZ4 IPI:IPI00537043 PIR:T08913
RefSeq:NP_567691.1 UniGene:At.3392 ProteinModelPortal:O22993
SMR:O22993 PaxDb:O22993 PRIDE:O22993 EnsemblPlants:AT4G23940.1
GeneID:828494 KEGG:ath:AT4G23940 TAIR:At4g23940
HOGENOM:HOG000029491 InParanoid:O22993 OMA:QMAGSEF PhylomeDB:O22993
ProtClustDB:CLSN2689578 ArrayExpress:O22993 Genevestigator:O22993
Uniprot:O22993
Length = 946
Score = 760 (272.6 bits), Expect = 2.1e-75, P = 2.1e-75
Identities = 188/487 (38%), Positives = 279/487 (57%)
Query: 198 RSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPG 257
+SKA+ ++ +TGV F DVAG+DEA + QE+V++L+ P+ F +G K P GVLL GPPG
Sbjct: 414 QSKAEARVDGSTGVKFADVAGIDEAVDELQELVKYLKNPDLFDKMGIKPPHGVLLEGPPG 473
Query: 258 TGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDA 317
GKTL+AKAIAGEAGVPF+ ++GSEF+E+ VGVG++R+RDLF +AK N P ++FIDEIDA
Sbjct: 474 CGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDA 533
Query: 318 VXXXXXXXXXXXND--------EREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSAL 369
+ +D ERE TLNQLL E+DGF GVI + ATNR ++LD AL
Sbjct: 534 LATRRQGIFKENSDQLYNAATQERETTLNQLLIELDGFDTGKGVIFLGATNRRDLLDPAL 593
Query: 370 HRPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNE 429
RPGRFDR++ V P+ +GR ILK+H++ K+ V LS A+ PG+SGA LA L+ E
Sbjct: 594 LRPGRFDRKIRVRPPNAKGRLDILKIHASKVKMSDSVDLSSYASNLPGWSGAKLAQLVQE 653
Query: 430 AAILAGRRGKANITLKEIDDSIDRIVAGMEGTKMTDG-KNKILVAYHEIGHAVCATLTPG 488
AA++A R+ +I ++DD++DR+ G + G + + A E+G A+ + L
Sbjct: 654 AALVAVRKTHNSILQSDMDDAVDRLTVGPTRIGLELGHQGQCRRATTEVGVAITSHLLLR 713
Query: 489 HDPVQ-----KVTLIPRGQARGLTWF--LPEEDPALISKQQLFARIVGGLGGRAAEEVIF 541
++ + +V++IPRGQ F L +E QL R+ LGGRAAEEVI+
Sbjct: 714 YENAKIERCDRVSIIPRGQTLSQVVFHRLDDESYMFGRLPQLLHRLQVLLGGRAAEEVIY 773
Query: 542 GEAEITTGAAGD-LQQITQIARQMVTRYGMSEIGPWTLIDPSVQSSDVVMRMLARNSMSE 600
G T+ A+ D L + +AR+++T + + P + + R
Sbjct: 774 GSD--TSKASVDYLSDASWLARKILTIWNLEN--PMVIHGEPPPWRKRPQFVGPRLDFEG 829
Query: 601 KLADDIDKTVRNI-IESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVLSEFTD 659
L DD D + EVA + +K V +L + +T + +L++ +
Sbjct: 830 SLYDDYDLVEPPVNFNMDDEVAHRSEELISQMYNKTVSLLRQNQTALLKTVKVLLNQ-KE 888
Query: 660 VSADQVD 666
+S + +D
Sbjct: 889 ISGEAID 895
Score = 127 (49.8 bits), Expect = 0.00028, P = 0.00028
Identities = 48/180 (26%), Positives = 83/180 (46%)
Query: 494 KVTLIPRGQARGLTWF--LPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAA 551
+V++IPRGQ F L +E QL R+ LGGRAAEEVI+G T+ A+
Sbjct: 724 RVSIIPRGQTLSQVVFHRLDDESYMFGRLPQLLHRLQVLLGGRAAEEVIYGSD--TSKAS 781
Query: 552 GD-LQQITQIARQMVTRYGMS-------EIGPWT----LIDPSVQSSDVVMRM--LARNS 597
D L + +AR+++T + + E PW + P + + L
Sbjct: 782 VDYLSDASWLARKILTIWNLENPMVIHGEPPPWRKRPQFVGPRLDFEGSLYDDYDLVEPP 841
Query: 598 MSEKLADDIDKTVRNIIESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVLSEF 657
++ + D++ +I Y + +R N+ A+ K V VL+ ++ +SG+ +L +
Sbjct: 842 VNFNMDDEVAHRSEELISQMYNKTVSLLRQNQTALLKTVKVLLNQKEISGEAIDFILDHY 901
>TAIR|locus:2076929 [details] [associations]
symbol:AT3G02450 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR011546 Pfam:PF00004 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AC021640
EMBL:CP002686 GO:GO:0051301 GO:GO:0008270 GO:GO:0009941
GO:GO:0004222 GO:GO:0017111 HSSP:Q9LCZ4 EMBL:AY062811 EMBL:BT008384
IPI:IPI00524458 RefSeq:NP_186894.1 UniGene:At.27477
ProteinModelPortal:Q9M895 SMR:Q9M895 STRING:Q9M895 PRIDE:Q9M895
EnsemblPlants:AT3G02450.1 GeneID:821139 KEGG:ath:AT3G02450
InParanoid:Q9M895 OMA:SRRIYYN ProtClustDB:CLSN2685201
Genevestigator:Q9M895 Uniprot:Q9M895
Length = 622
Score = 730 (262.0 bits), Expect = 8.5e-75, Sum P(2) = 8.5e-75
Identities = 151/262 (57%), Positives = 190/262 (72%)
Query: 199 SKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGT 258
S AK N V FDDV GVD AK + EIV LQ + +GA++P+GVLLVGPPGT
Sbjct: 319 SPAKKRRSKNPTVGFDDVEGVDSAKDELVEIVSCLQGSINYKKLGARLPRGVLLVGPPGT 378
Query: 259 GKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAV 318
GKTLLA+A+AGEAGVPFFS+S SEF+E+FVG GA+R+RDLFN A+ NSP ++FIDE+DAV
Sbjct: 379 GKTLLARAVAGEAGVPFFSVSASEFVELFVGRGAARIRDLFNAARKNSPSIIFIDELDAV 438
Query: 319 XXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQ 378
NDER+QTLNQLLTEMDGF ++ VIVIAATNRPE LDSAL RPGRF R+
Sbjct: 439 GGKRGRSF---NDERDQTLNQLLTEMDGFESDTKVIVIAATNRPEALDSALCRPGRFSRK 495
Query: 379 VSVGLPDIRGREQILKVHSNNKKLDKDVSL--SVIATRTPGFSGADLANLMNEAAILAGR 436
V V PD GR +IL +H + L++D L ++A+ TPGF GADLAN++NEAA+LA R
Sbjct: 496 VLVAEPDQEGRRKILAIHLRDVPLEEDAFLICDLVASLTPGFVGADLANIVNEAALLAAR 555
Query: 437 RGKANITLKEIDDSIDRIVAGM 458
RG + ++I ++I+R G+
Sbjct: 556 RGGEAVAREDIMEAIERAKFGI 577
Score = 43 (20.2 bits), Expect = 8.5e-75, Sum P(2) = 8.5e-75
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 86 YSRFLQYLDEGSVKKVDLFENGN 108
YS F+ L GSV KV L E G+
Sbjct: 177 YSDFVTNLRGGSVSKV-LLEEGS 198
>TAIR|locus:2094892 [details] [associations]
symbol:EMB2083 "embryo defective 2083" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0000023 "maltose metabolic process"
evidence=RCA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AB023046
eggNOG:COG0465 GO:GO:0017111 IPI:IPI00526963 RefSeq:NP_566541.1
UniGene:At.38918 ProteinModelPortal:A8MPR5 SMR:A8MPR5 STRING:A8MPR5
PaxDb:A8MPR5 PRIDE:A8MPR5 EnsemblPlants:AT3G16290.1 GeneID:820876
KEGG:ath:AT3G16290 TAIR:At3g16290 HOGENOM:HOG000015086
InParanoid:A8MPR5 OMA:FFTHGEM PhylomeDB:A8MPR5
ProtClustDB:CLSN2688442 Genevestigator:A8MPR5 Uniprot:A8MPR5
Length = 876
Score = 701 (251.8 bits), Expect = 1.2e-71, Sum P(2) = 1.2e-71
Identities = 177/456 (38%), Positives = 258/456 (56%)
Query: 205 MEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLA 264
+E V F DVAG+ + + + +EIV+F E + G KIP G+LL GPPG GKTLLA
Sbjct: 401 LERGVDVKFTDVAGLGKIRLELEEIVKFFTHGEMYRRRGVKIPGGILLCGPPGVGKTLLA 460
Query: 265 KAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXX 324
KA+AGEAGV FFS+S S+F+E++VGVGASRVR L+ +A+ N+P +VFIDE+DAV
Sbjct: 461 KAVAGEAGVNFFSISASQFVEIYVGVGASRVRALYQEARENAPSVVFIDELDAVGRERGL 520
Query: 325 XXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLP 384
ER+ TLNQLL +DGF G VI IA+TNRP+ILD AL RPGRFDR++ + P
Sbjct: 521 IKGSGGQERDATLNQLLVSLDGFEGRGEVITIASTNRPDILDPALVRPGRFDRKIFIPKP 580
Query: 385 DIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITL 444
+ GR +IL+VH+ K + +D+ +A+ T G GA+LAN++ AAI R G+ +T
Sbjct: 581 GLIGRMEILQVHARKKPMAEDLDYMAVASMTDGMVGAELANIVEIAAINMMRDGRTELTT 640
Query: 445 KEIDDSIDRIVAGMEGTKMTDGKNKIL-----VAYHEIGHAVCATLTPGHDPVQKVTLIP 499
DD + A +E M D K++ L VA +E AV A P ++ +T+ P
Sbjct: 641 ---DDLLQ--AAQIEERGMLDRKDRSLETWRQVAINEAAMAVVAVNFPDMKNIEFLTINP 695
Query: 500 RGQARGLTWFLPEED-----PALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDL 554
R R L + + D ++S+Q + I L RAA+E+ +GE +++T A
Sbjct: 696 RA-GRELGYVRVKMDHIKFKEGMLSRQSILDHITVQLAPRAADELWYGEDQLSTIWAETS 754
Query: 555 QQITQIARQMVTRYGMSEIGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNII 614
AR +V G+S+ + + V R+ +DID I+
Sbjct: 755 DNARSAARSLVLG-GLSDK------HHGLNNFWVADRI-----------NDIDVEALRIL 796
Query: 615 ESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDEF 650
YE AK + NR +D++V+ L++K++L+ EF
Sbjct: 797 NMCYERAKEILGRNRTLMDEVVEKLVQKKSLTKQEF 832
Score = 42 (19.8 bits), Expect = 1.2e-71, Sum P(2) = 1.2e-71
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 69 KSTEPESPIEYTSNRMTYSRFLQYLDEGSVKKV 101
K+ + P+ SNR+ Y+ L EG +K V
Sbjct: 103 KAWSKDLPV--VSNRIPYTDILSLKAEGKLKHV 133
>TIGR_CMR|CJE_1085 [details] [associations]
symbol:CJE_1085 "cell division protein FtsH, putative"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0051301 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG0465 GO:GO:0017111 HOGENOM:HOG000217276 KO:K01417
RefSeq:YP_179078.1 ProteinModelPortal:Q5HUF7 SMR:Q5HUF7
STRING:Q5HUF7 GeneID:3231594 KEGG:cjr:CJE1085 PATRIC:20043979
OMA:HRSDERE ProtClustDB:CLSK2395802
BioCyc:CJEJ195099:GJC0-1111-MONOMER Uniprot:Q5HUF7
Length = 538
Score = 688 (247.2 bits), Expect = 6.8e-71, Sum P(2) = 6.8e-71
Identities = 156/337 (46%), Positives = 220/337 (65%)
Query: 209 TGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIA 268
+ +TF+DVAGVDE K + E+V FLQ P+K+ G K+PKGVL+VGPPG GKTL+AKA+A
Sbjct: 147 SNITFNDVAGVDEVKMELSELVDFLQNPKKYKEFGVKMPKGVLMVGPPGVGKTLIAKAVA 206
Query: 269 GEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXX 328
GEAGVPFF SGS F+E++VG+GA RVR+LF+KAK +P +VFIDEIDAV
Sbjct: 207 GEAGVPFFYQSGSSFVEIYVGMGAKRVRELFSKAKMMAPSIVFIDEIDAVGKARGEMS-- 264
Query: 329 XNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRG 388
N ER+ TLNQLLT+MDGF NSGVIVIAATN+ E++D AL R GRFDR++ + LPD +
Sbjct: 265 -NVERDSTLNQLLTQMDGFEDNSGVIVIAATNKIELMDPALLRSGRFDRRIFLSLPDFKD 323
Query: 389 REQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEID 448
R +IL+++ +K + +++L+ IA + GFSGA L L+NEAAI A RR A + +
Sbjct: 324 RLKILEIYMKDK--NNNINLNKIAKASVGFSGAGLETLVNEAAINALRRNSALVEESDFY 381
Query: 449 DSIDRIVAGMEGTKMTDGKNKILVAYHEIGHAVCAT-LTPGHDPVQKVTLIPRGQARGLT 507
+++++ G + + + K + A ++ A+ A L G + K+TLI + R
Sbjct: 382 AVLNKVLLGKKKILSFNNEEKKIQATYQAAKALSAYYLDIGFE---KITLI---EDR--- 432
Query: 508 WFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEA 544
E + + SK +L RI L G A ++I+ E+
Sbjct: 433 --FKEYEHNIRSKSELINRIKVYLAGSRAMKLIYNES 467
Score = 48 (22.0 bits), Expect = 6.8e-71, Sum P(2) = 6.8e-71
Identities = 11/43 (25%), Positives = 26/43 (60%)
Query: 612 NIIESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVL 654
N+ E E+ + + + ++ I KL ++L+EKE + D+ + ++
Sbjct: 495 NLSEQKKEMDE-FLNSMKDKILKLSELLLEKEKIEYDDVKDIM 536
>TAIR|locus:2174819 [details] [associations]
symbol:EMB3144 "EMBRYO DEFECTIVE 3144" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006508
"proteolysis" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006399 "tRNA metabolic process" evidence=RCA]
[GO:0009658 "chloroplast organization" evidence=RCA] [GO:0016556
"mRNA modification" evidence=RCA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 GO:GO:0009790
GO:GO:0017111 IPI:IPI00527762 RefSeq:NP_201263.2 UniGene:At.28951
ProteinModelPortal:F4KF14 SMR:F4KF14 PRIDE:F4KF14
EnsemblPlants:AT5G64580.1 GeneID:836579 KEGG:ath:AT5G64580
OMA:LCWISAK Uniprot:F4KF14
Length = 855
Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
Identities = 182/488 (37%), Positives = 269/488 (55%)
Query: 196 LGRSKAKF-EMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVG 254
LG+S+AKF E TGVTFDD AG + K++ QEIV+ L+ E+F G PKGVLL G
Sbjct: 297 LGKSRAKFISAEEKTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHG 356
Query: 255 PPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDE 314
PPGTGKTLLAKAIAGEAG+PFF+ +G++F+EMFVGV ASRV+DLF +++ +P ++FIDE
Sbjct: 357 PPGTGKTLLAKAIAGEAGLPFFAANGTDFVEMFVGVAASRVKDLFASSRSYAPSIIFIDE 416
Query: 315 IDAVXXXXXXXXXXXND-EREQTLNQLLTEMDGF-TGNSGVIVIAATNRPEILDSALHRP 372
IDA+ EREQ L Q+LTEMDGF S V+VI ATNR +ILD AL R
Sbjct: 417 IDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVTTSQVLVIGATNRLDILDPALLRK 476
Query: 373 GRFDRQVSVGLPDIRGREQILKVHSNNKKL----DKDVSLSVIATRTPGFSGADLANLMN 428
GRFD+ + VGLP GR ILKVH+ NK +K+ L +A T F+GA+L N++N
Sbjct: 477 GRFDKIIRVGLPSKDGRLAILKVHARNKFFRSEDEKEELLQEVAENTEDFTGAELQNVLN 536
Query: 429 EAAILAGRRGKANITLKEIDDSIDR----IVAGMEGTKMTDGKNKILVAYHEIGHAVCAT 484
EA IL R+ I +E+ +++ R G E + + K+ +AY E AV A
Sbjct: 537 EAGILTARKDLDYIGREELLEALKRQKGTFETGQEDSTEVPEELKLRLAYREAAVAVLAC 596
Query: 485 LTPG-HDPVQKVTLIPRGQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGE 543
P + P+ + T I +++ + K I+ R EE +FG
Sbjct: 597 YLPDQYRPISE-TDINSIRSQPNMRYSETSGRVFARKSDYVNSIIRACAPRVVEEEMFGI 655
Query: 544 AEITTGAAGDLQQITQIARQMVTRYGMSEIGPWTLIDPSVQSSDVVMRMLARNSMSEKLA 603
+ +A + +Q A ++ + GM+ G + D+V ++ + E L
Sbjct: 656 ENLCWISAKSTLEASQRAEFLILQTGMTAFGKAYYRN----QRDLVPNLVPK---LEALR 708
Query: 604 DDIDKTVRNIIESAYEVAKNHIRNNREAIDKLVDVLMEKETLSGDEFRAVLSEFTDVSAD 663
D+ +R +E + + + + A++++ DVL+EK + DE + + +A
Sbjct: 709 DEY---MRFAVEKCSSILQEY----QSALEEITDVLLEKGEIKADEIWNIYN-----TAP 756
Query: 664 QVDRTPIR 671
++ + P+R
Sbjct: 757 RIPQKPVR 764
>TIGR_CMR|CPS_1798 [details] [associations]
symbol:CPS_1798 "ATP-dependent peptidase, M41 family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
InterPro:IPR000642 InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR013093
Pfam:PF00004 Pfam:PF01434 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0006508
GO:GO:0004222 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0017111
eggNOG:COG0542 RefSeq:YP_268529.1 ProteinModelPortal:Q484I6
STRING:Q484I6 GeneID:3520574 KEGG:cps:CPS_1798 PATRIC:21466749
HOGENOM:HOG000133952 ProtClustDB:CLSK741075
BioCyc:CPSY167879:GI48-1868-MONOMER Uniprot:Q484I6
Length = 1284
Score = 608 (219.1 bits), Expect = 3.8e-58, P = 3.8e-58
Identities = 146/446 (32%), Positives = 241/446 (54%)
Query: 212 TFDDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEA 271
+ DDV G++ AK+ E+V +L+ PEK G KIP G L GPPGTGKTLLAKA+AGE
Sbjct: 849 SLDDVIGLERAKRRLIEVVSWLKAPEKLLNFGIKIPTGFLFSGPPGTGKTLLAKAVAGEC 908
Query: 272 GVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXND 331
+PFFS++ SE G ++ LF A+ +P ++FIDEIDA+ +
Sbjct: 909 ELPFFSVAASELSTPHSGGTTENIKQLFATARKYAPSIIFIDEIDAIAAQRTDNSDGSSR 968
Query: 332 EREQTLNQLLTEMDGFT-GNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGRE 390
++ T+N LLTEMDGF+ V V+AATN P++LDSA+ RPGRFD + LP+ R
Sbjct: 969 DKNLTVNALLTEMDGFSIAEVPVFVMAATNHPQLLDSAITRPGRFDETIYCDLPNKNARL 1028
Query: 391 QILKVHSNNKKLD-KDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDD 449
K ++ KL+ ++ L + + G S A++ ++ E+ A + +T + I
Sbjct: 1029 IFFKRFASKHKLNWQETELQQLVSSAQGMSSAEIDQVLRESIYQAVGENQ-QLTTEHIKQ 1087
Query: 450 SIDRIVAGMEGTKMTDG-KNKILVAYHEIGHAVCATLTPGHDPVQKVTLIPRGQARGLTW 508
++ RIV G + G + K AYHE H + L P+ +T+ PR QA G
Sbjct: 1088 TMIRIVYGAPSDHIFLGAEEKRRTAYHEAAHLLAYKLLFPKQPIDFITIEPRNQALGFVA 1147
Query: 509 FLPEEDPALISKQQLFARIVGGLGGRAAEEVIFGEAE-ITTGAAGDLQQITQIARQMVTR 567
E+ SK+++ ++ L GR AE++ G+ E ++TGA+ D+++ TQ+A +
Sbjct: 1148 TRASEEYESYSKRRVMHKLQVLLAGRVAEKLCTGDCEEVSTGASNDIEKATQLAMHAIYE 1207
Query: 568 YGMSEIGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIESAYEVAKNHIRN 627
G I+P+V V + ML + S+ LA+ + V+ ++ + + + +++
Sbjct: 1208 GG---------IEPTV--GPVNIAMLTKFEESDLLAN-AQQAVKQWLDQSEQQVEQLLKD 1255
Query: 628 NREAIDKLVDVLMEKETLSGDEFRAV 653
+ + + + + L++KE+L G+E +
Sbjct: 1256 HYQQLTLVAETLLDKESLLGEEINLI 1281
>TIGR_CMR|CPS_1795 [details] [associations]
symbol:CPS_1795 "ATP-dependent peptidase, M41 family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
InterPro:IPR000642 InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR013093
Pfam:PF00004 Pfam:PF01434 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0006508
GO:GO:0004222 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0017111
eggNOG:COG0542 HOGENOM:HOG000133952 ProtClustDB:CLSK741075
RefSeq:YP_268526.1 ProteinModelPortal:Q484I9 STRING:Q484I9
GeneID:3521104 KEGG:cps:CPS_1795 PATRIC:21466745
BioCyc:CPSY167879:GI48-1865-MONOMER Uniprot:Q484I9
Length = 1301
Score = 594 (214.2 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 148/445 (33%), Positives = 235/445 (52%)
Query: 214 DDVAGVDEAKQDFQEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGV 273
DDV G+ AK +++++++ P+K KIP G L GPPGTGKT LAKA+AGE G+
Sbjct: 868 DDVIGLQRAKNRLLDVIEWMKFPDKLQNFDVKIPTGFLFAGPPGTGKTFLAKAVAGECGL 927
Query: 274 PFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXNDER 333
PFFS+S SE +G + ++ LF+ A+ +P +VFIDEIDA+ + ER
Sbjct: 928 PFFSVSASELSSTIIGGSSEKIMALFSVARKYAPSIVFIDEIDAIASQRSEDSQGNSRER 987
Query: 334 EQTLNQLLTEMDGFTGN-SGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGREQI 392
+N LLTEMDGF+ + S V V+AATN P++LD A+ RPGRFD + LP+ R
Sbjct: 988 NAIVNTLLTEMDGFSSSESPVFVMAATNYPQLLDKAILRPGRFDETIFCDLPNSEARTIF 1047
Query: 393 LKVHSNNKKLDKDVS-LSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDSI 451
+ + + L S L+ + + + G S A++ ++ EA A K +T++ I +I
Sbjct: 1048 FEKFAQKQNLQWQQSDLTALVSSSQGMSSAEIDQVLREAIYQAVGTEKP-LTIEHIKQTI 1106
Query: 452 DRIVAGMEGTKMTDGKN-KILVAYHEIGHAVCATLTPGHDPVQKVTLIPRGQARGLTWFL 510
R+V G + GK K A+HE H + L + + T+ PR Q+ G
Sbjct: 1107 VRVVYGSPSENIKLGKEEKRRTAFHEAAHLLTYKLLFPNQIIDFATIEPRNQSLGFVATR 1166
Query: 511 PEEDPALISKQQLFARIVGGLGGRAAEEVIFGEA-EITTGAAGDLQQITQIARQMVTRYG 569
E+ SK ++ ++ L GR AE++ A EI+TGA+ D+++ TQ+A + G
Sbjct: 1167 ASEEYESYSKTRVMNKLQVLLAGRVAEKLCTNNADEISTGASNDIEKATQLAMHAIYDGG 1226
Query: 570 MSE-IGPWTLIDPSVQSSDVVMRMLARNSMSEKLADDIDKTVRNIIESAYEVAKNHIRNN 628
+ E +GP V + +L + SE LA K V+ + +A + + + +N
Sbjct: 1227 IEESVGP------------VNVGILTKFEESELLAK-AQKAVQQWLITAEQSVEKLLNDN 1273
Query: 629 REAIDKLVDVLMEKETLSGDEFRAV 653
++ + + L+EKE+L DE +
Sbjct: 1274 CHQLELVANTLLEKESLLSDEINTL 1298
>TAIR|locus:2206380 [details] [associations]
symbol:FTSH12 "FTSH protease 12" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS;IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0009536 "plastid" evidence=IDA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009658 "chloroplast
organization" evidence=RCA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 HSSP:Q01853
eggNOG:COG0465 GO:GO:0009535 EMBL:AC007202 GO:GO:0004176 KO:K03798
EMBL:AY035166 IPI:IPI00518515 PIR:A96827 RefSeq:NP_565212.1
UniGene:At.48395 UniGene:At.66914 ProteinModelPortal:Q9SAJ3
SMR:Q9SAJ3 STRING:Q9SAJ3 MEROPS:M41.A06 PaxDb:Q9SAJ3 PRIDE:Q9SAJ3
EnsemblPlants:AT1G79560.1 GeneID:844294 KEGG:ath:AT1G79560
GeneFarm:1828 TAIR:At1g79560 HOGENOM:HOG000090030 InParanoid:Q9SAJ3
OMA:QAVIFIC PhylomeDB:Q9SAJ3 ProtClustDB:CLSN2689328
Genevestigator:Q9SAJ3 Uniprot:Q9SAJ3
Length = 1008
Score = 556 (200.8 bits), Expect = 2.7e-54, Sum P(2) = 2.7e-54
Identities = 138/372 (37%), Positives = 207/372 (55%)
Query: 228 EIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMF 287
E++ ++ P ++ +GVLL GPPGTGKTL A+ +A E+G+PF SG+EF +
Sbjct: 507 ELMIYMGNPMQYYEKDVAFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSE 566
Query: 288 VGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXNDEREQTLNQL-----LT 342
GA+++ ++F+ A+ N+P VF+DEIDA+ E + QL T
Sbjct: 567 KS-GAAKINEMFSIARRNAPAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGEKEKT 625
Query: 343 EMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGREQILKVHSNNKKL 402
+D F+ VI I ATNRP+ LD R GR DR++ +GLPD + R QI VHS K L
Sbjct: 626 GIDRFSLRQAVIFICATNRPDELDLEFVRSGRIDRRLYIGLPDAKQRVQIFGVHSAGKNL 685
Query: 403 DKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDSIDR-IVAGMEGT 461
+D+ + RT GFSGAD+ NL+NEAAI++ R+G++ I ++I D +D+ ++ GM G
Sbjct: 686 AEDIDFGKLVFRTVGFSGADIRNLVNEAAIMSVRKGRSYIYQQDIVDVLDKQLLEGM-GV 744
Query: 462 KMTDGKN-----------KILVAYHEIGHAVCATLTPGHDPVQKVTLIPRGQARGLTWFL 510
+T+ + K L+A HE GH V A L P D L+P G+ ++ F
Sbjct: 745 LLTEEEQQKCEQSVSYEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAVSVFY 804
Query: 511 PEED---PALISKQQLFARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQITQIARQMVTR 567
P ED + + ++V GGR AE V+FG+ +T G DL++IT+IAR+MV
Sbjct: 805 PREDMVDQGYTTFGYMKMQMVVAHGGRCAERVVFGD-NVTDGGKDDLEKITKIAREMVIS 863
Query: 568 YGMSEIGPWTLI 579
+ +G L+
Sbjct: 864 PQSARLGLTQLV 875
Score = 192 (72.6 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 59/207 (28%), Positives = 102/207 (49%)
Query: 467 KNKILVAYHEIGHAVCATLTPGHDPVQKVTLIPRGQARGLTWFLPEED---PALISKQQL 523
+ K L+A HE GH V A L P D L+P G+ ++ F P ED + +
Sbjct: 761 EKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAVSVFYPREDMVDQGYTTFGYM 820
Query: 524 FARIVGGLGGRAAEEVIFGEAEITTGAAGDLQQITQIARQMV-----TRYGMSE-IGPWT 577
++V GGR AE V+FG+ +T G DL++IT+IAR+MV R G+++ +
Sbjct: 821 KMQMVVAHGGRCAERVVFGD-NVTDGGKDDLEKITKIAREMVISPQSARLGLTQLVKKIG 879
Query: 578 LID-PSVQSSDVVMRM-----LARNSMSEKLADDIDKTVRNIIESAYEVAKNHIRNNREA 631
++D P +++ + MS ++++ + + IE E+A N +R NR
Sbjct: 880 MVDLPDNPDGELIKYRWDHPHVMPAEMSVEVSELFTRELTRYIEETEELAMNALRANRHI 939
Query: 632 IDKLVDVLMEKETLSGDEFRAVLSEFT 658
+D + L+EK ++G E + + +
Sbjct: 940 LDLITRELLEKSRITGLEVEEKMKDLS 966
Score = 39 (18.8 bits), Expect = 2.7e-54, Sum P(2) = 2.7e-54
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 83 RMTYSRFLQYLDEGSVKKVDLFEN 106
++ Y+ FLQ LD V V E+
Sbjct: 359 KLPYTYFLQKLDSSEVAAVVFTED 382
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 113/259 (43%), Positives = 165/259 (63%)
Query: 198 RSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPP 256
R+KA E++ V ++D+ G+++ Q+ +E+V+ L+ PE F VG + PKG+LL GPP
Sbjct: 155 RAKA-MEVDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPP 213
Query: 257 GTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEID 316
GTGKTLLAKA+A E F + GSE ++ F+G GAS V+D+F AK +P ++FIDEID
Sbjct: 214 GTGKTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEID 273
Query: 317 AVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFD 376
A+ + E ++TL QLL EMDGF V +I ATNRP+ILD A+ RPGRFD
Sbjct: 274 AIAAKRTDALTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFD 333
Query: 377 RQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
R + V PD +GR +ILK+H+ L +DV+L IA T G GA+L + EA + A R
Sbjct: 334 RIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIR 393
Query: 437 RGKANITLKEIDDSIDRIV 455
+ +T+ + ++++I+
Sbjct: 394 ELRDYVTMDDFRKAVEKIM 412
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 513 (185.6 bits), Expect = 1.0e-51, Sum P(2) = 1.0e-51
Identities = 113/273 (41%), Positives = 165/273 (60%)
Query: 200 KAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGT 258
K + E E V +DD+ GV + +E+V+ L+ P+ F A+G K P+G+LL GPPGT
Sbjct: 195 KREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGT 254
Query: 259 GKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAV 318
GKTL+A+A+A E G FF ++G E + G S +R F + + NSP ++FIDEIDA+
Sbjct: 255 GKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAI 314
Query: 319 XXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQ 378
+ ++ ++QLLT MDG + V+VIAATNRP +D AL R GRFDR+
Sbjct: 315 APKREKAH---GEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDRE 371
Query: 379 VSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRG 438
+ +G+PD GR +IL++H+ N KL +DV L +A GF GADLA+L +EAAI R
Sbjct: 372 IDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREK 431
Query: 439 KANITLKE--ID-DSIDRIVAGMEGTKMTDGKN 468
I L++ ID + ++ + ME + GK+
Sbjct: 432 MELIDLEDDTIDAEVLNSLAVTMENFRFAMGKS 464
Score = 499 (180.7 bits), Expect = 3.9e-47, P = 3.9e-47
Identities = 124/360 (34%), Positives = 184/360 (51%)
Query: 191 NLPFGLGRSKAKFEME-----PNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGA 244
N F +G+S E PNT T+ D+ G+ K++ QE+VQ+ ++ PEK+ G
Sbjct: 456 NFRFAMGKSSPSALREAVVETPNT--TWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGM 513
Query: 245 KIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKA 304
+ +GVL GPPG GKTLLAKAIA E F S+ G E + M+ G + VRD+F+KA+A
Sbjct: 514 QPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARA 573
Query: 305 NSPCLVFIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEI 364
+PC++F DE+D++ ++ +NQ+LTEMDG V +I ATNRP+I
Sbjct: 574 AAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDI 633
Query: 365 LDSALHRPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLA 424
+D A+ RPGR D+ + + LPD R QI K L D+ L+ +A T GFSGADL
Sbjct: 634 IDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLT 693
Query: 425 NLMNEAAILAGRRGKANITLKEIDDSIDRIVAGME--GTKMTDGKNKILVAYHEIGHAVC 482
+ A LA R +++ + DR G E ++ D +I A+ E
Sbjct: 694 EICQRACKLAIRESIER-EIRQEKERQDRSARGEELMEDELADPVPEITRAHFEEAMKFA 752
Query: 483 ATLTPGHDPVQKVTLIPRG--QARGL--TWFLPEEDPALISKQQLFARIVGGLGGRAAEE 538
+D ++K + + Q+RG + P E P+ + VGG GG +
Sbjct: 753 RRSVTDND-IRKYEMFAQTLQQSRGFGNNFKFPGEAPSA-------GQPVGGNGGSGGND 804
Score = 51 (23.0 bits), Expect = 1.0e-51, Sum P(2) = 1.0e-51
Identities = 38/147 (25%), Positives = 62/147 (42%)
Query: 483 ATLTPGHDPVQKVTLIPRGQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFG 542
AT P D + L P G+ L ++P D A S+ Q+F + A ++ F
Sbjct: 627 ATNRP--DIIDPAVLRP-GRLDQLI-YIPLPDEA--SRLQIFKASLRKTPLSADLDLNF- 679
Query: 543 EAEITTGAAG-DLQQITQIARQMVTRYGMSEIGPWTLIDPSVQSSDVVMRMLARNSMSEK 601
A+ T G +G DL +I Q A ++ R + I + D R M ++
Sbjct: 680 LAKNTVGFSGADLTEICQRACKLAIRESIERE-----IRQEKERQDRSAR--GEELMEDE 732
Query: 602 LADDIDKTVRNIIESAYEVAKNHIRNN 628
LAD + + R E A + A+ + +N
Sbjct: 733 LADPVPEITRAHFEEAMKFARRSVTDN 759
Score = 45 (20.9 bits), Expect = 4.3e-51, Sum P(2) = 4.3e-51
Identities = 17/61 (27%), Positives = 29/61 (47%)
Query: 585 SSDVVMRMLARNSMSEKLADDIDKTVRNIIESAYEVAKNHIRNNREAIDKLV--DVLMEK 642
S+D+ + LA+N++ AD + R + E + IR +E D+ + LME
Sbjct: 672 SADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIEREIRQEKERQDRSARGEELMED 731
Query: 643 E 643
E
Sbjct: 732 E 732
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 513 (185.6 bits), Expect = 1.0e-51, Sum P(2) = 1.0e-51
Identities = 113/273 (41%), Positives = 165/273 (60%)
Query: 200 KAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGT 258
K + E E V +DD+ GV + +E+V+ L+ P+ F A+G K P+G+LL GPPGT
Sbjct: 195 KREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGT 254
Query: 259 GKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAV 318
GKTL+A+A+A E G FF ++G E + G S +R F + + NSP ++FIDEIDA+
Sbjct: 255 GKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAI 314
Query: 319 XXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQ 378
+ ++ ++QLLT MDG + V+VIAATNRP +D AL R GRFDR+
Sbjct: 315 APKREKAH---GEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDRE 371
Query: 379 VSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRG 438
+ +G+PD GR +IL++H+ N KL +DV L +A GF GADLA+L +EAAI R
Sbjct: 372 IDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREK 431
Query: 439 KANITLKE--ID-DSIDRIVAGMEGTKMTDGKN 468
I L++ ID + ++ + ME + GK+
Sbjct: 432 MELIDLEDDTIDAEVLNSLAVTMENFRFAMGKS 464
Score = 499 (180.7 bits), Expect = 3.9e-47, P = 3.9e-47
Identities = 124/360 (34%), Positives = 184/360 (51%)
Query: 191 NLPFGLGRSKAKFEME-----PNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGA 244
N F +G+S E PNT T+ D+ G+ K++ QE+VQ+ ++ PEK+ G
Sbjct: 456 NFRFAMGKSSPSALREAVVETPNT--TWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGM 513
Query: 245 KIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKA 304
+ +GVL GPPG GKTLLAKAIA E F S+ G E + M+ G + VRD+F+KA+A
Sbjct: 514 QPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARA 573
Query: 305 NSPCLVFIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEI 364
+PC++F DE+D++ ++ +NQ+LTEMDG V +I ATNRP+I
Sbjct: 574 AAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDI 633
Query: 365 LDSALHRPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLA 424
+D A+ RPGR D+ + + LPD R QI K L D+ L+ +A T GFSGADL
Sbjct: 634 IDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLT 693
Query: 425 NLMNEAAILAGRRGKANITLKEIDDSIDRIVAGME--GTKMTDGKNKILVAYHEIGHAVC 482
+ A LA R +++ + DR G E ++ D +I A+ E
Sbjct: 694 EICQRACKLAIRESIER-EIRQEKERQDRSARGEELMEDELADPVPEITRAHFEEAMKFA 752
Query: 483 ATLTPGHDPVQKVTLIPRG--QARGL--TWFLPEEDPALISKQQLFARIVGGLGGRAAEE 538
+D ++K + + Q+RG + P E P+ + VGG GG +
Sbjct: 753 RRSVTDND-IRKYEMFAQTLQQSRGFGNNFKFPGEAPSA-------GQPVGGNGGSGGND 804
Score = 51 (23.0 bits), Expect = 1.0e-51, Sum P(2) = 1.0e-51
Identities = 38/147 (25%), Positives = 62/147 (42%)
Query: 483 ATLTPGHDPVQKVTLIPRGQARGLTWFLPEEDPALISKQQLFARIVGGLGGRAAEEVIFG 542
AT P D + L P G+ L ++P D A S+ Q+F + A ++ F
Sbjct: 627 ATNRP--DIIDPAVLRP-GRLDQLI-YIPLPDEA--SRLQIFKASLRKTPLSADLDLNF- 679
Query: 543 EAEITTGAAG-DLQQITQIARQMVTRYGMSEIGPWTLIDPSVQSSDVVMRMLARNSMSEK 601
A+ T G +G DL +I Q A ++ R + I + D R M ++
Sbjct: 680 LAKNTVGFSGADLTEICQRACKLAIRESIERE-----IRQEKERQDRSAR--GEELMEDE 732
Query: 602 LADDIDKTVRNIIESAYEVAKNHIRNN 628
LAD + + R E A + A+ + +N
Sbjct: 733 LADPVPEITRAHFEEAMKFARRSVTDN 759
Score = 45 (20.9 bits), Expect = 4.3e-51, Sum P(2) = 4.3e-51
Identities = 17/61 (27%), Positives = 29/61 (47%)
Query: 585 SSDVVMRMLARNSMSEKLADDIDKTVRNIIESAYEVAKNHIRNNREAIDKLV--DVLMEK 642
S+D+ + LA+N++ AD + R + E + IR +E D+ + LME
Sbjct: 672 SADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIEREIRQEKERQDRSARGEELMED 731
Query: 643 E 643
E
Sbjct: 732 E 732
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 518 (187.4 bits), Expect = 6.0e-51, Sum P(2) = 6.0e-51
Identities = 115/274 (41%), Positives = 165/274 (60%)
Query: 200 KAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGT 258
K + E E + +DD+ GV + +E+V+ L+ P+ F A+G K P+G+LL GPPGT
Sbjct: 196 KREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGT 255
Query: 259 GKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAV 318
GKTL+A+A+A E G FF ++G E + G S +R F + + N P ++FIDEIDA+
Sbjct: 256 GKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAI 315
Query: 319 XXXXXXXXXXXNDEREQTL-NQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDR 377
N E E+ + +QLLT MDG G S ++VIAATNRP +D AL R GRFDR
Sbjct: 316 APKREKT----NGEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDR 371
Query: 378 QVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRR 437
++ +G+PD GR +IL++H+ N KL DV L IA GF GADLA+L +EAA+ R
Sbjct: 372 EIDIGIPDAVGRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIRE 431
Query: 438 GKANITLKE--ID-DSIDRIVAGMEGTKMTDGKN 468
I L++ ID + ++ + ME + GK+
Sbjct: 432 KMELIDLEDDQIDAEVLNSLAVTMENFRFAQGKS 465
Score = 493 (178.6 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 110/277 (39%), Positives = 156/277 (56%)
Query: 191 NLPFGLGRSKAKFEME-----PNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGA 244
N F G+S E PNT T+ D+ G+ K++ QE+VQ+ ++ PEK+ G
Sbjct: 457 NFRFAQGKSSPSALREAVVETPNT--TWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGM 514
Query: 245 KIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKA 304
+ +GVL GPPG GKTLLAKAIA E F S+ G E + M+ G + VRD+F+KA+A
Sbjct: 515 QPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARA 574
Query: 305 NSPCLVFIDEIDAVXXXXXXXXXXXND-EREQTLNQLLTEMDGFTGNSGVIVIAATNRPE 363
+PC++F DE+D++ ++ +NQ+LTEMDG V +I ATNRP+
Sbjct: 575 AAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPD 634
Query: 364 ILDSALHRPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADL 423
I+D A+ RPGR D+ + + LPD R QILK L KD+ L+ +A T GFSGADL
Sbjct: 635 IIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADL 694
Query: 424 ANLMNEAAILAGRRG-KANITLKEIDDSIDRIVAGME 459
+ A LA R + I +++ + DR G E
Sbjct: 695 TEICQRACKLAIRESIEKEIRIEK--ERQDRQARGEE 729
Score = 38 (18.4 bits), Expect = 6.0e-51, Sum P(2) = 6.0e-51
Identities = 16/63 (25%), Positives = 29/63 (46%)
Query: 585 SSDVVMRMLARNSMSEKLADDIDKTVRNIIESAYEVAKNHIRNNREAIDKLV--DVLMEK 642
S D+ + LA+N++ AD + R + E + IR +E D+ + LME
Sbjct: 674 SKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEKEIRIEKERQDRQARGEELMED 733
Query: 643 ETL 645
+ +
Sbjct: 734 DAV 736
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 518 (187.4 bits), Expect = 6.0e-51, Sum P(2) = 6.0e-51
Identities = 115/274 (41%), Positives = 165/274 (60%)
Query: 200 KAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGT 258
K + E E + +DD+ GV + +E+V+ L+ P+ F A+G K P+G+LL GPPGT
Sbjct: 196 KREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGT 255
Query: 259 GKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAV 318
GKTL+A+A+A E G FF ++G E + G S +R F + + N P ++FIDEIDA+
Sbjct: 256 GKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAI 315
Query: 319 XXXXXXXXXXXNDEREQTL-NQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDR 377
N E E+ + +QLLT MDG G S ++VIAATNRP +D AL R GRFDR
Sbjct: 316 APKREKT----NGEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDR 371
Query: 378 QVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRR 437
++ +G+PD GR +IL++H+ N KL DV L IA GF GADLA+L +EAA+ R
Sbjct: 372 EIDIGIPDAVGRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIRE 431
Query: 438 GKANITLKE--ID-DSIDRIVAGMEGTKMTDGKN 468
I L++ ID + ++ + ME + GK+
Sbjct: 432 KMELIDLEDDQIDAEVLNSLAVTMENFRFAQGKS 465
Score = 493 (178.6 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 110/277 (39%), Positives = 156/277 (56%)
Query: 191 NLPFGLGRSKAKFEME-----PNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGA 244
N F G+S E PNT T+ D+ G+ K++ QE+VQ+ ++ PEK+ G
Sbjct: 457 NFRFAQGKSSPSALREAVVETPNT--TWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGM 514
Query: 245 KIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKA 304
+ +GVL GPPG GKTLLAKAIA E F S+ G E + M+ G + VRD+F+KA+A
Sbjct: 515 QPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARA 574
Query: 305 NSPCLVFIDEIDAVXXXXXXXXXXXND-EREQTLNQLLTEMDGFTGNSGVIVIAATNRPE 363
+PC++F DE+D++ ++ +NQ+LTEMDG V +I ATNRP+
Sbjct: 575 AAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPD 634
Query: 364 ILDSALHRPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADL 423
I+D A+ RPGR D+ + + LPD R QILK L KD+ L+ +A T GFSGADL
Sbjct: 635 IIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADL 694
Query: 424 ANLMNEAAILAGRRG-KANITLKEIDDSIDRIVAGME 459
+ A LA R + I +++ + DR G E
Sbjct: 695 TEICQRACKLAIRESIEKEIRIEK--ERQDRQARGEE 729
Score = 38 (18.4 bits), Expect = 6.0e-51, Sum P(2) = 6.0e-51
Identities = 16/63 (25%), Positives = 29/63 (46%)
Query: 585 SSDVVMRMLARNSMSEKLADDIDKTVRNIIESAYEVAKNHIRNNREAIDKLV--DVLMEK 642
S D+ + LA+N++ AD + R + E + IR +E D+ + LME
Sbjct: 674 SKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEKEIRIEKERQDRQARGEELMED 733
Query: 643 ETL 645
+ +
Sbjct: 734 DAV 736
>POMBASE|SPBC16C6.07c [details] [associations]
symbol:rpt1 "19S proteasome regulatory subunit Rpt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16C6.07c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03061
OMA:DIRWELI PIR:T39558 RefSeq:NP_596805.1 ProteinModelPortal:O42931
IntAct:O42931 STRING:O42931 PRIDE:O42931
EnsemblFungi:SPBC16C6.07c.1 GeneID:2539862 KEGG:spo:SPBC16C6.07c
OrthoDB:EOG4B01XN NextBio:20801008 Uniprot:O42931
Length = 438
Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
Identities = 104/267 (38%), Positives = 159/267 (59%)
Query: 192 LPFGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGV 250
LP + S ++E VT+ DV G E + +E+V+ L +PE+F +G PKG+
Sbjct: 157 LPPKIDPSVTMMQVEEKPDVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGI 216
Query: 251 LLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLV 310
+L GPPGTGKTL A+A+A F + GSE ++ +VG GA VR+LF A+ C++
Sbjct: 217 MLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACII 276
Query: 311 FIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALH 370
F DEIDA+ ++E ++T+ +L+T++DGF + V+ ATNRP LD AL
Sbjct: 277 FFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALM 336
Query: 371 RPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEA 430
RPGR DR+V GLPD+ GR IL++H+ + +DKD+ +IA P +GA+L ++ EA
Sbjct: 337 RPGRIDRKVEFGLPDLEGRAHILRIHAKSMAIDKDIRWELIARLCPSQTGAELRSVCTEA 396
Query: 431 AILAGRRGKANITLKEIDDSIDRIVAG 457
+ A R + T K+ D++ ++V G
Sbjct: 397 GMFAIRARRRVATEKDFLDAVQKVVKG 423
>GENEDB_PFALCIPARUM|PF13_0063 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory
subunit 7, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511
GO:GO:0017111 EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0005838 KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177
RefSeq:XP_001349843.2 ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3
MINT:MINT-1698409 PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA
GeneID:814041 KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500
Uniprot:Q8IEK3
Length = 420
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 104/277 (37%), Positives = 163/277 (58%)
Query: 192 LPFGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGV 250
LP + S +E +T++D+ G E + +E+V+ L PE+F +G PKGV
Sbjct: 140 LPPKIDPSVTMMTVEEKPDITYNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGV 199
Query: 251 LLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLV 310
LL GPPGTGKTL A+AIA F + GSE ++ +VG GA VR+LF AK+ C++
Sbjct: 200 LLYGPPGTGKTLTARAIANRTDACFICVIGSELVQKYVGEGARMVRELFQMAKSKKACIL 259
Query: 311 FIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALH 370
FIDE+DA+ + E ++T+ +++ ++DGF + V+ ATNRP+ LDSAL
Sbjct: 260 FIDEVDAIGGSRGDESAHGDHEVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALV 319
Query: 371 RPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEA 430
RPGR DR++ LPD+ GR I K+H+N + +DV ++A P +G+D+ ++ EA
Sbjct: 320 RPGRIDRRIEFSLPDLEGRTHIFKIHANTMNMSRDVRFELLARLCPNSTGSDIRSVCTEA 379
Query: 431 AILAGRRGKANITLKEIDDSIDRIVAGMEGTKMTDGK 467
+ A R + IT K++ +I++++ G + T GK
Sbjct: 380 GMFAIRARRKTITEKDLLLAINKVIHGCKQFSAT-GK 415
>UNIPROTKB|Q8IEK3 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory subunit 7,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 GO:GO:0017111
EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0005838
KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177 RefSeq:XP_001349843.2
ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3 MINT:MINT-1698409
PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA GeneID:814041
KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500 Uniprot:Q8IEK3
Length = 420
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 104/277 (37%), Positives = 163/277 (58%)
Query: 192 LPFGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGV 250
LP + S +E +T++D+ G E + +E+V+ L PE+F +G PKGV
Sbjct: 140 LPPKIDPSVTMMTVEEKPDITYNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGV 199
Query: 251 LLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLV 310
LL GPPGTGKTL A+AIA F + GSE ++ +VG GA VR+LF AK+ C++
Sbjct: 200 LLYGPPGTGKTLTARAIANRTDACFICVIGSELVQKYVGEGARMVRELFQMAKSKKACIL 259
Query: 311 FIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALH 370
FIDE+DA+ + E ++T+ +++ ++DGF + V+ ATNRP+ LDSAL
Sbjct: 260 FIDEVDAIGGSRGDESAHGDHEVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALV 319
Query: 371 RPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEA 430
RPGR DR++ LPD+ GR I K+H+N + +DV ++A P +G+D+ ++ EA
Sbjct: 320 RPGRIDRRIEFSLPDLEGRTHIFKIHANTMNMSRDVRFELLARLCPNSTGSDIRSVCTEA 379
Query: 431 AILAGRRGKANITLKEIDDSIDRIVAGMEGTKMTDGK 467
+ A R + IT K++ +I++++ G + T GK
Sbjct: 380 GMFAIRARRKTITEKDLLLAINKVIHGCKQFSAT-GK 415
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 100/269 (37%), Positives = 159/269 (59%)
Query: 192 LPFGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGV 250
LP + S +E VT++DV G E + +E+V+ + PEKF +G PKGV
Sbjct: 146 LPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGV 205
Query: 251 LLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLV 310
L GPPGTGKTLLA+A+A F + GSE ++ +VG GA VR+LF A++ C+V
Sbjct: 206 LCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIV 265
Query: 311 FIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALH 370
F DE+DA+ ++E ++T+ +++ ++DGF + V+ ATNRP+ LD AL
Sbjct: 266 FFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALL 325
Query: 371 RPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEA 430
RPGR DR+V GLPD+ R QI K+H+ ++D+ ++A P +GAD+ ++ EA
Sbjct: 326 RPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEA 385
Query: 431 AILAGRRGKANITLKEIDDSIDRIVAGME 459
+ A R + +T K+ D++++++ G +
Sbjct: 386 GMYAIRARRKTVTEKDFLDAVNKVIKGYQ 414
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 521 (188.5 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 113/247 (45%), Positives = 146/247 (59%)
Query: 189 GPNLPFGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIP 247
G + P L R A E+ PN V ++D+ G+DE KQD +E VQ+ + PEKF G
Sbjct: 475 GVSNPSAL-REVAVVEV-PN--VRWEDIGGLDEVKQDLREQVQYPVDHPEKFLKFGLSPS 530
Query: 248 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSP 307
+GVL GPPGTGKT+LAKA+A E F S+ G E + M+ G S +RD+F+KA+A +P
Sbjct: 531 RGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAP 590
Query: 308 CLVFIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDS 367
C+VF+DE+D++ ++ +NQLLTEMDG T V VI ATNRPE LD
Sbjct: 591 CIVFLDELDSIAKARGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDP 650
Query: 368 ALHRPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLM 427
AL RPGR D + V LPD GR ILK + DV L IA +T GFSGADL +
Sbjct: 651 ALCRPGRLDSLIYVPLPDELGRLSILKAQLRKTPVSDDVDLQYIANKTHGFSGADLGFIT 710
Query: 428 NEAAILA 434
A +A
Sbjct: 711 QRAVKIA 717
Score = 507 (183.5 bits), Expect = 5.5e-48, P = 5.5e-48
Identities = 115/263 (43%), Positives = 158/263 (60%)
Query: 204 EMEPNTG-VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKT 261
E E N V +DD+ G + +E+V+ L+ P+ F ++G K P+GVLL GPPGTGKT
Sbjct: 211 EEENNLNEVGYDDIGGCRKQMAQIREMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKT 270
Query: 262 LLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXX 321
L+A+A+A E G FF ++G E + G S +R F +A+ NSP ++FIDEID++
Sbjct: 271 LMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPK 330
Query: 322 XXXXXXXXNDEREQ-TLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVS 380
N E E+ ++QLLT MDG S V+V+AATNRP +D AL R GRFDR+V
Sbjct: 331 REKT----NGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVD 386
Query: 381 VGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKA 440
+G+PD GR +IL++H+ N KL DV L IA T G+ G+D+A L +EAA+ R
Sbjct: 387 IGIPDPTGRLEILQIHTKNMKLGDDVDLEQIAAETHGYVGSDVAALCSEAAMQQIREKMD 446
Query: 441 NITLKEIDDSIDRIVAGMEGTKM 463
I L E D+ID V G M
Sbjct: 447 LIDLDE--DTIDAEVLDSLGVTM 467
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 519 (187.8 bits), Expect = 2.6e-49, P = 2.6e-49
Identities = 122/278 (43%), Positives = 161/278 (57%)
Query: 189 GPNLPFGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIP 247
G + P L R A E+ PN V ++D+ G++E K++ E VQ+ + PEKF G
Sbjct: 478 GVSNPSAL-REVAVVEV-PN--VRWEDIGGLEEVKRELIESVQYPVDHPEKFQKFGLSPS 533
Query: 248 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSP 307
+GVL GPPGTGKT+LAKA+A E F S+ G E + M+ G S +RD+F+KA+A +P
Sbjct: 534 RGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAP 593
Query: 308 CLVFIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDS 367
C+VF+DE+D++ ++ +NQLLTEMDG T V VI ATNRPE LD+
Sbjct: 594 CVVFLDELDSIAKSRGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDA 653
Query: 368 ALHRPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLM 427
AL RPGR D V V LPD RE ILK + DV + IA++T GFSGADL +
Sbjct: 654 ALVRPGRLDTLVYVPLPDQASREGILKAQLRKTPVASDVDIEFIASKTHGFSGADLGFVT 713
Query: 428 NEAAILAGRRGKANITLKEIDDSIDRIVAGMEGTKMTD 465
A LA K +I+ EI+ R AG E KM D
Sbjct: 714 QRAVKLAI---KESISA-EIERQKQREAAG-EDVKMED 746
Score = 512 (185.3 bits), Expect = 1.6e-48, P = 1.6e-48
Identities = 111/255 (43%), Positives = 156/255 (61%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
V +DD+ G + +E+V+ L+ P+ F ++G K P+G+L+ GPPGTGKTL+A+A+A
Sbjct: 222 VGYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVAN 281
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
E G FF ++G E + G S +R F +A+ NSP ++FIDEID++
Sbjct: 282 ETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKT---- 337
Query: 330 NDEREQ-TLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRG 388
N E E+ ++QLLT MDG S V+V+AATNRP +D AL R GRFDR+V +G+PD G
Sbjct: 338 NGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTG 397
Query: 389 REQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEID 448
R +IL +H+ N KL +DV L IA T G+ G+DLA+L +EAA+ R I L E
Sbjct: 398 RLEILSIHTKNMKLGEDVDLETIAAETHGYVGSDLASLCSEAAMQQIREKMDLIDLDE-- 455
Query: 449 DSIDRIVAGMEGTKM 463
D+ID V G M
Sbjct: 456 DTIDAEVLDSLGVTM 470
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 517 (187.1 bits), Expect = 4.5e-49, P = 4.5e-49
Identities = 111/252 (44%), Positives = 157/252 (62%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
V +DD+ G + +E+V+ L+ P+ F ++G K PKG+L+ GPPGTGKT++A+A+A
Sbjct: 212 VGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVAN 271
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
E G FF ++G E + G S +R F +A+ NSP ++FIDEID++
Sbjct: 272 ETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKRDKT---- 327
Query: 330 NDEREQ-TLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRG 388
N E E+ ++QLLT MDG S V+VIAATNRP +D AL R GRFDR+V +G+PD G
Sbjct: 328 NGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEG 387
Query: 389 REQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEID 448
R +IL++H+ N KL DV L IA+ T GF GAD+A+L +EAA+ R I L+E
Sbjct: 388 RLEILRIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAMQQIREKMDLIDLEE-- 445
Query: 449 DSIDRIVAGMEG 460
++ID V G
Sbjct: 446 ETIDTEVLNSLG 457
Score = 489 (177.2 bits), Expect = 5.5e-46, P = 5.5e-46
Identities = 105/269 (39%), Positives = 154/269 (57%)
Query: 191 NLPFGLGRSKAKFEMEP---NTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKI 246
N F LG S E N VT+DD+ G+D K + +E V++ + P+++ G
Sbjct: 462 NFRFALGNSNPSALRETVVENVNVTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAP 521
Query: 247 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANS 306
KGVL GPPGTGKTLLAKA+A E F S+ G E + M+ G S +RD+F+KA+A +
Sbjct: 522 TKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAA 581
Query: 307 PCLVFIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILD 366
P +VF+DE+D++ ++ +NQLLTEMDG V VI ATNRP+ +D
Sbjct: 582 PTVVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQID 641
Query: 367 SALHRPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANL 426
AL RPGR D+ + V LPD R IL+ N L+ + L+ IA T GFSGADL+ +
Sbjct: 642 PALLRPGRLDQLIYVPLPDEPARLSILQAQLRNTPLEPGLDLNEIAKITHGFSGADLSYI 701
Query: 427 MNEAAILAGRRG-KANITLKEIDDSIDRI 454
+ +A A + +A + + +I + +++
Sbjct: 702 VQRSAKFAIKDSIEAQVKINKIKEEKEKV 730
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 517 (187.1 bits), Expect = 4.5e-49, P = 4.5e-49
Identities = 111/252 (44%), Positives = 157/252 (62%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
V +DD+ G + +E+V+ L+ P+ F ++G K PKG+L+ GPPGTGKT++A+A+A
Sbjct: 212 VGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVAN 271
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
E G FF ++G E + G S +R F +A+ NSP ++FIDEID++
Sbjct: 272 ETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKRDKT---- 327
Query: 330 NDEREQ-TLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRG 388
N E E+ ++QLLT MDG S V+VIAATNRP +D AL R GRFDR+V +G+PD G
Sbjct: 328 NGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEG 387
Query: 389 REQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEID 448
R +IL++H+ N KL DV L IA+ T GF GAD+A+L +EAA+ R I L+E
Sbjct: 388 RLEILRIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAMQQIREKMDLIDLEE-- 445
Query: 449 DSIDRIVAGMEG 460
++ID V G
Sbjct: 446 ETIDTEVLNSLG 457
Score = 489 (177.2 bits), Expect = 5.5e-46, P = 5.5e-46
Identities = 105/269 (39%), Positives = 154/269 (57%)
Query: 191 NLPFGLGRSKAKFEMEP---NTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKI 246
N F LG S E N VT+DD+ G+D K + +E V++ + P+++ G
Sbjct: 462 NFRFALGNSNPSALRETVVENVNVTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAP 521
Query: 247 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANS 306
KGVL GPPGTGKTLLAKA+A E F S+ G E + M+ G S +RD+F+KA+A +
Sbjct: 522 TKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAA 581
Query: 307 PCLVFIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILD 366
P +VF+DE+D++ ++ +NQLLTEMDG V VI ATNRP+ +D
Sbjct: 582 PTVVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQID 641
Query: 367 SALHRPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANL 426
AL RPGR D+ + V LPD R IL+ N L+ + L+ IA T GFSGADL+ +
Sbjct: 642 PALLRPGRLDQLIYVPLPDEPARLSILQAQLRNTPLEPGLDLNEIAKITHGFSGADLSYI 701
Query: 427 MNEAAILAGRRG-KANITLKEIDDSIDRI 454
+ +A A + +A + + +I + +++
Sbjct: 702 VQRSAKFAIKDSIEAQVKINKIKEEKEKV 730
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 513 (185.6 bits), Expect = 1.0e-48, P = 1.0e-48
Identities = 113/269 (42%), Positives = 162/269 (60%)
Query: 200 KAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGT 258
K + E E + +DD+ G + +E+V+ L+ P F A+G K P+G+LL GPPGT
Sbjct: 192 KREDEEESLNDIGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 251
Query: 259 GKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAV 318
GKTL+A+A+A E G FF ++G E + G S +R F +A+ N+P ++FIDE+DA+
Sbjct: 252 GKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI 311
Query: 319 XXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQ 378
ER + ++QLLT MDG + V+V+AATNRP +D+AL R GRFDR+
Sbjct: 312 APKREKTHGEV--ER-RIVSQLLTLMDGLKQRAHVVVMAATNRPNSVDAALRRFGRFDRE 368
Query: 379 VSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRG 438
+ +G+PD GR +IL++H+ N KL +DV L I+ T G GADLA L +EAA+ A R+
Sbjct: 369 IDIGIPDSTGRLEILQIHTKNMKLSEDVDLEQISAETHGHVGADLAALCSEAALQAIRKK 428
Query: 439 KANITLKEIDDSIDRIVAGMEGTKMTDGK 467
I L+ DDSID + M D K
Sbjct: 429 MTLIDLE--DDSIDADLLNSLAVTMDDFK 455
Score = 493 (178.6 bits), Expect = 1.7e-46, P = 1.7e-46
Identities = 96/227 (42%), Positives = 139/227 (61%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
V ++D+ G+DE K++ QE+VQ+ ++ P+KF G +GVL GPPG GKTLLAKAIA
Sbjct: 476 VNWEDIGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIAN 535
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
E F S+ G E + M+ G + VRD+F+KA+ +PC++F DE+D++
Sbjct: 536 ECQANFVSIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKARGGGAGDA 595
Query: 330 NDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGR 389
++ +NQ+LTEMDG T V +I ATNRP+I+D A+ RPGR D+ + + LPD+ R
Sbjct: 596 GGAADRVINQILTEMDGMTNKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDMPSR 655
Query: 390 EQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
IL+ + + KDV L ++ T GFSGADL + A LA R
Sbjct: 656 TAILRANLRKSPVAKDVDLMYLSKITEGFSGADLTEICQRACKLAIR 702
>ASPGD|ASPL0000034636 [details] [associations]
symbol:AN2917 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001306
EMBL:AACD01000051 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
OrthoDB:EOG4B01XN RefSeq:XP_660521.1 ProteinModelPortal:Q5B963
STRING:Q5B963 EnsemblFungi:CADANIAT00010170 GeneID:2874156
KEGG:ani:AN2917.2 Uniprot:Q5B963
Length = 443
Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
Identities = 100/267 (37%), Positives = 156/267 (58%)
Query: 192 LPFGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGV 250
LP + S +E VT+ DV G E + +E+V+ L +PE+F +G PKG
Sbjct: 163 LPPKIDPSVTMMTVEDKPDVTYGDVGGCKEQIEKLREVVEMPLLSPERFVNLGIDPPKGA 222
Query: 251 LLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLV 310
LL GPPGTGKTL A+A+A F + GSE ++ +VG GA VR+LF A+ C++
Sbjct: 223 LLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACII 282
Query: 311 FIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALH 370
F DEIDAV ++E ++T+ +L+T++DGF + V+ ATNRP LD AL
Sbjct: 283 FFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDARGNIKVMFATNRPSTLDPALM 342
Query: 371 RPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEA 430
RPGR DR++ LPD+ GR IL++H+ + +++D+ +I+ P +GA+L ++ EA
Sbjct: 343 RPGRIDRKIEFSLPDVEGRANILRIHAKSMSVERDIRWELISRLCPNATGAELRSVATEA 402
Query: 431 AILAGRRGKANITLKEIDDSIDRIVAG 457
+ A R + T K+ ++D+++ G
Sbjct: 403 GMFAIRARRKVATEKDFLAAVDKVIKG 429
>DICTYBASE|DDB_G0276917 [details] [associations]
symbol:psmC2 "26S proteasome ATPase 2 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0276917 GO:GO:0005524 GO:GO:0005634 GO:GO:0045335
GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0000502 GO:GO:0006511
HSSP:Q9WZ49 EMBL:AAFI02000019 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03061 RefSeq:XP_642830.1 ProteinModelPortal:Q86JA1
STRING:Q86JA1 PRIDE:Q86JA1 EnsemblProtists:DDB0232966
GeneID:8620693 KEGG:ddi:DDB_G0276917 OMA:HIFTIHA
ProtClustDB:CLSZ2429177 Uniprot:Q86JA1
Length = 428
Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
Identities = 98/265 (36%), Positives = 155/265 (58%)
Query: 192 LPFGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGV 250
LP + S ++E +T+ DV G E + +E+V+ L PEKF +G PKGV
Sbjct: 148 LPPKIDASVTMMQVEEKPDITYKDVGGCKEQIEKLREVVEMPLLHPEKFVNLGIDPPKGV 207
Query: 251 LLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLV 310
L+ GPPGTGKTL A+A+A F + GSE ++ +VG GA VRDLF A++ C++
Sbjct: 208 LMYGPPGTGKTLCARAVANRTDAAFVRVIGSELVQKYVGEGARMVRDLFQMARSKKACII 267
Query: 311 FIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALH 370
F DE+DA+ ++E ++T+ +L+ ++DGF + V+ ATNRP+ LD AL
Sbjct: 268 FFDEVDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALL 327
Query: 371 RPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEA 430
RPGR DR+V GLPD+ GR I +H+ +D+ ++A P +GAD+ ++ EA
Sbjct: 328 RPGRLDRKVEFGLPDLEGRAHIFTIHAKTMSCARDIRFELLARLCPNSTGADIRSVCTEA 387
Query: 431 AILAGRRGKANITLKEIDDSIDRIV 455
+ A R + ++ K+ ++ID+++
Sbjct: 388 GMFAIRARRKVVSEKDFLEAIDKVI 412
>SGD|S000001628 [details] [associations]
symbol:RPT1 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IMP] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IDA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000001628 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:BK006944 GO:GO:0006511 GO:GO:0017111
GO:GO:0045899 GO:GO:0045732 PDB:3VLF PDB:4A3V PDBsum:3VLF
PDBsum:4A3V GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 OrthoDB:EOG4B01XN
EMBL:Z22817 EMBL:X73571 EMBL:Z28145 PIR:S34354 RefSeq:NP_012777.1
ProteinModelPortal:P33299 SMR:P33299 DIP:DIP-2883N IntAct:P33299
MINT:MINT-612502 STRING:P33299 SWISS-2DPAGE:P33299 PaxDb:P33299
PeptideAtlas:P33299 PRIDE:P33299 EnsemblFungi:YKL145W GeneID:853712
KEGG:sce:YKL145W CYGD:YKL145w NextBio:974719 Genevestigator:P33299
GermOnline:YKL145W Uniprot:P33299
Length = 467
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 100/267 (37%), Positives = 157/267 (58%)
Query: 192 LPFGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGV 250
LP + S +E VT+ DV G + + +E+V+ L +PE+FA +G PKG+
Sbjct: 187 LPPRIDPSVTMMTVEEKPDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGI 246
Query: 251 LLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLV 310
LL GPPGTGKTL A+A+A F + GSE ++ +VG GA VR+LF A+ C++
Sbjct: 247 LLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACII 306
Query: 311 FIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALH 370
F DEIDAV ++E ++T+ +L+T++DGF + V+ ATNRP LD AL
Sbjct: 307 FFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALL 366
Query: 371 RPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEA 430
RPGR DR+V LPD+ GR I ++HS + +++ + +I+ P +GA+L ++ EA
Sbjct: 367 RPGRIDRKVEFSLPDLEGRANIFRIHSKSMSVERGIRWELISRLCPNSTGAELRSVCTEA 426
Query: 431 AILAGRRGKANITLKEIDDSIDRIVAG 457
+ A R + T K+ ++D++++G
Sbjct: 427 GMFAIRARRKVATEKDFLKAVDKVISG 453
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 512 (185.3 bits), Expect = 1.7e-48, P = 1.7e-48
Identities = 111/255 (43%), Positives = 155/255 (60%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
V +DD+ G + +E+V+ L+ P+ F A+G K P+GVL+ GPPGTGKTL+A+A+A
Sbjct: 211 VGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVAN 270
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
E G FF ++G E + G S +R F +A+ N+P ++FIDEID++
Sbjct: 271 ETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKRDKT---- 326
Query: 330 NDEREQ-TLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRG 388
N E E+ ++QLLT MDG S V+VIAATNRP +D AL R GRFDR+V +G+PD G
Sbjct: 327 NGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATG 386
Query: 389 REQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEID 448
R ++L++H+ N KL DV L +A T G+ GAD+A+L +EAA+ R I L E
Sbjct: 387 RLEVLRIHTKNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQQIREKMDLIDLDE-- 444
Query: 449 DSIDRIVAGMEGTKM 463
D ID V G M
Sbjct: 445 DEIDAEVLDSLGVTM 459
Score = 486 (176.1 bits), Expect = 1.2e-45, P = 1.2e-45
Identities = 102/245 (41%), Positives = 141/245 (57%)
Query: 191 NLPFGLGRSKAKFEMEP---NTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKI 246
N F LG S E + VT+DDV G+DE K++ +E V++ + P+++ G
Sbjct: 461 NFRFALGNSNPSALRETVVESVNVTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSP 520
Query: 247 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANS 306
KGVL GPPGTGKTLLAKA+A E F S+ G E + M+ G S +RD+F+KA+A +
Sbjct: 521 SKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAA 580
Query: 307 PCLVFIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILD 366
P +VF+DE+D++ ++ +NQLLTEMDG V VI ATNRP+ +D
Sbjct: 581 PTVVFLDELDSIAKARGGSLGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQID 640
Query: 367 SALHRPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANL 426
A+ RPGR D+ + V LPD R IL L+ + L+ IA T GFSGADL +
Sbjct: 641 PAILRPGRLDQLIYVPLPDENARLSILNAQLRKTPLEPGLELTAIAKATQGFSGADLLYI 700
Query: 427 MNEAA 431
+ AA
Sbjct: 701 VQRAA 705
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 511 (184.9 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 115/267 (43%), Positives = 160/267 (59%)
Query: 200 KAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGT 258
K + E E V +DD+ GV + +E+V+ L+ P F A+G K P+G+LL GPPGT
Sbjct: 190 KREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 249
Query: 259 GKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAV 318
GKTL+A+A+A E G FF ++G E + G S +R F +A+ N+P ++FIDE+DA+
Sbjct: 250 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI 309
Query: 319 XXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQ 378
ER + ++QLLT MDG + VIV+AATNRP +D AL R GRFDR+
Sbjct: 310 APKREKTHGEV--ER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 366
Query: 379 VSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRG 438
V +G+PD GR +IL++H+ N KL DV L +A T G GADLA L +EAA+ A R+
Sbjct: 367 VDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKK 426
Query: 439 KANITLKEIDDSIDRIVAGMEGTKMTD 465
I L+ D++ID V M D
Sbjct: 427 MDLIDLE--DETIDAEVMNSLAVTMDD 451
Score = 502 (181.8 bits), Expect = 1.8e-47, P = 1.8e-47
Identities = 100/241 (41%), Positives = 145/241 (60%)
Query: 207 PNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAK 265
PN +T++D+ G+D+ K++ QE+VQ+ ++ P+KF G KGVL GPPG GKTLLAK
Sbjct: 472 PN--ITWEDIGGLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAK 529
Query: 266 AIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXX 325
AIA E F S+ G E + M+ G + VR++F+KA+ +PC++F DE+D++
Sbjct: 530 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGN 589
Query: 326 XXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPD 385
++ +NQ+LTEMDG + V +I ATNRP+I+D A+ RPGR D+ + + LPD
Sbjct: 590 VGDGGGAADRVINQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD 649
Query: 386 IRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLK 445
+ R ILK + + KDV L +A T GFSGADL + A LA R N +
Sbjct: 650 EKSRIAILKANLRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRR 709
Query: 446 E 446
E
Sbjct: 710 E 710
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 511 (184.9 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 113/268 (42%), Positives = 159/268 (59%)
Query: 200 KAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGT 258
K + E E V +DD+ G + +E+V+ L+ P F A+G K P+G+LL GPPGT
Sbjct: 190 KREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 249
Query: 259 GKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAV 318
GKTL+A+A+A E G FF ++G E + G S +R F + + N+P ++FIDE+DA+
Sbjct: 250 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEETEKNAPAIIFIDELDAI 309
Query: 319 XXXXXXXXXXXNDEREQTL-NQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDR 377
+ E E+ + +QLLT MDG + VIV+AATNRP +D AL R GRFDR
Sbjct: 310 ASDDCFPSPQTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDR 369
Query: 378 QVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRR 437
+V +G+PD GR +IL++H+ N KL DV L +A T G GADLA L +EAA+ A R+
Sbjct: 370 EVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRK 429
Query: 438 GKANITLKEIDDSIDRIVAGMEGTKMTD 465
I L+ D++ID V M D
Sbjct: 430 KMDLIDLE--DETIDAEVMNSLAVTMDD 455
Score = 490 (177.5 bits), Expect = 3.8e-46, P = 3.8e-46
Identities = 96/227 (42%), Positives = 140/227 (61%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
VT++D+ G+++ K++ QE+VQ+ ++ P+KF G KGVL GPPG GKTLLAKAIA
Sbjct: 478 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 537
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
E F S+ G E + M+ G + VR++F+KA+ +PC++F DE+D++
Sbjct: 538 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 597
Query: 330 NDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGR 389
++ +NQ+LTEMDG + V +I ATNRP+I+D A+ RPGR D+ + + LPD + R
Sbjct: 598 GGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 657
Query: 390 EQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
ILK + + KDV L +A T GFSGADL + A LA R
Sbjct: 658 VAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIR 704
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 99/267 (37%), Positives = 154/267 (57%)
Query: 192 LPFGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGV 250
LP + S +E VT+ DV G E + +E+V+ L +PE+F +G PKG+
Sbjct: 164 LPPRIDPSVTMMTVEEKPDVTYSDVGGCKEQIEKLREVVELPLLSPERFVKLGIDPPKGI 223
Query: 251 LLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLV 310
LL GPPGTGKTL A+A+A F + GSE ++ +VG GA VR+LF A+ C++
Sbjct: 224 LLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACII 283
Query: 311 FIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALH 370
F DE+DA+ ++E ++T+ +L+T++DGF + V+ ATNRP LD AL
Sbjct: 284 FFDEVDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALL 343
Query: 371 RPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEA 430
RPGR DR+V LPD+ GR I ++HS ++KD+ +I+ P +GA+L ++ EA
Sbjct: 344 RPGRIDRKVEFSLPDLEGRANIFRIHSKTMSVEKDIRWELISRLCPNATGAELRSVCTEA 403
Query: 431 AILAGRRGKANITLKEIDDSIDRIVAG 457
+ A R + K+ ++D+++ G
Sbjct: 404 GMFAIRARRKVANEKDFLKAVDKVIKG 430
>WB|WBGene00004501 [details] [associations]
symbol:rpt-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0016887 GO:GO:0000502 GO:GO:0006511 EMBL:Z78012
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 PIR:T20152
RefSeq:NP_506005.1 ProteinModelPortal:Q18787 SMR:Q18787
IntAct:Q18787 MINT:MINT-212537 STRING:Q18787 PaxDb:Q18787
PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1 EnsemblMetazoa:C52E4.4.2
GeneID:179641 KEGG:cel:CELE_C52E4.4 UCSC:C52E4.4.1 CTD:179641
WormBase:C52E4.4 InParanoid:Q18787 NextBio:906264 Uniprot:Q18787
Length = 435
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 100/267 (37%), Positives = 158/267 (59%)
Query: 192 LPFGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGV 250
LP + + ++E VT+ DV G + + +E+V+ L PE++ +G + PKGV
Sbjct: 155 LPAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGV 214
Query: 251 LLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLV 310
LL GPPGTGKTL A+A+A F + GSE ++ +VG GA VR+LF A+ CL+
Sbjct: 215 LLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 274
Query: 311 FIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALH 370
F DEIDAV ++E ++T+ +L+ ++DGF + V+ ATNRP+ LD AL
Sbjct: 275 FFDEIDAVGGARFDDGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 334
Query: 371 RPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEA 430
RPGR DR+V LPD+ GR ILK+H+ +++D+ ++A P +GA++ ++ EA
Sbjct: 335 RPGRLDRKVEFALPDLAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEA 394
Query: 431 AILAGRRGKANITLKEIDDSIDRIVAG 457
+ A R + T K+ ++I+++V G
Sbjct: 395 GMFAIRARRKVATEKDFLEAINKVVKG 421
>UNIPROTKB|Q18787 [details] [associations]
symbol:rpt-1 "26S protease regulatory subunit 7"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0016887 GO:GO:0000502
GO:GO:0006511 EMBL:Z78012 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
GeneTree:ENSGT00550000074978 PIR:T20152 RefSeq:NP_506005.1
ProteinModelPortal:Q18787 SMR:Q18787 IntAct:Q18787 MINT:MINT-212537
STRING:Q18787 PaxDb:Q18787 PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1
EnsemblMetazoa:C52E4.4.2 GeneID:179641 KEGG:cel:CELE_C52E4.4
UCSC:C52E4.4.1 CTD:179641 WormBase:C52E4.4 InParanoid:Q18787
NextBio:906264 Uniprot:Q18787
Length = 435
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 100/267 (37%), Positives = 158/267 (59%)
Query: 192 LPFGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGV 250
LP + + ++E VT+ DV G + + +E+V+ L PE++ +G + PKGV
Sbjct: 155 LPAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGV 214
Query: 251 LLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLV 310
LL GPPGTGKTL A+A+A F + GSE ++ +VG GA VR+LF A+ CL+
Sbjct: 215 LLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 274
Query: 311 FIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALH 370
F DEIDAV ++E ++T+ +L+ ++DGF + V+ ATNRP+ LD AL
Sbjct: 275 FFDEIDAVGGARFDDGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 334
Query: 371 RPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEA 430
RPGR DR+V LPD+ GR ILK+H+ +++D+ ++A P +GA++ ++ EA
Sbjct: 335 RPGRLDRKVEFALPDLAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEA 394
Query: 431 AILAGRRGKANITLKEIDDSIDRIVAG 457
+ A R + T K+ ++I+++V G
Sbjct: 395 GMFAIRARRKVATEKDFLEAINKVVKG 421
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 509 (184.2 bits), Expect = 3.2e-48, P = 3.2e-48
Identities = 112/255 (43%), Positives = 154/255 (60%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
V +DD+ G +E+V+ L+ P+ F ++G K P+G+L+ GPPGTGKTL+A+A+A
Sbjct: 221 VGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVAN 280
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
E G FF ++G E + G S +R F +A+ NSP ++FIDEID++
Sbjct: 281 ETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKT---- 336
Query: 330 NDEREQ-TLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRG 388
N E E+ ++QLLT MDG S V+V+AATNRP +D AL R GRFDR+V VG+PD G
Sbjct: 337 NGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTG 396
Query: 389 REQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEID 448
R +IL++H+ N KL DV L IA T G+ G+DLA+L +EAA+ R I L E
Sbjct: 397 RLEILRIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDE-- 454
Query: 449 DSIDRIVAGMEGTKM 463
D ID V G M
Sbjct: 455 DEIDAEVLDSLGVTM 469
Score = 482 (174.7 bits), Expect = 3.0e-45, P = 3.0e-45
Identities = 108/250 (43%), Positives = 143/250 (57%)
Query: 191 NLPFGLGRSKAKFEME-----PNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGA 244
N F LG S E PN V ++D+ G++E K++ +E VQ + EKF G
Sbjct: 471 NFRFALGSSNPSALRETVVEVPN--VRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGV 528
Query: 245 KIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKA 304
KGVL GPPGTGKTLLAKAIA E F S+ G E + M+ G S VRD+F+KA+A
Sbjct: 529 TPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGESESNVRDIFDKARA 588
Query: 305 NSPCLVFIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEI 364
+PC+VF+DE+D++ ++ +NQLLTEMDG V VI ATNRP+
Sbjct: 589 AAPCVVFLDELDSIAKARGASAGDSGGG-DRVVNQLLTEMDGVNSKKNVFVIGATNRPDQ 647
Query: 365 LDSALHRPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLA 424
+D AL RPGR D+ + V LPD R IL+ + + +DV L +A T GFSGADL
Sbjct: 648 IDPALMRPGRLDQLIYVPLPDEEARFSILQTQLRHTPVAEDVDLRAVAKATHGFSGADLE 707
Query: 425 NLMNEAAILA 434
++ A LA
Sbjct: 708 FVVQRAVKLA 717
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 97/265 (36%), Positives = 158/265 (59%)
Query: 192 LPFGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGV 250
LP + + ++E VT+ DV G E + +E+V+ L PE+F +G + PKGV
Sbjct: 153 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGV 212
Query: 251 LLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLV 310
LL GPPGTGKTL A+A+A F + GSE ++ +VG GA VR+LF A+ CL+
Sbjct: 213 LLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 272
Query: 311 FIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALH 370
F DEIDA+ ++E ++T+ +L+ ++DGF + V+ ATNRP+ LD AL
Sbjct: 273 FFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 332
Query: 371 RPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEA 430
RPGR DR++ LPD+ GR ILK+H+ + +++D+ ++A P +GA++ ++ EA
Sbjct: 333 RPGRLDRKIEFSLPDLEGRTHILKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 392
Query: 431 AILAGRRGKANITLKEIDDSIDRIV 455
+ A R + T K+ +++++++
Sbjct: 393 GMFAIRARRKIATEKDFLEAVNKVI 417
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 477 (173.0 bits), Expect = 3.7e-48, Sum P(2) = 3.7e-48
Identities = 96/236 (40%), Positives = 141/236 (59%)
Query: 202 KFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGK 260
K E +++ DV G+ E ++ +E+V+ L PE F VG PKG LL GPPGTGK
Sbjct: 138 KMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGK 197
Query: 261 TLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXX 320
TLLA+A+A + F + S ++ ++G A +R++FN A+ + PC+VF+DEIDA+
Sbjct: 198 TLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGG 257
Query: 321 XXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVS 380
+ E ++TL +LL ++DGF V VI ATNRP+ LD AL RPGR DR++
Sbjct: 258 RRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIE 317
Query: 381 VGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
+GLP+ + R +ILK+HSN ++ + + GFS ADL N+ EA + A R
Sbjct: 318 IGLPNEQSRLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIR 373
Score = 43 (20.2 bits), Expect = 3.7e-48, Sum P(2) = 3.7e-48
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 184 VNSPGGPNLPFGLGRSKAKFEMEPNTGVTFD 214
V + GP G RS K E++ T V+ D
Sbjct: 88 VKATNGPRYVVGCRRSINKEELKQGTRVSLD 118
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 477 (173.0 bits), Expect = 3.7e-48, Sum P(2) = 3.7e-48
Identities = 96/236 (40%), Positives = 141/236 (59%)
Query: 202 KFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGK 260
K E +++ DV G+ E ++ +E+V+ L PE F VG PKG LL GPPGTGK
Sbjct: 138 KMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGK 197
Query: 261 TLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXX 320
TLLA+A+A + F + S ++ ++G A +R++FN A+ + PC+VF+DEIDA+
Sbjct: 198 TLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGG 257
Query: 321 XXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVS 380
+ E ++TL +LL ++DGF V VI ATNRP+ LD AL RPGR DR++
Sbjct: 258 RRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIE 317
Query: 381 VGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
+GLP+ + R +ILK+HSN ++ + + GFS ADL N+ EA + A R
Sbjct: 318 IGLPNEQSRLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIR 373
Score = 43 (20.2 bits), Expect = 3.7e-48, Sum P(2) = 3.7e-48
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 184 VNSPGGPNLPFGLGRSKAKFEMEPNTGVTFD 214
V + GP G RS K E++ T V+ D
Sbjct: 88 VKATNGPRYVVGCRRSINKEELKQGTRVSLD 118
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 99/265 (37%), Positives = 157/265 (59%)
Query: 192 LPFGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGV 250
LP + + ++E VT+ DV G E + +E+V+ L PEKF +G + PKGV
Sbjct: 153 LPPKIDPTVTMMQVEDKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGV 212
Query: 251 LLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLV 310
LL GPPGTGKTL A+A+A F + GSE ++ +VG GA VR+LF A++ CL+
Sbjct: 213 LLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKKACLI 272
Query: 311 FIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALH 370
F DEIDA+ ++E ++T+ +L+ ++DGF + V+ ATNRP+ LD AL
Sbjct: 273 FFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 332
Query: 371 RPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEA 430
RPGR DR+V GLPD GR I K+H+ + +++D+ ++A P +GA++ ++ EA
Sbjct: 333 RPGRLDRKVEFGLPDQDGRSHIFKIHARSMSVERDIRFDLLARLCPNSTGAEIRSVCTEA 392
Query: 431 AILAGRRGKANITLKEIDDSIDRIV 455
+ A R + T K+ +++ +++
Sbjct: 393 GMFAIRARRKVATEKDFLEAVKKVI 417
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 507 (183.5 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 112/264 (42%), Positives = 160/264 (60%)
Query: 200 KAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGT 258
K + E E V +DD+ G + +E+V+ L+ P F A+G K P+G+L+ GPPGT
Sbjct: 187 KREEEEESLNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGT 246
Query: 259 GKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAV 318
GKTL+A+A+A E G FF ++G E + G S +R F +A+ NSP ++FIDEIDA+
Sbjct: 247 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAI 306
Query: 319 XXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQ 378
ER + ++QLLT MDG +S +IV+AATNRP +D AL R GRFDR+
Sbjct: 307 APKRDKTHGEV--ER-RIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDRE 363
Query: 379 VSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRG 438
+ +G+PD GR ++L++H+ N KL DV L IA + G GADLA+L +EAA+ R
Sbjct: 364 IDIGIPDATGRLEVLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAALQQIREK 423
Query: 439 KANITLKEIDDSID-RIVAGMEGT 461
I L+ DD ID ++A + T
Sbjct: 424 MDLIDLE--DDKIDAEVLASLAVT 445
Score = 501 (181.4 bits), Expect = 2.2e-47, P = 2.2e-47
Identities = 100/232 (43%), Positives = 144/232 (62%)
Query: 207 PNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAK 265
PNT T+ D+ G++ K++ QE+VQ+ ++ P+KF G + +GVL GPPG GKTLLAK
Sbjct: 469 PNT--TWTDIGGLESVKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAK 526
Query: 266 AIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXX 325
AIA E F S+ G E + M+ G + VRD+F+KA++ +PC++F DE+D++
Sbjct: 527 AIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARGGN 586
Query: 326 XXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPD 385
++ +NQ+LTEMDG V +I ATNRP+I+D A+ RPGR D+ + + LPD
Sbjct: 587 VGDAGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD 646
Query: 386 IRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRR 437
+ RE ILK + L K+V L+ IA T GFSGADL + A LA R+
Sbjct: 647 DKSREAILKANLRKSPLAKEVDLTYIAKVTQGFSGADLTEICQRACKLAIRQ 698
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 507 (183.5 bits), Expect = 4.9e-48, P = 4.9e-48
Identities = 114/267 (42%), Positives = 159/267 (59%)
Query: 200 KAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGT 258
K + E E V +DD+ G + +E+V+ L+ P F A+G K P+G+LL GPPGT
Sbjct: 190 KREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 249
Query: 259 GKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAV 318
GKTL+A+A+A E G FF ++G E + G S +R F +A+ N+P ++FIDE+DA+
Sbjct: 250 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI 309
Query: 319 XXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQ 378
ER + ++QLLT MDG + VIV+AATNRP +D AL R GRFDR+
Sbjct: 310 APKREKTHGEV--ER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 366
Query: 379 VSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRG 438
V +G+PD GR +IL++H+ N KL DV L +A T G GADLA L +EAA+ A R+
Sbjct: 367 VDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKK 426
Query: 439 KANITLKEIDDSIDRIVAGMEGTKMTD 465
I L+ D++ID V M D
Sbjct: 427 MDLIDLE--DETIDAEVMNSLAVTMDD 451
Score = 492 (178.3 bits), Expect = 2.2e-46, P = 2.2e-46
Identities = 98/237 (41%), Positives = 143/237 (60%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
VT++D+ G+++ K++ QE+VQ+ ++ P+KF G KGVL GPPG GKTLLAKAIA
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
E F S+ G E + M+ G + VR++F+KA+ +PC++F DE+D++
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 593
Query: 330 NDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGR 389
++ +NQ+LTEMDG + V +I ATNRP+I+D A+ RPGR D+ + + LPD + R
Sbjct: 594 GGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 653
Query: 390 EQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKE 446
ILK + + KDV L +A T GFSGADL + A LA R N +E
Sbjct: 654 IAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRE 710
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 507 (183.5 bits), Expect = 4.9e-48, P = 4.9e-48
Identities = 114/267 (42%), Positives = 159/267 (59%)
Query: 200 KAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGT 258
K + E E V +DD+ G + +E+V+ L+ P F A+G K P+G+LL GPPGT
Sbjct: 190 KREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 249
Query: 259 GKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAV 318
GKTL+A+A+A E G FF ++G E + G S +R F +A+ N+P ++FIDE+DA+
Sbjct: 250 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI 309
Query: 319 XXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQ 378
ER + ++QLLT MDG + VIV+AATNRP +D AL R GRFDR+
Sbjct: 310 APKREKTHGEV--ER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 366
Query: 379 VSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRG 438
V +G+PD GR +IL++H+ N KL DV L +A T G GADLA L +EAA+ A R+
Sbjct: 367 VDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKK 426
Query: 439 KANITLKEIDDSIDRIVAGMEGTKMTD 465
I L+ D++ID V M D
Sbjct: 427 MDLIDLE--DETIDAEVMNSLAVTMDD 451
Score = 491 (177.9 bits), Expect = 2.9e-46, P = 2.9e-46
Identities = 98/239 (41%), Positives = 144/239 (60%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
VT++D+ G+++ K++ QE+VQ+ ++ P+KF G KGVL GPPG GKTLLAKAIA
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
E F S+ G E + M+ G + VR++F+KA+ +PC++F DE+D++
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 593
Query: 330 NDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGR 389
++ +NQ+LTEMDG + V +I ATNRP+I+D A+ RPGR D+ + + LPD + R
Sbjct: 594 GGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 653
Query: 390 EQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEID 448
ILK + + KDV + +A T GFSGADL + A LA R N +E D
Sbjct: 654 MAILKANLRKSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERD 712
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 506 (183.2 bits), Expect = 6.4e-48, P = 6.4e-48
Identities = 114/267 (42%), Positives = 159/267 (59%)
Query: 200 KAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGT 258
K + E E V +DD+ G + +E+V+ L+ P F A+G K P+G+LL GPPGT
Sbjct: 190 KREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 249
Query: 259 GKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAV 318
GKTL+A+A+A E G FF ++G E + G S +R F +A+ N+P ++FIDE+DA+
Sbjct: 250 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI 309
Query: 319 XXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQ 378
ER + ++QLLT MDG + VIV+AATNRP +D AL R GRFDR+
Sbjct: 310 APKREKTHGEV--ER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 366
Query: 379 VSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRG 438
V +G+PD GR +IL++H+ N KL DV L +A T G GADLA L +EAA+ A R+
Sbjct: 367 VDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKK 426
Query: 439 KANITLKEIDDSIDRIVAGMEGTKMTD 465
I L+ D++ID V M D
Sbjct: 427 MDLIDLE--DETIDAEVMNSLAVTMDD 451
Score = 490 (177.5 bits), Expect = 3.7e-46, P = 3.7e-46
Identities = 96/227 (42%), Positives = 140/227 (61%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
VT++D+ G+++ K++ QE+VQ+ ++ P+KF G KGVL GPPG GKTLLAKAIA
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
E F S+ G E + M+ G + VR++F+KA+ +PC++F DE+D++
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 593
Query: 330 NDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGR 389
++ +NQ+LTEMDG + V +I ATNRP+I+D A+ RPGR D+ + + LPD + R
Sbjct: 594 GGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 653
Query: 390 EQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
ILK + + KDV L +A T GFSGADL + A LA R
Sbjct: 654 VAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIR 700
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 506 (183.2 bits), Expect = 6.4e-48, P = 6.4e-48
Identities = 114/267 (42%), Positives = 159/267 (59%)
Query: 200 KAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGT 258
K + E E V +DD+ G + +E+V+ L+ P F A+G K P+G+LL GPPGT
Sbjct: 190 KREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 249
Query: 259 GKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAV 318
GKTL+A+A+A E G FF ++G E + G S +R F +A+ N+P ++FIDE+DA+
Sbjct: 250 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI 309
Query: 319 XXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQ 378
ER + ++QLLT MDG + VIV+AATNRP +D AL R GRFDR+
Sbjct: 310 APKREKTHGEV--ER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 366
Query: 379 VSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRG 438
V +G+PD GR +IL++H+ N KL DV L +A T G GADLA L +EAA+ A R+
Sbjct: 367 VDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKK 426
Query: 439 KANITLKEIDDSIDRIVAGMEGTKMTD 465
I L+ D++ID V M D
Sbjct: 427 MDLIDLE--DETIDAEVMNSLAVTMDD 451
Score = 490 (177.5 bits), Expect = 3.7e-46, P = 3.7e-46
Identities = 96/227 (42%), Positives = 140/227 (61%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
VT++D+ G+++ K++ QE+VQ+ ++ P+KF G KGVL GPPG GKTLLAKAIA
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
E F S+ G E + M+ G + VR++F+KA+ +PC++F DE+D++
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 593
Query: 330 NDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGR 389
++ +NQ+LTEMDG + V +I ATNRP+I+D A+ RPGR D+ + + LPD + R
Sbjct: 594 GGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 653
Query: 390 EQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
ILK + + KDV L +A T GFSGADL + A LA R
Sbjct: 654 VAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIR 700
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 506 (183.2 bits), Expect = 6.4e-48, P = 6.4e-48
Identities = 114/267 (42%), Positives = 159/267 (59%)
Query: 200 KAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGT 258
K + E E V +DD+ G + +E+V+ L+ P F A+G K P+G+LL GPPGT
Sbjct: 190 KREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 249
Query: 259 GKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAV 318
GKTL+A+A+A E G FF ++G E + G S +R F +A+ N+P ++FIDE+DA+
Sbjct: 250 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI 309
Query: 319 XXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQ 378
ER + ++QLLT MDG + VIV+AATNRP +D AL R GRFDR+
Sbjct: 310 APKREKTHGEV--ER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 366
Query: 379 VSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRG 438
V +G+PD GR +IL++H+ N KL DV L +A T G GADLA L +EAA+ A R+
Sbjct: 367 VDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKK 426
Query: 439 KANITLKEIDDSIDRIVAGMEGTKMTD 465
I L+ D++ID V M D
Sbjct: 427 MDLIDLE--DETIDAEVMNSLAVTMDD 451
Score = 490 (177.5 bits), Expect = 3.7e-46, P = 3.7e-46
Identities = 96/227 (42%), Positives = 140/227 (61%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
VT++D+ G+++ K++ QE+VQ+ ++ P+KF G KGVL GPPG GKTLLAKAIA
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
E F S+ G E + M+ G + VR++F+KA+ +PC++F DE+D++
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 593
Query: 330 NDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGR 389
++ +NQ+LTEMDG + V +I ATNRP+I+D A+ RPGR D+ + + LPD + R
Sbjct: 594 GGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 653
Query: 390 EQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
ILK + + KDV L +A T GFSGADL + A LA R
Sbjct: 654 VAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIR 700
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 506 (183.2 bits), Expect = 6.4e-48, P = 6.4e-48
Identities = 114/267 (42%), Positives = 159/267 (59%)
Query: 200 KAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGT 258
K + E E V +DD+ G + +E+V+ L+ P F A+G K P+G+LL GPPGT
Sbjct: 190 KREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 249
Query: 259 GKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAV 318
GKTL+A+A+A E G FF ++G E + G S +R F +A+ N+P ++FIDE+DA+
Sbjct: 250 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI 309
Query: 319 XXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQ 378
ER + ++QLLT MDG + VIV+AATNRP +D AL R GRFDR+
Sbjct: 310 APKREKTHGEV--ER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 366
Query: 379 VSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRG 438
V +G+PD GR +IL++H+ N KL DV L +A T G GADLA L +EAA+ A R+
Sbjct: 367 VDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKK 426
Query: 439 KANITLKEIDDSIDRIVAGMEGTKMTD 465
I L+ D++ID V M D
Sbjct: 427 MDLIDLE--DETIDAEVMNSLAVTMDD 451
Score = 490 (177.5 bits), Expect = 3.7e-46, P = 3.7e-46
Identities = 96/227 (42%), Positives = 140/227 (61%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
VT++D+ G+++ K++ QE+VQ+ ++ P+KF G KGVL GPPG GKTLLAKAIA
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
E F S+ G E + M+ G + VR++F+KA+ +PC++F DE+D++
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 593
Query: 330 NDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGR 389
++ +NQ+LTEMDG + V +I ATNRP+I+D A+ RPGR D+ + + LPD + R
Sbjct: 594 GGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 653
Query: 390 EQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
ILK + + KDV L +A T GFSGADL + A LA R
Sbjct: 654 VAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIR 700
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 506 (183.2 bits), Expect = 6.4e-48, P = 6.4e-48
Identities = 114/267 (42%), Positives = 159/267 (59%)
Query: 200 KAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGT 258
K + E E V +DD+ G + +E+V+ L+ P F A+G K P+G+LL GPPGT
Sbjct: 190 KREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 249
Query: 259 GKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAV 318
GKTL+A+A+A E G FF ++G E + G S +R F +A+ N+P ++FIDE+DA+
Sbjct: 250 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI 309
Query: 319 XXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQ 378
ER + ++QLLT MDG + VIV+AATNRP +D AL R GRFDR+
Sbjct: 310 APKREKTHGEV--ER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 366
Query: 379 VSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRG 438
V +G+PD GR +IL++H+ N KL DV L +A T G GADLA L +EAA+ A R+
Sbjct: 367 VDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKK 426
Query: 439 KANITLKEIDDSIDRIVAGMEGTKMTD 465
I L+ D++ID V M D
Sbjct: 427 MDLIDLE--DETIDAEVMNSLAVTMDD 451
Score = 490 (177.5 bits), Expect = 3.7e-46, P = 3.7e-46
Identities = 96/227 (42%), Positives = 140/227 (61%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
VT++D+ G+++ K++ QE+VQ+ ++ P+KF G KGVL GPPG GKTLLAKAIA
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
E F S+ G E + M+ G + VR++F+KA+ +PC++F DE+D++
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 593
Query: 330 NDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGR 389
++ +NQ+LTEMDG + V +I ATNRP+I+D A+ RPGR D+ + + LPD + R
Sbjct: 594 GGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 653
Query: 390 EQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
ILK + + KDV L +A T GFSGADL + A LA R
Sbjct: 654 VAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIR 700
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 506 (183.2 bits), Expect = 6.4e-48, P = 6.4e-48
Identities = 114/267 (42%), Positives = 159/267 (59%)
Query: 200 KAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGT 258
K + E E V +DD+ G + +E+V+ L+ P F A+G K P+G+LL GPPGT
Sbjct: 190 KREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 249
Query: 259 GKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAV 318
GKTL+A+A+A E G FF ++G E + G S +R F +A+ N+P ++FIDE+DA+
Sbjct: 250 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI 309
Query: 319 XXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQ 378
ER + ++QLLT MDG + VIV+AATNRP +D AL R GRFDR+
Sbjct: 310 APKREKTHGEV--ER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 366
Query: 379 VSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRG 438
V +G+PD GR +IL++H+ N KL DV L +A T G GADLA L +EAA+ A R+
Sbjct: 367 VDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKK 426
Query: 439 KANITLKEIDDSIDRIVAGMEGTKMTD 465
I L+ D++ID V M D
Sbjct: 427 MDLIDLE--DETIDAEVMNSLAVTMDD 451
Score = 487 (176.5 bits), Expect = 7.9e-46, P = 7.9e-46
Identities = 95/227 (41%), Positives = 140/227 (61%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
VT++D+ G+++ K++ Q++VQ+ ++ P+KF G KGVL GPPG GKTLLAKAIA
Sbjct: 474 VTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
E F S+ G E + M+ G + VR++F+KA+ +PC++F DE+D++
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 593
Query: 330 NDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGR 389
++ +NQ+LTEMDG + V +I ATNRP+I+D A+ RPGR D+ + + LPD + R
Sbjct: 594 GGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 653
Query: 390 EQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
ILK + + KDV L +A T GFSGADL + A LA R
Sbjct: 654 VAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIR 700
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 506 (183.2 bits), Expect = 6.5e-48, P = 6.5e-48
Identities = 114/267 (42%), Positives = 159/267 (59%)
Query: 200 KAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGT 258
K + E E V +DD+ G + +E+V+ L+ P F A+G K P+G+LL GPPGT
Sbjct: 190 KREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 249
Query: 259 GKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAV 318
GKTL+A+A+A E G FF ++G E + G S +R F +A+ N+P ++FIDE+DA+
Sbjct: 250 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI 309
Query: 319 XXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQ 378
ER + ++QLLT MDG + VIV+AATNRP +D AL R GRFDR+
Sbjct: 310 APKREKTHGEV--ER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 366
Query: 379 VSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRG 438
V +G+PD GR +IL++H+ N KL DV L +A T G GADLA L +EAA+ A R+
Sbjct: 367 VDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKK 426
Query: 439 KANITLKEIDDSIDRIVAGMEGTKMTD 465
I L+ D++ID V M D
Sbjct: 427 MDLIDLE--DETIDAEVMNSLAVTMDD 451
Score = 479 (173.7 bits), Expect = 6.1e-45, P = 6.1e-45
Identities = 96/229 (41%), Positives = 140/229 (61%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
VT++D+ G+++ K++ QE+VQ+ ++ P+KF G KGVL GPPG GKTLLAKAIA
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
E F S+ G E + M+ G + VR++F+KA+ +PC++F DE+D++
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 593
Query: 330 NDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGR 389
++ +NQ+LTEMDG + V +I ATNRP+I+D A+ RPGR D+ + + LPD + R
Sbjct: 594 GGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 653
Query: 390 EQILKVHSNNKKLDK--DVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
ILK + + K DV L +A T GFSGADL + A LA R
Sbjct: 654 VAILKANLRKSPVAKAGDVDLEFLAKMTNGFSGADLTEICQRACKLAIR 702
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 506 (183.2 bits), Expect = 7.2e-48, P = 7.2e-48
Identities = 114/267 (42%), Positives = 159/267 (59%)
Query: 200 KAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGT 258
K + E E V +DD+ G + +E+V+ L+ P F A+G K P+G+LL GPPGT
Sbjct: 206 KREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 265
Query: 259 GKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAV 318
GKTL+A+A+A E G FF ++G E + G S +R F +A+ N+P ++FIDE+DA+
Sbjct: 266 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI 325
Query: 319 XXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQ 378
ER + ++QLLT MDG + VIV+AATNRP +D AL R GRFDR+
Sbjct: 326 APKREKTHGEV--ER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 382
Query: 379 VSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRG 438
V +G+PD GR +IL++H+ N KL DV L +A T G GADLA L +EAA+ A R+
Sbjct: 383 VDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKK 442
Query: 439 KANITLKEIDDSIDRIVAGMEGTKMTD 465
I L+ D++ID V M D
Sbjct: 443 MDLIDLE--DETIDAEVMNSLAVTMDD 467
Score = 490 (177.5 bits), Expect = 4.1e-46, P = 4.1e-46
Identities = 96/227 (42%), Positives = 140/227 (61%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
VT++D+ G+++ K++ QE+VQ+ ++ P+KF G KGVL GPPG GKTLLAKAIA
Sbjct: 490 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 549
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
E F S+ G E + M+ G + VR++F+KA+ +PC++F DE+D++
Sbjct: 550 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 609
Query: 330 NDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGR 389
++ +NQ+LTEMDG + V +I ATNRP+I+D A+ RPGR D+ + + LPD + R
Sbjct: 610 GGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 669
Query: 390 EQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
ILK + + KDV L +A T GFSGADL + A LA R
Sbjct: 670 VAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIR 716
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 96/265 (36%), Positives = 157/265 (59%)
Query: 192 LPFGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGV 250
LP + + ++E VT+ DV G E + +E+V+ L PE+F +G + PKGV
Sbjct: 144 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGV 203
Query: 251 LLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLV 310
LL GPPGTGKTL A+A+A F + GSE ++ +VG GA VR+LF A+ CL+
Sbjct: 204 LLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 263
Query: 311 FIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALH 370
F DEIDA+ ++E ++T+ +L+ ++DGF + V+ ATNRP+ LD AL
Sbjct: 264 FFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 323
Query: 371 RPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEA 430
RPGR DR++ LPD+ GR I K+H+ + +++D+ ++A P +GA++ ++ EA
Sbjct: 324 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 383
Query: 431 AILAGRRGKANITLKEIDDSIDRIV 455
+ A R + T K+ +++++++
Sbjct: 384 GMFAIRARRKIATEKDFLEAVNKVI 408
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 96/265 (36%), Positives = 157/265 (59%)
Query: 192 LPFGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGV 250
LP + + ++E VT+ DV G E + +E+V+ L PE+F +G + PKGV
Sbjct: 152 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGV 211
Query: 251 LLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLV 310
LL GPPGTGKTL A+A+A F + GSE ++ +VG GA VR+LF A+ CL+
Sbjct: 212 LLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 271
Query: 311 FIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALH 370
F DEIDA+ ++E ++T+ +L+ ++DGF + V+ ATNRP+ LD AL
Sbjct: 272 FFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 331
Query: 371 RPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEA 430
RPGR DR++ LPD+ GR I K+H+ + +++D+ ++A P +GA++ ++ EA
Sbjct: 332 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 391
Query: 431 AILAGRRGKANITLKEIDDSIDRIV 455
+ A R + T K+ +++++++
Sbjct: 392 GMFAIRARRKIATEKDFLEAVNKVI 416
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 96/265 (36%), Positives = 157/265 (59%)
Query: 192 LPFGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGV 250
LP + + ++E VT+ DV G E + +E+V+ L PE+F +G + PKGV
Sbjct: 153 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGV 212
Query: 251 LLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLV 310
LL GPPGTGKTL A+A+A F + GSE ++ +VG GA VR+LF A+ CL+
Sbjct: 213 LLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 272
Query: 311 FIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALH 370
F DEIDA+ ++E ++T+ +L+ ++DGF + V+ ATNRP+ LD AL
Sbjct: 273 FFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 332
Query: 371 RPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEA 430
RPGR DR++ LPD+ GR I K+H+ + +++D+ ++A P +GA++ ++ EA
Sbjct: 333 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 392
Query: 431 AILAGRRGKANITLKEIDDSIDRIV 455
+ A R + T K+ +++++++
Sbjct: 393 GMFAIRARRKIATEKDFLEAVNKVI 417
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 96/265 (36%), Positives = 157/265 (59%)
Query: 192 LPFGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGV 250
LP + + ++E VT+ DV G E + +E+V+ L PE+F +G + PKGV
Sbjct: 153 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGV 212
Query: 251 LLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLV 310
LL GPPGTGKTL A+A+A F + GSE ++ +VG GA VR+LF A+ CL+
Sbjct: 213 LLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 272
Query: 311 FIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALH 370
F DEIDA+ ++E ++T+ +L+ ++DGF + V+ ATNRP+ LD AL
Sbjct: 273 FFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 332
Query: 371 RPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEA 430
RPGR DR++ LPD+ GR I K+H+ + +++D+ ++A P +GA++ ++ EA
Sbjct: 333 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 392
Query: 431 AILAGRRGKANITLKEIDDSIDRIV 455
+ A R + T K+ +++++++
Sbjct: 393 GMFAIRARRKIATEKDFLEAVNKVI 417
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 96/265 (36%), Positives = 157/265 (59%)
Query: 192 LPFGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGV 250
LP + + ++E VT+ DV G E + +E+V+ L PE+F +G + PKGV
Sbjct: 16 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGV 75
Query: 251 LLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLV 310
LL GPPGTGKTL A+A+A F + GSE ++ +VG GA VR+LF A+ CL+
Sbjct: 76 LLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 135
Query: 311 FIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALH 370
F DEIDA+ ++E ++T+ +L+ ++DGF + V+ ATNRP+ LD AL
Sbjct: 136 FFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 195
Query: 371 RPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEA 430
RPGR DR++ LPD+ GR I K+H+ + +++D+ ++A P +GA++ ++ EA
Sbjct: 196 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 255
Query: 431 AILAGRRGKANITLKEIDDSIDRIV 455
+ A R + T K+ +++++++
Sbjct: 256 GMFAIRARRKIATEKDFLEAVNKVI 280
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 96/265 (36%), Positives = 157/265 (59%)
Query: 192 LPFGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGV 250
LP + + ++E VT+ DV G E + +E+V+ L PE+F +G + PKGV
Sbjct: 153 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGV 212
Query: 251 LLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLV 310
LL GPPGTGKTL A+A+A F + GSE ++ +VG GA VR+LF A+ CL+
Sbjct: 213 LLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 272
Query: 311 FIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALH 370
F DEIDA+ ++E ++T+ +L+ ++DGF + V+ ATNRP+ LD AL
Sbjct: 273 FFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 332
Query: 371 RPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEA 430
RPGR DR++ LPD+ GR I K+H+ + +++D+ ++A P +GA++ ++ EA
Sbjct: 333 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 392
Query: 431 AILAGRRGKANITLKEIDDSIDRIV 455
+ A R + T K+ +++++++
Sbjct: 393 GMFAIRARRKIATEKDFLEAVNKVI 417
>UNIPROTKB|F1SB53 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
Length = 475
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 96/265 (36%), Positives = 157/265 (59%)
Query: 192 LPFGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGV 250
LP + + ++E VT+ DV G E + +E+V+ L PE+F +G + PKGV
Sbjct: 195 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGV 254
Query: 251 LLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLV 310
LL GPPGTGKTL A+A+A F + GSE ++ +VG GA VR+LF A+ CL+
Sbjct: 255 LLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 314
Query: 311 FIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALH 370
F DEIDA+ ++E ++T+ +L+ ++DGF + V+ ATNRP+ LD AL
Sbjct: 315 FFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 374
Query: 371 RPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEA 430
RPGR DR++ LPD+ GR I K+H+ + +++D+ ++A P +GA++ ++ EA
Sbjct: 375 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 434
Query: 431 AILAGRRGKANITLKEIDDSIDRIV 455
+ A R + T K+ +++++++
Sbjct: 435 GMFAIRARRKIATEKDFLEAVNKVI 459
>UNIPROTKB|I3LJ30 [details] [associations]
symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
Length = 434
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 96/265 (36%), Positives = 157/265 (59%)
Query: 192 LPFGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGV 250
LP + + ++E VT+ DV G E + +E+V+ L PE+F +G + PKGV
Sbjct: 154 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGV 213
Query: 251 LLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLV 310
LL GPPGTGKTL A+A+A F + GSE ++ +VG GA VR+LF A+ CL+
Sbjct: 214 LLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 273
Query: 311 FIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALH 370
F DEIDA+ ++E ++T+ +L+ ++DGF + V+ ATNRP+ LD AL
Sbjct: 274 FFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 333
Query: 371 RPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEA 430
RPGR DR++ LPD+ GR I K+H+ + +++D+ ++A P +GA++ ++ EA
Sbjct: 334 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 393
Query: 431 AILAGRRGKANITLKEIDDSIDRIV 455
+ A R + T K+ +++++++
Sbjct: 394 GMFAIRARRKIATEKDFLEAVNKVI 418
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 96/265 (36%), Positives = 157/265 (59%)
Query: 192 LPFGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGV 250
LP + + ++E VT+ DV G E + +E+V+ L PE+F +G + PKGV
Sbjct: 153 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGV 212
Query: 251 LLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLV 310
LL GPPGTGKTL A+A+A F + GSE ++ +VG GA VR+LF A+ CL+
Sbjct: 213 LLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 272
Query: 311 FIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALH 370
F DEIDA+ ++E ++T+ +L+ ++DGF + V+ ATNRP+ LD AL
Sbjct: 273 FFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 332
Query: 371 RPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEA 430
RPGR DR++ LPD+ GR I K+H+ + +++D+ ++A P +GA++ ++ EA
Sbjct: 333 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 392
Query: 431 AILAGRRGKANITLKEIDDSIDRIV 455
+ A R + T K+ +++++++
Sbjct: 393 GMFAIRARRKVATEKDFLEAVNKVI 417
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 96/265 (36%), Positives = 157/265 (59%)
Query: 192 LPFGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGV 250
LP + + ++E VT+ DV G E + +E+V+ L PE+F +G + PKGV
Sbjct: 153 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGV 212
Query: 251 LLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLV 310
LL GPPGTGKTL A+A+A F + GSE ++ +VG GA VR+LF A+ CL+
Sbjct: 213 LLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 272
Query: 311 FIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALH 370
F DEIDA+ ++E ++T+ +L+ ++DGF + V+ ATNRP+ LD AL
Sbjct: 273 FFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 332
Query: 371 RPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEA 430
RPGR DR++ LPD+ GR I K+H+ + +++D+ ++A P +GA++ ++ EA
Sbjct: 333 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 392
Query: 431 AILAGRRGKANITLKEIDDSIDRIV 455
+ A R + T K+ +++++++
Sbjct: 393 GMFAIRARRKIATEKDFLEAVNKVI 417
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 96/265 (36%), Positives = 157/265 (59%)
Query: 192 LPFGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGV 250
LP + + ++E VT+ DV G E + +E+V+ L PE+F +G + PKGV
Sbjct: 153 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGV 212
Query: 251 LLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLV 310
LL GPPGTGKTL A+A+A F + GSE ++ +VG GA VR+LF A+ CL+
Sbjct: 213 LLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 272
Query: 311 FIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALH 370
F DEIDA+ ++E ++T+ +L+ ++DGF + V+ ATNRP+ LD AL
Sbjct: 273 FFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 332
Query: 371 RPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEA 430
RPGR DR++ LPD+ GR I K+H+ + +++D+ ++A P +GA++ ++ EA
Sbjct: 333 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 392
Query: 431 AILAGRRGKANITLKEIDDSIDRIV 455
+ A R + T K+ +++++++
Sbjct: 393 GMFAIRARRKIATEKDFLEAVNKVI 417
>RGD|3428 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
GermOnline:ENSRNOG00000012026 Uniprot:Q63347
Length = 433
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 96/265 (36%), Positives = 157/265 (59%)
Query: 192 LPFGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGV 250
LP + + ++E VT+ DV G E + +E+V+ L PE+F +G + PKGV
Sbjct: 153 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGV 212
Query: 251 LLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLV 310
LL GPPGTGKTL A+A+A F + GSE ++ +VG GA VR+LF A+ CL+
Sbjct: 213 LLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLI 272
Query: 311 FIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALH 370
F DEIDA+ ++E ++T+ +L+ ++DGF + V+ ATNRP+ LD AL
Sbjct: 273 FFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 332
Query: 371 RPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEA 430
RPGR DR++ LPD+ GR I K+H+ + +++D+ ++A P +GA++ ++ EA
Sbjct: 333 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 392
Query: 431 AILAGRRGKANITLKEIDDSIDRIV 455
+ A R + T K+ +++++++
Sbjct: 393 GMFAIRARRKIATEKDFLEAVNKVI 417
>UNIPROTKB|Q63347 [details] [associations]
symbol:Psmc2 "26S protease regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
Uniprot:Q63347
Length = 433
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 96/265 (36%), Positives = 157/265 (59%)
Query: 192 LPFGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGV 250
LP + + ++E VT+ DV G E + +E+V+ L PE+F +G + PKGV
Sbjct: 153 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGV 212
Query: 251 LLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLV 310
LL GPPGTGKTL A+A+A F + GSE ++ +VG GA VR+LF A+ CL+
Sbjct: 213 LLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLI 272
Query: 311 FIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALH 370
F DEIDA+ ++E ++T+ +L+ ++DGF + V+ ATNRP+ LD AL
Sbjct: 273 FFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 332
Query: 371 RPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEA 430
RPGR DR++ LPD+ GR I K+H+ + +++D+ ++A P +GA++ ++ EA
Sbjct: 333 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 392
Query: 431 AILAGRRGKANITLKEIDDSIDRIV 455
+ A R + T K+ +++++++
Sbjct: 393 GMFAIRARRKIATEKDFLEAVNKVI 417
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 96/265 (36%), Positives = 157/265 (59%)
Query: 192 LPFGLGRSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGV 250
LP + + ++E VT+ DV G E + +E+V+ L PE+F +G + PKGV
Sbjct: 153 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGV 212
Query: 251 LLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLV 310
LL GPPGTGKTL A+A+A F + GSE ++ +VG GA VR+LF A+ CL+
Sbjct: 213 LLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 272
Query: 311 FIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALH 370
F DEIDA+ ++E ++T+ +L+ ++DGF + V+ ATNRP+ LD AL
Sbjct: 273 FFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 332
Query: 371 RPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEA 430
RPGR DR++ LPD+ GR I K+H+ + +++D+ ++A P +GA++ ++ EA
Sbjct: 333 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 392
Query: 431 AILAGRRGKANITLKEIDDSIDRIV 455
+ A R + T K+ +++++++
Sbjct: 393 GMFAIRARRKIATEKDFLEAVNKVI 417
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
Identities = 96/245 (39%), Positives = 156/245 (63%)
Query: 212 TFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGE 270
T++ V G+D ++ +E+++ ++ PE F A+G PKGVLL GPPGTGKTLLA+A+A
Sbjct: 173 TYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 232
Query: 271 AGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXN 330
F +SGSE ++ F+G GA VR+LF A+ ++P ++F+DEID++ +
Sbjct: 233 TECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSRGGD 292
Query: 331 DEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGRE 390
E ++T+ +LL ++DGF + VI ATNR +ILDSAL RPGR DR++ PD + R
Sbjct: 293 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPAPDEKARA 352
Query: 391 QILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDS 450
QILK+HS L + + + IA + PG SGA++ ++ EA + A R + ++T ++ + +
Sbjct: 353 QILKIHSRKMNLMRGIRMDKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQEDFEMA 412
Query: 451 IDRIV 455
+ +++
Sbjct: 413 VGKVM 417
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 499 (180.7 bits), Expect = 3.9e-47, P = 3.9e-47
Identities = 108/244 (44%), Positives = 153/244 (62%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
V +DDV GV + +E+V+ L+ P+ F ++G K PKG+LL GPPG+GKTL+A+A+A
Sbjct: 204 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 263
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
E G FF ++G E + G S +R F +A+ N+P ++FIDEID++
Sbjct: 264 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT---- 319
Query: 330 NDEREQTL-NQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRG 388
N E E+ + +QLLT MDG + VIV+ ATNRP +D AL R GRFDR++ +G+PD G
Sbjct: 320 NGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIG 379
Query: 389 REQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEID 448
R ++L++H+ N KL +DV L I+ T G+ GADLA L EAA+ R I L+ D
Sbjct: 380 RLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLE--D 437
Query: 449 DSID 452
DSID
Sbjct: 438 DSID 441
Score = 472 (171.2 bits), Expect = 3.6e-44, P = 3.6e-44
Identities = 98/232 (42%), Positives = 137/232 (59%)
Query: 207 PNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAK 265
PN V+++D+ G++ K++ QE VQ+ ++ PEKF G KGVL GPPG GKTLLAK
Sbjct: 475 PN--VSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 532
Query: 266 AIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXX 325
AIA E F S+ G E + M+ G + VR++F+KA+ ++PC++F DE+D++
Sbjct: 533 AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGG 592
Query: 326 XXXXND-EREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLP 384
++ LNQLLTEMDG V +I ATNRP+I+DSAL RPGR D+ + + LP
Sbjct: 593 SGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLP 652
Query: 385 DIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
D R I K + KDV + +A T GFSGAD+ + A A R
Sbjct: 653 DEDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGADITEICQRACKYAIR 704
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 499 (180.7 bits), Expect = 3.9e-47, P = 3.9e-47
Identities = 108/244 (44%), Positives = 153/244 (62%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
V +DDV GV + +E+V+ L+ P+ F ++G K PKG+LL GPPG+GKTL+A+A+A
Sbjct: 204 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 263
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
E G FF ++G E + G S +R F +A+ N+P ++FIDEID++
Sbjct: 264 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT---- 319
Query: 330 NDEREQTL-NQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRG 388
N E E+ + +QLLT MDG + VIV+ ATNRP +D AL R GRFDR++ +G+PD G
Sbjct: 320 NGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIG 379
Query: 389 REQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEID 448
R ++L++H+ N KL +DV L I+ T G+ GADLA L EAA+ R I L+ D
Sbjct: 380 RLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLE--D 437
Query: 449 DSID 452
DSID
Sbjct: 438 DSID 441
Score = 489 (177.2 bits), Expect = 4.9e-46, P = 4.9e-46
Identities = 109/273 (39%), Positives = 156/273 (57%)
Query: 207 PNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAK 265
PN V+++D+ G++ K++ QE VQ+ ++ PEKF G KGVL GPPG GKTLLAK
Sbjct: 475 PN--VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 532
Query: 266 AIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXX 325
AIA E F S+ G E + M+ G + VR++F+KA+ ++PC++F DE+D++
Sbjct: 533 AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNS 592
Query: 326 XXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPD 385
++ LNQLLTEMDG V +I ATNRP+I+DSAL RPGR D+ + + LPD
Sbjct: 593 AGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPD 652
Query: 386 IRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLK 445
R I K + KDV ++ +A T GFSGAD+ + A A R NI K
Sbjct: 653 EDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIRE---NIE-K 708
Query: 446 EIDDSIDRIV--AGMEGTKMTDGKNKILVAYHE 476
+I++ R ME + D ++I A+ E
Sbjct: 709 DIENERRRSQNPEAMEEDMVDDEVSEIRAAHFE 741
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 105/265 (39%), Positives = 157/265 (59%)
Query: 198 RSKAKFEMEPNTGVTFDDVAGVDEAKQDFQE-IVQFLQTPEKFAAVGAKIPKGVLLVGPP 256
R KA E+ + D+ G+D+ +D E IV + EKF +G K PKGVL+ GPP
Sbjct: 171 RVKA-MEVIEKPSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPP 229
Query: 257 GTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEID 316
GTGKTLLA+A A + F L+G + ++MF+G GA VRD FN AK +P ++FIDE+D
Sbjct: 230 GTGKTLLARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELD 289
Query: 317 AVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFD 376
A+ + E ++T+ +LL ++DGF+ + V VIAATNRP+ LD AL R GR D
Sbjct: 290 AIGTKRFDSELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLD 349
Query: 377 RQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
R++ + P+ R +IL++HS + KDV+ +A T F+GA L + EA ++A R
Sbjct: 350 RKIELPHPNEESRARILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALR 409
Query: 437 RGKANITLKEIDDSIDRIVAGMEGT 461
RG I ++ + I +++ + T
Sbjct: 410 RGATEIDHEDFVEGITSVLSKKKST 434
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 105/265 (39%), Positives = 157/265 (59%)
Query: 198 RSKAKFEMEPNTGVTFDDVAGVDEAKQDFQE-IVQFLQTPEKFAAVGAKIPKGVLLVGPP 256
R KA E+ + D+ G+D+ +D E IV + EKF +G K PKGVL+ GPP
Sbjct: 171 RVKA-MEVIEKPSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPP 229
Query: 257 GTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEID 316
GTGKTLLA+A A + F L+G + ++MF+G GA VRD FN AK +P ++FIDE+D
Sbjct: 230 GTGKTLLARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELD 289
Query: 317 AVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFD 376
A+ + E ++T+ +LL ++DGF+ + V VIAATNRP+ LD AL R GR D
Sbjct: 290 AIGTKRFDSELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLD 349
Query: 377 RQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
R++ + P+ R +IL++HS + KDV+ +A T F+GA L + EA ++A R
Sbjct: 350 RKIELPHPNEESRARILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALR 409
Query: 437 RGKANITLKEIDDSIDRIVAGMEGT 461
RG I ++ + I +++ + T
Sbjct: 410 RGATEIDHEDFVEGITSVLSKKKST 434
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 96/227 (42%), Positives = 140/227 (61%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
VT++D+ G+++ K++ QE+VQ+ ++ P+KF G KGVL GPPG GKTLLAKAIA
Sbjct: 206 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 265
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
E F S+ G E + M+ G + VR++F+KA+ +PC++F DE+D++
Sbjct: 266 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 325
Query: 330 NDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGR 389
++ +NQ+LTEMDG + V +I ATNRP+I+D A+ RPGR D+ + + LPD + R
Sbjct: 326 GGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 385
Query: 390 EQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
ILK + + KDV L +A T GFSGADL + A LA R
Sbjct: 386 VAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIR 432
Score = 336 (123.3 bits), Expect = 8.1e-28, P = 8.1e-28
Identities = 79/187 (42%), Positives = 108/187 (57%)
Query: 279 SGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXNDEREQTLN 338
SG E + G S +R F +A+ N+P ++FIDE+DA+ ER + ++
Sbjct: 2 SGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEV--ER-RIVS 58
Query: 339 QLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGREQILKVHSN 398
QLLT MDG + VIV+AATNRP +D AL R GRFDR+V +G+PD GR +IL++H+
Sbjct: 59 QLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTK 118
Query: 399 NKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDSIDRIVAGM 458
N KL DV L + T G GADLA L +EAA+ A R+ I L+ D++ID V
Sbjct: 119 NMKLADDVDLEQVGNETHGHVGADLAALCSEAALQAIRKKMDLIDLE--DETIDAEVMNS 176
Query: 459 EGTKMTD 465
M D
Sbjct: 177 LAVTMDD 183
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 94/245 (38%), Positives = 157/245 (64%)
Query: 212 TFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGE 270
T++ V G+D+ ++ +E+++ ++ PE F A+G PKGVLL GPPGTGKTLLA+A+A
Sbjct: 157 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLARAVAHH 216
Query: 271 AGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXN 330
F +SGSE ++ F+G GA VR+LF A+ ++P ++F+DEID++ +
Sbjct: 217 TECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSGGD 276
Query: 331 DEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGRE 390
E ++T+ +LL ++DGF + VI ATNR +ILD AL RPGR DR++ PD + R
Sbjct: 277 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPAPDEKARA 336
Query: 391 QILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDS 450
ILK+HS L + ++++ IA + PG SGA++ ++ EA + A R + ++T ++ + +
Sbjct: 337 DILKIHSRKMNLMRGINMAKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQEDFEMA 396
Query: 451 IDRIV 455
+ +++
Sbjct: 397 VGKVM 401
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 495 (179.3 bits), Expect = 9.5e-47, P = 9.5e-47
Identities = 107/260 (41%), Positives = 153/260 (58%)
Query: 207 PNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAK 265
P T T++D+ G++ K++ +E VQ+ ++ PEKF G + KGVL GPPG GKTLLAK
Sbjct: 470 PTT--TWEDIGGLEGVKRELRETVQYPVEHPEKFRKFGMQPSKGVLFYGPPGCGKTLLAK 527
Query: 266 AIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXX 325
AIA E F S+ G E + M+ G + VR+LF+KA+ +PC++F DE+D++
Sbjct: 528 AIANECQANFISIKGPELLTMWFGESEANVRELFDKARQAAPCVLFFDELDSIARSRGSS 587
Query: 326 XXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPD 385
++ +NQ+LTEMDG V +I ATNRP+I+D A+ RPGR D+ + + LPD
Sbjct: 588 QGDAGGAGDRVINQILTEMDGMNAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD 647
Query: 386 IRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLK 445
+ R ILK N + KDV L + +T GFSGADL + A LA R +I K
Sbjct: 648 LPSRVAILKACLNKSPVAKDVDLEFLGQKTQGFSGADLTEICQRACKLAIRE---SIE-K 703
Query: 446 EIDDSIDRIVAGMEGTKMTD 465
+I+ + R +G TKM D
Sbjct: 704 DIESTKARQESG--DTKMED 721
Score = 477 (173.0 bits), Expect = 9.2e-45, P = 9.2e-45
Identities = 103/254 (40%), Positives = 153/254 (60%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
V +DD+ GV + +E+V+ L+ P+ F +G K PKG+LL GPPG GKT++A+A+A
Sbjct: 199 VGYDDIGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGPPGCGKTMIARAVAN 258
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
E G FF ++G E + G S +R F +A+ N+P ++FIDEID++
Sbjct: 259 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTQGEV 318
Query: 330 NDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGR 389
ER + ++QLLT MDG + VIV+ ATNRP +D AL R GRFDR++ + +PD GR
Sbjct: 319 --ER-RIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDITIPDATGR 375
Query: 390 EQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDD 449
+I+++H+ N KLD+ V L +A T G+ GADLA L E+A+ R I L+ D+
Sbjct: 376 LEIMRIHTKNMKLDETVDLEAVANETHGYVGADLAALCTESALQCIREKMDVIDLE--DE 433
Query: 450 SID-RIVAGMEGTK 462
+I I+ M T+
Sbjct: 434 TISAEILESMSVTQ 447
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 462 (167.7 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 93/250 (37%), Positives = 148/250 (59%)
Query: 206 EPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLA 264
+P + V++ ++ G+ E ++ +E+++ L PE F VG PKG LL GPPGTGKTLLA
Sbjct: 126 DPGS-VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLA 184
Query: 265 KAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXX 324
+A+A + F + S ++ ++G A +R++FN A+ + PC++F+DEIDA+
Sbjct: 185 RAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFS 244
Query: 325 XXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLP 384
+ E ++TL +LL +MDGF V +I ATNRP+ LD AL RPGR DR++ + LP
Sbjct: 245 EGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIELP 304
Query: 385 DIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITL 444
+ + R ILK+HS D+ I + GF+GADL N+ EA + A R +T
Sbjct: 305 NEQARLDILKIHSGPITKHGDIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHEYVTQ 364
Query: 445 KEIDDSIDRI 454
++ ++ ++
Sbjct: 365 EDFMKAVRKV 374
Score = 44 (20.5 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 184 VNSPGGPNLPFGLGRSKAKFEMEPNTGVTFD 214
V + GP G R K +++P T V D
Sbjct: 71 VKATNGPRYVVGCRRQLDKSKLKPGTRVALD 101
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 455 (165.2 bits), Expect = 1.4e-46, Sum P(2) = 1.4e-46
Identities = 95/250 (38%), Positives = 145/250 (58%)
Query: 212 TFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGE 270
++ D+ G++ Q+ +E V+ L PE + +G K PKGV+L GPPGTGKTLLAKA+A E
Sbjct: 191 SYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANE 250
Query: 271 AGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXN 330
F + GSE I+ ++G G VR++F A+ ++P +VFIDEIDAV
Sbjct: 251 TSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEATSGGE 310
Query: 331 DEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGRE 390
E ++T+ +LL ++DGF V VI ATNR + LD AL RPGR DR++ + PD + +
Sbjct: 311 REIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTKR 370
Query: 391 QILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDS 450
+I ++H++ + DV L SGAD+ + EA +LA R + IT ++ +
Sbjct: 371 RIFQIHTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRERRMKITQADLRKA 430
Query: 451 IDRIVAGMEG 460
D+ + +G
Sbjct: 431 RDKALFQKKG 440
Score = 50 (22.7 bits), Expect = 1.4e-46, Sum P(2) = 1.4e-46
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 185 NSPGGPNLPFG-LGRSKAK 202
N+PGG N P+G LG+ + K
Sbjct: 3 NTPGGMNNPYGFLGKKEDK 21
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 455 (165.2 bits), Expect = 1.4e-46, Sum P(2) = 1.4e-46
Identities = 95/250 (38%), Positives = 145/250 (58%)
Query: 212 TFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGE 270
++ D+ G++ Q+ +E V+ L PE + +G K PKGV+L GPPGTGKTLLAKA+A E
Sbjct: 191 SYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANE 250
Query: 271 AGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXN 330
F + GSE I+ ++G G VR++F A+ ++P +VFIDEIDAV
Sbjct: 251 TSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEATSGGE 310
Query: 331 DEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGRE 390
E ++T+ +LL ++DGF V VI ATNR + LD AL RPGR DR++ + PD + +
Sbjct: 311 REIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTKR 370
Query: 391 QILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDS 450
+I ++H++ + DV L SGAD+ + EA +LA R + IT ++ +
Sbjct: 371 RIFQIHTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRERRMKITQADLRKA 430
Query: 451 IDRIVAGMEG 460
D+ + +G
Sbjct: 431 RDKALFQKKG 440
Score = 50 (22.7 bits), Expect = 1.4e-46, Sum P(2) = 1.4e-46
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 185 NSPGGPNLPFG-LGRSKAK 202
N+PGG N P+G LG+ + K
Sbjct: 3 NTPGGMNNPYGFLGKKEDK 21
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 490 (177.5 bits), Expect = 3.7e-46, P = 3.7e-46
Identities = 96/227 (42%), Positives = 140/227 (61%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
VT++D+ G+++ K++ QE+VQ+ ++ P+KF G KGVL GPPG GKTLLAKAIA
Sbjct: 472 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 531
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
E F S+ G E + M+ G + VR++F+KA+ +PC++F DE+D++
Sbjct: 532 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 591
Query: 330 NDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGR 389
++ +NQ+LTEMDG + V +I ATNRP+I+D A+ RPGR D+ + + LPD + R
Sbjct: 592 GGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 651
Query: 390 EQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
ILK + + KDV L +A T GFSGADL + A LA R
Sbjct: 652 VAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIR 698
Score = 433 (157.5 bits), Expect = 3.1e-38, P = 3.1e-38
Identities = 108/268 (40%), Positives = 147/268 (54%)
Query: 200 KAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGT 258
K + E E V +DD+ G + +E+V+ L+ P F A+G K P+G+LL GPPGT
Sbjct: 190 KREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 249
Query: 259 GKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAV 318
GKTL+A+A+A E G FF ++G E + G G S R K SP +
Sbjct: 250 GKTLIARAVANETGAFFFLINGPEIMSKLAGEGESACR------KKISPAPPPLKTAGIF 303
Query: 319 XXXXXXXXXXXNDEREQTL-NQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDR 377
+ E E+ + +QLLT MDG + VIV+AATNRP +D AL R GRFDR
Sbjct: 304 KSDDCFPSPQTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDR 363
Query: 378 QVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRR 437
+V +G+PD GR +IL++H+ N KL DV L +A T G GADLA L +EAA+ A R+
Sbjct: 364 EVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRK 423
Query: 438 GKANITLKEIDDSIDRIVAGMEGTKMTD 465
I L+ D++ID V M D
Sbjct: 424 KMDLIDLE--DETIDAEVMNSLAVTMDD 449
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
Identities = 99/254 (38%), Positives = 149/254 (58%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
+TFD + G+ E ++ +E+++ L+ PE F VG K PKGVLL GPPGTGKTLLAKA+A
Sbjct: 178 ITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAA 237
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
G F S ++ ++G A +R++F AK + PC++F+DE+DA+
Sbjct: 238 TIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSA 297
Query: 330 NDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGR 389
+ E ++TL +LLT+MDGF +I ATNRP+ LD AL RPGR DR+V + LP+ GR
Sbjct: 298 DREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGR 357
Query: 390 EQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDD 449
+I K+H+ K + + GF+GAD+ N EA A R + +I ++
Sbjct: 358 LEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHINPDDLMK 417
Query: 450 SIDRI--VAGMEGT 461
++ ++ V +EGT
Sbjct: 418 AVRKVAEVKKLEGT 431
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
Identities = 94/245 (38%), Positives = 154/245 (62%)
Query: 212 TFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGE 270
T++ + G+D+ ++ +E+++ ++ PE F A+G PKGVLL GPPGTGKTLLA+A+A
Sbjct: 153 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 212
Query: 271 AGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXN 330
F +SGSE ++ F+G GA VR+LF A+ ++P ++F+DEID++ +
Sbjct: 213 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGD 272
Query: 331 DEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGRE 390
E ++T+ +LL ++DGF + VI ATNR +ILDSAL RPGR DR++ P+ R
Sbjct: 273 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 332
Query: 391 QILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDS 450
ILK+HS L + ++L IA PG SGA++ + EA + A R + ++T ++ + +
Sbjct: 333 DILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMA 392
Query: 451 IDRIV 455
+ +++
Sbjct: 393 VAKVM 397
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
Identities = 94/245 (38%), Positives = 154/245 (62%)
Query: 212 TFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGE 270
T++ + G+D+ ++ +E+++ ++ PE F A+G PKGVLL GPPGTGKTLLA+A+A
Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206
Query: 271 AGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXN 330
F +SGSE ++ F+G GA VR+LF A+ ++P ++F+DEID++ +
Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGD 266
Query: 331 DEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGRE 390
E ++T+ +LL ++DGF + VI ATNR +ILDSAL RPGR DR++ P+ R
Sbjct: 267 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 326
Query: 391 QILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDS 450
ILK+HS L + ++L IA PG SGA++ + EA + A R + ++T ++ + +
Sbjct: 327 DILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMA 386
Query: 451 IDRIV 455
+ +++
Sbjct: 387 VAKVM 391
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
Identities = 94/245 (38%), Positives = 154/245 (62%)
Query: 212 TFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGE 270
T++ + G+D+ ++ +E+++ ++ PE F A+G PKGVLL GPPGTGKTLLA+A+A
Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206
Query: 271 AGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXN 330
F +SGSE ++ F+G GA VR+LF A+ ++P ++F+DEID++ +
Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGD 266
Query: 331 DEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGRE 390
E ++T+ +LL ++DGF + VI ATNR +ILDSAL RPGR DR++ P+ R
Sbjct: 267 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 326
Query: 391 QILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDS 450
ILK+HS L + ++L IA PG SGA++ + EA + A R + ++T ++ + +
Sbjct: 327 DILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMA 386
Query: 451 IDRIV 455
+ +++
Sbjct: 387 VAKVM 391
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
Identities = 94/245 (38%), Positives = 154/245 (62%)
Query: 212 TFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGE 270
T++ + G+D+ ++ +E+++ ++ PE F A+G PKGVLL GPPGTGKTLLA+A+A
Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206
Query: 271 AGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXN 330
F +SGSE ++ F+G GA VR+LF A+ ++P ++F+DEID++ +
Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGD 266
Query: 331 DEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGRE 390
E ++T+ +LL ++DGF + VI ATNR +ILDSAL RPGR DR++ P+ R
Sbjct: 267 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 326
Query: 391 QILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDS 450
ILK+HS L + ++L IA PG SGA++ + EA + A R + ++T ++ + +
Sbjct: 327 DILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMA 386
Query: 451 IDRIV 455
+ +++
Sbjct: 387 VAKVM 391
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
Identities = 94/245 (38%), Positives = 154/245 (62%)
Query: 212 TFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGE 270
T++ + G+D+ ++ +E+++ ++ PE F A+G PKGVLL GPPGTGKTLLA+A+A
Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206
Query: 271 AGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXN 330
F +SGSE ++ F+G GA VR+LF A+ ++P ++F+DEID++ +
Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGD 266
Query: 331 DEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGRE 390
E ++T+ +LL ++DGF + VI ATNR +ILDSAL RPGR DR++ P+ R
Sbjct: 267 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 326
Query: 391 QILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDS 450
ILK+HS L + ++L IA PG SGA++ + EA + A R + ++T ++ + +
Sbjct: 327 DILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMA 386
Query: 451 IDRIV 455
+ +++
Sbjct: 387 VAKVM 391
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
Identities = 94/245 (38%), Positives = 154/245 (62%)
Query: 212 TFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGE 270
T++ + G+D+ ++ +E+++ ++ PE F A+G PKGVLL GPPGTGKTLLA+A+A
Sbjct: 155 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 214
Query: 271 AGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXN 330
F +SGSE ++ F+G GA VR+LF A+ ++P ++F+DEID++ +
Sbjct: 215 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGD 274
Query: 331 DEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGRE 390
E ++T+ +LL ++DGF + VI ATNR +ILDSAL RPGR DR++ P+ R
Sbjct: 275 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 334
Query: 391 QILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDS 450
ILK+HS L + ++L IA PG SGA++ + EA + A R + ++T ++ + +
Sbjct: 335 DILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMA 394
Query: 451 IDRIV 455
+ +++
Sbjct: 395 VAKVM 399
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
Identities = 94/245 (38%), Positives = 154/245 (62%)
Query: 212 TFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGE 270
T++ + G+D+ ++ +E+++ ++ PE F A+G PKGVLL GPPGTGKTLLA+A+A
Sbjct: 155 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 214
Query: 271 AGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXN 330
F +SGSE ++ F+G GA VR+LF A+ ++P ++F+DEID++ +
Sbjct: 215 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGD 274
Query: 331 DEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGRE 390
E ++T+ +LL ++DGF + VI ATNR +ILDSAL RPGR DR++ P+ R
Sbjct: 275 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 334
Query: 391 QILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDS 450
ILK+HS L + ++L IA PG SGA++ + EA + A R + ++T ++ + +
Sbjct: 335 DILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMA 394
Query: 451 IDRIV 455
+ +++
Sbjct: 395 VAKVM 399
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
Identities = 94/245 (38%), Positives = 154/245 (62%)
Query: 212 TFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGE 270
T++ + G+D+ ++ +E+++ ++ PE F A+G PKGVLL GPPGTGKTLLA+A+A
Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206
Query: 271 AGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXN 330
F +SGSE ++ F+G GA VR+LF A+ ++P ++F+DEID++ +
Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGD 266
Query: 331 DEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGRE 390
E ++T+ +LL ++DGF + VI ATNR +ILDSAL RPGR DR++ P+ R
Sbjct: 267 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 326
Query: 391 QILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDS 450
ILK+HS L + ++L IA PG SGA++ + EA + A R + ++T ++ + +
Sbjct: 327 DILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMA 386
Query: 451 IDRIV 455
+ +++
Sbjct: 387 VAKVM 391
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
Identities = 94/245 (38%), Positives = 154/245 (62%)
Query: 212 TFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGE 270
T++ + G+D+ ++ +E+++ ++ PE F A+G PKGVLL GPPGTGKTLLA+A+A
Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206
Query: 271 AGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXN 330
F +SGSE ++ F+G GA VR+LF A+ ++P ++F+DEID++ +
Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGD 266
Query: 331 DEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGRE 390
E ++T+ +LL ++DGF + VI ATNR +ILDSAL RPGR DR++ P+ R
Sbjct: 267 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 326
Query: 391 QILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDS 450
ILK+HS L + ++L IA PG SGA++ + EA + A R + ++T ++ + +
Sbjct: 327 DILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMA 386
Query: 451 IDRIV 455
+ +++
Sbjct: 387 VAKVM 391
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
Identities = 94/245 (38%), Positives = 154/245 (62%)
Query: 212 TFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGE 270
T++ + G+D+ ++ +E+++ ++ PE F A+G PKGVLL GPPGTGKTLLA+A+A
Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206
Query: 271 AGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXN 330
F +SGSE ++ F+G GA VR+LF A+ ++P ++F+DEID++ +
Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGD 266
Query: 331 DEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGRE 390
E ++T+ +LL ++DGF + VI ATNR +ILDSAL RPGR DR++ P+ R
Sbjct: 267 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 326
Query: 391 QILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDS 450
ILK+HS L + ++L IA PG SGA++ + EA + A R + ++T ++ + +
Sbjct: 327 DILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMA 386
Query: 451 IDRIV 455
+ +++
Sbjct: 387 VAKVM 391
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 486 (176.1 bits), Expect = 1.1e-45, P = 1.1e-45
Identities = 105/244 (43%), Positives = 151/244 (61%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
V +DDV GV + +E+V+ L+ P+ F ++G K PKG+LL GPPG+GKTL+A+A+A
Sbjct: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
E G FF ++G E + G S +R F +A+ N+P ++FIDEID++
Sbjct: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEV 324
Query: 330 NDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGR 389
ER + ++QLLT MDG + VIV+ ATNRP +D AL R GRFDR++ +G+PD GR
Sbjct: 325 --ER-RIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGR 381
Query: 390 EQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITL--KEI 447
++L++H+ N KL +DV L ++ T G+ GADLA L EAA+ R I L +EI
Sbjct: 382 LEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVIDLDDEEI 441
Query: 448 DDSI 451
D I
Sbjct: 442 DAEI 445
Score = 481 (174.4 bits), Expect = 3.8e-45, P = 3.8e-45
Identities = 98/231 (42%), Positives = 137/231 (59%)
Query: 207 PNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAK 265
PN V+++D+ G++ K++ QE VQ+ ++ PEKF G KGVL GPPG GKTLLAK
Sbjct: 476 PN--VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 533
Query: 266 AIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXX 325
AIA E F S+ G E + M+ G + VR++F+KA+ ++PC++F DE+D++
Sbjct: 534 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNS 593
Query: 326 XXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPD 385
++ LNQLLTEMDG V +I ATNRP+I+D AL RPGR D+ + + LPD
Sbjct: 594 VGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPD 653
Query: 386 IRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
R QI K + KDV L +A T GFSGAD+ + + A R
Sbjct: 654 EESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADITEICQRSCKYAIR 704
>GENEDB_PFALCIPARUM|PF07_0047 [details] [associations]
symbol:PF07_0047 "cell division cycle ATPase,
putative" species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0016887 GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 PANTHER:PTHR23077:SF18
SMART:SM01073 EMBL:AL844506 EMBL:M96757 RefSeq:XP_001349023.1
ProteinModelPortal:P46468 IntAct:P46468 MINT:MINT-1593477
PRIDE:P46468 EnsemblProtists:PF07_0047:mRNA GeneID:2655095
KEGG:pfa:PF07_0047 EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 490 (177.5 bits), Expect = 1.5e-45, P = 1.5e-45
Identities = 97/221 (43%), Positives = 138/221 (62%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
VT++D+ G++E K+ +E + + L+ + + KG+LL GPPG GKTLLAKAIA
Sbjct: 931 VTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIAN 990
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
E F S+ G E + M+ G + VRDLF+KA+A SPC++F DEID++
Sbjct: 991 ECKANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKERNSNTN-- 1048
Query: 330 NDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGR 389
ND ++ +NQ+LTE+DG + +IAATNRP+ILD AL RPGR D+ + + LPD++ R
Sbjct: 1049 NDASDRVINQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKSR 1108
Query: 390 EQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEA 430
I K N L++DV + +A RT GFSGAD+ NL A
Sbjct: 1109 YSIFKAILKNTPLNEDVDIHDMAKRTEGFSGADITNLCQSA 1149
Score = 466 (169.1 bits), Expect = 2.2e-42, P = 2.2e-42
Identities = 95/228 (41%), Positives = 142/228 (62%)
Query: 206 EPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLA 264
E N +T++D+ G+ + +E+++ L+ PE F ++G PKGVL+ G PGTGKT +A
Sbjct: 519 ENNDDITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIA 578
Query: 265 KAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXX 324
KAIA E+ + ++G E + +G ++R +F KA +PC++FIDEID++
Sbjct: 579 KAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSK 638
Query: 325 XXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLP 384
N+ ++ ++QLLT MDG N+ V+V+AATNRP +D AL R GRFDR++ + +P
Sbjct: 639 SN---NELEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVP 695
Query: 385 DIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAI 432
D +GR +IL + KLD DV+L IA G+ GADLA L EAAI
Sbjct: 696 DEQGRYEILLTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFEAAI 743
>UNIPROTKB|P46468 [details] [associations]
symbol:PF07_0047 "Putative cell division cycle ATPase"
species:36329 "Plasmodium falciparum 3D7" [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016887
GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 PANTHER:PTHR23077:SF18 SMART:SM01073 EMBL:AL844506
EMBL:M96757 RefSeq:XP_001349023.1 ProteinModelPortal:P46468
IntAct:P46468 MINT:MINT-1593477 PRIDE:P46468
EnsemblProtists:PF07_0047:mRNA GeneID:2655095 KEGG:pfa:PF07_0047
EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 490 (177.5 bits), Expect = 1.5e-45, P = 1.5e-45
Identities = 97/221 (43%), Positives = 138/221 (62%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
VT++D+ G++E K+ +E + + L+ + + KG+LL GPPG GKTLLAKAIA
Sbjct: 931 VTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIAN 990
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
E F S+ G E + M+ G + VRDLF+KA+A SPC++F DEID++
Sbjct: 991 ECKANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKERNSNTN-- 1048
Query: 330 NDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGR 389
ND ++ +NQ+LTE+DG + +IAATNRP+ILD AL RPGR D+ + + LPD++ R
Sbjct: 1049 NDASDRVINQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKSR 1108
Query: 390 EQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEA 430
I K N L++DV + +A RT GFSGAD+ NL A
Sbjct: 1109 YSIFKAILKNTPLNEDVDIHDMAKRTEGFSGADITNLCQSA 1149
Score = 466 (169.1 bits), Expect = 2.2e-42, P = 2.2e-42
Identities = 95/228 (41%), Positives = 142/228 (62%)
Query: 206 EPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLA 264
E N +T++D+ G+ + +E+++ L+ PE F ++G PKGVL+ G PGTGKT +A
Sbjct: 519 ENNDDITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIA 578
Query: 265 KAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXX 324
KAIA E+ + ++G E + +G ++R +F KA +PC++FIDEID++
Sbjct: 579 KAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSK 638
Query: 325 XXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLP 384
N+ ++ ++QLLT MDG N+ V+V+AATNRP +D AL R GRFDR++ + +P
Sbjct: 639 SN---NELEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVP 695
Query: 385 DIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAI 432
D +GR +IL + KLD DV+L IA G+ GADLA L EAAI
Sbjct: 696 DEQGRYEILLTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFEAAI 743
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 92/245 (37%), Positives = 154/245 (62%)
Query: 212 TFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGE 270
T+D + G+D+ ++ +E+++ L+ PE F ++G PKGVLL GPPGTGKTLLA+A+A
Sbjct: 130 TYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 189
Query: 271 AGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXN 330
F +SGSE ++ ++G G+ VR+LF A+ ++P ++F+DEID++ +
Sbjct: 190 TDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIDSAGSGD 249
Query: 331 DEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGRE 390
E ++T+ +LL ++DGF + +I ATNR +ILD AL RPGR DR++ P + R
Sbjct: 250 SEVQRTMLELLNQLDGFEPTKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVEARA 309
Query: 391 QILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDS 450
IL++HS + L + ++L+ IA + G SGA+L + EA + A R + ++T ++ D +
Sbjct: 310 DILRIHSRSMNLTRGINLTKIAEKMNGCSGAELKGVCTEAGMYALRERRVHVTQEDFDLA 369
Query: 451 IDRIV 455
+I+
Sbjct: 370 TAKIL 374
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 102/258 (39%), Positives = 151/258 (58%)
Query: 199 SKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPG 257
S K E P T+ DV G+D+ Q+ +E V+ L PE + +G + PKGV+L G PG
Sbjct: 175 SVMKLEKAPQE--TYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPG 232
Query: 258 TGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDA 317
TGKTLLAKA+A + F + GSE I+ ++G G VR+LF A+ N+P +VFIDEIDA
Sbjct: 233 TGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDA 292
Query: 318 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDR 377
V E ++T+ +LL ++DGF V V+ ATNR E LD AL RPGR DR
Sbjct: 293 VGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDR 352
Query: 378 QVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRR 437
++ LPD + + +I ++H++ L K+V+L T SGAD+ + EA +LA R
Sbjct: 353 KIEFPLPDEKTKRRIFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRE 412
Query: 438 GKANITLKEIDDSIDRIV 455
+ +T+++ S + ++
Sbjct: 413 RRMRVTMEDFQKSKENVL 430
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 450 (163.5 bits), Expect = 2.0e-45, Sum P(2) = 2.0e-45
Identities = 89/227 (39%), Positives = 137/227 (60%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
V++ ++ G+ E ++ +E+++ L PE F VG PKG LL GPPGTGKTLLA+A+A
Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
+ F + S ++ ++G A +R++FN A+ + PC++F+DEIDA+
Sbjct: 190 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 249
Query: 330 NDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGR 389
+ E ++TL +LL +MDGF V +I ATNRP+ LD AL RPGR DR++ + LP+ + R
Sbjct: 250 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQAR 309
Query: 390 EQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
ILK+H+ ++ I + GF+GADL N+ EA + A R
Sbjct: 310 LDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLGNVCTEAGMFAIR 356
Score = 44 (20.5 bits), Expect = 2.0e-45, Sum P(2) = 2.0e-45
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 184 VNSPGGPNLPFGLGRSKAKFEMEPNTGVTFD 214
V + GP G R K +++P T V D
Sbjct: 71 VKATNGPRYVVGCRRQLDKSKLKPGTRVALD 101
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 449 (163.1 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 89/227 (39%), Positives = 137/227 (60%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
V++ ++ G+ E ++ +E+++ L PE F VG PKG LL GPPGTGKTLLA+A+A
Sbjct: 144 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 203
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
+ F + S ++ ++G A +R++FN A+ + PC++F+DEIDA+
Sbjct: 204 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 263
Query: 330 NDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGR 389
+ E ++TL +LL +MDGF V +I ATNRP+ LD AL RPGR DR++ + LP+ + R
Sbjct: 264 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQAR 323
Query: 390 EQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
ILK+H+ ++ I + GF+GADL N+ EA + A R
Sbjct: 324 LDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIR 370
Score = 44 (20.5 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 184 VNSPGGPNLPFGLGRSKAKFEMEPNTGVTFD 214
V + GP G R K +++P T V D
Sbjct: 85 VKATNGPRYVVGCRRQLDKSKLKPGTRVALD 115
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 449 (163.1 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 89/227 (39%), Positives = 137/227 (60%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
V++ ++ G+ E ++ +E+++ L PE F VG PKG LL GPPGTGKTLLA+A+A
Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
+ F + S ++ ++G A +R++FN A+ + PC++F+DEIDA+
Sbjct: 190 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 249
Query: 330 NDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGR 389
+ E ++TL +LL +MDGF V +I ATNRP+ LD AL RPGR DR++ + LP+ + R
Sbjct: 250 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQAR 309
Query: 390 EQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
ILK+H+ ++ I + GF+GADL N+ EA + A R
Sbjct: 310 LDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIR 356
Score = 44 (20.5 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 184 VNSPGGPNLPFGLGRSKAKFEMEPNTGVTFD 214
V + GP G R K +++P T V D
Sbjct: 71 VKATNGPRYVVGCRRQLDKSKLKPGTRVALD 101
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 449 (163.1 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 89/227 (39%), Positives = 137/227 (60%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
V++ ++ G+ E ++ +E+++ L PE F VG PKG LL GPPGTGKTLLA+A+A
Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
+ F + S ++ ++G A +R++FN A+ + PC++F+DEIDA+
Sbjct: 190 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 249
Query: 330 NDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGR 389
+ E ++TL +LL +MDGF V +I ATNRP+ LD AL RPGR DR++ + LP+ + R
Sbjct: 250 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQAR 309
Query: 390 EQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
ILK+H+ ++ I + GF+GADL N+ EA + A R
Sbjct: 310 LDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIR 356
Score = 44 (20.5 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 184 VNSPGGPNLPFGLGRSKAKFEMEPNTGVTFD 214
V + GP G R K +++P T V D
Sbjct: 71 VKATNGPRYVVGCRRQLDKSKLKPGTRVALD 101
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 449 (163.1 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 89/227 (39%), Positives = 137/227 (60%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
V++ ++ G+ E ++ +E+++ L PE F VG PKG LL GPPGTGKTLLA+A+A
Sbjct: 136 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 195
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
+ F + S ++ ++G A +R++FN A+ + PC++F+DEIDA+
Sbjct: 196 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 255
Query: 330 NDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGR 389
+ E ++TL +LL +MDGF V +I ATNRP+ LD AL RPGR DR++ + LP+ + R
Sbjct: 256 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQAR 315
Query: 390 EQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
ILK+H+ ++ I + GF+GADL N+ EA + A R
Sbjct: 316 LDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIR 362
Score = 44 (20.5 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 184 VNSPGGPNLPFGLGRSKAKFEMEPNTGVTFD 214
V + GP G R K +++P T V D
Sbjct: 77 VKATNGPRYVVGCRRQLDKSKLKPGTRVALD 107
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 449 (163.1 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 89/227 (39%), Positives = 137/227 (60%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
V++ ++ G+ E ++ +E+++ L PE F VG PKG LL GPPGTGKTLLA+A+A
Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
+ F + S ++ ++G A +R++FN A+ + PC++F+DEIDA+
Sbjct: 190 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 249
Query: 330 NDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGR 389
+ E ++TL +LL +MDGF V +I ATNRP+ LD AL RPGR DR++ + LP+ + R
Sbjct: 250 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQAR 309
Query: 390 EQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
ILK+H+ ++ I + GF+GADL N+ EA + A R
Sbjct: 310 LDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIR 356
Score = 44 (20.5 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 184 VNSPGGPNLPFGLGRSKAKFEMEPNTGVTFD 214
V + GP G R K +++P T V D
Sbjct: 71 VKATNGPRYVVGCRRQLDKSKLKPGTRVALD 101
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 449 (163.1 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 89/227 (39%), Positives = 137/227 (60%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
V++ ++ G+ E ++ +E+++ L PE F VG PKG LL GPPGTGKTLLA+A+A
Sbjct: 144 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 203
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
+ F + S ++ ++G A +R++FN A+ + PC++F+DEIDA+
Sbjct: 204 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 263
Query: 330 NDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGR 389
+ E ++TL +LL +MDGF V +I ATNRP+ LD AL RPGR DR++ + LP+ + R
Sbjct: 264 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQAR 323
Query: 390 EQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
ILK+H+ ++ I + GF+GADL N+ EA + A R
Sbjct: 324 LDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIR 370
Score = 44 (20.5 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 184 VNSPGGPNLPFGLGRSKAKFEMEPNTGVTFD 214
V + GP G R K +++P T V D
Sbjct: 85 VKATNGPRYVVGCRRQLDKSKLKPGTRVALD 115
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 449 (163.1 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 89/227 (39%), Positives = 137/227 (60%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
V++ ++ G+ E ++ +E+++ L PE F VG PKG LL GPPGTGKTLLA+A+A
Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
+ F + S ++ ++G A +R++FN A+ + PC++F+DEIDA+
Sbjct: 190 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 249
Query: 330 NDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGR 389
+ E ++TL +LL +MDGF V +I ATNRP+ LD AL RPGR DR++ + LP+ + R
Sbjct: 250 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQAR 309
Query: 390 EQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
ILK+H+ ++ I + GF+GADL N+ EA + A R
Sbjct: 310 LDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIR 356
Score = 44 (20.5 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 184 VNSPGGPNLPFGLGRSKAKFEMEPNTGVTFD 214
V + GP G R K +++P T V D
Sbjct: 71 VKATNGPRYVVGCRRQLDKSKLKPGTRVALD 101
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 449 (163.1 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 89/227 (39%), Positives = 137/227 (60%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
V++ ++ G+ E ++ +E+++ L PE F VG PKG LL GPPGTGKTLLA+A+A
Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
+ F + S ++ ++G A +R++FN A+ + PC++F+DEIDA+
Sbjct: 190 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 249
Query: 330 NDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGR 389
+ E ++TL +LL +MDGF V +I ATNRP+ LD AL RPGR DR++ + LP+ + R
Sbjct: 250 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQAR 309
Query: 390 EQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
ILK+H+ ++ I + GF+GADL N+ EA + A R
Sbjct: 310 LDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIR 356
Score = 44 (20.5 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 184 VNSPGGPNLPFGLGRSKAKFEMEPNTGVTFD 214
V + GP G R K +++P T V D
Sbjct: 71 VKATNGPRYVVGCRRQLDKSKLKPGTRVALD 101
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 449 (163.1 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 89/227 (39%), Positives = 137/227 (60%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
V++ ++ G+ E ++ +E+++ L PE F VG PKG LL GPPGTGKTLLA+A+A
Sbjct: 122 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 181
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
+ F + S ++ ++G A +R++FN A+ + PC++F+DEIDA+
Sbjct: 182 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 241
Query: 330 NDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGR 389
+ E ++TL +LL +MDGF V +I ATNRP+ LD AL RPGR DR++ + LP+ + R
Sbjct: 242 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQAR 301
Query: 390 EQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
ILK+H+ ++ I + GF+GADL N+ EA + A R
Sbjct: 302 LDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIR 348
Score = 44 (20.5 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 184 VNSPGGPNLPFGLGRSKAKFEMEPNTGVTFD 214
V + GP G R K +++P T V D
Sbjct: 63 VKATNGPRYVVGCRRQLDKSKLKPGTRVALD 93
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 449 (163.1 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 89/227 (39%), Positives = 137/227 (60%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
V++ ++ G+ E ++ +E+++ L PE F VG PKG LL GPPGTGKTLLA+A+A
Sbjct: 144 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 203
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
+ F + S ++ ++G A +R++FN A+ + PC++F+DEIDA+
Sbjct: 204 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 263
Query: 330 NDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGR 389
+ E ++TL +LL +MDGF V +I ATNRP+ LD AL RPGR DR++ + LP+ + R
Sbjct: 264 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQAR 323
Query: 390 EQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
ILK+H+ ++ I + GF+GADL N+ EA + A R
Sbjct: 324 LDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIR 370
Score = 44 (20.5 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 184 VNSPGGPNLPFGLGRSKAKFEMEPNTGVTFD 214
V + GP G R K +++P T V D
Sbjct: 85 VKATNGPRYVVGCRRQLDKSKLKPGTRVALD 115
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 99/260 (38%), Positives = 153/260 (58%)
Query: 198 RSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQT-PEKFAAVGAKIPKGVLLVGPP 256
R KA E++ ++D+ G+++ Q+ E + T E+F +G + PKGVLL GPP
Sbjct: 156 RVKA-MEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPP 214
Query: 257 GTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEID 316
GTGKTL+A+A A + F L+G + ++MF+G GA VRD F AK +PC++FIDEID
Sbjct: 215 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEID 274
Query: 317 AVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFD 376
A+ + E ++T+ +LL ++DGF+ + + VIAATNR +ILD AL R GR D
Sbjct: 275 AIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLD 334
Query: 377 RQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
R++ P R +IL++HS + DV+ +A T F+GA L + EA +LA R
Sbjct: 335 RKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 394
Query: 437 RGKANITLKEIDDSIDRIVA 456
R + ++ ++ I ++ A
Sbjct: 395 RDATEVNHEDFNEGIIQVQA 414
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
Identities = 90/246 (36%), Positives = 156/246 (63%)
Query: 212 TFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGE 270
T+D V G+D+ ++ +E+++ ++ PE F ++G PKGV+L GPPGTGKTLLA+A+A
Sbjct: 142 TYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHH 201
Query: 271 AGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXN 330
F +SGSE ++ ++G G+ VR+LF A+ ++P ++F+DEID++ +
Sbjct: 202 TECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSGGD 261
Query: 331 DEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGRE 390
E ++T+ +LL ++DGF + + +I ATNR +ILD AL RPGR DR++ P + R
Sbjct: 262 SEVQRTMLELLNQLDGFESSKDIKIIMATNRLDILDPALLRPGRIDRKIEFPAPTVAART 321
Query: 391 QILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDS 450
ILK+HS + L + ++L IA + G SGAD+ + EA + A R + ++T ++ + +
Sbjct: 322 DILKIHSRSMNLTRGINLRKIAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFELA 381
Query: 451 IDRIVA 456
+ ++++
Sbjct: 382 VAKVMS 387
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
Identities = 101/258 (39%), Positives = 152/258 (58%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
V++ ++ G+ ++ +E+V+ L PE F VG K PKGVLL GPPGTGKTLLA+AIA
Sbjct: 134 VSYGEIGGLSNQIRELREVVELPLMIPELFIRVGIKAPKGVLLYGPPGTGKTLLARAIAS 193
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
F + S ++ ++G A +R++F A+ + PC++F+DEIDA+
Sbjct: 194 NLEANFLKVVSSAIVDKYIGESARVIREMFGYARDHQPCVIFMDEIDAIGGRRFSEGTSA 253
Query: 330 NDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGR 389
+ E ++TL +LL +MDGF S V +I ATNRP++LD AL RPGR DR++ + LP+ GR
Sbjct: 254 DREIQRTLMELLNQMDGFDTLSKVKIIMATNRPDVLDPALLRPGRLDRKIEIPLPNEAGR 313
Query: 390 EQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDD 449
+LK+H+ N DV IA GF+ ADL N+ EA + A R + + ++E D
Sbjct: 314 VDVLKIHAANITKHGDVDYEAIAKLADGFNAADLRNVCTEAGMFA-IRAERDYVMEE--D 370
Query: 450 SIDRIVAGMEGTKMTDGK 467
+ + E K+ +GK
Sbjct: 371 FMKAVRKCQEAKKL-EGK 387
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
Identities = 100/260 (38%), Positives = 154/260 (59%)
Query: 198 RSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQT-PEKFAAVGAKIPKGVLLVGPP 256
R KA E++ ++D+ G+++ Q+ E + T E+F +G + PKGVLL GPP
Sbjct: 155 RVKA-MEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPP 213
Query: 257 GTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEID 316
GTGKTL+A+A A + F L+G + ++MF+G GA VRD F AK SPC++FIDEID
Sbjct: 214 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEID 273
Query: 317 AVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFD 376
A+ + E ++T+ +LL ++DGF+ + + VIAATNR +ILD AL R GR D
Sbjct: 274 AIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLD 333
Query: 377 RQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
R++ P R +IL++HS ++ DV+ +A T F+GA L + EA +LA R
Sbjct: 334 RKIEFPHPTEEARGRILQIHSRKMNVNADVNFEELARSTDDFNGAQLKAVCVEAGMLALR 393
Query: 437 RGKANITLKEIDDSIDRIVA 456
R + ++ ++ I ++ A
Sbjct: 394 RDATEVNHEDFNEGIIQVQA 413
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 480 (174.0 bits), Expect = 5.3e-45, P = 5.3e-45
Identities = 104/247 (42%), Positives = 149/247 (60%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
+ +DD+ G + +E+++ L+ P F +G K P+GVLL GPPG+GKT +A+A+A
Sbjct: 204 IGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVAN 263
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
E G FF ++G E + G + +R F +A+ NSP ++FIDEID++
Sbjct: 264 ETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKREKT---- 319
Query: 330 NDEREQ-TLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRG 388
N E E+ ++QLLT MDG V+VIAATNR +D AL R GRFDR++ +G+PD G
Sbjct: 320 NGEVERRVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNG 379
Query: 389 REQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEID 448
R +IL++H+ N KL DV L +A+ T GF GADLA L EAA+ R I L+ D
Sbjct: 380 RFEILRIHTKNMKLSPDVKLEELASNTHGFVGADLAQLCTEAALTCIREKMDVIDLE--D 437
Query: 449 DSIDRIV 455
+ ID+ V
Sbjct: 438 EIIDKEV 444
Score = 460 (167.0 bits), Expect = 9.7e-42, P = 9.7e-42
Identities = 95/231 (41%), Positives = 137/231 (59%)
Query: 207 PNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAK 265
PN V +DD+ G+DE K +E++ + + P+KF G +GVL GPPG GKTLLAK
Sbjct: 475 PN--VKWDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAK 532
Query: 266 AIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXX 325
A+A E F S+ G E + M+ G + VR++F+KA+A +PC++F DE+D++
Sbjct: 533 AVASECSANFVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRGSS 592
Query: 326 XXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPD 385
+ ++ +NQLLTE+DG + I ATNRPE+LD AL RPGR D+ + + LPD
Sbjct: 593 LGDGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPLPD 652
Query: 386 IRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
+ R IL + ++V + +A +T GFSGADLA L AA A R
Sbjct: 653 LGARISILTAILRKCPVAENVPIDFLAQKTAGFSGADLAELCQRAARAAIR 703
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 480 (174.0 bits), Expect = 5.3e-45, P = 5.3e-45
Identities = 104/247 (42%), Positives = 149/247 (60%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
+ +DD+ G + +E+++ L+ P F +G K P+GVLL GPPG+GKT +A+A+A
Sbjct: 204 IGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVAN 263
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
E G FF ++G E + G + +R F +A+ NSP ++FIDEID++
Sbjct: 264 ETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKREKT---- 319
Query: 330 NDEREQ-TLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRG 388
N E E+ ++QLLT MDG V+VIAATNR +D AL R GRFDR++ +G+PD G
Sbjct: 320 NGEVERRVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNG 379
Query: 389 REQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEID 448
R +IL++H+ N KL DV L +A+ T GF GADLA L EAA+ R I L+ D
Sbjct: 380 RFEILRIHTKNMKLSPDVKLEELASNTHGFVGADLAQLCTEAALTCIREKMDVIDLE--D 437
Query: 449 DSIDRIV 455
+ ID+ V
Sbjct: 438 EIIDKEV 444
Score = 460 (167.0 bits), Expect = 9.7e-42, P = 9.7e-42
Identities = 95/231 (41%), Positives = 137/231 (59%)
Query: 207 PNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAK 265
PN V +DD+ G+DE K +E++ + + P+KF G +GVL GPPG GKTLLAK
Sbjct: 475 PN--VKWDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAK 532
Query: 266 AIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXX 325
A+A E F S+ G E + M+ G + VR++F+KA+A +PC++F DE+D++
Sbjct: 533 AVASECSANFVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRGSS 592
Query: 326 XXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPD 385
+ ++ +NQLLTE+DG + I ATNRPE+LD AL RPGR D+ + + LPD
Sbjct: 593 LGDGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPLPD 652
Query: 386 IRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
+ R IL + ++V + +A +T GFSGADLA L AA A R
Sbjct: 653 LGARISILTAILRKCPVAENVPIDFLAQKTAGFSGADLAELCQRAARAAIR 703
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 104/262 (39%), Positives = 152/262 (58%)
Query: 202 KFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGK 260
K E P T+ D+ G+D Q+ +E V+ L PE + +G K PKGV+L GPPGTGK
Sbjct: 174 KLEKAPQE--TYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGK 231
Query: 261 TLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXX 320
TLLAKA+A + F + GSE I+ ++G G VR+LF A+ ++P +VFIDEIDAV
Sbjct: 232 TLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGT 291
Query: 321 XXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVS 380
E ++T+ +LL ++DGF V VI ATNR E LD AL RPGR DR++
Sbjct: 292 KRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIE 351
Query: 381 VGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKA 440
LPD + + +I +H++ L +DV+LS + SGAD+ + EA ++A R +
Sbjct: 352 FPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRM 411
Query: 441 NITLKEIDDSIDRIV-AGMEGT 461
+T ++ S + ++ EGT
Sbjct: 412 KVTNEDFKKSKESVLYRKKEGT 433
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 93/245 (37%), Positives = 153/245 (62%)
Query: 212 TFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGE 270
T++ V G+D+ ++ +E+++ ++ PE F A+G PKGVLL GPPGTGKTLLA+A+A
Sbjct: 146 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 205
Query: 271 AGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXN 330
F +SGSE ++ F+G G+ VR+LF A+ ++P ++F+DEID++ +
Sbjct: 206 TECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGD 265
Query: 331 DEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGRE 390
E ++T+ +LL ++DGF + VI ATNR +ILD AL RPGR DR++ P+ R
Sbjct: 266 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARL 325
Query: 391 QILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDS 450
ILK+HS L + ++L IA PG SGA++ + EA + A R + ++T ++ + +
Sbjct: 326 DILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMA 385
Query: 451 IDRIV 455
+ +++
Sbjct: 386 VAKVM 390
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 93/245 (37%), Positives = 153/245 (62%)
Query: 212 TFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGE 270
T++ V G+D+ Q+ +E+++ ++ PE F A+G PKGVLL GPPGTGKTLLA+A+A
Sbjct: 141 TYEMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVAHH 200
Query: 271 AGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXN 330
F +SGSE ++ F+G G+ VR+LF A+ ++P ++F+DEID++ +
Sbjct: 201 TECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARLETGTG-D 259
Query: 331 DEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGRE 390
E ++T+ +LL ++DGF + VI ATNR ++LD AL RPGR DR++ P+ R
Sbjct: 260 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDVLDQALLRPGRIDRKIEFPPPNEEARL 319
Query: 391 QILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDS 450
ILK+HS L + ++L IA PG SGA++ + EA + A R + ++T ++ + +
Sbjct: 320 DILKIHSRKMNLTRGINLRKIAEEMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMA 379
Query: 451 IDRIV 455
+ +++
Sbjct: 380 VSKVM 384
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 94/245 (38%), Positives = 154/245 (62%)
Query: 212 TFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGE 270
T++ + G+D+ ++ +E+++ ++ PE F A+G PKGVLL GPPGTGKTLLA+A+A
Sbjct: 142 TYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 201
Query: 271 AGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXN 330
F +SGSE ++ F+G GA VR+LF A+ ++P ++F+DEID++ +
Sbjct: 202 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSRLEGGSGG-D 260
Query: 331 DEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGRE 390
E ++T+ +LL ++DGF + VI ATNR +ILDSAL RPGR DR++ P+ R
Sbjct: 261 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 320
Query: 391 QILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDS 450
ILK+HS L + ++L IA PG SGA++ + EA + A R + ++T ++ + +
Sbjct: 321 DILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMA 380
Query: 451 IDRIV 455
+ +++
Sbjct: 381 VAKVM 385
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 95/254 (37%), Positives = 151/254 (59%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
++F V G++E ++ +E+++ L+ PE F VG K PKGVLL GPPGTGKTLLA+A+A
Sbjct: 129 ISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAA 188
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
GV F + S ++ ++G A +R++F AK + PC++F+DEIDA+
Sbjct: 189 SLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGTSA 248
Query: 330 NDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGR 389
+ E ++TL +LL +MDGF +I ATNRP+ LD AL RPGR DR++ + LP+ GR
Sbjct: 249 DREIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGR 308
Query: 390 EQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDD 449
+ILK+H ++ + T G +GADL N++ EA +A + + + ++
Sbjct: 309 MEILKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKEDRDYVIQSDLMS 368
Query: 450 SIDRI--VAGMEGT 461
+ ++ + +EGT
Sbjct: 369 AARKVADLKKLEGT 382
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 102/262 (38%), Positives = 152/262 (58%)
Query: 202 KFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGK 260
K E P T+ D+ G+D Q+ +E V+ L PE + +G K PKGV+L GPPGTGK
Sbjct: 174 KVEKAPQE--TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGK 231
Query: 261 TLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXX 320
TLLAKA+A + F + GSE I+ ++G G VR+LF A+ ++P +VFIDEIDA+
Sbjct: 232 TLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGT 291
Query: 321 XXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVS 380
E ++T+ +LL ++DGF V VI ATNR E LD AL RPGR DR++
Sbjct: 292 KRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIE 351
Query: 381 VGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKA 440
LPD + +++I ++H++ L DV+L + SGAD+ + EA ++A R +
Sbjct: 352 FPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRM 411
Query: 441 NITLKEIDDSIDRIV-AGMEGT 461
+T ++ S + ++ EGT
Sbjct: 412 KVTNEDFKKSKENVLYKKQEGT 433
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 102/262 (38%), Positives = 152/262 (58%)
Query: 202 KFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGK 260
K E P T+ D+ G+D Q+ +E V+ L PE + +G K PKGV+L GPPGTGK
Sbjct: 173 KVEKAPQE--TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGK 230
Query: 261 TLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXX 320
TLLAKA+A + F + GSE I+ ++G G VR+LF A+ ++P +VFIDEIDA+
Sbjct: 231 TLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGT 290
Query: 321 XXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVS 380
E ++T+ +LL ++DGF V VI ATNR E LD AL RPGR DR++
Sbjct: 291 KRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIE 350
Query: 381 VGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKA 440
LPD + +++I ++H++ L DV+L + SGAD+ + EA ++A R +
Sbjct: 351 FPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRM 410
Query: 441 NITLKEIDDSIDRIV-AGMEGT 461
+T ++ S + ++ EGT
Sbjct: 411 KVTNEDFKKSKENVLYKKQEGT 432
>WB|WBGene00004505 [details] [associations]
symbol:rpt-5 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:FO080337
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371
SMR:O76371 IntAct:O76371 MINT:MINT-211164 STRING:O76371
PaxDb:O76371 EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2
GeneID:172238 KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238
WormBase:F56H1.4 InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 449 (163.1 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 96/260 (36%), Positives = 151/260 (58%)
Query: 198 RSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQT-PEKFAAVGAKIPKGVLLVGPP 256
R KA E++ + D+ G D+ Q+ E V T ++F +G PKGVL+ GPP
Sbjct: 162 RVKA-MEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPP 220
Query: 257 GTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEID 316
GTGKT++A+A+A + F L+G + ++MF+G GA VRD F AK +P ++FIDE+D
Sbjct: 221 GTGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELD 280
Query: 317 AVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFD 376
A+ + E ++T+ +LL ++DGF N + VIAATNR ++LD AL R GR D
Sbjct: 281 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGRLD 340
Query: 377 RQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
R++ + P+ R +I+++HS ++KDV+ +A T F+GA + EA ++A R
Sbjct: 341 RKIELPHPNEDARARIMQIHSRKMNVNKDVNFEELARCTDDFNGAQCKAVCVEAGMIALR 400
Query: 437 RGKANITLKEIDDSIDRIVA 456
R I ++ D+I + A
Sbjct: 401 RDATEILHEDFMDAILEVQA 420
Score = 38 (18.4 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 70 STEPESPIEYTSNRMTYSRFLQYLDEGSVKKVDLFEN 106
+T + I+ + R+ ++ L YL V+ +DL +N
Sbjct: 59 ATTLKERIKENTERIKVNKTLPYLVSNVVELLDLEDN 95
>UNIPROTKB|O76371 [details] [associations]
symbol:rpt-5 "Protein RPT-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
GeneTree:ENSGT00560000077230 EMBL:FO080337 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371 SMR:O76371
IntAct:O76371 MINT:MINT-211164 STRING:O76371 PaxDb:O76371
EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2 GeneID:172238
KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238 WormBase:F56H1.4
InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 449 (163.1 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 96/260 (36%), Positives = 151/260 (58%)
Query: 198 RSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQT-PEKFAAVGAKIPKGVLLVGPP 256
R KA E++ + D+ G D+ Q+ E V T ++F +G PKGVL+ GPP
Sbjct: 162 RVKA-MEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPP 220
Query: 257 GTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEID 316
GTGKT++A+A+A + F L+G + ++MF+G GA VRD F AK +P ++FIDE+D
Sbjct: 221 GTGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELD 280
Query: 317 AVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFD 376
A+ + E ++T+ +LL ++DGF N + VIAATNR ++LD AL R GR D
Sbjct: 281 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGRLD 340
Query: 377 RQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
R++ + P+ R +I+++HS ++KDV+ +A T F+GA + EA ++A R
Sbjct: 341 RKIELPHPNEDARARIMQIHSRKMNVNKDVNFEELARCTDDFNGAQCKAVCVEAGMIALR 400
Query: 437 RGKANITLKEIDDSIDRIVA 456
R I ++ D+I + A
Sbjct: 401 RDATEILHEDFMDAILEVQA 420
Score = 38 (18.4 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 70 STEPESPIEYTSNRMTYSRFLQYLDEGSVKKVDLFEN 106
+T + I+ + R+ ++ L YL V+ +DL +N
Sbjct: 59 ATTLKERIKENTERIKVNKTLPYLVSNVVELLDLEDN 95
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 102/262 (38%), Positives = 152/262 (58%)
Query: 202 KFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGK 260
K E P T+ D+ G+D Q+ +E V+ L PE + +G K PKGV+L GPPGTGK
Sbjct: 175 KVEKAPQE--TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGK 232
Query: 261 TLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXX 320
TLLAKA+A + F + GSE I+ ++G G VR+LF A+ ++P +VFIDEIDA+
Sbjct: 233 TLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGT 292
Query: 321 XXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVS 380
E ++T+ +LL ++DGF V VI ATNR E LD AL RPGR DR++
Sbjct: 293 KRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIE 352
Query: 381 VGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKA 440
LPD + +++I ++H++ L DV+L + SGAD+ + EA ++A R +
Sbjct: 353 FPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRM 412
Query: 441 NITLKEIDDSIDRIV-AGMEGT 461
+T ++ S + ++ EGT
Sbjct: 413 KVTNEDFKKSKENVLYKKQEGT 434
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 102/262 (38%), Positives = 152/262 (58%)
Query: 202 KFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGK 260
K E P T+ D+ G+D Q+ +E V+ L PE + +G K PKGV+L GPPGTGK
Sbjct: 175 KVEKAPQE--TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGK 232
Query: 261 TLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXX 320
TLLAKA+A + F + GSE I+ ++G G VR+LF A+ ++P +VFIDEIDA+
Sbjct: 233 TLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGT 292
Query: 321 XXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVS 380
E ++T+ +LL ++DGF V VI ATNR E LD AL RPGR DR++
Sbjct: 293 KRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIE 352
Query: 381 VGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKA 440
LPD + +++I ++H++ L DV+L + SGAD+ + EA ++A R +
Sbjct: 353 FPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRM 412
Query: 441 NITLKEIDDSIDRIV-AGMEGT 461
+T ++ S + ++ EGT
Sbjct: 413 KVTNEDFKKSKENVLYKKQEGT 434
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 102/262 (38%), Positives = 152/262 (58%)
Query: 202 KFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGK 260
K E P T+ D+ G+D Q+ +E V+ L PE + +G K PKGV+L GPPGTGK
Sbjct: 102 KVEKAPQE--TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGK 159
Query: 261 TLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXX 320
TLLAKA+A + F + GSE I+ ++G G VR+LF A+ ++P +VFIDEIDA+
Sbjct: 160 TLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGT 219
Query: 321 XXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVS 380
E ++T+ +LL ++DGF V VI ATNR E LD AL RPGR DR++
Sbjct: 220 KRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIE 279
Query: 381 VGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKA 440
LPD + +++I ++H++ L DV+L + SGAD+ + EA ++A R +
Sbjct: 280 FPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRM 339
Query: 441 NITLKEIDDSIDRIV-AGMEGT 461
+T ++ S + ++ EGT
Sbjct: 340 KVTNEDFKKSKENVLYKKQEGT 361
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 102/262 (38%), Positives = 152/262 (58%)
Query: 202 KFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGK 260
K E P T+ D+ G+D Q+ +E V+ L PE + +G K PKGV+L GPPGTGK
Sbjct: 175 KVEKAPQE--TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGK 232
Query: 261 TLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXX 320
TLLAKA+A + F + GSE I+ ++G G VR+LF A+ ++P +VFIDEIDA+
Sbjct: 233 TLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGT 292
Query: 321 XXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVS 380
E ++T+ +LL ++DGF V VI ATNR E LD AL RPGR DR++
Sbjct: 293 KRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIE 352
Query: 381 VGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKA 440
LPD + +++I ++H++ L DV+L + SGAD+ + EA ++A R +
Sbjct: 353 FPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRM 412
Query: 441 NITLKEIDDSIDRIV-AGMEGT 461
+T ++ S + ++ EGT
Sbjct: 413 KVTNEDFKKSKENVLYKKQEGT 434
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 102/262 (38%), Positives = 152/262 (58%)
Query: 202 KFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGK 260
K E P T+ D+ G+D Q+ +E V+ L PE + +G K PKGV+L GPPGTGK
Sbjct: 175 KVEKAPQE--TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGK 232
Query: 261 TLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXX 320
TLLAKA+A + F + GSE I+ ++G G VR+LF A+ ++P +VFIDEIDA+
Sbjct: 233 TLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGT 292
Query: 321 XXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVS 380
E ++T+ +LL ++DGF V VI ATNR E LD AL RPGR DR++
Sbjct: 293 KRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIE 352
Query: 381 VGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKA 440
LPD + +++I ++H++ L DV+L + SGAD+ + EA ++A R +
Sbjct: 353 FPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRM 412
Query: 441 NITLKEIDDSIDRIV-AGMEGT 461
+T ++ S + ++ EGT
Sbjct: 413 KVTNEDFKKSKENVLYKKQEGT 434
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 102/262 (38%), Positives = 152/262 (58%)
Query: 202 KFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGK 260
K E P T+ D+ G+D Q+ +E V+ L PE + +G K PKGV+L GPPGTGK
Sbjct: 175 KVEKAPQE--TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGK 232
Query: 261 TLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXX 320
TLLAKA+A + F + GSE I+ ++G G VR+LF A+ ++P +VFIDEIDA+
Sbjct: 233 TLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGT 292
Query: 321 XXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVS 380
E ++T+ +LL ++DGF V VI ATNR E LD AL RPGR DR++
Sbjct: 293 KRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIE 352
Query: 381 VGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKA 440
LPD + +++I ++H++ L DV+L + SGAD+ + EA ++A R +
Sbjct: 353 FPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRM 412
Query: 441 NITLKEIDDSIDRIV-AGMEGT 461
+T ++ S + ++ EGT
Sbjct: 413 KVTNEDFKKSKENVLYKKQEGT 434
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 102/262 (38%), Positives = 152/262 (58%)
Query: 202 KFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGK 260
K E P T+ D+ G+D Q+ +E V+ L PE + +G K PKGV+L GPPGTGK
Sbjct: 175 KVEKAPQE--TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGK 232
Query: 261 TLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXX 320
TLLAKA+A + F + GSE I+ ++G G VR+LF A+ ++P +VFIDEIDA+
Sbjct: 233 TLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGT 292
Query: 321 XXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVS 380
E ++T+ +LL ++DGF V VI ATNR E LD AL RPGR DR++
Sbjct: 293 KRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIE 352
Query: 381 VGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKA 440
LPD + +++I ++H++ L DV+L + SGAD+ + EA ++A R +
Sbjct: 353 FPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRM 412
Query: 441 NITLKEIDDSIDRIV-AGMEGT 461
+T ++ S + ++ EGT
Sbjct: 413 KVTNEDFKKSKENVLYKKQEGT 434
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 101/267 (37%), Positives = 155/267 (58%)
Query: 198 RSKAKFEMEPNTGVTFDDVAGVDEAKQDFQE-IVQFLQTPEKFAAVGAKIPKGVLLVGPP 256
R KA E++ + D+ G+D+ ++ E IV ++ E+F +G K PKG L+ GPP
Sbjct: 196 RVKA-MEVDEKPTEKYTDIGGLDKQIEEIVEAIVWPMKEAERFKKLGIKAPKGALMYGPP 254
Query: 257 GTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEID 316
GTGKTLLA+A A E F L+G + ++MF+G GA VRD F AK +P ++FIDE+D
Sbjct: 255 GTGKTLLARACAAETNATFLKLAGPQLVQMFIGDGAKLVRDCFALAKEKAPSIIFIDELD 314
Query: 317 AVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFD 376
AV + E ++T+ +LL ++DGF + + V+AATNR ++LD AL R GR D
Sbjct: 315 AVGTKRFDSEKSGDREVQRTMLELLNQLDGFASDDRIKVLAATNRVDVLDPALLRSGRLD 374
Query: 377 RQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
R++ LP+ R IL++HS ++ V+ + +A T F GA L + EA ++A R
Sbjct: 375 RKIEFPLPNEEARANILQIHSRKMTVEDSVNWAELARSTDEFGGAQLKAVCVEAGMIALR 434
Query: 437 RGKANITLKEIDDSIDRIVAGMEGTKM 463
+G + I + D+I + A + T M
Sbjct: 435 KGHSKIGHENYVDAIAEVQAKKKDTNM 461
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 95/258 (36%), Positives = 150/258 (58%)
Query: 206 EPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLA 264
EP ++F+ + G+ E ++ +E+++ L+ PE F VG K PKGVLL GPPGTGKTLLA
Sbjct: 165 EPGE-ISFNGIGGLTEQIRELREVIELPLKNPELFTRVGIKPPKGVLLYGPPGTGKTLLA 223
Query: 265 KAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXX 324
KA+A G F S ++ ++G A +R++F AK + PC++F+DE+DA+
Sbjct: 224 KAVAATIGANFIFSPASAIVDKYIGESARLIREMFAYAKEHEPCIIFMDEVDAIGGRRFS 283
Query: 325 XXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLP 384
+ E ++TL +LL +MDGF +I ATNRP+ LD AL R GR DR++ +GLP
Sbjct: 284 EGTSADREIQRTLMELLNQMDGFDTLGQTKIIMATNRPDTLDPALLRAGRLDRKIEIGLP 343
Query: 385 DIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITL 444
+ GR +I K+H++ + + GF+GAD+ N++ EA A R + I
Sbjct: 344 NEAGRLEIFKIHTSKVAKQGEFDFEAAVKMSDGFNGADIRNVVTEAGFFAIRDDRDYILQ 403
Query: 445 KEIDDSIDRI--VAGMEG 460
++ ++ ++ V +EG
Sbjct: 404 NDLMKAVRKVADVKKLEG 421
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 94/256 (36%), Positives = 159/256 (62%)
Query: 202 KFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGK 260
K E P++ T+D + G+D+ ++ +E+++ ++ PE F ++G PKGVLL GPPGTGK
Sbjct: 151 KVEKVPDS--TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGK 208
Query: 261 TLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXX 320
TLLA+A+A F +SGSE ++ ++G G+ VR+LF A+ ++P ++F+DEID++
Sbjct: 209 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 268
Query: 321 XXXXXXXXXND-EREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQV 379
D E ++T+ +LL ++DGF ++ + V+ ATNR +ILD AL RPGR DR++
Sbjct: 269 ARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKI 328
Query: 380 SVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGK 439
P+ R ILK+HS L + + L IA + G SGA+L + EA + A R +
Sbjct: 329 EFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERR 388
Query: 440 ANITLKEIDDSIDRIV 455
++T ++ + ++ +++
Sbjct: 389 VHVTQEDFEMAVAKVM 404
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 94/256 (36%), Positives = 159/256 (62%)
Query: 202 KFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGK 260
K E P++ T+D + G+D+ ++ +E+++ ++ PE F ++G PKGVLL GPPGTGK
Sbjct: 151 KVEKVPDS--TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGK 208
Query: 261 TLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXX 320
TLLA+A+A F +SGSE ++ ++G G+ VR+LF A+ ++P ++F+DEID++
Sbjct: 209 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 268
Query: 321 XXXXXXXXXND-EREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQV 379
D E ++T+ +LL ++DGF ++ + V+ ATNR +ILD AL RPGR DR++
Sbjct: 269 ARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKI 328
Query: 380 SVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGK 439
P+ R ILK+HS L + + L IA + G SGA+L + EA + A R +
Sbjct: 329 EFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERR 388
Query: 440 ANITLKEIDDSIDRIV 455
++T ++ + ++ +++
Sbjct: 389 VHVTQEDFEMAVAKVM 404
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 102/262 (38%), Positives = 150/262 (57%)
Query: 202 KFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGK 260
K E P T+ D+ G+D Q+ +E V+ L PE + +G K PKGV+L GPPGTGK
Sbjct: 175 KLEKAPQE--TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGK 232
Query: 261 TLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXX 320
TLLAKA+A + F + GSE I+ ++G G VR+LF A+ + P +VFIDEIDA+
Sbjct: 233 TLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGT 292
Query: 321 XXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVS 380
E ++T+ +LL ++DGF V VI ATNR E LD AL RPGR DR++
Sbjct: 293 KRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIE 352
Query: 381 VGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKA 440
LPD + +++I ++H++ L DV+L + SGAD+ + EA ++A R +
Sbjct: 353 FPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRM 412
Query: 441 NITLKEIDDSIDRIV-AGMEGT 461
+T ++ S + + EGT
Sbjct: 413 KVTNEDFKKSKENFLYKKTEGT 434
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 99/265 (37%), Positives = 153/265 (57%)
Query: 198 RSKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQFLQT-PEKFAAVGAKIPKGVLLVGPP 256
R KA E++ + D+ G+D+ Q+ E V T E+F ++G K PKGVL+ GPP
Sbjct: 153 RVKA-MEIDEKPTEEYSDIGGLDKQIQELVEAVVLPMTHKERFESIGIKPPKGVLMYGPP 211
Query: 257 GTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEID 316
GTGKTLLA+A A + + L+G + ++MF+G GA VRD F AK P ++FIDE+D
Sbjct: 212 GTGKTLLARACAAQTNSTYLKLAGPQLVQMFIGDGAKLVRDAFALAKEKGPTIIFIDELD 271
Query: 317 AVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFD 376
A+ + E ++T+ +LL ++DGF+ ++ + VIAATNR +ILD AL R GR D
Sbjct: 272 AIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDANIKVIAATNRIDILDPALLRSGRLD 331
Query: 377 RQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
R++ LP+ R IL++HS + DV+ +A + F+GA L + EA ++A R
Sbjct: 332 RKIEFPLPNEEARAHILQIHSRKMNVSADVNFDELARSSEDFNGAQLKAVCVEAGMIALR 391
Query: 437 RGKANITLKEIDDSIDRIVAGMEGT 461
RG + + + ++A + T
Sbjct: 392 RGGTELIHNDFVEGCVEVMAKKKKT 416
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 97/260 (37%), Positives = 154/260 (59%)
Query: 198 RSKAKFEMEPNTGVTFDDVAGVDEAKQDFQE-IVQFLQTPEKFAAVGAKIPKGVLLVGPP 256
R KA E++ T+ DV G+D+ ++ E IV ++ +KF +G + PKG L+ GPP
Sbjct: 166 RVKA-MEVDEKPTETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPP 224
Query: 257 GTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEID 316
GTGKTLLA+A A + F L+ + ++M++G GA VRD F AK +P ++FIDE+D
Sbjct: 225 GTGKTLLARACAAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELD 284
Query: 317 AVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFD 376
A+ + E ++T+ +LL ++DGF+ + V V+AATNR ++LD AL R GR D
Sbjct: 285 AIGTKRFDSEKSGDREVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLD 344
Query: 377 RQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
R++ LP R QIL++HS D D++ +A T F+GA L + EA ++A R
Sbjct: 345 RKIEFPLPSEDSRAQILQIHSRKMTTDDDINWQELARSTDEFNGAQLKAVTVEAGMIALR 404
Query: 437 RGKANITLKEIDDSIDRIVA 456
G++++ ++ + I + A
Sbjct: 405 NGQSSVKHEDFVEGISEVQA 424
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 94/258 (36%), Positives = 151/258 (58%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
+ F + G+++ ++ +E+++ L+ PE F VG K PKGVLL GPPGTGKTLLA+A+A
Sbjct: 134 INFAGIGGLNDQIRELREVIELPLKNPELFQRVGIKPPKGVLLYGPPGTGKTLLARAVAS 193
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
F + S ++ ++G A +R++F AK + PC++F+DEIDA+
Sbjct: 194 SMETNFLKVVSSAIVDKYIGESARLIREMFGYAKEHEPCIIFMDEIDAIGGRRFSEGTSA 253
Query: 330 NDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGR 389
+ E ++TL +LL ++DGF +I ATNRP+ LD AL R GR DR++ + LP+ GR
Sbjct: 254 DREIQRTLMELLNQLDGFDYLGKTKIIMATNRPDTLDPALLRAGRLDRKIEIPLPNEVGR 313
Query: 390 EQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDD 449
+ILK+HS+ +++ D+ + + G +GADL N++ EA + A + + I D
Sbjct: 314 LEILKIHSSTVQMEGDIDFESVVKMSDGLNGADLRNVVTEAGLFAIKDYRDAIN----QD 369
Query: 450 SIDRIVAGMEGTKMTDGK 467
+R V + K +GK
Sbjct: 370 DFNRAVRKVAEAKKLEGK 387
>ASPGD|ASPL0000036562 [details] [associations]
symbol:AN2904 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 TIGRFAMs:TIGR01242 EnsemblFungi:CADANIAT00010185
OMA:EDAYSAQ Uniprot:C8VJ79
Length = 422
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 100/256 (39%), Positives = 147/256 (57%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQFLQTP-EKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
VT+ DV G+D KQ+ +E V+ T + + +G P+GVLL GPPGTGKT+L KA+A
Sbjct: 163 VTYADVGGLDMQKQEIREAVELPLTHFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 222
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
F ++GSEF++ ++G G VRD+F A+ NSP ++FIDEIDA+
Sbjct: 223 STTASFIRVNGSEFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEIDAIATKRFDAQTGA 282
Query: 330 NDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSV-GLPDIRG 388
+ E ++ L +LL +MDGF S V VI ATNR + LD AL RPGR DR++ L D R
Sbjct: 283 DREVQRILLELLNQMDGFEQTSNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRDRRE 342
Query: 389 REQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEID 448
R I ++ L +V L + R SGA +A +M EA + A R+ + NI +++
Sbjct: 343 RRLIFSTIASKMSLSPEVDLDSLIVRNEPLSGAVIAAIMQEAGLRAVRKNRYNIIQSDLE 402
Query: 449 DSID-RIVAGMEGTKM 463
D+ ++ G E ++
Sbjct: 403 DAYSAQVKTGQEADRL 418
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 101/260 (38%), Positives = 153/260 (58%)
Query: 198 RSKAKFEMEPNTGVTFDDVAGVDEAKQDFQE-IVQFLQTPEKFAAVGAKIPKGVLLVGPP 256
R KA E++ + D+ G+D+ Q+ E IV + EKF +G + PKGVL+ GPP
Sbjct: 117 RVKA-MEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 175
Query: 257 GTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEID 316
GTGKTLLA+A A + F L+G + ++MF+G GA VRD F AK +P ++FIDE+D
Sbjct: 176 GTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELD 235
Query: 317 AVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFD 376
A+ + E ++T+ +LL ++DGF N+ V VIAATNR +ILD AL R GR D
Sbjct: 236 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLD 295
Query: 377 RQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
R++ +P+ R +I+++HS + DV+ +A T F+GA + EA ++A R
Sbjct: 296 RKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 355
Query: 437 RGKANITLKEIDDSIDRIVA 456
RG +T ++ + I + A
Sbjct: 356 RGATELTHEDYMEGILEVQA 375
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 101/260 (38%), Positives = 153/260 (58%)
Query: 198 RSKAKFEMEPNTGVTFDDVAGVDEAKQDFQE-IVQFLQTPEKFAAVGAKIPKGVLLVGPP 256
R KA E++ + D+ G+D+ Q+ E IV + EKF +G + PKGVL+ GPP
Sbjct: 121 RVKA-MEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 179
Query: 257 GTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEID 316
GTGKTLLA+A A + F L+G + ++MF+G GA VRD F AK +P ++FIDE+D
Sbjct: 180 GTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELD 239
Query: 317 AVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFD 376
A+ + E ++T+ +LL ++DGF N+ V VIAATNR +ILD AL R GR D
Sbjct: 240 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLD 299
Query: 377 RQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
R++ +P+ R +I+++HS + DV+ +A T F+GA + EA ++A R
Sbjct: 300 RKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 359
Query: 437 RGKANITLKEIDDSIDRIVA 456
RG +T ++ + I + A
Sbjct: 360 RGATELTHEDYMEGILEVQA 379
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 101/260 (38%), Positives = 153/260 (58%)
Query: 198 RSKAKFEMEPNTGVTFDDVAGVDEAKQDFQE-IVQFLQTPEKFAAVGAKIPKGVLLVGPP 256
R KA E++ + D+ G+D+ Q+ E IV + EKF +G + PKGVL+ GPP
Sbjct: 171 RVKA-MEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 229
Query: 257 GTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEID 316
GTGKTLLA+A A + F L+G + ++MF+G GA VRD F AK +P ++FIDE+D
Sbjct: 230 GTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELD 289
Query: 317 AVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFD 376
A+ + E ++T+ +LL ++DGF N+ V VIAATNR +ILD AL R GR D
Sbjct: 290 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLD 349
Query: 377 RQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
R++ +P+ R +I+++HS + DV+ +A T F+GA + EA ++A R
Sbjct: 350 RKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 409
Query: 437 RGKANITLKEIDDSIDRIVA 456
RG +T ++ + I + A
Sbjct: 410 RGATELTHEDYMEGILEVQA 429
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 101/260 (38%), Positives = 153/260 (58%)
Query: 198 RSKAKFEMEPNTGVTFDDVAGVDEAKQDFQE-IVQFLQTPEKFAAVGAKIPKGVLLVGPP 256
R KA E++ + D+ G+D+ Q+ E IV + EKF +G + PKGVL+ GPP
Sbjct: 129 RVKA-MEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 187
Query: 257 GTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEID 316
GTGKTLLA+A A + F L+G + ++MF+G GA VRD F AK +P ++FIDE+D
Sbjct: 188 GTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELD 247
Query: 317 AVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFD 376
A+ + E ++T+ +LL ++DGF N+ V VIAATNR +ILD AL R GR D
Sbjct: 248 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLD 307
Query: 377 RQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
R++ +P+ R +I+++HS + DV+ +A T F+GA + EA ++A R
Sbjct: 308 RKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 367
Query: 437 RGKANITLKEIDDSIDRIVA 456
RG +T ++ + I + A
Sbjct: 368 RGATELTHEDYMEGILEVQA 387
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 101/260 (38%), Positives = 153/260 (58%)
Query: 198 RSKAKFEMEPNTGVTFDDVAGVDEAKQDFQE-IVQFLQTPEKFAAVGAKIPKGVLLVGPP 256
R KA E++ + D+ G+D+ Q+ E IV + EKF +G + PKGVL+ GPP
Sbjct: 171 RVKA-MEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 229
Query: 257 GTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEID 316
GTGKTLLA+A A + F L+G + ++MF+G GA VRD F AK +P ++FIDE+D
Sbjct: 230 GTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELD 289
Query: 317 AVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFD 376
A+ + E ++T+ +LL ++DGF N+ V VIAATNR +ILD AL R GR D
Sbjct: 290 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLD 349
Query: 377 RQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
R++ +P+ R +I+++HS + DV+ +A T F+GA + EA ++A R
Sbjct: 350 RKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 409
Query: 437 RGKANITLKEIDDSIDRIVA 456
RG +T ++ + I + A
Sbjct: 410 RGATELTHEDYMEGILEVQA 429
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 101/260 (38%), Positives = 153/260 (58%)
Query: 198 RSKAKFEMEPNTGVTFDDVAGVDEAKQDFQE-IVQFLQTPEKFAAVGAKIPKGVLLVGPP 256
R KA E++ + D+ G+D+ Q+ E IV + EKF +G + PKGVL+ GPP
Sbjct: 178 RVKA-MEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 236
Query: 257 GTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEID 316
GTGKTLLA+A A + F L+G + ++MF+G GA VRD F AK +P ++FIDE+D
Sbjct: 237 GTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELD 296
Query: 317 AVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFD 376
A+ + E ++T+ +LL ++DGF N+ V VIAATNR +ILD AL R GR D
Sbjct: 297 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLD 356
Query: 377 RQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
R++ +P+ R +I+++HS + DV+ +A T F+GA + EA ++A R
Sbjct: 357 RKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 416
Query: 437 RGKANITLKEIDDSIDRIVA 456
RG +T ++ + I + A
Sbjct: 417 RGATELTHEDYMEGILEVQA 436
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 101/260 (38%), Positives = 153/260 (58%)
Query: 198 RSKAKFEMEPNTGVTFDDVAGVDEAKQDFQE-IVQFLQTPEKFAAVGAKIPKGVLLVGPP 256
R KA E++ + D+ G+D+ Q+ E IV + EKF +G + PKGVL+ GPP
Sbjct: 174 RVKA-MEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 232
Query: 257 GTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEID 316
GTGKTLLA+A A + F L+G + ++MF+G GA VRD F AK +P ++FIDE+D
Sbjct: 233 GTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELD 292
Query: 317 AVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFD 376
A+ + E ++T+ +LL ++DGF N+ V VIAATNR +ILD AL R GR D
Sbjct: 293 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLD 352
Query: 377 RQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
R++ +P+ R +I+++HS + DV+ +A T F+GA + EA ++A R
Sbjct: 353 RKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 412
Query: 437 RGKANITLKEIDDSIDRIVA 456
RG +T ++ + I + A
Sbjct: 413 RGATELTHEDYMEGILEVQA 432
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 101/260 (38%), Positives = 153/260 (58%)
Query: 198 RSKAKFEMEPNTGVTFDDVAGVDEAKQDFQE-IVQFLQTPEKFAAVGAKIPKGVLLVGPP 256
R KA E++ + D+ G+D+ Q+ E IV + EKF +G + PKGVL+ GPP
Sbjct: 171 RVKA-MEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 229
Query: 257 GTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEID 316
GTGKTLLA+A A + F L+G + ++MF+G GA VRD F AK +P ++FIDE+D
Sbjct: 230 GTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELD 289
Query: 317 AVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFD 376
A+ + E ++T+ +LL ++DGF N+ V VIAATNR +ILD AL R GR D
Sbjct: 290 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLD 349
Query: 377 RQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
R++ +P+ R +I+++HS + DV+ +A T F+GA + EA ++A R
Sbjct: 350 RKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 409
Query: 437 RGKANITLKEIDDSIDRIVA 456
RG +T ++ + I + A
Sbjct: 410 RGATELTHEDYMEGILEVQA 429
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 101/260 (38%), Positives = 153/260 (58%)
Query: 198 RSKAKFEMEPNTGVTFDDVAGVDEAKQDFQE-IVQFLQTPEKFAAVGAKIPKGVLLVGPP 256
R KA E++ + D+ G+D+ Q+ E IV + EKF +G + PKGVL+ GPP
Sbjct: 174 RVKA-MEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 232
Query: 257 GTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEID 316
GTGKTLLA+A A + F L+G + ++MF+G GA VRD F AK +P ++FIDE+D
Sbjct: 233 GTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELD 292
Query: 317 AVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFD 376
A+ + E ++T+ +LL ++DGF N+ V VIAATNR +ILD AL R GR D
Sbjct: 293 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLD 352
Query: 377 RQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
R++ +P+ R +I+++HS + DV+ +A T F+GA + EA ++A R
Sbjct: 353 RKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 412
Query: 437 RGKANITLKEIDDSIDRIVA 456
RG +T ++ + I + A
Sbjct: 413 RGATELTHEDYMEGILEVQA 432
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 94/259 (36%), Positives = 158/259 (61%)
Query: 199 SKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPG 257
S K E P++ T+D V G+D+ ++ +E+++ ++ PE F ++G PKGVLL GPPG
Sbjct: 132 SLMKVEKIPDS--TYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPG 189
Query: 258 TGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDA 317
TGKTLLA+A+A F +SGSE ++ ++G G+ VR+LF A+ ++P ++F+DEID+
Sbjct: 190 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDS 249
Query: 318 VXXXXXXXXXXXND-EREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFD 376
+ D E ++T+ +LL ++DGF + V+ TNR +ILD AL RPGR D
Sbjct: 250 IGSSRGESGSGGGDSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRID 309
Query: 377 RQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
R++ P GR ILK+HS L + ++L I+ + G SGA+L + EA + A R
Sbjct: 310 RKIEFPNPGDAGRLDILKIHSRKMNLTRGINLKKISDKMNGASGAELKAVCTEAGMYALR 369
Query: 437 RGKANITLKEIDDSIDRIV 455
+ +++ ++ + ++ +++
Sbjct: 370 ERRVHVSQEDFEMAVSKVM 388
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 101/260 (38%), Positives = 153/260 (58%)
Query: 198 RSKAKFEMEPNTGVTFDDVAGVDEAKQDFQE-IVQFLQTPEKFAAVGAKIPKGVLLVGPP 256
R KA E++ + D+ G+D+ Q+ E IV + EKF +G + PKGVL+ GPP
Sbjct: 136 RVKA-MEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 194
Query: 257 GTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEID 316
GTGKTLLA+A A + F L+G + ++MF+G GA VRD F+ AK +P ++FIDE+D
Sbjct: 195 GTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELD 254
Query: 317 AVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFD 376
A+ + E ++T+ +LL ++DGF + V VIAATNR +ILD AL R GR D
Sbjct: 255 AIGNKRFDSEKAGDREVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLD 314
Query: 377 RQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
R++ +P+ R +I+++HS + DV+ +A T F+GA + EA I+A R
Sbjct: 315 RKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGIIALR 374
Query: 437 RGKANITLKEIDDSIDRIVA 456
RG +T ++ + I + A
Sbjct: 375 RGATELTHEDYMEGILEVQA 394
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 89/246 (36%), Positives = 153/246 (62%)
Query: 212 TFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGE 270
T++ V G+++ ++ +E+++ ++ PE F ++G PKG+LL GPPGTGKTLLA+A+A
Sbjct: 143 TYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHH 202
Query: 271 AGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXN 330
F +SGSE ++ ++G G+ VR+LF A+ ++P ++F+DEID++
Sbjct: 203 TDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGSG 262
Query: 331 D-EREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGR 389
D E ++T+ +LL ++DGF + VI ATNR +ILD AL RPGR DR++ P R
Sbjct: 263 DSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEAR 322
Query: 390 EQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDD 449
+IL++HS + L + + L IA + G SGA+L + EA + A R + ++T ++ +
Sbjct: 323 AEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRERRVHVTQEDFEL 382
Query: 450 SIDRIV 455
++ +++
Sbjct: 383 AVAKVL 388
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 101/262 (38%), Positives = 151/262 (57%)
Query: 202 KFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGK 260
K E P T+ D+ G+D Q+ +E V+ L PE + +G K PKGV+L G PGTGK
Sbjct: 175 KVEKAPQE--TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGK 232
Query: 261 TLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXX 320
TLLAKA+A + F + GSE I+ ++G G VR+LF A+ ++P +VFIDEIDA+
Sbjct: 233 TLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGT 292
Query: 321 XXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVS 380
E ++T+ +LL ++DGF V VI ATNR E LD AL RPGR DR++
Sbjct: 293 KRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIE 352
Query: 381 VGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKA 440
LPD + + +I ++H++ + +DVSL + SGAD+ + EA ++A R +
Sbjct: 353 FPLPDEKTKRRIFQIHTSRMTVAEDVSLDDLILAKDDLSGADIKAICTEAGLMALRERRM 412
Query: 441 NITLKEIDDSIDRIV-AGMEGT 461
+T ++ S + ++ EGT
Sbjct: 413 KVTNEDFKKSKENVLYKKQEGT 434
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 443 (161.0 bits), Expect = 6.5e-44, Sum P(2) = 6.5e-44
Identities = 99/280 (35%), Positives = 154/280 (55%)
Query: 199 SKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPG 257
S K + P ++ D+ G++ Q+ +E V+ L PE + +G K PKGV+L G PG
Sbjct: 173 SVMKLDKSPTE--SYADIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPG 230
Query: 258 TGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDA 317
TGKTLLAKA+A + F + GSE I+ ++G G R +F A ++P +VFIDEIDA
Sbjct: 231 TGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFQIAADHAPSIVFIDEIDA 290
Query: 318 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDR 377
+ E ++T+ +LL ++DGF + VI ATN+ E LD AL RPGR DR
Sbjct: 291 IGTKRYESTSGGEREIQRTMLELLNQLDGFDDRGDIKVIMATNKIESLDPALIRPGRIDR 350
Query: 378 QVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRR 437
++ PD +++IL +H++ L DV+L I T SGAD+ + EA +LA R
Sbjct: 351 KILFENPDANTKKKILTIHTSKMSLADDVNLDEIVTGKDDLSGADIKAICTEAGLLALRE 410
Query: 438 GKANITLKEIDDSIDRIVAG-----MEGTKMTDGKNKILV 472
+ + ++ + +R++ +EG + +N I+V
Sbjct: 411 RRMQVKAEDFKSAKERVLKNKVEENLEGLNLQVHRNTIIV 450
Score = 37 (18.1 bits), Expect = 6.5e-44, Sum P(2) = 6.5e-44
Identities = 6/18 (33%), Positives = 11/18 (61%)
Query: 32 RESPFHKTPTDVKLSKRK 49
+E P ++ P + K K+K
Sbjct: 23 KEKPKYEPPVESKFGKKK 40
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 88/257 (34%), Positives = 159/257 (61%)
Query: 212 TFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGE 270
T+D V G+ + ++ +E+++ ++ PE F ++G PKGV+L GPPGTGKTLLA+A+A
Sbjct: 146 TYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHH 205
Query: 271 AGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXN 330
F +SG+E ++ ++G G+ VR+LF A+ ++P ++F+DEID++ +
Sbjct: 206 TDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGGGD 265
Query: 331 DEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGRE 390
E ++T+ +LL ++DGF + + +I ATNR +ILD AL RPGR DR++ P + R
Sbjct: 266 SEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARA 325
Query: 391 QILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDS 450
+IL++HS L + ++L +A + G SGAD+ + EA + A R + ++T ++ + +
Sbjct: 326 EILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFELA 385
Query: 451 IDRIVAGMEGTKMTDGK 467
+ +++ + T ++ K
Sbjct: 386 VGKVMNKNQETAISVAK 402
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 95/243 (39%), Positives = 143/243 (58%)
Query: 207 PNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAK 265
PN V + D+ G+D KQ+ +E V+ L PE + +G + P G+L+ GPPGTGKT+L K
Sbjct: 133 PN--VKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVK 190
Query: 266 AIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXX 325
A+A E V F + GSEF++ ++G G VRD+F A+ NSP ++FIDE+DA+
Sbjct: 191 AVANETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATKRFDA 250
Query: 326 XXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPD 385
+ E ++ L +LL +MDGF ++ V VI ATNR + LD AL RPGR DR++ LPD
Sbjct: 251 QTGADREVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPD 310
Query: 386 IRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLK 445
+ + I + + + DV++ RT S AD+A + EA + A R+ + IT
Sbjct: 311 RKQKRLIFQTIISKMNVSSDVNIESFVVRTDKISAADIAAIAQEAGMQAIRKNRYIITAN 370
Query: 446 EID 448
+ +
Sbjct: 371 DFE 373
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 95/243 (39%), Positives = 143/243 (58%)
Query: 207 PNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAK 265
PN V + D+ G+D KQ+ +E V+ L PE + +G + P G+L+ GPPGTGKT+L K
Sbjct: 133 PN--VKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVK 190
Query: 266 AIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXX 325
A+A E V F + GSEF++ ++G G VRD+F A+ NSP ++FIDE+DA+
Sbjct: 191 AVANETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATKRFDA 250
Query: 326 XXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPD 385
+ E ++ L +LL +MDGF ++ V VI ATNR + LD AL RPGR DR++ LPD
Sbjct: 251 QTGADREVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPD 310
Query: 386 IRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLK 445
+ + I + + + DV++ RT S AD+A + EA + A R+ + IT
Sbjct: 311 RKQKRLIFQTIISKMNVSSDVNIESFVVRTDKISAADIAAIAQEAGMQAIRKNRYIITAN 370
Query: 446 EID 448
+ +
Sbjct: 371 DFE 373
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 98/245 (40%), Positives = 143/245 (58%)
Query: 212 TFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGE 270
++ D+ G++ Q+ +E V+ L PE + +G K PKGV+L G PGTGKTLLAKA+A
Sbjct: 186 SYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANS 245
Query: 271 AGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXN 330
F + GSE I+ ++G G VR+LF A SP +VFIDEIDAV
Sbjct: 246 TSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGE 305
Query: 331 DEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGRE 390
E ++T+ +LL ++DGF V VI ATNR E LD AL RPGR DR++ LPDI+ R
Sbjct: 306 REIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRR 365
Query: 391 QILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDS 450
+I ++H++ L +DV+L FSGAD+ + EA +LA R + +T + +
Sbjct: 366 RIFQIHTSKMTLSEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHPDFKKA 425
Query: 451 IDRIV 455
++++
Sbjct: 426 KEKVM 430
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 99/267 (37%), Positives = 152/267 (56%)
Query: 202 KFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGK 260
K E N V ++ + G+ E + +E+V+ + P + VG K PKGVLL GPPGTGK
Sbjct: 126 KSENSTNK-VNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGK 184
Query: 261 TLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXX 320
TLLA+A+A F + S ++ ++G A +R++FN AK + PC++F+DEIDA+
Sbjct: 185 TLLARAMASNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAIGG 244
Query: 321 XXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVS 380
+ E ++TL +LL +DGF V +I ATNRP++LD AL RPGR DR++
Sbjct: 245 RRFSQGTSADREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIE 304
Query: 381 VGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKA 440
+ LP+ R +ILK+H+N D+ + GF+GADL N+ EA + A R +
Sbjct: 305 IPLPNETARIEILKIHANKMTKLGDIDYESVCRLCDGFNGADLRNVCTEAGMFAIRAMRD 364
Query: 441 NITLKEIDDSIDRIVAGMEGTKMTDGK 467
+ ++ + +I EG K+ +GK
Sbjct: 365 YVIEEDFYKAARKI---SEGKKL-EGK 387
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 99/267 (37%), Positives = 152/267 (56%)
Query: 202 KFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGK 260
K E N V ++ + G+ E + +E+V+ + P + VG K PKGVLL GPPGTGK
Sbjct: 126 KSENSTNK-VNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGK 184
Query: 261 TLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXX 320
TLLA+A+A F + S ++ ++G A +R++FN AK + PC++F+DEIDA+
Sbjct: 185 TLLARAMASNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAIGG 244
Query: 321 XXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVS 380
+ E ++TL +LL +DGF V +I ATNRP++LD AL RPGR DR++
Sbjct: 245 RRFSQGTSADREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIE 304
Query: 381 VGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKA 440
+ LP+ R +ILK+H+N D+ + GF+GADL N+ EA + A R +
Sbjct: 305 IPLPNETARIEILKIHANKMTKLGDIDYESVCRLCDGFNGADLRNVCTEAGMFAIRAMRD 364
Query: 441 NITLKEIDDSIDRIVAGMEGTKMTDGK 467
+ ++ + +I EG K+ +GK
Sbjct: 365 YVIEEDFYKAARKI---SEGKKL-EGK 387
>POMBASE|SPAC3A11.12c [details] [associations]
symbol:rpt5 "19S proteasome regulatory subunit Rpt5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC3A11.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 GO:GO:0008540
OMA:GALMYGP EMBL:AB012136 PIR:T11634 RefSeq:XP_001713083.1
ProteinModelPortal:O14126 STRING:O14126 PRIDE:O14126
EnsemblFungi:SPAC3A11.12c.1 GeneID:3361462 KEGG:spo:SPAC3A11.12c
OrthoDB:EOG40VZZ2 NextBio:20811506 Uniprot:O14126
Length = 438
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 98/255 (38%), Positives = 150/255 (58%)
Query: 198 RSKAKFEMEPNTGVTFDDVAGVDEAKQD-FQEIVQFLQTPEKFAAVGAKIPKGVLLVGPP 256
R KA E++ + D+ G+ + ++ F+ IV +Q +KF +G K PKG L+ GPP
Sbjct: 170 RVKA-MEVDEKPTERYSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPP 228
Query: 257 GTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEID 316
GTGKTLLA+A A ++ F L+ + ++MF+G GA VRD F AK SP ++FIDE+D
Sbjct: 229 GTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELD 288
Query: 317 AVXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFD 376
A+ + E ++T+ +LL ++DGF+ + V VIAATNR + LD AL R GR D
Sbjct: 289 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLD 348
Query: 377 RQVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
R++ LP+ R IL++HS +D D++ +A T ++GA L ++ EA ++A R
Sbjct: 349 RKLEFPLPNEEARVGILRIHSRKMAIDDDINWEELARSTDEYNGAMLKSVCVEAGMIALR 408
Query: 437 RGKANITLKEIDDSI 451
+G I + D I
Sbjct: 409 QGDTKINHEHFMDGI 423
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 94/253 (37%), Positives = 148/253 (58%)
Query: 204 EMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTL 262
+M+ + ++ D+ G++ Q+ +E V+ L PE + +G K PKGV+L G PGTGKTL
Sbjct: 172 KMDKSPTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTL 231
Query: 263 LAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXX 322
LAKA+A + F + GSE I+ ++G G R +F A N+P +VFIDEIDA+
Sbjct: 232 LAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKR 291
Query: 323 XXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVG 382
E ++T+ +LL ++DGF V VI ATN+ E LD AL RPGR DR++
Sbjct: 292 YDSNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFE 351
Query: 383 LPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANI 442
PD+ +++IL +H++ L +DV+L + T SGAD+ + EA +LA R + +
Sbjct: 352 NPDLSTKKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQV 411
Query: 443 TLKEIDDSIDRIV 455
T ++ + +R++
Sbjct: 412 TAEDFKQAKERVM 424
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 100/262 (38%), Positives = 150/262 (57%)
Query: 202 KFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGK 260
K E P T+ D+ G+D Q+ +E V+ L PE + +G K PKGV+L G PGTGK
Sbjct: 175 KVEKAPQE--TYADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGK 232
Query: 261 TLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXX 320
TLLAKA+A + F + GSE I+ ++G G VR+LF A+ ++P +VFIDEIDA+
Sbjct: 233 TLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGT 292
Query: 321 XXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVS 380
E ++T+ +LL ++DGF V VI ATNR E LD AL RPGR DR++
Sbjct: 293 KRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIE 352
Query: 381 VGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKA 440
LPD + + +I ++H++ + DV+L + SGAD+ + EA ++A R +
Sbjct: 353 FPLPDEKTKRRIFQIHTSRMTVADDVTLDDLILAKDDLSGADIKAICTEAGLMALRERRM 412
Query: 441 NITLKEIDDSIDRIV-AGMEGT 461
+T ++ S + ++ EGT
Sbjct: 413 KVTNEDFKKSKENVLYKKQEGT 434
>UNIPROTKB|F1MWE0 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:DAAA02041602 IPI:IPI00701790
UniGene:Bt.49089 Ensembl:ENSBTAT00000028983 NextBio:20868523
Uniprot:F1MWE0
Length = 456
Score = 438 (159.2 bits), Expect = 2.5e-43, Sum P(2) = 2.5e-43
Identities = 92/230 (40%), Positives = 138/230 (60%)
Query: 227 QEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEM 286
+ IV + EKF +G + PKGVL+ GPPGTGKTLLA+A A + F L+G + ++M
Sbjct: 217 EAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM 276
Query: 287 FVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDG 346
F+G GA VRD F AK +P ++FIDE+DA+ + E ++T+ +LL ++DG
Sbjct: 277 FIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDG 336
Query: 347 FTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGREQILKVHSNNKKLDKDV 406
F N+ V VIAATNR +ILD AL R GR DR++ +P+ R +I+++HS + DV
Sbjct: 337 FQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDV 396
Query: 407 SLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDSIDRIVA 456
+ +A T F+GA + EA ++A RRG +T ++ + I + A
Sbjct: 397 NYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQA 446
Score = 38 (18.4 bits), Expect = 2.5e-43, Sum P(2) = 2.5e-43
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 198 RSKAKFEMEPNTGVTFDDVAGVDEAKQDFQE 228
R KA E++ + D+ G+D+ Q+ +E
Sbjct: 172 RVKA-MEVDERPTEQYSDIGGLDKQIQEVRE 201
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 91/227 (40%), Positives = 138/227 (60%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
+++ V G+ + ++ +E ++ L PE F VG K PKGVLL GPPGTGKTLLA+AIA
Sbjct: 136 ISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 195
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
F + S I+ ++G A +R++FN A+ + PC++F+DEIDA+
Sbjct: 196 NIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSA 255
Query: 330 NDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGR 389
+ E ++TL +LL ++DGF V +I ATNRP++LD AL RPGR DR++ + LP+ + R
Sbjct: 256 DREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSR 315
Query: 390 EQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
+ILK+H++ ++ I GF+GADL N+ EA + A R
Sbjct: 316 MEILKIHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFAIR 362
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 98/245 (40%), Positives = 143/245 (58%)
Query: 212 TFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAGE 270
++ D+ G++ Q+ +E V+ L PE + +G K PKGV+L G PGTGKTLLAKA+A
Sbjct: 186 SYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANS 245
Query: 271 AGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXXN 330
F + GSE I+ ++G G VR+LF A SP +VFIDEIDAV
Sbjct: 246 TSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDANSGGE 305
Query: 331 DEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGRE 390
E ++T+ +LL ++DGF V VI ATNR E LD AL RPGR DR++ LPDI+ R
Sbjct: 306 REIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRR 365
Query: 391 QILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRRGKANITLKEIDDS 450
+I ++H++ L +DV+L FSGAD+ + EA +LA R + +T + +
Sbjct: 366 RIFQIHTSKMTLAEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHVDFKKA 425
Query: 451 IDRIV 455
++++
Sbjct: 426 KEKVM 430
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 91/227 (40%), Positives = 136/227 (59%)
Query: 211 VTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 269
+++ V G+ + ++ +E ++ L PE F VG K PKGVLL GPPGTGKTLLA+AIA
Sbjct: 136 ISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 195
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
F + S I+ ++G A +R++FN A+ + PC++F+DEIDA+
Sbjct: 196 NIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSA 255
Query: 330 NDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDIRGR 389
+ E ++TL +LL ++DGF V +I ATNRP++LD AL RPGR DR++ + LP+ + R
Sbjct: 256 DREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSR 315
Query: 390 EQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGR 436
ILK+H+ ++ I GF+GADL N+ EA + A R
Sbjct: 316 MDILKIHAAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGMFAIR 362
>UNIPROTKB|E7ERY0 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI00946072 ProteinModelPortal:E7ERY0 SMR:E7ERY0
Ensembl:ENST00000482491 ArrayExpress:E7ERY0 Bgee:E7ERY0
Uniprot:E7ERY0
Length = 580
Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
Identities = 103/244 (42%), Positives = 149/244 (61%)
Query: 203 FEMEPNTGVTFDDVAGVDEAKQDF-QEIVQFLQTPEKFAAVGAKIPKGVLLVGPPGTGKT 261
F PN VT+ D+ +++ +++ I+ ++ P++F A+G P GVLL GPPG GKT
Sbjct: 296 FVTVPN--VTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKT 353
Query: 262 LLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXX 321
LLAKA+A E+G+ F S+ G E + M+VG VR +F +AK ++PC++F DE+DA+
Sbjct: 354 LLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPR 413
Query: 322 XXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDRQVSV 381
+ + +NQLLTEMDG V ++AATNRP+I+D A+ RPGR D+ + V
Sbjct: 414 RSDRETGAS---VRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFV 470
Query: 382 GLPDIRGREQILK-VHSNNKK--LDKDVSLSVIA--TRTPGFSGADLANLMNEAAILAGR 436
GLP R ILK + N K LD DV+L IA R ++GADL+ L+ EA+I A R
Sbjct: 471 GLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALR 530
Query: 437 RGKA 440
+ A
Sbjct: 531 QEMA 534
Score = 289 (106.8 bits), Expect = 2.4e-22, P = 2.4e-22
Identities = 66/171 (38%), Positives = 94/171 (54%)
Query: 270 EAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDAVXXXXXXXXXXX 329
E +P ++ E + G ++R+LF +A +N+PC++FIDEIDA+
Sbjct: 45 ELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKREVAS--- 101
Query: 330 NDEREQTLNQLLTEMDGFTG---NSGVIVIAATNRPEILDSALHRPGRFDRQVSVGLPDI 386
D + + QLLT MD + V+VI ATNRP+ LD AL R GRFDR++ +G+PD
Sbjct: 102 KDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDE 161
Query: 387 RGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRR 437
RE+IL+ +L + +A TPGF GADL L EAA+ A R
Sbjct: 162 ASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNR 212
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
Identities = 92/258 (35%), Positives = 158/258 (61%)
Query: 199 SKAKFEMEPNTGVTFDDVAGVDEAKQDFQEIVQF-LQTPEKFAAVGAKIPKGVLLVGPPG 257
S K E P++ T++ V G+D+ ++ +E+++ ++ PE F ++G PKGVLL GPPG
Sbjct: 166 SLMKVEKVPDS--TYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPG 223
Query: 258 TGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKANSPCLVFIDEIDA 317
TGKTLLA+A+A F +SGSE ++ ++G G+ VR+LF A+ ++P ++F+DEID+
Sbjct: 224 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDS 283
Query: 318 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFTGNSGVIVIAATNRPEILDSALHRPGRFDR 377
+ + E ++T+ +LL ++DGF + VI TNR +ILD AL RPGR DR
Sbjct: 284 IGSQRIEGEHG-DSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDR 342
Query: 378 QVSVGLPDIRGREQILKVHSNNKKLDKDVSLSVIATRTPGFSGADLANLMNEAAILAGRR 437
++ P++ R +ILK+HS L + + + IAT SGA++ + EA + A R
Sbjct: 343 KIEFPNPNVEARMEILKIHSRKMNLMRGIDMLKIATDMNNCSGAEVKAVCTEAGMFALRE 402
Query: 438 GKANITLKEIDDSIDRIV 455
+ ++T ++ + ++ +++
Sbjct: 403 RRVHVTQEDFEMAVAKVM 420
WARNING: HSPs involving 479 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.134 0.379 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 676 636 0.00092 120 3 11 22 0.42 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 729
No. of states in DFA: 608 (65 KB)
Total size of DFA: 282 KB (2147 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 54.71u 0.07s 54.78t Elapsed: 00:00:03
Total cpu time: 54.80u 0.07s 54.87t Elapsed: 00:00:03
Start: Fri May 10 08:17:31 2013 End: Fri May 10 08:17:34 2013
WARNINGS ISSUED: 2