Your job contains 1 sequence.
>005818
MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNF
KFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK
ITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL
PVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTIL
HKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ
LGWYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHPRTSMAPAIEGKVDGHDTTFMLK
INNSSQSRMVVRASKSNSSRQKPFLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLEN
RSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLM
MNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRM
PISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNLSGIWNFTNPGVVS
HNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPELLSIKESLIK
NVFEPNKKPTFGGVAK
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005818
(676 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2202960 - symbol:RHM1 "rhamnose biosynthesis 1... 3004 3.5e-313 1
TAIR|locus:2099372 - symbol:RHM3 "rhamnose biosynthesis 3... 2961 1.3e-308 1
TAIR|locus:2024902 - symbol:MUM4 "MUCILAGE-MODIFIED 4" sp... 2940 2.1e-306 1
TAIR|locus:2015489 - symbol:NRS/ER "nucleotide-rhamnose s... 1271 1.5e-129 1
WB|WBGene00015298 - symbol:C01F1.3 species:6239 "Caenorha... 581 2.7e-92 2
DICTYBASE|DDB_G0279465 - symbol:tgds "putative dTDP-D-glu... 713 4.0e-85 2
MGI|MGI:1923605 - symbol:Tgds "TDP-glucose 4,6-dehydratas... 825 2.8e-82 1
RGD|1306544 - symbol:Tgds "TDP-glucose 4,6-dehydratase" s... 817 2.0e-81 1
UNIPROTKB|O95455 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 811 8.5e-81 1
UNIPROTKB|A6QLW2 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 807 2.2e-80 1
UNIPROTKB|F1RP60 - symbol:TGDS "Uncharacterized protein" ... 805 3.7e-80 1
UNIPROTKB|E2QWQ8 - symbol:TGDS "Uncharacterized protein" ... 803 6.0e-80 1
UNIPROTKB|G4MPV2 - symbol:MGG_09238 "Uncharacterized prot... 775 4.1e-79 2
UNIPROTKB|F1P029 - symbol:TGDS "Uncharacterized protein" ... 793 6.8e-79 1
TIGR_CMR|GSU_2366 - symbol:GSU_2366 "dTDP-glucose 4,6-deh... 700 4.9e-69 1
ZFIN|ZDB-GENE-030131-5718 - symbol:tgds "TDP-glucose 4,6-... 685 1.9e-67 1
TIGR_CMR|BA_1230 - symbol:BA_1230 "dTDP-glucose 4,6-dehyd... 683 3.1e-67 1
UNIPROTKB|P37777 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 638 1.8e-62 1
TIGR_CMR|SO_3188 - symbol:SO_3188 "dTDP-glucose 4,6-dehyd... 420 2.6e-62 2
UNIPROTKB|P55293 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 636 3.0e-62 1
UNIPROTKB|P27830 - symbol:rffG "dTDP-glucose 4,6-dehydrat... 633 6.2e-62 1
UNIPROTKB|P37759 - symbol:rfbB "RmlB" species:83333 "Esch... 631 1.0e-61 1
UNIPROTKB|P55294 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 628 2.1e-61 1
UNIPROTKB|P26391 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 624 5.5e-61 1
TIGR_CMR|CHY_0979 - symbol:CHY_0979 "dTDP-glucose 4,6-deh... 624 5.5e-61 1
UNIPROTKB|Q9ZAE8 - symbol:acbB "dTDP-glucose 4,6-dehydrat... 623 7.1e-61 1
UNIPROTKB|P37761 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 616 3.9e-60 1
UNIPROTKB|Q9S642 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 614 6.4e-60 1
UNIPROTKB|P0C7J0 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 609 2.2e-59 1
UNIPROTKB|B0RVL0 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 607 3.5e-59 1
UNIPROTKB|P44914 - symbol:rffG "dTDP-glucose 4,6-dehydrat... 596 5.1e-58 1
WB|WBGene00018737 - symbol:F53B1.4 species:6239 "Caenorha... 580 2.5e-56 1
CGD|CAL0000450 - symbol:GAL102 species:5476 "Candida albi... 578 4.2e-56 1
UNIPROTKB|Q59VY4 - symbol:TGD99 "Putative uncharacterized... 578 4.2e-56 1
TIGR_CMR|SO_3167 - symbol:SO_3167 "dTDP-glucose 4,6-dehyd... 548 6.3e-53 1
UNIPROTKB|P29782 - symbol:strE "dTDP-glucose 4,6-dehydrat... 540 4.4e-52 1
UNIPROTKB|P95780 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 540 4.4e-52 1
UNIPROTKB|O06329 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 532 3.1e-51 1
UNIPROTKB|A0QSK6 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 521 4.6e-50 1
DICTYBASE|DDB_G0274991 - symbol:DDB_G0274991 "NAD-depende... 489 1.1e-46 1
POMBASE|SPBPB2B2.11 - symbol:SPBPB2B2.11 "nucleotide-suga... 433 2.6e-40 1
TIGR_CMR|CJE_1513 - symbol:CJE_1513 "NAD-dependent epimer... 383 9.0e-35 1
TIGR_CMR|BA_0507 - symbol:BA_0507 "NAD-dependent epimeras... 345 1.3e-30 1
TIGR_CMR|CBU_0829 - symbol:CBU_0829 "NAD dependent epimer... 328 8.9e-29 1
UNIPROTKB|Q6MWV3 - symbol:galE1 "UDP-glucose 4-epimerase"... 322 4.0e-28 1
TAIR|locus:2053275 - symbol:UXS6 "UDP-XYL synthase 6" spe... 312 4.9e-27 1
TAIR|locus:2168539 - symbol:UXS3 "UDP-glucuronic acid dec... 312 4.9e-27 1
UNIPROTKB|F1SU22 - symbol:UXS1 "Uncharacterized protein" ... 307 1.7e-26 1
TAIR|locus:2078206 - symbol:UXS5 "UDP-XYL synthase 5" spe... 307 1.7e-26 1
UNIPROTKB|B3KV61 - symbol:UXS1 "UDP-glucuronate decarboxy... 306 2.2e-26 1
UNIPROTKB|E1BMI4 - symbol:UXS1 "Uncharacterized protein" ... 307 5.0e-26 1
UNIPROTKB|Q8NBZ7 - symbol:UXS1 "UDP-glucuronic acid decar... 306 1.1e-25 1
MGI|MGI:1915133 - symbol:Uxs1 "UDP-glucuronate decarboxyl... 306 1.1e-25 1
RGD|628680 - symbol:Uxs1 "UDP-glucuronate decarboxylase 1... 306 1.1e-25 1
UNIPROTKB|Q5PQX0 - symbol:Uxs1 "UDP-glucuronic acid decar... 306 1.1e-25 1
UNIPROTKB|Q8E8H8 - symbol:wcvA "UDP-glucuronate 4-epimera... 257 1.6e-25 2
TIGR_CMR|SO_4686 - symbol:SO_4686 "NAD dependent epimeras... 257 1.6e-25 2
UNIPROTKB|E1BV28 - symbol:UXS1 "Uncharacterized protein" ... 305 1.9e-25 1
TIGR_CMR|GSU_1815 - symbol:GSU_1815 "NAD-dependent epimer... 295 3.4e-25 1
UNIPROTKB|F1PU61 - symbol:UXS1 "Uncharacterized protein" ... 300 6.8e-25 1
TIGR_CMR|CBU_0844 - symbol:CBU_0844 "capsular polysacchar... 256 1.4e-24 2
TIGR_CMR|GSU_2241 - symbol:GSU_2241 "capsular polysacchar... 274 1.5e-24 2
TIGR_CMR|CBU_0677 - symbol:CBU_0677 "NAD dependent epimer... 288 1.9e-24 1
TAIR|locus:2081675 - symbol:AUD1 "AT3G62830" species:3702... 302 2.0e-24 1
TIGR_CMR|BA_5700 - symbol:BA_5700 "UDP-glucose 4-epimeras... 280 1.4e-23 1
UNIPROTKB|Q6T1X6 - symbol:rmd "GDP-6-deoxy-D-mannose redu... 279 1.8e-23 1
ZFIN|ZDB-GENE-020419-37 - symbol:uxs1 "UDP-glucuronic aci... 291 2.1e-23 1
WB|WBGene00005019 - symbol:sqv-1 species:6239 "Caenorhabd... 284 4.2e-22 1
TIGR_CMR|BA_5505 - symbol:BA_5505 "UDP-glucose 4-epimeras... 266 4.5e-22 1
TIGR_CMR|GSU_1975 - symbol:GSU_1975 "NAD-dependent epimer... 265 5.8e-22 1
UNIPROTKB|Q47Y09 - symbol:CPS_3643 "NAD-dependent epimera... 264 7.4e-22 1
TIGR_CMR|CPS_3643 - symbol:CPS_3643 "NAD-dependent epimer... 264 7.4e-22 1
UNIPROTKB|Q489C2 - symbol:CPS_0592 "Capsular polysacchari... 261 1.6e-21 1
TIGR_CMR|CPS_0592 - symbol:CPS_0592 "capsular polysacchar... 261 1.6e-21 1
TIGR_CMR|DET_0204 - symbol:DET_0204 "NAD-dependent epimer... 251 1.9e-20 1
FB|FBgn0035848 - symbol:CG7979 species:7227 "Drosophila m... 256 5.0e-19 1
TAIR|locus:2163401 - symbol:DUR "DEFECTIVE UGE IN ROOT" s... 187 5.6e-19 2
TAIR|locus:2204639 - symbol:MUR4 "MURUS 4" species:3702 "... 203 1.3e-18 2
UNIPROTKB|Q8ECF3 - symbol:wbpP "UDP-GlkcNAc C4 epimerase ... 243 1.4e-18 1
TIGR_CMR|SO_3189 - symbol:SO_3189 "polysaccharide biosynt... 243 1.4e-18 1
UNIPROTKB|Q9HTB6 - symbol:rmd "GDP-6-deoxy-D-mannose redu... 222 3.3e-18 2
TAIR|locus:2118711 - symbol:GAE1 "UDP-D-glucuronate 4-epi... 246 6.1e-18 1
UNIPROTKB|O53634 - symbol:gca "POSSIBLE GDP-MANNOSE 4,6-D... 232 6.2e-18 1
UNIPROTKB|Q0BYW6 - symbol:HNE_2639 "UDP-glucuronate 5'-ep... 233 2.9e-17 1
TAIR|locus:2126846 - symbol:GAE3 "UDP-D-glucuronate 4-epi... 237 6.5e-17 1
TIGR_CMR|CJE_1273 - symbol:CJE_1273 "UDP-glucose 4-epimer... 227 1.4e-16 1
TAIR|locus:2050921 - symbol:GAE4 "UDP-D-glucuronate 4-epi... 233 2.0e-16 1
TAIR|locus:2139134 - symbol:GAE5 "UDP-D-glucuronate 4-epi... 227 9.2e-16 1
TAIR|locus:2025472 - symbol:GAE2 "UDP-D-glucuronate 4-epi... 226 1.2e-15 1
UNIPROTKB|P09147 - symbol:galE species:83333 "Escherichia... 219 2.1e-15 1
TIGR_CMR|CHY_0545 - symbol:CHY_0545 "UDP-glucose 4-epimer... 216 3.7e-15 1
TAIR|locus:2076066 - symbol:GAE6 "UDP-D-glucuronate 4-epi... 222 3.9e-15 1
FB|FBgn0035147 - symbol:Gale "UDP-galactose 4'-epimerase"... 215 4.8e-15 2
UNIPROTKB|Q9KLH0 - symbol:VC_A0774 "UDP-glucose 4-epimera... 216 4.9e-15 1
TIGR_CMR|VC_A0774 - symbol:VC_A0774 "UDP-glucose 4-epimer... 216 4.9e-15 1
TIGR_CMR|CJE_1611 - symbol:CJE_1611 "GDP-mannose 4,6-dehy... 215 7.1e-15 1
POMBASE|SPBPB2B2.12c - symbol:gal10 species:4896 "Schizos... 185 3.9e-14 3
UNIPROTKB|Q6A1A4 - symbol:galE "UDP-galactose 4-epimerase... 208 4.4e-14 1
TIGR_CMR|GSU_0627 - symbol:GSU_0627 "GDP-fucose synthetas... 205 6.0e-14 1
TIGR_CMR|BA_3248 - symbol:BA_3248 "3-beta hydroxysteroid ... 193 6.2e-14 2
WARNING: Descriptions of 179 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2202960 [details] [associations]
symbol:RHM1 "rhamnose biosynthesis 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA;IMP] [GO:0050377
"UDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=IDA] [GO:0010315 "auxin
efflux" evidence=IMP] [GO:0051555 "flavonol biosynthetic process"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0009744 "response to sucrose
stimulus" evidence=RCA] [GO:0009813 "flavonoid biosynthetic
process" evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0009506 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010315 EMBL:AC007260
GO:GO:0051555 eggNOG:COG1091 GO:GO:0008831 GO:GO:0045226
EMBL:AY042833 EMBL:AY081471 IPI:IPI00543019 PIR:C96814
RefSeq:NP_177978.1 UniGene:At.198 UniGene:At.71030
ProteinModelPortal:Q9SYM5 SMR:Q9SYM5 IntAct:Q9SYM5 STRING:Q9SYM5
PaxDb:Q9SYM5 PRIDE:Q9SYM5 EnsemblPlants:AT1G78570.1 GeneID:844193
KEGG:ath:AT1G78570 TAIR:At1g78570 HOGENOM:HOG000167988
InParanoid:Q9SYM5 KO:K12450 OMA:IKFVDNR PhylomeDB:Q9SYM5
ProtClustDB:PLN02260 BioCyc:ARA:AT1G78570-MONOMER
BioCyc:MetaCyc:AT1G78570-MONOMER Genevestigator:Q9SYM5
GO:GO:0008460 GO:GO:0050377 GO:GO:0010280 GO:GO:0010253
TIGRFAMs:TIGR01181 Uniprot:Q9SYM5
Length = 669
Score = 3004 (1062.5 bits), Expect = 3.5e-313, P = 3.5e-313
Identities = 564/671 (84%), Positives = 613/671 (91%)
Query: 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNF 60
MA+ YTPKNILITGAAGFIASHV NRLI +YP+YKIVVLDKLDYCSNLKNLNPS+ SPNF
Sbjct: 1 MAS-YTPKNILITGAAGFIASHVANRLIRSYPDYKIVVLDKLDYCSNLKNLNPSKHSPNF 59
Query: 61 KFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 120
KF+KGD+ASADLV+ +L+TE IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK
Sbjct: 60 KFVKGDIASADLVNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 119
Query: 121 ITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 180
+TGQI+RFIHVSTDEVYGETDEDA+VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL
Sbjct: 120 VTGQIRRFIHVSTDEVYGETDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 179
Query: 181 PVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTIL 240
PVITTRGNNVYGPNQFPEKLIPKFILLAM+G+ LPIHGDGSNVRSYLYCEDVAEAF+ +L
Sbjct: 180 PVITTRGNNVYGPNQFPEKLIPKFILLAMRGQVLPIHGDGSNVRSYLYCEDVAEAFEVVL 239
Query: 241 HKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ 300
HKGEVGHVYNIGTKKERRV DVA DICKLF+++P+ IKFV+NRPFNDQRYFLD QKLK+
Sbjct: 240 HKGEVGHVYNIGTKKERRVNDVAKDICKLFNMDPEANIKFVDNRPFNDQRYFLDDQKLKK 299
Query: 301 LGWYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHPRTSMAPAIEGK-VDG-HDTTFM 358
LGW ER TWEEGL+KTM WY NP+WWGDVSGALLPHPR M P G+ DG D +
Sbjct: 300 LGWSERTTWEEGLKKTMDWYTQNPEWWGDVSGALLPHPRMLMMPG--GRHFDGSEDNSLA 357
Query: 359 LKINNS-SQSRMVVRASKSNSSRQKPFLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGR 417
++ SQ+ MVV + +SN + QKP LKFLIYG+TGWIGGLL KIC+K+GI +EYGKGR
Sbjct: 358 ATLSEKPSQTHMVVPSQRSNGTPQKPSLKFLIYGKTGWIGGLLGKICDKQGIAYEYGKGR 417
Query: 418 LENRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENG 477
LE+RS LL DIQ+VKPTHVFN+AGVTGRPNVDWCE+HK ETIR NV GTLTLADVCRE+G
Sbjct: 418 LEDRSSLLQDIQSVKPTHVFNSAGVTGRPNVDWCESHKTETIRANVAGTLTLADVCREHG 477
Query: 478 LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLR 537
LLMMN+ATGCIFEYD KHPEG+GIGFKEED PNFTGSFYSKTKAMVEELLKEYDNVCTLR
Sbjct: 478 LLMMNFATGCIFEYDDKHPEGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLR 537
Query: 538 VRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNLSGIWNFTNPG 597
VRMPISSDLNNPRNFITKISRYNKVVNIPNSMT+LDELLPIS+EMAKRNL GIWNFTNPG
Sbjct: 538 VRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLKGIWNFTNPG 597
Query: 598 VVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPELLSIKES 657
VVSHNEILEMY+ YI+P FKW NFTLEEQAKVIVAPRSNNE+DASKLKKEFPELLSIKES
Sbjct: 598 VVSHNEILEMYRDYINPEFKWANFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKES 657
Query: 658 LIKNVFEPNKK 668
LIK + PNKK
Sbjct: 658 LIKYAYGPNKK 668
>TAIR|locus:2099372 [details] [associations]
symbol:RHM3 "rhamnose biosynthesis 3" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=ISS;IDA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005913 Pfam:PF01370 Pfam:PF04321
InterPro:IPR016040 GO:GO:0005829 GO:GO:0009506 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016829 EMBL:AP002061 GO:GO:0008831
GO:GO:0045226 HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260
GO:GO:0010280 GO:GO:0010253 eggNOG:COG1088 EMBL:AY078958
EMBL:AY142060 IPI:IPI00525100 RefSeq:NP_188097.1 UniGene:At.27812
ProteinModelPortal:Q9LH76 SMR:Q9LH76 IntAct:Q9LH76 STRING:Q9LH76
PaxDb:Q9LH76 PRIDE:Q9LH76 EnsemblPlants:AT3G14790.1 GeneID:820707
KEGG:ath:AT3G14790 TAIR:At3g14790 InParanoid:Q9LH76 OMA:TARMNNI
PhylomeDB:Q9LH76 Genevestigator:Q9LH76 GermOnline:AT3G14790
Uniprot:Q9LH76
Length = 664
Score = 2961 (1047.4 bits), Expect = 1.3e-308, P = 1.3e-308
Identities = 550/668 (82%), Positives = 608/668 (91%)
Query: 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNF 60
MAT Y PKNILITGAAGFIASHV NRL+ +YP+YKIVVLDKLDYCSNLKNLNPS+ SPNF
Sbjct: 1 MAT-YKPKNILITGAAGFIASHVANRLVRSYPDYKIVVLDKLDYCSNLKNLNPSKSSPNF 59
Query: 61 KFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 120
KF+KGD+ASADLV+++L+TE+IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK
Sbjct: 60 KFVKGDIASADLVNYLLITEEIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 119
Query: 121 ITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 180
+TGQI+RFIHVSTDEVYGETDEDA VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL
Sbjct: 120 VTGQIRRFIHVSTDEVYGETDEDASVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 179
Query: 181 PVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTIL 240
PVITTRGNNVYGPNQFPEKLIPKFILLAM GKPLPIHGDGSNVRSYLYCEDVAEAF+ +L
Sbjct: 180 PVITTRGNNVYGPNQFPEKLIPKFILLAMNGKPLPIHGDGSNVRSYLYCEDVAEAFEVVL 239
Query: 241 HKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ 300
HKGEV HVYNIGT +ERRVIDVA DI KLF ++PD+ I++VENRPFNDQRYFLD QKLK+
Sbjct: 240 HKGEVNHVYNIGTTRERRVIDVANDISKLFGIDPDSTIQYVENRPFNDQRYFLDDQKLKK 299
Query: 301 LGWYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHPRTSMAPAIEGKVDGHDTTFMLK 360
LGW ER WEEGL+KTM+WY NP+WWGDVSGALLPHPR M P + DG D K
Sbjct: 300 LGWCERTNWEEGLRKTMEWYTENPEWWGDVSGALLPHPRMLMMPG-DRHSDGSDEH---K 355
Query: 361 INNSSQSRMVVRASKSNSSRQKPFLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLEN 420
+ +Q+ VV +K+ S K LKFLIYG+TGW+GGLL K+CEK+GIP+EYGKGRLE+
Sbjct: 356 NADGNQTFTVVTPTKAGCSGDKRSLKFLIYGKTGWLGGLLGKLCEKQGIPYEYGKGRLED 415
Query: 421 RSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLM 480
R+ L+ADI+++KP+HVFNAAG+TGRPNVDWCE+HK ETIR NV GTLTLADVCREN LLM
Sbjct: 416 RASLIADIRSIKPSHVFNAAGLTGRPNVDWCESHKTETIRVNVAGTLTLADVCRENDLLM 475
Query: 481 MNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRM 540
MN+ATGCIFEYDA HPEG+GIGFKEEDKPNFTGSFYSKTKAMVEELL+E+DNVCTLRVRM
Sbjct: 476 MNFATGCIFEYDAAHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREFDNVCTLRVRM 535
Query: 541 PISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNLSGIWNFTNPGVVS 600
PISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPIS+EMAKRNL GIWNFTNPGVVS
Sbjct: 536 PISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISIEMAKRNLRGIWNFTNPGVVS 595
Query: 601 HNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPELLSIKESLIK 660
HNEILEMYK+YI+P FKW+NF LEEQAKVIVAPRSNNE+D +KL KEFPE+LSIK+SLIK
Sbjct: 596 HNEILEMYKSYIEPDFKWSNFNLEEQAKVIVAPRSNNEMDGAKLSKEFPEMLSIKDSLIK 655
Query: 661 NVFEPNKK 668
VFEPNK+
Sbjct: 656 YVFEPNKR 663
>TAIR|locus:2024902 [details] [associations]
symbol:MUM4 "MUCILAGE-MODIFIED 4" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008152 "metabolic process" evidence=ISS] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010192 "mucilage
biosynthetic process" evidence=IMP] [GO:0010214 "seed coat
development" evidence=IMP] [GO:0010280 "UDP-L-rhamnose synthase
activity" evidence=ISS;IDA] [GO:0010253 "UDP-rhamnose biosynthetic
process" evidence=IDA] [GO:0010489
"UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity" evidence=TAS]
[GO:0010490 "UDP-4-keto-rhamnose-4-keto-reductase activity"
evidence=TAS] [GO:0050377 "UDP-glucose 4,6-dehydratase activity"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010214 EMBL:AC018748
EMBL:AC024260 GO:GO:0010192 GO:GO:0008831 GO:GO:0045226
HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260 GO:GO:0008460
GO:GO:0050377 GO:GO:0010280 GO:GO:0010253 TIGRFAMs:TIGR01181
EMBL:AJ565874 EMBL:AY328518 IPI:IPI00522138 PIR:B96575
RefSeq:NP_564633.2 UniGene:At.20215 ProteinModelPortal:Q9LPG6
SMR:Q9LPG6 STRING:Q9LPG6 PaxDb:Q9LPG6 PRIDE:Q9LPG6
EnsemblPlants:AT1G53500.1 GeneID:841785 KEGG:ath:AT1G53500
TAIR:At1g53500 eggNOG:COG1088 InParanoid:Q9LPG6 OMA:CESHKPE
PhylomeDB:Q9LPG6 BioCyc:MetaCyc:AT1G53500-MONOMER
Genevestigator:Q9LPG6 GermOnline:AT1G53500 GO:GO:0010489
GO:GO:0010490 Uniprot:Q9LPG6
Length = 667
Score = 2940 (1040.0 bits), Expect = 2.1e-306, P = 2.1e-306
Identities = 545/667 (81%), Positives = 604/667 (90%)
Query: 3 TVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKF 62
T Y PKNILITGAAGFIASHV NRLI NYP+YKIVVLDKLDYCS+LKNL+PS SPNFKF
Sbjct: 4 TTYKPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSDLKNLDPSFSSPNFKF 63
Query: 63 IKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKIT 122
+KGD+AS DLV+++L+TE IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK+T
Sbjct: 64 VKGDIASDDLVNYLLITENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 123
Query: 123 GQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 182
GQI+RFIHVSTDEVYGETDEDA VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV
Sbjct: 124 GQIRRFIHVSTDEVYGETDEDAAVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 183
Query: 183 ITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHK 242
ITTRGNNVYGPNQFPEK+IPKFILLAM GKPLPIHGDGSNVRSYLYCEDVAEAF+ +LHK
Sbjct: 184 ITTRGNNVYGPNQFPEKMIPKFILLAMSGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHK 243
Query: 243 GEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQLG 302
GE+GHVYN+GTK+ERRVIDVA DICKLF +P++ I+FVENRPFNDQRYFLD QKLK+LG
Sbjct: 244 GEIGHVYNVGTKRERRVIDVARDICKLFGKDPESSIQFVENRPFNDQRYFLDDQKLKKLG 303
Query: 303 WYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHPRTSMAPAIEGKV-DGHDTTFMLKI 361
W ER WE+GL+KTM WY NP+WWGDVSGALLPHPR M P G++ DG +
Sbjct: 304 WQERTNWEDGLKKTMDWYTQNPEWWGDVSGALLPHPRMLMMPG--GRLSDGSSEKKDVS- 360
Query: 362 NNSSQSRMVVRASKSNSSRQKPFLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENR 421
+N+ Q+ VV K+ S K LKFLIYG+TGW+GGLL K+CEK+GI +EYGKGRLE+R
Sbjct: 361 SNTVQTFTVV-TPKNGDSGDKASLKFLIYGKTGWLGGLLGKLCEKQGITYEYGKGRLEDR 419
Query: 422 SQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMM 481
+ L+ADI+++KPTHVFNAAG+TGRPNVDWCE+HKPETIR NV GTLTLADVCREN LLMM
Sbjct: 420 ASLVADIRSIKPTHVFNAAGLTGRPNVDWCESHKPETIRVNVAGTLTLADVCRENDLLMM 479
Query: 482 NYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMP 541
N+ATGCIFEYDA HPEG+GIGFKEEDKPNF GSFYSKTKAMVEELL+E+DNVCTLRVRMP
Sbjct: 480 NFATGCIFEYDATHPEGSGIGFKEEDKPNFFGSFYSKTKAMVEELLREFDNVCTLRVRMP 539
Query: 542 ISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNLSGIWNFTNPGVVSH 601
ISSDLNNPRNFITKISRYNKVV+IPNSMT+LDELLPIS+EMAKRNL GIWNFTNPGVVSH
Sbjct: 540 ISSDLNNPRNFITKISRYNKVVDIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSH 599
Query: 602 NEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPELLSIKESLIKN 661
NEILEMYK YI+PGFKW+NFT+EEQAKVIVA RSNNE+D SKL KEFPE+LSIKESL+K
Sbjct: 600 NEILEMYKNYIEPGFKWSNFTVEEQAKVIVAARSNNEMDGSKLSKEFPEMLSIKESLLKY 659
Query: 662 VFEPNKK 668
VFEPNK+
Sbjct: 660 VFEPNKR 666
>TAIR|locus:2015489 [details] [associations]
symbol:NRS/ER "nucleotide-rhamnose
synthase/epimerase-reductase" species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA;IDA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IEA] [GO:0008830 "dTDP-4-dehydrorhamnose 3,5-epimerase
activity" evidence=IDA] [GO:0019305 "dTDP-rhamnose biosynthetic
process" evidence=IDA] [GO:0010253 "UDP-rhamnose biosynthetic
process" evidence=IDA] [GO:0010489
"UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity" evidence=TAS]
[GO:0010490 "UDP-4-keto-rhamnose-4-keto-reductase activity"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
InterPro:IPR005913 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GO:GO:0005829 GO:GO:0005886 GO:GO:0009506 EMBL:AC011000
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0048046 GO:GO:0008831
GO:GO:0045226 GO:GO:0010253 GO:GO:0010489 GO:GO:0010490
GO:GO:0019305 GO:GO:0008830 EMBL:AF332445 EMBL:AY513232
IPI:IPI00546034 PIR:B96655 RefSeq:NP_564806.1 UniGene:At.70069
UniGene:At.71603 ProteinModelPortal:Q9LQ04 SMR:Q9LQ04 IntAct:Q9LQ04
STRING:Q9LQ04 PRIDE:Q9LQ04 DNASU:842603 EnsemblPlants:AT1G63000.1
GeneID:842603 KEGG:ath:AT1G63000 TAIR:At1g63000 InParanoid:Q9LQ04
KO:K12451 OMA:GAISHNE PhylomeDB:Q9LQ04 ProtClustDB:PLN02778
BioCyc:ARA:AT1G63000-MONOMER BioCyc:MetaCyc:AT1G63000-MONOMER
BRENDA:1.1.1.133 ArrayExpress:Q9LQ04 Genevestigator:Q9LQ04
Uniprot:Q9LQ04
Length = 301
Score = 1271 (452.5 bits), Expect = 1.5e-129, P = 1.5e-129
Identities = 239/300 (79%), Positives = 268/300 (89%)
Query: 369 MVVRASKSNSSRQKPFLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENRSQLLADI 428
MV A+ S+SS FLIYG+TGWIGGLL K+CE +GI + YG GRL++R ++ADI
Sbjct: 1 MVADANGSSSSS----FNFLIYGKTGWIGGLLGKLCEAQGITYTYGSGRLQDRQSIVADI 56
Query: 429 QNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCI 488
++VKP+HVFNAAGVTGRPNVDWCE+HK ETIRTNV GTLTLAD+CRE GL+++NYATGCI
Sbjct: 57 ESVKPSHVFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICREKGLVLINYATGCI 116
Query: 489 FEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNN 548
FEYD+ HP G+GIGFKEED PNFTGSFYSKTKAMVEELLK Y+NVCTLRVRMPISSDL N
Sbjct: 117 FEYDSGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLTN 176
Query: 549 PRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNLSGIWNFTNPGVVSHNEILEMY 608
PRNFITKI+RY KVV+IPNSMTILDELLPIS+EMAKRNL+GI+NFTNPGVVSHNEILEMY
Sbjct: 177 PRNFITKIARYEKVVDIPNSMTILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMY 236
Query: 609 KAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPELLSIKESLIKNVFEPNKK 668
+ YIDP F W NFTLEEQAKVIVAPRSNNELDA+KLK EFPEL+SIKESLIK VFEPNKK
Sbjct: 237 RDYIDPSFTWKNFTLEEQAKVIVAPRSNNELDATKLKTEFPELMSIKESLIKFVFEPNKK 296
>WB|WBGene00015298 [details] [associations]
symbol:C01F1.3 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0040011 GeneTree:ENSGT00530000063128 KO:K12450 GO:GO:0008460
eggNOG:COG1088 OMA:TARMNNI PANTHER:PTHR10366:SF41 HSSP:P26391
EMBL:FO080258 PIR:T15370 RefSeq:NP_001040727.1
ProteinModelPortal:Q17556 SMR:Q17556 STRING:Q17556
World-2DPAGE:0020:Q17556 PaxDb:Q17556 EnsemblMetazoa:C01F1.3a
GeneID:173762 KEGG:cel:CELE_C01F1.3 UCSC:C01F1.3a CTD:173762
WormBase:C01F1.3a HOGENOM:HOG000017218 InParanoid:Q17556
NextBio:880983 ArrayExpress:Q17556 Uniprot:Q17556
Length = 631
Score = 581 (209.6 bits), Expect = 2.7e-92, Sum P(2) = 2.7e-92
Identities = 119/322 (36%), Positives = 186/322 (57%)
Query: 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPS-RLSPNFKF 62
VYTPKN++ITG GFI S+ N + +P V +DKL S+ +N+ S R SP +K
Sbjct: 2 VYTPKNVVITGGCGFIGSNFVNYIHDAWPTCNFVNIDKLILNSDTQNVAESVRNSPRYKL 61
Query: 63 IKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKIT 122
+ D+ + + + +IDT++HFAA + + E +NN+ LE +
Sbjct: 62 VLTDIKNEAAILNVFEQNEIDTVIHFAADCTSTRCYNETAEAVQNNVLSFIQFLETVRTY 121
Query: 123 GQIKRFIHVSTDEVYGETD-EDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 181
G+IKRF+H+STDEVYG++D + G E S+L+P NPY+ATK E V AY Y LP
Sbjct: 122 GKIKRFVHISTDEVYGDSDLSENEQGKVEFSRLVPGNPYAATKIAGEAYVRAYQTQYNLP 181
Query: 182 VITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILH 241
++T R NN+YGPNQ+ K++P+FI +A I G G +RS+L+ +D + +
Sbjct: 182 IVTARMNNIYGPNQWDVKVVPRFIEIAKVRGEYTIQGSGKQLRSWLFVDDASAGLKAVCE 241
Query: 242 KGEVGHVYNIGTKKERRVIDVATDI-----CKLFSLNPDTQIKFVENRPFNDQRYFLDVQ 296
KGE+ +YN+GT E+ V D+A I +L + + K + +RP+ND RY + ++
Sbjct: 242 KGELHEIYNLGTYYEKNVADLAKTIQEEVDLQLGRAHEPPKYKSIPDRPYNDLRYLISIE 301
Query: 297 KLKQ-LGWYERVTWEEGLQKTM 317
K K LGW ++++G++ T+
Sbjct: 302 KAKNDLGWEPTTSFDDGMRHTV 323
Score = 358 (131.1 bits), Expect = 2.7e-92, Sum P(2) = 2.7e-92
Identities = 90/290 (31%), Positives = 153/290 (52%)
Query: 389 IYGRTGWIGGLLSKICEKKGIPFEYGKGRL--ENRSQLLADIQNVKPTHVFNAAGVTGRP 446
IYG G++G L + + IP+ ++ ++ ++ ++ + THV G T P
Sbjct: 339 IYGGKGYVGQELQHVLNDRHIPYVLATKKVGFDSDEEVERELALLGVTHVICVTGRTHGP 398
Query: 447 N---VDWCETHKPET---IRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTG 500
+++ E + +R N+ LA +CR+ GL TG +F YD +HP G G
Sbjct: 399 GCNTIEYLEGRADKVFINVRDNMYSATILAHMCRKLGLHYTYIGTGYMFAYDKEHPIG-G 457
Query: 501 IGFKEEDKPNFTGSFYSKTKAMVEELLKEY-----DNVCTLRVRMPISSDLNNPRNFITK 555
FKEED+P F GS YS K + + + +N+ +R+ +P+S DL PRN ++K
Sbjct: 458 AEFKEEDEPTFFGSAYSVVKGFTDRQMNYFNQNGWENL-NVRITLPLSLDLEQPRNLLSK 516
Query: 556 ISRYNKVVNIPNSMTILDELLPISVEMAKRNLSGIWNFTNPGVVSHNEILEMYKAYIDPG 615
I +Y ++ +IP S+TIL + + + ++ G N NP +S E++++YK +D
Sbjct: 517 IIKYKELFDIPVSLTILPDCMNAMCNLMEQRSGGTLNLVNPEPISLYEVVKIYKEIVDET 576
Query: 616 FKWTNFTLE-EQAKVIVAPRSNNELDASKLKKEFPELLSIKESLIKNVFE 664
T+ +E E+A+ ++A + N LD KL+ P +LS K+SLIK+ E
Sbjct: 577 VNPTSIGVETERAQHLLATKGNCALDTEKLQSLAP-VLSAKQSLIKHFSE 625
>DICTYBASE|DDB_G0279465 [details] [associations]
symbol:tgds "putative dTDP-D-glucose 4,6-dehydratase"
species:44689 "Dictyostelium discoideum" [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016829 "lyase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 dictyBase:DDB_G0279465 GO:GO:0000166
Gene3D:3.40.50.720 GenomeReviews:CM000152_GR GO:GO:0050662
GO:GO:0009225 EMBL:AAFI02000031 GO:GO:0008460 eggNOG:COG1088
HSSP:P27830 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
RefSeq:XP_641641.1 ProteinModelPortal:Q54WS6 STRING:Q54WS6
EnsemblProtists:DDB0231748 GeneID:8622047 KEGG:ddi:DDB_G0279465
ProtClustDB:CLSZ2430684 Uniprot:Q54WS6
Length = 434
Score = 713 (256.0 bits), Expect = 4.0e-85, Sum P(2) = 4.0e-85
Identities = 148/274 (54%), Positives = 188/274 (68%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
+ ILITG AGFI SH+ L + KI+VLDKLDYCSN+ NL NFKF KG++
Sbjct: 10 QKILITGGAGFIGSHLAIYLTKKFKNSKIIVLDKLDYCSNINNLGCVLKELNFKFYKGNI 69
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
++L+ I EKID ++H AA THVDNSF S +FT+NNI GTH LLE CK ++K+
Sbjct: 70 LDSELLENIFEKEKIDIVIHLAAYTHVDNSFKQSIKFTENNILGTHYLLETCK-NYKLKK 128
Query: 128 FIHVSTDEVYG----ETDED---AV-VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG 179
FI+VSTDEVYG E ++D ++ ++E S L PTNPYSA+KAGAE LV +Y +S+
Sbjct: 129 FIYVSTDEVYGSGLIEDNDDNNNSINQSSNEKSILNPTNPYSASKAGAEHLVQSYYKSFK 188
Query: 180 LPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTI 239
LPVI TR NN+YGP Q+PEK+IPKFI L + K IHG G N R+YLY +D+ AFD I
Sbjct: 189 LPVIITRANNIYGPKQYPEKIIPKFINLLLNNKKCTIHGTGKNTRNYLYIDDIVSAFDII 248
Query: 240 LHKGEVGHVYNIGTKKERRVIDVATDICKLFSLN 273
L KGE+G+VYNIGT E +DVA I + S+N
Sbjct: 249 LRKGEIGNVYNIGTDFEISNLDVAKKIINI-SIN 281
Score = 158 (60.7 bits), Expect = 4.0e-85, Sum P(2) = 4.0e-85
Identities = 23/50 (46%), Positives = 37/50 (74%)
Query: 278 IKFVENRPFNDQRYFLDVQKLKQLGWYERVTWEEGLQKTMKWYISNPDWW 327
I ++++RPFND RY ++ KL LGW + ++WEEG++KT WY +N ++W
Sbjct: 320 INYIDDRPFNDHRYNINYSKLSNLGWKKSISWEEGIEKTFIWYKNNRNYW 369
>MGI|MGI:1923605 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 MGI:MGI:1923605 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GeneTree:ENSGT00530000063128
GO:GO:0008460 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 HOVERGEN:HBG007741
OrthoDB:EOG4PVP08 EMBL:AK154341 EMBL:BC021419 IPI:IPI00405383
RefSeq:NP_083854.3 UniGene:Mm.251537 ProteinModelPortal:Q8VDR7
SMR:Q8VDR7 STRING:Q8VDR7 PhosphoSite:Q8VDR7 PRIDE:Q8VDR7
Ensembl:ENSMUST00000022727 GeneID:76355 KEGG:mmu:76355
InParanoid:Q3U4A6 NextBio:344957 Bgee:Q8VDR7 CleanEx:MM_TGDS
Genevestigator:Q8VDR7 GermOnline:ENSMUSG00000022130 Uniprot:Q8VDR7
Length = 355
Score = 825 (295.5 bits), Expect = 2.8e-82, P = 2.8e-82
Identities = 163/337 (48%), Positives = 222/337 (65%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
K +L+TG AGFIASHV L+ +YP+Y IV LDKLDYC++LKNL P N+KFI+GD+
Sbjct: 18 KRVLVTGGAGFIASHVIVSLVEDYPDYMIVNLDKLDYCASLKNLEPVSNKQNYKFIQGDI 77
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
+ V + EKID ++HFAAQTHVD SF +FEFT N+YGTHVL+ A G +++
Sbjct: 78 CDSHFVKLLFEVEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNAAYEAG-VEK 136
Query: 128 FIHVSTDEVYGET-DEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 186
FI+VSTDEVYG + D++ E+S PTNPY+++KA AE V +Y Y PV+ TR
Sbjct: 137 FIYVSTDEVYGGSLDQEF----DESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITR 192
Query: 187 GNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVG 246
+NVYGP+Q+PEK+IPKFI L + IHG G R++LY DV EAF T+L KGE G
Sbjct: 193 SSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQRRNFLYAADVVEAFLTVLTKGEPG 252
Query: 247 HVYNIGTKKERRVIDVATDICKLFS-LNPDTQ----IKFVENRPFNDQRYFLDVQKLKQL 301
+YNIGT E V+ +A ++ +L N +++ + +V +RP ND RY + +K+ L
Sbjct: 253 EIYNIGTNFEMSVVQLAKELIQLIKETNSESETESWVDYVSDRPHNDMRYPMKSEKIHSL 312
Query: 302 GWYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHP 338
GW +V WEEG++KT++WY N W + AL P P
Sbjct: 313 GWKPKVPWEEGIKKTVEWYRKNFHNWKNAEKALEPFP 349
>RGD|1306544 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 RGD:1306544
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0008460 PANTHER:PTHR10366:SF41 OMA:GFIASHM IPI:IPI00373689
Ensembl:ENSRNOT00000012925 UCSC:RGD:1306544 Uniprot:F1M7R7
Length = 355
Score = 817 (292.7 bits), Expect = 2.0e-81, P = 2.0e-81
Identities = 161/337 (47%), Positives = 221/337 (65%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
K +L+TG AGFIASHV L+ +YP Y I+ LDKLDYC++LKNL P N+KFI+GD+
Sbjct: 18 KRVLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLDYCASLKNLEPVSNKQNYKFIQGDI 77
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
+ V + +EKID ++HFAAQTHVD SF +FEFT N+YGTHVL+ ++++
Sbjct: 78 CDSHFVKRLFESEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNTA-YEARVEK 136
Query: 128 FIHVSTDEVYGET-DEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 186
FI+VSTDEVYG + D++ E+S PTNPY+++KA AE V +Y Y PV+ TR
Sbjct: 137 FIYVSTDEVYGGSLDQEF----DESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITR 192
Query: 187 GNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVG 246
+NVYGP+Q+PEK+IPKFI L + IHG G R++LY DV EAF T+L KGE G
Sbjct: 193 SSNVYGPHQYPEKVIPKFISLLQHDRKCCIHGSGLQRRNFLYAADVVEAFLTVLTKGEPG 252
Query: 247 HVYNIGTKKERRVIDVATDICKLFS-LNPDTQ----IKFVENRPFNDQRYFLDVQKLKQL 301
+YNIGT E V+ +A ++ +L N D++ + +V +RP ND RY + +K+ L
Sbjct: 253 EIYNIGTNFEMSVVQLAKELIQLIKETNSDSETERWVDYVSDRPHNDMRYPMKSEKIHSL 312
Query: 302 GWYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHP 338
GW +V WEEG++KT++WY N W + AL P P
Sbjct: 313 GWKPKVPWEEGIKKTVEWYRENFHNWKNAEKALEPFP 349
>UNIPROTKB|O95455 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AL359708 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
CTD:23483 HOVERGEN:HBG007741 OrthoDB:EOG4PVP08 EMBL:AJ006068
EMBL:AF048686 EMBL:AL139318 EMBL:BC033675 IPI:IPI00003774
RefSeq:NP_055120.1 UniGene:Hs.12393 ProteinModelPortal:O95455
SMR:O95455 IntAct:O95455 MINT:MINT-4773441 STRING:O95455
PhosphoSite:O95455 PRIDE:O95455 DNASU:23483 Ensembl:ENST00000261296
GeneID:23483 KEGG:hsa:23483 UCSC:uc001vlw.3 GeneCards:GC13M095226
HGNC:HGNC:20324 HPA:HPA039927 HPA:HPA040857 neXtProt:NX_O95455
PharmGKB:PA128395791 InParanoid:O95455 PhylomeDB:O95455
GenomeRNAi:23483 NextBio:45843 ArrayExpress:O95455 Bgee:O95455
CleanEx:HS_TGDS Genevestigator:O95455 GermOnline:ENSG00000088451
Uniprot:O95455
Length = 350
Score = 811 (290.5 bits), Expect = 8.5e-81, P = 8.5e-81
Identities = 159/337 (47%), Positives = 223/337 (66%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
K +L+TG AGFIASH+ L+ +YP Y I+ LDKLDYC++LKNL N+KFI+GD+
Sbjct: 18 KRVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDI 77
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
+ V + TEKID ++HFAAQTHVD SF +FEFT N+YGTHVL+ A ++++
Sbjct: 78 CDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAH-EARVEK 136
Query: 128 FIHVSTDEVYGET-DEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 186
FI+VSTDEVYG + D++ E+S PTNPY+++KA AE V +Y Y PV+ TR
Sbjct: 137 FIYVSTDEVYGGSLDKEF----DESSPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITR 192
Query: 187 GNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVG 246
+NVYGP+Q+PEK+IPKFI L + IHG G R++LY DV EAF T+L KG+ G
Sbjct: 193 SSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKKGKPG 252
Query: 247 HVYNIGTKKERRVIDVATDICKLFS-LNPDTQIK----FVENRPFNDQRYFLDVQKLKQL 301
+YNIGT E V+ +A ++ +L N +++++ +V +RP ND RY + +K+ L
Sbjct: 253 EIYNIGTNFEMSVVQLAKELIQLIKETNSESEMENWVDYVNDRPTNDMRYPMKSEKIHGL 312
Query: 302 GWYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHP 338
GW +V W+EG++KT++WY N W +V AL P P
Sbjct: 313 GWRPKVPWKEGIKKTIEWYRENFHNWKNVEKALEPFP 349
>UNIPROTKB|A6QLW2 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9913
"Bos taurus" [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
EMBL:BC148106 IPI:IPI00704940 RefSeq:NP_001094629.1
UniGene:Bt.41863 ProteinModelPortal:A6QLW2 STRING:A6QLW2
Ensembl:ENSBTAT00000006984 GeneID:534594 KEGG:bta:534594 CTD:23483
HOVERGEN:HBG007741 InParanoid:A6QLW2 OrthoDB:EOG4PVP08
NextBio:20876459 Uniprot:A6QLW2
Length = 355
Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
Identities = 158/337 (46%), Positives = 223/337 (66%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
K +L+TG AGFIASH+ L+ +YP Y I+ LDKLDYC++LKNL N+KFI+GD+
Sbjct: 18 KRVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDI 77
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
+ V + TEKID ++HFAAQTHVD SF +FEFT N+YGTHVL+ A ++++
Sbjct: 78 CDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAH-EARVEK 136
Query: 128 FIHVSTDEVYGET-DEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 186
FI+VSTDEVYG + D++ E+S PTNPY+++KA AE V +Y Y PV+ TR
Sbjct: 137 FIYVSTDEVYGGSLDKEF----DESSPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITR 192
Query: 187 GNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVG 246
+NVYGP+Q+PEK+IPKFI L + IHG G R++LY DV EAF T+L KG+ G
Sbjct: 193 SSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGTGLQTRNFLYATDVVEAFLTVLKKGKPG 252
Query: 247 HVYNIGTKKERRVIDVATDICKLFS-LNPDTQIK----FVENRPFNDQRYFLDVQKLKQL 301
+YNIGT E V+ +A ++ +L N +++++ +V++RP ND RY + +K+ L
Sbjct: 253 EIYNIGTNFEMSVLQLAKELIQLIKETNSESEMENWVDYVDDRPTNDMRYPMKSEKIHGL 312
Query: 302 GWYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHP 338
GW +V W+EG++KT++WY N W + AL P P
Sbjct: 313 GWRPKVPWKEGIKKTIEWYRENFHNWKNAEKALEPFP 349
>UNIPROTKB|F1RP60 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM EMBL:CU986273
RefSeq:XP_003131096.2 Ensembl:ENSSSCT00000010407 GeneID:100517301
KEGG:ssc:100517301 Uniprot:F1RP60
Length = 355
Score = 805 (288.4 bits), Expect = 3.7e-80, P = 3.7e-80
Identities = 160/337 (47%), Positives = 218/337 (64%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
K +L+TG AGFIASHV L+ +YP Y IV LDKLDYC++LKNL N+KFI+GD+
Sbjct: 18 KRVLVTGGAGFIASHVIVSLVEDYPNYMIVNLDKLDYCASLKNLETISDKQNYKFIQGDI 77
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
+ V + TEKID ++HFAAQTHVD SF +FEFT N+YGTHVLL A ++++
Sbjct: 78 CDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLLSAAH-EARVEK 136
Query: 128 FIHVSTDEVYGET-DEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 186
FI+VSTDEVYG + D++ E+S PTNPY+++KA AE V +Y Y PV+ TR
Sbjct: 137 FIYVSTDEVYGGSLDKEF----DESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITR 192
Query: 187 GNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVG 246
+NVYGP+Q+PEK+IPKFI L + IHG G R++LY DV EAF T+L KG+ G
Sbjct: 193 SSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKKGKPG 252
Query: 247 HVYNIGTKKERRVIDVATDICKLFSLNP-----DTQIKFVENRPFNDQRYFLDVQKLKQL 301
+YNIGT E V+ +A ++ +L + + +V +RP ND RY + +K+ L
Sbjct: 253 EIYNIGTNFEMSVLQLAKELIQLIKETKSESEMENWVDYVNDRPTNDMRYPMKSEKIHGL 312
Query: 302 GWYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHP 338
GW +V W+EG++KT++WY N W + AL P P
Sbjct: 313 GWRPKVPWKEGIKKTIEWYRENFHNWKNAEKALEPFP 349
>UNIPROTKB|E2QWQ8 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 EMBL:AAEX03013308
RefSeq:XP_542640.3 Ensembl:ENSCAFT00000008577 GeneID:485521
KEGG:cfa:485521 Uniprot:E2QWQ8
Length = 355
Score = 803 (287.7 bits), Expect = 6.0e-80, P = 6.0e-80
Identities = 158/337 (46%), Positives = 219/337 (64%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
K +L+TG AGFIASHV L+ +YP Y I+ LDKLDYC++LKNL N+KFI+GD+
Sbjct: 18 KRLLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDI 77
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
++ V + TEKID ++HFAAQTHVD SF +FEFT N+YGTHVL+ A ++++
Sbjct: 78 CNSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAH-EARVEK 136
Query: 128 FIHVSTDEVYGET-DEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 186
FI+VSTDEVYG + D++ E+S PTNPY+++KA AE V +Y Y P + TR
Sbjct: 137 FIYVSTDEVYGGSLDKEF----DESSPKQPTNPYASSKAAAECFVQSYWERYKFPAVITR 192
Query: 187 GNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVG 246
+NVYGP+Q+PEK+IPKFI L + IHG G R++LY DV EAF T+L KG+ G
Sbjct: 193 SSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKKGKPG 252
Query: 247 HVYNIGTKKERRVIDVATDICKLFSLNP-----DTQIKFVENRPFNDQRYFLDVQKLKQL 301
+YNIGT E V+ +A ++ +L +T + +V +RP ND RY + +K++ L
Sbjct: 253 EIYNIGTNFEMSVLQLAKELIQLIKETSSESEMETWVDYVNDRPTNDMRYPMKSEKIQGL 312
Query: 302 GWYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHP 338
GW +V W+EG++KT+ WY N W + AL P P
Sbjct: 313 GWRPKVPWKEGIKKTIDWYRENFHNWKNAEKALEPFP 349
>UNIPROTKB|G4MPV2 [details] [associations]
symbol:MGG_09238 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR005913 Pfam:PF04321 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 EMBL:CM001231 GO:GO:0008831
GO:GO:0045226 RefSeq:XP_003709861.1 ProteinModelPortal:G4MPV2
EnsemblFungi:MGG_09238T0 GeneID:2680178 KEGG:mgr:MGG_09238
Uniprot:G4MPV2
Length = 292
Score = 775 (277.9 bits), Expect = 4.1e-79, Sum P(2) = 4.1e-79
Identities = 152/287 (52%), Positives = 205/287 (71%)
Query: 386 KFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGR 445
+FLI+G GW+ G L+ I + +G R+ENR +LA+++ VKPTHV N AG TGR
Sbjct: 5 RFLIWGGEGWVAGHLASILKSQGKDVYTTTVRMENREGVLAELEKVKPTHVLNCAGCTGR 64
Query: 446 PNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIGFKE 505
PNVDWCE +K T+R+NV+GTL L D C + G+ +ATGCI++YD HP G GF E
Sbjct: 65 PNVDWCEDNKEATMRSNVIGTLNLTDACFQKGIHCTVFATGCIYQYDDAHP-WDGPGFLE 123
Query: 506 EDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNI 565
DK NF GSFYS+TKA VEE++K Y+N LR+RMP+S DL+ PRNF+TKI++Y++VV+I
Sbjct: 124 TDKANFAGSFYSETKAHVEEVMKYYNNCLILRLRMPVSDDLH-PRNFVTKIAKYDRVVDI 182
Query: 566 PNSMTILDELLPISVEMAKRNLSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEE 625
PNS TIL +LLP+S+ MA+ +G++NFTNPG +SHNE+L +++ + P FKW NF+LEE
Sbjct: 183 PNSNTILHDLLPLSLAMAEHKDTGVYNFTNPGAISHNEVLTLFRDIVRPSFKWQNFSLEE 242
Query: 626 QAKVIVAPRSNNELDASKLK---KEFP-ELLSIKESLIKNVFEPNKK 668
QAKVI A RSN +LD +KL KE+ E+ I E+ + FE KK
Sbjct: 243 QAKVIKAGRSNCKLDTTKLTEKAKEYGIEVPEIHEAY-RQCFERMKK 288
Score = 39 (18.8 bits), Expect = 4.1e-79, Sum P(2) = 4.1e-79
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 6 TPKNILITGAAGFIASHVCNRL 27
T LI G G++A H+ + L
Sbjct: 2 TNNRFLIWGGEGWVAGHLASIL 23
>UNIPROTKB|F1P029 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 PANTHER:PTHR10366:SF41
OMA:GFIASHM EMBL:AADN02029320 IPI:IPI00594682
Ensembl:ENSGALT00000027315 Uniprot:F1P029
Length = 365
Score = 793 (284.2 bits), Expect = 6.8e-79, P = 6.8e-79
Identities = 155/339 (45%), Positives = 222/339 (65%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
K +L+TG AGFIASHV L+ NYP Y I+ LDKLDYC++LKNL N+KFI+GD+
Sbjct: 23 KRLLVTGGAGFIASHVVVSLVRNYPNYLIINLDKLDYCASLKNLETVSEKENYKFIQGDI 82
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
+ + TEKID ++HFAAQTHVD SF ++ EFT N+YGT+VL+ A +++
Sbjct: 83 CEPHFIKQLFETEKIDIVLHFAAQTHVDLSFWHALEFTYVNVYGTNVLVAAAH-EANVEK 141
Query: 128 FIHVSTDEVYG-ETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 186
F++VSTDEVYG TD++ E+S PTNPY+++KA AE V +Y Y PV+ TR
Sbjct: 142 FVYVSTDEVYGGSTDQEF----DESSPKCPTNPYASSKAAAECFVQSYWERYQFPVVITR 197
Query: 187 GNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVG 246
+NVYGP+Q+PEK+IPKFI L + + IHG G R++LY DV EAF T+L +G+ G
Sbjct: 198 SSNVYGPHQYPEKVIPKFISLLQQNRKCCIHGSGLQRRNFLYATDVVEAFLTVLKEGKPG 257
Query: 247 HVYNIGTKKERRVIDVATDICKLFS-LNPDTQIK----FVENRPFNDQRYFLDVQKLKQL 301
+YNIGT E ++ +A ++ L + +++++ +V++RP ND RY + +K+ L
Sbjct: 258 EIYNIGTNFEMSIVQLAKELIHLIKKTSSESEMEHWMDYVKDRPTNDLRYPMSSEKMHNL 317
Query: 302 GWYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHPRT 340
GW +V W+EG++KT++WY N W + AL P P T
Sbjct: 318 GWRPKVPWKEGIKKTIEWYKENFHNWKNAEKALEPFPMT 356
>TIGR_CMR|GSU_2366 [details] [associations]
symbol:GSU_2366 "dTDP-glucose 4,6-dehydratase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 HSSP:P26391 OMA:IQYVKDR RefSeq:NP_953413.1
ProteinModelPortal:Q74AI8 SMR:Q74AI8 GeneID:2686639
KEGG:gsu:GSU2366 PATRIC:22027581 ProtClustDB:CLSK828808
BioCyc:GSUL243231:GH27-2368-MONOMER Uniprot:Q74AI8
Length = 358
Score = 700 (251.5 bits), Expect = 4.9e-69, P = 4.9e-69
Identities = 148/347 (42%), Positives = 214/347 (61%)
Query: 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNF 60
M ++P +L+TG AGFI S+ N + P +++ LD L Y NL+NL +P +
Sbjct: 1 MGDTFSPSAVLVTGGAGFIGSNFINHFLPANPGCRVINLDILTYAGNLRNLTAVEQNPAY 60
Query: 61 KFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 120
+F+KGD+ ADLV IL E+ID ++HFAA++HVD S F + N+ GT VLLE +
Sbjct: 61 RFVKGDIGDADLVRRILAEERIDAVVHFAAESHVDRSILGPEIFVRTNVLGTQVLLEESR 120
Query: 121 I---TGQIKRF--IHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYG 175
+G I+RF +HVSTDEVYG E E + L P +PYSA+KAG+++LV AY
Sbjct: 121 RHWESGAIERFRFLHVSTDEVYGTLGETGYFT--EETPLAPNSPYSASKAGSDLLVRAYN 178
Query: 176 RSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEA 235
++GLPV+TTR +N YGP QFPEKLIP I + GKPLP++GDG NVR +L+ +D + A
Sbjct: 179 ETFGLPVLTTRCSNNYGPFQFPEKLIPLMIHNIVAGKPLPVYGDGRNVRDWLHVKDHSTA 238
Query: 236 FDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLN---PDTQ----IKFVENRPFND 288
+T+L G+ G V+N+G E ID+ +C L P + I FV++R +D
Sbjct: 239 IETVLKGGKPGEVFNVGGNNEWFNIDIVHLLCDLLDERLGRPGGESRGLITFVKDRLGHD 298
Query: 289 QRYFLDVQKLK-QLGWYERVTWEEGLQKTMKWYISNPDWWGDV-SGA 333
+RY + K+K +LGW T+E G+ +T+ WY++N W +V SG+
Sbjct: 299 RRYAISAAKIKRELGWEPSYTFERGIAETVDWYLANRAWVDEVTSGS 345
>ZFIN|ZDB-GENE-030131-5718 [details] [associations]
symbol:tgds "TDP-glucose 4,6-dehydratase"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-030131-5718 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GO:GO:0008460 PANTHER:PTHR10366:SF41
HOVERGEN:HBG007741 HSSP:P26391 EMBL:BC066615 IPI:IPI00496965
UniGene:Dr.80538 ProteinModelPortal:Q6NYF5 Uniprot:Q6NYF5
Length = 347
Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
Identities = 135/329 (41%), Positives = 204/329 (62%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
+ +L+TG AGFI SH+ L G +P ++I+ +D L YCSNLKNL + S ++ FI GDV
Sbjct: 7 RTVLVTGGAGFIGSHLICALAGRFPHWRIINVDNLQYCSNLKNLRSVQASSSYSFIPGDV 66
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
+ + TE ID + H AA+THV+NSF F + N+ GT VL+ A + ++R
Sbjct: 67 CDPLFIKHLFSTEHIDVVFHCAAETHVENSFVCPSRFMRVNVDGTAVLVRA-SLEASVQR 125
Query: 128 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 187
FI++STDEVYG++ + E S PTNPYS +KA AE +V +Y + P + TR
Sbjct: 126 FIYISTDEVYGDSVDQPF---DELSPKRPTNPYSRSKAAAESIVTSYWLKHKFPAVITRS 182
Query: 188 NNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGH 247
+NVYGP Q EK+IP+F+ L + + I G G R +LY DV +AF T++ KG +G
Sbjct: 183 SNVYGPRQHHEKVIPRFLSLLQQQQKCTIQGSGLQSRHFLYVSDVTDAFLTVMEKGILGE 242
Query: 248 VYNIGTKKERRVIDVATDICKLF--SLNP---DTQIKFVENRPFNDQRYFLDVQKLKQLG 302
+YNIGT E +I +A ++ ++ S++ D ++FVE+RP + RY ++ KL +LG
Sbjct: 243 IYNIGTGFEIPIIQLARELVQMTVKSVSAESLDDWLEFVEDRPVTELRYPMNSVKLHRLG 302
Query: 303 WYERVTWEEGLQKTMKWYISNPDWWGDVS 331
W +V W EG+++T++WY NP++W +S
Sbjct: 303 WRPKVAWTEGIRRTVQWYEENPNYWPIIS 331
>TIGR_CMR|BA_1230 [details] [associations]
symbol:BA_1230 "dTDP-glucose 4,6-dehydratase"
species:198094 "Bacillus anthracis str. Ames" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009243
"O antigen biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0009225
GO:GO:0008460 TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006
KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM RefSeq:NP_843702.1
RefSeq:YP_017844.1 RefSeq:YP_027409.1 PDB:4EGB PDBsum:4EGB
ProteinModelPortal:Q81TP0 SMR:Q81TP0 DNASU:1085406
EnsemblBacteria:EBBACT00000011863 EnsemblBacteria:EBBACT00000016310
EnsemblBacteria:EBBACT00000023983 GeneID:1085406 GeneID:2815086
GeneID:2848339 KEGG:ban:BA_1230 KEGG:bar:GBAA_1230 KEGG:bat:BAS1137
ProtClustDB:CLSK916141 BioCyc:BANT260799:GJAJ-1213-MONOMER
BioCyc:BANT261594:GJ7F-1267-MONOMER Uniprot:Q81TP0
Length = 322
Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
Identities = 134/321 (41%), Positives = 199/321 (61%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVA 68
NIL+TG AGFI S+ + ++ +Y YKI+ D L Y NL N+ + PN+ F+KG++
Sbjct: 2 NILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQ 61
Query: 69 SADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRF 128
+ +L+ ++ + I++FAA++HVD S N F N+ GT LLE K IK
Sbjct: 62 NGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIK-L 120
Query: 129 IHVSTDEVYGETDEDAVVGNH-EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 187
+ VSTDEVYG + G E + L P +PYS++KA A+M+ +AY ++Y LPVI TR
Sbjct: 121 VQVSTDEVYGSLGK---TGRFTEETPLAPNSPYSSSKASADMIALAYYKTYQLPVIVTRC 177
Query: 188 NNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGH 247
+N YGP Q+PEKLIP + A++GK LP++GDG NVR +L+ D A D +LHKG VG
Sbjct: 178 SNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGRVGE 237
Query: 248 VYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLK-QLGWYER 306
VYNIG E+ ++V I L I++V +R +D+RY ++ +K+K + W +
Sbjct: 238 VYNIGGNNEKTNVEVVEQIITLLG-KTKKDIEYVTDRLGHDRRYAINAEKMKNEFDWEPK 296
Query: 307 VTWEEGLQKTMKWYISNPDWW 327
T+E+GLQ+T++WY N +WW
Sbjct: 297 YTFEQGLQETVQWYEKNEEWW 317
>UNIPROTKB|P37777 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:623
"Shigella flexneri" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:X71970
EMBL:AE005674 EMBL:AE014073 GenomeReviews:AE005674_GR
GenomeReviews:AE014073_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF EMBL:L14842 PIR:S41534
RefSeq:NP_707936.1 RefSeq:NP_837663.1 ProteinModelPortal:P37777
SMR:P37777 EnsemblBacteria:EBESCT00000086479
EnsemblBacteria:EBESCT00000092444 GeneID:1025931 GeneID:1078528
KEGG:sfl:SF2104 KEGG:sfx:S2227 PATRIC:18705961 Uniprot:P37777
Length = 361
Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
Identities = 144/346 (41%), Positives = 204/346 (58%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
IL+TG AGFI S V +I N + +V +DKL Y NL++L S + F D+
Sbjct: 3 ILVTGGAGFIGSAVVRHIINNTQD-SVVNVDKLTYAGNLESLADVSDSERYAFEHADICD 61
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK-----ITGQ 124
A + I + D +MH AA++HVD S F + NI GT+VLLEA + + +
Sbjct: 62 AVAMSRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALNDE 121
Query: 125 IK---RFIHVSTDEVYGETDEDAVVGNHEASQLL-------PTNPYSATKAGAEMLVMAY 174
K RF H+STDEVYG+ N+EA L P++PYSA+KA ++ LV A+
Sbjct: 122 KKKSFRFHHISTDEVYGDLPHPDEANNNEALPLFTETTAYAPSSPYSASKASSDHLVRAW 181
Query: 175 GRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAE 234
R+YGLP I T +N YGP FPEKLIP IL A++GK LPI+G G +R +LY ED A
Sbjct: 182 KRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHAR 241
Query: 235 AFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFS-LNPDT-----QIKFVENRPFND 288
A T++ +G+ G YNIG E++ IDV IC L + P QI +V +RP +D
Sbjct: 242 ALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGHD 301
Query: 289 QRYFLDVQKL-KQLGWYERVTWEEGLQKTMKWYISNPDWWGDV-SG 332
+RY +D K+ ++LGW + T+E G++KT++WY++N +W +V SG
Sbjct: 302 RRYAIDADKISRELGWKPQETFESGIRKTVEWYLANTNWVENVKSG 347
>TIGR_CMR|SO_3188 [details] [associations]
symbol:SO_3188 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 HSSP:P26391 RefSeq:NP_718744.1
ProteinModelPortal:Q8ECF4 SMR:Q8ECF4 GeneID:1170881
KEGG:son:SO_3188 PATRIC:23526058 OMA:NAARATW Uniprot:Q8ECF4
Length = 375
Score = 420 (152.9 bits), Expect = 2.6e-62, Sum P(2) = 2.6e-62
Identities = 83/184 (45%), Positives = 120/184 (65%)
Query: 150 EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAM 209
E + P++PYSA+KA ++ LV A+ R+YG P I T +N YGP FPEKLIP IL A+
Sbjct: 175 ETTPYTPSSPYSASKASSDHLVRAWLRTYGFPTIVTNCSNNYGPYHFPEKLIPLVILNAL 234
Query: 210 KGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKL 269
+GKPLPI+G G +R +LY ED A A ++ +G+VG YNIG E+R ++V IC +
Sbjct: 235 EGKPLPIYGKGDQIRDWLYVEDHARALFKVVTEGKVGETYNIGGHNEKRNLEVVQTICSI 294
Query: 270 F-SLNPDT-----QIKFVENRPFNDQRYFLDVQKLK-QLGWYERVTWEEGLQKTMKWYIS 322
SL P QI +V +RP +D+RY +D K+ +L W + T+E GL+KT++WY++
Sbjct: 295 LDSLVPKNTPYAEQIAYVADRPGHDRRYAIDATKMSAELDWQPQETFETGLRKTVEWYLA 354
Query: 323 NPDW 326
N +W
Sbjct: 355 NQEW 358
Score = 244 (91.0 bits), Expect = 2.6e-62, Sum P(2) = 2.6e-62
Identities = 60/153 (39%), Positives = 84/153 (54%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
IL+TG AGFI S V +IGN + +V +DKL Y NL++L SP + F K D+
Sbjct: 3 ILVTGGAGFIGSAVVRHIIGNTQDC-VVNVDKLTYAGNLESLTSVADSPRYTFEKVDICD 61
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK-----ITGQ 124
+ + + D +MH AA++HVD S S +F + NI GT+ LLEA + + +
Sbjct: 62 RTELERVFSLHQPDAVMHLAAESHVDRSITGSADFIQTNIVGTYTLLEAARHYWMQLNTE 121
Query: 125 IK---RFIHVSTDEVYGETDEDAVVGNHEASQL 154
K RF H+STDEVYG+ + N E S L
Sbjct: 122 RKSAFRFHHISTDEVYGDLPHPDEI-NVECSML 153
>UNIPROTKB|P55293 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:562
"Escherichia coli" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AF125322
GO:GO:0009103 GO:GO:0045226 GO:GO:0009243 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
PANTHER:PTHR10366:SF41 PIR:S78542 ProteinModelPortal:P55293
SMR:P55293 PRIDE:P55293 SABIO-RK:P55293 Uniprot:P55293
Length = 361
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 143/347 (41%), Positives = 206/347 (59%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
IL+TG AGFI S V +I N + +V +DKL Y NL++L S + F D+
Sbjct: 3 ILVTGGAGFIGSAVVRHIINNTQD-SVVNVDKLTYAGNLESLAEISDSERYSFENADICD 61
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK-----ITGQ 124
A+ ++D +MH AA++HVD S F + NI GT+VLLEA + + +
Sbjct: 62 AEGDGLYFGQHQLDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSGLDDE 121
Query: 125 IK---RFIHVSTDEVYGETDEDAVVGNHEASQLL-------PTNPYSATKAGAEMLVMAY 174
K RF H+STDEVYG+ V ++E QL P++PYSA+KA ++ LV A+
Sbjct: 122 KKKNFRFHHISTDEVYGDLPHPDEVNSNETLQLFTETTAYAPSSPYSASKASSDHLVRAW 181
Query: 175 GRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAE 234
R+YGLP I + +N YGP FPEKLIP IL A++GK LPI+G G +R +LY ED A
Sbjct: 182 KRTYGLPTIVSNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHAR 241
Query: 235 AFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFS-LNPDT-----QIKFVENRPFND 288
A T++ +G+ G YNIG E++ IDV IC L + P QI +V +RP +D
Sbjct: 242 ALYTVVTEGKAGETYNIGGHNEKKNIDVVFTICDLLDEIVPKEKSYREQITYVADRPGHD 301
Query: 289 QRYFLDVQKL-KQLGWYERVTWEEGLQKTMKWYISNPDWWGDV-SGA 333
+RY +D K+ ++LGW + T+E G++KT++WY++N +W +V SGA
Sbjct: 302 RRYAIDADKISRELGWKPQETFESGIRKTVEWYLANTNWVENVKSGA 348
>UNIPROTKB|P27830 [details] [associations]
symbol:rffG "dTDP-glucose 4,6-dehydratase 2" species:83333
"Escherichia coli K-12" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IDA] [GO:0009103 "lipopolysaccharide biosynthetic process"
evidence=IEA;IDA] [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=IEA;IDA] [GO:0009243 "O antigen biosynthetic
process" evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
Pfam:PF01370 UniPathway:UPA00124 UniPathway:UPA00281
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009103 EMBL:M87049 OMA:RAYRQQM
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
eggNOG:COG1088 GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 PIR:G65182 RefSeq:YP_026255.1
RefSeq:YP_491651.1 PDB:1BXK PDBsum:1BXK ProteinModelPortal:P27830
SMR:P27830 PRIDE:P27830 EnsemblBacteria:EBESCT00000002573
EnsemblBacteria:EBESCT00000015511 GeneID:12933083 GeneID:948300
KEGG:ecj:Y75_p3387 KEGG:eco:b3788 PATRIC:32123069 EchoBASE:EB1422
EcoGene:EG11453 ProtClustDB:PRK10217
BioCyc:EcoCyc:DTDPGLUCDEHYDRAT2-MONOMER
BioCyc:ECOL316407:JW5598-MONOMER
BioCyc:MetaCyc:DTDPGLUCDEHYDRAT2-MONOMER EvolutionaryTrace:P27830
Genevestigator:P27830 Uniprot:P27830
Length = 355
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 144/345 (41%), Positives = 201/345 (58%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
+ ILITG AGFI S + +I N +VV+DKL Y NL +L P S F F K D+
Sbjct: 2 RKILITGGAGFIGSALVRYII-NETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDI 60
Query: 68 AS-ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK-----I 121
A+L + + D +MH AA++HVD S F + NI GT+ LLEA + +
Sbjct: 61 CDRAELAR-VFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNAL 119
Query: 122 TGQIK---RFIHVSTDEVYGE--TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGR 176
T K RF H+STDEVYG+ + +D E + P++PYSA+KA ++ LV A+ R
Sbjct: 120 TEDKKSAFRFHHISTDEVYGDLHSTDDFFT---ETTPYAPSSPYSASKASSDHLVRAWLR 176
Query: 177 SYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAF 236
+YGLP + T +N YGP FPEKLIP IL A+ GK LP++G+G +R +LY ED A A
Sbjct: 177 TYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARAL 236
Query: 237 DTILHKGEVGHVYNIGTKKERRVIDVATDICKLFS-LNPDTQ---------IKFVENRPF 286
+ G+VG YNIG ER+ +DV IC+L L P+ I FV +RP
Sbjct: 237 YCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPG 296
Query: 287 NDQRYFLDVQKL-KQLGWYERVTWEEGLQKTMKWYISNPDWWGDV 330
+D RY +D K+ ++LGW + T+E G++KT++WY++N WW V
Sbjct: 297 HDLRYAIDASKIARELGWLPQETFESGMRKTVQWYLANESWWKQV 341
>UNIPROTKB|P37759 [details] [associations]
symbol:rfbB "RmlB" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=ISS] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process"
evidence=IEA;ISS] [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=IEA;ISS] [GO:0009243 "O antigen biosynthetic
process" evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
Pfam:PF01370 UniPathway:UPA00124 UniPathway:UPA00281
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009103 OMA:KWWSRVL EMBL:U09876
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
GO:GO:0019305 PIR:H64969 RefSeq:NP_416545.1 RefSeq:YP_490283.1
ProteinModelPortal:P37759 SMR:P37759 DIP:DIP-10680N IntAct:P37759
MINT:MINT-1302103 PRIDE:P37759 EnsemblBacteria:EBESCT00000003521
EnsemblBacteria:EBESCT00000014484 GeneID:12930685 GeneID:945276
KEGG:ecj:Y75_p2004 KEGG:eco:b2041 PATRIC:32119415 EchoBASE:EB2311
EcoGene:EG12412 HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
BioCyc:EcoCyc:DTDPGLUCDEHYDRAT-MONOMER
BioCyc:ECOL316407:JW2026-MONOMER
BioCyc:MetaCyc:DTDPGLUCDEHYDRAT-MONOMER Genevestigator:P37759
PANTHER:PTHR10366:SF41 Uniprot:P37759
Length = 361
Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
Identities = 145/347 (41%), Positives = 201/347 (57%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
IL+TG AGFI S V +I N + +V +DKL Y N ++L S + F D+
Sbjct: 3 ILVTGGAGFIGSAVVRHIINNTQD-SVVNVDKLTYAGNRESLADVSDSERYVFEHADICD 61
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK-----ITGQ 124
A + I + D +MH AA++HVD S F + NI GT+VLLEA + +
Sbjct: 62 APAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDSD 121
Query: 125 IK---RFIHVSTDEVYGETDEDAVVGNHEASQLL-------PTNPYSATKAGAEMLVMAY 174
K RF H+STDEVYG+ V N E L P++PYSA+KA ++ LV A+
Sbjct: 122 KKNSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHLVRAW 181
Query: 175 GRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAE 234
R+YGLP I T +N YGP FPEKLIP IL A++GK LPI+G G +R +LY ED A
Sbjct: 182 KRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHAR 241
Query: 235 AFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFS-LNPDT-----QIKFVENRPFND 288
A T++ +G+ G YNIG E++ IDV IC L + P QI +V +RP +D
Sbjct: 242 ALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGHD 301
Query: 289 QRYFLDVQKL-KQLGWYERVTWEEGLQKTMKWYISNPDWWGDV-SGA 333
+RY +D +K+ + LGW + T+E G++KT++WY+SN W +V SGA
Sbjct: 302 RRYAIDAEKIGRALGWKPQETFESGIRKTVEWYLSNTKWVDNVKSGA 348
>UNIPROTKB|P55294 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122586
"Neisseria meningitidis MC58" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE002098 GenomeReviews:AE002098_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
ProtClustDB:CLSK877380 EMBL:L09188 PIR:G81242 PIR:S42431
RefSeq:NP_273127.1 RefSeq:NP_273142.1 ProteinModelPortal:P55294
SMR:P55294 EnsemblBacteria:EBNEIT00000009034
EnsemblBacteria:EBNEIT00000009474 GeneID:902170 GeneID:902183
KEGG:nme:NMB0063 KEGG:nme:NMB0079 PATRIC:20355131 OMA:ARSWWNT
BioCyc:NMEN122586:GHGG-64-MONOMER BioCyc:NMEN122586:GHGG-80-MONOMER
Uniprot:P55294
Length = 355
Score = 628 (226.1 bits), Expect = 2.1e-61, P = 2.1e-61
Identities = 141/344 (40%), Positives = 200/344 (58%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
+ IL+TG AGFI S V +I N + +V +DKL Y NL++L +P + F + D+
Sbjct: 2 RKILVTGGAGFIGSAVVRHIIRNTRD-AVVNVDKLTYAGNLESLTEVADNPRYAFEQVDI 60
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIK- 126
+ + + D +MH AA++HVD S G++ EF + NI GT LLEA + Q
Sbjct: 61 CDRAELDRVFAQYRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQMP 120
Query: 127 -------RFIHVSTDEVYGETD--EDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS 177
RF H+STDEVYG+ +D E + P++PYSA+KA ++ LV A+ R+
Sbjct: 121 SEQHEAFRFHHISTDEVYGDLGGTDDLFT---ETAPYAPSSPYSASKASSDHLVRAWLRT 177
Query: 178 YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFD 237
YGLP I T +N YGP FPEKLIP IL A+ GKPLP++GDG +R +L+ ED A A
Sbjct: 178 YGLPTIVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALY 237
Query: 238 TILHKGEVGHVYNIGTKKERRVIDVATDICKLFS-LNPDTQ---------IKFVENRPFN 287
++ +G VG YNIG E+ I+V IC L L P+ I FV++RP +
Sbjct: 238 QVVTEGVVGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGH 297
Query: 288 DQRYFLDVQKLKQ-LGWYERVTWEEGLQKTMKWYISNPDWWGDV 330
D RY +D K+++ LGW T+E GL+KT++WY+ N WW +V
Sbjct: 298 DVRYAVDAAKIRRDLGWLPLETFESGLRKTVQWYLDNKTWWQNV 341
>UNIPROTKB|P26391 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:99287
"Salmonella enterica subsp. enterica serovar Typhimurium str. LT2"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=ISS] [GO:0070404 "NADH binding" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
Gene3D:3.40.50.720 EMBL:AE006468 EMBL:X56793
GenomeReviews:AE006468_GR GO:GO:0009103 GO:GO:0070404 GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF PIR:S15299 RefSeq:NP_461042.1
PDB:1G1A PDB:1KEU PDB:1KEW PDBsum:1G1A PDBsum:1KEU PDBsum:1KEW
ProteinModelPortal:P26391 SMR:P26391 PRIDE:P26391 GeneID:1253618
KEGG:stm:STM2097 PATRIC:32382777 EvolutionaryTrace:P26391
Uniprot:P26391
Length = 361
Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
Identities = 142/347 (40%), Positives = 201/347 (57%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
ILITG AGFI S V +I N + +V +DKL Y NL++L+ S + F D+
Sbjct: 3 ILITGGAGFIGSAVVRHIIKNTQD-TVVNIDKLTYAGNLESLSDISESNRYNFEHADICD 61
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK----ITGQI 125
+ + I + D +MH AA++HVD S F + NI GT+ LLE + G+
Sbjct: 62 SAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGED 121
Query: 126 K----RFIHVSTDEVYGETDEDAVVGNH-------EASQLLPTNPYSATKAGAEMLVMAY 174
K RF H+STDEVYG+ V N E + P++PYSA+KA ++ LV A+
Sbjct: 122 KKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAW 181
Query: 175 GRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAE 234
R+YGLP I T +N YGP FPEKLIP IL A++GKPLPI+G G +R +LY ED A
Sbjct: 182 RRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHAR 241
Query: 235 AFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFS-LNPDT-----QIKFVENRPFND 288
A ++ +G+ G YNIG E++ +DV IC L + P QI +V +RP +D
Sbjct: 242 ALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHD 301
Query: 289 QRYFLDVQKL-KQLGWYERVTWEEGLQKTMKWYISNPDWWGDV-SGA 333
+RY +D K+ ++LGW T+E G++KT++WY++N W +V SGA
Sbjct: 302 RRYAIDAGKISRELGWKPLETFESGIRKTVEWYLANTQWVNNVKSGA 348
>TIGR_CMR|CHY_0979 [details] [associations]
symbol:CHY_0979 "dTDP-glucose 4,6-dehydratase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0009225 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:YP_359826.1 ProteinModelPortal:Q3ADF8
SMR:Q3ADF8 STRING:Q3ADF8 GeneID:3726804 KEGG:chy:CHY_0979
PATRIC:21275091 OMA:AEFRPEA ProtClustDB:CLSK2310403
BioCyc:CHYD246194:GJCN-978-MONOMER Uniprot:Q3ADF8
Length = 309
Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
Identities = 130/312 (41%), Positives = 193/312 (61%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
IL+TG AGFI S + Y +++++++DKL Y +L+ + R KF K DVA
Sbjct: 3 ILVTGGAGFIGSAFVRKYA--Y-DHELIIVDKLTYAGDLRRIEEVR--DRIKFYKADVAD 57
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFI 129
+ I EK + ++HFAA++HVD S + F + N+ GT V+L+A + G I++F+
Sbjct: 58 KTAIEEIFDKEKPEAVVHFAAESHVDRSIQDPTPFIETNVKGTQVMLDASRKYG-IEKFV 116
Query: 130 HVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNN 189
H+STDEVYGE ++ E S L P +PYS +KA A+ML AY R+YGLPVI R N
Sbjct: 117 HISTDEVYGELGKEGQFT--EESPLRPNSPYSVSKAAADMLARAYHRTYGLPVIVARPCN 174
Query: 190 VYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGHVY 249
YGP Q+PEKLIP I A+ +P+P++G G NVR +LY +D EA +L KG+ G Y
Sbjct: 175 NYGPWQYPEKLIPVVIKKALNNEPIPVYGQGLNVREWLYVDDCIEAVYLLLQKGKPGEAY 234
Query: 250 NIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ-LGWYERVT 308
NIG+ +E+ I+V +I ++ P++ I FVE+RP +D RY L+ +K+K W +V
Sbjct: 235 NIGSGEEKGNIEVVKEILRILG-KPESLITFVEDRPGHDFRYSLNSKKIKMNYAWKHKVN 293
Query: 309 WEEGLQKTMKWY 320
+ EG++ + WY
Sbjct: 294 FNEGIRFVIDWY 305
>UNIPROTKB|Q9ZAE8 [details] [associations]
symbol:acbB "dTDP-glucose 4,6-dehydratase" species:134676
"Actinoplanes sp. SE50/110" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0045226 GO:GO:0008460 TIGRFAMs:TIGR01181
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:Y18523 EMBL:CP003170
RefSeq:YP_006266644.1 ProteinModelPortal:Q9ZAE8 SMR:Q9ZAE8
GeneID:12821023 KEGG:ase:ACPL_3681 Uniprot:Q9ZAE8
Length = 320
Score = 623 (224.4 bits), Expect = 7.1e-61, P = 7.1e-61
Identities = 130/324 (40%), Positives = 191/324 (58%)
Query: 10 ILITGAAGFIASHVCNRLIGN-----YPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIK 64
IL+TG AGFI SH LI P ++ V+DKL Y NL+NL + P F F++
Sbjct: 3 ILVTGGAGFIGSHFVTSLISGDIATPQPVTQVTVVDKLGYGGNLRNLAEASADPRFSFVR 62
Query: 65 GDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQ 124
GD+ L+ ++ DT+ HFAA+THVD S S F +N+ GT VLL+A +
Sbjct: 63 GDICDEGLIEGLMARH--DTVAHFAAETHVDRSVVASGPFVASNLVGTQVLLDAA-LRHH 119
Query: 125 IKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 184
I RF+HVSTDEVYG D + H L P +PY+A+KAG+++L +AY +++G+ V+
Sbjct: 120 IGRFLHVSTDEVYGSIDTGSWAEGHP---LAPNSPYAASKAGSDLLALAYHQTHGMDVVV 176
Query: 185 TRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE 244
TR +N YGP QFPEK+IP F+ + G +P++GDG N+R +L+ D L G
Sbjct: 177 TRCSNNYGPRQFPEKMIPLFVTRLLDGLDVPVYGDGRNIRDWLHVSDHCRGLALALGAGR 236
Query: 245 VGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLK-QLGW 303
G VY+IG E +++ T+I P ++I FV +R +D+RY LD K+ +LG+
Sbjct: 237 AGEVYHIGGGWEATNLEL-TEILLEACGAPASRISFVTDRKGHDRRYSLDYSKIAGELGY 295
Query: 304 YERVTWEEGLQKTMKWYISNPDWW 327
RV + +G+ +T+ WY +N WW
Sbjct: 296 RPRVDFTDGIAETVAWYRANRSWW 319
>UNIPROTKB|P37761 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:485
"Neisseria gonorrhoeae" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
GO:GO:0019305 PANTHER:PTHR10366:SF41 EMBL:Z32742 EMBL:Z21508
PIR:S47045 ProteinModelPortal:P37761 SMR:P37761 Uniprot:P37761
Length = 346
Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
Identities = 139/337 (41%), Positives = 198/337 (58%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
KNIL+TG AGFI S V +I N + +V LDKL Y NL++L +P + F + D+
Sbjct: 7 KNILVTGGAGFIGSAVVRHIIQNTRD-SVVNLDKLTYAGNLESLTDIADNPRYAFEQVDI 65
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIK- 126
+ + + D +MH AA++HVD + G++ EF + NI GT LLEA + Q
Sbjct: 66 CDRAELDRVFAQYRPDAVMHLAAESHVDRAIGSAGEFIRTNIVGTFDLLEAARAYWQQMP 125
Query: 127 -------RFIHVSTDEVYGETD--EDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS 177
RF H+STDEVYG+ +D E + P++PYSA+KA A+ LV A+ R+
Sbjct: 126 SEKREAFRFHHISTDEVYGDLHGTDDLFT---ETTPYAPSSPYSASKAAADHLVRAWQRT 182
Query: 178 YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFD 237
Y LP I + +N YGP QFPEKLIP IL A+ GKPLP++GDG+ +R +L+ ED A A
Sbjct: 183 YRLPSIVSNCSNNYGPRQFPEKLIPLMILNALSGKPLPVYGDGAQIRDWLFVEDHARALY 242
Query: 238 TILHKGEVGHVYNIGTKKERRVIDVATDICKLFS-LNPDTQ---------IKFVENRPFN 287
++ +G VG YNIG E+ ++V IC L L P+ I FV++RP +
Sbjct: 243 QVVTEGVVGETYNIGGHNEKTNLEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGH 302
Query: 288 DQRYFLDVQKLKQ-LGWYERVTWEEGLQKTMKWYISN 323
D RY +D K+++ LGW T+E GL+KT++WY+ N
Sbjct: 303 DARYAVDAAKIRRDLGWLPLETFESGLRKTVQWYLDN 339
>UNIPROTKB|Q9S642 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122587
"Neisseria meningitidis Z2491" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
OMA:RAYRQQM EMBL:AL157959 GenomeReviews:AL157959_GR GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
EMBL:AF083467 PIR:G82014 RefSeq:YP_002341735.1
RefSeq:YP_002341747.1 ProteinModelPortal:Q9S642 SMR:Q9S642
EnsemblBacteria:EBNEIT00000000158 EnsemblBacteria:EBNEIT00000001121
GeneID:906204 GeneID:906218 KEGG:nma:NMA0189 KEGG:nma:NMA0204
PATRIC:20360960 ProtClustDB:CLSK877380
BioCyc:NMEN122587:GI3Q-220-MONOMER
BioCyc:NMEN122587:GI3Q-233-MONOMER Uniprot:Q9S642
Length = 341
Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
Identities = 139/337 (41%), Positives = 196/337 (58%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
+ IL+TG AGFI S V +I N + +V LDKL Y NL++L +P + F + D+
Sbjct: 2 RKILVTGGAGFIGSAVVRHIIRNTQD-SVVNLDKLTYAGNLESLTDIADNPRYAFEQVDI 60
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIK- 126
+ + + D +MH AA++HVD S G++ EF + NI GT LLEA + Q
Sbjct: 61 CDRAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYRQQMP 120
Query: 127 -------RFIHVSTDEVYGETD--EDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS 177
RF H+STDEVYG+ +D E + P++PYSA+KA ++ LV A+ R+
Sbjct: 121 SEKHEAFRFHHISTDEVYGDLSGTDDLFT---ETAPYAPSSPYSASKASSDHLVRAWLRT 177
Query: 178 YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFD 237
YGLP I T +N YGP FPEKLIP IL A+ GKPLP++GDG +R +L+ ED A A
Sbjct: 178 YGLPTIVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALY 237
Query: 238 TILHKGEVGHVYNIGTKKERRVIDVATDICKLFS-LNPDTQ---------IKFVENRPFN 287
++ +G VG YNIG E+ I+V IC L L P+ I FV++RP +
Sbjct: 238 QVVTEGVVGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGH 297
Query: 288 DQRYFLDVQKLKQ-LGWYERVTWEEGLQKTMKWYISN 323
D RY +D K+++ LGW T+E GL+KT++WY+ N
Sbjct: 298 DARYAVDTAKIRRDLGWQPLETFESGLRKTVQWYLDN 334
>UNIPROTKB|P0C7J0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:190485
"Xanthomonas campestris pv. campestris str. ATCC 33913" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE008922 GenomeReviews:AE008922_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
ProtClustDB:CLSK445958 RefSeq:NP_636013.1 ProteinModelPortal:P0C7J0
SMR:P0C7J0 GeneID:1001158 KEGG:xcc:XCC0621 PATRIC:24071892
Uniprot:P0C7J0
Length = 351
Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
Identities = 138/341 (40%), Positives = 193/341 (56%)
Query: 11 LITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASA 70
L+TG AGFI + + ++V LD L Y NL L + + F+KGD+
Sbjct: 5 LVTGRAGFIGGNFVLEAVSR--GIRVVNLDALTYAGNLNTLASLEGNADHIFVKGDIGDG 62
Query: 71 DLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEAC----KITGQIK 126
LV +L + D +++FAA++HVD S F + N+ GT LLEA K +
Sbjct: 63 ALVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPDTR 122
Query: 127 R----FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 182
R F+HVSTDEVYG E E + P +PYSA+KA ++ LV A+ +YGLPV
Sbjct: 123 RDAFRFLHVSTDEVYGTLGETGKFT--ETTPYAPNSPYSASKAASDHLVRAFHHTYGLPV 180
Query: 183 ITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHK 242
+TT +N YGP FPEKLIP I A+ G+PLP++GDG VR +L+ D EA T+L K
Sbjct: 181 LTTNCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAK 240
Query: 243 GEVGHVYNIGTKKERRVIDVATDICKLFSLN-P-------DTQIKFVENRPFNDQRYFLD 294
G VG YN+G ER+ I+V IC L + P ++QI +V +RP +D+RY +D
Sbjct: 241 GRVGETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGHDRRYAID 300
Query: 295 VQKLK-QLGWYERVTWEEGLQKTMKWYISNPDWWGDVSGAL 334
KLK +LGW T+E+G+ +T+ WY++N W V G L
Sbjct: 301 ASKLKDELGWEPAYTFEQGIAQTVDWYLTNQTW---VQGVL 338
>UNIPROTKB|B0RVL0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:509169
"Xanthomonas campestris pv. campestris str. B100" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AM920689 GenomeReviews:AM920689_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:AF204145
RefSeq:YP_001905139.1 ProteinModelPortal:B0RVL0 SMR:B0RVL0
STRING:B0RVL0 GeneID:6324993 KEGG:xca:xccb100_3734 PATRIC:24087420
OMA:GFIASHM ProtClustDB:CLSK445958 Uniprot:B0RVL0
Length = 351
Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
Identities = 138/341 (40%), Positives = 192/341 (56%)
Query: 11 LITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASA 70
L+TG AGFI + + ++V LD L Y NL L + + F+KGD+
Sbjct: 5 LVTGGAGFIGGNFVLEAVSR--GIRVVNLDALTYAGNLNTLASLEGNADHIFVKGDIGDG 62
Query: 71 DLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEAC----KITGQIK 126
LV +L + D +++FAA++HVD S F + N+ GT LLEA K +
Sbjct: 63 ALVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPDTR 122
Query: 127 R----FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 182
R F+HVSTDEVYG E E + P +PYSA+KA ++ LV A+ +YGLPV
Sbjct: 123 RDAFRFLHVSTDEVYGTLGETGKFT--ETTPYAPNSPYSASKAASDHLVRAFHHTYGLPV 180
Query: 183 ITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHK 242
+TT +N YGP FPEKLIP I A+ G+PLP++GDG VR +L+ D EA T+L K
Sbjct: 181 LTTNCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAK 240
Query: 243 GEVGHVYNIGTKKERRVIDVATDICKLFSLN-P-------DTQIKFVENRPFNDQRYFLD 294
G VG YN+G ER+ I+V IC L + P ++QI +V +RP +D+RY +D
Sbjct: 241 GRVGETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGHDRRYAID 300
Query: 295 VQKLK-QLGWYERVTWEEGLQKTMKWYISNPDWWGDVSGAL 334
KLK +LGW T+E+G+ T+ WY++N W V G L
Sbjct: 301 ASKLKDELGWEPAYTFEQGIALTVDWYLTNQTW---VQGVL 338
>UNIPROTKB|P44914 [details] [associations]
symbol:rffG "dTDP-glucose 4,6-dehydratase" species:71421
"Haemophilus influenzae Rd KW20" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:L42023
GenomeReviews:L42023_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 PIR:C64099 RefSeq:NP_439034.2
ProteinModelPortal:P44914 SMR:P44914 GeneID:949510 KEGG:hin:HI0873
PATRIC:20190401 OMA:AKKAFRF ProtClustDB:CLSK824762 Uniprot:P44914
Length = 338
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 137/336 (40%), Positives = 196/336 (58%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVA 68
NIL+TG +GFI S + +I + ++ ++ +DKL Y +N L +P + F K D+
Sbjct: 3 NILVTGGSGFIGSALIRYIINHTQDF-VINIDKLTYAANQSALREVENNPRYVFEKVDIC 61
Query: 69 SADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK----ITGQ 124
+++ I + D +MH AA++HVD S + +F + NI GT+ LLE K +
Sbjct: 62 DLNVIENIFEKYQPDAVMHLAAESHVDRSISGAADFVQTNIVGTYTLLEVAKNYWHTLDE 121
Query: 125 IK----RFIHVSTDEVYGETD--EDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY 178
K RF H+STDEVYG+ E A E S P++PYSA+KA + LV A+ R+Y
Sbjct: 122 AKKTTFRFHHISTDEVYGDLSLSEPAFT---EQSPYHPSSPYSASKAASNHLVQAWHRTY 178
Query: 179 GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDT 238
GLPVI T +N YG Q EKLIP I A+ GKPLPI+GDG +R +L+ ED +A
Sbjct: 179 GLPVIITNSSNNYGAYQHAEKLIPLMISNAVMGKPLPIYGDGQQIRDWLFVEDHVQASYL 238
Query: 239 ILHKGEVGHVYNIGTKKERRVIDVATDICKLFS-LNPD--TQIK-------FVENRPFND 288
+L KG VG YNIG E+ ++V IC+L L P IK FV++RP +D
Sbjct: 239 VLTKGRVGENYNIGGNCEKTNLEVVKRICQLLEELAPSKPNHIKYYEDLMTFVKDRPGHD 298
Query: 289 QRYFLDVQKLK-QLGWYERVTWEEGLQKTMKWYISN 323
RY LD K+ +LGW ++T+E+GL++T+KWY+ N
Sbjct: 299 VRYSLDCSKIHAELGWQPQITFEQGLRQTVKWYLFN 334
>WB|WBGene00018737 [details] [associations]
symbol:F53B1.4 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225 GO:GO:0040017
GeneTree:ENSGT00530000063128 EMBL:FO081052 GO:GO:0008460
eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:AYNDARY HSSP:P26391 PIR:T16444
RefSeq:NP_508390.1 UniGene:Cel.908 ProteinModelPortal:Q20697
SMR:Q20697 STRING:Q20697 PaxDb:Q20697 EnsemblMetazoa:F53B1.4
GeneID:180525 KEGG:cel:CELE_F53B1.4 UCSC:F53B1.4 CTD:180525
WormBase:F53B1.4 InParanoid:Q20697 NextBio:909738 Uniprot:Q20697
Length = 342
Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
Identities = 125/325 (38%), Positives = 186/325 (57%)
Query: 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDY-CSNLKNLNPSRLSPNFKFIKG 65
P +LITG GFI S+ N + K + DKL + S L R SP +KF++
Sbjct: 8 PTCVLITGGCGFIGSNYINFTFNKWKNTKFINYDKLAFGASPLHVEKEIRESPRYKFVEA 67
Query: 66 DVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQ- 124
+ + L ++D ++HFAA THVD S+ + ++NI T LLE+ +
Sbjct: 68 ALEDQPTLIKTLQENEVDMVIHFAAITHVDESYSDRIGTIQDNIISTTTLLESIVNSPYK 127
Query: 125 -IKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVI 183
+K+ +H+STDEVYG++ ED + AS PTNPY+A+KA EM++ +Y SY LP +
Sbjct: 128 GVKKLVHISTDEVYGDSFEDTTPKSESASLPNPTNPYAASKAACEMVIRSYWHSYKLPYV 187
Query: 184 TTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG 243
R NNVYGP Q KLIPKF LA+ GKP P+ GDG + RS++Y ED +EA + +G
Sbjct: 188 MVRMNNVYGPRQIHTKLIPKFTKLALDGKPYPLMGDGLHTRSWMYVEDCSEAITRVALEG 247
Query: 244 EVGHVYNIGTKKERRVIDVAT----DICKLFSLNPDTQIKF--VENRPFNDQRYFLDVQK 297
+G +YNIGT E I++ + KL + P T F + +RP++D+RY++D K
Sbjct: 248 TLGEIYNIGTDFEMTNIELTKMIHFTVSKLLNREP-TAPTFAPIPDRPYHDRRYYIDFSK 306
Query: 298 LKQ-LGWYERVTWEEGLQKTMKWYI 321
++ +GW + EGL KT+ +Y+
Sbjct: 307 IRNAMGWQCTTPFSEGLMKTIDYYV 331
>CGD|CAL0000450 [details] [associations]
symbol:GAL102 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 121/315 (38%), Positives = 184/315 (58%)
Query: 3 TVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKF 62
TV K I+++G AGFI H ++ YP + +DKL+Y SN + + NF+F
Sbjct: 2 TVSFDKRIVVSGGAGFIGIHFLCYMVKKYPNFHFTCIDKLNYASNATEIENLKSFSNFEF 61
Query: 63 IKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKIT 122
+ D+ S +L + + +T+ I++FAA++ VD SF + FTKNNI T LLE ++
Sbjct: 62 VHLDL-SDNLEYLLKITKNTTDIINFAAESSVDRSFKDPVYFTKNNILATQNLLECHRLN 120
Query: 123 GQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 182
I F+H+STDEVYG+ E N E + + PTNPYSA+KA ++++ +Y SY LP+
Sbjct: 121 PSIGYFLHISTDEVYGDVYEG---DNKENAVMNPTNPYSASKAAIDLIIKSYQYSYKLPI 177
Query: 183 ITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHK 242
R NNVYGP Q+PEK+IP I + KP+P+HG G+N R YLY D+ A +T+ K
Sbjct: 178 TILRPNNVYGPLQYPEKIIPLTIQCINEKKPIPVHGKGTNKRKYLYVLDIVLAIETVWIK 237
Query: 243 GE---VGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLK 299
V +YNIG E + + I ++F +I+F+++R +ND Y +D K+
Sbjct: 238 NPMTTVNQIYNIGGTDELDNLSLIKLIMEIFGRG---EIQFIKDRNYNDTNYSIDTTKIH 294
Query: 300 QLGWYERVTWEEGLQ 314
LGW +++ +GLQ
Sbjct: 295 NLGWSPKISLVQGLQ 309
>UNIPROTKB|Q59VY4 [details] [associations]
symbol:TGD99 "Putative uncharacterized protein TGD99"
species:237561 "Candida albicans SC5314" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0035690
"cellular response to drug" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 121/315 (38%), Positives = 184/315 (58%)
Query: 3 TVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKF 62
TV K I+++G AGFI H ++ YP + +DKL+Y SN + + NF+F
Sbjct: 2 TVSFDKRIVVSGGAGFIGIHFLCYMVKKYPNFHFTCIDKLNYASNATEIENLKSFSNFEF 61
Query: 63 IKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKIT 122
+ D+ S +L + + +T+ I++FAA++ VD SF + FTKNNI T LLE ++
Sbjct: 62 VHLDL-SDNLEYLLKITKNTTDIINFAAESSVDRSFKDPVYFTKNNILATQNLLECHRLN 120
Query: 123 GQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 182
I F+H+STDEVYG+ E N E + + PTNPYSA+KA ++++ +Y SY LP+
Sbjct: 121 PSIGYFLHISTDEVYGDVYEG---DNKENAVMNPTNPYSASKAAIDLIIKSYQYSYKLPI 177
Query: 183 ITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHK 242
R NNVYGP Q+PEK+IP I + KP+P+HG G+N R YLY D+ A +T+ K
Sbjct: 178 TILRPNNVYGPLQYPEKIIPLTIQCINEKKPIPVHGKGTNKRKYLYVLDIVLAIETVWIK 237
Query: 243 GE---VGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLK 299
V +YNIG E + + I ++F +I+F+++R +ND Y +D K+
Sbjct: 238 NPMTTVNQIYNIGGTDELDNLSLIKLIMEIFGRG---EIQFIKDRNYNDTNYSIDTTKIH 294
Query: 300 QLGWYERVTWEEGLQ 314
LGW +++ +GLQ
Sbjct: 295 NLGWSPKISLVQGLQ 309
>TIGR_CMR|SO_3167 [details] [associations]
symbol:SO_3167 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:NP_718723.1 ProteinModelPortal:Q8ECH5
SMR:Q8ECH5 GeneID:1170861 KEGG:son:SO_3167 PATRIC:23526018
OMA:IDLIIHK ProtClustDB:CLSK907039 Uniprot:Q8ECH5
Length = 343
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 126/336 (37%), Positives = 192/336 (57%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
IL+TG AGFI S + LI E ++ DKL Y S+ ++L + + F++ D+
Sbjct: 3 ILVTGGAGFIGSALVRMLI-EQTESVVLNFDKLTYASHPESLAGVADNERYHFVQADICD 61
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK----ITGQI 125
+ +L + D +MH AA++HVD S EF + NI GT+ LLEAC+ GQ
Sbjct: 62 RARLEQVLQQFQPDLMMHLAAESHVDRSIDGPAEFIQTNIVGTYTLLEACRSYYQTLGQA 121
Query: 126 K----RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 181
+ R H+STDEV+G E + E S P++PYSA+KA A+ LV A+ R+Y LP
Sbjct: 122 QQRRFRLHHISTDEVFGSLTETGLFS--ETSAYDPSSPYSASKASADHLVRAWHRTYALP 179
Query: 182 VITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILH 241
++ T +N YGP Q+PEKLIP + A++ KPLPI+G+G VR +LY +D +A +
Sbjct: 180 IVITNCSNNYGPFQYPEKLIPLMVSNALQSKPLPIYGNGQQVRDWLYVDDHVKALYLVAT 239
Query: 242 KGEVGHVYNIGTKKERRVIDVATDICKLFS----LNPDTQ----------IKFVENRPFN 287
+G++G YNIG E+ + V IC L +P + I++V +RP +
Sbjct: 240 QGQLGQTYNIGGSCEQTNLTVVRHICSLLEELVPTHPQSLAMGNAGFADLIQYVVDRPGH 299
Query: 288 DQRYFLDVQKL-KQLGWYERVTWEEGLQKTMKWYIS 322
D RY +D K+ ++LGW + ++E GL+KT++W I+
Sbjct: 300 DVRYAIDASKIQRELGWRPQESFESGLRKTVEWIIN 335
>UNIPROTKB|P29782 [details] [associations]
symbol:strE "dTDP-glucose 4,6-dehydratase" species:1911
"Streptomyces griseus" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0019872 "streptomycin biosynthetic
process" evidence=IGI] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 UniPathway:UPA00066
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0019872 GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 PANTHER:PTHR10366:SF41 EMBL:X62567 PIR:S18617
ProteinModelPortal:P29782 SMR:P29782 Uniprot:P29782
Length = 328
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 119/326 (36%), Positives = 185/326 (56%)
Query: 9 NILITGAAGFIASHVCNRLIG--NYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGD 66
++L+TGAAGFI S L+G P+ + LD L Y N NL R P ++F +GD
Sbjct: 4 HLLVTGAAGFIGSQYVRTLLGPGGPPDVVVTALDALTYAGNPDNLAAVRGHPRYRFERGD 63
Query: 67 VASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIK 126
+ A ++ + D ++H AA++HVD S ++ F + N++GT LL+A G +
Sbjct: 64 ICDAP-GRRVMAGQ--DQVVHLAAESHVDRSLLDASVFVRTNVHGTQTLLDAATRHG-VA 119
Query: 127 RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 186
F+ VSTDEVYG + + E L P +PYSA+KA ++L +A+ S+GL V TR
Sbjct: 120 SFVQVSTDEVYGSLEHGSWT---EDEPLRPNSPYSASKASGDLLALAHHVSHGLDVRVTR 176
Query: 187 GNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVG 246
+N YGP QFPEKLIP+FI L M G +P++GDG NVR +L+ +D + + +G G
Sbjct: 177 CSNNYGPRQFPEKLIPRFITLLMDGHRVPLYGDGLNVREWLHVDDHVRGIEAVRTRGRAG 236
Query: 247 HVYNIG---TKKERRVIDVATDICKLFSLNPDT-QIKFVENRPFNDQRYFLDVQKL-KQL 301
VYNIG T + ++ + + + D +++VE+R +D+RY +D ++ ++L
Sbjct: 237 RVYNIGGGATLSNKELVGLLLE-----AAGADWGSVEYVEDRKGHDRRYAVDSTRIQREL 291
Query: 302 GWYERVTWEEGLQKTMKWYISNPDWW 327
G+ V +GL T+ WY + WW
Sbjct: 292 GFAPAVDLADGLAATVAWYHKHRSWW 317
>UNIPROTKB|P95780 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:210007
"Streptococcus mutans UA159" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103 EMBL:AE014133
GenomeReviews:AE014133_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305 KO:K01710
PANTHER:PTHR10366:SF41 EMBL:D78182 RefSeq:NP_721810.1 PDB:1KEP
PDB:1KET PDBsum:1KEP PDBsum:1KET ProteinModelPortal:P95780
SMR:P95780 EnsemblBacteria:EBSTRT00000013418 GeneID:1028708
KEGG:smu:SMU_1457 PATRIC:19664935 OMA:HEDWWKA
ProtClustDB:CLSK877134 EvolutionaryTrace:P95780 Uniprot:P95780
Length = 348
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 127/332 (38%), Positives = 189/332 (56%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
KNI++TG AGFI S+ + + N+P+ + VLDKL Y N NL L + + GD+
Sbjct: 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANLEEI-LGDRVELVVGDI 63
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
A ++LV L K D I+H+AA++H DNS + F N GT++LLEA + I R
Sbjct: 64 ADSELVD--KLAAKADAIVHYAAESHNDNSLKDPSPFIYTNFVGTYILLEAAR-KYDI-R 119
Query: 128 FIHVSTDEVYGETD-EDAVVGNHEA--------SQLLPTNPYSATKAGAEMLVMAYGRSY 178
F HVSTDEVYG+ + + G+ E ++ P++PYS+TKA ++++V A+ RS+
Sbjct: 120 FHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDLIVKAWVRSF 179
Query: 179 GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKG-KPLPIHGDGSNVRSYLYCEDVAEAFD 237
G+ + +N YGP Q EK IP+ I + G KP ++G+G NVR +++ D +
Sbjct: 180 GVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKP-KLYGEGKNVRDWIHTNDHSTGVW 238
Query: 238 TILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQK 297
IL KG +G Y IG E+ +V I + S P V +R +D RY +D K
Sbjct: 239 AILTKGRIGETYLIGADGEKNNKEVLELILEKMS-QPKNAYDHVTDRAGHDLRYAIDSTK 297
Query: 298 LKQ-LGWYERVT-WEEGLQKTMKWYISNPDWW 327
L++ LGW + T +EEGL+ T+KWY + DWW
Sbjct: 298 LREELGWKPQFTNFEEGLEDTIKWYTEHEDWW 329
>UNIPROTKB|O06329 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IGI;IDA] [GO:0019305 "dTDP-rhamnose biosynthetic process"
evidence=IDA] [GO:0040007 "growth" evidence=IDA;IMP] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IGI]
[GO:0070404 "NADH binding" evidence=ISS] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 UniPathway:UPA00124
InterPro:IPR016040 GO:GO:0040007 GO:GO:0005618 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
Gene3D:3.40.50.720 EMBL:BX842583 GO:GO:0070404 GO:GO:0045226
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:AYNDARY
PIR:E70566 RefSeq:NP_217981.1 RefSeq:NP_338096.1
RefSeq:YP_006516953.1 HSSP:P95780 ProteinModelPortal:O06329
SMR:O06329 PRIDE:O06329 EnsemblBacteria:EBMYCT00000003518
EnsemblBacteria:EBMYCT00000071206 GeneID:13317071 GeneID:887332
GeneID:926625 KEGG:mtc:MT3570 KEGG:mtu:Rv3464 KEGG:mtv:RVBD_3464
PATRIC:18129579 TubercuList:Rv3464 ProtClustDB:CLSK792508
Uniprot:O06329
Length = 331
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 119/326 (36%), Positives = 185/326 (56%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
+L+TG AGFI ++ + + +P+ + VLD L Y ++L + + + ++GD+
Sbjct: 3 LLVTGGAGFIGTNFVHSAVREHPDDAVTVLDALTYAGRRESL--ADVEDAIRLVQGDITD 60
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFI 129
A+LV L+ E D ++HFAA++HVDN+ N F N+ GT +LEA + G R
Sbjct: 61 AELVSQ-LVAES-DAVVHFAAESHVDNALDNPEPFLHTNVIGTFTILEAVRRHGV--RLH 116
Query: 130 HVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNN 189
H+STDEVYG+ + D E++ P++PYSATKAGA+MLV A+ RSYG+ + +N
Sbjct: 117 HISTDEVYGDLELDDRARFTESTPYNPSSPYSATKAGADMLVRAWVRSYGVRATISNCSN 176
Query: 190 VYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGHVY 249
YGP Q EK IP+ I + G+ ++G G+NVR +++ +D A IL +G +G Y
Sbjct: 177 NYGPYQHVEKFIPRQITNVLTGRRPKLYGAGANVRDWIHVDDHNSAVRRILDRGRIGRTY 236
Query: 250 NIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKL-KQLGWYERVT 308
I ++ ER + V + +L +PD V +R +D RY +D L +L W + T
Sbjct: 237 LISSEGERDNLTVLRTLLRLMDRDPD-DFDHVTDRVGHDLRYAIDPSTLYDELCWAPKHT 295
Query: 309 -WEEGLQKTMKWYISNPDWWGDVSGA 333
+EEGL+ T+ WY N WW + A
Sbjct: 296 DFEEGLRTTIDWYRDNESWWRPLKDA 321
>UNIPROTKB|A0QSK6 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:246196
"Mycobacterium smegmatis str. MC2 155" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IGI] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=IGI]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000480 EMBL:CP001663
GenomeReviews:CP000480_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:YP_006566244.1 RefSeq:YP_885894.1 ProteinModelPortal:A0QSK6
SMR:A0QSK6 STRING:A0QSK6 EnsemblBacteria:EBMYCT00000041385
GeneID:13429291 GeneID:4531259 KEGG:msg:MSMEI_1476
KEGG:msm:MSMEG_1512 PATRIC:18075481 OMA:AYNDARY
BioCyc:MSME246196:GJ4Y-1512-MONOMER Uniprot:A0QSK6
Length = 331
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 119/320 (37%), Positives = 181/320 (56%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
+L+TG AGFI ++ + + I VLD L Y + ++L P ++ + ++GD+
Sbjct: 3 LLVTGGAGFIGANFVHLALREARTSSITVLDALTYAGSRESLAP--VADRIRLVQGDITD 60
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFI 129
A LV L+ E D ++HFAA+THVDN+ + F +N+ GT+ +LEA + R
Sbjct: 61 AALVGD-LVAES-DAVVHFAAETHVDNALADPEPFLHSNVVGTYTILEA--VRRHNVRLH 116
Query: 130 HVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNN 189
HVSTDEVYG+ + D +E + P++PYS+TKA A++LV A+ RSYG+ + +N
Sbjct: 117 HVSTDEVYGDLELDNPARFNETTPYNPSSPYSSTKAAADLLVRAWVRSYGVRATISNCSN 176
Query: 190 VYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGHVY 249
YGP Q EK IP+ I + G+ ++G G+NVR +++ +D A IL G +G Y
Sbjct: 177 NYGPYQHVEKFIPRQITNVLTGRRPKLYGAGANVRDWIHVDDHNSAVWRILTDGTIGRTY 236
Query: 250 NIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLK-QLGWYERVT 308
IG + ER + V I KL +PD V +R +D RY +D L+ +LGW + T
Sbjct: 237 LIGAECERNNLTVMRTILKLMGRDPD-DFDHVTDRAGHDLRYAIDPSTLQDELGWAPKHT 295
Query: 309 -WEEGLQKTMKWYISNPDWW 327
+E GL T+ WY +N WW
Sbjct: 296 DFEAGLTDTIDWYRANESWW 315
>DICTYBASE|DDB_G0274991 [details] [associations]
symbol:DDB_G0274991 "NAD-dependent
epimerase/dehydratase family protein" species:44689 "Dictyostelium
discoideum" [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:AAFI02000012 RefSeq:XP_644280.1 STRING:Q554P3
EnsemblProtists:DDB0217586 GeneID:8619708 KEGG:ddi:DDB_G0274991
eggNOG:NOG238479 InParanoid:Q554P3 OMA:ILKCGRS
ProtClustDB:CLSZ2431047 Uniprot:Q554P3
Length = 172
Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 94/171 (54%), Positives = 130/171 (76%)
Query: 499 TGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYD-NVCTLRVRMPISSDLNNPRNFITKIS 557
+GIGFKEE++ N+ S YS TK MVE+L K Y+ N TLR+RMPIS +LN PRNFITKI
Sbjct: 3 SGIGFKEEEEFNYFESHYSVTKQMVEKLTKHYESNTLTLRLRMPISENLNEPRNFITKII 62
Query: 558 RYNKVVNIPNSMTILDELLPISVEMAKRNLSGIWNFTNPGVVSHNEILEMYKAYIDPGFK 617
Y +VVNIPNS T+L +LLPI+++M+ + + G++NF NPGV+SHNEIL++Y I+P FK
Sbjct: 63 NYERVVNIPNSCTVLPDLLPIAIDMSIKQIKGVYNFVNPGVISHNEILDLYTLLINPNFK 122
Query: 618 WTNFTLEEQAKVIVAPRSNNELDASKLKKEFPELLSIKESLIKNVFEPNKK 668
+ NFT EQ+K++ RSNN LD +KL+ +P + +IK+S I+N+F +KK
Sbjct: 123 YQNFTEIEQSKILKCGRSNNHLDTTKLESLYPTIPNIKKS-IENIFLNSKK 172
>POMBASE|SPBPB2B2.11 [details] [associations]
symbol:SPBPB2B2.11 "nucleotide-sugar 4,6-dehydratase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006012 "galactose metabolic process" evidence=IEP] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0031506 "cell wall
glycoprotein biosynthetic process" evidence=NAS] [GO:0033554
"cellular response to stress" evidence=IEP] [GO:0042125 "protein
galactosylation" evidence=NAS] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
InterPro:IPR020904 Pfam:PF01370 InterPro:IPR016040
PomBase:SPBPB2B2.11 GO:GO:0005829 GO:GO:0005634 GO:GO:0033554
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
EMBL:CU329671 GO:GO:0016491 GO:GO:0055114 GO:GO:0006012
GO:GO:0042125 GO:GO:0031506 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:NP_596857.1 HSSP:P26391 ProteinModelPortal:Q9HDU4
STRING:Q9HDU4 EnsemblFungi:SPBPB2B2.11.1 GeneID:2541398
KEGG:spo:SPBPB2B2.11 OMA:IQYVKDR OrthoDB:EOG4VX5DN NextBio:20802505
Uniprot:Q9HDU4
Length = 365
Score = 433 (157.5 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 111/282 (39%), Positives = 161/282 (57%)
Query: 11 LITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRL--SPNFKFIKGDVA 68
LITG AGFI S+ + + YP++ +DKL Y SN + S++ PNF+F++ D+A
Sbjct: 13 LITGGAGFIGSNFLDYAVDKYPDFHFTCIDKLSYVSNYTTVFLSKVLNQPNFRFLEMDLA 72
Query: 69 S--ADLVHFILLTEKIDTIMH---FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKIT- 122
+ L F++ +I+ I H FAA++ VD SF + FTKNNI T LLE +I
Sbjct: 73 TNYKFLYQFMVEDSEINKITHIINFAAESSVDRSFIDPLYFTKNNILSTQNLLECVRILL 132
Query: 123 GQIKR------FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGR 176
G+ + F+HVSTDEVYGE DE+A V E S+L PT+PY+A+KA ++++ +Y
Sbjct: 133 GKKEELRNRLNFVHVSTDEVYGEQDENASVD--EKSKLNPTSPYAASKAAVDLIIQSYRY 190
Query: 177 SYGLPVITTRGNNVYGPNQFPEKLIP-------KFI----LLAMKGKPLPIHGDGSNVRS 225
SY + V R NNVYGP Q+ EKLIP KFI M+ K + +HGDG + R
Sbjct: 191 SYKISVTVIRANNVYGPRQYEEKLIPMTLGKLKKFINQKSQKIMQDK-ITLHGDGLHKRK 249
Query: 226 YLYCEDVAEAFDTILHK--GEVGHVYNIGTKKERRVIDVATD 265
YL+ D A D + K EV H + +K ++ ++ +D
Sbjct: 250 YLHIYDFINAIDLVWMKQGSEVYHS-TLESKMSGQIFNIGSD 290
Score = 137 (53.3 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 51/161 (31%), Positives = 77/161 (47%)
Query: 174 YG-RSYGLPVIT-TRGNNVYGPNQFPEKLIPKFILLAMKG----KPLPIHGDGSNVRSYL 227
YG R Y +I T G NQ +K++ I L G K L I+ D N +
Sbjct: 205 YGPRQYEEKLIPMTLGKLKKFINQKSQKIMQDKITLHGDGLHKRKYLHIY-DFINAIDLV 263
Query: 228 YCEDVAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLF-----SL-NPDTQ--IK 279
+ + +E + + L G ++NIG+ E + + IC F SL N D I
Sbjct: 264 WMKQGSEVYHSTLESKMSGQIFNIGSDDEIDNLSLVKFICDYFLYRKLSLKNLDYSKYIT 323
Query: 280 FVENRPFNDQRYFLDVQKLKQLGWYERVTWEEGLQKTMKWY 320
FV++R +ND RY L+ +K+K LGW ++ E GL+K + Y
Sbjct: 324 FVQDRNYNDSRYSLNYEKIKSLGWRPQIPLETGLRKLIDEY 364
>TIGR_CMR|CJE_1513 [details] [associations]
symbol:CJE_1513 "NAD-dependent epimerase/dehydratase
family protein" species:195099 "Campylobacter jejuni RM1221"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 EMBL:CP000025 GenomeReviews:CP000025_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
RefSeq:YP_179498.1 ProteinModelPortal:Q5HT87 STRING:Q5HT87
GeneID:3232144 KEGG:cjr:CJE1513 PATRIC:20044818 OMA:EVFRLCC
ProtClustDB:CLSK864552 BioCyc:CJEJ195099:GJC0-1541-MONOMER
Uniprot:Q5HT87
Length = 323
Score = 383 (139.9 bits), Expect = 9.0e-35, P = 9.0e-35
Identities = 105/324 (32%), Positives = 164/324 (50%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
KNIL+TGA GFI SH+C L+ +K+ L + + + +L S + + + GD+
Sbjct: 2 KNILVTGADGFIGSHLCESLVKK--GFKVRALSQYNSFNFWGHLEKSPFLKDMEVVSGDL 59
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
+ I T+ ID I H A + S+ + N+ GT +LEA K +I
Sbjct: 60 RDSFFCEKI--TKNIDAIFHLGALIAIPYSYTAPQSYVDTNVNGTLNMLEAAK-KNEISH 116
Query: 128 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 187
FIH ST EVYG V E L P +PYSA+K A+M+ ++Y S+ L V R
Sbjct: 117 FIHTSTSEVYGTA---FYVPIDEKHPLQPQSPYSASKIAADMMALSYYNSFNLNVNIARP 173
Query: 188 NNVYGPNQFPEKLIPKFILLAMKG-KPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVG 246
N YGP Q +IP I + G K + + GD S R + D E F ++L+ G
Sbjct: 174 FNTYGPRQSARAIIPTIITQILSGAKEIKL-GDLSPKRDLNFVLDTCEGFISLLNLKHFG 232
Query: 247 HVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVEN----RPFNDQRYFL--DVQKLKQ 300
VYNIG+ E + +V I K+ D+++K +++ RP N + + L D KLK+
Sbjct: 233 EVYNIGSGVEYSMQEVLNLIQKIL----DSKVKIIQDEQRLRPKNSEVFRLCCDANKLKK 288
Query: 301 L-GWYERVTWEEGLQKTMKWYISN 323
W +++ EEGL+++++++ N
Sbjct: 289 ATNWQSKISLEEGLRQSIEYFKEN 312
>TIGR_CMR|BA_0507 [details] [associations]
symbol:BA_0507 "NAD-dependent epimerase/dehydratase family
protein" species:198094 "Bacillus anthracis str. Ames" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000168004 HSSP:P32054 RefSeq:NP_843043.1
RefSeq:YP_017126.1 RefSeq:YP_026759.1 ProteinModelPortal:Q81YX3
DNASU:1087740 EnsemblBacteria:EBBACT00000010883
EnsemblBacteria:EBBACT00000018378 EnsemblBacteria:EBBACT00000021242
GeneID:1087740 GeneID:2816749 GeneID:2850006 KEGG:ban:BA_0507
KEGG:bar:GBAA_0507 KEGG:bat:BAS0479 OMA:IRWSYAV
ProtClustDB:CLSK915839 BioCyc:BANT260799:GJAJ-522-MONOMER
BioCyc:BANT261594:GJ7F-544-MONOMER Uniprot:Q81YX3
Length = 321
Score = 345 (126.5 bits), Expect = 1.3e-30, P = 1.3e-30
Identities = 104/324 (32%), Positives = 161/324 (49%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
K LITG AGFI SH+ L+G Y + ++D Y KN L + I V
Sbjct: 3 KKCLITGGAGFIGSHLAEELVGR--GYNVTIVDNF-YKG--KNKYHDELMKEIRVIPISV 57
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
+ ++ L + D + H AA V + S E + N GT +L+A + G+ K+
Sbjct: 58 LDKNSIYE--LVNQHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQAA-LKGK-KK 113
Query: 128 FIHVSTDEVYGETDED-AVVGN--HEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 184
+ ST EVYG+ + G+ + A+ + + Y+ K E L + Y GLPV
Sbjct: 114 VVFASTSEVYGKAKPPFSEEGDRLYGATSKIRWS-YAICKTLEETLCLGYALE-GLPVTI 171
Query: 185 TRGNNVYGPN--QFPEK-LIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILH 241
R N+YGP P +IP+FI A++G+ + ++GDG R + Y D EA +
Sbjct: 172 VRYFNIYGPRAKDGPYAGVIPRFISAALQGEDILVYGDGEQTRCFTYVSDAVEATIRAMD 231
Query: 242 KGEVGHVYNIGTKKERRVIDVATDICKLF-SLNPDTQIKFVENRP--FND-QRYFLDVQK 297
+ G + NIG++ E+ + +VA I KL S + Q+ F E P F + DV K
Sbjct: 232 EKVNGEIINIGSENEKSIKEVAEVIKKLTDSSSKIVQVPFEEVYPHGFEEIPNRRPDVTK 291
Query: 298 LKQLGWYE-RVTWEEGLQKTMKWY 320
LK L ++ +VTWE+GL++T+KW+
Sbjct: 292 LKDLVQFQAKVTWEDGLKETIKWF 315
>TIGR_CMR|CBU_0829 [details] [associations]
symbol:CBU_0829 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000167994 RefSeq:NP_819849.2 ProteinModelPortal:Q83DA9
PRIDE:Q83DA9 GeneID:1208722 KEGG:cbu:CBU_0829 PATRIC:17930355
OMA:ANICAMK ProtClustDB:CLSK914342
BioCyc:CBUR227377:GJ7S-824-MONOMER Uniprot:Q83DA9
Length = 331
Score = 328 (120.5 bits), Expect = 8.9e-29, P = 8.9e-29
Identities = 93/318 (29%), Positives = 148/318 (46%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKF--IKG 65
K ++ G AG I SH +RL+ ++++ D +NL + P K I G
Sbjct: 7 KKFVVIGGAGLIGSHTVDRLLQE-DVAEVIIYDNF-VRGTRENLAQALRDPRTKIYDIGG 64
Query: 66 DVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQI 125
D+ D+++ L + +D + HFAA + + + NI GT +LE C G +
Sbjct: 65 DINQTDILNTAL--KGVDGVFHFAALWLLQ-CYEYPRSAFQTNIQGTFNVLETCVAQG-V 120
Query: 126 KRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 185
KR + S+ VYG+ E+ + EA Y ATK E + AY YGLP +
Sbjct: 121 KRLVFSSSASVYGDALEEPMT---EAHPFNSRTFYGATKIAGEAMATAYHHRYGLPFVGL 177
Query: 186 RGNNVYGPNQFPE----KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILH 241
R NVYGP Q +I K + KG+P+ ++GDGS ++Y ED A A +
Sbjct: 178 RYMNVYGPRQDYRGAYIAVIMKMLDALDKGQPMTLYGDGSQAYDFVYVEDCAAANICAMK 237
Query: 242 KGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQL 301
V YN+GT K ++++A +I K+ + + Q + F R + +Q+
Sbjct: 238 ADTVDEYYNVGTGKRTSILELAKEIQKITGTSDNIQF-LPQGTTFVKNRIGCPKKAAEQI 296
Query: 302 GWYERVTWEEGLQKTMKW 319
G+ V EGLQ+ ++W
Sbjct: 297 GFKAEVGLTEGLQRLIEW 314
>UNIPROTKB|Q6MWV3 [details] [associations]
symbol:galE1 "UDP-glucose 4-epimerase" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00214 InterPro:IPR016040 GO:GO:0005886
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842583 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 KO:K01784 PIR:C70562 RefSeq:NP_215015.2
RefSeq:NP_338283.1 RefSeq:YP_006517123.1 HSSP:P09147
ProteinModelPortal:Q6MWV3 SMR:Q6MWV3 PRIDE:Q6MWV3
EnsemblBacteria:EBMYCT00000000637 EnsemblBacteria:EBMYCT00000072644
GeneID:13317242 GeneID:885765 GeneID:926502 KEGG:mtu:Rv3634c
KEGG:mtv:RVBD_3634c PATRIC:18129967 PATRIC:18156681
TubercuList:Rv3634c HOGENOM:HOG000167994 OMA:HSVADPQ
ProtClustDB:CLSK881159 BioCyc:MetaCyc:MONOMER-15254 Uniprot:Q6MWV3
Length = 314
Score = 322 (118.4 bits), Expect = 4.0e-28, P = 4.0e-28
Identities = 95/317 (29%), Positives = 159/317 (50%)
Query: 11 LITGAAGFIASHVCNRLIGNYPEYKIVVLDKL--DYCSNLKNLNPSRLSPNFKFIKGDVA 68
L+TGAAGFI S + +RL+ + + +V LD +NL++L + S + F++ D+
Sbjct: 4 LVTGAAGFIGSTLVDRLLAD--GHSVVGLDNFATGRATNLEHLADN--SAHV-FVEADIV 58
Query: 69 SADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRF 128
+ADL H IL + + + H AAQ V S + N+ GT L EA + TG +++
Sbjct: 59 TADL-HAILEQHRPEVVFHLAAQIDVRRSVADPQFDAAVNVIGTVRLAEAARQTG-VRKI 116
Query: 129 IHVSTD-EVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 187
+H S+ +YG E E + P +PY+A K E+ + + YGL
Sbjct: 117 VHTSSGGSIYGTPPE---YPTPETAPTDPASPYAAGKVAGEIYLNTFRHLYGLDCSHIAP 173
Query: 188 NNVYGPNQFPEK---LIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE 244
NVYGP Q P ++ F + GKP + GDG+N R Y++ +DV +AF +
Sbjct: 174 ANVYGPRQDPHGEAGVVAIFAQALLSGKPTRVFGDGTNTRDYVFVDDVVDAFVRVSADVG 233
Query: 245 VGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ-LGW 303
G +NIGT KE + + + PD +F R + +R LD+ ++ LGW
Sbjct: 234 GGLRFNIGTGKETSDRQLHSAVAAAVG-GPDDP-EFHPPRLGDLKRSCLDIGLAERVLGW 291
Query: 304 YERVTWEEGLQKTMKWY 320
++ +G+++T++++
Sbjct: 292 RPQIELADGVRRTVEYF 308
>TAIR|locus:2053275 [details] [associations]
symbol:UXS6 "UDP-XYL synthase 6" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005886 GO:GO:0003824 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AC005727 HSSP:P27830 HOGENOM:HOG000168004 OMA:LGHENFE
ProtClustDB:CLSN2683686 EMBL:AY099703 EMBL:AY128899 IPI:IPI00536112
PIR:F84688 RefSeq:NP_001077972.1 RefSeq:NP_180443.1
RefSeq:NP_973555.1 UniGene:At.38572 ProteinModelPortal:Q9ZV36
SMR:Q9ZV36 STRING:Q9ZV36 PRIDE:Q9ZV36 EnsemblPlants:AT2G28760.1
EnsemblPlants:AT2G28760.2 EnsemblPlants:AT2G28760.3 GeneID:817426
KEGG:ath:AT2G28760 TAIR:At2g28760 InParanoid:Q9ZV36
PhylomeDB:Q9ZV36 ArrayExpress:Q9ZV36 Genevestigator:Q9ZV36
Uniprot:Q9ZV36
Length = 343
Score = 312 (114.9 bits), Expect = 4.9e-27, P = 4.9e-27
Identities = 94/311 (30%), Positives = 150/311 (48%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
IL+TG AGFI SH+ ++L+ N + +++V D + + NL P F+ I+ DV
Sbjct: 33 ILVTGGAGFIGSHLVDKLMQN-EKNEVIVADNY-FTGSKDNLKKWIGHPRFELIRHDVTE 90
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFI 129
L E +D I H A N + K N+ GT +L K G R +
Sbjct: 91 P------LFVE-VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RIL 141
Query: 130 HVSTDEVYGET----DEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 185
ST EVYG+ ++ GN + + + Y K AE L+ Y R +G+ +
Sbjct: 142 LTSTSEVYGDPLVHPQTESYWGN--VNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 199
Query: 186 RGNNVYGP--NQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG 243
R N YGP N +++ FI A++G+ L + G+ RS+ Y D+ E ++
Sbjct: 200 RIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQKPGTQTRSFCYVSDMVEGLMRLMEGD 259
Query: 244 EVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ-LG 302
+ G + NIG E ++++A + +L + PD +IK VEN P + ++ D+ K K+ LG
Sbjct: 260 QTGPI-NIGNPGEFTMVELAETVKEL--IKPDVEIKMVENTPDDPRQRKPDISKAKEVLG 316
Query: 303 WYERVTWEEGL 313
W +V EGL
Sbjct: 317 WEPKVKLREGL 327
>TAIR|locus:2168539 [details] [associations]
symbol:UXS3 "UDP-glucuronic acid decarboxylase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA;TAS] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;IDA] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002688 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
GO:GO:0048040 IPI:IPI00846930 RefSeq:NP_001078768.1
UniGene:At.24136 ProteinModelPortal:F4KHU8 SMR:F4KHU8 PRIDE:F4KHU8
EnsemblPlants:AT5G59290.2 GeneID:836047 KEGG:ath:AT5G59290
OMA:EINMVEN ArrayExpress:F4KHU8 Uniprot:F4KHU8
Length = 357
Score = 312 (114.9 bits), Expect = 4.9e-27, P = 4.9e-27
Identities = 95/311 (30%), Positives = 152/311 (48%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
ILI+G AGFI SH+ ++L+ N + ++VV D + + +NL P F+ I+ DV
Sbjct: 47 ILISGGAGFIGSHLVDKLMEN-EKNEVVVADNY-FTGSKENLKKWIGHPRFELIRHDVTE 104
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFI 129
LL E +D I H A N + K N+ GT +L K G R +
Sbjct: 105 P------LLIE-VDRIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RIL 155
Query: 130 HVSTDEVYGET----DEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 185
ST EVYG+ ++ GN + + + Y K AE L+ Y R +G+ +
Sbjct: 156 LTSTSEVYGDPLIHPQPESYWGN--VNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 213
Query: 186 RGNNVYGP--NQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG 243
R N YGP N +++ FI A++G+ L + G+ RS+ Y D+ + ++
Sbjct: 214 RIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQKPGTQTRSFCYVSDMVDGLIRLMEGN 273
Query: 244 EVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ-LG 302
+ G + NIG E ++++A + +L +NP +IK VEN P + ++ D+ K K+ LG
Sbjct: 274 DTGPI-NIGNPGEFTMVELAETVKEL--INPSIEIKMVENTPDDPRQRKPDISKAKEVLG 330
Query: 303 WYERVTWEEGL 313
W +V EGL
Sbjct: 331 WEPKVKLREGL 341
>UNIPROTKB|F1SU22 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0048040 "UDP-glucuronate
decarboxylase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:CU929826 Ensembl:ENSSSCT00000008920 Uniprot:F1SU22
Length = 397
Score = 307 (113.1 bits), Expect = 1.7e-26, P = 1.7e-26
Identities = 93/338 (27%), Positives = 157/338 (46%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
K ILITG AGF+ SH+ ++L+ + +++ V+D + +N+ NF+ I DV
Sbjct: 66 KRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNF-FTGRKRNVEHWIGHENFELINHDV 122
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
L E +D I H A+ N N + K N GT +L K G R
Sbjct: 123 VEP------LYIE-VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--R 173
Query: 128 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNP---YSATKAGAEMLVMAYGRSYGLPVIT 184
+ ST EVYG+ + ++ + P P Y K AE + AY + G+ V
Sbjct: 174 LLLASTSEVYGDPEVHPQTEDYWG-HVNPVGPRACYDEGKRVAETMCYAYMKQEGVEVRV 232
Query: 185 TRGNNVYGPNQFPE--KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHK 242
R N +GP +++ FIL A++G+PL ++G GS R++ Y D+ +++
Sbjct: 233 ARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNS 292
Query: 243 GEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLK-QL 301
V N+G +E +++ A I L + ++I+F+ + Q+ D++K K L
Sbjct: 293 N-VSSPVNLGNPEEHTILEFAQLIKNL--VGSGSEIQFLSEAQDDPQKRKPDIKKAKLML 349
Query: 302 GWYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHPR 339
GW V EEGL K + ++ ++ + +P P+
Sbjct: 350 GWEPVVPLEEGLNKAIHYFRKELEY--QANNQYIPKPK 385
>TAIR|locus:2078206 [details] [associations]
symbol:UXS5 "UDP-XYL synthase 5" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;TAS] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009744 "response to sucrose stimulus" evidence=RCA]
[GO:0009749 "response to glucose stimulus" evidence=RCA]
[GO:0009750 "response to fructose stimulus" evidence=RCA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005829
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
EMBL:AL133298 HSSP:P27830 HOGENOM:HOG000168004 EMBL:AY072098
EMBL:AY096586 EMBL:AY087118 EMBL:AK228600 EMBL:AK317497
IPI:IPI00534151 PIR:T45701 RefSeq:NP_001030820.1 RefSeq:NP_190228.1
UniGene:At.43598 ProteinModelPortal:Q9SN95 SMR:Q9SN95 STRING:Q9SN95
PRIDE:Q9SN95 EnsemblPlants:AT3G46440.1 EnsemblPlants:AT3G46440.2
GeneID:823794 KEGG:ath:AT3G46440 TAIR:At3g46440 InParanoid:Q9SN95
OMA:QISTQNR PhylomeDB:Q9SN95 ProtClustDB:CLSN2683686
ArrayExpress:Q9SN95 Genevestigator:Q9SN95 Uniprot:Q9SN95
Length = 341
Score = 307 (113.1 bits), Expect = 1.7e-26, P = 1.7e-26
Identities = 94/311 (30%), Positives = 151/311 (48%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
ILI+G AGFI SH+ ++L+ N + +++V D + + NL P F+ I+ DV
Sbjct: 31 ILISGGAGFIGSHLVDKLMEN-EKNEVIVADNY-FTGSKDNLKKWIGHPRFELIRHDVTE 88
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFI 129
LL E +D I H A N + K N+ GT +L K G R +
Sbjct: 89 P------LLIE-VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RIL 139
Query: 130 HVSTDEVYGET----DEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 185
ST EVYG+ ++ GN + + + Y K AE L+ Y R +G+ +
Sbjct: 140 LTSTSEVYGDPLIHPQPESYWGN--VNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 197
Query: 186 RGNNVYGP--NQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG 243
R N YGP N +++ FI A++G+ L + G+ RS+ Y D+ + ++
Sbjct: 198 RIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQKPGTQTRSFCYVSDMVDGLMRLMEGD 257
Query: 244 EVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ-LG 302
+ G + NIG E ++++A + +L +NP +IK VEN P + ++ D+ K K+ LG
Sbjct: 258 DTGPI-NIGNPGEFTMVELAETVKEL--INPSIEIKMVENTPDDPRQRKPDITKAKEVLG 314
Query: 303 WYERVTWEEGL 313
W +V EGL
Sbjct: 315 WEPKVKLREGL 325
>UNIPROTKB|B3KV61 [details] [associations]
symbol:UXS1 "UDP-glucuronate decarboxylase 1, isoform
CRA_a" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CH471127 GO:GO:0044237 EMBL:AC018878 HOVERGEN:HBG094144
GO:GO:0048040 IPI:IPI00658111 UniGene:Hs.469561 HGNC:HGNC:17729
EMBL:AK122696 SMR:B3KV61 STRING:B3KV61 Ensembl:ENST00000540130
Uniprot:B3KV61
Length = 363
Score = 306 (112.8 bits), Expect = 2.2e-26, P = 2.2e-26
Identities = 92/337 (27%), Positives = 157/337 (46%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
K ILITG AGF+ SH+ ++L+ + +++ V+D + +N+ NF+ I DV
Sbjct: 32 KRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNF-FTGRKRNVEHWIGHENFELINHDV 88
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
L E +D I H A+ N N + K N GT +L K G R
Sbjct: 89 VEP------LYIE-VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--R 139
Query: 128 FIHVSTDEVYGETDEDAVVGNH--EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 185
+ ST EVYG+ + ++ + + P Y K AE + AY + G+ V
Sbjct: 140 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 199
Query: 186 RGNNVYGPNQFPE--KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG 243
R N +GP +++ FIL A++G+PL ++G GS R++ Y D+ +++
Sbjct: 200 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 259
Query: 244 EVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLK-QLG 302
V N+G +E +++ A I L + ++I+F+ + Q+ D++K K LG
Sbjct: 260 -VSSPVNLGNPEEHTILEFAQLIKNL--VGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLG 316
Query: 303 WYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHPR 339
W V EEGL K + ++ ++ + +P P+
Sbjct: 317 WEPVVPLEEGLNKAIHYFRKELEY--QANNQYIPKPK 351
>UNIPROTKB|E1BMI4 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 GeneTree:ENSGT00530000063128 CTD:80146
KO:K08678 GO:GO:0048040 OMA:LGHENFE EMBL:DAAA02031058
EMBL:DAAA02031059 EMBL:DAAA02031060 IPI:IPI00712240
RefSeq:NP_001192993.1 UniGene:Bt.57545 ProteinModelPortal:E1BMI4
Ensembl:ENSBTAT00000007374 GeneID:534788 KEGG:bta:534788
NextBio:20876532 Uniprot:E1BMI4
Length = 420
Score = 307 (113.1 bits), Expect = 5.0e-26, P = 5.0e-26
Identities = 91/337 (27%), Positives = 157/337 (46%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
K IL+TG AGF+ SH+ ++L+ + +++ V+D + +N+ NF+ I DV
Sbjct: 89 KRILVTGGAGFVGSHLTDKLMMD--GHEVTVVDNF-FTGRKRNVEHWIGHENFELINHDV 145
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
L E +D I H A+ N N + K N GT +L K G R
Sbjct: 146 VEP------LYIE-VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--R 196
Query: 128 FIHVSTDEVYGETDEDAVVGNH--EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 185
+ ST EVYG+ + ++ + + P Y K AE + AY + G+ V
Sbjct: 197 LLLASTSEVYGDPEVHPQTEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 256
Query: 186 RGNNVYGPNQFPE--KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG 243
R N +GP +++ FIL A++G+PL ++G GS R++ Y D+ +++
Sbjct: 257 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 316
Query: 244 EVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLK-QLG 302
V N+G +E +++ A I L + ++I+F+ + Q+ D++K K LG
Sbjct: 317 -VSSPVNLGNPEEHTILEFAQLIKNL--VGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLG 373
Query: 303 WYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHPR 339
W V EEGL K + ++ ++ + +P P+
Sbjct: 374 WEPVVPLEEGLNKAIHYFRKELEY--QANNQYIPKPK 408
>UNIPROTKB|Q8NBZ7 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032580 "Golgi cisterna membrane"
evidence=IEA] [GO:0033320 "UDP-D-xylose biosynthetic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 UniPathway:UPA00796 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005739 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0032580 EMBL:AC018878 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AY147934 EMBL:AY358541 EMBL:AK027244
EMBL:AK075120 EMBL:AK075170 EMBL:BC009819 IPI:IPI00410544
IPI:IPI00657807 IPI:IPI00658111 RefSeq:NP_001240804.1
RefSeq:NP_001240805.1 RefSeq:NP_079352.2 UniGene:Hs.469561 PDB:2B69
PDB:4GLL PDBsum:2B69 PDBsum:4GLL ProteinModelPortal:Q8NBZ7
SMR:Q8NBZ7 IntAct:Q8NBZ7 STRING:Q8NBZ7 PhosphoSite:Q8NBZ7
DMDM:74730150 PaxDb:Q8NBZ7 PRIDE:Q8NBZ7 DNASU:80146
Ensembl:ENST00000283148 Ensembl:ENST00000409032
Ensembl:ENST00000409501 GeneID:80146 KEGG:hsa:80146 UCSC:uc002tdl.3
UCSC:uc002tdn.3 GeneCards:GC02M106709 H-InvDB:HIX0030285
HGNC:HGNC:17729 HPA:HPA008825 MIM:609749 neXtProt:NX_Q8NBZ7
PharmGKB:PA38465 OMA:LGHENFE EvolutionaryTrace:Q8NBZ7
GenomeRNAi:80146 NextBio:70422 ArrayExpress:Q8NBZ7 Bgee:Q8NBZ7
CleanEx:HS_UXS1 Genevestigator:Q8NBZ7 GermOnline:ENSG00000115652
Uniprot:Q8NBZ7
Length = 420
Score = 306 (112.8 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 92/337 (27%), Positives = 157/337 (46%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
K ILITG AGF+ SH+ ++L+ + +++ V+D + +N+ NF+ I DV
Sbjct: 89 KRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNF-FTGRKRNVEHWIGHENFELINHDV 145
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
L E +D I H A+ N N + K N GT +L K G R
Sbjct: 146 VEP------LYIE-VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--R 196
Query: 128 FIHVSTDEVYGETDEDAVVGNH--EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 185
+ ST EVYG+ + ++ + + P Y K AE + AY + G+ V
Sbjct: 197 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 256
Query: 186 RGNNVYGPNQFPE--KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG 243
R N +GP +++ FIL A++G+PL ++G GS R++ Y D+ +++
Sbjct: 257 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 316
Query: 244 EVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLK-QLG 302
V N+G +E +++ A I L + ++I+F+ + Q+ D++K K LG
Sbjct: 317 -VSSPVNLGNPEEHTILEFAQLIKNL--VGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLG 373
Query: 303 WYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHPR 339
W V EEGL K + ++ ++ + +P P+
Sbjct: 374 WEPVVPLEEGLNKAIHYFRKELEY--QANNQYIPKPK 408
>MGI|MGI:1915133 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016829 "lyase activity"
evidence=IEA] [GO:0016831 "carboxy-lyase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=ISO] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 MGI:MGI:1915133 GO:GO:0016021 GO:GO:0005739
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 GeneTree:ENSGT00530000063128 CTD:80146
HOVERGEN:HBG094144 KO:K08678 OrthoDB:EOG4ZW5B0 GO:GO:0048040
GO:GO:0033320 OMA:LGHENFE EMBL:AF399958 EMBL:AK075806 EMBL:AK152376
EMBL:BC037049 IPI:IPI00129252 RefSeq:NP_080706.1 UniGene:Mm.387202
ProteinModelPortal:Q91XL3 SMR:Q91XL3 STRING:Q91XL3
PhosphoSite:Q91XL3 PaxDb:Q91XL3 PRIDE:Q91XL3
Ensembl:ENSMUST00000126008 GeneID:67883 KEGG:mmu:67883
UCSC:uc007avq.1 InParanoid:Q91XL3 NextBio:325829 Bgee:Q91XL3
CleanEx:MM_UXS1 Genevestigator:Q91XL3 GermOnline:ENSMUSG00000057363
Uniprot:Q91XL3
Length = 420
Score = 306 (112.8 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 92/337 (27%), Positives = 157/337 (46%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
K ILITG AGF+ SH+ ++L+ + +++ V+D + +N+ NF+ I DV
Sbjct: 89 KRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNF-FTGRKRNVEHWIGHENFELINHDV 145
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
L E +D I H A+ N N + K N GT +L K G R
Sbjct: 146 VEP------LYIE-VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--R 196
Query: 128 FIHVSTDEVYGETDEDAVVGNH--EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 185
+ ST EVYG+ + ++ + + P Y K AE + AY + G+ V
Sbjct: 197 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 256
Query: 186 RGNNVYGPNQFPE--KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG 243
R N +GP +++ FIL A++G+PL ++G GS R++ Y D+ +++
Sbjct: 257 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 316
Query: 244 EVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLK-QLG 302
V N+G +E +++ A I L + ++I+F+ + Q+ D++K K LG
Sbjct: 317 -VSSPVNLGNPEEHTILEFAQLIKNL--VGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLG 373
Query: 303 WYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHPR 339
W V EEGL K + ++ ++ + +P P+
Sbjct: 374 WEPVVPLEEGLNKAIHYFRKELEY--QANNQYIPKPK 408
>RGD|628680 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0032580 "Golgi cisterna membrane" evidence=IEA] [GO:0033320
"UDP-D-xylose biosynthetic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IDA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 RGD:628680 GO:GO:0016021 GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040 GO:GO:0033320
EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702 RefSeq:NP_647552.1
UniGene:Rn.3037 ProteinModelPortal:Q5PQX0 SMR:Q5PQX0 PRIDE:Q5PQX0
GeneID:246232 KEGG:rno:246232 NextBio:623518 Genevestigator:Q5PQX0
Uniprot:Q5PQX0
Length = 420
Score = 306 (112.8 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 92/337 (27%), Positives = 157/337 (46%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
K ILITG AGF+ SH+ ++L+ + +++ V+D + +N+ NF+ I DV
Sbjct: 89 KRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNF-FTGRKRNVEHWIGHENFELINHDV 145
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
L E +D I H A+ N N + K N GT +L K G R
Sbjct: 146 VEP------LYIE-VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--R 196
Query: 128 FIHVSTDEVYGETDEDAVVGNH--EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 185
+ ST EVYG+ + ++ + + P Y K AE + AY + G+ V
Sbjct: 197 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 256
Query: 186 RGNNVYGPNQFPE--KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG 243
R N +GP +++ FIL A++G+PL ++G GS R++ Y D+ +++
Sbjct: 257 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 316
Query: 244 EVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLK-QLG 302
V N+G +E +++ A I L + ++I+F+ + Q+ D++K K LG
Sbjct: 317 -VSSPVNLGNPEEHTILEFAQLIKNL--VGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLG 373
Query: 303 WYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHPR 339
W V EEGL K + ++ ++ + +P P+
Sbjct: 374 WEPVVPLEEGLNKAIHYFRKELEY--QANNQYIPKPK 408
>UNIPROTKB|Q5PQX0 [details] [associations]
symbol:Uxs1 "UDP-glucuronic acid decarboxylase 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
UniPathway:UPA00796 InterPro:IPR016040 RGD:628680 GO:GO:0016021
GO:GO:0005794 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702
RefSeq:NP_647552.1 UniGene:Rn.3037 ProteinModelPortal:Q5PQX0
SMR:Q5PQX0 PRIDE:Q5PQX0 GeneID:246232 KEGG:rno:246232
NextBio:623518 Genevestigator:Q5PQX0 Uniprot:Q5PQX0
Length = 420
Score = 306 (112.8 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 92/337 (27%), Positives = 157/337 (46%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
K ILITG AGF+ SH+ ++L+ + +++ V+D + +N+ NF+ I DV
Sbjct: 89 KRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNF-FTGRKRNVEHWIGHENFELINHDV 145
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
L E +D I H A+ N N + K N GT +L K G R
Sbjct: 146 VEP------LYIE-VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--R 196
Query: 128 FIHVSTDEVYGETDEDAVVGNH--EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 185
+ ST EVYG+ + ++ + + P Y K AE + AY + G+ V
Sbjct: 197 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 256
Query: 186 RGNNVYGPNQFPE--KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG 243
R N +GP +++ FIL A++G+PL ++G GS R++ Y D+ +++
Sbjct: 257 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 316
Query: 244 EVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLK-QLG 302
V N+G +E +++ A I L + ++I+F+ + Q+ D++K K LG
Sbjct: 317 -VSSPVNLGNPEEHTILEFAQLIKNL--VGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLG 373
Query: 303 WYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHPR 339
W V EEGL K + ++ ++ + +P P+
Sbjct: 374 WEPVVPLEEGLNKAIHYFRKELEY--QANNQYIPKPK 408
>UNIPROTKB|Q8E8H8 [details] [associations]
symbol:wcvA "UDP-glucuronate 4-epimerase WcvA"
species:211586 "Shewanella oneidensis MR-1" [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000168000 KO:K08679
GO:GO:0050378 OMA:NTAMPFS GO:GO:0009243 HSSP:P27830
RefSeq:NP_720202.1 ProteinModelPortal:Q8E8H8 GeneID:1172268
KEGG:son:SO_4686 PATRIC:23529037 ProtClustDB:CLSK907767
Uniprot:Q8E8H8
Length = 335
Score = 257 (95.5 bits), Expect = 1.6e-25, Sum P(2) = 1.6e-25
Identities = 70/236 (29%), Positives = 112/236 (47%)
Query: 11 LITGAAGFIASHVCNRLIGNYPEYKIVVLDKL-DYCS---NLKNLNPSRLSPNFKFIKGD 66
L+TGAAGFI ++V RL +++V +D L DY L L P NF FIK D
Sbjct: 4 LVTGAAGFIGANVSKRLCAM--GHEVVGIDNLNDYYDVALKLARLAPLEALSNFHFIKLD 61
Query: 67 VASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIK 126
+A + + + + ++H AAQ V S N + +N+ G +LE C+ +I+
Sbjct: 62 LADREGIAKLFAQQGFQRVIHLAAQAGVRYSLDNPLAYADSNLVGHLTILEGCR-HHKIE 120
Query: 127 RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 186
++ S+ VYG + + + E S P + Y+ATK E++ Y Y LP R
Sbjct: 121 HLVYASSSSVYGLNQK--MPFSTEDSVDHPISLYAATKKANELMSHTYSHLYQLPTTGLR 178
Query: 187 GNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHK 242
VYGP P+ + KF + G+ + ++ G R + Y +D+ E + K
Sbjct: 179 FFTVYGPWGRPDMALFKFTKAILAGETIDVYNHGDLSRDFTYIDDIVEGIIRVQDK 234
Score = 66 (28.3 bits), Expect = 1.6e-25, Sum P(2) = 1.6e-25
Identities = 18/74 (24%), Positives = 36/74 (48%)
Query: 248 VYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKL-KQLGWYER 306
V+NIG +++D T + + + Q F+ +P + + D + L K +G+ +
Sbjct: 258 VFNIGNGSPVQLLDFITALERALGIEAKKQ--FLPMQPGDVHATWADTEDLFKAVGYKSQ 315
Query: 307 VTWEEGLQKTMKWY 320
V + G+ K + WY
Sbjct: 316 VDIDTGVAKFVDWY 329
>TIGR_CMR|SO_4686 [details] [associations]
symbol:SO_4686 "NAD dependent epimerase/dehydratase family
protein" species:211586 "Shewanella oneidensis MR-1" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000168000 KO:K08679
GO:GO:0050378 OMA:NTAMPFS GO:GO:0009243 HSSP:P27830
RefSeq:NP_720202.1 ProteinModelPortal:Q8E8H8 GeneID:1172268
KEGG:son:SO_4686 PATRIC:23529037 ProtClustDB:CLSK907767
Uniprot:Q8E8H8
Length = 335
Score = 257 (95.5 bits), Expect = 1.6e-25, Sum P(2) = 1.6e-25
Identities = 70/236 (29%), Positives = 112/236 (47%)
Query: 11 LITGAAGFIASHVCNRLIGNYPEYKIVVLDKL-DYCS---NLKNLNPSRLSPNFKFIKGD 66
L+TGAAGFI ++V RL +++V +D L DY L L P NF FIK D
Sbjct: 4 LVTGAAGFIGANVSKRLCAM--GHEVVGIDNLNDYYDVALKLARLAPLEALSNFHFIKLD 61
Query: 67 VASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIK 126
+A + + + + ++H AAQ V S N + +N+ G +LE C+ +I+
Sbjct: 62 LADREGIAKLFAQQGFQRVIHLAAQAGVRYSLDNPLAYADSNLVGHLTILEGCR-HHKIE 120
Query: 127 RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 186
++ S+ VYG + + + E S P + Y+ATK E++ Y Y LP R
Sbjct: 121 HLVYASSSSVYGLNQK--MPFSTEDSVDHPISLYAATKKANELMSHTYSHLYQLPTTGLR 178
Query: 187 GNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHK 242
VYGP P+ + KF + G+ + ++ G R + Y +D+ E + K
Sbjct: 179 FFTVYGPWGRPDMALFKFTKAILAGETIDVYNHGDLSRDFTYIDDIVEGIIRVQDK 234
Score = 66 (28.3 bits), Expect = 1.6e-25, Sum P(2) = 1.6e-25
Identities = 18/74 (24%), Positives = 36/74 (48%)
Query: 248 VYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKL-KQLGWYER 306
V+NIG +++D T + + + Q F+ +P + + D + L K +G+ +
Sbjct: 258 VFNIGNGSPVQLLDFITALERALGIEAKKQ--FLPMQPGDVHATWADTEDLFKAVGYKSQ 315
Query: 307 VTWEEGLQKTMKWY 320
V + G+ K + WY
Sbjct: 316 VDIDTGVAKFVDWY 329
>UNIPROTKB|E1BV28 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 CTD:80146 KO:K08678 GO:GO:0048040
OMA:LGHENFE EMBL:AADN02017868 IPI:IPI00574801 RefSeq:XP_416926.1
ProteinModelPortal:E1BV28 Ensembl:ENSGALT00000027123 GeneID:418728
KEGG:gga:418728 NextBio:20821874 Uniprot:E1BV28
Length = 421
Score = 305 (112.4 bits), Expect = 1.9e-25, P = 1.9e-25
Identities = 93/338 (27%), Positives = 159/338 (47%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
K ILITG AGF+ SH+ ++L+ + +++ V+D + +N+ NF+ I DV
Sbjct: 90 KRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNF-FTGRKRNVEHWIGHENFELINHDV 146
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
L E +D I H A+ N N + K N GT +L K G R
Sbjct: 147 VEP------LYIE-VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--R 197
Query: 128 FIHVSTDEVYGETD---EDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 184
+ ST EVYG+ + ++ H + + P Y K AE + AY + G+ V
Sbjct: 198 LLLASTSEVYGDPEVHPQNEDYWGH-VNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRV 256
Query: 185 TRGNNVYGPNQFPE--KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHK 242
R N +GP +++ FIL A++G+PL ++G G+ R++ Y D+ +++
Sbjct: 257 ARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGPGTQTRAFQYVSDLVNGLVALMNS 316
Query: 243 GEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQL- 301
V N+G +E +++ A I KL + ++I+F+ + Q+ D++K K L
Sbjct: 317 N-VSSPVNLGNPEEHTILEFAQLIKKL--VGSGSEIQFLSEAQDDPQKRKPDIRKAKLLL 373
Query: 302 GWYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHPR 339
GW V EEGL K + ++ ++ + +P P+
Sbjct: 374 GWEPVVPLEEGLNKAIHYFRKELEY--QANNQYIPKPK 409
>TIGR_CMR|GSU_1815 [details] [associations]
symbol:GSU_1815 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 KO:K01710
HOGENOM:HOG000168004 OMA:LGHENFE RefSeq:NP_952865.1
ProteinModelPortal:Q74C60 GeneID:2686299 KEGG:gsu:GSU1815
PATRIC:22026487 ProtClustDB:CLSK828578
BioCyc:GSUL243231:GH27-1866-MONOMER Uniprot:Q74C60
Length = 311
Score = 295 (108.9 bits), Expect = 3.4e-25, P = 3.4e-25
Identities = 91/320 (28%), Positives = 161/320 (50%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
IL+TG AGFI SH+C RL+ + ++ LD + + +N++ RL +F +V
Sbjct: 3 ILVTGGAGFIGSHLCERLLEQ--GHDVLCLDNF-FTGSKRNID--RLMDFHRF---EVIR 54
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIK-RF 128
D++ ILL ++D I + A + N + K ++ GT +L K +++ R
Sbjct: 55 HDIIEPILL--EVDRIYNLACPASPVHYQYNPVKTIKTSVMGTINMLGLAK---RVRARI 109
Query: 129 IHVSTDEVYGET----DEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 184
+ ST EVYG+ ++ GN + + + Y K AE L+M Y R G+ +
Sbjct: 110 LQASTSEVYGDPTIHPQPESYWGN--VNPIGIRSCYDEGKRVAETLLMDYHRQNGVDIRI 167
Query: 185 TRGNNVYGPN--QFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHK 242
R N YGP + +++ F++ A++G+ L ++GDGS RS+ Y +D+ + T++
Sbjct: 168 ARIFNTYGPRMAEHDGRVVSNFVVQALRGEDLTVYGDGSQTRSFCYVDDLLDGLVTLMEH 227
Query: 243 GEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFL-DVQKLKQ- 300
+ N+G +E +I+ A I + +QI + P +D R D+ +
Sbjct: 228 DQFCGPVNLGNPEETPIIEFARRIIAM--TGSSSQIIY-RPLPSDDPRQRQPDITLARTI 284
Query: 301 LGWYERVTWEEGLQKTMKWY 320
LGW RV+ +EGL KT++++
Sbjct: 285 LGWEPRVSLDEGLAKTIEYF 304
>UNIPROTKB|F1PU61 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR021761
Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:AAEX03007410 Ensembl:ENSCAFT00000003315 Uniprot:F1PU61
Length = 414
Score = 300 (110.7 bits), Expect = 6.8e-25, P = 6.8e-25
Identities = 91/337 (27%), Positives = 156/337 (46%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
K ILITG AGF+ SH+ ++L+ + +++ V+D + +N+ NF+ I DV
Sbjct: 83 KRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNF-FTGRKRNVEHWIGHENFELINHDV 139
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
L E +D I H A+ N N + K N GT +L K G R
Sbjct: 140 VEP------LYIE-VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--R 190
Query: 128 FIHVSTDEVYGETDEDAVVGNH--EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 185
+ ST EVYG+ + ++ + + P Y K AE + AY + G+ V
Sbjct: 191 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 250
Query: 186 RGNNVYGPNQFPE--KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG 243
R N +GP +++ FIL A++G+PL ++G GS R++ Y D+ +++
Sbjct: 251 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 310
Query: 244 EVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ-LG 302
V N+G +E +++ A I L + ++I+F+ + Q+ D++K K L
Sbjct: 311 -VSSPVNLGNPEEHTILEFAQLIKNL--VGSGSEIQFLSEAQDDPQKRKPDIRKAKMMLA 367
Query: 303 WYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHPR 339
W V EEGL K + ++ ++ + +P P+
Sbjct: 368 WEPVVPLEEGLNKAIHYFRKELEY--QANNQYIPKPK 402
>TIGR_CMR|CBU_0844 [details] [associations]
symbol:CBU_0844 "capsular polysaccharide biosynthesis
protein I" species:227377 "Coxiella burnetii RSA 493" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 HOGENOM:HOG000168000
KO:K08679 OMA:NSAYSAN RefSeq:NP_819864.2 ProteinModelPortal:Q83D94
GeneID:1208737 KEGG:cbu:CBU_0844 PATRIC:17930385
ProtClustDB:CLSK914357 BioCyc:CBUR227377:GJ7S-839-MONOMER
GO:GO:0003974 Uniprot:Q83D94
Length = 339
Score = 256 (95.2 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 71/245 (28%), Positives = 113/245 (46%)
Query: 11 LITGAAGFIASHVCNRLIGNYPEYKIVVLDKL-DYCS-NLKNLNPSRLS--PNFKFIKGD 66
L+TG AGFI H+ RL+ I+ LD L DY NLK ++L P+F F K D
Sbjct: 9 LVTGCAGFIGFHLTKRLLARGDH--ILGLDNLNDYYDVNLKEARLAQLKEFPHFSFHKLD 66
Query: 67 VASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIK 126
+A + + DT++H AAQ V S N + + +N+ G +LE C+ +K
Sbjct: 67 LADRQGMTDLFQKHLFDTVVHLAAQAGVRYSLTNPYAYVDSNLVGFAHILEGCRHQS-VK 125
Query: 127 RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 186
+ S+ VYG ++ + P Y+A+K E++ +Y + LP R
Sbjct: 126 HLVFASSSSVYGANEKYPFSESDNVDH--PIALYAASKKANELMAHSYAHLFQLPCTGLR 183
Query: 187 GNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFD-TILHKGEV 245
VYGP P+ + KF + KP+ ++ G R + Y +D+ + T+ H E
Sbjct: 184 FFTVYGPWGRPDMALFKFTRNLLADKPIDVYNHGKMSRDFTYIDDIVDGILLTLDHPPEP 243
Query: 246 GHVYN 250
Y+
Sbjct: 244 NSAYS 248
Score = 58 (25.5 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 17/75 (22%), Positives = 36/75 (48%)
Query: 248 VYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKL-KQLGWYER 306
+YNIG+ + + + K +LN F+ +P + + DV +L K + R
Sbjct: 263 IYNIGSNNPILLTNFIAILEK--TLNKKAIKNFLPLQPGDVPETYADVSQLEKDFQYRPR 320
Query: 307 VTWEEGLQKTMKWYI 321
++G++ ++WY+
Sbjct: 321 TPLQKGVKNFVEWYL 335
>TIGR_CMR|GSU_2241 [details] [associations]
symbol:GSU_2241 "capsular polysaccharide biosynthesis
protein I" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:NP_953290.1
ProteinModelPortal:Q74AV9 GeneID:2687517 KEGG:gsu:GSU2241
PATRIC:22027337 ProtClustDB:CLSK746800
BioCyc:GSUL243231:GH27-2213-MONOMER Uniprot:Q74AV9
Length = 336
Score = 274 (101.5 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 69/238 (28%), Positives = 113/238 (47%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKL-DYCS-NLK--NLNPSRLSPNFKFIK 64
+IL+TGAAGFI H+ RL+ ++V LD L DY NLK L F F++
Sbjct: 3 SILVTGAAGFIGFHLTKRLLDRGD--RVVGLDNLNDYYDVNLKLDRLRQLEGREGFSFVR 60
Query: 65 GDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQ 124
+A + + ++ D +++ AAQ V S N + +N+ G +LE C+ G
Sbjct: 61 TSLADRPALEDLFAGQRFDVVVNLAAQAGVRYSITNPHAYVDSNLVGFINILEGCRHHG- 119
Query: 125 IKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 184
+K ++ S+ VYG +H P + Y+ATK E++ Y YGLP
Sbjct: 120 VKHLVYASSSSVYGANTAMPFSIHHNVDH--PVSLYAATKKANELMAHTYSSLYGLPTTG 177
Query: 185 TRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHK 242
R VYGP P+ + F ++G+P+ ++ G R + Y +D+ E ++ +
Sbjct: 178 LRFFTVYGPWGRPDMALFLFTKAILEGRPIDVYNFGKMQRDFTYVDDIVEGVTRVMDR 235
Score = 39 (18.8 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 8/30 (26%), Positives = 16/30 (53%)
Query: 292 FLDVQKL-KQLGWYERVTWEEGLQKTMKWY 320
+ DV L +G+ EG+++ ++WY
Sbjct: 301 YADVDDLMNDVGFKPATPIGEGIERFVEWY 330
>TIGR_CMR|CBU_0677 [details] [associations]
symbol:CBU_0677 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HSSP:P09147
EMBL:AF387640 ProteinModelPortal:Q93N66 Uniprot:Q93N66
Length = 344
Score = 288 (106.4 bits), Expect = 1.9e-24, P = 1.9e-24
Identities = 85/325 (26%), Positives = 147/325 (45%)
Query: 11 LITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASA 70
++TG AGFI SH+ + L+ +++ V+D L + +NL +P+ F D+
Sbjct: 7 IVTGGAGFIGSHMVDLLLDC--GFQVRVIDNLKG-GHRRNLEHRANNPDLTFEIKDICEL 63
Query: 71 DLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIH 130
H L E +D + HFA + S N ++ + N+ GT +LE C +K+ ++
Sbjct: 64 SAPH--PLFENVDYVFHFAGIGDIVPSIENPIDYLQTNVMGTVRVLE-CARAANVKKLVY 120
Query: 131 VSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNV 190
++ YG D V E + P PY+ +K E + + YGLPV + R N
Sbjct: 121 AASSSCYGLAD----VPTREDHPIAPQYPYALSKYLGEEAAFHWFQVYGLPVNSIRIFNA 176
Query: 191 YGPNQFPE----KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVG 246
YG + F + KP + GDG+ R +LY DVA AF +VG
Sbjct: 177 YGTRVRTTGVYGAVFGVFFKQKLADKPFTVVGDGTQRRDFLYVTDVARAFLKAAETRKVG 236
Query: 247 HVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ-LGWYE 305
+N+G + + + +L +++++ RP + D+ K+K+ LGW
Sbjct: 237 ETWNLGAGNPQSI----NRLVELIG----GEVEYIPKRPGEPDCTWADISKIKRDLGWEP 288
Query: 306 RVTWEEGLQKTMK----WYISNPDW 326
+T+ +G+ + M W+ + P W
Sbjct: 289 TITFADGVSRMMSEIGVWHDA-PLW 312
>TAIR|locus:2081675 [details] [associations]
symbol:AUD1 "AT3G62830" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS] [GO:0016020
"membrane" evidence=TAS] [GO:0042732 "D-xylose metabolic process"
evidence=IDA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IDA] [GO:0000139 "Golgi membrane" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005886 EMBL:CP002686 GO:GO:0000139
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005768
EMBL:AL162651 GO:GO:0005802 GO:GO:0042732 GO:GO:0008460
GO:GO:0019305 GO:GO:0048040 OMA:FSEALIM UniGene:At.23561
UniGene:At.27002 UniGene:At.63633 EMBL:AY143897 IPI:IPI00539694
PIR:T48072 RefSeq:NP_001118893.1 RefSeq:NP_191842.1
ProteinModelPortal:Q9LZI2 SMR:Q9LZI2 PRIDE:Q9LZI2
EnsemblPlants:AT3G62830.1 EnsemblPlants:AT3G62830.2 GeneID:825458
KEGG:ath:AT3G62830 TAIR:At3g62830 InParanoid:Q9LZI2
PhylomeDB:Q9LZI2 ProtClustDB:PLN02206 Genevestigator:Q9LZI2
Uniprot:Q9LZI2
Length = 445
Score = 302 (111.4 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 90/315 (28%), Positives = 155/315 (49%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
+++TG AGF+ SH+ +RL+ ++V+D + +N+ +PNF+ I+ DV
Sbjct: 121 VVVTGGAGFVGSHLVDRLMARGDT--VIVVDNF-FTGRKENVMHHFSNPNFEMIRHDV-- 175
Query: 70 ADLVHFILLTEKIDTIMHFAAQTH-VDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRF 128
V ILL ++D I H A V F N + K N+ GT +L K G RF
Sbjct: 176 ---VEPILL--EVDQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGA--RF 227
Query: 129 IHVSTDEVYGETDEDAVVGNH--EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 186
+ ST EVYG+ + V + + + + Y K AE L M Y R + V R
Sbjct: 228 LLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIAR 287
Query: 187 GNNVYGPNQFPE--KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE 244
N YGP + +++ F+ A++ +PL ++GDG RS+ + D+ E ++
Sbjct: 288 IFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEH 347
Query: 245 VGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQL-GW 303
VG +N+G E ++++A + + +++P+ I+F N + + D+ K K+L GW
Sbjct: 348 VGP-FNLGNPGEFTMLELAKVVQE--TIDPNANIEFRPNTEDDPHKRKPDITKAKELLGW 404
Query: 304 YERVTWEEGLQKTMK 318
+V+ +GL +K
Sbjct: 405 EPKVSLRQGLPLMVK 419
>TIGR_CMR|BA_5700 [details] [associations]
symbol:BA_5700 "UDP-glucose 4-epimerase" species:198094
"Bacillus anthracis str. Ames" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:Q14376 RefSeq:NP_847846.1 RefSeq:YP_022385.1
RefSeq:YP_031541.1 ProteinModelPortal:Q81JK4 SMR:Q81JK4
DNASU:1085447 EnsemblBacteria:EBBACT00000009571
EnsemblBacteria:EBBACT00000018180 EnsemblBacteria:EBBACT00000022977
GeneID:1085447 GeneID:2816576 GeneID:2853003 KEGG:ban:BA_5700
KEGG:bar:GBAA_5700 KEGG:bat:BAS5304 OMA:TENNIDW
ProtClustDB:CLSK888129 BioCyc:BANT260799:GJAJ-5377-MONOMER
BioCyc:BANT261594:GJ7F-5553-MONOMER Uniprot:Q81JK4
Length = 338
Score = 280 (103.6 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 101/338 (29%), Positives = 151/338 (44%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSR--LSPNFKFIKGDV 67
ILITG AG+I SH C L+ N YKI+V+D L S++++LN + F+F K +V
Sbjct: 3 ILITGGAGYIGSHTCVELLNN--NYKIIVVDNLSN-SSIESLNRVKEITGKQFEFYKENV 59
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
+ + ++ I L I+ ++HFA V S + NNI VL + + +K
Sbjct: 60 LNREKMNEIFLENNIEAVIHFAGFKAVGESTTTPLAYYYNNIISAIVLCDVMQ-KHNVKN 118
Query: 128 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG-LPVITTR 186
FI S+ VYG + E L TNPY TK E ++ ++ + R
Sbjct: 119 FIFSSSATVYGIPKTLPIT---EEFPLSVTNPYGQTKLMIEQIMRDVAKADDEWSIALLR 175
Query: 187 GNNVYG----------PNQFPEKLIPKFILLAM-KGKPLPIHG------DGSNVRSYLYC 229
N +G PN P L+P +A+ K K L I G DG+ VR Y++
Sbjct: 176 YFNPFGAHQSGRIGEDPNGIPNNLMPYVTQVAVGKLKELNIFGNDYPTKDGTGVRDYIHV 235
Query: 230 EDVAEAFDTILHK--GEVG-HVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPF 286
D+A+ L K G YN+GT K V+++ K+ K + RP
Sbjct: 236 VDLAKGHVKALEKVLKTKGIEAYNLGTGKGYSVLEMVKAFEKVSGKK--IPYKVIGRRPG 293
Query: 287 NDQRYFLDVQKLK-QLGWYERVTWEEGLQKTMKWYISN 323
+ F DV K K +LGW EE + +W ++N
Sbjct: 294 DVAICFADVSKAKRELGWEAEYGLEEMCVDSWRWQVNN 331
>UNIPROTKB|Q6T1X6 [details] [associations]
symbol:rmd "GDP-6-deoxy-D-mannose reductase" species:143495
"Aneurinibacillus thermoaerophilus" [GO:0033705
"GDP-4-dehydro-6-deoxy-D-mannose reductase activity" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:AY442352
PDB:2PK3 PDBsum:2PK3 ProteinModelPortal:Q6T1X6 SMR:Q6T1X6
BRENDA:1.1.1.281 EvolutionaryTrace:Q6T1X6 GO:GO:0033705
Uniprot:Q6T1X6
Length = 309
Score = 279 (103.3 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 90/317 (28%), Positives = 154/317 (48%)
Query: 11 LITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASA 70
LITG AGF+ ++ N L E + V +N N ++L PN + I D+ +
Sbjct: 4 LITGVAGFVGKYLANHLT----EQNVEVF------GTSRN-NEAKL-PNVEMISLDIMDS 51
Query: 71 DLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIH 130
V ++ K D I H AA++ V +S+ N N++GT +L+A + + R +
Sbjct: 52 QRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILT 111
Query: 131 VSTDEVYGET-DEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNN 189
+ + E YG E++ V E +QL P +PY +KA ML Y ++YG+ +I TR N
Sbjct: 112 IGSSEEYGMILPEESPVS--EENQLRPMSPYGVSKASVGMLARQYVKAYGMDIIHTRTFN 169
Query: 190 VYGPNQ---FPEKLIPKFIL-LAM-KGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE 244
GP Q F + K I+ + M K +P+ G+ VR + D+ +A+ + G+
Sbjct: 170 HIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYGK 229
Query: 245 VGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ-LGW 303
G VYN+ + R+ DV + + ++ DT++ ++ RP ++LK GW
Sbjct: 230 TGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTELNPLQLRPSEVPTLIGSNKRLKDSTGW 289
Query: 304 YERVTWEEGLQKTMKWY 320
R+ E+ L + ++ Y
Sbjct: 290 KPRIPLEKSLFEILQSY 306
>ZFIN|ZDB-GENE-020419-37 [details] [associations]
symbol:uxs1 "UDP-glucuronic acid decarboxylase 1"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IMP] [GO:0001503 "ossification" evidence=IMP]
[GO:0030166 "proteoglycan biosynthetic process" evidence=IMP]
[GO:0030206 "chondroitin sulfate biosynthetic process"
evidence=IMP] [GO:0015012 "heparan sulfate proteoglycan
biosynthetic process" evidence=IGI;IMP] [GO:0030198 "extracellular
matrix organization" evidence=IGI;IMP] [GO:0050650 "chondroitin
sulfate proteoglycan biosynthetic process" evidence=IGI;IMP]
[GO:0016831 "carboxy-lyase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0032580
"Golgi cisterna membrane" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 ZFIN:ZDB-GENE-020419-37 GO:GO:0016021
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0030198 GO:GO:0032580 GO:GO:0051216 GO:GO:0001503
GO:GO:0015012 GO:GO:0030206 GeneTree:ENSGT00530000063128
EMBL:AF506235 EMBL:BC074058 IPI:IPI00494152 RefSeq:NP_775349.1
UniGene:Dr.79684 ProteinModelPortal:Q6GMI9 SMR:Q6GMI9 STRING:Q6GMI9
Ensembl:ENSDART00000078525 GeneID:192315 KEGG:dre:192315 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 InParanoid:Q6GMI9 KO:K08678
OrthoDB:EOG4ZW5B0 NextBio:20797152 ArrayExpress:Q6GMI9 Bgee:Q6GMI9
GO:GO:0048040 GO:GO:0033320 Uniprot:Q6GMI9
Length = 418
Score = 291 (107.5 bits), Expect = 2.1e-23, P = 2.1e-23
Identities = 90/319 (28%), Positives = 151/319 (47%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
K ILITG AGF+ SH+ ++L+ + +++ V+D + +N+ NF+ I DV
Sbjct: 87 KRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNF-FTGRKRNVEHWIGHENFELINHDV 143
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
L E +D I H A+ N N + K N GT +L K G R
Sbjct: 144 VEP------LYIE-VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--R 194
Query: 128 FIHVSTDEVYGETD---EDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 184
+ ST EVYG+ + ++ H + + P Y K AE + AY + G+ V
Sbjct: 195 LLLASTSEVYGDPEVHPQNEDYWGH-VNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRV 253
Query: 185 TRGNNVYGPNQFPE--KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHK 242
R N +G +++ FIL A++G+ L ++G GS R++ Y D+ ++++
Sbjct: 254 ARIFNTFGSRMHMNDGRVVSNFILQALQGEALTVYGSGSQTRAFQYVSDLVNGLVSLMNS 313
Query: 243 GEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQL- 301
+ N+G +E +++ A I L + + I+F+ + QR D++K K L
Sbjct: 314 N-ISSPVNLGNPEEHTILEFAQLIKSLVASR--SHIQFLPEAQDDPQRRRPDIRKAKLLL 370
Query: 302 GWYERVTWEEGLQKTMKWY 320
GW V EEGL KT++++
Sbjct: 371 GWEPVVPLEEGLNKTIQYF 389
>WB|WBGene00005019 [details] [associations]
symbol:sqv-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040025 "vulval development"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0060465 "pharynx development" evidence=IMP]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0009792
GO:GO:0002009 GO:GO:0005737 GO:GO:0018991 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0040025
GeneTree:ENSGT00530000063128 KO:K08678 GO:GO:0048040 EMBL:FO081016
EMBL:AY147933 PIR:T15892 RefSeq:NP_501418.1 UniGene:Cel.19768
ProteinModelPortal:G5EF65 SMR:G5EF65 EnsemblMetazoa:D2096.4.1
EnsemblMetazoa:D2096.4.2 GeneID:177631 KEGG:cel:CELE_D2096.4
CTD:177631 WormBase:D2096.4 OMA:FSEALIM NextBio:897688
Uniprot:G5EF65
Length = 467
Score = 284 (105.0 bits), Expect = 4.2e-22, P = 4.2e-22
Identities = 90/340 (26%), Positives = 165/340 (48%)
Query: 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKG 65
T K ILITG AGF+ SH+ ++L+ ++++ LD + KN+ PNF+ +
Sbjct: 135 TRKRILITGGAGFVGSHLVDKLM--LDGHEVIALDNY-FTGRKKNVEHWIGHPNFEMVHH 191
Query: 66 DVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQI 125
DV + +F+ ++D I H A+ + N + K N GT +L K ++
Sbjct: 192 DVVNP---YFV----EVDQIYHLASPASPPHYMYNPVKTIKTNTLGTINMLGLAK---RV 241
Query: 126 KRFIHV-STDEVYGETD---EDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 181
K + + ST EVYG+ + + H + + P Y K AE L++AY + +
Sbjct: 242 KATVLLASTSEVYGDPEVHPQPETYWGH-VNTIGPRACYDEGKRVAESLMVAYNKQENIK 300
Query: 182 VITTRGNNVYGPNQFPE--KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTI 239
+ R N +GP +++ FI+ A++ KP+ I+G+G+ RS+ Y D+ + +
Sbjct: 301 IRIARIFNTFGPRMHMNDGRVVSNFIIQALQDKPITIYGNGTQTRSFQYVTDLVDGLIKL 360
Query: 240 LHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKL- 298
++ V NIG +E + AT I L ++I +E++ + Q+ D+++
Sbjct: 361 MNSNYSLPV-NIGNPEEHTIGQFATIIRDLVP-GSTSEIVNLESQQDDPQQRRPDIRRAA 418
Query: 299 KQLGWYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHP 338
+Q+ W +V ++GL KT+ ++ + D G +P P
Sbjct: 419 EQISWAPQVHMKDGLLKTVDYFRAEIDR-NKRGGKPVPEP 457
>TIGR_CMR|BA_5505 [details] [associations]
symbol:BA_5505 "UDP-glucose 4-epimerase" species:198094
"Bacillus anthracis str. Ames" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0046872 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044237 HOGENOM:HOG000168001
OMA:SHPNGYN GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:NP_847665.1 RefSeq:YP_022172.1 RefSeq:YP_031353.1 PDB:2C20
PDBsum:2C20 ProteinModelPortal:Q81K34 SMR:Q81K34 DNASU:1085150
EnsemblBacteria:EBBACT00000011015 EnsemblBacteria:EBBACT00000018769
EnsemblBacteria:EBBACT00000021224 GeneID:1085150 GeneID:2819098
GeneID:2850681 KEGG:ban:BA_5505 KEGG:bar:GBAA_5505 KEGG:bat:BAS5114
ProtClustDB:CLSK917664 BioCyc:BANT260799:GJAJ-5189-MONOMER
BioCyc:BANT261594:GJ7F-5367-MONOMER EvolutionaryTrace:Q81K34
Uniprot:Q81K34
Length = 330
Score = 266 (98.7 bits), Expect = 4.5e-22, P = 4.5e-22
Identities = 95/338 (28%), Positives = 150/338 (44%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVA 68
+ILI G AG+I SH +L+ +VV+D NL+ + ++ KF GD+
Sbjct: 3 SILICGGAGYIGSHAVKKLVDE--GLSVVVVD------NLQTGHEDAITEGAKFYNGDLR 54
Query: 69 SADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRF 128
+ + E I+ +MHFAA + V S ++ NN+YG LLE ++ +F
Sbjct: 55 DKAFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMD-EFKVDKF 113
Query: 129 IHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGN 188
I ST YGE D D + E + PTN Y TK E ++ Y ++ L R
Sbjct: 114 IFSSTAATYGEVDVDLIT---EETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIFRYF 170
Query: 189 NVYG--PNQF------PEK-LIPKFILLAM-KGKPLPIHGD------GSNVRSYLYCED- 231
NV G PN PE LIP + +A+ + + + + GD G+ +R Y++ ED
Sbjct: 171 NVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDL 230
Query: 232 VAEAFDTI--LHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQ 289
VA F + L G YN+G V ++ + ++ N + + R +
Sbjct: 231 VAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREV--TNHEIPAEVAPRRAGDPA 288
Query: 290 RYFLDVQKLKQ-LGWYER-VTWEEGLQKTMKWYISNPD 325
R QK K+ LGW R V + ++ W+ P+
Sbjct: 289 RLVASSQKAKEKLGWDPRYVNVKTIIEHAWNWHQKQPN 326
>TIGR_CMR|GSU_1975 [details] [associations]
symbol:GSU_1975 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
HSSP:P95780 ProtClustDB:CLSK864552 RefSeq:NP_953024.1
ProteinModelPortal:Q74BR6 GeneID:2685764 KEGG:gsu:GSU1975
PATRIC:22026813 OMA:AMKGCDV BioCyc:GSUL243231:GH27-1926-MONOMER
InterPro:IPR026390 TIGRFAMs:TIGR04180 Uniprot:Q74BR6
Length = 336
Score = 265 (98.3 bits), Expect = 5.8e-22, P = 5.8e-22
Identities = 87/324 (26%), Positives = 141/324 (43%)
Query: 8 KNILITGAAGFIASHVCNRLI-GNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGD 66
K IL+TGA GFI SH+ L+ Y V + + L +L+P L + GD
Sbjct: 6 KKILVTGADGFIGSHLTEALLMRGYDTRAFVYYNSFNSWGWLDHLDPELLK-SLDVFAGD 64
Query: 67 VASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIK 126
+ V + + D ++H AA + S+ + + N+ GT +++A + G +
Sbjct: 65 IRDPHGVREAM--KGCDVVLHLAALIAIPYSYHSPDTYVDTNVKGTLNVVQAARELG-VA 121
Query: 127 RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 186
+ +H ST EVYG + H L +PYSA+K GA+ + M++ S+ PV R
Sbjct: 122 KVVHTSTSEVYGTARFVPITEEHP---LQGQSPYSASKIGADQIAMSFYSSFDTPVAIIR 178
Query: 187 GNNVYGPNQFPEKLIPKFIL-LAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE- 244
N YGP Q IP I +A + L + G R Y D F + +
Sbjct: 179 PFNTYGPRQSARAFIPTVITQIASGARTLRL-GALHPTRDLNYVADTVAGFIAVAESEKS 237
Query: 245 VGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQ--RYFLDVQKLKQL- 301
VG V NIG+ E + + A I + + + RP + R + D K K+L
Sbjct: 238 VGEVINIGSNFEISMGETARMIADVMGADVEIVTDAERLRPDKSEVERLWADTSKAKRLL 297
Query: 302 ----GWYERVTWEEGLQKTMKWYI 321
+ + GL +T++W++
Sbjct: 298 DHGQNYGGKDGLRRGLVETVEWFV 321
>UNIPROTKB|Q47Y09 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 264 (98.0 bits), Expect = 7.4e-22, P = 7.4e-22
Identities = 96/335 (28%), Positives = 152/335 (45%)
Query: 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKL--DYCSNLKNLNPSRLSP----N 59
+PK LITG AGFI S++ L+ K+V LD + N + +++S N
Sbjct: 14 SPKTWLITGCAGFIGSNLLETLL--LLNQKVVGLDNFATGHQHNFDEVQ-TQVSAEQWQN 70
Query: 60 FKFIKGDVASADLVHFILLTEK--IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLE 117
F F+KGD+ + L K +D I+H AA V S + NI G +L
Sbjct: 71 FYFVKGDIRQLEDCQTALSHYKSGVDYILHQAALGSVPRSIADPLLTNSANITGFLTMLT 130
Query: 118 ACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS 177
A K T Q+K F++ ++ YG D A+ +A P +PY+ TK E+ + ++
Sbjct: 131 AAKET-QVKSFVYAASSSTYG--DHPALPKVEDAIGK-PLSPYAVTKYVNELYADVFHKT 186
Query: 178 YGLPVITTRGNNVYGPNQFPE----KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVA 233
YGL R NV+G Q P+ +IPK+ + + + L I+GDG R + + E+
Sbjct: 187 YGLNCTGLRYFNVFGKRQDPDGAYAAVIPKWTVAMIANEELLINGDGETSRDFCFVENAV 246
Query: 234 EAFDTILHKGEVG--HVYNIGTKKERRVIDVATDICKL-FSLNPDTQIKFVENRPFN--D 288
+A + G VYN+ +R ++ + K+ N K + F D
Sbjct: 247 QANILAATANDAGKNQVYNVALG-DRTSLNTLFNSLKVALQANGVDYQKSPTYQDFRAGD 305
Query: 289 QRYF-LDVQKLKQL-GWYERVTWEEGLQKTMKWYI 321
R+ D+ K K L G+ ++G+ K M WYI
Sbjct: 306 VRHSQADISKAKSLIGFEPEFKIQQGIDKAMPWYI 340
>TIGR_CMR|CPS_3643 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 264 (98.0 bits), Expect = 7.4e-22, P = 7.4e-22
Identities = 96/335 (28%), Positives = 152/335 (45%)
Query: 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKL--DYCSNLKNLNPSRLSP----N 59
+PK LITG AGFI S++ L+ K+V LD + N + +++S N
Sbjct: 14 SPKTWLITGCAGFIGSNLLETLL--LLNQKVVGLDNFATGHQHNFDEVQ-TQVSAEQWQN 70
Query: 60 FKFIKGDVASADLVHFILLTEK--IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLE 117
F F+KGD+ + L K +D I+H AA V S + NI G +L
Sbjct: 71 FYFVKGDIRQLEDCQTALSHYKSGVDYILHQAALGSVPRSIADPLLTNSANITGFLTMLT 130
Query: 118 ACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS 177
A K T Q+K F++ ++ YG D A+ +A P +PY+ TK E+ + ++
Sbjct: 131 AAKET-QVKSFVYAASSSTYG--DHPALPKVEDAIGK-PLSPYAVTKYVNELYADVFHKT 186
Query: 178 YGLPVITTRGNNVYGPNQFPE----KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVA 233
YGL R NV+G Q P+ +IPK+ + + + L I+GDG R + + E+
Sbjct: 187 YGLNCTGLRYFNVFGKRQDPDGAYAAVIPKWTVAMIANEELLINGDGETSRDFCFVENAV 246
Query: 234 EAFDTILHKGEVG--HVYNIGTKKERRVIDVATDICKL-FSLNPDTQIKFVENRPFN--D 288
+A + G VYN+ +R ++ + K+ N K + F D
Sbjct: 247 QANILAATANDAGKNQVYNVALG-DRTSLNTLFNSLKVALQANGVDYQKSPTYQDFRAGD 305
Query: 289 QRYF-LDVQKLKQL-GWYERVTWEEGLQKTMKWYI 321
R+ D+ K K L G+ ++G+ K M WYI
Sbjct: 306 VRHSQADISKAKSLIGFEPEFKIQQGIDKAMPWYI 340
>UNIPROTKB|Q489C2 [details] [associations]
symbol:CPS_0592 "Capsular polysaccharide biosynthesis
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] [GO:0045227 "capsule polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0045227 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:YP_267342.1
ProteinModelPortal:Q489C2 STRING:Q489C2 GeneID:3519977
KEGG:cps:CPS_0592 PATRIC:21464513 ProtClustDB:CLSK2396596
BioCyc:CPSY167879:GI48-679-MONOMER Uniprot:Q489C2
Length = 334
Score = 261 (96.9 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 89/332 (26%), Positives = 148/332 (44%)
Query: 11 LITGAAGFIASHVCNRLIGNYPEYKIVVLDKL-DYCS-NLKNLNPSRLS-PNFKFIKGDV 67
L+TGAAGFI S V RL + +V +D + DY LK +R+ +F FIK D+
Sbjct: 4 LVTGAAGFIGSAVVERLCA--AGHDVVGIDNINDYYDIALKQARLARIEHASFSFIKMDI 61
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
A +++ + ++ D ++H AAQ V S N + +N+ G +LE C+ Q+K
Sbjct: 62 ADRNVMAELFTAQQFDKVVHLAAQAGVRYSIENPMAYADSNLIGHLNVLEGCR-NNQVKH 120
Query: 128 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 187
I+ S+ VYG ++ P + Y+ATK E++ +Y Y +P R
Sbjct: 121 LIYASSSSVYGLNNKVPFSTKDTVDH--PVSLYAATKKSNELMAHSYSHLYNIPTTGLRF 178
Query: 188 NNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAF----DTILH-- 241
VYG P+ F + G + I+ +G R + + +D+ E D I
Sbjct: 179 FTVYGSWGRPDMAPYIFTKKILNGDTIDINNNGDMWRDFTHVDDIVEGVIRIADVIPERD 238
Query: 242 ---KGEVGH---------VYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQ 289
K E G VYNIG ++D I L + + F E +P +
Sbjct: 239 AEWKVESGSPATSSAPYSVYNIGHGSPISLMDFVKAIED--ELGIEAKKNFREMQPGDVY 296
Query: 290 RYFLDVQKL-KQLGWYERVTWEEGLQKTMKWY 320
+ + D Q L K + +++ +EG+ + + W+
Sbjct: 297 QTYADTQDLFKATNYVPKISVKEGVAELVVWF 328
>TIGR_CMR|CPS_0592 [details] [associations]
symbol:CPS_0592 "capsular polysaccharide biosynthesis
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] [GO:0045227 "capsule polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0045227 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:YP_267342.1
ProteinModelPortal:Q489C2 STRING:Q489C2 GeneID:3519977
KEGG:cps:CPS_0592 PATRIC:21464513 ProtClustDB:CLSK2396596
BioCyc:CPSY167879:GI48-679-MONOMER Uniprot:Q489C2
Length = 334
Score = 261 (96.9 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 89/332 (26%), Positives = 148/332 (44%)
Query: 11 LITGAAGFIASHVCNRLIGNYPEYKIVVLDKL-DYCS-NLKNLNPSRLS-PNFKFIKGDV 67
L+TGAAGFI S V RL + +V +D + DY LK +R+ +F FIK D+
Sbjct: 4 LVTGAAGFIGSAVVERLCA--AGHDVVGIDNINDYYDIALKQARLARIEHASFSFIKMDI 61
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
A +++ + ++ D ++H AAQ V S N + +N+ G +LE C+ Q+K
Sbjct: 62 ADRNVMAELFTAQQFDKVVHLAAQAGVRYSIENPMAYADSNLIGHLNVLEGCR-NNQVKH 120
Query: 128 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 187
I+ S+ VYG ++ P + Y+ATK E++ +Y Y +P R
Sbjct: 121 LIYASSSSVYGLNNKVPFSTKDTVDH--PVSLYAATKKSNELMAHSYSHLYNIPTTGLRF 178
Query: 188 NNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAF----DTILH-- 241
VYG P+ F + G + I+ +G R + + +D+ E D I
Sbjct: 179 FTVYGSWGRPDMAPYIFTKKILNGDTIDINNNGDMWRDFTHVDDIVEGVIRIADVIPERD 238
Query: 242 ---KGEVGH---------VYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQ 289
K E G VYNIG ++D I L + + F E +P +
Sbjct: 239 AEWKVESGSPATSSAPYSVYNIGHGSPISLMDFVKAIED--ELGIEAKKNFREMQPGDVY 296
Query: 290 RYFLDVQKL-KQLGWYERVTWEEGLQKTMKWY 320
+ + D Q L K + +++ +EG+ + + W+
Sbjct: 297 QTYADTQDLFKATNYVPKISVKEGVAELVVWF 328
>TIGR_CMR|DET_0204 [details] [associations]
symbol:DET_0204 "NAD-dependent epimerase/dehydratase
family protein" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0016491 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0044237
GO:GO:0055114 KO:K01784 HOGENOM:HOG000167994 RefSeq:YP_180952.1
ProteinModelPortal:Q3Z9Z7 STRING:Q3Z9Z7 GeneID:3230493
KEGG:det:DET0204 PATRIC:21607483 OMA:NTLATHN ProtClustDB:CLSK837597
BioCyc:DETH243164:GJNF-204-MONOMER Uniprot:Q3Z9Z7
Length = 312
Score = 251 (93.4 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 87/314 (27%), Positives = 143/314 (45%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
+L+TG GFI SH+ + L+ +K+ V+D L S L+NL + + I G++
Sbjct: 4 VLVTGGCGFIGSHLVDALLSQ--GFKVRVMDNLSNGS-LENLKCGQRD-KLEIINGNLTD 59
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFI 129
L+ + + +T+ H AA +V NS ++ +NN TH LLEA + ++ R +
Sbjct: 60 KFLLDSAV--KGCETVFHLAAHANVQNSAKDTGIDLENNTLATHNLLEAMR-RNRVDRLV 116
Query: 130 HVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNN 189
S+ VYGE+ V + + LLP + Y A+K E L+ AY YGL R N
Sbjct: 117 FASSAAVYGESG--LTVLDEDYGPLLPISLYGASKLAGEGLISAYSHLYGLKATMFRFAN 174
Query: 190 VYGPNQFPEKLIPKFIL-LAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG--EVG 246
+ G + +I F+ L L + GDGS + YL+ D K +G
Sbjct: 175 IVGSRRH-SGVIYDFVSRLRQNPSSLLVLGDGSQSKPYLHVSDCVAGMLLGFEKSTKNLG 233
Query: 247 HVYNIGTKKERRVIDVATDICKLFSL-NPDTQIKFVENRPFNDQ-RYFLDVQKLKQLGWY 304
+YN+GT V D+A + L N E D + D+ +++ LG+
Sbjct: 234 -LYNLGTPDSVAVRDIACLVASEMGLKNVCYSYSGGERGWQGDAPQVRFDISRIRTLGFK 292
Query: 305 ERVTWEEGLQKTMK 318
+ T + ++ +K
Sbjct: 293 PKFTSLQAVKLAIK 306
>FB|FBgn0035848 [details] [associations]
symbol:CG7979 species:7227 "Drosophila melanogaster"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 EMBL:AE014296 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K08678 OMA:LGHENFE
EMBL:AY051913 RefSeq:NP_648182.1 UniGene:Dm.20044 HSSP:P93031
SMR:Q9VSE8 STRING:Q9VSE8 EnsemblMetazoa:FBtr0076690 GeneID:38911
KEGG:dme:Dmel_CG7979 UCSC:CG7979-RA FlyBase:FBgn0035848
InParanoid:Q9VSE8 OrthoDB:EOG45HQCS GenomeRNAi:38911 NextBio:810971
Uniprot:Q9VSE8
Length = 441
Score = 256 (95.2 bits), Expect = 5.0e-19, P = 5.0e-19
Identities = 89/322 (27%), Positives = 149/322 (46%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
K ILITG AGF+ SH+ + L+ ++++V+D + +N+ NF+ I D+
Sbjct: 116 KRILITGGAGFVGSHLVDDLM--VQGHEVIVVDNF-FTGRKRNVEHWLGHENFELIHHDI 172
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGT-HVLLEACKITGQIK 126
+ L E ID I H A+ + N + K N GT +VL A ++ ++
Sbjct: 173 VNP------LFIE-IDEIYHLASPASPPHYMYNPVKTIKTNTMGTINVLGLAKRVMAKV- 224
Query: 127 RFIHVSTDEVYGETD---EDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVI 183
+ ST EVYG+ + H + + P Y K +E L AY + + V
Sbjct: 225 --LIASTSEVYGDPTVHPQPETYWGH-VNPIGPRACYDEGKRVSETLSYAYAKQEKVQVR 281
Query: 184 TTRGNNVYGPNQFPE--KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILH 241
R N YGP +++ FIL A++ + + ++G+G RS+ Y D+ + ++
Sbjct: 282 VARIFNTYGPRMHMNDGRVVSNFILQALRNETITVYGNGKQTRSFQYVSDLVDGMIALMA 341
Query: 242 KGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDT--QIKFVENRPFNDQRYFLDVQKLK 299
V N+G E+ + + A I KL P Q K +E+ P QR D+ + +
Sbjct: 342 SNYTQPV-NLGNPVEQTIGEFAEIIKKLVG-GPSVIKQSKAMEDDP---QRRKPDITRAR 396
Query: 300 QL-GWYERVTWEEGLQKTMKWY 320
QL W +V E GLQ+T+ ++
Sbjct: 397 QLLHWEPKVPLETGLQRTISYF 418
>TAIR|locus:2163401 [details] [associations]
symbol:DUR "DEFECTIVE UGE IN ROOT" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0006012 "galactose
metabolic process" evidence=IEA] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00797 UniPathway:UPA00963 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580 GO:GO:0045227
eggNOG:COG1087 HOGENOM:HOG000168001 KO:K12448
ProtClustDB:CLSN2686084 GO:GO:0050373 GO:GO:0003978 GO:GO:0006012
GO:GO:0033358 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 EMBL:AB017065 IPI:IPI00546765
RefSeq:NP_199261.1 UniGene:At.55356 ProteinModelPortal:Q9FI17
SMR:Q9FI17 STRING:Q9FI17 PaxDb:Q9FI17 PRIDE:Q9FI17
EnsemblPlants:AT5G44480.1 GeneID:834475 KEGG:ath:AT5G44480
TAIR:At5g44480 InParanoid:Q9FI17 OMA:VRWGPLE PhylomeDB:Q9FI17
Genevestigator:Q9FI17 GermOnline:AT5G44480 Uniprot:Q9FI17
Length = 436
Score = 187 (70.9 bits), Expect = 5.6e-19, Sum P(2) = 5.6e-19
Identities = 55/188 (29%), Positives = 91/188 (48%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP-SRLSPN---FKFIK 64
++L+TG AG+I SH RL+ + Y++ ++D L NL + +L P +FI
Sbjct: 96 HVLVTGGAGYIGSHAALRLLRD--SYRVTIVDNLSR-GNLGAVKTLQQLFPQTGRLQFIY 152
Query: 65 GDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQ 124
D+ V I D +MHFAA +V S ++ N T +LEA +
Sbjct: 153 ADLGDPLAVEKIFSENAFDAVMHFAAVAYVGESTLYPLKYYHNITSNTLGVLEAMA-RHK 211
Query: 125 IKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 184
+K+ I+ ST YGE ++ + E + +P NPY K AE +++ + ++ + V+
Sbjct: 212 VKKLIYSSTCATYGEPEKMPIT---EDTPQVPINPYGKAKKMAEDMILDFSKNSDMAVMI 268
Query: 185 TRGNNVYG 192
R NV G
Sbjct: 269 LRYFNVIG 276
Score = 118 (46.6 bits), Expect = 5.6e-19, Sum P(2) = 5.6e-19
Identities = 37/123 (30%), Positives = 59/123 (47%)
Query: 207 LAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTKKERRVIDVA 263
L +KG DG+ +R Y+ D+ +A L K + VG +YN+GT K R V +
Sbjct: 312 LQVKGTDYKT-SDGTCIRDYIDVTDLVDAHVKALEKAQPRKVG-IYNVGTGKGRSVKEFV 369
Query: 264 TDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQK-LKQLGWYERVT-WEEGLQKTMKWYI 321
+ CK + + ++ F+ RP + + D K LK L W R T ++ LQ +W
Sbjct: 370 -EACKK-ATGVEIKVDFLPRRPGDYAEVYSDPTKILKDLNWTARFTNLQDSLQVAWRWQK 427
Query: 322 SNP 324
+P
Sbjct: 428 IHP 430
>TAIR|locus:2204639 [details] [associations]
symbol:MUR4 "MURUS 4" species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA;ISS] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISM;IDA] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0019567 "arabinose biosynthetic process" evidence=IMP]
[GO:0050373 "UDP-arabinose 4-epimerase activity" evidence=IDA]
[GO:0009723 "response to ethylene stimulus" evidence=RCA]
[GO:0009738 "abscisic acid mediated signaling pathway"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] [GO:0052542 "defense response by callose deposition"
evidence=RCA] [GO:0009832 "plant-type cell wall biogenesis"
evidence=IMP] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00797 UniPathway:UPA00963 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
GO:GO:0045227 GO:GO:0009832 EMBL:AY195742 EMBL:AF083751
EMBL:AC007060 EMBL:AY064973 EMBL:BT002614 EMBL:AF325108
EMBL:AK220800 IPI:IPI00521995 PIR:E86431 RefSeq:NP_001031118.1
RefSeq:NP_174350.2 UniGene:At.20201 ProteinModelPortal:Q9SA77
SMR:Q9SA77 STRING:Q9SA77 PaxDb:Q9SA77 PRIDE:Q9SA77
EnsemblPlants:AT1G30620.1 EnsemblPlants:AT1G30620.2 GeneID:839942
KEGG:ath:AT1G30620 TAIR:At1g30620 eggNOG:COG1087
HOGENOM:HOG000168001 InParanoid:Q9SA77 KO:K12448 OMA:SHPNGYN
PhylomeDB:Q9SA77 ProtClustDB:CLSN2686084
BioCyc:MetaCyc:AT1G30620-MONOMER Genevestigator:Q9SA77
GermOnline:AT1G30620 GO:GO:0050373 GO:GO:0003978 GO:GO:0019567
GO:GO:0006012 GO:GO:0033358 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Uniprot:Q9SA77
Length = 419
Score = 203 (76.5 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 60/194 (30%), Positives = 93/194 (47%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP-SRLSPN---FKFIK 64
++L+TG AG+I SH RL+ Y++ ++D L NL + L P +FI
Sbjct: 72 HVLVTGGAGYIGSHAALRLLKE--SYRVTIVDNLSR-GNLAAVRILQELFPEPGRLQFIY 128
Query: 65 GDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQ 124
D+ A V+ I D +MHFAA +V S ++ N T V+LE G
Sbjct: 129 ADLGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVLETMAAHG- 187
Query: 125 IKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 184
+K I+ ST YGE D ++ E + +P NPY K AE +++ + ++ + V+
Sbjct: 188 VKTLIYSSTCATYGEPD---IMPITEETPQVPINPYGKAKKMAEDIILDFSKNSDMAVMI 244
Query: 185 TRGNNVYGPNQFPE 198
R NV G + PE
Sbjct: 245 LRYFNVIGSD--PE 256
Score = 96 (38.9 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 33/118 (27%), Positives = 56/118 (47%)
Query: 207 LAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTKKERRVIDVA 263
L +KG DG+ VR Y+ D+ +A L K + VG +YN+GT K V +
Sbjct: 288 LQIKGTDYKT-ADGTCVRDYIDVTDLVDAHVKALQKAKPRKVG-IYNVGTGKGSSVKEFV 345
Query: 264 TDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKL-KQLGWYERVT-WEEGLQKTMKW 319
+ CK + + +I ++ R + + D K+ K+L W + T +E L+ +W
Sbjct: 346 -EACKK-ATGVEIKIDYLPRRAGDYAEVYSDPSKIRKELNWTAKHTNLKESLETAWRW 401
>UNIPROTKB|Q8ECF3 [details] [associations]
symbol:wbpP "UDP-GlkcNAc C4 epimerase WbpP" species:211586
"Shewanella oneidensis MR-1" [GO:0000271 "polysaccharide
biosynthetic process" evidence=ISS] [GO:0003824 "catalytic
activity" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 243 (90.6 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 90/330 (27%), Positives = 143/330 (43%)
Query: 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKL-----DYCSNLKNLNPSRLSPNF 60
+PK LITG AGFI S++ +L+ ++ LD +++L S F
Sbjct: 14 SPKTWLITGVAGFIGSNLLEQLLKL--NQTVIGLDNFATGRQHNLDEVQSLVTSEQWMRF 71
Query: 61 KFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 120
FI GD+ + ++ +D ++H AA V S + NI G +L+A K
Sbjct: 72 SFINGDIRDYAICEAVV--NGVDYVLHQAALGSVPRSIADPITTNAANITGFLNMLQAAK 129
Query: 121 ITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 180
++K F + ++ YG D A+ E + P +PY+ TK E+ Y R+YG
Sbjct: 130 -EAEVKSFTYAASSSTYG--DHPALP-KVEQNIGNPLSPYAVTKYVNELYASVYARTYGF 185
Query: 181 PVITTRGNNVYGPNQFPE----KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEA- 235
I R NV+G Q P +IPK+ +KG+ + I+GDG R + Y ++V +
Sbjct: 186 ETIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIKGEDVFINGDGETSRDFCYIDNVVQMN 245
Query: 236 FDTILHKGEV-GHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFN--DQRYF 292
E VYN+ + D+ I + N + R F D R+
Sbjct: 246 ILAATAASEAKNEVYNVAVGDRTTLNDLYFAIKDSLNANGINVNQNPNYRDFRAGDVRHS 305
Query: 293 -LDVQK-LKQLGWYERVTWEEGLQKTMKWY 320
DV K + +LG+ EG+ + M WY
Sbjct: 306 QADVSKAVTRLGYQYTHKILEGISEAMPWY 335
>TIGR_CMR|SO_3189 [details] [associations]
symbol:SO_3189 "polysaccharide biosynthesis protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 243 (90.6 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 90/330 (27%), Positives = 143/330 (43%)
Query: 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKL-----DYCSNLKNLNPSRLSPNF 60
+PK LITG AGFI S++ +L+ ++ LD +++L S F
Sbjct: 14 SPKTWLITGVAGFIGSNLLEQLLKL--NQTVIGLDNFATGRQHNLDEVQSLVTSEQWMRF 71
Query: 61 KFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 120
FI GD+ + ++ +D ++H AA V S + NI G +L+A K
Sbjct: 72 SFINGDIRDYAICEAVV--NGVDYVLHQAALGSVPRSIADPITTNAANITGFLNMLQAAK 129
Query: 121 ITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 180
++K F + ++ YG D A+ E + P +PY+ TK E+ Y R+YG
Sbjct: 130 -EAEVKSFTYAASSSTYG--DHPALP-KVEQNIGNPLSPYAVTKYVNELYASVYARTYGF 185
Query: 181 PVITTRGNNVYGPNQFPE----KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEA- 235
I R NV+G Q P +IPK+ +KG+ + I+GDG R + Y ++V +
Sbjct: 186 ETIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIKGEDVFINGDGETSRDFCYIDNVVQMN 245
Query: 236 FDTILHKGEV-GHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFN--DQRYF 292
E VYN+ + D+ I + N + R F D R+
Sbjct: 246 ILAATAASEAKNEVYNVAVGDRTTLNDLYFAIKDSLNANGINVNQNPNYRDFRAGDVRHS 305
Query: 293 -LDVQK-LKQLGWYERVTWEEGLQKTMKWY 320
DV K + +LG+ EG+ + M WY
Sbjct: 306 QADVSKAVTRLGYQYTHKILEGISEAMPWY 335
>UNIPROTKB|Q9HTB6 [details] [associations]
symbol:rmd "GDP-6-deoxy-D-mannose reductase" species:208964
"Pseudomonas aeruginosa PAO1" [GO:0033705
"GDP-4-dehydro-6-deoxy-D-mannose reductase activity" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 PseudoCAP:PA5454
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AE004091 GenomeReviews:AE004091_GR GO:GO:0033705 EMBL:AF009955
PIR:H82964 RefSeq:NP_254141.1 HSSP:P27830 ProteinModelPortal:Q9HTB6
SMR:Q9HTB6 GeneID:883037 KEGG:pae:PA5454 PATRIC:19845791
HOGENOM:HOG000167992 OMA:NLLEACA ProtClustDB:CLSK869364
Uniprot:Q9HTB6
Length = 304
Score = 222 (83.2 bits), Expect = 3.3e-18, Sum P(2) = 3.3e-18
Identities = 73/255 (28%), Positives = 120/255 (47%)
Query: 77 LLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEV 136
L E D ++H A QT+V +F + + N+ GT LL+A K G F+++S+ +V
Sbjct: 49 LWPELPDAVIHLAGQTYVPEAFRDPARTLQINLLGTLNLLQALKARGFSGTFLYISSGDV 108
Query: 137 YGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQF 196
YG+ E A + HE P NPY+ +K AE L + +G + G V+ R N GP Q
Sbjct: 109 YGQVAE-AALPIHEELIPHPRNPYAVSKLAAESLCLQWGITEGWRVLVARPFNHIGPGQK 167
Query: 197 PEKLIPKFI--LLAMK----GKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGHVYN 250
+I + MK L + GD R +L +DV A+ +L GE G VYN
Sbjct: 168 DSFVIASAARQIARMKQGLQANRLEV-GDIDVSRDFLDVQDVLSAYLRLLSHGEAGAVYN 226
Query: 251 IGTKKERRV---IDVATDICKL-FSLNPD-TQIKFVENRPFNDQRYFLDVQKLKQLGWYE 305
+ + +E+++ I++ DI ++ + D +++ E R L GW
Sbjct: 227 VCSGQEQKIRELIELLADIAQVELEIVQDPARMRRAEQRRVRGSHARLH----DTTGWKP 282
Query: 306 RVTWEEGLQKTMK-W 319
+T ++ L+ + W
Sbjct: 283 EITIKQSLRAILSDW 297
Score = 41 (19.5 bits), Expect = 3.3e-18, Sum P(2) = 3.3e-18
Identities = 5/16 (31%), Positives = 11/16 (68%)
Query: 8 KNILITGAAGFIASHV 23
+ + +TG +GF+ H+
Sbjct: 3 QRLFVTGLSGFVGKHL 18
>TAIR|locus:2118711 [details] [associations]
symbol:GAE1 "UDP-D-glucuronate 4-epimerase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AL161577 EMBL:AY661562 EMBL:AY056303
EMBL:AY099855 EMBL:BT000308 EMBL:AY085505 IPI:IPI00530645
PIR:A85356 RefSeq:NP_194773.1 UniGene:At.20969 UniGene:At.67043
HSSP:P04397 ProteinModelPortal:Q9M0B6 SMR:Q9M0B6 STRING:Q9M0B6
PaxDb:Q9M0B6 PRIDE:Q9M0B6 EnsemblPlants:AT4G30440.1 GeneID:829167
KEGG:ath:AT4G30440 TAIR:At4g30440 HOGENOM:HOG000168000
InParanoid:Q9M0B6 KO:K08679 OMA:DELMSET PhylomeDB:Q9M0B6
ProtClustDB:CLSN2679288 Genevestigator:Q9M0B6 GO:GO:0050378
Uniprot:Q9M0B6
Length = 429
Score = 246 (91.7 bits), Expect = 6.1e-18, P = 6.1e-18
Identities = 96/351 (27%), Positives = 151/351 (43%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD--YCSNLKNLNPSRLSPNFKFI-KG 65
++L+TGA GF+ SHV L +V LD + Y +LK S LS F+ +G
Sbjct: 89 SVLVTGATGFVGSHVSLALRKRGDG--VVGLDNFNNYYDPSLKRARRSLLSSRGIFVVEG 146
Query: 66 DVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQI 125
D+ A L+ + +MH AAQ V + N + +NI G LLE CK
Sbjct: 147 DLNDAKLLAKLFDVVAFTHVMHLAAQAGVRYALENPQSYVHSNIAGLVNLLEICKAANPQ 206
Query: 126 KRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 185
+ S+ VYG ++ + Q P + Y+ATK E + Y YGL +
Sbjct: 207 PAIVWASSSSVYGLNEKVPFSESDRTDQ--PASLYAATKKAGEEITHTYNHIYGLAITGL 264
Query: 186 RGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNV---RSYLYCEDVAE----AFDT 238
R VYGP P+ F ++GKP+ I+ + V R + Y +D+ + + D+
Sbjct: 265 RFFTVYGPWGRPDMAYFSFTRNILQGKPITIYRGKNRVDLARDFTYIDDIVKGCLGSLDS 324
Query: 239 I-LHKGEVG--------HVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQ 289
G G ++N+G V + DI + L + FVE P N
Sbjct: 325 SGKSTGSGGKKRGAAPYRIFNLGNTSPVTV-PILVDILEKH-LKVKAKRNFVE-MPGNGD 381
Query: 290 RYFL--DVQKLK-QLGWYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPH 337
F ++ + + G+ E GL+K ++WY+S ++G + A L H
Sbjct: 382 VPFTHANISSARNEFGYKPTTDLETGLKKFVRWYLS---YYGYNTKAKLVH 429
>UNIPROTKB|O53634 [details] [associations]
symbol:gca "POSSIBLE GDP-MANNOSE 4,6-DEHYDRATASE GCA
(GDP-D-MANNOSE DEHYDRATASE)" species:83332 "Mycobacterium
tuberculosis H37Rv" [GO:0040007 "growth" evidence=IMP]
InterPro:IPR001509 InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061
InterPro:IPR016040 GO:GO:0040007 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016491 EMBL:BX842572 GO:GO:0044237
GO:GO:0055114 KO:K01711 GO:GO:0008446 HOGENOM:HOG000167992
HSSP:P32054 EMBL:CP003248 PIR:C70840 RefSeq:NP_214626.1
RefSeq:NP_334530.1 RefSeq:YP_006513430.1 SMR:O53634 DNASU:886907
EnsemblBacteria:EBMYCT00000003264 EnsemblBacteria:EBMYCT00000070103
GeneID:13316094 GeneID:886907 GeneID:922974 KEGG:mtc:MT0121
KEGG:mtu:Rv0112 KEGG:mtv:RVBD_0112 PATRIC:18121990
TubercuList:Rv0112 OMA:CSGVATR ProtClustDB:CLSK790272
Uniprot:O53634
Length = 318
Score = 232 (86.7 bits), Expect = 6.2e-18, P = 6.2e-18
Identities = 80/307 (26%), Positives = 132/307 (42%)
Query: 10 ILITGAAGFIASHVCNRLIG-NYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVA 68
+ ITGA G + SH+ L+ + Y YC ++PS L F + D+
Sbjct: 3 VWITGAGGMMGSHLAEMLLAAGHDVYAT-------YCR--PTIDPSDLQ--FNGAEVDIT 51
Query: 69 SADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRF 128
V+ + T + D + H AAQ++ S+ E N+ GT ++ EA + +
Sbjct: 52 DWCSVYDSIATFRPDAVFHLAAQSYPAVSWARPVETLTTNMVGTAIVFEALRRVRPHAKI 111
Query: 129 IHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGN 188
I + YG D V N E +L P +PY +KA +ML Y +SYG+ + R
Sbjct: 112 IVAGSSAEYGFVDPSEVPIN-ERRELRPLHPYGVSKAATDMLAYQYHKSYGMHTVVARIF 170
Query: 189 NVYGPNQFPEKL---IPKFILLAMKGKPLPIH-GDGSNVRSYLYCEDVAEAFDTILHKGE 244
N GP + + L + + L + I G+ R+ + D+ A +L KGE
Sbjct: 171 NCTGPRKVGDALSDFVRRCTWLEHHPEQSAIRVGNLKTKRTIVDVRDLNRALMLMLDKGE 230
Query: 245 VGHVYNIGTKKERRVIDVATDI---CKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQL 301
G YN+G + DV + CK + P+ + RP +++ + D KL +
Sbjct: 231 AGADYNVGGSIAYEMGDVLKQVIAACKRDDIVPEVDPALL--RPTDEKIIYGDCSKLAAI 288
Query: 302 -GWYERV 307
GW + +
Sbjct: 289 TGWQQEI 295
>UNIPROTKB|Q0BYW6 [details] [associations]
symbol:HNE_2639 "UDP-glucuronate 5'-epimerase"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0050379
"UDP-glucuronate 5'-epimerase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009103 EMBL:CP000158 GenomeReviews:CP000158_GR
HOGENOM:HOG000168000 KO:K08679 GO:GO:0050379 RefSeq:YP_761327.1
ProteinModelPortal:Q0BYW6 STRING:Q0BYW6 GeneID:4289771
KEGG:hne:HNE_2639 PATRIC:32218139 OMA:NSAYSAN
BioCyc:HNEP228405:GI69-2655-MONOMER Uniprot:Q0BYW6
Length = 334
Score = 233 (87.1 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 81/332 (24%), Positives = 146/332 (43%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD--YCSNLKNLNPSRLSP--NFKFIKG 65
IL+TGAAGFI S + RL+ + + +D Y LK +RL+ +F+ +
Sbjct: 3 ILVTGAAGFIGSEMALRLLKE--GHSVTGVDCFTPYYDPQLKEDRAARLTAFDDFRLERI 60
Query: 66 DVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQI 125
+ ++ + + + + ++HFAAQ V S + +F NI G+ +++ + G
Sbjct: 61 RIEDSEAMEAVFQRDTPEMVLHFAAQAGVRYSLDHPRDFIDANIVGSFNIIDLSRRHGT- 119
Query: 126 KRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 185
+ + ST YG + A P Y+ATK +E++ ++ YG+P
Sbjct: 120 QHLVMASTSSAYGANQKFPFEERDSAPY--PLTIYAATKLASELIAHSHAHLYGVPTTVL 177
Query: 186 RGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEV 245
R +VYGP P+ F KG+P+ + G +R + Y +D+ EA ++ V
Sbjct: 178 RFFSVYGPWGRPDMAFFLFTDKIFKGQPIDVFNHGDLLRDFTYIDDLVEAIRRLMDTPPV 237
Query: 246 --GHV-----------Y---NIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQ 289
H+ Y NIG R++D I ++ + ++ +P + +
Sbjct: 238 VGNHIIRGDSLSPVAPYRLVNIGNASPVRLMDYIEAIEG--AIGRKAEKNMIDMQPGDVK 295
Query: 290 RYFLDVQKLKQLGWYERVT-WEEGLQKTMKWY 320
+ F DV+ L L Y T + G+ + + WY
Sbjct: 296 QTFADVRLLDALTGYTPDTDYRTGIARFVDWY 327
>TAIR|locus:2126846 [details] [associations]
symbol:GAE3 "UDP-D-glucuronate 4-epimerase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0016020 "membrane" evidence=TAS] [GO:0050378
"UDP-glucuronate 4-epimerase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016020 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975
GO:GO:0032580 GO:GO:0044237 EMBL:AL161471 EMBL:AF069299
HOGENOM:HOG000168000 KO:K08679 ProtClustDB:CLSN2679288
GO:GO:0050378 EMBL:BT026487 IPI:IPI00527699 PIR:T01339
RefSeq:NP_191922.1 UniGene:At.27610 HSSP:Q14376
ProteinModelPortal:O81312 SMR:O81312 STRING:O81312 PaxDb:O81312
PRIDE:O81312 EnsemblPlants:AT4G00110.1 GeneID:828145
KEGG:ath:AT4G00110 TAIR:At4g00110 InParanoid:O81312 OMA:KWWSRVL
PhylomeDB:O81312 Genevestigator:O81312 Uniprot:O81312
Length = 430
Score = 237 (88.5 bits), Expect = 6.5e-17, P = 6.5e-17
Identities = 88/333 (26%), Positives = 138/333 (41%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD--YCSNLKNLNPSRLSPNFKFI-KG 65
++L+TGAAGF+ +HV L ++ LD + Y +LK + L + F+ +G
Sbjct: 92 SVLVTGAAGFVGTHVSAALKRRGDG--VLGLDNFNDYYDPSLKRARQALLERSGVFVVEG 149
Query: 66 DVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQI 125
D+ A L+ + +MH AAQ V + N + +NI G LLE CK
Sbjct: 150 DINDAALLKKLFEVVPFTHVMHLAAQAGVRYAMENPSSYVHSNIAGFVNLLEVCKSANPQ 209
Query: 126 KRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 185
+ S+ VYG + Q P + Y+ATK E + Y YGL +
Sbjct: 210 PAIVWASSSSVYGLNTKVPFSEKDRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSLTGL 267
Query: 186 RGNNVYGPNQFPEKLIPKFILLAMKGKPLPIH---GDGSNVRSYLYCEDVAE----AFDT 238
R VYGP P+ F +KGK + I G+ R + Y +D+ + A DT
Sbjct: 268 RFFTVYGPWGRPDMAYFFFTRDILKGKAISIFEGVNHGTVARDFTYIDDIVKGCLGALDT 327
Query: 239 ILHK-GEVG--------HVYNIGTKKERRVIDVATDICKLFSLNPDTQI-KFVENRPFND 288
G G V+N+G V D+ T + +L + I K N
Sbjct: 328 AEKSTGSGGKKRGAAQLRVFNLGNTSPVPVTDLVTILERLLKVKAKRNIMKLPRNGDVQF 387
Query: 289 QRYFLDVQKLKQLGWYERVTWEEGLQKTMKWYI 321
+ + ++LG+ + GL+K +WY+
Sbjct: 388 THANISSAQ-RELGYKPTTDLQTGLKKFARWYL 419
>TIGR_CMR|CJE_1273 [details] [associations]
symbol:CJE_1273 "UDP-glucose 4-epimerase" species:195099
"Campylobacter jejuni RM1221" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0044237
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 RefSeq:YP_179261.1
ProteinModelPortal:Q5HTX4 STRING:Q5HTX4 GeneID:3231780
KEGG:cjr:CJE1273 PATRIC:20044342 OMA:MMSERIL ProtClustDB:CLSK879103
BioCyc:CJEJ195099:GJC0-1299-MONOMER Uniprot:Q5HTX4
Length = 328
Score = 227 (85.0 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 90/315 (28%), Positives = 141/315 (44%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
ILI+G AG+I SH + + +++I VLD L S + + ++ FKF + D++
Sbjct: 3 ILISGGAGYIGSHTLRQFLKT--DHEICVLDNLSKGSKIAIEDLQKIRA-FKFFEQDLSD 59
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFI 129
V + EK D I+HFAA V S N ++ NN T L+E C TG + +FI
Sbjct: 60 FQGVKALFEREKFDAIVHFAASIEVFESMQNPLKYYMNNTVNTTNLIETCLQTG-VNKFI 118
Query: 130 HVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKA-GAEMLVMAYGRSYGLPVITTRGN 188
ST YGE V E S L P NPY +K E+L A + R
Sbjct: 119 FSSTAATYGEPQTPVV---SETSPLAPINPYGRSKLMSEEVLRDASMANPEFKHCILRYF 175
Query: 189 NVYGP-------NQFPEK-LIPKFILLAMKGK--PLPIHGD------GSNVRSYLYCEDV 232
NV G ++P+ L+ K GK L I GD G+ +R +++ +D+
Sbjct: 176 NVAGACMDYTLGQRYPKATLLIKVAAECAAGKRDKLFIFGDDYDTKDGTCIRDFIHVDDI 235
Query: 233 AEA-FDTI--LHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQ 289
+ A T+ L + E +V+N+G V +V + K+ + D +++ R +
Sbjct: 236 SSAHLATLDYLQENE-SNVFNVGYGHGFSVKEVIEAMKKVSGV--DFKVELAPRRAGDPS 292
Query: 290 RYFLDVQKLKQL-GW 303
D K++ L W
Sbjct: 293 VLISDASKIRNLTSW 307
>TAIR|locus:2050921 [details] [associations]
symbol:GAE4 "UDP-D-glucuronate 4-epimerase 4"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370
PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 GO:GO:0032580
GO:GO:0044237 EMBL:AC002387 HOGENOM:HOG000168000 KO:K08679
ProtClustDB:CLSN2679288 GO:GO:0050378 HSSP:Q14376 EMBL:AY594693
EMBL:BT005652 EMBL:BT004225 IPI:IPI00535089 PIR:A84889
RefSeq:NP_182056.1 UniGene:At.66419 ProteinModelPortal:O22141
SMR:O22141 STRING:O22141 PaxDb:O22141 PRIDE:O22141
EnsemblPlants:AT2G45310.1 GeneID:819139 KEGG:ath:AT2G45310
TAIR:At2g45310 InParanoid:O22141 OMA:IFESANH PhylomeDB:O22141
BioCyc:MetaCyc:AT2G45310-MONOMER Genevestigator:O22141
Uniprot:O22141
Length = 437
Score = 233 (87.1 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 87/333 (26%), Positives = 139/333 (41%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD--YCSNLKNLNPSRLSPNFKFI-KGD 66
+L+TGAAGF+ +HV L ++ LD + Y +LK + L + FI +GD
Sbjct: 99 VLVTGAAGFVGTHVSAALKRRGDG--VIGLDNFNDYYDPSLKRARRALLERSGIFIVEGD 156
Query: 67 VASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIK 126
+ +L+ + +MH AAQ V + N + +NI G LLE CK
Sbjct: 157 INDVELLRKLFKIVSFTHVMHLAAQAGVRYAMENPSSYVHSNIAGFVNLLEICKSVNPQP 216
Query: 127 RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 186
+ S+ VYG + + Q P + Y+ATK E + Y YGL + R
Sbjct: 217 AIVWASSSSVYGLNTKVPFSEKDKTDQ--PASLYAATKKAGEEIAHTYNHIYGLSLTGLR 274
Query: 187 GNNVYGPNQFPEKLIPKFILLAMKGKPLPIH---GDGSNVRSYLYCEDVAE----AFDTI 239
VYGP P+ F +KGK + I G+ R + Y +D+ + A DT
Sbjct: 275 FFTVYGPWGRPDMAYFFFTKDILKGKSISIFESANHGTVARDFTYIDDIVKGCLAALDTA 334
Query: 240 LHK-GEVG--------HVYNIGTKKERRVIDVATDICKLFSLNPDTQ-IKFVENRPFNDQ 289
G G V+N+G V D+ + + + IK N
Sbjct: 335 EKSTGSGGKKRGPAQLRVFNLGNTSPVPVSDLVRILERQLKVKAKKNLIKMPRNGDVPFT 394
Query: 290 RYFLDVQKLKQLGWYERVTWEEGLQKTMKWYIS 322
+ + + ++LG+ + GL+K ++WY+S
Sbjct: 395 HANISLAQ-RELGYKPTTDLQTGLKKFVRWYLS 426
>TAIR|locus:2139134 [details] [associations]
symbol:GAE5 "UDP-D-glucuronate 4-epimerase 5"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] [GO:0016036 "cellular response to phosphate
starvation" evidence=RCA] [GO:0019375 "galactolipid biosynthetic
process" evidence=RCA] [GO:0042631 "cellular response to water
deprivation" evidence=RCA] [GO:0005768 "endosome" evidence=IDA]
[GO:0005802 "trans-Golgi network" evidence=IDA] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AL161533 EMBL:AL080318 HOGENOM:HOG000168000
KO:K08679 ProtClustDB:CLSN2679288 GO:GO:0050378 HSSP:Q14376
EMBL:AY050993 EMBL:AY150403 IPI:IPI00529597 PIR:T48135
RefSeq:NP_192962.1 UniGene:At.48849 UniGene:At.66589
ProteinModelPortal:Q9STI6 SMR:Q9STI6 STRING:Q9STI6 PRIDE:Q9STI6
EnsemblPlants:AT4G12250.1 GeneID:826833 KEGG:ath:AT4G12250
TAIR:At4g12250 InParanoid:Q9STI6 OMA:RAYRQQM PhylomeDB:Q9STI6
Genevestigator:Q9STI6 Uniprot:Q9STI6
Length = 436
Score = 227 (85.0 bits), Expect = 9.2e-16, P = 9.2e-16
Identities = 92/334 (27%), Positives = 136/334 (40%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD--YCSNLKNLNPSRLSPNFKFI-KGD 66
+L+TGA+GF+ +HV L ++ LD + Y LK L + F+ +GD
Sbjct: 98 VLVTGASGFVGTHVSIALRRRGDG--VLGLDNFNRYYDPKLKRARQGLLERSGVFVVEGD 155
Query: 67 VASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIK 126
+ A L+ + +MH AAQ V + N + +NI G LLE K
Sbjct: 156 INDAVLLRKLFDVVLFTHVMHLAAQAGVRYAMQNPGSYVNSNIAGFVNLLEVSKSANPQP 215
Query: 127 RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 186
+ S+ VYG + Q P + Y+ATK E + Y YGL + R
Sbjct: 216 AIVWASSSSVYGLNSKVPFSEKDRTDQ--PASLYAATKKAGEGIAHTYNHIYGLSLTGLR 273
Query: 187 GNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGD---GSNVRSYLYCEDVAE----AFDTI 239
VYGP P+ F +KGK + + GS R + Y +D+ + A DT
Sbjct: 274 FFTVYGPWGRPDMAYFFFTKDILKGKTITVFESPDKGSVARDFTYIDDIVKGCLGALDTA 333
Query: 240 LHK-GEVG--------HVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQR 290
G G +YN+G V + T + KL + +I + P N
Sbjct: 334 EKSTGSGGKKKGPAMFRIYNLGNTSPVPVTKLVTILEKLLKMKAKKKIMPL---PRNGDV 390
Query: 291 YFLDVQ-KLKQ--LGWYERVTWEEGLQKTMKWYI 321
F L Q LG+ V E GL+K +KWY+
Sbjct: 391 EFTHANITLAQAELGYKPAVDLETGLKKFVKWYM 424
>TAIR|locus:2025472 [details] [associations]
symbol:GAE2 "UDP-D-glucuronate 4-epimerase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370
PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 GO:GO:0032580
GO:GO:0044237 EMBL:AC020622 HOGENOM:HOG000168000 KO:K08679
ProtClustDB:CLSN2679288 GO:GO:0050378 EMBL:AF334734 EMBL:AY084754
EMBL:AK228396 IPI:IPI00543208 PIR:A86152 RefSeq:NP_171702.1
UniGene:At.17005 ProteinModelPortal:Q9LPC1 SMR:Q9LPC1 STRING:Q9LPC1
PaxDb:Q9LPC1 PRIDE:Q9LPC1 EnsemblPlants:AT1G02000.1 GeneID:839289
KEGG:ath:AT1G02000 TAIR:At1g02000 InParanoid:Q9LPC1 OMA:LFKFVDA
PhylomeDB:Q9LPC1 Genevestigator:Q9LPC1 Uniprot:Q9LPC1
Length = 434
Score = 226 (84.6 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 86/334 (25%), Positives = 140/334 (41%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD--YCSNLKNLNPSRLSPNFKFI-KG 65
++L+TGAAGF+ +HV L ++ LD + Y ++LK + L + FI +G
Sbjct: 93 SVLVTGAAGFVGTHVSAALKRRGDG--VLGLDNFNDYYDTSLKRSRQALLERSGVFIVEG 150
Query: 66 DVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQI 125
D+ L+ + +MH AAQ V + N + +NI G LLE CK
Sbjct: 151 DINDLSLLKKLFEVVPFTHVMHLAAQAGVRYAMENPGSYVHSNIAGFVNLLEVCKSANPQ 210
Query: 126 KRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 185
+ S+ VYG + Q P + Y+ATK E + Y YGL +
Sbjct: 211 PAIVWASSSSVYGLNTKVPFSEKDRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSLTGL 268
Query: 186 RGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSN----VRSYLYCEDVAE----AFD 237
R VYGP P+ F +KGK + I +G+N R + Y +D+ + A D
Sbjct: 269 RFFTVYGPWGRPDMAYFFFTRDILKGKAISIF-EGANHGTVARDFTYIDDIVKGCLGALD 327
Query: 238 TILHK-GEVG--------HVYNIGTKKERRVIDVATDICKLFSLNPD-TQIKFVENRPFN 287
T G G V+N+G V D+ + + +L + +K N
Sbjct: 328 TAEKSTGSGGKKRGAAQLRVFNLGNTSPVPVTDLVSILERLLKVKAKRNMMKLPRNGDVP 387
Query: 288 DQRYFLDVQKLKQLGWYERVTWEEGLQKTMKWYI 321
+ + ++ G+ + GL+K ++WY+
Sbjct: 388 FTHANISSAQ-REFGYKPSTDLQTGLKKFVRWYL 420
>UNIPROTKB|P09147 [details] [associations]
symbol:galE species:83333 "Escherichia coli K-12"
[GO:0006012 "galactose metabolic process" evidence=IDA;IMP]
[GO:0005975 "carbohydrate metabolic process" evidence=IMP]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0070403 "NAD+ binding" evidence=IDA] [GO:0033499
"galactose catabolic process via UDP-galactose" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA;IDA] [GO:0009242 "colanic acid
biosynthetic process" evidence=IEP;IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 Gene3D:3.40.50.720 GO:GO:0070403
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 GO:GO:0009242
GO:GO:0033499 EMBL:X06226 OMA:THAPIDA EMBL:X51449 EMBL:U07867
EMBL:J01613 PIR:S02089 RefSeq:NP_415280.3 RefSeq:YP_489032.1
PDB:1A9Y PDB:1A9Z PDB:1KVQ PDB:1KVR PDB:1KVS PDB:1KVT PDB:1KVU
PDB:1LRJ PDB:1LRK PDB:1LRL PDB:1NAH PDB:1NAI PDB:1UDA PDB:1UDB
PDB:1UDC PDB:1XEL PDB:2UDP PDBsum:1A9Y PDBsum:1A9Z PDBsum:1KVQ
PDBsum:1KVR PDBsum:1KVS PDBsum:1KVT PDBsum:1KVU PDBsum:1LRJ
PDBsum:1LRK PDBsum:1LRL PDBsum:1NAH PDBsum:1NAI PDBsum:1UDA
PDBsum:1UDB PDBsum:1UDC PDBsum:1XEL PDBsum:2UDP
ProteinModelPortal:P09147 SMR:P09147 DIP:DIP-9728N IntAct:P09147
SWISS-2DPAGE:P09147 PRIDE:P09147 EnsemblBacteria:EBESCT00000004431
EnsemblBacteria:EBESCT00000004432 EnsemblBacteria:EBESCT00000004433
EnsemblBacteria:EBESCT00000014770 GeneID:12932906 GeneID:945354
KEGG:ecj:Y75_p0732 KEGG:eco:b0759 PATRIC:32116719 EchoBASE:EB0357
EcoGene:EG10362 ProtClustDB:PRK10675
BioCyc:EcoCyc:UDPGLUCEPIM-MONOMER BioCyc:ECOL316407:JW0742-MONOMER
BioCyc:MetaCyc:UDPGLUCEPIM-MONOMER SABIO-RK:P09147
EvolutionaryTrace:P09147 Genevestigator:P09147 Uniprot:P09147
Length = 338
Score = 219 (82.2 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 71/254 (27%), Positives = 119/254 (46%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP--SRLSPNFK-FIKGD 66
+L+TG +G+I SH C +L+ N + +++LD L C++ +++ P RL F++GD
Sbjct: 3 VLVTGGSGYIGSHTCVQLLQN--GHDVIILDNL--CNSKRSVLPVIERLGGKHPTFVEGD 58
Query: 67 VASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIK 126
+ + L+ IL IDT++HFA V S E+ NN+ GT L+ A + +K
Sbjct: 59 IRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMR-AANVK 117
Query: 127 RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS--------- 177
FI S+ VYG+ + V + P +PY +K E ++ ++
Sbjct: 118 NFIFSSSATVYGDQPKIPYVESFPTGT--PQSPYGKSKLMVEQILTDLQKAQPDWSIALL 175
Query: 178 -YGLPV-ITTRGNNVYGPNQFPEKLIPKFILLAM-KGKPLPIHG------DGSNVRSYLY 228
Y PV G+ P P L+P +A+ + L I G DG+ VR Y++
Sbjct: 176 RYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIH 235
Query: 229 CEDVAEAFDTILHK 242
D+A+ + K
Sbjct: 236 VMDLADGHVVAMEK 249
Score = 118 (46.6 bits), Expect = 0.00064, P = 0.00064
Identities = 36/128 (28%), Positives = 56/128 (43%)
Query: 207 LAMKGKPLPIHGDGSNVRSYLYCEDVAE----AFDTILHKGEVGHVYNIGTKKERRVIDV 262
LA+ G P DG+ VR Y++ D+A+ A + + +K V H+YN+G V+DV
Sbjct: 215 LAIFGNDYPTE-DGTGVRDYIHVMDLADGHVVAMEKLANKPGV-HIYNLGAGVGNSVLDV 272
Query: 263 ATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKL-KQLGWYERVTWEEGLQKTMKWYI 321
K + F R + Y+ D K ++L W T +E Q T W
Sbjct: 273 VNAFSK--ACGKPVNYHFAPRREGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQS 330
Query: 322 SNPDWWGD 329
+P + D
Sbjct: 331 RHPQGYPD 338
>TIGR_CMR|CHY_0545 [details] [associations]
symbol:CHY_0545 "UDP-glucose 4-epimerase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:YP_359403.1 ProteinModelPortal:Q3AEN1 SMR:Q3AEN1
STRING:Q3AEN1 GeneID:3728483 KEGG:chy:CHY_0545 PATRIC:21274237
OMA:DTEDGSC BioCyc:CHYD246194:GJCN-546-MONOMER Uniprot:Q3AEN1
Length = 327
Score = 216 (81.1 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 87/336 (25%), Positives = 154/336 (45%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
IL+TG AG+I SH+ +L K++V+D NL + + K I GD
Sbjct: 2 ILVTGGAGYIGSHIVRQLC--LKNEKVLVVD------NLSKGHKKAVDTRAKLIVGDFGD 53
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFI 129
+L+ I I ++H AAQ+ V S ++ + NI T LL+ + +K+ +
Sbjct: 54 ENLLLEIFKKYDIKAVIHMAAQSLVGESMSQPEKYFEENISKTLSLLKVM-LKANVKKMV 112
Query: 130 HVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNN 189
ST VYGE ++ + + PTN Y +K E + Y + +G ++ R N
Sbjct: 113 FSSTAAVYGEPEKWPITEDFPQK---PTNVYGYSKLVIEQCLEWYRQIHGFNYVSLRYFN 169
Query: 190 VYG--PN------QFPEK-LIPK-FILLAMKGKPLPIHG------DGSNVRSYLYCEDVA 233
G P+ PE LIP F ++ + + L + G DG+ +R Y++ D+A
Sbjct: 170 AAGADPSGDIGEDHNPETHLIPLIFKVILGEQEELTVFGTDYPTPDGTCIRDYIHVNDLA 229
Query: 234 EAFDTILHK---GEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQR 290
EA L+K E G VYN+G +K V ++ ++ + ++++ + RP +
Sbjct: 230 EAHILALNKLNKDESG-VYNLGNQKGFSVKEIIKVAEEVTGVK--VKVRYGQRRPGDPAV 286
Query: 291 YFLDVQKL-KQLGWYERV-TWEEGLQKTMKWYISNP 324
+K+ K+L + + + +Q +W+ +NP
Sbjct: 287 LVASSEKIQKELNFTPKFGDIKTIVQTAWEWHKNNP 322
>TAIR|locus:2076066 [details] [associations]
symbol:GAE6 "UDP-D-glucuronate 4-epimerase 6"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006569 "tryptophan catabolic process" evidence=RCA]
[GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA]
[GO:0005768 "endosome" evidence=IDA] [GO:0005802 "trans-Golgi
network" evidence=IDA] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005794 EMBL:CP002686 GenomeReviews:BA000014_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AP001297 HSSP:P04397 HOGENOM:HOG000168000
KO:K08679 ProtClustDB:CLSN2679288 GO:GO:0050378 EMBL:AJ879893
EMBL:AF083691 EMBL:AF370210 EMBL:AY056117 EMBL:AY062625
EMBL:AY133771 IPI:IPI00538638 RefSeq:NP_189024.1 UniGene:At.24934
UniGene:At.67131 UniGene:At.71799 ProteinModelPortal:Q9LIS3
SMR:Q9LIS3 IntAct:Q9LIS3 STRING:Q9LIS3 PaxDb:Q9LIS3 PRIDE:Q9LIS3
EnsemblPlants:AT3G23820.1 GeneID:821965 KEGG:ath:AT3G23820
TAIR:At3g23820 InParanoid:Q9LIS3 OMA:NTAMPFS PhylomeDB:Q9LIS3
BRENDA:5.1.3.6 Genevestigator:Q9LIS3 Uniprot:Q9LIS3
Length = 460
Score = 222 (83.2 bits), Expect = 3.9e-15, P = 3.9e-15
Identities = 91/335 (27%), Positives = 134/335 (40%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD--YCSNLKNLNPSRLSPNFKFI-KG 65
++L+TGAAGF+ SH C+ + + ++ D + Y +LK L FI +G
Sbjct: 113 SVLVTGAAGFVGSH-CSLALRKRGD-GVLGFDNFNDYYDPSLKRARQELLEKQQVFIVEG 170
Query: 66 DVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQI 125
D+ L+ + I+H AAQ V + N + +NI G LLE K
Sbjct: 171 DLNDGPLLRKLFDVVPFTHILHLAAQAGVRYAMKNPQSYIASNIAGFVNLLEVAKAANPQ 230
Query: 126 KRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 185
+ S+ VYG E+ H Q P + Y+ATK E + Y YGL +
Sbjct: 231 PAIVWASSSSVYGLNTENPFSEEHRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSLTGL 288
Query: 186 RGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSN---VRSYLYCEDVAE----AFDT 238
R VYGP P+ F + GK + I+ N R + Y +D+ + A DT
Sbjct: 289 RFFTVYGPWGRPDMAYFFFTKDILHGKSIDIYRTQDNQEVARDFTYIDDIVKGCVGALDT 348
Query: 239 ILHK-GEVG--------HVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFN-D 288
G G VYN+G + V + L L K + P N D
Sbjct: 349 AEKSTGSGGKKRGQAQLRVYNLGNTSP---VPVGRLVSILEGLLGTKAKKHLIKMPRNGD 405
Query: 289 QRY-FLDVQ-KLKQLGWYERVTWEEGLQKTMKWYI 321
Y +V K G+ GL+K +KWY+
Sbjct: 406 VPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYV 440
>FB|FBgn0035147 [details] [associations]
symbol:Gale "UDP-galactose 4'-epimerase" species:7227
"Drosophila melanogaster" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS;IMP;NAS] [GO:0006012 "galactose metabolic
process" evidence=IMP;NAS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
UniPathway:UPA00214 InterPro:IPR016040 EMBL:AE014296 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GeneTree:ENSGT00530000063128 OMA:ADKAWNA EMBL:AY058582
RefSeq:NP_001246537.1 RefSeq:NP_612044.1 UniGene:Dm.4155
ProteinModelPortal:Q9W0P5 SMR:Q9W0P5 DIP:DIP-20343N IntAct:Q9W0P5
MINT:MINT-914196 STRING:Q9W0P5 PaxDb:Q9W0P5 PRIDE:Q9W0P5
EnsemblMetazoa:FBtr0072556 EnsemblMetazoa:FBtr0306917 GeneID:38076
KEGG:dme:Dmel_CG12030 UCSC:CG12030-RA CTD:2582 FlyBase:FBgn0035147
InParanoid:Q9W0P5 OrthoDB:EOG473N6Z PhylomeDB:Q9W0P5
GenomeRNAi:38076 NextBio:806870 Bgee:Q9W0P5 GermOnline:CG12030
Uniprot:Q9W0P5
Length = 350
Score = 215 (80.7 bits), Expect = 4.8e-15, Sum P(2) = 4.8e-15
Identities = 76/261 (29%), Positives = 117/261 (44%)
Query: 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKL--DYCSNLKNLNP-SRLSP----N 59
P +L+TG AG+I SH ++ Y ++ +D L Y S K SR+
Sbjct: 3 PPTVLVTGGAGYIGSHTVLEMLN--AGYNVICVDNLCNAYSSGAKLPEALSRVQEITGKK 60
Query: 60 FKFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEAC 119
F + D+ + V + KID + HFAA V S ++ NN+ GT+VLLEA
Sbjct: 61 VNFYRVDITDREQVRSVFQEHKIDMVAHFAALKAVGESCRIPLQYYHNNMTGTNVLLEAM 120
Query: 120 KITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS-Y 178
+ +F++ S+ VYGE V H T+PY TK E ++ +S
Sbjct: 121 A-DNNVFKFVYSSSATVYGEPKFLPVTEEHPTGNC--TSPYGKTKYFTEEILKDLCKSDK 177
Query: 179 GLPVITTR-----GNNVYG-----PNQFPEKLIPKFILLAMKGKP-LPIHG------DGS 221
V++ R G ++ G PN P L+P +A+ +P L ++G DG+
Sbjct: 178 RWAVVSLRYFNPVGAHISGRIGEDPNGEPNNLMPYIAQVAVGRRPSLSVYGSDFPTHDGT 237
Query: 222 NVRSYLYCEDVAEAFDTILHK 242
VR Y++ D+AE L K
Sbjct: 238 GVRDYIHIVDLAEGHVKALDK 258
Score = 42 (19.8 bits), Expect = 4.8e-15, Sum P(2) = 4.8e-15
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 585 RNLSGIWNFT-NPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVA 632
RN++ F N G +L+M KA+ K N+TL ++ VA
Sbjct: 260 RNIAETGFFAYNLGTGVGYSVLDMVKAFEKASGKKVNYTLVDRRSGDVA 308
>UNIPROTKB|Q9KLH0 [details] [associations]
symbol:VC_A0774 "UDP-glucose 4-epimerase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISS] [GO:0006012
"galactose metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:P09147 PIR:F82419
RefSeq:NP_233160.1 ProteinModelPortal:Q9KLH0 SMR:Q9KLH0
DNASU:2612322 GeneID:2612322 KEGG:vch:VCA0774 PATRIC:20086102
OMA:NIDIRNK ProtClustDB:CLSK869762 Uniprot:Q9KLH0
Length = 338
Score = 216 (81.1 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 88/348 (25%), Positives = 148/348 (42%)
Query: 10 ILITGAAGFIASHVCNRLI--GNYPEYKIVVLDKLDYCSNLKNLNPSR--LSPNFKFIKG 65
+L+TG G+I SH C ++I G P V+LD L Y S + L+ + +F++G
Sbjct: 3 VLVTGGMGYIGSHTCIQMIQAGMTP----VILDNL-YNSKVTVLDRIEKVIGVRPQFVQG 57
Query: 66 DVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQI 125
D+ L+ ++ I+ ++HFA V S E+ NN+ GT VL+ A + G +
Sbjct: 58 DIRDKALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAG-V 116
Query: 126 KRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPV 182
K + S+ VYGE + E+ NPY +K E + + ++ + + +
Sbjct: 117 KSLVFSSSATVYGEPTSVPIT---ESFPTKAANPYGRSKLMVEECLTDFQKANPDWSITL 173
Query: 183 I---TTRGNNVYG-----PNQFPEKLIPKFILLAMKGKP--LPIHG------DGSNVRSY 226
+ G++ G P P L+P F+ G+ L + G DG+ VR Y
Sbjct: 174 LRYFNPVGSHPSGELGEDPQGIPNNLMP-FVTQVAVGRREYLSVFGSDYPTKDGTGVRDY 232
Query: 227 LYCEDVAEAFDTILHKGEVGHVYNIGTKKERRVIDVAT-------DICKLFSLNPDTQI- 278
++ D+A+ G + + +GT + ++ T D+ K F +
Sbjct: 233 IHVMDLAD--------GHIAALKKVGTCAGLHIYNLGTGKGYSVLDVVKAFETASGRTVP 284
Query: 279 -KFVENRPFNDQRYFLDVQKLKQ-LGWYERVTWEEGLQKTMKWYISNP 324
K V+ RP + Y+ D K Q LGW Q W +NP
Sbjct: 285 YKLVDRRPGDIAEYWADPTKAAQDLGWKATRNLHTMAQDAWCWQSNNP 332
>TIGR_CMR|VC_A0774 [details] [associations]
symbol:VC_A0774 "UDP-glucose 4-epimerase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:P09147 PIR:F82419
RefSeq:NP_233160.1 ProteinModelPortal:Q9KLH0 SMR:Q9KLH0
DNASU:2612322 GeneID:2612322 KEGG:vch:VCA0774 PATRIC:20086102
OMA:NIDIRNK ProtClustDB:CLSK869762 Uniprot:Q9KLH0
Length = 338
Score = 216 (81.1 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 88/348 (25%), Positives = 148/348 (42%)
Query: 10 ILITGAAGFIASHVCNRLI--GNYPEYKIVVLDKLDYCSNLKNLNPSR--LSPNFKFIKG 65
+L+TG G+I SH C ++I G P V+LD L Y S + L+ + +F++G
Sbjct: 3 VLVTGGMGYIGSHTCIQMIQAGMTP----VILDNL-YNSKVTVLDRIEKVIGVRPQFVQG 57
Query: 66 DVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQI 125
D+ L+ ++ I+ ++HFA V S E+ NN+ GT VL+ A + G +
Sbjct: 58 DIRDKALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAG-V 116
Query: 126 KRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPV 182
K + S+ VYGE + E+ NPY +K E + + ++ + + +
Sbjct: 117 KSLVFSSSATVYGEPTSVPIT---ESFPTKAANPYGRSKLMVEECLTDFQKANPDWSITL 173
Query: 183 I---TTRGNNVYG-----PNQFPEKLIPKFILLAMKGKP--LPIHG------DGSNVRSY 226
+ G++ G P P L+P F+ G+ L + G DG+ VR Y
Sbjct: 174 LRYFNPVGSHPSGELGEDPQGIPNNLMP-FVTQVAVGRREYLSVFGSDYPTKDGTGVRDY 232
Query: 227 LYCEDVAEAFDTILHKGEVGHVYNIGTKKERRVIDVAT-------DICKLFSLNPDTQI- 278
++ D+A+ G + + +GT + ++ T D+ K F +
Sbjct: 233 IHVMDLAD--------GHIAALKKVGTCAGLHIYNLGTGKGYSVLDVVKAFETASGRTVP 284
Query: 279 -KFVENRPFNDQRYFLDVQKLKQ-LGWYERVTWEEGLQKTMKWYISNP 324
K V+ RP + Y+ D K Q LGW Q W +NP
Sbjct: 285 YKLVDRRPGDIAEYWADPTKAAQDLGWKATRNLHTMAQDAWCWQSNNP 332
>TIGR_CMR|CJE_1611 [details] [associations]
symbol:CJE_1611 "GDP-mannose 4,6-dehydratase"
species:195099 "Campylobacter jejuni RM1221" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0044237 KO:K01711 GO:GO:0008446
HOGENOM:HOG000167992 RefSeq:YP_179592.1 ProteinModelPortal:Q5HSZ3
STRING:Q5HSZ3 GeneID:3232239 KEGG:cjr:CJE1611 PATRIC:20045019
OMA:RISIFYA ProtClustDB:CLSK931088
BioCyc:CJEJ195099:GJC0-1641-MONOMER Uniprot:Q5HSZ3
Length = 343
Score = 215 (80.7 bits), Expect = 7.1e-15, P = 7.1e-15
Identities = 83/316 (26%), Positives = 143/316 (45%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKL-DYCSNLKNLNPSRLSPN--FKFIK 64
K LITG G + S + + L+ N +Y+++ + + + N+ +L+ R++
Sbjct: 3 KTALITGFTGQVGSQMADFLLAN-TDYEVIGMMRWQEPMDNIYHLS-DRINKKDRISIFY 60
Query: 65 GDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQ 124
D+ + + +++ D I H AAQ++ SF E + NI GT +LE +I
Sbjct: 61 ADLNDYSSLQKLFESQRPDVIFHLAAQSYPKTSFDIPIETLQTNIIGTANILENIRILKA 120
Query: 125 IKRF---IHV-STDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 180
+ +HV S+ EVYG + +E + +PYS +K G + L YG +Y +
Sbjct: 121 KDGYDPVVHVCSSSEVYGRAKVGIKL--NEDTTFHGASPYSISKIGTDYLGRFYGEAYNI 178
Query: 181 PVITTRGNNVYGPNQ---FPEKLIPKFILLAMKGKPLPIH--GDGSNVRSYLYCEDVAEA 235
TR GP + F E + K I L G P+ G+ S+VR++ D A
Sbjct: 179 RTFVTRMGTHSGPRRSDVFFESTVAKQIALIETGYQEPVIKVGNLSSVRTFQDARDAIRA 238
Query: 236 FDTIL---HKGEV--GHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENR--PFND 288
+ + KG+V G +NI ++ ++ +V +I FS D +I+ E R P +
Sbjct: 239 YYLLSLESQKGKVPCGEAFNIAGEEAFKLPEVI-EILLSFSTRKDIKIEQDEERLRPIDA 297
Query: 289 QRYFLDVQKLKQ-LGW 303
D K+K + W
Sbjct: 298 DYQMFDNTKIKSFINW 313
>POMBASE|SPBPB2B2.12c [details] [associations]
symbol:gal10 species:4896 "Schizosaccharomyces pombe"
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IDA]
[GO:0004034 "aldose 1-epimerase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0030246 "carbohydrate binding" evidence=IEA] [GO:0033499
"galactose catabolic process via UDP-galactose" evidence=ISS]
[GO:0033554 "cellular response to stress" evidence=IEP] [GO:0042125
"protein galactosylation" evidence=IMP] [GO:0050662 "coenzyme
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 UniPathway:UPA00214 UniPathway:UPA00242
InterPro:IPR016040 PomBase:SPBPB2B2.12c GO:GO:0005829 GO:GO:0005634
GO:GO:0033554 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0030246 EMBL:CU329671 GenomeReviews:CU329671_GR
SUPFAM:SSF74650 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Gene3D:2.70.98.10 RefSeq:NP_596858.1 ProteinModelPortal:Q9HDU3
STRING:Q9HDU3 EnsemblFungi:SPBPB2B2.12c.1 GeneID:2541411
KEGG:spo:SPBPB2B2.12c eggNOG:COG2017 HOGENOM:HOG000247896 KO:K15917
OMA:CKDLWKW OrthoDB:EOG4NKG3T BRENDA:5.1.3.2 NextBio:20802517
GO:GO:0004034 GO:GO:0033499 GO:GO:0042125 InterPro:IPR018052
PROSITE:PS00545 Uniprot:Q9HDU3
Length = 713
Score = 185 (70.2 bits), Expect = 3.9e-14, Sum P(3) = 3.9e-14
Identities = 54/164 (32%), Positives = 82/164 (50%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKL-DYCSNLKNLNPSRLSPNFKFIKGDVA 68
IL+TG AG+I SH LI + YK++++D L + C + + + KF K D+
Sbjct: 8 ILVTGGAGYIGSHTVIELINH--GYKVIIVDNLCNSCYDAVARVEFIVRKSIKFFKLDLR 65
Query: 69 SADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRF 128
+ + I T KI ++HFAA V S E+ NNI GT LL + ++K
Sbjct: 66 DKEGLAQIFDTFKIKGVIHFAALKAVGESMKLPLEYYDNNICGTITLLNVMR-EHRVKTV 124
Query: 129 IHVSTDEVYGE-TDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 171
+ S+ VYG+ T D ++ E+ PTNPY TK E ++
Sbjct: 125 VFSSSATVYGDATRFDNMIPIPESCPNDPTNPYGKTKYAIENII 168
Score = 75 (31.5 bits), Expect = 3.9e-14, Sum P(3) = 3.9e-14
Identities = 33/147 (22%), Positives = 61/147 (41%)
Query: 193 PNQFPEKLIPKFILLAM-KGKPLPIHGD------GSNVRSYLYCEDVAEAFDTIL-HKGE 244
P P L+P +A+ + + L + GD G+ +R Y++ D+A+ L + +
Sbjct: 201 PLGIPNNLLPFLAQVAIGRREKLLVFGDDYDSHDGTPIRDYIHVVDLAKGHIAALNYLNK 260
Query: 245 VGH---VY---NIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKL 298
+ + +Y N+GT K V D+ CK + D + V R + +
Sbjct: 261 INNSEGMYREWNLGTGKGSSVFDIYHAFCK--EVGKDLPYEVVGRRTGDVLNLTASPNRA 318
Query: 299 K-QLGWYERVTWEEGLQKTMKWYISNP 324
+L W ++ + + KW I NP
Sbjct: 319 NSELKWKAELSITDACRDLWKWTIENP 345
Score = 49 (22.3 bits), Expect = 3.9e-14, Sum P(3) = 3.9e-14
Identities = 25/113 (22%), Positives = 47/113 (41%)
Query: 490 EYDAKHPEGTGIGFKEEDKPNFT-GSFYSKTKAMVEELLKEYDNVCTLRVRMPIS---SD 545
EY + PE + + + N + + S K + ++K NV L+V S D
Sbjct: 511 EYKSVIPEYSKLNVTAVNLTNHSYWNLASPNKTIDGTIIKSTTNVY-LKVNSETSLPTGD 569
Query: 546 LNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNLSGIWNFTNPGV 598
+ +N ITK ++ + ++ N + E ++ K +L I +P V
Sbjct: 570 IVEWQNDITKPTKLDPNISFDNCFIVDREASKFCLDTRKYSLKNIVEVIHPSV 622
>UNIPROTKB|Q6A1A4 [details] [associations]
symbol:galE "UDP-galactose 4-epimerase" species:644
"Aeromonas hydrophila" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IDA] [GO:0006012 "galactose metabolic process"
evidence=IC] [GO:0042803 "protein homodimerization activity"
evidence=IDA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AJ785765 ProteinModelPortal:Q6A1A4 SMR:Q6A1A4 Uniprot:Q6A1A4
Length = 338
Score = 208 (78.3 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 70/246 (28%), Positives = 117/246 (47%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP--SRLSPNFK-FIKGD 66
+L+TG +G+I SH C +L+ + + +V+LD L C++ +++ P RLS F++GD
Sbjct: 3 VLVTGGSGYIGSHTCVQLLQS--GHDVVILDNL--CNSKRSVLPVIERLSGKQPTFVEGD 58
Query: 67 VASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIK 126
+ + L+ IL I+T++HFA V S E+ NN+ GT L+ A + +K
Sbjct: 59 IRNEALMTEILHDHAIETVIHFAGLKAVGESVAKPLEYYDNNVNGTLRLISAMR-AANVK 117
Query: 127 RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS--------- 177
FI S+ VYG+ + V + P +PY +K E ++ ++
Sbjct: 118 NFIFSSSATVYGDQPKIPYVESFPTGT--PQSPYGKSKLMVEQILTDLQKAQPEWSIALL 175
Query: 178 -YGLPV-ITTRGNNVYGPNQFPEKLIPKFILLAM-KGKPLPIHG------DGSNVRSYLY 228
Y PV G+ P P LIP +A+ + L I G D + VR Y++
Sbjct: 176 RYFNPVGAHPSGDMGEDPQGIPNNLIPYIAQVAVGRRDSLAIFGNDYPPEDATAVRDYIH 235
Query: 229 CEDVAE 234
D+A+
Sbjct: 236 VMDLAD 241
>TIGR_CMR|GSU_0627 [details] [associations]
symbol:GSU_0627 "GDP-fucose synthetase" species:243231
"Geobacter sulfurreducens PCA" [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0016491 "oxidoreductase
activity" evidence=ISS] [GO:0016857 "racemase and epimerase
activity, acting on carbohydrates and derivatives" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0044237 HOGENOM:HOG000168011
KO:K02377 OMA:IHCAGRV RefSeq:NP_951685.1 ProteinModelPortal:Q74FI1
SMR:Q74FI1 GeneID:2685221 KEGG:gsu:GSU0627 PATRIC:22024005
ProtClustDB:CLSK827960 BioCyc:GSUL243231:GH27-626-MONOMER
Uniprot:Q74FI1
Length = 314
Score = 205 (77.2 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 61/230 (26%), Positives = 113/230 (49%)
Query: 103 EFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEAS-QLLPTNP-Y 160
EF +N+ ++ + TG + + + + + +Y + + + + L PTN Y
Sbjct: 79 EFIYDNLMIEANVIHSSYRTG-VSKLLFLGSTCIYPKMASQPIREEYLLTGPLEPTNEAY 137
Query: 161 SATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ-FP-EK------LIPKFILLAMKGK 212
+ K L +Y R YG I N+YGPN F EK LI KF + G
Sbjct: 138 AIAKIAGISLCRSYNRQYGTRFIAAMPTNLYGPNDNFDLEKSHVLPALIRKFHEAKIAGA 197
Query: 213 P-LPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFS 271
P + + G G+ +R +++ +DVA+A ++ E + NIG+ +E + D+A + K+
Sbjct: 198 PTVTVWGTGAPLREFIHVDDVADAALYLMRHHEGNDIVNIGSGEEISIRDLAL-LVKIV- 255
Query: 272 LNPDTQIKFVENRPFNDQRYFLDVQKLKQLGWYERVTWEEGLQKTMKWYI 321
+ + ++ F ++P R DV +L LGW R+ E+G+++T +W++
Sbjct: 256 VGFEGELVFDASKPDGTPRKLSDVSRLHSLGWRHRIGLEDGVRETYEWFV 305
>TIGR_CMR|BA_3248 [details] [associations]
symbol:BA_3248 "3-beta hydroxysteroid
dehydrogenase/isomerase family protein" species:198094 "Bacillus
anthracis str. Ames" [GO:0006694 "steroid biosynthetic process"
evidence=ISS] [GO:0030283 "testosterone dehydrogenase [NAD(P)]
activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 HOGENOM:HOG000167989 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0016853 GO:GO:0044237 OMA:ERFGNKS
RefSeq:NP_845549.1 RefSeq:YP_019886.1 RefSeq:YP_029273.1
ProteinModelPortal:Q81NF3 DNASU:1084046
EnsemblBacteria:EBBACT00000013025 EnsemblBacteria:EBBACT00000016605
EnsemblBacteria:EBBACT00000023035 GeneID:1084046 GeneID:2820109
GeneID:2852271 KEGG:ban:BA_3248 KEGG:bar:GBAA_3248 KEGG:bat:BAS3016
ProtClustDB:CLSK918137 BioCyc:BANT260799:GJAJ-3078-MONOMER
BioCyc:BANT261594:GJ7F-3182-MONOMER Uniprot:Q81NF3
Length = 328
Score = 193 (73.0 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 75/264 (28%), Positives = 120/264 (45%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
+L+TG GF+ + RL Y++ + + N KF+ +
Sbjct: 3 MLVTGGTGFLGQKLAFRL--KNMGYEVTATGRNKTIGKVLEQN------GIKFVHCPLED 54
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFI 129
+ V + + + D I H A + + +G +F N+ GT ++E + G IKR I
Sbjct: 55 RERV--LQVCKDKDYIFHSGAHS---SPWGKYEDFYNANVLGTKHIIEGSQKYG-IKRLI 108
Query: 130 HVSTDEVYGETDE-DAVVGNHEASQLLPTNPYSATKAGAEMLV-MAYGRSYGLPVITTRG 187
HVST +Y DE VV N + N Y+ TK AE + A+ ++GLPVIT R
Sbjct: 109 HVSTPSIYFYYDERQNVVENAKLPDTF-VNHYATTKYMAEQAIDQAF--AHGLPVITIRP 165
Query: 188 NNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILH--KGEV 245
++GP ++P+ I + KG LP G + + Y E+V +A +H K +
Sbjct: 166 RALFGPGD--NAILPRLIKVCEKGA-LPRIGTENVLVDITYVENVVDALLLCMHSPKHTL 222
Query: 246 GHVYNIGTKKER-RVIDVATDICK 268
G YNI T ER + +V ++ K
Sbjct: 223 GQKYNI-TNDERINLYEVIENVMK 245
Score = 55 (24.4 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 293 LDVQKLKQ-LGWYERVTWEEGLQKTMKWY 320
L + K K+ LG+ +V+ EEG+ K + W+
Sbjct: 297 LSIDKAKEELGYAPKVSIEEGITKFVDWW 325
>TIGR_CMR|CPS_2147 [details] [associations]
symbol:CPS_2147 "UDP-glucose 4-epimerase" species:167879
"Colwellia psychrerythraea 34H" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:YP_268872.1 ProteinModelPortal:Q482Z5 SMR:Q482Z5
STRING:Q482Z5 GeneID:3518989 KEGG:cps:CPS_2147 PATRIC:21467411
OMA:QTAMGIR BioCyc:CPSY167879:GI48-2217-MONOMER Uniprot:Q482Z5
Length = 340
Score = 205 (77.2 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 78/276 (28%), Positives = 121/276 (43%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPN--FKFIKGD 66
++LITG G+I SH L+ + E +IV++D L S+ K L + N FIK D
Sbjct: 2 SLLITGGTGYIGSHTVVELLQSTKEQEIVIVDNLSN-SSTKVLERIKQITNKTVTFIKAD 60
Query: 67 VASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIK 126
V + + + KI+ ++HFA V S + +NN+ GT LL Q+K
Sbjct: 61 VCDENALEQVFNEHKIEAVIHFAGLKAVGESNEIPLAYYQNNVSGTITLLRVMA-KYQVK 119
Query: 127 RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS--------- 177
+ S+ VYG V +E TNPY TK E ++ +S
Sbjct: 120 NLVFSSSATVYGNN----VSPLNETMATSATNPYGQTKLMVEHVLFDLAKSDASWSIACL 175
Query: 178 -YGLPVITTRGNNV-YGPNQFPEKLIPKFILLAM-KGKPLPIHGD------GSNVRSYLY 228
Y P+ + + PN P L+P +A+ + + L I GD G+ VR Y++
Sbjct: 176 RYFNPIGAHQSGLIGENPNGIPNNLLPYVAQVAVGRLEQLQIFGDDYDTQDGTGVRDYIH 235
Query: 229 CEDVAEAFDTILHKGEVGHVYNIGTKKERRVIDVAT 264
D+A+ L +GH GT K + I++ T
Sbjct: 236 VVDLAQGHVKALES--LGHAK--GTVKGCQAINLGT 267
>TIGR_CMR|GSU_2240 [details] [associations]
symbol:GSU_2240 "UDP-glucose 4-epimerase" species:243231
"Geobacter sulfurreducens PCA" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P09147 RefSeq:NP_953289.1 ProteinModelPortal:Q74AW0
GeneID:2687202 KEGG:gsu:GSU2240 PATRIC:22027335 OMA:VEHARQG
ProtClustDB:CLSK828777 BioCyc:GSUL243231:GH27-2212-MONOMER
Uniprot:Q74AW0
Length = 326
Score = 200 (75.5 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 76/262 (29%), Positives = 115/262 (43%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
+L+TG AG+I SHV +L + Y +VV D NL P L + + GD++
Sbjct: 3 VLVTGGAGYIGSHVVRQL--SEAGYTVVVYD------NLSTGFPDALVHGERLVTGDLSD 54
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFI 129
+ + + T++HFAA S ++ NN T LL AC G ++RFI
Sbjct: 55 TARLDALFVEYGFSTVLHFAASIIAPESVTAPLKYYGNNTRNTLNLLGACVKHG-VERFI 113
Query: 130 HVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNN 189
ST VYG D E S +P NPY +K +E ++ ++G+ + R N
Sbjct: 114 FSSTAAVYGIPDSGVAA---EESATVPINPYGTSKLMSEWMLRDVCAAHGMRSVALRYFN 170
Query: 190 VYGPN-------QFPEKL-IPKFILLAMKG--KPLPIHG------DGSNVRSYLYCEDVA 233
V G + + PE + K A G + I G DG+ +R Y++ ED+A
Sbjct: 171 VAGADPQARMGQRTPEATHLIKVSCQAALGLRDKVCIFGTDYPTPDGTGIRDYIHVEDLA 230
Query: 234 EAFD---TILHKGEVGHVYNIG 252
A + L KG N+G
Sbjct: 231 SAHLAALSYLEKGGESTRINVG 252
>TAIR|locus:2057786 [details] [associations]
symbol:3BETAHSD/D2
"3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA;ISS] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA;ISS] [GO:0016616 "oxidoreductase activity, acting on
the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016020
"membrane" evidence=IDA] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IGI;IDA]
[GO:0016126 "sterol biosynthetic process" evidence=RCA] [GO:0019745
"pentacyclic triterpenoid biosynthetic process" evidence=RCA]
UniPathway:UPA00770 InterPro:IPR002225 InterPro:IPR003388
Pfam:PF01073 Pfam:PF02453 PROSITE:PS50845 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0016126 EMBL:AC004484
GO:GO:0047012 EMBL:DQ302749 EMBL:BX818951 EMBL:AK176177
IPI:IPI00540500 IPI:IPI00657508 IPI:IPI00929941 PIR:C84658
RefSeq:NP_001031422.1 RefSeq:NP_180194.2 UniGene:At.38921
ProteinModelPortal:Q67ZE1 SMR:Q67ZE1 PaxDb:Q67ZE1 PRIDE:Q67ZE1
EnsemblPlants:AT2G26260.1 GeneID:817166 KEGG:ath:AT2G26260
TAIR:At2g26260 InParanoid:Q67ZE1 OMA:DTLLWKD PhylomeDB:Q67ZE1
ProtClustDB:CLSN2716544 Genevestigator:Q67ZE1 Uniprot:Q67ZE1
Length = 564
Score = 203 (76.5 bits), Expect = 7.8e-13, P = 7.8e-13
Identities = 68/242 (28%), Positives = 113/242 (46%)
Query: 2 ATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLD-----KLDYCSNLKNLNPSRL 56
A T + ++TG GF A H+ L+ Y + + + D LD L+
Sbjct: 4 AATETERWCVVTGGRGFAARHLVEMLV-RYEMFCVRIADLAPAIMLDPQEGNGVLDEGLR 62
Query: 57 SPNFKFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGN-SFEFTKNNIYGTHVL 115
S ++I D+ V + + + + H AA D+S N +++ N + GT +
Sbjct: 63 SGRVQYISADLRDKSQV--VKAFQGAEVVFHMAAP---DSSINNHQLQYSVN-VQGTQNV 116
Query: 116 LEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNP-YSATKA-GAEMLVMA 173
++AC G +KR I+ S+ V + + G + + N YSATKA G E+++ A
Sbjct: 117 IDACVDVG-VKRLIYTSSPSVVFDGVHGILNGTESMAYPIKHNDSYSATKAEGEELIMKA 175
Query: 174 YGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVA 233
GR+ GL R ++++GP L+P + A GK I GDG+N+ + Y E+VA
Sbjct: 176 NGRN-GLLTCCIRPSSIFGPGD--RLLVPSLVAAARAGKSKFIIGDGNNLYDFTYVENVA 232
Query: 234 EA 235
A
Sbjct: 233 HA 234
>TAIR|locus:2123466 [details] [associations]
symbol:UGE5 "UDP-D-glucose/UDP-D-galactose 4-epimerase 5"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
InterPro:IPR001509 InterPro:IPR005886 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214 InterPro:IPR016040
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
EMBL:AL161518 ProtClustDB:PLN02240 EMBL:AF080118 EMBL:AL049525
EMBL:AY065354 EMBL:AY117180 EMBL:AY140073 EMBL:AY085528
IPI:IPI00540537 PIR:T01881 PIR:T04291 RefSeq:NP_192834.1
UniGene:At.48845 ProteinModelPortal:Q9SN58 SMR:Q9SN58 IntAct:Q9SN58
STRING:Q9SN58 PaxDb:Q9SN58 PRIDE:Q9SN58 EnsemblPlants:AT4G10960.1
GeneID:826696 KEGG:ath:AT4G10960 TAIR:At4g10960 InParanoid:Q9SN58
OMA:ADKAWNA PhylomeDB:Q9SN58 Genevestigator:Q9SN58 Uniprot:Q9SN58
Length = 351
Score = 194 (73.4 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 75/260 (28%), Positives = 107/260 (41%)
Query: 8 KNILITGAAGFIASH-VCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPN----FKF 62
+N+L++G AG+I SH V L+G Y +VV+D LD S + +L+ F
Sbjct: 4 RNVLVSGGAGYIGSHTVLQLLLGGY---SVVVVDNLDNSSAVSLQRVKKLAAEHGERLSF 60
Query: 63 IKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKIT 122
+ D+ + I K D ++HFA V S + NN+ GT LLE
Sbjct: 61 HQVDLRDRSALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNLVGTITLLEVMAQH 120
Query: 123 GQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVM-AYGRSYGLP 181
G K + S+ VYG E S L NPY TK E + YG
Sbjct: 121 G-CKNLVFSSSATVYGSPKEVPCTEEFPISAL---NPYGRTKLFIEEICRDVYGSDPEWK 176
Query: 182 VITTRGNNVYG----------PNQFPEKLIPKFILLAMKGKP-LPIHG------DGSNVR 224
+I R N G P P L+P +A+ +P L + G DG+ VR
Sbjct: 177 IILLRYFNPVGAHPSGDIGEDPRGIPNNLMPFVQQVAVGRRPHLTVFGNDYNTKDGTGVR 236
Query: 225 SYLYCEDVAEAFDTILHKGE 244
Y++ D+A+ L K E
Sbjct: 237 DYIHVIDLADGHIAALRKLE 256
>TAIR|locus:2203771 [details] [associations]
symbol:3BETAHSD/D1
"3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA;ISS] [GO:0006694 "steroid
biosynthetic process" evidence=IEA;ISS] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016020 "membrane" evidence=IDA] [GO:0047012
"sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating)
activity" evidence=IGI;IDA] [GO:0006084 "acetyl-CoA metabolic
process" evidence=RCA] [GO:0016126 "sterol biosynthetic process"
evidence=RCA] [GO:0016132 "brassinosteroid biosynthetic process"
evidence=RCA] [GO:0019745 "pentacyclic triterpenoid biosynthetic
process" evidence=RCA] UniPathway:UPA00770 InterPro:IPR002225
Pfam:PF01073 PROSITE:PS50845 InterPro:IPR016040 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0016020
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0016126 EMBL:AC015449
KO:K07748 GO:GO:0047012 EMBL:AY957470 EMBL:AK117478 EMBL:BT005166
EMBL:AY085272 IPI:IPI00543327 IPI:IPI00545978 PIR:F96513
RefSeq:NP_564502.1 RefSeq:NP_849779.1 UniGene:At.38654
ProteinModelPortal:Q9FX01 SMR:Q9FX01 IntAct:Q9FX01 PaxDb:Q9FX01
PRIDE:Q9FX01 EnsemblPlants:AT1G47290.2 GeneID:841132
KEGG:ath:AT1G47290 TAIR:At1g47290 InParanoid:Q9FX01 OMA:YLVELAY
PhylomeDB:Q9FX01 ProtClustDB:CLSN2688501 Genevestigator:Q9FX01
Uniprot:Q9FX01
Length = 439
Score = 195 (73.7 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 71/245 (28%), Positives = 110/245 (44%)
Query: 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNF 60
M T + ++TG GF A H+ L+ Y + + + D + L
Sbjct: 3 MEVTETERWCVVTGGRGFAARHLVEMLV-RYQMFHVRIADLAPAIVLNPHEETGILGEAI 61
Query: 61 KFIKGDVASADL---VHFILLTEKIDTIMHFAAQTHVDNSFGN-SFEFTKNNIYGTHVLL 116
+ + SADL + + + + H AA D+S N +++ N + GT ++
Sbjct: 62 RSGRVQYVSADLRNKTQVVKGFQGAEVVFHMAAP---DSSINNHQLQYSVN-VQGTTNVI 117
Query: 117 EACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNP-----YSATKAGAEMLV 171
+AC G +KR I+ S+ V D V G A + LP P YSATKA E L+
Sbjct: 118 DACIEVG-VKRLIYTSSPSVVF----DGVHGTLNADESLPYPPKHNDSYSATKAEGEALI 172
Query: 172 M-AYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCE 230
+ A GRS GL R ++++GP + ++P + A GK I GDGSN + Y E
Sbjct: 173 LKANGRS-GLLTCCIRPSSIFGPGD--KLMVPSLVTAARAGKSKFIIGDGSNFYDFTYVE 229
Query: 231 DVAEA 235
+V A
Sbjct: 230 NVVHA 234
>TAIR|locus:2015253 [details] [associations]
symbol:UGE3 "UDP-D-glucose/UDP-D-galactose 4-epimerase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IPI] [GO:0009555 "pollen development" evidence=IMP]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 EMBL:CP002684 GO:GO:0009555 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:Q14376
ProtClustDB:PLN02240 EMBL:AY085887 EMBL:BT024882 EMBL:AK117913
IPI:IPI00534992 RefSeq:NP_564811.1 UniGene:At.36168
ProteinModelPortal:Q8LDN8 SMR:Q8LDN8 STRING:Q8LDN8 PRIDE:Q8LDN8
EnsemblPlants:AT1G63180.1 GeneID:842622 KEGG:ath:AT1G63180
TAIR:At1g63180 InParanoid:Q8LDN8 OMA:FWADASL PhylomeDB:Q8LDN8
Genevestigator:Q8LDN8 Uniprot:Q8LDN8
Length = 351
Score = 192 (72.6 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 71/258 (27%), Positives = 111/258 (43%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYC-----SNLKNLNPSRLSPNFKF 62
+NIL+TG AGFI +H +L+ +K+ ++D LD ++ L LS +F
Sbjct: 7 QNILVTGGAGFIGTHTVVQLLNQ--GFKVTIIDNLDNSVVEAVHRVRELVGPDLSTKLEF 64
Query: 63 IKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKIT 122
GD+ + + + ++ D ++HFA V S GN + NN+ GT L E
Sbjct: 65 NLGDLRNKGDIEKLFSNQRFDAVIHFAGLKAVGESVGNPRRYFDNNLVGTINLYETMA-K 123
Query: 123 GQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVM-AYGRSYGLP 181
K + S+ VYG+ + +V E +L NPY TK E + +
Sbjct: 124 YNCKMMVFSSSATVYGQPE---IVPCVEDFELQAMNPYGRTKLFLEEIARDIHAAEPEWK 180
Query: 182 VITTRGNNVYG----------PNQFPEKLIPKFILLAMKGKP-LPIHG------DGSNVR 224
+I R N G P P L+P +A+ P L + G DGS VR
Sbjct: 181 IILLRYFNPVGAHESGRIGEDPKGIPNNLMPYIQQVAVGRLPELNVFGHDYPTMDGSAVR 240
Query: 225 SYLYCEDVAEAFDTILHK 242
Y++ D+A+ L+K
Sbjct: 241 DYIHVMDLADGHVAALNK 258
>ASPGD|ASPL0000028763 [details] [associations]
symbol:AN11081 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006694 "steroid biosynthetic process" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694 EMBL:BN001305
ProteinModelPortal:C8VEF0 EnsemblFungi:CADANIAT00002923 OMA:WIAVITE
Uniprot:C8VEF0
Length = 364
Score = 171 (65.3 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 68/256 (26%), Positives = 108/256 (42%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
+LITG GFIA H+ +L+ P I +D + +N++ S + + +GD++S
Sbjct: 9 VLITGGNGFIAYHIIAKLLAEDPNCTIHCID----INTTRNIHAS---DSVTYHQGDLSS 61
Query: 70 -ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIY--GTHVLLEACKITGQIK 126
AD+ + L + TI H A+ F + E +++ GTH LL + G +K
Sbjct: 62 LADVSRIMELARPV-TIFHTASP-----EFSEAPESAYHDVIVTGTHHLLNSAASIGTVK 115
Query: 127 RFIHVSTDEVYGETDEDAVVGNHEASQLLPT---NPYSATKAGAEMLVMAYGRSYGLPVI 183
I+ ST V + D V G + L P Y KA AE + A R +G
Sbjct: 116 ALINTSTSGVINDNHTDLVNGTEDMPILRPPVQKRLYCLAKADAEEAIQAANRQHGFLTC 175
Query: 184 TTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG 243
R +G + K + +A G+ G G N ++Y ++A+A H
Sbjct: 176 ALRPCLAFGERD--TNSMGKMVAVARAGRSRFQMGYGKNAYDFVYVGNLADAHLLAAHAL 233
Query: 244 EVGHVYNIGTKKERRV 259
H N +RRV
Sbjct: 234 IDAHA-NPPLPADRRV 248
Score = 66 (28.3 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 11/34 (32%), Positives = 24/34 (70%)
Query: 293 LDVQKLKQ-LGWYERVTWEEGLQKTMKWYISNPD 325
L+ +K ++ LG+ RV +EG+++ ++W+ NP+
Sbjct: 328 LNCEKARRVLGYQPRVGMQEGIERGVRWFKENPE 361
>TIGR_CMR|SO_1664 [details] [associations]
symbol:SO_1664 "UDP-glucose 4-epimerase" species:211586
"Shewanella oneidensis MR-1" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0005975 "carbohydrate metabolic
process" evidence=ISS] InterPro:IPR001509 InterPro:IPR005886
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P09147 RefSeq:NP_717275.1 ProteinModelPortal:Q8EGE0
GeneID:1169457 KEGG:son:SO_1664 PATRIC:23522965 OMA:CGKSIAY
ProtClustDB:CLSK906369 Uniprot:Q8EGE0
Length = 337
Score = 190 (71.9 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 87/351 (24%), Positives = 146/351 (41%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP-SRLS-PNFKFIKGDV 67
IL+TG AG+I +H L+ E ++VLD L S+++ L+ R++ + F +GD+
Sbjct: 3 ILVTGGAGYIGTHTVVELLNAGSE--VIVLDNLSN-SSIEALDRVERITGKSVTFYQGDI 59
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQ--I 125
+ L+ + ID ++HFA V S ++ +NN+ GT +L C++ + +
Sbjct: 60 LNKALLQKVFSDHSIDAVIHFAGLKAVGESVAKPLKYYENNVTGTLIL---CQVMAEFKV 116
Query: 126 KRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS-------- 177
K + S+ VYG+ + + TNPY +K E ++ S
Sbjct: 117 KNLVFSSSATVYGDPASLPITEDFPTGA---TNPYGQSKLMVEHILADLHHSDPSWNIAR 173
Query: 178 --YGLPVITTRGNNVYG--PNQFPEKLIPKFIL---------LAMKGKPLPIHGDGSNVR 224
Y PV + + G PN P L+P FI L++ G P H DG+ VR
Sbjct: 174 LRYFNPV-GAHASGLIGEDPNDIPNNLMP-FIAQVAVGKREALSVFGNDYPTH-DGTGVR 230
Query: 225 SYLYCEDVAEAFDTILHKGEVGHVYNIGTKKERRVIDVAT-------DICKLFSLNPDTQ 277
Y++ D+A L K + TK ++ T D+ K F
Sbjct: 231 DYIHVVDLAIGHLKALEK--------LATKPGLVTYNLGTGQGYSVLDMVKAFEKACGKS 282
Query: 278 IKFV--ENRPFNDQRYFLDVQKLK-QLGWYERVTWEEGLQKTMKWYISNPD 325
I ++ RP + + D K L W + E+ + W +NP+
Sbjct: 283 IAYLIAPRRPGDIAACYADPDHAKTDLDWQATHSLEDMANSSWHWQSTNPN 333
>TAIR|locus:2138121 [details] [associations]
symbol:UGE2 "UDP-D-glucose/UDP-D-galactose 4-epimerase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AL078468 EMBL:AL161560 KO:K01784 GO:GO:0042546
ProtClustDB:PLN02240 EMBL:BT008539 IPI:IPI00516246 PIR:T08911
RefSeq:NP_194123.1 UniGene:At.3390 ProteinModelPortal:Q9T0A7
SMR:Q9T0A7 IntAct:Q9T0A7 STRING:Q9T0A7 PaxDb:Q9T0A7 PRIDE:Q9T0A7
EnsemblPlants:AT4G23920.1 GeneID:828492 KEGG:ath:AT4G23920
TAIR:At4g23920 InParanoid:Q9T0A7 OMA:THAPIDA PhylomeDB:Q9T0A7
Genevestigator:Q9T0A7 GermOnline:AT4G23920 Uniprot:Q9T0A7
Length = 350
Score = 185 (70.2 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 80/261 (30%), Positives = 112/261 (42%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCS-----NLKNL---NPSRLSPN 59
K++L+TG AG+I SH +L+ Y VV+D D S +K L N +RLS
Sbjct: 3 KSVLVTGGAGYIGSHTVLQLLEG--GYSAVVVDNYDNSSAASLQRVKKLAGENGNRLS-- 58
Query: 60 FKFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEAC 119
F + D+ + I K D ++HFA V S + NNI GT LLE
Sbjct: 59 --FHQVDLRDRPALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNIVGTVTLLEVM 116
Query: 120 KITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG 179
G K + S+ VYG E V E S + TNPY TK E + RS
Sbjct: 117 AQYG-CKNLVFSSSATVYGWPKE---VPCTEESPISATNPYGRTKLFIEEICRDVHRSDS 172
Query: 180 -LPVITTRGNNVYG--PNQF--------PEKLIPKFILLAMKGKP-LPIHG------DGS 221
+I R N G P+ + P L+P +A+ +P L + G DG+
Sbjct: 173 EWKIILLRYFNPVGAHPSGYIGEDPLGVPNNLMPYVQQVAVGRRPHLTVFGTDYKTKDGT 232
Query: 222 NVRSYLYCEDVAEAFDTILHK 242
VR Y++ D+A+ L K
Sbjct: 233 GVRDYIHVMDLADGHIAALRK 253
>CGD|CAL0000448 [details] [associations]
symbol:GAL10 species:5476 "Candida albicans" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IGI] [GO:0019388
"galactose catabolic process" evidence=IEP;IGI;IMP] [GO:0001403
"invasive growth in response to glucose limitation" evidence=IMP]
[GO:0009272 "fungal-type cell wall biogenesis" evidence=IMP]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0034599
"cellular response to oxidative stress" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0042149 "cellular response to glucose starvation" evidence=IMP]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0060257 "negative regulation of
flocculation" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=IEA] [GO:0042125 "protein galactosylation"
evidence=IEA] [GO:0004034 "aldose 1-epimerase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000448
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0034599
GO:GO:0030246 GO:GO:0042149 GO:GO:0009272 GO:GO:0044237
SUPFAM:SSF74650 GO:GO:0001403 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AACQ01000118 EMBL:AACQ01000119 Gene3D:2.70.98.10 GO:GO:0019388
GO:GO:0060257 GO:GO:1900429 eggNOG:COG2017 KO:K15917
RefSeq:XP_713732.1 RefSeq:XP_713766.1 ProteinModelPortal:Q59VY6
SMR:Q59VY6 STRING:Q59VY6 GeneID:3644583 GeneID:3644609
KEGG:cal:CaO19.11156 KEGG:cal:CaO19.3672 Uniprot:Q59VY6
Length = 675
Score = 189 (71.6 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 71/252 (28%), Positives = 108/252 (42%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCS-NLKNLNPSRLSPNFKFIKGDVA 68
IL+TG AG+I SH LI N YK+V++D L S + + + F D+
Sbjct: 6 ILVTGGAGYIGSHTVIELISN--GYKVVIVDNLSNSSYDAVARIEFIVKQHVPFYDVDIR 63
Query: 69 SADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRF 128
+ + ++ + KI ++HFAA V S + NN+ GT LLE CK +K
Sbjct: 64 NYEQLNKVFQDYKISGVIHFAALKAVGESTKIPLAYYDNNVSGTVNLLEVCK-ANDVKTI 122
Query: 129 IHVSTDEVYGETD---EDAVVGNHEASQLLPTNPYSATKAGAEMLVM-AYGRSYGLPVIT 184
+ S+ VYG+ +++++ E + PTNPY TK E ++ Y V
Sbjct: 123 VFSSSATVYGDVTRFGDNSMIPIPEHCPMDPTNPYGRTKFIIESILKDIYNSDDAWKVAI 182
Query: 185 TRGNNVYG----------PNQFPEKLIPKFILLAM-KGKPLPIHGDGSNVRSYLYCEDVA 233
R N G P P L+P +A+ + + L I G+ N R D
Sbjct: 183 LRYFNPIGAHPSGLLGEDPLGIPNNLLPYLAQVAIGRREKLSIFGNDYNSRDGTPIRDYI 242
Query: 234 EAFDTILHKGEV 245
D L KG +
Sbjct: 243 HVVD--LAKGHI 252
>UNIPROTKB|Q59VY6 [details] [associations]
symbol:GAL10 "Putative uncharacterized protein GAL10"
species:237561 "Candida albicans SC5314" [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IGI] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0019388
"galactose catabolic process" evidence=IGI;IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0034599 "cellular response
to oxidative stress" evidence=IMP] [GO:0042149 "cellular response
to glucose starvation" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0060257 "negative regulation of flocculation" evidence=IMP]
[GO:1900429 "negative regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP]
InterPro:IPR001509 InterPro:IPR005886 InterPro:IPR008183
InterPro:IPR011013 InterPro:IPR014718 Pfam:PF01263 Pfam:PF01370
InterPro:IPR016040 CGD:CAL0000448 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0034599 GO:GO:0030246 GO:GO:0042149
GO:GO:0009272 GO:GO:0044237 SUPFAM:SSF74650 GO:GO:0001403
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 EMBL:AACQ01000118 EMBL:AACQ01000119
Gene3D:2.70.98.10 GO:GO:0019388 GO:GO:0060257 GO:GO:1900429
eggNOG:COG2017 KO:K15917 RefSeq:XP_713732.1 RefSeq:XP_713766.1
ProteinModelPortal:Q59VY6 SMR:Q59VY6 STRING:Q59VY6 GeneID:3644583
GeneID:3644609 KEGG:cal:CaO19.11156 KEGG:cal:CaO19.3672
Uniprot:Q59VY6
Length = 675
Score = 189 (71.6 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 71/252 (28%), Positives = 108/252 (42%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCS-NLKNLNPSRLSPNFKFIKGDVA 68
IL+TG AG+I SH LI N YK+V++D L S + + + F D+
Sbjct: 6 ILVTGGAGYIGSHTVIELISN--GYKVVIVDNLSNSSYDAVARIEFIVKQHVPFYDVDIR 63
Query: 69 SADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRF 128
+ + ++ + KI ++HFAA V S + NN+ GT LLE CK +K
Sbjct: 64 NYEQLNKVFQDYKISGVIHFAALKAVGESTKIPLAYYDNNVSGTVNLLEVCK-ANDVKTI 122
Query: 129 IHVSTDEVYGETD---EDAVVGNHEASQLLPTNPYSATKAGAEMLVM-AYGRSYGLPVIT 184
+ S+ VYG+ +++++ E + PTNPY TK E ++ Y V
Sbjct: 123 VFSSSATVYGDVTRFGDNSMIPIPEHCPMDPTNPYGRTKFIIESILKDIYNSDDAWKVAI 182
Query: 185 TRGNNVYG----------PNQFPEKLIPKFILLAM-KGKPLPIHGDGSNVRSYLYCEDVA 233
R N G P P L+P +A+ + + L I G+ N R D
Sbjct: 183 LRYFNPIGAHPSGLLGEDPLGIPNNLLPYLAQVAIGRREKLSIFGNDYNSRDGTPIRDYI 242
Query: 234 EAFDTILHKGEV 245
D L KG +
Sbjct: 243 HVVD--LAKGHI 252
>UNIPROTKB|P32055 [details] [associations]
symbol:fcl "Fcl" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] [GO:0009242 "colanic acid biosynthetic
process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA]
[GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00128 UniPathway:UPA00980
InterPro:IPR016040 GO:GO:0005737 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0016853
GO:GO:0009103 HOGENOM:HOG000168011 KO:K02377 GO:GO:0050577
GO:GO:0042351 EMBL:U38473 PIR:C64971 RefSeq:NP_416556.1
RefSeq:YP_490294.1 PDB:1BSV PDB:1BWS PDB:1E6U PDB:1E7Q PDB:1E7R
PDB:1E7S PDB:1FXS PDB:1GFS PDBsum:1BSV PDBsum:1BWS PDBsum:1E6U
PDBsum:1E7Q PDBsum:1E7R PDBsum:1E7S PDBsum:1FXS PDBsum:1GFS
ProteinModelPortal:P32055 SMR:P32055 IntAct:P32055
EnsemblBacteria:EBESCT00000000077 EnsemblBacteria:EBESCT00000014550
GeneID:12930697 GeneID:946563 KEGG:ecj:Y75_p2015 KEGG:eco:b2052
PATRIC:32119437 EchoBASE:EB1736 EcoGene:EG11788 OMA:ASVHVMN
ProtClustDB:CLSK880275 BioCyc:EcoCyc:FCL-MONOMER
BioCyc:ECOL316407:JW2037-MONOMER BioCyc:MetaCyc:FCL-MONOMER
EvolutionaryTrace:P32055 Genevestigator:P32055 GO:GO:0009242
Uniprot:P32055
Length = 321
Score = 180 (68.4 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 52/186 (27%), Positives = 85/186 (45%)
Query: 159 PYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGP--NQFPEK--LIPKFI-----LLAM 209
PY+ K L +Y R YG + N+YGP N P +IP + A
Sbjct: 135 PYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQ 194
Query: 210 KGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG-EV---------GHVYNIGTKKERRV 259
+ + G G+ +R +L+ +D+A A ++ EV H+ N+GT + +
Sbjct: 195 NAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHI-NVGTGVDCTI 253
Query: 260 IDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQLGWYERVTWEEGLQKTMKW 319
++A I K+ ++ F ++P R LDV +L QLGWY ++ E GL T +W
Sbjct: 254 RELAQTIAKVVGYKG--RVVFDASKPDGTPRKLLDVTRLHQLGWYHEISLEAGLASTYQW 311
Query: 320 YISNPD 325
++ N D
Sbjct: 312 FLENQD 317
>SGD|S000002969 [details] [associations]
symbol:ERG26 "C-3 sterol dehydrogenase" species:4932
"Saccharomyces cerevisiae" [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA;IDA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0006696 "ergosterol biosynthetic
process" evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016126 "sterol biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0008202 "steroid metabolic process" evidence=IEA] [GO:0006629
"lipid metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000252 "C-3 sterol dehydrogenase (C-4
sterol decarboxylase) activity" evidence=IDA] UniPathway:UPA00770
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 SGD:S000002969
EMBL:BK006941 eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789
GeneTree:ENSGT00550000074557 OMA:IQLQPTF GO:GO:0006696 KO:K07748
OrthoDB:EOG4DNJD4 GO:GO:0000252 GO:GO:0047012 EMBL:Z72523
EMBL:AY693026 PIR:S64003 RefSeq:NP_011514.1
ProteinModelPortal:P53199 SMR:P53199 DIP:DIP-6786N IntAct:P53199
MINT:MINT-666123 STRING:P53199 PaxDb:P53199 PeptideAtlas:P53199
EnsemblFungi:YGL001C GeneID:852883 KEGG:sce:YGL001C CYGD:YGL001c
BioCyc:MetaCyc:YGL001C-MONOMER NextBio:972532 Genevestigator:P53199
GermOnline:YGL001C Uniprot:P53199
Length = 349
Score = 164 (62.8 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 58/231 (25%), Positives = 105/231 (45%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVA 68
++LI G +GF+ H+ + P+ I + D D L + + KF KGD+
Sbjct: 6 SVLIIGGSGFLGLHLIQQFFDINPKPDIHIFDVRDLPEKLSKQFTFNVD-DIKFHKGDLT 64
Query: 69 SADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRF 128
S D + + K + ++H A+ H N + ++ N+ GT +++ CK G +
Sbjct: 65 SPDDMENAINESKANVVVHCASPMHGQNP--DIYDIV--NVKGTRNVIDMCKKCG-VNIL 119
Query: 129 IHVSTDEVYGETDEDAVVGNHEASQLLPTNP---YSATKAGAE-MLVMAYGRSYGLPVIT 184
++ S+ V + V N + + +P P Y+ TKA AE M++ A S +
Sbjct: 120 VYTSSAGVIFNGQD---VHNADETWPIPEVPMDAYNETKAIAEDMVLKANDPSSDFYTVA 176
Query: 185 TRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEA 235
R ++GP +L+P +A G+ GD +N+ + Y +VA+A
Sbjct: 177 LRPAGIFGPGD--RQLVPGLRQVAKLGQSKFQIGDNNNLFDWTYAGNVADA 225
Score = 59 (25.8 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 290 RYFLDVQKLKQLGWYERVTWEEGLQKTMKW 319
RY + K LG+ RV EEG+ KT+ W
Sbjct: 315 RYHNIAKAKKLLGYTPRVGIEEGINKTLAW 344
>TIGR_CMR|CJE_1287 [details] [associations]
symbol:CJE_1287 "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:195099 "Campylobacter jejuni RM1221" [GO:0008712
"ADP-glyceromanno-heptose 6-epimerase activity" evidence=ISS]
[GO:0009244 "lipopolysaccharide core region biosynthetic process"
evidence=ISS] UniPathway:UPA00356 InterPro:IPR001509
InterPro:IPR011912 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
Gene3D:3.40.50.720 GO:GO:0005975 GO:GO:0050661 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0097171 HOGENOM:HOG000167987
KO:K03274 GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197
RefSeq:YP_179275.1 ProteinModelPortal:Q5HTW0 STRING:Q5HTW0
GeneID:3231794 KEGG:cjr:CJE1287 PATRIC:20044370 OMA:GSYQFHT
ProtClustDB:CLSK871664 BioCyc:CJEJ195099:GJC0-1313-MONOMER
Uniprot:Q5HTW0
Length = 317
Score = 177 (67.4 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 84/318 (26%), Positives = 139/318 (43%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFI---KGD 66
+ ITG AGFI S + L +++I+++DK+ + +N N +FK + G+
Sbjct: 3 VAITGGAGFIGSQLALNL---QEKHEILIIDKMRSSATFENGNLQSFG-HFKNLLEFDGE 58
Query: 67 VASADLVHFILLTE----KIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKIT 122
+ + D+ +L + K + I H AA + D + + + + N+ +E I
Sbjct: 59 LFAGDINDEKVLKKIEDFKPEIIFHQAAIS--DTTVFDQTKVLQTNLNTFKDFIEL-SID 115
Query: 123 GQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 182
K I+ S+ VYG+ VG E P NPY+ +K + L Y L
Sbjct: 116 LNAK-LIYASSASVYGDAKSPQTVGKDEE----PKNPYAFSKLMMDKLAKKYYDKAHL-- 168
Query: 183 ITTRGNNVYGPNQFPEKLIPKFILL----AMKGK-PLPIHGDGSNVRSYLYCEDVAEAFD 237
+ R NVYG +F + +L + GK P G R + Y +DV A +
Sbjct: 169 VGLRYFNVYGKGEFYKNKTASMVLQFGHQILAGKNPRLFEGSDQIYRDFTYIKDVINA-N 227
Query: 238 TILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQK 297
I + G VYN+G+ K R D+ DI + L D +++ N P+ F K
Sbjct: 228 LIALDSKCG-VYNVGSGKARTFQDIV-DILQK-ELKTDLPCEYIPN-PYVKSYQFHTEAK 283
Query: 298 LKQLGWYE-RVTWEEGLQ 314
L Q Y+ + + EEG++
Sbjct: 284 LDQTWDYQPKFSLEEGIK 301
>TAIR|locus:2010371 [details] [associations]
symbol:UGE1 "UDP-D-glucose/UDP-D-galactose 4-epimerase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA;TAS] [GO:0046983 "protein
dimerization activity" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0046369 "galactose biosynthetic process"
evidence=IDA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005886 GO:GO:0006950 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:AC012187
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 EMBL:Z54214 EMBL:AF334724
EMBL:AY054207 EMBL:AY120709 EMBL:BT000032 IPI:IPI00533120
PIR:B86261 PIR:S62783 RefSeq:NP_172738.1 UniGene:At.20506
UniGene:At.27284 ProteinModelPortal:Q42605 SMR:Q42605 IntAct:Q42605
STRING:Q42605 PaxDb:Q42605 PRIDE:Q42605 EnsemblPlants:AT1G12780.1
GeneID:837834 KEGG:ath:AT1G12780 TAIR:At1g12780 InParanoid:Q42605
OMA:CEAILAD PhylomeDB:Q42605 ProtClustDB:PLN02240
BioCyc:ARA:AT1G12780-MONOMER BioCyc:MetaCyc:AT1G12780-MONOMER
Genevestigator:Q42605 GermOnline:AT1G12780 Uniprot:Q42605
Length = 351
Score = 175 (66.7 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 66/258 (25%), Positives = 110/258 (42%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYC-----SNLKNLNPSRLSPNFKF 62
+NIL+TG AGFI +H +L+ + +K+ ++D D ++ L LS F
Sbjct: 7 QNILVTGGAGFIGTHTVVQLLKD--GFKVSIIDNFDNSVIEAVDRVRELVGPDLSKKLDF 64
Query: 63 IKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKIT 122
GD+ + + + ++ D ++HFA V S N + NN+ GT L E
Sbjct: 65 NLGDLRNKGDIEKLFSKQRFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYETMA-K 123
Query: 123 GQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS----- 177
K + S+ VYG+ ++ + + E + NPY TK E + ++
Sbjct: 124 YNCKMMVFSSSATVYGQPEKIPCMEDFELKAM---NPYGRTKLFLEEIARDIQKAEPEWR 180
Query: 178 -----YGLPVITTRGNNV-YGPNQFPEKLIPKFILLAMKGKP-LPIHG------DGSNVR 224
Y PV ++ P P L+P +A+ P L ++G DGS VR
Sbjct: 181 IILLRYFNPVGAHESGSIGEDPKGIPNNLMPYIQQVAVGRLPELNVYGHDYPTEDGSAVR 240
Query: 225 SYLYCEDVAEAFDTILHK 242
Y++ D+A+ L K
Sbjct: 241 DYIHVMDLADGHIAALRK 258
>UNIPROTKB|P0A5D1 [details] [associations]
symbol:MT0522 "Uncharacterized protein Rv0501/MT0522"
species:1773 "Mycobacterium tuberculosis" [GO:0005576
"extracellular region" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005829
GO:GO:0005886 GO:GO:0005576 GO:GO:0003824 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:BX842573
GO:GO:0044237 KO:K01784 KEGG:mtu:Rv3634c PIR:C70546 PIR:H70745
RefSeq:NP_215050.2 RefSeq:NP_334931.1 RefSeq:YP_006513834.1
ProteinModelPortal:P0A5D1 SMR:P0A5D1 PRIDE:P0A5D1
EnsemblBacteria:EBMYCT00000002993 EnsemblBacteria:EBMYCT00000072795
GeneID:13318375 GeneID:887228 GeneID:923918 KEGG:mtc:MT0522
KEGG:mtu:Rv0501 KEGG:mtv:RVBD_0501 PATRIC:18122858
TubercuList:Rv0501 HOGENOM:HOG000053265 OMA:EVEGYVR
ProtClustDB:CLSK881171 Uniprot:P0A5D1
Length = 376
Score = 175 (66.7 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 61/249 (24%), Positives = 116/249 (46%)
Query: 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGD 66
PK +L+TGA F+ ++ RL N +++ +D + + K++ R +F++ D
Sbjct: 23 PKVVLVTGACRFLGGYLTARLAQNPLINRVIAVDAI---APSKDM--LRRMGRAEFVRAD 77
Query: 67 VASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIK 126
+ + + ++ ++DT++H AA ++ S G S + N+ G L AC+ ++
Sbjct: 78 IRNPFIAK-VIRNGEVDTVVHAAAASYAPRS-GGSAALKELNVMGAMQLFAACQKAPSVR 135
Query: 127 RFIHVSTDEVYGETDEDAVVGNHEASQLLP-TNPYSATKAGAEMLVMAYGRSY-GLPVIT 184
R + ST EVYG + D V+ ++S P + + E V A GR + V
Sbjct: 136 RVVLKSTSEVYGSSPHDPVMFTEDSSSRRPFSQGFPKDSLDIEGYVRALGRRRPDIAVTI 195
Query: 185 TRGNNVYGPNQFPEKLIPKFILLAMKGKPLP-IHGDGSNVRSYLYCEDVAEAFDTILHKG 243
R N+ GP + + +++ G +P I G + ++ L+ +D A + G
Sbjct: 196 LRLANMIGPAM--DTTLSRYLA----GPLVPTIFGRDARLQ-LLHEQDALGALERAAMAG 248
Query: 244 EVGHVYNIG 252
+ G +NIG
Sbjct: 249 KAG-TFNIG 256
>TAIR|locus:2014235 [details] [associations]
symbol:RHD1 "ROOT HAIR DEFECTIVE 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA;TAS] [GO:0005794 "Golgi apparatus"
evidence=ISM] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0010053 "root epidermal cell differentiation" evidence=IMP]
[GO:0009832 "plant-type cell wall biogenesis" evidence=TAS]
[GO:0009969 "xyloglucan biosynthetic process" evidence=IMP]
[GO:0010246 "rhamnogalacturonan I biosynthetic process"
evidence=IMP] [GO:0010306 "rhamnogalacturonan II biosynthetic
process" evidence=IMP] [GO:0005795 "Golgi stack" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005795 GO:GO:0009832 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GO:GO:0010053 EMBL:AC066689 GO:GO:0009969 HSSP:Q14376
ProtClustDB:PLN02240 EMBL:BT011226 EMBL:BT012154 IPI:IPI00537209
RefSeq:NP_176625.1 UniGene:At.25758 ProteinModelPortal:Q9C7W7
SMR:Q9C7W7 STRING:Q9C7W7 PaxDb:Q9C7W7 PRIDE:Q9C7W7
EnsemblPlants:AT1G64440.1 GeneID:842752 KEGG:ath:AT1G64440
TAIR:At1g64440 InParanoid:Q9C7W7 OMA:HVAGYKY PhylomeDB:Q9C7W7
Genevestigator:Q9C7W7 Uniprot:Q9C7W7
Length = 348
Score = 172 (65.6 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 79/261 (30%), Positives = 109/261 (41%)
Query: 9 NILITGAAGFIASH-VCNRLIGNYPEYKIVVLDKLDYCS-----NLKNLNPSRLSPNFKF 62
NIL+TG AG+I SH V L+G Y VV+D LD S +K+L N
Sbjct: 4 NILVTGGAGYIGSHTVLQLLLGGY---NTVVIDNLDNSSLVSIQRVKDLAGDH-GQNLTV 59
Query: 63 IKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKIT 122
+ D+ + + K D +MHFA V S + NN+ T LLE
Sbjct: 60 HQVDLRDKPALEKVFSETKFDAVMHFAGLKAVGESVAKPLLYYNNNLIATITLLEVMAAH 119
Query: 123 GQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP- 181
G K+ + S+ VYG E V E S L +PY TK E + R G P
Sbjct: 120 G-CKKLVFSSSATVYGWPKE---VPCTEESPLSGMSPYGRTKLFIEDICRDVQR--GDPE 173
Query: 182 --VITTRGNNVYG----------PNQFPEKLIPKFILLAMKGK-P-LPIHG------DGS 221
+I R N G P P L+P ++ + G+ P L I+G DG+
Sbjct: 174 WRIIMLRYFNPVGAHPSGRIGEDPCGTPNNLMP-YVQQVVVGRLPNLKIYGTDYTTKDGT 232
Query: 222 NVRSYLYCEDVAEAFDTILHK 242
VR Y++ D+A+ L K
Sbjct: 233 GVRDYIHVVDLADGHICALQK 253
>UNIPROTKB|Q9KV94 [details] [associations]
symbol:VC_0262 "UDP-glucose 4-epimerase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISS] [GO:0006012
"galactose metabolic process" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0044237
GO:GO:0003978 GO:GO:0006012 HOGENOM:HOG000167991 OMA:RRFVFIS
PIR:D82345 RefSeq:NP_229918.1 ProteinModelPortal:Q9KV94
DNASU:2614880 GeneID:2614880 KEGG:vch:VC0262 PATRIC:20079564
ProtClustDB:CLSK793549 Uniprot:Q9KV94
Length = 323
Score = 171 (65.3 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 78/334 (23%), Positives = 146/334 (43%)
Query: 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKG 65
TP IL+TGA+GF+ V + N Y +V + + + + ++PN + +
Sbjct: 7 TPLKILVTGASGFVGLRVLTQA-QNIG-YALVAQSRSQQPYSFEQVLLD-ITPNTDWERA 63
Query: 66 DVASADLVHFILLTEKIDTIMHFAAQTH-VDNSFGNSFEFTKN-NIYGTHVLLEACKITG 123
V +D ++H AA+ H + + ++ + ++ N GT L + G
Sbjct: 64 LVG-------------VDCVVHCAARVHQMQETEADALKAYRDVNTQGTLNLAKQAVSAG 110
Query: 124 QIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVI 183
+KRFI +S+ +V GE + H+ Q +P++PY +K AE ++ GL V+
Sbjct: 111 -VKRFIFLSSIKVNGEQTKAGSAFQHD-DQHIPSDPYGLSKYEAEQQLLELAAETGLEVV 168
Query: 184 TTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTIL-HK 242
R VYG L + K PLP+ G N+RS +Y +++ + H
Sbjct: 169 IIRPPLVYGEGVKANFL--SMMNWVKKQIPLPLGAVG-NMRSLVYLDNLVDLILVCCQHP 225
Query: 243 GEVGHVYNIGTKKERRVIDVATDICKLFSLNP------DTQIKFVEN---RPFNDQRYF- 292
G ++ + + + + I + + P T ++++ +P QR
Sbjct: 226 KAAGEIFLVSDNHDVSLTTLLRTIAQAMQIRPRLLPIPQTGLQWLLRLLGKPELGQRLCG 285
Query: 293 ---LDVQKL-KQLGWYERVTWEEGLQKTMKWYIS 322
LD+ K L W V++E+G+ +T+ +Y+S
Sbjct: 286 NLQLDIAHTQKTLHWSPPVSFEQGIARTVNFYLS 319
>TIGR_CMR|VC_0262 [details] [associations]
symbol:VC_0262 "UDP-glucose 4-epimerase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 HOGENOM:HOG000167991 OMA:RRFVFIS PIR:D82345
RefSeq:NP_229918.1 ProteinModelPortal:Q9KV94 DNASU:2614880
GeneID:2614880 KEGG:vch:VC0262 PATRIC:20079564
ProtClustDB:CLSK793549 Uniprot:Q9KV94
Length = 323
Score = 171 (65.3 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 78/334 (23%), Positives = 146/334 (43%)
Query: 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKG 65
TP IL+TGA+GF+ V + N Y +V + + + + ++PN + +
Sbjct: 7 TPLKILVTGASGFVGLRVLTQA-QNIG-YALVAQSRSQQPYSFEQVLLD-ITPNTDWERA 63
Query: 66 DVASADLVHFILLTEKIDTIMHFAAQTH-VDNSFGNSFEFTKN-NIYGTHVLLEACKITG 123
V +D ++H AA+ H + + ++ + ++ N GT L + G
Sbjct: 64 LVG-------------VDCVVHCAARVHQMQETEADALKAYRDVNTQGTLNLAKQAVSAG 110
Query: 124 QIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVI 183
+KRFI +S+ +V GE + H+ Q +P++PY +K AE ++ GL V+
Sbjct: 111 -VKRFIFLSSIKVNGEQTKAGSAFQHD-DQHIPSDPYGLSKYEAEQQLLELAAETGLEVV 168
Query: 184 TTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTIL-HK 242
R VYG L + K PLP+ G N+RS +Y +++ + H
Sbjct: 169 IIRPPLVYGEGVKANFL--SMMNWVKKQIPLPLGAVG-NMRSLVYLDNLVDLILVCCQHP 225
Query: 243 GEVGHVYNIGTKKERRVIDVATDICKLFSLNP------DTQIKFVEN---RPFNDQRYF- 292
G ++ + + + + I + + P T ++++ +P QR
Sbjct: 226 KAAGEIFLVSDNHDVSLTTLLRTIAQAMQIRPRLLPIPQTGLQWLLRLLGKPELGQRLCG 285
Query: 293 ---LDVQKL-KQLGWYERVTWEEGLQKTMKWYIS 322
LD+ K L W V++E+G+ +T+ +Y+S
Sbjct: 286 NLQLDIAHTQKTLHWSPPVSFEQGIARTVNFYLS 319
>TAIR|locus:2197264 [details] [associations]
symbol:GER1
""GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1""
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0006005 "L-fucose biosynthetic process"
evidence=IDA] [GO:0019853 "L-ascorbic acid biosynthetic process"
evidence=IMP] [GO:0050577 "GDP-L-fucose synthase activity"
evidence=IDA] InterPro:IPR001509 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0016853 EMBL:AC010556 EMBL:AK228837 EMBL:BT029480
EMBL:AF045286 EMBL:AB034806 IPI:IPI00540212 PIR:F96758
RefSeq:NP_177468.2 UniGene:At.1531 ProteinModelPortal:O49213
SMR:O49213 STRING:O49213 PaxDb:O49213 PRIDE:O49213
EnsemblPlants:AT1G73250.1 GeneID:843659 KEGG:ath:AT1G73250
GeneFarm:5162 TAIR:At1g73250 HOGENOM:HOG000168011 InParanoid:O49213
KO:K02377 OMA:DFISAMP ProtClustDB:PLN02725
BioCyc:ARA:AT1G73250-MONOMER BioCyc:MetaCyc:AT1G73250-MONOMER
Genevestigator:O49213 GermOnline:AT1G73250 GO:GO:0050577
GO:GO:0042351 GO:GO:0006005 Uniprot:O49213
Length = 323
Score = 171 (65.3 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 67/268 (25%), Positives = 126/268 (47%)
Query: 70 ADLVHFILLTEKIDTIMHFA--AQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
AD+ F + + I+ A H +N++ F I T+V+ A + G +K+
Sbjct: 58 ADVESFFSQEKPVYVILAAAKVGGIHANNTYPADFIGVNLQIQ-TNVIHSAYE-HG-VKK 114
Query: 128 FIHVSTDEVYGETDEDAVVGNHE-ASQLLPTNP-YSATKAGAEMLVMAYGRSYGLPVITT 185
+ + + +Y + + + + L PTN Y+ K AY +G I+
Sbjct: 115 LLFLGSSCIYPKFAPQPIPESALLTASLEPTNEWYAIAKIAGIKTCQAYRIQHGWDAISG 174
Query: 186 RGNNVYGPNQ-F-PEK--LIP----KFILLAMKG-KPLPIHGDGSNVRSYLYCEDVAEAF 236
N+YGPN F PE ++P +F + G + + + G GS +R +L+ +D+A+A
Sbjct: 175 MPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAEEVVVWGTGSPLREFLHVDDLADAC 234
Query: 237 DTILHK-GEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDV 295
+L + + HV NIG+ +E + ++A + ++ + ++ + +P R +D
Sbjct: 235 VFLLDRYSGLEHV-NIGSGQEVTIRELAELVKEVVGF--EGKLGWDCTKPDGTPRKLMDS 291
Query: 296 QKLKQLGWYERVTWEEGLQKTMKWYISN 323
KL LGW +V+ +GL +T WY+ N
Sbjct: 292 SKLASLGWTPKVSLRDGLSQTYDWYLKN 319
>SGD|S000000223 [details] [associations]
symbol:GAL10 "UDP-glucose-4-epimerase" species:4932
"Saccharomyces cerevisiae" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0004034 "aldose 1-epimerase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0006012 "galactose metabolic
process" evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IMP;IDA] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=IMP;IDA] [GO:0019318 "hexose metabolic
process" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0030246 "carbohydrate binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 UniPathway:UPA00214 UniPathway:UPA00242
InterPro:IPR016040 SGD:S000000223 GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0030246 EMBL:BK006936
GO:GO:0044237 SUPFAM:SSF74650 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Gene3D:2.70.98.10 eggNOG:COG2017 HOGENOM:HOG000247896 KO:K15917
OMA:CKDLWKW OrthoDB:EOG4NKG3T GO:GO:0004034 GO:GO:0033499
InterPro:IPR018052 PROSITE:PS00545 EMBL:Z35888 EMBL:X81324
EMBL:K02115 EMBL:M12348 EMBL:K01609 PIR:S45875 RefSeq:NP_009575.1
PDB:1Z45 PDBsum:1Z45 ProteinModelPortal:P04397 SMR:P04397
DIP:DIP-4891N MINT:MINT-526001 STRING:P04397 PeptideAtlas:P04397
PRIDE:P04397 EnsemblFungi:YBR019C GeneID:852307 KEGG:sce:YBR019C
CYGD:YBR019c GeneTree:ENSGT00530000063128 EvolutionaryTrace:P04397
NextBio:970981 Genevestigator:P04397 GermOnline:YBR019C
Uniprot:P04397
Length = 699
Score = 177 (67.4 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 77/258 (29%), Positives = 112/258 (43%)
Query: 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFK---- 61
T K +L+TG AG+I SH LI N Y VV D L SN + +RL K
Sbjct: 10 TSKIVLVTGGAGYIGSHTVVELIEN--GYDCVVADNL---SNSTYDSVARLEVLTKHHIP 64
Query: 62 FIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKI 121
F + D+ + + KID+++HFA V S + NNI GT VLLE +
Sbjct: 65 FYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQ- 123
Query: 122 TGQIKRFIHVSTDEVYGE-TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVM-AYG---R 176
+ +F+ S+ VYG+ T ++ E L PTNPY TK E ++ Y +
Sbjct: 124 QYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKK 183
Query: 177 SYGLPV------ITTRGNNVYG--PNQFPEKLIPKFILLAM-KGKPLPIHGDGSNVRSYL 227
S+ + I + + G P P L+P +A+ + + L I GD + R
Sbjct: 184 SWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGT 243
Query: 228 YCEDVAEAFDTILHKGEV 245
D D L KG +
Sbjct: 244 PIRDYIHVVD--LAKGHI 259
>ASPGD|ASPL0000073187 [details] [associations]
symbol:ugeA species:162425 "Emericella nidulans"
[GO:0006012 "galactose metabolic process" evidence=RCA;IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=RCA;IDA] [GO:0005622 "intracellular"
evidence=IDA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0042125 "protein
galactosylation" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:BN001303
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 OMA:ADKAWNA
ProteinModelPortal:C8VAU8 EnsemblFungi:CADANIAT00005702
Uniprot:C8VAU8
Length = 371
Score = 153 (58.9 bits), Expect = 9.5e-10, Sum P(2) = 9.5e-10
Identities = 51/167 (30%), Positives = 77/167 (46%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFK--FIKGD 66
++L+TG G+I S L+ YK+VV D L Y S+ + LN L K F + D
Sbjct: 5 SVLVTGGTGYIGSFTTLALLE--AGYKVVVADNL-YNSSAEALNRIELISGKKAEFAQLD 61
Query: 67 VASADLVHFILLTEK-IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQI 125
V + ID+++HFAA V S ++ N+YGT LL + + +
Sbjct: 62 VTDEAAFDKVFEAHPDIDSVIHFAALKAVGESGEKPLDYYHVNVYGTICLLRSM-VRHNV 120
Query: 126 KRFIHVSTDEVYGE-TDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 171
+ S+ VYG+ T ++ E L PTNPY TK E+ +
Sbjct: 121 TNIVFSSSATVYGDATRFPDMIPIPEHCPLGPTNPYGNTKFAIELAI 167
Score = 63 (27.2 bits), Expect = 9.5e-10, Sum P(2) = 9.5e-10
Identities = 31/144 (21%), Positives = 58/144 (40%)
Query: 193 PNQFPEKLIPKFILLAM-KGKPLPIHGD------GSNVRSYLYCEDVAEAFDTILH---K 242
P P L+P +A K + L + GD G+ +R Y++ D+A+ L+
Sbjct: 213 PQGVPYNLLPLLAQVATGKREKLLVFGDDYASHDGTAIRDYIHILDLADGHLKALNYLRA 272
Query: 243 GEVG-HVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLK-Q 300
G +N+GT + V ++ K ++ D + R + + + +
Sbjct: 273 NNPGVRAWNLGTGRGSTVYEMIRAFSK--AVGRDLPYEVAPRRAGDVLNLTSNPTRANTE 330
Query: 301 LGWYERVTWEEGLQKTMKWYISNP 324
LGW + T E+ + W +NP
Sbjct: 331 LGWKAQRTLEQACEDLWLWTKNNP 354
>TIGR_CMR|CBU_0676 [details] [associations]
symbol:CBU_0676 "NAD dependent epimerase/dehydratase"
species:227377 "Coxiella burnetii RSA 493" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GenomeReviews:AE016828_GR GO:GO:0044237 EMBL:AF387640
ProteinModelPortal:Q93N67 PRIDE:Q93N67 PATRIC:17930035
HOGENOM:HOG000168002 ProtClustDB:CLSK905415
BioCyc:CBUR227377:GJ7S-674-MONOMER Uniprot:Q93N67
Length = 337
Score = 170 (64.9 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 71/318 (22%), Positives = 145/318 (45%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
IL+TG AG++ S + +L+ Y++ V D L + + P +P ++GD+
Sbjct: 8 ILVTGGAGYVGSALVPQLLEL--GYRVTVYDTLFFGDDFL---PKE-NPYLNIVEGDIRD 61
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSFG-NSFEFTKNNIYGTHVLLEACKITGQIKRF 128
+ + + D ++ A ++ D SF + T N+ +++A K G +KRF
Sbjct: 62 TERLKQCF--KDADAVISLACISN-DASFELDETLSTSINLEAFEPMVKAAKAAG-VKRF 117
Query: 129 IHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGN 188
I+ S+ VYG ++ V H L+P Y+ K E L+ + +S +T R
Sbjct: 118 IYASSSSVYGVSETKDVTEEHP---LVPLTLYNKYKGMCEPLLFKH-QSPEFVCVTIRPA 173
Query: 189 NV--YGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE-- 244
+ Y P Q + + A+ + + G GS +R L+ +D+ + + +L +
Sbjct: 174 TLCGYAPRQRLDLSVNILTNHAVNNNKITVFG-GSQLRPNLHVQDMCDLYKLLLVVPDEK 232
Query: 245 -VGHVYNIGTKKERRVIDVATDICKLFSLN-PDTQIKFVENRPFNDQR-YFLDVQKLKQ- 300
G +N+G + + ++++A + + P+ + P +D R Y ++ K+K+
Sbjct: 233 IAGETFNVGYEN-KSIMEIAHIVKNIVEEEFPEKAPIDIVTAPTDDIRSYHINSDKIKRC 291
Query: 301 LGWYERVTWEEGLQKTMK 318
LG+ + + E+ ++ K
Sbjct: 292 LGFEAKYSIEDAVRDLCK 309
>DICTYBASE|DDB_G0281487 [details] [associations]
symbol:DDB_G0281487 "3-beta-hydroxysteroid
dehydrogenase" species:44689 "Dictyostelium discoideum" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0016616
"oxidoreductase activity, acting on the CH-OH group of donors, NAD
or NADP as acceptor" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 dictyBase:DDB_G0281487 eggNOG:COG0451
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
EMBL:AAFI02000041 KO:K07748 RefSeq:XP_640712.1
ProteinModelPortal:Q54TU9 STRING:Q54TU9 PRIDE:Q54TU9
EnsemblProtists:DDB0233059 GeneID:8623099 KEGG:ddi:DDB_G0281487
InParanoid:Q54TU9 OMA:HIVWGPG ProtClustDB:CLSZ2729041
Uniprot:Q54TU9
Length = 349
Score = 139 (54.0 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 44/155 (28%), Positives = 74/155 (47%)
Query: 82 IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETD 141
I T+ H A+ TH G ++ N + GT L+EAC G +K+ ++ S+ V
Sbjct: 64 ITTVFHTASPTH---GMGYDIYYSVN-VIGTERLIEACIKCG-VKQLVYTSSSSVVFN-G 117
Query: 142 EDAVVGNHEASQL-LPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKL 200
+D V G+ + +PY+ TK E V+ + L V R ++GP +
Sbjct: 118 KDIVNGDETLPYVDKHIDPYNKTKELGERAVLK-AKGSNLLVCALRPAGIFGPREVQGW- 175
Query: 201 IPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEA 235
P+F+ A +GK + GDG+N+ + Y ++V A
Sbjct: 176 -PQFLKAAKEGKNKFMFGDGNNLCDWTYIDNVVHA 209
Score = 66 (28.3 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 14/42 (33%), Positives = 27/42 (64%)
Query: 287 NDQRYFLDVQKLK-QLGWYERVTWEEGLQKTMKWYIS-NPDW 326
N RYF +++K K +L + V+ +G++KT +W++ NP +
Sbjct: 296 NSTRYF-NIEKAKKELKYKPIVSLRDGMEKTKEWFLQQNPSF 336
Score = 46 (21.3 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 20/86 (23%), Positives = 36/86 (41%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
K+ L+ G GF+ ++ L+ E + V D K+ R++ F GD+
Sbjct: 3 KSYLVVGGCGFLGRYIVESLLAR-GEKNVHVFDIR------KSFEDDRVT----FHIGDI 51
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTH 93
+ + + I T+ H A+ TH
Sbjct: 52 RKTEDLESAC--KGITTVFHTASPTH 75
>TAIR|locus:2150441 [details] [associations]
symbol:GME ""GDP-D-mannose 3',5'-epimerase"" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0047918 "GDP-mannose 3,5-epimerase activity" evidence=ISS;IDA]
[GO:0019853 "L-ascorbic acid biosynthetic process" evidence=TAS]
[GO:0051287 "NAD binding" evidence=TAS] [GO:0005829 "cytosol"
evidence=IDA] UniPathway:UPA00990 InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0451 Gene3D:3.40.50.720
GO:GO:0051287 GO:GO:0019853 EMBL:AF272706 EMBL:AY057660
EMBL:AY057694 EMBL:AY116953 IPI:IPI00536932 RefSeq:NP_001190417.1
RefSeq:NP_198236.1 UniGene:At.21733 PDB:2C54 PDB:2C59 PDB:2C5A
PDB:2C5E PDBsum:2C54 PDBsum:2C59 PDBsum:2C5A PDBsum:2C5E
ProteinModelPortal:Q93VR3 SMR:Q93VR3 STRING:Q93VR3 PaxDb:Q93VR3
PRIDE:Q93VR3 EnsemblPlants:AT5G28840.1 EnsemblPlants:AT5G28840.2
GeneID:833002 KEGG:ath:AT5G28840 TAIR:At5g28840
HOGENOM:HOG000168017 InParanoid:Q93VR3 KO:K10046 OMA:RKAQTST
PhylomeDB:Q93VR3 ProtClustDB:PLN02695 BioCyc:ARA:AT5G28840-MONOMER
BioCyc:MetaCyc:AT5G28840-MONOMER EvolutionaryTrace:Q93VR3
Genevestigator:Q93VR3 GermOnline:AT5G28840 GO:GO:0047918
Uniprot:Q93VR3
Length = 377
Score = 166 (63.5 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 79/322 (24%), Positives = 131/322 (40%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
I ITGA GFIASH+ RL + + ++ D + N +++ F + D+
Sbjct: 30 ISITGAGGFIASHIARRL--KHEGHYVIASD---WKKN-EHMTEDMFCDEFHLV--DLRV 81
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSF-GNSFEFTKNNIYGTHVLLEACKITGQIKRF 128
+ + + +TE +D + + AA N NN + ++EA +I G IKRF
Sbjct: 82 ME--NCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRF 138
Query: 129 IHVSTDEVYGETDE-DAVVGNHEASQLLPTNP---YSATKAGAEMLVMAYGRSYGLPVIT 184
+ S+ +Y E + + + + S P P Y K E L Y + +G+
Sbjct: 139 FYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAYGLEKLATEELCKHYNKDFGIECRI 198
Query: 185 TRGNNVYGP----NQFPEKLIPKFILLAMKGKP-LPIHGDGSNVRSYLYCEDVAEAFDTI 239
R +N+YGP EK F A + GDG RS+ + ++ E
Sbjct: 199 GRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGV-LR 257
Query: 240 LHKGEVGHVYNIGTKKERRVIDVATDICKLFSLN-PDTQIKFVEN-RPFNDQRYFLDVQK 297
L K + NIG+ + + ++A + P I E R N +
Sbjct: 258 LTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPEGVRGRNSDNNLIK--- 314
Query: 298 LKQLGWYERVTWEEGLQKTMKW 319
++LGW + +EGL+ T W
Sbjct: 315 -EKLGWAPNMRLKEGLRITYFW 335
>TIGR_CMR|CPS_0589 [details] [associations]
symbol:CPS_0589 "sugar epimerase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0005975
"carbohydrate metabolic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0044237 RefSeq:YP_267339.1
ProteinModelPortal:Q489C5 STRING:Q489C5 GeneID:3522305
KEGG:cps:CPS_0589 PATRIC:21464507 HOGENOM:HOG000167991 OMA:CAARAHI
BioCyc:CPSY167879:GI48-676-MONOMER Uniprot:Q489C5
Length = 321
Score = 164 (62.8 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 65/227 (28%), Positives = 100/227 (44%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
I ITGA GF+ + L + + I + L+NL+ + N + GD+
Sbjct: 3 IAITGATGFLGKPLTKELSERFCDDSIAPI--------LRNLSQEFNNVNC-IVVGDIGP 53
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNS--FEFTKNNIYGTHVLLEACKITGQIKR 127
+ + E I ++H AA+ HV N F + N+ GT V +A +G +KR
Sbjct: 54 --MTDWSNKLEDIGCVIHCAARVHVMNEKNEDPLDAFREVNVRGTLVFAKAAAKSG-VKR 110
Query: 128 FIHVSTDEVYGE--TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 185
FI VS+ +V GE T + + E S P +PY +K+ AE + G+ V+
Sbjct: 111 FIFVSSIKVNGESTTSKKPYKNSDEPS---PKDPYGISKSEAEAGLKLIADETGMEVVII 167
Query: 186 RGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDV 232
R VYGP + + A G PLP N RS +Y E++
Sbjct: 168 RPPLVYGPGV--KANFAAMLKFASTGIPLPFGCISHNKRSMVYVENL 212
>UNIPROTKB|P72586 [details] [associations]
symbol:rfbD "GDP-D-mannose dehydratase" species:1111708
"Synechocystis sp. PCC 6803 substr. Kazusa" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005622 EMBL:BA000022 GenomeReviews:BA000022_GR
GO:GO:0019673 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 HSSP:P32054 PIR:S74433
RefSeq:NP_439905.1 RefSeq:YP_005649960.1 ProteinModelPortal:P72586
SMR:P72586 IntAct:P72586 STRING:P72586 GeneID:12255298
GeneID:951882 KEGG:syn:sll1212 KEGG:syy:SYNGTS_0007 PATRIC:23836866
ProtClustDB:CLSK892430 Uniprot:P72586
Length = 362
Score = 165 (63.1 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 81/319 (25%), Positives = 129/319 (40%)
Query: 8 KNILITGAAGFIASHVCNRLIGN-YPEYKIVVLDKLDYCSNLKNL--NPSRLSPNFKFIK 64
K +L+TG G S++ L+ Y + I+ + +L +P L +
Sbjct: 5 KVVLLTGITGQDGSYLSELLLEKGYQVHGIIRRTSTFNTDRIDHLYVDPHDLEAKLRLHY 64
Query: 65 GDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNI-YGTHVLLEACKI-- 121
GD+ + IL K I + AQ+HV SF +S E+T +++ GT LLEA +
Sbjct: 65 GDLTDGTTLRRILEDVKPTEIYNLGAQSHVRVSF-DSPEYTVDSVAMGTLRLLEAIRDYQ 123
Query: 122 --TGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG 179
TG RF + E++G+ E + E + P +PY+ K + Y SY
Sbjct: 124 HRTGIQVRFYQAGSSEMFGKVQE---IPQKETTPFYPRSPYACAKVYGHWQTVNYRESYD 180
Query: 180 LPVITTRGNNVYGPNQ---FPEKLIPKFILLAMKGKPLPIH-GDGSNVRSYLYCEDVAEA 235
L N P + F + I + I + G ++ G+ + R + Y +D A
Sbjct: 181 LFACNGILFNHESPRRGETFVTRKITRAIARIVAGTQKKLYLGNIDSKRDWGYAKDYVRA 240
Query: 236 FDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVEN--RPFNDQRYFL 293
+L + E Y + T + V + +LN + F E RP
Sbjct: 241 MWAMLQQ-EQPDDYVVATGETHEVKEFLEIAFGYVNLNWQNYVAFDERYLRPAEVDLLIG 299
Query: 294 DVQKLK-QLGWYERVTWEE 311
D K K QLGW VT+ E
Sbjct: 300 DPAKTKAQLGWEPSVTFTE 318
>UNIPROTKB|C9JCB7 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005739 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:AC018878 HOGENOM:HOG000168004
HGNC:HGNC:17729 IPI:IPI00916638 ProteinModelPortal:C9JCB7
SMR:C9JCB7 STRING:C9JCB7 PRIDE:C9JCB7 Ensembl:ENST00000416298
ArrayExpress:C9JCB7 Bgee:C9JCB7 Uniprot:C9JCB7
Length = 134
Score = 145 (56.1 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 40/133 (30%), Positives = 63/133 (47%)
Query: 100 NSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNH--EASQLLPT 157
N + K N GT +L K G R + ST EVYG+ + ++ + + P
Sbjct: 3 NPIKTLKTNTIGTLNMLGLAKRVGA--RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPR 60
Query: 158 NPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE--KLIPKFILLAMKGKPLP 215
Y K AE + AY + G+ V R N +GP +++ FIL A++G+PL
Sbjct: 61 ACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLT 120
Query: 216 IHGDGSNVRSYLY 228
++G GS R++ Y
Sbjct: 121 VYGSGSQTRAFQY 133
>TAIR|locus:2119161 [details] [associations]
symbol:FLDH "farnesol dehydrogenase" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006721 "terpenoid
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005773 "vacuole" evidence=IDA] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009788 "negative regulation of abscisic acid mediated
signaling pathway" evidence=IMP] [GO:0016487 "farnesol metabolic
process" evidence=IDA] [GO:0047886 "farnesol dehydrogenase
activity" evidence=IDA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] [GO:0009853 "photorespiration" evidence=RCA]
[GO:0034976 "response to endoplasmic reticulum stress"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005783 GO:GO:0005886 GO:GO:0005774 EMBL:CP002687
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AL035678
EMBL:AL161583 GO:GO:0009788 UniGene:At.46532 UniGene:At.66644
UniGene:At.68114 GO:GO:0016487 EMBL:AF370578 EMBL:BT002342
IPI:IPI00530523 PIR:T05987 RefSeq:NP_195062.1 HSSP:Q8T8E9
ProteinModelPortal:Q9SZB3 SMR:Q9SZB3 IntAct:Q9SZB3 STRING:Q9SZB3
PRIDE:Q9SZB3 EnsemblPlants:AT4G33360.1 GeneID:829473
KEGG:ath:AT4G33360 TAIR:At4g33360 HOGENOM:HOG000168005
InParanoid:Q9SZB3 KO:K15891 OMA:EVELAYG PhylomeDB:Q9SZB3
ProtClustDB:CLSN2685493 ArrayExpress:Q9SZB3 Genevestigator:Q9SZB3
GO:GO:0047886 Uniprot:Q9SZB3
Length = 344
Score = 164 (62.8 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 58/242 (23%), Positives = 104/242 (42%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
IL+TG+ G++ + +C+ L+ + +V D S L P + GDV
Sbjct: 15 ILVTGSTGYLGARLCHVLLRRGHSVRALVRRTSDL---------SDLPPEVELAYGDVT- 64
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFI 129
D D + H AA V+ + F N+ G +LEA K T +++ I
Sbjct: 65 -DYRSLTDACSGCDIVFHAAAL--VEPWLPDPSRFISVNVGGLKNVLEAVKETKTVQKII 121
Query: 130 HVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNN 189
+ S+ G TD N ++ Y +KA A+ + + S G+P+I
Sbjct: 122 YTSSFFALGSTDGSVANENQVHNERFFCTEYERSKAVADKMALN-AASEGVPIILLYPGV 180
Query: 190 VYGPNQFPE-KLIPKFILLAMKGKPLPIH-GDGSNVRSYLYCEDVAEAFDTILHKGEVGH 247
++GP + ++ + ++ G+ LP + G G++ S+ + +DV E + KG +G
Sbjct: 181 IFGPGKLTSANMVARMLIERFNGR-LPGYIGSGTDRYSFSHVDDVVEGHVAAMEKGRLGE 239
Query: 248 VY 249
Y
Sbjct: 240 RY 241
>UNIPROTKB|Q4K6F9 [details] [associations]
symbol:rfbG "CDP-glucose-4,6-dehydratase" species:220664
"Pseudomonas protegens Pf-5" [GO:0009243 "O antigen biosynthetic
process" evidence=ISS] [GO:0047733 "CDP-glucose 4,6-dehydratase
activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0009243
RefSeq:YP_262174.1 ProteinModelPortal:Q4K6F9 SMR:Q4K6F9
STRING:Q4K6F9 GeneID:3479503 KEGG:pfl:PFL_5095 PATRIC:19879659
HOGENOM:HOG000167999 KO:K01709 OMA:KCYENKE ProtClustDB:CLSK715086
BioCyc:PFLU220664:GIX8-5136-MONOMER GO:GO:0047733
InterPro:IPR013445 PANTHER:PTHR10366:SF33 TIGRFAMs:TIGR02622
Uniprot:Q4K6F9
Length = 361
Score = 164 (62.8 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 60/270 (22%), Positives = 118/270 (43%)
Query: 65 GDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQ 124
GD+ + ++ D ++H AAQ V S+ E N+ GT +LEA ++
Sbjct: 67 GDIRDLQAITHSMVGFNPDVLIHMAAQPLVRLSYREPLETYATNVMGTLHVLEAARLCPN 126
Query: 125 IKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY-GLP-- 181
++ ++V+TD+ Y + + G E + +PYS +K E++ +Y S+ P
Sbjct: 127 LRAIVNVTTDKCYENREWEW--GYREDEPMGGHDPYSNSKGCVELITASYRNSFFNTPQA 184
Query: 182 --VITTRGNNVYGPNQFPE-KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDT 238
+ + R NV G + E +LIP + KG+P+ + + R + + + +
Sbjct: 185 AALASARAGNVIGGGDWAEDRLIPDILRAFEKGQPVTVRNPQAT-RPWQHVLEPLSGYLV 243
Query: 239 IL-HKGEVGHVY----NIGTKKE-RRVID-VATDICKLFSLNPDTQIKFVENRPFNDQRY 291
+ H + GH + N G K E R ++ + + + Q+ ++ P
Sbjct: 244 LAEHLWKNGHQFAQGWNFGPKDEDARPVEWILNYMVDSWGDGAHWQLDR-DSHPHEANYL 302
Query: 292 FLDVQKLK-QLGWYERVTWEEGLQKTMKWY 320
LD+ K + +L W E+ L + ++W+
Sbjct: 303 KLDISKARARLNWAPTWNLEKTLSRIVQWH 332
>UNIPROTKB|O05349 [details] [associations]
symbol:RfbU "Mannosyl-transferase" species:666 "Vibrio
cholerae" [GO:0000030 "mannosyltransferase activity" evidence=ISS]
[GO:0009243 "O antigen biosynthetic process" evidence=ISS]
InterPro:IPR003869 Pfam:PF02719 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GenomeReviews:AE003852_GR GO:GO:0000030
GO:GO:0009243 EMBL:Y07788 PIR:B82345 ProteinModelPortal:O05349
DNASU:2614878 PATRIC:20079562 ProtClustDB:CLSK793548 Uniprot:O05349
Length = 621
Score = 143 (55.4 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 40/144 (27%), Positives = 70/144 (48%)
Query: 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPS------RLSPN 59
T K++++TGA G I S +C +++ P+ +V+ + +Y NL ++ L N
Sbjct: 280 TEKSVMVTGAGGSIGSELCRQILAQKPK-TLVLFELNEY--NLYTIDQELQAIKQNLKLN 336
Query: 60 FKFIK--GDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLE 117
K + G V + V ++ +++T+ H AA HV N E +NN++GT
Sbjct: 337 TKIVAALGSVQRENRVKKLMQAHQVETVYHAAAYKHVPLVEDNVIEGIRNNVFGTLACAN 396
Query: 118 ACKITGQIKRFIHVSTDEVYGETD 141
A I +K F +STD+ T+
Sbjct: 397 AA-IEAGVKNFTLISTDKAVRPTN 419
Score = 72 (30.4 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 34/144 (23%), Positives = 61/144 (42%)
Query: 156 PTNPYSATKAGAEMLVMAYGRSYGLPVIT-TRGNNVYGPNQFPEKLIPKFILLAMKGKPL 214
PTN A+K AE+++ A + T R NV G + ++P F G P+
Sbjct: 417 PTNIMGASKRMAELVLQALADKNSTTIFTMVRFGNVLGSSG---SVVPLFKKQIRAGGPV 473
Query: 215 PI-HGDGSNVRSYLYCEDVAEAFDTILHKGEVGH---VYNIGTKKERRVIDVATDICKLF 270
+ H D +R ++ + EA ++ G + H V+ + + +++D+A + L
Sbjct: 474 TVTHPD--IIRYFML---IPEAAQLVIQAGAMSHNGQVFVLDMGEPVKIVDLAKRMIHLM 528
Query: 271 SLNP---------DTQIKFVENRP 285
+ D +IKF RP
Sbjct: 529 GMKEFCDGRSDEGDIEIKFTGLRP 552
>TIGR_CMR|VC_0260 [details] [associations]
symbol:VC_0260 "mannosyl-transferase" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0000030 "mannosyltransferase
activity" evidence=ISS] [GO:0009243 "O antigen biosynthetic
process" evidence=ISS] InterPro:IPR003869 Pfam:PF02719
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GenomeReviews:AE003852_GR GO:GO:0000030 GO:GO:0009243 EMBL:Y07788
PIR:B82345 ProteinModelPortal:O05349 DNASU:2614878 PATRIC:20079562
ProtClustDB:CLSK793548 Uniprot:O05349
Length = 621
Score = 143 (55.4 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 40/144 (27%), Positives = 70/144 (48%)
Query: 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPS------RLSPN 59
T K++++TGA G I S +C +++ P+ +V+ + +Y NL ++ L N
Sbjct: 280 TEKSVMVTGAGGSIGSELCRQILAQKPK-TLVLFELNEY--NLYTIDQELQAIKQNLKLN 336
Query: 60 FKFIK--GDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLE 117
K + G V + V ++ +++T+ H AA HV N E +NN++GT
Sbjct: 337 TKIVAALGSVQRENRVKKLMQAHQVETVYHAAAYKHVPLVEDNVIEGIRNNVFGTLACAN 396
Query: 118 ACKITGQIKRFIHVSTDEVYGETD 141
A I +K F +STD+ T+
Sbjct: 397 AA-IEAGVKNFTLISTDKAVRPTN 419
Score = 72 (30.4 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 34/144 (23%), Positives = 61/144 (42%)
Query: 156 PTNPYSATKAGAEMLVMAYGRSYGLPVIT-TRGNNVYGPNQFPEKLIPKFILLAMKGKPL 214
PTN A+K AE+++ A + T R NV G + ++P F G P+
Sbjct: 417 PTNIMGASKRMAELVLQALADKNSTTIFTMVRFGNVLGSSG---SVVPLFKKQIRAGGPV 473
Query: 215 PI-HGDGSNVRSYLYCEDVAEAFDTILHKGEVGH---VYNIGTKKERRVIDVATDICKLF 270
+ H D +R ++ + EA ++ G + H V+ + + +++D+A + L
Sbjct: 474 TVTHPD--IIRYFML---IPEAAQLVIQAGAMSHNGQVFVLDMGEPVKIVDLAKRMIHLM 528
Query: 271 SLNP---------DTQIKFVENRP 285
+ D +IKF RP
Sbjct: 529 GMKEFCDGRSDEGDIEIKFTGLRP 552
>TAIR|locus:2030973 [details] [associations]
symbol:GER2 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0042350 "GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0006857 "oligopeptide transport" evidence=RCA]
InterPro:IPR001509 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AC034106 GO:GO:0016853 HOGENOM:HOG000168011 KO:K02377
ProtClustDB:PLN02725 GO:GO:0050577 GO:GO:0042351 EMBL:AY063880
EMBL:AY096364 IPI:IPI00526329 PIR:B86314 RefSeq:NP_564040.1
UniGene:At.15825 ProteinModelPortal:Q9LMU0 SMR:Q9LMU0 STRING:Q9LMU0
PaxDb:Q9LMU0 PRIDE:Q9LMU0 EnsemblPlants:AT1G17890.1 GeneID:838368
KEGG:ath:AT1G17890 GeneFarm:5163 TAIR:At1g17890 InParanoid:Q9LMU0
OMA:IHCAGRV PhylomeDB:Q9LMU0 Genevestigator:Q9LMU0
GermOnline:AT1G17890 Uniprot:Q9LMU0
Length = 328
Score = 161 (61.7 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 64/273 (23%), Positives = 124/273 (45%)
Query: 66 DVASADLVHFILLTEKIDTIMHFAAQT---HVDNSFGNSFEFTKNNIYGTHVLLEACKIT 122
D+ S V TEK ++ AA+ H +N++ F I T+V+ A T
Sbjct: 56 DLTSQSDVESFFATEKPVYVILAAAKVGGIHANNTYPADFIGVNLQIQ-TNVIHSA--YT 112
Query: 123 GQIKRFIHVSTDEVYGETDEDAVVGNHEAS-QLLPTNP-YSATKAGAEMLVMAYGRSYGL 180
+K+ + + + +Y + + + + L PTN Y+ K + AY +
Sbjct: 113 HGVKKLLFLGSSCIYPKFAPQPIPESALLTGPLEPTNEWYAIAKIAGIKMCQAYRLQHQW 172
Query: 181 PVITTRGNNVYGPNQ-F-PEK--LIPKFILLAMKGKP-----LPIHGDGSNVRSYLYCED 231
I+ N+YG N F PE ++P + + K + + G GS +R +L+ +D
Sbjct: 173 DAISGMPTNLYGQNDNFHPENSHVLPALMRRFHEAKANNADEVVVWGSGSPLREFLHVDD 232
Query: 232 VAEAFDTILHK-GEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQR 290
+A+A ++ + HV N+G+ E + ++A + ++ ++ + +P R
Sbjct: 233 LADACVFLMDQYSGFEHV-NVGSGVEVTIKELAELVKEVVGFKG--KLVWDTTKPDGTPR 289
Query: 291 YFLDVQKLKQLGWYERVTWEEGLQKTMKWYISN 323
+D KL LGW +++ ++GL +T +WY+ N
Sbjct: 290 KLMDSSKLASLGWTPKISLKDGLSQTYEWYLEN 322
>ZFIN|ZDB-GENE-060421-6479 [details] [associations]
symbol:gale "UDP-galactose-4-epimerase"
species:7955 "Danio rerio" [GO:0016857 "racemase and epimerase
activity, acting on carbohydrates and derivatives" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016853 "isomerase activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 ZFIN:ZDB-GENE-060421-6479 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 GeneTree:ENSGT00530000063128
EMBL:CR391986 IPI:IPI00758807 Ensembl:ENSDART00000135569
ArrayExpress:F1Q5H4 Bgee:F1Q5H4 Uniprot:F1Q5H4
Length = 350
Score = 121 (47.7 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 43/170 (25%), Positives = 71/170 (41%)
Query: 8 KNILITGAAGFIASHVCNRLI--GNYP----EYKIVVLDKLDYCSNLKNLNPSRLSPNFK 61
+ IL+TG G+I SH LI G +P + V + D +L+ + + +
Sbjct: 3 QKILVTGGGGYIGSHCVVELIEAGFHPVVIDNFSNAVRGEGDVPESLRRIEKF-MDTQIE 61
Query: 62 FIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKI 121
F + D+ + I +MHFA V S + + N+ GT LLE +
Sbjct: 62 FHELDLLDKPGLEKIFKMHSFYAVMHFAGLKAVGESVEQPLRYYRVNLTGTINLLEVMQS 121
Query: 122 TGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 171
G ++ + S+ VYG+ + + H TNPY TK E ++
Sbjct: 122 HG-VRNLVFSSSATVYGDPQKLPIDEQHPVGGC--TNPYGKTKYFIEEMI 168
Score = 86 (35.3 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 36/143 (25%), Positives = 57/143 (39%)
Query: 193 PNQFPEKLIPKFILLAM-KGKPLPIHG------DGSNVRSYLYCEDVAEAFDTILHK--G 243
P P L+P +A+ + K L + G DG+ VR Y++ D+A+ + K
Sbjct: 201 PQGIPNNLLPYVAQVAIGRRKHLNVFGNDYSTPDGTGVRDYIHVVDLAKGHIAAVRKLKD 260
Query: 244 EVG-HVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKL-KQL 301
G VYN+GT V+ + + + K QI R + + D K+L
Sbjct: 261 SCGCKVYNLGTGTGYSVLQMVSAMEKASGRKIAYQI--APRRSGDVASCYADASLAEKEL 318
Query: 302 GWYERVTWEEGLQKTMKWYISNP 324
GW E + +W NP
Sbjct: 319 GWKAEFDLERMCEDLWRWQSQNP 341
>UNIPROTKB|G4MZC9 [details] [associations]
symbol:MGG_11399 "Sterol-4-alpha-carboxylate
3-dehydrogenase" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR002225
Pfam:PF01073 InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0006696 EMBL:CM001232
KO:K07748 GO:GO:0000252 RefSeq:XP_003713491.1
ProteinModelPortal:G4MZC9 EnsemblFungi:MGG_11399T0 GeneID:5051352
KEGG:mgr:MGG_11399 Uniprot:G4MZC9
Length = 371
Score = 157 (60.3 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 54/237 (22%), Positives = 100/237 (42%)
Query: 3 TVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDY-CSNLKNLNPSRLSPNFK 61
T + ++L+ G GF+ SH+ L+ +YK + +D C+ + +
Sbjct: 6 TKFNLGSVLVVGGCGFLGSHIVRMLLD---DYKCSAVSAVDLRCTRNRR-------EGVQ 55
Query: 62 FIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKI 121
+ D+ +A+ + + + D ++H A+ NS + F K N+ GT ++EACK
Sbjct: 56 YHDADITNAERLVSVFDEVRPDVVIHTASPLAQGNSVVHRDIFYKVNVEGTRTVVEACKK 115
Query: 122 TGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLL---PTNPYSATKAGAEMLVMAYGRSY 178
G +K + S+ V + D + + + T YS TKA AE +V+
Sbjct: 116 AG-VKALVFTSSASVISDNVSDLINADERWPMIRGDKQTEYYSDTKAEAEEIVLKANEPG 174
Query: 179 GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEA 235
L R + ++G + + +GK GD +N+ + Y +VA A
Sbjct: 175 KLLTAAIRPSGIFGEGD--SMVTANLVKTYREGKWKVQVGDNNNLFDFTYAGNVAHA 229
Score = 47 (21.6 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 11/33 (33%), Positives = 23/33 (69%)
Query: 290 RYFLDVQKLKQ-LGWYERVTWEEGLQKTMKWYI 321
RY+ ++ K KQ LG+ V+ EEG+++ +++ +
Sbjct: 329 RYY-NITKAKQRLGYAPIVSMEEGVRRGVQYIL 360
>UNIPROTKB|Q06952 [details] [associations]
symbol:rfbD "Probable GDP-mannose 4,6-dehydratase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0009103 GO:GO:0019673
GO:GO:0042351 EMBL:X59554 PIR:S28470 RefSeq:NP_229900.1
ProteinModelPortal:Q06952 SMR:Q06952 DNASU:2614706 GeneID:2614706
KEGG:vch:VC0243 PATRIC:20079530 eggNOG:COG1089 KO:K01711
OMA:INPKYFR ProtClustDB:CLSK793536 BioCyc:MetaCyc:MONOMER-13574
GO:GO:0008446 TIGRFAMs:TIGR01472 Uniprot:Q06952
Length = 373
Score = 159 (61.0 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 55/179 (30%), Positives = 82/179 (45%)
Query: 8 KNILITGAAGFIASHVCNRLIGN-YPEYKIVVLDKLDYCSNLKNL--NPSRLSPNFKFIK 64
K LITG G S++ L+ Y + I L + +L +P NFK
Sbjct: 4 KVALITGITGQDGSYLAEFLLEKGYEVHGIKRRSSLFNTQRVDHLYKDPHEEDVNFKLHY 63
Query: 65 GDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEACKITG 123
GD+ + + IL + D + + AQ+HV SF S E+T + + GT LLEA + G
Sbjct: 64 GDLTDSSNLTRILAEVQPDEVYNLGAQSHVAVSF-QSPEYTADVDAIGTLRLLEAIRFLG 122
Query: 124 QIKR--FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 180
K+ F ST E+YG E + E + P +PY+ K A + + Y SYG+
Sbjct: 123 LTKKTKFYQASTSELYGLVQE---IPQKETTPFYPRSPYAVAKMYAYWITINYRESYGI 178
>TIGR_CMR|VC_0243 [details] [associations]
symbol:VC_0243 "GDP-mannose 4,6-dehydratase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0009103 GO:GO:0019673
GO:GO:0042351 EMBL:X59554 PIR:S28470 RefSeq:NP_229900.1
ProteinModelPortal:Q06952 SMR:Q06952 DNASU:2614706 GeneID:2614706
KEGG:vch:VC0243 PATRIC:20079530 eggNOG:COG1089 KO:K01711
OMA:INPKYFR ProtClustDB:CLSK793536 BioCyc:MetaCyc:MONOMER-13574
GO:GO:0008446 TIGRFAMs:TIGR01472 Uniprot:Q06952
Length = 373
Score = 159 (61.0 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 55/179 (30%), Positives = 82/179 (45%)
Query: 8 KNILITGAAGFIASHVCNRLIGN-YPEYKIVVLDKLDYCSNLKNL--NPSRLSPNFKFIK 64
K LITG G S++ L+ Y + I L + +L +P NFK
Sbjct: 4 KVALITGITGQDGSYLAEFLLEKGYEVHGIKRRSSLFNTQRVDHLYKDPHEEDVNFKLHY 63
Query: 65 GDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEACKITG 123
GD+ + + IL + D + + AQ+HV SF S E+T + + GT LLEA + G
Sbjct: 64 GDLTDSSNLTRILAEVQPDEVYNLGAQSHVAVSF-QSPEYTADVDAIGTLRLLEAIRFLG 122
Query: 124 QIKR--FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 180
K+ F ST E+YG E + E + P +PY+ K A + + Y SYG+
Sbjct: 123 LTKKTKFYQASTSELYGLVQE---IPQKETTPFYPRSPYAVAKMYAYWITINYRESYGI 178
>UNIPROTKB|Q5HTB4 [details] [associations]
symbol:flmA "Polysaccharide biosynthesis protein"
species:195099 "Campylobacter jejuni RM1221" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR003869 Pfam:PF02719
InterPro:IPR016040 GO:GO:0009058 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:CP000025 GenomeReviews:CP000025_GR eggNOG:COG1086
HOGENOM:HOG000257079 OMA:ICIHAAA InterPro:IPR020025
TIGRFAMs:TIGR03589 RefSeq:YP_179471.1 ProteinModelPortal:Q5HTB4
SMR:Q5HTB4 STRING:Q5HTB4 GeneID:3232117 KEGG:cjr:CJE1485
PATRIC:20044764 KO:K15894 ProtClustDB:CLSK879183
BioCyc:CJEJ195099:GJC0-1514-MONOMER Uniprot:Q5HTB4
Length = 334
Score = 137 (53.3 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 40/132 (30%), Positives = 63/132 (47%)
Query: 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFI 63
++ KNILITG G L+ NY KI++ + D + + S FI
Sbjct: 1 MFNKKNILITGGTGSFGKTYTKVLLENYKPNKIIIYSR-DELKQFEMASVFNASCMRYFI 59
Query: 64 KGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITG 123
GDV + + + +D ++H AA HV + N E K NI+G +++AC G
Sbjct: 60 -GDVRDKERLSTAM--RDVDFVIHAAAMKHVPIAEYNPMECIKTNIHGAQNVIDACFENG 116
Query: 124 QIKRFIHVSTDE 135
+K+ I +STD+
Sbjct: 117 -VKKCIALSTDK 127
Score = 65 (27.9 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 31/98 (31%), Positives = 42/98 (42%)
Query: 156 PTNPYSATKAGAEMLVMAYGRSYGLPVI---TTRGNNVYGPNQFPEKLIPKFILLAMKG- 211
P N Y ATK ++ L +A G TR NV G ++P F L +G
Sbjct: 131 PVNLYGATKLASDKLFVAANNIAGNKQTRFGVTRYGNVVGSRG---SVVPFFKKLISEGA 187
Query: 212 KPLPIHGDGSNVRSYLYCED----VAEAFDTILHKGEV 245
K LPI D R ++ ED V F+ +H GE+
Sbjct: 188 KELPIT-DTRMTRFWISLEDGVKFVLSNFER-MHGGEI 223
>TIGR_CMR|CJE_1485 [details] [associations]
symbol:CJE_1485 "polysaccharide biosynthesis protein"
species:195099 "Campylobacter jejuni RM1221" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR003869 Pfam:PF02719
InterPro:IPR016040 GO:GO:0009058 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:CP000025 GenomeReviews:CP000025_GR eggNOG:COG1086
HOGENOM:HOG000257079 OMA:ICIHAAA InterPro:IPR020025
TIGRFAMs:TIGR03589 RefSeq:YP_179471.1 ProteinModelPortal:Q5HTB4
SMR:Q5HTB4 STRING:Q5HTB4 GeneID:3232117 KEGG:cjr:CJE1485
PATRIC:20044764 KO:K15894 ProtClustDB:CLSK879183
BioCyc:CJEJ195099:GJC0-1514-MONOMER Uniprot:Q5HTB4
Length = 334
Score = 137 (53.3 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 40/132 (30%), Positives = 63/132 (47%)
Query: 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFI 63
++ KNILITG G L+ NY KI++ + D + + S FI
Sbjct: 1 MFNKKNILITGGTGSFGKTYTKVLLENYKPNKIIIYSR-DELKQFEMASVFNASCMRYFI 59
Query: 64 KGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITG 123
GDV + + + +D ++H AA HV + N E K NI+G +++AC G
Sbjct: 60 -GDVRDKERLSTAM--RDVDFVIHAAAMKHVPIAEYNPMECIKTNIHGAQNVIDACFENG 116
Query: 124 QIKRFIHVSTDE 135
+K+ I +STD+
Sbjct: 117 -VKKCIALSTDK 127
Score = 65 (27.9 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 31/98 (31%), Positives = 42/98 (42%)
Query: 156 PTNPYSATKAGAEMLVMAYGRSYGLPVI---TTRGNNVYGPNQFPEKLIPKFILLAMKG- 211
P N Y ATK ++ L +A G TR NV G ++P F L +G
Sbjct: 131 PVNLYGATKLASDKLFVAANNIAGNKQTRFGVTRYGNVVGSRG---SVVPFFKKLISEGA 187
Query: 212 KPLPIHGDGSNVRSYLYCED----VAEAFDTILHKGEV 245
K LPI D R ++ ED V F+ +H GE+
Sbjct: 188 KELPIT-DTRMTRFWISLEDGVKFVLSNFER-MHGGEI 223
>DICTYBASE|DDB_G0276473 [details] [associations]
symbol:DDB_G0276473 "NAD-dependent
epimerase/dehydratase family protein" species:44689 "Dictyostelium
discoideum" [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 dictyBase:DDB_G0276473
GO:GO:0045335 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:AAFI02000015 eggNOG:COG1088
OMA:ETMKLLW RefSeq:XP_643167.1 ProteinModelPortal:Q86HU8
PRIDE:Q86HU8 EnsemblProtists:DDB0234265 GeneID:8620575
KEGG:ddi:DDB_G0276473 InParanoid:Q86HU8 ProtClustDB:CLSZ2430901
Uniprot:Q86HU8
Length = 363
Score = 162 (62.1 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 71/275 (25%), Positives = 127/275 (46%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDK-LDYCSNL--KNLNPSRLSPNFKFIKG 65
N+LI G GFI ++ L+ KI V DK L + L K+L + P+ ++++G
Sbjct: 5 NVLILGGVGFIGRNLVQYLVEQKCCNKIRVADKVLPATAFLGAKHLE-AFADPSVEYMQG 63
Query: 66 DVASADLVH--FILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHV--LLEACKI 121
++ASA + F L K + + + A +T +G + +Y V EA K+
Sbjct: 64 NLASAASITKCFTLEGGKFNIVFNLAGET----KYGQTDAVYNEKVYDVSVKCATEAAKV 119
Query: 122 TGQIKRFIHVSTDEVYGETDEDAVVGNH-EASQLLPTNPYSATKAGAEMLVMAYGRSYGL 180
G + +FI VST ++Y + + G+ + L+ ++ A KA E+ GL
Sbjct: 120 -G-VDKFIEVSTAQIYSSNKKPSKEGDKTDPWTLIASHKLKAEKALKEI--------NGL 169
Query: 181 PVITTRGNNVYGPNQFPEKLIPKFILLAM---KGKPLPIHGDGSNVRSYLYCEDVAEAFD 237
+I R + VYGP + P+ I A+ + + DG + ++ DV +A
Sbjct: 170 NLIIVRPSVVYGPGDILG-ISPRIITGAVYKHTNEKMKFLWDGDLKYNTVHVNDVCKALW 228
Query: 238 TILHKGEVGHVYNIGTKKERRVIDVATDICKLFSL 272
+ G+VG VYN+ K + ++ + K+F++
Sbjct: 229 FLSQNGKVGDVYNLSDKGDTDAQTISKILEKIFAI 263
Score = 39 (18.8 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 392 RTGWIGGLLSKICEKK 407
+TG++G +LS + K
Sbjct: 264 KTGFVGNMLSNVASLK 279
>WB|WBGene00008132 [details] [associations]
symbol:gale-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA] [GO:0006012 "galactose
metabolic process" evidence=IEA] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0042335
"cuticle development" evidence=IGI;IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0042335 GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GeneTree:ENSGT00530000063128 OMA:THAPIDA EMBL:Z99709 GeneID:173171
KEGG:cel:CELE_C47B2.6 UCSC:C47B2.6b CTD:173171 NextBio:878565
RefSeq:NP_001021052.1 ProteinModelPortal:Q564Q1 SMR:Q564Q1
STRING:Q564Q1 PRIDE:Q564Q1 EnsemblMetazoa:C47B2.6b
WormBase:C47B2.6b InParanoid:Q564Q1 ArrayExpress:Q564Q1
Uniprot:Q564Q1
Length = 349
Score = 158 (60.7 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 49/178 (27%), Positives = 82/178 (46%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKL-------DYCSNLKNLNP-SRLS-PN 59
+IL+TGAAGFI SH L+ + Y ++ +D D N +L ++L+ +
Sbjct: 2 HILVTGAAGFIGSHTVLELLNS--GYTVLCIDNFANAISVTDEHGNAISLKRVAQLTGKD 59
Query: 60 FKFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEAC 119
F DV + + K D I+H AA V S ++ NN+ + L++ C
Sbjct: 60 VPFQNVDVCDEAALEKVFSENKFDGIIHLAALKAVGESVAKPLQYYSNNLVASLNLIQMC 119
Query: 120 KITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS 177
+ +K F+ S+ VYG E + + Q + TNPY TK E +++ G++
Sbjct: 120 -LKYNVKNFVFSSSATVYGPPSELPITEKSQTGQGI-TNPYGQTKYMMEQILIDVGKA 175
Score = 124 (48.7 bits), Expect = 0.00015, P = 0.00015
Identities = 77/321 (23%), Positives = 120/321 (37%)
Query: 28 IGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMH 87
I N+ I V D+ +LK + + F DV + + K D I+H
Sbjct: 30 IDNFAN-AISVTDEHGNAISLKRV-AQLTGKDVPFQNVDVCDEAALEKVFSENKFDGIIH 87
Query: 88 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEAC-KITGQIKRFIHVST-----DEV----Y 137
AA V S ++ NN+ + L++ C K + F +T E+
Sbjct: 88 LAALKAVGESVAKPLQYYSNNLVASLNLIQMCLKYNVKNFVFSSSATVYGPPSELPITEK 147
Query: 138 GETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNV-YGPNQF 196
+T + + ++ KA E V+ Y PV + + P
Sbjct: 148 SQTGQGITNPYGQTKYMMEQILIDVGKANPEWNVVLL--RYFNPVGAHKSGLIGEDPKGV 205
Query: 197 PEKLIPKFILLAMKGKP-LPIHGD------GSNVRSYLYCEDVAE----AFDTILHKGEV 245
P L+P +A+ P L I+GD G+ VR Y++ D+A+ AFD I G +
Sbjct: 206 PNNLMPYVSQVAIGKLPVLTIYGDQFDTVDGTGVRDYIHVVDLAKGHVKAFDRIKTVGNI 265
Query: 246 G-HVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ-LGW 303
G +YN+GT V + D K S D +K RP + + D ++ LGW
Sbjct: 266 GTEIYNLGTGVGYSVRQMV-DALKKVS-GRDIPVKIGVPRPGDVASVYCDPSLAQEKLGW 323
Query: 304 YERVTWEEGLQKTMKWYISNP 324
EE W NP
Sbjct: 324 RAETGLEEMCADLWNWQTKNP 344
>TIGR_CMR|GSU_0626 [details] [associations]
symbol:GSU_0626 "GDP-mannose 4,6-dehydratase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0019673
KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
RefSeq:NP_951684.1 ProteinModelPortal:Q74FI2 SMR:Q74FI2
GeneID:2685242 KEGG:gsu:GSU0626 PATRIC:22024003 OMA:YACAKAY
ProtClustDB:CLSK827959 BioCyc:GSUL243231:GH27-625-MONOMER
Uniprot:Q74FI2
Length = 349
Score = 161 (61.7 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 52/177 (29%), Positives = 83/177 (46%)
Query: 8 KNILITGAAGFIASHVCNRLIGN-YPEYKIVVLDKLDYCSNLKNLNPSRLSPNFK-FIK- 64
K LITG +G S++ L+G Y + ++ + +L P+ + F+
Sbjct: 2 KRALITGISGQDGSYLAELLLGKGYEVHGVIRRSSSFNTGRIDHLYRDPHEPDVRLFLHY 61
Query: 65 GDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEACKITG 123
GD+ A ++ +L + D I + AQ+HV SF E+T + GT LLE + TG
Sbjct: 62 GDLNDASSINRVLREVRPDEIYNLGAQSHVRVSFDVP-EYTGEIDALGTVRLLEGIRETG 120
Query: 124 QIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 180
RF S+ E+YG+ E E + P +PY+ KA A + + Y SYG+
Sbjct: 121 LNTRFYQASSSELYGKVVETP---QKETTPFYPRSPYACAKAYAYYITVNYRESYGM 174
Score = 39 (18.8 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 299 KQLGWYERVTWEEGLQKTM 317
+QLGW RV ++ GL M
Sbjct: 316 RQLGWQPRVDFQ-GLVDMM 333
>TAIR|locus:2041974 [details] [associations]
symbol:AXS1 "UDP-D-apiose/UDP-D-xylose synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0009226 "nucleotide-sugar biosynthetic process" evidence=IDA]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IDA]
[GO:0051287 "NAD binding" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005829 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:3.40.50.720 GO:GO:0051287 EMBL:AC005824 GO:GO:0048040
KO:K12449 ProtClustDB:PLN02427 EMBL:AF361574 EMBL:AY086830
EMBL:BT001016 EMBL:AY442191 EMBL:AY735589 EMBL:AY924751
IPI:IPI00541963 PIR:G84677 RefSeq:NP_180353.1 UniGene:At.23574
ProteinModelPortal:Q9ZUY6 SMR:Q9ZUY6 STRING:Q9ZUY6 PRIDE:Q9ZUY6
EnsemblPlants:AT2G27860.1 GeneID:817332 KEGG:ath:AT2G27860
TAIR:At2g27860 HOGENOM:HOG000261188 InParanoid:Q9ZUY6 OMA:EYKENAQ
PhylomeDB:Q9ZUY6 BioCyc:ARA:AT2G27860-MONOMER
BioCyc:MetaCyc:AT2G27860-MONOMER ArrayExpress:Q9ZUY6
Genevestigator:Q9ZUY6 GO:GO:0009226 Uniprot:Q9ZUY6
Length = 389
Score = 112 (44.5 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 41/138 (29%), Positives = 66/138 (47%)
Query: 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNL-NPSRL--SPNFKFI 63
P I + GA GFI SH+C +L+ P +K++ LD Y +K+L P + S +F
Sbjct: 17 PLTICMIGAGGFIGSHLCEKLLTETP-HKVLALDV--YNDKIKHLLEPDTVEWSGRIQFH 73
Query: 64 KGDVASADLVHFILLTEKIDTIMHFAAQ-THVDNSFGNSFEFTKNNIYGTHVLLEACKIT 122
+ ++ + L + D I++ AA T D + + +N +++ C
Sbjct: 74 RINIKHDSRLEG--LVKMADLIINLAAICTPADYNT-RPLDTIYSNFIDALPVVKYCSEN 130
Query: 123 GQIKRFIHVSTDEVYGET 140
KR IH ST EVYG+T
Sbjct: 131 N--KRLIHFSTCEVYGKT 146
Score = 94 (38.1 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 42/186 (22%), Positives = 80/186 (43%)
Query: 160 YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ-F------PEKLIPKFILL----A 208
Y+ K E LV A G GL R N GP F P + +P+ +
Sbjct: 185 YACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
Query: 209 MKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEV--GHVYNIGTKKE----RRVIDV 262
++ +PL + G + R+++Y D EA ++ E GH++N+G R++ ++
Sbjct: 245 LRREPLKLVDGGESQRTFVYINDAIEAVLLMIENPERANGHIFNVGNPNNEVTVRQLAEM 304
Query: 263 ATDICKLFS-----LNPDTQIKFVE--NRPFNDQ-RYFLDVQKL-KQLGWYERVTWEEGL 313
T++ S +P + E ++D + D+ + +QLGW + + + L
Sbjct: 305 MTEVYAKVSGEGAIESPTVDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSLWDLL 364
Query: 314 QKTMKW 319
+ T+ +
Sbjct: 365 ESTLTY 370
Score = 50 (22.7 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 299 KQLGWYERVTWEEGLQKTMKWYISNP-DWWGDVSGALLPHPRTSMAPAIEGKVDG 352
KQL ER+ + EG + +++ I P +W G PR P I+G +G
Sbjct: 189 KQL--IERLVYAEGAENGLEFTIVRPFNWIG---------PRMDFIPGIDGPSEG 232
>UNIPROTKB|Q0C421 [details] [associations]
symbol:HNE_0794 "Putative GDP-6-deoxy-D-lyxo-4-hexulose
reductase" species:228405 "Hyphomonas neptunium ATCC 15444"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0003824 "catalytic activity" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:CP000158 GenomeReviews:CP000158_GR
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167992 OMA:NLLEACA
RefSeq:YP_759522.1 ProteinModelPortal:Q0C421 STRING:Q0C421
GeneID:4288576 KEGG:hne:HNE_0794 PATRIC:32214396
BioCyc:HNEP228405:GI69-836-MONOMER Uniprot:Q0C421
Length = 324
Score = 157 (60.3 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 79/327 (24%), Positives = 136/327 (41%)
Query: 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKG 65
T + ILITGA GF+ ++ L+ Y+ L L ++L R+ +
Sbjct: 2 TGRRILITGANGFVGGYMIRELVA--AGYQHSELHTLTVSGAEQSL---RIGQAHRCDLR 56
Query: 66 DVASADLVHFILLTEKIDTIMHFAA-----QTHVDNSFGNSFEFTKNNIYGTHVLLEACK 120
D AS +H +L + I+H AA Q D S + F G VL AC
Sbjct: 57 DSAS---IHRLLQEVQPTGIVHLAAIALPSQAKADPSAAWAVNFEAVRQLGEAVL--ACS 111
Query: 121 ITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 180
+ + + E YG + +E + L P PY+ATKA A++ + R+ GL
Sbjct: 112 PHAVL---VFAGSSESYGASFNTVAGAVNEGTALRPLTPYAATKAAADV-ALGQMRNDGL 167
Query: 181 PVITTRGNNVYGPNQFPEKLIPKF---ILLAMKGKPLPIH--GDGSNVRSYLYCEDVAE- 234
+ R N GP Q P+ ++ F I + G P+ G+ +R ++ DV
Sbjct: 168 NAVRFRAFNHTGPGQSPDYVVASFAAQIAQIIAGDHPPVIRVGNLDAMRDFVDVRDVVRG 227
Query: 235 ---AFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRY 291
A +T L G V+N+ + R + + + + ++ + + R + R
Sbjct: 228 YRLALETELDPVSEG-VFNLASGTPRSIRSILNTLIDIAGVDIAIETDPAKLRKNDVPRT 286
Query: 292 FLDVQKLK-QLGWYERVTWEEGLQKTM 317
+ D + + +LGW + +E+ L T+
Sbjct: 287 WGDANRARTELGWVPYLAFEQTLVDTL 313
>UNIPROTKB|B4E3U7 [details] [associations]
symbol:UXS1 "cDNA FLJ57788, highly similar to
UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AC018878 GO:GO:0048040 UniGene:Hs.469561 HGNC:HGNC:17729
EMBL:AK304872 IPI:IPI00910001 SMR:B4E3U7 STRING:B4E3U7
Ensembl:ENST00000428048 UCSC:uc010ywh.2 Uniprot:B4E3U7
Length = 185
Score = 137 (53.3 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 33/119 (27%), Positives = 58/119 (48%)
Query: 127 RFIHVSTDEVYGETDEDAVVGNH--EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 184
R + ST EVYG+ + ++ + + P Y K AE + AY + G+ V
Sbjct: 40 RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRV 99
Query: 185 TRGNNVYGPNQFPE--KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILH 241
R N +GP +++ FIL A++G+PL ++G GS R++ Y D+ +++
Sbjct: 100 ARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMN 158
>UNIPROTKB|C9JE50 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:AC018878 GO:GO:0048040 HGNC:HGNC:17729
IPI:IPI00910001 ProteinModelPortal:C9JE50 SMR:C9JE50 STRING:C9JE50
PRIDE:C9JE50 Ensembl:ENST00000441952 ArrayExpress:C9JE50
Bgee:C9JE50 Uniprot:C9JE50
Length = 171
Score = 137 (53.3 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 33/119 (27%), Positives = 58/119 (48%)
Query: 127 RFIHVSTDEVYGETDEDAVVGNH--EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 184
R + ST EVYG+ + ++ + + P Y K AE + AY + G+ V
Sbjct: 40 RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRV 99
Query: 185 TRGNNVYGPNQFPE--KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILH 241
R N +GP +++ FIL A++G+PL ++G GS R++ Y D+ +++
Sbjct: 100 ARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMN 158
>CGD|CAL0005951 [details] [associations]
symbol:ERG26 species:5476 "Candida albicans" [GO:0000252 "C-3
sterol dehydrogenase (C-4 sterol decarboxylase) activity"
evidence=IGI;ISS] [GO:0006696 "ergosterol biosynthetic process"
evidence=IGI;ISS] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 CGD:CAL0005951
eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006696 KO:K07748 GO:GO:0000252 EMBL:AACQ01000084
EMBL:AACQ01000083 RefSeq:XP_715564.1 RefSeq:XP_715620.1
ProteinModelPortal:Q5A1B0 STRING:Q5A1B0 GeneID:3642731
GeneID:3642803 KEGG:cal:CaO19.10427 KEGG:cal:CaO19.2909
Uniprot:Q5A1B0
Length = 350
Score = 156 (60.0 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 62/235 (26%), Positives = 103/235 (43%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKN---LNPSRLSPNFKFIK 64
+++LI G +GF+ H+ + + P I V D L +PS++ +F K
Sbjct: 6 QSVLIIGGSGFLGLHLIEQFYRHCPNVAITVFDVRPLPEKLSKYFTFDPSKI----QFFK 61
Query: 65 GDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFE-FTKNNIYGTHVLLEACKITG 123
GD+ S V + K D I+H A+ H G E + K N+ GT LL +
Sbjct: 62 GDLTSDKDVSDAINQSKCDVIVHSASPMH-----GLPQEIYEKVNVQGTKNLLSVAQKL- 115
Query: 124 QIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPT---NPYSATKAGAEMLVMAYGRSYGL 180
+K ++ S+ V +D + N + + P + Y+ TKA AE VM + L
Sbjct: 116 HVKALVYTSSAGVIFN-GQDVI--NADETWPYPEVHMDGYNETKAAAEEAVMKANDNDQL 172
Query: 181 PVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEA 235
+ R ++GP +L+P A G+ GD +N+ + Y +VA+A
Sbjct: 173 RTVCLRPAGIFGPGD--RQLVPGLRASAKLGQSKYQLGDNNNLFDWTYVGNVADA 225
Score = 43 (20.2 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 290 RYFLDVQKLKQLGWYERVTWEEGLQKTMKW 319
RY + K LG+ V E G+ T+ W
Sbjct: 316 RYHNIAKAKKLLGYKPEVDLETGINYTLDW 345
>UNIPROTKB|Q5A1B0 [details] [associations]
symbol:ERG26 "Putative uncharacterized protein ERG26"
species:237561 "Candida albicans SC5314" [GO:0000252 "C-3 sterol
dehydrogenase (C-4 sterol decarboxylase) activity" evidence=IGI]
[GO:0006696 "ergosterol biosynthetic process" evidence=IGI]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 CGD:CAL0005951
eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006696 KO:K07748 GO:GO:0000252 EMBL:AACQ01000084
EMBL:AACQ01000083 RefSeq:XP_715564.1 RefSeq:XP_715620.1
ProteinModelPortal:Q5A1B0 STRING:Q5A1B0 GeneID:3642731
GeneID:3642803 KEGG:cal:CaO19.10427 KEGG:cal:CaO19.2909
Uniprot:Q5A1B0
Length = 350
Score = 156 (60.0 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 62/235 (26%), Positives = 103/235 (43%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKN---LNPSRLSPNFKFIK 64
+++LI G +GF+ H+ + + P I V D L +PS++ +F K
Sbjct: 6 QSVLIIGGSGFLGLHLIEQFYRHCPNVAITVFDVRPLPEKLSKYFTFDPSKI----QFFK 61
Query: 65 GDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFE-FTKNNIYGTHVLLEACKITG 123
GD+ S V + K D I+H A+ H G E + K N+ GT LL +
Sbjct: 62 GDLTSDKDVSDAINQSKCDVIVHSASPMH-----GLPQEIYEKVNVQGTKNLLSVAQKL- 115
Query: 124 QIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPT---NPYSATKAGAEMLVMAYGRSYGL 180
+K ++ S+ V +D + N + + P + Y+ TKA AE VM + L
Sbjct: 116 HVKALVYTSSAGVIFN-GQDVI--NADETWPYPEVHMDGYNETKAAAEEAVMKANDNDQL 172
Query: 181 PVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEA 235
+ R ++GP +L+P A G+ GD +N+ + Y +VA+A
Sbjct: 173 RTVCLRPAGIFGPGD--RQLVPGLRASAKLGQSKYQLGDNNNLFDWTYVGNVADA 225
Score = 43 (20.2 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 290 RYFLDVQKLKQLGWYERVTWEEGLQKTMKW 319
RY + K LG+ V E G+ T+ W
Sbjct: 316 RYHNIAKAKKLLGYKPEVDLETGINYTLDW 345
>ZFIN|ZDB-GENE-050417-163 [details] [associations]
symbol:nsdhl "NAD(P) dependent steroid
dehydrogenase-like" species:7955 "Danio rerio" [GO:0016616
"oxidoreductase activity, acting on the CH-OH group of donors, NAD
or NADP as acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 ZFIN:ZDB-GENE-050417-163 eggNOG:COG0451
HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 KO:K07748 CTD:50814 HOVERGEN:HBG054675 EMBL:BC093332
IPI:IPI00570211 RefSeq:NP_001017674.1 UniGene:Dr.84494
ProteinModelPortal:Q566U2 STRING:Q566U2 GeneID:550369
KEGG:dre:550369 InParanoid:Q566U2 NextBio:20879621
ArrayExpress:Q566U2 Uniprot:Q566U2
Length = 345
Score = 156 (60.0 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 51/191 (26%), Positives = 89/191 (46%)
Query: 44 YCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFE 103
Y N+ ++ + P F +GD+ D + ++ +++ + H A+ + G F+
Sbjct: 34 YTVNVFDIRQAYELPGVTFYQGDLC--DKLALVMALKEVSIVFHCASPAPGSDD-GALFQ 90
Query: 104 FTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLL-PTNPYSA 162
+ NI GT +++AC G K + S V+ TD G + P + Y+
Sbjct: 91 --RVNIDGTRTVIQACHEAGVQKLILTSSASVVFEGTDIKN--GKEDLPYAKKPIDYYTE 146
Query: 163 TKAGAEMLVM-AYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGS 221
TK E LV+ A + G + R + ++GP P+ L+P + A +GK I GDGS
Sbjct: 147 TKIKQEKLVLEACSKEKGFLTVAIRPHGIFGPRD-PQ-LVPILVDTARRGKMKFIIGDGS 204
Query: 222 NVRSYLYCEDV 232
N+ + Y E+V
Sbjct: 205 NLVDFTYVENV 215
>TAIR|locus:2200018 [details] [associations]
symbol:AXS2 "UDP-D-apiose/UDP-D-xylose synthase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0009226 "nucleotide-sugar biosynthetic process" evidence=ISS]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=ISS]
[GO:0048046 "apoplast" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
EMBL:CP002684 GO:GO:0005829 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0048046 GO:GO:0044237
EMBL:AC011438 EMBL:BT001220 IPI:IPI00543705 PIR:C86216
RefSeq:NP_563807.1 UniGene:At.20110 ProteinModelPortal:Q9SGE0
SMR:Q9SGE0 STRING:Q9SGE0 PRIDE:Q9SGE0 ProMEX:Q9SGE0
EnsemblPlants:AT1G08200.1 GeneID:837341 KEGG:ath:AT1G08200
TAIR:At1g08200 InParanoid:Q9SGE0 KO:K12449 OMA:RAFTDID
PhylomeDB:Q9SGE0 ProtClustDB:PLN02427 Genevestigator:Q9SGE0
Uniprot:Q9SGE0
Length = 389
Score = 105 (42.0 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 40/150 (26%), Positives = 68/150 (45%)
Query: 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNL-NPSRL--SPNFKFI 63
P I + GA GFI SH+C +L+ P +K++ LD Y +K+L P + + +F
Sbjct: 17 PMTICMIGAGGFIGSHLCEKLMTETP-HKVLALDV--YNDKIKHLLEPDTVQWAGRIQFH 73
Query: 64 KGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITG 123
+ ++ + ++ + TI A T D + + +N +++ C
Sbjct: 74 RINIKHDSRLEGLIKMADL-TINLAAICTPADYNT-RPLDTIYSNFIDALPVVKYCSENN 131
Query: 124 QIKRFIHVSTDEVYGETDEDAVVGNHEASQ 153
KR IH ST EVYG+T + +H Q
Sbjct: 132 --KRLIHFSTCEVYGKTIGSFLPKDHPLRQ 159
Score = 99 (39.9 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 43/186 (23%), Positives = 85/186 (45%)
Query: 160 YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ-F------PEKLIPKFILL----A 208
Y+ K E LV A G GL R N GP F P + +P+ +
Sbjct: 185 YACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
Query: 209 MKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEV--GHVYNIGT-KKERRVIDVATD 265
++ +PL + G + R+++Y +D EA ++ E GH++N+G E V +A
Sbjct: 245 LRREPLKLVDGGESQRTFIYIKDAIEAVLLMIENPERANGHIFNVGNPNNEVTVRQLAEM 304
Query: 266 ICKLFS-LNPDTQIKF----VENRPFNDQRYFLDVQKL-------KQLGWYERVTWEEGL 313
+ ++++ ++ +T I+ V ++ F + Y +++ +QLGW + + + L
Sbjct: 305 MTEVYAKVSGETAIESPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSLWDLL 364
Query: 314 QKTMKW 319
+ T+ +
Sbjct: 365 ESTLTY 370
>UNIPROTKB|F1PI88 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
EMBL:AAEX03001747 RefSeq:XP_003638951.1 ProteinModelPortal:F1PI88
Ensembl:ENSCAFT00000020920 GeneID:100855555 KEGG:cfa:100855555
Uniprot:F1PI88
Length = 348
Score = 112 (44.5 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 41/171 (23%), Positives = 68/171 (39%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSP-------NF 60
+ +L+TG AG+I SH L+ Y VV+D K P L +
Sbjct: 3 EKVLVTGGAGYIGSHTVLELLE--AGYSPVVIDNFHNAIRGKGSMPESLQRVQELTGRSV 60
Query: 61 KFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 120
+F + D+ + + ++HFA V S ++ + N+ G+ LLE +
Sbjct: 61 EFEEMDILDQAALQRLFEKHSFTAVIHFAGLKAVGESVQKPLDYYRVNLTGSIQLLEIMR 120
Query: 121 ITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 171
G +K + S+ VYG + H TNPY +K E ++
Sbjct: 121 AHG-VKNLVFSSSATVYGNPQYLPLDEAHPTGGC--TNPYGKSKYFIEEMI 168
Score = 89 (36.4 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 35/147 (23%), Positives = 63/147 (42%)
Query: 193 PNQFPEKLIPKFILLAM-KGKPLPIHG------DGSNVRSYLYCEDVAEAFDTILHK--G 243
P P L+P +A+ + + L + G DG+ VR Y++ D+A+ L K
Sbjct: 201 PQGIPNNLMPYVSQVAIGRREVLNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKE 260
Query: 244 EVG-HVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQ-KLKQL 301
+ G +YN+GT V+ + + K + + K V R + + + LK+L
Sbjct: 261 QCGCRIYNLGTGTGYSVLQMVEAMKK--ASGQEIPYKVVARREGDVAACYANPSLALKEL 318
Query: 302 GWYERVTWEEGLQKTMKWYISNPDWWG 328
GW + + + +W NP +G
Sbjct: 319 GWTAVLGLDRMCEDLWRWQKQNPSGFG 345
>UNIPROTKB|O60547 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:9606
"Homo sapiens" [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IC]
[GO:0070401 "NADP+ binding" evidence=IDA] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=IGI;IDA] [GO:0019673
"GDP-mannose metabolic process" evidence=IGI;IDA] [GO:0007219
"Notch signaling pathway" evidence=ISS] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 GO:GO:0005737 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 EMBL:AL034344
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 OMA:IAYNLTD HOVERGEN:HBG000727 EMBL:AF042377
EMBL:CR541929 EMBL:CR541947 EMBL:AL033517 EMBL:AL035693
EMBL:AL137179 EMBL:AL158139 EMBL:BC000117 EMBL:AF040260
IPI:IPI00030207 RefSeq:NP_001240775.1 RefSeq:NP_001491.1
UniGene:Hs.144496 UniGene:Hs.660919 PDB:1T2A PDBsum:1T2A
ProteinModelPortal:O60547 SMR:O60547 IntAct:O60547 STRING:O60547
PhosphoSite:O60547 PaxDb:O60547 PeptideAtlas:O60547 PRIDE:O60547
DNASU:2762 Ensembl:ENST00000380815 GeneID:2762 KEGG:hsa:2762
UCSC:uc003mtq.3 CTD:2762 GeneCards:GC06M001624 HGNC:HGNC:4369
HPA:HPA031528 MIM:602884 neXtProt:NX_O60547 PharmGKB:PA28754
InParanoid:O60547 OrthoDB:EOG4FXR7M PhylomeDB:O60547 ChiTaRS:GMDS
EvolutionaryTrace:O60547 GenomeRNAi:2762 NextBio:10866
ArrayExpress:O60547 Bgee:O60547 CleanEx:HS_GMDS
Genevestigator:O60547 GermOnline:ENSG00000112699 Uniprot:O60547
Length = 372
Score = 155 (59.6 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 55/182 (30%), Positives = 87/182 (47%)
Query: 7 PKNI-LITGAAGFIASHVCNRLIGN-YPEYKIVVLDKLDYCSNLKNL--NP-SRLSPNFK 61
P+N+ LITG G S++ L+ Y + IV +++L NP + + N K
Sbjct: 22 PRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMK 81
Query: 62 FIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEACK 120
GD+ + + I+ K I + AQ+HV SF + E+T + + GT LL+A K
Sbjct: 82 LHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDGVGTLRLLDAVK 140
Query: 121 ITGQIK--RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY 178
G I +F ST E+YG+ E + E + P +PY A K A +V+ + +Y
Sbjct: 141 TCGLINSVKFYQASTSELYGKVQE---IPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY 197
Query: 179 GL 180
L
Sbjct: 198 NL 199
>UNIPROTKB|F6W0W9 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase isoform 1"
species:9544 "Macaca mulatta" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0070401 "NADP+ binding" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
CTD:2762 EMBL:JU322217 EMBL:JV046790 RefSeq:NP_001253718.1
UniGene:Mmu.34300 Ensembl:ENSMMUT00000008111 GeneID:707051
KEGG:mcc:707051 NextBio:19971634 Uniprot:F6W0W9
Length = 372
Score = 155 (59.6 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 55/182 (30%), Positives = 87/182 (47%)
Query: 7 PKNI-LITGAAGFIASHVCNRLIGN-YPEYKIVVLDKLDYCSNLKNL--NP-SRLSPNFK 61
P+N+ LITG G S++ L+ Y + IV +++L NP + + N K
Sbjct: 22 PRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMK 81
Query: 62 FIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEACK 120
GD+ + + I+ K I + AQ+HV SF + E+T + + GT LL+A K
Sbjct: 82 LHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDGVGTLRLLDAVK 140
Query: 121 ITGQIK--RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY 178
G I +F ST E+YG+ E + E + P +PY A K A +V+ + +Y
Sbjct: 141 TCGLINSVKFYQASTSELYGKVQE---IPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY 197
Query: 179 GL 180
L
Sbjct: 198 NL 199
>UNIPROTKB|F7EWI9 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9483
"Callithrix jacchus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
OMA:IAYNLTD CTD:2762 EMBL:ACFV01112271 EMBL:ACFV01112272
EMBL:ACFV01112273 EMBL:ACFV01112274 EMBL:ACFV01112275
EMBL:ACFV01112276 EMBL:ACFV01112277 EMBL:ACFV01112278
EMBL:ACFV01112279 EMBL:ACFV01112280 EMBL:ACFV01112281
EMBL:ACFV01112282 EMBL:ACFV01112283 EMBL:ACFV01112284
EMBL:ACFV01112285 EMBL:ACFV01112286 EMBL:ACFV01112287
EMBL:ACFV01112288 EMBL:ACFV01112289 EMBL:ACFV01112290
EMBL:ACFV01112291 EMBL:ACFV01112292 EMBL:ACFV01112293
EMBL:ACFV01112294 EMBL:ACFV01112295 EMBL:ACFV01112296
EMBL:ACFV01112297 EMBL:ACFV01112298 EMBL:ACFV01112299
EMBL:ACFV01112300 EMBL:ACFV01112301 RefSeq:XP_002746325.1
ProteinModelPortal:F7EWI9 Ensembl:ENSCJAT00000038466
GeneID:100390839 Uniprot:F7EWI9
Length = 372
Score = 155 (59.6 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 55/182 (30%), Positives = 87/182 (47%)
Query: 7 PKNI-LITGAAGFIASHVCNRLIGN-YPEYKIVVLDKLDYCSNLKNL--NP-SRLSPNFK 61
P+N+ LITG G S++ L+ Y + IV +++L NP + + N K
Sbjct: 22 PRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMK 81
Query: 62 FIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEACK 120
GD+ + + I+ K I + AQ+HV SF + E+T + + GT LL+A K
Sbjct: 82 LHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDGVGTLRLLDAVK 140
Query: 121 ITGQIK--RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY 178
G I +F ST E+YG+ E + E + P +PY A K A +V+ + +Y
Sbjct: 141 TCGLINSVKFYQASTSELYGKVQE---IPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY 197
Query: 179 GL 180
L
Sbjct: 198 NL 199
>DICTYBASE|DDB_G0275295 [details] [associations]
symbol:galE "UDP-glucose 4-epimerase" species:44689
"Dictyostelium discoideum" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0006012
"galactose metabolic process" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016853 "isomerase activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
UniPathway:UPA00214 InterPro:IPR016040 dictyBase:DDB_G0275295
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0044237
eggNOG:COG1087 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P04397 OMA:ADKAWNA RefSeq:XP_643834.1
ProteinModelPortal:Q553X7 SMR:Q553X7 STRING:Q553X7
EnsemblProtists:DDB0231575 GeneID:8619881 KEGG:ddi:DDB_G0275295
ProtClustDB:CLSZ2729193 Uniprot:Q553X7
Length = 344
Score = 154 (59.3 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 72/268 (26%), Positives = 113/268 (42%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCS--NLKNLNPSRLSPNFKFIKGDV 67
I++TG AG+I SH LI Y V++D L S +K + S +F D+
Sbjct: 8 IMVTGGAGYIGSHTVIELIE--AGYTPVIVDNLSNSSLEAIKRVE-SITGKEIEFHHVDI 64
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
+ + I T I +++HFA V S ++ NNI GT LL ++K+
Sbjct: 65 MNEKALDEIFETGNIRSVIHFAGLKAVGESNKLPLKYYNNNIAGTLTLLNLMD-KHRVKK 123
Query: 128 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---------- 177
+ S+ VYG+ + E L TNPY TK E ++ S
Sbjct: 124 LVFSSSATVYGDPHTVPIT---EDFPLSATNPYGRTKLYVEGILQDLCASDPEWNCIMLR 180
Query: 178 YGLPVITTRGNNVYG--PNQFPEKLIPKFILLAMKGKP-LPIHG------DGSNVRSYLY 228
Y PV + + G P P L+P A+ +P L I G DG+ VR +++
Sbjct: 181 YFNPV-GAHPSGLIGEDPKDIPNNLMPYVTQTAIGKRPILSIFGNDYNTPDGTGVRDFIH 239
Query: 229 CEDVAEAFDTILHKGEVGHVYNIGTKKE 256
D+A KG + + ++ +KK+
Sbjct: 240 VVDLA--------KGHISALSSLHSKKQ 259
>MGI|MGI:96234 [details] [associations]
symbol:Hsd3b2 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 2" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0004769 "steroid delta-isomerase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016616 "oxidoreductase activity,
acting on the CH-OH group of donors, NAD or NADP as acceptor"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 MGI:MGI:96234 GO:GO:0016021 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG
BRENDA:1.1.1.145 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0031966 GO:GO:0006694
BRENDA:5.3.3.1 CTD:3284 EMBL:AL606755 EMBL:BC026757 EMBL:BC040397
EMBL:M75886 IPI:IPI00230105 RefSeq:NP_694873.2 UniGene:Mm.482364
ProteinModelPortal:P26149 SMR:P26149 STRING:P26149
PhosphoSite:P26149 PaxDb:P26149 PRIDE:P26149
Ensembl:ENSMUST00000107021 Ensembl:ENSMUST00000107022
Ensembl:ENSMUST00000177651 GeneID:15493 KEGG:mmu:15493
GeneTree:ENSGT00550000074557 InParanoid:B1ARN7 OMA:HEEECHE
NextBio:288370 Bgee:P26149 Genevestigator:P26149
GermOnline:ENSMUSG00000063730 Uniprot:P26149
Length = 373
Score = 140 (54.3 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 65/234 (27%), Positives = 99/234 (42%)
Query: 11 LITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASA 70
L+TGA GF+ + L+ +I VLDK+ K S ++GD+
Sbjct: 7 LVTGAGGFLGQRIIQLLVQEEDLEEIRVLDKVFRPETRKEFFNLETSIKVTVLEGDIL-- 64
Query: 71 DLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIH 130
D + + I ++H AA V N+ GT LLEAC I + FI
Sbjct: 65 DTQYLRRACQGISVVIHTAAIIDVTGVIPRQ-TILDVNLKGTQNLLEAC-IQASVPAFIF 122
Query: 131 VSTDEVYGETD-EDAVVGNHEAS--QLLPTNPYSATKAGAEMLVMAYGRSY----G-LPV 182
S+ +V G ++ V+ HE + ++PY +K AE V+A S G L
Sbjct: 123 SSSVDVAGPNSYKEIVLNGHEEECHESTWSDPYPYSKKMAEKAVLAANGSMLKNGGTLQT 182
Query: 183 ITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGS-NVRSYLYCEDVAEA 235
R +YG P LI I++A+K K + + G N + +Y +VA A
Sbjct: 183 CALRPMCIYGERS-P--LISNIIIMALKHKGI-LRSFGKFNTANPVYVGNVAWA 232
Score = 59 (25.8 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 299 KQLGWYERVTWEEGLQKTMKW 319
+ LG+ V+WEE QKT +W
Sbjct: 336 RDLGYEPLVSWEEAKQKTSEW 356
>TIGR_CMR|CPS_4199 [details] [associations]
symbol:CPS_4199 "GDP-mannose 4,6-dehydratase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0019673
eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 RefSeq:YP_270850.1
ProteinModelPortal:Q47WH2 SMR:Q47WH2 STRING:Q47WH2 GeneID:3519434
KEGG:cps:CPS_4199 PATRIC:21471261 ProtClustDB:CLSK589180
BioCyc:CPSY167879:GI48-4209-MONOMER Uniprot:Q47WH2
Length = 374
Score = 149 (57.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 54/181 (29%), Positives = 81/181 (44%)
Query: 6 TPKNILITGAAGFIASHVCNRLIGN-YPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIK 64
T K LITG G S++ L+ Y + I + ++ N KF
Sbjct: 3 TKKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSLNTERIDHIYQDNHEKNQKFFL 62
Query: 65 --GDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEACKI 121
GD+ + + IL + D + + AQ+HV SF E+T + + GT LLEA +
Sbjct: 63 HYGDLTDSSNLTRILKDVQPDEVYNLGAQSHVAVSF-ECPEYTADVDAIGTLRLLEAIRF 121
Query: 122 TGQIKR--FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG 179
G K+ F ST E+YGE E + E + P +PY+ K A +V+ Y SYG
Sbjct: 122 LGLEKKTKFYQASTSELYGEVQE---IPQSETTPFHPRSPYAVAKMYAYWIVVNYRESYG 178
Query: 180 L 180
+
Sbjct: 179 M 179
Score = 47 (21.6 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 18/63 (28%), Positives = 26/63 (41%)
Query: 252 GTKKERRVIDVATDICKLFSLNPDTQIKFVEN--RPFNDQRYFLDVQKLKQ-LGWYERVT 308
G + RV + D S+ D +K RP + D K K+ LGW ++T
Sbjct: 282 GLDEVARVTKIIGDNAPALSVG-DIMVKVDPRYFRPAEVETLLGDPSKAKEKLGWVPQIT 340
Query: 309 WEE 311
EE
Sbjct: 341 VEE 343
>UNIPROTKB|C9JW33 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:AC018878 HOGENOM:HOG000168004 GO:GO:0048040
HGNC:HGNC:17729 IPI:IPI00916527 ProteinModelPortal:C9JW33
SMR:C9JW33 STRING:C9JW33 Ensembl:ENST00000457835
ArrayExpress:C9JW33 Bgee:C9JW33 Uniprot:C9JW33
Length = 190
Score = 137 (53.3 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 48/169 (28%), Positives = 75/169 (44%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
K ILITG AGF+ SH+ ++L+ + +++ V+D + +N+ NF+ I DV
Sbjct: 32 KRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNF-FTGRKRNVEHWIGHENFELINHDV 88
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
L ++D I H A+ N N + K N GT +L K G R
Sbjct: 89 VEP-------LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--R 139
Query: 128 FIHVSTDEVYGETDEDAVVGNH--EASQLLPTNPYSATKAGAEMLVMAY 174
+ ST EVYG+ + ++ + + P Y K AE + AY
Sbjct: 140 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAY 188
>TIGR_CMR|SO_3173 [details] [associations]
symbol:SO_3173 "UDP-galactose 4-epimerase, putative"
species:211586 "Shewanella oneidensis MR-1" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISS] [GO:0006012
"galactose metabolic process" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0044237 HOGENOM:HOG000167991
RefSeq:NP_718729.1 ProteinModelPortal:Q8ECG9 GeneID:1170867
KEGG:son:SO_3173 PATRIC:23526030 OMA:HAMSGAP Uniprot:Q8ECG9
Length = 309
Score = 150 (57.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 82/326 (25%), Positives = 139/326 (42%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
++IL+TGA GF+ + +L P+ V P+R + F G++
Sbjct: 4 QSILLTGATGFVGQQILRQL----PQDTRV----------FGRTKPAR---DCHFFAGEL 46
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFE--FTKNNIYGTHVLLEACKITGQI 125
+A+ + L+ +D ++H AA+ HV N N+ + + N T L E G +
Sbjct: 47 -TANTDYRSALSG-VDVVIHCAARAHVMNETANNAAQLYQEVNTLVTLALAEQAAAAG-V 103
Query: 126 KRFIHVSTDEVYGE-TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 184
KRFI +ST +V GE T + +A Q P + Y +KA AE+ + R + V+
Sbjct: 104 KRFIFISTIKVNGEATIAGQLFRASDARQ--PLDHYGESKAKAEIGLFDIARKTEIEVVI 161
Query: 185 TRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTIL-HKG 243
R VYGPN + + LA K PLP G N RS + +++ + T + H
Sbjct: 162 IRPPLVYGPNV--KANFATMLNLAKKNLPLPF-GAIHNKRSMVALDNLVDLIVTCIEHPN 218
Query: 244 EVGHVYNIGTKKE---RRVIDVATDIC-KLFSLNPDTQI------KFVENRPFNDQ---R 290
++ + ++ ++ + T K L P K N+ D+
Sbjct: 219 AANQIFLVSDDQDVSTTELLKLMTGAAGKKPRLLPVPMAWLILAGKVTGNQAIIDRLCGN 278
Query: 291 YFLDVQKLKQ-LGWYERVTWEEGLQK 315
+D+ K L W +T EEG+++
Sbjct: 279 LQVDITHTKNTLSWQPPITVEEGVRR 304
>POMBASE|SPBC365.14c [details] [associations]
symbol:uge1 "UDP-glucose 4-epimerase Uge1" species:4896
"Schizosaccharomyces pombe" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IDA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=ISS] [GO:0042125 "protein galactosylation"
evidence=IMP] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00214 InterPro:IPR016040 PomBase:SPBC365.14c
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CU329671
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 HSSP:P04397 OrthoDB:EOG4NKG3T
GO:GO:0033499 GO:GO:0042125 OMA:ADKAWNA PIR:T40321
RefSeq:NP_596043.1 ProteinModelPortal:Q9Y7X5 SMR:Q9Y7X5
STRING:Q9Y7X5 PRIDE:Q9Y7X5 EnsemblFungi:SPBC365.14c.1
GeneID:2540938 KEGG:spo:SPBC365.14c NextBio:20802053 Uniprot:Q9Y7X5
Length = 355
Score = 149 (57.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 47/166 (28%), Positives = 77/166 (46%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYC-SNLKNLNPSRLSPNFKFI--KGD 66
+L+TG AG+I SH C L+ Y +V++D L C S ++ ++ K I + D
Sbjct: 9 VLVTGGAGYIGSHTCVVLLEK--GYDVVIVDNL--CNSRVEAVHRIEKLTGKKVIFHQVD 64
Query: 67 VASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIK 126
+ + + + I ++HFA V S + KNNI GT L+E C ++
Sbjct: 65 LLDEPALDKVFANQNISAVIHFAGLKAVGESVQVPLSYYKNNISGTINLIE-CMKKYNVR 123
Query: 127 RFIHVSTDEVYGE-TDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 171
F+ S+ VYG+ T + E+ T+PY TK E ++
Sbjct: 124 DFVFSSSATVYGDPTRPGGTIPIPESCPREGTSPYGRTKLFIENII 169
Score = 45 (20.9 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 219 DGSNVRSYLYCEDVAEA 235
DG+ +R Y++ D+AEA
Sbjct: 235 DGTPIRDYIHVCDLAEA 251
>UNIPROTKB|Q8K3X3 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:10029
"Cricetulus griseus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040
Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622 GO:GO:0070401
GO:GO:0019673 GO:GO:0042351 GO:GO:0008446 TIGRFAMs:TIGR01472
EMBL:AF525364 RefSeq:NP_001233625.1 ProteinModelPortal:Q8K3X3
SMR:Q8K3X3 GeneID:100689436 CTD:33716 HOVERGEN:HBG000727
Uniprot:Q8K3X3
Length = 372
Score = 149 (57.5 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 54/182 (29%), Positives = 86/182 (47%)
Query: 7 PKNI-LITGAAGFIASHVCNRLIGN-YPEYKIVVLDKLDYCSNLKNL--NP-SRLSPNFK 61
P+ + LITG G S++ L+ Y + IV +++L NP + + N K
Sbjct: 22 PRKVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMK 81
Query: 62 FIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEACK 120
GD+ + + I+ K I + AQ+HV SF + E+T + + GT LL+A K
Sbjct: 82 LHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDGVGTLRLLDAIK 140
Query: 121 ITGQIK--RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY 178
G I +F ST E+YG+ E + E + P +PY A K A +V+ + +Y
Sbjct: 141 TCGLINSVKFYQASTSELYGKVQE---IPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY 197
Query: 179 GL 180
L
Sbjct: 198 NL 199
>UNIPROTKB|G4MX57 [details] [associations]
symbol:MGG_08012 "UDP-glucose 4-epimerase" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:CM001232 KO:K01784 RefSeq:XP_003714962.1
ProteinModelPortal:G4MX57 SMR:G4MX57 EnsemblFungi:MGG_08012T0
GeneID:2678278 KEGG:mgr:MGG_08012 Uniprot:G4MX57
Length = 369
Score = 125 (49.1 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 50/168 (29%), Positives = 81/168 (48%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRL----SPNFKFIK- 64
+LITG G+I S L+ N +Y +V++D L Y S+ ++ L P F +
Sbjct: 6 VLITGGTGYIGSFTSLALLEN--DYDVVIVDNL-YNSSAVAIDRIELICGKRPAFHNVDI 62
Query: 65 GDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQ 124
D A+ D V F E ID+++HFAA V S E+ + N+ G+ LL + +
Sbjct: 63 TDEAALDKV-FDAHPE-IDSVIHFAALKAVGESGEIPLEYYRVNVGGSISLLRSMQ-KHN 119
Query: 125 IKRFIHVSTDEVYGE-TDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 171
+ + S+ VYG+ T ++ E + PTN Y TK+ E ++
Sbjct: 120 VCNIVFSSSATVYGDATRVPNMIPIPEHCPIGPTNTYGRTKSTIEDVI 167
Score = 69 (29.3 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 30/114 (26%), Positives = 49/114 (42%)
Query: 219 DGSNVRSYLYCEDVAE---AFDTILHKGEVG-HVYNIGTKKERRVIDVATDICKLFS--L 272
DG+ +R Y++ D+A+ A L + G +N+G+ + V ++ K FS +
Sbjct: 244 DGTAIRDYIHVLDLAKGHLAALNYLRDNKPGVKAWNLGSGRGSTVFEMI----KAFSSVV 299
Query: 273 NPDTQIKFVENRPFNDQRYFLDVQKL--KQLGWYERVTWEEGLQKTMKWYISNP 324
D + V R D L K+LGW + E+ Q KW +NP
Sbjct: 300 GRDLPYEVVPRRQ-GDVLDLTANPALANKELGWKTELRMEDACQDLWKWVKNNP 352
>MGI|MGI:2141879 [details] [associations]
symbol:Hsd3b7 "hydroxy-delta-5-steroid dehydrogenase, 3
beta- and steroid delta-isomerase 7" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0001558
"regulation of cell growth" evidence=ISO] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0047016 "cholest-5-ene-3-beta,7-alpha-diol
3-beta-dehydrogenase activity" evidence=ISO] [GO:0055114
"oxidation-reduction process" evidence=ISO] InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 MGI:MGI:2141879
GO:GO:0016021 eggNOG:COG0451 HOGENOM:HOG000167989
HOVERGEN:HBG000014 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0005789 GO:GO:0006694 GeneTree:ENSGT00550000074557 CTD:80270
KO:K12408 OMA:PCGLRLV OrthoDB:EOG4N5VX7 GO:GO:0047016 GO:GO:0001558
EMBL:AF277718 EMBL:BC132605 EMBL:BC138589 IPI:IPI00111009
RefSeq:NP_598704.2 UniGene:Mm.486340 ProteinModelPortal:Q9EQC1
SMR:Q9EQC1 STRING:Q9EQC1 PhosphoSite:Q9EQC1 PaxDb:Q9EQC1
PRIDE:Q9EQC1 Ensembl:ENSMUST00000046863 GeneID:101502
KEGG:mmu:101502 UCSC:uc009jwu.1 InParanoid:A2RTR5 ChiTaRS:HSD3B7
NextBio:354976 Bgee:Q9EQC1 Genevestigator:Q9EQC1
GermOnline:ENSMUSG00000042289 Uniprot:Q9EQC1
Length = 369
Score = 149 (57.5 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 56/192 (29%), Positives = 90/192 (46%)
Query: 11 LITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASA 70
L+TG GF+ H+ L+ P + + + L S L+ L + I+GDV A
Sbjct: 13 LVTGGCGFLGEHIVRMLLEREPRLRELRVFDLHLSSWLEELKAGPVQVTA--IQGDVTQA 70
Query: 71 DLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFT--KNNIYGTHVLLEACKITGQIKRF 128
V + + ++H A V FG + T K N+ GT +++AC TG +
Sbjct: 71 HEVAAAMSGSHV--VIHTAGLVDV---FGKASPKTIHKVNVQGTQNVIDACVQTGT-QYL 124
Query: 129 IHVSTDEVYGETDEDAVV--GNHEAS-QLLPTNPYSATKAGAEMLVM-AYGRSY--GLPV 182
++ S+ EV G + GN + + + ++PY +KA AE LV+ A GR GLP+
Sbjct: 125 VYTSSMEVVGPNIKGHPFYRGNEDTPYEAVHSHPYPCSKALAEQLVLEANGRKVNGGLPL 184
Query: 183 ITT--RGNNVYG 192
+T R +YG
Sbjct: 185 VTCALRPTGIYG 196
Score = 43 (20.2 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 299 KQLGWYERVTWEEGLQKTMKW 319
+ G+ +WEE +T++W
Sbjct: 340 RHFGYKPLFSWEESRTRTIQW 360
>UNIPROTKB|Q4K5C5 [details] [associations]
symbol:PFL_5490 "NAD dependent epimerase/dehydratase family
protein" species:220664 "Pseudomonas protegens Pf-5" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167992 RefSeq:YP_262558.1 ProteinModelPortal:Q4K5C5
STRING:Q4K5C5 GeneID:3479881 KEGG:pfl:PFL_5490 PATRIC:19880467
OMA:EPNPAND ProtClustDB:CLSK881263
BioCyc:PFLU220664:GIX8-5527-MONOMER Uniprot:Q4K5C5
Length = 311
Score = 147 (56.8 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 66/267 (24%), Positives = 117/267 (43%)
Query: 71 DLVHFILLTEKID--TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRF 128
DL + E+++ ++H AA + V + G + + N+ GT LLEA + R
Sbjct: 56 DLAALRRVVEEVEPEVVVHLAAISFV--AHGEADAIYRANVVGTRNLLEALAGLSRTPRA 113
Query: 129 IHV-STDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 187
+ + S+ VYG + + E+ L P N Y+ +K E + + + LP++ R
Sbjct: 114 VLLASSANVYGNAPVELI---DESVSLAPANDYAVSKLAMEYMARLW--MHRLPIVIARP 168
Query: 188 NNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGH 247
N G Q LIPK + + + G+ R + VA A+ +L G
Sbjct: 169 FNYTGVGQASHFLIPKIVSHFQRRASVIELGNLDVERDFSDVRVVALAYVRLLEVVPAGQ 228
Query: 248 VYNIGTKKERRVIDVATDICKLFSLNPDTQI--KFVENRPFNDQRYFLDVQKLKQL-GWY 304
V N+G+ + + +V + + + ++ +FV R +R DV +LK+L G Y
Sbjct: 229 VVNVGSGQVVSLREVLAMMSGISGHEIEVRVNPEFV--RANEVKRLQGDVSRLKELIGGY 286
Query: 305 ERVTWEEGLQKTMKWYISN-PDWWGDV 330
+ L +T++W N P+ G V
Sbjct: 287 QPTP----LMETLEWMFRNGPECIGSV 309
>MGI|MGI:96233 [details] [associations]
symbol:Hsd3b1 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 1" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=ISO] [GO:0004769 "steroid delta-isomerase activity"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=ISO] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016616 "oxidoreductase activity,
acting on the CH-OH group of donors, NAD or NADP as acceptor"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=ISO]
InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 MGI:MGI:96233 GO:GO:0016021 GO:GO:0005739
CTD:3283 eggNOG:COG0451 HOVERGEN:HBG000014 KO:K00070 GO:GO:0003854
GO:GO:0000166 GO:GO:0004769 Gene3D:3.40.50.720 EMBL:M58567
EMBL:BC052659 IPI:IPI00229070 PIR:I49762 RefSeq:NP_032319.1
UniGene:Mm.140811 ProteinModelPortal:P24815 SMR:P24815
STRING:P24815 PhosphoSite:P24815 PaxDb:P24815 PRIDE:P24815
Ensembl:ENSMUST00000107016 GeneID:15492 KEGG:mmu:15492
InParanoid:P24815 OMA:MAGWSCL SABIO-RK:P24815 NextBio:288366
Bgee:P24815 Genevestigator:P24815 GermOnline:ENSMUSG00000027871
GO:GO:0005789 GO:GO:0031966 GO:GO:0006694 Uniprot:P24815
Length = 373
Score = 135 (52.6 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 63/234 (26%), Positives = 97/234 (41%)
Query: 11 LITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASA 70
L+TGA GF+ + L+ ++ LDK+ + + + ++GD+ A
Sbjct: 7 LVTGAGGFVGQRIIKMLVQEKELQEVRALDKVFRPETKEEFSKLQTKTKVTVLEGDILDA 66
Query: 71 DLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIH 130
+ + I ++H AA V N+ GT LLEAC + + FI
Sbjct: 67 QCLR--RACQGISVVIHTAAVIDVTGVIPRQ-TILDVNLKGTQNLLEAC-VQASVPAFIF 122
Query: 131 VSTDEVYGETDEDAVVGN-HEASQLLPT--NPYSATKAGAEMLVMAYGRSY----G-LPV 182
S+ +V G +V N HE T +PY +K AE V+A S G L
Sbjct: 123 CSSVDVAGPNSYKKIVLNGHEEQNHESTWSDPYPYSKKMAEKAVLAANGSMLKNGGTLNT 182
Query: 183 ITTRGNNVYGPNQFPEKLIPKFILLAMKGKP-LPIHGDGSNVRSYLYCEDVAEA 235
R +YG P I I+ A+K K L + G S + + +Y E+VA A
Sbjct: 183 CALRPMYIYGERS-P--FIFNAIIRALKNKGILCVTGKFS-IANPVYVENVAWA 232
Score = 58 (25.5 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 299 KQLGWYERVTWEEGLQKTMKW 319
+ LG+ V WEE QKT +W
Sbjct: 336 RDLGYEPLVNWEEAKQKTSEW 356
>RGD|67377 [details] [associations]
symbol:Hsd3b1 "hydroxy-delta-5-steroid dehydrogenase, 3 beta- and
steroid delta-isomerase 1" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IDA]
[GO:0004769 "steroid delta-isomerase activity" evidence=IDA]
[GO:0005743 "mitochondrial inner membrane" evidence=ISO] [GO:0005758
"mitochondrial intermembrane space" evidence=ISO] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0006700
"C21-steroid hormone biosynthetic process" evidence=IDA] [GO:0006702
"androgen biosynthetic process" evidence=IDA] [GO:0010288 "response
to lead ion" evidence=IEP] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=TAS]
[GO:0021766 "hippocampus development" evidence=IEP] [GO:0030283
"testosterone dehydrogenase [NAD(P)] activity" evidence=TAS]
[GO:0031966 "mitochondrial membrane" evidence=IEA] [GO:0033327
"Leydig cell differentiation" evidence=IEP] [GO:0034698 "response to
gonadotropin stimulus" evidence=IEP] [GO:0034757 "negative
regulation of iron ion transport" evidence=IMP] [GO:0046686
"response to cadmium ion" evidence=IEP] [GO:0051412 "response to
corticosterone stimulus" evidence=IEP] InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 RGD:67377
GO:GO:0016021 GO:GO:0046686 GO:GO:0021766 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG
GO:GO:0003854 GO:GO:0000166 GO:GO:0004769 GO:GO:0006702
Gene3D:3.40.50.720 OMA:MAGWSCL GO:GO:0005789 GO:GO:0031966
GO:GO:0033327 GO:GO:0051412 GO:GO:0010288
GeneTree:ENSGT00550000074557 EMBL:L17138 EMBL:BC089937
IPI:IPI00555268 PIR:A48769 RefSeq:NP_058961.4 RefSeq:XP_003749409.1
UniGene:Rn.109394 ProteinModelPortal:Q62878 STRING:Q62878
Ensembl:ENSRNOT00000026306 GeneID:100911154 GeneID:29632
KEGG:rno:100911154 KEGG:rno:29632 UCSC:RGD:67377 CTD:15497
InParanoid:Q62878 NextBio:609864 Genevestigator:Q62878
GermOnline:ENSRNOG00000019441 GO:GO:0030283 GO:GO:0006700
GO:GO:0034757 GO:GO:0034698 Uniprot:Q62878
Length = 373
Score = 134 (52.2 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 65/235 (27%), Positives = 101/235 (42%)
Query: 11 LITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASA 70
L+TGA GF+ + L+ ++ VLDK+ + S ++GD+
Sbjct: 7 LVTGAGGFLGQRIVQLLVQEKDLKEVRVLDKVFRPETREEFFNLGTSIKVTVLEGDILDT 66
Query: 71 DLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEACKITGQIKRFI 129
+ + I ++H AA +D + N + + N+ GT LLEAC + + FI
Sbjct: 67 QCLR--RACQGISVVIHTAAL--IDVTGVNPRQTILDVNLKGTQNLLEAC-VQASVPAFI 121
Query: 130 HVSTDEVYGETDEDAVVGN-HEASQLLPT--NPYSATKAGAEMLVMAYGRSY----G-LP 181
+ ST +V G ++ N HE T NPY +K AE V+A S G L
Sbjct: 122 YCSTVDVAGPNSYKKIILNGHEEEHHESTWSNPYPYSKKMAEKAVLAANGSILKNGGTLH 181
Query: 182 VITTRGNNVYGPNQFPEKLIPKFILLAMKGKP-LPIHGDGSNVRSYLYCEDVAEA 235
R +YG P + IL A+K K L + G S + + +Y +VA A
Sbjct: 182 TCALRPMYIYGERS-P--FLSVMILAALKSKGILNVTGKFS-IANPVYVGNVAWA 232
Score = 59 (25.8 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 299 KQLGWYERVTWEEGLQKTMKW 319
+ LG+ V+WEE QKT +W
Sbjct: 336 RDLGYKPLVSWEEAKQKTSEW 356
Score = 38 (18.4 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 313 LQKTMKWYISNPDWWGDVSGALLPHPRTSMAPAIEGKVDG 352
L T K+ I+NP + G+V+ A + R P V G
Sbjct: 212 LNVTGKFSIANPVYVGNVAWAHILAARGLRDPKKSQNVQG 251
>UNIPROTKB|F6Z8R0 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:13616
"Monodelphis domestica" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0070401 "NADP+ binding" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
Ensembl:ENSMODT00000010461 Uniprot:F6Z8R0
Length = 347
Score = 147 (56.8 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 54/180 (30%), Positives = 84/180 (46%)
Query: 8 KNILITGAAGFIASHVCNRLIGN-YPEYKIVVLDKLDYCSNLKNL--NP-SRLSPNFKFI 63
K LITG G S++ L+ Y + IV +++L NP + + N K
Sbjct: 24 KVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLH 83
Query: 64 KGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEACKIT 122
GD+ + + I+ K I + AQ+HV SF + E+T + + GT LL+A K
Sbjct: 84 YGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDGVGTLRLLDAIKTC 142
Query: 123 GQIK--RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 180
G I +F ST E+YG+ E + E + P +PY A K A +V+ + +Y L
Sbjct: 143 GLINSVKFYQASTSELYGKVQE---IPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNL 199
>RGD|1308676 [details] [associations]
symbol:Hsd3b2 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 2" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA;ISO;IDA] [GO:0004769 "steroid delta-isomerase
activity" evidence=ISO;IDA] [GO:0005496 "steroid binding"
evidence=IPI] [GO:0005739 "mitochondrion" evidence=ISO] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0006082 "organic
acid metabolic process" evidence=IEP] [GO:0006694 "steroid
biosynthetic process" evidence=IEA;ISO] [GO:0006701 "progesterone
biosynthetic process" evidence=IEP;IDA] [GO:0006703 "estrogen
biosynthetic process" evidence=IEP] [GO:0008202 "steroid metabolic
process" evidence=IDA] [GO:0008207 "C21-steroid hormone metabolic
process" evidence=IDA] [GO:0008584 "male gonad development"
evidence=IEP] [GO:0008585 "female gonad development" evidence=IEP]
[GO:0009635 "response to herbicide" evidence=IEP] [GO:0010033
"response to organic substance" evidence=IEP] [GO:0010038 "response
to metal ion" evidence=IEP] [GO:0010226 "response to lithium ion"
evidence=IEP] [GO:0010288 "response to lead ion" evidence=IEP]
[GO:0014070 "response to organic cyclic compound" evidence=IEP]
[GO:0014823 "response to activity" evidence=IEP] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016101 "diterpenoid
metabolic process" evidence=IEP] [GO:0017143 "insecticide metabolic
process" evidence=IEP] [GO:0018879 "biphenyl metabolic process"
evidence=IEP] [GO:0018894 "dibenzo-p-dioxin metabolic process"
evidence=IEP] [GO:0018958 "phenol-containing compound metabolic
process" evidence=IEP] [GO:0018970 "toluene metabolic process"
evidence=IEP] [GO:0021766 "hippocampus development" evidence=IEP]
[GO:0030061 "mitochondrial crista" evidence=IDA] [GO:0030325
"adrenal gland development" evidence=IEP] [GO:0030728 "ovulation"
evidence=IEP] [GO:0030851 "granulocyte differentiation"
evidence=IEP] [GO:0031667 "response to nutrient levels"
evidence=IEP] [GO:0032355 "response to estradiol stimulus"
evidence=IEP] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEP] [GO:0033197 "response to vitamin E" evidence=IEP]
[GO:0033327 "Leydig cell differentiation" evidence=IEP] [GO:0033591
"response to L-ascorbic acid" evidence=IEP] [GO:0035410
"dihydrotestosterone 17-beta-dehydrogenase activity" evidence=IDA]
[GO:0042493 "response to drug" evidence=IEP] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
[GO:0043279 "response to alkaloid" evidence=IEP] [GO:0044344
"cellular response to fibroblast growth factor stimulus"
evidence=IEP] [GO:0045471 "response to ethanol" evidence=IEP]
[GO:0046470 "phosphatidylcholine metabolic process" evidence=IEP]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
[GO:0050756 "fractalkine metabolic process" evidence=IEP]
[GO:0051287 "NAD binding" evidence=IDA] [GO:0051412 "response to
corticosterone stimulus" evidence=IEP] [GO:0051592 "response to
calcium ion" evidence=IEP] [GO:0060135 "maternal process involved
in female pregnancy" evidence=IEP] [GO:0060992 "response to
fungicide" evidence=IEP] [GO:0061370 "testosterone biosynthetic
process" evidence=IEP] [GO:0070301 "cellular response to hydrogen
peroxide" evidence=IEP] [GO:0070542 "response to fatty acid"
evidence=IEP] [GO:0071236 "cellular response to antibiotic"
evidence=IEP] [GO:0071288 "cellular response to mercury ion"
evidence=IEP] [GO:0071320 "cellular response to cAMP" evidence=IEP]
[GO:0071333 "cellular response to glucose stimulus" evidence=IEP]
[GO:0071371 "cellular response to gonadotropin stimulus"
evidence=IEP] [GO:0071372 "cellular response to
follicle-stimulating hormone stimulus" evidence=IEP] [GO:0071373
"cellular response to luteinizing hormone stimulus" evidence=IEP]
[GO:0071406 "cellular response to methylmercury" evidence=IEP]
[GO:0071549 "cellular response to dexamethasone stimulus"
evidence=IEP] [GO:0071560 "cellular response to transforming growth
factor beta stimulus" evidence=IEP] InterPro:IPR002225 Pfam:PF01073
UniPathway:UPA00062 InterPro:IPR016040 RGD:1308676 GO:GO:0016021
GO:GO:0046686 GO:GO:0021766 CTD:3283 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 GO:GO:0003854
GO:GO:0004769 GO:GO:0006703 Gene3D:3.40.50.720 GO:GO:0005789
EMBL:M38178 EMBL:BC086578 EMBL:DQ515797 IPI:IPI00362470 PIR:A39051
RefSeq:NP_001007720.3 UniGene:Rn.128814 ProteinModelPortal:P22071
STRING:P22071 Ensembl:ENSRNOT00000026325 GeneID:360348
KEGG:rno:360348 UCSC:RGD:1308676 InParanoid:P22071 OMA:WVFPRIA
BRENDA:5.3.3.1 NextBio:672781 ArrayExpress:P22071
Genevestigator:P22071 GermOnline:ENSRNOG00000019454 GO:GO:0030061
GO:GO:0035410 GO:GO:0051287 GO:GO:0005496 GO:GO:0030325
GO:GO:0018879 GO:GO:0071236 GO:GO:0071320 GO:GO:0071549
GO:GO:0044344 GO:GO:0071372 GO:GO:0071333 GO:GO:0070301
GO:GO:0032869 GO:GO:0071373 GO:GO:0071288 GO:GO:0071406
GO:GO:0071560 GO:GO:0018894 GO:GO:0016101 GO:GO:0008585
GO:GO:0050756 GO:GO:0030851 GO:GO:0017143 GO:GO:0033327
GO:GO:0060135 GO:GO:0006082 GO:GO:0030728 GO:GO:0018958
GO:GO:0046470 GO:GO:0006701 GO:GO:0014823 GO:GO:0043279
GO:GO:0046685 GO:GO:0051592 GO:GO:0051412 GO:GO:0042493
GO:GO:0032355 GO:GO:0045471 GO:GO:0070542 GO:GO:0060992
GO:GO:0009635 GO:GO:0033591 GO:GO:0010288 GO:GO:0010226
GO:GO:0033197 GO:GO:0061370 GO:GO:0018970 Uniprot:P22071
Length = 373
Score = 132 (51.5 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 60/234 (25%), Positives = 97/234 (41%)
Query: 11 LITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASA 70
L+TGA GF+ + L+ ++ LDK+ + + + ++GD+ A
Sbjct: 7 LVTGAGGFVGQRIIRMLVQEKELQEVRALDKVFRPETKEEFSKLQTKAKVTMLEGDILDA 66
Query: 71 DLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIH 130
+ + I ++H AA V + N+ GT +LEAC + + FI+
Sbjct: 67 QYLR--RACQGISVVIHTAAVIDVSHVLPRQ-TILDVNLKGTQNILEAC-VEASVPAFIY 122
Query: 131 VSTDEVYGETDEDAVVGN-HEASQLLPT--NPYSATKAGAEMLVMAYGRSY----G-LPV 182
ST +V G ++ N HE T + Y +K AE V+A S G L
Sbjct: 123 CSTVDVAGPNSYKKIILNGHEEEHHESTWSDAYPYSKRMAEKAVLAANGSILKNGGTLHT 182
Query: 183 ITTRGNNVYGPNQFPEKLIPKFILLAMKGKP-LPIHGDGSNVRSYLYCEDVAEA 235
R +YG P + IL A+K K L + G S + + +Y +VA A
Sbjct: 183 CALRPMYIYGERS-P--FLSVMILAALKNKGILNVTGKFS-IANPVYVGNVAWA 232
Score = 60 (26.2 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 299 KQLGWYERVTWEEGLQKTMKW 319
+ LG+ V+WEE QKT +W
Sbjct: 336 RDLGYVPLVSWEEAKQKTSEW 356
Score = 38 (18.4 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 313 LQKTMKWYISNPDWWGDVSGALLPHPRTSMAPAIEGKVDG 352
L T K+ I+NP + G+V+ A + R P V G
Sbjct: 212 LNVTGKFSIANPVYVGNVAWAHILAARGLRDPKKSQNVQG 251
>MGI|MGI:1891112 [details] [associations]
symbol:Gmds "GDP-mannose 4, 6-dehydratase" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=ISO] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISO]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISO] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0070401 "NADP+ binding" evidence=ISO] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 MGI:MGI:1891112 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
HOVERGEN:HBG000727 CTD:2762 OrthoDB:EOG4FXR7M EMBL:AL645643
EMBL:AL645664 EMBL:AL645697 EMBL:AL645783 EMBL:AL645763
EMBL:BC031788 EMBL:BC093502 IPI:IPI00169546 RefSeq:NP_666153.1
UniGene:Mm.247143 ProteinModelPortal:Q8K0C9 SMR:Q8K0C9
STRING:Q8K0C9 PhosphoSite:Q8K0C9 PaxDb:Q8K0C9 PRIDE:Q8K0C9
Ensembl:ENSMUST00000041859 GeneID:218138 KEGG:mmu:218138
UCSC:uc007pzq.1 InParanoid:Q8K0C9 NextBio:376160 Bgee:Q8K0C9
CleanEx:MM_GMDS Genevestigator:Q8K0C9 GermOnline:ENSMUSG00000038372
Uniprot:Q8K0C9
Length = 372
Score = 147 (56.8 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 54/180 (30%), Positives = 84/180 (46%)
Query: 8 KNILITGAAGFIASHVCNRLIGN-YPEYKIVVLDKLDYCSNLKNL--NP-SRLSPNFKFI 63
K LITG G S++ L+ Y + IV +++L NP + + N K
Sbjct: 24 KVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLH 83
Query: 64 KGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEACKIT 122
GD+ + + I+ K I + AQ+HV SF + E+T + + GT LL+A K
Sbjct: 84 YGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDGVGTLRLLDAIKTC 142
Query: 123 GQIK--RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 180
G I +F ST E+YG+ E + E + P +PY A K A +V+ + +Y L
Sbjct: 143 GLINSVKFYQASTSELYGKVQE---IPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNL 199
>RGD|1311008 [details] [associations]
symbol:Gmds "GDP-mannose 4, 6-dehydratase" species:10116 "Rattus
norvegicus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISO;ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISO;ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISO;ISS]
[GO:0070401 "NADP+ binding" evidence=ISO;ISS] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040 RGD:1311008
Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622 GO:GO:0070401
EMBL:CH473977 GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711
GO:GO:0008446 TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 OMA:IAYNLTD HOVERGEN:HBG000727
CTD:2762 OrthoDB:EOG4FXR7M EMBL:BC104708 IPI:IPI00362967
RefSeq:NP_001034695.1 UniGene:Rn.212995 SMR:Q3MHS7 STRING:Q3MHS7
Ensembl:ENSRNOT00000023691 GeneID:291095 KEGG:rno:291095
UCSC:RGD:1311008 InParanoid:Q3MHS7 NextBio:632111
Genevestigator:Q3MHS7 Uniprot:Q3MHS7
Length = 372
Score = 147 (56.8 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 54/180 (30%), Positives = 84/180 (46%)
Query: 8 KNILITGAAGFIASHVCNRLIGN-YPEYKIVVLDKLDYCSNLKNL--NP-SRLSPNFKFI 63
K LITG G S++ L+ Y + IV +++L NP + + N K
Sbjct: 24 KVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLH 83
Query: 64 KGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEACKIT 122
GD+ + + I+ K I + AQ+HV SF + E+T + + GT LL+A K
Sbjct: 84 YGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDGVGTLRLLDAIKTC 142
Query: 123 GQIK--RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 180
G I +F ST E+YG+ E + E + P +PY A K A +V+ + +Y L
Sbjct: 143 GLINSVKFYQASTSELYGKVQE---IPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNL 199
>WB|WBGene00010166 [details] [associations]
symbol:gmd-2 species:6239 "Caenorhabditis elegans"
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA;IDA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0008831 "dTDP-4-dehydrorhamnose reductase
activity" evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0018991
"oviposition" evidence=IMP] [GO:0042350 "GDP-L-fucose biosynthetic
process" evidence=IDA] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0040007
GO:GO:0018991 GO:GO:0002119 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0010171 GO:GO:0040011 GO:GO:0005622
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 GO:GO:0042350 OMA:DAIRDWG EMBL:Z81553
EMBL:AM231685 PIR:T22798 RefSeq:NP_493106.1 UniGene:Cel.18597
ProteinModelPortal:O45583 SMR:O45583 STRING:O45583 PaxDb:O45583
EnsemblMetazoa:F56H6.5 GeneID:186416 KEGG:cel:CELE_F56H6.5
UCSC:F56H6.5 CTD:186416 WormBase:F56H6.5 InParanoid:O45583
NextBio:931756 Uniprot:O45583
Length = 382
Score = 147 (56.8 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 52/180 (28%), Positives = 85/180 (47%)
Query: 8 KNILITGAAGFIASHVCNRLIGN-YPEYKIVVLDKLDYCSNLKNL--NP--SRLSPNFKF 62
K LITG G S++ L+ Y + I+ + +++L NP S +F
Sbjct: 34 KVALITGITGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYGNPVTHNGSASFSL 93
Query: 63 IKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEA--- 118
GD+ + + ++ T + I H AAQ+HV SF E+T + GT LL+A
Sbjct: 94 HYGDMTDSSCLIKLISTIEPTEIYHLAAQSHVKVSFDLP-EYTAEVDAVGTLRLLDAIHA 152
Query: 119 CKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY 178
C++T ++ RF ST E+YG+ E + E + P +PY+ K +V+ Y +Y
Sbjct: 153 CRLTEKV-RFYQASTSELYGKVQE---IPQSELTPFYPRSPYAVAKMYGYWIVVNYREAY 208
>UNIPROTKB|O45583 [details] [associations]
symbol:gmd-2 "GDP-mannose 4,6 dehydratase 2" species:6239
"Caenorhabditis elegans" [GO:0019673 "GDP-mannose metabolic
process" evidence=IDA] [GO:0008446 "GDP-mannose 4,6-dehydratase
activity" evidence=IDA] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0040007
GO:GO:0018991 GO:GO:0002119 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0010171 GO:GO:0040011 GO:GO:0005622
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 GO:GO:0042350 OMA:DAIRDWG EMBL:Z81553
EMBL:AM231685 PIR:T22798 RefSeq:NP_493106.1 UniGene:Cel.18597
ProteinModelPortal:O45583 SMR:O45583 STRING:O45583 PaxDb:O45583
EnsemblMetazoa:F56H6.5 GeneID:186416 KEGG:cel:CELE_F56H6.5
UCSC:F56H6.5 CTD:186416 WormBase:F56H6.5 InParanoid:O45583
NextBio:931756 Uniprot:O45583
Length = 382
Score = 147 (56.8 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 52/180 (28%), Positives = 85/180 (47%)
Query: 8 KNILITGAAGFIASHVCNRLIGN-YPEYKIVVLDKLDYCSNLKNL--NP--SRLSPNFKF 62
K LITG G S++ L+ Y + I+ + +++L NP S +F
Sbjct: 34 KVALITGITGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYGNPVTHNGSASFSL 93
Query: 63 IKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEA--- 118
GD+ + + ++ T + I H AAQ+HV SF E+T + GT LL+A
Sbjct: 94 HYGDMTDSSCLIKLISTIEPTEIYHLAAQSHVKVSFDLP-EYTAEVDAVGTLRLLDAIHA 152
Query: 119 CKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY 178
C++T ++ RF ST E+YG+ E + E + P +PY+ K +V+ Y +Y
Sbjct: 153 CRLTEKV-RFYQASTSELYGKVQE---IPQSELTPFYPRSPYAVAKMYGYWIVVNYREAY 208
>UNIPROTKB|Q6P621 [details] [associations]
symbol:gmds "GDP-mannose 4,6-dehydratase" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0070401 "NADP+ binding" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 OMA:IAYNLTD HOVERGEN:HBG000727
OrthoDB:EOG4FXR7M EMBL:AAMC01033108 EMBL:AAMC01033109
EMBL:AAMC01033110 EMBL:AAMC01033111 EMBL:AAMC01033112
EMBL:AAMC01033113 EMBL:AAMC01033114 EMBL:AAMC01033115
EMBL:AAMC01033116 EMBL:AAMC01033117 EMBL:AAMC01033118
EMBL:AAMC01033119 EMBL:AAMC01033120 EMBL:AAMC01033121
EMBL:AAMC01033122 EMBL:AAMC01033123 EMBL:AAMC01033124
EMBL:AAMC01033125 EMBL:AAMC01033126 EMBL:AAMC01033127
EMBL:AAMC01033128 EMBL:AAMC01033129 EMBL:AAMC01033130
EMBL:AAMC01033131 EMBL:AAMC01033132 EMBL:BC062513 UniGene:Str.7169
ProteinModelPortal:Q6P621 STRING:Q6P621 Ensembl:ENSXETT00000001321
Xenbase:XB-GENE-943015 InParanoid:Q6P621 Bgee:Q6P621 Uniprot:Q6P621
Length = 383
Score = 147 (56.8 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 54/180 (30%), Positives = 84/180 (46%)
Query: 8 KNILITGAAGFIASHVCNRLIGN-YPEYKIVVLDKLDYCSNLKNL--NP-SRLSPNFKFI 63
K LITG G S++ L+ Y + IV +++L NP + + N K
Sbjct: 35 KVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPHAHIEGNMKLH 94
Query: 64 KGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEACKIT 122
GD+ + + I+ K I + AQ+HV SF + E+T + + GT LL+A K
Sbjct: 95 YGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDGLGTLRLLDATKTC 153
Query: 123 GQIK--RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 180
G I +F ST E+YG+ E + E + P +PY A K A +V+ + +Y L
Sbjct: 154 GLINSVKFYQASTSELYGKVQE---IPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNL 210
>UNIPROTKB|B5XE59 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:8030
"Salmo salar" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
GO:GO:0008446 TIGRFAMs:TIGR01472 HOVERGEN:HBG000727 CTD:2762
EMBL:BT049328 RefSeq:NP_001134845.1 UniGene:Ssa.6439
ProteinModelPortal:B5XE59 GeneID:100196344 Uniprot:B5XE59
Length = 370
Score = 143 (55.4 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 53/183 (28%), Positives = 86/183 (46%)
Query: 7 PKNI-LITGAAGFIASHVCNRLIGN-YPEYKIVVLDKLDYCSNLKNL--NP-SRLSPNFK 61
P+ + +ITG G S++ L+ Y + I+ +++L NP + N K
Sbjct: 20 PRKVAVITGITGQDGSYLAEFLLEKGYEVHGILRRSSSFNTGRIEHLYQNPQTHTEGNMK 79
Query: 62 FIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEA-- 118
GD+ + + I+ K I + AQ+HV SF + E+T N + GT LL+A
Sbjct: 80 LHYGDLTDSTCLVKIINQVKPTEIYNLGAQSHVKISFELA-EYTANVDGVGTLRLLDAIK 138
Query: 119 -CKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS 177
C +T +K F ST E+YG+ E + E + P +PY A K A +V+ + +
Sbjct: 139 TCGLTNSVK-FYQASTSELYGKVQE---IPQKETTPFYPRSPYGAAKLYAYWIVVNFREA 194
Query: 178 YGL 180
Y L
Sbjct: 195 YNL 197
Score = 47 (21.6 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 26/100 (26%), Positives = 49/100 (49%)
Query: 218 GDGSNVRSYLYCEDVAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQ 277
G+ +VR ++ + TI+ +G+ + +G +E VI V D K + P T+
Sbjct: 274 GEVHSVREFVE-KSFKHVGKTIVWEGKDEN--EVGRCQETGVIHVKVD-SKYY--RP-TE 326
Query: 278 IKFVENRPFNDQRYFLDVQKLKQLGWYERVTWEEGLQKTM 317
+++++ D + L +LGW ++T+EE L K M
Sbjct: 327 VEYLQG----DS-----TKALTKLGWKAKITFEE-LVKEM 356
Score = 44 (20.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 14/46 (30%), Positives = 21/46 (45%)
Query: 485 TGCIF-EYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKE 529
TG I + D+K+ T + + + D K K EEL+KE
Sbjct: 310 TGVIHVKVDSKYYRPTEVEYLQGDSTKALTKLGWKAKITFEELVKE 355
>MGI|MGI:96235 [details] [associations]
symbol:Hsd3b3 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 3" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0004769 "steroid delta-isomerase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016616 "oxidoreductase activity,
acting on the CH-OH group of donors, NAD or NADP as acceptor"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 MGI:MGI:96235 GO:GO:0016021 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 OrthoDB:EOG4K3KWG
GO:GO:0005743 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0006694 OMA:WVFPRIA
GeneTree:ENSGT00550000074557 EMBL:M77015 IPI:IPI00111855
RefSeq:NP_001155214.1 RefSeq:NP_001155215.1 RefSeq:NP_001155216.1
RefSeq:NP_001155217.1 UniGene:Mm.158717 ProteinModelPortal:P26150
SMR:P26150 STRING:P26150 PaxDb:P26150 PRIDE:P26150
Ensembl:ENSMUST00000090743 Ensembl:ENSMUST00000107018
Ensembl:ENSMUST00000107019 GeneID:15494 KEGG:mmu:15494 CTD:15494
InParanoid:P26150 SABIO-RK:P26150 NextBio:288374 Bgee:P26150
Genevestigator:P26150 GermOnline:ENSMUSG00000062410 Uniprot:P26150
Length = 373
Score = 132 (51.5 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 63/234 (26%), Positives = 97/234 (41%)
Query: 11 LITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASA 70
L+TGA GF+ + L+ +I VLDK+ + S ++GD+
Sbjct: 7 LVTGAGGFLGQRIIQLLVQEKDLEEIRVLDKVFKPETREQFFNLGTSIKVTVLEGDIL-- 64
Query: 71 DLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIH 130
D + + I ++H AA V N+ GT LLEAC I + FI
Sbjct: 65 DTQYLRRACQGISVVIHTAAIIDVTGVIPRQ-TILDVNLKGTQNLLEAC-IQASVPAFIF 122
Query: 131 VSTDEVYGETD-EDAVVGNHEASQLLPT--NPYSATKAGAEMLVMAYGRSY----G-LPV 182
S+ +V G +D V+ HE T +PY +K AE V+A S G L
Sbjct: 123 SSSVDVAGPNSYKDIVLNGHEDEHRESTWSDPYPYSKKMAEKAVLAANGSMLKNGGTLQT 182
Query: 183 ITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGS-NVRSYLYCEDVAEA 235
R +YG + + I+ A+K K + + G G + + +Y +VA A
Sbjct: 183 CALRPMCIYGERS---QFLSNTIIKALKNKFI-LRGGGKFSTANPVYVGNVAWA 232
Score = 59 (25.8 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 299 KQLGWYERVTWEEGLQKTMKW 319
+ LG+ V+WEE QKT +W
Sbjct: 336 RDLGYEPLVSWEEAKQKTSEW 356
>UNIPROTKB|Q3T105 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 KO:K01784
GeneTree:ENSGT00530000063128 OMA:ADKAWNA CTD:2582
HOVERGEN:HBG001396 OrthoDB:EOG4B5P5D EMBL:DAAA02006426
EMBL:BC102185 IPI:IPI00686007 RefSeq:NP_001193137.1
UniGene:Bt.12474 SMR:Q3T105 STRING:Q3T105
Ensembl:ENSBTAT00000006586 GeneID:523154 KEGG:bta:523154
InParanoid:Q3T105 NextBio:20873677 Uniprot:Q3T105
Length = 348
Score = 105 (42.0 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 40/171 (23%), Positives = 67/171 (39%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRL-------SPNF 60
+ +L+TG AG+I SH L+ Y +V+D P L +
Sbjct: 3 EKVLVTGGAGYIGSHTVLELLE--AGYSPMVIDNFHNAIRGGGSMPESLRRVQDLTGRSV 60
Query: 61 KFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 120
+F + D+ + + ++HFA V S ++ + N+ GT LLE +
Sbjct: 61 EFEEMDILDQAALQRLFKKHSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMR 120
Query: 121 ITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 171
G +K + S+ VYG + H TNPY +K E ++
Sbjct: 121 AHG-VKNLVFSSSATVYGNPQYLPLDEAHPTGGC--TNPYGKSKFFIEEMI 168
Score = 87 (35.7 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 35/147 (23%), Positives = 62/147 (42%)
Query: 193 PNQFPEKLIPKFILLAM-KGKPLPIHG------DGSNVRSYLYCEDVAEAFDTILHK--G 243
P P L+P +A+ + + L + G DG+ VR Y++ D+A+ L K
Sbjct: 201 PQGIPNNLMPYVSQVAIGRREVLNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKE 260
Query: 244 EVG-HVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQ-KLKQL 301
+ G +YN+GT V+ + + K + K V R + + + LK+L
Sbjct: 261 QCGCRIYNLGTGTGYSVLQMVQAMEK--ASGKKIPYKVVARREGDVAACYANPSLALKEL 318
Query: 302 GWYERVTWEEGLQKTMKWYISNPDWWG 328
GW + + + +W NP +G
Sbjct: 319 GWSAALGLDRMCEDLWRWQKQNPSGFG 345
>UNIPROTKB|P0AC88 [details] [associations]
symbol:gmd "GDP-mannose 4,6-dehydratase" species:83333
"Escherichia coli K-12" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=IEA]
[GO:0009242 "colanic acid biosynthetic process" evidence=IEA]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 UniPathway:UPA00980 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0005622 GO:GO:0009103 GO:GO:0019673 GO:GO:0042351 EMBL:U38473
GO:GO:0009242 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 PIR:D64971 RefSeq:NP_416557.1 RefSeq:YP_490295.1
PDB:1DB3 PDBsum:1DB3 ProteinModelPortal:P0AC88 SMR:P0AC88
DIP:DIP-48216N IntAct:P0AC88 EnsemblBacteria:EBESCT00000004343
EnsemblBacteria:EBESCT00000015616 GeneID:12930696 GeneID:946562
KEGG:ecj:Y75_p2016 KEGG:eco:b2053 PATRIC:32119439 EchoBASE:EB1735
EcoGene:EG11787 HOGENOM:HOG000168003 ProtClustDB:CLSK880276
BioCyc:EcoCyc:GDPMANDEHYDRA-MONOMER
BioCyc:ECOL316407:JW2038-MONOMER
BioCyc:MetaCyc:GDPMANDEHYDRA-MONOMER EvolutionaryTrace:P0AC88
Genevestigator:P0AC88 Uniprot:P0AC88
Length = 373
Score = 146 (56.5 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 52/181 (28%), Positives = 82/181 (45%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN-----PSRLSPNFKF 62
K LITG G S++ L+ Y++ + + N + ++ P +P F
Sbjct: 3 KVALITGVTGQDGSYLAEFLLEK--GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHL 60
Query: 63 IKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEACKI 121
GD++ + IL + D + + A +HV SF S E+T + + GT LLEA +
Sbjct: 61 HYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSF-ESPEYTADVDAMGTLRLLEAIRF 119
Query: 122 TGQIK--RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG 179
G K RF ST E+YG E + E + P +PY+ K A + + Y SYG
Sbjct: 120 LGLEKKTRFYQASTSELYGLVQE---IPQKETTPFYPRSPYAVAKLYAYWITVNYRESYG 176
Query: 180 L 180
+
Sbjct: 177 M 177
>UNIPROTKB|Q4K8N6 [details] [associations]
symbol:wbpM "Nucleotide sugar epimerase/dehydratase WbpM"
species:220664 "Pseudomonas protegens Pf-5" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR003869 Pfam:PF02719
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0000271 GO:GO:0016857
eggNOG:COG1086 HOGENOM:HOG000257078 OMA:HVPMVEH RefSeq:YP_261397.1
ProteinModelPortal:Q4K8N6 STRING:Q4K8N6 GeneID:3478429
KEGG:pfl:PFL_4305 PATRIC:19878030 ProtClustDB:CLSK867780
BioCyc:PFLU220664:GIX8-4340-MONOMER Uniprot:Q4K8N6
Length = 664
Score = 149 (57.5 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 74/299 (24%), Positives = 129/299 (43%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDY--CSNLKNLNPSRLSPNFKFIK- 64
+ +L+TGA G I S +C +++ P +++LD ++ S L L R+S + +K
Sbjct: 298 QTVLVTGAGGSIGSELCRQILLQGPS-TLILLDHSEFNLYSILSELE-QRVSRESRLVKL 355
Query: 65 ----GDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 120
G V + + + ++ T +DT+ H AA HV N E NN+ GT +A
Sbjct: 356 LPILGSVRNYEKLLSVMRTWSVDTVYHAAAYKHVPMVEHNIAEGVLNNVMGTLNTAQAAL 415
Query: 121 ITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEML---VMAYGRS 177
G + F+ +STD+ T+ V+G+ +L + +K A +L + R
Sbjct: 416 QCG-VANFVLISTDKAVRPTN---VMGS--TKRLAELTLQALSKELAPVLFDDLSNVSRV 469
Query: 178 YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFD 237
R NV G + +IP F G PL + ++ + Y + EA
Sbjct: 470 NKTRFTMVRFGNVLGSSG---SVIPLFHKQIKSGGPLTV----THPKITRYFMTIPEAAQ 522
Query: 238 TILHKGEVGH---VYNIGTKKERRVIDVATDICKLFSL------NP--DTQIKFVENRP 285
++ G +G V+ + + R++++A + L L NP D I+F RP
Sbjct: 523 LVIQAGSMGQGGDVFVLDMGEPVRIVELAEKMIHLSGLSVRSEKNPHGDIAIEFTGLRP 581
>UNIPROTKB|Q3MHF2 [details] [associations]
symbol:HSD3B7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016853 "isomerase activity" evidence=IEA] [GO:0006694
"steroid biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
CTD:80270 KO:K12408 OMA:PCGLRLV OrthoDB:EOG4N5VX7 GO:GO:0016853
EMBL:DAAA02057919 EMBL:BC105259 EMBL:BT030700 IPI:IPI00692623
RefSeq:NP_001029868.1 UniGene:Bt.7734 STRING:Q3MHF2
Ensembl:ENSBTAT00000003028 GeneID:540229 KEGG:bta:540229
InParanoid:Q3MHF2 NextBio:20878503 Uniprot:Q3MHF2
Length = 368
Score = 144 (55.7 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 62/196 (31%), Positives = 91/196 (46%)
Query: 11 LITGAAGFIASHVCNRLIGNYP---EYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
L+TG GF+ HV L+ P E +I L + LK P +++ I+GDV
Sbjct: 13 LVTGGCGFLGEHVVRMLLQREPRLRELRIFDLHLGPWLEELKT-GPVQVTA----IQGDV 67
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKN--NIYGTHVLLEACKITGQI 125
A V + + ++H A V FG + T + N+ GT ++EAC TG
Sbjct: 68 TQAHEVAAAVAGAHV--VIHTAGLVDV---FGKTSPETIHEVNVQGTQNVIEACVQTGT- 121
Query: 126 KRF-IHVSTDEVYGET--DEDAVVGNHEAS-QLLPTNPYSATKAGAEMLVM-AYGRSY-- 178
RF I+ S+ EV G + GN + + +PY +KA AE LV+ A GR
Sbjct: 122 -RFLIYTSSMEVVGPNIKGQPFYRGNENTPYEAVHRHPYPCSKALAEQLVLEANGREVLG 180
Query: 179 GLPVITT--RGNNVYG 192
GLP++T R +YG
Sbjct: 181 GLPLVTCALRPTGIYG 196
Score = 44 (20.5 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 299 KQLGWYERVTWEEGLQKTMKW 319
+ G+ +WEE +T++W
Sbjct: 340 RHFGYEPLFSWEESRTRTIRW 360
>TIGR_CMR|CBU_0689 [details] [associations]
symbol:CBU_0689 "GDP-mannose 4,6-dehydratase"
species:227377 "Coxiella burnetii RSA 493" [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 GenomeReviews:AE016828_GR GO:GO:0019673 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 HSSP:P93031 EMBL:AF387640
ProteinModelPortal:Q93N54 SMR:Q93N54 PRIDE:Q93N54 PATRIC:17930061
ProtClustDB:CLSK914242 BioCyc:CBUR227377:GJ7S-687-MONOMER
Uniprot:Q93N54
Length = 348
Score = 144 (55.7 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 82/325 (25%), Positives = 135/325 (41%)
Query: 8 KNILITGAAGFIASHVCNRLIG-NYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFK-FIK- 64
K ITG G S++ L+ +Y + ++ L ++ + N + F+
Sbjct: 3 KKAFITGITGQDGSYLAELLLRKDYEVHGMIRRSSSFNTERLSDIYEEKHKENARLFLHY 62
Query: 65 GDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNI-YGTHVLLEACKITG 123
GD+ +++ ++ K + + AAQ+HV SF +T I GT +LEA K
Sbjct: 63 GDITDGLVLNKLIHEIKPHEVYNLAAQSHVRVSFDIPV-YTMETIGLGTLNILEAIKNAD 121
Query: 124 QIK--RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 181
K RF S+ E+YG+ V E++ P +PY+ K A + Y SYGL
Sbjct: 122 NAKEIRFYQASSSEMYGDVKS---VPQTESTPFNPRSPYACAKVFAHYQTINYRESYGLH 178
Query: 182 VITTRGNNVYGPNQ---FPEKLIPKFILLAMKGKPLPIH-GDGSNVRSYLYCEDVAEAFD 237
T N P + F + I I + G I+ G+ R + Y +D EA
Sbjct: 179 ASTGILFNHESPRRGETFVTRKITSGIAKILAGLEKKIYLGNLEAKRDWGYAKDYVEAMW 238
Query: 238 TILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLN-PDTQI---KFVENRPFNDQRYFL 293
+L + + Y I T + V ++ L +LN D + K+ RP
Sbjct: 239 LMLQQ-DTPDDYVIATGETWSVKELLEYSFNLVNLNWRDFVVIDPKYY--RPAEVDLLLG 295
Query: 294 DVQKLKQ-LGWYERVTWEEGLQKTM 317
+ +K K+ LGW ++ + L K M
Sbjct: 296 EPKKAKEKLGWQPNTSFHK-LIKIM 319
>UNIPROTKB|I3LIF3 [details] [associations]
symbol:HSD3B7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00550000074557 OMA:PCGLRLV EMBL:CU914342
Ensembl:ENSSSCT00000029053 Uniprot:I3LIF3
Length = 363
Score = 137 (53.3 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 60/191 (31%), Positives = 88/191 (46%)
Query: 11 LITGAAGFIASHVCNRLIGNYPEY-KIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
L+TG GF+ HV L+ P ++ V D L L+ L + I+GDV
Sbjct: 13 LVTGGCGFLGEHVVRMLLQQEPRLCELRVFD-LHLGPWLEELETGPVQVTA--IQGDVTQ 69
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKN--NIYGTHVLLEACKITGQIKR 127
A V + + ++H A V FG + T + N+ GT ++EAC G R
Sbjct: 70 AHEVAAAVAGAHV--VIHTAGLVDV---FGRASPETIHEVNVQGTQNVIEACVQNGT--R 122
Query: 128 F-IHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVM-AYGRSY--GLPVI 183
F ++ S+ EV G T +EA+ +PY +KA AE LV+ A GR GLP++
Sbjct: 123 FLVYTSSMEVVGPTTRGNENTPYEAAH---RHPYPRSKALAERLVLEANGRKVRGGLPLV 179
Query: 184 TT--RGNNVYG 192
T R +YG
Sbjct: 180 TCALRPTGIYG 190
Score = 50 (22.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 298 LKQLGWYERVTWEEGLQKTMKWYISNPD 325
L+ G+ +WEE +T++W + D
Sbjct: 333 LRHFGYEPLFSWEESRARTIRWVQAGED 360
>UNIPROTKB|F1NWE5 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 GO:GO:0019388
GeneTree:ENSGT00530000063128 OMA:ADKAWNA EMBL:AADN02043722
EMBL:AADN02043721 IPI:IPI00604262 Ensembl:ENSGALT00000006441
Uniprot:F1NWE5
Length = 351
Score = 143 (55.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 65/260 (25%), Positives = 104/260 (40%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLS-------PNF 60
+ IL+TG AG+I SH +L Y+ VV+D L + P L
Sbjct: 7 ERILVTGGAGYIGSHCVLQLAE--AGYEPVVIDNLRNAARGPGALPESLQRVQRIAQTPI 64
Query: 61 KFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 120
F + D+ + + T + +MHFA V S E+ N+ GT LLEA +
Sbjct: 65 AFQELDITDGAALRKLFSTHRFSGVMHFAGLKAVGESVRRPLEYYNVNLTGTIRLLEAME 124
Query: 121 ITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY-G 179
++ + S+ VYG+ + H TNPY +K E ++ ++ G
Sbjct: 125 AYS-VRNIVFSSSATVYGDPQYLPLDEKHPVGGC--TNPYGKSKYFIEEMIQDLCKAEKG 181
Query: 180 LPVITTRGNNVYG----------PNQFPEKLIPKFILLAM-KGKPLPIHG------DGSN 222
I R N G P P L+P +A+ + + L + G DG+
Sbjct: 182 WNAILLRYFNPIGAHESGMIGEDPQGIPNNLMPYVAQVAVGRQEFLSVFGNDYETADGTG 241
Query: 223 VRSYLYCEDVAEAFDTILHK 242
+R Y++ D+A+ L K
Sbjct: 242 IRDYIHVVDLAKGHIAALKK 261
>TIGR_CMR|CJE_1612 [details] [associations]
symbol:CJE_1612 "GDP-L-fucose synthetase" species:195099
"Campylobacter jejuni RM1221" [GO:0009242 "colanic acid
biosynthetic process" evidence=ISS] [GO:0050577 "GDP-L-fucose
synthase activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000025 GenomeReviews:CP000025_GR
HOGENOM:HOG000168011 KO:K02377 GO:GO:0050577 OMA:IHCAGRV
GO:GO:0042350 RefSeq:YP_179593.1 ProteinModelPortal:Q5HSZ2
STRING:Q5HSZ2 GeneID:3232240 KEGG:cjr:CJE1612 PATRIC:20045021
BioCyc:CJEJ195099:GJC0-1642-MONOMER Uniprot:Q5HSZ2
Length = 349
Score = 111 (44.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 30/127 (23%), Positives = 57/127 (44%)
Query: 206 LLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGHV---------YNIGTKKE 256
+L +K + I G G+ R +LY +D+A A I+ + H+ NIG +K
Sbjct: 221 ILGVKENSIEIWGSGNPKREFLYSDDLANACIHIMQNINIEHINKIDRDNPHINIGPEKN 280
Query: 257 RRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQLGWYERVTWEEGLQKT 316
+ ++A + + + + ++ ++P K+KQ+ W E+G++ T
Sbjct: 281 YSIKELAYLLKTVIQF--EGEFRYNLSKPDGTYEKLTCCDKIKQMNWQAYTKLEDGIRST 338
Query: 317 MKWYISN 323
WY SN
Sbjct: 339 FHWYKSN 345
Score = 77 (32.2 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 32/132 (24%), Positives = 52/132 (39%)
Query: 66 DVASADLVHFILLTEKIDTIMHFAAQTH-VDNSFGNSFEFTKNNIYGTHVLLEACKITGQ 124
D+ V F EK D + AA+ +D EF +N+ + ++ I
Sbjct: 41 DLTDQSAVKFFFEKEKPDFVFLCAAKLGGMDAHRKFRAEFIYDNLQIQNNVIHQSYINN- 99
Query: 125 IKRFIHVSTDEVYGETDEDAVVGNHEASQLLPT--NPYSATKAGAEMLVMAYGRSYGLPV 182
+K+ + +S+ VY E + S L PY+ K + AY YG+
Sbjct: 100 VKKLLFISSTSVYPEHASLPIKEECLLSGKLQYLHEPYAIAKIAGMKMCEAYSDRYGVNF 159
Query: 183 ITTRGNNVYGPN 194
I+ +YGPN
Sbjct: 160 ISVCPTTLYGPN 171
>WB|WBGene00000266 [details] [associations]
symbol:bre-1 species:6239 "Caenorhabditis elegans"
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA;IDA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0008831 "dTDP-4-dehydrorhamnose reductase
activity" evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0071688 "striated muscle myosin thick filament assembly"
evidence=IMP] [GO:0042350 "GDP-L-fucose biosynthetic process"
evidence=IDA] [GO:0055120 "striated muscle dense body"
evidence=IDA] [GO:0030017 "sarcomere" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 GO:GO:0005783 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0030017 GO:GO:0055120 GO:GO:0071688
GO:GO:0075015 GO:GO:0017085 GO:GO:0019673 GO:GO:0042351
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
EMBL:AM231683 EMBL:AM231684 EMBL:Z68215 PIR:T20182
RefSeq:NP_001076668.1 RefSeq:NP_001076669.1 RefSeq:NP_001076670.1
RefSeq:NP_501563.1 RefSeq:NP_501564.1 UniGene:Cel.13248
ProteinModelPortal:Q18801 SMR:Q18801 STRING:Q18801 PaxDb:Q18801
PRIDE:Q18801 EnsemblMetazoa:C53B4.7b GeneID:177717
KEGG:cel:CELE_C53B4.7 UCSC:C53B4.7a.1 CTD:177717 WormBase:C53B4.7a
WormBase:C53B4.7b WormBase:C53B4.7c WormBase:C53B4.7d
WormBase:C53B4.7e GeneTree:ENSGT00440000033640 InParanoid:Q18801
OMA:IAYNLTD NextBio:898062 GO:GO:0042350 Uniprot:Q18801
Length = 399
Score = 148 (57.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 64/253 (25%), Positives = 111/253 (43%)
Query: 1 MATVYTPKNILITGAAGFIASHVCNRLIGN-YPEYKIVVLDKLDYCSNLKNL--NP--SR 55
+A K LITG +G S++ L+ Y + I+ + +++L NP
Sbjct: 44 LAAFRARKVALITGISGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYSNPITHH 103
Query: 56 LSPNFKFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHV 114
+F GD+ + + ++ T + + H AAQ+HV SF E+T + GT
Sbjct: 104 GDSSFSLHYGDMTDSSCLIKLISTIEPTEVYHLAAQSHVKVSFDLP-EYTAEVDAVGTLR 162
Query: 115 LLEA---CKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 171
LL+A C++T ++ RF ST E+YG+ E + E + P +PY+ K +V
Sbjct: 163 LLDAIHACRLTEKV-RFYQASTSELYGKVQE---IPQSEKTPFYPRSPYAVAKMYGYWIV 218
Query: 172 MAYGRSYGLPVITTRGNNVYGPNQ---FPEKLIPKFILLAMKGKPLPIH-GDGSNVRSYL 227
+ Y +Y + N P + F + I + + G+ I G+ S +R +
Sbjct: 219 VNYREAYNMFACNGILFNHESPRRGETFVTRKITRSVAKISLGQQESIELGNLSALRDWG 278
Query: 228 YCEDVAEAFDTIL 240
+ + EA IL
Sbjct: 279 HAREYVEAMWRIL 291
Score = 39 (18.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 284 RPFNDQRYFLDVQKLKQ-LGWYERVTWEEGLQKTM 317
RP + + +K K+ LGW +VT E L K M
Sbjct: 352 RPTEVETLLGNAEKAKKTLGWEAKVTVPE-LVKEM 385
>UNIPROTKB|Q18801 [details] [associations]
symbol:bre-1 "GDP-mannose 4,6 dehydratase 1" species:6239
"Caenorhabditis elegans" [GO:0017085 "response to insecticide"
evidence=IMP] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IDA] [GO:0075015 "formation of infection structure on or
near host" evidence=IMP] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0005783
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0030017
GO:GO:0055120 GO:GO:0071688 GO:GO:0075015 GO:GO:0017085
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 EMBL:AM231683 EMBL:AM231684 EMBL:Z68215
PIR:T20182 RefSeq:NP_001076668.1 RefSeq:NP_001076669.1
RefSeq:NP_001076670.1 RefSeq:NP_501563.1 RefSeq:NP_501564.1
UniGene:Cel.13248 ProteinModelPortal:Q18801 SMR:Q18801
STRING:Q18801 PaxDb:Q18801 PRIDE:Q18801 EnsemblMetazoa:C53B4.7b
GeneID:177717 KEGG:cel:CELE_C53B4.7 UCSC:C53B4.7a.1 CTD:177717
WormBase:C53B4.7a WormBase:C53B4.7b WormBase:C53B4.7c
WormBase:C53B4.7d WormBase:C53B4.7e GeneTree:ENSGT00440000033640
InParanoid:Q18801 OMA:IAYNLTD NextBio:898062 GO:GO:0042350
Uniprot:Q18801
Length = 399
Score = 148 (57.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 64/253 (25%), Positives = 111/253 (43%)
Query: 1 MATVYTPKNILITGAAGFIASHVCNRLIGN-YPEYKIVVLDKLDYCSNLKNL--NP--SR 55
+A K LITG +G S++ L+ Y + I+ + +++L NP
Sbjct: 44 LAAFRARKVALITGISGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYSNPITHH 103
Query: 56 LSPNFKFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHV 114
+F GD+ + + ++ T + + H AAQ+HV SF E+T + GT
Sbjct: 104 GDSSFSLHYGDMTDSSCLIKLISTIEPTEVYHLAAQSHVKVSFDLP-EYTAEVDAVGTLR 162
Query: 115 LLEA---CKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 171
LL+A C++T ++ RF ST E+YG+ E + E + P +PY+ K +V
Sbjct: 163 LLDAIHACRLTEKV-RFYQASTSELYGKVQE---IPQSEKTPFYPRSPYAVAKMYGYWIV 218
Query: 172 MAYGRSYGLPVITTRGNNVYGPNQ---FPEKLIPKFILLAMKGKPLPIH-GDGSNVRSYL 227
+ Y +Y + N P + F + I + + G+ I G+ S +R +
Sbjct: 219 VNYREAYNMFACNGILFNHESPRRGETFVTRKITRSVAKISLGQQESIELGNLSALRDWG 278
Query: 228 YCEDVAEAFDTIL 240
+ + EA IL
Sbjct: 279 HAREYVEAMWRIL 291
Score = 39 (18.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 284 RPFNDQRYFLDVQKLKQ-LGWYERVTWEEGLQKTM 317
RP + + +K K+ LGW +VT E L K M
Sbjct: 352 RPTEVETLLGNAEKAKKTLGWEAKVTVPE-LVKEM 385
>UNIPROTKB|Q9N119 [details] [associations]
symbol:HSD3B "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase" species:9823 "Sus scrofa" [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0031966 "mitochondrial
membrane" evidence=IEA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0004769 "steroid delta-isomerase
activity" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 GO:GO:0016021 CTD:3283 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG
BRENDA:1.1.1.145 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
Gene3D:3.40.50.720 OMA:MAGWSCL GO:GO:0005789 GO:GO:0031966
GO:GO:0006694 GeneTree:ENSGT00550000074557 EMBL:AF232699
RefSeq:NP_001004049.1 UniGene:Ssc.14393 ProteinModelPortal:Q9N119
STRING:Q9N119 Ensembl:ENSSSCT00000007360 Ensembl:ENSSSCT00000033231
Ensembl:ENSSSCT00000036493 GeneID:445539 KEGG:ssc:445539
SABIO-RK:Q9N119 ArrayExpress:Q9N119 Uniprot:Q9N119
Length = 373
Score = 131 (51.2 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 47/167 (28%), Positives = 75/167 (44%)
Query: 11 LITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKF--IKGDVA 68
L+TG GF+ + + L+ +I VLDK+ + ++ S+L K ++GD+
Sbjct: 7 LVTGGGGFLGQRIVHLLLEEKDLQEIRVLDKV-FKPEVRE-EFSKLQSKIKLTMLEGDIL 64
Query: 69 SADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRF 128
+ + ++H A+ V N+ G K N+ GT +LLEAC + + F
Sbjct: 65 DEQCLKGAC--QGASVVIHTASIIDVVNAVGRE-TVMKVNVKGTQLLLEAC-VQASVPVF 120
Query: 129 IHVSTDEVYGETDEDAVVGNHEASQLLPTN---PYSATKAGAEMLVM 172
IH S+ EV G V+ N L T PY +K AE V+
Sbjct: 121 IHTSSIEVAGPNSYREVIQNACEEDRLETAWSAPYPLSKKLAEKAVL 167
Score = 56 (24.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 299 KQLGWYERVTWEEGLQKTMKW 319
+ LG+ TWEE QKT W
Sbjct: 336 RDLGYEPLFTWEEAKQKTKAW 356
>UNIPROTKB|Q8AVI1 [details] [associations]
symbol:gmds "Gmds-prov protein" species:8355 "Xenopus
laevis" [GO:0005575 "cellular_component" evidence=ND] [GO:0007219
"Notch signaling pathway" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0019673 "GDP-mannose
metabolic process" evidence=ISS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401 "NADP+
binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 KO:K01711
GO:GO:0008446 TIGRFAMs:TIGR01472 HOVERGEN:HBG000727 CTD:2762
HSSP:P32054 EMBL:BC042270 EMBL:BC111472 RefSeq:NP_001080352.1
UniGene:Xl.10260 SMR:Q8AVI1 GeneID:380044 KEGG:xla:380044
Xenbase:XB-GENE-943021 Uniprot:Q8AVI1
Length = 369
Score = 146 (56.5 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 54/182 (29%), Positives = 85/182 (46%)
Query: 7 PKNI-LITGAAGFIASHVCNRLIGN-YPEYKIVVLDKLDYCSNLKNL--NP-SRLSPNFK 61
P+ + LITG G S++ L+ Y + IV +++L NP + N K
Sbjct: 19 PRKVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPHAHTEGNMK 78
Query: 62 FIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEACK 120
GD+ + + I+ K I + AQ+HV SF + E+T + + GT LL+A K
Sbjct: 79 LHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDGLGTLRLLDATK 137
Query: 121 ITGQIK--RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY 178
G I +F ST E+YG+ E + E + P +PY A K A +V+ + +Y
Sbjct: 138 TCGLINTVKFYQASTSELYGKVQE---IPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY 194
Query: 179 GL 180
L
Sbjct: 195 NL 196
Score = 38 (18.4 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 296 QKLKQLGWYERVTWEEGLQKTM 317
Q +LGW +V+++E L K M
Sbjct: 335 QAKNKLGWTPKVSFDE-LVKEM 355
>UNIPROTKB|Q5IFP1 [details] [associations]
symbol:HSD3B "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase" species:9615 "Canis lupus familiaris" [GO:0006694
"steroid biosynthetic process" evidence=IEA] [GO:0031966
"mitochondrial membrane" evidence=IEA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] [GO:0004769 "steroid
delta-isomerase activity" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070
OrthoDB:EOG4K3KWG GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0031966 GO:GO:0006694
CTD:3284 EMBL:AY739720 RefSeq:NP_001010954.1 UniGene:Cfa.13172
ProteinModelPortal:Q5IFP1 STRING:Q5IFP1 GeneID:483146
KEGG:cfa:483146 InParanoid:Q5IFP1 NextBio:20857590 Uniprot:Q5IFP1
Length = 373
Score = 131 (51.2 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 59/234 (25%), Positives = 96/234 (41%)
Query: 11 LITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASA 70
L+TGA GF+ + + L +I LDK L+ + + ++GD+
Sbjct: 7 LVTGAGGFLGQRIVHLLAEEKELQEIRALDKAFRPELLEEFSKLQSKTKLTMVEGDILDE 66
Query: 71 DLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEACKITGQIKRFI 129
+ + ++H A+ V N E N N+ GT +LLEAC + FI
Sbjct: 67 QCLK--RACQGTSVVIHTASVIDVMNVIHR--ETIMNVNLKGTQLLLEACA-QASVPIFI 121
Query: 130 HVSTDEVYGETDEDAVVGN-HEASQLLPT--NPYSATKAGAEMLVMAYG----RSYG-LP 181
+ ST EV G ++ N HE L T PY +K AE V+A ++ G L
Sbjct: 122 YTSTIEVAGPNSYRDIIQNAHEEEHLESTWSAPYPYSKKLAEKAVLAANGWALKNGGTLH 181
Query: 182 VITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEA 235
R +YG + +I A++ + H ++ + +Y +VA A
Sbjct: 182 TCALRPMYIYGEGSI---FLYNYIYKALRNNGILTHHSKFSIVNPVYVGNVAWA 232
Score = 54 (24.1 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 299 KQLGWYERVTWEEGLQKTMKW 319
+ LG+ +WEE QKT +W
Sbjct: 336 RDLGYKPLFSWEEAKQKTTEW 356
>UNIPROTKB|F1PED8 [details] [associations]
symbol:HSD3B2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
OMA:MAGWSCL GO:GO:0006694 GeneTree:ENSGT00550000074557
EMBL:AAEX03011027 Ensembl:ENSCAFT00000015969 Uniprot:F1PED8
Length = 377
Score = 131 (51.2 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 59/234 (25%), Positives = 96/234 (41%)
Query: 11 LITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASA 70
L+TGA GF+ + + L +I LDK L+ + + ++GD+
Sbjct: 11 LVTGAGGFLGQRIVHLLAEEKELQEIRALDKAFRPELLEEFSKLQSKTKLTMVEGDILDE 70
Query: 71 DLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEACKITGQIKRFI 129
+ + ++H A+ V N E N N+ GT +LLEAC + FI
Sbjct: 71 QCLK--RACQGTSVVIHTASVIDVMNVIHR--ETIMNVNLKGTQLLLEACA-QASVPIFI 125
Query: 130 HVSTDEVYGETDEDAVVGN-HEASQLLPT--NPYSATKAGAEMLVMAYG----RSYG-LP 181
+ ST EV G ++ N HE L T PY +K AE V+A ++ G L
Sbjct: 126 YTSTIEVAGPNSYRDIIQNAHEEEHLESTWSAPYPYSKKLAEKAVLAANGWALKNGGTLH 185
Query: 182 VITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEA 235
R +YG + +I A++ + H ++ + +Y +VA A
Sbjct: 186 TCALRPMYIYGEGSI---FLYNYIYKALRNNGILTHHSKFSIVNPVYVGNVAWA 236
Score = 54 (24.1 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 299 KQLGWYERVTWEEGLQKTMKW 319
+ LG+ +WEE QKT +W
Sbjct: 340 RDLGYKPLFSWEEAKQKTTEW 360
>UNIPROTKB|P71790 [details] [associations]
symbol:gmdA "GDP-D-mannose dehydratase gmdA (GDP-mannose
4,6 dehydratase) (GMD)" species:83332 "Mycobacterium tuberculosis
H37Rv" [GO:0005886 "plasma membrane" evidence=IDA] [GO:0071456
"cellular response to hypoxia" evidence=IEP] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005886
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842576 GO:GO:0071456 GO:GO:0005622
GO:GO:0019673 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 OMA:DAIRDWG HSSP:P32054 EMBL:CP003248
PIR:B70714 RefSeq:NP_216027.1 RefSeq:YP_006514898.1
ProteinModelPortal:P71790 SMR:P71790 PRIDE:P71790
EnsemblBacteria:EBMYCT00000003919 GeneID:13320108 GeneID:886529
KEGG:mtu:Rv1511 KEGG:mtv:RVBD_1511 PATRIC:18151910
TubercuList:Rv1511 ProtClustDB:CLSK791213 Uniprot:P71790
Length = 340
Score = 139 (54.0 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 72/314 (22%), Positives = 123/314 (39%)
Query: 8 KNILITGAAGFIASHVCNRLIGN-YPEYKIVVLDKLDYCSNLKNLNPSRLSPNFK-FIK- 64
K LITG G S++ L+ Y + ++ S + +L P + F+
Sbjct: 2 KRALITGITGQDGSYLAELLLAKGYEVHGLIRRASTFNTSRIDHLYVDPHQPGARLFLHY 61
Query: 65 GDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQ 124
GD+ + +L T + D + + AAQ+HV SF G+ LLEA +++
Sbjct: 62 GDLIDGTRLVTLLSTIEPDEVYNLAAQSHVRVSFDEPVHTGDTTGMGSMRLLEAVRLSRV 121
Query: 125 IKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 184
RF S+ E++G + +E + P +PY A K + Y +YGL +
Sbjct: 122 HCRFYQASSSEMFGASPPP----QNELTPFYPRSPYGAAKVYSYWATRNYREAYGLFAVN 177
Query: 185 TRGNNVYGPNQ---FPEKLIPKFILLAMKGKPLPIH-GDGSNVRSYLYCEDVAEAFDTIL 240
N P + F + I + + G ++ G+ VR + Y + E +L
Sbjct: 178 GILFNHESPRRGETFVTRKITRAVARIKAGIQSEVYMGNLDAVRDWGYAPEYVEGMWRML 237
Query: 241 HKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVEN--RPFNDQRYFLDVQKL 298
E + + T + V + A + L+ +KF + RP D K
Sbjct: 238 QTDEPDD-FVLATGRGFTVREFARAAFEHAGLDWQQYVKFDQRYLRPTEVDSLIGDATKA 296
Query: 299 KQL-GWYERVTWEE 311
+L GW V +E
Sbjct: 297 AELLGWRASVHTDE 310
>UNIPROTKB|Q9H2F3 [details] [associations]
symbol:HSD3B7 "3 beta-hydroxysteroid dehydrogenase type 7"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0047016 "cholest-5-ene-3-beta,7-alpha-diol 3-beta-dehydrogenase
activity" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=NAS] [GO:0006699 "bile acid
biosynthetic process" evidence=TAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0005789 "endoplasmic
reticulum membrane" evidence=TAS] [GO:0008206 "bile acid metabolic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] Reactome:REACT_111217 InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 HOVERGEN:HBG000014
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789
EMBL:AF277719 EMBL:AK057436 EMBL:AK290950 EMBL:AK292068
EMBL:AC135048 EMBL:CH471192 EMBL:BC004929 IPI:IPI00065225
IPI:IPI00106783 RefSeq:NP_001136249.1 RefSeq:NP_001136250.1
RefSeq:NP_079469.2 UniGene:Hs.460618 ProteinModelPortal:Q9H2F3
SMR:Q9H2F3 IntAct:Q9H2F3 STRING:Q9H2F3 PhosphoSite:Q9H2F3
DMDM:47605550 PaxDb:Q9H2F3 PRIDE:Q9H2F3 DNASU:80270
Ensembl:ENST00000262520 Ensembl:ENST00000297679
Ensembl:ENST00000353250 GeneID:80270 KEGG:hsa:80270 UCSC:uc002eaf.2
CTD:80270 GeneCards:GC16P030997 H-InvDB:HIX0038797 HGNC:HGNC:18324
HPA:HPA050521 MIM:607764 MIM:607765 neXtProt:NX_Q9H2F3
Orphanet:79301 PharmGKB:PA134940289 InParanoid:Q9H2F3 KO:K12408
OMA:PCGLRLV OrthoDB:EOG4N5VX7 PhylomeDB:Q9H2F3 BindingDB:Q9H2F3
ChEMBL:CHEMBL3600 GenomeRNAi:80270 NextBio:70733
ArrayExpress:Q9H2F3 Bgee:Q9H2F3 CleanEx:HS_HSD3B7
Genevestigator:Q9H2F3 GermOnline:ENSG00000099377 GO:GO:0047016
GO:GO:0006699 GO:GO:0001558 Uniprot:Q9H2F3
Length = 369
Score = 145 (56.1 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 61/196 (31%), Positives = 93/196 (47%)
Query: 11 LITGAAGFIASHVCNRLIGNYPEY-KIVVLDKL--DYCSNLKNLNPSRLSPNFKFIKGDV 67
L+TG GF+ HV L+ P ++ V D+ + LK P R++ I+GDV
Sbjct: 13 LVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKT-GPVRVTA----IQGDV 67
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKN--NIYGTHVLLEACKITGQI 125
A V + + ++H A V FG + T + N+ GT ++EAC TG
Sbjct: 68 TQAHEVAAAVAGAHV--VIHTAGLVDV---FGRASPKTIHEVNVQGTRNVIEACVQTGT- 121
Query: 126 KRF-IHVSTDEVYGETDEDAVV--GNHEAS-QLLPTNPYSATKAGAEMLVM-AYGRSY-- 178
RF ++ S+ EV G + GN + + + +PY +KA AE LV+ A GR
Sbjct: 122 -RFLVYTSSMEVVGPNTKGHPFYRGNEDTPYEAVHRHPYPCSKALAEWLVLEANGRKVRG 180
Query: 179 GLPVITT--RGNNVYG 192
GLP++T R +YG
Sbjct: 181 GLPLVTCALRPTGIYG 196
Score = 37 (18.1 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 5/21 (23%), Positives = 11/21 (52%)
Query: 299 KQLGWYERVTWEEGLQKTMKW 319
+ G+ +WE+ +T+ W
Sbjct: 340 RHFGYEPLFSWEDSRTRTILW 360
>UNIPROTKB|E2QS16 [details] [associations]
symbol:HSD3B7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 GeneTree:ENSGT00550000074557 CTD:80270 KO:K12408
OMA:PCGLRLV EMBL:AAEX03004381 RefSeq:XP_547037.1
Ensembl:ENSCAFT00000026560 GeneID:489917 KEGG:cfa:489917
NextBio:20863025 Uniprot:E2QS16
Length = 369
Score = 141 (54.7 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 60/196 (30%), Positives = 91/196 (46%)
Query: 11 LITGAAGFIASHVCNRLIGNYP---EYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
L+TG GF+ HV L+ P E ++ L + LK P +++ I+GDV
Sbjct: 13 LVTGGCGFLGEHVVRMLLQREPRLLELRVFDLHLGAWLEELKT-GPVQVTA----IQGDV 67
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFT--KNNIYGTHVLLEACKITGQI 125
A V + + ++H A V FG + T + N+ GT ++EAC TG
Sbjct: 68 TQAHEVAAAVAGAHV--VIHTAGLVDV---FGRASPETIYEVNVQGTKNVIEACVQTGT- 121
Query: 126 KRF-IHVSTDEVYGET--DEDAVVGNHEAS-QLLPTNPYSATKAGAEMLVM-AYGRSY-- 178
RF ++ S+ EV G GN + + + +PY +KA AE LV+ A GR
Sbjct: 122 -RFLVYTSSMEVVGPNIKGHHFYRGNEDTPYEAVHRHPYPCSKAQAERLVLEANGRKVHG 180
Query: 179 GLPVITT--RGNNVYG 192
GLP++T R +YG
Sbjct: 181 GLPLVTCALRPTGIYG 196
Score = 41 (19.5 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 5/21 (23%), Positives = 12/21 (57%)
Query: 299 KQLGWYERVTWEEGLQKTMKW 319
+ G+ +WE+ +T++W
Sbjct: 340 RHFGYEPLFSWEDSRTRTIRW 360
>RGD|1592771 [details] [associations]
symbol:Hsd3b "3 beta-hydroxysteroid
dehydrogenase/delta-5-delta-4 isomerase type II" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0004769 "steroid delta-isomerase activity"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 RGD:1592771 GO:GO:0016021 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG
GO:GO:0003854 GO:GO:0000166 GO:GO:0004769 Gene3D:3.40.50.720
GO:GO:0005789 GO:GO:0031966 GO:GO:0006694 UniGene:Rn.128814
GermOnline:ENSRNOG00000019454 EMBL:M38179 EMBL:S63167
IPI:IPI00554001 PIR:A40378 PIR:B39051 RefSeq:NP_001036084.1
ProteinModelPortal:P22072 STRING:P22072 PhosphoSite:P22072
GeneID:682974 KEGG:rno:682974 UCSC:RGD:1592771 CTD:111785
InParanoid:P22072 BindingDB:P22072 ChEMBL:CHEMBL4821 NextBio:724140
ArrayExpress:P22072 Genevestigator:P22072 Uniprot:P22072
Length = 373
Score = 124 (48.7 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 60/235 (25%), Positives = 96/235 (40%)
Query: 11 LITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASA 70
L+TGA GF+ + L+ ++ LDK+ + + + ++GD+ A
Sbjct: 7 LVTGAGGFVGQRIIRMLVQEKELQEVRALDKVFRPETKEEFSKLQTKAKVTMLEGDILDA 66
Query: 71 DLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIH 130
+ + I ++H A+ N+ GT LLEA I + FI+
Sbjct: 67 QYLR--RACQGISVVIHTASVMDFSRVLPRQ-TILDVNLKGTQNLLEA-GIHASVPAFIY 122
Query: 131 VSTDEVYGETDEDAVVGN---HEASQLLPTNPYSATKAGAEMLVMAYGRSY----G-LPV 182
ST +V G + N E + +NPY +K AE V+A S G L
Sbjct: 123 CSTVDVAGPNSYKKTILNGREEEHHESTWSNPYPYSKKMAEKAVLAANGSILKNGGTLHT 182
Query: 183 ITTRGNNVYGPN-QFPEKLIPKFILLAMKGKP-LPIHGDGSNVRSYLYCEDVAEA 235
R +YG QF + + I++A+K K L + G S V +Y +VA A
Sbjct: 183 CALRPMYIYGERGQF----LSRIIIMALKNKGVLNVTGKFSIVNP-VYVGNVAWA 232
Score = 59 (25.8 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 299 KQLGWYERVTWEEGLQKTMKW 319
+ LG+ V+WEE QKT +W
Sbjct: 336 RDLGYEPLVSWEEAKQKTSEW 356
>UNIPROTKB|P22072 [details] [associations]
symbol:Hsd3b "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase type 2" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 RGD:1592771
GO:GO:0016021 eggNOG:COG0451 HOGENOM:HOG000167989
HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG GO:GO:0003854
GO:GO:0000166 GO:GO:0004769 Gene3D:3.40.50.720 GO:GO:0005789
GO:GO:0031966 GO:GO:0006694 UniGene:Rn.128814
GermOnline:ENSRNOG00000019454 EMBL:M38179 EMBL:S63167
IPI:IPI00554001 PIR:A40378 PIR:B39051 RefSeq:NP_001036084.1
ProteinModelPortal:P22072 STRING:P22072 PhosphoSite:P22072
GeneID:682974 KEGG:rno:682974 UCSC:RGD:1592771 CTD:111785
InParanoid:P22072 BindingDB:P22072 ChEMBL:CHEMBL4821 NextBio:724140
ArrayExpress:P22072 Genevestigator:P22072 Uniprot:P22072
Length = 373
Score = 124 (48.7 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 60/235 (25%), Positives = 96/235 (40%)
Query: 11 LITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASA 70
L+TGA GF+ + L+ ++ LDK+ + + + ++GD+ A
Sbjct: 7 LVTGAGGFVGQRIIRMLVQEKELQEVRALDKVFRPETKEEFSKLQTKAKVTMLEGDILDA 66
Query: 71 DLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIH 130
+ + I ++H A+ N+ GT LLEA I + FI+
Sbjct: 67 QYLR--RACQGISVVIHTASVMDFSRVLPRQ-TILDVNLKGTQNLLEA-GIHASVPAFIY 122
Query: 131 VSTDEVYGETDEDAVVGN---HEASQLLPTNPYSATKAGAEMLVMAYGRSY----G-LPV 182
ST +V G + N E + +NPY +K AE V+A S G L
Sbjct: 123 CSTVDVAGPNSYKKTILNGREEEHHESTWSNPYPYSKKMAEKAVLAANGSILKNGGTLHT 182
Query: 183 ITTRGNNVYGPN-QFPEKLIPKFILLAMKGKP-LPIHGDGSNVRSYLYCEDVAEA 235
R +YG QF + + I++A+K K L + G S V +Y +VA A
Sbjct: 183 CALRPMYIYGERGQF----LSRIIIMALKNKGVLNVTGKFSIVNP-VYVGNVAWA 232
Score = 59 (25.8 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 299 KQLGWYERVTWEEGLQKTMKW 319
+ LG+ V+WEE QKT +W
Sbjct: 336 RDLGYEPLVSWEEAKQKTSEW 356
>UNIPROTKB|Q4KC82 [details] [associations]
symbol:arnA "Bifunctional polymyxin resistance protein
ArnA" species:220664 "Pseudomonas protegens Pf-5" [GO:0009245
"lipid A biosynthetic process" evidence=ISS] [GO:0016742
"hydroxymethyl-, formyl- and related transferase activity"
evidence=ISS] [GO:0016831 "carboxy-lyase activity" evidence=ISS]
[GO:0046398 "UDP-glucuronate metabolic process" evidence=ISS]
[GO:0046677 "response to antibiotic" evidence=ISS]
UniPathway:UPA00032 HAMAP:MF_01166 InterPro:IPR001509
InterPro:IPR002376 InterPro:IPR005793 InterPro:IPR011034
InterPro:IPR021168 Pfam:PF00551 Pfam:PF01370 Pfam:PF02911
PIRSF:PIRSF036506 UniPathway:UPA00030 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
SUPFAM:SSF50486 GO:GO:0016491 GO:GO:0046677 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0009245 GO:GO:0016742 GO:GO:0008168
Gene3D:3.10.25.10 Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0009103
HOGENOM:HOG000247761 KO:K10011 OMA:VRYCVKY ProtClustDB:PRK08125
RefSeq:YP_260151.1 ProteinModelPortal:Q4KC82 SMR:Q4KC82
STRING:Q4KC82 GeneID:3475938 KEGG:pfl:PFL_3045 PATRIC:19875401
BioCyc:PFLU220664:GIX8-3059-MONOMER GO:GO:0016831 GO:GO:0046398
Uniprot:Q4KC82
Length = 668
Score = 142 (55.0 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 70/286 (24%), Positives = 123/286 (43%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLD-KLDYCSNLKNLNPSRLSPNFKFIKGDVA 68
+LI G GFI +H+ RL+ + +Y + LD D L++ PNF F++GD++
Sbjct: 321 VLILGVNGFIGNHLSERLLRD-DKYDVYGLDIGSDAIERLRS------HPNFHFVEGDIS 373
Query: 69 -SADLVHFILLTEKIDTIMHFAA-QTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIK 126
++ + + + +K D ++ A T ++ + N + + L+ C K
Sbjct: 374 IHSEWIEYHI--KKCDVVLPLVAIATPIEYT-RNPLRVFELDFEENLKLVRYC--VKYNK 428
Query: 127 RFIHVSTDEVYGETDEDAVVGNHEASQLL--PTNP----YSATKAGAEMLVMAYGRSYGL 180
R I ST EVYG + + + S L+ P N YS +K + ++ AYG GL
Sbjct: 429 RVIFPSTSEVYGMCQDKNF--DEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGAK-GL 485
Query: 181 PVITTRGNNVYGPNQF--------PEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDV 232
R N GP + I + IL ++G P+ + G R + D
Sbjct: 486 NFTLFRPFNWMGPRLDRLDSARIGSSRAITQLILNLVEGTPIRLFDGGEQKRCFTDIADG 545
Query: 233 AEAFDTIL-HKGEV--GHVYNIGTK-KERRVIDVATDICKLFSLNP 274
EA I+ ++ + G + NIG E + + ++ + F +P
Sbjct: 546 IEALARIVDNENDCCNGQIINIGNPDNEASIRQLGEELLRQFEAHP 591
>UNIPROTKB|I3L900 [details] [associations]
symbol:SDR42E1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00550000074557 OMA:FYNFQPF Ensembl:ENSSSCT00000025649
Uniprot:I3L900
Length = 390
Score = 138 (53.6 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 60/254 (23%), Positives = 111/254 (43%)
Query: 6 TPKN-ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPN-FKFI 63
+PK +LITG G+ + L N ++++ D +P+ P KFI
Sbjct: 6 SPKETVLITGGGGYFGFRLGCAL--NQKGLRVILFDVS---------SPAHTIPEGVKFI 54
Query: 64 KGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITG 123
+GD+ V + + H A+ N N+ GT +L+AC+ G
Sbjct: 55 RGDIRLLADVERAFEDADVTCVFHIASYGMSGREQLNRSRIEDVNVGGTDNVLQACRSRG 114
Query: 124 QIKRFIHVST-DEVYGETDEDAVVGNHEASQLLPTN--P--YSATKAGAEMLVM-AYGRS 177
+ R ++ ST + ++G + E+ LP + P YS TK+ AE V+ A G++
Sbjct: 115 -VPRLVYTSTFNVIFGG---QVIRNGDESLPYLPLHLHPDHYSRTKSVAEKKVLEANGKA 170
Query: 178 YG-LPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAF 236
L R +YGP + ++ +P+ + KG ++GD ++ +++ +++ +A
Sbjct: 171 LAXLRTCALRPAGIYGPGE--QRHLPRIVSYLEKGLFRFVYGDPKSLVEFVHVDNLVQAH 228
Query: 237 DTILH--KGEVGHV 248
K + GHV
Sbjct: 229 ILASEALKADKGHV 242
>DICTYBASE|DDB_G0270184 [details] [associations]
symbol:ger "GDP-keto-6-deoxymannose 3,5-
epimerase/4-reductase" species:44689 "Dictyostelium discoideum"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 dictyBase:DDB_G0270184
EMBL:AAFI02000005 GenomeReviews:CM000150_GR eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0016853
KO:K02377 GO:GO:0050577 GO:GO:0042351 OMA:IHCAGRV
RefSeq:XP_646604.1 HSSP:P32055 ProteinModelPortal:Q55C77
STRING:Q55C77 EnsemblProtists:DDB0305155 GeneID:8617576
KEGG:ddi:DDB_G0270184 InParanoid:Q55C77 ProtClustDB:CLSZ2431446
Uniprot:Q55C77
Length = 320
Score = 136 (52.9 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 69/267 (25%), Positives = 116/267 (43%)
Query: 80 EKIDT--IMHFAAQTHVDNSFGN---SFEFTKNNIYGTHVLLEACKITGQIKRFIHVST- 133
EKI ++H AA+ V F N EF + NI +L CK +K +ST
Sbjct: 58 EKIKPTHVIHLAAR--VGGLFSNMKYKVEFFRENIDINDNVLACCKEFNVVKCVSCLSTC 115
Query: 134 ---DEVYGETDEDAVVGNHEASQLLPTNP-YSATKAGAEMLVMAYGRSYGLPVITTRGNN 189
D+ DE + H P+N Y+ K ++L AY YG + N
Sbjct: 116 IFPDKTTYPIDETMI---HNGPPH-PSNEGYAYAKRMIDVLNRAYNEEYGCKFTSVIPTN 171
Query: 190 VYGPNQ----FPEKLIPKFI---LLAMKG-KPLPIHGDGSNVRSYLYCEDVAEAFDTILH 241
+YGP+ +IP I LAMK + L I G G +R ++Y D+A+ F L+
Sbjct: 172 IYGPHDNYHLTDGHVIPGLIHKTYLAMKNNQDLTIMGTGKPLRQFIYSYDLAKYFVWTLN 231
Query: 242 KGEVGH--VYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLK 299
E + ++G + E I +A D+ +L + + + K + + D +Y LK
Sbjct: 232 NYEEMSPLILSVGEEDE---ISIA-DVARLITEAMEFKGKLIFDTSKADGQYKKTASNLK 287
Query: 300 QLGWYERVTW---EEGLQKTMKWYISN 323
+T+ ++ ++++ +W+I N
Sbjct: 288 LKSLVPDLTFTPIQQAIKESCQWFIDN 314
>UNIPROTKB|I3L2H6 [details] [associations]
symbol:HSD3B7 "3 beta-hydroxysteroid dehydrogenase type 7"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 EMBL:AC135048 HGNC:HGNC:18324 GO:GO:0047016
GO:GO:0001558 Ensembl:ENST00000574447 Bgee:I3L2H6 Uniprot:I3L2H6
Length = 176
Score = 124 (48.7 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 54/176 (30%), Positives = 83/176 (47%)
Query: 11 LITGAAGFIASHVCNRLIGNYPEY-KIVVLDKL--DYCSNLKNLNPSRLSPNFKFIKGDV 67
L+TG GF+ HV L+ P ++ V D+ + LK P R++ I+GDV
Sbjct: 13 LVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKT-GPVRVTA----IQGDV 67
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKN--NIYGTHVLLEACKITGQI 125
A V + + ++H A V FG + T + N+ GT ++EAC TG
Sbjct: 68 TQAHEVAAAVAGAHV--VIHTAGLVDV---FGRASPKTIHEVNVQGTRNVIEACVQTGT- 121
Query: 126 KRF-IHVSTDEVYGETDEDAVV--GNHEAS-QLLPTNPYSATKAGAEMLVM-AYGR 176
RF ++ S+ EV G + GN + + + +PY +KA AE LV+ A GR
Sbjct: 122 -RFLVYTSSMEVVGPNTKGHPFYRGNEDTPYEAVHRHPYPCSKALAEWLVLEANGR 176
>UNIPROTKB|F1P299 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0007219 "Notch signaling
pathway" evidence=ISS] [GO:0042351 "'de novo' GDP-L-fucose
biosynthetic process" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0019673 "GDP-mannose
metabolic process" evidence=ISS] [GO:0070401 "NADP+ binding"
evidence=ISS] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
EMBL:AADN02036511 EMBL:AADN02036512 EMBL:AADN02036513
EMBL:AADN02036514 EMBL:AADN02036515 EMBL:AADN02036516
EMBL:AADN02036517 EMBL:AADN02036518 IPI:IPI00578850
Ensembl:ENSGALT00000020945 Uniprot:F1P299
Length = 358
Score = 139 (54.0 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 51/180 (28%), Positives = 84/180 (46%)
Query: 8 KNILITGAAGFIASHVCNRLIGN-YPEYKIVVLDKLDYCSNLKNL---NPSRLSPNFKFI 63
K LITG G S++ L+ Y + IV +++L + + + N K
Sbjct: 10 KVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNSQAHIEGNMKLH 69
Query: 64 KGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEACKIT 122
GD+ + + I+ K + I + AQ+HV SF + E+T + + GT LL+A K
Sbjct: 70 YGDLTDSTCLVKIINEVKPNEIYNLGAQSHVKISFDLA-EYTADVDGVGTLRLLDAIKTC 128
Query: 123 GQIK--RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 180
G I +F ST E++G+ E + E + P +PY A K A +V+ + +Y L
Sbjct: 129 GLINSVKFYQASTSELFGKVQE---IPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNL 185
Score = 40 (19.1 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 294 DVQKLKQ-LGWYERVTWEE 311
D K +Q L W RVT++E
Sbjct: 321 DCTKARQKLNWKPRVTFDE 339
>MGI|MGI:109598 [details] [associations]
symbol:Hsd3b6 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 6" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=ISO] [GO:0004769 "steroid delta-isomerase activity"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=ISO] [GO:0005758
"mitochondrial intermembrane space" evidence=ISO] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0006700 "C21-steroid
hormone biosynthetic process" evidence=ISO] [GO:0006702 "androgen
biosynthetic process" evidence=ISO] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016616 "oxidoreductase activity,
acting on the CH-OH group of donors, NAD or NADP as acceptor"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0034757 "negative regulation of iron ion transport"
evidence=ISO] [GO:0055114 "oxidation-reduction process"
evidence=ISO] InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 MGI:MGI:109598 GO:GO:0016021
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG
BRENDA:1.1.1.145 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0031966 GO:GO:0006694
BRENDA:5.3.3.1 EMBL:AL606755 GeneTree:ENSGT00550000074557 CTD:15497
EMBL:AF031170 EMBL:AK142267 EMBL:CH466620 IPI:IPI00420666
RefSeq:NP_038849.2 UniGene:Mm.14435 ProteinModelPortal:O35469
SMR:O35469 STRING:O35469 PRIDE:O35469 Ensembl:ENSMUST00000029463
Ensembl:ENSMUST00000170847 GeneID:15497 KEGG:mmu:15497
InParanoid:Q3UQN7 OMA:FIHISST NextBio:288386 Bgee:O35469
Genevestigator:O35469 GermOnline:ENSMUSG00000027869 Uniprot:O35469
Length = 373
Score = 122 (48.0 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 59/212 (27%), Positives = 87/212 (41%)
Query: 11 LITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKF--IKGDVA 68
L+TGA GF+ + L+ +I VLDK + L N K ++GD+
Sbjct: 7 LVTGAGGFLGQRIVQLLMQEKDLEEIRVLDKFFRPETREQF--FNLDTNIKVTVLEGDIL 64
Query: 69 SADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRF 128
D + + I ++H AA V N+ GT LLEAC I + F
Sbjct: 65 --DTQYLRKACQGISVVIHTAAVIDVTGVIPRQ-TILDVNLKGTQNLLEAC-IQASVPAF 120
Query: 129 IHVSTDEVYGETDEDAVV--GNHEAS-QLLPTNPYSATKAGAEMLVMAYGRSY----G-L 180
I S+ +V G ++ GN E + + ++PY +K AE V+A S G L
Sbjct: 121 IFSSSVDVAGPNSYKEIILNGNEEEHHESIWSDPYPYSKKMAEKAVLAANGSMLKIGGTL 180
Query: 181 PVITTRGNNVYGPNQFPEKLIPKFILLAMKGK 212
R +YG P I I+ A+K K
Sbjct: 181 HTCALRPMYIYGERS-P--FISNTIITALKNK 209
Score = 59 (25.8 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 299 KQLGWYERVTWEEGLQKTMKW 319
+ LG+ V+WEE QKT +W
Sbjct: 336 RDLGYEPLVSWEEAKQKTSEW 356
>RGD|2838 [details] [associations]
symbol:Hsd3b5 "hydroxy-delta-5-steroid dehydrogenase, 3 beta- and
steroid delta-isomerase 5" species:10116 "Rattus norvegicus"
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IDA] [GO:0005496 "steroid binding" evidence=IDA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA;IDA;TAS] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016229 "steroid dehydrogenase activity"
evidence=TAS] [GO:0031966 "mitochondrial membrane" evidence=IEA]
[GO:0042448 "progesterone metabolic process" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA]
[GO:0050810 "regulation of steroid biosynthetic process"
evidence=IDA] [GO:0051287 "NAD binding" evidence=IDA]
InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 RGD:2838 GO:GO:0043231 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070
OrthoDB:EOG4K3KWG GO:GO:0003854 Gene3D:3.40.50.720 GO:GO:0005789
GO:GO:0031966 GO:GO:0006694 GO:GO:0051287 GO:GO:0005496
GeneTree:ENSGT00550000074557 CTD:15496 EMBL:M67465 EMBL:BC092571
IPI:IPI00231782 PIR:A37404 RefSeq:NP_036716.1 RefSeq:XP_003749408.1
UniGene:Rn.34902 ProteinModelPortal:P27364 STRING:P27364
PhosphoSite:P27364 PRIDE:P27364 Ensembl:ENSRNOT00000026290
GeneID:100911116 GeneID:24470 KEGG:rno:100911116 KEGG:rno:24470
UCSC:RGD:2838 InParanoid:P27364 BindingDB:P27364 ChEMBL:CHEMBL4490
NextBio:603409 Genevestigator:P27364 GermOnline:ENSRNOG00000019417
GO:GO:0042448 GO:GO:0050810 Uniprot:P27364
Length = 373
Score = 122 (48.0 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 39/166 (23%), Positives = 72/166 (43%)
Query: 11 LITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASA 70
L+TGA GF+ + L+ ++ VL + + + L+ + ++GD+ A
Sbjct: 7 LVTGAGGFLGQRIVQMLVQEKELQEVRVLYRTFSPKHKEELSKLQTKAKVTVLRGDIVDA 66
Query: 71 DLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIH 130
+ + + I+H AA + N+ GT +LL+AC + + FI+
Sbjct: 67 QFLR--RACQGMSVIIHTAAALDIAGFLPRQ-TILDVNVKGTQLLLDAC-VEASVPAFIY 122
Query: 131 VSTDEVYGETD-EDAVVGNHEASQLLPT--NPYSATKAGAEMLVMA 173
S+ V G ++ ++ + E T NPY +K AE V+A
Sbjct: 123 SSSTGVAGPNSYKETILNDREEEHRESTWSNPYPYSKRMAEKAVLA 168
Score = 59 (25.8 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 299 KQLGWYERVTWEEGLQKTMKW 319
+ LG+ V+WEE QKT +W
Sbjct: 336 RDLGYEPLVSWEEAKQKTSEW 356
>UNIPROTKB|P14060 [details] [associations]
symbol:HSD3B1 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase type 1" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0006702 "androgen biosynthetic process"
evidence=TAS] [GO:0006703 "estrogen biosynthetic process"
evidence=TAS] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=ISS] [GO:0006694 "steroid
biosynthetic process" evidence=ISS] [GO:0030868 "smooth endoplasmic
reticulum membrane" evidence=ISS] [GO:0005758 "mitochondrial
intermembrane space" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0004769 "steroid delta-isomerase
activity" evidence=ISS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=TAS] [GO:0006704 "glucocorticoid biosynthetic
process" evidence=TAS] [GO:0006705 "mineralocorticoid biosynthetic
process" evidence=TAS] [GO:0008202 "steroid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] Reactome:REACT_111217 InterPro:IPR002225 Pfam:PF01073
UniPathway:UPA00062 InterPro:IPR016040 GO:GO:0016021 EMBL:M27137
EMBL:M28392 EMBL:M28162 EMBL:M28391 EMBL:X53321 EMBL:M35493
EMBL:M63397 EMBL:M63395 EMBL:M63396 EMBL:M38180 EMBL:X55997
EMBL:S45679 EMBL:AK291556 EMBL:BC031999 IPI:IPI00843838 PIR:A36551
RefSeq:NP_000853.1 UniGene:Hs.364941 ProteinModelPortal:P14060
SMR:P14060 STRING:P14060 PhosphoSite:P14060 DMDM:112767
PRIDE:P14060 DNASU:3283 Ensembl:ENST00000369413
Ensembl:ENST00000528909 GeneID:3283 KEGG:hsa:3283 UCSC:uc001ehv.1
CTD:3283 GeneCards:GC01P120049 H-InvDB:HIX0028579 HGNC:HGNC:5217
MIM:109715 neXtProt:NX_P14060 PharmGKB:PA29486 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 InParanoid:P14060 KO:K00070
OrthoDB:EOG4K3KWG PhylomeDB:P14060 BioCyc:MetaCyc:HS08829-MONOMER
BRENDA:1.1.1.145 Reactome:REACT_15493 SABIO-RK:P14060
BindingDB:P14060 ChEMBL:CHEMBL1958 DrugBank:DB00157
DrugBank:DB01108 GenomeRNAi:3283 NextBio:13031 ArrayExpress:P14060
Bgee:P14060 CleanEx:HS_HSD3B1 Genevestigator:P14060
GermOnline:ENSG00000203857 GO:GO:0005743 GO:GO:0005758
GO:GO:0030868 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
GO:GO:0006702 GO:GO:0006703 GO:GO:0006704 GO:GO:0006705
GO:GO:0044281 Gene3D:3.40.50.720 Uniprot:P14060
Length = 373
Score = 130 (50.8 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 52/170 (30%), Positives = 78/170 (45%)
Query: 11 LITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKF--IKGDVA 68
L+TGA GF+ + L+ +I VLDK + L+ S+L K ++GD+
Sbjct: 7 LVTGAGGFLGQRIIRLLVKEKELKEIRVLDKA-FGPELRE-EFSKLQNKTKLTVLEGDIL 64
Query: 69 SADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSF-EFTKN-NIYGTHVLLEACKITGQIK 126
+ + + I+H A V FG + E N N+ GT +LLEAC + +
Sbjct: 65 DEPFLK--RACQDVSVIIHTACIIDV---FGVTHRESIMNVNVKGTQLLLEAC-VQASVP 118
Query: 127 RFIHVSTDEVYGETDEDAVVGN-HEASQLLPT--NPYSATKAGAEMLVMA 173
FI+ S+ EV G ++ N HE L T PY +K AE V+A
Sbjct: 119 VFIYTSSIEVAGPNSYKEIIQNGHEEEPLENTWPAPYPHSKKLAEKAVLA 168
Score = 50 (22.7 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 299 KQLGWYERVTWEEGLQKTMKW 319
+ L + +WEE QKT++W
Sbjct: 336 RDLAYKPLYSWEEAKQKTVEW 356
>UNIPROTKB|Q5TDG2 [details] [associations]
symbol:HSD3B1 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase type 1" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
UniGene:Hs.364941 HGNC:HGNC:5217 HOGENOM:HOG000167989
HOVERGEN:HBG000014 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
OMA:MAGWSCL GO:GO:0006694 GO:GO:0016853 EMBL:AL121995
IPI:IPI00246994 ProteinModelPortal:Q5TDG2 SMR:Q5TDG2 STRING:Q5TDG2
PRIDE:Q5TDG2 Ensembl:ENST00000235547 ArrayExpress:Q5TDG2
Bgee:Q5TDG2 Uniprot:Q5TDG2
Length = 375
Score = 130 (50.8 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 52/170 (30%), Positives = 78/170 (45%)
Query: 11 LITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKF--IKGDVA 68
L+TGA GF+ + L+ +I VLDK + L+ S+L K ++GD+
Sbjct: 9 LVTGAGGFLGQRIIRLLVKEKELKEIRVLDKA-FGPELRE-EFSKLQNKTKLTVLEGDIL 66
Query: 69 SADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSF-EFTKN-NIYGTHVLLEACKITGQIK 126
+ + + I+H A V FG + E N N+ GT +LLEAC + +
Sbjct: 67 DEPFLK--RACQDVSVIIHTACIIDV---FGVTHRESIMNVNVKGTQLLLEAC-VQASVP 120
Query: 127 RFIHVSTDEVYGETDEDAVVGN-HEASQLLPT--NPYSATKAGAEMLVMA 173
FI+ S+ EV G ++ N HE L T PY +K AE V+A
Sbjct: 121 VFIYTSSIEVAGPNSYKEIIQNGHEEEPLENTWPAPYPHSKKLAEKAVLA 170
Score = 50 (22.7 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 299 KQLGWYERVTWEEGLQKTMKW 319
+ L + +WEE QKT++W
Sbjct: 338 RDLAYKPLYSWEEAKQKTVEW 358
>TAIR|locus:2080933 [details] [associations]
symbol:MUR1 "MURUS 1" species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;ISS;IDA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009826 "unidimensional cell growth" evidence=IMP] [GO:0005829
"cytosol" evidence=IDA] [GO:0006007 "glucose catabolic process"
evidence=RCA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IMP] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0005525
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009826 EMBL:AL132980
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 ProtClustDB:PLN02653
EMBL:U81805 EMBL:BT025710 EMBL:AY084574 IPI:IPI00519785 PIR:T45747
RefSeq:NP_190685.2 UniGene:At.23910 PDB:1N7G PDB:1N7H PDBsum:1N7G
PDBsum:1N7H ProteinModelPortal:P93031 SMR:P93031 STRING:P93031
PaxDb:P93031 PRIDE:P93031 EnsemblPlants:AT3G51160.1 GeneID:824280
KEGG:ath:AT3G51160 GeneFarm:4170 TAIR:At3g51160 InParanoid:P93031
OMA:DAIRDWG PhylomeDB:P93031 BioCyc:MetaCyc:AT3G51160-MONOMER
EvolutionaryTrace:P93031 Genevestigator:P93031 GermOnline:AT3G51160
Uniprot:P93031
Length = 373
Score = 136 (52.9 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 81/337 (24%), Positives = 141/337 (41%)
Query: 2 ATVYTPKNI-LITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPN- 59
+TV P+ I LITG G S++ L+G Y++ L + N + +N + P+
Sbjct: 22 STVVEPRKIALITGITGQDGSYLTEFLLGK--GYEVHGLIRRSSNFNTQRINHIYIDPHN 79
Query: 60 -----FKFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIY-GTH 113
K D+ A + + K D + + AAQ+HV SF ++T + + G
Sbjct: 80 VNKALMKLHYADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIP-DYTADVVATGAL 138
Query: 114 VLLEACKI----TGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEM 169
LLEA + +G+ ++ + E++G T E + P +PY+A+K A
Sbjct: 139 RLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPP----QSETTPFHPRSPYAASKCAAHW 194
Query: 170 LVMAYGRSYGL----PVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIH-GDGSNVR 224
+ Y +YGL ++ + G N F + I + + G + G+ R
Sbjct: 195 YTVNYREAYGLFACNGILFNHESPRRGEN-FVTRKITRALGRIKVGLQTKLFLGNLQASR 253
Query: 225 SYLYCEDVAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDIC-KLFSLNPDTQIKFVEN 283
+ + D EA +L + E Y + T+ E ++ D+ LN ++ +
Sbjct: 254 DWGFAGDYVEAMWLMLQQ-EKPDDYVVATE-EGHTVEEFLDVSFGYLGLNWKDYVEIDQR 311
Query: 284 --RPFNDQRYFLDVQKLKQ-LGWYERVTWEEGLQKTM 317
RP D K K+ LGW +V +E+ L K M
Sbjct: 312 YFRPAEVDNLQGDASKAKEVLGWKPQVGFEK-LVKMM 347
>ASPGD|ASPL0000064017 [details] [associations]
symbol:AN7575 species:162425 "Emericella nidulans"
[GO:0016125 "sterol metabolic process" evidence=RCA] [GO:0004769
"steroid delta-isomerase activity" evidence=RCA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 EMBL:AACD01000129 EMBL:BN001304
KO:K07748 RefSeq:XP_680844.1 ProteinModelPortal:Q5AVV5
STRING:Q5AVV5 EnsemblFungi:CADANIAT00000683 GeneID:2869367
KEGG:ani:AN7575.2 OMA:NEDWPLI OrthoDB:EOG4J9R7N Uniprot:Q5AVV5
Length = 410
Score = 123 (48.4 bits), Expect = 9.7e-06, Sum P(3) = 9.7e-06
Identities = 52/201 (25%), Positives = 90/201 (44%)
Query: 46 SNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFT 105
++L+ N +RL P + +GD+ SA+ + + K D ++H A+ D + ++
Sbjct: 71 ADLRTTN-NRL-PGADYYEGDLTSAESMLSVFRKVKPDVVIHTASAMLTDKNL--LYQL- 125
Query: 106 KNNIYGTHVLLEACKIT-----GQIKRFIHVSTDEVYGETDEDAVVGNHEASQL---LPT 157
N+ GT LLE G+ K F++ S+ V +T D + N + + L
Sbjct: 126 --NVEGTKTLLEVAGGARGDWGGKCKAFVYTSSASVIHDTQSDLLNVNEDWPLIRGKLQQ 183
Query: 158 NPYSATKAGAEMLVMAYGRSYGLPVITT--RGNNVYGPNQFPEKLIPKFILLAMKGKPLP 215
YS TKA AE V+ Y R ++T R + +YG +LI K + + P
Sbjct: 184 EYYSDTKAEAEEAVLKYNRKSPSSMLTCALRPSGIYGEKD--GQLIIKMLSHGVNASPTV 241
Query: 216 IH---GDGSNVRSYLYCEDVA 233
G+ +N+ + Y +VA
Sbjct: 242 RKMQLGENNNLFDFTYVGNVA 262
Score = 59 (25.8 bits), Expect = 9.7e-06, Sum P(3) = 9.7e-06
Identities = 9/23 (39%), Positives = 17/23 (73%)
Query: 10 ILITGAAGFIASHVCNRLIGNYP 32
+L+ G GF+ SH+ ++L+ N+P
Sbjct: 13 VLVVGGCGFLGSHIVDQLL-NFP 34
Score = 38 (18.4 bits), Expect = 9.7e-06, Sum P(3) = 9.7e-06
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 290 RYFLDVQKLK-QLGWYERVTWEEGLQKTMKWYISNPDWWGDVSG 332
RY+ K K +LG+ V +EGL + + +++ G+ G
Sbjct: 367 RYY-SCDKAKDRLGYTPIVPLDEGLARAVGYFLERWRLEGEKKG 409
>UNIPROTKB|E1C279 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005811
"lipid particle" evidence=IEA] [GO:0007224 "smoothened signaling
pathway" evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] [GO:0060716 "labyrinthine layer blood vessel
development" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0005783 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
OMA:IQLQPTF GO:GO:0005811 GO:GO:0008203 GO:GO:0007224 KO:K07748
CTD:50814 EMBL:AADN02013506 IPI:IPI00684598 RefSeq:XP_420279.1
ProteinModelPortal:E1C279 Ensembl:ENSGALT00000032336 GeneID:422302
KEGG:gga:422302 NextBio:20824951 Uniprot:E1C279
Length = 346
Score = 125 (49.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 53/197 (26%), Positives = 84/197 (42%)
Query: 38 VLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNS 97
+LDK Y N+ ++ +F GD+ + + + + + + H A+ S
Sbjct: 29 LLDK-GYSVNVFDIQKRFDHDRVQFFLGDLCNKEAL--LPALQDVSVAFHCASPAP---S 82
Query: 98 FGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETD-EDAVVGNHEASQLLP 156
N F K N GT ++EACK G K + S V+ TD ++ A + P
Sbjct: 83 SDNKELFYKVNFMGTKAVIEACKEAGVQKLVLTSSASVVFEGTDIKNGTEDLPYAKK--P 140
Query: 157 TNPYSATKAGAEMLVM-AYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLP 215
+ Y+ TK E V+ A R + ++GP P+ L+P I A GK
Sbjct: 141 IDYYTETKILQEKEVLSANDPDNNFFTTAIRPHGIFGPRD-PQ-LVPILIQAAKSGKMKF 198
Query: 216 IHGDGSNVRSYLYCEDV 232
I GDG N+ + Y E+V
Sbjct: 199 IIGDGKNLVDFTYVENV 215
Score = 53 (23.7 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 1 MATVY--TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLD 40
MAT + T K ++ G +GF+ H+ +L+ Y + V D
Sbjct: 1 MATHFRSTGKKCVVIGGSGFLGQHMVEKLLDK--GYSVNVFD 40
>UNIPROTKB|E2RC02 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070401 "NADP+ binding" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040
Gene3D:3.40.50.720 GO:GO:0005622 GO:GO:0070401 GO:GO:0019673
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
OMA:DAIRDWG EMBL:AAEX03017462 Ensembl:ENSCAFT00000014648
Uniprot:E2RC02
Length = 300
Score = 133 (51.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 42/133 (31%), Positives = 65/133 (48%)
Query: 52 NP-SRLSPNFKFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKN-NI 109
NP + + N K GD+ + + I+ K I + AQ+HV SF + E+T + +
Sbjct: 42 NPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDG 100
Query: 110 YGTHVLLEACKITGQIK--RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 167
GT LL+A K G I +F ST E+YG+ E + E + P +PY A K A
Sbjct: 101 VGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQE---IPQKETTPFYPRSPYGAAKLYA 157
Query: 168 EMLVMAYGRSYGL 180
+V+ + +Y L
Sbjct: 158 YWIVVNFREAYNL 170
>UNIPROTKB|C9JFU6 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005739 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:AC018878 HGNC:HGNC:17729
IPI:IPI00916816 ProteinModelPortal:C9JFU6 SMR:C9JFU6 STRING:C9JFU6
Ensembl:ENST00000444193 ArrayExpress:C9JFU6 Bgee:C9JFU6
Uniprot:C9JFU6
Length = 121
Score = 113 (44.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 35/121 (28%), Positives = 55/121 (45%)
Query: 100 NSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNH--EASQLLPT 157
N + K N GT +L K G R + ST EVYG+ + ++ + + P
Sbjct: 3 NPIKTLKTNTIGTLNMLGLAKRVGA--RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPR 60
Query: 158 NPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE--KLIPKFILLAMKGKPLP 215
Y K AE + AY + G+ V R N +GP +++ FIL A++G+PL
Sbjct: 61 ACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLT 120
Query: 216 I 216
+
Sbjct: 121 V 121
>UNIPROTKB|Q83DM2 [details] [associations]
symbol:CBU_0681 "NAD dependent epimerase/dehydratase
family" species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 RefSeq:NP_819711.1
ProteinModelPortal:Q83DM2 GeneID:1208570 KEGG:cbu:CBU_0681
PATRIC:17930045 HOGENOM:HOG000026895 OMA:VSKISHR
ProtClustDB:CLSK914235 BioCyc:CBUR227377:GJ7S-679-MONOMER
Uniprot:Q83DM2
Length = 301
Score = 118 (46.6 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 56/252 (22%), Positives = 106/252 (42%)
Query: 66 DVASADLVHFILLT-EKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQ 124
D+ + D +L + DT++ AA+ N+ N+ +V+ E +
Sbjct: 47 DLLNPDATEQLLKQLQASDTLVITAAEAPCKNA-----AMLYRNVRMMNVVCEVLQKQA- 100
Query: 125 IKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 184
I++ I++S+D VY ++D+ E S PT+ + EM++ + + +
Sbjct: 101 IQQVIYISSDAVYADSDQPLT----ETSVTAPTSLHGVMHLAREMMLQSVCSENNISLAI 156
Query: 185 TRGNNVYGPNQFPEKLIP-KFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG 243
R + +YG P +F LA + + + G+G R ++Y +DVAE ++ +
Sbjct: 157 LRPSLLYGAEDPHNGYGPNRFRRLADNHESIILFGEGEEQRDHVYIDDVAEIITRVIQRC 216
Query: 244 EVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVE-NRPFNDQRYFLDVQKLKQLG 302
G V NI T + +A + +L + Q + + P N R F K
Sbjct: 217 SRG-VLNIATGQVISFKQLAEKVVQLSNNEVAIQPSPRQGSMPHNGYRPFDITDCQKAFP 275
Query: 303 WYERVTWEEGLQ 314
+ + E+GLQ
Sbjct: 276 DFSYTSIEDGLQ 287
Score = 57 (25.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 6 TPKNILITGAAGFIASHVCNRL 27
TP +++ GA GF+ +C RL
Sbjct: 10 TPSRVVVLGANGFVGRALCQRL 31
>TIGR_CMR|CBU_0681 [details] [associations]
symbol:CBU_0681 "conserved hypothetical protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 RefSeq:NP_819711.1
ProteinModelPortal:Q83DM2 GeneID:1208570 KEGG:cbu:CBU_0681
PATRIC:17930045 HOGENOM:HOG000026895 OMA:VSKISHR
ProtClustDB:CLSK914235 BioCyc:CBUR227377:GJ7S-679-MONOMER
Uniprot:Q83DM2
Length = 301
Score = 118 (46.6 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 56/252 (22%), Positives = 106/252 (42%)
Query: 66 DVASADLVHFILLT-EKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQ 124
D+ + D +L + DT++ AA+ N+ N+ +V+ E +
Sbjct: 47 DLLNPDATEQLLKQLQASDTLVITAAEAPCKNA-----AMLYRNVRMMNVVCEVLQKQA- 100
Query: 125 IKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 184
I++ I++S+D VY ++D+ E S PT+ + EM++ + + +
Sbjct: 101 IQQVIYISSDAVYADSDQPLT----ETSVTAPTSLHGVMHLAREMMLQSVCSENNISLAI 156
Query: 185 TRGNNVYGPNQFPEKLIP-KFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG 243
R + +YG P +F LA + + + G+G R ++Y +DVAE ++ +
Sbjct: 157 LRPSLLYGAEDPHNGYGPNRFRRLADNHESIILFGEGEEQRDHVYIDDVAEIITRVIQRC 216
Query: 244 EVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVE-NRPFNDQRYFLDVQKLKQLG 302
G V NI T + +A + +L + Q + + P N R F K
Sbjct: 217 SRG-VLNIATGQVISFKQLAEKVVQLSNNEVAIQPSPRQGSMPHNGYRPFDITDCQKAFP 275
Query: 303 WYERVTWEEGLQ 314
+ + E+GLQ
Sbjct: 276 DFSYTSIEDGLQ 287
Score = 57 (25.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 6 TPKNILITGAAGFIASHVCNRL 27
TP +++ GA GF+ +C RL
Sbjct: 10 TPSRVVVLGANGFVGRALCQRL 31
>UNIPROTKB|P77398 [details] [associations]
symbol:arnA "fused UDP-L-Ara4N formyltransferase and
UDP-GlcA C-4''-decarboxylase" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0046677
"response to antibiotic" evidence=IEA;IDA] [GO:0016742
"hydroxymethyl-, formyl- and related transferase activity"
evidence=IEA;IDA] [GO:0016616 "oxidoreductase activity, acting on
the CH-OH group of donors, NAD or NADP as acceptor" evidence=IDA]
[GO:0009245 "lipid A biosynthetic process" evidence=IEA;IDA]
UniPathway:UPA00032 HAMAP:MF_01166 InterPro:IPR001509
InterPro:IPR002376 InterPro:IPR005793 InterPro:IPR011034
InterPro:IPR021168 Pfam:PF00551 Pfam:PF01370 Pfam:PF02911
PIRSF:PIRSF036506 UniPathway:UPA00030 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR SUPFAM:SSF50486 GO:GO:0046677 GO:GO:0009245
GO:GO:0016616 GO:GO:0016742 GO:GO:0008168 Gene3D:3.10.25.10
Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0009103 EMBL:AY057445
PIR:E64996 RefSeq:NP_416758.1 RefSeq:YP_490494.1 PDB:1U9J PDB:1YRW
PDB:1Z73 PDB:1Z74 PDB:1Z75 PDB:1Z7B PDB:1Z7E PDB:2BLL PDB:2BLN
PDBsum:1U9J PDBsum:1YRW PDBsum:1Z73 PDBsum:1Z74 PDBsum:1Z75
PDBsum:1Z7B PDBsum:1Z7E PDBsum:2BLL PDBsum:2BLN
ProteinModelPortal:P77398 SMR:P77398 DIP:DIP-11961N IntAct:P77398
MINT:MINT-1257581 PaxDb:P77398 PRIDE:P77398
EnsemblBacteria:EBESCT00000003653 EnsemblBacteria:EBESCT00000017866
GeneID:12931503 GeneID:947683 KEGG:ecj:Y75_p2218 KEGG:eco:b2255
PATRIC:32119875 EchoBASE:EB3844 EcoGene:EG14091
HOGENOM:HOG000247761 KO:K10011 OMA:VRYCVKY ProtClustDB:PRK08125
BioCyc:EcoCyc:G7168-MONOMER BioCyc:ECOL316407:JW2249-MONOMER
BioCyc:MetaCyc:G7168-MONOMER SABIO-RK:P77398
EvolutionaryTrace:P77398 Genevestigator:P77398 Uniprot:P77398
Length = 660
Score = 147 (56.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 71/284 (25%), Positives = 120/284 (42%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLD-KLDYCSNLKNLNPSRLSPNFKFIKGDVA 68
+LI G GFI +H+ RL+ Y++ LD D S N P+F F++GD++
Sbjct: 318 VLILGVNGFIGNHLTERLLRE-DHYEVYGLDIGSDAISRFLN------HPHFHFVEGDIS 370
Query: 69 -SADLVHFILLTEKIDTIMHFAA-QTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIK 126
++ + + + +K D ++ A T ++ + N + + ++ C K
Sbjct: 371 IHSEWIEYHV--KKCDVVLPLVAIATPIEYT-RNPLRVFELDFEENLRIIRYC--VKYRK 425
Query: 127 RFIHVSTDEVYGETDEDAVVGNHEASQLLPTN-P---YSATKAGAEMLVMAYGRSYGLPV 182
R I ST EVYG + +H + P N P YS +K + ++ AYG GL
Sbjct: 426 RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQF 485
Query: 183 ITTRGNNVYGP---NQFPEKL-----IPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAE 234
R N GP N ++ I + IL ++G P+ + G R + D E
Sbjct: 486 TLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIE 545
Query: 235 AFDTILHK-GEV--GHVYNIGT-KKERRVIDVATDICKLFSLNP 274
A I+ G G + NIG + E + ++ + F +P
Sbjct: 546 ALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHP 589
Score = 37 (18.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 5/25 (20%), Positives = 14/25 (56%)
Query: 301 LGWYERVTWEEGLQKTMKWYISNPD 325
L W ++ +E + +T+ +++ D
Sbjct: 630 LDWEPKIDMQETIDETLDFFLRTVD 654
>UNIPROTKB|E9PI88 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=IEA] [GO:0019673 "GDP-mannose
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 GO:GO:0019673 EMBL:AL034344 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 EMBL:AL033517 EMBL:AL035693 EMBL:AL137179
EMBL:AL158139 RefSeq:NP_001240775.1 UniGene:Hs.144496
UniGene:Hs.660919 GeneID:2762 KEGG:hsa:2762 CTD:2762 HGNC:HGNC:4369
ChiTaRS:GMDS GenomeRNAi:2762 EMBL:AL354670 EMBL:AL451141
EMBL:AL591048 IPI:IPI00642048 ProteinModelPortal:E9PI88 SMR:E9PI88
Ensembl:ENST00000530927 UCSC:uc021ykn.1 ArrayExpress:E9PI88
Bgee:E9PI88 Uniprot:E9PI88
Length = 342
Score = 133 (51.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 42/133 (31%), Positives = 65/133 (48%)
Query: 52 NP-SRLSPNFKFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKN-NI 109
NP + + N K GD+ + + I+ K I + AQ+HV SF + E+T + +
Sbjct: 41 NPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDG 99
Query: 110 YGTHVLLEACKITGQIK--RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 167
GT LL+A K G I +F ST E+YG+ E + E + P +PY A K A
Sbjct: 100 VGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQE---IPQKETTPFYPRSPYGAAKLYA 156
Query: 168 EMLVMAYGRSYGL 180
+V+ + +Y L
Sbjct: 157 YWIVVNFREAYNL 169
>UNIPROTKB|F6W683 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9796 "Equus
caballus" [GO:0005575 "cellular_component" evidence=ND] [GO:0007219
"Notch signaling pathway" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0019673 "GDP-mannose
metabolic process" evidence=ISS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401 "NADP+
binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
OMA:IAYNLTD Ensembl:ENSECAT00000001963 Uniprot:F6W683
Length = 343
Score = 133 (51.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 42/133 (31%), Positives = 65/133 (48%)
Query: 52 NP-SRLSPNFKFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKN-NI 109
NP + + N K GD+ + + I+ K I + AQ+HV SF + E+T + +
Sbjct: 42 NPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDG 100
Query: 110 YGTHVLLEACKITGQIK--RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 167
GT LL+A K G I +F ST E+YG+ E + E + P +PY A K A
Sbjct: 101 VGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQE---IPQKETTPFYPRSPYGAAKLYA 157
Query: 168 EMLVMAYGRSYGL 180
+V+ + +Y L
Sbjct: 158 YWIVVNFREAYNL 170
>MGI|MGI:1921496 [details] [associations]
symbol:Gale "galactose-4-epimerase, UDP" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISO;IDA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA] [GO:0006012 "galactose metabolic
process" evidence=IDA] [GO:0016853 "isomerase activity"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0019388
"galactose catabolic process" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 MGI:MGI:1921496 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
CTD:2582 HOVERGEN:HBG001396 OrthoDB:EOG4B5P5D EMBL:BC027438
IPI:IPI00153129 RefSeq:NP_848476.1 UniGene:Mm.247946
ProteinModelPortal:Q8R059 SMR:Q8R059 STRING:Q8R059
PhosphoSite:Q8R059 PaxDb:Q8R059 PRIDE:Q8R059
Ensembl:ENSMUST00000102540 Ensembl:ENSMUST00000102541 GeneID:74246
KEGG:mmu:74246 InParanoid:Q8R059 ChiTaRS:GALE NextBio:340230
Bgee:Q8R059 CleanEx:MM_GALE Genevestigator:Q8R059
GermOnline:ENSMUSG00000028671 Uniprot:Q8R059
Length = 347
Score = 133 (51.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 60/260 (23%), Positives = 102/260 (39%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRL-------SPNF 60
+ +L+TG AG+I SH L+ Y VV+D ++ P L +
Sbjct: 2 EKVLVTGGAGYIGSHTVLELLE--AGYSPVVIDNFHNAIRGEDSMPESLRRVQELTGRSV 59
Query: 61 KFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 120
+F + D+ + + ++HFA V S ++ + N+ GT LLE +
Sbjct: 60 EFEEMDILDQAALQHLFKKHSFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMR 119
Query: 121 ITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS--- 177
G +K + S+ VYG + H TNPY +K E ++ R+
Sbjct: 120 AHG-VKNLVFSSSATVYGNPQYLPLDEAHPTGGC--TNPYGKSKFFIEEMIRDLCRADTA 176
Query: 178 -------YGLPVITTRGNNV-YGPNQFPEKLIPKFILLAM-KGKPLPIHGD------GSN 222
Y P+ + P P L+P +A+ + + L + GD G+
Sbjct: 177 WNAVLLRYFNPIGAHASGRIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDGTG 236
Query: 223 VRSYLYCEDVAEAFDTILHK 242
VR Y++ D+A+ L K
Sbjct: 237 VRDYIHVVDLAKGHIAALKK 256
>RGD|621493 [details] [associations]
symbol:Gale "UDP-galactose-4-epimerase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA;ISO]
[GO:0006012 "galactose metabolic process" evidence=IEA;ISO]
[GO:0019388 "galactose catabolic process" evidence=ISO] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 RGD:621493 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 HOVERGEN:HBG001396
OrthoDB:EOG4B5P5D EMBL:X53949 IPI:IPI00193573 PIR:S11223
UniGene:Rn.29908 ProteinModelPortal:P18645 SMR:P18645 STRING:P18645
PRIDE:P18645 InParanoid:P18645 ArrayExpress:P18645
Genevestigator:P18645 GermOnline:ENSRNOG00000009712 Uniprot:P18645
Length = 347
Score = 133 (51.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 61/261 (23%), Positives = 105/261 (40%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRL-------SPNF 60
+ +L+TG AG+I SH L+ Y VV+D ++ P L +
Sbjct: 3 EKVLVTGGAGYIGSHTVLELLE--AGYSPVVIDNFHNSIRGEDSMPESLRRVQELTGRSV 60
Query: 61 KFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 120
+F + D+ + + ++HFA V S ++ + N+ GT LLE +
Sbjct: 61 EFEEMDILDQAALQHLFKKHNFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMR 120
Query: 121 ITGQIKRFIHVSTDEVYGETDEDAVVGN-HEASQLLPTNPYSATKAGAEMLVMAYGRS-- 177
G +K + S+ VYG+ + G H T PY +K E ++ R+
Sbjct: 121 AMG-VKSLVFSSSATVYGKPVPASGRGPPHRGC----TKPYGKSKFFIEEMIQDLCRADT 175
Query: 178 --------YGLPVITTRGNNV-YGPNQFPEKLIPKFILLAM-KGKPLPIHGD------GS 221
Y +P+ R + P P L+P +A+ + + L + GD G+
Sbjct: 176 AWNAVLLRYFIPIGAHRSARIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDGT 235
Query: 222 NVRSYLYCEDVAEAFDTILHK 242
VR Y++ D+A+ L K
Sbjct: 236 GVRDYIHVVDLAKGHIAALKK 256
>MGI|MGI:104645 [details] [associations]
symbol:Hsd3b5 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 5" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005743
"mitochondrial inner membrane" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016616
"oxidoreductase activity, acting on the CH-OH group of donors, NAD
or NADP as acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
UniPathway:UPA00062 InterPro:IPR016040 MGI:MGI:104645 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070
OrthoDB:EOG4K3KWG GO:GO:0005743 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0006694
GeneTree:ENSGT00550000074557 EMBL:L41519 EMBL:BC012715
IPI:IPI00314189 PIR:A57559 RefSeq:NP_032321.2 UniGene:Mm.17910
ProteinModelPortal:Q61694 SMR:Q61694 STRING:Q61694
PhosphoSite:Q61694 PaxDb:Q61694 PRIDE:Q61694
Ensembl:ENSMUST00000044094 GeneID:15496 KEGG:mmu:15496
UCSC:uc008qpw.2 CTD:15496 InParanoid:Q61694 OMA:DACVEAS
NextBio:288382 Bgee:Q61694 Genevestigator:Q61694
GermOnline:ENSMUSG00000038092 GO:GO:0035634 Uniprot:Q61694
Length = 373
Score = 118 (46.6 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 43/167 (25%), Positives = 75/167 (44%)
Query: 11 LITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASA 70
L+TGA GF+ + L+ +I L + + + L+ + + +KGD+ A
Sbjct: 7 LVTGAGGFLGQRIVRMLVQEEELQEIRALFRTFGRKHEEELSKLQTKAKVRVLKGDILDA 66
Query: 71 DLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEACKITGQIKRFI 129
+ + + ++H AA +D S + + N+ GT +LL+AC + + FI
Sbjct: 67 QCLK--RACQGMSAVIHTAAA--IDPLGAASRQTILDVNLKGTQLLLDAC-VEASVPTFI 121
Query: 130 HVSTDEVYGETDEDAVVGN-HEASQLLPT--NPYSATKAGAEMLVMA 173
+ S+ V G ++ N HE T NPY +K AE V+A
Sbjct: 122 YSSSVLVAGPNSYKEIILNAHEEEHRESTWPNPYPYSKRMAEKAVLA 168
Score = 60 (26.2 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 299 KQLGWYERVTWEEGLQKTMKW 319
+ LG+ V+WEE QKT +W
Sbjct: 336 RDLGYQPLVSWEEAKQKTSEW 356
>TIGR_CMR|SO_1745 [details] [associations]
symbol:SO_1745 "3-beta hydroxysteroid
dehydrogenase/isomerase family protein" species:211586 "Shewanella
oneidensis MR-1" [GO:0006694 "steroid biosynthetic process"
evidence=ISS] [GO:0016229 "steroid dehydrogenase activity"
evidence=ISS] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 GO:GO:0016853 EMBL:AE014299 GenomeReviews:AE014299_GR
OMA:PQVTRYR ProtClustDB:CLSK906403 RefSeq:NP_717355.1
ProteinModelPortal:Q8EG63 GeneID:1169523 KEGG:son:SO_1745
PATRIC:23523115 BioCyc:MetaCyc:MONOMER-17300 Uniprot:Q8EG63
Length = 387
Score = 133 (51.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 58/232 (25%), Positives = 106/232 (45%)
Query: 12 ITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASAD 71
+TGA GF+ +C RLI K+ + Y L+ L + ++GD+ + +
Sbjct: 58 VTGAGGFLGKAICQRLIA--AGIKVTGFARGRYLE-LEALGVT-------MVQGDLVNPE 107
Query: 72 LVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHV 131
V + + D + H A++ V +G+ + N+ G ++ ACK +I + ++
Sbjct: 108 QVKQAM--QGCDIVFHVASKAGV---WGDRDSYFCPNVKGAANVIAACKAL-KINKLVYT 161
Query: 132 STDEV-YGETDEDAV-VGNHEASQLLPTNPYSATKAGAEMLVMAYGRS------YGLPVI 183
ST V + DE + AS+ L N Y+ +KA AE +++ +S Y L +
Sbjct: 162 STPSVTFAGEDESGINESTPYASRFL--NYYAHSKAIAEKMMLDANQSSSTNAAYVLKTV 219
Query: 184 TTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEA 235
R + ++GPN P L+P+ + GK L + G + +Y ++ A A
Sbjct: 220 ALRPHLIWGPND-PH-LVPRVLARGRLGK-LKLVGREDKLVDTIYIDNAAYA 268
>UNIPROTKB|P14893 [details] [associations]
symbol:HSD3B "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase" species:9913 "Bos taurus" [GO:0030868 "smooth
endoplasmic reticulum membrane" evidence=IDA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0031966 "mitochondrial
membrane" evidence=IEA] [GO:0004769 "steroid delta-isomerase
activity" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 GO:GO:0016021 CTD:3283 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG
GO:GO:0030868 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
Gene3D:3.40.50.720 OMA:MAGWSCL GO:GO:0031966 GO:GO:0006694
GeneTree:ENSGT00550000074557 EMBL:X17614 EMBL:BC111203
IPI:IPI00703764 PIR:S07102 RefSeq:NP_776768.1 UniGene:Bt.111390
ProteinModelPortal:P14893 STRING:P14893 PRIDE:P14893
Ensembl:ENSBTAT00000010992 GeneID:281824 KEGG:bta:281824
InParanoid:P14893 NextBio:20805734 Uniprot:P14893
Length = 373
Score = 119 (46.9 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 46/168 (27%), Positives = 76/168 (45%)
Query: 11 LITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKF--IKGDVA 68
L+TG GF+ + L+ +I VLDK+ + ++ S+L K ++GD+
Sbjct: 7 LVTGGGGFLGQRIICLLVEEKDLQEIRVLDKV-FRPEVRE-EFSKLQSKIKLTLLEGDIL 64
Query: 69 SADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEACKITGQIKR 127
+ + ++H A+ V N+ E N N+ GT +LLEAC + +
Sbjct: 65 DEQCLKGAC--QGTSVVIHTASVIDVRNAVPR--ETIMNVNVKGTQLLLEAC-VQASVPV 119
Query: 128 FIHVSTDEVYGETDEDAVV--GNHEAS-QLLPTNPYSATKAGAEMLVM 172
FIH ST EV G ++ G E + ++PY +K AE V+
Sbjct: 120 FIHTSTIEVAGPNSYREIIQDGREEEHHESAWSSPYPYSKKLAEKAVL 167
Score = 58 (25.5 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 299 KQLGWYERVTWEEGLQKTMKW 319
+ LG+ TWEE QKT +W
Sbjct: 336 RDLGYEPLYTWEEAKQKTKEW 356
>TIGR_CMR|GSU_2365 [details] [associations]
symbol:GSU_2365 "dTDP-4-dehydrorhamnose reductase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=ISS]
[GO:0009243 "O antigen biosynthetic process" evidence=ISS]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR005913 Pfam:PF04321 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0008831 GO:GO:0045226 KO:K00067 TIGRFAMs:TIGR01214
HOGENOM:HOG000227711 HSSP:P26392 RefSeq:NP_953412.1
ProteinModelPortal:Q74AI9 GeneID:2686653 KEGG:gsu:GSU2365
PATRIC:22027579 OMA:TWAGRIA ProtClustDB:CLSK828807
BioCyc:GSUL243231:GH27-2367-MONOMER Uniprot:Q74AI9
Length = 280
Score = 130 (50.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 63/223 (28%), Positives = 101/223 (45%)
Query: 388 LIYGRTGWIGGLLSKIC--EKKGIPFEYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGR 445
L+ G G +G L ++ + +G+ E + + + + I +KP V N A T
Sbjct: 3 LVVGAKGMLGRDLMRVLPGDVRGVDIE--EIDITSPESVRRVILTLKPRVVVNCAAYT-- 58
Query: 446 PNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIGFKE 505
+VD CET+ + N G LA V RE G L++ +T +F+ + P F E
Sbjct: 59 -DVDGCETNADLAMAVNGEGVGHLAAVTREIGALLVQMSTDYVFDGVKESP------FLE 111
Query: 506 EDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNK---- 561
+D PN S Y ++K M EE +E + L VR L +NF+ + R +
Sbjct: 112 DDPPNPL-SVYGRSKLMGEEQARETPD--HLIVRTQWLYGLGG-KNFVETMLRLSTERSE 167
Query: 562 --VVN--IPNSMTILDELLPISVEMAKRNLSGIWNFTNPGVVS 600
VV+ I + +D L IS E+ + N G ++ N G+ S
Sbjct: 168 IAVVDDQIGSPTWTVDLALAIS-ELIENNCRGTYHAANRGICS 209
>UNIPROTKB|Q4QRB0 [details] [associations]
symbol:Gale "Gale protein" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 RGD:621493 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 KO:K01784 EMBL:CH473968
GeneTree:ENSGT00530000063128 CTD:2582 HOVERGEN:HBG001396
UniGene:Rn.29908 EMBL:BC097293 IPI:IPI00882523 RefSeq:NP_542961.2
SMR:Q4QRB0 STRING:Q4QRB0 Ensembl:ENSRNOT00000013322 GeneID:114860
KEGG:rno:114860 InParanoid:Q4QRB0 NextBio:618919
Genevestigator:Q4QRB0 Uniprot:Q4QRB0
Length = 348
Score = 132 (51.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 60/260 (23%), Positives = 102/260 (39%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRL-------SPNF 60
+ +L+TG AG+I SH L+ Y VV+D ++ P L +
Sbjct: 3 EKVLVTGGAGYIGSHTVLELLE--AGYSPVVIDNFHNSIRGEDSMPESLRRVQELTGRSV 60
Query: 61 KFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 120
+F + D+ + + ++HFA V S ++ + N+ GT LLE +
Sbjct: 61 EFEEMDILDQAALQHLFKKHNFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMR 120
Query: 121 ITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS--- 177
G +K + S+ VYG + H TNPY +K E ++ R+
Sbjct: 121 AHG-VKSLVFSSSATVYGNPQYLPLDEAHPTGGC--TNPYGKSKFFIEEMIQDLCRADTA 177
Query: 178 -------YGLPVITTRGNNV-YGPNQFPEKLIPKFILLAM-KGKPLPIHGD------GSN 222
Y P+ + P P L+P +A+ + + L + GD G+
Sbjct: 178 WNAVLLRYFNPIGAHASGRIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDGTG 237
Query: 223 VRSYLYCEDVAEAFDTILHK 242
VR Y++ D+A+ L K
Sbjct: 238 VRDYIHVVDLAKGHIAALKK 257
>UNIPROTKB|Q47WH1 [details] [associations]
symbol:CPS_4200 "NAD-dependent epimerase/dehydratase family
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225 EMBL:CP000083
GenomeReviews:CP000083_GR HOGENOM:HOG000168011 KO:K02377
OMA:ASVHVMN RefSeq:YP_270851.1 ProteinModelPortal:Q47WH1
STRING:Q47WH1 GeneID:3522019 KEGG:cps:CPS_4200 PATRIC:21471263
ProtClustDB:CLSK2768411 BioCyc:CPSY167879:GI48-4210-MONOMER
Uniprot:Q47WH1
Length = 313
Score = 131 (51.2 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 71/286 (24%), Positives = 128/286 (44%)
Query: 56 LSPNFKFIKGDVASADLVHFILLTEKIDTIMHFAAQTH-VDNSFGNSFEFTKNNIYGTHV 114
L+P+ K + ++ A L+ K D I+H A + + + +F +N+
Sbjct: 28 LTPSSKVL--NLLDAASTQAYLVEHKPDMIIHAAGVVGGIQANMAHPVKFLVDNMQMGLN 85
Query: 115 LLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEA----SQLLPTNP-YSATKAGAEM 169
+L + K G IK+F+++S+ +Y DA+ E +L PTN Y+ K +
Sbjct: 86 ILNSAKNCG-IKQFLNLSSSCMY---PRDALNPLSEELILKGELEPTNEGYALAKIASTR 141
Query: 170 LVMAYGRSYGLPVI---TTRGNNVYGPN-QF-PEK--LIPKFI--LLAMKGKPLP---IH 217
L Y S+ P + T N+YG + +F P +IP I ++ K K L I
Sbjct: 142 LC-EY-ISHEEPELLYKTIIPCNLYGRHDKFSPHNSHMIPAVIRKVIDAKQKDLTEIDIW 199
Query: 218 GDGSNVRSYLYCEDVAE-AFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDT 276
GDG R ++Y D+A+ F I + + N+G ++ + D I ++ +
Sbjct: 200 GDGKARREFMYAGDLADFIFYAIANFSRMPQNLNVGLGEDFTINDYYQRIAEIIGFSGT- 258
Query: 277 QIKFVENRPFNDQRYFLDVQKLKQLGWYERVTWEEGLQKTMKWYIS 322
K +P ++ +D KL GW + EGL+ T+++++S
Sbjct: 259 -FKHDLTKPVGMKQKLIDDNKLNAFGWSYKTDLTEGLKNTVQFFLS 303
>TIGR_CMR|CPS_4200 [details] [associations]
symbol:CPS_4200 "NAD-dependent epimerase/dehydratase
family protein" species:167879 "Colwellia psychrerythraea 34H"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:CP000083 GenomeReviews:CP000083_GR
HOGENOM:HOG000168011 KO:K02377 OMA:ASVHVMN RefSeq:YP_270851.1
ProteinModelPortal:Q47WH1 STRING:Q47WH1 GeneID:3522019
KEGG:cps:CPS_4200 PATRIC:21471263 ProtClustDB:CLSK2768411
BioCyc:CPSY167879:GI48-4210-MONOMER Uniprot:Q47WH1
Length = 313
Score = 131 (51.2 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 71/286 (24%), Positives = 128/286 (44%)
Query: 56 LSPNFKFIKGDVASADLVHFILLTEKIDTIMHFAAQTH-VDNSFGNSFEFTKNNIYGTHV 114
L+P+ K + ++ A L+ K D I+H A + + + +F +N+
Sbjct: 28 LTPSSKVL--NLLDAASTQAYLVEHKPDMIIHAAGVVGGIQANMAHPVKFLVDNMQMGLN 85
Query: 115 LLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEA----SQLLPTNP-YSATKAGAEM 169
+L + K G IK+F+++S+ +Y DA+ E +L PTN Y+ K +
Sbjct: 86 ILNSAKNCG-IKQFLNLSSSCMY---PRDALNPLSEELILKGELEPTNEGYALAKIASTR 141
Query: 170 LVMAYGRSYGLPVI---TTRGNNVYGPN-QF-PEK--LIPKFI--LLAMKGKPLP---IH 217
L Y S+ P + T N+YG + +F P +IP I ++ K K L I
Sbjct: 142 LC-EY-ISHEEPELLYKTIIPCNLYGRHDKFSPHNSHMIPAVIRKVIDAKQKDLTEIDIW 199
Query: 218 GDGSNVRSYLYCEDVAE-AFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDT 276
GDG R ++Y D+A+ F I + + N+G ++ + D I ++ +
Sbjct: 200 GDGKARREFMYAGDLADFIFYAIANFSRMPQNLNVGLGEDFTINDYYQRIAEIIGFSGT- 258
Query: 277 QIKFVENRPFNDQRYFLDVQKLKQLGWYERVTWEEGLQKTMKWYIS 322
K +P ++ +D KL GW + EGL+ T+++++S
Sbjct: 259 -FKHDLTKPVGMKQKLIDDNKLNAFGWSYKTDLTEGLKNTVQFFLS 303
>TAIR|locus:2058223 [details] [associations]
symbol:AT2G43420 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA;ISS] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006694 "steroid biosynthetic process" evidence=IEA;ISS]
[GO:0016616 "oxidoreductase activity, acting on the CH-OH group of
donors, NAD or NADP as acceptor" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
UniPathway:UPA00770 InterPro:IPR002225 InterPro:IPR003388
Pfam:PF01073 Pfam:PF02453 PROSITE:PS50845 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005886 GO:GO:0009506 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0451 HOGENOM:HOG000167989
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789
GO:GO:0016126 EMBL:AC002335 GO:GO:0047012 UniGene:At.12188
EMBL:DQ415280 EMBL:AK117930 EMBL:AY045841 IPI:IPI00543388
PIR:H84865 RefSeq:NP_565998.1 UniGene:At.59216
ProteinModelPortal:A9X4U2 SMR:A9X4U2 PaxDb:A9X4U2 PRIDE:A9X4U2
EnsemblPlants:AT2G43420.1 GeneID:818943 KEGG:ath:AT2G43420
TAIR:At2g43420 InParanoid:Q94AR9 OMA:HAHICAA PhylomeDB:A9X4U2
ProtClustDB:CLSN2688905 Genevestigator:A9X4U2 Uniprot:A9X4U2
Length = 561
Score = 128 (50.1 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 57/234 (24%), Positives = 99/234 (42%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDK-----LDYCSNLKNLNPSRLSPNFKF 62
K ++ G GFI + +RL+ + + V D LD +L L + S +
Sbjct: 13 KTCVVLGGRGFIGRSLVSRLL-RLGNWTVRVADSGHTLHLDESDSL--LEDALSSGRASY 69
Query: 63 IKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKIT 122
DV D + +TE + + A D + F+ K + GT ++ AC+ +
Sbjct: 70 HCVDVR--DKPQIVKVTEGSYVVFYMGA---TDLRSHDYFDCYKVIVQGTRNVISACRES 124
Query: 123 GQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLP-TNPYSATKAGAEMLVMAYGRSYGLP 181
G +++ I+ ST +V + + G+ + L + + KA AE L+ GL
Sbjct: 125 G-VRKLIYNSTADVVFDGSQPIRDGDESLRRPLKFQSMLTDFKAQAEALIKLANNRDGLL 183
Query: 182 VITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEA 235
R + V+GP + +P + LA G I G G N+ + Y E+V+ A
Sbjct: 184 TCALRSSIVFGPGD--TEFVPFLVNLAKSGYAKFILGSGENISDFTYSENVSHA 235
Score = 54 (24.1 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 299 KQLGWYERVTWEEGLQKTMKWY 320
K LG+ VT E+G+ T++W+
Sbjct: 333 KHLGYTPVVTLEDGIASTLQWF 354
Score = 40 (19.1 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 638 ELDASKLKKEFPELLSIKESLIKNVFEPNKKPTF 671
EL+ L + F E L+ + ++ V + + KP F
Sbjct: 527 ELELYHLARIFVECLTFIKRMVIPVSDASSKPMF 560
>UNIPROTKB|C9JDR0 [details] [associations]
symbol:NSDHL "Sterol-4-alpha-carboxylate 3-dehydrogenase,
decarboxylating" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IEA]
[GO:0007224 "smoothened signaling pathway" evidence=IEA]
[GO:0008203 "cholesterol metabolic process" evidence=IEA]
[GO:0060716 "labyrinthine layer blood vessel development"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
GO:GO:0005783 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GO:GO:0008203 GO:GO:0001942
GO:GO:0060716 GO:GO:0007224 EMBL:U82671 HGNC:HGNC:13398
IPI:IPI00646262 ProteinModelPortal:C9JDR0 SMR:C9JDR0 STRING:C9JDR0
PRIDE:C9JDR0 Ensembl:ENST00000432467 ArrayExpress:C9JDR0
Bgee:C9JDR0 Uniprot:C9JDR0
Length = 254
Score = 128 (50.1 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 49/191 (25%), Positives = 85/191 (44%)
Query: 44 YCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFE 103
Y N+ ++ +P +F GD+ S ++ L + ++T+ H A+ N N
Sbjct: 62 YAVNVFDIQQGFDNPQVRFFLGDLCSRQDLYPAL--KGVNTVFHCASPPPSSN---NKEL 116
Query: 104 FTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLL-PTNPYSA 162
F + N GT ++E CK G +++ I S+ V E D G + + P + Y+
Sbjct: 117 FYRVNYIGTKNVIETCKEAG-VQKLILTSSASVIFE-GVDIKNGTEDLPYAMKPIDYYTE 174
Query: 163 TKAGAEMLVM-AYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGS 221
TK E V+ A R + ++GP P+ L+P I A GK + G+G
Sbjct: 175 TKILQERAVLGANDPEKNFLTTAIRPHGIFGPRD-PQ-LVPILIEAARNGKMKFVIGNGK 232
Query: 222 NVRSYLYCEDV 232
N+ + + E+V
Sbjct: 233 NLVDFTFVENV 243
>MGI|MGI:1921282 [details] [associations]
symbol:Sdr42e1 "short chain dehydrogenase/reductase family
42E, member 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0006694 "steroid biosynthetic
process" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016616 "oxidoreductase activity,
acting on the CH-OH group of donors, NAD or NADP as acceptor"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
MGI:MGI:1921282 GO:GO:0016021 eggNOG:COG0451 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00550000074557 CTD:93517 HOGENOM:HOG000168007
OrthoDB:EOG40ZQZ0 EMBL:AK014586 EMBL:BC018550 EMBL:BC038819
IPI:IPI00108565 RefSeq:NP_083001.1 UniGene:Mm.296302
ProteinModelPortal:Q9D665 SMR:Q9D665 PhosphoSite:Q9D665
PaxDb:Q9D665 PRIDE:Q9D665 Ensembl:ENSMUST00000037955
Ensembl:ENSMUST00000173522 GeneID:74032 KEGG:mmu:74032
UCSC:uc009npd.1 InParanoid:Q9D665 OMA:FYNFQPF NextBio:339586
Bgee:Q9D665 Genevestigator:Q9D665 Uniprot:Q9D665
Length = 394
Score = 132 (51.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 61/258 (23%), Positives = 116/258 (44%)
Query: 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIK 64
+ + +LITG G+ + L N ++++ D NL P + KF+
Sbjct: 6 FPEETVLITGGGGYFGFRLGCAL--NQKGARVILFDITQPAQNL----PEGI----KFVC 55
Query: 65 GDVAS-ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITG 123
GD+ AD+ EK+ + H A+ N + + N+ GT +L AC G
Sbjct: 56 GDIRCLADVETAFQDAEKVACVFHVASYGMSGREQLNKTQIEEVNVGGTENILRACLERG 115
Query: 124 QIKRFIHVST-DEVYGETDEDAVVGNHEASQLLPTN--P--YSATKAGAEMLVM-AYGRS 177
+ R ++ ST + ++G + E+ LP + P YS TK+ AE V+ A G +
Sbjct: 116 -VPRLVYTSTFNVIFGG---QVIRNGDESLPYLPLHLHPDHYSRTKSIAEKKVLEANGLA 171
Query: 178 Y--GLPVITT---RGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDV 232
+ G ++ T R +YG + ++ +P+ + +G ++GD ++ +++ +++
Sbjct: 172 FKQGDGILRTCAIRPAGIYGAGE--QRHLPRIVSYIERGLFRFVYGDPQSLVEFVHVDNL 229
Query: 233 AEAFDTILH--KGEVGHV 248
A+A K + GHV
Sbjct: 230 AKAHILASEALKADKGHV 247
>TIGR_CMR|CPS_0594 [details] [associations]
symbol:CPS_0594 "polysaccharide biosynthesis protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR003869 Pfam:PF02719
InterPro:IPR016040 GO:GO:0009058 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG1086
HOGENOM:HOG000257078 RefSeq:YP_267344.1 ProteinModelPortal:Q489C0
STRING:Q489C0 DNASU:3518931 GeneID:3518931 KEGG:cps:CPS_0594
PATRIC:21464517 OMA:HVPMVEH ProtClustDB:CLSK907040
BioCyc:CPSY167879:GI48-681-MONOMER Uniprot:Q489C0
Length = 646
Score = 135 (52.6 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 42/178 (23%), Positives = 81/178 (45%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNL--KNLNPSR----LSPNFK 61
K +++TGA G I S +C ++I P K+V+ + ++ K LN + L+
Sbjct: 281 KVVMVTGAGGSIGSELCRQIIRLKPT-KLVLFELSEFGLYTIDKELNEYKQQHDLAVEVL 339
Query: 62 FIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKI 121
+ G V + + ++ + + T+ H AA HV N E +NN++GT+ A I
Sbjct: 340 PLLGSVQRVNRIETVMKSFAVQTVYHAAAYKHVPLVEHNVVEGVRNNVFGTYYAARAA-I 398
Query: 122 TGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG 179
++ F+ +STD+ T+ ++G + L + T+ ++ +G G
Sbjct: 399 NANVETFVLISTDKAVRPTN---IMGTTKRMAELVLQALAKTQHSTRFCMVRFGNVLG 453
>DICTYBASE|DDB_G0284553 [details] [associations]
symbol:gmd "GDP-mannose dehydratase" species:44689
"Dictyostelium discoideum" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA;ISS] [GO:0016829 "lyase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 dictyBase:DDB_G0284553
GenomeReviews:CM000153_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005622 EMBL:AAFI02000066 GO:GO:0019673
GO:GO:0042351 eggNOG:COG1089 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 RefSeq:XP_001134543.1 ProteinModelPortal:Q1ZXF7
SMR:Q1ZXF7 STRING:Q1ZXF7 EnsemblProtists:DDB0231676 GeneID:8624624
KEGG:ddi:DDB_G0284553 ProtClustDB:CLSZ2432853 Uniprot:Q1ZXF7
Length = 356
Score = 130 (50.8 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 62/249 (24%), Positives = 110/249 (44%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNL----NPSRLSPNFK 61
K LITG G S++ LI Y ++ K+ + N +KN+ + + +
Sbjct: 6 KVALITGITGQDGSYLTEFLISK-GYYVHGIIQKIFHHFNTIVKNIYIKIDMLKEKESLT 64
Query: 62 FIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLEACK 120
GD+ A +H I+ I + AQ+HV SF S E+T + + G LL+A +
Sbjct: 65 LHYGDLTDASNLHSIVSKVNPTEIYNLGAQSHVKVSFDMS-EYTGDVDGLGCLRLLDAIR 123
Query: 121 ITGQIKR--FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY 178
G K+ + ST E+YG+ E + E + P +PY+ K A +V+ Y +Y
Sbjct: 124 SCGMEKKVKYYQASTSELYGKVQE---IPQSETTPFYPRSPYAVAKQYAYWIVVNYREAY 180
Query: 179 GL----PVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIH-GDGSNVRSYLYCEDVA 233
+ ++ + GP F + I +F+ G+ ++ G+ + R + + D
Sbjct: 181 DMYACNGILFNHESPRRGPT-FVTRKITRFVAGIACGRDEILYLGNINAKRDWGHARDYV 239
Query: 234 EAFDTILHK 242
EA +L +
Sbjct: 240 EAMWLMLQQ 248
>TAIR|locus:2051018 [details] [associations]
symbol:CRL2 "CCR(Cinnamoyl coA:NADP oxidoreductase)-like
2" species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0009809 "lignin biosynthetic process"
evidence=ISS] [GO:0016621 "cinnamoyl-CoA reductase activity"
evidence=ISS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
EMBL:CP002685 GenomeReviews:CT485783_GR eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
HOGENOM:HOG000167998 EMBL:AC002332 ProtClustDB:CLSN2683499
EMBL:AY093143 EMBL:BT008718 IPI:IPI00521551 PIR:E84747
RefSeq:NP_180918.1 UniGene:At.42953 ProteinModelPortal:O22810
SMR:O22810 PaxDb:O22810 PRIDE:O22810 EnsemblPlants:AT2G33600.1
GeneID:817926 KEGG:ath:AT2G33600 TAIR:At2g33600 InParanoid:O22810
OMA:EIDIGEH PhylomeDB:O22810 ArrayExpress:O22810
Genevestigator:O22810 Uniprot:O22810
Length = 321
Score = 129 (50.5 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 79/333 (23%), Positives = 143/333 (42%)
Query: 1 MATVYTPKNILITGAAGFIASHVCNRLIG-NYPEYKIVVLDKLDYCSNLKNLNPSRLSPN 59
MA V K + +TGA GF+ S V N L+ +Y + V + ++LK L+ +
Sbjct: 1 MAVVQKGK-VCVTGAGGFLGSWVVNHLLSRDYFVHGTVRDPGNEKYAHLKKLD--KAGDK 57
Query: 60 FKFIKGDVASADLVHFILLTEKI---DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLL 116
K K ADL+++ L I + H A + + + GT +L
Sbjct: 58 LKLFK-----ADLLNYGSLQSAIAGCSGVFHVACPVPSASVPNPEVDLIAPAVDGTLNVL 112
Query: 117 EACKITGQIKRFIHVST------DEVYGETDE-DAVVGNHEASQLLPTNPYSATKAGAEM 169
+AC + ++KR ++VS+ + ++ ++ D + + N YS +K AE
Sbjct: 113 KAC-VEAKVKRVVYVSSVSAVAMNPMWSKSQVLDETAWSDQDYCKKTENWYSLSKTRAES 171
Query: 170 LVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYC 229
+ + GL +++ V GP + + L+ +K + R +
Sbjct: 172 EAFEFAKRTGLDLVSVCPTLVLGP-VLQQHTVNASSLVLLKLLKEGYESRNNQERHLVDV 230
Query: 230 EDVAEAFDTILHKGEV-GHVYNIG-TKKERRVIDVATDICKLFSLNPDTQIKFVENRPFN 287
DVA+A + K E G IG T +E+ +VA + L+ LN + +++E
Sbjct: 231 RDVAQALLLVYEKAEAEGRYICIGHTVREQ---EVAEKLKSLY-LNYNYPKRYIEA---- 282
Query: 288 DQRYFLDVQKLKQLGWYERVTWEEGLQKTMKWY 320
D + + +KL++LGW R EE L +++ Y
Sbjct: 283 DGKVKVSSEKLQKLGWTYRPL-EETLVDSVESY 314
>UNIPROTKB|Q8ECH1 [details] [associations]
symbol:wbfY "Polysaccharide biosynthesis protein
epimerase/dehydratase-like WbfY" species:211586 "Shewanella
oneidensis MR-1" [GO:0000271 "polysaccharide biosynthetic process"
evidence=ISS] [GO:0003824 "catalytic activity" evidence=ISS]
InterPro:IPR003869 Pfam:PF02719 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0000271 HOGENOM:HOG000257078
OMA:HVPMVEH ProtClustDB:CLSK907040 RefSeq:NP_718727.1
ProteinModelPortal:Q8ECH1 GeneID:1170865 KEGG:son:SO_3171
PATRIC:23526026 Uniprot:Q8ECH1
Length = 646
Score = 133 (51.9 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 38/139 (27%), Positives = 68/139 (48%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVV-LDKLDYCSNLKNLNPS--RLSPNFKF-- 62
K +++TGA G I S +C +++ P+ ++ L + S + L+ + L + +
Sbjct: 281 KVVMVTGAGGSIGSELCRQILKQLPKQLVLFELSEFALYSIERELSATATELGIDVEIVP 340
Query: 63 IKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKIT 122
I G V + V ++ K+ T+ H AA HV N E +NN++GT A I
Sbjct: 341 IMGSVQRENRVQAVMQAFKVQTVYHAAAYKHVPLVEHNVVEGVRNNVFGTLYTARAA-IA 399
Query: 123 GQIKRFIHVSTDEVYGETD 141
+++ F+ VSTD+ T+
Sbjct: 400 AKVETFVLVSTDKAVRPTN 418
>TIGR_CMR|SO_3171 [details] [associations]
symbol:SO_3171 "polysaccharide biosynthesis protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR003869 Pfam:PF02719
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0000271
HOGENOM:HOG000257078 OMA:HVPMVEH ProtClustDB:CLSK907040
RefSeq:NP_718727.1 ProteinModelPortal:Q8ECH1 GeneID:1170865
KEGG:son:SO_3171 PATRIC:23526026 Uniprot:Q8ECH1
Length = 646
Score = 133 (51.9 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 38/139 (27%), Positives = 68/139 (48%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVV-LDKLDYCSNLKNLNPS--RLSPNFKF-- 62
K +++TGA G I S +C +++ P+ ++ L + S + L+ + L + +
Sbjct: 281 KVVMVTGAGGSIGSELCRQILKQLPKQLVLFELSEFALYSIERELSATATELGIDVEIVP 340
Query: 63 IKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKIT 122
I G V + V ++ K+ T+ H AA HV N E +NN++GT A I
Sbjct: 341 IMGSVQRENRVQAVMQAFKVQTVYHAAAYKHVPLVEHNVVEGVRNNVFGTLYTARAA-IA 399
Query: 123 GQIKRFIHVSTDEVYGETD 141
+++ F+ VSTD+ T+
Sbjct: 400 AKVETFVLVSTDKAVRPTN 418
>WB|WBGene00022498 [details] [associations]
symbol:hsd-2 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
HOGENOM:HOG000266975 EMBL:FO081655 PIR:T30003 RefSeq:NP_508851.1
ProteinModelPortal:Q23086 SMR:Q23086 EnsemblMetazoa:ZC8.1
GeneID:191049 KEGG:cel:CELE_ZC8.1 CTD:191049 WormBase:ZC8.1
InParanoid:Q23086 OMA:FERANIT NextBio:947784 Uniprot:Q23086
Length = 374
Score = 129 (50.5 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 47/185 (25%), Positives = 79/185 (42%)
Query: 11 LITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASA 70
+I G GF+ +HV + L + +I+V+D K + + N +IK
Sbjct: 5 VIVGGGGFLGAHVISALQKIGCKERIIVVDPCP--QEFKTIKIDK--SNISYIKASFLDD 60
Query: 71 DLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIH 130
++ IL ++H AA H G+ N+ GT L++ CK G +KRF++
Sbjct: 61 KVLENIL--NGASAVVHLAAVGHTGLIAGDRKSVHNFNVNGTKQLIKQCKALG-VKRFLY 117
Query: 131 VSTDEV--YGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGN 188
S+ V GE ++ + + YSA+KA AE V++ + R
Sbjct: 118 ASSVAVSFIGEPLDNVTEDDPLPDPKKYLDFYSASKAEAETYVLSQSTP-DFKTVCLRFR 176
Query: 189 NVYGP 193
+YGP
Sbjct: 177 GIYGP 181
>UNIPROTKB|Q48FN6 [details] [associations]
symbol:PSPPH_3658 "UDP-glucose 4-epimerase, putative"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=ISS]
[GO:0006012 "galactose metabolic process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:CP000058 GenomeReviews:CP000058_GR GO:GO:0003978 GO:GO:0006012
HOGENOM:HOG000167991 RefSeq:YP_275800.1 ProteinModelPortal:Q48FN6
STRING:Q48FN6 GeneID:3557056 KEGG:psp:PSPPH_3658 PATRIC:19976742
OMA:LEGWCAM ProtClustDB:CLSK458037 Uniprot:Q48FN6
Length = 326
Score = 130 (50.8 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 63/232 (27%), Positives = 107/232 (46%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDY-CSN--LKNLNPSRLSPNFKFIKGD 66
+ ITGA GF+ S V RLI + + + V + Y CS+ + ++ L+P+ ++
Sbjct: 8 VAITGATGFVGSAVVRRLI-KHTGHSVRVAVRGAYSCSSERINVVSAESLAPDNQW---- 62
Query: 67 VASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNS--FEFTKNNIYGTHVLLEACKITGQ 124
+DLV ++H AA+ HV N + E+ + N+ T L E G
Sbjct: 63 ---SDLV------TGAHVVIHCAARVHVLNETADEPDQEYFRANVTATLNLAEQAAAAG- 112
Query: 125 IKRFIHVSTDEVYGE-TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVI 183
++RFI +S+ + GE T A + P + Y +K AE + G+ V+
Sbjct: 113 VRRFIFLSSIKANGEFTHPGAPFRADDPCN--PLDAYGVSKQKAEEGLRELSARSGMQVV 170
Query: 184 TTRGNNVYGPNQFPE-KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAE 234
R VYGP K + +++ KG PLP+ G +N RS + +++A+
Sbjct: 171 IIRPVLVYGPGVKANFKSMMRWL---DKGLPLPL-GSINNRRSLVAVDNLAD 218
Score = 40 (19.1 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 563 VNIPNSMTILDELLPISVEMAKRN 586
V+I + T+LD P+S+E A ++
Sbjct: 291 VDISKTCTMLDWHPPVSIEHAMQD 314
>UNIPROTKB|Q5QP01 [details] [associations]
symbol:HSD3B2 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase type 2" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
HOGENOM:HOG000167989 HOVERGEN:HBG000014 OrthoDB:EOG4K3KWG
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
EMBL:AL359553 UniGene:Hs.654399 HGNC:HGNC:5218 GO:GO:0016853
IPI:IPI00642070 SMR:Q5QP01 STRING:Q5QP01 Ensembl:ENST00000433745
Uniprot:Q5QP01
Length = 195
Score = 121 (47.7 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 49/170 (28%), Positives = 76/170 (44%)
Query: 11 LITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKF--IKGDVA 68
L+TGA G + + L+ +I LDK + L+ S+L K ++GD+
Sbjct: 6 LVTGAGGLLGQRIVRLLVEEKELKEIRALDKA-FRPELRE-EFSKLQNRTKLTVLEGDIL 63
Query: 69 SADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSF-EFTKN-NIYGTHVLLEACKITGQIK 126
+ + + ++H A V FG + E N N+ GT +LLEAC + +
Sbjct: 64 DEPFLK--RACQDVSVVIHTACIIDV---FGVTHRESIMNVNVKGTQLLLEAC-VQASVP 117
Query: 127 RFIHVSTDEVYGETDEDAVVGN-HEASQLLPT--NPYSATKAGAEMLVMA 173
FI+ S+ EV G ++ N HE L T PY +K AE V+A
Sbjct: 118 VFIYTSSIEVAGPNSYKEIIQNGHEEEPLENTWPTPYPYSKKLAEKAVLA 167
>UNIPROTKB|Q3ZBE9 [details] [associations]
symbol:NSDHL "Sterol-4-alpha-carboxylate 3-dehydrogenase,
decarboxylating" species:9913 "Bos taurus" [GO:0060716
"labyrinthine layer blood vessel development" evidence=IEA]
[GO:0007224 "smoothened signaling pathway" evidence=IEA]
[GO:0005811 "lipid particle" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0001942 "hair follicle development"
evidence=IEA] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0006695
"cholesterol biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
UniPathway:UPA00770 InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0005783 GO:GO:0016021 eggNOG:COG0451
HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GeneTree:ENSGT00550000074557 OMA:IQLQPTF GO:GO:0005811
GO:GO:0006695 GO:GO:0001942 GO:GO:0060716 GO:GO:0007224 KO:K07748
GO:GO:0047012 EMBL:BC103389 IPI:IPI00716133 RefSeq:NP_001030559.1
UniGene:Bt.49296 ProteinModelPortal:Q3ZBE9 STRING:Q3ZBE9
PRIDE:Q3ZBE9 Ensembl:ENSBTAT00000012167 GeneID:616694
KEGG:bta:616694 CTD:50814 HOVERGEN:HBG054675 InParanoid:Q3ZBE9
OrthoDB:EOG4NKBVW NextBio:20900265 Uniprot:Q3ZBE9
Length = 356
Score = 132 (51.5 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 50/191 (26%), Positives = 86/191 (45%)
Query: 44 YCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFE 103
Y N+ ++ +P +F GD+ S ++ L + + T+ H A+ +N N
Sbjct: 45 YAVNVFDIRQGFDNPRVQFFLGDLCSQQDLYPAL--KGVSTVFHCASPPPFNN---NKEL 99
Query: 104 FTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLL-PTNPYSA 162
F + N GT ++E CK G +++ I S+ V E D G + P + Y+
Sbjct: 100 FYRVNYIGTKNVIETCKEAG-VQKLILTSSASVIFE-GVDIKNGTEDLPYATKPIDYYTE 157
Query: 163 TKAGAEMLVM-AYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGS 221
TK E V+ A+ R + ++GP P+ L+P I A KGK + G+G
Sbjct: 158 TKILQERAVLGAHDPEKNFLTTAIRPHGIFGPRD-PQ-LVPILIEAAKKGKMKFMIGNGK 215
Query: 222 NVRSYLYCEDV 232
N+ + + E+V
Sbjct: 216 NLVDFTFVENV 226
Score = 39 (18.8 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 8/29 (27%), Positives = 18/29 (62%)
Query: 291 YFLDVQKLKQL-GWYERVTWEEGLQKTMK 318
++ +K K+L G+ VT ++ + KT++
Sbjct: 319 HYYSCEKAKKLMGYRPLVTMDDAVDKTVR 347
>TAIR|locus:2155036 [details] [associations]
symbol:GMD1 ""GDP-D-mannose 4,6-dehydratase 1""
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=ISM] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=IEA;ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005622 EMBL:AB022211 GO:GO:0019673
GO:GO:0042351 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 EMBL:AF195140
IPI:IPI00517362 RefSeq:NP_201429.1 UniGene:At.46822
ProteinModelPortal:Q9SNY3 SMR:Q9SNY3 IntAct:Q9SNY3 STRING:Q9SNY3
PaxDb:Q9SNY3 PRIDE:Q9SNY3 EnsemblPlants:AT5G66280.1 GeneID:836760
KEGG:ath:AT5G66280 TAIR:At5g66280 InParanoid:Q9SNY3
PhylomeDB:Q9SNY3 ProtClustDB:PLN02653 Genevestigator:Q9SNY3
GermOnline:AT5G66280 Uniprot:Q9SNY3
Length = 361
Score = 128 (50.1 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 79/334 (23%), Positives = 136/334 (40%)
Query: 4 VYTPKNI-LITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPN--- 59
+ P+ I L+TG G S++ L+ Y++ L + N + LN + P+
Sbjct: 12 IVKPRKIALVTGITGQDGSYLTEFLLEK--GYEVHGLIRRSSNFNTQRLNHIYVDPHNVN 69
Query: 60 ---FKFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIY-GTHVL 115
K GD++ A + L K D + + AAQ+HV SF ++T + + G L
Sbjct: 70 KALMKLHYGDLSDASSLRRWLDVIKPDEVYNLAAQSHVAVSFEIP-DYTADVVATGALRL 128
Query: 116 LEACKI----TGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 171
LEA + G+ ++ + E++G T E + P +PY+A+K A
Sbjct: 129 LEAVRSHNIDNGRAIKYYQAGSSEMFGSTPPP----QSETTPFHPRSPYAASKCAAHWYT 184
Query: 172 MAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIH-----GDGSNVRSY 226
+ Y +YGL N P + E + + I A+ + + G+ R +
Sbjct: 185 VNYREAYGLYACNGILFNHESPRR-GENFVTRKITRALGRIKVGLQTKLFLGNIQASRDW 243
Query: 227 LYCEDVAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVEN--R 284
+ D EA +L + E Y + T++ V + LN ++ + R
Sbjct: 244 GFAGDYVEAMWLMLQQ-EKPDDYVVATEESHTVKEFLDVSFGYVGLNWKDHVEIDKRYFR 302
Query: 285 PFNDQRYFLDVQKLKQ-LGWYERVTWEEGLQKTM 317
P D K K+ LGW +V +E+ L K M
Sbjct: 303 PTEVDNLKGDASKAKEMLGWKPKVGFEK-LVKMM 335
>UNIPROTKB|Q4K8N4 [details] [associations]
symbol:wbpV "Putative UDP-glucose 4-epimerase WbpV"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISS] [GO:0006012
"galactose metabolic process" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0044237 GO:GO:0003978 GO:GO:0006012
HOGENOM:HOG000167991 RefSeq:YP_261399.1 ProteinModelPortal:Q4K8N4
STRING:Q4K8N4 GeneID:3481462 KEGG:pfl:PFL_4307 PATRIC:19878034
OMA:RRFVFIS BioCyc:PFLU220664:GIX8-4342-MONOMER Uniprot:Q4K8N4
Length = 320
Score = 127 (49.8 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 76/332 (22%), Positives = 139/332 (41%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
IL+TGA+GF+ V + + + +K+ V+ + + L + + I G
Sbjct: 4 ILLTGASGFVGGAV-HECLSKHSPHKLTVVVR----KPIPALAATTSVTQVEQIDG---- 54
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHV--DNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
L + + + ++H AA+ HV ++S F K N+ GT L G + R
Sbjct: 55 --LTDWSSILLDCNVVVHAAARVHVMHESSLDPLEAFRKVNVEGTLNLARQAAQRG-VGR 111
Query: 128 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 187
F+ +S+ +V GE V + + PT+PY +K AE + G+ V+ R
Sbjct: 112 FVFISSIKVNGEGTPLNVPYTAD-DEPAPTDPYGISKMEAEKGLTLIASQTGMEVVIIRP 170
Query: 188 NNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTIL-HKGEVG 246
VYGP + KG PLP G N RS + +++ + T + H
Sbjct: 171 VLVYGPGVKANFF--NMMRWLYKGIPLPF-GAIDNRRSLVALDNLVDLIVTCIDHPLAAN 227
Query: 247 HVYNIG-------TKKERRVIDVATDICKLFSLNPDTQIKF---VENRPFNDQRYF---- 292
V+ + T+ +R+ +L ++ P + F + + QR
Sbjct: 228 QVFLVSDGEDLSTTELLKRMGGALGKPARLLAI-PSGILSFSAALLAKKSISQRLCGSLQ 286
Query: 293 LDVQKLKQL-GWYERVTWEEGLQKTMKWYISN 323
+D+ K ++L GW ++ ++ L T K++I +
Sbjct: 287 VDISKNRELLGWAPPLSVDKALDATAKYFIDS 318
>UNIPROTKB|Q5HTY4 [details] [associations]
symbol:pglF "General glycosylation pathway protein"
species:195099 "Campylobacter jejuni RM1221" [GO:0006487 "protein
N-linked glycosylation" evidence=IMP] [GO:0016757 "transferase
activity, transferring glycosyl groups" evidence=IMP]
InterPro:IPR003869 Pfam:PF02719 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006487 GO:GO:0016757 EMBL:CP000025
GenomeReviews:CP000025_GR eggNOG:COG1086 HOGENOM:HOG000257078
PIR:C81316 RefSeq:YP_179251.1 ProteinModelPortal:Q5HTY4
STRING:Q5HTY4 GeneID:3231770 KEGG:cjr:CJE1263 PATRIC:20044322
KO:K15912 OMA:PFPRSVI ProtClustDB:CLSK879094
BioCyc:CJEJ195099:GJC0-1289-MONOMER Uniprot:Q5HTY4
Length = 590
Score = 131 (51.2 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 42/145 (28%), Positives = 71/145 (48%)
Query: 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDY----CSNLKNLNPSRL 56
+A K +L++GA G I S +C + I + ++++D +Y ++ NL ++
Sbjct: 265 VAAFLKDKVVLVSGAGGTIGSELCKQCI-KFGAKHLIMVDHSEYNLYKINDDLNLYKEKI 323
Query: 57 SPNFKFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLL 116
+P I D S D V L T K + I+H AA HV N NNI GT +L
Sbjct: 324 TPILLSIL-DKQSLDEV---LKTYKPELILHAAAYKHVPLCEQNPHSAVINNILGTKILC 379
Query: 117 EACKITGQIKRFIHVSTDEVYGETD 141
++ K ++ +F+ +STD+ T+
Sbjct: 380 DSAK-ENKVAKFVMISTDKAVRPTN 403
>TIGR_CMR|CJE_1263 [details] [associations]
symbol:CJE_1263 "general glycosylation pathway protein"
species:195099 "Campylobacter jejuni RM1221" [GO:0006487 "protein
N-linked glycosylation" evidence=IMP] [GO:0016757 "transferase
activity, transferring glycosyl groups" evidence=IMP]
InterPro:IPR003869 Pfam:PF02719 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006487 GO:GO:0016757 EMBL:CP000025
GenomeReviews:CP000025_GR eggNOG:COG1086 HOGENOM:HOG000257078
PIR:C81316 RefSeq:YP_179251.1 ProteinModelPortal:Q5HTY4
STRING:Q5HTY4 GeneID:3231770 KEGG:cjr:CJE1263 PATRIC:20044322
KO:K15912 OMA:PFPRSVI ProtClustDB:CLSK879094
BioCyc:CJEJ195099:GJC0-1289-MONOMER Uniprot:Q5HTY4
Length = 590
Score = 131 (51.2 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 42/145 (28%), Positives = 71/145 (48%)
Query: 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDY----CSNLKNLNPSRL 56
+A K +L++GA G I S +C + I + ++++D +Y ++ NL ++
Sbjct: 265 VAAFLKDKVVLVSGAGGTIGSELCKQCI-KFGAKHLIMVDHSEYNLYKINDDLNLYKEKI 323
Query: 57 SPNFKFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLL 116
+P I D S D V L T K + I+H AA HV N NNI GT +L
Sbjct: 324 TPILLSIL-DKQSLDEV---LKTYKPELILHAAAYKHVPLCEQNPHSAVINNILGTKILC 379
Query: 117 EACKITGQIKRFIHVSTDEVYGETD 141
++ K ++ +F+ +STD+ T+
Sbjct: 380 DSAK-ENKVAKFVMISTDKAVRPTN 403
>TIGR_CMR|CPS_2092 [details] [associations]
symbol:CPS_2092 "polysaccharide biosynthesis protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR003869 Pfam:PF02719
InterPro:IPR016040 GO:GO:0009058 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG1086
RefSeq:YP_268819.1 ProteinModelPortal:Q483E8 SMR:Q483E8
STRING:Q483E8 GeneID:3520969 KEGG:cps:CPS_2092 PATRIC:21467297
HOGENOM:HOG000257079 OMA:ICIHAAA ProtClustDB:CLSK825821
BioCyc:CPSY167879:GI48-2162-MONOMER InterPro:IPR020025
TIGRFAMs:TIGR03589 Uniprot:Q483E8
Length = 337
Score = 126 (49.4 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 37/130 (28%), Positives = 57/130 (43%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYC--SNLKNLNPSRLSPNFKFIKG 65
K +LITG G ++ YP+ K +++ D S +K P P +F G
Sbjct: 5 KVVLITGGTGSFGKKFIETILDRYPDVKKIIIFSRDELKQSIIKQKYPEYDFPQLRFFIG 64
Query: 66 DVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQI 125
DV D E +D I+H AA VD + N E + N+ G ++ A G +
Sbjct: 65 DVR--DRSRITQACEGVDVIIHAAAIKQVDTAEYNPTECIRTNVDGAENVIHAALACG-V 121
Query: 126 KRFIHVSTDE 135
K + +STD+
Sbjct: 122 KDVVALSTDK 131
Score = 44 (20.5 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 40/136 (29%), Positives = 54/136 (39%)
Query: 156 PTNPYSATKAGAEMLVMAYGRSYGLPVI---TTRGNNVYGPNQFPEKLIPKFILLAMKGK 212
P N Y ATK ++ L A G I R NV G +IP FI +G
Sbjct: 135 PINLYGATKLVSDKLFAAANNIRGSKDIKFSAVRYGNVMGSRG---SVIPFFIDKKKEGI 191
Query: 213 PLPI-HGDGSNVRSYLYCEDVAEAFDTILHK--GEVGHVYNIGTKKERRVIDVATDICKL 269
LPI H + + L + V I H GE+ + I + K + D+AT I
Sbjct: 192 -LPITHMEMTRFNISLQ-DGVNMVMYAIEHHLGGEI-FIPKIPSYK---ITDIATAIA-- 243
Query: 270 FSLNPDTQIKFVENRP 285
PD + + V RP
Sbjct: 244 ----PDCETRDVGIRP 255
>UNIPROTKB|Q15738 [details] [associations]
symbol:NSDHL "Sterol-4-alpha-carboxylate 3-dehydrogenase,
decarboxylating" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0047012 "sterol-4-alpha-carboxylate 3-dehydrogenase
(decarboxylating) activity" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0007224 "smoothened
signaling pathway" evidence=IEA] [GO:0060716 "labyrinthine layer
blood vessel development" evidence=IEA] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=TAS] [GO:0006695 "cholesterol biosynthetic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] UniPathway:UPA00770 Reactome:REACT_111217
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 DrugBank:DB00157 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789 OMA:IQLQPTF
GO:GO:0005811 GO:GO:0006695 GO:GO:0001942 GO:GO:0060716
GO:GO:0007224 EMBL:CH471172 EMBL:U82671 KO:K07748 GO:GO:0047012
CTD:50814 HOVERGEN:HBG054675 OrthoDB:EOG4NKBVW EMBL:U47105
EMBL:BC000245 EMBL:BC007816 IPI:IPI00019407 RefSeq:NP_001123237.1
RefSeq:NP_057006.1 UniGene:Hs.57698 ProteinModelPortal:Q15738
SMR:Q15738 IntAct:Q15738 STRING:Q15738 PhosphoSite:Q15738
DMDM:8488997 REPRODUCTION-2DPAGE:Q15738 PaxDb:Q15738
PeptideAtlas:Q15738 PRIDE:Q15738 DNASU:50814
Ensembl:ENST00000370274 Ensembl:ENST00000440023 GeneID:50814
KEGG:hsa:50814 UCSC:uc004fgs.1 GeneCards:GC0XP151999
HGNC:HGNC:13398 HPA:HPA000248 HPA:HPA000571 MIM:300275 MIM:300831
MIM:308050 neXtProt:NX_Q15738 Orphanet:139 Orphanet:251383
PharmGKB:PA134959020 InParanoid:Q15738 PhylomeDB:Q15738
BioCyc:MetaCyc:HS07423-MONOMER GenomeRNAi:50814 NextBio:53261
ArrayExpress:Q15738 Bgee:Q15738 CleanEx:HS_NSDHL
Genevestigator:Q15738 GermOnline:ENSG00000147383 Uniprot:Q15738
Length = 373
Score = 128 (50.1 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 49/191 (25%), Positives = 85/191 (44%)
Query: 44 YCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFE 103
Y N+ ++ +P +F GD+ S ++ L + ++T+ H A+ N N
Sbjct: 62 YAVNVFDIQQGFDNPQVRFFLGDLCSRQDLYPAL--KGVNTVFHCASPPPSSN---NKEL 116
Query: 104 FTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLL-PTNPYSA 162
F + N GT ++E CK G +++ I S+ V E D G + + P + Y+
Sbjct: 117 FYRVNYIGTKNVIETCKEAG-VQKLILTSSASVIFE-GVDIKNGTEDLPYAMKPIDYYTE 174
Query: 163 TKAGAEMLVM-AYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGS 221
TK E V+ A R + ++GP P+ L+P I A GK + G+G
Sbjct: 175 TKILQERAVLGANDPEKNFLTTAIRPHGIFGPRD-PQ-LVPILIEAARNGKMKFVIGNGK 232
Query: 222 NVRSYLYCEDV 232
N+ + + E+V
Sbjct: 233 NLVDFTFVENV 243
>ZFIN|ZDB-GENE-030828-2 [details] [associations]
symbol:hsd3b2 "hydroxy-delta-5-steroid dehydrogenase,
3 beta- and steroid delta-isomerase 2" species:7955 "Danio rerio"
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA;IMP] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016853 "isomerase activity"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
ZFIN:ZDB-GENE-030828-2 CTD:3283 HOVERGEN:HBG000014 KO:K00070
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
EMBL:AY279108 IPI:IPI00500056 RefSeq:NP_997962.1 UniGene:Dr.119436
ProteinModelPortal:Q7ZZC3 STRING:Q7ZZC3 GeneID:373131
KEGG:dre:373131 InParanoid:Q7ZZC3 NextBio:20813390
ArrayExpress:Q7ZZC3 Uniprot:Q7ZZC3
Length = 374
Score = 120 (47.3 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 49/191 (25%), Positives = 81/191 (42%)
Query: 11 LITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASA 70
++TGA GF+ + L+ +I +LD+ ++ L R I+GD+
Sbjct: 9 VVTGACGFLGEKLVRLLLEEENLSEIRLLDRNIRSELIQTLEDGRGETKVSVIEGDIRDR 68
Query: 71 DLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIH 130
+L+ + + H A+ + + S E N+ T +LLE C I + FI+
Sbjct: 69 ELLR--RACKGATLVFHTASLIDYNGAVEYS-ELHAVNVKATRLLLETC-IQQSVSSFIY 124
Query: 131 VSTDEVY-GETDEDAVVGNHEASQL--LPTNPYSATKAGAEMLVM-AYG---RSYG-LPV 182
S+ EV + ++ HE + P + YS TK AE + + A G R G L
Sbjct: 125 TSSIEVACPNRSGEPIINGHEDTPYSSYPISNYSKTKQEAEQICLQANGELLRDGGHLAT 184
Query: 183 ITTRGNNVYGP 193
R +YGP
Sbjct: 185 CALRPMFIYGP 195
Score = 52 (23.4 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 13/46 (28%), Positives = 21/46 (45%)
Query: 277 QIKFVENRPFNDQRYFLDVQKLKQLGWYERVTWEEGLQKTMKWYIS 322
Q+ + N PF+ F + ++ G+ R WEE + T W S
Sbjct: 321 QLVTMVNTPFS----FSYQKACREFGYSPRYDWEEARRSTTDWLAS 362
>UNIPROTKB|P26439 [details] [associations]
symbol:HSD3B2 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase type 2" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=NAS] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IDA] [GO:0006694 "steroid
biosynthetic process" evidence=IDA] [GO:0004769 "steroid
delta-isomerase activity" evidence=IDA] [GO:0030868 "smooth
endoplasmic reticulum membrane" evidence=ISS] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0005758
"mitochondrial intermembrane space" evidence=ISS] [GO:0031966
"mitochondrial membrane" evidence=NAS] [GO:0005783 "endoplasmic
reticulum" evidence=NAS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=TAS] [GO:0006702 "androgen biosynthetic process"
evidence=TAS] [GO:0006704 "glucocorticoid biosynthetic process"
evidence=TAS] [GO:0006705 "mineralocorticoid biosynthetic process"
evidence=TAS] [GO:0008202 "steroid metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
Reactome:REACT_111217 InterPro:IPR002225 Pfam:PF01073
UniPathway:UPA00062 InterPro:IPR016040 GO:GO:0016021 eggNOG:COG0451
HOVERGEN:HBG000014 KO:K00070 BRENDA:1.1.1.145 Reactome:REACT_15493
DrugBank:DB00157 DrugBank:DB01108 GO:GO:0005743 GO:GO:0005758
GO:GO:0030868 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
GO:GO:0006702 GO:GO:0006704 GO:GO:0006705 GO:GO:0044281
Gene3D:3.40.50.720 OMA:WVFPRIA EMBL:M77144 EMBL:M67466
EMBL:CR627415 EMBL:AK222997 EMBL:AL359553 EMBL:CH471122
EMBL:BC038419 EMBL:BC131488 EMBL:S80140 EMBL:S60309 EMBL:S60310
IPI:IPI00218494 IPI:IPI00465001 PIR:A39488 RefSeq:NP_000189.1
RefSeq:NP_001159592.1 UniGene:Hs.654399 ProteinModelPortal:P26439
SMR:P26439 STRING:P26439 PhosphoSite:P26439 DMDM:112770
PRIDE:P26439 DNASU:3284 Ensembl:ENST00000369416
Ensembl:ENST00000543831 GeneID:3284 KEGG:hsa:3284 UCSC:uc001ehs.3
UCSC:uc001ehu.3 CTD:3284 GeneCards:GC01P119957 HGNC:HGNC:5218
MIM:201810 MIM:613890 neXtProt:NX_P26439 Orphanet:90791
Orphanet:1331 Orphanet:3185 PharmGKB:PA29487 InParanoid:P26439
PhylomeDB:P26439 BioCyc:MetaCyc:HS10943-MONOMER BindingDB:P26439
ChEMBL:CHEMBL3670 GenomeRNAi:3284 NextBio:13035 ArrayExpress:P26439
Bgee:P26439 CleanEx:HS_HSD3B2 Genevestigator:P26439
GermOnline:ENSG00000203859 Uniprot:P26439
Length = 372
Score = 121 (47.7 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 49/170 (28%), Positives = 76/170 (44%)
Query: 11 LITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKF--IKGDVA 68
L+TGA G + + L+ +I LDK + L+ S+L K ++GD+
Sbjct: 6 LVTGAGGLLGQRIVRLLVEEKELKEIRALDKA-FRPELRE-EFSKLQNRTKLTVLEGDIL 63
Query: 69 SADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSF-EFTKN-NIYGTHVLLEACKITGQIK 126
+ + + ++H A V FG + E N N+ GT +LLEAC + +
Sbjct: 64 DEPFLK--RACQDVSVVIHTACIIDV---FGVTHRESIMNVNVKGTQLLLEAC-VQASVP 117
Query: 127 RFIHVSTDEVYGETDEDAVVGN-HEASQLLPT--NPYSATKAGAEMLVMA 173
FI+ S+ EV G ++ N HE L T PY +K AE V+A
Sbjct: 118 VFIYTSSIEVAGPNSYKEIIQNGHEEEPLENTWPTPYPYSKKLAEKAVLA 167
Score = 50 (22.7 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 299 KQLGWYERVTWEEGLQKTMKW 319
+ L + +WEE QKT++W
Sbjct: 335 RDLAYKPLYSWEEAKQKTVEW 355
>DICTYBASE|DDB_G0280135 [details] [associations]
symbol:DDB_G0280135 "methionine adenosyltransferase
regulatory beta subunit" species:44689 "Dictyostelium discoideum"
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IEA] [GO:0008831 "dTDP-4-dehydrorhamnose reductase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0048270 "methionine adenosyltransferase regulator
activity" evidence=ISS] [GO:0048269 "methionine adenosyltransferase
complex" evidence=ISS] [GO:0006556 "S-adenosylmethionine
biosynthetic process" evidence=ISS] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR005913 Pfam:PF04321 InterPro:IPR016040
dictyBase:DDB_G0280135 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0016740 EMBL:AAFI02000035 eggNOG:COG1091 OMA:MTKYQML
GO:GO:0048269 GO:GO:0008831 GO:GO:0048270 GO:GO:0045226
GO:GO:0006556 RefSeq:XP_641262.1 ProteinModelPortal:Q54VU3
STRING:Q54VU3 PRIDE:Q54VU3 EnsemblProtists:DDB0231749
GeneID:8622394 KEGG:ddi:DDB_G0280135 InParanoid:Q54VU3
Uniprot:Q54VU3
Length = 327
Score = 126 (49.4 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 70/293 (23%), Positives = 123/293 (41%)
Query: 1 MATVYTPKN-ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPN 59
M+ PK +LITGA G + + + P + + L L + K +N PN
Sbjct: 1 MSNAALPKTKVLITGATGLLGRALMK--VFTQPPLEHIKLVGLGWSRYEKYVNQF---PN 55
Query: 60 FKFIKGDVAS-ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEA 118
+ K D+ + ++L F+ K + I+H AA+ D G+ + K N+ T L+E
Sbjct: 56 -ELRKLDITNDSELSEFVN-DFKPNVIIHAAAERRPDQCEGDKEKTQKLNVGTTEKLIEL 113
Query: 119 CKITGQIKRFIHVSTDEVY-GETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVM-AYGR 176
K ++S+D V+ GE + ++ P + Y TK +E L++ A
Sbjct: 114 SKSVNAT--LFYISSDYVFDGENPPYDI-----DAKTNPLSFYGKTKEESEQLIIKASKE 166
Query: 177 SYGLPVITTRGNNVYG-PNQFPEKLIPKFILLAMKGKPL--PIHGDGSNVRSYLYC-EDV 232
S I R +YG E + +K + PI D +R Y C EDV
Sbjct: 167 SDSFKYIILRVPVLYGYVENLKECAVTAVAEQVIKARDANQPIEIDNWQIR-YPTCVEDV 225
Query: 233 AEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSL-NPDTQIKFVENR 284
A ++ + +Y+ ++ + D+A D+ + + NP + IK + +
Sbjct: 226 ARVCYELMISKQYNSIYHFSGQQMKTKYDMAIDMANVLGITNPQSIIKPINEK 278
>UNIPROTKB|F1RX12 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0070401 "NADP+ binding" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
CTD:2762 EMBL:CT961043 EMBL:CU302446 EMBL:CU682457
RefSeq:XP_003128195.3 Ensembl:ENSSSCT00000001084 GeneID:100520846
KEGG:ssc:100520846 Uniprot:F1RX12
Length = 350
Score = 131 (51.2 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 43/133 (32%), Positives = 64/133 (48%)
Query: 52 NP-SRLSPNFKFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKN-NI 109
NP + + N K GD+ + + I+ K I + AQ+HV SF + E+T + +
Sbjct: 49 NPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDG 107
Query: 110 YGTHVLLEACKITGQIK--RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 167
GT LL+A K G I RF ST E+YG+ E E + P +PY A K A
Sbjct: 108 VGTLRLLDAVKTCGLIGSVRFYQASTSELYGKVQETP---QKETTPFYPRSPYGAAKLYA 164
Query: 168 EMLVMAYGRSYGL 180
+V+ + +Y L
Sbjct: 165 YWIVVNFREAYNL 177
Score = 38 (18.4 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 16/63 (25%), Positives = 27/63 (42%)
Query: 412 EYGKGRLENRSQLLADIQNVKPTHV-FNAAGVT-GRPNVDWCETHKPETIRTNVVGTLTL 469
E G+ + R + D++ +PT V F T + ++W KP +V +
Sbjct: 283 EVGRCKESGRVHVRVDLKYYRPTEVDFLQGDCTKAKQKLNW----KPRVGFDELVREMVD 338
Query: 470 ADV 472
ADV
Sbjct: 339 ADV 341
>UNIPROTKB|Q83AP4 [details] [associations]
symbol:CBU_1837 "UDP-glucose 4-epimerase" species:227377
"Coxiella burnetii RSA 493" [GO:0003824 "catalytic activity"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 GO:GO:0003978
HOGENOM:HOG000168002 RefSeq:NP_820816.2 ProteinModelPortal:Q83AP4
PRIDE:Q83AP4 GeneID:1209749 KEGG:cbu:CBU_1837 PATRIC:17932405
OMA:RMRFDIV ProtClustDB:CLSK915066
BioCyc:CBUR227377:GJ7S-1811-MONOMER Uniprot:Q83AP4
Length = 346
Score = 126 (49.4 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 71/313 (22%), Positives = 140/313 (44%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
+ +L+TGA G+I S + +L+ Y + +D+ + S+ + +P + + I DV
Sbjct: 4 ETVLVTGAGGYIGSVLVPKLLNK--GYHVKAVDRFYFGSDKLSQHP-----HLELINEDV 56
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQ--I 125
+ L T +D ++ AA ++ D S G+ FE I +++ + Q +
Sbjct: 57 RR---LQPSLFTN-VDYVIDLAAVSN-DPS-GDIFEKATWEI-NHQARVQSATLAKQQKV 109
Query: 126 KRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSAT--KAGAEMLVMAYGRSYGLPVI 183
KR+I S+ +YG + AV E ++ P Y+ KA E+L +A + + V+
Sbjct: 110 KRYILPSSCSIYG-FQKGAV---DETAKTNPLTTYAKANEKAEKEILPLATD-DFTVTVM 164
Query: 184 TTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHK- 242
Y P + I + A + K +P+ DG+ R ++ +D + +L
Sbjct: 165 RQATVYGYSPRMRFDLAINGMVYGAWEDKCIPLMRDGTQYRPMVHVQDTTDVMVLLLQAD 224
Query: 243 -GEV-GHVYNIGTKKERRVID-VATDICKLFSLNPDTQIKFVENRPFNDQR-YFLDVQKL 298
E+ G + N+G +++ + + I ++ D +I +E D R Y++ K+
Sbjct: 225 ASEINGQIINVGCEEQNYQLQPLGQLIAEVVGQKLDEKIA-IEWYGDPDHRSYYVSFDKI 283
Query: 299 KQ-LGWYERVTWE 310
K+ L W + W+
Sbjct: 284 KRILNWQPQ--WD 294
>TIGR_CMR|CBU_1837 [details] [associations]
symbol:CBU_1837 "NAD-dependent epimerase/dehydratase
family protein, putative" species:227377 "Coxiella burnetii RSA
493" [GO:0008150 "biological_process" evidence=ND] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0044237
GO:GO:0003978 HOGENOM:HOG000168002 RefSeq:NP_820816.2
ProteinModelPortal:Q83AP4 PRIDE:Q83AP4 GeneID:1209749
KEGG:cbu:CBU_1837 PATRIC:17932405 OMA:RMRFDIV
ProtClustDB:CLSK915066 BioCyc:CBUR227377:GJ7S-1811-MONOMER
Uniprot:Q83AP4
Length = 346
Score = 126 (49.4 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 71/313 (22%), Positives = 140/313 (44%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
+ +L+TGA G+I S + +L+ Y + +D+ + S+ + +P + + I DV
Sbjct: 4 ETVLVTGAGGYIGSVLVPKLLNK--GYHVKAVDRFYFGSDKLSQHP-----HLELINEDV 56
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQ--I 125
+ L T +D ++ AA ++ D S G+ FE I +++ + Q +
Sbjct: 57 RR---LQPSLFTN-VDYVIDLAAVSN-DPS-GDIFEKATWEI-NHQARVQSATLAKQQKV 109
Query: 126 KRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSAT--KAGAEMLVMAYGRSYGLPVI 183
KR+I S+ +YG + AV E ++ P Y+ KA E+L +A + + V+
Sbjct: 110 KRYILPSSCSIYG-FQKGAV---DETAKTNPLTTYAKANEKAEKEILPLATD-DFTVTVM 164
Query: 184 TTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHK- 242
Y P + I + A + K +P+ DG+ R ++ +D + +L
Sbjct: 165 RQATVYGYSPRMRFDLAINGMVYGAWEDKCIPLMRDGTQYRPMVHVQDTTDVMVLLLQAD 224
Query: 243 -GEV-GHVYNIGTKKERRVID-VATDICKLFSLNPDTQIKFVENRPFNDQR-YFLDVQKL 298
E+ G + N+G +++ + + I ++ D +I +E D R Y++ K+
Sbjct: 225 ASEINGQIINVGCEEQNYQLQPLGQLIAEVVGQKLDEKIA-IEWYGDPDHRSYYVSFDKI 283
Query: 299 KQ-LGWYERVTWE 310
K+ L W + W+
Sbjct: 284 KRILNWQPQ--WD 294
>RGD|1308481 [details] [associations]
symbol:Sdr42e1 "short chain dehydrogenase/reductase family 42E,
member 1" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 RGD:1308481 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 OrthoDB:EOG40ZQZ0 IPI:IPI00768842
Ensembl:ENSRNOT00000030725 UCSC:RGD:1308481 Uniprot:D3ZZI8
Length = 278
Score = 124 (48.7 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 57/257 (22%), Positives = 114/257 (44%)
Query: 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIK 64
+ + +LITG G+ + L N ++++ D ++ NL P ++ F++
Sbjct: 6 FPEETVLITGGGGYFGFRLGCAL--NQKGVRVILFDIIEPAQNL----PEGIT----FVR 55
Query: 65 GDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQ 124
GD+ V I + H A+ N + N+ GT +L+AC G
Sbjct: 56 GDIRCLSDVEAAFQDADIACVFHIASYGMSGREQLNKTRIEEVNVGGTENILQACLGRG- 114
Query: 125 IKRFIHVST-DEVYGETDEDAVVGNHEASQLLPTN--P--YSATKAGAEMLVM-AYGRSY 178
+ ++ ST + ++G + E+ LP + P YS TK+ AE V+ A G ++
Sbjct: 115 VPSLVYTSTFNVIFGG---QVIRNGDESLPYLPLHLHPDHYSRTKSIAEKKVLEANGLAF 171
Query: 179 --GLPVITT---RGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVA 233
G V+ T R +YG + ++ +P+ + +G ++GD ++ +++ +++A
Sbjct: 172 KQGDGVLRTCAIRPAGIYGAGE--QRHLPRVVSYIERGLFRFVYGDPQSLVEFVHVDNLA 229
Query: 234 EAFDTILH--KGEVGHV 248
+A K + GH+
Sbjct: 230 KAHILASEALKADKGHI 246
>MGI|MGI:1099438 [details] [associations]
symbol:Nsdhl "NAD(P) dependent steroid dehydrogenase-like"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IMP]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0005811 "lipid particle" evidence=ISO]
[GO:0006629 "lipid metabolic process" evidence=IEA] [GO:0006694
"steroid biosynthetic process" evidence=IEA] [GO:0006695
"cholesterol biosynthetic process" evidence=IEA] [GO:0007224
"smoothened signaling pathway" evidence=IGI] [GO:0008202 "steroid
metabolic process" evidence=IEA] [GO:0008203 "cholesterol metabolic
process" evidence=IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016126
"sterol biosynthetic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0060716
"labyrinthine layer blood vessel development" evidence=IMP]
UniPathway:UPA00770 InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 MGI:MGI:1099438 GO:GO:0005783 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GeneTree:ENSGT00550000074557 GO:GO:0005811
GO:GO:0008203 GO:GO:0006695 GO:GO:0001942 GO:GO:0060716
GO:GO:0007224 EMBL:AL021127 KO:K07748 GO:GO:0047012 CTD:50814
HOVERGEN:HBG054675 OrthoDB:EOG4NKBVW EMBL:AF100198 IPI:IPI00128692
RefSeq:NP_035071.3 UniGene:Mm.38792 ProteinModelPortal:Q9R1J0
SMR:Q9R1J0 STRING:Q9R1J0 PhosphoSite:Q9R1J0 PaxDb:Q9R1J0
PRIDE:Q9R1J0 Ensembl:ENSMUST00000033715 GeneID:18194 KEGG:mmu:18194
InParanoid:Q9R1J0 ChiTaRS:NSDHL NextBio:293544 Bgee:Q9R1J0
CleanEx:MM_NSDHL Genevestigator:Q9R1J0
GermOnline:ENSMUSG00000031349 Uniprot:Q9R1J0
Length = 362
Score = 126 (49.4 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 48/191 (25%), Positives = 86/191 (45%)
Query: 44 YCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFE 103
Y N+ +++ +P +F GD+ + ++ L + + T+ H A+ N N
Sbjct: 51 YTVNVFDIHQGFDNPRVQFFIGDLCNQQDLYPAL--KGVSTVFHCASPPPYSN---NKEL 105
Query: 104 FTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLL-PTNPYSA 162
F + N GT ++E C+ G +++ I S+ V E D G + + P + Y+
Sbjct: 106 FYRVNFIGTKTVIETCREAG-VQKLILTSSASVVFE-GVDIKNGTEDLPYAMKPIDYYTE 163
Query: 163 TKAGAEMLVM-AYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGS 221
TK E V+ A R + ++GP P+ L+P I A KGK + G+G
Sbjct: 164 TKILQERAVLDANDPKKNFLTAAIRPHGIFGPRD-PQ-LVPILIDAARKGKMKFMIGNGE 221
Query: 222 NVRSYLYCEDV 232
N+ + + E+V
Sbjct: 222 NLVDFTFVENV 232
>RGD|1359337 [details] [associations]
symbol:Nsdhl "NAD(P) dependent steroid dehydrogenase-like"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001942 "hair follicle development"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISO] [GO:0005811
"lipid particle" evidence=IEA;ISO] [GO:0006695 "cholesterol
biosynthetic process" evidence=IEA] [GO:0007224 "smoothened
signaling pathway" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008203 "cholesterol
metabolic process" evidence=ISO] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IEA]
[GO:0060716 "labyrinthine layer blood vessel development"
evidence=IEA;ISO] UniPathway:UPA00770 InterPro:IPR002225
Pfam:PF01073 InterPro:IPR016040 RGD:1359337 GO:GO:0005783
GO:GO:0016021 eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GeneTree:ENSGT00550000074557
OMA:IQLQPTF GO:GO:0005811 GO:GO:0006695 GO:GO:0001942 GO:GO:0060716
GO:GO:0007224 KO:K07748 GO:GO:0047012 CTD:50814 HOVERGEN:HBG054675
OrthoDB:EOG4NKBVW EMBL:BC087626 IPI:IPI00360954
RefSeq:NP_001009399.1 UniGene:Rn.23620 ProteinModelPortal:Q5PPL3
STRING:Q5PPL3 PRIDE:Q5PPL3 Ensembl:ENSRNOT00000022985 GeneID:309262
KEGG:rno:309262 InParanoid:Q5PPL3 SABIO-RK:Q5PPL3 NextBio:660517
Genevestigator:Q5PPL3 Uniprot:Q5PPL3
Length = 362
Score = 126 (49.4 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 50/191 (26%), Positives = 86/191 (45%)
Query: 44 YCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFE 103
Y N+ ++ +P +F GD+ + ++ L + + T+ H A+ NS N
Sbjct: 51 YAVNVFDVRQGFDNPRVQFFIGDLCNQQDLYPAL--KGVSTVFHCASPP--SNS-NNKEL 105
Query: 104 FTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLL-PTNPYSA 162
F + N GT ++E CK G +++ I S+ V E D G + + P + Y+
Sbjct: 106 FYRVNSTGTKTVIETCKEAG-VQKLILTSSASVVFE-GVDIKNGTEDLPYAMKPIDYYTE 163
Query: 163 TKAGAEMLVM-AYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGS 221
TK E V+ A R + ++GP P+ L+P I A KGK + G+G
Sbjct: 164 TKILQERAVLDANDPKKNFLTAAIRPHGIFGPRD-PQ-LVPVLIDAARKGKMKFMIGNGK 221
Query: 222 NVRSYLYCEDV 232
N+ + + E+V
Sbjct: 222 NLVDFTFVENV 232
>ZFIN|ZDB-GENE-050419-45 [details] [associations]
symbol:gmds "GDP-mannose 4,6-dehydratase"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0019673 "GDP-mannose metabolic
process" evidence=IEA;ISS] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;ISS] [GO:0008417 "fucosyltransferase activity"
evidence=IMP] [GO:0007219 "Notch signaling pathway" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0036065
"fucosylation" evidence=IMP] [GO:0021744 "dorsal motor nucleus of
vagus nerve development" evidence=IMP] [GO:0021564 "vagus nerve
development" evidence=IMP] [GO:0042351 "'de novo' GDP-L-fucose
biosynthetic process" evidence=ISS] [GO:0070401 "NADP+ binding"
evidence=ISS] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 ZFIN:ZDB-GENE-050419-45 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0007219 GO:GO:0005622
GO:GO:0010842 GO:GO:0019673 GO:GO:0008417 EMBL:BX510653 KO:K01711
OMA:INPKYFR GO:GO:0008446 TIGRFAMs:TIGR01472
GeneTree:ENSGT00440000033640 CTD:2762 GO:GO:0021744 GO:GO:0021564
EMBL:BX678772 IPI:IPI00650926 RefSeq:NP_956783.3 UniGene:Dr.26662
Ensembl:ENSDART00000103234 GeneID:393461 KEGG:dre:393461
ArrayExpress:F1QPT3 Bgee:F1QPT3 Uniprot:F1QPT3
Length = 377
Score = 122 (48.0 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 51/193 (26%), Positives = 86/193 (44%)
Query: 59 NFKFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVLLE 117
+ K GD+ + + I+ K I + AQ+HV SF + E+T + + GT LL+
Sbjct: 84 HMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDGVGTLRLLD 142
Query: 118 ACKITG--QIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYG 175
A K G RF ST E+YG+ E + E + P +PY A K A +V+ +
Sbjct: 143 AVKTCGLTDTVRFYQASTSELYGKVQE---IPQKETTPFYPRSPYGAAKLYAYWIVINFR 199
Query: 176 RSYGLPVITTRGNNVYGPNQ---FPEKLIPKFILLAMKGKPLPIH-GDGSNVRSYLYCED 231
+Y L + N P + F + I + + G+ G+ ++R + + +D
Sbjct: 200 EAYNLFAVNGILFNHESPRRGSNFVTRKISRSVAKIHLGQLECFSLGNLDSMRDWGHAKD 259
Query: 232 VAEAFDTILHKGE 244
EA +L + E
Sbjct: 260 YVEAMWLMLQQEE 272
Score = 48 (22.0 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 12/19 (63%), Positives = 13/19 (68%)
Query: 299 KQLGWYERVTWEEGLQKTM 317
K LGW RVT+EE L K M
Sbjct: 346 KVLGWKPRVTFEE-LVKEM 363
WARNING: HSPs involving 29 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.136 0.409 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 676 676 0.00078 121 3 11 22 0.41 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 279
No. of states in DFA: 622 (66 KB)
Total size of DFA: 373 KB (2184 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 57.03u 0.15s 57.18t Elapsed: 00:00:03
Total cpu time: 57.10u 0.15s 57.25t Elapsed: 00:00:04
Start: Fri May 10 08:44:59 2013 End: Fri May 10 08:45:03 2013
WARNINGS ISSUED: 2