Query 005824
Match_columns 675
No_of_seqs 464 out of 2299
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 08:26:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005824.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005824hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yuw_A Heat shock cognate 71 k 100.0 6.3E-64 2.2E-68 558.6 44.1 404 1-408 1-404 (554)
2 3d2f_A Heat shock protein homo 100.0 1.9E-63 6.5E-68 563.3 44.3 398 8-408 3-405 (675)
3 4b9q_A Chaperone protein DNAK; 100.0 1.4E-61 4.7E-66 544.7 45.4 391 8-408 3-402 (605)
4 3i33_A Heat shock-related 70 k 100.0 9.8E-60 3.3E-64 509.0 45.9 380 6-386 22-403 (404)
5 2kho_A Heat shock protein 70; 100.0 5.6E-61 1.9E-65 539.8 35.8 391 8-408 3-402 (605)
6 3qfu_A 78 kDa glucose-regulate 100.0 1.9E-58 6.5E-63 497.6 45.2 376 8-385 19-394 (394)
7 4gni_A Putative heat shock pro 100.0 5.9E-57 2E-61 487.7 42.9 377 7-386 13-403 (409)
8 2v7y_A Chaperone protein DNAK; 100.0 2.4E-56 8.4E-61 493.8 40.3 365 8-408 3-371 (509)
9 1dkg_D Molecular chaperone DNA 100.0 1.5E-55 5.1E-60 472.8 40.7 371 8-384 3-382 (383)
10 1jce_A ROD shape-determining p 100.0 1.1E-38 3.6E-43 336.7 23.3 309 8-385 4-327 (344)
11 2fsj_A Hypothetical protein TA 99.9 1.3E-27 4.6E-32 250.6 10.6 229 119-382 96-343 (346)
12 2ych_A Competence protein PILM 99.9 2.8E-27 9.4E-32 252.6 11.0 320 8-382 14-373 (377)
13 3h1q_A Ethanolamine utilizatio 99.9 1E-25 3.4E-30 229.3 21.8 203 121-381 70-272 (272)
14 4a2a_A Cell division protein F 99.9 5.2E-27 1.8E-31 251.2 11.1 200 156-384 167-394 (419)
15 1k8k_A ARP3, actin-like protei 99.9 2.7E-25 9.1E-30 240.3 17.9 227 143-382 107-386 (418)
16 2fxu_A Alpha-actin-1, actin, a 99.9 9.1E-25 3.1E-29 232.3 15.0 297 8-382 6-348 (375)
17 2zgy_A Plasmid segregation pro 99.9 1.9E-22 6.4E-27 209.8 9.0 227 117-381 73-319 (320)
18 1k8k_B ARP2, actin-like protei 99.8 2.7E-21 9.2E-26 206.6 4.4 213 145-382 106-363 (394)
19 3js6_A Uncharacterized PARM pr 99.8 6.3E-18 2.2E-22 177.0 15.8 207 144-386 114-339 (355)
20 4ehu_A Activator of 2-hydroxyi 99.7 1.2E-16 4E-21 162.4 19.1 182 169-385 69-256 (276)
21 4apw_A ALP12; actin-like prote 99.7 3.4E-18 1.1E-22 177.7 1.7 203 144-384 106-325 (329)
22 3dwl_A Actin-related protein 3 99.7 5.1E-17 1.8E-21 173.9 8.5 223 144-382 124-395 (427)
23 3qb0_A Actin-related protein 4 99.6 1.9E-15 6.6E-20 163.1 14.5 178 8-247 24-209 (498)
24 1v5n_A PDI-like hypothetical p 99.6 3.6E-16 1.2E-20 127.0 0.9 67 463-543 15-81 (89)
25 4fo0_A Actin-related protein 8 99.5 9.2E-13 3.2E-17 148.6 21.6 118 120-248 170-294 (593)
26 2d0o_A DIOL dehydratase-reacti 99.4 8.9E-13 3.1E-17 138.5 13.0 197 157-383 368-604 (610)
27 1nbw_A Glycerol dehydratase re 99.4 9.2E-14 3.2E-18 146.6 4.6 194 159-382 372-605 (607)
28 1v5n_A PDI-like hypothetical p 99.4 1.4E-13 4.9E-18 111.7 2.8 59 417-476 22-80 (89)
29 1hux_A Activator of (R)-2-hydr 98.9 6.1E-08 2.1E-12 97.3 20.9 73 307-384 185-257 (270)
30 2ews_A Pantothenate kinase; PA 98.5 4.6E-06 1.6E-10 83.3 18.8 76 301-381 207-286 (287)
31 4am6_A Actin-like protein ARP8 97.9 2.8E-05 9.7E-10 84.9 10.1 96 144-248 222-318 (655)
32 3pfq_A PKC-B, PKC-beta, protei 97.7 1.5E-05 5.1E-10 90.8 3.2 98 432-541 37-148 (674)
33 3mdq_A Exopolyphosphatase; str 97.5 0.0092 3.1E-07 60.7 20.7 78 159-241 92-170 (315)
34 2ivn_A O-sialoglycoprotein end 97.4 0.031 1.1E-06 57.2 24.3 67 315-386 230-301 (330)
35 1t6c_A Exopolyphosphatase; alp 97.4 0.00077 2.6E-08 68.6 11.5 79 159-242 100-178 (315)
36 4db3_A Glcnac kinase, N-acetyl 97.3 0.024 8.2E-07 58.0 21.1 48 334-381 269-324 (327)
37 3vgl_A Glucokinase; ROK family 97.2 0.01 3.5E-07 60.7 17.5 45 169-215 96-140 (321)
38 2i7n_A Pantothenate kinase 1; 97.2 0.005 1.7E-07 63.1 14.7 47 335-381 306-358 (360)
39 3vov_A Glucokinase, hexokinase 97.2 0.06 2E-06 54.3 22.3 44 169-214 98-141 (302)
40 2e2o_A Hexokinase; acetate and 97.1 0.09 3.1E-06 52.9 23.2 49 334-383 239-287 (299)
41 3r8e_A Hypothetical sugar kina 97.1 0.014 4.9E-07 59.6 17.2 49 334-382 260-318 (321)
42 4htl_A Beta-glucoside kinase; 97.0 0.016 5.6E-07 58.4 16.9 50 334-383 237-291 (297)
43 2ch5_A NAGK protein; transfera 97.0 0.34 1.2E-05 49.7 26.9 61 142-209 70-133 (347)
44 2fc7_A ZZZ3 protein; structure 97.0 0.00065 2.2E-08 53.6 4.5 52 443-497 21-77 (82)
45 2fnf_X Putative RAS effector N 97.0 0.00067 2.3E-08 52.2 4.3 44 431-474 22-66 (72)
46 3uej_A NPKC-delta, protein kin 96.9 0.00049 1.7E-08 52.1 3.2 46 429-474 6-54 (65)
47 2enz_A NPKC-theta, protein kin 96.9 0.00076 2.6E-08 51.0 4.2 44 431-474 11-57 (65)
48 3cer_A Possible exopolyphospha 96.9 0.0028 9.7E-08 65.2 9.9 81 160-241 106-191 (343)
49 1u6z_A Exopolyphosphatase; alp 96.9 0.0025 8.7E-08 69.4 9.4 78 160-242 100-177 (513)
50 2db6_A SH3 and cysteine rich d 96.8 0.00035 1.2E-08 54.4 1.7 46 429-474 14-62 (74)
51 2row_A RHO-associated protein 96.8 0.00066 2.3E-08 53.6 3.0 49 425-473 17-70 (84)
52 2yuu_A NPKC-delta, protein kin 96.8 0.00095 3.2E-08 53.2 3.9 44 431-474 16-62 (83)
53 2dip_A Zinc finger SWIM domain 96.8 0.00077 2.6E-08 55.1 3.3 46 444-497 32-79 (98)
54 1ptq_A Protein kinase C delta 96.8 0.00083 2.8E-08 47.8 3.1 42 433-474 1-45 (50)
55 1y8f_A UNC-13 homolog A, MUNC1 96.8 0.0008 2.7E-08 51.0 3.2 44 431-474 12-58 (66)
56 2enn_A NPKC-theta, protein kin 96.7 0.00062 2.1E-08 53.3 2.5 45 430-474 21-68 (77)
57 2gup_A ROK family protein; sug 96.7 0.036 1.2E-06 55.6 16.2 49 335-383 228-287 (292)
58 2eli_A Protein kinase C alpha 96.6 0.0012 4.1E-08 52.8 3.5 43 432-474 17-62 (85)
59 3pfq_A PKC-B, PKC-beta, protei 96.6 0.00056 1.9E-08 77.7 2.1 86 510-600 49-149 (674)
60 2qm1_A Glucokinase; alpha-beta 96.5 0.03 1E-06 57.2 14.3 48 335-382 263-320 (326)
61 2ap1_A Putative regulator prot 96.4 0.036 1.2E-06 56.7 14.2 44 169-214 120-163 (327)
62 2e5r_A Dystrobrevin alpha; ZZ 96.4 0.0014 4.9E-08 48.8 2.4 32 444-475 12-45 (63)
63 1kbe_A Kinase suppressor of RA 96.3 0.0029 9.9E-08 44.4 3.4 41 433-475 5-45 (49)
64 3l0q_A Xylulose kinase; xlylul 96.2 0.0082 2.8E-07 66.3 8.2 84 301-386 409-492 (554)
65 1faq_A RAF-1; transferase, ser 96.1 0.0026 8.9E-08 45.6 2.4 42 432-474 3-44 (52)
66 1tot_A CREB-binding protein; z 96.1 0.00057 1.9E-08 48.7 -1.1 32 443-475 6-38 (52)
67 2aa4_A Mannac kinase, putative 96.1 0.071 2.4E-06 53.3 13.7 47 335-381 234-286 (289)
68 4bc3_A Xylulose kinase; transf 96.0 0.013 4.3E-07 64.6 8.7 78 307-386 407-484 (538)
69 2itm_A Xylulose kinase, xylulo 96.0 0.009 3.1E-07 64.9 7.2 53 333-386 385-437 (484)
70 1z6r_A MLC protein; transcript 96.0 0.16 5.5E-06 53.5 16.8 44 169-214 186-229 (406)
71 3ll3_A Gluconate kinase; xylul 95.9 0.012 4.3E-07 64.0 7.8 51 334-386 393-443 (504)
72 2zf5_O Glycerol kinase; hypert 95.9 0.015 5.1E-07 63.4 8.2 79 302-386 365-443 (497)
73 3i8b_A Xylulose kinase; strain 95.8 0.0099 3.4E-07 64.9 6.7 79 302-386 395-474 (515)
74 1rfh_A RAS association (ralgds 95.8 0.0037 1.3E-07 46.0 2.1 43 432-474 10-53 (59)
75 3hz6_A Xylulokinase; xylulose, 95.8 0.016 5.6E-07 63.2 8.2 78 302-386 375-453 (511)
76 1z05_A Transcriptional regulat 95.8 0.27 9.2E-06 52.2 17.4 45 169-215 208-252 (429)
77 1kbe_A Kinase suppressor of RA 95.6 0.012 4E-07 41.2 3.9 30 511-541 16-45 (49)
78 3zyy_X Iron-sulfur cluster bin 95.6 0.13 4.5E-06 56.5 14.1 84 297-381 498-582 (631)
79 2dip_A Zinc finger SWIM domain 95.5 0.0051 1.7E-07 50.2 2.1 44 510-556 32-77 (98)
80 3g25_A Glycerol kinase; IDP007 95.5 0.016 5.6E-07 63.1 6.8 80 302-386 374-454 (501)
81 2hoe_A N-acetylglucosamine kin 95.5 0.29 1E-05 51.0 16.2 48 335-382 315-370 (380)
82 3jvp_A Ribulokinase; PSI-II, N 95.4 0.017 5.8E-07 64.0 6.8 52 333-386 438-490 (572)
83 2yhw_A Bifunctional UDP-N-acet 95.3 1 3.5E-05 46.0 19.5 44 169-214 131-174 (343)
84 3h3n_X Glycerol kinase; ATP-bi 95.3 0.019 6.7E-07 62.5 6.4 51 334-386 403-453 (506)
85 3ifr_A Carbohydrate kinase, FG 95.3 0.018 6E-07 62.9 6.0 52 333-386 399-450 (508)
86 2p3r_A Glycerol kinase; glycer 95.2 0.017 6E-07 63.0 5.9 51 334-386 401-451 (510)
87 4e1j_A Glycerol kinase; struct 95.2 0.014 5E-07 63.7 5.3 51 334-386 425-475 (520)
88 2dpn_A Glycerol kinase; thermu 95.2 0.032 1.1E-06 60.6 7.8 51 334-386 398-448 (495)
89 3ezw_A Glycerol kinase; glycer 95.2 0.04 1.4E-06 60.3 8.6 80 302-386 372-452 (526)
90 2d4w_A Glycerol kinase; alpha 94.9 0.027 9.2E-07 61.4 6.1 80 302-386 373-453 (504)
91 3eno_A Putative O-sialoglycopr 94.9 3.8 0.00013 41.5 24.9 69 313-386 233-306 (334)
92 2w40_A Glycerol kinase, putati 94.7 0.031 1.1E-06 60.9 5.9 80 302-386 376-457 (503)
93 1sz2_A Glucokinase, glucose ki 94.7 2.5 8.6E-05 42.8 20.1 48 167-215 99-156 (332)
94 3en9_A Glycoprotease, O-sialog 94.7 3 0.0001 45.5 21.9 204 142-378 72-297 (540)
95 1zc6_A Probable N-acetylglucos 94.6 4.2 0.00014 40.6 24.2 62 311-382 229-292 (305)
96 1zbs_A Hypothetical protein PG 94.5 1.8 6.2E-05 42.9 18.2 67 310-383 212-280 (291)
97 3htv_A D-allose kinase, alloki 94.5 2.1 7.3E-05 42.9 18.8 50 334-383 239-299 (310)
98 2e5r_A Dystrobrevin alpha; ZZ 94.4 0.014 4.9E-07 43.3 1.8 33 510-542 12-46 (63)
99 2h3g_X Biosynthetic protein; p 94.4 0.21 7.3E-06 49.1 10.7 20 9-28 2-21 (268)
100 2fc7_A ZZZ3 protein; structure 94.3 0.028 9.7E-07 44.2 3.2 45 510-554 22-73 (82)
101 2uyt_A Rhamnulokinase; rhamnos 94.1 0.053 1.8E-06 58.8 6.2 47 334-383 393-439 (489)
102 4b6d_A RAC GTPase-activating p 93.8 0.026 8.8E-07 41.7 2.0 43 432-474 8-52 (61)
103 2eli_A Protein kinase C alpha 93.1 0.13 4.4E-06 40.9 5.3 31 510-540 29-62 (85)
104 2yuu_A NPKC-delta, protein kin 93.0 0.13 4.4E-06 40.6 5.1 49 546-599 15-63 (83)
105 2enz_A NPKC-theta, protein kin 92.9 0.12 4.2E-06 38.6 4.5 31 510-540 24-57 (65)
106 3djc_A Type III pantothenate k 92.8 1.2 4.1E-05 43.6 12.9 21 8-28 3-23 (266)
107 3cet_A Conserved archaeal prot 92.5 0.03 1E-06 56.2 1.0 38 175-216 109-146 (334)
108 3uej_A NPKC-delta, protein kin 92.5 0.12 4E-06 38.7 3.9 49 546-599 7-55 (65)
109 2ysm_A Myeloid/lymphoid or mix 92.4 0.47 1.6E-05 39.7 8.1 98 442-569 6-105 (111)
110 2db6_A SH3 and cysteine rich d 92.1 0.076 2.6E-06 40.9 2.6 31 510-540 29-62 (74)
111 4b6d_A RAC GTPase-activating p 92.1 0.14 4.7E-06 37.7 3.8 46 548-599 8-53 (61)
112 1faq_A RAF-1; transferase, ser 92.0 0.086 2.9E-06 37.4 2.6 43 548-599 3-45 (52)
113 1ptq_A Protein kinase C delta 92.0 0.15 5.2E-06 35.7 3.8 37 558-599 10-46 (50)
114 2fnf_X Putative RAS effector N 91.9 0.13 4.5E-06 39.3 3.7 31 510-540 36-66 (72)
115 1tot_A CREB-binding protein; z 91.9 0.03 1E-06 39.8 -0.0 31 510-541 7-38 (52)
116 2enn_A NPKC-theta, protein kin 91.6 0.25 8.6E-06 38.3 5.0 49 546-599 21-69 (77)
117 3bex_A Type III pantothenate k 91.4 0.5 1.7E-05 45.9 8.2 21 8-28 4-24 (249)
118 1y8f_A UNC-13 homolog A, MUNC1 91.4 0.14 4.9E-06 38.4 3.4 47 548-599 13-59 (66)
119 3v43_A Histone acetyltransfera 91.4 0.18 6.2E-06 42.3 4.4 98 444-568 6-112 (112)
120 3hi0_A Putative exopolyphospha 91.0 0.33 1.1E-05 52.6 7.2 76 159-240 103-178 (508)
121 2row_A RHO-associated protein 91.0 0.26 9E-06 38.7 4.6 53 541-598 17-71 (84)
122 1rfh_A RAS association (ralgds 90.9 0.12 4.1E-06 37.8 2.4 44 548-599 10-54 (59)
123 2ysm_A Myeloid/lymphoid or mix 90.7 0.78 2.7E-05 38.3 7.7 73 509-598 7-86 (111)
124 3h6e_A Carbohydrate kinase, FG 90.7 0.23 7.8E-06 53.5 5.4 71 307-383 362-435 (482)
125 3ky9_A Proto-oncogene VAV; cal 90.6 0.14 4.6E-06 57.0 3.7 45 430-474 516-563 (587)
126 1r79_A Diacylglycerol kinase, 90.2 0.21 7E-06 39.3 3.3 37 559-599 38-74 (84)
127 2vrw_B P95VAV, VAV1, proto-onc 89.3 0.2 6.9E-06 52.7 3.6 44 431-474 345-391 (406)
128 3mcp_A Glucokinase; structural 88.6 3.4 0.00012 42.5 12.2 45 168-214 107-164 (366)
129 3qbx_A Anhydro-N-acetylmuramic 88.2 1 3.6E-05 45.9 7.8 72 309-383 261-336 (371)
130 1woq_A Inorganic polyphosphate 86.8 4.2 0.00014 39.7 11.2 49 334-385 214-263 (267)
131 3o8m_A Hexokinase; rnaseh-like 86.1 1.4 4.9E-05 46.9 7.7 56 156-215 185-242 (485)
132 2yhx_A Hexokinase B; transfera 86.0 1.5 5E-05 46.6 7.8 55 157-215 164-220 (457)
133 2kwj_A Zinc finger protein DPF 85.5 0.37 1.3E-05 40.6 2.3 74 511-598 3-90 (114)
134 3ven_A O-carbamoyltransferase 85.2 30 0.001 37.5 17.6 80 303-387 280-361 (576)
135 3cxl_A N-chimerin; SH2, RHO-GA 85.1 0.4 1.4E-05 51.3 2.9 43 432-474 209-254 (463)
136 3v43_A Histone acetyltransfera 85.0 0.48 1.6E-05 39.7 2.7 75 510-597 6-93 (112)
137 2kwj_A Zinc finger protein DPF 84.1 0.72 2.5E-05 38.8 3.5 96 445-567 3-107 (114)
138 3cqy_A Anhydro-N-acetylmuramic 83.6 2.2 7.7E-05 43.5 7.4 71 308-382 267-341 (370)
139 3epq_A Putative fructokinase; 82.5 3.1 0.00011 41.5 8.1 44 169-214 97-140 (302)
140 4gne_A Histone-lysine N-methyl 80.0 4.2 0.00014 33.5 6.5 70 443-540 15-86 (107)
141 3ttc_A HYPF, transcriptional r 79.6 5.7 0.0002 43.9 9.5 66 313-383 583-651 (657)
142 4g9i_A Hydrogenase maturation 79.0 6 0.00021 44.8 9.7 75 304-383 679-759 (772)
143 3ifr_A Carbohydrate kinase, FG 78.4 1.4 4.6E-05 47.8 4.0 28 1-28 1-28 (508)
144 2l5u_A Chromodomain-helicase-D 77.8 1.7 5.8E-05 31.8 3.1 48 510-569 12-59 (61)
145 2ku3_A Bromodomain-containing 77.7 1 3.6E-05 34.1 2.0 48 510-569 17-67 (71)
146 3vth_A Hydrogenase maturation 76.4 6.7 0.00023 44.3 9.0 53 334-386 693-750 (761)
147 1mm2_A MI2-beta; PHD, zinc fin 76.3 4 0.00014 29.7 4.9 49 509-569 9-57 (61)
148 4gne_A Histone-lysine N-methyl 76.0 4.8 0.00016 33.1 5.7 66 509-599 15-87 (107)
149 2lq6_A Bromodomain-containing 75.1 1.4 4.8E-05 34.9 2.2 44 431-474 5-50 (87)
150 2ku3_A Bromodomain-containing 74.9 2.2 7.4E-05 32.3 3.1 35 441-475 14-51 (71)
151 1bdg_A Hexokinase; phosphotran 74.5 11 0.00039 39.7 9.8 56 156-215 172-229 (451)
152 1fp0_A KAP-1 corepressor; PHD 74.2 6.7 0.00023 30.9 5.9 48 509-568 25-72 (88)
153 1r79_A Diacylglycerol kinase, 73.8 3.7 0.00013 32.1 4.3 41 433-473 28-72 (84)
154 1iv0_A Hypothetical protein; r 73.4 2.3 7.9E-05 34.5 3.1 21 7-27 1-21 (98)
155 3aap_A Ectonucleoside triphosp 73.0 3.6 0.00012 42.0 5.3 20 196-215 139-158 (353)
156 3ll3_A Gluconate kinase; xylul 71.1 2.5 8.4E-05 45.7 3.7 24 1-27 1-24 (504)
157 2yql_A PHD finger protein 21A; 70.1 4.4 0.00015 28.9 3.7 47 509-567 9-55 (56)
158 4bbq_A Lysine-specific demethy 69.7 3.4 0.00012 34.6 3.6 42 521-568 73-114 (117)
159 3ky9_A Proto-oncogene VAV; cal 69.7 3.5 0.00012 45.5 4.6 48 547-599 517-564 (587)
160 3i8b_A Xylulose kinase; strain 69.1 3.3 0.00011 44.8 4.2 23 1-25 1-23 (515)
161 1xwh_A Autoimmune regulator; P 68.6 5.9 0.0002 29.3 4.3 48 510-569 9-56 (66)
162 3h3n_X Glycerol kinase; ATP-bi 68.2 3.5 0.00012 44.6 4.1 25 1-27 1-25 (506)
163 2lv9_A Histone-lysine N-methyl 67.2 9.7 0.00033 30.7 5.6 47 510-568 29-76 (98)
164 2lri_C Autoimmune regulator; Z 67.2 6.4 0.00022 29.2 4.1 48 510-569 13-60 (66)
165 1weu_A Inhibitor of growth fam 66.0 5.8 0.0002 31.5 3.9 47 510-569 37-86 (91)
166 1cza_N Hexokinase type I; stru 65.6 20 0.00067 41.7 10.0 54 157-214 184-240 (917)
167 3l0q_A Xylulose kinase; xlylul 65.4 3.9 0.00013 44.7 3.9 20 8-27 6-25 (554)
168 3o36_A Transcription intermedi 64.8 6.7 0.00023 35.8 4.8 48 510-569 5-52 (184)
169 2vrw_B P95VAV, VAV1, proto-onc 64.3 4.1 0.00014 42.5 3.7 49 547-600 345-393 (406)
170 4e1j_A Glycerol kinase; struct 64.2 4.2 0.00014 44.0 3.8 20 8-27 27-46 (520)
171 2k16_A Transcription initiatio 64.0 4.7 0.00016 30.7 3.0 34 442-475 17-51 (75)
172 3jvp_A Ribulokinase; PSI-II, N 63.0 4.5 0.00015 44.4 3.8 19 8-26 6-24 (572)
173 1cza_N Hexokinase type I; stru 62.9 31 0.0011 40.0 11.0 57 155-215 630-689 (917)
174 2q2r_A Glucokinase 1, putative 62.9 5.1 0.00018 41.2 4.0 20 7-26 29-48 (373)
175 1wen_A Inhibitor of growth fam 62.5 18 0.0006 27.2 5.9 47 510-569 17-66 (71)
176 4bc3_A Xylulose kinase; transf 62.0 4.9 0.00017 43.8 3.8 27 1-27 3-30 (538)
177 3u5n_A E3 ubiquitin-protein li 62.0 6.3 0.00022 36.8 4.1 48 510-569 8-55 (207)
178 1wep_A PHF8; structural genomi 61.8 6.1 0.00021 30.5 3.3 50 510-569 13-64 (79)
179 2uyt_A Rhamnulokinase; rhamnos 61.5 4.2 0.00014 43.7 3.1 22 1-25 1-22 (489)
180 3o70_A PHD finger protein 13; 61.5 8.4 0.00029 28.7 3.9 46 510-567 20-66 (68)
181 3ezw_A Glycerol kinase; glycer 61.3 4.8 0.00016 43.7 3.6 20 8-27 5-24 (526)
182 2lbm_A Transcriptional regulat 61.1 3.6 0.00012 35.7 2.0 33 559-601 63-95 (142)
183 1we9_A PHD finger family prote 61.0 7.7 0.00026 28.4 3.6 51 510-569 7-59 (64)
184 2g6q_A Inhibitor of growth pro 60.7 4.2 0.00014 29.8 2.0 46 510-568 12-60 (62)
185 1vhx_A Putative holliday junct 60.4 5 0.00017 35.3 2.9 21 7-27 3-23 (150)
186 1hjr_A Holliday junction resol 60.3 9.3 0.00032 33.9 4.6 19 7-25 1-19 (158)
187 3hm8_A Hexokinase-3; glucose, 60.1 25 0.00086 36.8 8.6 52 158-213 162-216 (445)
188 3f9m_A Glucokinase; hexokinase 59.7 29 0.00098 36.7 9.0 54 157-215 185-241 (470)
189 3hz6_A Xylulokinase; xylulose, 59.6 5.6 0.00019 42.9 3.8 20 8-27 6-25 (511)
190 1f62_A Transcription factor WS 58.7 6.8 0.00023 27.2 2.8 46 512-567 3-49 (51)
191 3cj1_A Ectonucleoside triphosp 57.7 14 0.00047 39.1 6.2 21 196-216 189-209 (456)
192 3asl_A E3 ubiquitin-protein li 56.9 13 0.00044 27.9 4.3 55 503-568 14-69 (70)
193 3ql9_A Transcriptional regulat 56.7 4.6 0.00016 34.4 1.9 33 558-600 56-88 (129)
194 2k16_A Transcription initiatio 56.1 4.6 0.00016 30.8 1.7 50 510-569 19-69 (75)
195 1saz_A Probable butyrate kinas 55.1 24 0.00084 36.2 7.6 48 334-381 295-346 (381)
196 1nu0_A Hypothetical protein YQ 54.8 12 0.00039 32.5 4.2 21 8-28 4-24 (138)
197 2vnf_A ING 4, P29ING4, inhibit 54.5 5.6 0.00019 28.9 1.8 46 510-568 11-59 (60)
198 3c6w_A P28ING5, inhibitor of g 54.0 5.6 0.00019 28.8 1.7 46 510-568 10-58 (59)
199 2ro1_A Transcription intermedi 53.1 10 0.00036 34.7 3.9 47 510-568 3-49 (189)
200 2lri_C Autoimmune regulator; Z 51.5 11 0.00037 28.0 3.0 30 444-475 13-42 (66)
201 4ep4_A Crossover junction endo 51.5 13 0.00045 33.2 4.1 19 7-25 1-19 (166)
202 3h6e_A Carbohydrate kinase, FG 50.5 7.7 0.00026 41.5 2.9 20 8-27 7-26 (482)
203 3g25_A Glycerol kinase; IDP007 50.1 9.8 0.00033 40.9 3.7 20 8-27 7-26 (501)
204 3ask_A E3 ubiquitin-protein li 50.1 16 0.00054 34.4 4.5 54 503-567 170-224 (226)
205 2puy_A PHD finger protein 21A; 49.7 13 0.00043 26.8 3.1 48 509-568 5-52 (60)
206 2l43_A N-teminal domain from h 49.6 5.6 0.00019 31.5 1.2 48 510-569 26-76 (88)
207 4am6_A Actin-like protein ARP8 49.5 10 0.00035 41.6 3.6 32 8-48 41-72 (655)
208 2l5u_A Chromodomain-helicase-D 49.3 15 0.00051 26.6 3.4 33 441-475 9-41 (61)
209 1fp0_A KAP-1 corepressor; PHD 49.0 24 0.00082 27.7 4.7 31 443-475 25-55 (88)
210 3cxl_A N-chimerin; SH2, RHO-GA 48.6 9.8 0.00034 40.4 3.3 46 549-599 210-255 (463)
211 2p3r_A Glycerol kinase; glycer 48.4 10 0.00035 40.9 3.5 20 8-27 4-23 (510)
212 2zf5_O Glycerol kinase; hypert 47.4 10 0.00036 40.6 3.4 19 8-26 4-22 (497)
213 2jtn_A LIM domain-binding prot 47.0 16 0.00054 33.2 4.1 30 443-473 60-89 (182)
214 2yt5_A Metal-response element- 46.9 16 0.00055 26.8 3.4 51 510-568 7-61 (66)
215 1wil_A KIAA1045 protein; ring 46.3 6.1 0.00021 30.5 0.9 58 510-567 16-75 (89)
216 3o70_A PHD finger protein 13; 46.0 17 0.00057 27.1 3.3 34 441-475 17-51 (68)
217 2w40_A Glycerol kinase, putati 45.3 11 0.00038 40.5 3.2 20 8-27 5-24 (503)
218 1we9_A PHD finger family prote 44.2 19 0.00066 26.2 3.4 35 441-475 4-40 (64)
219 2rgt_A Fusion of LIM/homeobox 43.8 20 0.00067 32.1 4.1 29 444-473 7-35 (169)
220 2dpn_A Glycerol kinase; thermu 43.7 12 0.00039 40.3 3.0 20 8-27 3-22 (495)
221 2e6s_A E3 ubiquitin-protein li 43.4 22 0.00076 27.1 3.7 54 503-567 22-76 (77)
222 3zx3_A Ectonucleoside triphosp 43.2 30 0.001 36.3 5.9 44 172-215 150-199 (452)
223 2yql_A PHD finger protein 21A; 42.6 34 0.0012 24.1 4.4 31 443-475 9-39 (56)
224 1wev_A Riken cDNA 1110020M19; 42.1 18 0.00063 28.4 3.2 53 510-568 17-72 (88)
225 1z60_A TFIIH basal transcripti 41.9 6.7 0.00023 28.3 0.5 29 444-472 16-45 (59)
226 2ct0_A Non-SMC element 1 homol 41.2 15 0.0005 27.9 2.3 31 442-473 14-44 (74)
227 3ny3_A E3 ubiquitin-protein li 41.1 8.4 0.00029 29.4 1.0 53 514-569 6-63 (75)
228 2e6r_A Jumonji/ARID domain-con 40.9 15 0.0005 29.3 2.4 49 510-568 17-66 (92)
229 2xb1_A Pygopus homolog 2, B-ce 40.4 16 0.00056 29.8 2.7 56 510-569 4-62 (105)
230 3epq_A Putative fructokinase; 40.3 46 0.0016 32.8 6.6 49 334-382 224-288 (302)
231 2d4w_A Glycerol kinase; alpha 39.8 15 0.00051 39.5 3.1 20 8-27 3-22 (504)
232 2itm_A Xylulose kinase, xylulo 39.6 16 0.00055 39.0 3.3 19 9-27 2-20 (484)
233 1wev_A Riken cDNA 1110020M19; 39.5 18 0.00062 28.4 2.7 33 443-475 16-51 (88)
234 2lq6_A Bromodomain-containing 39.3 22 0.00074 28.0 3.1 32 560-599 18-51 (87)
235 1weo_A Cellulose synthase, cat 39.3 11 0.00037 29.5 1.3 46 510-568 17-67 (93)
236 1wem_A Death associated transc 38.6 15 0.0005 28.0 2.0 55 509-569 16-71 (76)
237 2jmi_A Protein YNG1, ING1 homo 38.6 24 0.00082 27.9 3.3 45 510-567 27-75 (90)
238 1wew_A DNA-binding family prot 38.5 15 0.00052 28.1 2.1 54 510-569 17-73 (78)
239 1xwh_A Autoimmune regulator; P 38.0 41 0.0014 24.6 4.4 31 443-475 8-38 (66)
240 1f62_A Transcription factor WS 37.2 26 0.00089 24.1 3.0 30 445-474 2-32 (51)
241 1wg2_A Zinc finger (AN1-like) 36.5 44 0.0015 24.4 4.1 40 443-492 15-54 (64)
242 2e1z_A Propionate kinase; TDCD 36.0 37 0.0013 35.0 5.1 45 310-358 310-355 (415)
243 3o8m_A Hexokinase; rnaseh-like 35.6 96 0.0033 32.8 8.4 25 195-219 78-102 (485)
244 3shb_A E3 ubiquitin-protein li 35.6 26 0.00088 26.8 3.0 55 502-567 21-76 (77)
245 2yt5_A Metal-response element- 35.3 30 0.001 25.3 3.2 33 443-475 6-41 (66)
246 1x4u_A Zinc finger, FYVE domai 35.0 26 0.00089 27.2 3.0 60 510-569 15-76 (84)
247 1mm2_A MI2-beta; PHD, zinc fin 34.7 50 0.0017 23.7 4.3 31 443-475 9-39 (61)
248 1wfh_A Zinc finger (AN1-like) 33.4 51 0.0018 24.0 4.0 41 442-492 14-54 (64)
249 2dkt_A Ring finger and CHY zin 32.9 23 0.00079 30.5 2.5 20 512-531 104-123 (143)
250 2q2r_A Glucokinase 1, putative 32.3 70 0.0024 32.5 6.7 18 169-186 127-144 (373)
251 3lqh_A Histone-lysine N-methyl 32.0 26 0.00089 31.8 2.9 57 510-569 3-64 (183)
252 1weu_A Inhibitor of growth fam 32.0 52 0.0018 26.0 4.3 34 441-475 34-70 (91)
253 3a1b_A DNA (cytosine-5)-methyl 31.8 14 0.00049 32.5 1.1 36 558-603 78-115 (159)
254 1wil_A KIAA1045 protein; ring 31.5 20 0.00068 27.7 1.6 31 444-474 16-46 (89)
255 2puy_A PHD finger protein 21A; 30.5 53 0.0018 23.4 3.8 31 443-475 5-35 (60)
256 3zyy_X Iron-sulfur cluster bin 30.3 1.2E+02 0.0042 33.1 8.4 38 311-348 266-303 (631)
257 2jmi_A Protein YNG1, ING1 homo 29.8 42 0.0014 26.5 3.4 34 441-475 24-60 (90)
258 1wfp_A Zinc finger (AN1-like) 29.7 53 0.0018 24.7 3.6 25 442-467 24-48 (74)
259 1g99_A Acetate kinase; alpha/b 29.3 72 0.0025 32.8 5.9 46 309-358 301-347 (408)
260 1zxo_A Conserved hypothetical 29.3 10 0.00034 37.4 -0.4 59 143-208 58-118 (291)
261 2lv9_A Histone-lysine N-methyl 29.3 39 0.0013 27.1 3.2 32 443-475 28-60 (98)
262 2cup_A Skeletal muscle LIM-pro 28.9 98 0.0033 24.4 5.7 29 444-472 6-34 (101)
263 1nbw_A Glycerol dehydratase re 28.6 18 0.00062 38.8 1.4 46 145-190 132-178 (607)
264 2pv0_B DNA (cytosine-5)-methyl 28.5 15 0.0005 37.6 0.6 35 559-603 93-129 (386)
265 2yhx_A Hexokinase B; transfera 28.0 2.2E+02 0.0076 29.7 9.7 26 195-220 59-84 (457)
266 2vpb_A Hpygo1, pygopus homolog 27.9 40 0.0014 24.7 2.8 36 558-599 7-43 (65)
267 2xb1_A Pygopus homolog 2, B-ce 27.8 37 0.0013 27.6 2.9 33 443-475 3-38 (105)
268 2ct0_A Non-SMC element 1 homol 27.7 26 0.00088 26.5 1.7 32 560-600 16-47 (74)
269 3h0g_L DNA-directed RNA polyme 27.5 26 0.00089 25.6 1.6 23 510-532 22-47 (63)
270 1x4i_A Inhibitor of growth pro 27.4 38 0.0013 25.3 2.6 33 442-475 5-40 (70)
271 3nw0_A Non-structural maintena 27.4 20 0.00069 34.1 1.4 31 442-473 179-209 (238)
272 3o7a_A PHD finger protein 13 v 27.4 42 0.0014 23.2 2.7 46 510-567 5-51 (52)
273 3mhs_A Ubiquitin carboxyl-term 26.9 22 0.00077 37.7 1.8 55 511-568 50-107 (476)
274 3nis_A E3 ubiquitin-protein li 26.7 62 0.0021 25.0 3.8 55 514-569 10-69 (82)
275 2ehe_A Four and A half LIM dom 26.6 1.7E+02 0.0057 21.9 6.5 11 510-520 44-54 (82)
276 2e6s_A E3 ubiquitin-protein li 26.5 70 0.0024 24.3 4.0 31 445-475 28-59 (77)
277 3nw0_A Non-structural maintena 26.4 26 0.0009 33.3 2.0 33 559-600 180-212 (238)
278 1zxo_A Conserved hypothetical 26.3 27 0.00094 34.2 2.2 43 334-381 232-276 (291)
279 3cet_A Conserved archaeal prot 25.5 41 0.0014 33.6 3.2 37 9-45 2-43 (334)
280 2l43_A N-teminal domain from h 25.5 26 0.00089 27.5 1.5 34 442-475 24-60 (88)
281 2lo3_A SAGA-associated factor 25.4 12 0.00043 24.5 -0.3 10 510-519 18-27 (44)
282 2ri7_A Nucleosome-remodeling f 25.1 19 0.00066 32.3 0.7 51 509-569 8-60 (174)
283 1wee_A PHD finger family prote 25.1 48 0.0016 24.7 2.9 49 510-569 17-67 (72)
284 1wfl_A Zinc finger protein 216 24.9 76 0.0026 23.9 3.7 41 442-492 24-64 (74)
285 2e6r_A Jumonji/ARID domain-con 24.7 53 0.0018 26.0 3.1 33 443-475 16-49 (92)
286 3lm2_A Putative kinase; struct 24.5 37 0.0013 31.9 2.6 40 168-215 90-129 (226)
287 2g6q_A Inhibitor of growth pro 24.5 35 0.0012 24.8 1.9 33 442-475 10-45 (62)
288 3c5k_A HD6, histone deacetylas 24.2 28 0.00096 28.6 1.5 50 510-564 25-79 (109)
289 1z60_A TFIIH basal transcripti 24.2 21 0.00071 25.7 0.6 29 510-538 16-45 (59)
290 2vnf_A ING 4, P29ING4, inhibit 24.0 37 0.0013 24.4 1.9 33 442-475 9-44 (60)
291 2ecm_A Ring finger and CHY zin 24.0 95 0.0032 21.0 4.2 39 559-603 5-43 (55)
292 1wen_A Inhibitor of growth fam 23.8 67 0.0023 23.9 3.4 33 442-475 15-50 (71)
293 1twf_I B12.6, DNA-directed RNA 23.7 1.1E+02 0.0037 25.5 5.1 25 510-534 5-37 (122)
294 3asl_A E3 ubiquitin-protein li 23.6 72 0.0025 23.7 3.5 30 446-475 21-51 (70)
295 1wep_A PHF8; structural genomi 23.6 44 0.0015 25.5 2.4 34 441-475 10-45 (79)
296 1wjv_A Cell growth regulating 23.3 27 0.00092 26.7 1.1 32 509-540 10-61 (79)
297 1hnj_A Beta-ketoacyl-acyl carr 23.0 1E+02 0.0035 30.3 5.8 48 308-358 211-258 (317)
298 2f9w_A Pantothenate kinase; CO 23.0 59 0.002 31.5 3.8 21 8-28 24-45 (271)
299 2jne_A Hypothetical protein YF 22.9 22 0.00075 28.2 0.5 39 433-471 20-64 (101)
300 3j20_Y 30S ribosomal protein S 22.9 47 0.0016 22.9 2.2 23 510-532 20-46 (50)
301 2vpb_A Hpygo1, pygopus homolog 22.7 32 0.0011 25.2 1.4 34 510-543 9-45 (65)
302 1x4u_A Zinc finger, FYVE domai 22.5 64 0.0022 24.9 3.2 33 442-474 13-47 (84)
303 3lwd_A 6-phosphogluconolactona 22.4 1.3E+02 0.0045 28.1 6.0 47 304-355 8-54 (226)
304 3c6w_A P28ING5, inhibitor of g 22.2 42 0.0014 24.0 1.9 33 442-475 8-43 (59)
305 3h0g_I DNA-directed RNA polyme 21.9 1.2E+02 0.0042 24.8 5.0 25 510-534 5-37 (113)
306 1saz_A Probable butyrate kinas 21.4 69 0.0024 32.7 4.2 20 8-27 3-22 (381)
307 1x4i_A Inhibitor of growth pro 21.4 43 0.0015 25.0 1.9 45 510-567 7-54 (70)
308 3t69_A Putative 2-dehydro-3-de 21.2 59 0.002 32.4 3.4 48 336-386 260-307 (330)
309 3cer_A Possible exopolyphospha 20.7 4.6E+02 0.016 26.1 10.1 70 195-281 14-85 (343)
310 2jun_A Midline-1; B-BOX, TRIM, 20.7 65 0.0022 25.6 3.1 78 510-597 4-87 (101)
311 1mzj_A Beta-ketoacylsynthase I 20.7 1.3E+02 0.0045 29.8 6.1 46 310-358 226-271 (339)
312 1msz_A DNA-binding protein smu 20.5 69 0.0024 25.0 2.9 28 146-173 34-61 (86)
313 4rxn_A Rubredoxin; electron tr 20.4 45 0.0015 23.5 1.6 44 523-569 3-46 (54)
314 1dxg_A Desulforedoxin; non-hem 20.4 36 0.0012 21.6 1.1 16 455-470 4-19 (36)
315 1ovx_A ATP-dependent CLP prote 20.1 20 0.00067 26.5 -0.2 32 432-463 6-46 (67)
No 1
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=6.3e-64 Score=558.62 Aligned_cols=404 Identities=71% Similarity=1.088 Sum_probs=379.3
Q ss_pred CCcCCCCcEEEEecccccEEEEEEECCeEEEEecCCCCcccceEEEEeCCceeecHHHHHHhhhCcCchhhcchhhhCCC
Q 005824 1 MARKEGVLGIGIDLGTTYSCVGVWQHNRVEIIANDQGNRTTPSYVAFTKKERFAGNAAKNQLAMNPTNTVFDAKRLIGRR 80 (675)
Q Consensus 1 M~~~~~~~viGID~GTt~s~va~~~~g~~~~l~~~~g~~~~PS~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~ 80 (675)
|+|. .+||||||||||++|++.+|.++++.+++|++++||+|+|.++++++|..|..+...+|+++++++|+|+|+.
T Consensus 1 M~m~---~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~ 77 (554)
T 1yuw_A 1 MSKG---PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRR 77 (554)
T ss_dssp CCSC---CCEEEEECSSEEEEEEECSSSEEECCCTTSCSEEECCEEECSSCEEETHHHHTTTTTCGGGEECCGGGTTTCC
T ss_pred CCCC---CEEEEEeCcccEEEEEEECCEEEEEECCCCCeecceEEEEcCCcEEEcHHHHHhhhhChhhehHhhHHhcCCC
Confidence 7775 5799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhhhhhcccCCeEEEeCCCCCceEEEEEcCceeeeeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHH
Q 005824 81 FSDVSVQEDIKLWPFKVIAGPNDKPMIAVKYKGGEKKYAAEDISSMVLAKMREIAKAYLGSNVKNAVVTVPAYFTDSQRQ 160 (675)
Q Consensus 81 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~ 160 (675)
++++.++..++.+||.+. +.++.+.+.+.+.+....++++++++++|++|++.++.+++.++.++|||||++|++.||+
T Consensus 78 ~~d~~v~~~~~~~p~~v~-~~~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~~v~~~VitVPa~f~~~qr~ 156 (554)
T 1yuw_A 78 FDDAVVQSDMKHWPFMVV-NDAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQ 156 (554)
T ss_dssp SSCSHHHHHHTTCSSEEE-EETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHH
T ss_pred CCcHHHHHHhhcCCeEEE-ecCCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHH
Confidence 999889998999999988 4578888888888878899999999999999999999999988999999999999999999
Q ss_pred HHHHHHHHcCCceeEeeChhHHHHHHhccccCCCCCceEEEEEeCCCcEEEEEEEEeCCEEEEEEEcCCCCCcHHHHHHH
Q 005824 161 ATKDAGAMAGLNVLKIISEPTAAAIAYGLHRKASSEKNVLIFDLGGGTFDVSLLTIGKGIFKVKATAGDTHLGGEDFDNR 240 (675)
Q Consensus 161 ~l~~a~~~Agl~~v~li~Ep~Aaa~~~~~~~~~~~~~~vlvvDiGggT~dvsv~~~~~~~~~~l~~~~~~~~GG~~id~~ 240 (675)
++++|++.||++.+.+++||+|||++|+.+.....+..++|||+||||||++++++.++.++++++.++..+||++||+.
T Consensus 157 a~~~A~~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~ 236 (554)
T 1yuw_A 157 ATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNR 236 (554)
T ss_dssp HHHHHHHTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHH
T ss_pred HHHHHHHHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHHHHHHH
Confidence 99999999999999999999999999988765445789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHccCCCceEEEEecccCCceeEEEEeHHHHHHHHHHHHHHHHHH
Q 005824 241 MVNHFIQEFKRKKKKDISGSPRAVQRLTTACERAKRTLSSTSQTTIEIDSLYEGIDFSSVITRARFEELNMDLFRKCIKH 320 (675)
Q Consensus 241 i~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~ 320 (675)
|++++.++|.++++.++..+++.+.+|+.+||++|+.|+......+.++.+.+|.++...|+|++|+++++++++++.+.
T Consensus 237 l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g~~~~~~ltr~~~e~l~~~~~~~i~~~ 316 (554)
T 1yuw_A 237 MVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDP 316 (554)
T ss_dssp HHHHHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSSSCCEEEEEEHHHHHHHTHHHHHHTTHH
T ss_pred HHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccCCceEEEEEEHHHHHHHHHHHHHHHHHH
Confidence 99999999999998888889999999999999999999999989999988888888999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCccEEEEecCCcChHHHHHHHHHhcCCCcccccCCchhhHHhHHHHHHHHHcCCCCCCccceEEEEe
Q 005824 321 VDMCLRNGKMDKSRVDDVVIVGGSARIPKVQQLLQEFFNGKRLCQNINPDEAVAYGAAVQAAVLSGNRSDKVEDTVVLDV 400 (675)
Q Consensus 321 i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~~~~~~~~~~~~~d~ 400 (675)
++++|+++++...+++.|+|+||+|++|+|++.|++.|++.++..+.||++|||.||+++++.++++..++++++.+.|+
T Consensus 317 i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~~~~~~~~~~~~~~dv 396 (554)
T 1yuw_A 317 VEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDV 396 (554)
T ss_dssp HHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTTSCCCCCTTSSCCCCB
T ss_pred HHHHHHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhcCCccccccceEEEEe
Confidence 99999999988889999999999999999999999999778888899999999999999999999876667889999999
Q ss_pred ccCCCCCC
Q 005824 401 NSKYNSSL 408 (675)
Q Consensus 401 ~p~~~~~~ 408 (675)
+|+++|..
T Consensus 397 ~p~slgi~ 404 (554)
T 1yuw_A 397 TPLSLGIE 404 (554)
T ss_dssp CSSCEEEE
T ss_pred eeeEEEEE
Confidence 99998854
No 2
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=1.9e-63 Score=563.34 Aligned_cols=398 Identities=33% Similarity=0.546 Sum_probs=374.2
Q ss_pred cEEEEecccccEEEEEEECCeEEEEecCCCCcccceEEEEeCCceeecHHHHHHhhhCcCchhhcchhhhCCCCCChhhh
Q 005824 8 LGIGIDLGTTYSCVGVWQHNRVEIIANDQGNRTTPSYVAFTKKERFAGNAAKNQLAMNPTNTVFDAKRLIGRRFSDVSVQ 87 (675)
Q Consensus 8 ~viGID~GTt~s~va~~~~g~~~~l~~~~g~~~~PS~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~v~ 87 (675)
.+||||||||||+||++.+|.++++.+..|++.+||+|+|.++++++|+.|..+...+|.++++++|+++|+.++++.++
T Consensus 3 ~~iGIDlGTtns~va~~~~g~~~ii~n~~g~r~tPS~Vaf~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v~ 82 (675)
T 3d2f_A 3 TPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPDFE 82 (675)
T ss_dssp CCEEEECCSSEEEEEEEETTEEEEECCTTSCSSEECCEEECSSSEEETHHHHHHHTTCGGGEECCHHHHTTCBTTCTTHH
T ss_pred cEEEEEcCCCcEEEEEEECCeeEEEECCCCCcccceEEEECCCcEEecHHHHHhhhhChHhHHHHHHHHhCCCCCcHHHH
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999899
Q ss_pred hhcccCCeEEEeCCCCCceEEEEEcCceeeeeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHHHH
Q 005824 88 EDIKLWPFKVIAGPNDKPMIAVKYKGGEKKYAAEDISSMVLAKMREIAKAYLGSNVKNAVVTVPAYFTDSQRQATKDAGA 167 (675)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~l~~a~~ 167 (675)
...+.+||.+....++...+.+.+.+....++++++++++|++|++.++.+++.++.++|||||++|++.||+++++|++
T Consensus 83 ~~~~~~p~~v~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa~ 162 (675)
T 3d2f_A 83 QESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAAR 162 (675)
T ss_dssp HHHTTCCSEEEECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred HHHhhCCeeEEEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHHH
Confidence 88899999998777888888888877778899999999999999999999999889999999999999999999999999
Q ss_pred HcCCceeEeeChhHHHHHHhccccCC-----CCCceEEEEEeCCCcEEEEEEEEeCCEEEEEEEcCCCCCcHHHHHHHHH
Q 005824 168 MAGLNVLKIISEPTAAAIAYGLHRKA-----SSEKNVLIFDLGGGTFDVSLLTIGKGIFKVKATAGDTHLGGEDFDNRMV 242 (675)
Q Consensus 168 ~Agl~~v~li~Ep~Aaa~~~~~~~~~-----~~~~~vlvvDiGggT~dvsv~~~~~~~~~~l~~~~~~~~GG~~id~~i~ 242 (675)
.||++.+++++||+|||++|+..... ..+.+++|||+||||||++++++.++.++++++.++..+||++||+.|+
T Consensus 163 ~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~l~ 242 (675)
T 3d2f_A 163 IAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAIT 242 (675)
T ss_dssp HTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHH
T ss_pred HcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHHHHHHHHH
Confidence 99999999999999999999875421 3578999999999999999999999999999999889999999999999
Q ss_pred HHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHccCCCceEEEEecccCCceeEEEEeHHHHHHHHHHHHHHHHHHHH
Q 005824 243 NHFIQEFKRKKKKDISGSPRAVQRLTTACERAKRTLSSTSQTTIEIDSLYEGIDFSSVITRARFEELNMDLFRKCIKHVD 322 (675)
Q Consensus 243 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~i~ 322 (675)
+++.++|.++++.++..+++.+.+|+.+||++|+.||......+.++.+.+|.++.+.|||++|+++++++++++.+.++
T Consensus 243 ~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~~i~~~i~ 322 (675)
T 3d2f_A 243 EHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTEPVT 322 (675)
T ss_dssp HHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHTTTTHHHH
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccCceEEEEEeHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888888999999999999999999998888889998888888899999999999999999999999999
Q ss_pred HHHHcCCCCCCCccEEEEecCCcChHHHHHHHHHhcCCCcccccCCchhhHHhHHHHHHHHHcCCCCCCccceEEEEecc
Q 005824 323 MCLRNGKMDKSRVDDVVIVGGSARIPKVQQLLQEFFNGKRLCQNINPDEAVAYGAAVQAAVLSGNRSDKVEDTVVLDVNS 402 (675)
Q Consensus 323 ~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~~~~~~~~~~~~~d~~p 402 (675)
++|+++++...+|+.|+|+||+|++|+|++.|++.| +.++....||++|||+||+++++.+++ .++++++.+.|++|
T Consensus 323 ~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~f-g~~~~~~~nPdeaVA~GAa~~a~~ls~--~~~v~~~~l~Dv~p 399 (675)
T 3d2f_A 323 KALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAF-GKPLSTTLNQDEAIAKGAAFICAIHSP--TLRVRPFKFEDIHP 399 (675)
T ss_dssp HHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHH-TSCEECCSCTTTHHHHHHHHHHHHTCS--SCCCCCCEEEEEEC
T ss_pred HHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhc-CCCccccCCcchHHHHHHHHHHHHhCC--CCcccceEEEeeee
Confidence 999999988889999999999999999999999999 688888999999999999999999998 45678999999999
Q ss_pred CCCCCC
Q 005824 403 KYNSSL 408 (675)
Q Consensus 403 ~~~~~~ 408 (675)
+++|..
T Consensus 400 ~slgi~ 405 (675)
T 3d2f_A 400 YSVSYS 405 (675)
T ss_dssp SCEEEE
T ss_pred cceEee
Confidence 999863
No 3
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=1.4e-61 Score=544.74 Aligned_cols=391 Identities=47% Similarity=0.765 Sum_probs=365.4
Q ss_pred cEEEEecccccEEEEEEECCeEEEEecCCCCcccceEEEEeCC-ceeecHHHHHHhhhCcCchhhcchhhhCCCCCChhh
Q 005824 8 LGIGIDLGTTYSCVGVWQHNRVEIIANDQGNRTTPSYVAFTKK-ERFAGNAAKNQLAMNPTNTVFDAKRLIGRRFSDVSV 86 (675)
Q Consensus 8 ~viGID~GTt~s~va~~~~g~~~~l~~~~g~~~~PS~v~~~~~-~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~v 86 (675)
.+||||||||||+||++.+|.++++.+..|++.+||+|+|.++ ++++|..|..+...+|.++++++|+++|+.++++.+
T Consensus 3 ~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v 82 (605)
T 4b9q_A 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEV 82 (605)
T ss_dssp CEEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBTTSHHH
T ss_pred cEEEEEcCCCcEEEEEEECCEEEEEECCCCCcccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCCCCHHH
Confidence 6899999999999999999999999999999999999999855 799999999999999999999999999999999999
Q ss_pred hhhcccCCeEEEeCCCCCceEEEEEcCceeeeeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHHH
Q 005824 87 QEDIKLWPFKVIAGPNDKPMIAVKYKGGEKKYAAEDISSMVLAKMREIAKAYLGSNVKNAVVTVPAYFTDSQRQATKDAG 166 (675)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~l~~a~ 166 (675)
+...+.+||.+....++...+.+ . +..++++++++++|++|++.++.+++.++.++|||||++|++.||+++++|+
T Consensus 83 ~~~~~~~p~~~~~~~~g~~~~~~--~--~~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~~~Aa 158 (605)
T 4b9q_A 83 QRDVSIMPFKIIAADNGDAWVEV--K--GQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAG 158 (605)
T ss_dssp HHHHTTCSSEEEECTTSBEEEEE--T--TEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHhhcCCeEEEEcCCCceEEEE--C--CEEECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 99999999999987777766655 2 4689999999999999999999999999999999999999999999999999
Q ss_pred HHcCCceeEeeChhHHHHHHhccccCCCCCceEEEEEeCCCcEEEEEEEEeC----CEEEEEEEcCCCCCcHHHHHHHHH
Q 005824 167 AMAGLNVLKIISEPTAAAIAYGLHRKASSEKNVLIFDLGGGTFDVSLLTIGK----GIFKVKATAGDTHLGGEDFDNRMV 242 (675)
Q Consensus 167 ~~Agl~~v~li~Ep~Aaa~~~~~~~~~~~~~~vlvvDiGggT~dvsv~~~~~----~~~~~l~~~~~~~~GG~~id~~i~ 242 (675)
+.|||+.+++++||+|||++|+..... .+..++|||+||||||++++++.+ +.++++++.++..+||++||+.|+
T Consensus 159 ~~AGl~v~~li~EP~AAAlaygl~~~~-~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~~l~ 237 (605)
T 4b9q_A 159 RIAGLEVKRIINEPTAAALAYGLDKGT-GNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLI 237 (605)
T ss_dssp HHTTCEEEEEEEHHHHHHHHHHTTSCC-SSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHHHHH
T ss_pred HHcCCceEEEeCcHHHHHHHhhhhccC-CCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHHHHH
Confidence 999999999999999999999876642 578999999999999999999988 899999999999999999999999
Q ss_pred HHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHccCCCceEEEEecccC----CceeEEEEeHHHHHHHHHHHHHHHH
Q 005824 243 NHFIQEFKRKKKKDISGSPRAVQRLTTACERAKRTLSSTSQTTIEIDSLYE----GIDFSSVITRARFEELNMDLFRKCI 318 (675)
Q Consensus 243 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~~~i~~~~~----~~~~~~~itr~~~~~~~~~~~~~i~ 318 (675)
+++.++|+++++.++..+++.+.+|+.+||++|+.|+......+.++.+.. +.++.+.|+|++|+++++++++++.
T Consensus 238 ~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~~~~i~ 317 (605)
T 4b9q_A 238 NYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSI 317 (605)
T ss_dssp HHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHHHHHHHHHHHHHHH
Confidence 999999999988888889999999999999999999999988888876543 3578899999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCccEEEEecCCcChHHHHHHHHHhcCCCcccccCCchhhHHhHHHHHHHHHcCCCCCCccceEEE
Q 005824 319 KHVDMCLRNGKMDKSRVDDVVIVGGSARIPKVQQLLQEFFNGKRLCQNINPDEAVAYGAAVQAAVLSGNRSDKVEDTVVL 398 (675)
Q Consensus 319 ~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~~~~~~~~~~~~~ 398 (675)
..++++|+++++...+|+.|+|+||+|++|+|++.|++.| +.++....||++|||.|||++|+.++++ .+++++.
T Consensus 318 ~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~f-g~~~~~~~nPdeaVA~GAai~a~~l~~~----~~~~~l~ 392 (605)
T 4b9q_A 318 EPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLL 392 (605)
T ss_dssp HHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHH-TSCCCSSSCTTTHHHHHHHHHHHHHHTS----SCSEEEE
T ss_pred HHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHh-ccCcCCCcChhHHHHHhHHHHHHHhcCC----CCceEEE
Confidence 9999999999999899999999999999999999999999 7888999999999999999999999984 5789999
Q ss_pred EeccCCCCCC
Q 005824 399 DVNSKYNSSL 408 (675)
Q Consensus 399 d~~p~~~~~~ 408 (675)
|++|+++|..
T Consensus 393 dv~p~slgie 402 (605)
T 4b9q_A 393 DVTPLSLGIE 402 (605)
T ss_dssp CBCSSCEEEE
T ss_pred eeeeeEEEEE
Confidence 9999999853
No 4
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=9.8e-60 Score=508.98 Aligned_cols=380 Identities=71% Similarity=1.115 Sum_probs=359.8
Q ss_pred CCcEEEEecccccEEEEEEECCeEEEEecCCCCcccceEEEEeCCceeecHHHHHHhhhCcCchhhcchhhhCCCCCChh
Q 005824 6 GVLGIGIDLGTTYSCVGVWQHNRVEIIANDQGNRTTPSYVAFTKKERFAGNAAKNQLAMNPTNTVFDAKRLIGRRFSDVS 85 (675)
Q Consensus 6 ~~~viGID~GTt~s~va~~~~g~~~~l~~~~g~~~~PS~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 85 (675)
.+.+||||||||||++|++.+|.++++.++.|++++||+|+|.++++++|..|......+|.++++++|+++|++++++.
T Consensus 22 ~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~Kr~lg~~~~~~~ 101 (404)
T 3i33_A 22 SMPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDAT 101 (404)
T ss_dssp -CCCEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECCEEECSSCEEETHHHHHTTTTCSTTEECCGGGTTTCCTTSHH
T ss_pred cCCEEEEEcCCccEEEEEEECCeeEEEECCCCCcccceEEEECCCCEEecHHHHHhhHhChhhhHHHHHHHhCCCCCcHH
Confidence 34899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcccCCeEEEeCCCCCceEEEEEcCceeeeeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHH
Q 005824 86 VQEDIKLWPFKVIAGPNDKPMIAVKYKGGEKKYAAEDISSMVLAKMREIAKAYLGSNVKNAVVTVPAYFTDSQRQATKDA 165 (675)
Q Consensus 86 v~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~l~~a 165 (675)
++...+.+||.+. ..++++.+.+.+.+....++++++++++|++|++.++..++..+.++|||||++|++.+|++|++|
T Consensus 102 ~~~~~~~~p~~~~-~~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~~a 180 (404)
T 3i33_A 102 VQSDMKHWPFRVV-SEGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDA 180 (404)
T ss_dssp HHHHHTTCSSEEE-EETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHhhCCceEE-ccCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhccCCCcEEEEECCCCCHHHHHHHHHH
Confidence 9999999999987 477888899988887789999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCceeEeeChhHHHHHHhccccCCC--CCceEEEEEeCCCcEEEEEEEEeCCEEEEEEEcCCCCCcHHHHHHHHHH
Q 005824 166 GAMAGLNVLKIISEPTAAAIAYGLHRKAS--SEKNVLIFDLGGGTFDVSLLTIGKGIFKVKATAGDTHLGGEDFDNRMVN 243 (675)
Q Consensus 166 ~~~Agl~~v~li~Ep~Aaa~~~~~~~~~~--~~~~vlvvDiGggT~dvsv~~~~~~~~~~l~~~~~~~~GG~~id~~i~~ 243 (675)
++.||++.+.+++||+|||++|+...... .+..++|||+||||||++++++.++.+++++..++..+||++||+.|.+
T Consensus 181 ~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~ 260 (404)
T 3i33_A 181 GTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 260 (404)
T ss_dssp HHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHH
T ss_pred HHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCCCCHHHHHHHHHH
Confidence 99999999999999999999998776533 6789999999999999999999999999999999899999999999999
Q ss_pred HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHccCCCceEEEEecccCCceeEEEEeHHHHHHHHHHHHHHHHHHHHH
Q 005824 244 HFIQEFKRKKKKDISGSPRAVQRLTTACERAKRTLSSTSQTTIEIDSLYEGIDFSSVITRARFEELNMDLFRKCIKHVDM 323 (675)
Q Consensus 244 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~i~~ 323 (675)
++.++|.++++.++..+++.+.+|+.++|++|+.|+......+.++.+.++.++.+.|+|++|+++++++++++.+.+++
T Consensus 261 ~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~g~~~~~~i~r~~~~~~~~~~~~~i~~~i~~ 340 (404)
T 3i33_A 261 HLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEK 340 (404)
T ss_dssp HHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHTHHHHHH
T ss_pred HHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEEeeccCCceeEEEEcHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888889999999999999999999999999999998888999999999999999999999999999999
Q ss_pred HHHcCCCCCCCccEEEEecCCcChHHHHHHHHHhcCCCcccccCCchhhHHhHHHHHHHHHcC
Q 005824 324 CLRNGKMDKSRVDDVVIVGGSARIPKVQQLLQEFFNGKRLCQNINPDEAVAYGAAVQAAVLSG 386 (675)
Q Consensus 324 ~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 386 (675)
+|+.++....+++.|+|+||+|++|+|++.|++.|++.++..+.||++|||.|||++|+.+++
T Consensus 341 ~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 341 ALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIG 403 (404)
T ss_dssp HHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHHHHC-
T ss_pred HHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence 999998888899999999999999999999999998889999999999999999999999886
No 5
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=5.6e-61 Score=539.78 Aligned_cols=391 Identities=48% Similarity=0.778 Sum_probs=359.6
Q ss_pred cEEEEecccccEEEEEEECCeEEEEecCCCCcccceEEEEeC-CceeecHHHHHHhhhCcCchhhcchhhhCCCCCChhh
Q 005824 8 LGIGIDLGTTYSCVGVWQHNRVEIIANDQGNRTTPSYVAFTK-KERFAGNAAKNQLAMNPTNTVFDAKRLIGRRFSDVSV 86 (675)
Q Consensus 8 ~viGID~GTt~s~va~~~~g~~~~l~~~~g~~~~PS~v~~~~-~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~v 86 (675)
.+||||||||||++|++.+|.++++.++.|++.+||+|+|.+ +++++|..|..+...+|+++++++|+++|+.++++.+
T Consensus 3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~~~d~~v 82 (605)
T 2kho_A 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEV 82 (605)
T ss_dssp -CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTTCBSSSTTH
T ss_pred CEEEEEcCCcCEEEEEEECCEEEEEECCCCCcccceEEEEECCCcEEECHHHHHHhhhCCCCEeehhhHhhCCCCCcHHH
Confidence 579999999999999999999999999999999999999965 5789999999999999999999999999999988888
Q ss_pred hhhcccCCeEEEeCCCCCceEEEEEcCceeeeeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHHH
Q 005824 87 QEDIKLWPFKVIAGPNDKPMIAVKYKGGEKKYAAEDISSMVLAKMREIAKAYLGSNVKNAVVTVPAYFTDSQRQATKDAG 166 (675)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~l~~a~ 166 (675)
+...+.+||.+..+.++...+.+ + +..++++++++++|++|++.++.+++.++.++|||||++|++.||+++++|+
T Consensus 83 ~~~~~~~p~~~~~~~~g~~~i~~--~--g~~~~~~ei~a~~L~~l~~~ae~~l~~~v~~~VitVPa~f~d~qr~a~~~A~ 158 (605)
T 2kho_A 83 QRDVSIMPFKIIAADNGDAWVEV--K--GQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAG 158 (605)
T ss_dssp HHHHHHCSSCEEECTTSBEEEEE--T--TEEECHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHhhcCCeEEEECCCCceEEEE--C--CEEEcHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEECCCCCHHHHHHHHHHH
Confidence 88888899998877777776665 3 3688999999999999999999999988999999999999999999999999
Q ss_pred HHcCCceeEeeChhHHHHHHhccccCCCCCceEEEEEeCCCcEEEEEEEEe----CCEEEEEEEcCCCCCcHHHHHHHHH
Q 005824 167 AMAGLNVLKIISEPTAAAIAYGLHRKASSEKNVLIFDLGGGTFDVSLLTIG----KGIFKVKATAGDTHLGGEDFDNRMV 242 (675)
Q Consensus 167 ~~Agl~~v~li~Ep~Aaa~~~~~~~~~~~~~~vlvvDiGggT~dvsv~~~~----~~~~~~l~~~~~~~~GG~~id~~i~ 242 (675)
+.||++.+++++||+|||++|+.+... .+..+||||+||||||++++++. ++.++++++.++..+||++||+.|+
T Consensus 159 ~~AGl~v~~li~EP~AAAlay~l~~~~-~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~~l~ 237 (605)
T 2kho_A 159 RIAGLEVKRIINEPTAAALAYGLDKGT-GNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLI 237 (605)
T ss_dssp HTTTCEEEEEEEHHHHHHHHTTTTSSS-SEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHHHHH
T ss_pred HHcCCceEEEecCHHHHHHHhhhcccC-CCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHHHHH
Confidence 999999999999999999999876542 57899999999999999999998 7899999999989999999999999
Q ss_pred HHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHccCCCceEEEEecccC---C-ceeEEEEeHHHHHHHHHHHHHHHH
Q 005824 243 NHFIQEFKRKKKKDISGSPRAVQRLTTACERAKRTLSSTSQTTIEIDSLYE---G-IDFSSVITRARFEELNMDLFRKCI 318 (675)
Q Consensus 243 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~~~i~~~~~---~-~~~~~~itr~~~~~~~~~~~~~i~ 318 (675)
+++.++|+++++.++..+++.+.+|+.+||++|+.|+......+.++.+.+ | .++.+.|+|++|+++++++++++.
T Consensus 238 ~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~ 317 (605)
T 2kho_A 238 NYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSI 317 (605)
T ss_dssp HHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHTTCCSTTGGGT
T ss_pred HHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEecccccCCCCceEEEEEEeHHHHHHHHHHHHHHHH
Confidence 999999999888888889999999999999999999999888888876554 2 466789999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCccEEEEecCCcChHHHHHHHHHhcCCCcccccCCchhhHHhHHHHHHHHHcCCCCCCccceEEE
Q 005824 319 KHVDMCLRNGKMDKSRVDDVVIVGGSARIPKVQQLLQEFFNGKRLCQNINPDEAVAYGAAVQAAVLSGNRSDKVEDTVVL 398 (675)
Q Consensus 319 ~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~~~~~~~~~~~~~ 398 (675)
+.++++|+++++...+|+.|+|+||+|++|+|++.|++.| +.++....||++|||.||+++|+.++++ ++++++.
T Consensus 318 ~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f-g~~~~~~~npd~aVA~GAa~~a~~l~~~----~~~~~l~ 392 (605)
T 2kho_A 318 EPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLL 392 (605)
T ss_dssp SHHHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHH-SSCCBCSSCTTTHHHHHHHHHHTTTTTS----CCCCCCS
T ss_pred HHHHHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhc-CCCcCcCCCcchHHHHHHHHHHHHhcCC----ccCceEE
Confidence 9999999999988889999999999999999999999999 6888889999999999999999998874 5788999
Q ss_pred EeccCCCCCC
Q 005824 399 DVNSKYNSSL 408 (675)
Q Consensus 399 d~~p~~~~~~ 408 (675)
|++|+++|..
T Consensus 393 dv~p~slgi~ 402 (605)
T 2kho_A 393 DVTPLSLGIE 402 (605)
T ss_dssp BCCCCCEEEE
T ss_pred eeeeeecccc
Confidence 9999998853
No 6
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=1.9e-58 Score=497.56 Aligned_cols=376 Identities=60% Similarity=0.974 Sum_probs=357.7
Q ss_pred cEEEEecccccEEEEEEECCeEEEEecCCCCcccceEEEEeCCceeecHHHHHHhhhCcCchhhcchhhhCCCCCChhhh
Q 005824 8 LGIGIDLGTTYSCVGVWQHNRVEIIANDQGNRTTPSYVAFTKKERFAGNAAKNQLAMNPTNTVFDAKRLIGRRFSDVSVQ 87 (675)
Q Consensus 8 ~viGID~GTt~s~va~~~~g~~~~l~~~~g~~~~PS~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~v~ 87 (675)
.+||||||||+|++|++.+|.++++.++.|++++||+|+|.++++++|+.|......+|.++++++|+++|++++++.++
T Consensus 19 ~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~~ 98 (394)
T 3qfu_A 19 TVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDDERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDRSVQ 98 (394)
T ss_dssp SCEEEEECSSEEEEEEECSSCEEECCCTTSCSSEECCEEECSSCEEESHHHHHTGGGCGGGEECCGGGTTTCCTTCHHHH
T ss_pred CEEEEEeCcCcEEEEEEECCeeEEEECCCCCEeeceEEEEeCCcEEecHHHHHhhHhCcccCHHHHHHHhCCCCCcHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCeEEEeCCCCCceEEEEEcCceeeeeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHHHH
Q 005824 88 EDIKLWPFKVIAGPNDKPMIAVKYKGGEKKYAAEDISSMVLAKMREIAKAYLGSNVKNAVVTVPAYFTDSQRQATKDAGA 167 (675)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~l~~a~~ 167 (675)
...+.+||.+. +.++.+.+.+.+.+....++++++++++|++|++.++.+++..+.++|+|||++|++.+|+++++|++
T Consensus 99 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~~ 177 (394)
T 3qfu_A 99 KDIKHLPFNVV-NKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAGT 177 (394)
T ss_dssp HHHTTCSSEEE-EETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred HHhhcCCeEEE-cCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcCCCcceEEEEECCCCCHHHHHHHHHHHH
Confidence 99999999988 77888888888888788999999999999999999999999999999999999999999999999999
Q ss_pred HcCCceeEeeChhHHHHHHhccccCCCCCceEEEEEeCCCcEEEEEEEEeCCEEEEEEEcCCCCCcHHHHHHHHHHHHHH
Q 005824 168 MAGLNVLKIISEPTAAAIAYGLHRKASSEKNVLIFDLGGGTFDVSLLTIGKGIFKVKATAGDTHLGGEDFDNRMVNHFIQ 247 (675)
Q Consensus 168 ~Agl~~v~li~Ep~Aaa~~~~~~~~~~~~~~vlvvDiGggT~dvsv~~~~~~~~~~l~~~~~~~~GG~~id~~i~~~l~~ 247 (675)
.||++.+.+++||+|||++|+.... ..+..++|||+||||||++++++.++.+++++..++..+||++||+.|.+++.+
T Consensus 178 ~aGl~~~~li~Ep~Aaa~~~~~~~~-~~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l~~ 256 (394)
T 3qfu_A 178 IAGLNVLRIVNEPTAAAIAYGLDKS-DKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQLIK 256 (394)
T ss_dssp HTTCEEEEEEEHHHHHHHHTTTTSC-SSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHH
T ss_pred HcCCceEEEecCHHHHHHHHhhccC-CCCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCChHHHHHHHHHHHHH
Confidence 9999999999999999999976654 367899999999999999999999999999999998999999999999999999
Q ss_pred HHHhhccCCCCCCHHHHHHHHHHHHHHHHHccCCCceEEEEecccCCceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHHc
Q 005824 248 EFKRKKKKDISGSPRAVQRLTTACERAKRTLSSTSQTTIEIDSLYEGIDFSSVITRARFEELNMDLFRKCIKHVDMCLRN 327 (675)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~i~~~l~~ 327 (675)
+|.++++.++..+++...+|+.++|++|+.|+......+.++.+.++.++...++|++|+++++++++++.+.++++|+.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~~~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~l~~ 336 (394)
T 3qfu_A 257 AFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDGIDLSETLTRAKFEELNLDLFKKTLKPVEKVLQD 336 (394)
T ss_dssp HHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEETTEEEEEEEEHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEEEEeccCCceeEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888899999999999999999999999999999888889999999999999999999999999999999999
Q ss_pred CCCCCCCccEEEEecCCcChHHHHHHHHHhcCCCcccccCCchhhHHhHHHHHHHHHc
Q 005824 328 GKMDKSRVDDVVIVGGSARIPKVQQLLQEFFNGKRLCQNINPDEAVAYGAAVQAAVLS 385 (675)
Q Consensus 328 ~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~ 385 (675)
++....+++.|+|+||+|++|+|++.|++.|++.++..+.||++|||.||+++|+.++
T Consensus 337 ~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 337 SGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp HTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHHC
T ss_pred cCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 9888888999999999999999999999999888999999999999999999999864
No 7
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=5.9e-57 Score=487.70 Aligned_cols=377 Identities=31% Similarity=0.539 Sum_probs=338.3
Q ss_pred CcEEEEecccccEEEEEEECCeEEEEecCCCCcccceEEEEeCCceeecHHHHHHhhhCcCchhhcchhhhCCCCCChhh
Q 005824 7 VLGIGIDLGTTYSCVGVWQHNRVEIIANDQGNRTTPSYVAFTKKERFAGNAAKNQLAMNPTNTVFDAKRLIGRRFSDVSV 86 (675)
Q Consensus 7 ~~viGID~GTt~s~va~~~~g~~~~l~~~~g~~~~PS~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~v 86 (675)
+.+||||||||+|++|++.+|.++++.++.|.+++||+|+|.++++++|..|..+...+|.+++.++|+++|++.++..+
T Consensus 13 ~~vvGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~G~~A~~~~~~~~~~~i~~~K~llg~~~~~~~~ 92 (409)
T 4gni_A 13 RVVIGITFGNSNSSIAHTVDDKAEVIANEDGDRQIPTILSYVDGDEYYGQQAKNFLVRNPKNTVAYFRDILGQDFKSVDP 92 (409)
T ss_dssp CCEEEEEECSSEEEEEEEETTEEEEECCTTSCSSEECEEEEETTEEEEHHHHHHHHHHCGGGEEESCGGGTTCCGGGCCC
T ss_pred CcEEEEEcCCCeEEEEEEeCCceEEEECCCCCccCceEEEECCCcEEEcHHHHHhhHhChHhhHHHHHHHhCCCccchhh
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999998877654
Q ss_pred hhhcccCCeEEEeCCCCCceEEEEEc----CceeeeeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHH
Q 005824 87 QEDIKLWPFKVIAGPNDKPMIAVKYK----GGEKKYAAEDISSMVLAKMREIAKAYLGSNVKNAVVTVPAYFTDSQRQAT 162 (675)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~v~~~----~~~~~~~~~~l~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~l 162 (675)
+... .++.+. +.++...+.+... +....++++++++++|++|++.++..++..+.++|+|||++|++.+|++|
T Consensus 93 ~~~~--~~~~~~-~~~g~~~~~v~~~~~~~~~~~~~~~~ev~~~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~ 169 (409)
T 4gni_A 93 THNH--ASAHPQ-EAGDNVVFTIKDKAEEDAEPSTLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNFTEKQKAAL 169 (409)
T ss_dssp GGGT--TSCCCE-EETTEEEEEECCSSCSSCCCEEEEHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHH
T ss_pred hhhc--ccccee-cCCCcEEEEEecCCCCCCcceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHH
Confidence 4332 233222 3455566665543 35578999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCceeEeeChhHHHHHHhcccc-CCCCCceEEEEEeCCCcEEEEEEEEeCCEEEEEEEcCCCCCcHHHHHHHH
Q 005824 163 KDAGAMAGLNVLKIISEPTAAAIAYGLHR-KASSEKNVLIFDLGGGTFDVSLLTIGKGIFKVKATAGDTHLGGEDFDNRM 241 (675)
Q Consensus 163 ~~a~~~Agl~~v~li~Ep~Aaa~~~~~~~-~~~~~~~vlvvDiGggT~dvsv~~~~~~~~~~l~~~~~~~~GG~~id~~i 241 (675)
++|++.||++.+.+++||+|||++|+... ....+..++|||+||||||++++++.++.+++++..++..+||++||+.|
T Consensus 170 ~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~i 249 (409)
T 4gni_A 170 IAAAAAADLEVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDKVL 249 (409)
T ss_dssp HHHHHHTTCEEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHHHH
T ss_pred HHHHHHcCCCeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHHHH
Confidence 99999999999999999999999998764 23478899999999999999999999999999999888999999999999
Q ss_pred HHHHHHHHHhhcc--CCCCCCHHHHHHHHHHHHHHHHHccCCCceEEEEecccCCceeEEEEeHHHHHHHHHHHHHHHHH
Q 005824 242 VNHFIQEFKRKKK--KDISGSPRAVQRLTTACERAKRTLSSTSQTTIEIDSLYEGIDFSSVITRARFEELNMDLFRKCIK 319 (675)
Q Consensus 242 ~~~l~~~~~~~~~--~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~ 319 (675)
++++.++|..+++ .+...+++.+.+|+.+||++|+.|+......+.++.+.++.++...|+|++|+++++++++++.+
T Consensus 250 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~ 329 (409)
T 4gni_A 250 IDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVESLIDGLDFASTINRLRYETIARTVFEGFNR 329 (409)
T ss_dssp HHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCCCceEEEeecccCCcceEEEeeHHHHHHHHHHHHHHHHH
Confidence 9999999998887 66777899999999999999999999999999999888999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCccEEEEecCCcChHHHHHHHHHhcCCC-cc------cccCCchhhHHhHHHHHHHHHcC
Q 005824 320 HVDMCLRNGKMDKSRVDDVVIVGGSARIPKVQQLLQEFFNGK-RL------CQNINPDEAVAYGAAVQAAVLSG 386 (675)
Q Consensus 320 ~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~-~v------~~~~~p~~ava~Gaa~~a~~l~~ 386 (675)
.|+++|++++....+++.|+|+||+|++|+|++.|++.|+.. ++ ....||++|||+|||++++....
T Consensus 330 ~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~~~ 403 (409)
T 4gni_A 330 LVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQASLIQE 403 (409)
T ss_dssp HHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHHHHhhhhhh
Confidence 999999999988889999999999999999999999999543 34 56789999999999999998654
No 8
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=2.4e-56 Score=493.80 Aligned_cols=365 Identities=47% Similarity=0.788 Sum_probs=333.6
Q ss_pred cEEEEecccccEEEEEEECCeEEEEecCCCCcccceEEEEeCCceeecHHHHHHhhhCcCchhhcchhhhCCCCCChhhh
Q 005824 8 LGIGIDLGTTYSCVGVWQHNRVEIIANDQGNRTTPSYVAFTKKERFAGNAAKNQLAMNPTNTVFDAKRLIGRRFSDVSVQ 87 (675)
Q Consensus 8 ~viGID~GTt~s~va~~~~g~~~~l~~~~g~~~~PS~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~v~ 87 (675)
.+||||||||||++|++.+|.+++++++.|++.+||+|+|.++++++|++|..+...+| ++++++|+++|+++.
T Consensus 3 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p-~~~~~~Kr~lg~p~~----- 76 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFKNGERLVGEVAKRQAITNP-NTIISIKRHMGTDYK----- 76 (509)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEESSSSEEESHHHHTTTTTCS-SEEECGGGTTTSCCC-----
T ss_pred CEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEECCCcEEECHHHHHhHHhCC-CcHHHHHHhcCCCcE-----
Confidence 58999999999999999999999999999999999999997778999999999998999 999999999987331
Q ss_pred hhcccCCeEEEeCCCCCceEEEEEcCceeeeeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHHHH
Q 005824 88 EDIKLWPFKVIAGPNDKPMIAVKYKGGEKKYAAEDISSMVLAKMREIAKAYLGSNVKNAVVTVPAYFTDSQRQATKDAGA 167 (675)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~l~~a~~ 167 (675)
+ ..++ ..++++++++++|++|++.++..++.++.++|+|||++|++.||+++++|++
T Consensus 77 ---------~------------~~~g--~~~~~~ei~a~~L~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a~~ 133 (509)
T 2v7y_A 77 ---------V------------EIEG--KQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGR 133 (509)
T ss_dssp ---------E------------EETT--EEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred ---------E------------EECC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 1 1122 4678999999999999999999999888999999999999999999999999
Q ss_pred HcCCceeEeeChhHHHHHHhccccCCCCCceEEEEEeCCCcEEEEEEEEeCCEEEEEEEcCCCCCcHHHHHHHHHHHHHH
Q 005824 168 MAGLNVLKIISEPTAAAIAYGLHRKASSEKNVLIFDLGGGTFDVSLLTIGKGIFKVKATAGDTHLGGEDFDNRMVNHFIQ 247 (675)
Q Consensus 168 ~Agl~~v~li~Ep~Aaa~~~~~~~~~~~~~~vlvvDiGggT~dvsv~~~~~~~~~~l~~~~~~~~GG~~id~~i~~~l~~ 247 (675)
.||++.+.+++||+|||++|+.+.. .+.+++|||+||||||++++++.++.++++++.++..+||++||+.|++++.+
T Consensus 134 ~AGl~~~~li~Ep~AAAlay~~~~~--~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~ 211 (509)
T 2v7y_A 134 IAGLEVERIINEPTAAALAYGLDKE--EDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVN 211 (509)
T ss_dssp HTTCEEEEEEEHHHHHHHHTTGGGS--CSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHH
T ss_pred HcCCCeEEEecCHHHHHHHHhhccC--CCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHHHH
Confidence 9999999999999999999988764 67899999999999999999999899999999898999999999999999999
Q ss_pred HHHhhccCCCCCCHHHHHHHHHHHHHHHHHccCCCceEEEEecccC---C-ceeEEEEeHHHHHHHHHHHHHHHHHHHHH
Q 005824 248 EFKRKKKKDISGSPRAVQRLTTACERAKRTLSSTSQTTIEIDSLYE---G-IDFSSVITRARFEELNMDLFRKCIKHVDM 323 (675)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~~~i~~~~~---~-~~~~~~itr~~~~~~~~~~~~~i~~~i~~ 323 (675)
+|+++++.++..+++.+.+|+.+||++|+.|+......+.++.+.+ | .++.+.|+|++|+++++|+++++.+.+++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i~~ 291 (509)
T 2v7y_A 212 QFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGPVRQ 291 (509)
T ss_dssp HHHHHHSCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHTHHHHHTTHHHHHH
T ss_pred HHHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEeccccCCCCCeeEEEEEEHHHHHHHHHHHHHHHHHHHHH
Confidence 9998888887778899999999999999999999888888876543 2 45677999999999999999999999999
Q ss_pred HHHcCCCCCCCccEEEEecCCcChHHHHHHHHHhcCCCcccccCCchhhHHhHHHHHHHHHcCCCCCCccceEEEEeccC
Q 005824 324 CLRNGKMDKSRVDDVVIVGGSARIPKVQQLLQEFFNGKRLCQNINPDEAVAYGAAVQAAVLSGNRSDKVEDTVVLDVNSK 403 (675)
Q Consensus 324 ~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~~~~~~~~~~~~~d~~p~ 403 (675)
+|+++++...+++.|+|+||+|++|+|++.|++.| +.++....||++|||.||+++++.++++ ++++.+.|++|+
T Consensus 292 ~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f-~~~~~~~~~p~~aVa~Gaa~~a~~l~~~----~~~~~~~dv~p~ 366 (509)
T 2v7y_A 292 ALQDAGLTPADIDKVILVGGSTRIPAVQEAIKREL-GKEPHKGVNPDEVVAIGAAIQGGVIAGE----VKDVVLLDVTPL 366 (509)
T ss_dssp HHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHH-SSCCBCCSCTTTHHHHHHHHHHHHHHTC----CCCCCCCCBCSS
T ss_pred HHHHcCCChhHCcEEEEECCcccChHHHHHHHHHh-CCCcCcCCCchhhhHhhHHHHHHHhcCC----ccCceEEEeecc
Confidence 99999888889999999999999999999999999 6788889999999999999999999884 567889999999
Q ss_pred CCCCC
Q 005824 404 YNSSL 408 (675)
Q Consensus 404 ~~~~~ 408 (675)
++|..
T Consensus 367 slgi~ 371 (509)
T 2v7y_A 367 SLGIE 371 (509)
T ss_dssp EEEEE
T ss_pred cccee
Confidence 98853
No 9
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=1.5e-55 Score=472.79 Aligned_cols=371 Identities=49% Similarity=0.804 Sum_probs=335.8
Q ss_pred cEEEEecccccEEEEEEECCeEEEEecCCCCcccceEEEEeC-CceeecHHHHHHhhhCcCchhhcchhhhCCCCCChhh
Q 005824 8 LGIGIDLGTTYSCVGVWQHNRVEIIANDQGNRTTPSYVAFTK-KERFAGNAAKNQLAMNPTNTVFDAKRLIGRRFSDVSV 86 (675)
Q Consensus 8 ~viGID~GTt~s~va~~~~g~~~~l~~~~g~~~~PS~v~~~~-~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~v 86 (675)
.+||||||||||+++++.+|.++++.+++|.+.+||+|+|.+ ++++||+.|......+|+++++++|+++|+.++++.+
T Consensus 3 ~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~ 82 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEV 82 (383)
T ss_dssp CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTTCBSCSHHH
T ss_pred cEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECCCCEEECHHHHHhhhhCccceeehhHHhhCCCCCcHHH
Confidence 579999999999999999999999999999999999999975 5788999999999999999999999999999988888
Q ss_pred hhhcccCCeEEEeCCCCCceEEEEEcCceeeeeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHHH
Q 005824 87 QEDIKLWPFKVIAGPNDKPMIAVKYKGGEKKYAAEDISSMVLAKMREIAKAYLGSNVKNAVVTVPAYFTDSQRQATKDAG 166 (675)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~l~~a~ 166 (675)
+...+.+||.+..+.++...+.+ ++ ..++++++++++|+++++.++..++.++.++|+|||++|++.+|+++++|+
T Consensus 83 ~~~~~~~p~~~~~~~~~~~~~~~--~g--~~~~~~~i~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~ 158 (383)
T 1dkg_D 83 QRDVSIMPFKIIAADNGDAWVEV--KG--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAG 158 (383)
T ss_dssp HHHTTTCSSEEEECSSSBEEEEE--TT--EEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHHHHHHHHH
T ss_pred HHHhhcCCeEEEEcCCCcEEEEE--CC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 88888899998777777666655 33 578999999999999999999999888889999999999999999999999
Q ss_pred HHcCCceeEeeChhHHHHHHhccccCCCCCceEEEEEeCCCcEEEEEEEEe----CCEEEEEEEcCCCCCcHHHHHHHHH
Q 005824 167 AMAGLNVLKIISEPTAAAIAYGLHRKASSEKNVLIFDLGGGTFDVSLLTIG----KGIFKVKATAGDTHLGGEDFDNRMV 242 (675)
Q Consensus 167 ~~Agl~~v~li~Ep~Aaa~~~~~~~~~~~~~~vlvvDiGggT~dvsv~~~~----~~~~~~l~~~~~~~~GG~~id~~i~ 242 (675)
+.||++.+.+++||+|||++|+.... ..+.+++|+|+||||||+++++.. ++.+++++..++..+||++||+.|.
T Consensus 159 ~~aGl~~~~li~Ep~Aaa~~~~~~~~-~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~id~~l~ 237 (383)
T 1dkg_D 159 RIAGLEVKRIINEPTAAALAYGLDKG-TGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLI 237 (383)
T ss_dssp HHTTCEESCCCBHHHHHHHHHTCCC--CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHHHHH
T ss_pred HHcCCceEEEeccHHHHHHHHHhccC-CCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHHHHHHHH
Confidence 99999999999999999999987643 256799999999999999999998 5677888888888999999999999
Q ss_pred HHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHccCCCceEEEEecccC---C-ceeEEEEeHHHHHHHHHHHHHHHH
Q 005824 243 NHFIQEFKRKKKKDISGSPRAVQRLTTACERAKRTLSSTSQTTIEIDSLYE---G-IDFSSVITRARFEELNMDLFRKCI 318 (675)
Q Consensus 243 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~~~i~~~~~---~-~~~~~~itr~~~~~~~~~~~~~i~ 318 (675)
+++.+++..+++.++..+++.+.+|+.++|++|+.|+......+.++.+.+ | .++.+.|++++|+++++|+++++.
T Consensus 238 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~G~~~~~~~it~~~~~~~~~~~~~~i~ 317 (383)
T 1dkg_D 238 NYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSI 317 (383)
T ss_dssp HHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEecccccCCCCeeEEEEEeHHHHHHHHHHHHHHHH
Confidence 999999998888888888999999999999999999988888888775543 3 455679999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCccEEEEecCCcChHHHHHHHHHhcCCCcccccCCchhhHHhHHHHHHHHH
Q 005824 319 KHVDMCLRNGKMDKSRVDDVVIVGGSARIPKVQQLLQEFFNGKRLCQNINPDEAVAYGAAVQAAVL 384 (675)
Q Consensus 319 ~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l 384 (675)
+.++++|+++++...+++.|+|+||+|++|+|++.|++.| +.++..+.||++|||.||+++|+.+
T Consensus 318 ~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~-~~~v~~~~~p~~ava~Gaa~~a~~l 382 (383)
T 1dkg_D 318 ELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVL 382 (383)
T ss_dssp HHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHH-SSCCBCSSCTTTHHHHHHHHHTTTT
T ss_pred HHHHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHh-CCCCCCCcChHHHHHHHHHHHHHhh
Confidence 9999999999888788999999999999999999999999 6788888999999999999999765
No 10
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=1.1e-38 Score=336.68 Aligned_cols=309 Identities=24% Similarity=0.349 Sum_probs=236.6
Q ss_pred cEEEEecccccEEEEEEECCeEEEEecCCCCcccceEEEEeCC--c-eeecHHHHHHhhhCcCchhhcchhhhCCCCCCh
Q 005824 8 LGIGIDLGTTYSCVGVWQHNRVEIIANDQGNRTTPSYVAFTKK--E-RFAGNAAKNQLAMNPTNTVFDAKRLIGRRFSDV 84 (675)
Q Consensus 8 ~viGID~GTt~s~va~~~~g~~~~l~~~~g~~~~PS~v~~~~~--~-~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~ 84 (675)
.+|||||||+++++++..++ .++ .+||+|+|.++ + .++|++|......+|.++...
T Consensus 4 ~~igIDlGT~~s~v~~~~~~--~~~-------~~PS~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~~~------------ 62 (344)
T 1jce_A 4 KDIGIDLGTANTLVFLRGKG--IVV-------NEPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKAI------------ 62 (344)
T ss_dssp CEEEEEECSSEEEEEETTTE--EEE-------EEESCEEEETTTCCEEEESHHHHTTTTCCCTTEEEE------------
T ss_pred ceEEEEcCcCcEEEEECCCC--EEE-------eeCcEEEEecCCCcEEEEcHHHHHhcccCCCCeEEE------------
Confidence 57999999999999875333 233 37999999876 3 469999988766666554210
Q ss_pred hhhhhcccCCeEEEeCCCCCceEEEEEcCceeee-eHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHH
Q 005824 85 SVQEDIKLWPFKVIAGPNDKPMIAVKYKGGEKKY-AAEDISSMVLAKMREIAKAYLGSNVKNAVVTVPAYFTDSQRQATK 163 (675)
Q Consensus 85 ~v~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~l~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~l~ 163 (675)
.|++ ++ . + ..+ .+++++++++++++.. ..++ ...+|+|+|++|++.+|++++
T Consensus 63 --------~p~~-----~g--~--i------~~~~~~~~i~~~~l~~~~~~--~~~~--~~~~vitvP~~~~~~~r~~~~ 115 (344)
T 1jce_A 63 --------RPMR-----DG--V--I------ADYTVALVMLRYFINKAKGG--MNLF--KPRVVIGVPIGITDVERRAIL 115 (344)
T ss_dssp --------CCEE-----TT--E--E------SSHHHHHHHHHHHHHHHHTS--CCSC--CCEEEEEECTTCCHHHHHHHH
T ss_pred --------ecCC-----CC--e--e------CChHHHHHHHHHHHHHHhhc--cccC--CCeEEEEECCCCCHHHHHHHH
Confidence 1211 00 0 0 011 2455555555554331 1122 368999999999999999999
Q ss_pred HHHHHcCCceeEeeChhHHHHHHhccccCCCCCceEEEEEeCCCcEEEEEEEEeCCEEEEEEEcCCCCCcHHHHHHHHHH
Q 005824 164 DAGAMAGLNVLKIISEPTAAAIAYGLHRKASSEKNVLIFDLGGGTFDVSLLTIGKGIFKVKATAGDTHLGGEDFDNRMVN 243 (675)
Q Consensus 164 ~a~~~Agl~~v~li~Ep~Aaa~~~~~~~~~~~~~~vlvvDiGggT~dvsv~~~~~~~~~~l~~~~~~~~GG~~id~~i~~ 243 (675)
+|++.||++.+.+++||+|||++|+.... .+.+++|||+||||||+++++.+. ....++..+||++||+.|.+
T Consensus 116 ~a~~~aG~~~~~li~ep~Aaa~~~~~~~~--~~~~~lVvDiGggttdvsv~~~~~-----~~~~~~~~lGG~~id~~l~~ 188 (344)
T 1jce_A 116 DAGLEAGASKVFLIEEPMAAAIGSNLNVE--EPSGNMVVDIGGGTTEVAVISLGS-----IVTWESIRIAGDEMDEAIVQ 188 (344)
T ss_dssp HHHHHTTCSEEEEEEHHHHHHHHTTCCTT--SSSCEEEEEECSSCEEEEEEETTE-----EEEEEEESCSHHHHHHHHHH
T ss_pred HHHHHcCCCeEeccCCHHHHHHhcCCCCC--CCceEEEEEeCCCeEEEEEEEcCC-----EEeeCCCCccChhHHHHHHH
Confidence 99999999999999999999999987544 567899999999999999998754 12345678999999999999
Q ss_pred HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHccCCCc------eEEEEe--cccCCceeEEEEeHHHHHHHHHHHHH
Q 005824 244 HFIQEFKRKKKKDISGSPRAVQRLTTACERAKRTLSSTSQ------TTIEID--SLYEGIDFSSVITRARFEELNMDLFR 315 (675)
Q Consensus 244 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~------~~~~i~--~~~~~~~~~~~itr~~~~~~~~~~~~ 315 (675)
++.+++.. .+. ...+|++|+.++.... ..+.++ .+.+|.+..+.|++++|+++++|.++
T Consensus 189 ~l~~~~~~----~~~---------~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~ 255 (344)
T 1jce_A 189 YVRETYRV----AIG---------ERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKGGEVREALRSVVV 255 (344)
T ss_dssp HHHHHHCE----ECC---------HHHHHHHHHHHCBCSCCHHHHHCEEEEEEEETTTTEEEEEEEEHHHHHHHTHHHHH
T ss_pred HHHHHhCc----ccC---------HHHHHHHHHHHhccCccccCCcceEEEeccccCCCCceeEEEeHHHHHHHHHHHHH
Confidence 99877632 111 3679999999986542 244443 34467777889999999999999999
Q ss_pred HHHHHHHHHHHcCCCC--CCCc-cEEEEecCCcChHHHHHHHHHhcCCCcccccCCchhhHHhHHHHHHHHHc
Q 005824 316 KCIKHVDMCLRNGKMD--KSRV-DDVVIVGGSARIPKVQQLLQEFFNGKRLCQNINPDEAVAYGAAVQAAVLS 385 (675)
Q Consensus 316 ~i~~~i~~~l~~~~~~--~~~i-~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~ 385 (675)
++.+.|++.|++++.. .+.+ +.|+|+||+|++|+|+++|++.| +.++....||+++||.||++++..++
T Consensus 256 ~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~-~~~v~~~~~p~~ava~Gaa~~a~~~~ 327 (344)
T 1jce_A 256 AIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKET-GISVIRSEEPLTAVAKGAGMVLDKVN 327 (344)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHH-SSCEEECSSTTTHHHHHHHHGGGCHH
T ss_pred HHHHHHHHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHH-CCCccccCChHHHHHHHHHHHHhChH
Confidence 9999999999987532 1224 68999999999999999999999 67888888999999999999987443
No 11
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.94 E-value=1.3e-27 Score=250.56 Aligned_cols=229 Identities=17% Similarity=0.148 Sum_probs=165.8
Q ss_pred eHHHHHHHHHHHHHHHHHHHhCCCCCcEE--EEeCCCCCHHHHHHHHHHHHHc--------C------CceeEeeChhHH
Q 005824 119 AAEDISSMVLAKMREIAKAYLGSNVKNAV--VTVPAYFTDSQRQATKDAGAMA--------G------LNVLKIISEPTA 182 (675)
Q Consensus 119 ~~~~l~~~~L~~l~~~a~~~~~~~~~~~v--itvP~~~~~~~r~~l~~a~~~A--------g------l~~v~li~Ep~A 182 (675)
..++...+++..|+..++.....+ .++| ++||+++++.||+++++++..+ | +..+.+++||.|
T Consensus 96 ~~~~~~~ll~~~l~~~~~~~~~~~-~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep~A 174 (346)
T 2fsj_A 96 ASKEAFPLIAAALWESGIHNDGSP-VDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQGVG 174 (346)
T ss_dssp TSTTTHHHHHHHHHHHCCCC---C-EEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETTHH
T ss_pred cChhHHHHHHHHHHHhhhccCCCc-eEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccHHH
Confidence 445666677777765542222223 4799 9999999999999999998776 4 466899999999
Q ss_pred HHHHhccccCC-CCCceEEEEEeCCCcEEEEEEEEeCCEEEEEEEcCCCCCcHHHHHHHHHHHHHHHHHhhccCCCCCCH
Q 005824 183 AAIAYGLHRKA-SSEKNVLIFDLGGGTFDVSLLTIGKGIFKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKKKKDISGSP 261 (675)
Q Consensus 183 aa~~~~~~~~~-~~~~~vlvvDiGggT~dvsv~~~~~~~~~~l~~~~~~~~GG~~id~~i~~~l~~~~~~~~~~~~~~~~ 261 (675)
||+++...... ++..+++|||+||||||++++++.++. .+....++..+||++|++.|.+++.+++. ... ..
T Consensus 175 Aa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~-~v~~~s~~~~lGg~~i~~~I~~~i~~~~g----~~~--~i 247 (346)
T 2fsj_A 175 AALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDME-PVVELSFSLQIGVGDAISALSRKIAKETG----FVV--PF 247 (346)
T ss_dssp HHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTE-ECGGGCEEESCCHHHHHHHHHHHHHHHHC----CCC--CH
T ss_pred HHHHhhccccccccCCcEEEEECCCCcEEEEEEEecCCE-EEeecCCCcchhHHHHHHHHHHHHHHHhC----CCc--CC
Confidence 99988322212 234789999999999999999987665 34444566789999999999998877653 200 01
Q ss_pred HHHHHHHHHHHHHHHHccCCCceEEEEecccCCceeEEEEeHHHH-HHHHHHHHHHHHHHHHHHHHcCCCCCCCccEEEE
Q 005824 262 RAVQRLTTACERAKRTLSSTSQTTIEIDSLYEGIDFSSVITRARF-EELNMDLFRKCIKHVDMCLRNGKMDKSRVDDVVI 340 (675)
Q Consensus 262 ~~~~~l~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~~-~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvL 340 (675)
. .+.+| .. ..+.+ .|. .++++++ ++++++++++|.+.+++.|++. .++++.|+|
T Consensus 248 ~-----~~~~e-------~~--~~~~~----~g~----~~~~~~i~~~~i~~~~~~i~~~i~~~l~~~---~~~i~~IvL 302 (346)
T 2fsj_A 248 D-----LAQEA-------LS--HPVMF----RQK----QVGGPEVSGPILEDLANRIIENIRLNLRGE---VDRVTSLIP 302 (346)
T ss_dssp H-----HHHHH-------TT--SCEEE----TTE----EECSHHHHHHHHHHHHHHHHHHHHHHHGGG---GGGEEEEEE
T ss_pred C-----HHHHh-------cC--CeEeE----CCc----cCCHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhcccEEEE
Confidence 1 01122 11 11222 232 2558999 9999999999999999999875 356799999
Q ss_pred ecCCcChHHHHHHHHHhcCCCcc-cccCCchhhHHhHHHHHHH
Q 005824 341 VGGSARIPKVQQLLQEFFNGKRL-CQNINPDEAVAYGAAVQAA 382 (675)
Q Consensus 341 vGG~s~~p~l~~~l~~~~~~~~v-~~~~~p~~ava~Gaa~~a~ 382 (675)
+||+|++ |++.|++.|+...+ ....||++|+|.|+..++.
T Consensus 303 ~GGga~l--l~~~l~~~~~~~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 303 VGGGSNL--IGDRFEEIAPGTLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp ESTTHHH--HGGGGGGGSTTCBCCCCTTTTTTHHHHHHHHHHH
T ss_pred ECCcHHH--HHHHHHHHCcCcEEeccCCCcHHHHHHHHHHHHh
Confidence 9999998 99999999963322 1267999999999998764
No 12
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.94 E-value=2.8e-27 Score=252.62 Aligned_cols=320 Identities=18% Similarity=0.223 Sum_probs=202.3
Q ss_pred cEEEEecccccEEEEEEECCeEEEEecCCCCcccceEEEEeCCceeecHHHHHHhhhCcCchhhcchhhhCCCCCChhhh
Q 005824 8 LGIGIDLGTTYSCVGVWQHNRVEIIANDQGNRTTPSYVAFTKKERFAGNAAKNQLAMNPTNTVFDAKRLIGRRFSDVSVQ 87 (675)
Q Consensus 8 ~viGID~GTt~s~va~~~~g~~~~l~~~~g~~~~PS~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~v~ 87 (675)
.++|||+||++++++..+++.+++. ..|...+|+.. + ......+++.+...+|+++++.-
T Consensus 14 ~~vgiDiGt~~i~~~~~~~~~~~i~--~~g~~~~ps~~-~-----------~~g~i~d~~~~~~~ik~~~~~~~------ 73 (377)
T 2ych_A 14 EALGLEIGASALKLVEVSGNPPALK--ALASRPTPPGL-L-----------MEGMVAEPAALAQEIKELLLEAR------ 73 (377)
T ss_dssp CCEEEEECSSEEEEEEEETTTTEEE--EEEEEECCTTS-E-----------ETTEESCHHHHHHHHHHHHHHHT------
T ss_pred ceEEEEeCCCeEEEEEEeCCceEEE--EEEeEECCCCc-c-----------cCCCcCCHHHHHHHHHHHHHHcC------
Confidence 7899999999999998876664442 22334455532 1 11223456667777788775410
Q ss_pred hhcccCCeEEEeCCCCCceEEEEEcCceeeeeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCC------------
Q 005824 88 EDIKLWPFKVIAGPNDKPMIAVKYKGGEKKYAAEDISSMVLAKMREIAKAYLGSNVKNAVVTVPAYFT------------ 155 (675)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~------------ 155 (675)
...+ .+...-.+......... ...++.+++.. .++..++++++.++.+.++.+|..=.
T Consensus 74 ~~~~----~v~~~i~~~~~~~~~~~--~~~v~~~el~~----~i~~ea~~~~~~~~~~~vid~~~~~~~~~~~~~~~~~v 143 (377)
T 2ych_A 74 TRKR----YVVTALSNLAVILRPIQ--VPKMPLKEMEE----AVRWEAERYIPFPIDEVVLDFAPLTPLSEVQEGEQVQV 143 (377)
T ss_dssp CCCC----EEEEEECGGGCEEEEEE--EECCCHHHHHH----HHHHHHGGGCSSCC-CEEEEEEESSCGGGSCTTSEEEE
T ss_pred CCcc----eEEEEecCCcEEEEEEE--CCCCCHHHHHH----HHHHHHhhcCCCChhHceEEEEEeCCCCCCCCcceeEE
Confidence 0000 01001111111111111 13456666654 34556777888888899998873211
Q ss_pred ------HHHHHHHHHHHHHcCCceeEeeChhHHHHHHhccccCCCCCceEEEEEeCCCcEEEEEEEEeCCEEEEEEEcCC
Q 005824 156 ------DSQRQATKDAGAMAGLNVLKIISEPTAAAIAYGLHRKASSEKNVLIFDLGGGTFDVSLLTIGKGIFKVKATAGD 229 (675)
Q Consensus 156 ------~~~r~~l~~a~~~Agl~~v~li~Ep~Aaa~~~~~~~~~~~~~~vlvvDiGggT~dvsv~~~~~~~~~~l~~~~~ 229 (675)
....+++.++++.||++...++.||.|+|++|.......++..++|+|+||||||+++++.+. +...++
T Consensus 144 ~~va~~~~~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~g~-----~~~~~~ 218 (377)
T 2ych_A 144 MVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDK-----PLAVRV 218 (377)
T ss_dssp EEEEEEHHHHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEETTE-----EEEEEE
T ss_pred EEEEecHHHHHHHHHHHHHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEECCE-----EEEEEe
Confidence 122488999999999999999999999999886543333567899999999999999998433 223456
Q ss_pred CCCcHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHccCCCceEEEEecccCCceeEEEEeHHHHHHH
Q 005824 230 THLGGEDFDNRMVNHFIQEFKRKKKKDISGSPRAVQRLTTACERAKRTLSSTSQTTIEIDSLYEGIDFSSVITRARFEEL 309 (675)
Q Consensus 230 ~~~GG~~id~~i~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~~~~~ 309 (675)
..+||++||+.|.+.+ +.+ ..+||++|+.++.............+-......+++++++++
T Consensus 219 ~~~GG~~i~~~i~~~~--------~~~-----------~~~aE~~K~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~ 279 (377)
T 2ych_A 219 LTLSGKDFTEAIARSF--------NLD-----------LLAAEEVKRTYGMATLPTEDEELLLDFDAERERYSPGRIYDA 279 (377)
T ss_dssp ESCSHHHHHHHHHHHT--------TCC-----------HHHHHHHHHHTC-------------------------CHHHH
T ss_pred eechHHHHHHHHHHHh--------CCC-----------HHHHHHHHhhcccccccccccccccccccccccCCHHHHHHH
Confidence 7899999999998743 111 367899999887543211110000010113457899999999
Q ss_pred HHHHHHHHHHHHHHHHHcC--CCCCCCccEEEEecCCcChHHHHHHHHHhcCCCccccc--------------------C
Q 005824 310 NMDLFRKCIKHVDMCLRNG--KMDKSRVDDVVIVGGSARIPKVQQLLQEFFNGKRLCQN--------------------I 367 (675)
Q Consensus 310 ~~~~~~~i~~~i~~~l~~~--~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~--------------------~ 367 (675)
+++.++++.+.+++.|+.. +.....++.|+|+||+|++|+|++.+++.| +.++... .
T Consensus 280 i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l-~~~v~~~~P~~~v~~~~~~~~~~~l~~~ 358 (377)
T 2ych_A 280 IRPVLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTL-GVNLEPVNPWEAVAVDPKRFESEQLQEI 358 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHH-TSEEEECCGGGGSBCCTTTSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHh-CCCeEecCchhhcccCcccCCHHHHHhh
Confidence 9999999999999999853 444567899999999999999999999999 4544332 2
Q ss_pred CchhhHHhHHHHHHH
Q 005824 368 NPDEAVAYGAAVQAA 382 (675)
Q Consensus 368 ~p~~ava~Gaa~~a~ 382 (675)
+|..++|.|+++++.
T Consensus 359 ~p~~a~a~Glal~~~ 373 (377)
T 2ych_A 359 GPEFAVALGLALRGV 373 (377)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHcCC
Confidence 456778888888763
No 13
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.94 E-value=1e-25 Score=229.29 Aligned_cols=203 Identities=22% Similarity=0.329 Sum_probs=171.6
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHHHHHcCCceeEeeChhHHHHHHhccccCCCCCceEE
Q 005824 121 EDISSMVLAKMREIAKAYLGSNVKNAVVTVPAYFTDSQRQATKDAGAMAGLNVLKIISEPTAAAIAYGLHRKASSEKNVL 200 (675)
Q Consensus 121 ~~l~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~l~~a~~~Agl~~v~li~Ep~Aaa~~~~~~~~~~~~~~vl 200 (675)
.+....+++++++.++...+.....+++++|+.|...+|+.+.++++.+|++...++.||+|++++++.. ..+
T Consensus 70 ~~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~-------~~~ 142 (272)
T 3h1q_A 70 YIGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN-------DGI 142 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCS-------SEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCC-------CEE
Confidence 3556777888888888877777889999999999999999999999999999999999999999988753 259
Q ss_pred EEEeCCCcEEEEEEEEeCCEEEEEEEcCCCCCcHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHccC
Q 005824 201 IFDLGGGTFDVSLLTIGKGIFKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKKKKDISGSPRAVQRLTTACERAKRTLSS 280 (675)
Q Consensus 201 vvDiGggT~dvsv~~~~~~~~~~l~~~~~~~~GG~~id~~i~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~ 280 (675)
|+|+||||||++++..+ .. .......+||.+||+.+.+++.- . .+.++++|+.++
T Consensus 143 viDiGggst~~~~~~~g--~~---~~~~~~~~Gg~~~~~~l~~~l~~----------~---------~~~ae~~k~~~~- 197 (272)
T 3h1q_A 143 VVDIGGGTTGIAVIEKG--KI---TATFDEPTGGTHLSLVLAGSYKI----------P---------FEEAETIKKDFS- 197 (272)
T ss_dssp EEEECSSCEEEEEEETT--EE---EEECCBSCCHHHHHHHHHHHHTC----------C---------HHHHHHHHHSST-
T ss_pred EEEECCCcEEEEEEECC--EE---EEEecCCCcHHHHHHHHHHHhCC----------C---------HHHHHHHHHhcC-
Confidence 99999999999998733 22 24566899999999999988731 1 267888888765
Q ss_pred CCceEEEEecccCCceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccEEEEecCCcChHHHHHHHHHhcCC
Q 005824 281 TSQTTIEIDSLYEGIDFSSVITRARFEELNMDLFRKCIKHVDMCLRNGKMDKSRVDDVVIVGGSARIPKVQQLLQEFFNG 360 (675)
Q Consensus 281 ~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~ 360 (675)
+++++++++++.++++.+.+.+.++..+ +++.|+|+||+|++|++++.|++.| +
T Consensus 198 ---------------------~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~~~~l~~~l~~~l-~ 251 (272)
T 3h1q_A 198 ---------------------RHREIMRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVGGTAYLTGFSEEFSRFL-G 251 (272)
T ss_dssp ---------------------THHHHHHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEESGGGGSTTHHHHHHHHH-S
T ss_pred ---------------------CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCccchhhHHHHHHHHh-C
Confidence 5789999999999999999999998753 4679999999999999999999999 7
Q ss_pred CcccccCCchhhHHhHHHHHH
Q 005824 361 KRLCQNINPDEAVAYGAAVQA 381 (675)
Q Consensus 361 ~~v~~~~~p~~ava~Gaa~~a 381 (675)
.++..+.+|++++|.|||++|
T Consensus 252 ~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 252 KEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp SCCBCCSSGGGHHHHHHHTTC
T ss_pred CCccccCChHHHHHHHHHhcC
Confidence 899889999999999999863
No 14
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.94 E-value=5.2e-27 Score=251.23 Aligned_cols=200 Identities=15% Similarity=0.140 Sum_probs=159.0
Q ss_pred HHHHHHHHHHHHHcCCceeEeeChhHHHHHHhccccCCCCCceEEEEEeCCCcEEEEEEEEeCCEEEEEEEcCCCCCcHH
Q 005824 156 DSQRQATKDAGAMAGLNVLKIISEPTAAAIAYGLHRKASSEKNVLIFDLGGGTFDVSLLTIGKGIFKVKATAGDTHLGGE 235 (675)
Q Consensus 156 ~~~r~~l~~a~~~Agl~~v~li~Ep~Aaa~~~~~~~~~~~~~~vlvvDiGggT~dvsv~~~~~~~~~~l~~~~~~~~GG~ 235 (675)
....+.+.++++.|||+...++.||.|||++++.... ++..++|+|+||||||+++++. +.+ ...+...+||+
T Consensus 167 ~~~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~~--~~~gv~vvDiGggttdisi~~~--g~~---~~~~~i~~GG~ 239 (419)
T 4a2a_A 167 LKVYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTPE--KDRGVVVVNLGYNFTGLIAYKN--GVP---IKISYVPVGMK 239 (419)
T ss_dssp HHHHHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHHH--HHHCEEEEEECSSSEEEEEEET--TEE---EEEEEESCCHH
T ss_pred HHHHHHHHHHHHHcCCcEEEEEEHHHHHHHHhhcccc--ccCCEEEEEECCCcEEEEEEEC--CEE---EEEEecccHHH
Confidence 3457899999999999999999999999998865433 4568999999999999999983 332 23456799999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHccCC-----CceEEEEecccCCceeEEEEeHHHHHHHH
Q 005824 236 DFDNRMVNHFIQEFKRKKKKDISGSPRAVQRLTTACERAKRTLSST-----SQTTIEIDSLYEGIDFSSVITRARFEELN 310 (675)
Q Consensus 236 ~id~~i~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~-----~~~~~~i~~~~~~~~~~~~itr~~~~~~~ 310 (675)
+||+.|.+.+.- ..++||++|..++.. ....+.++...+ .....++++++++++
T Consensus 240 ~it~dIa~~l~~-------------------~~~~AE~iK~~~g~a~~~~~~~~~i~v~~~~~--~~~~~is~~~l~~ii 298 (419)
T 4a2a_A 240 HVIKDVSAVLDT-------------------SFEESERLIITHGNAVYNDLKEEEIQYRGLDG--NTIKTTTAKKLSVII 298 (419)
T ss_dssp HHHHHHHHHHTC-------------------CHHHHHHHHHHHCCSCCTTCCCCEEEEECTTS--CSEEEEEHHHHHHHH
T ss_pred HHHHHHHHHHCC-------------------CHHHHHHHHHHhccCcccCCCCceEEEeecCC--ccceEEcHHHHHHHH
Confidence 999999986621 137899999998642 345677776543 356789999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCC------CCCCccEEEEecCCcChHHHHHHHHHhcCCCccccc-----------------C
Q 005824 311 MDLFRKCIKHVDMCLRNGKM------DKSRVDDVVIVGGSARIPKVQQLLQEFFNGKRLCQN-----------------I 367 (675)
Q Consensus 311 ~~~~~~i~~~i~~~l~~~~~------~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~-----------------~ 367 (675)
+|.++++.+.+++.|+.++. ....++.|+|+||+|++|+|++.+++.| +.++... .
T Consensus 299 ~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~-g~~vri~~~~~~~p~~~~~~~~~~~ 377 (419)
T 4a2a_A 299 HARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVF-KSPVRTGCYANSDRPSIINADEVAN 377 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHH-TSCEEECCGGGSSSCCCBTCHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHH-CCCeEEEecCCCCchhccCcccccC
Confidence 99999999999999999876 3456899999999999999999999999 5655322 3
Q ss_pred CchhhHHhHHHHHHHHH
Q 005824 368 NPDEAVAYGAAVQAAVL 384 (675)
Q Consensus 368 ~p~~ava~Gaa~~a~~l 384 (675)
+|.++++.|+++++...
T Consensus 378 ~P~~~t~~Gl~~~~~~~ 394 (419)
T 4a2a_A 378 DPSFAAAFGNVFAVSEN 394 (419)
T ss_dssp CGGGHHHHHTTCC----
T ss_pred CchHHHHHHHHHHHhhc
Confidence 89999999999998654
No 15
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.93 E-value=2.7e-25 Score=240.29 Aligned_cols=227 Identities=17% Similarity=0.172 Sum_probs=163.2
Q ss_pred CCcEEEEeCCCCCHHHHHHHHHHH-HHcCCceeEeeChhHHHHHH-hccccCCCCCceEEEEEeCCCcEEEEEEEEeCCE
Q 005824 143 VKNAVVTVPAYFTDSQRQATKDAG-AMAGLNVLKIISEPTAAAIA-YGLHRKASSEKNVLIFDLGGGTFDVSLLTIGKGI 220 (675)
Q Consensus 143 ~~~~vitvP~~~~~~~r~~l~~a~-~~Agl~~v~li~Ep~Aaa~~-~~~~~~~~~~~~vlvvDiGggT~dvsv~~~~~~~ 220 (675)
...+++|+|+.++..+|++|.+++ +.+|++.+.+++||.||+++ |........+.+.+|||+|+||||++++. .+.
T Consensus 107 ~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~~~~glVvDiG~gtt~v~~v~--~G~ 184 (418)
T 1k8k_A 107 DHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVA--EGY 184 (418)
T ss_dssp GCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSCCCCEEEEEESSSCEEEEEEE--TTE
T ss_pred CCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCCCCeEEEEEcCCCceEEEEeE--CCE
Confidence 357999999999999999999998 88999999999999999987 32111101122679999999999999986 232
Q ss_pred EEEEEEcCCCCCcHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHccCCC-----------------c
Q 005824 221 FKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKKKKDISGSPRAVQRLTTACERAKRTLSSTS-----------------Q 283 (675)
Q Consensus 221 ~~~l~~~~~~~~GG~~id~~i~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~-----------------~ 283 (675)
. +........+||++||+.|.++|.+++. .+. .. .-...+|++|+.+.... .
T Consensus 185 ~-~~~~~~~~~lGG~~lt~~l~~~l~~~~~-----~~~--~~---~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~ 253 (418)
T 1k8k_A 185 V-IGSCIKHIPIAGRDITYFIQQLLRDREV-----GIP--PE---QSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWI 253 (418)
T ss_dssp E-CGGGCEEESCSHHHHHHHHHHHHHTTCC-----CCC--GG---GHHHHHHHHHHHHCCCCSCHHHHHHHHHHSGGGTC
T ss_pred E-cccceEEEeCcHHHHHHHHHHHHHhcCC-----CCC--CH---HHHHHHHHHHHhhchhcccHHHHHHhhcccccccc
Confidence 1 1222245689999999999999865431 111 00 01245677777764321 1
Q ss_pred eEEEEecccCCceeEEEEeHHHH---HHHHHHHH------HHHHHHHHHHHHcCCC--CCCCccEEEEecCCcChHHHHH
Q 005824 284 TTIEIDSLYEGIDFSSVITRARF---EELNMDLF------RKCIKHVDMCLRNGKM--DKSRVDDVVIVGGSARIPKVQQ 352 (675)
Q Consensus 284 ~~~~i~~~~~~~~~~~~itr~~~---~~~~~~~~------~~i~~~i~~~l~~~~~--~~~~i~~VvLvGG~s~~p~l~~ 352 (675)
..+.++....+....+.+++++| |.+|+|.+ ..|.+.|.+.|..... ....++.|+|+||+|++|++++
T Consensus 254 ~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~pg~~~ 333 (418)
T 1k8k_A 254 KQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGR 333 (418)
T ss_dssp EEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCSTTHHH
T ss_pred eeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceEEeCCccccccHHH
Confidence 35666655555666788999988 55555532 5688889999987653 3445788999999999999999
Q ss_pred HHHHhcCC-----------------------CcccccCCchhhHHhHHHHHHH
Q 005824 353 LLQEFFNG-----------------------KRLCQNINPDEAVAYGAAVQAA 382 (675)
Q Consensus 353 ~l~~~~~~-----------------------~~v~~~~~p~~ava~Gaa~~a~ 382 (675)
+|++.+.. .++..+.+|..++..|++++|.
T Consensus 334 rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilas 386 (418)
T 1k8k_A 334 RLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAS 386 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTT
T ss_pred HHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHc
Confidence 99876521 2344456788999999999885
No 16
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.92 E-value=9.1e-25 Score=232.34 Aligned_cols=297 Identities=15% Similarity=0.171 Sum_probs=194.0
Q ss_pred cEEEEecccccEEEEEEECCeEEEEecCCCCcccceEEEEeC----------CceeecHHHHHHhhhCcCchhhcchhhh
Q 005824 8 LGIGIDLGTTYSCVGVWQHNRVEIIANDQGNRTTPSYVAFTK----------KERFAGNAAKNQLAMNPTNTVFDAKRLI 77 (675)
Q Consensus 8 ~viGID~GTt~s~va~~~~g~~~~l~~~~g~~~~PS~v~~~~----------~~~~~G~~A~~~~~~~~~~~~~~~k~~l 77 (675)
..|+||+||++++++++.++.|..+ +||+++... ...++|++|.... .. ..++
T Consensus 6 ~~ivID~Gs~~~k~G~~~~~~p~~~--------~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~~----~~--~~~~--- 68 (375)
T 2fxu_A 6 TALVCDNGSGLVKAGFAGDDAPRAV--------FPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR----GI--LTLK--- 68 (375)
T ss_dssp CCEEEEECSSEEEEEETTCSSCSEE--------EECCEEEECTTTC-------CCEEHHHHHHHT----TS--EEEE---
T ss_pred ceEEEECCCCeEEEEECCCCCCcee--------eccccccccccccccCCCCCCeEechhHhhcC----cc--ccee---
Confidence 6799999999999999866554322 355555433 3456888877541 00 0011
Q ss_pred CCCCCChhhhhhcccCCeEEEeCCCCCceEEEEEcCceeeeeHHHHHHHHHHHHHHHHHHHhCCC--CCcEEEEeCCCCC
Q 005824 78 GRRFSDVSVQEDIKLWPFKVIAGPNDKPMIAVKYKGGEKKYAAEDISSMVLAKMREIAKAYLGSN--VKNAVVTVPAYFT 155 (675)
Q Consensus 78 g~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~L~~l~~~a~~~~~~~--~~~~vitvP~~~~ 155 (675)
.|+. ...+..-+....+++++.. +.++.. ...+++|+|+.++
T Consensus 69 ---------------~Pi~------------------~G~i~d~d~~e~i~~~~~~---~~L~~~~~~~~vvit~p~~~~ 112 (375)
T 2fxu_A 69 ---------------YPIE------------------HGIITNWDDMEKIWHHTFY---NELRVAPEEHPTLLTEAPLNP 112 (375)
T ss_dssp ---------------CSEE------------------TTEECCHHHHHHHHHHHHH---TTSCCCGGGSCEEEEECTTCC
T ss_pred ---------------cccc------------------CCcccCHHHHHHHHHHHHH---HhcCCCCcCCcEEEEeCCCCc
Confidence 1211 0111222334444444432 223322 2459999999999
Q ss_pred HHHHHHHHHH-HHHcCCceeEeeChhHHHHHHhccccCCCCCceEEEEEeCCCcEEEEEEEEeCCEEEEEEEcCCCCCcH
Q 005824 156 DSQRQATKDA-GAMAGLNVLKIISEPTAAAIAYGLHRKASSEKNVLIFDLGGGTFDVSLLTIGKGIFKVKATAGDTHLGG 234 (675)
Q Consensus 156 ~~~r~~l~~a-~~~Agl~~v~li~Ep~Aaa~~~~~~~~~~~~~~vlvvDiGggT~dvsv~~~~~~~~~~l~~~~~~~~GG 234 (675)
..+|+++.++ .+.+|++.+.+++||.||+++++. .+.+|||+|+||||++.+. ++.. +.......++||
T Consensus 113 ~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~-------~~~lVvDiG~gtt~v~~v~--~G~~-~~~~~~~~~~GG 182 (375)
T 2fxu_A 113 KANREKMTQIMFETFNVPAMYVAIQAVLSLYASGR-------TTGIVLDSGDGVTHNVPIY--EGYA-LPHAIMRLDLAG 182 (375)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTTC-------SSEEEEEECSSCEEEEEEE--TTEE-CGGGCEEESCCH
T ss_pred HHHHHHHHHHHHHhcCcceEEEccchheeeeecCC-------CeEEEEEcCCCceEEeEeE--CCEE-eccceEEeccCH
Confidence 9999988886 578899999999999999999874 3679999999999997765 3321 122233468999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHc----------------cCCCceEEEEecccCCceeE
Q 005824 235 EDFDNRMVNHFIQEFKRKKKKDISGSPRAVQRLTTACERAKRTL----------------SSTSQTTIEIDSLYEGIDFS 298 (675)
Q Consensus 235 ~~id~~i~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~l----------------s~~~~~~~~i~~~~~~~~~~ 298 (675)
++||+.|.++|..+. + .+.. .. -...+|++|+.+ +......+.++ +|. .
T Consensus 183 ~~lt~~l~~~l~~~~---~--~~~~-~~----~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~lp---dg~--~ 247 (375)
T 2fxu_A 183 RDLTDYLMKILTERG---Y--SFVT-TA----EREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELP---DGQ--V 247 (375)
T ss_dssp HHHHHHHHHHHHHHT---C--CCCS-HH----HHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECT---TSC--E
T ss_pred HHHHHHHHHHHHhcC---C--CCCc-HH----HHHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEECC---CCC--E
Confidence 999999999997651 1 1111 00 012344444443 22223334333 333 4
Q ss_pred EEEeHHHH---HHHHHHH-----HHHHHHHHHHHHHcCCCC--CCCccEEEEecCCcChHHHHHHHHHhcC-------CC
Q 005824 299 SVITRARF---EELNMDL-----FRKCIKHVDMCLRNGKMD--KSRVDDVVIVGGSARIPKVQQLLQEFFN-------GK 361 (675)
Q Consensus 299 ~~itr~~~---~~~~~~~-----~~~i~~~i~~~l~~~~~~--~~~i~~VvLvGG~s~~p~l~~~l~~~~~-------~~ 361 (675)
+.|++++| |.+++|. ...|.+.|.+.|.....+ ...++.|+|+||+|++|++.++|++.+. ..
T Consensus 248 i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~p~~~~v 327 (375)
T 2fxu_A 248 ITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKI 327 (375)
T ss_dssp EEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHSCTTCCC
T ss_pred EEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhCCCCeeE
Confidence 67788776 3344553 356888888888876322 2345789999999999999999999873 14
Q ss_pred cccccCCchhhHHhHHHHHHH
Q 005824 362 RLCQNINPDEAVAYGAAVQAA 382 (675)
Q Consensus 362 ~v~~~~~p~~ava~Gaa~~a~ 382 (675)
++..+.+|..++++|+++++.
T Consensus 328 ~v~~~~~p~~~~w~G~si~a~ 348 (375)
T 2fxu_A 328 KIIAPPERKYSVWIGGSILAS 348 (375)
T ss_dssp CEECCTTTTSHHHHHHHHHHH
T ss_pred EEEcCCCCCccEEcchHHhhC
Confidence 566677999999999999996
No 17
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.86 E-value=1.9e-22 Score=209.77 Aligned_cols=227 Identities=17% Similarity=0.201 Sum_probs=146.2
Q ss_pred eeeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCC-CCHH--HH--HHHHHH------------HHHcCCceeEeeCh
Q 005824 117 KYAAEDISSMVLAKMREIAKAYLGSNVKNAVVTVPAY-FTDS--QR--QATKDA------------GAMAGLNVLKIISE 179 (675)
Q Consensus 117 ~~~~~~l~~~~L~~l~~~a~~~~~~~~~~~vitvP~~-~~~~--~r--~~l~~a------------~~~Agl~~v~li~E 179 (675)
.+++..+++.+ ..|+. + ........+++++|.. |... ++ +++.+- .+.+++..+.+++|
T Consensus 73 ~~~~~~l~~i~-~aL~~-~--~~~~~~~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~e 148 (320)
T 2zgy_A 73 QYSDVNVVAVH-HALLT-S--GLPVSEVDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMPE 148 (320)
T ss_dssp GGSHHHHHHHH-HHHHH-H--SCCSCEEEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEES
T ss_pred cchHHHHHHHH-HHHHH-c--CCCCceEEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEecC
Confidence 44566666543 34432 1 1111224699999987 5431 11 222221 12344578999999
Q ss_pred hHHHHHHhccccCCCCCceEEEEEeCCCcEEEEEEEEeCCEEEEEEEcCCCCCcHHHHHHHHHHHHHHHHHhhccCCCCC
Q 005824 180 PTAAAIAYGLHRKASSEKNVLIFDLGGGTFDVSLLTIGKGIFKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKKKKDISG 259 (675)
Q Consensus 180 p~Aaa~~~~~~~~~~~~~~vlvvDiGggT~dvsv~~~~~~~~~~l~~~~~~~~GG~~id~~i~~~l~~~~~~~~~~~~~~ 259 (675)
|.||++++..... ++..++|+|+||||||+++++- +...+....++..+||.+||+.|.+++.++ +.++
T Consensus 149 ~~aa~~~~~~~~~--~~~~~~vvDiGggttd~~v~~~--g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~-----~~~i-- 217 (320)
T 2zgy_A 149 SIPAGYEVLQELD--ELDSLLIIDLGGTTLDISQVMG--KLSGISKIYGDSSLGVSLVTSAVKDALSLA-----RTKG-- 217 (320)
T ss_dssp SHHHHHHHHHHSC--TTCEEEEEEECSSCEEEEEEEG--GGCCEEEEEEECSCCTHHHHHHHHHHTTCC-----SBGG--
T ss_pred cHHHHHhhhcccc--CCCCEEEEEcCCCeEEEEEEeC--CeeEEeeecCCccccHHHHHHHHHHHHHHc-----CCCC--
Confidence 9999998874322 5679999999999999999983 333345456778999999999999988532 1111
Q ss_pred CHHHHHHHHHHHHHH-HHHccCCCceEEEEecccCCceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccEE
Q 005824 260 SPRAVQRLTTACERA-KRTLSSTSQTTIEIDSLYEGIDFSSVITRARFEELNMDLFRKCIKHVDMCLRNGKMDKSRVDDV 338 (675)
Q Consensus 260 ~~~~~~~l~~~~e~~-K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V 338 (675)
+. ..+|++ |..- ... ......+ ..-..+++.+++++.++++.+.+.+.+++. .+++.|
T Consensus 218 ~~-------~~ae~~lk~~~---~~~--~~~~~i~-----~~~~~~~~~~~i~~~~~~~~~~i~~~i~~~----~~~~~v 276 (320)
T 2zgy_A 218 SS-------YLADDIIIHRK---DNN--YLKQRIN-----DENKISIVTEAMNEALRKLEQRVLNTLNEF----SGYTHV 276 (320)
T ss_dssp GH-------HHHHHHHHTTT---CHH--HHHHHSS-----SSCTHHHHHHHHHHHHHHHHHHHHHHHTTC----CCCCEE
T ss_pred CH-------HHHHHHHHHhh---hhh--cccceec-----CchhhHHHHHHHHHHHHHHHHHHHHHHHhh----cCCCeE
Confidence 11 234444 3320 000 0000000 001345666777777777777777777652 467999
Q ss_pred EEecCCcChHHHHHHHHHhcCCC--cccccCCchhhHHhHHHHHH
Q 005824 339 VIVGGSARIPKVQQLLQEFFNGK--RLCQNINPDEAVAYGAAVQA 381 (675)
Q Consensus 339 vLvGG~s~~p~l~~~l~~~~~~~--~v~~~~~p~~ava~Gaa~~a 381 (675)
+|+||+|++ +++.|++.|+.. ++....||++|+|.||++++
T Consensus 277 vl~GGga~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 277 MVIGGGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp EEESTTHHH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred EEECChHHH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 999999987 999999999532 57778899999999999875
No 18
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.82 E-value=2.7e-21 Score=206.59 Aligned_cols=213 Identities=15% Similarity=0.159 Sum_probs=88.4
Q ss_pred cEEEEeCCCCCHHHHHHHHHH-HHHcCCceeEeeChhHHHHHHhccccCCCCCceEEEEEeCCCcEEEEEEEEeCCEEEE
Q 005824 145 NAVVTVPAYFTDSQRQATKDA-GAMAGLNVLKIISEPTAAAIAYGLHRKASSEKNVLIFDLGGGTFDVSLLTIGKGIFKV 223 (675)
Q Consensus 145 ~~vitvP~~~~~~~r~~l~~a-~~~Agl~~v~li~Ep~Aaa~~~~~~~~~~~~~~vlvvDiGggT~dvsv~~~~~~~~~~ 223 (675)
.+++|+|+..+..+|+++.++ .+.+|++.+.++.||.||+++++. .+.+|||+|+|||+++.+.. +.. +
T Consensus 106 ~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~-------~~~lVVDiG~g~T~v~pv~~--G~~-~ 175 (394)
T 1k8k_B 106 KILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGL-------LTGVVVDSGDGVTHICPVYE--GFS-L 175 (394)
T ss_dssp -------------------------------------------------------CCEEEECSSCEEEECEET--TEE-C
T ss_pred cEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCC-------ceEEEEEcCCCceEeeeeEC--CEE-c
Confidence 599999999999999999885 478899999999999999998775 34599999999999987753 222 1
Q ss_pred EEEcCCCCCcHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHccC----------------CCceEEE
Q 005824 224 KATAGDTHLGGEDFDNRMVNHFIQEFKRKKKKDISGSPRAVQRLTTACERAKRTLSS----------------TSQTTIE 287 (675)
Q Consensus 224 l~~~~~~~~GG~~id~~i~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~----------------~~~~~~~ 287 (675)
........+||+++|+.|.++|.++. +......+.. .+|++|+.+.. .....+.
T Consensus 176 ~~~~~~~~~GG~~lt~~l~~~l~~~~---~~~~~~~~~~-------~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~~~~~ 245 (394)
T 1k8k_B 176 PHLTRRLDIAGRDITRYLIKLLLLRG---YAFNHSADFE-------TVRMIKEKLCYVGYNIEQEQKLALETTVLVESYT 245 (394)
T ss_dssp STTCEEESCCHHHHHHHHHHHHHHTT---CCCCTTTTHH-------HHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEE
T ss_pred ccceEEeeccHHHHHHHHHHHHHhcC---CCCCcHHHHH-------HHHHHHHhheeEecCHHHHHHhhccCCcCceEEE
Confidence 11123358999999999999996541 1111112222 34444444321 1112222
Q ss_pred EecccCCceeEEEEeHHHH---HHHHHHH-----HHHHHHHHHHHHHcCCCC--CCCccEEEEecCCcChHHHHHHHHHh
Q 005824 288 IDSLYEGIDFSSVITRARF---EELNMDL-----FRKCIKHVDMCLRNGKMD--KSRVDDVVIVGGSARIPKVQQLLQEF 357 (675)
Q Consensus 288 i~~~~~~~~~~~~itr~~~---~~~~~~~-----~~~i~~~i~~~l~~~~~~--~~~i~~VvLvGG~s~~p~l~~~l~~~ 357 (675)
+ .+|. .+.|+.++| |.+++|. ...|.+.|.+.|.....+ ....+.|+|+||+|++|++.++|++.
T Consensus 246 l---pdg~--~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~~e 320 (394)
T 1k8k_B 246 L---PDGR--IIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERE 320 (394)
T ss_dssp C---TTSC--EEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHHHHH
T ss_pred C---CCCC--EEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHHHHH
Confidence 2 2333 456777766 2333442 245778888888876433 23357899999999999999999987
Q ss_pred cCC------------------CcccccCCchhhHHhHHHHHHH
Q 005824 358 FNG------------------KRLCQNINPDEAVAYGAAVQAA 382 (675)
Q Consensus 358 ~~~------------------~~v~~~~~p~~ava~Gaa~~a~ 382 (675)
+.. .++..+.+|..++..|+++++.
T Consensus 321 l~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilas 363 (394)
T 1k8k_B 321 LKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLAD 363 (394)
T ss_dssp HHHHHHHHTCSSCCCTTCCCCC---------------------
T ss_pred HHHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhC
Confidence 731 2334466788999999999886
No 19
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.76 E-value=6.3e-18 Score=176.95 Aligned_cols=207 Identities=14% Similarity=0.213 Sum_probs=140.2
Q ss_pred CcEEEEeCCCCCHHHH-HHHHHHHHHcCC------------ceeEeeChhHHHHHHhccccCCC----CCceEEEEEeCC
Q 005824 144 KNAVVTVPAYFTDSQR-QATKDAGAMAGL------------NVLKIISEPTAAAIAYGLHRKAS----SEKNVLIFDLGG 206 (675)
Q Consensus 144 ~~~vitvP~~~~~~~r-~~l~~a~~~Agl------------~~v~li~Ep~Aaa~~~~~~~~~~----~~~~vlvvDiGg 206 (675)
..+++++|..+...++ +++++++...+- ..+.+++||.||++++..+.... ....++|||+|+
T Consensus 114 ~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGg 193 (355)
T 3js6_A 114 VVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGS 193 (355)
T ss_dssp EEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECS
T ss_pred EEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCC
Confidence 3789999999887776 589998875542 57899999999999987654211 478899999999
Q ss_pred CcEEEEEEEEeCCEEEEEEEcCCCCCcHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHccCCCceEE
Q 005824 207 GTFDVSLLTIGKGIFKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKKKKDISGSPRAVQRLTTACERAKRTLSSTSQTTI 286 (675)
Q Consensus 207 gT~dvsv~~~~~~~~~~l~~~~~~~~GG~~id~~i~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~~ 286 (675)
||||++++. ++.+ +....++...||..++++|.+++.+++. +..+ +. ...++.+. +
T Consensus 194 gTtd~~v~~--~~~~-~~~~s~s~~~G~~~~~~~i~~~l~~~~~---g~~l--~~-------~~i~~g~~---------~ 249 (355)
T 3js6_A 194 GTTIIDTYQ--NMKR-VEEESFVINKGTIDFYKRIASHVSKKSE---GASI--TP-------RMIEKGLE---------Y 249 (355)
T ss_dssp SCEEEEEEE--TTEE-CGGGCEEESCCHHHHHHHHHHHTC-------------CH-------HHHHSCCC----------
T ss_pred CcEEEEEEc--CCEE-ccccccCcchHHHHHHHHHHHHHHHhcC---CCcC--CH-------HHHhcCCc---------c
Confidence 999999993 3222 0112334689999999999999976542 1111 11 11111111 0
Q ss_pred EEecccCCceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccEEEEecCCcChHH--HHHHHHHhcCCCccc
Q 005824 287 EIDSLYEGIDFSSVITRARFEELNMDLFRKCIKHVDMCLRNGKMDKSRVDDVVIVGGSARIPK--VQQLLQEFFNGKRLC 364 (675)
Q Consensus 287 ~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~--l~~~l~~~~~~~~v~ 364 (675)
.... .+......+ .+.+++++++++++|.+.+++.+.+ .+.++.|+|+||+|.++. |.+.|++.|+..
T Consensus 250 ~~~~--~~~~k~~di-~~~i~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGGa~l~~~~l~~~i~~~~~~~--- 319 (355)
T 3js6_A 250 KQCK--LNQKTVIDF-KDEFYKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGGANIHFDSLSHYYSDVFEKA--- 319 (355)
T ss_dssp --------------C-HHHHHHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTTHHHHHHHHHHHSSSCEECC---
T ss_pred cccc--ccccccccH-HHHHHHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcchhcchhhHHHHHHHHCCCC---
Confidence 0000 000001112 3557778888888888888888764 356789999999999988 888999988532
Q ss_pred ccCCchhhHHhHHHHHHHHHcC
Q 005824 365 QNINPDEAVAYGAAVQAAVLSG 386 (675)
Q Consensus 365 ~~~~p~~ava~Gaa~~a~~l~~ 386 (675)
.||++|+|.|+..++..+.+
T Consensus 320 --~~p~~anA~G~~~~~~~~~~ 339 (355)
T 3js6_A 320 --DDSQFSNVRGYEKLGELLKN 339 (355)
T ss_dssp --SSGGGHHHHHHHHHHHHHHH
T ss_pred --CCcHHHHHHHHHHHHHHHHh
Confidence 79999999999999987653
No 20
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.72 E-value=1.2e-16 Score=162.42 Aligned_cols=182 Identities=20% Similarity=0.164 Sum_probs=120.2
Q ss_pred cCCceeEeeChhHHHHHHhccccCCCCCceEEEEEeCCCcEEEEEEEEeCCEEEEEEEcCCCCCcHHHHHHHHHHHHHHH
Q 005824 169 AGLNVLKIISEPTAAAIAYGLHRKASSEKNVLIFDLGGGTFDVSLLTIGKGIFKVKATAGDTHLGGEDFDNRMVNHFIQE 248 (675)
Q Consensus 169 Agl~~v~li~Ep~Aaa~~~~~~~~~~~~~~vlvvDiGggT~dvsv~~~~~~~~~~l~~~~~~~~GG~~id~~i~~~l~~~ 248 (675)
++......++|++|+++++....+ ....|+|+|||++++.++. .++.++.....++...|+.++++.++++|...
T Consensus 69 a~~~~~~~Vne~~aha~a~~~~~~----~~~~vl~lgG~~~~~~~~~-~~g~~~~~~~~~~~~~g~G~f~d~~a~~l~~~ 143 (276)
T 4ehu_A 69 NYSDADKQISELSCHARGVNFIIP----ETRTIIDIGGQDAKVLKLD-NNGRLLNFLMNDKCAAGTGRFLDVMAKIIEVD 143 (276)
T ss_dssp GCCSCSEECCHHHHHHHHHHHHST----TCCEEEEECSSCEEEEEEC-TTSCEEEEEEECSCSTTSHHHHHHHHHHHTCC
T ss_pred HhhCCCcccchHHHHHHHHHHhCC----CCCeEEEEcCCCceEEEEE-ecCceEEEEeCCCcCcchhhHHHHHHHHhccC
Confidence 556778899999999988766544 2347899999999999885 45677777888888899999999999888433
Q ss_pred HHhhc------cCCCCCCHHHHHHHHHHHHHHHHHccCCCceEEEEecccCCceeEEEEeHHHHHHHHHHHHHHHHHHHH
Q 005824 249 FKRKK------KKDISGSPRAVQRLTTACERAKRTLSSTSQTTIEIDSLYEGIDFSSVITRARFEELNMDLFRKCIKHVD 322 (675)
Q Consensus 249 ~~~~~------~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~i~ 322 (675)
+.... ......+.....-..... +... ..+ ...++++..+.+.+.+.+.
T Consensus 144 ~~~~~~~~~~a~~~~~i~~~~~~f~~s~~---~~~~-------------~~~---------~~~~di~a~~~~~v~~~l~ 198 (276)
T 4ehu_A 144 VSELGSISMNSQNEVSISSTCTVFAESEV---ISHL-------------SEN---------AKIEDIVAGIHTSVAKRVS 198 (276)
T ss_dssp GGGHHHHHTTCSSCCCCCCCSHHHHHHHH---HHHH-------------HTT---------CCHHHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHhcCCCCCCcCCccchhhhhHH---HHhh-------------hcc---------ccHHHHHHHHHHHHHHHHH
Confidence 32110 000000000000000000 0000 000 0123445555555555544
Q ss_pred HHHHcCCCCCCCccEEEEecCCcChHHHHHHHHHhcCCCcccccCCchhhHHhHHHHHHHHHc
Q 005824 323 MCLRNGKMDKSRVDDVVIVGGSARIPKVQQLLQEFFNGKRLCQNINPDEAVAYGAAVQAAVLS 385 (675)
Q Consensus 323 ~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~ 385 (675)
...... ..++.|+|+||.+++|.|++.+++.| +.++..+.+|++++|+|||++|....
T Consensus 199 ~~~~~~----~~~~~vvl~GGva~n~~lr~~l~~~~-g~~~~~p~~p~~~~A~GAAl~A~~~~ 256 (276)
T 4ehu_A 199 SLVKRI----GVQRNVVMVGGVARNSGIVRAMAREI-NTEIIVPDIPQLTGALGAALYAFDEA 256 (276)
T ss_dssp HHHHHH----CCCSSEEEESGGGGCHHHHHHHHHHH-TSCEECCSSGGGHHHHHHHHHHHHHH
T ss_pred HHHHhc----ccCCeEEEecCccchHHHHHHHHHHH-CCCeeeCCCcchHHHHHHHHHHHHHH
Confidence 444332 34678999999999999999999999 89999999999999999999997543
No 21
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.69 E-value=3.4e-18 Score=177.67 Aligned_cols=203 Identities=14% Similarity=0.175 Sum_probs=141.1
Q ss_pred CcEEEEeCCCCCH--HHHHHHHHHHHHc--------C------CceeEeeChhHHHHHHhccccCCCCCceEEEEEeCCC
Q 005824 144 KNAVVTVPAYFTD--SQRQATKDAGAMA--------G------LNVLKIISEPTAAAIAYGLHRKASSEKNVLIFDLGGG 207 (675)
Q Consensus 144 ~~~vitvP~~~~~--~~r~~l~~a~~~A--------g------l~~v~li~Ep~Aaa~~~~~~~~~~~~~~vlvvDiGgg 207 (675)
..+++++|..+.. .+|+.+++.++.- | +..+.+++||.+|.+... ...++..++|+|+|||
T Consensus 106 v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~---~~~~~~~v~vvDiGgg 182 (329)
T 4apw_A 106 VQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQ---ENFKNKNVAVIDFGGL 182 (329)
T ss_dssp EEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSC---CCCTTCEEEEEEECSS
T ss_pred EEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcc---hhhccCCEEEEEeCCC
Confidence 4789999987664 3677787776631 1 245888999999887653 2236789999999999
Q ss_pred cEEEEEEEEeCCEEEEEEEcCCCCCcHHHHHHHHHHHHHH-HHHhhccCCCCCCHHHHHHHHHHHHHHHHHccCCCceEE
Q 005824 208 TFDVSLLTIGKGIFKVKATAGDTHLGGEDFDNRMVNHFIQ-EFKRKKKKDISGSPRAVQRLTTACERAKRTLSSTSQTTI 286 (675)
Q Consensus 208 T~dvsv~~~~~~~~~~l~~~~~~~~GG~~id~~i~~~l~~-~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~~ 286 (675)
|||++++.. +.. +....++..+||.++++.|.+.+.+ ++ +..+.. ..++++|+. .. .
T Consensus 183 Ttd~~v~~~--g~~-~~~~~~~~~~G~~~~~~~i~~~l~~~~~----g~~i~~---------~~~e~i~~~--g~--~-- 240 (329)
T 4apw_A 183 NMGFSLYRN--CVV-NPSERFIEEHGVKDLIIRVGDALTDLNN----GNLITN---------EQAESALNN--GY--M-- 240 (329)
T ss_dssp CEEEEEEET--TEE-CGGGCEEESCCHHHHHHHHHTSSSSCSS----CSCTTS---------BTTTTCSSS--CS--S--
T ss_pred cEEEEEEEC--CEE-eeccccchhhHHHHHHHHHHHHHHhhcc----CCCCCH---------HHHHHHHhc--CC--c--
Confidence 999999983 222 1112345689999999999988854 33 222211 223344332 10 0
Q ss_pred EEecccCCceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccEEEEecCCcChHHHHHHHHHhcCCCccccc
Q 005824 287 EIDSLYEGIDFSSVITRARFEELNMDLFRKCIKHVDMCLRNGKMDKSRVDDVVIVGGSARIPKVQQLLQEFFNGKRLCQN 366 (675)
Q Consensus 287 ~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~ 366 (675)
. .+.+. ..+..+++++++++++++|.+.+++. . ...+.++.|+|+||+|.+ +.+.|++.| +.++...
T Consensus 241 ~-----~g~~~-~~~~~~~i~~~~~e~~~~I~~~i~~~-~---~~~~~~~~IvltGGGA~l--~~~~l~~~~-~~~v~v~ 307 (329)
T 4apw_A 241 K-----KGGEI-DTESSTVIKKVKEKFLKDAIKLIEKR-G---FKLDQLDSLIFIGGTTQK--LKEQISKTY-PNNSIIT 307 (329)
T ss_dssp C-----EECTT-CCSTTHHHHHHHHHHHHHHHHHHHHH-T---CCTTSCSEEEEESTTHHH--HHHHHHHHS-TTCEECC
T ss_pred c-----cCCcc-hhHHHHHHHHHHHHHHHHHHHHHHHc-C---CCHHHccEEEEECChHHH--HHHHHHHHc-CCCCEec
Confidence 0 01111 13456888888888888888888877 3 334457999999999987 679999999 4567788
Q ss_pred CCchhhHHhHHHHHHHHH
Q 005824 367 INPDEAVAYGAAVQAAVL 384 (675)
Q Consensus 367 ~~p~~ava~Gaa~~a~~l 384 (675)
.||..|+|+|+..++...
T Consensus 308 ~~P~~a~a~G~~~~~~~k 325 (329)
T 4apw_A 308 NNSQWTTCEGLYKVAVAK 325 (329)
T ss_dssp SSGGGHHHHHHHHHHHHH
T ss_pred CCChhhHHHHHHHHHhhh
Confidence 899999999999887643
No 22
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.67 E-value=5.1e-17 Score=173.89 Aligned_cols=223 Identities=17% Similarity=0.150 Sum_probs=144.3
Q ss_pred CcEEEEeCCCCCHHHHHHHHHHH-HHcCCceeEeeChhHHHHHHhccccCCC-CCceEEEEEeCCCcEEEEEEEEeCCEE
Q 005824 144 KNAVVTVPAYFTDSQRQATKDAG-AMAGLNVLKIISEPTAAAIAYGLHRKAS-SEKNVLIFDLGGGTFDVSLLTIGKGIF 221 (675)
Q Consensus 144 ~~~vitvP~~~~~~~r~~l~~a~-~~Agl~~v~li~Ep~Aaa~~~~~~~~~~-~~~~vlvvDiGggT~dvsv~~~~~~~~ 221 (675)
..+++|.|...+...|++|.+++ +.+|++.+.++.+|.+|+++.+...... ...+-+|||+|+|+|+++.+..+ ..
T Consensus 124 ~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~~~~~~~tglVVDiG~g~T~v~PV~~G--~~ 201 (427)
T 3dwl_A 124 HYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEG--YV 201 (427)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTTTCSCCCCEEEEEESSSCEEEEEEETT--EE
T ss_pred CcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCcccccCCCceEEEEECCCCceEEEEEECC--EE
Confidence 46999999999999999999977 7899999999999999999877432111 13567999999999999988432 11
Q ss_pred EEEEEcCCCCCcHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHccCCCc-----------eEEEEec
Q 005824 222 KVKATAGDTHLGGEDFDNRMVNHFIQEFKRKKKKDISGSPRAVQRLTTACERAKRTLSSTSQ-----------TTIEIDS 290 (675)
Q Consensus 222 ~~l~~~~~~~~GG~~id~~i~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~-----------~~~~i~~ 290 (675)
+........+||+++|+.|.++|.++... ..+ .+.+|+.|+.+..... ....+..
T Consensus 202 -l~~~~~rl~~gG~~lt~~L~~lL~~~~~~------~~~-------~~~~~~IKe~~cyv~~d~~~e~~~~~~~~~~~~~ 267 (427)
T 3dwl_A 202 -IGSSIKTMPLAGRDVTYFVQSLLRDRNEP------DSS-------LKTAERIKEECCYVCPDIVKEFSRFDREPDRYLK 267 (427)
T ss_dssp -CGGGCEEESCCHHHHHHHHHHTTC---------------------CHHHHHHHHHHCCCCSCHHHHHHHTTC-----CC
T ss_pred -ehhhheeccccHHHHHHHHHHHHHHcCCC------chh-------HHHHHHHHHhcCcccCCHHHHHHHhhcCccccce
Confidence 01111224899999999999988655321 000 1345555655421110 0000111
Q ss_pred --c--cCCceeEEEEeHHHH---HHHHHHH------HHHHHHHHHHHHHcCCCC--CCCccEEEEecCCcChHHHHHHHH
Q 005824 291 --L--YEGIDFSSVITRARF---EELNMDL------FRKCIKHVDMCLRNGKMD--KSRVDDVVIVGGSARIPKVQQLLQ 355 (675)
Q Consensus 291 --~--~~~~~~~~~itr~~~---~~~~~~~------~~~i~~~i~~~l~~~~~~--~~~i~~VvLvGG~s~~p~l~~~l~ 355 (675)
+ .+|....+.|..++| |-+|+|- ...|.+++.+.|.+...+ ..-.++|+|+||+|.+|++.++|+
T Consensus 268 ~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~~dlr~~L~~nIvLtGG~sl~~G~~~RL~ 347 (427)
T 3dwl_A 268 YASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQ 347 (427)
T ss_dssp BCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSCHHHHHHHHHCEEEESGGGCSTTTTHHHH
T ss_pred eEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCCHHHHHHHhCCEEEEccCcCCCChHHHHH
Confidence 1 233333556676665 3344442 245888888888876532 122467999999999999999999
Q ss_pred HhcC---------------------CCcccccCCchhhHHhHHHHHHH
Q 005824 356 EFFN---------------------GKRLCQNINPDEAVAYGAAVQAA 382 (675)
Q Consensus 356 ~~~~---------------------~~~v~~~~~p~~ava~Gaa~~a~ 382 (675)
+.+. ..+|..+.++..++.+|++++|.
T Consensus 348 ~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilas 395 (427)
T 3dwl_A 348 RDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQ 395 (427)
T ss_dssp HHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHH
T ss_pred HHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeecc
Confidence 8651 12445556778999999999985
No 23
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.62 E-value=1.9e-15 Score=163.11 Aligned_cols=178 Identities=14% Similarity=0.115 Sum_probs=118.1
Q ss_pred cEEEEecccccEEEEEEECCeEEEEecCCCCcccceEEEEeCC----ceeecHHHHHHhhhCcCchhhcchhhhCCCCCC
Q 005824 8 LGIGIDLGTTYSCVGVWQHNRVEIIANDQGNRTTPSYVAFTKK----ERFAGNAAKNQLAMNPTNTVFDAKRLIGRRFSD 83 (675)
Q Consensus 8 ~viGID~GTt~s~va~~~~g~~~~l~~~~g~~~~PS~v~~~~~----~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~ 83 (675)
..|+||+||.+++++++.++.|.. .+||+|+.... ..++|+++.... +.. .
T Consensus 24 ~~iVID~GS~~~kaG~ag~~~P~~--------v~PSvVg~~~~~~~~~~~vG~e~~~~~---r~~--l------------ 78 (498)
T 3qb0_A 24 SAVVIDPGSYTTNIGYSGSDFPQS--------ILPSVYGKYTADEGNKKIFSEQSIGIP---RKD--Y------------ 78 (498)
T ss_dssp SCEEEECCSSEEEEEETTCSSCSE--------EEESEEEEESSCSSCCEECCTTGGGSC---CTT--E------------
T ss_pred CeEEEECCCcEEEEEECCCCCeee--------ecCceeEEeccCCCccEEEecHHHhcC---cCc--e------------
Confidence 569999999999999876665433 36999988643 355676422110 000 0
Q ss_pred hhhhhhcccCCeEEEeCCCCCceEEEEEcCceeeeeHHHHHHHHHHHHHHHHHHHhCC--CCC-cEEEEeCCCCCHHHHH
Q 005824 84 VSVQEDIKLWPFKVIAGPNDKPMIAVKYKGGEKKYAAEDISSMVLAKMREIAKAYLGS--NVK-NAVVTVPAYFTDSQRQ 160 (675)
Q Consensus 84 ~~v~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~L~~l~~~a~~~~~~--~~~-~~vitvP~~~~~~~r~ 160 (675)
....|++ ...+..-+.+..+++++.. +.++. ... .+++|.|...+...|+
T Consensus 79 ------~l~~Pi~------------------~GvI~dwd~~E~iw~~~f~---~~L~v~p~~~~pvlltep~~n~~~~Re 131 (498)
T 3qb0_A 79 ------ELKPIIE------------------NGLVIDWDTAQEQWQWALQ---NELYLNSNSGIPALLTEPVWNSTENRK 131 (498)
T ss_dssp ------EEEESEE------------------TTEESCHHHHHHHHHHHHH---HTSCCSCCTTCCEEEEECTTCCHHHHH
T ss_pred ------EEeccCc------------------CCEEccHHHHHHHHHHHHH---hhhCCCcccCCceEEEeCCCCcHHHHH
Confidence 0011211 1222334455555555543 22332 223 5999999999999999
Q ss_pred HHHHHH-HHcCCceeEeeChhHHHHHHhccccCCCCCceEEEEEeCCCcEEEEEEEEeCCEEEEEEEcCCCCCcHHHHHH
Q 005824 161 ATKDAG-AMAGLNVLKIISEPTAAAIAYGLHRKASSEKNVLIFDLGGGTFDVSLLTIGKGIFKVKATAGDTHLGGEDFDN 239 (675)
Q Consensus 161 ~l~~a~-~~Agl~~v~li~Ep~Aaa~~~~~~~~~~~~~~vlvvDiGggT~dvsv~~~~~~~~~~l~~~~~~~~GG~~id~ 239 (675)
+|.+++ +.+|++.+.++.+|.+++++.+.. +-||||+|+|+|+++.+.. +.. +........+||+++|+
T Consensus 132 ~~~eilFE~f~vpav~l~~~~vlalya~G~~-------tglVVDiG~g~T~vvPI~~--G~~-l~~ai~rl~vgG~~lt~ 201 (498)
T 3qb0_A 132 KSLEVLLEGMQFEACYLAPTSTCVSFAAGRP-------NCLVVDIGHDTCSVSPIVD--GMT-LSKSTRRNFIAGKFINH 201 (498)
T ss_dssp HHHHHHHTTSCCSEEEEEEHHHHHHHHHTCS-------SEEEEEECSSCEEEEEEET--TEE-CGGGCEEESCSHHHHHH
T ss_pred HHHHHHHhhcCCCeEeecchHHHHHHHcCCC-------eEEEEEcCCCcEEEEEEeC--CEE-ccccceeccccHHHHHH
Confidence 999964 889999999999999999887652 2399999999999998862 211 01111225799999999
Q ss_pred HHHHHHHH
Q 005824 240 RMVNHFIQ 247 (675)
Q Consensus 240 ~i~~~l~~ 247 (675)
.|.++|.+
T Consensus 202 ~L~~lL~~ 209 (498)
T 3qb0_A 202 LIKKALEP 209 (498)
T ss_dssp HHHHHTTT
T ss_pred HHHHHHHh
Confidence 99999854
No 24
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=99.56 E-value=3.6e-16 Score=127.04 Aligned_cols=67 Identities=16% Similarity=0.223 Sum_probs=60.0
Q ss_pred CCceecccccccCCcCccccCCCCCcceEECCCCCCCCCCccccccccccccccCCCCCceeecCCCCcccccccCCCCc
Q 005824 463 CNFNLHIPCMFIDRKPAAKHEFFGNSTFKSLPKLPGICSTRDCRDCNKHCHACARPADGFVYHCEEKGRNLHPCCFNLPR 542 (675)
Q Consensus 463 C~f~lH~~Ca~~~~~~~~~h~~~~~~~l~~~~~~~~~~~~~~~~~~~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~lp~ 542 (675)
|+..||+.|+.+| +.+.||.||+|+|+|....+ +.|++|++.+.+|+|+|..|+|+||+.||.+|.
T Consensus 15 ~~~~lhe~Ca~lP--~~i~Hp~Hp~H~L~L~~~~~------------~~C~~C~~~~~~~~Y~C~~C~f~lH~~Ca~~p~ 80 (89)
T 1v5n_A 15 IEAKYDEIAKDWP--KKVKHVLHEEHELELTRVQV------------YTCDKCEEEGTIWSYHCDECDFDLHAKCALNED 80 (89)
T ss_dssp HHHHHHHHTSSSC--SEECCSTTTTSCEEEECCSS------------CCCTTTSCCCCSCEEECTTTCCCCCHHHHHCSS
T ss_pred HHHHHhHHHHcCC--ceecCCCCCCCccEEeeCCC------------eEeCCCCCcCCCcEEEcCCCCCeEcHHhcCCCC
Confidence 3568999999998 88999999999999976542 679999999999999999999999999999986
Q ss_pred c
Q 005824 543 K 543 (675)
Q Consensus 543 ~ 543 (675)
.
T Consensus 81 ~ 81 (89)
T 1v5n_A 81 T 81 (89)
T ss_dssp C
T ss_pred c
Confidence 4
No 25
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=99.49 E-value=9.2e-13 Score=148.59 Aligned_cols=118 Identities=16% Similarity=0.207 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHHHHH-HHHhCCCCC-----cEEEEeCCCCCHHHHHHHHH-HHHHcCCceeEeeChhHHHHHHhccccC
Q 005824 120 AEDISSMVLAKMREIA-KAYLGSNVK-----NAVVTVPAYFTDSQRQATKD-AGAMAGLNVLKIISEPTAAAIAYGLHRK 192 (675)
Q Consensus 120 ~~~l~~~~L~~l~~~a-~~~~~~~~~-----~~vitvP~~~~~~~r~~l~~-a~~~Agl~~v~li~Ep~Aaa~~~~~~~~ 192 (675)
..+.+.++ +.|.+++ .+.++.... .+++|.|..++...|+.|.+ +.+..+++.+.+..++.+++++++..
T Consensus 170 ~~~~wdd~-e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~~-- 246 (593)
T 4fo0_A 170 LTAVLADI-EVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGLS-- 246 (593)
T ss_dssp HHHHHHHH-HHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTCS--
T ss_pred hhcCHHHH-HHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCCC--
Confidence 44455544 3344443 345654433 39999999999999999888 56778999999999999999988753
Q ss_pred CCCCceEEEEEeCCCcEEEEEEEEeCCEEEEEEEcCCCCCcHHHHHHHHHHHHHHH
Q 005824 193 ASSEKNVLIFDLGGGTFDVSLLTIGKGIFKVKATAGDTHLGGEDFDNRMVNHFIQE 248 (675)
Q Consensus 193 ~~~~~~vlvvDiGggT~dvsv~~~~~~~~~~l~~~~~~~~GG~~id~~i~~~l~~~ 248 (675)
+-+|||+|++.|.++-+.-+- . +........+||+++++.|.++|..+
T Consensus 247 -----tglVVDiG~~~T~v~PV~dG~--~-l~~~~~rl~~GG~~lt~~L~~lL~~~ 294 (593)
T 4fo0_A 247 -----STCIVDVGDQKTSVCCVEDGV--S-HRNTRLCLAYGGSDVSRCFYWLMQRA 294 (593)
T ss_dssp -----EEEEEEECSSCEEEEEEESSC--B-CGGGCEEESCCHHHHHHHHHHHHHHT
T ss_pred -----ceEEEEeCCCceeeeeeECCE--E-ehhheEEecccHHHHHHHHHHHHHhc
Confidence 459999999999998776332 1 01111224799999999999988654
No 26
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=99.41 E-value=8.9e-13 Score=138.54 Aligned_cols=197 Identities=20% Similarity=0.183 Sum_probs=136.7
Q ss_pred HHHHHHHHHHHHc-CC--ceeEeeChhHHHHHHhccccCCCCCceEEEEEeCCCcEEEEEEEEeCCEEEEEEEcCCCCCc
Q 005824 157 SQRQATKDAGAMA-GL--NVLKIISEPTAAAIAYGLHRKASSEKNVLIFDLGGGTFDVSLLTIGKGIFKVKATAGDTHLG 233 (675)
Q Consensus 157 ~~r~~l~~a~~~A-gl--~~v~li~Ep~Aaa~~~~~~~~~~~~~~vlvvDiGggT~dvsv~~~~~~~~~~l~~~~~~~~G 233 (675)
.+-+++.++++++ |+ +.-. .||.||+++.+...+ ++..++++|+||||||+++|.-+. +........|
T Consensus 368 ~~m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTeDE--~eLGvaiIDmGGGTTd~sVf~~G~-----lv~a~~ip~g 438 (610)
T 2d0o_A 368 LQMAMIAREIEQKLNIDVQIGG--AEAEAAILGALTTPG--TTRPLAILDLGAGSTDASIINPKG-----DIIATHLAGA 438 (610)
T ss_dssp CCHHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTSTT--CCSSEEEEEECSSEEEEEEECTTC-----CEEEEEEECS
T ss_pred HHHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC--CcCCeEEEEeCCCcceEEEEcCCc-----EEEEEEeccc
Confidence 3468899999999 99 5555 999999999887666 788999999999999999998766 3445557899
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHccC----------CCceEEEE--ecccCC---c---
Q 005824 234 GEDFDNRMVNHFIQEFKRKKKKDISGSPRAVQRLTTACERAKRTLSS----------TSQTTIEI--DSLYEG---I--- 295 (675)
Q Consensus 234 G~~id~~i~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~----------~~~~~~~i--~~~~~~---~--- 295 (675)
|++++..|...|.-. . ...||+.|. +.. .++..+.+ +.+... .
T Consensus 439 G~~VT~DIA~~Lgt~----------d--------~~~AErIK~-YG~A~ve~lf~~~dede~Iev~~~~lgp~~~~Rv~~ 499 (610)
T 2d0o_A 439 GDMVTMIIARELGLE----------D--------RYLAEEIKK-YPLAKVESLFHLRHEDGSVQFFSTPLPPAVFARVCV 499 (610)
T ss_dssp HHHHHHHHHHHHTCC----------C--------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTCEEE
T ss_pred hHHHHHHHHHHhCCC----------C--------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeeeeec
Confidence 999999999888222 0 167899998 631 12234444 322110 0
Q ss_pred ---eeEEEEeHHH--HHHHHHHHHHHHHHH--HHHHHHcCC----C-CCCCccEEEEecCCcChHHHHHHHHHhcCCCcc
Q 005824 296 ---DFSSVITRAR--FEELNMDLFRKCIKH--VDMCLRNGK----M-DKSRVDDVVIVGGSARIPKVQQLLQEFFNGKRL 363 (675)
Q Consensus 296 ---~~~~~itr~~--~~~~~~~~~~~i~~~--i~~~l~~~~----~-~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v 363 (675)
..-..| +.+ +|+ ++-+-+++.+. +...|...+ . ...+|..|+|+||+|.++.+.+..++.|...+|
T Consensus 500 ~~~~~L~~I-~pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~~y~V 577 (610)
T 2d0o_A 500 VKADELVPL-PGDLALEK-VRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHYRL 577 (610)
T ss_dssp ECSSCEEEC-CTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTTTSSC
T ss_pred ccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCe
Confidence 111244 455 666 55555554444 122243321 1 245679999999999999999999999953133
Q ss_pred c-------ccCCchhhHHhHHHHHHHH
Q 005824 364 C-------QNINPDEAVAYGAAVQAAV 383 (675)
Q Consensus 364 ~-------~~~~p~~ava~Gaa~~a~~ 383 (675)
+ ....|.+|+|.|++++-+.
T Consensus 578 RiGrP~~~gv~gP~fAtAvGLlly~~~ 604 (610)
T 2d0o_A 578 VAGRGNIRGSEGPRNAVATGLILSWHK 604 (610)
T ss_dssp EEEECCGGGTSTTSCHHHHHHHHHHHH
T ss_pred EEecCCccccCCCcHHHHHHHHHHHhh
Confidence 2 2458999999999998754
No 27
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=99.40 E-value=9.2e-14 Score=146.57 Aligned_cols=194 Identities=20% Similarity=0.158 Sum_probs=135.0
Q ss_pred HHHHHHHHHHc-CC--ceeEeeChhHHHHHHhccccCCCCCceEEEEEeCCCcEEEEEEEEeCCEEEEEEEcCCCCCcHH
Q 005824 159 RQATKDAGAMA-GL--NVLKIISEPTAAAIAYGLHRKASSEKNVLIFDLGGGTFDVSLLTIGKGIFKVKATAGDTHLGGE 235 (675)
Q Consensus 159 r~~l~~a~~~A-gl--~~v~li~Ep~Aaa~~~~~~~~~~~~~~vlvvDiGggT~dvsv~~~~~~~~~~l~~~~~~~~GG~ 235 (675)
-+++.++++++ |+ +.-. .||.||+++.+...+ ++..++++|+||||||+++|.-+. +........||+
T Consensus 372 m~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTedE--~elGvaiIDmGgGTTd~sVf~~g~-----lv~a~~ip~gG~ 442 (607)
T 1nbw_A 372 MQVIARELSARLQTEVVVGG--VEANMAIAGALTTPG--CAAPLAILDLGAGSTDAAIVNAEG-----QITAVHLAGAGN 442 (607)
T ss_dssp SCCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTSTT--CCSSEEEEEECSSEEEEEEECSSS-----CEEEEEEECCHH
T ss_pred HHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC--CcCCeEEEEeCCCcceEEEEcCCc-----EEEEEEeccchH
Confidence 56788999999 99 5544 999999999887666 788999999999999999999776 444555789999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHccC----------CCceEEEE--eccc----CC-----
Q 005824 236 DFDNRMVNHFIQEFKRKKKKDISGSPRAVQRLTTACERAKRTLSS----------TSQTTIEI--DSLY----EG----- 294 (675)
Q Consensus 236 ~id~~i~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~----------~~~~~~~i--~~~~----~~----- 294 (675)
+++..|...|.-. . +..||+.|. +.. .++..+.+ +.+. .-
T Consensus 443 ~VT~DIA~~Lg~~----------d--------~~~AErIK~-YG~A~~e~lf~~~dede~Iev~~~~lgp~~~~R~~~~~ 503 (607)
T 1nbw_A 443 MVSLLIKTELGLE----------D--------LSLAEAIKK-YPLAKVESLFSIRHENGAVEFFREALSPAVFAKVVYIK 503 (607)
T ss_dssp HHHHHHHHHHTCS----------C--------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTCEEEEE
T ss_pred HHHHHHHHHhCCC----------C--------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeeeeeccc
Confidence 9999999888222 0 167899998 631 12224444 3221 11
Q ss_pred ceeEEEEeHHH--HHHHHHHHHHHHHHH--HHHHHHcCCCC-----CCCccEEEEecCCcChHHHHHHHHHhcCCCcc--
Q 005824 295 IDFSSVITRAR--FEELNMDLFRKCIKH--VDMCLRNGKMD-----KSRVDDVVIVGGSARIPKVQQLLQEFFNGKRL-- 363 (675)
Q Consensus 295 ~~~~~~itr~~--~~~~~~~~~~~i~~~--i~~~l~~~~~~-----~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v-- 363 (675)
...-..| +.+ +|+ ++-+-+++.+. +...|...+.. ..+|..|+|+||+|.++.+.+..++.|...+|
T Consensus 504 ~~~L~~I-~~R~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~~VRi 581 (607)
T 1nbw_A 504 EGELVPI-DNASPLEK-IRLVRRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHYGVVA 581 (607)
T ss_dssp TTEEEEE-CCSSCHHH-HHHHHHHHHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTTTCEE
T ss_pred ccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCeEE
Confidence 0111134 455 666 55555554443 23335554332 35679999999999999999999999943133
Q ss_pred -----cccCCchhhHHhHHHHHHH
Q 005824 364 -----CQNINPDEAVAYGAAVQAA 382 (675)
Q Consensus 364 -----~~~~~p~~ava~Gaa~~a~ 382 (675)
+....|.+|+|.|++++-+
T Consensus 582 GrP~~~g~~gP~fAtAvGLlly~~ 605 (607)
T 1nbw_A 582 GQGNIRGTEGPRNAVATGLLLAGQ 605 (607)
T ss_dssp EECCGGGTSCSCCHHHHHHHHHHH
T ss_pred ecCCccccCCchHHHHHHHHHhhh
Confidence 2345899999999998754
No 28
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=99.37 E-value=1.4e-13 Score=111.72 Aligned_cols=59 Identities=29% Similarity=0.704 Sum_probs=53.6
Q ss_pred cccCCCCccccceeecccceecccccCccCCcccCCCCCCcccccCCCceecccccccCC
Q 005824 417 AAQDLPSRAGHKTHRAHDLQLKNHKILSECNGCKRPAFGLMYRCELCNFNLHIPCMFIDR 476 (675)
Q Consensus 417 ~~~~~p~~i~h~~h~~H~l~l~~~~~~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~~~~ 476 (675)
.+..+|.+|.|++||+|+|+|.... ++.|++|.+.+.+.+|+|..|||+||..||..|+
T Consensus 22 ~Ca~lP~~i~Hp~Hp~H~L~L~~~~-~~~C~~C~~~~~~~~Y~C~~C~f~lH~~Ca~~p~ 80 (89)
T 1v5n_A 22 IAKDWPKKVKHVLHEEHELELTRVQ-VYTCDKCEEEGTIWSYHCDECDFDLHAKCALNED 80 (89)
T ss_dssp HTSSSCSEECCSTTTTSCEEEECCS-SCCCTTTSCCCCSCEEECTTTCCCCCHHHHHCSS
T ss_pred HHHcCCceecCCCCCCCccEEeeCC-CeEeCCCCCcCCCcEEEcCCCCCeEcHHhcCCCC
Confidence 4568899999999999999998654 7899999999999999999999999999998874
No 29
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.94 E-value=6.1e-08 Score=97.26 Aligned_cols=73 Identities=25% Similarity=0.187 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCccEEEEecCCcChHHHHHHHHHhcCCCcccccCCchhhHHhHHHHHHHHH
Q 005824 307 EELNMDLFRKCIKHVDMCLRNGKMDKSRVDDVVIVGGSARIPKVQQLLQEFFNGKRLCQNINPDEAVAYGAAVQAAVL 384 (675)
Q Consensus 307 ~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l 384 (675)
+++++.+++.+...+.+.+...+. .+.|+++||.++++.+++.+++.+ +.++..+.+|+.+.|.|||+++...
T Consensus 185 ~di~~av~e~Va~~i~~~~~~~~~----~~~i~~~GG~a~n~~~~~~~~~~l-g~~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 185 IDIIAGIHRSVASRVIGLANRVGI----VKDVVMTGGVAQNYGVRGALEEGL-GVEIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCC----CSSEEEESGGGGCHHHHHHHHHHH-CSCEECCGGGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCC----CCeEEEeCccccCHHHHHHHHHHH-CCCeEeCCCcchHhHHHHHHHHHHh
Confidence 344445555555555555554321 367999999999999999999999 7889888888889999999999753
No 30
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=98.52 E-value=4.6e-06 Score=83.29 Aligned_cols=76 Identities=12% Similarity=0.047 Sum_probs=54.7
Q ss_pred EeHHHHH-HHHHHHHHHHHHHHHHHHHcCCCCCCCccEEEEecC-CcChHHHHHHHHHhc--CCCcccccCCchhhHHhH
Q 005824 301 ITRARFE-ELNMDLFRKCIKHVDMCLRNGKMDKSRVDDVVIVGG-SARIPKVQQLLQEFF--NGKRLCQNINPDEAVAYG 376 (675)
Q Consensus 301 itr~~~~-~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG-~s~~p~l~~~l~~~~--~~~~v~~~~~p~~ava~G 376 (675)
.+++|+. .++..+.++|..+.....+.. .++.|+++|| .+..|.+++.+++.+ .+.++..+.+|+...|.|
T Consensus 207 ~~~eDIaasl~~sV~~~I~~la~~~a~~~-----~i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlG 281 (287)
T 2ews_A 207 FTPSNKLAAVIGVVGEVVTTMAITVAREF-----KTENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIG 281 (287)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHH
Confidence 3566553 344444444444444333443 3457999999 899999999999975 478899999999999999
Q ss_pred HHHHH
Q 005824 377 AAVQA 381 (675)
Q Consensus 377 aa~~a 381 (675)
||+.+
T Consensus 282 AaL~~ 286 (287)
T 2ews_A 282 ALYLE 286 (287)
T ss_dssp HHHTC
T ss_pred HHHhC
Confidence 99863
No 31
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=97.91 E-value=2.8e-05 Score=84.89 Aligned_cols=96 Identities=17% Similarity=0.299 Sum_probs=76.3
Q ss_pred CcEEEEeCCCCCHHHHHHHHHHH-HHcCCceeEeeChhHHHHHHhccccCCCCCceEEEEEeCCCcEEEEEEEEeCCEEE
Q 005824 144 KNAVVTVPAYFTDSQRQATKDAG-AMAGLNVLKIISEPTAAAIAYGLHRKASSEKNVLIFDLGGGTFDVSLLTIGKGIFK 222 (675)
Q Consensus 144 ~~~vitvP~~~~~~~r~~l~~a~-~~Agl~~v~li~Ep~Aaa~~~~~~~~~~~~~~vlvvDiGggT~dvsv~~~~~~~~~ 222 (675)
..+++|.|..++...|+.|.+++ +..|++.+.++.+|.+++++.+. ..+-+|||+|+|+|+++.+.. +..
T Consensus 222 ~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl------~ttGLVVDiG~g~T~VvPV~e--G~v- 292 (655)
T 4am6_A 222 YKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI------STSTCVVNIGAAETRIACVDE--GTV- 292 (655)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC------SSCEEEEEECSSCEEEEEEET--TEE-
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC------CCceEEEcCCCceEEEEEEeC--CEE-
Confidence 46999999999999999999876 56899999999999999988763 245699999999999998852 211
Q ss_pred EEEEcCCCCCcHHHHHHHHHHHHHHH
Q 005824 223 VKATAGDTHLGGEDFDNRMVNHFIQE 248 (675)
Q Consensus 223 ~l~~~~~~~~GG~~id~~i~~~l~~~ 248 (675)
+........+||+++|+.|.++|.++
T Consensus 293 l~~ai~rL~iGG~dLT~yL~kLL~~r 318 (655)
T 4am6_A 293 LEHSAITLDYGGDDITRLFALFLLQS 318 (655)
T ss_dssp CGGGCEEESCCHHHHHHHHHHHHHHT
T ss_pred EhhheeeecchHHHHHHHHHHHHHHc
Confidence 11111225899999999999998654
No 32
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=97.67 E-value=1.5e-05 Score=90.76 Aligned_cols=98 Identities=21% Similarity=0.405 Sum_probs=30.0
Q ss_pred cccceecccccCccCCcccCCCCC---CcccccCCCceecccccccCCc--C------ccccCCCCCcceEECCCCCCCC
Q 005824 432 AHDLQLKNHKILSECNGCKRPAFG---LMYRCELCNFNLHIPCMFIDRK--P------AAKHEFFGNSTFKSLPKLPGIC 500 (675)
Q Consensus 432 ~H~l~l~~~~~~~~C~~C~~~~~g---~~Y~C~~C~f~lH~~Ca~~~~~--~------~~~h~~~~~~~l~~~~~~~~~~ 500 (675)
.|.++......+..|+.|...++| .-|+|..|.|..|+.|...-.. + ....+ ...|.|....-..
T Consensus 37 ~H~f~~~~~~~p~~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~c~~~~~~~~~~~~-~~~h~~~~~~~~~--- 112 (674)
T 3pfq_A 37 NHKFTARFFKQPTFCSHCTDFIWGFGKQGFQCQVCSFVVHKRCHEFVTFSCPGADKGPASDDP-RSKHKFKIHTYSS--- 112 (674)
T ss_dssp ------------------------------------------------------------------CCCCCEECCSS---
T ss_pred CceEEeeeCCCCCccccccccccccCCceeECCCCCCCcChhhcCcCcccCCCcccccccccc-cCCcceeecCCCC---
Confidence 366665555678889999999887 3499999999999999654211 0 00011 1123343322111
Q ss_pred CCccccccccccccccCCCCC---ceeecCCCCcccccccCCCC
Q 005824 501 STRDCRDCNKHCHACARPADG---FVYHCEEKGRNLHPCCFNLP 541 (675)
Q Consensus 501 ~~~~~~~~~~~C~~C~~~~~g---~~Y~C~~C~f~lH~~Ca~lp 541 (675)
.-+|+.|++...| --|+|..|++.+|..|...-
T Consensus 113 --------~~~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~~v 148 (674)
T 3pfq_A 113 --------PTFCDHCGSLLYGLIHQGMKCDTCMMNVHKRCVMNV 148 (674)
T ss_dssp --------CCCCSSSCSCCBBSSSCEECCSSSCCCBCSSTTSSS
T ss_pred --------CCCCCccccccchhhcCccccccCCcchhhhhhhcc
Confidence 1459999987655 47999999999999999653
No 33
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=97.49 E-value=0.0092 Score=60.68 Aligned_cols=78 Identities=17% Similarity=0.249 Sum_probs=50.3
Q ss_pred HHHHHHHHHHcCCceeEeeChhHHHHHHhccccCCC-CCceEEEEEeCCCcEEEEEEEEeCCEEEEEEEcCCCCCcHHHH
Q 005824 159 RQATKDAGAMAGLNVLKIISEPTAAAIAYGLHRKAS-SEKNVLIFDLGGGTFDVSLLTIGKGIFKVKATAGDTHLGGEDF 237 (675)
Q Consensus 159 r~~l~~a~~~Agl~~v~li~Ep~Aaa~~~~~~~~~~-~~~~vlvvDiGggT~dvsv~~~~~~~~~~l~~~~~~~~GG~~i 237 (675)
.+.+.++-+..|++.-.+-.|-||...+.+.....+ .....+|+|+|||+|.+++++-.. +....+.++|.-.+
T Consensus 92 ~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~-----~~~~~Sl~lG~vrl 166 (315)
T 3mdq_A 92 QVLIDRIKKEVNIDVEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGNKNE-----ILWKQSFEIGGQRL 166 (315)
T ss_dssp HHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEECSSC-----EEEEEEESCCHHHH
T ss_pred HHHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEECCe-----EeeeEEEechhhHH
Confidence 344555666679987655566666544444322221 245789999999999999987433 22233468898877
Q ss_pred HHHH
Q 005824 238 DNRM 241 (675)
Q Consensus 238 d~~i 241 (675)
.+.+
T Consensus 167 ~e~f 170 (315)
T 3mdq_A 167 IDRF 170 (315)
T ss_dssp HHHS
T ss_pred HHHh
Confidence 7654
No 34
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=97.44 E-value=0.031 Score=57.17 Aligned_cols=67 Identities=16% Similarity=0.244 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHcCCCCCCCccEEEEecCCcChHHHHHHHHHhcC--CCcccccCC---chhhHHhHHHHHHHHHcC
Q 005824 315 RKCIKHVDMCLRNGKMDKSRVDDVVIVGGSARIPKVQQLLQEFFN--GKRLCQNIN---PDEAVAYGAAVQAAVLSG 386 (675)
Q Consensus 315 ~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~--~~~v~~~~~---p~~ava~Gaa~~a~~l~~ 386 (675)
+.+.+.++++.+.. .++.|+|+||-+....+++.|.+.+. +.++..+.. -|.+++.|++.+.....+
T Consensus 230 ~~l~~~~~~~~~~~-----~~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~~ 301 (330)
T 2ivn_A 230 AALVEVTERAVAHT-----EKDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMYKAG 301 (330)
T ss_dssp HHHHHHHHHHHHHH-----CCSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHh-----CCCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHHHHHHHHHhcC
Confidence 33444444444432 35689999999999999999998773 456666542 246789998877654443
No 35
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=97.41 E-value=0.00077 Score=68.61 Aligned_cols=79 Identities=15% Similarity=0.123 Sum_probs=52.3
Q ss_pred HHHHHHHHHHcCCceeEeeChhHHHHHHhccccCCCCCceEEEEEeCCCcEEEEEEEEeCCEEEEEEEcCCCCCcHHHHH
Q 005824 159 RQATKDAGAMAGLNVLKIISEPTAAAIAYGLHRKASSEKNVLIFDLGGGTFDVSLLTIGKGIFKVKATAGDTHLGGEDFD 238 (675)
Q Consensus 159 r~~l~~a~~~Agl~~v~li~Ep~Aaa~~~~~~~~~~~~~~vlvvDiGggT~dvsv~~~~~~~~~~l~~~~~~~~GG~~id 238 (675)
.+.+..+-+..|++.-.+-.|.||...+.+.....+.....+|+|+|||+|.+++++ ++.+ ....+.++|+..+.
T Consensus 100 ~~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~--~~~~---~~~~Sl~~G~v~l~ 174 (315)
T 1t6c_A 100 EEFLERVKREVGLVVEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGK--GYKV---REVISLPIGIVNLT 174 (315)
T ss_dssp HHHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEEEE--TTEE---EEEEEECCCHHHHH
T ss_pred HHHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEEEe--CCce---eeEEEEeccHHHHH
Confidence 344455555789987666667777655544332222356799999999999999976 3322 22334789999888
Q ss_pred HHHH
Q 005824 239 NRMV 242 (675)
Q Consensus 239 ~~i~ 242 (675)
+.+.
T Consensus 175 e~~~ 178 (315)
T 1t6c_A 175 ETFF 178 (315)
T ss_dssp HHHC
T ss_pred HHhc
Confidence 7753
No 36
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=97.27 E-value=0.024 Score=58.03 Aligned_cols=48 Identities=15% Similarity=0.140 Sum_probs=33.8
Q ss_pred CccEEEEecCCcChHHHHHHHHHhcC--------CCcccccCCchhhHHhHHHHHH
Q 005824 334 RVDDVVIVGGSARIPKVQQLLQEFFN--------GKRLCQNINPDEAVAYGAAVQA 381 (675)
Q Consensus 334 ~i~~VvLvGG~s~~p~l~~~l~~~~~--------~~~v~~~~~p~~ava~Gaa~~a 381 (675)
+++.|+|-||.+..+.+.+.|++.+. ..++....-.+.+.++||+..+
T Consensus 269 ~p~~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~ 324 (327)
T 4db3_A 269 DPHVVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLN 324 (327)
T ss_dssp CCSEEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTT
T ss_pred CCCEEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHH
Confidence 35689999998887777777777662 2234444455788999999754
No 37
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=97.22 E-value=0.01 Score=60.67 Aligned_cols=45 Identities=20% Similarity=0.304 Sum_probs=31.2
Q ss_pred cCCceeEeeChhHHHHHHhccccCCCCCceEEEEEeCCCcEEEEEEE
Q 005824 169 AGLNVLKIISEPTAAAIAYGLHRKASSEKNVLIFDLGGGTFDVSLLT 215 (675)
Q Consensus 169 Agl~~v~li~Ep~Aaa~~~~~~~~~~~~~~vlvvDiGggT~dvsv~~ 215 (675)
.+++ +.+.++..|+|++............++++-+|.| .-.+++.
T Consensus 96 ~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii~ 140 (321)
T 3vgl_A 96 VGLP-VVVENDANAAAWGEYRFGAGQGHDDVICITLGTG-LGGGIII 140 (321)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEE
T ss_pred hCCC-EEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcc-eEEEEEE
Confidence 3664 7899999999988654333334567888899988 4455544
No 38
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=97.20 E-value=0.005 Score=63.08 Aligned_cols=47 Identities=21% Similarity=0.077 Sum_probs=41.4
Q ss_pred ccEEEEecC-CcChHHHHHHHHHhc-----CCCcccccCCchhhHHhHHHHHH
Q 005824 335 VDDVVIVGG-SARIPKVQQLLQEFF-----NGKRLCQNINPDEAVAYGAAVQA 381 (675)
Q Consensus 335 i~~VvLvGG-~s~~p~l~~~l~~~~-----~~~~v~~~~~p~~ava~Gaa~~a 381 (675)
++.|+++|| .+..|.+.+.|++.+ .+.++..+.+|+.+-|+||++.+
T Consensus 306 i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 306 IDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVGALLEL 358 (360)
T ss_dssp CCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHHHHHHH
T ss_pred CCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHHHHHHh
Confidence 446999999 999999999999986 25688888999999999999975
No 39
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=97.16 E-value=0.06 Score=54.33 Aligned_cols=44 Identities=20% Similarity=0.243 Sum_probs=29.5
Q ss_pred cCCceeEeeChhHHHHHHhccccCCCCCceEEEEEeCCCcEEEEEE
Q 005824 169 AGLNVLKIISEPTAAAIAYGLHRKASSEKNVLIFDLGGGTFDVSLL 214 (675)
Q Consensus 169 Agl~~v~li~Ep~Aaa~~~~~~~~~~~~~~vlvvDiGggT~dvsv~ 214 (675)
.++ ++.+.++..|+|++-..........+++++-+|.| .-.+++
T Consensus 98 ~~~-pv~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii 141 (302)
T 3vov_A 98 TGR-PVFLENDANAAALAEHHLGAAQGEESSLYLTVSTG-IGGGVV 141 (302)
T ss_dssp HSS-CEEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred hCC-CEEEEechHHHHHHHHHhCCCCCCCCEEEEEECCc-eeEEEE
Confidence 465 47899999999987654333334567888888877 334444
No 40
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=97.11 E-value=0.09 Score=52.86 Aligned_cols=49 Identities=14% Similarity=0.262 Sum_probs=37.8
Q ss_pred CccEEEEecCCcChHHHHHHHHHhcCCCcccccCCchhhHHhHHHHHHHH
Q 005824 334 RVDDVVIVGGSARIPKVQQLLQEFFNGKRLCQNINPDEAVAYGAAVQAAV 383 (675)
Q Consensus 334 ~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ 383 (675)
+++.|+|.||.+..+.+.+.+++.++..++..+. .+.+.+.||+..+..
T Consensus 239 ~p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~-~~~~~~~GAa~la~~ 287 (299)
T 2e2o_A 239 GTNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDL-GKRSPEIGAVILAYK 287 (299)
T ss_dssp TCSEEEEESGGGGSHHHHHHHHHHHHHTTCEEEC-CSCCHHHHHHHHHHH
T ss_pred CCCEEEEECCccCcHHHHHHHHHHCCCCeEeccC-CCCChHHHHHHHHHH
Confidence 3568999999887788888888887544666555 667899999998854
No 41
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=97.10 E-value=0.014 Score=59.56 Aligned_cols=49 Identities=14% Similarity=0.168 Sum_probs=34.7
Q ss_pred CccEEEEecCCcCh-HHHHHHHHHhc---------CCCcccccCCchhhHHhHHHHHHH
Q 005824 334 RVDDVVIVGGSARI-PKVQQLLQEFF---------NGKRLCQNINPDEAVAYGAAVQAA 382 (675)
Q Consensus 334 ~i~~VvLvGG~s~~-p~l~~~l~~~~---------~~~~v~~~~~p~~ava~Gaa~~a~ 382 (675)
+++.|+|.||.+.. +.+.+.|++.+ ...++....-.+.+.+.||+.++.
T Consensus 260 dP~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~~ 318 (321)
T 3r8e_A 260 DLNNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLIM 318 (321)
T ss_dssp CCCEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHHH
T ss_pred CCCEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHHH
Confidence 35789999998876 66666665544 234566666677899999998763
No 42
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=97.05 E-value=0.016 Score=58.37 Aligned_cols=50 Identities=16% Similarity=0.178 Sum_probs=36.8
Q ss_pred CccEEEEecCCcChHHHHHHHHHhcCC-----CcccccCCchhhHHhHHHHHHHH
Q 005824 334 RVDDVVIVGGSARIPKVQQLLQEFFNG-----KRLCQNINPDEAVAYGAAVQAAV 383 (675)
Q Consensus 334 ~i~~VvLvGG~s~~p~l~~~l~~~~~~-----~~v~~~~~p~~ava~Gaa~~a~~ 383 (675)
+++.|+|.||.+..+.+.+.|++.+.. .++....-.+.|.+.||+.++..
T Consensus 237 ~p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~ 291 (297)
T 4htl_A 237 DPTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQ 291 (297)
T ss_dssp CCSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHH
Confidence 357899999988877777888877632 24444555678999999988754
No 43
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=97.00 E-value=0.34 Score=49.69 Aligned_cols=61 Identities=5% Similarity=-0.002 Sum_probs=42.9
Q ss_pred CCCcEEEEeCCCCCHHHHHHHHHHHHHc-C--CceeEeeChhHHHHHHhccccCCCCCceEEEEEeCCCcE
Q 005824 142 NVKNAVVTVPAYFTDSQRQATKDAGAMA-G--LNVLKIISEPTAAAIAYGLHRKASSEKNVLIFDLGGGTF 209 (675)
Q Consensus 142 ~~~~~vitvP~~~~~~~r~~l~~a~~~A-g--l~~v~li~Ep~Aaa~~~~~~~~~~~~~~vlvvDiGggT~ 209 (675)
++..+.|++|...+......+.+.++.. + ..++.+.++..|+|++. . . ...+++-+|.|.-
T Consensus 70 ~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~-~--~----~~~v~v~~GTGig 133 (347)
T 2ch5_A 70 PLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATA-T--P----DGGVVLISGTGSN 133 (347)
T ss_dssp CBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHH-C--S----SCEEEEEESSSEE
T ss_pred ceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhh-C--C----CCcEEEEEcCCce
Confidence 4678999999998877666676666554 3 24688999999999983 2 1 3455666676643
No 44
>2fc7_A ZZZ3 protein; structure genomics, ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=97.00 E-value=0.00065 Score=53.59 Aligned_cols=52 Identities=15% Similarity=0.415 Sum_probs=37.2
Q ss_pred CccCCcccC-CCCCCcccccCC-C---ceecccccccCCcCccccCCCCCcceEECCCCC
Q 005824 443 LSECNGCKR-PAFGLMYRCELC-N---FNLHIPCMFIDRKPAAKHEFFGNSTFKSLPKLP 497 (675)
Q Consensus 443 ~~~C~~C~~-~~~g~~Y~C~~C-~---f~lH~~Ca~~~~~~~~~h~~~~~~~l~~~~~~~ 497 (675)
.+.||+|.. ++.|.+|+|..| | |+|...|..... ....|. +.|+|..+.++.
T Consensus 21 ~~~Cd~C~~~pI~G~RykC~~C~d~~~yDLC~~C~~~g~-~~~~H~--~~H~~~~i~~~~ 77 (82)
T 2fc7_A 21 GFKCDNCGIEPIQGVRWHCQDCPPEMSLDFCDSCSDCLH-ETDIHK--EDHQLEPIYRSS 77 (82)
T ss_dssp SCCCSSSCCSSEESCEEEESSSCSSSCCEEEGGGTTCCC-CCSSCC--SSSCEEEECSCC
T ss_pred cCCCCCCCCCcceeceEECCcCCCCcceecHHHHHhCcc-ccCCCC--CCCCEEEeeCCC
Confidence 467999985 789999999999 6 999999976531 111232 346777666554
No 45
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=96.97 E-value=0.00067 Score=52.25 Aligned_cols=44 Identities=23% Similarity=0.436 Sum_probs=36.6
Q ss_pred eccccee-cccccCccCCcccCCCCCCcccccCCCceeccccccc
Q 005824 431 RAHDLQL-KNHKILSECNGCKRPAFGLMYRCELCNFNLHIPCMFI 474 (675)
Q Consensus 431 ~~H~l~l-~~~~~~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~~ 474 (675)
..|.+.. .....+..|+-|+..+...-|+|..|+|..|..|...
T Consensus 22 ~~H~F~~~~~~~~pt~C~~C~~~l~~qG~kC~~C~~~cHkkC~~~ 66 (72)
T 2fnf_X 22 EGHRFVELALRGGPGWCDLCGREVLRQALRCANCKFTCHSECRSL 66 (72)
T ss_dssp SSCCCEECCCCSSCCBCTTTSSBCSSCCEECTTSSCEECTGGGGG
T ss_pred CCCccceeecCCCCcchhhhhHHHHhCcCccCCCCCeechhhhcc
Confidence 3477776 6677888999999998556699999999999999764
No 46
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=96.93 E-value=0.00049 Score=52.07 Aligned_cols=46 Identities=26% Similarity=0.521 Sum_probs=38.6
Q ss_pred eeecccceecccccCccCCcccCCCCCC---cccccCCCceeccccccc
Q 005824 429 THRAHDLQLKNHKILSECNGCKRPAFGL---MYRCELCNFNLHIPCMFI 474 (675)
Q Consensus 429 ~h~~H~l~l~~~~~~~~C~~C~~~~~g~---~Y~C~~C~f~lH~~Ca~~ 474 (675)
....|.+.......+..|+.|...++|. -|+|..|+|..|+.|+..
T Consensus 6 ~~~~H~F~~~~~~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~ 54 (65)
T 3uej_A 6 SVGSHRFKVYNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREK 54 (65)
T ss_dssp EEEECCEEEECCSSCCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTT
T ss_pred EeCCceEEeEeCCCCCcccccChhhhccCceeeECCCCCCeEchhHhhh
Confidence 3446888887777899999999998874 399999999999999754
No 47
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=96.93 E-value=0.00076 Score=50.98 Aligned_cols=44 Identities=27% Similarity=0.592 Sum_probs=36.9
Q ss_pred ecccceecccccCccCCcccCCCCCC---cccccCCCceeccccccc
Q 005824 431 RAHDLQLKNHKILSECNGCKRPAFGL---MYRCELCNFNLHIPCMFI 474 (675)
Q Consensus 431 ~~H~l~l~~~~~~~~C~~C~~~~~g~---~Y~C~~C~f~lH~~Ca~~ 474 (675)
..|.+.......+..|+.|...++|. -|+|..|.|..|+.|+..
T Consensus 11 ~~H~F~~~~~~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~ 57 (65)
T 2enz_A 11 MPHRFKVYNYKSPTFCEHCGTLLWGLARQGLKCDACGMNVHHRCQTK 57 (65)
T ss_dssp CCCCEEECCCCSCCBCSSSCCBCCCSSSCSEEESSSCCEECTTTTTT
T ss_pred CCCccEeEcCCCCcCchhcChhheecCCcccccCCCCCccCHhHHhh
Confidence 34777777777889999999999884 399999999999999754
No 48
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=96.92 E-value=0.0028 Score=65.21 Aligned_cols=81 Identities=16% Similarity=0.162 Sum_probs=48.4
Q ss_pred HHHHHHHHHcCCceeEeeChhHHHHHHhccccCCC---CCceEEEEEeCCCcEEEEEEEE--eCCEEEEEEEcCCCCCcH
Q 005824 160 QATKDAGAMAGLNVLKIISEPTAAAIAYGLHRKAS---SEKNVLIFDLGGGTFDVSLLTI--GKGIFKVKATAGDTHLGG 234 (675)
Q Consensus 160 ~~l~~a~~~Agl~~v~li~Ep~Aaa~~~~~~~~~~---~~~~vlvvDiGggT~dvsv~~~--~~~~~~~l~~~~~~~~GG 234 (675)
+.+.++-+..|++.-.+--|-||...+.+...... .....+|+|+|||+|++++++- ....-+ +......++|+
T Consensus 106 ~fl~~v~~~tGi~ieVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~-~~~~~SlplG~ 184 (343)
T 3cer_A 106 EFEDEIERILGVRPEVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQ-VQGAFSMNIGS 184 (343)
T ss_dssp HHHHHHHHHHSSCCEECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTS-CSEEEEESCCH
T ss_pred HHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeecCccCcccc-cceeEEEehhH
Confidence 44555556679876544445555544444322221 2356999999999999999864 220000 01133468999
Q ss_pred HHHHHHH
Q 005824 235 EDFDNRM 241 (675)
Q Consensus 235 ~~id~~i 241 (675)
..+.+.+
T Consensus 185 v~lt~~~ 191 (343)
T 3cer_A 185 VRMTERH 191 (343)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 9888776
No 49
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=96.86 E-value=0.0025 Score=69.43 Aligned_cols=78 Identities=17% Similarity=0.200 Sum_probs=47.3
Q ss_pred HHHHHHHHHcCCceeEeeChhHHHHHHhccccCCCCCceEEEEEeCCCcEEEEEEEEeCCEEEEEEEcCCCCCcHHHHHH
Q 005824 160 QATKDAGAMAGLNVLKIISEPTAAAIAYGLHRKASSEKNVLIFDLGGGTFDVSLLTIGKGIFKVKATAGDTHLGGEDFDN 239 (675)
Q Consensus 160 ~~l~~a~~~Agl~~v~li~Ep~Aaa~~~~~~~~~~~~~~vlvvDiGggT~dvsv~~~~~~~~~~l~~~~~~~~GG~~id~ 239 (675)
+.+.++-+..|++.-.+-.|-||...+.+.....+.....+|+|+|||+|.+++.+ ++.. ....+.++|...+.+
T Consensus 100 ~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~~~~~lviDIGGGStEl~~~~--~~~~---~~~~Sl~lG~vrlte 174 (513)
T 1u6z_A 100 DFLKRAEKVIPYPIEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGE--NFEP---ILVESRRMGCVSFAQ 174 (513)
T ss_dssp HHHHHHTTTCSSCEEECCHHHHHHHHHHHHHHHSCCCSCEEEEEECSSCEEEEEEE--TTEE---EEEEEESCCHHHHHH
T ss_pred HHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHhhccCCCCEEEEEECCCcEEEEEEe--CCee---eEEEEEeccHHHHHH
Confidence 34444445568876544445555444444332222223689999999999999875 3332 223346899998887
Q ss_pred HHH
Q 005824 240 RMV 242 (675)
Q Consensus 240 ~i~ 242 (675)
.+.
T Consensus 175 ~f~ 177 (513)
T 1u6z_A 175 LYF 177 (513)
T ss_dssp HHS
T ss_pred HHc
Confidence 763
No 50
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.84 E-value=0.00035 Score=54.35 Aligned_cols=46 Identities=24% Similarity=0.398 Sum_probs=38.7
Q ss_pred eeecccceecccccCccCCcccCCCCCC---cccccCCCceeccccccc
Q 005824 429 THRAHDLQLKNHKILSECNGCKRPAFGL---MYRCELCNFNLHIPCMFI 474 (675)
Q Consensus 429 ~h~~H~l~l~~~~~~~~C~~C~~~~~g~---~Y~C~~C~f~lH~~Ca~~ 474 (675)
.+..|.++......+..|+.|...++|. -|+|..|+|..|+.|+..
T Consensus 14 ~~~~H~F~~~~f~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~ 62 (74)
T 2db6_A 14 NDKPHKFKDHFFKKPKFCDVCARMIVLNNKFGLRCKNCKTNIHEHCQSY 62 (74)
T ss_dssp CSSBCCEEEEECSSCEECSSSCCEECHHHHEEEEESSSCCEECTTTTGG
T ss_pred cCCCCceEEeeCCCCcCchhcChhhccccCCccccCCCCCccChhHHhh
Confidence 3445888888778889999999999983 499999999999999753
No 51
>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=96.80 E-value=0.00066 Score=53.59 Aligned_cols=49 Identities=18% Similarity=0.478 Sum_probs=40.8
Q ss_pred cccceeecccceecccccCccCCcccCCCCCC-----cccccCCCceecccccc
Q 005824 425 AGHKTHRAHDLQLKNHKILSECNGCKRPAFGL-----MYRCELCNFNLHIPCMF 473 (675)
Q Consensus 425 i~h~~h~~H~l~l~~~~~~~~C~~C~~~~~g~-----~Y~C~~C~f~lH~~Ca~ 473 (675)
.....+..|.+.......+..|+.|...+||. -|.|..|.|..|..|..
T Consensus 17 ~~~~~~~~H~F~~~~~~~PT~Cd~C~~~lWGl~kqp~G~~C~~C~~~~HkrC~~ 70 (84)
T 2row_A 17 SNYICHKGHEFIPTLYHFPTNCEACMKPLWHMFKPPPALECRRCHIKCHKDHMD 70 (84)
T ss_dssp CCCEEETTEEEEEECCSSCEECSSSSSEECCSSSCCCEEEESSSCCEEEHHHHH
T ss_pred cceEEcCCcceEeEcCCCCcchhhcCHhhhccccCCCCCEecCCCCccchhHhC
Confidence 34446667888877788899999999998874 68999999999999975
No 52
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.78 E-value=0.00095 Score=53.19 Aligned_cols=44 Identities=27% Similarity=0.581 Sum_probs=37.4
Q ss_pred ecccceecccccCccCCcccCCCCCC---cccccCCCceeccccccc
Q 005824 431 RAHDLQLKNHKILSECNGCKRPAFGL---MYRCELCNFNLHIPCMFI 474 (675)
Q Consensus 431 ~~H~l~l~~~~~~~~C~~C~~~~~g~---~Y~C~~C~f~lH~~Ca~~ 474 (675)
..|.+.......+..|+.|...++|. -|+|..|.|..|..|...
T Consensus 16 ~~H~F~~~~~~~pt~C~~C~~~lwGl~kqg~~C~~C~~~~Hk~C~~~ 62 (83)
T 2yuu_A 16 KNHEFIATFFGQPTFCSVCKDFVWGLNKQGYKCRQCNAAIHKKCIDK 62 (83)
T ss_dssp GGCCEEEECCSSCCCCSSSCCCCCSSSCCEEEETTTCCEECTTGGGT
T ss_pred CCCceEeEeCCCCcChhhcChhhccccccccccCCcCCeeChhhhhh
Confidence 35777777777889999999999884 399999999999999764
No 53
>2dip_A Zinc finger SWIM domain-containing protein 2; ZZ domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=96.77 E-value=0.00077 Score=55.08 Aligned_cols=46 Identities=33% Similarity=0.594 Sum_probs=36.3
Q ss_pred ccCCcccC-CCCCCcccccCC-CceecccccccCCcCccccCCCCCcceEECCCCC
Q 005824 444 SECNGCKR-PAFGLMYRCELC-NFNLHIPCMFIDRKPAAKHEFFGNSTFKSLPKLP 497 (675)
Q Consensus 444 ~~C~~C~~-~~~g~~Y~C~~C-~f~lH~~Ca~~~~~~~~~h~~~~~~~l~~~~~~~ 497 (675)
..|++|.. ++.|.+|+|..| ||+|...|.... .| +.|+|....++.
T Consensus 32 v~Cd~C~~~pI~G~RykC~~C~d~DLC~~C~~~~-----~H---~~H~f~~i~~~~ 79 (98)
T 2dip_A 32 IPCNNCKQFPIEGKCYKCTECIEYHLCQECFDSY-----CH---LSHTFTFREKRN 79 (98)
T ss_dssp CCCSSSCCSSCCSCEEEESSSSSCEEEHHHHHTT-----SG---GGSCEEECCSSS
T ss_pred CCCcCCCCCCcccCeEECCCCCCccHHHHHHccC-----CC---CCCCeeEecCCC
Confidence 67999996 799999999999 999999997543 24 457777765543
No 54
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=96.77 E-value=0.00083 Score=47.78 Aligned_cols=42 Identities=29% Similarity=0.573 Sum_probs=34.3
Q ss_pred ccceecccccCccCCcccCCCCCC---cccccCCCceeccccccc
Q 005824 433 HDLQLKNHKILSECNGCKRPAFGL---MYRCELCNFNLHIPCMFI 474 (675)
Q Consensus 433 H~l~l~~~~~~~~C~~C~~~~~g~---~Y~C~~C~f~lH~~Ca~~ 474 (675)
|.++..+...+..|+.|...++|. -|+|+.|++..|+.|+..
T Consensus 1 H~F~~~~~~~pt~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~~ 45 (50)
T 1ptq_A 1 HRFKVYNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREK 45 (50)
T ss_dssp CCEEEECCSSCCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTT
T ss_pred CCCEeecCCCCCCcCCCCceeeccCCccCEeCCCCCeECHHHhhh
Confidence 445555666788899999999883 399999999999999754
No 55
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=96.76 E-value=0.0008 Score=51.00 Aligned_cols=44 Identities=20% Similarity=0.523 Sum_probs=36.8
Q ss_pred ecccceecccccCccCCcccCCCCCCc---ccccCCCceeccccccc
Q 005824 431 RAHDLQLKNHKILSECNGCKRPAFGLM---YRCELCNFNLHIPCMFI 474 (675)
Q Consensus 431 ~~H~l~l~~~~~~~~C~~C~~~~~g~~---Y~C~~C~f~lH~~Ca~~ 474 (675)
..|.+.......+..|+.|...++|.. |+|..|.|..|+.|...
T Consensus 12 ~~H~F~~~~~~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~ 58 (66)
T 1y8f_A 12 IQHNFEVWTATTPTYCYECEGLLWGIARQGMRCTECGVKCHEKCQDL 58 (66)
T ss_dssp -CCCEEEEECSSCCCCTTTCCCCCSSCCEEEEETTTCCEECTTHHHH
T ss_pred CCcccEeeeCCCCcChhhcChhhcccCcceeEcCCCCCeeCHHHHhh
Confidence 357777777778899999999999843 99999999999999754
No 56
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=96.74 E-value=0.00062 Score=53.34 Aligned_cols=45 Identities=24% Similarity=0.555 Sum_probs=37.5
Q ss_pred eecccceecccccCccCCcccCCCCCC---cccccCCCceeccccccc
Q 005824 430 HRAHDLQLKNHKILSECNGCKRPAFGL---MYRCELCNFNLHIPCMFI 474 (675)
Q Consensus 430 h~~H~l~l~~~~~~~~C~~C~~~~~g~---~Y~C~~C~f~lH~~Ca~~ 474 (675)
+..|.+.......+..|+.|...++|. -|+|..|.|..|+.|...
T Consensus 21 ~~~H~F~~~~f~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~ 68 (77)
T 2enn_A 21 VKCHEFTATFFPQPTFCSVCHEFVWGLNKQGYQCRQCNAAIHKKCIDK 68 (77)
T ss_dssp SSSCEEEEECCSSCEECSSSCCEECCTTCCEEECSSSCCEEESGGGSS
T ss_pred CCCCccEEEcCCCCcCccccChhhccccccccCcCCCCCcCCHhHHhh
Confidence 345777777777889999999999874 399999999999999754
No 57
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=96.72 E-value=0.036 Score=55.60 Aligned_cols=49 Identities=16% Similarity=0.123 Sum_probs=33.2
Q ss_pred ccEEEEecCCcChHHHHHHHHHhcC-----------CCcccccCCchhhHHhHHHHHHHH
Q 005824 335 VDDVVIVGGSARIPKVQQLLQEFFN-----------GKRLCQNINPDEAVAYGAAVQAAV 383 (675)
Q Consensus 335 i~~VvLvGG~s~~p~l~~~l~~~~~-----------~~~v~~~~~p~~ava~Gaa~~a~~ 383 (675)
++.|+|.||.+..+.+.+.+++.+. ..++....-...+.+.||+..+..
T Consensus 228 p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~~ 287 (292)
T 2gup_A 228 PGVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWLQ 287 (292)
T ss_dssp CSEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHHH
T ss_pred CCEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHHHH
Confidence 4689999998766766666665541 134444444567899999988754
No 58
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.63 E-value=0.0012 Score=52.79 Aligned_cols=43 Identities=23% Similarity=0.668 Sum_probs=36.7
Q ss_pred cccceecccccCccCCcccCCCCCC---cccccCCCceeccccccc
Q 005824 432 AHDLQLKNHKILSECNGCKRPAFGL---MYRCELCNFNLHIPCMFI 474 (675)
Q Consensus 432 ~H~l~l~~~~~~~~C~~C~~~~~g~---~Y~C~~C~f~lH~~Ca~~ 474 (675)
.|.+.......+..|+.|...++|. -|+|..|.|..|..|+..
T Consensus 17 ~H~F~~~~~~~pt~C~~C~~~l~Gl~kqG~~C~~C~~~~Hk~C~~~ 62 (85)
T 2eli_A 17 KHKFKIHTYGSPTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVIN 62 (85)
T ss_dssp SCCCEEECCSSCCBCSSSCCBCCCSSSCEEECSSSCCEEETTTTTT
T ss_pred CcccEeeeCCCCcCCcccCccccccccCCCcCCCcCCccCHhHHhh
Confidence 4777777777889999999999884 399999999999999764
No 59
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=96.62 E-value=0.00056 Score=77.69 Aligned_cols=86 Identities=15% Similarity=0.220 Sum_probs=32.0
Q ss_pred cccccccCCCCCc---eeecCCCCcccccccCCCCccee------------eCCeeeEecCCCCcccccccccccccCCC
Q 005824 510 KHCHACARPADGF---VYHCEEKGRNLHPCCFNLPRKLA------------IGSVEFVLSDKELSQECIWCESKRLQGSA 574 (675)
Q Consensus 510 ~~C~~C~~~~~g~---~Y~C~~C~f~lH~~Ca~lp~~i~------------~~~h~~~l~~~~~~~~C~~C~~~~~~~~~ 574 (675)
.+|+.|+.-+-|+ .|+|..|++.+|..|..+-...- ...|.+....-.....|+.|++...+
T Consensus 49 ~~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~c~~~~~~~~~~~~~~~h~~~~~~~~~~~~C~~C~~~l~g--- 125 (674)
T 3pfq_A 49 TFCSHCTDFIWGFGKQGFQCQVCSFVVHKRCHEFVTFSCPGADKGPASDDPRSKHKFKIHTYSSPTFCDHCGSLLYG--- 125 (674)
T ss_dssp -----------------------------------------------------CCCCCEECCSSCCCCSSSCSCCBB---
T ss_pred CccccccccccccCCceeECCCCCCCcChhhcCcCcccCCCcccccccccccCCcceeecCCCCCCCCCccccccch---
Confidence 4599999976553 69999999999999987532111 01244443322344589999886421
Q ss_pred CCCCCeEEeecCCCeeEeccchHHHH
Q 005824 575 SDNWGWSYVSKCNNYHCHAFCSTEML 600 (675)
Q Consensus 575 ~~~~~w~Y~c~~c~~~lH~~C~~~~~ 600 (675)
...--|+|.+|++.+|.+|...+.
T Consensus 126 --~~~qg~~C~~C~~~~H~~C~~~v~ 149 (674)
T 3pfq_A 126 --LIHQGMKCDTCMMNVHKRCVMNVP 149 (674)
T ss_dssp --SSSCEECCSSSCCCBCSSTTSSSC
T ss_pred --hhcCccccccCCcchhhhhhhccC
Confidence 112479999999999999987654
No 60
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=96.53 E-value=0.03 Score=57.18 Aligned_cols=48 Identities=27% Similarity=0.296 Sum_probs=33.3
Q ss_pred ccEEEEecCCcC-hHHHHHHHHHhcC---------CCcccccCCchhhHHhHHHHHHH
Q 005824 335 VDDVVIVGGSAR-IPKVQQLLQEFFN---------GKRLCQNINPDEAVAYGAAVQAA 382 (675)
Q Consensus 335 i~~VvLvGG~s~-~p~l~~~l~~~~~---------~~~v~~~~~p~~ava~Gaa~~a~ 382 (675)
++.|+|.||.+. .+.+.+.+++.+. ..++......+.+.+.||+.++.
T Consensus 263 p~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~ 320 (326)
T 2qm1_A 263 PDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLAL 320 (326)
T ss_dssp CSEEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHGG
T ss_pred CCEEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHHHH
Confidence 468999999875 5777777766552 23444444567789999998764
No 61
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=96.43 E-value=0.036 Score=56.69 Aligned_cols=44 Identities=14% Similarity=0.168 Sum_probs=29.3
Q ss_pred cCCceeEeeChhHHHHHHhccccCCCCCceEEEEEeCCCcEEEEEE
Q 005824 169 AGLNVLKIISEPTAAAIAYGLHRKASSEKNVLIFDLGGGTFDVSLL 214 (675)
Q Consensus 169 Agl~~v~li~Ep~Aaa~~~~~~~~~~~~~~vlvvDiGggT~dvsv~ 214 (675)
.+++ +.+.++..|+|++............++++-+|.| .-.+++
T Consensus 120 ~~~p-v~v~NDa~aaalgE~~~g~~~~~~~~v~l~~GtG-iG~giv 163 (327)
T 2ap1_A 120 LDRD-VRLDNDANCFALSEAWDDEFTQYPLVMGLILGTG-VGGGLV 163 (327)
T ss_dssp HTSC-EEEEEHHHHHHHHHHTSTTGGGCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEecHHHHHHHHHHHhCcCCCCCcEEEEEECCc-EEEEEE
Confidence 3654 7899999999987543322223467888888887 334444
No 62
>2e5r_A Dystrobrevin alpha; ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.41 E-value=0.0014 Score=48.81 Aligned_cols=32 Identities=34% Similarity=0.945 Sum_probs=28.1
Q ss_pred ccCCcccC-CCCCCcccccCC-CceecccccccC
Q 005824 444 SECNGCKR-PAFGLMYRCELC-NFNLHIPCMFID 475 (675)
Q Consensus 444 ~~C~~C~~-~~~g~~Y~C~~C-~f~lH~~Ca~~~ 475 (675)
..|++|.. ++.|.+|+|..| ||+|...|....
T Consensus 12 ~~Cd~C~~~pi~G~RykC~~C~d~DLC~~C~~~g 45 (63)
T 2e5r_A 12 VECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRG 45 (63)
T ss_dssp SCCSSSCCCSSCSCEEEESSCSSCEECHHHHHHC
T ss_pred CCCcCCCCcceecceEEecCCCCchhHHHHHhCC
Confidence 56999996 499999999999 999999997654
No 63
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=96.33 E-value=0.0029 Score=44.35 Aligned_cols=41 Identities=22% Similarity=0.452 Sum_probs=32.0
Q ss_pred ccceecccccCccCCcccCCCCCCcccccCCCceecccccccC
Q 005824 433 HDLQLKNHKILSECNGCKRPAFGLMYRCELCNFNLHIPCMFID 475 (675)
Q Consensus 433 H~l~l~~~~~~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~~~ 475 (675)
|.+...+.. +..|+.|+..++.. |+|.+|+|..|..|+...
T Consensus 5 HrF~~~t~~-~t~C~~C~k~i~~G-~kC~~Ck~~cH~kC~~~v 45 (49)
T 1kbe_A 5 HRFSTKSWL-SQVCNVCQKSMIFG-VKCKHCRLKCHNKCTKEA 45 (49)
T ss_dssp CCEEEECCS-SCCCSSSCCSSCCE-EEETTTTEEESSSCTTTS
T ss_pred cccCccCCC-CcCccccCceeECc-CCCCCCCCccchhhcCcC
Confidence 555555443 47799999999843 999999999999998643
No 64
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=96.19 E-value=0.0082 Score=66.33 Aligned_cols=84 Identities=15% Similarity=0.172 Sum_probs=60.7
Q ss_pred EeHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccEEEEecCCcChHHHHHHHHHhcCCCcccccCCchhhHHhHHHHH
Q 005824 301 ITRARFEELNMDLFRKCIKHVDMCLRNGKMDKSRVDDVVIVGGSARIPKVQQLLQEFFNGKRLCQNINPDEAVAYGAAVQ 380 (675)
Q Consensus 301 itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~ 380 (675)
-++.++..+++-+++.+.-.++..++........++.|.++||+++++.+.+.+.+.+ +.+|..+ +..++.|.|||+.
T Consensus 409 ~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~~~~~i~~~GG~aks~~~~Qi~ADv~-g~pV~~~-~~~e~~alGAA~l 486 (554)
T 3l0q_A 409 TTPEDMALRYLATIQALALGTRHIIETMNQNGYNIDTMMASGGGTKNPIFVQEHANAT-GCAMLLP-EESEAMLLGSAMM 486 (554)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEESGGGGCHHHHHHHHHHH-CCEEEEE-SCSCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccCHHHHHHHHHhh-CCeEEec-CCCcchHHHHHHH
Confidence 4688875444555555554444433322111245789999999999999999999999 8888776 4567999999999
Q ss_pred HHHHcC
Q 005824 381 AAVLSG 386 (675)
Q Consensus 381 a~~l~~ 386 (675)
|+.-.|
T Consensus 487 A~~a~G 492 (554)
T 3l0q_A 487 GTVAAG 492 (554)
T ss_dssp HHHHTT
T ss_pred HHHHcC
Confidence 987666
No 65
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=96.12 E-value=0.0026 Score=45.57 Aligned_cols=42 Identities=24% Similarity=0.587 Sum_probs=35.8
Q ss_pred cccceecccccCccCCcccCCCCCCcccccCCCceeccccccc
Q 005824 432 AHDLQLKNHKILSECNGCKRPAFGLMYRCELCNFNLHIPCMFI 474 (675)
Q Consensus 432 ~H~l~l~~~~~~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~~ 474 (675)
.|.++..+...+..|+.|...++ .-|+|+.|++..|+.|...
T Consensus 3 ~H~F~~~~~~~pt~C~~C~~~l~-qG~~C~~C~~~~H~~C~~~ 44 (52)
T 1faq_A 3 THNFARKTFLKLAFCDICQKFLL-NGFRCQTCGYKFHEHCSTK 44 (52)
T ss_dssp CCCCEEECCSSCEECTTSSSEEC-SEEECTTTTCCBCSTTSSS
T ss_pred CceeEeEeCCCCcCCCCcccccc-cCCEeCCCCCeEChhHHhh
Confidence 47777777777889999999888 6799999999999999754
No 66
>1tot_A CREB-binding protein; zinc binding, CBP, TAZ2, transferase; NMR {Mus musculus} SCOP: g.44.1.6
Probab=96.11 E-value=0.00057 Score=48.74 Aligned_cols=32 Identities=28% Similarity=0.808 Sum_probs=27.4
Q ss_pred CccCCcccCCCCCCcccccCC-CceecccccccC
Q 005824 443 LSECNGCKRPAFGLMYRCELC-NFNLHIPCMFID 475 (675)
Q Consensus 443 ~~~C~~C~~~~~g~~Y~C~~C-~f~lH~~Ca~~~ 475 (675)
.+.|++|...+ |.+|+|..| ||+|...|....
T Consensus 6 ~~~Cd~C~~~i-g~R~~C~~C~dyDLC~~C~~~~ 38 (52)
T 1tot_A 6 VYTCNECKHHV-ETRWHCTVCEDYDLCINCYNTK 38 (52)
T ss_dssp CEEETTTTEEE-SSEEEESSSSSCEECHHHHHHH
T ss_pred EEECCCCCCCC-cceEEcCCCCCchhHHHHHhCC
Confidence 35699999884 889999999 999999997543
No 67
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=96.05 E-value=0.071 Score=53.32 Aligned_cols=47 Identities=21% Similarity=0.193 Sum_probs=32.9
Q ss_pred ccEEEEecCCcChHHHHHHHHHhcCC------CcccccCCchhhHHhHHHHHH
Q 005824 335 VDDVVIVGGSARIPKVQQLLQEFFNG------KRLCQNINPDEAVAYGAAVQA 381 (675)
Q Consensus 335 i~~VvLvGG~s~~p~l~~~l~~~~~~------~~v~~~~~p~~ava~Gaa~~a 381 (675)
++.|+|.||.+..+.+.+.+++.+.. .++......+.+.+.||+.++
T Consensus 234 p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 234 CQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp CSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHH
Confidence 46799999887667777888777632 233334445678999999876
No 68
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=96.04 E-value=0.013 Score=64.58 Aligned_cols=78 Identities=12% Similarity=0.096 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCccEEEEecCCcChHHHHHHHHHhcCCCcccccCCchhhHHhHHHHHHHHHcC
Q 005824 307 EELNMDLFRKCIKHVDMCLRNGKMDKSRVDDVVIVGGSARIPKVQQLLQEFFNGKRLCQNINPDEAVAYGAAVQAAVLSG 386 (675)
Q Consensus 307 ~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 386 (675)
..+++-+++.+.-.++..++..+.....++.|.++||+++++.+.+.+.+.+ +.+|..+ .+.++.|.|||+.|+.-.|
T Consensus 407 ~~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G 484 (538)
T 4bc3_A 407 DVEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVF-DAPVYVI-DTANSACVGSAYRAFHGLA 484 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHH-TSCEEEC-CCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHh-CCceEec-CCCCchHHHHHHHHHHHhC
Confidence 3444555555555555566554444456789999999999999999999999 7888775 5678999999999986554
No 69
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=96.00 E-value=0.009 Score=64.86 Aligned_cols=53 Identities=28% Similarity=0.377 Sum_probs=45.8
Q ss_pred CCccEEEEecCCcChHHHHHHHHHhcCCCcccccCCchhhHHhHHHHHHHHHcC
Q 005824 333 SRVDDVVIVGGSARIPKVQQLLQEFFNGKRLCQNINPDEAVAYGAAVQAAVLSG 386 (675)
Q Consensus 333 ~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 386 (675)
..++.|.++||+++++.+.+.+.+.+ +.+|..+..++.+.|.|||+.|+.-.+
T Consensus 385 ~~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~~~~e~~~alGAA~lA~~~~g 437 (484)
T 2itm_A 385 IKPQSVTLIGGGARSEYWRQMLADIS-GQQLDYRTGGDVGPALGAARLAQIAAN 437 (484)
T ss_dssp CCCSCEEEESGGGCCHHHHHHHHHHH-CCCEEEESCTTSCHHHHHHHHHHHHHC
T ss_pred CCcceEEEEeccccCHHHHHHHHHHh-CCeEEeCCCCCcccHHHHHHHHHHHcC
Confidence 35678999999999999999999999 899988766665699999999987655
No 70
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=95.98 E-value=0.16 Score=53.50 Aligned_cols=44 Identities=14% Similarity=0.235 Sum_probs=29.6
Q ss_pred cCCceeEeeChhHHHHHHhccccCCCCCceEEEEEeCCCcEEEEEE
Q 005824 169 AGLNVLKIISEPTAAAIAYGLHRKASSEKNVLIFDLGGGTFDVSLL 214 (675)
Q Consensus 169 Agl~~v~li~Ep~Aaa~~~~~~~~~~~~~~vlvvDiGggT~dvsv~ 214 (675)
.+++ +.+.++..|+|++............++++-+|.| .-.+++
T Consensus 186 ~~~p-v~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~giv 229 (406)
T 1z6r_A 186 TGVP-VYIQHDISAWTMAEALFGASRGARDVIQVVIDHN-VGAGVI 229 (406)
T ss_dssp HSSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhcCCCCCCcEEEEEECCc-EEEEEE
Confidence 3664 7899999999987543322224467888888887 445554
No 71
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=95.91 E-value=0.012 Score=64.03 Aligned_cols=51 Identities=18% Similarity=0.176 Sum_probs=45.2
Q ss_pred CccEEEEecCCcChHHHHHHHHHhcCCCcccccCCchhhHHhHHHHHHHHHcC
Q 005824 334 RVDDVVIVGGSARIPKVQQLLQEFFNGKRLCQNINPDEAVAYGAAVQAAVLSG 386 (675)
Q Consensus 334 ~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 386 (675)
.++.|.++||+++++.+.+.+.+.+ +.+|..+ ++.++.|.|||+.|+.-.|
T Consensus 393 ~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G 443 (504)
T 3ll3_A 393 KPVAINATGGFLKSDFVRQLCANIF-NVPIVTM-KEQQSGTLAAMFLARQALG 443 (504)
T ss_dssp CCSEEEEESGGGCSHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCchhcCHHHHHHHHHhh-CCeEEec-CCCCchhHHHHHHHHHHcC
Confidence 5789999999999999999999999 7888775 4667999999999987665
No 72
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=95.86 E-value=0.015 Score=63.35 Aligned_cols=79 Identities=13% Similarity=0.148 Sum_probs=56.9
Q ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccEEEEecCCcChHHHHHHHHHhcCCCcccccCCchhhHHhHHHHHH
Q 005824 302 TRARFEELNMDLFRKCIKHVDMCLRNGKMDKSRVDDVVIVGGSARIPKVQQLLQEFFNGKRLCQNINPDEAVAYGAAVQA 381 (675)
Q Consensus 302 tr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a 381 (675)
++.++ ++-+++.+.-.++..++...... .++.|.++||+++++.+.+.+.+.+ +.+|..+ .+.++.|.|||+.|
T Consensus 365 ~~~~l---~rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~lA 438 (497)
T 2zf5_O 365 GREHL---ARATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGATANDFLMQFQADIL-NRKVIRP-VVKETTALGAAYLA 438 (497)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCccccCHHHHHHHHhhc-CCeEEEc-CCCcchHHHHHHHH
Confidence 45444 34444455544555444432222 5788999999999999999999999 7888766 45569999999999
Q ss_pred HHHcC
Q 005824 382 AVLSG 386 (675)
Q Consensus 382 ~~l~~ 386 (675)
+.-.|
T Consensus 439 ~~~~g 443 (497)
T 2zf5_O 439 GLAVD 443 (497)
T ss_dssp HHHTT
T ss_pred HHHhC
Confidence 87665
No 73
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=95.84 E-value=0.0099 Score=64.95 Aligned_cols=79 Identities=24% Similarity=0.359 Sum_probs=55.3
Q ss_pred eHHHHH-HHHHHHHHHHHHHHHHHHHcCCCCCCCccEEEEecCCcChHHHHHHHHHhcCCCcccccCCchhhHHhHHHHH
Q 005824 302 TRARFE-ELNMDLFRKCIKHVDMCLRNGKMDKSRVDDVVIVGGSARIPKVQQLLQEFFNGKRLCQNINPDEAVAYGAAVQ 380 (675)
Q Consensus 302 tr~~~~-~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~ 380 (675)
++.++. .+++.+.-.+...++ .|++.+ ..++.|+++||+++++.+.+.+.+.+ +.+|..+ .+.++.|.|||+.
T Consensus 395 ~~~~l~RAvlEgia~~~r~~l~-~l~~~g---~~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~e~~alGAA~l 468 (515)
T 3i8b_A 395 TRENLARAFVEGLLCSQRDCLE-LIRSLG---ASITRILLIGGGAKSEAIRTLAPSIL-GMDVTRP-ATDEYVAIGAARQ 468 (515)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH-HHHHTT---CCCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEE-CCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHHcC---CCCCEEEEECchhcCHHHHHHHHHHh-CCceEec-CCcccHHHHHHHH
Confidence 455543 333333333333332 334433 35689999999999999999999999 7888775 4667899999999
Q ss_pred HHHHcC
Q 005824 381 AAVLSG 386 (675)
Q Consensus 381 a~~l~~ 386 (675)
|+.-.+
T Consensus 469 A~~a~G 474 (515)
T 3i8b_A 469 AAWVLS 474 (515)
T ss_dssp HHHHHH
T ss_pred HHHHcC
Confidence 987655
No 74
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=95.81 E-value=0.0037 Score=46.01 Aligned_cols=43 Identities=23% Similarity=0.443 Sum_probs=35.5
Q ss_pred ccccee-cccccCccCCcccCCCCCCcccccCCCceeccccccc
Q 005824 432 AHDLQL-KNHKILSECNGCKRPAFGLMYRCELCNFNLHIPCMFI 474 (675)
Q Consensus 432 ~H~l~l-~~~~~~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~~ 474 (675)
.|.+.. .....+..|+-|+..+....|+|..|+|..|..|...
T Consensus 10 ~H~F~~~~~~~~pt~C~~C~~~i~kqg~kC~~C~~~cH~kC~~~ 53 (59)
T 1rfh_A 10 GHRFVELALRGGPGWCDLCGREVLRQALRCANCKFTCHSECRSL 53 (59)
T ss_dssp SCCCEECCCSSCCEECTTTCSEECSCCEECTTTSCEECHHHHTT
T ss_pred CCcCeeeeccCCCeEchhcchhhhhCccEeCCCCCeEehhhhhh
Confidence 366666 6667788899999888556699999999999999754
No 75
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=95.80 E-value=0.016 Score=63.20 Aligned_cols=78 Identities=22% Similarity=0.238 Sum_probs=56.8
Q ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccEEEEecCCcChHHHHHHHHHhcCCCcc-cccCCchhhHHhHHHHH
Q 005824 302 TRARFEELNMDLFRKCIKHVDMCLRNGKMDKSRVDDVVIVGGSARIPKVQQLLQEFFNGKRL-CQNINPDEAVAYGAAVQ 380 (675)
Q Consensus 302 tr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v-~~~~~p~~ava~Gaa~~ 380 (675)
++.++ ++-+++.+.-.++..++.... .. ++.|.++||+++++.+.+.+.+.+ +.+| ..+ .+.++.|.|||+.
T Consensus 375 ~~~~l---~RAvlEgia~~~~~~~~~l~~-g~-~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~~-~~~e~~alGaA~l 447 (511)
T 3hz6_A 375 TRAQI---LLAVLEGAALSLRWCAELLGM-EK-VGLLKVVGGGARSEAWLRMIADNL-NVSLLVKP-DAHLHPLRGLAAL 447 (511)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHTG-GG-CCEEEEESGGGGCHHHHHHHHHHH-TCEEEECC-CGGGHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHhc-CC-CCEEEEeCchhcCHHHHHHHHHHH-CCeeEEec-CCCCchHHHHHHH
Confidence 45554 344444444444444433222 24 789999999999999999999999 8888 654 6889999999999
Q ss_pred HHHHcC
Q 005824 381 AAVLSG 386 (675)
Q Consensus 381 a~~l~~ 386 (675)
|+.-.|
T Consensus 448 A~~a~G 453 (511)
T 3hz6_A 448 AAVELE 453 (511)
T ss_dssp HHHHTT
T ss_pred HHHHhC
Confidence 987666
No 76
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=95.76 E-value=0.27 Score=52.20 Aligned_cols=45 Identities=18% Similarity=0.316 Sum_probs=30.1
Q ss_pred cCCceeEeeChhHHHHHHhccccCCCCCceEEEEEeCCCcEEEEEEE
Q 005824 169 AGLNVLKIISEPTAAAIAYGLHRKASSEKNVLIFDLGGGTFDVSLLT 215 (675)
Q Consensus 169 Agl~~v~li~Ep~Aaa~~~~~~~~~~~~~~vlvvDiGggT~dvsv~~ 215 (675)
.|++ +.+.++..|+|++............++++-+|.| .-.+++.
T Consensus 208 ~~~p-V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~giv~ 252 (429)
T 1z05_A 208 TGLP-VFVANDTRAWALAEKLFGHSQDVDNSVLISIHHG-LGAGIVL 252 (429)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEE
T ss_pred hCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCc-EEEEEEE
Confidence 3664 7899999999988644332224567888888887 3445443
No 77
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=95.59 E-value=0.012 Score=41.22 Aligned_cols=30 Identities=20% Similarity=0.448 Sum_probs=26.1
Q ss_pred ccccccCCCCCceeecCCCCcccccccCCCC
Q 005824 511 HCHACARPADGFVYHCEEKGRNLHPCCFNLP 541 (675)
Q Consensus 511 ~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~lp 541 (675)
.|+.|++.+- +.|+|.+|+|..|+.|+...
T Consensus 16 ~C~~C~k~i~-~G~kC~~Ck~~cH~kC~~~v 45 (49)
T 1kbe_A 16 VCNVCQKSMI-FGVKCKHCRLKCHNKCTKEA 45 (49)
T ss_dssp CCSSSCCSSC-CEEEETTTTEEESSSCTTTS
T ss_pred CccccCceeE-CcCCCCCCCCccchhhcCcC
Confidence 4999999874 56999999999999999753
No 78
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=95.58 E-value=0.13 Score=56.51 Aligned_cols=84 Identities=17% Similarity=0.155 Sum_probs=56.0
Q ss_pred eEEEEeHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccEEEEecCCcChHHHHHHHH-HhcCCCcccccCCchhhHHh
Q 005824 297 FSSVITRARFEELNMDLFRKCIKHVDMCLRNGKMDKSRVDDVVIVGGSARIPKVQQLLQ-EFFNGKRLCQNINPDEAVAY 375 (675)
Q Consensus 297 ~~~~itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~-~~~~~~~v~~~~~p~~ava~ 375 (675)
-.+.||..|++++. -.-..|..-++-.|+.++++..+|+.|+|.||++.---+.+.+. ..+|....-....--.+.-.
T Consensus 498 ~~i~itq~DIr~~q-lAKaAi~agi~~Ll~~~gi~~~di~~v~lAGaFG~~l~~~~a~~iGllP~~~~~ki~~vGN~sl~ 576 (631)
T 3zyy_X 498 KDIVITEADIQNLI-RAKAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFGKYLNIKDAITIGLLPDIDINKFSYVGNSSLK 576 (631)
T ss_dssp SCEEEEHHHHHHHH-HHHHHHHHHHHHHHHHTTCCGGGCCEEEEESSSCSEEEHHHHHHHTSSCCSCGGGEEECSCHHHH
T ss_pred CcEEEeHHHHHHHH-HHHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccCCHHHHhhcCCCCCccccCEEEECcHHHH
Confidence 35789999999863 33445667777888999999999999999999998766666665 33443321111112235556
Q ss_pred HHHHHH
Q 005824 376 GAAVQA 381 (675)
Q Consensus 376 Gaa~~a 381 (675)
||.+..
T Consensus 577 GA~~~L 582 (631)
T 3zyy_X 577 GARKAL 582 (631)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 665433
No 79
>2dip_A Zinc finger SWIM domain-containing protein 2; ZZ domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=95.52 E-value=0.0051 Score=50.20 Aligned_cols=44 Identities=30% Similarity=0.567 Sum_probs=35.8
Q ss_pred cccccccC-CCCCceeecCCC-CcccccccCCCCcceeeCCeeeEecCC
Q 005824 510 KHCHACAR-PADGFVYHCEEK-GRNLHPCCFNLPRKLAIGSVEFVLSDK 556 (675)
Q Consensus 510 ~~C~~C~~-~~~g~~Y~C~~C-~f~lH~~Ca~lp~~i~~~~h~~~l~~~ 556 (675)
..||.|+. ++.|+.|+|..| +|||...|..... |..|+|.....
T Consensus 32 v~Cd~C~~~pI~G~RykC~~C~d~DLC~~C~~~~~---H~~H~f~~i~~ 77 (98)
T 2dip_A 32 IPCNNCKQFPIEGKCYKCTECIEYHLCQECFDSYC---HLSHTFTFREK 77 (98)
T ss_dssp CCCSSSCCSSCCSCEEEESSSSSCEEEHHHHHTTS---GGGSCEEECCS
T ss_pred CCCcCCCCCCcccCeEECCCCCCccHHHHHHccCC---CCCCCeeEecC
Confidence 66999997 689999999999 5999999987663 46788766443
No 80
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=95.51 E-value=0.016 Score=63.09 Aligned_cols=80 Identities=16% Similarity=0.215 Sum_probs=55.8
Q ss_pred eHHHHH-HHHHHHHHHHHHHHHHHHHcCCCCCCCccEEEEecCCcChHHHHHHHHHhcCCCcccccCCchhhHHhHHHHH
Q 005824 302 TRARFE-ELNMDLFRKCIKHVDMCLRNGKMDKSRVDDVVIVGGSARIPKVQQLLQEFFNGKRLCQNINPDEAVAYGAAVQ 380 (675)
Q Consensus 302 tr~~~~-~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~ 380 (675)
++.++. .+++.+.-.+...++..-+..+ ..++.|.++||+++++.+.+.+.+.+ +.+|..+ .+.++.|.|||+.
T Consensus 374 ~~~~l~RAvlEgia~~~~~~~~~l~~~~g---~~~~~i~~~GG~aks~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~l 448 (501)
T 3g25_A 374 EKEHFIRATLESLCYQTRDVMEAMSKDSG---IDVQSLRVDGGAVKNNFIMQFQADIV-NTSVERP-EIQETTALGAAFL 448 (501)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHSS---CCCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCCcEEEEecchhcCHHHHHHHHHHh-CCceEec-CCCcchHHHHHHH
Confidence 455543 3333333333333333222233 34689999999999999999999999 7888765 5677999999999
Q ss_pred HHHHcC
Q 005824 381 AAVLSG 386 (675)
Q Consensus 381 a~~l~~ 386 (675)
|+.-.|
T Consensus 449 a~~a~G 454 (501)
T 3g25_A 449 AGLAVG 454 (501)
T ss_dssp HHHHTT
T ss_pred HHHHhC
Confidence 987665
No 81
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=95.49 E-value=0.29 Score=50.97 Aligned_cols=48 Identities=19% Similarity=0.243 Sum_probs=31.7
Q ss_pred ccEEEEecCCcCh-HHHHHHHHHhcC-------CCcccccCCchhhHHhHHHHHHH
Q 005824 335 VDDVVIVGGSARI-PKVQQLLQEFFN-------GKRLCQNINPDEAVAYGAAVQAA 382 (675)
Q Consensus 335 i~~VvLvGG~s~~-p~l~~~l~~~~~-------~~~v~~~~~p~~ava~Gaa~~a~ 382 (675)
++.|+|.||.+.. +.+.+.+++.+. ..++....-.+.+.+.||+..+.
T Consensus 315 P~~IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~~~a~~~GAa~l~~ 370 (380)
T 2hoe_A 315 ISKIVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQEPVIAFGAAVHAL 370 (380)
T ss_dssp CCEEEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCSCHHHHHHHHHHH
T ss_pred CCEEEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 4689999998764 666666665541 22344443456689999998764
No 82
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=95.44 E-value=0.017 Score=64.02 Aligned_cols=52 Identities=21% Similarity=0.332 Sum_probs=45.6
Q ss_pred CCccEEEEecCCc-ChHHHHHHHHHhcCCCcccccCCchhhHHhHHHHHHHHHcC
Q 005824 333 SRVDDVVIVGGSA-RIPKVQQLLQEFFNGKRLCQNINPDEAVAYGAAVQAAVLSG 386 (675)
Q Consensus 333 ~~i~~VvLvGG~s-~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 386 (675)
..++.|.++||++ +++.+.+.+.+.+ +.+|..+ .+.++.|.|||+.|+.-.|
T Consensus 438 ~~~~~i~~~GGga~ks~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G 490 (572)
T 3jvp_A 438 VEVHELYACGGLPQKNHLLMQIFADVT-NREIKVA-ASKQTPALGAAMFASVAAG 490 (572)
T ss_dssp CCEEEEEEESSHHHHCHHHHHHHHHHH-TSCEEEB-CCSSHHHHHHHHHHHHHHC
T ss_pred CCcCEEEEEcCchhhCHHHHHHHHHHH-CCeeEec-CCCccHHHHHHHHHHHhcC
Confidence 4578999999999 9999999999999 7888765 5678999999999987665
No 83
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=95.34 E-value=1 Score=46.01 Aligned_cols=44 Identities=16% Similarity=0.176 Sum_probs=29.3
Q ss_pred cCCceeEeeChhHHHHHHhccccCCCCCceEEEEEeCCCcEEEEEE
Q 005824 169 AGLNVLKIISEPTAAAIAYGLHRKASSEKNVLIFDLGGGTFDVSLL 214 (675)
Q Consensus 169 Agl~~v~li~Ep~Aaa~~~~~~~~~~~~~~vlvvDiGggT~dvsv~ 214 (675)
.+++ +.+.++..|+|++............++++-+|.| .-.+++
T Consensus 131 ~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~v~i~~GtG-iG~gii 174 (343)
T 2yhw_A 131 LHLP-VWVDNDGNCAALAERKFGQGKGLENFVTLITGTG-IGGGII 174 (343)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHTSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCC-EEEEEE
Confidence 3664 7899999999987644322223467888888887 444444
No 84
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=95.26 E-value=0.019 Score=62.54 Aligned_cols=51 Identities=22% Similarity=0.257 Sum_probs=45.1
Q ss_pred CccEEEEecCCcChHHHHHHHHHhcCCCcccccCCchhhHHhHHHHHHHHHcC
Q 005824 334 RVDDVVIVGGSARIPKVQQLLQEFFNGKRLCQNINPDEAVAYGAAVQAAVLSG 386 (675)
Q Consensus 334 ~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 386 (675)
.++.|.++||+++++.+.+.+.+.+ +.+|..+ .+.++.|.|||+.|+.-.|
T Consensus 403 ~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G 453 (506)
T 3h3n_X 403 DIPLLKVDGGAAKNDLLMQFQADIL-DIDVQRA-ANLETTALGAAYLAGLAVG 453 (506)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHH-TSEEEEC-SSSCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEecccccCHHHHHHHHHHh-CCeEEec-CCCcchhHHHHHHHHHHhC
Confidence 4689999999999999999999999 7888765 5677999999999987666
No 85
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=95.26 E-value=0.018 Score=62.90 Aligned_cols=52 Identities=19% Similarity=0.154 Sum_probs=44.9
Q ss_pred CCccEEEEecCCcChHHHHHHHHHhcCCCcccccCCchhhHHhHHHHHHHHHcC
Q 005824 333 SRVDDVVIVGGSARIPKVQQLLQEFFNGKRLCQNINPDEAVAYGAAVQAAVLSG 386 (675)
Q Consensus 333 ~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 386 (675)
..++.|.++||+++++.+.+.+.+.+ +.+|..+.. .++.|.|||+.|+.-.|
T Consensus 399 ~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~~~-~e~~alGaA~lA~~a~G 450 (508)
T 3ifr_A 399 HAPQRFFASDGGTRSRVWMGIMADVL-QRPVQLLAN-PLGSAVGAAWVAAIGGG 450 (508)
T ss_dssp CCCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEEEC-CSTHHHHHHHHHHHHTC
T ss_pred CCCCEEEEeCCcccCHHHHHHHHHHh-CCeEEecCC-CCchHHHHHHHHHHHhC
Confidence 34689999999999999999999999 898887754 45889999999987666
No 86
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.24 E-value=0.017 Score=62.95 Aligned_cols=51 Identities=25% Similarity=0.372 Sum_probs=44.8
Q ss_pred CccEEEEecCCcChHHHHHHHHHhcCCCcccccCCchhhHHhHHHHHHHHHcC
Q 005824 334 RVDDVVIVGGSARIPKVQQLLQEFFNGKRLCQNINPDEAVAYGAAVQAAVLSG 386 (675)
Q Consensus 334 ~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 386 (675)
.++.|.++||+++++.+.+.+.+.+ +.+|..+ .+.++.|.|||+.|+.-.|
T Consensus 401 ~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G 451 (510)
T 2p3r_A 401 RLHALRVDGGAVANNFLMQFQSDIL-GTRVERP-EVREVTALGAAYLAGLAVG 451 (510)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHHHHHHHT
T ss_pred CccEEEEeCchhcCHHHHHHHHHHh-CCceEec-CCCCcHHHHHHHHHHHHhC
Confidence 4689999999999999999999999 7888765 4677999999999987666
No 87
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=95.24 E-value=0.014 Score=63.75 Aligned_cols=51 Identities=20% Similarity=0.122 Sum_probs=43.7
Q ss_pred CccEEEEecCCcChHHHHHHHHHhcCCCcccccCCchhhHHhHHHHHHHHHcC
Q 005824 334 RVDDVVIVGGSARIPKVQQLLQEFFNGKRLCQNINPDEAVAYGAAVQAAVLSG 386 (675)
Q Consensus 334 ~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 386 (675)
.++.|.++||+++++.+.+.+.+.+ +.+|..+ ++.++.|.|||+.|+.-.|
T Consensus 425 ~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~e~~alGAA~lA~~a~G 475 (520)
T 4e1j_A 425 NDTVLRVDGGMVASDWTMQRLSDLL-DAPVDRP-VILETTALGVAWLAGSRAG 475 (520)
T ss_dssp --CCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCCCHHHHHHHHHHHHHHT
T ss_pred CcceEEEeCccccCHHHHHHHHHHh-CCeEEec-CCCccHHHHHHHHHHHHcC
Confidence 4678999999999999999999999 7888765 4677999999999987666
No 88
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=95.19 E-value=0.032 Score=60.63 Aligned_cols=51 Identities=25% Similarity=0.325 Sum_probs=44.2
Q ss_pred CccEEEEecCCcChHHHHHHHHHhcCCCcccccCCchhhHHhHHHHHHHHHcC
Q 005824 334 RVDDVVIVGGSARIPKVQQLLQEFFNGKRLCQNINPDEAVAYGAAVQAAVLSG 386 (675)
Q Consensus 334 ~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 386 (675)
.++.|.++||+++++.+.+.+.+.+ +.+|..+ .+.++.|.|||+.|+.-.+
T Consensus 398 ~~~~i~~~GG~a~n~~~~q~~Adv~-g~pV~~~-~~~e~~alGaA~la~~a~G 448 (495)
T 2dpn_A 398 RLKVLKADGGMAQNRLFLKIQADLL-GVPVAVP-EVTETTALGAALMAGVGAG 448 (495)
T ss_dssp CCCCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHHT
T ss_pred CCcEEEEecccccCHHHHHHHHHHh-CCeeEec-CCcccHHHHHHHHHHhhcC
Confidence 4678999999999999999999999 7888765 4566899999999987655
No 89
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.17 E-value=0.04 Score=60.35 Aligned_cols=80 Identities=16% Similarity=0.192 Sum_probs=56.4
Q ss_pred eHHHHH-HHHHHHHHHHHHHHHHHHHcCCCCCCCccEEEEecCCcChHHHHHHHHHhcCCCcccccCCchhhHHhHHHHH
Q 005824 302 TRARFE-ELNMDLFRKCIKHVDMCLRNGKMDKSRVDDVVIVGGSARIPKVQQLLQEFFNGKRLCQNINPDEAVAYGAAVQ 380 (675)
Q Consensus 302 tr~~~~-~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~ 380 (675)
++.++. .+++.+.-.+...++..-+..+ ..++.|.++||+++++.+.+.+.+.+ +.+|..+ ...++.|.|||+.
T Consensus 372 ~~~~i~RAvlEgia~~~r~~le~l~~~~g---~~~~~i~v~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~E~~alGAA~l 446 (526)
T 3ezw_A 372 NANHIIRATLESIAYQTRDVLEAMQADSG---IRLHALRVDGGAVANNFLMQFQSDIL-GTRVERP-EVREVTALGAAYL 446 (526)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCCCEEEEECchhhCHHHHHHHHHHH-CCEEEeC-CCCchHHHHHHHH
Confidence 455543 3333333333333333323333 35789999999999999999999999 8998776 4567899999999
Q ss_pred HHHHcC
Q 005824 381 AAVLSG 386 (675)
Q Consensus 381 a~~l~~ 386 (675)
|+.-.|
T Consensus 447 A~~a~G 452 (526)
T 3ezw_A 447 AGLAVG 452 (526)
T ss_dssp HHHHTT
T ss_pred HHHHhC
Confidence 987766
No 90
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=94.87 E-value=0.027 Score=61.40 Aligned_cols=80 Identities=18% Similarity=0.184 Sum_probs=55.9
Q ss_pred eHHHHH-HHHHHHHHHHHHHHHHHHHcCCCCCCCccEEEEecCCcChHHHHHHHHHhcCCCcccccCCchhhHHhHHHHH
Q 005824 302 TRARFE-ELNMDLFRKCIKHVDMCLRNGKMDKSRVDDVVIVGGSARIPKVQQLLQEFFNGKRLCQNINPDEAVAYGAAVQ 380 (675)
Q Consensus 302 tr~~~~-~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~ 380 (675)
++.++. .+++.+.-.+...++.+-+..+ ..++.|.++||+++++.+.+.+.+.+ +.+|..+ .+.++.|.|||+.
T Consensus 373 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g---~~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~l 447 (504)
T 2d4w_A 373 NRNHIARAALEATAFQSREVVDAMNADSG---VDLTELRVDGGMVANELLMQFQADQL-GVDVVRP-KVAETTALGAAYA 447 (504)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHS---CCCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCcceEEEeCCcccCHHHHHHHHHHh-CCeEEeC-CCCcchHHHHHHH
Confidence 455543 3344444444444333322223 34678999999999999999999999 7888765 5567999999999
Q ss_pred HHHHcC
Q 005824 381 AAVLSG 386 (675)
Q Consensus 381 a~~l~~ 386 (675)
|+.-.|
T Consensus 448 A~~~~G 453 (504)
T 2d4w_A 448 AGIAVG 453 (504)
T ss_dssp HHHHHT
T ss_pred HHhhcC
Confidence 987665
No 91
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=94.86 E-value=3.8 Score=41.51 Aligned_cols=69 Identities=17% Similarity=0.260 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCccEEEEecCCcChHHHHHHHHHhcC--CCcccccCC---chhhHHhHHHHHHHHHcC
Q 005824 313 LFRKCIKHVDMCLRNGKMDKSRVDDVVIVGGSARIPKVQQLLQEFFN--GKRLCQNIN---PDEAVAYGAAVQAAVLSG 386 (675)
Q Consensus 313 ~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~--~~~v~~~~~---p~~ava~Gaa~~a~~l~~ 386 (675)
+.+.+.+.++++++.. .++.|+|+||-+....+++.|.+.+. +.++..+.. -|.+++.|++.+.....+
T Consensus 233 l~~~l~~~~~~a~~~~-----g~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~g 306 (334)
T 3eno_A 233 AFAMLVEVLERALYVS-----GKDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKSG 306 (334)
T ss_dssp HHHHHHHHHHHHHHHH-----TCSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHc-----CCCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHHcC
Confidence 3444555555555553 34689999999999999999998873 456665543 367899999987766555
No 92
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=94.66 E-value=0.031 Score=60.86 Aligned_cols=80 Identities=16% Similarity=0.119 Sum_probs=54.8
Q ss_pred eHHHHH-HHHHHHHHHHHHHHHHHHHcCCCCCCCc-cEEEEecCCcChHHHHHHHHHhcCCCcccccCCchhhHHhHHHH
Q 005824 302 TRARFE-ELNMDLFRKCIKHVDMCLRNGKMDKSRV-DDVVIVGGSARIPKVQQLLQEFFNGKRLCQNINPDEAVAYGAAV 379 (675)
Q Consensus 302 tr~~~~-~~~~~~~~~i~~~i~~~l~~~~~~~~~i-~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~ 379 (675)
++.++. .+++.+.-.+...++..-+..+ ..+ +.|.++||+++++.+.+.+.+.+ +.+|..+ .+.++.|.|||+
T Consensus 376 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g---~~~~~~i~~~GG~a~s~~~~Q~~Adv~-g~pV~~~-~~~e~~alGaA~ 450 (503)
T 2w40_A 376 ERSHIVRALLEGIAFQLNEIVDSLTSDMG---IEMLHVLRCDGGMTKNKPFMQFNSDII-NTKIEVS-KYKEVTSLGAAV 450 (503)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHT---CSCCSCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCccceEEEeCccccCHHHHHHHHHHH-CCeEEec-CCCcchHHHHHH
Confidence 455543 3344444444433333222122 235 68999999999999999999999 7888765 456689999999
Q ss_pred HHHHHcC
Q 005824 380 QAAVLSG 386 (675)
Q Consensus 380 ~a~~l~~ 386 (675)
.|+.-.|
T Consensus 451 la~~~~G 457 (503)
T 2w40_A 451 LAGLEVK 457 (503)
T ss_dssp HHHHHTT
T ss_pred HHHHHhC
Confidence 9987655
No 93
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=94.65 E-value=2.5 Score=42.83 Aligned_cols=48 Identities=25% Similarity=0.354 Sum_probs=32.1
Q ss_pred HHcCCceeEeeChhHHHHHHhcccc---------C-CCCCceEEEEEeCCCcEEEEEEE
Q 005824 167 AMAGLNVLKIISEPTAAAIAYGLHR---------K-ASSEKNVLIFDLGGGTFDVSLLT 215 (675)
Q Consensus 167 ~~Agl~~v~li~Ep~Aaa~~~~~~~---------~-~~~~~~vlvvDiGggT~dvsv~~ 215 (675)
+..|++.+.+.++..|+|++-.... . ......++++-+|.|-= .+++.
T Consensus 99 ~~~~~p~V~v~NDanaaalgE~~~~~~~~~~~g~g~~~~~~~~~~v~~GTGiG-~giv~ 156 (332)
T 1sz2_A 99 KNLGFSHLEIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGTGLG-VAHLV 156 (332)
T ss_dssp HHHTCSEEEEEEHHHHHHHHGGGCCGGGEEECSSCCCCTTCCEEEEEESSSEE-EEEEE
T ss_pred HHhCCCcEEEEeCHhHHhccccccChhhheecCCCCCCCCCcEEEEEcCccce-EEEEe
Confidence 4458887899999999999865321 0 12346788888998843 44443
No 94
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=94.65 E-value=3 Score=45.48 Aligned_cols=204 Identities=13% Similarity=0.147 Sum_probs=102.2
Q ss_pred CCCcEEEEe-CCCCCHHHHH--HHHHHHHHcCCceeEeeChhHHHHHHhccccCCCCCceEEEEEeCCCcEEEEEEEEeC
Q 005824 142 NVKNAVVTV-PAYFTDSQRQ--ATKDAGAMAGLNVLKIISEPTAAAIAYGLHRKASSEKNVLIFDLGGGTFDVSLLTIGK 218 (675)
Q Consensus 142 ~~~~~vitv-P~~~~~~~r~--~l~~a~~~Agl~~v~li~Ep~Aaa~~~~~~~~~~~~~~vlvvDiGggT~dvsv~~~~~ 218 (675)
+++.+.+|. |..++.-..- .-+..+...+++.+ -++.-+|-+++.....+.... +++-+.||+|.+..+. .
T Consensus 72 ~id~ia~~~gPG~~~~l~vg~~~ak~la~~~~~p~~-~v~h~~aH~~~~~~~~~~~~p---~~l~vsGg~t~~~~~~--~ 145 (540)
T 3en9_A 72 EIDLIAFSQGPGLGPSLRVTATVARTLSLTLKKPII-GVNHCIAHIEIGKLTTEAEDP---LTLYVSGGNTQVIAYV--S 145 (540)
T ss_dssp GCCEEEEEEESSCHHHHHHHHHHHHHHHHHHTCCEE-EEEHHHHHHHHHHHHSSCSSC---EEEEECSSCEEEEEEE--T
T ss_pred HCcEEEEecCCCchhhHHHHHHHHHHHHHHhCCCee-EeccHHHHHHHHHHhcCCCCC---cEEEEcCCCcEEEEEe--C
Confidence 566676665 7665543221 11223334465544 456666666554443332222 6666677888765444 6
Q ss_pred CEEEEEEEcCCCCCcHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHccCCCceEEEEecccCCceeE
Q 005824 219 GIFKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKKKKDISGSPRAVQRLTTACERAKRTLSSTSQTTIEIDSLYEGIDFS 298 (675)
Q Consensus 219 ~~~~~l~~~~~~~~GG~~id~~i~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~~ 298 (675)
+.++++....+ .--|+.||.. ...| +...+..+ .+++| |.+.+.. +.++....+.+++
T Consensus 146 ~~~~~lg~t~d-~s~G~~~D~~-a~~l--------gl~~~gg~-~ie~l---A~~g~~~--------~~~p~~~~~~~~s 203 (540)
T 3en9_A 146 KKYRVFGETLD-IAVGNCLDQF-ARYV--------NLPHPGGP-YIEEL---ARKGKKL--------VDLPYTVKGMDIA 203 (540)
T ss_dssp TEEEEEEEBSS-SCHHHHHHHH-HHHT--------TCCSSCHH-HHHHH---HHTCCCC--------CCCCCCEETTEEC
T ss_pred CceEEEeeccc-hHhHHHHHHH-HHHc--------CCCCCCHH-HHHHH---HHcCCcc--------CcCCCCCCCccee
Confidence 78888887764 4567777743 3222 22222212 22222 2211100 1111101111211
Q ss_pred EE-------------EeHHHHHHHHH-HHHHHHHHHHHHHHHcCCCCCCCccEEEEecCCcChHHHHHHHHHhcC--CCc
Q 005824 299 SV-------------ITRARFEELNM-DLFRKCIKHVDMCLRNGKMDKSRVDDVVIVGGSARIPKVQQLLQEFFN--GKR 362 (675)
Q Consensus 299 ~~-------------itr~~~~~~~~-~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~--~~~ 362 (675)
+. .+.+++...++ .+++-+.+.+.++++..+ ++.|+|+||-+....|++.|++.+. +.+
T Consensus 204 fsgl~~~~~~~~~~~~~~~~ia~~fq~~~~~~l~~~~~~a~~~~~-----~~~~~~~GGVa~N~~l~~~l~~~~~~~~~~ 278 (540)
T 3en9_A 204 FSGLLTAAMRAYDAGERLEDICYSLQEYAFSMLTEITERALAHTN-----KGEVMLVGGVAANNRLREMLKAMCEGQNVD 278 (540)
T ss_dssp CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHHHHHHTTCE
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCeEEEeCcHHhHHHHHHHHHHHHHhcCCE
Confidence 10 12333333333 234444555556665533 4699999999999999999998763 456
Q ss_pred ccccCC---chhhHHhHHH
Q 005824 363 LCQNIN---PDEAVAYGAA 378 (675)
Q Consensus 363 v~~~~~---p~~ava~Gaa 378 (675)
+..+.. -|.++..|.+
T Consensus 279 ~~~p~~~~~~Dngamia~~ 297 (540)
T 3en9_A 279 FYVPPKEFCGDNGAMIAWL 297 (540)
T ss_dssp EECCCHHHHSSCHHHHHHH
T ss_pred EEeCCCcCCCCCHHHHHHH
Confidence 655432 2334555544
No 95
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=94.56 E-value=4.2 Score=40.55 Aligned_cols=62 Identities=16% Similarity=0.097 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCccEEEEecCCcC--hHHHHHHHHHhcCCCcccccCCchhhHHhHHHHHHH
Q 005824 311 MDLFRKCIKHVDMCLRNGKMDKSRVDDVVIVGGSAR--IPKVQQLLQEFFNGKRLCQNINPDEAVAYGAAVQAA 382 (675)
Q Consensus 311 ~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~--~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~ 382 (675)
..++++..+.+-..+...-.. +++.|+|.||.+. .+.+.+.+++.+ . .|+.+.+.||++++.
T Consensus 229 ~~i~~~~~~~L~~~l~~l~~~--~p~~VvlgGgv~~~~~~~l~~~l~~~i-----~---~~~~~~~~GAa~la~ 292 (305)
T 1zc6_A 229 DALLRQAGEDAWAIARALDPQ--DELPVALCGGLGQALRDWLPPGFRQRL-----V---APQGDSAQGALLLLQ 292 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHCTT--CCSCEEEESHHHHHTGGGSCHHHHHHC-----C---CCSSCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHhcC--CCCeEEEECCchHhHHHHHHHHHHhhc-----c---CCCCCHHHHHHHHHh
Confidence 344455555555555443221 5678999998764 456666666653 1 256778999998763
No 96
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=94.51 E-value=1.8 Score=42.93 Aligned_cols=67 Identities=7% Similarity=-0.083 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCccEEEEecCCcCh--HHHHHHHHHhcCCCcccccCCchhhHHhHHHHHHHH
Q 005824 310 NMDLFRKCIKHVDMCLRNGKMDKSRVDDVVIVGGSARI--PKVQQLLQEFFNGKRLCQNINPDEAVAYGAAVQAAV 383 (675)
Q Consensus 310 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~--p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ 383 (675)
...++++..+.+-..+ .... ..+++.|+|.||.+.. +.|++.+++.. .++. .|..+...||+.++..
T Consensus 212 A~~i~~~~~~~La~~i-~~~~-~~~p~~vvlgGGv~~~~~~~l~~~l~~~~--~~i~---~~~~a~~~GA~~la~~ 280 (291)
T 1zbs_A 212 VYSLVQNSFDDFLVRN-VLRY-NRPDLPLHFIGSVAFHYREVLSSVIKKRG--LTLG---SVLQSPMEGLIQYHHN 280 (291)
T ss_dssp HHHHHHHHHHHHHHHH-TGGG-CCTTSCEEEESHHHHHTHHHHHHHHHHTT--CCEE---EEESCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-hccc-CCCCceEEEECchHHhhHHHHHHHHHHcC--Ceec---ccCcCHHHHHHHHHHh
Confidence 3344444455555555 2211 1256789999998776 66666666543 2332 3568889999999864
No 97
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=94.46 E-value=2.1 Score=42.91 Aligned_cols=50 Identities=24% Similarity=0.302 Sum_probs=34.3
Q ss_pred CccEEEEecCCcCh-----HHHHHHHHHhcC------CCcccccCCchhhHHhHHHHHHHH
Q 005824 334 RVDDVVIVGGSARI-----PKVQQLLQEFFN------GKRLCQNINPDEAVAYGAAVQAAV 383 (675)
Q Consensus 334 ~i~~VvLvGG~s~~-----p~l~~~l~~~~~------~~~v~~~~~p~~ava~Gaa~~a~~ 383 (675)
+++.|+|-||.+.. +.+.+.+++.+. ..++....-.+.+.+.||+.++..
T Consensus 239 dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~~ 299 (310)
T 3htv_A 239 DPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAHQ 299 (310)
T ss_dssp CCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHHH
Confidence 45789999988765 457777776652 223444445678999999988853
No 98
>2e5r_A Dystrobrevin alpha; ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.45 E-value=0.014 Score=43.35 Aligned_cols=33 Identities=27% Similarity=0.571 Sum_probs=28.6
Q ss_pred cccccccCC-CCCceeecCCC-CcccccccCCCCc
Q 005824 510 KHCHACARP-ADGFVYHCEEK-GRNLHPCCFNLPR 542 (675)
Q Consensus 510 ~~C~~C~~~-~~g~~Y~C~~C-~f~lH~~Ca~lp~ 542 (675)
..||.|++. +.|+.|+|..| +|||...|.....
T Consensus 12 ~~Cd~C~~~pi~G~RykC~~C~d~DLC~~C~~~g~ 46 (63)
T 2e5r_A 12 VECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGH 46 (63)
T ss_dssp SCCSSSCCCSSCSCEEEESSCSSCEECHHHHHHCC
T ss_pred CCCcCCCCcceecceEEecCCCCchhHHHHHhCCC
Confidence 559999985 89999999999 6999999987654
No 99
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=94.39 E-value=0.21 Score=49.10 Aligned_cols=20 Identities=25% Similarity=0.503 Sum_probs=17.8
Q ss_pred EEEEecccccEEEEEEECCe
Q 005824 9 GIGIDLGTTYSCVGVWQHNR 28 (675)
Q Consensus 9 viGID~GTt~s~va~~~~g~ 28 (675)
++.||+|+|+++.+++++++
T Consensus 2 lL~IDIGNT~ik~gl~~~~~ 21 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFEEGE 21 (268)
T ss_dssp EEEEEECSSEEEEEEEETTE
T ss_pred EEEEEECcCcEEEEEEECCE
Confidence 48899999999999998765
No 100
>2fc7_A ZZZ3 protein; structure genomics, ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=94.27 E-value=0.028 Score=44.16 Aligned_cols=45 Identities=16% Similarity=0.371 Sum_probs=34.9
Q ss_pred cccccccC-CCCCceeecCCCC----cccccccCCCCcc-eee-CCeeeEec
Q 005824 510 KHCHACAR-PADGFVYHCEEKG----RNLHPCCFNLPRK-LAI-GSVEFVLS 554 (675)
Q Consensus 510 ~~C~~C~~-~~~g~~Y~C~~C~----f~lH~~Ca~lp~~-i~~-~~h~~~l~ 554 (675)
..||.|++ ++.|..|+|..|. |||...|...... -.| ..|++...
T Consensus 22 ~~Cd~C~~~pI~G~RykC~~C~d~~~yDLC~~C~~~g~~~~~H~~~H~~~~i 73 (82)
T 2fc7_A 22 FKCDNCGIEPIQGVRWHCQDCPPEMSLDFCDSCSDCLHETDIHKEDHQLEPI 73 (82)
T ss_dssp CCCSSSCCSSEESCEEEESSSCSSSCCEEEGGGTTCCCCCSSCCSSSCEEEE
T ss_pred CCCCCCCCCcceeceEECCcCCCCcceecHHHHHhCccccCCCCCCCCEEEe
Confidence 56999997 6899999999994 9999999977432 233 46777554
No 101
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=94.11 E-value=0.053 Score=58.82 Aligned_cols=47 Identities=23% Similarity=0.264 Sum_probs=40.4
Q ss_pred CccEEEEecCCcChHHHHHHHHHhcCCCcccccCCchhhHHhHHHHHHHH
Q 005824 334 RVDDVVIVGGSARIPKVQQLLQEFFNGKRLCQNINPDEAVAYGAAVQAAV 383 (675)
Q Consensus 334 ~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ 383 (675)
.++.|.++||+++++.+.+.+.+.+ +.+|.... .++.|.||++.|..
T Consensus 393 ~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~~--~e~~alGaa~~A~~ 439 (489)
T 2uyt_A 393 DFSQLHIVGGGCQNTLLNQLCADAC-GIRVIAGP--VEASTLGNIGIQLM 439 (489)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEECC--TTHHHHHHHHHHHH
T ss_pred CCCEEEEeCChhhhHHHHHHHHHHH-CCeeecCC--ccHhHHHHHHHHHH
Confidence 4678999999999999999999999 78887653 68899999777654
No 102
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=93.78 E-value=0.026 Score=41.66 Aligned_cols=43 Identities=28% Similarity=0.488 Sum_probs=33.6
Q ss_pred cccceecccccCccCCcccCCC-CC-CcccccCCCceeccccccc
Q 005824 432 AHDLQLKNHKILSECNGCKRPA-FG-LMYRCELCNFNLHIPCMFI 474 (675)
Q Consensus 432 ~H~l~l~~~~~~~~C~~C~~~~-~g-~~Y~C~~C~f~lH~~Ca~~ 474 (675)
.|.++-++...+..|+-|...+ +| ..|+|.+|.+..|..|-..
T Consensus 8 ~H~F~~kt~~~~~~C~~Cg~~i~~gkq~~kC~dC~~~cH~~C~~~ 52 (61)
T 4b6d_A 8 LHDFVSKTVIKPESCVPCGKRIKFGKLSLKCRDCRVVSHPECRDR 52 (61)
T ss_dssp CCCEEEEECCSCEECTTTCCEECTTCEEEEESSSSCEECGGGGGG
T ss_pred ceeEEeeeccCCcccccccCEEEEeeEeeECCCCCCeEchhHhhc
Confidence 4666666556678899998775 55 4499999999999999643
No 103
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.15 E-value=0.13 Score=40.86 Aligned_cols=31 Identities=23% Similarity=0.450 Sum_probs=26.9
Q ss_pred cccccccCCCCC---ceeecCCCCcccccccCCC
Q 005824 510 KHCHACARPADG---FVYHCEEKGRNLHPCCFNL 540 (675)
Q Consensus 510 ~~C~~C~~~~~g---~~Y~C~~C~f~lH~~Ca~l 540 (675)
-+|+.|++..-| -.|+|..|++..|..|+..
T Consensus 29 t~C~~C~~~l~Gl~kqG~~C~~C~~~~Hk~C~~~ 62 (85)
T 2eli_A 29 TFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVIN 62 (85)
T ss_dssp CBCSSSCCBCCCSSSCEEECSSSCCEEETTTTTT
T ss_pred cCCcccCccccccccCCCcCCCcCCccCHhHHhh
Confidence 459999998766 4699999999999999875
No 104
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.99 E-value=0.13 Score=40.64 Aligned_cols=49 Identities=18% Similarity=0.165 Sum_probs=36.0
Q ss_pred eCCeeeEecCCCCcccccccccccccCCCCCCCCeEEeecCCCeeEeccchHHH
Q 005824 546 IGSVEFVLSDKELSQECIWCESKRLQGSASDNWGWSYVSKCNNYHCHAFCSTEM 599 (675)
Q Consensus 546 ~~~h~~~l~~~~~~~~C~~C~~~~~~~~~~~~~~w~Y~c~~c~~~lH~~C~~~~ 599 (675)
+.+|.|....-.....|+.|++.. +.....-|.|..|+|..|.+|...+
T Consensus 15 ~~~H~F~~~~~~~pt~C~~C~~~l-----wGl~kqg~~C~~C~~~~Hk~C~~~v 63 (83)
T 2yuu_A 15 IKNHEFIATFFGQPTFCSVCKDFV-----WGLNKQGYKCRQCNAAIHKKCIDKI 63 (83)
T ss_dssp GGGCCEEEECCSSCCCCSSSCCCC-----CSSSCCEEEETTTCCEECTTGGGTC
T ss_pred cCCCceEeEeCCCCcChhhcChhh-----ccccccccccCCcCCeeChhhhhhC
Confidence 357777665444556899999865 1112357999999999999999875
No 105
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=92.86 E-value=0.12 Score=38.61 Aligned_cols=31 Identities=26% Similarity=0.560 Sum_probs=26.7
Q ss_pred cccccccCCCCCc---eeecCCCCcccccccCCC
Q 005824 510 KHCHACARPADGF---VYHCEEKGRNLHPCCFNL 540 (675)
Q Consensus 510 ~~C~~C~~~~~g~---~Y~C~~C~f~lH~~Ca~l 540 (675)
.+|+.|++.+-|+ .|+|..|++..|..|+..
T Consensus 24 t~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~ 57 (65)
T 2enz_A 24 TFCEHCGTLLWGLARQGLKCDACGMNVHHRCQTK 57 (65)
T ss_dssp CBCSSSCCBCCCSSSCSEEESSSCCEECTTTTTT
T ss_pred cCchhcChhheecCCcccccCCCCCccCHhHHhh
Confidence 4599999987664 699999999999999865
No 106
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=92.84 E-value=1.2 Score=43.62 Aligned_cols=21 Identities=29% Similarity=0.434 Sum_probs=18.5
Q ss_pred cEEEEecccccEEEEEEECCe
Q 005824 8 LGIGIDLGTTYSCVGVWQHNR 28 (675)
Q Consensus 8 ~viGID~GTt~s~va~~~~g~ 28 (675)
-.++||+|+|+++++++++++
T Consensus 3 MlL~IDIGNT~iK~gl~d~~~ 23 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFDGDE 23 (266)
T ss_dssp CEEEEEECSSEEEEEEEETTE
T ss_pred eEEEEEECCCeEEEEEEECCE
Confidence 369999999999999998764
No 107
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=92.54 E-value=0.03 Score=56.19 Aligned_cols=38 Identities=21% Similarity=0.170 Sum_probs=26.0
Q ss_pred EeeChhHHHHHHhccccCCCCCceEEEEEeCCCcEEEEEEEE
Q 005824 175 KIISEPTAAAIAYGLHRKASSEKNVLIFDLGGGTFDVSLLTI 216 (675)
Q Consensus 175 ~li~Ep~Aaa~~~~~~~~~~~~~~vlvvDiGggT~dvsv~~~ 216 (675)
....-|.|.|...... . ....+++||||+|||+..+.-
T Consensus 109 ~aaanw~ASa~~~A~~-~---~~~~llvDIGsTTTDIipi~~ 146 (334)
T 3cet_A 109 VSASNWCGTAKWVSKN-I---EENCILVDMGSTTTDIIPIVE 146 (334)
T ss_dssp TBCCSSHHHHHHHHHH-T---CSSEEEEEECSSCEEEEEEET
T ss_pred HHhcCHHHHHHHHHHh-c---CCCEEEEEcCcchhhhhhhcC
Confidence 3456677777733222 1 124799999999999998873
No 108
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=92.47 E-value=0.12 Score=38.75 Aligned_cols=49 Identities=16% Similarity=0.177 Sum_probs=34.8
Q ss_pred eCCeeeEecCCCCcccccccccccccCCCCCCCCeEEeecCCCeeEeccchHHH
Q 005824 546 IGSVEFVLSDKELSQECIWCESKRLQGSASDNWGWSYVSKCNNYHCHAFCSTEM 599 (675)
Q Consensus 546 ~~~h~~~l~~~~~~~~C~~C~~~~~~~~~~~~~~w~Y~c~~c~~~lH~~C~~~~ 599 (675)
..+|.|....-..+..|+.|++..- .....-|.|..|++..|.+|...+
T Consensus 7 ~~~H~F~~~~~~~pt~C~~C~~~l~-----Gl~~qg~~C~~C~~~~Hk~C~~~v 55 (65)
T 3uej_A 7 VGSHRFKVYNYMSPTFCDHCGSLLW-----GLVKQGLKCEDCGMNVHHKCREKV 55 (65)
T ss_dssp EEECCEEEECCSSCCBCTTTCCBCC-----SSSSCEEEETTTCCEECHHHHTTS
T ss_pred eCCceEEeEeCCCCCcccccChhhh-----ccCceeeECCCCCCeEchhHhhhC
Confidence 3467766644445568999998651 112357999999999999998764
No 109
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=92.36 E-value=0.47 Score=39.70 Aligned_cols=98 Identities=20% Similarity=0.438 Sum_probs=66.4
Q ss_pred cCccCCcccCCCC-CCcccccCCCceecccccccCCcCccccCCCCCcceEECCCCCCCCCCccccccccccccccCCC-
Q 005824 442 ILSECNGCKRPAF-GLMYRCELCNFNLHIPCMFIDRKPAAKHEFFGNSTFKSLPKLPGICSTRDCRDCNKHCHACARPA- 519 (675)
Q Consensus 442 ~~~~C~~C~~~~~-g~~Y~C~~C~f~lH~~Ca~~~~~~~~~h~~~~~~~l~~~~~~~~~~~~~~~~~~~~~C~~C~~~~- 519 (675)
....|..|...+. ...-.|..|.-.+|..|..++.. +. + ...|.|..+. .|..|++..
T Consensus 6 ~~~~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~-----~~---------~-----~~~W~C~~C~-~C~~C~~~~~ 65 (111)
T 2ysm_A 6 SGANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVT-----PL---------K-----RAGWQCPECK-VCQNCKQSGE 65 (111)
T ss_dssp CCSCBTTTCCCCCTTTSEECSSSCCEECTTTTTCCCC-----TT---------T-----STTCCCTTTC-CCTTTCCCSC
T ss_pred CCCCCcCCCCCCCCcCCeECCCCCCCcChHHhCCccc-----cc---------c-----ccCccCCcCC-cccccCccCC
Confidence 3456999998874 45589999999999999865411 10 0 1234444442 588998865
Q ss_pred CCceeecCCCCcccccccCCCCcceeeCCeeeEecCCCCccccccccccc
Q 005824 520 DGFVYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCESKR 569 (675)
Q Consensus 520 ~g~~Y~C~~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~~~ 569 (675)
......|..|+-..|..|..-|.. . .+...|.|..|....
T Consensus 66 ~~~ll~Cd~C~~~yH~~Cl~ppl~----~------~P~g~W~C~~C~~c~ 105 (111)
T 2ysm_A 66 DSKMLVCDTCDKGYHTFCLQPVMK----S------VPTNGWKCKNCRICI 105 (111)
T ss_dssp CTTEEECSSSCCEEEGGGSSSCCS----S------CCSSCCCCHHHHCCS
T ss_pred CCCeeECCCCCcHHhHHhcCCccc----c------CCCCCcCCcCCcCcC
Confidence 345888999999999999975421 1 112457788886654
No 110
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.10 E-value=0.076 Score=40.93 Aligned_cols=31 Identities=29% Similarity=0.512 Sum_probs=26.8
Q ss_pred cccccccCCCCCc---eeecCCCCcccccccCCC
Q 005824 510 KHCHACARPADGF---VYHCEEKGRNLHPCCFNL 540 (675)
Q Consensus 510 ~~C~~C~~~~~g~---~Y~C~~C~f~lH~~Ca~l 540 (675)
.+|+.|++-.-|+ .|+|..|++.+|..|+..
T Consensus 29 t~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~ 62 (74)
T 2db6_A 29 KFCDVCARMIVLNNKFGLRCKNCKTNIHEHCQSY 62 (74)
T ss_dssp EECSSSCCEECHHHHEEEEESSSCCEECTTTTGG
T ss_pred cCchhcChhhccccCCccccCCCCCccChhHHhh
Confidence 5699999987764 699999999999999863
No 111
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=92.09 E-value=0.14 Score=37.71 Aligned_cols=46 Identities=15% Similarity=0.175 Sum_probs=31.8
Q ss_pred CeeeEecCCCCcccccccccccccCCCCCCCCeEEeecCCCeeEeccchHHH
Q 005824 548 SVEFVLSDKELSQECIWCESKRLQGSASDNWGWSYVSKCNNYHCHAFCSTEM 599 (675)
Q Consensus 548 ~h~~~l~~~~~~~~C~~C~~~~~~~~~~~~~~w~Y~c~~c~~~lH~~C~~~~ 599 (675)
.|.|.-..-..+..|+.|++.. ....+.|.|..|++..|..|-..+
T Consensus 8 ~H~F~~kt~~~~~~C~~Cg~~i------~~gkq~~kC~dC~~~cH~~C~~~~ 53 (61)
T 4b6d_A 8 LHDFVSKTVIKPESCVPCGKRI------KFGKLSLKCRDCRVVSHPECRDRC 53 (61)
T ss_dssp CCCEEEEECCSCEECTTTCCEE------CTTCEEEEESSSSCEECGGGGGGS
T ss_pred ceeEEeeeccCCcccccccCEE------EEeeEeeECCCCCCeEchhHhhcC
Confidence 3444442222346899998865 123588999999999999997643
No 112
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=92.01 E-value=0.086 Score=37.43 Aligned_cols=43 Identities=19% Similarity=0.281 Sum_probs=31.8
Q ss_pred CeeeEecCCCCcccccccccccccCCCCCCCCeEEeecCCCeeEeccchHHH
Q 005824 548 SVEFVLSDKELSQECIWCESKRLQGSASDNWGWSYVSKCNNYHCHAFCSTEM 599 (675)
Q Consensus 548 ~h~~~l~~~~~~~~C~~C~~~~~~~~~~~~~~w~Y~c~~c~~~lH~~C~~~~ 599 (675)
+|.|....-..+..|+.|++.. + .-|.|..|++..|.+|...+
T Consensus 3 ~H~F~~~~~~~pt~C~~C~~~l--------~-qG~~C~~C~~~~H~~C~~~v 45 (52)
T 1faq_A 3 THNFARKTFLKLAFCDICQKFL--------L-NGFRCQTCGYKFHEHCSTKV 45 (52)
T ss_dssp CCCCEEECCSSCEECTTSSSEE--------C-SEEECTTTTCCBCSTTSSSS
T ss_pred CceeEeEeCCCCcCCCCccccc--------c-cCCEeCCCCCeEChhHHhhC
Confidence 4555443333456899999865 3 57999999999999998653
No 113
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=91.95 E-value=0.15 Score=35.74 Aligned_cols=37 Identities=14% Similarity=0.112 Sum_probs=28.1
Q ss_pred CcccccccccccccCCCCCCCCeEEeecCCCeeEeccchHHH
Q 005824 558 LSQECIWCESKRLQGSASDNWGWSYVSKCNNYHCHAFCSTEM 599 (675)
Q Consensus 558 ~~~~C~~C~~~~~~~~~~~~~~w~Y~c~~c~~~lH~~C~~~~ 599 (675)
.+..|+.|++..- .....-|.|..|++..|.+|+..+
T Consensus 10 ~pt~C~~C~~~l~-----g~~~qg~~C~~C~~~~H~~C~~~v 46 (50)
T 1ptq_A 10 SPTFCDHCGSLLW-----GLVKQGLKCEDCGMNVHHKCREKV 46 (50)
T ss_dssp SCCBCTTTCCBCC-----SSSSCEEEETTTCCEECHHHHTTS
T ss_pred CCCCcCCCCceee-----ccCCccCEeCCCCCeECHHHhhhc
Confidence 4468999998651 112367999999999999998653
No 114
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=91.93 E-value=0.13 Score=39.29 Aligned_cols=31 Identities=23% Similarity=0.422 Sum_probs=26.9
Q ss_pred cccccccCCCCCceeecCCCCcccccccCCC
Q 005824 510 KHCHACARPADGFVYHCEEKGRNLHPCCFNL 540 (675)
Q Consensus 510 ~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~l 540 (675)
.+|+.|+.-+..-.|+|..|+|..|..|..+
T Consensus 36 t~C~~C~~~l~~qG~kC~~C~~~cHkkC~~~ 66 (72)
T 2fnf_X 36 GWCDLCGREVLRQALRCANCKFTCHSECRSL 66 (72)
T ss_dssp CBCTTTSSBCSSCCEECTTSSCEECTGGGGG
T ss_pred cchhhhhHHHHhCcCccCCCCCeechhhhcc
Confidence 4599999987556799999999999999864
No 115
>1tot_A CREB-binding protein; zinc binding, CBP, TAZ2, transferase; NMR {Mus musculus} SCOP: g.44.1.6
Probab=91.86 E-value=0.03 Score=39.79 Aligned_cols=31 Identities=23% Similarity=0.539 Sum_probs=26.8
Q ss_pred cccccccCCCCCceeecCCC-CcccccccCCCC
Q 005824 510 KHCHACARPADGFVYHCEEK-GRNLHPCCFNLP 541 (675)
Q Consensus 510 ~~C~~C~~~~~g~~Y~C~~C-~f~lH~~Ca~lp 541 (675)
+.||.|++.+ |..|+|..| +|||...|....
T Consensus 7 ~~Cd~C~~~i-g~R~~C~~C~dyDLC~~C~~~~ 38 (52)
T 1tot_A 7 YTCNECKHHV-ETRWHCTVCEDYDLCINCYNTK 38 (52)
T ss_dssp EEETTTTEEE-SSEEEESSSSSCEECHHHHHHH
T ss_pred EECCCCCCCC-cceEEcCCCCCchhHHHHHhCC
Confidence 6799999985 889999999 599999997653
No 116
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=91.56 E-value=0.25 Score=38.30 Aligned_cols=49 Identities=16% Similarity=0.140 Sum_probs=35.5
Q ss_pred eCCeeeEecCCCCcccccccccccccCCCCCCCCeEEeecCCCeeEeccchHHH
Q 005824 546 IGSVEFVLSDKELSQECIWCESKRLQGSASDNWGWSYVSKCNNYHCHAFCSTEM 599 (675)
Q Consensus 546 ~~~h~~~l~~~~~~~~C~~C~~~~~~~~~~~~~~w~Y~c~~c~~~lH~~C~~~~ 599 (675)
+.+|.|....-..+..|+.|++..- ....--|.|..|+|..|.+|...+
T Consensus 21 ~~~H~F~~~~f~~pt~C~~C~~~lw-----Gl~kqG~~C~~C~~~~Hk~C~~~v 69 (77)
T 2enn_A 21 VKCHEFTATFFPQPTFCSVCHEFVW-----GLNKQGYQCRQCNAAIHKKCIDKV 69 (77)
T ss_dssp SSSCEEEEECCSSCEECSSSCCEEC-----CTTCCEEECSSSCCEEESGGGSSC
T ss_pred CCCCccEEEcCCCCcCccccChhhc-----cccccccCcCCCCCcCCHhHHhhC
Confidence 3578777654445578999998651 112346999999999999998754
No 117
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=91.42 E-value=0.5 Score=45.90 Aligned_cols=21 Identities=19% Similarity=0.346 Sum_probs=18.0
Q ss_pred cEEEEecccccEEEEEEECCe
Q 005824 8 LGIGIDLGTTYSCVGVWQHNR 28 (675)
Q Consensus 8 ~viGID~GTt~s~va~~~~g~ 28 (675)
-.+.||+|+|+++.+++++++
T Consensus 4 M~L~IDIGNT~ik~gl~~~~~ 24 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSITEDGK 24 (249)
T ss_dssp EEEEEEECSSEEEEEEESSSS
T ss_pred eEEEEEECCCeEEEEEEECCE
Confidence 469999999999999987554
No 118
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=91.41 E-value=0.14 Score=38.36 Aligned_cols=47 Identities=15% Similarity=0.179 Sum_probs=32.8
Q ss_pred CeeeEecCCCCcccccccccccccCCCCCCCCeEEeecCCCeeEeccchHHH
Q 005824 548 SVEFVLSDKELSQECIWCESKRLQGSASDNWGWSYVSKCNNYHCHAFCSTEM 599 (675)
Q Consensus 548 ~h~~~l~~~~~~~~C~~C~~~~~~~~~~~~~~w~Y~c~~c~~~lH~~C~~~~ 599 (675)
.|.|....-..+..|+.|++..- ....--|.|..|+|..|.+|...+
T Consensus 13 ~H~F~~~~~~~pt~C~~C~~~l~-----Gl~~qg~~C~~C~~~~Hk~C~~~v 59 (66)
T 1y8f_A 13 QHNFEVWTATTPTYCYECEGLLW-----GIARQGMRCTECGVKCHEKCQDLL 59 (66)
T ss_dssp CCCEEEEECSSCCCCTTTCCCCC-----SSCCEEEEETTTCCEECTTHHHHS
T ss_pred CcccEeeeCCCCcChhhcChhhc-----ccCcceeEcCCCCCeeCHHHHhhC
Confidence 45555533334568999998651 112346999999999999999874
No 119
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=91.37 E-value=0.18 Score=42.34 Aligned_cols=98 Identities=17% Similarity=0.416 Sum_probs=63.0
Q ss_pred ccCCcccCC------C-CCCcccccCCCceecccccccCCcCccccCCCCCcceEECCCCCCCCCCcccccccccccccc
Q 005824 444 SECNGCKRP------A-FGLMYRCELCNFNLHIPCMFIDRKPAAKHEFFGNSTFKSLPKLPGICSTRDCRDCNKHCHACA 516 (675)
Q Consensus 444 ~~C~~C~~~------~-~g~~Y~C~~C~f~lH~~Ca~~~~~~~~~h~~~~~~~l~~~~~~~~~~~~~~~~~~~~~C~~C~ 516 (675)
..|..|... + .+..-.|..|.-..|..|....+. ... ... ...|.|..+. .|.+|+
T Consensus 6 ~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~--~~~---------~~~-----~~~W~C~~C~-~C~vC~ 68 (112)
T 3v43_A 6 PICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPE--LTV---------RVK-----ALRWQCIECK-TCSSCR 68 (112)
T ss_dssp SSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHH--HHH---------HHH-----TSCCCCTTTC-CBTTTC
T ss_pred ccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHH--HHH---------Hhh-----ccccccccCC-cccccc
Confidence 347777554 2 246799999999999999865311 000 000 1235555543 599999
Q ss_pred CCC--CCceeecCCCCcccccccCCCCcceeeCCeeeEecCCCCcccccccccc
Q 005824 517 RPA--DGFVYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCESK 568 (675)
Q Consensus 517 ~~~--~g~~Y~C~~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~~ 568 (675)
+.. .+....|..|+...|..|..-|.. . .+...|.|..|+.+
T Consensus 69 ~~~~~~~~ll~Cd~C~~~yH~~Cl~p~l~----~------~P~~~W~C~~C~~k 112 (112)
T 3v43_A 69 DQGKNADNMLFCDSCDRGFHMECCDPPLT----R------MPKGMWICQICRPR 112 (112)
T ss_dssp CCCCTTCCCEECTTTCCEECGGGCSSCCS----S------CCSSCCCCTTTSCC
T ss_pred CcCCCccceEEcCCCCCeeecccCCCCCC----C------CCCCCeECCCCCCc
Confidence 754 356788999999999999864421 1 12246889998753
No 120
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=91.04 E-value=0.33 Score=52.57 Aligned_cols=76 Identities=21% Similarity=0.253 Sum_probs=47.4
Q ss_pred HHHHHHHHHHcCCceeEeeChhHHHHHHhccccCCCCCceEEEEEeCCCcEEEEEEEEeCCEEEEEEEcCCCCCcHHHHH
Q 005824 159 RQATKDAGAMAGLNVLKIISEPTAAAIAYGLHRKASSEKNVLIFDLGGGTFDVSLLTIGKGIFKVKATAGDTHLGGEDFD 238 (675)
Q Consensus 159 r~~l~~a~~~Agl~~v~li~Ep~Aaa~~~~~~~~~~~~~~vlvvDiGggT~dvsv~~~~~~~~~~l~~~~~~~~GG~~id 238 (675)
.+.+.++-+..|++.-.+-.|-||...+.+.....+. ...+|+|+|||+|.+++++-. . .....+.++|.-.+.
T Consensus 103 ~~fl~~i~~~tG~~ievIsG~EEA~l~~~gv~~~~~~-~~~lvvDIGGGStEl~~~~~~--~---~~~~~Sl~lG~vrl~ 176 (508)
T 3hi0_A 103 PDFIREAEAILGCEIEVLSGEKEALYSAYGVISGFYQ-PDGIAGDLGGGSLELIDIKDK--S---CGEGITLPLGGLRLS 176 (508)
T ss_dssp HHHHHHHHHHHTSCEEECCHHHHHHHHHHHHHHHSSS-CEEEEEEECSSCEEEEEEETT--E---ECCCEEESCCHHHHH
T ss_pred HHHHHHHHHHHCCCeEEecHHHHHHHHHHHHHhcCCC-CCeEEEEeCCCceEEEEeeCC--e---eeeEEEecceEEehh
Confidence 3455556666798765555555665544443332222 235999999999999998732 2 222334688988887
Q ss_pred HH
Q 005824 239 NR 240 (675)
Q Consensus 239 ~~ 240 (675)
+.
T Consensus 177 e~ 178 (508)
T 3hi0_A 177 EQ 178 (508)
T ss_dssp HH
T ss_pred hc
Confidence 64
No 121
>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=91.02 E-value=0.26 Score=38.70 Aligned_cols=53 Identities=11% Similarity=0.157 Sum_probs=37.7
Q ss_pred CcceeeCCeeeEecCCCCcccccccccccccCCCCCCCC--eEEeecCCCeeEeccchHH
Q 005824 541 PRKLAIGSVEFVLSDKELSQECIWCESKRLQGSASDNWG--WSYVSKCNNYHCHAFCSTE 598 (675)
Q Consensus 541 p~~i~~~~h~~~l~~~~~~~~C~~C~~~~~~~~~~~~~~--w~Y~c~~c~~~lH~~C~~~ 598 (675)
+..+.+.+|.|....-..+..|+.|++..- .... --|.|..|.|..|.+|...
T Consensus 17 ~~~~~~~~H~F~~~~~~~PT~Cd~C~~~lW-----Gl~kqp~G~~C~~C~~~~HkrC~~k 71 (84)
T 2row_A 17 SNYICHKGHEFIPTLYHFPTNCEACMKPLW-----HMFKPPPALECRRCHIKCHKDHMDK 71 (84)
T ss_dssp CCCEEETTEEEEEECCSSCEECSSSSSEEC-----CSSSCCCEEEESSSCCEEEHHHHHH
T ss_pred cceEEcCCcceEeEcCCCCcchhhcCHhhh-----ccccCCCCCEecCCCCccchhHhCC
Confidence 344566788887754445568999998651 1111 1899999999999999873
No 122
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=90.94 E-value=0.12 Score=37.83 Aligned_cols=44 Identities=16% Similarity=0.277 Sum_probs=32.9
Q ss_pred CeeeEe-cCCCCcccccccccccccCCCCCCCCeEEeecCCCeeEeccchHHH
Q 005824 548 SVEFVL-SDKELSQECIWCESKRLQGSASDNWGWSYVSKCNNYHCHAFCSTEM 599 (675)
Q Consensus 548 ~h~~~l-~~~~~~~~C~~C~~~~~~~~~~~~~~w~Y~c~~c~~~lH~~C~~~~ 599 (675)
+|.|.. ..-....+|+.|++.. ...-|.|..|+|..|.+|...+
T Consensus 10 ~H~F~~~~~~~~pt~C~~C~~~i--------~kqg~kC~~C~~~cH~kC~~~v 54 (59)
T 1rfh_A 10 GHRFVELALRGGPGWCDLCGREV--------LRQALRCANCKFTCHSECRSLI 54 (59)
T ss_dssp SCCCEECCCSSCCEECTTTCSEE--------CSCCEECTTTSCEECHHHHTTC
T ss_pred CCcCeeeeccCCCeEchhcchhh--------hhCccEeCCCCCeEehhhhhhC
Confidence 566655 3333456899999876 2456999999999999998653
No 123
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=90.66 E-value=0.78 Score=38.31 Aligned_cols=73 Identities=22% Similarity=0.458 Sum_probs=50.6
Q ss_pred ccccccccCCCC-CceeecCCCCcccccccCCCCcceeeCCeeeEecCCCCccc------ccccccccccCCCCCCCCeE
Q 005824 509 NKHCHACARPAD-GFVYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQE------CIWCESKRLQGSASDNWGWS 581 (675)
Q Consensus 509 ~~~C~~C~~~~~-g~~Y~C~~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~------C~~C~~~~~~~~~~~~~~w~ 581 (675)
.-.|..|+..+. .-...|..|.-..|+.|..++... + +...+. |.+|++... ....
T Consensus 7 ~~~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~--------~--~~~~W~C~~C~~C~~C~~~~~-------~~~l 69 (111)
T 2ysm_A 7 GANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTP--------L--KRAGWQCPECKVCQNCKQSGE-------DSKM 69 (111)
T ss_dssp CSCBTTTCCCCCTTTSEECSSSCCEECTTTTTCCCCT--------T--TSTTCCCTTTCCCTTTCCCSC-------CTTE
T ss_pred CCCCcCCCCCCCCcCCeECCCCCCCcChHHhCCcccc--------c--cccCccCCcCCcccccCccCC-------CCCe
Confidence 367999998764 234679999999999999887521 0 112343 445554331 2347
Q ss_pred EeecCCCeeEeccchHH
Q 005824 582 YVSKCNNYHCHAFCSTE 598 (675)
Q Consensus 582 Y~c~~c~~~lH~~C~~~ 598 (675)
-.|..|+-.+|..|+..
T Consensus 70 l~Cd~C~~~yH~~Cl~p 86 (111)
T 2ysm_A 70 LVCDTCDKGYHTFCLQP 86 (111)
T ss_dssp EECSSSCCEEEGGGSSS
T ss_pred eECCCCCcHHhHHhcCC
Confidence 78999999999999864
No 124
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=90.66 E-value=0.23 Score=53.54 Aligned_cols=71 Identities=11% Similarity=0.016 Sum_probs=52.0
Q ss_pred HHHHHHHHHH--HHHHHHHHHHcCCCCCCCccEEEEecCCcChHHHHHHHHHh-cCCCcccccCCchhhHHhHHHHHHHH
Q 005824 307 EELNMDLFRK--CIKHVDMCLRNGKMDKSRVDDVVIVGGSARIPKVQQLLQEF-FNGKRLCQNINPDEAVAYGAAVQAAV 383 (675)
Q Consensus 307 ~~~~~~~~~~--i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~-~~~~~v~~~~~p~~ava~Gaa~~a~~ 383 (675)
..+.+-+++. +.-.++..++.... .+.|.++||+++++.+.+.+.+. | +.+|..+. ..++.|.|||+.|+.
T Consensus 362 ~~l~RA~lE~~Gia~~~r~~l~~~~~----~~~i~~~GG~a~s~~w~Qi~ADv~~-g~pV~~~~-~~e~~alGAA~lA~~ 435 (482)
T 3h6e_A 362 DWFERRAAACLYAALVADTALDLIGS----TGRILVEGRFAEADVFVRALASLRP-DCAVYTAN-AHNDVSFGALRLIDP 435 (482)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTTC----CSEEEEESGGGGCHHHHHHHHHHST-TSEEEEES-SCCCTTGGGHHHHCT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhcC----CCeEEEeCCcccCHHHHHHHhhhcC-CCeEEEcC-CCchHHHHHHHHhCc
Confidence 3444455553 44455555554321 26899999999999999999999 9 89988774 456889999999964
No 125
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=90.62 E-value=0.14 Score=56.95 Aligned_cols=45 Identities=27% Similarity=0.596 Sum_probs=38.0
Q ss_pred eecccceecccccCccCCcccCCCCCCc---ccccCCCceeccccccc
Q 005824 430 HRAHDLQLKNHKILSECNGCKRPAFGLM---YRCELCNFNLHIPCMFI 474 (675)
Q Consensus 430 h~~H~l~l~~~~~~~~C~~C~~~~~g~~---Y~C~~C~f~lH~~Ca~~ 474 (675)
...|.++......+..|+.|+...+|.. |+|..|.|.+|..|...
T Consensus 516 ~~~H~F~~~~~~~~t~C~~C~~~l~gl~~qg~~C~~C~~~vHk~C~~~ 563 (587)
T 3ky9_A 516 ANGHDFQMFSFEETTSCKACQMLLRGTFYQGYRCHRCRASAHKECLGR 563 (587)
T ss_dssp GGGCCEEEECCSSCCBCTTTCSBCCSSSCCEEEETTTCCEECSGGGGG
T ss_pred ccCCceeEEeCCCCcccccccccccccccCCcCCCCCCCccchhhhhc
Confidence 3468888887788999999999987743 99999999999999754
No 126
>1r79_A Diacylglycerol kinase, delta; C1 domain, cystein-rich zinc binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: g.49.1.1
Probab=90.16 E-value=0.21 Score=39.33 Aligned_cols=37 Identities=14% Similarity=0.163 Sum_probs=27.9
Q ss_pred cccccccccccccCCCCCCCCeEEeecCCCeeEeccchHHH
Q 005824 559 SQECIWCESKRLQGSASDNWGWSYVSKCNNYHCHAFCSTEM 599 (675)
Q Consensus 559 ~~~C~~C~~~~~~~~~~~~~~w~Y~c~~c~~~lH~~C~~~~ 599 (675)
+.+|.+|++..... ...--|+|.+|.+++|.+|...+
T Consensus 38 ~s~C~vC~k~c~s~----~~L~g~rC~WCq~~VH~~C~~~~ 74 (84)
T 1r79_A 38 SAKCTVCDKTCGSV----LRLQDWRCLWCKAMVHTSCKESL 74 (84)
T ss_dssp TCBCSSSCCBCCCT----TTCCCEEESSSCCEECHHHHHHC
T ss_pred CCEeCCCCCEeCCc----cCCCCCCCcccChhHHHHHHHhc
Confidence 46999999975221 12234689999999999999887
No 127
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=89.30 E-value=0.2 Score=52.73 Aligned_cols=44 Identities=27% Similarity=0.540 Sum_probs=36.3
Q ss_pred ecccceecccccCccCCcccCCCCCC---cccccCCCceeccccccc
Q 005824 431 RAHDLQLKNHKILSECNGCKRPAFGL---MYRCELCNFNLHIPCMFI 474 (675)
Q Consensus 431 ~~H~l~l~~~~~~~~C~~C~~~~~g~---~Y~C~~C~f~lH~~Ca~~ 474 (675)
..|.....+...+..|+.|+...+|. .|+|..|++.+|..|...
T Consensus 345 ~~h~f~~~~~~~~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~~ 391 (406)
T 2vrw_B 345 NGHDFQMFSFEETTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLGR 391 (406)
T ss_dssp GGCCEEEECCSSCCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGGG
T ss_pred CCCCCccccCCCCCCCccccchhceeCCCCCCCCCCcCccchhhhhh
Confidence 35777766777889999999998774 399999999999999753
No 128
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=88.62 E-value=3.4 Score=42.45 Aligned_cols=45 Identities=24% Similarity=0.332 Sum_probs=30.2
Q ss_pred HcCCceeEeeChhHHHHHHhcccc-------------CCCCCceEEEEEeCCCcEEEEEE
Q 005824 168 MAGLNVLKIISEPTAAAIAYGLHR-------------KASSEKNVLIFDLGGGTFDVSLL 214 (675)
Q Consensus 168 ~Agl~~v~li~Ep~Aaa~~~~~~~-------------~~~~~~~vlvvDiGggT~dvsv~ 214 (675)
..|++ +.+.++..|+|++-.... .....++++++-+|.| +-.+++
T Consensus 107 ~~g~P-V~veNDanaaAlgE~~~G~~p~~~~~l~~~g~~~~~~~~v~l~lGtG-IG~giv 164 (366)
T 3mcp_A 107 IFGIP-VFINNDGSLFAYGEALTGVLPEINRRLREAGSTKRYKNLLGVTLGTG-FGAGVV 164 (366)
T ss_dssp HHCSC-EEEECHHHHHHHHHHHTSHHHHHHHHHHHTTCCCCCCEEEEEEESSS-EEEEEE
T ss_pred HHCCC-EEEechhhHHHHHHHHhCCCcccccccccccccCCCCcEEEEEECCc-ceEEEE
Confidence 34775 789999999999864433 2234577888888866 334444
No 129
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=88.24 E-value=1 Score=45.88 Aligned_cols=72 Identities=15% Similarity=0.202 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCccEEEEecCCcChHHHHHHHHHhcCCCcccccC----CchhhHHhHHHHHHHH
Q 005824 309 LNMDLFRKCIKHVDMCLRNGKMDKSRVDDVVIVGGSARIPKVQQLLQEFFNGKRLCQNI----NPDEAVAYGAAVQAAV 383 (675)
Q Consensus 309 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~----~p~~ava~Gaa~~a~~ 383 (675)
+...+.+=+...|.+.+.... ..++.|+++||+++.|.|.++|++.+++.+|.... +|+.-=|..-|++|..
T Consensus 261 v~ATLt~~TA~sIa~~~~~~~---~~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~aFA~LA~~ 336 (371)
T 3qbx_A 261 IQATLLELSARSISESLLDAQ---PDCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMAFAWLAHR 336 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC---TTCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcc---CCCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHHHHHHHHH
Confidence 334444444455555554322 23578999999999999999999999766665433 3555455556666654
No 130
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=86.79 E-value=4.2 Score=39.66 Aligned_cols=49 Identities=18% Similarity=0.207 Sum_probs=30.6
Q ss_pred CccEEEEecCCcCh-HHHHHHHHHhcCCCcccccCCchhhHHhHHHHHHHHHc
Q 005824 334 RVDDVVIVGGSARI-PKVQQLLQEFFNGKRLCQNINPDEAVAYGAAVQAAVLS 385 (675)
Q Consensus 334 ~i~~VvLvGG~s~~-p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~ 385 (675)
+++.|+|-||.+.. +.+.+.++ ...++....-.+.+.+.||+..+....
T Consensus 214 dP~~IvlgG~i~~~~~~~~~~~~---~~~~i~~s~l~~~a~~~GAa~l~~~~~ 263 (267)
T 1woq_A 214 SPELFIVGGGISKRADEYLPNLR---LRTPIVPAVLRNEAGIVGAAIEIALQH 263 (267)
T ss_dssp CCSEEEEESGGGGGGGGTGGGCC---CSSCEEECSCSTTHHHHHHHHHHHHHC
T ss_pred CCCEEEEeChhhcccHHHHHhhc---cCceEEECCcCCcHHHHHHHHHHHhcc
Confidence 35689988887764 33333332 233455454556789999998875433
No 131
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=86.07 E-value=1.4 Score=46.94 Aligned_cols=56 Identities=11% Similarity=0.074 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHcCCc--eeEeeChhHHHHHHhccccCCCCCceEEEEEeCCCcEEEEEEE
Q 005824 156 DSQRQATKDAGAMAGLN--VLKIISEPTAAAIAYGLHRKASSEKNVLIFDLGGGTFDVSLLT 215 (675)
Q Consensus 156 ~~~r~~l~~a~~~Agl~--~v~li~Ep~Aaa~~~~~~~~~~~~~~vlvvDiGggT~dvsv~~ 215 (675)
..-.+.|+++.++-|++ ++.++++..|++++..+.. .+..+-+=+|-|+=-..+.+
T Consensus 185 ~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~----~~~~iglIlGTG~N~~y~e~ 242 (485)
T 3o8m_A 185 HDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTD----PQTKMGIIIGTGVNGAYYDV 242 (485)
T ss_dssp SBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHC----TTEEEEEEESSSEEEEEEEE
T ss_pred ccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCC----CCcEEEEEEecCcceEEEee
Confidence 44577889999888885 3789999999998876542 34556666777765444444
No 132
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=86.03 E-value=1.5 Score=46.63 Aligned_cols=55 Identities=13% Similarity=0.002 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHcCCc--eeEeeChhHHHHHHhccccCCCCCceEEEEEeCCCcEEEEEEE
Q 005824 157 SQRQATKDAGAMAGLN--VLKIISEPTAAAIAYGLHRKASSEKNVLIFDLGGGTFDVSLLT 215 (675)
Q Consensus 157 ~~r~~l~~a~~~Agl~--~v~li~Ep~Aaa~~~~~~~~~~~~~~vlvvDiGggT~dvsv~~ 215 (675)
.-++.|.++.++.|++ ++.++++..|++++-... ..+.++-+=+|.|+=-..+..
T Consensus 164 ~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~~----~~~~~iglilGTGvgg~~i~~ 220 (457)
T 2yhx_A 164 KLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNYT----DAXIKMGIIFGSGVNAAYWCD 220 (457)
T ss_dssp SBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHH----CTTEEEEEEESSSEEEEEEEC
T ss_pred HHHHHHHHhHhhcCCcceeEEEEecchhhccchhhc----CCccEEEEEECcEEEEEEEEC
Confidence 4567888888766764 489999999999987662 235667777888755444443
No 133
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=85.51 E-value=0.37 Score=40.58 Aligned_cols=74 Identities=18% Similarity=0.385 Sum_probs=48.7
Q ss_pred ccccccCCC--------CCceeecCCCCcccccccCCCCcceeeCCeeeEecCCCCcc------cccccccccccCCCCC
Q 005824 511 HCHACARPA--------DGFVYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQ------ECIWCESKRLQGSASD 576 (675)
Q Consensus 511 ~C~~C~~~~--------~g~~Y~C~~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~------~C~~C~~~~~~~~~~~ 576 (675)
+|+.|.... .+-.-.|..|.-..|+.|+.++..+... .+ ...+ .|.+|++...
T Consensus 3 ~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~------~~-~~~W~C~~C~~C~~C~~~~~------ 69 (114)
T 2kwj_A 3 YCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEA------VK-TYKWQCIECKSCILCGTSEN------ 69 (114)
T ss_dssp CCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHHHHHH------HH-HTTCCCGGGCCCTTTTCCTT------
T ss_pred cCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhhhhhc------cC-CCccCccccCccCcccccCC------
Confidence 488885432 2356779999999999999887543210 01 1223 3555655421
Q ss_pred CCCeEEeecCCCeeEeccchHH
Q 005824 577 NWGWSYVSKCNNYHCHAFCSTE 598 (675)
Q Consensus 577 ~~~w~Y~c~~c~~~lH~~C~~~ 598 (675)
.+-.-.|..|+-.+|..|+..
T Consensus 70 -~~~ll~Cd~C~~~yH~~Cl~p 90 (114)
T 2kwj_A 70 -DDQLLFCDDCDRGYHMYCLNP 90 (114)
T ss_dssp -TTTEEECSSSCCEEETTTSSS
T ss_pred -CCceEEcCCCCccccccccCC
Confidence 345678999999999999874
No 134
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=85.24 E-value=30 Score=37.49 Aligned_cols=80 Identities=16% Similarity=0.150 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHcCCCCCCCccEEEEecCCcChHHHHHHHHHhcCCCcccccC-CchhhHHhHHHHH
Q 005824 303 RARFEELNMDLFRK-CIKHVDMCLRNGKMDKSRVDDVVIVGGSARIPKVQQLLQEFFNGKRLCQNI-NPDEAVAYGAAVQ 380 (675)
Q Consensus 303 r~~~~~~~~~~~~~-i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~-~p~~ava~Gaa~~ 380 (675)
..++...++..+.+ +.+.+..+.+.. .++.|+|+||-+....+.+.|.+..+-.++..+. --|.++++|+|++
T Consensus 280 ~~dIAasfQ~~l~~~L~~~~~~a~~~t-----g~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~ 354 (576)
T 3ven_A 280 YRDLAATAQAALERAVFGLADSVLART-----GERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAA 354 (576)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHH-----TCSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHH
Confidence 45565555544433 444555555543 4679999999999999999998765222444332 3378899999999
Q ss_pred HHHHcCC
Q 005824 381 AAVLSGN 387 (675)
Q Consensus 381 a~~l~~~ 387 (675)
+....+.
T Consensus 355 a~~~~g~ 361 (576)
T 3ven_A 355 VAVELGD 361 (576)
T ss_dssp HHHHTTC
T ss_pred HHHHcCC
Confidence 9877663
No 135
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=85.05 E-value=0.4 Score=51.33 Aligned_cols=43 Identities=23% Similarity=0.564 Sum_probs=36.5
Q ss_pred cccceecccccCccCCcccCCCCCC---cccccCCCceeccccccc
Q 005824 432 AHDLQLKNHKILSECNGCKRPAFGL---MYRCELCNFNLHIPCMFI 474 (675)
Q Consensus 432 ~H~l~l~~~~~~~~C~~C~~~~~g~---~Y~C~~C~f~lH~~Ca~~ 474 (675)
.|.+...+...+..|+-|...++|. -|+|..|.+..|..|...
T Consensus 209 ~h~f~~~~~~~pt~C~~C~~~l~g~~~qg~~C~~C~~~~Hk~C~~~ 254 (463)
T 3cxl_A 209 IHNFKVHTFRGPHWCEYCANFMWGLIAQGVKCADCGLNVHKQCSKM 254 (463)
T ss_dssp CCCEEEECCSSCCBCTTTCCBCCSSSCCEEEETTTCCEECHHHHTT
T ss_pred CcceEEeecCCCCcchhhhhhhhhHHhcCeeccccCcccccccccc
Confidence 4777777777889999999998875 399999999999999754
No 136
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=84.95 E-value=0.48 Score=39.74 Aligned_cols=75 Identities=20% Similarity=0.399 Sum_probs=48.1
Q ss_pred cccccccCC-------CCCceeecCCCCcccccccCCCCcceeeCCeeeEecCCCCcc------cccccccccccCCCCC
Q 005824 510 KHCHACARP-------ADGFVYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQ------ECIWCESKRLQGSASD 576 (675)
Q Consensus 510 ~~C~~C~~~-------~~g~~Y~C~~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~------~C~~C~~~~~~~~~~~ 576 (675)
-+|..|... ..+-...|..|+-..|+.|..+...+... .+...+ .|.+|+..+ +
T Consensus 6 ~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~-------~~~~~W~C~~C~~C~vC~~~~------~ 72 (112)
T 3v43_A 6 PICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVR-------VKALRWQCIECKTCSSCRDQG------K 72 (112)
T ss_dssp SSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHH-------HHTSCCCCTTTCCBTTTCCCC------C
T ss_pred ccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHH-------hhccccccccCCccccccCcC------C
Confidence 348888653 13457889999999999999875333210 011233 355555432 1
Q ss_pred CCCeEEeecCCCeeEeccchH
Q 005824 577 NWGWSYVSKCNNYHCHAFCST 597 (675)
Q Consensus 577 ~~~w~Y~c~~c~~~lH~~C~~ 597 (675)
...-.-.|..|+..+|..|..
T Consensus 73 ~~~~ll~Cd~C~~~yH~~Cl~ 93 (112)
T 3v43_A 73 NADNMLFCDSCDRGFHMECCD 93 (112)
T ss_dssp TTCCCEECTTTCCEECGGGCS
T ss_pred CccceEEcCCCCCeeecccCC
Confidence 123466788999999999985
No 137
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=84.12 E-value=0.72 Score=38.77 Aligned_cols=96 Identities=23% Similarity=0.488 Sum_probs=61.7
Q ss_pred cCCcccCCC--------CCCcccccCCCceecccccccCCcCccccCCCCCcceEECCCCCCCCCCcccccccccccccc
Q 005824 445 ECNGCKRPA--------FGLMYRCELCNFNLHIPCMFIDRKPAAKHEFFGNSTFKSLPKLPGICSTRDCRDCNKHCHACA 516 (675)
Q Consensus 445 ~C~~C~~~~--------~g~~Y~C~~C~f~lH~~Ca~~~~~~~~~h~~~~~~~l~~~~~~~~~~~~~~~~~~~~~C~~C~ 516 (675)
.|+.|.... .+..-.|..|.-..|..|...+. .... ..+ ...|.|..+ ..|..|+
T Consensus 3 ~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~--~~~~---------~~~-----~~~W~C~~C-~~C~~C~ 65 (114)
T 2kwj_A 3 YCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTL--NMTE---------AVK-----TYKWQCIEC-KSCILCG 65 (114)
T ss_dssp CCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCH--HHHH---------HHH-----HTTCCCGGG-CCCTTTT
T ss_pred cCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChh--hhhh---------ccC-----CCccCcccc-CccCccc
Confidence 478886543 23568999999999999986541 1000 000 113444433 3589998
Q ss_pred CCC-CCceeecCCCCcccccccCCCCcceeeCCeeeEecCCCCccccccccc
Q 005824 517 RPA-DGFVYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCES 567 (675)
Q Consensus 517 ~~~-~g~~Y~C~~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~ 567 (675)
+.. .+....|..|+-..|..|..-|.. . .+...|.|..|..
T Consensus 66 ~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~----~------~P~g~W~C~~C~~ 107 (114)
T 2kwj_A 66 TSENDDQLLFCDDCDRGYHMYCLNPPVA----E------PPEGSWSCHLCWE 107 (114)
T ss_dssp CCTTTTTEEECSSSCCEEETTTSSSCCS----S------CCSSCCCCHHHHH
T ss_pred ccCCCCceEEcCCCCccccccccCCCcc----C------CCCCCeECccccc
Confidence 854 566788999999999999985422 1 1124577888864
No 138
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=83.57 E-value=2.2 Score=43.48 Aligned_cols=71 Identities=17% Similarity=0.219 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCccEEEEecCCcChHHHHHHHHHhcCCCccccc----CCchhhHHhHHHHHHH
Q 005824 308 ELNMDLFRKCIKHVDMCLRNGKMDKSRVDDVVIVGGSARIPKVQQLLQEFFNGKRLCQN----INPDEAVAYGAAVQAA 382 (675)
Q Consensus 308 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~----~~p~~ava~Gaa~~a~ 382 (675)
++...+.+=+...|.+.+.... ..+.|+++||+++.|.|.++|++.+++.+|... .+|+.-=|..-|++|.
T Consensus 267 Dv~ATLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aFA~LA~ 341 (370)
T 3cqy_A 267 DIQSTLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAFAWLAM 341 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHHHHHHH
Confidence 3444444445555555554431 346899999999999999999999976555432 2444333444455554
No 139
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=82.47 E-value=3.1 Score=41.51 Aligned_cols=44 Identities=18% Similarity=0.262 Sum_probs=29.6
Q ss_pred cCCceeEeeChhHHHHHHhccccCCCCCceEEEEEeCCCcEEEEEE
Q 005824 169 AGLNVLKIISEPTAAAIAYGLHRKASSEKNVLIFDLGGGTFDVSLL 214 (675)
Q Consensus 169 Agl~~v~li~Ep~Aaa~~~~~~~~~~~~~~vlvvDiGggT~dvsv~ 214 (675)
.|++ +.+.++..|+|++-.........++++++-+|.| .-.+++
T Consensus 97 ~~~p-V~v~NDanaaalaE~~~G~~~~~~~~~~l~~GtG-iG~gii 140 (302)
T 3epq_A 97 MXIP-VGFSTDVNAAALGEFLFGEAXGLDSCLYITIGTG-IGAGAI 140 (302)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEE
Confidence 3664 7899999999988654333334567888888876 334444
No 140
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=80.02 E-value=4.2 Score=33.47 Aligned_cols=70 Identities=20% Similarity=0.393 Sum_probs=50.4
Q ss_pred CccCCcccCCCCCCccccc--CCCceecccccccCCcCccccCCCCCcceEECCCCCCCCCCccccccccccccccCCCC
Q 005824 443 LSECNGCKRPAFGLMYRCE--LCNFNLHIPCMFIDRKPAAKHEFFGNSTFKSLPKLPGICSTRDCRDCNKHCHACARPAD 520 (675)
Q Consensus 443 ~~~C~~C~~~~~g~~Y~C~--~C~f~lH~~Ca~~~~~~~~~h~~~~~~~l~~~~~~~~~~~~~~~~~~~~~C~~C~~~~~ 520 (675)
...|..|+. .|....|. .|+..+|..|..+... | .+.|.|+.+ .|..|++...
T Consensus 15 ~~~C~~C~~--~G~ll~CD~~~Cp~~fH~~Cl~L~~~-------------------P--~g~W~Cp~c--~C~~C~k~~~ 69 (107)
T 4gne_A 15 EDYCFQCGD--GGELVMCDKKDCPKAYHLLCLNLTQP-------------------P--YGKWECPWH--QCDECSSAAV 69 (107)
T ss_dssp CSSCTTTCC--CSEEEECCSTTCCCEECTGGGTCSSC-------------------C--SSCCCCGGG--BCTTTCSBCC
T ss_pred CCCCCcCCC--CCcEeEECCCCCCcccccccCcCCcC-------------------C--CCCEECCCC--CCCcCCCCCC
Confidence 455999984 46678998 8999999999753311 1 123445443 4889998764
Q ss_pred CceeecCCCCcccccccCCC
Q 005824 521 GFVYHCEEKGRNLHPCCFNL 540 (675)
Q Consensus 521 g~~Y~C~~C~f~lH~~Ca~l 540 (675)
|.|..|...+|..|..-
T Consensus 70 ---~~C~~Cp~sfC~~c~~g 86 (107)
T 4gne_A 70 ---SFCEFCPHSFCKDHEKG 86 (107)
T ss_dssp ---EECSSSSCEECTTTCTT
T ss_pred ---cCcCCCCcchhhhccCC
Confidence 89999999999998743
No 141
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=79.63 E-value=5.7 Score=43.91 Aligned_cols=66 Identities=17% Similarity=0.145 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCccEEEEecCCcChHHHHHHHHHhcCCCcccccC---CchhhHHhHHHHHHHH
Q 005824 313 LFRKCIKHVDMCLRNGKMDKSRVDDVVIVGGSARIPKVQQLLQEFFNGKRLCQNI---NPDEAVAYGAAVQAAV 383 (675)
Q Consensus 313 ~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~---~p~~ava~Gaa~~a~~ 383 (675)
+++.+.+.+.++.+.. .++.|+|+||-+...+|++.|++.+.+.++..+. --|.++|.|-++.++.
T Consensus 583 la~~L~~~~~ra~~~~-----g~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 583 LAQGFAALMREQATMR-----GITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 651 (657)
T ss_dssp HHHHHHHHHHHHHHTT-----TCCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-----CCCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 3444455555555543 4579999999999999999999988656665432 2378999999998854
No 142
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=79.00 E-value=6 Score=44.82 Aligned_cols=75 Identities=17% Similarity=0.188 Sum_probs=51.2
Q ss_pred HHHHHHHHHHH-HHHHHHHHHHHHcCCCCCCCccEEEEecCCcChHHHHHHHHHhcC--CCcccccCC---chhhHHhHH
Q 005824 304 ARFEELNMDLF-RKCIKHVDMCLRNGKMDKSRVDDVVIVGGSARIPKVQQLLQEFFN--GKRLCQNIN---PDEAVAYGA 377 (675)
Q Consensus 304 ~~~~~~~~~~~-~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~--~~~v~~~~~---p~~ava~Ga 377 (675)
.++...++..+ +-+.+.+.++.+.. .++.|+|+||-+....|.+.|.+.+. |.++..+.. -|..+|.|.
T Consensus 679 ~dIAasfQ~al~~~L~~~~~~a~~~t-----g~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQ 753 (772)
T 4g9i_A 679 ADIAYSAHLALARAFAHTAVERAREF-----GVKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQ 753 (772)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT-----TCSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-----CcCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHH
Confidence 34444444333 33445555555553 35789999999999999999999874 456655433 278899999
Q ss_pred HHHHHH
Q 005824 378 AVQAAV 383 (675)
Q Consensus 378 a~~a~~ 383 (675)
|++|+.
T Consensus 754 A~iA~~ 759 (772)
T 4g9i_A 754 AFLGGL 759 (772)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888754
No 143
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=78.39 E-value=1.4 Score=47.85 Aligned_cols=28 Identities=29% Similarity=0.340 Sum_probs=19.0
Q ss_pred CCcCCCCcEEEEecccccEEEEEEECCe
Q 005824 1 MARKEGVLGIGIDLGTTYSCVGVWQHNR 28 (675)
Q Consensus 1 M~~~~~~~viGID~GTt~s~va~~~~g~ 28 (675)
|++.....++|||+|||++++++++.+.
T Consensus 1 ~~~~~~~~~lgIDiGtts~k~~l~d~~G 28 (508)
T 3ifr_A 1 MSLAQGRQVIGLDIGTTSTIAILVRLPD 28 (508)
T ss_dssp ------CEEEEEEECSSEEEEEEEETTT
T ss_pred CCcccCCEEEEEEecCcceEEEEECCCC
Confidence 6666555899999999999999986443
No 144
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=77.80 E-value=1.7 Score=31.81 Aligned_cols=48 Identities=23% Similarity=0.500 Sum_probs=36.8
Q ss_pred cccccccCCCCCceeecCCCCcccccccCCCCcceeeCCeeeEecCCCCccccccccccc
Q 005824 510 KHCHACARPADGFVYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCESKR 569 (675)
Q Consensus 510 ~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~~~ 569 (675)
..|..|++. +....|..|+.-.|..|...|..- .+...+.|..|.+++
T Consensus 12 ~~C~vC~~~--g~ll~CD~C~~~fH~~Cl~p~l~~----------~p~g~W~C~~C~~~g 59 (61)
T 2l5u_A 12 DYCEVCQQG--GEIILCDTCPRAYHMVCLDPDMEK----------APEGKWSCPHCEKEG 59 (61)
T ss_dssp SSCTTTSCC--SSEEECSSSSCEEEHHHHCTTCCS----------CCCSSCCCTTGGGGS
T ss_pred CCCccCCCC--CcEEECCCCChhhhhhccCCCCCC----------CCCCceECccccccc
Confidence 679999984 567889999999999999887321 122468899998753
No 145
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=77.75 E-value=1 Score=34.09 Aligned_cols=48 Identities=21% Similarity=0.526 Sum_probs=36.6
Q ss_pred cccccccCCC---CCceeecCCCCcccccccCCCCcceeeCCeeeEecCCCCccccccccccc
Q 005824 510 KHCHACARPA---DGFVYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCESKR 569 (675)
Q Consensus 510 ~~C~~C~~~~---~g~~Y~C~~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~~~ 569 (675)
..|..|++.. .+...-|..|+.-+|..|..+|. + +...|.|..|....
T Consensus 17 ~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~-v-----------P~g~W~C~~C~~~~ 67 (71)
T 2ku3_A 17 AVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY-I-----------PEGQWLCRHCLQSR 67 (71)
T ss_dssp CSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSS-C-----------CSSCCCCHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCc-C-----------CCCCcCCccCcCcC
Confidence 5699998753 45677899999999999998873 1 12468899997643
No 146
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=76.40 E-value=6.7 Score=44.28 Aligned_cols=53 Identities=28% Similarity=0.371 Sum_probs=41.4
Q ss_pred CccEEEEecCCcChHHHHHHHHHhc--CCCcccccC-Cc--hhhHHhHHHHHHHHHcC
Q 005824 334 RVDDVVIVGGSARIPKVQQLLQEFF--NGKRLCQNI-NP--DEAVAYGAAVQAAVLSG 386 (675)
Q Consensus 334 ~i~~VvLvGG~s~~p~l~~~l~~~~--~~~~v~~~~-~p--~~ava~Gaa~~a~~l~~ 386 (675)
.++.|+|+||-+....|++.|.+.+ .+.++..+. -| |.++|.|.|+.++....
T Consensus 693 g~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~~~ 750 (761)
T 3vth_A 693 GINKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKILE 750 (761)
T ss_dssp CCCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHHHT
T ss_pred CCCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHHhc
Confidence 3578999999999999999999887 355665543 23 78999999999875543
No 147
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=76.33 E-value=4 Score=29.73 Aligned_cols=49 Identities=20% Similarity=0.392 Sum_probs=36.0
Q ss_pred ccccccccCCCCCceeecCCCCcccccccCCCCcceeeCCeeeEecCCCCccccccccccc
Q 005824 509 NKHCHACARPADGFVYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCESKR 569 (675)
Q Consensus 509 ~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~~~ 569 (675)
...|..|++. |....|..|+-..|..|...|..- .+...|.|..|..+.
T Consensus 9 ~~~C~vC~~~--g~ll~Cd~C~~~fH~~Cl~ppl~~----------~p~g~W~C~~C~~~~ 57 (61)
T 1mm2_A 9 MEFCRVCKDG--GELLCCDTCPSSYHIHCLNPPLPE----------IPNGEWLCPRCTCPA 57 (61)
T ss_dssp CSSCTTTCCC--SSCBCCSSSCCCBCSSSSSSCCSS----------CCSSCCCCTTTTTTC
T ss_pred CCcCCCCCCC--CCEEEcCCCCHHHcccccCCCcCc----------CCCCccCChhhcCch
Confidence 3669999974 457779999999999999865321 122468899998754
No 148
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=76.01 E-value=4.8 Score=33.11 Aligned_cols=66 Identities=18% Similarity=0.263 Sum_probs=47.9
Q ss_pred ccccccccCCCCCceeecC--CCCcccccccCCCCcceeeCCeeeEecCCCCccc-----ccccccccccCCCCCCCCeE
Q 005824 509 NKHCHACARPADGFVYHCE--EKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQE-----CIWCESKRLQGSASDNWGWS 581 (675)
Q Consensus 509 ~~~C~~C~~~~~g~~Y~C~--~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~-----C~~C~~~~~~~~~~~~~~w~ 581 (675)
..+|..|+. .|-...|. .|..-.|..|..|.... ...|. |..|++. -.
T Consensus 15 ~~~C~~C~~--~G~ll~CD~~~Cp~~fH~~Cl~L~~~P------------~g~W~Cp~c~C~~C~k~-----------~~ 69 (107)
T 4gne_A 15 EDYCFQCGD--GGELVMCDKKDCPKAYHLLCLNLTQPP------------YGKWECPWHQCDECSSA-----------AV 69 (107)
T ss_dssp CSSCTTTCC--CSEEEECCSTTCCCEECTGGGTCSSCC------------SSCCCCGGGBCTTTCSB-----------CC
T ss_pred CCCCCcCCC--CCcEeEECCCCCCcccccccCcCCcCC------------CCCEECCCCCCCcCCCC-----------CC
Confidence 467999995 35688898 89999999999854321 12343 4555553 23
Q ss_pred EeecCCCeeEeccchHHH
Q 005824 582 YVSKCNNYHCHAFCSTEM 599 (675)
Q Consensus 582 Y~c~~c~~~lH~~C~~~~ 599 (675)
|+|..|...+|..|....
T Consensus 70 ~~C~~Cp~sfC~~c~~g~ 87 (107)
T 4gne_A 70 SFCEFCPHSFCKDHEKGA 87 (107)
T ss_dssp EECSSSSCEECTTTCTTS
T ss_pred cCcCCCCcchhhhccCCc
Confidence 899999999999998664
No 149
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=75.07 E-value=1.4 Score=34.90 Aligned_cols=44 Identities=20% Similarity=0.517 Sum_probs=31.8
Q ss_pred ecccceecccccCccCCcccCCCCCCcccccC--CCceeccccccc
Q 005824 431 RAHDLQLKNHKILSECNGCKRPAFGLMYRCEL--CNFNLHIPCMFI 474 (675)
Q Consensus 431 ~~H~l~l~~~~~~~~C~~C~~~~~g~~Y~C~~--C~f~lH~~Ca~~ 474 (675)
++|.+........-.|..|+....|..-.|.. |.-.+|..||..
T Consensus 5 ~~~~~NIp~~R~~l~C~iC~~~~~GAciqC~~~~C~~~fHv~CA~~ 50 (87)
T 2lq6_A 5 HHHHMNIPPARWKLTCYLCKQKGVGASIQCHKANCYTAFHVTCAQK 50 (87)
T ss_dssp ----CCCCCCCCCCCBTTTTBCCSSCEEECSCTTTCCEEEHHHHHH
T ss_pred cccccCCChHHhcCCCcCCCCCCCcEeEecCCCCCCCcCcHHHHHH
Confidence 33555555444556799999887888899975 999999999864
No 150
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=74.93 E-value=2.2 Score=32.32 Aligned_cols=35 Identities=20% Similarity=0.531 Sum_probs=27.7
Q ss_pred ccCccCCcccCCC---CCCcccccCCCceecccccccC
Q 005824 441 KILSECNGCKRPA---FGLMYRCELCNFNLHIPCMFID 475 (675)
Q Consensus 441 ~~~~~C~~C~~~~---~g~~Y~C~~C~f~lH~~Ca~~~ 475 (675)
.....|..|+... .+..-.|..|+--+|..|...|
T Consensus 14 ~~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~ 51 (71)
T 2ku3_A 14 DEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVP 51 (71)
T ss_dssp CSSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCS
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCC
Confidence 3456699998775 3466899999999999998654
No 151
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=74.48 E-value=11 Score=39.71 Aligned_cols=56 Identities=13% Similarity=0.127 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHcCCc--eeEeeChhHHHHHHhccccCCCCCceEEEEEeCCCcEEEEEEE
Q 005824 156 DSQRQATKDAGAMAGLN--VLKIISEPTAAAIAYGLHRKASSEKNVLIFDLGGGTFDVSLLT 215 (675)
Q Consensus 156 ~~~r~~l~~a~~~Agl~--~v~li~Ep~Aaa~~~~~~~~~~~~~~vlvvDiGggT~dvsv~~ 215 (675)
..-++.|+++.++.|++ ++.++++..|++++-.... ...++-+=+|.|+=-..+.+
T Consensus 172 ~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~~----~~~~iglIlGTG~na~yve~ 229 (451)
T 1bdg_A 172 HNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALED----PKCAVGLIVGTGTNVAYIED 229 (451)
T ss_dssp SBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTC----TTEEEEEEESSSEEEEEEEE
T ss_pred CcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhcccC----CCcEEEEEEeCCcceEEEEc
Confidence 45578888888877875 3589999999998866553 34666666787754433333
No 152
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=74.24 E-value=6.7 Score=30.93 Aligned_cols=48 Identities=17% Similarity=0.313 Sum_probs=34.7
Q ss_pred ccccccccCCCCCceeecCCCCcccccccCCCCcceeeCCeeeEecCCCCcccccccccc
Q 005824 509 NKHCHACARPADGFVYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCESK 568 (675)
Q Consensus 509 ~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~~ 568 (675)
...|..|++.. -...|..|+...|..|..-|..- .+...|.|..|...
T Consensus 25 ~~~C~vC~~~g--~LL~CD~C~~~fH~~Cl~PpL~~----------~P~g~W~C~~C~~~ 72 (88)
T 1fp0_A 25 ATICRVCQKPG--DLVMCNQCEFCFHLDCHLPALQD----------VPGEEWSCSLCHVL 72 (88)
T ss_dssp SSCCSSSCSSS--CCEECTTSSCEECTTSSSTTCCC----------CCSSSCCCCSCCCC
T ss_pred CCcCcCcCCCC--CEEECCCCCCceecccCCCCCCC----------CcCCCcCCccccCC
Confidence 46799999864 46779999999999998544311 12256889999743
No 153
>1r79_A Diacylglycerol kinase, delta; C1 domain, cystein-rich zinc binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: g.49.1.1
Probab=73.79 E-value=3.7 Score=32.15 Aligned_cols=41 Identities=22% Similarity=0.475 Sum_probs=30.2
Q ss_pred ccceecccccCccCCcccCCCCC----CcccccCCCceecccccc
Q 005824 433 HDLQLKNHKILSECNGCKRPAFG----LMYRCELCNFNLHIPCMF 473 (675)
Q Consensus 433 H~l~l~~~~~~~~C~~C~~~~~g----~~Y~C~~C~f~lH~~Ca~ 473 (675)
|...--+.....+|..|++.... .-|+|.=|...+|..|..
T Consensus 28 H~WveGNl~~~s~C~vC~k~c~s~~~L~g~rC~WCq~~VH~~C~~ 72 (84)
T 1r79_A 28 HQWLEGNLPVSAKCTVCDKTCGSVLRLQDWRCLWCKAMVHTSCKE 72 (84)
T ss_dssp CCEEESCCCTTCBCSSSCCBCCCTTTCCCEEESSSCCEECHHHHH
T ss_pred eeEEccCCCCCCEeCCCCCEeCCccCCCCCCCcccChhHHHHHHH
Confidence 44443344456789999998543 239999999999999964
No 154
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=73.39 E-value=2.3 Score=34.51 Aligned_cols=21 Identities=14% Similarity=0.115 Sum_probs=18.0
Q ss_pred CcEEEEecccccEEEEEEECC
Q 005824 7 VLGIGIDLGTTYSCVGVWQHN 27 (675)
Q Consensus 7 ~~viGID~GTt~s~va~~~~g 27 (675)
|.++|||+|+..+.+|+.++.
T Consensus 1 mriLglD~G~kriGvAvsd~~ 21 (98)
T 1iv0_A 1 MRVGALDVGEARIGLAVGEEG 21 (98)
T ss_dssp CCEEEEEESSSEEEEEEECSC
T ss_pred CcEEEEEeCCCEEEEEEEeCC
Confidence 358999999999999998654
No 155
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=72.99 E-value=3.6 Score=42.03 Aligned_cols=20 Identities=25% Similarity=0.561 Sum_probs=17.4
Q ss_pred CceEEEEEeCCCcEEEEEEE
Q 005824 196 EKNVLIFDLGGGTFDVSLLT 215 (675)
Q Consensus 196 ~~~vlvvDiGggT~dvsv~~ 215 (675)
.++++|+|+|||+|.++...
T Consensus 139 ~~t~~v~DiGGGStei~~~~ 158 (353)
T 3aap_A 139 NKSVGVMDMGGASVQIVFPM 158 (353)
T ss_dssp SSCEEEEEECSSEEEEEEEC
T ss_pred cccEEEEEeCCCceEEEEec
Confidence 35799999999999999873
No 156
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=71.09 E-value=2.5 Score=45.73 Aligned_cols=24 Identities=38% Similarity=0.437 Sum_probs=19.3
Q ss_pred CCcCCCCcEEEEecccccEEEEEEECC
Q 005824 1 MARKEGVLGIGIDLGTTYSCVGVWQHN 27 (675)
Q Consensus 1 M~~~~~~~viGID~GTt~s~va~~~~g 27 (675)
|+|+ .++|||+|||++++++++.+
T Consensus 1 M~m~---~~lgIDiGtts~K~~l~d~~ 24 (504)
T 3ll3_A 1 MSLK---YIIGMDVGTTATKGVLYDIN 24 (504)
T ss_dssp -CCE---EEEEEEECSSEEEEEEEETT
T ss_pred CCCC---EEEEEEecCCceEEEEEcCC
Confidence 6553 89999999999999998644
No 157
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=70.09 E-value=4.4 Score=28.89 Aligned_cols=47 Identities=23% Similarity=0.520 Sum_probs=34.0
Q ss_pred ccccccccCCCCCceeecCCCCcccccccCCCCcceeeCCeeeEecCCCCccccccccc
Q 005824 509 NKHCHACARPADGFVYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCES 567 (675)
Q Consensus 509 ~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~ 567 (675)
...|..|++. +....|..|+--.|..|...|..- .+...+.|..|.+
T Consensus 9 ~~~C~vC~~~--g~ll~Cd~C~~~~H~~Cl~ppl~~----------~p~g~W~C~~C~~ 55 (56)
T 2yql_A 9 EDFCSVCRKS--GQLLMCDTCSRVYHLDCLDPPLKT----------IPKGMWICPRCQD 55 (56)
T ss_dssp CCSCSSSCCS--SCCEECSSSSCEECSSSSSSCCCS----------CCCSSCCCHHHHC
T ss_pred CCCCccCCCC--CeEEEcCCCCcceECccCCCCcCC----------CCCCceEChhhhC
Confidence 3679999985 457789999999999999855321 1124577888854
No 158
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=69.69 E-value=3.4 Score=34.63 Aligned_cols=42 Identities=17% Similarity=0.319 Sum_probs=28.5
Q ss_pred CceeecCCCCcccccccCCCCcceeeCCeeeEecCCCCcccccccccc
Q 005824 521 GFVYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCESK 568 (675)
Q Consensus 521 g~~Y~C~~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~~ 568 (675)
...-.|..|+--+|..|..++.....+. .....+.|..|...
T Consensus 73 ~~m~~C~~C~~~~H~~C~~~~~~~~~~~------~~~~~~~C~~C~~~ 114 (117)
T 4bbq_A 73 KKLMECCICNEIVHPGCLQMDGEGLLNE------ELPNCWECPKCYQE 114 (117)
T ss_dssp GSCEEETTTCCEECGGGCCSCCCCEECS------SSSSEEECTTTC--
T ss_pred cceEEeeecCCeEECCCCCCCccccccc------cCCCCeECCCCcCC
Confidence 3456899999999999999875443332 22245789888764
No 159
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=69.68 E-value=3.5 Score=45.49 Aligned_cols=48 Identities=15% Similarity=0.200 Sum_probs=36.9
Q ss_pred CCeeeEecCCCCcccccccccccccCCCCCCCCeEEeecCCCeeEeccchHHH
Q 005824 547 GSVEFVLSDKELSQECIWCESKRLQGSASDNWGWSYVSKCNNYHCHAFCSTEM 599 (675)
Q Consensus 547 ~~h~~~l~~~~~~~~C~~C~~~~~~~~~~~~~~w~Y~c~~c~~~lH~~C~~~~ 599 (675)
.+|.|....-..+..|..|+...- .....-|+|..|++.+|.+|...+
T Consensus 517 ~~H~F~~~~~~~~t~C~~C~~~l~-----gl~~qg~~C~~C~~~vHk~C~~~v 564 (587)
T 3ky9_A 517 NGHDFQMFSFEETTSCKACQMLLR-----GTFYQGYRCHRCRASAHKECLGRV 564 (587)
T ss_dssp GGCCEEEECCSSCCBCTTTCSBCC-----SSSCCEEEETTTCCEECSGGGGGS
T ss_pred cCCceeEEeCCCCccccccccccc-----ccccCCcCCCCCCCccchhhhhcC
Confidence 467777765556678999998641 223457999999999999999986
No 160
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=69.10 E-value=3.3 Score=44.83 Aligned_cols=23 Identities=30% Similarity=0.297 Sum_probs=18.8
Q ss_pred CCcCCCCcEEEEecccccEEEEEEE
Q 005824 1 MARKEGVLGIGIDLGTTYSCVGVWQ 25 (675)
Q Consensus 1 M~~~~~~~viGID~GTt~s~va~~~ 25 (675)
|+.. +.++|||+|||++++++++
T Consensus 1 m~~~--~~~lgIDiGtts~ka~l~d 23 (515)
T 3i8b_A 1 MSLR--TLVAGVDTSTQSCKVRVTD 23 (515)
T ss_dssp -CCS--CEEEEEEECSSEEEEEEEE
T ss_pred CCCC--cEEEEEEeccccEEEEEEE
Confidence 5443 2899999999999999987
No 161
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=68.65 E-value=5.9 Score=29.35 Aligned_cols=48 Identities=21% Similarity=0.456 Sum_probs=35.6
Q ss_pred cccccccCCCCCceeecCCCCcccccccCCCCcceeeCCeeeEecCCCCccccccccccc
Q 005824 510 KHCHACARPADGFVYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCESKR 569 (675)
Q Consensus 510 ~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~~~ 569 (675)
..|..|+.. |....|..|+--.|..|...|..- .+...|.|..|....
T Consensus 9 ~~C~vC~~~--g~ll~CD~C~~~fH~~Cl~ppl~~----------~P~g~W~C~~C~~~~ 56 (66)
T 1xwh_A 9 DECAVCRDG--GELICCDGCPRAFHLACLSPPLRE----------IPSGTWRCSSCLQAT 56 (66)
T ss_dssp CSBSSSSCC--SSCEECSSCCCEECTTTSSSCCSS----------CCSSCCCCHHHHHTC
T ss_pred CCCccCCCC--CCEEEcCCCChhhcccccCCCcCc----------CCCCCeECccccCcc
Confidence 569999975 457789999999999999854321 112468899997654
No 162
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=68.16 E-value=3.5 Score=44.56 Aligned_cols=25 Identities=40% Similarity=0.472 Sum_probs=19.4
Q ss_pred CCcCCCCcEEEEecccccEEEEEEECC
Q 005824 1 MARKEGVLGIGIDLGTTYSCVGVWQHN 27 (675)
Q Consensus 1 M~~~~~~~viGID~GTt~s~va~~~~g 27 (675)
|++.+ .++|||+|||++++++++..
T Consensus 1 m~~~~--~~lgIDiGtts~k~~l~d~~ 25 (506)
T 3h3n_X 1 MAEKN--YVMAIDQGTTSSRAIIFDRN 25 (506)
T ss_dssp -CCCC--EEEEEEECSSEEEEEEEETT
T ss_pred CCCCC--EEEEEEcCCCceEEEEECCC
Confidence 65432 89999999999999998643
No 163
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=67.23 E-value=9.7 Score=30.73 Aligned_cols=47 Identities=21% Similarity=0.522 Sum_probs=35.2
Q ss_pred cccccccCCC-CCceeecCCCCcccccccCCCCcceeeCCeeeEecCCCCcccccccccc
Q 005824 510 KHCHACARPA-DGFVYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCESK 568 (675)
Q Consensus 510 ~~C~~C~~~~-~g~~Y~C~~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~~ 568 (675)
..| .|+... .++...|..|+--.|..|..+|..- .+ ..+.|..|..+
T Consensus 29 vrC-iC~~~~~~~~mi~Cd~C~~w~H~~C~~~~~~~----------~p-~~w~C~~C~~~ 76 (98)
T 2lv9_A 29 TRC-ICGFTHDDGYMICCDKCSVWQHIDCMGIDRQH----------IP-DTYLCERCQPR 76 (98)
T ss_dssp CCC-TTSCCSCSSCEEEBTTTCBEEETTTTTCCTTS----------CC-SSBCCTTTSSS
T ss_pred EEe-ECCCccCCCcEEEcCCCCCcCcCcCCCCCccC----------CC-CCEECCCCcCC
Confidence 457 788754 6788999999999999999886421 01 24889999754
No 164
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=67.20 E-value=6.4 Score=29.21 Aligned_cols=48 Identities=17% Similarity=0.320 Sum_probs=35.0
Q ss_pred cccccccCCCCCceeecCCCCcccccccCCCCcceeeCCeeeEecCCCCccccccccccc
Q 005824 510 KHCHACARPADGFVYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCESKR 569 (675)
Q Consensus 510 ~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~~~ 569 (675)
..|..|++.. -...|..|+...|..|...|..- .+...|.|..|....
T Consensus 13 ~~C~vC~~~~--~ll~Cd~C~~~~H~~Cl~P~l~~----------~P~g~W~C~~C~~~~ 60 (66)
T 2lri_C 13 ARCGVCGDGT--DVLRCTHCAAAFHWRCHFPAGTS----------RPGTGLRCRSCSGDV 60 (66)
T ss_dssp CCCTTTSCCT--TCEECSSSCCEECHHHHCTTTCC----------CCSSSCCCTTTTTCC
T ss_pred CCcCCCCCCC--eEEECCCCCCceecccCCCccCc----------CCCCCEECccccCCC
Confidence 4599999754 46779999999999998655321 122458899997643
No 165
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=65.95 E-value=5.8 Score=31.54 Aligned_cols=47 Identities=21% Similarity=0.405 Sum_probs=36.3
Q ss_pred cccccccCCCCCceeecCC--CCc-ccccccCCCCcceeeCCeeeEecCCCCccccccccccc
Q 005824 510 KHCHACARPADGFVYHCEE--KGR-NLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCESKR 569 (675)
Q Consensus 510 ~~C~~C~~~~~g~~Y~C~~--C~f-~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~~~ 569 (675)
.+| .|++.-.|+.-.|.. |.+ -+|..|+.|+... ...|.|..|....
T Consensus 37 ~yC-iC~~~~~g~MI~CD~~dC~~~WfH~~CVgl~~~p------------~g~W~Cp~C~~~~ 86 (91)
T 1weu_A 37 TYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKP------------RGKWFCPRCSQES 86 (91)
T ss_dssp BCS-TTCCBCCSCCCCCSCSSCSCCCCCSTTTTCSSCC------------CSSCCCTTTCCCC
T ss_pred cEE-ECCCCCCCCEeEecCCCCCCCCEecccCCcCcCC------------CCCEECcCccCcC
Confidence 678 999977788889998 664 5999999987532 1358899998754
No 166
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=65.60 E-value=20 Score=41.69 Aligned_cols=54 Identities=13% Similarity=0.214 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHcC-C--ceeEeeChhHHHHHHhccccCCCCCceEEEEEeCCCcEEEEEE
Q 005824 157 SQRQATKDAGAMAG-L--NVLKIISEPTAAAIAYGLHRKASSEKNVLIFDLGGGTFDVSLL 214 (675)
Q Consensus 157 ~~r~~l~~a~~~Ag-l--~~v~li~Ep~Aaa~~~~~~~~~~~~~~vlvvDiGggT~dvsv~ 214 (675)
.-++.|.++..+.| + .++.++++..|++++-... ....++.+=+|-|+=-..+.
T Consensus 184 ~v~~~L~~~l~r~g~~pv~~val~NDa~~tll~e~~~----~~~~~iglilGTGvngg~i~ 240 (917)
T 1cza_N 184 DVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYD----DQHCEVGLIIGTGTNACYME 240 (917)
T ss_dssp BHHHHHHHHHHHHCSCCCCEEEEECHHHHHHHHHHHH----CTTEEEEEEESSSEEEEEEE
T ss_pred chHHHHHHHHhhcCCCCceEEEEEEhhHHHHHHhhcc----CCCcEEEEEEECCcceEEEe
Confidence 44677788887666 5 4799999999999987654 23566777778775433333
No 167
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=65.43 E-value=3.9 Score=44.70 Aligned_cols=20 Identities=35% Similarity=0.557 Sum_probs=17.9
Q ss_pred cEEEEecccccEEEEEEECC
Q 005824 8 LGIGIDLGTTYSCVGVWQHN 27 (675)
Q Consensus 8 ~viGID~GTt~s~va~~~~g 27 (675)
.+||||+|||++++++++.+
T Consensus 6 ~~lgIDiGtts~ka~l~d~~ 25 (554)
T 3l0q_A 6 YFIGVDVGTGSARAGVFDLQ 25 (554)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred EEEEEEECcccEEEEEECCC
Confidence 89999999999999998644
No 168
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=64.79 E-value=6.7 Score=35.85 Aligned_cols=48 Identities=17% Similarity=0.360 Sum_probs=35.4
Q ss_pred cccccccCCCCCceeecCCCCcccccccCCCCcceeeCCeeeEecCCCCccccccccccc
Q 005824 510 KHCHACARPADGFVYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCESKR 569 (675)
Q Consensus 510 ~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~~~ 569 (675)
-.|..|++.+ -...|..|+...|..|...|.. . .+...|.|..|....
T Consensus 5 ~~C~~C~~~g--~ll~Cd~C~~~~H~~C~~p~l~----~------~p~~~W~C~~C~~~~ 52 (184)
T 3o36_A 5 DWCAVCQNGG--ELLCCEKCPKVFHLSCHVPTLT----N------FPSGEWICTFCRDLS 52 (184)
T ss_dssp SSCTTTCCCS--SCEECSSSSCEECTTTSSSCCS----S------CCSSCCCCTTTSCSS
T ss_pred CccccCCCCC--eeeecCCCCcccCccccCCCCC----C------CCCCCEECccccCcc
Confidence 5699999764 3778999999999999755432 1 122468899998764
No 169
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=64.33 E-value=4.1 Score=42.53 Aligned_cols=49 Identities=14% Similarity=0.156 Sum_probs=35.8
Q ss_pred CCeeeEecCCCCcccccccccccccCCCCCCCCeEEeecCCCeeEeccchHHHH
Q 005824 547 GSVEFVLSDKELSQECIWCESKRLQGSASDNWGWSYVSKCNNYHCHAFCSTEML 600 (675)
Q Consensus 547 ~~h~~~l~~~~~~~~C~~C~~~~~~~~~~~~~~w~Y~c~~c~~~lH~~C~~~~~ 600 (675)
.+|.+..........|..|+.... ....--|+|..|++.+|.+|...+.
T Consensus 345 ~~h~f~~~~~~~~t~C~~C~~~~~-----g~~~qg~~C~~C~~~~h~~C~~~~~ 393 (406)
T 2vrw_B 345 NGHDFQMFSFEETTSCKACQMLLR-----GTFYQGYRCYRCRAPAHKECLGRVP 393 (406)
T ss_dssp GGCCEEEECCSSCCBCTTTCCBCC-----SSSSCEEEETTTCCEECGGGGGGSC
T ss_pred CCCCCccccCCCCCCCccccchhc-----eeCCCCCCCCCCcCccchhhhhhCC
Confidence 467776655555678999998651 1123468999999999999998764
No 170
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=64.16 E-value=4.2 Score=44.04 Aligned_cols=20 Identities=35% Similarity=0.348 Sum_probs=17.7
Q ss_pred cEEEEecccccEEEEEEECC
Q 005824 8 LGIGIDLGTTYSCVGVWQHN 27 (675)
Q Consensus 8 ~viGID~GTt~s~va~~~~g 27 (675)
.+||||+|||++++++++.+
T Consensus 27 ~~lgIDiGtts~k~~l~d~~ 46 (520)
T 4e1j_A 27 YILAIDQGTTSTRAIVFDGN 46 (520)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred eEEEEEeCCcceEEEEECCC
Confidence 89999999999999998543
No 171
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=63.96 E-value=4.7 Score=30.72 Aligned_cols=34 Identities=35% Similarity=0.719 Sum_probs=28.1
Q ss_pred cCccCCcccCCCCC-CcccccCCCceecccccccC
Q 005824 442 ILSECNGCKRPAFG-LMYRCELCNFNLHIPCMFID 475 (675)
Q Consensus 442 ~~~~C~~C~~~~~g-~~Y~C~~C~f~lH~~Ca~~~ 475 (675)
....|..|..+..+ .+-.|..|+--+|..|..++
T Consensus 17 ~~~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~ 51 (75)
T 2k16_A 17 QIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIM 51 (75)
T ss_dssp EEECBTTTTBCCSSCCEEECSSSSSEEEHHHHTCS
T ss_pred CCcCCCCCCCCCCCCCEEEcCCCCcccccccCCCC
Confidence 34569999988766 46889999999999998765
No 172
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=63.03 E-value=4.5 Score=44.39 Aligned_cols=19 Identities=26% Similarity=0.324 Sum_probs=17.6
Q ss_pred cEEEEecccccEEEEEEEC
Q 005824 8 LGIGIDLGTTYSCVGVWQH 26 (675)
Q Consensus 8 ~viGID~GTt~s~va~~~~ 26 (675)
.+||||+|||++++++++.
T Consensus 6 ~~lgIDiGTts~Ka~l~d~ 24 (572)
T 3jvp_A 6 YTIGVDYGTESGRAVLIDL 24 (572)
T ss_dssp EEEEEEECSSEEEEEEEET
T ss_pred EEEEEecCCcceEEEEEEC
Confidence 8999999999999999864
No 173
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=62.94 E-value=31 Score=40.00 Aligned_cols=57 Identities=9% Similarity=0.120 Sum_probs=38.5
Q ss_pred CHHHHHHHHHHHHHc-CC--ceeEeeChhHHHHHHhccccCCCCCceEEEEEeCCCcEEEEEEE
Q 005824 155 TDSQRQATKDAGAMA-GL--NVLKIISEPTAAAIAYGLHRKASSEKNVLIFDLGGGTFDVSLLT 215 (675)
Q Consensus 155 ~~~~r~~l~~a~~~A-gl--~~v~li~Ep~Aaa~~~~~~~~~~~~~~vlvvDiGggT~dvsv~~ 215 (675)
...-.+.|+++..+- ++ +++.++++..|++++-.... ....+-+=+|.|+=-..+.+
T Consensus 630 g~dv~~~L~~al~r~~~~~v~~val~NDtv~tlla~~y~~----~~~~iglIlGTG~na~y~e~ 689 (917)
T 1cza_N 630 GHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEE----PTCEVGLIVGTGSNACYMEE 689 (917)
T ss_dssp TSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTC----TTEEEEEEESSSEEEEEEEE
T ss_pred CCcHHHHHHHHHHhcCCCCceEEEEEEccHHHHHHhccCC----CCcEEEEEEeCCeeEEEEEc
Confidence 344567888888654 44 58999999999988866543 24566666777765444433
No 174
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=62.93 E-value=5.1 Score=41.22 Aligned_cols=20 Identities=25% Similarity=0.225 Sum_probs=17.5
Q ss_pred CcEEEEecccccEEEEEEEC
Q 005824 7 VLGIGIDLGTTYSCVGVWQH 26 (675)
Q Consensus 7 ~~viGID~GTt~s~va~~~~ 26 (675)
+.+||||+|.|++++++.+.
T Consensus 29 ~~~lgiDiGgt~i~~~l~d~ 48 (373)
T 2q2r_A 29 PLTFVGDVGGTSARMGFVRE 48 (373)
T ss_dssp CEEEEEEECSSEEEEEEEEE
T ss_pred CeEEEEEEccccEEEEEEec
Confidence 37899999999999998853
No 175
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=62.47 E-value=18 Score=27.22 Aligned_cols=47 Identities=21% Similarity=0.405 Sum_probs=36.4
Q ss_pred cccccccCCCCCceeecCC--CCc-ccccccCCCCcceeeCCeeeEecCCCCccccccccccc
Q 005824 510 KHCHACARPADGFVYHCEE--KGR-NLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCESKR 569 (675)
Q Consensus 510 ~~C~~C~~~~~g~~Y~C~~--C~f-~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~~~ 569 (675)
.+| .|++...|+.-.|.. |.. -+|..|+.|+... ...+.|..|....
T Consensus 17 ~~C-~C~~~~~g~MI~CD~~~C~~~wfH~~Cvgl~~~p------------~g~w~Cp~C~~~~ 66 (71)
T 1wen_A 17 TYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKP------------RGKWFCPRCSQES 66 (71)
T ss_dssp CCS-TTCCCSCSSEECCSCSSCSCCCEETTTTTCSSCC------------SSCCCCTTTSSCS
T ss_pred CEE-ECCCCCCCCEeEeeCCCCCCccEecccCCcCcCC------------CCCEECCCCCccc
Confidence 679 799977788889998 765 6999999986532 1358899998754
No 176
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=62.05 E-value=4.9 Score=43.76 Aligned_cols=27 Identities=22% Similarity=0.144 Sum_probs=18.5
Q ss_pred CCcCC-CCcEEEEecccccEEEEEEECC
Q 005824 1 MARKE-GVLGIGIDLGTTYSCVGVWQHN 27 (675)
Q Consensus 1 M~~~~-~~~viGID~GTt~s~va~~~~g 27 (675)
|+.+. ...++|||+|||.+++.+++..
T Consensus 3 ~~~~~~~~~~lgID~GTts~Ka~l~d~~ 30 (538)
T 4bc3_A 3 MAEHAPRRCCLGWDFSTQQVKVVAVDAE 30 (538)
T ss_dssp ------CCEEEEEEECSSEEEEEEEETT
T ss_pred cccCCCCCEEEEEEEcCcCEEEEEECCC
Confidence 44332 3489999999999999988643
No 177
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=61.98 E-value=6.3 Score=36.81 Aligned_cols=48 Identities=19% Similarity=0.342 Sum_probs=35.7
Q ss_pred cccccccCCCCCceeecCCCCcccccccCCCCcceeeCCeeeEecCCCCccccccccccc
Q 005824 510 KHCHACARPADGFVYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCESKR 569 (675)
Q Consensus 510 ~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~~~ 569 (675)
-.|..|++.+ -...|..|+.-.|..|..-|.. . .+.+.|.|..|....
T Consensus 8 ~~C~~C~~~g--~ll~Cd~C~~~~H~~Cl~p~l~----~------~p~~~W~C~~C~~~~ 55 (207)
T 3u5n_A 8 DWCAVCQNGG--DLLCCEKCPKVFHLTCHVPTLL----S------FPSGDWICTFCRDIG 55 (207)
T ss_dssp SSBTTTCCCE--EEEECSSSSCEECTTTSSSCCS----S------CCSSCCCCTTTSCSS
T ss_pred CCCCCCCCCC--ceEEcCCCCCccCCccCCCCCC----C------CCCCCEEeCceeCcc
Confidence 5699999754 4778999999999999864432 1 122568999998764
No 178
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=61.79 E-value=6.1 Score=30.48 Aligned_cols=50 Identities=22% Similarity=0.389 Sum_probs=38.2
Q ss_pred cccccccCCC--CCceeecCCCCcccccccCCCCcceeeCCeeeEecCCCCccccccccccc
Q 005824 510 KHCHACARPA--DGFVYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCESKR 569 (675)
Q Consensus 510 ~~C~~C~~~~--~g~~Y~C~~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~~~ 569 (675)
.+| .|+++- .++.-.|..|+-=.|..|+.++.... .....+.|..|....
T Consensus 13 ~~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~---------~~~~~~~C~~C~~~~ 64 (79)
T 1wep_A 13 VYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENA---------VDIDIYHCPDCEAVF 64 (79)
T ss_dssp CCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHH---------TTCSBBCCTTTTTTS
T ss_pred cEE-EcCCccCCCCceEEcCCCCCcEEeeecCcccccc---------cCCCeEECCCccccc
Confidence 668 899975 68899999999889999999875432 112457899998653
No 179
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=61.49 E-value=4.2 Score=43.68 Aligned_cols=22 Identities=23% Similarity=0.295 Sum_probs=18.0
Q ss_pred CCcCCCCcEEEEecccccEEEEEEE
Q 005824 1 MARKEGVLGIGIDLGTTYSCVGVWQ 25 (675)
Q Consensus 1 M~~~~~~~viGID~GTt~s~va~~~ 25 (675)
|.++ .++|||+|||++++++++
T Consensus 1 m~~~---~~lgiDiGtts~k~~l~d 22 (489)
T 2uyt_A 1 MTFR---NCVAVDLGASSGRVMLAR 22 (489)
T ss_dssp -CCE---EEEEEEECSSEEEEEEEE
T ss_pred CCcc---eEEEEEecCCCceEEEEE
Confidence 5544 789999999999999884
No 180
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=61.45 E-value=8.4 Score=28.74 Aligned_cols=46 Identities=20% Similarity=0.444 Sum_probs=35.5
Q ss_pred cccccccCCCC-CceeecCCCCcccccccCCCCcceeeCCeeeEecCCCCccccccccc
Q 005824 510 KHCHACARPAD-GFVYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCES 567 (675)
Q Consensus 510 ~~C~~C~~~~~-g~~Y~C~~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~ 567 (675)
.+| .|+++-. ++.-.|..|+-=.|..|+.++..- . + ..+.|..|..
T Consensus 20 ~~C-iC~~~~~~~~MIqCd~C~~WfH~~Cvgi~~~~-~---------~-~~~~C~~C~~ 66 (68)
T 3o70_A 20 VTC-FCMKPFAGRPMIECNECHTWIHLSCAKIRKSN-V---------P-EVFVCQKCRD 66 (68)
T ss_dssp CCS-TTCCCCTTCCEEECTTTCCEEETTTTTCCTTS-C---------C-SSCCCHHHHT
T ss_pred eEe-ECCCcCCCCCEEECCCCCccccccccCcCccc-C---------C-CcEECCCCCC
Confidence 679 9998754 478999999999999999998641 0 1 3477888865
No 181
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=61.35 E-value=4.8 Score=43.69 Aligned_cols=20 Identities=35% Similarity=0.385 Sum_probs=17.7
Q ss_pred cEEEEecccccEEEEEEECC
Q 005824 8 LGIGIDLGTTYSCVGVWQHN 27 (675)
Q Consensus 8 ~viGID~GTt~s~va~~~~g 27 (675)
+++|||+|||++++++++.+
T Consensus 5 YvlgID~GTss~Ka~l~d~~ 24 (526)
T 3ezw_A 5 YIVALDQGTTSSRAVVMDHD 24 (526)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred EEEEEEccccceeeeEEcCC
Confidence 99999999999999988533
No 182
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=61.09 E-value=3.6 Score=35.71 Aligned_cols=33 Identities=18% Similarity=0.359 Sum_probs=27.1
Q ss_pred cccccccccccccCCCCCCCCeEEeecCCCeeEeccchHHHHH
Q 005824 559 SQECIWCESKRLQGSASDNWGWSYVSKCNNYHCHAFCSTEMLL 601 (675)
Q Consensus 559 ~~~C~~C~~~~~~~~~~~~~~w~Y~c~~c~~~lH~~C~~~~~~ 601 (675)
...|.+|+.- +-.+.|..|...+|..|+...+.
T Consensus 63 ~d~C~vC~~G----------G~LlcCD~Cpr~Fh~~Cl~p~l~ 95 (142)
T 2lbm_A 63 DEQCRWCAEG----------GNLICCDFCHNAFCKKCILRNLG 95 (142)
T ss_dssp BCSCSSSCCC----------SSEEECSSSCCEEEHHHHHHHTC
T ss_pred CCeecccCCC----------CcEEeCCCCCCeeeHhhcCCCCC
Confidence 3579999883 46889999999999999986543
No 183
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=61.01 E-value=7.7 Score=28.40 Aligned_cols=51 Identities=24% Similarity=0.453 Sum_probs=39.1
Q ss_pred cccccccCCC--CCceeecCCCCcccccccCCCCcceeeCCeeeEecCCCCccccccccccc
Q 005824 510 KHCHACARPA--DGFVYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCESKR 569 (675)
Q Consensus 510 ~~C~~C~~~~--~g~~Y~C~~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~~~ 569 (675)
.+|..|+++- .++.-.|..|+-=.|..|+.++.... .....+.|..|..+.
T Consensus 7 ~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~---------~~~~~~~C~~C~~k~ 59 (64)
T 1we9_A 7 GQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARA---------EHIKQYKCPSCSNKS 59 (64)
T ss_dssp CCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGG---------GGCSSCCCHHHHTTT
T ss_pred CCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHh---------cCCCcEECCCCcCcC
Confidence 6799999875 57889999999999999999985421 111357899998754
No 184
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=60.65 E-value=4.2 Score=29.78 Aligned_cols=46 Identities=22% Similarity=0.413 Sum_probs=35.2
Q ss_pred cccccccCCCCCceeecCC--CC-cccccccCCCCcceeeCCeeeEecCCCCcccccccccc
Q 005824 510 KHCHACARPADGFVYHCEE--KG-RNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCESK 568 (675)
Q Consensus 510 ~~C~~C~~~~~g~~Y~C~~--C~-f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~~ 568 (675)
.+| .|++...|+.-.|.. |. --.|..|+.|+... ...+.|..|..+
T Consensus 12 ~yC-~C~~~~~g~MI~CD~c~C~~~WfH~~Cvgl~~~p------------~~~w~Cp~C~~~ 60 (62)
T 2g6q_A 12 TYC-LCNQVSYGEMIGCDNEQCPIEWFHFSCVSLTYKP------------KGKWYCPKCRGD 60 (62)
T ss_dssp EET-TTTEECCSEEEECSCTTCSSCEEETGGGTCSSCC------------SSCCCCHHHHTC
T ss_pred cEE-ECCCCCCCCeeeeeCCCCCcccEecccCCcCcCC------------CCCEECcCcccC
Confidence 678 899977788899998 44 57899999987531 145789888764
No 185
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=60.43 E-value=5 Score=35.35 Aligned_cols=21 Identities=29% Similarity=0.330 Sum_probs=18.1
Q ss_pred CcEEEEecccccEEEEEEECC
Q 005824 7 VLGIGIDLGTTYSCVGVWQHN 27 (675)
Q Consensus 7 ~~viGID~GTt~s~va~~~~g 27 (675)
|.++|||+|+..+++|+.+..
T Consensus 3 mriLGiDpG~~riGvAv~d~~ 23 (150)
T 1vhx_A 3 LRILGLDLGTKTLGVALSDEM 23 (150)
T ss_dssp EEEEEEEECSSEEEEEEECTT
T ss_pred CEEEEEEccCCEEEEEEEECC
Confidence 478999999999999998643
No 186
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=60.28 E-value=9.3 Score=33.92 Aligned_cols=19 Identities=32% Similarity=0.511 Sum_probs=17.0
Q ss_pred CcEEEEecccccEEEEEEE
Q 005824 7 VLGIGIDLGTTYSCVGVWQ 25 (675)
Q Consensus 7 ~~viGID~GTt~s~va~~~ 25 (675)
|.++|||-|++.+..++.+
T Consensus 1 m~ILGIDPGl~~tG~gvi~ 19 (158)
T 1hjr_A 1 AIILGIDPGSRVTGYGVIR 19 (158)
T ss_dssp CEEEEEECCSSEEEEEEEE
T ss_pred CEEEEEccCCCCeeEEEEE
Confidence 4799999999999999874
No 187
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=60.08 E-value=25 Score=36.80 Aligned_cols=52 Identities=17% Similarity=0.240 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHcC---CceeEeeChhHHHHHHhccccCCCCCceEEEEEeCCCcEEEEE
Q 005824 158 QRQATKDAGAMAG---LNVLKIISEPTAAAIAYGLHRKASSEKNVLIFDLGGGTFDVSL 213 (675)
Q Consensus 158 ~r~~l~~a~~~Ag---l~~v~li~Ep~Aaa~~~~~~~~~~~~~~vlvvDiGggT~dvsv 213 (675)
-.+.|++|.++-+ ++.+.++++..|+.++.....+ ...+-+=+|-||=-..+
T Consensus 162 v~~lL~~al~r~~~~~v~vvAivNDTvgTLla~~y~~~----~~~iglIlGTGtNa~y~ 216 (445)
T 3hm8_A 162 VVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYEDP----RCEIGLIVGTGTNACYM 216 (445)
T ss_dssp HHHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTTCT----TEEEEEEESSSEEEEEE
T ss_pred HHHHHHHHHHhcCCCCcceEEEecCcHHHHHhhccCCC----CceEEEEEeCCceEEEE
Confidence 4678888888764 4679999999999988655432 45555556777544333
No 188
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=59.65 E-value=29 Score=36.65 Aligned_cols=54 Identities=15% Similarity=0.199 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHcC---CceeEeeChhHHHHHHhccccCCCCCceEEEEEeCCCcEEEEEEE
Q 005824 157 SQRQATKDAGAMAG---LNVLKIISEPTAAAIAYGLHRKASSEKNVLIFDLGGGTFDVSLLT 215 (675)
Q Consensus 157 ~~r~~l~~a~~~Ag---l~~v~li~Ep~Aaa~~~~~~~~~~~~~~vlvvDiGggT~dvsv~~ 215 (675)
.-.+.|++|+++-| ++++.++++..|..++.....+ ...+=+=+|-||= .+.++
T Consensus 185 DVv~lL~~al~r~g~~~v~v~AlvNDTVgTL~s~aY~~~----~~~iGlI~GTGtN-a~Y~E 241 (470)
T 3f9m_A 185 NVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYEDH----QCEVGMIVGTGCN-ACYME 241 (470)
T ss_dssp BHHHHHHHHHHHHCSCCCEEEEEECHHHHHHHHHHTTCT----TEEEEEEESSSEE-EEEEE
T ss_pred cHHHHHHHHHHhcCCCCCcEEEEEEcCHHHHHhcccCCC----CceEEEEEecCCc-eEEee
Confidence 34788899998887 4678899999999887665432 3444444677754 44443
No 189
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=59.62 E-value=5.6 Score=42.93 Aligned_cols=20 Identities=20% Similarity=0.164 Sum_probs=17.7
Q ss_pred cEEEEecccccEEEEEEECC
Q 005824 8 LGIGIDLGTTYSCVGVWQHN 27 (675)
Q Consensus 8 ~viGID~GTt~s~va~~~~g 27 (675)
.++|||+|||++++++++.+
T Consensus 6 ~~lgIDiGtts~k~~l~d~~ 25 (511)
T 3hz6_A 6 YIATFDIGTTEVKAALADRD 25 (511)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred EEEEEEeCCCceEEEEECCC
Confidence 89999999999999998543
No 190
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=58.65 E-value=6.8 Score=27.19 Aligned_cols=46 Identities=20% Similarity=0.506 Sum_probs=33.3
Q ss_pred cccccCCC-CCceeecCCCCcccccccCCCCcceeeCCeeeEecCCCCccccccccc
Q 005824 512 CHACARPA-DGFVYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCES 567 (675)
Q Consensus 512 C~~C~~~~-~g~~Y~C~~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~ 567 (675)
|..|++.. .+..-.|..|+--.|..|...|.. . .+...+.|..|..
T Consensus 3 C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~l~----~------~P~g~W~C~~C~~ 49 (51)
T 1f62_A 3 CKVCRKKGEDDKLILCDECNKAFHLFCLRPALY----E------VPDGEWQCPACQP 49 (51)
T ss_dssp CTTTCCSSCCSCCEECTTTCCEECHHHHCTTCC----S------CCSSCCSCTTTSC
T ss_pred CCCCCCCCCCCCEEECCCCChhhCcccCCCCcC----C------CCCCcEECcCccc
Confidence 89998864 456778999999999999975422 1 1124578988865
No 191
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=57.70 E-value=14 Score=39.12 Aligned_cols=21 Identities=24% Similarity=0.431 Sum_probs=17.7
Q ss_pred CceEEEEEeCCCcEEEEEEEE
Q 005824 196 EKNVLIFDLGGGTFDVSLLTI 216 (675)
Q Consensus 196 ~~~vlvvDiGggT~dvsv~~~ 216 (675)
..+++|+|+|||+|.++...-
T Consensus 189 ~~t~gvlDlGGgStqi~~~~~ 209 (456)
T 3cj1_A 189 KGTLGAMDLGGASTQITFETT 209 (456)
T ss_dssp CCCCEEEEECSSEEEEEEECC
T ss_pred CCceEEEEcCCCceEEEeccC
Confidence 456899999999999988743
No 192
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=56.93 E-value=13 Score=27.85 Aligned_cols=55 Identities=29% Similarity=0.571 Sum_probs=37.4
Q ss_pred ccccccccccccccCCC-CCceeecCCCCcccccccCCCCcceeeCCeeeEecCCCCcccccccccc
Q 005824 503 RDCRDCNKHCHACARPA-DGFVYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCESK 568 (675)
Q Consensus 503 ~~~~~~~~~C~~C~~~~-~g~~Y~C~~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~~ 568 (675)
+.|..+ .|..|++.. .+....|..|+-..|..|..-|..- . +....+.|..|..+
T Consensus 14 w~C~~C--~C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~----~-----P~g~~W~C~~C~~~ 69 (70)
T 3asl_A 14 RLCRVC--ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSS----V-----PSEDEWYCPECRND 69 (70)
T ss_dssp SCCTTT--SBTTTCCCSCGGGEEECTTTCCEEEGGGSSSCCSS----C-----CSSSCCCCTTTSCC
T ss_pred eECCCC--CCcCCCCcCCCCCEEEcCCCCCceecccCCCCcCC----C-----CCCCCcCCcCccCc
Confidence 455554 688898753 5667889999999999999744321 1 11126889888753
No 193
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=56.72 E-value=4.6 Score=34.43 Aligned_cols=33 Identities=18% Similarity=0.431 Sum_probs=27.2
Q ss_pred CcccccccccccccCCCCCCCCeEEeecCCCeeEeccchHHHH
Q 005824 558 LSQECIWCESKRLQGSASDNWGWSYVSKCNNYHCHAFCSTEML 600 (675)
Q Consensus 558 ~~~~C~~C~~~~~~~~~~~~~~w~Y~c~~c~~~lH~~C~~~~~ 600 (675)
....|.+|+.- +-.+.|+.|...+|..|+...+
T Consensus 56 ~~~~C~vC~dG----------G~LlcCd~Cpr~Fc~~Cl~~~l 88 (129)
T 3ql9_A 56 MDEQCRWCAEG----------GNLICCDFCHNAFCKKCILRNL 88 (129)
T ss_dssp CBSSCTTTCCC----------SEEEECSSSSCEEEHHHHHHHT
T ss_pred CCCcCeecCCC----------CeeEecCCCchhhhHHHhCCCc
Confidence 34579999873 5688999999999999999764
No 194
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=56.12 E-value=4.6 Score=30.77 Aligned_cols=50 Identities=24% Similarity=0.473 Sum_probs=38.4
Q ss_pred cccccccCCCCC-ceeecCCCCcccccccCCCCcceeeCCeeeEecCCCCccccccccccc
Q 005824 510 KHCHACARPADG-FVYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCESKR 569 (675)
Q Consensus 510 ~~C~~C~~~~~g-~~Y~C~~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~~~ 569 (675)
.+|..|++...+ +.-.|..|+--.|..|+.++.... ....+.|..|..+.
T Consensus 19 ~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~~~~~----------~~~~w~C~~C~~~~ 69 (75)
T 2k16_A 19 WICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAAPP----------EEMQWFCPKCANKI 69 (75)
T ss_dssp ECBTTTTBCCSSCCEEECSSSSSEEEHHHHTCSSCCC----------SSSCCCCTTTHHHH
T ss_pred cCCCCCCCCCCCCCEEEcCCCCcccccccCCCCccCC----------CCCCEEChhccCch
Confidence 679999997655 678899999999999999876421 12457899997653
No 195
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=55.10 E-value=24 Score=36.20 Aligned_cols=48 Identities=21% Similarity=0.190 Sum_probs=33.1
Q ss_pred CccEEEEecCCcChHH-HHHHHHHhcCCC---cccccCCchhhHHhHHHHHH
Q 005824 334 RVDDVVIVGGSARIPK-VQQLLQEFFNGK---RLCQNINPDEAVAYGAAVQA 381 (675)
Q Consensus 334 ~i~~VvLvGG~s~~p~-l~~~l~~~~~~~---~v~~~~~p~~ava~Gaa~~a 381 (675)
+++.|+|.||.+.... +.+.|++.+... .+........+.+.||+..+
T Consensus 295 ~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~ 346 (381)
T 1saz_A 295 EVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVL 346 (381)
T ss_dssp CCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHH
Confidence 5689999999886543 777777777322 33333334468999999876
No 196
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=54.77 E-value=12 Score=32.45 Aligned_cols=21 Identities=29% Similarity=0.194 Sum_probs=18.5
Q ss_pred cEEEEecccccEEEEEEECCe
Q 005824 8 LGIGIDLGTTYSCVGVWQHNR 28 (675)
Q Consensus 8 ~viGID~GTt~s~va~~~~g~ 28 (675)
.++|||+|+..+++|+.++..
T Consensus 4 ~iLglD~G~kriGvAvsd~~~ 24 (138)
T 1nu0_A 4 TLMAFDFGTKSIGVAVGQRIT 24 (138)
T ss_dssp EEEEEECCSSEEEEEEEETTT
T ss_pred eEEEEEeCCCEEEEEEEcCCC
Confidence 689999999999999987653
No 197
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=54.48 E-value=5.6 Score=28.85 Aligned_cols=46 Identities=22% Similarity=0.436 Sum_probs=34.0
Q ss_pred cccccccCCCCCceeecCC--CC-cccccccCCCCcceeeCCeeeEecCCCCcccccccccc
Q 005824 510 KHCHACARPADGFVYHCEE--KG-RNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCESK 568 (675)
Q Consensus 510 ~~C~~C~~~~~g~~Y~C~~--C~-f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~~ 568 (675)
.+| .|++...|..-.|.. |. --.|..|+.|+... ...+.|..|..+
T Consensus 11 ~~C-~C~~~~~g~mi~CD~cdC~~~wfH~~Cvgl~~~p------------~g~w~C~~C~~~ 59 (60)
T 2vnf_A 11 TYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKP------------RGKWFCPRCSQE 59 (60)
T ss_dssp EET-TTTEECCSEEEECSCTTCSSCEEETGGGTCSSCC------------SSCCCCHHHHC-
T ss_pred CEE-ECCCcCCCCEEEeCCCCCCCceEehhcCCCCcCC------------CCCEECcCccCc
Confidence 668 899977788899998 55 35999999987532 134778888653
No 198
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=54.00 E-value=5.6 Score=28.75 Aligned_cols=46 Identities=22% Similarity=0.393 Sum_probs=35.2
Q ss_pred cccccccCCCCCceeecCC--CCc-ccccccCCCCcceeeCCeeeEecCCCCcccccccccc
Q 005824 510 KHCHACARPADGFVYHCEE--KGR-NLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCESK 568 (675)
Q Consensus 510 ~~C~~C~~~~~g~~Y~C~~--C~f-~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~~ 568 (675)
.+| .|++...|..-.|.. |.. -.|..|+.|+.... ..+.|..|.++
T Consensus 10 ~yC-~C~~~~~g~mi~CD~~~C~~~wfH~~Cvgl~~~p~------------~~w~Cp~C~~~ 58 (59)
T 3c6w_A 10 TYC-LCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPK------------GKWFCPRCVQE 58 (59)
T ss_dssp EET-TTTEECCSEEEECSCTTCSSCEEETGGGTCSSCCS------------SCCCCHHHHCC
T ss_pred cEE-ECCCCCCCCeeEeeCCCCCCCCEecccCCcccCCC------------CCEECcCccCc
Confidence 678 899977788899998 765 79999999875421 34778888653
No 199
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=53.07 E-value=10 Score=34.73 Aligned_cols=47 Identities=17% Similarity=0.322 Sum_probs=34.0
Q ss_pred cccccccCCCCCceeecCCCCcccccccCCCCcceeeCCeeeEecCCCCcccccccccc
Q 005824 510 KHCHACARPADGFVYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCESK 568 (675)
Q Consensus 510 ~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~~ 568 (675)
..|..|++.+ -...|..|+-..|..|..-|..- .+.+.|.|..|...
T Consensus 3 ~~C~~C~~~g--~ll~Cd~C~~~~H~~Cl~p~l~~----------~p~g~W~C~~C~~~ 49 (189)
T 2ro1_A 3 TICRVCQKPG--DLVMCNQCEFCFHLDCHLPALQD----------VPGEEWSCSLCHVL 49 (189)
T ss_dssp CCBTTTCCCS--SCCCCTTTCCBCCSTTSTTCCSS----------CCCTTCCTTTTSCS
T ss_pred CcCccCCCCC--ceeECCCCCchhccccCCCCccc----------CCCCCCCCcCccCC
Confidence 4599999764 36679999999999998644321 11245889999865
No 200
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=51.51 E-value=11 Score=27.95 Aligned_cols=30 Identities=27% Similarity=0.639 Sum_probs=24.2
Q ss_pred ccCCcccCCCCCCcccccCCCceecccccccC
Q 005824 444 SECNGCKRPAFGLMYRCELCNFNLHIPCMFID 475 (675)
Q Consensus 444 ~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~~~ 475 (675)
..|..|+.. +....|..|+-.+|..|...|
T Consensus 13 ~~C~vC~~~--~~ll~Cd~C~~~~H~~Cl~P~ 42 (66)
T 2lri_C 13 ARCGVCGDG--TDVLRCTHCAAAFHWRCHFPA 42 (66)
T ss_dssp CCCTTTSCC--TTCEECSSSCCEECHHHHCTT
T ss_pred CCcCCCCCC--CeEEECCCCCCceecccCCCc
Confidence 459999864 457889999999999997643
No 201
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=51.46 E-value=13 Score=33.21 Aligned_cols=19 Identities=37% Similarity=0.413 Sum_probs=17.0
Q ss_pred CcEEEEecccccEEEEEEE
Q 005824 7 VLGIGIDLGTTYSCVGVWQ 25 (675)
Q Consensus 7 ~~viGID~GTt~s~va~~~ 25 (675)
|.++|||.|++.+..++.+
T Consensus 1 MrILGIDPGl~~tG~gvi~ 19 (166)
T 4ep4_A 1 MVVAGIDPGITHLGLGVVA 19 (166)
T ss_dssp CEEEEEECCSSEEEEEEEE
T ss_pred CEEEEEccccCceEEEEEE
Confidence 5799999999999999874
No 202
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=50.46 E-value=7.7 Score=41.49 Aligned_cols=20 Identities=45% Similarity=0.679 Sum_probs=16.8
Q ss_pred cEEEEecccccEEEEEEECC
Q 005824 8 LGIGIDLGTTYSCVGVWQHN 27 (675)
Q Consensus 8 ~viGID~GTt~s~va~~~~g 27 (675)
.++|||+|||++++++++.+
T Consensus 7 ~~lgIDiGTts~Ka~l~d~~ 26 (482)
T 3h6e_A 7 ATIVIDLGKTLSKVSLWDLD 26 (482)
T ss_dssp -CEEEEECSSEEEEEEECTT
T ss_pred eEEEEEcCCCCeEEEEEECC
Confidence 78999999999999988533
No 203
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=50.13 E-value=9.8 Score=40.90 Aligned_cols=20 Identities=30% Similarity=0.321 Sum_probs=17.8
Q ss_pred cEEEEecccccEEEEEEECC
Q 005824 8 LGIGIDLGTTYSCVGVWQHN 27 (675)
Q Consensus 8 ~viGID~GTt~s~va~~~~g 27 (675)
.+||||+|||++++++++.+
T Consensus 7 ~~lgIDiGtts~k~~l~d~~ 26 (501)
T 3g25_A 7 YILSIDQGTTSSRAILFNQK 26 (501)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred EEEEEEeCccceEEEEEcCC
Confidence 89999999999999998543
No 204
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=50.07 E-value=16 Score=34.37 Aligned_cols=54 Identities=31% Similarity=0.605 Sum_probs=33.5
Q ss_pred ccccccccccccccCCC-CCceeecCCCCcccccccCCCCcceeeCCeeeEecCCCCccccccccc
Q 005824 503 RDCRDCNKHCHACARPA-DGFVYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCES 567 (675)
Q Consensus 503 ~~~~~~~~~C~~C~~~~-~g~~Y~C~~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~ 567 (675)
+.|..+ .|..|++.. .+..-.|..|+--.|..|..-|.. .. +....+.|..|..
T Consensus 170 w~C~~c--~C~vC~~~~~~~~lL~CD~C~~~yH~~CL~PPL~----~v-----P~G~~W~Cp~C~~ 224 (226)
T 3ask_A 170 RLCRVC--ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLS----SV-----PSEDEWYCPECRN 224 (226)
T ss_dssp SCCTTT--SCSSSCCCCC--CCEECSSSCCEECSCC--CCCC----SC-----CSSSCCCCGGGC-
T ss_pred EecCCC--CCcCCCCCCCCCCeEEcCCCCcceeCccCCCCcc----cC-----CCCCCCCCcCCcC
Confidence 444443 699999853 456778999999999999975532 11 1112688999965
No 205
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=49.75 E-value=13 Score=26.84 Aligned_cols=48 Identities=23% Similarity=0.520 Sum_probs=34.8
Q ss_pred ccccccccCCCCCceeecCCCCcccccccCCCCcceeeCCeeeEecCCCCcccccccccc
Q 005824 509 NKHCHACARPADGFVYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCESK 568 (675)
Q Consensus 509 ~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~~ 568 (675)
...|..|++. |..-.|..|+--.|..|...|..- .+...+.|..|...
T Consensus 5 ~~~C~vC~~~--g~ll~Cd~C~~~fH~~Cl~ppl~~----------~p~g~W~C~~C~~~ 52 (60)
T 2puy_A 5 EDFCSVCRKS--GQLLMCDTCSRVYHLDCLDPPLKT----------IPKGMWICPRCQDQ 52 (60)
T ss_dssp CSSCTTTCCC--SSCEECSSSSCEECGGGSSSCCSS----------CCCSCCCCHHHHHH
T ss_pred CCCCcCCCCC--CcEEEcCCCCcCEECCcCCCCcCC----------CCCCceEChhccCh
Confidence 3569999985 467789999999999999855321 11245789888653
No 206
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=49.62 E-value=5.6 Score=31.47 Aligned_cols=48 Identities=21% Similarity=0.526 Sum_probs=36.5
Q ss_pred cccccccCCC---CCceeecCCCCcccccccCCCCcceeeCCeeeEecCCCCccccccccccc
Q 005824 510 KHCHACARPA---DGFVYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCESKR 569 (675)
Q Consensus 510 ~~C~~C~~~~---~g~~Y~C~~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~~~ 569 (675)
..|..|+... .+....|..|+.-+|..|..+|. + +...|.|..|....
T Consensus 26 ~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~-v-----------P~g~W~C~~C~~~~ 76 (88)
T 2l43_A 26 AVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY-I-----------PEGQWLCRHCLQSR 76 (88)
T ss_dssp CCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSS-C-----------CSSCCCCHHHHHHT
T ss_pred CcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCc-c-----------CCCceECccccCcc
Confidence 6699999753 33577799999999999998873 1 12468899997654
No 207
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=49.45 E-value=10 Score=41.62 Aligned_cols=32 Identities=22% Similarity=0.299 Sum_probs=25.8
Q ss_pred cEEEEecccccEEEEEEECCeEEEEecCCCCcccceEEEEe
Q 005824 8 LGIGIDLGTTYSCVGVWQHNRVEIIANDQGNRTTPSYVAFT 48 (675)
Q Consensus 8 ~viGID~GTt~s~va~~~~g~~~~l~~~~g~~~~PS~v~~~ 48 (675)
.+|-|.-|+.+.+|+.+.+-.|.++ |.+||..
T Consensus 41 ~~IVIHpGS~~lRIG~AsD~~P~~i---------p~~iA~~ 72 (655)
T 4am6_A 41 ATIVIHPGSNSIKIGFPKDDHPVVV---------PNCVAVP 72 (655)
T ss_dssp GEEEEECCSSEEEEECTTSSSCEEE---------ESCEEEE
T ss_pred CeEEEcCCCcceeeeecCCCCCccc---------ceeEEec
Confidence 7899999999999999877777666 6666654
No 208
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=49.32 E-value=15 Score=26.63 Aligned_cols=33 Identities=24% Similarity=0.591 Sum_probs=26.4
Q ss_pred ccCccCCcccCCCCCCcccccCCCceecccccccC
Q 005824 441 KILSECNGCKRPAFGLMYRCELCNFNLHIPCMFID 475 (675)
Q Consensus 441 ~~~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~~~ 475 (675)
.....|..|+.. +..-.|..|+-.+|..|...|
T Consensus 9 ~~~~~C~vC~~~--g~ll~CD~C~~~fH~~Cl~p~ 41 (61)
T 2l5u_A 9 DHQDYCEVCQQG--GEIILCDTCPRAYHMVCLDPD 41 (61)
T ss_dssp CCCSSCTTTSCC--SSEEECSSSSCEEEHHHHCTT
T ss_pred CCCCCCccCCCC--CcEEECCCCChhhhhhccCCC
Confidence 345569999874 567889999999999998654
No 209
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=49.03 E-value=24 Score=27.74 Aligned_cols=31 Identities=29% Similarity=0.858 Sum_probs=24.9
Q ss_pred CccCCcccCCCCCCcccccCCCceecccccccC
Q 005824 443 LSECNGCKRPAFGLMYRCELCNFNLHIPCMFID 475 (675)
Q Consensus 443 ~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~~~ 475 (675)
...|..|+.. |..-.|..|+-.+|..|...|
T Consensus 25 ~~~C~vC~~~--g~LL~CD~C~~~fH~~Cl~Pp 55 (88)
T 1fp0_A 25 ATICRVCQKP--GDLVMCNQCEFCFHLDCHLPA 55 (88)
T ss_dssp SSCCSSSCSS--SCCEECTTSSCEECTTSSSTT
T ss_pred CCcCcCcCCC--CCEEECCCCCCceecccCCCC
Confidence 4459999875 467889999999999997543
No 210
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=48.58 E-value=9.8 Score=40.43 Aligned_cols=46 Identities=15% Similarity=0.171 Sum_probs=30.6
Q ss_pred eeeEecCCCCcccccccccccccCCCCCCCCeEEeecCCCeeEeccchHHH
Q 005824 549 VEFVLSDKELSQECIWCESKRLQGSASDNWGWSYVSKCNNYHCHAFCSTEM 599 (675)
Q Consensus 549 h~~~l~~~~~~~~C~~C~~~~~~~~~~~~~~w~Y~c~~c~~~lH~~C~~~~ 599 (675)
|.|....-..+.+|+.|++.. .| ...--|+|..|++..|.+|...+
T Consensus 210 h~f~~~~~~~pt~C~~C~~~l-~g----~~~qg~~C~~C~~~~Hk~C~~~v 255 (463)
T 3cxl_A 210 HNFKVHTFRGPHWCEYCANFM-WG----LIAQGVKCADCGLNVHKQCSKMV 255 (463)
T ss_dssp CCEEEECCSSCCBCTTTCCBC-CS----SSCCEEEETTTCCEECHHHHTTS
T ss_pred cceEEeecCCCCcchhhhhhh-hh----HHhcCeeccccCccccccccccc
Confidence 444443333456899998864 11 11226899999999999998654
No 211
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=48.35 E-value=10 Score=40.87 Aligned_cols=20 Identities=35% Similarity=0.385 Sum_probs=17.7
Q ss_pred cEEEEecccccEEEEEEECC
Q 005824 8 LGIGIDLGTTYSCVGVWQHN 27 (675)
Q Consensus 8 ~viGID~GTt~s~va~~~~g 27 (675)
.++|||+|||++++++++.+
T Consensus 4 ~~lgIDiGtts~k~~l~d~~ 23 (510)
T 2p3r_A 4 YIVALDQGTTSSRAVVMDHD 23 (510)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred EEEEEEcCCcceEEEEECCC
Confidence 89999999999999998543
No 212
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=47.41 E-value=10 Score=40.61 Aligned_cols=19 Identities=21% Similarity=0.335 Sum_probs=17.3
Q ss_pred cEEEEecccccEEEEEEEC
Q 005824 8 LGIGIDLGTTYSCVGVWQH 26 (675)
Q Consensus 8 ~viGID~GTt~s~va~~~~ 26 (675)
.++|||+|||++++++++.
T Consensus 4 ~~lgiDiGtt~~k~~l~d~ 22 (497)
T 2zf5_O 4 FVLSLDEGTTSARAIIFDR 22 (497)
T ss_dssp EEEEEEECSSEEEEEEECT
T ss_pred EEEEEecCCchhEEEEECC
Confidence 7899999999999999854
No 213
>2jtn_A LIM domain-binding protein 1, LIM/homeobox protein LHX3; intramolecular (fusion) protein-protein complex, protein binding/transcription complex; NMR {Mus musculus}
Probab=47.03 E-value=16 Score=33.19 Aligned_cols=30 Identities=17% Similarity=0.454 Sum_probs=18.6
Q ss_pred CccCCcccCCCCCCcccccCCCceecccccc
Q 005824 443 LSECNGCKRPAFGLMYRCELCNFNLHIPCMF 473 (675)
Q Consensus 443 ~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~ 473 (675)
...|.+|++++.+.. .-..-+-..|..|..
T Consensus 60 ~~~C~~C~~~I~~~~-~~~a~~~~wH~~CF~ 89 (182)
T 2jtn_A 60 IPMCAGCDQHILDRF-ILKALDRHWHSKCLK 89 (182)
T ss_dssp CCBCBTSSSBCCCSE-EEEETTEEECSSTTS
T ss_pred CCcCccCCCCccCce-eEEecCCeEccccCc
Confidence 456999999887642 222335566666643
No 214
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=46.87 E-value=16 Score=26.78 Aligned_cols=51 Identities=20% Similarity=0.377 Sum_probs=36.8
Q ss_pred cccccccCCC---CCceeecCCCCcccccccCCCCccee-eCCeeeEecCCCCcccccccccc
Q 005824 510 KHCHACARPA---DGFVYHCEEKGRNLHPCCFNLPRKLA-IGSVEFVLSDKELSQECIWCESK 568 (675)
Q Consensus 510 ~~C~~C~~~~---~g~~Y~C~~C~f~lH~~Ca~lp~~i~-~~~h~~~l~~~~~~~~C~~C~~~ 568 (675)
..|..|+... .+....|..|+-..|..|...|..-. + .+...|.|..|...
T Consensus 7 ~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~--------~p~~~W~C~~C~~~ 61 (66)
T 2yt5_A 7 GVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVI--------DSDEKWLCRQCVFA 61 (66)
T ss_dssp CCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHH--------HSSCCCCCHHHHHT
T ss_pred CCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCccccccc--------CCCCCEECCCCcCc
Confidence 5699999852 36788899999999999997763211 1 12245889988764
No 215
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=46.28 E-value=6.1 Score=30.49 Aligned_cols=58 Identities=17% Similarity=0.386 Sum_probs=41.9
Q ss_pred cccccccCCCCCceeecCCCCcccccccCCCCcceeeC-CeeeEec-CCCCccccccccc
Q 005824 510 KHCHACARPADGFVYHCEEKGRNLHPCCFNLPRKLAIG-SVEFVLS-DKELSQECIWCES 567 (675)
Q Consensus 510 ~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~lp~~i~~~-~h~~~l~-~~~~~~~C~~C~~ 567 (675)
..|..|..-..+-.|.|..|+-..|..|..-+.....+ -+...+. .....|.|.-|..
T Consensus 16 ~~C~VC~~~t~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~Cen 75 (89)
T 1wil_A 16 EMCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDN 75 (89)
T ss_dssp CCCTTTCCCCSSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCC
T ss_pred cccCccccccccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccch
Confidence 56999998778889999999999999999766555443 2233232 3345678988864
No 216
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=45.95 E-value=17 Score=27.06 Aligned_cols=34 Identities=32% Similarity=0.686 Sum_probs=27.7
Q ss_pred ccCccCCcccCCCCC-CcccccCCCceecccccccC
Q 005824 441 KILSECNGCKRPAFG-LMYRCELCNFNLHIPCMFID 475 (675)
Q Consensus 441 ~~~~~C~~C~~~~~g-~~Y~C~~C~f~lH~~Ca~~~ 475 (675)
....+| .|+.+..+ .+-.|+.|+-=+|..|..++
T Consensus 17 ~~~~~C-iC~~~~~~~~MIqCd~C~~WfH~~Cvgi~ 51 (68)
T 3o70_A 17 QGLVTC-FCMKPFAGRPMIECNECHTWIHLSCAKIR 51 (68)
T ss_dssp TTCCCS-TTCCCCTTCCEEECTTTCCEEETTTTTCC
T ss_pred CCceEe-ECCCcCCCCCEEECCCCCccccccccCcC
Confidence 345668 99988766 46899999999999998765
No 217
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=45.27 E-value=11 Score=40.46 Aligned_cols=20 Identities=20% Similarity=0.200 Sum_probs=17.7
Q ss_pred cEEEEecccccEEEEEEECC
Q 005824 8 LGIGIDLGTTYSCVGVWQHN 27 (675)
Q Consensus 8 ~viGID~GTt~s~va~~~~g 27 (675)
.++|||+|||++++++++.+
T Consensus 5 ~~lgIDiGtT~~k~~l~d~~ 24 (503)
T 2w40_A 5 VILSIDQSTQSTKVFFYDEE 24 (503)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred EEEEEEeCCcceEEEEECCC
Confidence 78999999999999998644
No 218
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=44.20 E-value=19 Score=26.18 Aligned_cols=35 Identities=23% Similarity=0.540 Sum_probs=28.4
Q ss_pred ccCccCCcccCCC--CCCcccccCCCceecccccccC
Q 005824 441 KILSECNGCKRPA--FGLMYRCELCNFNLHIPCMFID 475 (675)
Q Consensus 441 ~~~~~C~~C~~~~--~g~~Y~C~~C~f~lH~~Ca~~~ 475 (675)
+...+|..|..+. .+.+-.|+.|+-=+|..|+.++
T Consensus 4 ~e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~ 40 (64)
T 1we9_A 4 GSSGQCGACGESYAADEFWICCDLCEMWFHGKCVKIT 40 (64)
T ss_dssp SSCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCC
T ss_pred CCCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcC
Confidence 3456799999885 4566899999999999998775
No 219
>2rgt_A Fusion of LIM/homeobox protein LHX3, linker, INSU enhancer protein ISL-1; protein-protein complex, LIM domain, Zn finger, activator, D binding; 2.05A {Mus musculus} PDB: 3mmk_A
Probab=43.80 E-value=20 Score=32.07 Aligned_cols=29 Identities=17% Similarity=0.438 Sum_probs=18.2
Q ss_pred ccCCcccCCCCCCcccccCCCceecccccc
Q 005824 444 SECNGCKRPAFGLMYRCELCNFNLHIPCMF 473 (675)
Q Consensus 444 ~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~ 473 (675)
..|.+|++++.+.. .-..-+-..|..|..
T Consensus 7 ~~C~~C~~~I~~~~-~~~a~~~~wH~~CF~ 35 (169)
T 2rgt_A 7 PMCAGCDQHILDRF-ILKALDRHWHSKCLK 35 (169)
T ss_dssp CBBSSSSSBCCSSS-CEECSSCEECTTTSB
T ss_pred CccccCCCccCCcE-EEEECCcEEccccCc
Confidence 46999999887642 222345667776653
No 220
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=43.73 E-value=12 Score=40.26 Aligned_cols=20 Identities=25% Similarity=0.277 Sum_probs=17.5
Q ss_pred cEEEEecccccEEEEEEECC
Q 005824 8 LGIGIDLGTTYSCVGVWQHN 27 (675)
Q Consensus 8 ~viGID~GTt~s~va~~~~g 27 (675)
.++|||+|||++++++++.+
T Consensus 3 ~~lgiDiGtT~~k~~l~d~~ 22 (495)
T 2dpn_A 3 FLLALDQGTTSSRAILFTLE 22 (495)
T ss_dssp CEEEEEECSSEEEEEEECTT
T ss_pred EEEEEeeCCcceEEEEECCC
Confidence 68999999999999998543
No 221
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.44 E-value=22 Score=27.14 Aligned_cols=54 Identities=26% Similarity=0.615 Sum_probs=35.7
Q ss_pred ccccccccccccccCC-CCCceeecCCCCcccccccCCCCcceeeCCeeeEecCCCCccccccccc
Q 005824 503 RDCRDCNKHCHACARP-ADGFVYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCES 567 (675)
Q Consensus 503 ~~~~~~~~~C~~C~~~-~~g~~Y~C~~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~ 567 (675)
+.|..+ .|..|++. -.+....|..|+-..|..|..-|..- . +....+.|..|..
T Consensus 22 w~C~~c--~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~----~-----P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 22 KKCHSC--SCRVCGGKHEPNMQLLCDECNVAYHIYCLNPPLDK----V-----PEEEYWYCPSCKT 76 (77)
T ss_dssp SCCSSS--SCSSSCCCCCSTTEEECSSSCCEEETTSSSSCCSS----C-----CCSSCCCCTTTCC
T ss_pred eECCCC--CCcCcCCcCCCCCEEEcCCCCccccccccCCCccC----C-----CCCCCcCCcCccC
Confidence 444443 68999975 35567789999999999999754221 1 1112578888854
No 222
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=43.23 E-value=30 Score=36.35 Aligned_cols=44 Identities=23% Similarity=0.323 Sum_probs=26.7
Q ss_pred ceeEeeChhHHHHHHh-----ccccCC-CCCceEEEEEeCCCcEEEEEEE
Q 005824 172 NVLKIISEPTAAAIAY-----GLHRKA-SSEKNVLIFDLGGGTFDVSLLT 215 (675)
Q Consensus 172 ~~v~li~Ep~Aaa~~~-----~~~~~~-~~~~~vlvvDiGggT~dvsv~~ 215 (675)
..+++|+-.+=+.+++ .+..-. +...++.++|+|||+|.++...
T Consensus 150 ~~v~iisG~eEg~y~wi~vnyllg~l~~~~~~t~g~lDlGGgStQi~f~~ 199 (452)
T 3zx3_A 150 QGAKIITGQEEGAYGWITINYLLGRFKTPGGSTFGALDLGGASTQITFVP 199 (452)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHTTTTC---CCCCEEEEECSSEEEEEECC
T ss_pred CceEECCchhhhhhhHHHHHhhhccccCCCCCceEEEecCCCceEEEecc
Confidence 4577887555443332 222211 1235788999999999998654
No 223
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.63 E-value=34 Score=24.12 Aligned_cols=31 Identities=23% Similarity=0.654 Sum_probs=25.1
Q ss_pred CccCCcccCCCCCCcccccCCCceecccccccC
Q 005824 443 LSECNGCKRPAFGLMYRCELCNFNLHIPCMFID 475 (675)
Q Consensus 443 ~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~~~ 475 (675)
...|..|+.. +..-.|..|+-.+|..|...|
T Consensus 9 ~~~C~vC~~~--g~ll~Cd~C~~~~H~~Cl~pp 39 (56)
T 2yql_A 9 EDFCSVCRKS--GQLLMCDTCSRVYHLDCLDPP 39 (56)
T ss_dssp CCSCSSSCCS--SCCEECSSSSCEECSSSSSSC
T ss_pred CCCCccCCCC--CeEEEcCCCCcceECccCCCC
Confidence 4459999875 567889999999999998643
No 224
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=42.14 E-value=18 Score=28.40 Aligned_cols=53 Identities=19% Similarity=0.354 Sum_probs=36.0
Q ss_pred cccccccCCC---CCceeecCCCCcccccccCCCCcceeeCCeeeEecCCCCcccccccccc
Q 005824 510 KHCHACARPA---DGFVYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCESK 568 (675)
Q Consensus 510 ~~C~~C~~~~---~g~~Y~C~~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~~ 568 (675)
..|.+|++.. .+....|..|+.-.|..|..-|..-.. ...+...|.|..|...
T Consensus 17 ~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~------~~~p~g~W~C~~C~~~ 72 (88)
T 1wev_A 17 LACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKE------VNDPRLVWYCARCTRQ 72 (88)
T ss_dssp CSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHH------HHCTTCCCCCHHHHHH
T ss_pred CcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccc------cCCCCCCeeCccccch
Confidence 5699999864 356778999999999999876533100 0012245788888653
No 225
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=41.90 E-value=6.7 Score=28.31 Aligned_cols=29 Identities=24% Similarity=0.659 Sum_probs=23.1
Q ss_pred ccCCcccCCCCCC-cccccCCCceeccccc
Q 005824 444 SECNGCKRPAFGL-MYRCELCNFNLHIPCM 472 (675)
Q Consensus 444 ~~C~~C~~~~~g~-~Y~C~~C~f~lH~~Ca 472 (675)
..|-+|..+.... .|+|..|..++...|-
T Consensus 16 ~~C~~C~~~~~~~~~y~C~~C~~~FC~dCD 45 (59)
T 1z60_A 16 RFCYGCQGELKDQHVYVCAVCQNVFCVDCD 45 (59)
T ss_dssp CEETTTTEECTTSEEECCTTTTCCBCHHHH
T ss_pred CcccccCcccCCCccEECCccCcCcccchh
Confidence 3499998887543 4999999999888883
No 226
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.18 E-value=15 Score=27.95 Aligned_cols=31 Identities=29% Similarity=0.738 Sum_probs=25.2
Q ss_pred cCccCCcccCCCCCCcccccCCCceecccccc
Q 005824 442 ILSECNGCKRPAFGLMYRCELCNFNLHIPCMF 473 (675)
Q Consensus 442 ~~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~ 473 (675)
....|..|++.+. .-.+|..|+-.+|..|..
T Consensus 14 ~i~~C~IC~~~i~-~g~~C~~C~h~fH~~Ci~ 44 (74)
T 2ct0_A 14 AVKICNICHSLLI-QGQSCETCGIRMHLPCVA 44 (74)
T ss_dssp SSCBCSSSCCBCS-SSEECSSSCCEECHHHHH
T ss_pred CCCcCcchhhHcc-cCCccCCCCchhhHHHHH
Confidence 4456999998875 347899999999999974
No 227
>3ny3_A E3 ubiquitin-protein ligase UBR2; zinc finger-like, ubiquitin ligase, protein binding, lygase,; 1.60A {Homo sapiens} PDB: 3ny2_A 3ny1_A
Probab=41.09 E-value=8.4 Score=29.36 Aligned_cols=53 Identities=15% Similarity=0.303 Sum_probs=29.7
Q ss_pred cccCC--CCCceeecCCCCcccccccCCCC---cceeeCCeeeEecCCCCccccccccccc
Q 005824 514 ACARP--ADGFVYHCEEKGRNLHPCCFNLP---RKLAIGSVEFVLSDKELSQECIWCESKR 569 (675)
Q Consensus 514 ~C~~~--~~g~~Y~C~~C~f~lH~~Ca~lp---~~i~~~~h~~~l~~~~~~~~C~~C~~~~ 569 (675)
+|++. ....+|+|..|.++ +.|+.=. ..=.|.+|.+..........|+ |+...
T Consensus 6 ~Cg~vf~~ge~~Y~C~~C~~d--~tc~lC~~CF~~~~H~gH~~~~~~s~~gG~CD-CGD~e 63 (75)
T 3ny3_A 6 LCGRVFKVGEPTYSCRDCAVD--PTCVLCMECFLGSIHRDHRYRMTTSGGGGFCD-CGDTE 63 (75)
T ss_dssp CCCCBCCTTCEEEEETTTBSS--TTCCBCHHHHHTSGGGGSCEEEEECCSCBBCC-TTCTT
T ss_pred ccCCcccCCCEEEECccCCCC--CCeeEChHHCCCCCcCCceEEEEEcCCCCEec-CcCHH
Confidence 45653 36679999999864 3332211 3334567777765433334454 76653
No 228
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.89 E-value=15 Score=29.29 Aligned_cols=49 Identities=22% Similarity=0.384 Sum_probs=35.5
Q ss_pred cccccccCCC-CCceeecCCCCcccccccCCCCcceeeCCeeeEecCCCCcccccccccc
Q 005824 510 KHCHACARPA-DGFVYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCESK 568 (675)
Q Consensus 510 ~~C~~C~~~~-~g~~Y~C~~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~~ 568 (675)
..|..|++.. .+..-.|..|+--.|..|...|.. . .+...|.|..|...
T Consensus 17 ~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Ppl~----~------~P~g~W~C~~C~~~ 66 (92)
T 2e6r_A 17 YICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLP----E------IPRGIWRCPKCILA 66 (92)
T ss_dssp CCCSSSCCSGGGGGCEECTTTCCEECSSSSSSCCS----S------CCSSCCCCHHHHHH
T ss_pred CCCccCCCcCCCCCEEEcCCCCchhccccCCCCcc----c------CCCCCcCCccCcCc
Confidence 5699999865 456778999999999999985532 1 11245788888653
No 229
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=40.39 E-value=16 Score=29.79 Aligned_cols=56 Identities=18% Similarity=0.306 Sum_probs=39.7
Q ss_pred cccccccCC--CCCceeecC-CCCcccccccCCCCcceeeCCeeeEecCCCCccccccccccc
Q 005824 510 KHCHACARP--ADGFVYHCE-EKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCESKR 569 (675)
Q Consensus 510 ~~C~~C~~~--~~g~~Y~C~-~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~~~ 569 (675)
..|..|+++ ..+..-.|. .|+-=+|..|+.|....... +. ..+...+.|..|..+.
T Consensus 4 ~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~---i~-~~~~~~~~Cp~C~~~~ 62 (105)
T 2xb1_A 4 YPCGACRSEVNDDQDAILCEASCQKWFHRECTGMTESAYGL---LT-TEASAVWACDLCLKTK 62 (105)
T ss_dssp CBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCHHHHHH---HH-HCTTEEECCHHHHHTT
T ss_pred CCCCCCCCccCCCCCEEEecCCcccccccccCCcCHHHHHh---hc-cCCCCCEECccccCcC
Confidence 569999997 467788898 99988999999998533110 00 1222568899998654
No 230
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=40.26 E-value=46 Score=32.79 Aligned_cols=49 Identities=16% Similarity=0.205 Sum_probs=31.2
Q ss_pred CccEEEEecCCcChH----HHHHHHHHhcCC------------CcccccCCchhhHHhHHHHHHH
Q 005824 334 RVDDVVIVGGSARIP----KVQQLLQEFFNG------------KRLCQNINPDEAVAYGAAVQAA 382 (675)
Q Consensus 334 ~i~~VvLvGG~s~~p----~l~~~l~~~~~~------------~~v~~~~~p~~ava~Gaa~~a~ 382 (675)
+++.|+|-||.+..+ .|++.+++.... .++....-...|.+.||+.++.
T Consensus 224 dPe~IviGGgi~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~I~~s~lg~~a~l~GAa~l~~ 288 (302)
T 3epq_A 224 APXXIILGGGVMQQXQVFSYIYQYVPKIMNSYLDFSELSDDISDYIVPPRLGSNAGIIGTLVLAH 288 (302)
T ss_dssp CCSCEEEESSGGGCTHHHHHHHHHHHHHHTTCSCCGGGTTTGGGTEECCTTGGGHHHHHHHHHHH
T ss_pred CchhhhcCchhhhhHHHHHHHHHHHHHHHhhhccCcccccccCceEEECCcCChHHHHHHHHHHH
Confidence 457899999887654 445555554311 1233444556799999998874
No 231
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=39.75 E-value=15 Score=39.49 Aligned_cols=20 Identities=40% Similarity=0.454 Sum_probs=17.5
Q ss_pred cEEEEecccccEEEEEEECC
Q 005824 8 LGIGIDLGTTYSCVGVWQHN 27 (675)
Q Consensus 8 ~viGID~GTt~s~va~~~~g 27 (675)
.++|||+|||++++++++.+
T Consensus 3 ~~lgiDiGtts~k~~l~d~~ 22 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDHS 22 (504)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred EEEEEecCCcceEEEEECCC
Confidence 78999999999999998543
No 232
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=39.65 E-value=16 Score=38.95 Aligned_cols=19 Identities=42% Similarity=0.420 Sum_probs=16.5
Q ss_pred EEEEecccccEEEEEEECC
Q 005824 9 GIGIDLGTTYSCVGVWQHN 27 (675)
Q Consensus 9 viGID~GTt~s~va~~~~g 27 (675)
++|||+|||++++++++.+
T Consensus 2 ~lgiDiGtt~~k~~l~d~~ 20 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNEQ 20 (484)
T ss_dssp EEEEEECSSEEEEEEECTT
T ss_pred EEEEEecCcccEEEEECCC
Confidence 6999999999999988533
No 233
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=39.47 E-value=18 Score=28.43 Aligned_cols=33 Identities=18% Similarity=0.405 Sum_probs=26.7
Q ss_pred CccCCcccCCCC---CCcccccCCCceecccccccC
Q 005824 443 LSECNGCKRPAF---GLMYRCELCNFNLHIPCMFID 475 (675)
Q Consensus 443 ~~~C~~C~~~~~---g~~Y~C~~C~f~lH~~Ca~~~ 475 (675)
...|..|+.... +..-.|..|+--+|..|...|
T Consensus 16 ~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Pp 51 (88)
T 1wev_A 16 GLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQ 51 (88)
T ss_dssp CCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSC
T ss_pred CCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCc
Confidence 456999998743 567899999999999997644
No 234
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=39.34 E-value=22 Score=27.95 Aligned_cols=32 Identities=22% Similarity=0.336 Sum_probs=24.0
Q ss_pred ccccccccccccCCCCCCCCeEEeecC--CCeeEeccchHHH
Q 005824 560 QECIWCESKRLQGSASDNWGWSYVSKC--NNYHCHAFCSTEM 599 (675)
Q Consensus 560 ~~C~~C~~~~~~~~~~~~~~w~Y~c~~--c~~~lH~~C~~~~ 599 (675)
.+|.+|+++. .|-.=.|.. |...+|+.|+.+-
T Consensus 18 l~C~iC~~~~--------~GAciqC~~~~C~~~fHv~CA~~a 51 (87)
T 2lq6_A 18 LTCYLCKQKG--------VGASIQCHKANCYTAFHVTCAQKA 51 (87)
T ss_dssp CCBTTTTBCC--------SSCEEECSCTTTCCEEEHHHHHHH
T ss_pred CCCcCCCCCC--------CcEeEecCCCCCCCcCcHHHHHHC
Confidence 3799998753 244556753 9999999999874
No 235
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=39.25 E-value=11 Score=29.46 Aligned_cols=46 Identities=24% Similarity=0.648 Sum_probs=31.3
Q ss_pred cccccccCCC----CC-ceeecCCCCcccccccCCCCcceeeCCeeeEecCCCCcccccccccc
Q 005824 510 KHCHACARPA----DG-FVYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCESK 568 (675)
Q Consensus 510 ~~C~~C~~~~----~g-~~Y~C~~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~~ 568 (675)
..|.+||.++ .| .+--|.+|.|.+..-|.-. ..++....|.-|+.+
T Consensus 17 qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEY-------------ErkeG~q~CpqCktr 67 (93)
T 1weo_A 17 QFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEY-------------ERREGTQNCPQCKTR 67 (93)
T ss_dssp CBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHH-------------HHHTSCSSCTTTCCC
T ss_pred CccccccCccccCCCCCEEEeeeccCChhhHHHHHH-------------HHhccCccccccCCc
Confidence 5699999975 44 5667999999988777522 223344567777654
No 236
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=38.65 E-value=15 Score=27.99 Aligned_cols=55 Identities=18% Similarity=0.406 Sum_probs=38.5
Q ss_pred ccccccccCCCC-CceeecCCCCcccccccCCCCcceeeCCeeeEecCCCCccccccccccc
Q 005824 509 NKHCHACARPAD-GFVYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCESKR 569 (675)
Q Consensus 509 ~~~C~~C~~~~~-g~~Y~C~~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~~~ 569 (675)
..+| .|+++-. ++.-.|..|+-=.|..|+.++..... .+......+.|..|..+.
T Consensus 16 ~~~C-~C~~~~~~~~MI~Cd~C~~WfH~~Cvgl~~~~~~-----~l~~~~~~~~C~~C~~~~ 71 (76)
T 1wem_A 16 ALYC-ICRQPHNNRFMICCDRCEEWFHGDCVGISEARGR-----LLERNGEDYICPNCTILS 71 (76)
T ss_dssp CCCS-TTCCCCCSSCEEECSSSCCEEEHHHHSCCHHHHH-----HHHHHTCCCCCHHHHHHS
T ss_pred CCEE-ECCCccCCCCEEEeCCCCCcEeCeEEccchhhhh-----hccCCCCeEECcCCcCcc
Confidence 3678 8999764 58899999998899999999754211 010112457899997653
No 237
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=38.64 E-value=24 Score=27.88 Aligned_cols=45 Identities=20% Similarity=0.409 Sum_probs=33.6
Q ss_pred cccccccCCCCCceeecCCCC---cccccccCCCCcceeeCCeeeEecCCCCcccccc-ccc
Q 005824 510 KHCHACARPADGFVYHCEEKG---RNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIW-CES 567 (675)
Q Consensus 510 ~~C~~C~~~~~g~~Y~C~~C~---f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~-C~~ 567 (675)
.+| .|++...|..-.|..|+ --+|..|+.|+... ...+.|.. |.+
T Consensus 27 ~yC-iC~~~~~g~MI~CD~c~C~~eWfH~~CVgl~~~p------------~~~W~Cp~cC~~ 75 (90)
T 2jmi_A 27 VYC-FCRNVSYGPMVACDNPACPFEWFHYGCVGLKQAP------------KGKWYCSKDCKE 75 (90)
T ss_dssp CCS-TTTCCCSSSEECCCSSSCSCSCEETTTSSCSSCT------------TSCCCSSHHHHH
T ss_pred cEE-EeCCCCCCCEEEecCCCCccccCcCccCCCCcCC------------CCCccCChhhcc
Confidence 679 89987778888899865 46899999987532 13577887 764
No 238
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=38.45 E-value=15 Score=28.09 Aligned_cols=54 Identities=24% Similarity=0.353 Sum_probs=39.9
Q ss_pred cccccccCC-CCCceeecC--CCCcccccccCCCCcceeeCCeeeEecCCCCccccccccccc
Q 005824 510 KHCHACARP-ADGFVYHCE--EKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCESKR 569 (675)
Q Consensus 510 ~~C~~C~~~-~~g~~Y~C~--~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~~~ 569 (675)
.+| .|+.. ..|+.-.|. .|..=.|..|+.++...... .......+.|..|....
T Consensus 17 ~~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~-----~~~~~~~~~C~~C~~~~ 73 (78)
T 1wew_A 17 VRC-VCGNSLETDSMIQCEDPRCHVWQHVGCVILPDKPMDG-----NPPLPESFYCEICRLTS 73 (78)
T ss_dssp CCC-SSCCCCCCSCEEECSSTTTCCEEEHHHHSCCCTTTCS-----CSCSCSSCCCHHHHHCC
T ss_pred EEe-ECCCcCCCCCEEEECCccCCccccCEEEccccccccc-----cccCCCCEECCCCCccc
Confidence 679 79997 688999999 99999999999998653210 01122457899997653
No 239
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=37.97 E-value=41 Score=24.62 Aligned_cols=31 Identities=26% Similarity=0.660 Sum_probs=25.0
Q ss_pred CccCCcccCCCCCCcccccCCCceecccccccC
Q 005824 443 LSECNGCKRPAFGLMYRCELCNFNLHIPCMFID 475 (675)
Q Consensus 443 ~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~~~ 475 (675)
...|..|+.. |..-.|..|+-.+|..|...|
T Consensus 8 ~~~C~vC~~~--g~ll~CD~C~~~fH~~Cl~pp 38 (66)
T 1xwh_A 8 EDECAVCRDG--GELICCDGCPRAFHLACLSPP 38 (66)
T ss_dssp CCSBSSSSCC--SSCEECSSCCCEECTTTSSSC
T ss_pred CCCCccCCCC--CCEEEcCCCChhhcccccCCC
Confidence 4569999864 567899999999999997643
No 240
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=37.18 E-value=26 Score=24.08 Aligned_cols=30 Identities=23% Similarity=0.654 Sum_probs=24.4
Q ss_pred cCCcccCCCC-CCcccccCCCceeccccccc
Q 005824 445 ECNGCKRPAF-GLMYRCELCNFNLHIPCMFI 474 (675)
Q Consensus 445 ~C~~C~~~~~-g~~Y~C~~C~f~lH~~Ca~~ 474 (675)
.|..|+..+. +..-.|..|+--+|..|...
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p 32 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRP 32 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCT
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCCC
Confidence 4888988763 46688999999999999764
No 241
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=36.55 E-value=44 Score=24.41 Aligned_cols=40 Identities=15% Similarity=0.369 Sum_probs=25.0
Q ss_pred CccCCcccCCCCCCcccccCCCceecccccccCCcCccccCCCCCcceEE
Q 005824 443 LSECNGCKRPAFGLMYRCELCNFNLHIPCMFIDRKPAAKHEFFGNSTFKS 492 (675)
Q Consensus 443 ~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~~~~~~~~~h~~~~~~~l~~ 492 (675)
...|..|+....-..|.| .|+-.+ |+. ..+|--|+++|-+
T Consensus 15 ~~rC~~C~kkvgl~~f~C-rCg~~F---C~~------HR~~e~H~C~fDy 54 (64)
T 1wg2_A 15 NNRCFSCNKKVGVMGFKC-KCGSTF---CGS------HRYPEKHECSFDF 54 (64)
T ss_dssp SCSCTTTCCCCTTSCEEC-TTSCEE---CSS------SCSSTTTTCCCCC
T ss_pred CCcChhhCCcccccCeEe-ecCCEe---ccc------CCCccccCCCcch
Confidence 457999998744345999 797655 543 2345455555433
No 242
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=36.03 E-value=37 Score=35.01 Aligned_cols=45 Identities=18% Similarity=0.314 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCccEEEEecCCc-ChHHHHHHHHHhc
Q 005824 310 NMDLFRKCIKHVDMCLRNGKMDKSRVDDVVIVGGSA-RIPKVQQLLQEFF 358 (675)
Q Consensus 310 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s-~~p~l~~~l~~~~ 358 (675)
++-.+.+|.+.|-...... ..+|.|+++||-+ .++.+++.+.+.+
T Consensus 310 ~d~f~yri~k~IGa~aa~L----ggvDaIVFTgGIGEns~~vR~~i~~~l 355 (415)
T 2e1z_A 310 IKTFVHRIARHIAGHAASL----HRLDGIIFTGGIGENSVLIRQLVIEHL 355 (415)
T ss_dssp HHHHHHHHHHHHHHHHTTC----SSCCEEEEEHHHHHHCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHh----CCCCEEEECccccccCHHHHHHHHhhH
Confidence 3344444555544443332 4589999999999 9999999999876
No 243
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=35.63 E-value=96 Score=32.85 Aligned_cols=25 Identities=32% Similarity=0.620 Sum_probs=21.6
Q ss_pred CCceEEEEEeCCCcEEEEEEEEeCC
Q 005824 195 SEKNVLIFDLGGGTFDVSLLTIGKG 219 (675)
Q Consensus 195 ~~~~vlvvDiGggT~dvsv~~~~~~ 219 (675)
+...++.+|+||+++-+.++++...
T Consensus 78 E~G~~LalDlGGTn~Rv~~V~l~g~ 102 (485)
T 3o8m_A 78 ETGDFLALDLGGTNLRVVLVKLGGN 102 (485)
T ss_dssp CEEEEEEEEESSSEEEEEEEEEESS
T ss_pred cceEEEEEEecCCeEEEEEEEECCC
Confidence 3457899999999999999999764
No 244
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=35.62 E-value=26 Score=26.77 Aligned_cols=55 Identities=27% Similarity=0.544 Sum_probs=37.3
Q ss_pred CccccccccccccccCCC-CCceeecCCCCcccccccCCCCcceeeCCeeeEecCCCCccccccccc
Q 005824 502 TRDCRDCNKHCHACARPA-DGFVYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCES 567 (675)
Q Consensus 502 ~~~~~~~~~~C~~C~~~~-~g~~Y~C~~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~ 567 (675)
.|.|..+ .|..|++.. .+....|..|+-..|..|..-|..- .+....+.|..|..
T Consensus 21 ~W~C~~C--~C~vC~~~~d~~~ll~CD~C~~~yH~~Cl~PpL~~---------~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 21 NRLCRVC--ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSS---------VPSEDEWYCPECRN 76 (77)
T ss_dssp TSCCTTT--SBTTTCCCSCGGGEEECTTTCCEEETTTSSSCCSS---------CCSSSCCCCTTTC-
T ss_pred CCCCCCC--cCCccCCCCCCcceeEeCCCCCccCcccCCCcccC---------CCCCCceECcCccc
Confidence 4666665 589998864 4567889999999999999755321 11212277888864
No 245
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=35.27 E-value=30 Score=25.30 Aligned_cols=33 Identities=21% Similarity=0.391 Sum_probs=26.3
Q ss_pred CccCCcccCCC---CCCcccccCCCceecccccccC
Q 005824 443 LSECNGCKRPA---FGLMYRCELCNFNLHIPCMFID 475 (675)
Q Consensus 443 ~~~C~~C~~~~---~g~~Y~C~~C~f~lH~~Ca~~~ 475 (675)
...|..|+..- .+..-.|..|+--+|..|...|
T Consensus 6 ~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~ 41 (66)
T 2yt5_A 6 SGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPH 41 (66)
T ss_dssp CCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSC
T ss_pred CCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCc
Confidence 45699998763 2667999999999999997654
No 246
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.00 E-value=26 Score=27.17 Aligned_cols=60 Identities=13% Similarity=0.281 Sum_probs=35.0
Q ss_pred cccccccCCCCCc--eeecCCCCcccccccCCCCcceeeCCeeeEecCCCCccccccccccc
Q 005824 510 KHCHACARPADGF--VYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCESKR 569 (675)
Q Consensus 510 ~~C~~C~~~~~g~--~Y~C~~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~~~ 569 (675)
..|..|+....-+ ..||..|+.-+.-.|...-.++...+...........+.|..|-...
T Consensus 15 ~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~~~~l~~~g~~~p~~~~~~~RVC~~C~~~l 76 (84)
T 1x4u_A 15 GNCTGCSATFSVLKKRRSCSNCGNSFCSRCCSFKVPKSSMGATAPEAQRETVFVCASCNQTL 76 (84)
T ss_dssp SSCSSSCCCCCSSSCCEECSSSCCEECTTTSCEEECSTTTSCCCSSCSSCCEEECHHHHHHH
T ss_pred CcCcCcCCccccchhhhhhcCCCcEEChhhcCCceecccccccCccccCCccEECHHHHHHH
Confidence 5699999975333 49999999988888875432222111110000112346788886543
No 247
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=34.73 E-value=50 Score=23.73 Aligned_cols=31 Identities=29% Similarity=0.680 Sum_probs=24.6
Q ss_pred CccCCcccCCCCCCcccccCCCceecccccccC
Q 005824 443 LSECNGCKRPAFGLMYRCELCNFNLHIPCMFID 475 (675)
Q Consensus 443 ~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~~~ 475 (675)
...|..|+.. |..-.|..|+-.+|..|...|
T Consensus 9 ~~~C~vC~~~--g~ll~Cd~C~~~fH~~Cl~pp 39 (61)
T 1mm2_A 9 MEFCRVCKDG--GELLCCDTCPSSYHIHCLNPP 39 (61)
T ss_dssp CSSCTTTCCC--SSCBCCSSSCCCBCSSSSSSC
T ss_pred CCcCCCCCCC--CCEEEcCCCCHHHcccccCCC
Confidence 4459999863 567899999999999997643
No 248
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=33.35 E-value=51 Score=24.04 Aligned_cols=41 Identities=17% Similarity=0.317 Sum_probs=25.2
Q ss_pred cCccCCcccCCCCCCcccccCCCceecccccccCCcCccccCCCCCcceEE
Q 005824 442 ILSECNGCKRPAFGLMYRCELCNFNLHIPCMFIDRKPAAKHEFFGNSTFKS 492 (675)
Q Consensus 442 ~~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~~~~~~~~~h~~~~~~~l~~ 492 (675)
.+..|..|+....-..|+| .|+..+ |+. ..+|-.|+++|-+
T Consensus 14 ~~~rC~~C~kkvgl~~f~C-rCg~~F---C~~------HRy~e~H~C~fDy 54 (64)
T 1wfh_A 14 RPNRCTVCRKRVGLTGFMC-RCGTTF---CGS------HRYPEVHGCTFDF 54 (64)
T ss_dssp SCCCCTTTCCCCCTTCEEC-SSSCEE---CTT------TCSTTTTTCCCCC
T ss_pred cCCcChhhCCccCccCEEe-ecCCEe---ccc------cCCcccCCCCchh
Confidence 3467999998744335999 597655 543 2345455555443
No 249
>2dkt_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.89.1.1 g.93.1.1 PDB: 2k2c_A
Probab=32.85 E-value=23 Score=30.54 Aligned_cols=20 Identities=20% Similarity=0.471 Sum_probs=15.7
Q ss_pred cccccCCCCCceeecCCCCc
Q 005824 512 CHACARPADGFVYHCEEKGR 531 (675)
Q Consensus 512 C~~C~~~~~g~~Y~C~~C~f 531 (675)
|..|+.....-+|||..|+.
T Consensus 104 CgiCR~G~~~~ffHC~~C~~ 123 (143)
T 2dkt_A 104 CGICRIGPKEDFFHCLKCNL 123 (143)
T ss_dssp TTEEEESCGGGEEEETTTTE
T ss_pred CCceeccCCcCcEECCcCCe
Confidence 77777766667999999984
No 250
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=32.30 E-value=70 Score=32.45 Aligned_cols=18 Identities=11% Similarity=0.051 Sum_probs=15.1
Q ss_pred cCCceeEeeChhHHHHHH
Q 005824 169 AGLNVLKIISEPTAAAIA 186 (675)
Q Consensus 169 Agl~~v~li~Ep~Aaa~~ 186 (675)
.++.++.+.++..|+|++
T Consensus 127 ~~~~pv~v~NDa~aaalg 144 (373)
T 2q2r_A 127 FPPGHSAILNDLEAGGFG 144 (373)
T ss_dssp SCTTSEEEEEHHHHHHHH
T ss_pred cCCCCEEEEccHhHHhcc
Confidence 355578999999999998
No 251
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=32.02 E-value=26 Score=31.79 Aligned_cols=57 Identities=18% Similarity=0.427 Sum_probs=37.4
Q ss_pred cccccccCCC-----CCceeecCCCCcccccccCCCCcceeeCCeeeEecCCCCccccccccccc
Q 005824 510 KHCHACARPA-----DGFVYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCESKR 569 (675)
Q Consensus 510 ~~C~~C~~~~-----~g~~Y~C~~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~~~ 569 (675)
.+|..|++.- .++.-.|..|+.=+|..|..+..... ..+.-.+....+.|..|....
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~---e~~~~~pe~~~y~Cp~C~~~~ 64 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMY---EILSNLPESVAYTCVNCTERH 64 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHH---HHHHHSHHHHCCCCTTTCCSS
T ss_pred CcCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHH---HHhhcCCCCCeeECcCCCCCC
Confidence 5699998852 23478999999999999998864211 000000111257899998864
No 252
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=32.01 E-value=52 Score=25.98 Aligned_cols=34 Identities=24% Similarity=0.658 Sum_probs=26.4
Q ss_pred ccCccCCcccCCCCCCcccccC--CCc-eecccccccC
Q 005824 441 KILSECNGCKRPAFGLMYRCEL--CNF-NLHIPCMFID 475 (675)
Q Consensus 441 ~~~~~C~~C~~~~~g~~Y~C~~--C~f-~lH~~Ca~~~ 475 (675)
....+| .|..+..|.+-.|+. |.+ -+|..|..++
T Consensus 34 ~e~~yC-iC~~~~~g~MI~CD~~dC~~~WfH~~CVgl~ 70 (91)
T 1weu_A 34 NEPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVGLT 70 (91)
T ss_dssp CCCBCS-TTCCBCCSCCCCCSCSSCSCCCCCSTTTTCS
T ss_pred CCCcEE-ECCCCCCCCEeEecCCCCCCCCEecccCCcC
Confidence 345678 899887788889999 554 5899998765
No 253
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=31.75 E-value=14 Score=32.45 Aligned_cols=36 Identities=8% Similarity=0.024 Sum_probs=29.5
Q ss_pred CcccccccccccccCCCCCCCCeEEeec--CCCeeEeccchHHHHHHh
Q 005824 558 LSQECIWCESKRLQGSASDNWGWSYVSK--CNNYHCHAFCSTEMLLEN 603 (675)
Q Consensus 558 ~~~~C~~C~~~~~~~~~~~~~~w~Y~c~--~c~~~lH~~C~~~~~~~~ 603 (675)
....|.+|+.- +=.|.|+ .|...+...|++.++++.
T Consensus 78 ~~~yC~wC~~G----------g~l~~Cdn~~C~r~FC~~CI~~nvG~~ 115 (159)
T 3a1b_A 78 YQSYCTICCGG----------REVLMCGNNNCCRCFCVECVDLLVGPG 115 (159)
T ss_dssp SBSSCTTTSCC----------SEEEECSSTTTCCEEEHHHHHHHTCTT
T ss_pred CcceeeEecCC----------CeEEeeCCCCCCCchhHHHHHHhcCHh
Confidence 34579999973 4689998 699999999999987764
No 254
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=31.54 E-value=20 Score=27.67 Aligned_cols=31 Identities=19% Similarity=0.520 Sum_probs=26.8
Q ss_pred ccCCcccCCCCCCcccccCCCceeccccccc
Q 005824 444 SECNGCKRPAFGLMYRCELCNFNLHIPCMFI 474 (675)
Q Consensus 444 ~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~~ 474 (675)
..|..|..-..+..|.|..|.=.+|..|-..
T Consensus 16 ~~C~VC~~~t~~~l~pCRvC~RvfH~~CL~r 46 (89)
T 1wil_A 16 EMCDVCEVWTAESLFPCRVCTRVFHDGCLRR 46 (89)
T ss_dssp CCCTTTCCCCSSCCSSCSSSSSCCCHHHHHH
T ss_pred cccCccccccccceeccccccccccHhhccc
Confidence 4499999777888899999999999999654
No 255
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=30.52 E-value=53 Score=23.43 Aligned_cols=31 Identities=23% Similarity=0.654 Sum_probs=25.0
Q ss_pred CccCCcccCCCCCCcccccCCCceecccccccC
Q 005824 443 LSECNGCKRPAFGLMYRCELCNFNLHIPCMFID 475 (675)
Q Consensus 443 ~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~~~ 475 (675)
...|..|+.. |..-.|..|+-.+|..|...|
T Consensus 5 ~~~C~vC~~~--g~ll~Cd~C~~~fH~~Cl~pp 35 (60)
T 2puy_A 5 EDFCSVCRKS--GQLLMCDTCSRVYHLDCLDPP 35 (60)
T ss_dssp CSSCTTTCCC--SSCEECSSSSCEECGGGSSSC
T ss_pred CCCCcCCCCC--CcEEEcCCCCcCEECCcCCCC
Confidence 3459999875 567889999999999998643
No 256
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=30.30 E-value=1.2e+02 Score=33.11 Aligned_cols=38 Identities=8% Similarity=0.119 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCccEEEEecCCcChH
Q 005824 311 MDLFRKCIKHVDMCLRNGKMDKSRVDDVVIVGGSARIP 348 (675)
Q Consensus 311 ~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p 348 (675)
+-+++.+-+++.+...+++....+|..++++|-....-
T Consensus 266 ~~v~~~in~li~~l~~~~~i~~~~I~~~~v~GNt~M~h 303 (631)
T 3zyy_X 266 KAVLSTINELIFQLCKEHGVEKKEIMAAVVAGNTTMTH 303 (631)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEECHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHeeEEEEEccHHHHH
Confidence 34556667777888888888889999999998765443
No 257
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=29.83 E-value=42 Score=26.48 Aligned_cols=34 Identities=21% Similarity=0.409 Sum_probs=26.6
Q ss_pred ccCccCCcccCCCCCCcccccCCC---ceecccccccC
Q 005824 441 KILSECNGCKRPAFGLMYRCELCN---FNLHIPCMFID 475 (675)
Q Consensus 441 ~~~~~C~~C~~~~~g~~Y~C~~C~---f~lH~~Ca~~~ 475 (675)
+...+| .|..+.+|.+=.|+.|+ =-+|..|..++
T Consensus 24 ~~~~yC-iC~~~~~g~MI~CD~c~C~~eWfH~~CVgl~ 60 (90)
T 2jmi_A 24 QEEVYC-FCRNVSYGPMVACDNPACPFEWFHYGCVGLK 60 (90)
T ss_dssp CCSCCS-TTTCCCSSSEECCCSSSCSCSCEETTTSSCS
T ss_pred CCCcEE-EeCCCCCCCEEEecCCCCccccCcCccCCCC
Confidence 345678 89988778778899976 56899998765
No 258
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=29.69 E-value=53 Score=24.73 Aligned_cols=25 Identities=16% Similarity=0.519 Sum_probs=18.1
Q ss_pred cCccCCcccCCCCCCcccccCCCcee
Q 005824 442 ILSECNGCKRPAFGLMYRCELCNFNL 467 (675)
Q Consensus 442 ~~~~C~~C~~~~~g~~Y~C~~C~f~l 467 (675)
....|..|+....-..|+| .|+..+
T Consensus 24 ~~~RC~~C~kkvgL~~f~C-rCg~~F 48 (74)
T 1wfp_A 24 TATRCLSCNKKVGVTGFKC-RCGSTF 48 (74)
T ss_dssp CCCBCSSSCCBCTTTCEEC-TTSCEE
T ss_pred cCccchhhcCcccccceEe-ccCCEe
Confidence 3467999998754446999 698655
No 259
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=29.30 E-value=72 Score=32.84 Aligned_cols=46 Identities=13% Similarity=0.018 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCccEEEEecCCc-ChHHHHHHHHHhc
Q 005824 309 LNMDLFRKCIKHVDMCLRNGKMDKSRVDDVVIVGGSA-RIPKVQQLLQEFF 358 (675)
Q Consensus 309 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s-~~p~l~~~l~~~~ 358 (675)
+++-.+.++.+.|-...... ..+|.|+++||-+ .++.+++.+.+.+
T Consensus 301 A~d~f~yri~k~IGa~~a~L----ggvDaiVFTgGIGEns~~vR~~i~~~l 347 (408)
T 1g99_A 301 ALEIFAYKVKKFIGEYSAVL----NGADAVVFTAGIGENSASIRKRILTGL 347 (408)
T ss_dssp HHHHHHHHHHHHHHHHHHHT----TSCSEEEEEHHHHHHCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHhh----CCCCEEEECccccccCHHHHHHHHhhh
Confidence 44445556666666555543 3589999999999 9999999999766
No 260
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=29.30 E-value=10 Score=37.42 Aligned_cols=59 Identities=19% Similarity=0.055 Sum_probs=34.1
Q ss_pred CCcEEEEeCCCCCHHHHHHHHHHHHH-cCC-ceeEeeChhHHHHHHhccccCCCCCceEEEEEeCCCc
Q 005824 143 VKNAVVTVPAYFTDSQRQATKDAGAM-AGL-NVLKIISEPTAAAIAYGLHRKASSEKNVLIFDLGGGT 208 (675)
Q Consensus 143 ~~~~vitvP~~~~~~~r~~l~~a~~~-Agl-~~v~li~Ep~Aaa~~~~~~~~~~~~~~vlvvDiGggT 208 (675)
+..+.+++|..- ......+++.++. .++ .++.+.++..+|+++-. . . ...+++=+|-|.
T Consensus 58 i~~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aalge~---g--~-~~~v~v~~GTGi 118 (291)
T 1zxo_A 58 FNAVYFYGAGCT-PEKAPVLRRAIADSLPVIGNIKANSDMLAAAHGLC---G--Q-KAGIACILGTGS 118 (291)
T ss_dssp ---CEEECTTCC-TTTTHHHHHHHHHHSCCCSCCEEECSHHHHHHHTT---T--T-SCBEEEEESSSE
T ss_pred ccEEEEEcCCCC-HHHHHHHHHHHHHhcCCCceEEEECcHHHHHHhhc---C--C-CCcEEEEeCCCh
Confidence 346788888754 2222345554443 454 47899999999998653 1 1 233444477766
No 261
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=29.28 E-value=39 Score=27.10 Aligned_cols=32 Identities=38% Similarity=0.716 Sum_probs=25.2
Q ss_pred CccCCcccCCC-CCCcccccCCCceecccccccC
Q 005824 443 LSECNGCKRPA-FGLMYRCELCNFNLHIPCMFID 475 (675)
Q Consensus 443 ~~~C~~C~~~~-~g~~Y~C~~C~f~lH~~Ca~~~ 475 (675)
...| .|+... .+.+-.|..|+--+|..|..++
T Consensus 28 ~vrC-iC~~~~~~~~mi~Cd~C~~w~H~~C~~~~ 60 (98)
T 2lv9_A 28 VTRC-ICGFTHDDGYMICCDKCSVWQHIDCMGID 60 (98)
T ss_dssp BCCC-TTSCCSCSSCEEEBTTTCBEEETTTTTCC
T ss_pred CEEe-ECCCccCCCcEEEcCCCCCcCcCcCCCCC
Confidence 3458 688775 4677999999999999998654
No 262
>2cup_A Skeletal muscle LIM-protein 1; four and half LIM domains protein 1, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 g.39.1.3
Probab=28.86 E-value=98 Score=24.38 Aligned_cols=29 Identities=24% Similarity=0.365 Sum_probs=15.0
Q ss_pred ccCCcccCCCCCCcccccCCCceeccccc
Q 005824 444 SECNGCKRPAFGLMYRCELCNFNLHIPCM 472 (675)
Q Consensus 444 ~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca 472 (675)
..|.+|.+++....+.-..=+-..|..|.
T Consensus 6 ~~C~~C~~~I~~~~~~~~a~~~~~H~~CF 34 (101)
T 2cup_A 6 SGCVECRKPIGADSKEVHYKNRFWHDTCF 34 (101)
T ss_dssp CBCSSSCCBCCSSSCEEEETTEEEETTTC
T ss_pred CcCcccCCcccCCceEEEECccChhhcCC
Confidence 45888888875311111122445566554
No 263
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=28.60 E-value=18 Score=38.80 Aligned_cols=46 Identities=13% Similarity=0.068 Sum_probs=32.9
Q ss_pred cEEEEeCCCCCHHHHHHHHHHHHHcCCceeEee-ChhHHHHHHhccc
Q 005824 145 NAVVTVPAYFTDSQRQATKDAGAMAGLNVLKII-SEPTAAAIAYGLH 190 (675)
Q Consensus 145 ~~vitvP~~~~~~~r~~l~~a~~~Agl~~v~li-~Ep~Aaa~~~~~~ 190 (675)
.++.-+|..++.+.-.++.+++...|++....+ -.-.+..+...++
T Consensus 132 ~~I~v~~~~i~~~d~a~~in~a~~~g~~i~~~i~q~dd~vli~nrl~ 178 (607)
T 1nbw_A 132 GWIVLIDDAVDFLDAVWWLNEALDRGINVVAAILKKDDGVLVNNRLR 178 (607)
T ss_dssp CEEEEECSSSCHHHHHHHHHHHHHTTCCEEEEEESSSCHHHHHTTSS
T ss_pred CEEEECCCccCHHHHHHHHHHHHHcCCcEEEEEEecCCEEEEcccCC
Confidence 455559999999999999999999998765443 3344555544443
No 264
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=28.46 E-value=15 Score=37.57 Aligned_cols=35 Identities=11% Similarity=0.060 Sum_probs=28.0
Q ss_pred cccccccccccccCCCCCCCCeEEeec--CCCeeEeccchHHHHHHh
Q 005824 559 SQECIWCESKRLQGSASDNWGWSYVSK--CNNYHCHAFCSTEMLLEN 603 (675)
Q Consensus 559 ~~~C~~C~~~~~~~~~~~~~~w~Y~c~--~c~~~lH~~C~~~~~~~~ 603 (675)
...|.+|+.- +=.|.|+ .|...++..|++.+.++.
T Consensus 93 ~~yCr~C~~G----------g~l~~Cdn~~C~r~FC~~Ci~~n~g~~ 129 (386)
T 2pv0_B 93 QSYCSICCSG----------ETLLICGNPDCTRCYCFECVDSLVGPG 129 (386)
T ss_dssp BCSCTTTCCC----------SSCEECCSTTCCCEECHHHHHHHTCTT
T ss_pred cccceEcCCC----------CeEEEeCCCCCCcchHHHHHHHhcChh
Confidence 4579999874 3478898 799999999999987544
No 265
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=28.03 E-value=2.2e+02 Score=29.74 Aligned_cols=26 Identities=23% Similarity=0.487 Sum_probs=22.1
Q ss_pred CCceEEEEEeCCCcEEEEEEEEeCCE
Q 005824 195 SEKNVLIFDLGGGTFDVSLLTIGKGI 220 (675)
Q Consensus 195 ~~~~vlvvDiGggT~dvsv~~~~~~~ 220 (675)
+...++.+|+||+++-+.++......
T Consensus 59 E~G~~laiDlGGTnirv~lV~~~G~~ 84 (457)
T 2yhx_A 59 QAGSFLAIVMGGGDLEVILISLAGRQ 84 (457)
T ss_dssp CCEEEEEEEECSSEEEEEEEEEETTE
T ss_pred ccceEEEEEeCCCeEEEEEEEeCCCe
Confidence 45568999999999999999987654
No 266
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=27.87 E-value=40 Score=24.69 Aligned_cols=36 Identities=11% Similarity=0.127 Sum_probs=24.5
Q ss_pred CcccccccccccccCCCCCCCCeEEeec-CCCeeEeccchHHH
Q 005824 558 LSQECIWCESKRLQGSASDNWGWSYVSK-CNNYHCHAFCSTEM 599 (675)
Q Consensus 558 ~~~~C~~C~~~~~~~~~~~~~~w~Y~c~-~c~~~lH~~C~~~~ 599 (675)
....|..|++... .....=.|. .|.--+|..|+.-.
T Consensus 7 ~~~~C~~C~~p~~------~~~~mI~CD~~C~~WfH~~Cvglt 43 (65)
T 2vpb_A 7 PVYPCGICTNEVN------DDQDAILCEASCQKWFHRICTGMT 43 (65)
T ss_dssp --CBCTTTCSBCC------TTSCEEEBTTTTCCEEEHHHHTCC
T ss_pred CcCcCccCCCccC------CCCCeEecccCccccCchhccCCC
Confidence 3467999999752 122334788 89999999998543
No 267
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=27.84 E-value=37 Score=27.62 Aligned_cols=33 Identities=21% Similarity=0.440 Sum_probs=27.4
Q ss_pred CccCCcccCC--CCCCccccc-CCCceecccccccC
Q 005824 443 LSECNGCKRP--AFGLMYRCE-LCNFNLHIPCMFID 475 (675)
Q Consensus 443 ~~~C~~C~~~--~~g~~Y~C~-~C~f~lH~~Ca~~~ 475 (675)
.+.|..|..+ ..+.+-.|. .|+-=+|..|..++
T Consensus 3 ~~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt 38 (105)
T 2xb1_A 3 VYPCGACRSEVNDDQDAILCEASCQKWFHRECTGMT 38 (105)
T ss_dssp CCBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCC
T ss_pred cCCCCCCCCccCCCCCEEEecCCcccccccccCCcC
Confidence 4569999998 356678898 99999999998775
No 268
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.66 E-value=26 Score=26.55 Aligned_cols=32 Identities=16% Similarity=0.281 Sum_probs=25.2
Q ss_pred ccccccccccccCCCCCCCCeEEeecCCCeeEeccchHHHH
Q 005824 560 QECIWCESKRLQGSASDNWGWSYVSKCNNYHCHAFCSTEML 600 (675)
Q Consensus 560 ~~C~~C~~~~~~~~~~~~~~w~Y~c~~c~~~lH~~C~~~~~ 600 (675)
..|.+|..... .-.+|..|+..+|..|+.+-.
T Consensus 16 ~~C~IC~~~i~---------~g~~C~~C~h~fH~~Ci~kWl 47 (74)
T 2ct0_A 16 KICNICHSLLI---------QGQSCETCGIRMHLPCVAKYF 47 (74)
T ss_dssp CBCSSSCCBCS---------SSEECSSSCCEECHHHHHHHS
T ss_pred CcCcchhhHcc---------cCCccCCCCchhhHHHHHHHH
Confidence 47999998762 235788899999999998753
No 269
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=27.51 E-value=26 Score=25.57 Aligned_cols=23 Identities=26% Similarity=0.505 Sum_probs=13.8
Q ss_pred cccccccCCC---CCceeecCCCCcc
Q 005824 510 KHCHACARPA---DGFVYHCEEKGRN 532 (675)
Q Consensus 510 ~~C~~C~~~~---~g~~Y~C~~C~f~ 532 (675)
+.|..||... .+...+|..|++.
T Consensus 22 Y~C~~Cg~~~~l~~~~~iRC~~CG~R 47 (63)
T 3h0g_L 22 YLCADCGARNTIQAKEVIRCRECGHR 47 (63)
T ss_dssp CBCSSSCCBCCCCSSSCCCCSSSCCC
T ss_pred EECCCCCCeeecCCCCceECCCCCcE
Confidence 5577776654 3345667777654
No 270
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.40 E-value=38 Score=25.27 Aligned_cols=33 Identities=21% Similarity=0.472 Sum_probs=26.0
Q ss_pred cCccCCcccCCCCCCcccccCCC---ceecccccccC
Q 005824 442 ILSECNGCKRPAFGLMYRCELCN---FNLHIPCMFID 475 (675)
Q Consensus 442 ~~~~C~~C~~~~~g~~Y~C~~C~---f~lH~~Ca~~~ 475 (675)
.+.+|- |..+..|.+-.|+.|| --+|..|..++
T Consensus 5 ~~~yC~-C~~~~~g~MI~CD~cdC~~~WfH~~Cvgl~ 40 (70)
T 1x4i_A 5 SSGYCI-CNQVSYGEMVGCDNQDCPIEWFHYGCVGLT 40 (70)
T ss_dssp CCCCST-TSCCCCSSEECCSCTTCSCCCEEHHHHTCS
T ss_pred CCeEEE-cCCCCCCCEeEeCCCCCCccCCcccccccC
Confidence 456685 8888788888999986 46899998765
No 271
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=27.40 E-value=20 Score=34.12 Aligned_cols=31 Identities=29% Similarity=0.738 Sum_probs=25.8
Q ss_pred cCccCCcccCCCCCCcccccCCCceecccccc
Q 005824 442 ILSECNGCKRPAFGLMYRCELCNFNLHIPCMF 473 (675)
Q Consensus 442 ~~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~ 473 (675)
....|..|++.+. ...+|..|+-.+|..|..
T Consensus 179 ~i~~C~iC~~iv~-~g~~C~~C~~~~H~~C~~ 209 (238)
T 3nw0_A 179 AVKICNICHSLLI-QGQSCETCGIRMHLPCVA 209 (238)
T ss_dssp TCCBCTTTCSBCS-SCEECSSSCCEECHHHHH
T ss_pred CCCcCcchhhHHh-CCcccCccChHHHHHHHH
Confidence 3566999998876 349999999999999974
No 272
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=27.40 E-value=42 Score=23.20 Aligned_cols=46 Identities=20% Similarity=0.423 Sum_probs=33.2
Q ss_pred cccccccCCCC-CceeecCCCCcccccccCCCCcceeeCCeeeEecCCCCccccccccc
Q 005824 510 KHCHACARPAD-GFVYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCES 567 (675)
Q Consensus 510 ~~C~~C~~~~~-g~~Y~C~~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~ 567 (675)
.+| .|+++-. ++.-.|..|+-=.|..|+.++..-. + ..+.|..|+.
T Consensus 5 ~~C-~C~~~~~~~~MI~Cd~C~~W~H~~Cvgi~~~~~----------~-~~~~C~~C~~ 51 (52)
T 3o7a_A 5 VTC-FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNV----------P-EVFVCQKCRD 51 (52)
T ss_dssp BCS-TTCCBCTTCCEEECTTTCCEEETTTTTCCGGGC----------C-SSCCCHHHHT
T ss_pred eEE-EeCCcCCCCCEEEcCCCCccccccccCCCcccC----------C-CcEECcCCCC
Confidence 345 5787654 4899999999999999999986411 1 2467777753
No 273
>3mhs_A Ubiquitin carboxyl-terminal hydrolase 8; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3mhh_A 4fjc_A 4fk5_A 4fip_A 3m99_A
Probab=26.89 E-value=22 Score=37.65 Aligned_cols=55 Identities=22% Similarity=0.401 Sum_probs=35.4
Q ss_pred ccccccCCCCCceeecCCCCcccccccCCCCcceee---CCeeeEecCCCCcccccccccc
Q 005824 511 HCHACARPADGFVYHCEEKGRNLHPCCFNLPRKLAI---GSVEFVLSDKELSQECIWCESK 568 (675)
Q Consensus 511 ~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~lp~~i~~---~~h~~~l~~~~~~~~C~~C~~~ 568 (675)
.|..|......-.|-|..|+ |..|-....-..| .+|++.+.......+|..|...
T Consensus 50 ~C~~c~~~~~~~~~~cl~cg---~~~c~~~~h~~~H~~~~~h~~~~~~~~~~~~c~~~~~~ 107 (476)
T 3mhs_A 50 KCGTCHEINSGATFMCLQCG---FCGCWNHSHFLSHSKQIGHIFGINSNNGLLFCFKCEDY 107 (476)
T ss_dssp BCTTTCCBCSSSEEEESSSS---CEEETTTTHHHHHHHHHCCCEEEETTTCCEEETTTTEE
T ss_pred CcccccCCCCCCceEeCCCC---CCccCCchHHHHHhcccCCcEEEECCCCcEEeCCCCCC
Confidence 48888776546789999999 6667653333334 4788777544444456555543
No 274
>3nis_A E3 ubiquitin-protein ligase UBR1; E3 ubiquitin ligase, UBR BOX, zinc-binding protein, N-END RU ligase, metal binding protein; 1.68A {Saccharomyces cerevisiae} PDB: 3nii_A 3nij_A 3nih_A 3nik_A 3nim_A 3nin_A 3nil_A 3nit_A
Probab=26.70 E-value=62 Score=24.97 Aligned_cols=55 Identities=18% Similarity=0.245 Sum_probs=31.5
Q ss_pred cccCC--CCCceeecCCCCcc-cccccCCCCcceeeCCeeeEecCC--CCccccccccccc
Q 005824 514 ACARP--ADGFVYHCEEKGRN-LHPCCFNLPRKLAIGSVEFVLSDK--ELSQECIWCESKR 569 (675)
Q Consensus 514 ~C~~~--~~g~~Y~C~~C~f~-lH~~Ca~lp~~i~~~~h~~~l~~~--~~~~~C~~C~~~~ 569 (675)
+|++. ...++|+|..|.++ .+..|..=-..=.|.+|.+..... .....|+ |+...
T Consensus 10 ~Cg~vf~~ge~~Y~C~~C~~d~tcvlC~~CF~~s~H~gH~~~~~~s~~~~gG~CD-CGD~e 69 (82)
T 3nis_A 10 NCGRKFKIGEPLYRCHECGCDDTCVLCIHCFNPKDHVNHHVCTDICTEFTSGICD-CGDEE 69 (82)
T ss_dssp CCCCBCCTTCEEEEETTTBSSTTCCBCTTTCCGGGGTTSCEEEEECCSSEEEBCC-TTCGG
T ss_pred CCCCcccCCCEEEEeeccCCCCCceEchhhCCCCCcCCceEEEEEecCCCCcEec-CCCHH
Confidence 45653 35679999999864 222333333444567888776533 2223444 77653
No 275
>2ehe_A Four and A half LIM domains 3; FHL-3, skeletal muscle LIM- protein 2, SLIM 2, FHL3, SLIM2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.62 E-value=1.7e+02 Score=21.89 Aligned_cols=11 Identities=27% Similarity=0.661 Sum_probs=6.5
Q ss_pred cccccccCCCC
Q 005824 510 KHCHACARPAD 520 (675)
Q Consensus 510 ~~C~~C~~~~~ 520 (675)
|.|..|++...
T Consensus 44 F~C~~C~~~L~ 54 (82)
T 2ehe_A 44 FRCCRCQRSLA 54 (82)
T ss_dssp SBCTTTCCBCS
T ss_pred CeecCCCCccC
Confidence 45666766543
No 276
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.54 E-value=70 Score=24.31 Aligned_cols=31 Identities=26% Similarity=0.583 Sum_probs=24.3
Q ss_pred cCCcccCCC-CCCcccccCCCceecccccccC
Q 005824 445 ECNGCKRPA-FGLMYRCELCNFNLHIPCMFID 475 (675)
Q Consensus 445 ~C~~C~~~~-~g~~Y~C~~C~f~lH~~Ca~~~ 475 (675)
.|..|+... .+..-.|..|+-.+|..|...|
T Consensus 28 ~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~Pp 59 (77)
T 2e6s_A 28 SCRVCGGKHEPNMQLLCDECNVAYHIYCLNPP 59 (77)
T ss_dssp SCSSSCCCCCSTTEEECSSSCCEEETTSSSSC
T ss_pred CCcCcCCcCCCCCEEEcCCCCccccccccCCC
Confidence 578888764 4566889999999999997643
No 277
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=26.36 E-value=26 Score=33.30 Aligned_cols=33 Identities=15% Similarity=0.189 Sum_probs=27.0
Q ss_pred cccccccccccccCCCCCCCCeEEeecCCCeeEeccchHHHH
Q 005824 559 SQECIWCESKRLQGSASDNWGWSYVSKCNNYHCHAFCSTEML 600 (675)
Q Consensus 559 ~~~C~~C~~~~~~~~~~~~~~w~Y~c~~c~~~lH~~C~~~~~ 600 (675)
-..|..|..-. .+-.+|..|+..+|..|+.+..
T Consensus 180 i~~C~iC~~iv---------~~g~~C~~C~~~~H~~C~~~~~ 212 (238)
T 3nw0_A 180 VKICNICHSLL---------IQGQSCETCGIRMHLPCVAKYF 212 (238)
T ss_dssp CCBCTTTCSBC---------SSCEECSSSCCEECHHHHHHHT
T ss_pred CCcCcchhhHH---------hCCcccCccChHHHHHHHHHHH
Confidence 45799999875 3568998899999999998753
No 278
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=26.31 E-value=27 Score=34.17 Aligned_cols=43 Identities=14% Similarity=0.076 Sum_probs=28.8
Q ss_pred CccEEEEecCCcChHHHHHHHHHhcCC--CcccccCCchhhHHhHHHHHH
Q 005824 334 RVDDVVIVGGSARIPKVQQLLQEFFNG--KRLCQNINPDEAVAYGAAVQA 381 (675)
Q Consensus 334 ~i~~VvLvGG~s~~p~l~~~l~~~~~~--~~v~~~~~p~~ava~Gaa~~a 381 (675)
+++.|+|.||.+.. +.+.|++.+.. .++. .+..+.+.||++++
T Consensus 232 ~p~~vvlgGGv~~~--l~~~l~~~l~~~~~~i~---~~~~a~~~GAa~la 276 (291)
T 1zxo_A 232 KQYPVHFIGSIAYC--YKEILQDAARQTGIQIG---KILQSPMEGLIQYH 276 (291)
T ss_dssp TTSCEEECSHHHHH--THHHHHHHTTTTTCCEE---EECSCTHHHHHTTS
T ss_pred CCceEEEECcHHHH--HHHHHHHHHhcCCcEEe---ecCCCHHHHHHHHH
Confidence 56789998988765 66777777633 1222 34567788888765
No 279
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=25.54 E-value=41 Score=33.61 Aligned_cols=37 Identities=16% Similarity=0.228 Sum_probs=16.1
Q ss_pred EEEEecccccEEEEEEE-CCe--EEEE--ecCCCCcccceEE
Q 005824 9 GIGIDLGTTYSCVGVWQ-HNR--VEII--ANDQGNRTTPSYV 45 (675)
Q Consensus 9 viGID~GTt~s~va~~~-~g~--~~~l--~~~~g~~~~PS~v 45 (675)
+||+|+|..|+|++... +|. +..+ +.|.+...++..+
T Consensus 2 iiG~DIGGAn~K~a~~~~~g~~~~~~~~~PlW~~~~~L~~~l 43 (334)
T 3cet_A 2 ILGIDIGGANTKITELHENGEFKVHHLYFPMWKNNDKLAEVL 43 (334)
T ss_dssp EEEEEEC--CEEEEEECSTTCCEEEEC---------------
T ss_pred eeEEEecccceeeeeecCCCceEEEEEecCCcCCchHHHHHH
Confidence 68999999999998865 454 3322 4566655555544
No 280
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=25.51 E-value=26 Score=27.52 Aligned_cols=34 Identities=21% Similarity=0.542 Sum_probs=26.5
Q ss_pred cCccCCcccCCCC---CCcccccCCCceecccccccC
Q 005824 442 ILSECNGCKRPAF---GLMYRCELCNFNLHIPCMFID 475 (675)
Q Consensus 442 ~~~~C~~C~~~~~---g~~Y~C~~C~f~lH~~Ca~~~ 475 (675)
....|..|...++ +..-.|..|+--+|..|...|
T Consensus 24 ~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~ 60 (88)
T 2l43_A 24 EDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVP 60 (88)
T ss_dssp CCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCS
T ss_pred CCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCC
Confidence 3456999987652 356889999999999998654
No 281
>2lo3_A SAGA-associated factor 73; zinc-finger, deubiquitination, transcription factor, SAGA CO transcription; NMR {Saccharomyces cerevisiae}
Probab=25.43 E-value=12 Score=24.48 Aligned_cols=10 Identities=30% Similarity=1.109 Sum_probs=9.0
Q ss_pred cccccccCCC
Q 005824 510 KHCHACARPA 519 (675)
Q Consensus 510 ~~C~~C~~~~ 519 (675)
+.|+.||+++
T Consensus 18 RvC~~CgkPi 27 (44)
T 2lo3_A 18 RVCEKCGKPL 27 (44)
T ss_dssp EECTTTCCEE
T ss_pred hhhcccCCcc
Confidence 7899999986
No 282
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=25.14 E-value=19 Score=32.31 Aligned_cols=51 Identities=22% Similarity=0.425 Sum_probs=38.5
Q ss_pred ccccccccCCC--CCceeecCCCCcccccccCCCCcceeeCCeeeEecCCCCccccccccccc
Q 005824 509 NKHCHACARPA--DGFVYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCESKR 569 (675)
Q Consensus 509 ~~~C~~C~~~~--~g~~Y~C~~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~~~ 569 (675)
..+| .|+++. .++.-.|..|+--.|..|+.++.... .....+.|..|....
T Consensus 8 ~~~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~---------~~~~~~~C~~C~~~~ 60 (174)
T 2ri7_A 8 KLYC-ICKTPEDESKFYIGCDRCQNWYHGRCVGILQSEA---------ELIDEYVCPQCQSTE 60 (174)
T ss_dssp CEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHH---------TTCSSCCCHHHHHHH
T ss_pred CcEe-eCCCCCCCCCCEeECCCCCchhChhhcCCchhhc---------cCccCeecCCCcchh
Confidence 3679 999864 67889999999999999998875321 112458899998753
No 283
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=25.12 E-value=48 Score=24.72 Aligned_cols=49 Identities=22% Similarity=0.436 Sum_probs=36.6
Q ss_pred cccccccCCC-CC-ceeecCCCCcccccccCCCCcceeeCCeeeEecCCCCccccccccccc
Q 005824 510 KHCHACARPA-DG-FVYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCESKR 569 (675)
Q Consensus 510 ~~C~~C~~~~-~g-~~Y~C~~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~~~ 569 (675)
.+| .|+++- .| +.-.|..|+-=.|..|+.++..-. ....+.|..|..+.
T Consensus 17 ~~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~~----------~~~~~~C~~C~~~~ 67 (72)
T 1wee_A 17 VDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADA----------LPSKFLCFRCIELS 67 (72)
T ss_dssp ECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSC----------CCSCCCCHHHHHHC
T ss_pred eEe-eCCCccCCCCcEEECCCCCCccCCeeeccCcccc----------CCCcEECCCccCCC
Confidence 679 699874 44 788999999999999999975311 11357899997653
No 284
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=24.86 E-value=76 Score=23.88 Aligned_cols=41 Identities=15% Similarity=0.243 Sum_probs=25.1
Q ss_pred cCccCCcccCCCCCCcccccCCCceecccccccCCcCccccCCCCCcceEE
Q 005824 442 ILSECNGCKRPAFGLMYRCELCNFNLHIPCMFIDRKPAAKHEFFGNSTFKS 492 (675)
Q Consensus 442 ~~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~~~~~~~~~h~~~~~~~l~~ 492 (675)
...+|..|+....-..|.|. |+.. .|+.. .+|-.|+++|-+
T Consensus 24 ~~nRC~~CrKkvgL~gf~Cr-Cg~~---FCs~H------Ry~e~H~C~fDy 64 (74)
T 1wfl_A 24 KKNRCFMCRKKVGLTGFDCR-CGNL---FCGLH------RYSDKHNCPYDY 64 (74)
T ss_dssp CTTBCSSSCCBCGGGCEECT-TSCE---ECSSS------CSTTTTTCCCCG
T ss_pred cCCcChhhCCcccccCeecC-CCCE---echhc------CCCccCCCcchh
Confidence 35679999987433349999 9844 46432 344455555543
No 285
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.73 E-value=53 Score=25.96 Aligned_cols=33 Identities=27% Similarity=0.529 Sum_probs=26.1
Q ss_pred CccCCcccCCCC-CCcccccCCCceecccccccC
Q 005824 443 LSECNGCKRPAF-GLMYRCELCNFNLHIPCMFID 475 (675)
Q Consensus 443 ~~~C~~C~~~~~-g~~Y~C~~C~f~lH~~Ca~~~ 475 (675)
...|..|..... +..-.|..|+--+|..|...|
T Consensus 16 ~~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Pp 49 (92)
T 2e6r_A 16 SYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPP 49 (92)
T ss_dssp CCCCSSSCCSGGGGGCEECTTTCCEECSSSSSSC
T ss_pred CCCCccCCCcCCCCCEEEcCCCCchhccccCCCC
Confidence 345999988763 457899999999999998643
No 286
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=24.54 E-value=37 Score=31.95 Aligned_cols=40 Identities=20% Similarity=0.355 Sum_probs=27.6
Q ss_pred HcCCceeEeeChhHHHHHHhccccCCCCCceEEEEEeCCCcEEEEEEE
Q 005824 168 MAGLNVLKIISEPTAAAIAYGLHRKASSEKNVLIFDLGGGTFDVSLLT 215 (675)
Q Consensus 168 ~Agl~~v~li~Ep~Aaa~~~~~~~~~~~~~~vlvvDiGggT~dvsv~~ 215 (675)
..|+ ++.+.++..|+|++.... ..++++-+|.| .-.+++.
T Consensus 90 ~~~~-pv~v~NDanaaalge~~~------~~~~~l~~GtG-iG~gii~ 129 (226)
T 3lm2_A 90 AFGR-PVRIVNDALMQAIGSYNG------GRMLFLGLGTG-LGAAMIV 129 (226)
T ss_dssp HHTS-CEEEEEHHHHHHHHHCCS------SEEEEEEESSS-EEEEEEE
T ss_pred hcCC-eEEEEEHHHHHHHHHhhc------CcEEEEEeCCc-eEEEEEE
Confidence 3466 578999999999876432 47888888876 4444443
No 287
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=24.49 E-value=35 Score=24.78 Aligned_cols=33 Identities=21% Similarity=0.500 Sum_probs=25.7
Q ss_pred cCccCCcccCCCCCCcccccCCC---ceecccccccC
Q 005824 442 ILSECNGCKRPAFGLMYRCELCN---FNLHIPCMFID 475 (675)
Q Consensus 442 ~~~~C~~C~~~~~g~~Y~C~~C~---f~lH~~Ca~~~ 475 (675)
....| .|..+..|.+=.|+.|| =-+|..|..++
T Consensus 10 e~~yC-~C~~~~~g~MI~CD~c~C~~~WfH~~Cvgl~ 45 (62)
T 2g6q_A 10 EPTYC-LCNQVSYGEMIGCDNEQCPIEWFHFSCVSLT 45 (62)
T ss_dssp CCEET-TTTEECCSEEEECSCTTCSSCEEETGGGTCS
T ss_pred CCcEE-ECCCCCCCCeeeeeCCCCCcccEecccCCcC
Confidence 45568 79888778778899955 57999998765
No 288
>3c5k_A HD6, histone deacetylase 6; HDAC6, zinc finger, actin-binding, chromatin regulator, cytoplasm, hydrolase, metal-binding, nucleus, phosphoprotein; 1.55A {Homo sapiens} PDB: 3gv4_A 3phd_A
Probab=24.24 E-value=28 Score=28.60 Aligned_cols=50 Identities=22% Similarity=0.350 Sum_probs=30.1
Q ss_pred cccccccCCCCCceeecCCCCcccccccCCCCcc--eee---CCeeeEecCCCCcccccc
Q 005824 510 KHCHACARPADGFVYHCEEKGRNLHPCCFNLPRK--LAI---GSVEFVLSDKELSQECIW 564 (675)
Q Consensus 510 ~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~lp~~--i~~---~~h~~~l~~~~~~~~C~~ 564 (675)
..|..|+.... .|-|..|++.. |-.-+.. ..| .+|++.+.......+|-.
T Consensus 25 ~~C~~C~~~~~--~W~CL~CG~vg---Cgr~~~~HA~~H~~~t~H~~~~~l~~~~vwCy~ 79 (109)
T 3c5k_A 25 QPCGDCGTIQE--NWVCLSCYQVY---CGRYINGHMLQHHGNSGHPLVLSYIDLSAWCYY 79 (109)
T ss_dssp CCCTTTCCCSS--EEEETTTCCEE---ECTTTTCHHHHHHHHHCCCEEEETTTCCEEETT
T ss_pred CcCccccCCCC--eeeeeecCccc---cCCCcChHHHHHhcccCCCEEEECCCCCEEECC
Confidence 45999998654 56799999766 6655521 122 367777654433333333
No 289
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=24.21 E-value=21 Score=25.75 Aligned_cols=29 Identities=21% Similarity=0.417 Sum_probs=20.7
Q ss_pred cccccccCCCC-CceeecCCCCcccccccC
Q 005824 510 KHCHACARPAD-GFVYHCEEKGRNLHPCCF 538 (675)
Q Consensus 510 ~~C~~C~~~~~-g~~Y~C~~C~f~lH~~Ca 538 (675)
+.|-+|..... .-.|+|..|...+..+|-
T Consensus 16 ~~C~~C~~~~~~~~~y~C~~C~~~FC~dCD 45 (59)
T 1z60_A 16 RFCYGCQGELKDQHVYVCAVCQNVFCVDCD 45 (59)
T ss_dssp CEETTTTEECTTSEEECCTTTTCCBCHHHH
T ss_pred CcccccCcccCCCccEECCccCcCcccchh
Confidence 45999988763 335999999876665554
No 290
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=24.02 E-value=37 Score=24.38 Aligned_cols=33 Identities=21% Similarity=0.487 Sum_probs=25.2
Q ss_pred cCccCCcccCCCCCCcccccCCC---ceecccccccC
Q 005824 442 ILSECNGCKRPAFGLMYRCELCN---FNLHIPCMFID 475 (675)
Q Consensus 442 ~~~~C~~C~~~~~g~~Y~C~~C~---f~lH~~Ca~~~ 475 (675)
....| .|+.+..|.+=.|..|| =-+|..|..++
T Consensus 9 e~~~C-~C~~~~~g~mi~CD~cdC~~~wfH~~Cvgl~ 44 (60)
T 2vnf_A 9 EPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVGLT 44 (60)
T ss_dssp CCEET-TTTEECCSEEEECSCTTCSSCEEETGGGTCS
T ss_pred CCCEE-ECCCcCCCCEEEeCCCCCCCceEehhcCCCC
Confidence 34568 79887778788899954 46999998765
No 291
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=23.99 E-value=95 Score=21.01 Aligned_cols=39 Identities=23% Similarity=0.130 Sum_probs=26.3
Q ss_pred cccccccccccccCCCCCCCCeEEeecCCCeeEeccchHHHHHHh
Q 005824 559 SQECIWCESKRLQGSASDNWGWSYVSKCNNYHCHAFCSTEMLLEN 603 (675)
Q Consensus 559 ~~~C~~C~~~~~~~~~~~~~~w~Y~c~~c~~~lH~~C~~~~~~~~ 603 (675)
...|.+|...... ..-......|+..+|..|+.+.....
T Consensus 5 ~~~C~IC~~~~~~------~~~~~~~~~CgH~fc~~Ci~~~~~~~ 43 (55)
T 2ecm_A 5 SSGCPICLEDIHT------SRVVAHVLPCGHLLHRTCYEEMLKEG 43 (55)
T ss_dssp CCSCTTTCCCCCT------TTSCEEECTTSCEEETTHHHHHHHHT
T ss_pred CCcCcccChhhcC------CCcCeEecCCCCcccHHHHHHHHHcC
Confidence 4579999875421 12234555699999999998875543
No 292
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=23.77 E-value=67 Score=23.95 Aligned_cols=33 Identities=24% Similarity=0.670 Sum_probs=26.0
Q ss_pred cCccCCcccCCCCCCcccccC--CCc-eecccccccC
Q 005824 442 ILSECNGCKRPAFGLMYRCEL--CNF-NLHIPCMFID 475 (675)
Q Consensus 442 ~~~~C~~C~~~~~g~~Y~C~~--C~f-~lH~~Ca~~~ 475 (675)
....| .|..+..|.+-.|.. |.. -+|..|..+.
T Consensus 15 ~~~~C-~C~~~~~g~MI~CD~~~C~~~wfH~~Cvgl~ 50 (71)
T 1wen_A 15 EPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVGLT 50 (71)
T ss_dssp SCCCS-TTCCCSCSSEECCSCSSCSCCCEETTTTTCS
T ss_pred CCCEE-ECCCCCCCCEeEeeCCCCCCccEecccCCcC
Confidence 45668 699887788889998 664 7999998765
No 293
>1twf_I B12.6, DNA-directed RNA polymerase II 14.2 kDa polypepti; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.3.1 g.41.3.1 PDB: 1i3q_I 1i6h_I 1k83_I* 1nik_I 1nt9_I 1pqv_I 1r5u_I 1r9s_I* 1r9t_I* 1sfo_I* 1twa_I* 1twc_I* 1i50_I* 1twg_I* 1twh_I* 1wcm_I 1y1v_I 1y1w_I 1y1y_I 1y77_I* ...
Probab=23.66 E-value=1.1e+02 Score=25.53 Aligned_cols=25 Identities=12% Similarity=0.478 Sum_probs=18.4
Q ss_pred cccccccCCC--------CCceeecCCCCcccc
Q 005824 510 KHCHACARPA--------DGFVYHCEEKGRNLH 534 (675)
Q Consensus 510 ~~C~~C~~~~--------~g~~Y~C~~C~f~lH 534 (675)
.+|.-||.-. ....|.|..|+|.-.
T Consensus 5 ~FCp~CgnlL~~~~~~~~~~~~~~C~~C~y~~~ 37 (122)
T 1twf_I 5 RFCRDCNNMLYPREDKENNRLLFECRTCSYVEE 37 (122)
T ss_dssp CBCSSSCCBCEEEEETTTTEEEEECSSSSCEEE
T ss_pred CcccccCccCcccccCcCCCCEEECCcCCCeee
Confidence 5688888733 246899999997554
No 294
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=23.62 E-value=72 Score=23.68 Aligned_cols=30 Identities=23% Similarity=0.555 Sum_probs=22.6
Q ss_pred CCcccCCC-CCCcccccCCCceecccccccC
Q 005824 446 CNGCKRPA-FGLMYRCELCNFNLHIPCMFID 475 (675)
Q Consensus 446 C~~C~~~~-~g~~Y~C~~C~f~lH~~Ca~~~ 475 (675)
|..|+... .+..-.|..|+-.+|..|...|
T Consensus 21 C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~Pp 51 (70)
T 3asl_A 21 CHLCGGRQDPDKQLMCDECDMAFHIYCLDPP 51 (70)
T ss_dssp BTTTCCCSCGGGEEECTTTCCEEEGGGSSSC
T ss_pred CcCCCCcCCCCCEEEcCCCCCceecccCCCC
Confidence 55667654 3456889999999999997643
No 295
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=23.57 E-value=44 Score=25.46 Aligned_cols=34 Identities=29% Similarity=0.608 Sum_probs=27.0
Q ss_pred ccCccCCcccCCC--CCCcccccCCCceecccccccC
Q 005824 441 KILSECNGCKRPA--FGLMYRCELCNFNLHIPCMFID 475 (675)
Q Consensus 441 ~~~~~C~~C~~~~--~g~~Y~C~~C~f~lH~~Ca~~~ 475 (675)
....+| .|..+. .+.+-.|+.|+-=+|..|..++
T Consensus 10 ~~~~~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~ 45 (79)
T 1wep_A 10 LVPVYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIE 45 (79)
T ss_dssp CCCCCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCC
T ss_pred CCccEE-EcCCccCCCCceEEcCCCCCcEEeeecCcc
Confidence 345567 788875 5677899999999999998765
No 296
>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2
Probab=23.29 E-value=27 Score=26.68 Aligned_cols=32 Identities=22% Similarity=0.433 Sum_probs=20.5
Q ss_pred ccccccccCCC------------CC-ceeecCCCC-------cccccccCCC
Q 005824 509 NKHCHACARPA------------DG-FVYHCEEKG-------RNLHPCCFNL 540 (675)
Q Consensus 509 ~~~C~~C~~~~------------~g-~~Y~C~~C~-------f~lH~~Ca~l 540 (675)
.|.|+.||+.+ .+ ..|.|.+|. +.-|-.|+.=
T Consensus 10 ~F~C~~Cgd~lKK~kv~~H~~~Cr~~~~~SCIDC~~~F~~~~y~~HtsCISE 61 (79)
T 1wjv_A 10 FFTCNACGESVKKIQVEKHVSNCRNCECLSCIDCGKDFWGDDYKSHVKCISE 61 (79)
T ss_dssp EEEESSSCCEEETTHHHHHHHHCTTCCEEEETTTTEEEEGGGTTTCCCCCSC
T ss_pred EEEcCCCCCeeecccchhHHhhCCCCCcEEecccCCeeCCCCEeCEeeeCCh
Confidence 38899999854 33 367777776 2345555543
No 297
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=23.04 E-value=1e+02 Score=30.26 Aligned_cols=48 Identities=19% Similarity=0.156 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCccEEEEecCCcChHHHHHHHHHhc
Q 005824 308 ELNMDLFRKCIKHVDMCLRNGKMDKSRVDDVVIVGGSARIPKVQQLLQEFF 358 (675)
Q Consensus 308 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~ 358 (675)
++++...+.+.+.++++|++++++.++|+.|+.-|++.+ +-+.+.+.|
T Consensus 211 ~~~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~---~~d~i~~~l 258 (317)
T 1hnj_A 211 EVFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLR---IISATAKKL 258 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHH---HHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH---HHHHHHHHc
Confidence 344455667788999999999999999999999888765 356788888
No 298
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=22.97 E-value=59 Score=31.53 Aligned_cols=21 Identities=19% Similarity=0.218 Sum_probs=18.2
Q ss_pred cEEEEecccccEEEEEEE-CCe
Q 005824 8 LGIGIDLGTTYSCVGVWQ-HNR 28 (675)
Q Consensus 8 ~viGID~GTt~s~va~~~-~g~ 28 (675)
-.+.||.|+|+++.++++ +++
T Consensus 24 M~L~IDiGNT~ik~g~~~~~~~ 45 (271)
T 2f9w_A 24 MILELDCGNSLIKWRVIEGAAR 45 (271)
T ss_dssp EEEEEEECSSCEEEEEEETTTE
T ss_pred cEEEEEeCCCeeEEEEEeCCCE
Confidence 469999999999999998 554
No 299
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=22.94 E-value=22 Score=28.22 Aligned_cols=39 Identities=21% Similarity=0.404 Sum_probs=22.4
Q ss_pred ccceecccc--cCccCCcccCCC--CCCcccccCC--Cceecccc
Q 005824 433 HDLQLKNHK--ILSECNGCKRPA--FGLMYRCELC--NFNLHIPC 471 (675)
Q Consensus 433 H~l~l~~~~--~~~~C~~C~~~~--~g~~Y~C~~C--~f~lH~~C 471 (675)
|.--|.... ..-.|-.|..+. .|..|+|+.| +|.+...|
T Consensus 20 ~~~~~~~~~~~M~~~CP~Cq~eL~~~g~~~hC~~C~~~f~~~a~C 64 (101)
T 2jne_A 20 HSSGLVPRGSHMELHCPQCQHVLDQDNGHARCRSCGEFIEMKALC 64 (101)
T ss_dssp -----------CCCBCSSSCSBEEEETTEEEETTTCCEEEEEEEC
T ss_pred cccccccCcccccccCccCCCcceecCCEEECccccchhhccccC
Confidence 444454332 345699998774 3556889999 57777777
No 300
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=22.92 E-value=47 Score=22.92 Aligned_cols=23 Identities=26% Similarity=0.590 Sum_probs=15.9
Q ss_pred cccccccCCC----CCceeecCCCCcc
Q 005824 510 KHCHACARPA----DGFVYHCEEKGRN 532 (675)
Q Consensus 510 ~~C~~C~~~~----~g~~Y~C~~C~f~ 532 (675)
+.|..||..+ ..-.++|..|+|.
T Consensus 20 k~CP~CG~~~fm~~~~~R~~C~kCG~t 46 (50)
T 3j20_Y 20 KFCPRCGPGVFMADHGDRWACGKCGYT 46 (50)
T ss_dssp EECSSSCSSCEEEECSSEEECSSSCCE
T ss_pred ccCCCCCCceEEecCCCeEECCCCCCE
Confidence 5688888743 3346788888864
No 301
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=22.73 E-value=32 Score=25.22 Aligned_cols=34 Identities=21% Similarity=0.437 Sum_probs=28.3
Q ss_pred cccccccCCC--CCceeecC-CCCcccccccCCCCcc
Q 005824 510 KHCHACARPA--DGFVYHCE-EKGRNLHPCCFNLPRK 543 (675)
Q Consensus 510 ~~C~~C~~~~--~g~~Y~C~-~C~f~lH~~Ca~lp~~ 543 (675)
..|-.|+++. ..+.-.|. .|+-=.|..|+.|...
T Consensus 9 ~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvglt~~ 45 (65)
T 2vpb_A 9 YPCGICTNEVNDDQDAILCEASCQKWFHRICTGMTET 45 (65)
T ss_dssp CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHTCCHH
T ss_pred CcCccCCCccCCCCCeEecccCccccCchhccCCCHH
Confidence 5699999974 45677899 9998899999999853
No 302
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.47 E-value=64 Score=24.87 Aligned_cols=33 Identities=18% Similarity=0.488 Sum_probs=25.5
Q ss_pred cCccCCcccCCC--CCCcccccCCCceeccccccc
Q 005824 442 ILSECNGCKRPA--FGLMYRCELCNFNLHIPCMFI 474 (675)
Q Consensus 442 ~~~~C~~C~~~~--~g~~Y~C~~C~f~lH~~Ca~~ 474 (675)
....|..|..+- +....+|..|.-.+...|...
T Consensus 13 ~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~ 47 (84)
T 1x4u_A 13 NFGNCTGCSATFSVLKKRRSCSNCGNSFCSRCCSF 47 (84)
T ss_dssp CCSSCSSSCCCCCSSSCCEECSSSCCEECTTTSCE
T ss_pred CCCcCcCcCCccccchhhhhhcCCCcEEChhhcCC
Confidence 345699998873 334599999999999999643
No 303
>3lwd_A 6-phosphogluconolactonase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; 1.75A {Chromohalobacter salexigens}
Probab=22.39 E-value=1.3e+02 Score=28.07 Aligned_cols=47 Identities=19% Similarity=0.187 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccEEEEecCCcChHHHHHHHH
Q 005824 304 ARFEELNMDLFRKCIKHVDMCLRNGKMDKSRVDDVVIVGGSARIPKVQQLLQ 355 (675)
Q Consensus 304 ~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~ 355 (675)
++-+++.+...+.|.+.+++.+... ..-.+.|.||++-.+..+..++
T Consensus 8 ~~~~~l~~~~A~~i~~~i~~~i~~~-----~~~~l~LsgGstp~~~y~~L~~ 54 (226)
T 3lwd_A 8 EGRQRLAERLADTVAQALEADLAKR-----ERALLVVSGGSTPKPFFTSLAA 54 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTS-----SCEEEEECCSSTTHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhC-----CCEEEEEcCCCCHHHHHHHHHh
Confidence 3445555666667777777777652 2357899999999887777664
No 304
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=22.17 E-value=42 Score=24.01 Aligned_cols=33 Identities=24% Similarity=0.659 Sum_probs=26.0
Q ss_pred cCccCCcccCCCCCCcccccC--CCc-eecccccccC
Q 005824 442 ILSECNGCKRPAFGLMYRCEL--CNF-NLHIPCMFID 475 (675)
Q Consensus 442 ~~~~C~~C~~~~~g~~Y~C~~--C~f-~lH~~Ca~~~ 475 (675)
....| .|..+..|.+=.|+. |.. -+|..|..++
T Consensus 8 e~~yC-~C~~~~~g~mi~CD~~~C~~~wfH~~Cvgl~ 43 (59)
T 3c6w_A 8 EPTYC-LCHQVSYGEMIGCDNPDCPIEWFHFACVDLT 43 (59)
T ss_dssp CCEET-TTTEECCSEEEECSCTTCSSCEEETGGGTCS
T ss_pred CCcEE-ECCCCCCCCeeEeeCCCCCCCCEecccCCcc
Confidence 45568 798887787889999 664 7999998765
No 305
>3h0g_I DNA-directed RNA polymerases I, II, and III subunit rpabc5; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=21.91 E-value=1.2e+02 Score=24.81 Aligned_cols=25 Identities=12% Similarity=0.219 Sum_probs=17.3
Q ss_pred cccccccCCC--------CCceeecCCCCcccc
Q 005824 510 KHCHACARPA--------DGFVYHCEEKGRNLH 534 (675)
Q Consensus 510 ~~C~~C~~~~--------~g~~Y~C~~C~f~lH 534 (675)
.+|.-||.-. ....|.|..|+|...
T Consensus 5 ~FCp~Cgn~L~~~~~~~~~~~~~~C~~C~y~~~ 37 (113)
T 3h0g_I 5 QYCIECNNMLYPREDKVDRVLRLACRNCDYSEI 37 (113)
T ss_dssp CCCSSSCCCCEECCCTTTCCCCEECSSSCCEEC
T ss_pred eeCcCCCCEeeEcccCCCCeeEEECCCCCCeEE
Confidence 5688887643 234799999997543
No 306
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=21.43 E-value=69 Score=32.73 Aligned_cols=20 Identities=15% Similarity=0.305 Sum_probs=18.2
Q ss_pred cEEEEecccccEEEEEEECC
Q 005824 8 LGIGIDLGTTYSCVGVWQHN 27 (675)
Q Consensus 8 ~viGID~GTt~s~va~~~~g 27 (675)
.++|||+|.|++++++.+.+
T Consensus 3 ~vlgidiGgt~ik~al~d~~ 22 (381)
T 1saz_A 3 RILTINPGSTSTKLSIFEDE 22 (381)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred eEEEEECCccceeEEEEecc
Confidence 68999999999999998765
No 307
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.40 E-value=43 Score=24.96 Aligned_cols=45 Identities=20% Similarity=0.426 Sum_probs=33.5
Q ss_pred cccccccCCCCCceeecCCCC---cccccccCCCCcceeeCCeeeEecCCCCccccccccc
Q 005824 510 KHCHACARPADGFVYHCEEKG---RNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCES 567 (675)
Q Consensus 510 ~~C~~C~~~~~g~~Y~C~~C~---f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~ 567 (675)
.+|- |++...|+.-.|..|+ --.|..|+.|+... ...+.|..|..
T Consensus 7 ~yC~-C~~~~~g~MI~CD~cdC~~~WfH~~Cvgl~~~p------------~~~w~Cp~C~~ 54 (70)
T 1x4i_A 7 GYCI-CNQVSYGEMVGCDNQDCPIEWFHYGCVGLTEAP------------KGKWYCPQCTA 54 (70)
T ss_dssp CCST-TSCCCCSSEECCSCTTCSCCCEEHHHHTCSSCC------------SSCCCCHHHHH
T ss_pred eEEE-cCCCCCCCEeEeCCCCCCccCCcccccccCcCC------------CCCEECCCCCc
Confidence 6685 9887788999999875 46899999987631 13467777754
No 308
>3t69_A Putative 2-dehydro-3-deoxygalactonokinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.55A {Sinorhizobium meliloti}
Probab=21.16 E-value=59 Score=32.45 Aligned_cols=48 Identities=25% Similarity=0.303 Sum_probs=36.2
Q ss_pred cEEEEecCCcChHHHHHHHHHhcCCCcccccCCchhhHHhHHHHHHHHHcC
Q 005824 336 DDVVIVGGSARIPKVQQLLQEFFNGKRLCQNINPDEAVAYGAAVQAAVLSG 386 (675)
Q Consensus 336 ~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 386 (675)
..|.|+|........+..|+. + |.++.. .+++.++..|....+..+.+
T Consensus 260 ~~V~LiG~~~L~~~Y~~AL~~-~-G~~~~~-~d~d~a~~~GL~~~a~~~~~ 307 (330)
T 3t69_A 260 DGVCLVGSGGLGTLYRTALES-Q-GLNVRA-VDADEAVRAGLSAAARAIWP 307 (330)
T ss_dssp CEEEEEECHHHHHHHHHHHHH-T-TCEEEE-EEHHHHHHHHHHHHHHHHSC
T ss_pred CeEEEEeCHHHHHHHHHHHHH-c-CCCcee-eCHHHHHHHHHHHHHHHHHH
Confidence 579999999888888888875 4 565543 37899999998877665544
No 309
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=20.73 E-value=4.6e+02 Score=26.06 Aligned_cols=70 Identities=16% Similarity=0.213 Sum_probs=45.6
Q ss_pred CCceEEEEEeCCCcEEEEEEEEeC-CEEEEEEE-cCCCCCcHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHH
Q 005824 195 SEKNVLIFDLGGGTFDVSLLTIGK-GIFKVKAT-AGDTHLGGEDFDNRMVNHFIQEFKRKKKKDISGSPRAVQRLTTACE 272 (675)
Q Consensus 195 ~~~~vlvvDiGggT~dvsv~~~~~-~~~~~l~~-~~~~~~GG~~id~~i~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e 272 (675)
....+.+||+|..++-+.|+++.+ +.++++.. .....+|-. ++.. -..++..+.+..+..+
T Consensus 14 ~~~~~A~IDiGSNsiRL~I~~~~~~~~~~~i~~~k~~vrLg~g-~~~~----------------g~ls~eai~r~~~aL~ 76 (343)
T 3cer_A 14 ESVTVAGIDCGTNSIRLKIARVDADGMHEVVPRILRVIRLGQD-VDKT----------------HRFADEALERAYVAAR 76 (343)
T ss_dssp CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEEECCCTTTT-HHHH----------------SSCCHHHHHHHHHHHH
T ss_pred CCCeEEEEEcccceeEeEEEEEcCCCCEEEEEEEEEEeeCCCC-cccc----------------CCcCHHHHHHHHHHHH
Confidence 456799999999999999999983 45655543 233445533 2210 1235677777777777
Q ss_pred HHHHHccCC
Q 005824 273 RAKRTLSST 281 (675)
Q Consensus 273 ~~K~~ls~~ 281 (675)
+.|..+...
T Consensus 77 ~f~~~~~~~ 85 (343)
T 3cer_A 77 EFAGVIAEH 85 (343)
T ss_dssp HHHHHHTTS
T ss_pred HHHHHHHHC
Confidence 777766543
No 310
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=20.73 E-value=65 Score=25.56 Aligned_cols=78 Identities=15% Similarity=0.204 Sum_probs=45.2
Q ss_pred cccccccCC-CCCceeecCCCCcccccccCCC--CcceeeCCeeeEecCC---CCcccccccccccccCCCCCCCCeEEe
Q 005824 510 KHCHACARP-ADGFVYHCEEKGRNLHPCCFNL--PRKLAIGSVEFVLSDK---ELSQECIWCESKRLQGSASDNWGWSYV 583 (675)
Q Consensus 510 ~~C~~C~~~-~~g~~Y~C~~C~f~lH~~Ca~l--p~~i~~~~h~~~l~~~---~~~~~C~~C~~~~~~~~~~~~~~w~Y~ 583 (675)
..|+.|... ....+-.|..|+..+...|... +.......|.+..... .....|..-.. ....|.
T Consensus 4 ~~C~~C~~~~~~~av~~C~~C~~~~C~~Cl~~~h~~~~~~~~h~l~~~~~~~~~~~~~C~~H~~----------e~l~~f 73 (101)
T 2jun_A 4 VLCQFCDQDPAQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHED----------EKVNMY 73 (101)
T ss_dssp CBCTTCCSSSCCBCCEEETTTTEEECHHHHHHHSCSCSSSTTCCBSSCCCSCCSSCCCCSSCSS----------SCCCEE
T ss_pred CCCcCCCCCCCCCceEECCcCChHHhHHHCHHHhccCCccCCCeeeccccccCccCCcCcCcCC----------CcceEE
Confidence 459999864 3445667999987777777642 2111113444432111 11223444422 235678
Q ss_pred ecCCCeeEeccchH
Q 005824 584 SKCNNYHCHAFCST 597 (675)
Q Consensus 584 c~~c~~~lH~~C~~ 597 (675)
|..|...+...|..
T Consensus 74 C~~~~~~iC~~C~~ 87 (101)
T 2jun_A 74 CVTDDQLICALCKL 87 (101)
T ss_dssp ETTTTEEECHHHHH
T ss_pred CCCCCCccchhcCC
Confidence 98999999999874
No 311
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=20.67 E-value=1.3e+02 Score=29.80 Aligned_cols=46 Identities=9% Similarity=0.009 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCccEEEEecCCcChHHHHHHHHHhc
Q 005824 310 NMDLFRKCIKHVDMCLRNGKMDKSRVDDVVIVGGSARIPKVQQLLQEFF 358 (675)
Q Consensus 310 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~ 358 (675)
++-..+.+.+.++++|++++++.++|+.|+.-+++.+ +-+.+.+.|
T Consensus 226 ~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~---~~d~i~~~l 271 (339)
T 1mzj_A 226 FRWAVADVVPAAREALEVAGLTVGDLVAFVPHQANLR---IIDVLVDRL 271 (339)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCGGGCSEEEECCSCHH---HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHH---HHHHHHHHh
Confidence 3345567788899999999999999999999887754 445677777
No 312
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=20.47 E-value=69 Score=24.96 Aligned_cols=28 Identities=14% Similarity=0.229 Sum_probs=25.0
Q ss_pred EEEEeCCCCCHHHHHHHHHHHHHcCCce
Q 005824 146 AVVTVPAYFTDSQRQATKDAGAMAGLNV 173 (675)
Q Consensus 146 ~vitvP~~~~~~~r~~l~~a~~~Agl~~ 173 (675)
-.++.|+.++..+|..+-+.|+..||..
T Consensus 34 ~~l~FP~sLs~~eR~~IH~lA~~~GL~h 61 (86)
T 1msz_A 34 MQLEFPPSLNSHDRLRVHQIAEEHGLRH 61 (86)
T ss_dssp SEEEECTTCCSHHHHHHHHHHHHTTEEE
T ss_pred cEEEcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 3678899999999999999999999854
No 313
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=20.37 E-value=45 Score=23.50 Aligned_cols=44 Identities=18% Similarity=0.184 Sum_probs=24.8
Q ss_pred eeecCCCCcccccccCCCCcceeeCCeeeEecCCCCccccccccccc
Q 005824 523 VYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCESKR 569 (675)
Q Consensus 523 ~Y~C~~C~f~lH~~Ca~lp~~i~~~~h~~~l~~~~~~~~C~~C~~~~ 569 (675)
.|+|..|+|-.++. ..-|..=.-.+.+|.-. ...+.|-.|+...
T Consensus 3 ~y~C~vCGyvYd~~-~Gdp~~gi~pGt~fe~l--P~dw~CP~Cg~~K 46 (54)
T 4rxn_A 3 KYTCTVCGYIYDPE-DGDPDDGVNPGTDFKDI--PDDWVCPLCGVGK 46 (54)
T ss_dssp CEEETTTCCEECTT-TCBGGGTBCTTCCGGGS--CTTCBCTTTCCBG
T ss_pred ceECCCCCeEECCC-cCCcccCcCCCCChhHC--CCCCcCcCCCCcH
Confidence 48999999877754 11221111134444332 2458899998753
No 314
>1dxg_A Desulforedoxin; non-heme iron protein, rubredoxin type metal center, electron transport; 1.80A {Desulfovibrio gigas} SCOP: g.41.5.2 PDB: 1dcd_A 1dhg_A 1cfw_A 2lk5_A 2lk6_A
Probab=20.37 E-value=36 Score=21.60 Aligned_cols=16 Identities=38% Similarity=0.918 Sum_probs=12.2
Q ss_pred CCcccccCCCceeccc
Q 005824 455 GLMYRCELCNFNLHIP 470 (675)
Q Consensus 455 g~~Y~C~~C~f~lH~~ 470 (675)
..+|+|+.|+..+-..
T Consensus 4 ~~fY~C~~CGnivev~ 19 (36)
T 1dxg_A 4 GDVYKCELCGQVVKVL 19 (36)
T ss_dssp TCEEECTTTCCEEEEE
T ss_pred ccEEEcCCCCcEEEEE
Confidence 4679999998776653
No 315
>1ovx_A ATP-dependent CLP protease ATP-binding subunit CL; treble CLEF zinc finger, homodimer, metal binding protein; NMR {Escherichia coli} SCOP: g.39.1.11
Probab=20.12 E-value=20 Score=26.53 Aligned_cols=32 Identities=28% Similarity=0.552 Sum_probs=14.5
Q ss_pred cccceeccc-ccCccCCcccCCC-------CCC-cccccCC
Q 005824 432 AHDLQLKNH-KILSECNGCKRPA-------FGL-MYRCELC 463 (675)
Q Consensus 432 ~H~l~l~~~-~~~~~C~~C~~~~-------~g~-~Y~C~~C 463 (675)
+|.-+..+. .....|+.|+..- .|+ .|-|+.|
T Consensus 6 ~~~~~~~~~~~~~~~CSFCGK~e~eV~~LIaGpgvyICdeC 46 (67)
T 1ovx_A 6 HHTDKRKDGSGKLLYCSFCGKSQHEVRKLIAGPSVYICDEC 46 (67)
T ss_dssp ------------CCCCTTTCCCTTTSSSEEECSSCEEEHHH
T ss_pred cccccccCCCCCCcEecCCCCCHHHHcccCCCCCCChhHHH
Confidence 355444432 2345799998762 344 3888776
Done!